##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##fileDate=20260419
##source=freeBayes v1.3.10
##reference=/home/jforment/biovice/species/Cucumis_melo/v4.0/Melon_v4.0_PacBio.fasta
##contig=<ID=chr00,length=121315>
##contig=<ID=chr01,length=35851181>
##contig=<ID=chr02,length=26959513>
##contig=<ID=chr03,length=29257379>
##contig=<ID=chr04,length=33099074>
##contig=<ID=chr05,length=29075199>
##contig=<ID=chr06,length=36141931>
##contig=<ID=chr07,length=26578138>
##contig=<ID=chr08,length=33443462>
##contig=<ID=chr09,length=23938830>
##contig=<ID=chr10,length=25300170>
##contig=<ID=chr11,length=31951622>
##contig=<ID=chr12,length=26139556>
##phasing=none
##commandline="freebayes --bam-list bamfiles.BC1.txt --fasta-reference /home/jforment/biovice/species/Cucumis_melo/v4.0/Melon_v4.0_PacBio.fasta --min-alternate-count 3 --min-mapping-quality 10 --min-base-quality 20 --min-coverage 3"
##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with data">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total read depth at the locus">
##INFO=<ID=DPB,Number=1,Type=Float,Description="Total read depth per bp at the locus; bases in reads overlapping / bases in haplotype">
##INFO=<ID=AC,Number=A,Type=Integer,Description="Total number of alternate alleles in called genotypes">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated allele frequency in the range (0,1]">
##INFO=<ID=RO,Number=1,Type=Integer,Description="Count of full observations of the reference haplotype.">
##INFO=<ID=AO,Number=A,Type=Integer,Description="Count of full observations of this alternate haplotype.">
##INFO=<ID=PRO,Number=1,Type=Float,Description="Reference allele observation count, with partial observations recorded fractionally">
##INFO=<ID=PAO,Number=A,Type=Float,Description="Alternate allele observations, with partial observations recorded fractionally">
##INFO=<ID=QR,Number=1,Type=Integer,Description="Reference allele quality sum in phred">
##INFO=<ID=QA,Number=A,Type=Integer,Description="Alternate allele quality sum in phred">
##INFO=<ID=PQR,Number=1,Type=Float,Description="Reference allele quality sum in phred for partial observations">
##INFO=<ID=PQA,Number=A,Type=Float,Description="Alternate allele quality sum in phred for partial observations">
##INFO=<ID=SRF,Number=1,Type=Integer,Description="Number of reference observations on the forward strand">
##INFO=<ID=SRR,Number=1,Type=Integer,Description="Number of reference observations on the reverse strand">
##INFO=<ID=SAF,Number=A,Type=Integer,Description="Number of alternate observations on the forward strand">
##INFO=<ID=SAR,Number=A,Type=Integer,Description="Number of alternate observations on the reverse strand">
##INFO=<ID=SRP,Number=1,Type=Float,Description="Strand balance probability for the reference allele: Phred-scaled upper-bounds estimate of the probability of observing the deviation between SRF and SRR given E(SRF/SRR) ~ 0.5, derived using Hoeffding's inequality">
##INFO=<ID=SAP,Number=A,Type=Float,Description="Strand balance probability for the alternate allele: Phred-scaled upper-bounds estimate of the probability of observing the deviation between SAF and SAR given E(SAF/SAR) ~ 0.5, derived using Hoeffding's inequality">
##INFO=<ID=AB,Number=A,Type=Float,Description="Allele balance at heterozygous sites: a number between 0 and 1 representing the ratio of reads showing the reference allele to all reads, considering only reads from individuals called as heterozygous">
##INFO=<ID=ABP,Number=A,Type=Float,Description="Allele balance probability at heterozygous sites: Phred-scaled upper-bounds estimate of the probability of observing the deviation between ABR and ABA given E(ABR/ABA) ~ 0.5, derived using Hoeffding's inequality">
##INFO=<ID=RUN,Number=A,Type=Integer,Description="Run length: the number of consecutive repeats of the alternate allele in the reference genome">
##INFO=<ID=RPP,Number=A,Type=Float,Description="Read Placement Probability: Phred-scaled upper-bounds estimate of the probability of observing the deviation between RPL and RPR given E(RPL/RPR) ~ 0.5, derived using Hoeffding's inequality">
##INFO=<ID=RPPR,Number=1,Type=Float,Description="Read Placement Probability for reference observations: Phred-scaled upper-bounds estimate of the probability of observing the deviation between RPL and RPR given E(RPL/RPR) ~ 0.5, derived using Hoeffding's inequality">
##INFO=<ID=RPL,Number=A,Type=Float,Description="Reads Placed Left: number of reads supporting the alternate balanced to the left (5') of the alternate allele">
##INFO=<ID=RPR,Number=A,Type=Float,Description="Reads Placed Right: number of reads supporting the alternate balanced to the right (3') of the alternate allele">
##INFO=<ID=EPP,Number=A,Type=Float,Description="End Placement Probability: Phred-scaled upper-bounds estimate of the probability of observing the deviation between EL and ER given E(EL/ER) ~ 0.5, derived using Hoeffding's inequality">
##INFO=<ID=EPPR,Number=1,Type=Float,Description="End Placement Probability for reference observations: Phred-scaled upper-bounds estimate of the probability of observing the deviation between EL and ER given E(EL/ER) ~ 0.5, derived using Hoeffding's inequality">
##INFO=<ID=DPRA,Number=A,Type=Float,Description="Alternate allele depth ratio.  Ratio between depth in samples with each called alternate allele and those without.">
##INFO=<ID=ODDS,Number=1,Type=Float,Description="The log odds ratio of the best genotype combination to the second-best.">
##INFO=<ID=GTI,Number=1,Type=Integer,Description="Number of genotyping iterations required to reach convergence or bailout.">
##INFO=<ID=TYPE,Number=A,Type=String,Description="The type of allele, either snp, mnp, ins, del, or complex.">
##INFO=<ID=CIGAR,Number=A,Type=String,Description="The extended CIGAR representation of each alternate allele, with the exception that '=' is replaced by 'M' to ease VCF parsing.  Note that INDEL alleles do not have the first matched base (which is provided by default, per the spec) referred to by the CIGAR.">
##INFO=<ID=NUMALT,Number=1,Type=Integer,Description="Number of unique non-reference alleles in called genotypes at this position.">
##INFO=<ID=MEANALT,Number=A,Type=Float,Description="Mean number of unique non-reference allele observations per sample with the corresponding alternate alleles.">
##INFO=<ID=LEN,Number=A,Type=Integer,Description="allele length">
##INFO=<ID=MQM,Number=A,Type=Float,Description="Mean mapping quality of observed alternate alleles">
##INFO=<ID=MQMR,Number=1,Type=Float,Description="Mean mapping quality of observed reference alleles">
##INFO=<ID=PAIRED,Number=A,Type=Float,Description="Proportion of observed alternate alleles which are supported by properly paired read fragments">
##INFO=<ID=PAIREDR,Number=1,Type=Float,Description="Proportion of observed reference alleles which are supported by properly paired read fragments">
##INFO=<ID=MIN_DP,Number=1,Type=Integer,Description="Minimum depth in gVCF output block.">
##INFO=<ID=END,Number=1,Type=Integer,Description="Last position (inclusive) in gVCF output record.">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Float,Description="Genotype Quality, the Phred-scaled marginal (or unconditional) probability of the called genotype">
##FORMAT=<ID=GL,Number=G,Type=Float,Description="Genotype Likelihood, log10-scaled likelihoods of the data given the called genotype for each possible genotype generated from the reference and alternate alleles given the sample ploidy">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Number of observation for each allele">
##FORMAT=<ID=RO,Number=1,Type=Integer,Description="Reference allele observation count">
##FORMAT=<ID=QR,Number=1,Type=Integer,Description="Sum of quality of the reference observations">
##FORMAT=<ID=AO,Number=A,Type=Integer,Description="Alternate allele observation count">
##FORMAT=<ID=QA,Number=A,Type=Integer,Description="Sum of quality of the alternate observations">
##FORMAT=<ID=MIN_DP,Number=1,Type=Integer,Description="Minimum depth in gVCF output block.">
##bcftools_viewVersion=1.23.1+htslib-1.23
##bcftools_viewCommand=view -S samples_order.BC1.v4.txt -Ov -o freebayes.BC1.v4.reordered.vcf freebayes.BC1.v4.vcf; Date=Mon Apr 20 12:09:48 2026
##SnpSiftVersion="SnpSift 5.4c (build 2026-02-23 07:25), by Pablo Cingolani"
##SnpSiftCmd="SnpSift Filter --file freebayes.BC1.v4.filter2.vcf.gz --exprfile /home/jforment/biovice/internal_projects/260313_cromero_mapping/00-rawdata/replicates_filter.expression.BC1.v4.txt"
##FILTER=<ID=SnpSift,Description="SnpSift 5.4c (build 2026-02-23 07:25), by Pablo Cingolani, Expression used: ((GEN['BC1-05_2019_A'].GT = GEN['BC1-05_2019_B'].GT) | (GEN['BC1-05_2019_A'].GT = '.') | (GEN['BC1-05_2019_B'].GT = '.')) & ((GEN['BC1-33_2019_A'].GT = GEN['BC1-33_2021_B'].GT) | (GEN['BC1-33_2019_A'].GT = '.') | (GEN['BC1-33_2021_B'].GT = '.')) & ((GEN['PAR_H_PxD_2021_A'].GT = GEN['PAR_H_PxD_2021_B'].GT) | (GEN['PAR_H_PxD_2021_A'].GT = '.') | (GEN['PAR_H_PxD_2021_B'].GT = '.')) & ((GEN['PAR_P2_D_2019_A'].GT = GEN['PAR_P2_D_2021_B'].GT) | (GEN['PAR_P2_D_2019_A'].GT = '.') | (GEN['PAR_P2_D_2021_B'].GT = '.'))">
##bcftools_filterVersion=1.23.1+htslib-1.23
##bcftools_filterCommand=filter --threads 50 --include 'F_PASS(GT[@/home/jforment/biovice/internal_projects/260313_cromero_mapping/00-rawdata/offspring_BC1.v4.txt]!='./.' & GT[@/home/jforment/biovice/internal_projects/260313_cromero_mapping/00-rawdata/offspring_BC1.v4.txt]!='.' & FORMAT/DP>=4) >= 0.95' freebayes.BC1.v4.filter3.vcf; Date=Wed Apr 29 19:24:14 2026
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	BC1-01_2019	BC1-02_2019	BC1-03_2019	BC1-04_2019	BC1-05_2019_A	BC1-05_2019_B	BC1-06_2019	BC1-07_2019	BC1-08_2019	BC1-09_2019	BC1-100_2021	BC1-101_2021	BC1-102_2021	BC1-103_2021	BC1-104_2021	BC1-105_2021	BC1-106_2021	BC1-107_2021	BC1-108_2021	BC1-10_2019	BC1-11_2019	BC1-12_2019	BC1-13_2019	BC1-14_2019	BC1-15_2019	BC1-16_2019	BC1-17_2019	BC1-18_2021	BC1-19_2019	BC1-20_2019	BC1-21_2019	BC1-22_2019	BC1-23_2019	BC1-24_2019	BC1-25_2019	BC1-26_2019	BC1-27_2021	BC1-28_2019	BC1-29_2021	BC1-30_2019	BC1-31_2019	BC1-32_2021	BC1-33_2019_A	BC1-33_2021_B	BC1-34_2021	BC1-35_2019	BC1-36_2019	BC1-37_2019	BC1-38_2019	BC1-39_2019	BC1-40_2019	BC1-41_2019	BC1-42_2019	BC1-43_2019	BC1-44_2019	BC1-45_2019	BC1-46_2019	BC1-47_2019	BC1-48_2019	BC1-49_2019	BC1-50_2021	BC1-51_2019	BC1-52_2019	BC1-53_2019	BC1-54_2019	BC1-55_2019	BC1-56_2019	BC1-57_2019	BC1-58_2021	BC1-65_2019	BC1-66_2021	BC1-67_2019	BC1-68_2019	BC1-69_2019	BC1-70_2019	BC1-71_2019	BC1-73_2019	BC1-74_2019	BC1-75_2019	BC1-76_2019	BC1-84_2019	BC1-85_2019	BC1-90_2021	BC1-93_2021	BC1-94_2021	BC1-95_2021	BC1-96_2021	BC1-97_2021	BC1-98_2021	BC1-99_2021	PAR_H_PxD_2021_A	PAR_H_PxD_2021_B	PAR_P2_D_2019_A	PAR_P2_D_2021_B
chr01	164078	.	T	G	205192	PASS	AB=0.554545;ABP=133.772;AC=149;AF=0.792553;AN=188;AO=9524;CIGAR=1X;DP=11788;DPB=11788;DPRA=0;EPP=20623.4;EPPR=4893.18;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9188;MQMR=59.8792;NS=94;NUMALT=1;ODDS=7.09127;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=340739;QR=81125;RO=2260;RPL=7;RPP=20623.4;RPPR=4893.18;RPR=9517;RUN=1;SAF=9524;SAP=20684.1;SAR=0;SRF=2260;SRP=4910.54;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:34:10,24:10:360:24:841:-65.7712,0,-22.5093	1/1:176:0,175:0:0:175:6253:-562.504,-52.6803,0	1/1:154:0,154:0:0:154:5494:-493.648,-46.3586,0	1/1:287:0,287:0:0:287:10261:-923.373,-86.3956,0	1/1:81:0,81:0:0:81:2908:-261.91,-24.3834,0	1/1:56:0,56:0:0:56:2000:-180.274,-16.8577,0	1/1:175:1,174:1:36:174:6212:-555.52,-49.082,0	1/1:216:0,216:0:0:216:7706:-693.573,-65.0225,0	1/1:76:0,76:0:0:76:2728:-245.746,-22.8783,0	1/1:56:0,56:0:0:56:2004:-180.634,-16.8577,0	1/1:115:0,115:0:0:115:4140:-372.781,-34.6185,0	0/1:72:38,34:38:1360:34:1224:-88.7929,0,-101.026	1/1:72:0,72:0:0:72:2580:-232.449,-21.6742,0	0/1:127:60,67:60:2152:67:2400:-178.025,0,-155.695	0/1:69:37,32:37:1332:32:1152:-83.2191,0,-99.4113	1/1:63:0,63:0:0:63:2264:-204.022,-18.9649,0	1/1:106:0,106:0:0:106:3807:-342.826,-31.9092,0	0/1:57:22,35:22:788:35:1251:-95.7356,0,-54.0861	1/1:52:0,52:0:0:52:1857:-167.408,-15.6536,0	1/1:256:0,256:0:0:256:9181:-826.255,-77.0637,0	0/1:174:89,85:89:3200:85:3048:-222.17,0,-235.843	0/1:153:106,47:106:3808:47:1692:-106.509,0,-296.83	1/1:148:0,148:0:0:148:5279:-475.242,-44.5524,0	0/1:126:47,79:47:1692:79:2825:-216.557,0,-114.447	1/1:89:0,89:0:0:89:3173:-284.938,-26.7917,0	1/1:377:1,376:1:36:376:13489:-1210.18,-109.89,0	0/1:198:86,112:86:3088:112:4020:-302.379,0,-218.539	1/1:41:0,41:0:0:41:1472:-132.689,-12.3422,0	1/1:363:1,362:1:36:362:12956:-1162.16,-105.676,0	1/1:231:2,228:2:72:228:8177:-729.054,-62.76,0	0/1:201:75,126:75:2681:126:4486:-343.401,0,-181.026	1/1:11:0,11:0:0:11:381:-34.6206,-3.31133,0	1/1:43:0,43:0:0:43:1548:-139.58,-12.9443,0	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/1:13:5,8:5:176:8:288:-22.354,0,-12.2716	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:202:0,202:0:0:202:7226:-650.331,-60.8081,0	0/1:251:100,151:100:3596:151:5382:-408.895,0,-248.277	1/1:115:0,115:0:0:115:4109:-369.941,-34.6185,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	0/1:282:118,164:118:4248:164:5804:-437.568,0,-297.112	1/1:56:0,56:0:0:56:2012:-181.353,-16.8577,0	1/1:187:0,187:0:0:187:6712:-604.153,-56.2926,0	1/1:70:0,70:0:0:70:2497:-224.981,-21.0721,0	0/1:63:36,27:36:1288:27:960:-67.7514,0,-97.2581	1/1:159:0,159:0:0:159:5696:-512.667,-47.8638,0	0/1:138:57,81:57:2044:81:2892:-218.759,0,-142.463	0/1:202:70,132:70:2512:132:4720:-364.139,0,-165.524	1/1:142:1,141:1:36:141:5031:-449.334,-39.148,0	0/1:174:46,127:46:1648:127:4560:-358.126,0,-96.1706	1/1:216:0,216:0:0:216:7711:-694.021,-65.0225,0	1/1:31:0,31:0:0:31:1112:-100.391,-9.33193,0	0/1:165:82,83:82:2948:83:2976:-218.402,0,-215.883	1/1:103:0,103:0:0:103:3693:-332.562,-31.0061,0	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	1/1:204:0,204:0:0:204:7301:-656.974,-61.4101,0	1/1:64:0,64:0:0:64:2300:-207.258,-19.2659,0	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	1/1:147:0,147:0:0:147:5200:-468.095,-44.2514,0	0/1:168:82,85:82:2940:85:3028:-222.117,0,-214.202	0/1:15:5,10:5:180:10:337:-26.1393,0,-12.0366	0/1:239:110,129:110:3948:129:4636:-345.455,0,-283.565	0/1:236:99,137:99:3564:137:4875:-367.857,0,-249.921	1/1:116:1,115:1:32:115:4113:-367.154,-31.7202,0	1/1:125:0,125:0:0:125:4492:-404.447,-37.6288,0	0/1:229:93,136:93:3328:136:4866:-369.157,0,-230.801	1/1:147:1,146:1:36:146:5244:-468.486,-40.6531,0	0/1:49:22,27:22:792:27:972:-73.0459,0,-56.8552	0/1:60:31,29:31:1116:29:1039:-75.7623,0,-82.6899	0/1:115:54,61:54:1940:61:2177:-161.575,0,-140.25	0/1:18:8,10:8:288:10:360:-27.3258,0,-20.8489	0/1:166:70,96:70:2504:96:3427:-258.67,0,-175.633	0/1:57:20,37:20:712:37:1328:-102.664,0,-47.2479	1/1:365:0,365:0:0:365:13056:-1174.84,-109.876,0	0/1:203:89,114:89:3200:114:4092:-307.355,0,-227.076	1/1:104:0,104:0:0:104:3710:-334.079,-31.3071,0	1/1:154:0,154:0:0:154:5495:-494.551,-46.3586,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	1/1:120:0,120:0:0:120:4301:-387.264,-36.1236,0	0/1:102:41,61:41:1472:61:2188:-166.481,0,-102.063	0/1:233:105,128:105:3760:128:4561:-340.516,0,-268.447	0/1:88:36,52:36:1296:52:1860:-141.189,0,-90.4533	1/1:57:0,57:0:0:57:2048:-184.587,-17.1587,0	0/1:93:42,51:42:1508:51:1834:-137.254,0,-107.159	0/1:142:81,61:81:2904:61:2181:-153.806,0,-218.849	1/1:44:0,44:0:0:44:1576:-142.132,-13.2453,0	1/1:97:0,97:0:0:97:3483:-313.68,-29.1999,0	1/1:80:0,80:0:0:80:2848:-256.512,-24.0824,0	0/1:73:44,29:44:1584:29:1040:-71.9392,0,-120.876	0/1:193:90,103:90:3236:103:3704:-275.449,0,-233.357	0/1:71:42,29:42:1504:29:1025:-71.1876,0,-114.279	1/1:136:0,136:0:0:136:4869:-438.359,-40.9401,0	1/1:96:0,96:0:0:96:3451:-310.797,-28.8989,0
chr01	164114	.	T	C	33616.9	PASS	AB=0.438782;ABP=163.328;AC=39;AF=0.207447;AN=188;AO=2167;CIGAR=1X;DP=11589;DPB=11589;DPRA=1.11173;EPP=4708.59;EPPR=20451.8;GTI=0;LEN=1;MEANALT=1.02273;MQM=59.9289;MQMR=59.9267;NS=94;NUMALT=1;ODDS=5.508;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76378;QR=336831;RO=9421;RPL=2167;RPP=4708.59;RPPR=20460.5;RPR=0;RUN=1;SAF=2167;SAP=4708.59;SAR=0;SRF=9420;SRP=20451.8;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:21,10:21:748:10:345:-22.0489,0,-58.3134	0/0:173:173,0:173:6174:0:0:0,-52.0782,-555.759	0/0:148:148,0:148:5280:0:0:0,-44.5524,-475.334	0/0:282:282,0:282:10097:0:0:0,-84.8905,-908.57	0/0:81:81,0:81:2891:0:0:0,-24.3834,-260.42	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/0:170:168,2:168:5989:2:72:0,-44.3384,-532.253	0/0:209:209,0:209:7481:0:0:0,-62.9153,-673.331	0/0:75:75,0:75:2678:0:0:0,-22.5772,-241.256	0/0:57:57,0:57:2027:0:0:0,-17.1587,-182.702	0/0:115:115,0:115:4123:0:0:0,-34.6184,-371.253	0/1:72:33,39:33:1184:39:1342:-99.4022,0,-85.1942	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/1:121:67,54:67:2392:54:1910:-135.749,0,-179.108	0/1:69:32,37:32:1143:37:1307:-97.1597,0,-82.4076	0/0:63:63,0:63:2239:0:0:0,-18.9649,-201.773	0/0:107:107,0:107:3773:0:0:0,-32.2102,-338.996	0/1:56:35,21:35:1256:21:726:-48.8008,0,-96.4876	0/0:52:52,0:52:1832:0:0:0,-15.6536,-165.158	0/0:254:254,0:254:9096:0:0:0,-76.4616,-818.526	0/1:161:83,78:83:2980:78:2699:-194.688,0,-219.966	0/1:148:46,102:46:1644:102:3617:-281.184,0,-103.696	0/0:147:147,0:147:5237:0:0:0,-44.2514,-471.466	0/1:123:79,44:79:2812:44:1565:-104.113,0,-216.291	0/0:88:88,0:88:3164:0:0:0,-26.4906,-284.128	0/0:371:371,0:371:13284:0:0:0,-111.682,-1195.34	0/1:190:113,77:113:4064:77:2703:-186.311,0,-308.745	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.464	0/0:363:363,0:363:13000:0:0:0,-109.274,-1169.72	0/0:227:226,1:226:8043:1:36:0,-64.7355,-720.198	0/1:196:123,73:123:4390:73:2578:-173.265,0,-336.271	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.863	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/1:13:8,5:8:288:5:176:-12.2716,0,-22.354	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:198:198,0:198:7094:0:0:0,-59.6039,-638.457	0/1:244:147,97:147:5276:97:3444:-236.72,0,-401.423	0/0:112:112,0:112:3986:0:0:0,-33.7154,-358.931	0/0:9:9,0:9:311:0:0:0,-2.70927,-28.3237	0/1:275:164,111:164:5871:111:3953:-273.178,0,-445.696	0/0:55:55,0:55:1964:0:0:0,-16.5566,-177.035	0/0:187:187,0:187:6703:0:0:0,-56.2926,-603.344	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/1:62:27,35:27:968:35:1206:-90.1733,0,-68.7735	0/0:157:157,0:157:5644:0:0:0,-47.2617,-508.075	0/1:131:79,52:79:2840:52:1852:-127.513,0,-216.133	0/1:196:129,67:129:4623:67:2378:-155.275,0,-357.217	0/0:145:144,1:144:5159:1:36:0,-40.0511,-460.851	0/1:172:128,44:128:4599:44:1553:-88.2834,0,-362.295	0/0:212:212,0:212:7599:0:0:0,-63.8184,-683.946	0/0:31:31,0:31:1093:0:0:0,-9.33193,-98.6777	0/1:165:83,82:83:2988:82:2895:-211.114,0,-219.481	0/0:102:102,0:102:3660:0:0:0,-30.7051,-329.539	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:206:206,0:206:7344:0:0:0,-62.0122,-660.846	0/0:66:66,0:66:2359:0:0:0,-19.868,-212.566	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/0:147:147,0:147:5247:0:0:0,-44.2514,-472.292	0/1:166:83,83:83:2963:83:2958:-216.481,0,-216.932	0/1:15:10,5:10:341:5:180:-12.0366,0,-26.5023	0/1:231:125,106:125:4496:106:3757:-268.793,0,-335.268	0/1:231:134,97:134:4807:97:3444:-240.635,0,-363.246	0/0:117:116,1:116:4150:1:36:0,-31.6222,-370.084	0/0:125:125,0:125:4462:0:0:0,-37.6287,-401.75	0/1:226:133,93:133:4767:93:3281:-227.476,0,-361.153	0/0:147:146,1:146:5227:1:36:0,-40.6531,-466.958	0/1:49:27,22:27:952:22:764:-54.3263,0,-71.2432	0/1:60:30,30:30:1080:30:1074:-78.911,0,-79.4515	0/1:113:60,53:60:2139:53:1855:-133.202,0,-158.761	0/1:17:10,7:10:351:7:252:-17.9114,0,-26.8092	0/1:162:96,66:96:3423:66:2310:-159.391,0,-259.514	0/1:57:37,20:37:1323:20:701:-46.253,0,-102.213	0/0:364:364,0:364:13023:0:0:0,-109.575,-1171.87	0/1:198:113,85:113:4015:85:3001:-210.632,0,-301.932	0/0:101:101,0:101:3594:0:0:0,-30.404,-323.646	0/0:152:152,0:152:5437:0:0:0,-45.7566,-489.25	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:121:121,0:121:4339:0:0:0,-36.4246,-390.684	0/1:100:61,39:61:2192:39:1383:-94.6569,0,-167.442	0/1:219:123,96:123:4407:96:3387:-239.113,0,-330.876	0/1:87:51,36:51:1816:36:1275:-88.8627,0,-137.532	0/0:56:56,0:56:2003:0:0:0,-16.8577,-180.538	0/1:94:50,43:50:1774:43:1477:-104.34,0,-131.69	0/1:138:59,79:59:2096:79:2806:-211.238,0,-147.366	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.844	0/0:97:97,0:97:3471:0:0:0,-29.1999,-312.601	0/0:79:79,0:79:2795:0:0:0,-23.7814,-251.747	0/1:71:28,43:28:996:43:1483:-112.385,0,-68.5818	0/1:187:102,85:102:3632:85:2948:-209.26,0,-270.784	0/1:68:27,41:27:964:41:1433:-108.791,0,-66.6068	0/0:133:133,0:133:4753:0:0:0,-40.037,-427.925	0/0:94:94,0:94:3339:0:0:0,-28.2968,-300.728
chr01	227710	.	A	G	77838.8	PASS	AB=0.492827;ABP=6.1878;AC=40;AF=0.212766;AN=188;AO=3521;CIGAR=1X;DP=16226;DPB=16226;DPRA=1.24202;EPP=7648.76;EPPR=27580.7;GTI=0;LEN=1;MEANALT=1.10417;MQM=59.9804;MQMR=59.8122;NS=94;NUMALT=1;ODDS=5.66971;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123336;QR=451906;RO=12700;RPL=1620;RPP=51.7072;RPPR=71.7376;RPR=1901;RUN=1;SAF=1620;SAP=51.7072;SAR=1901;SRF=6033;SRP=71.7376;SRR=6667;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:97:47,50:47:1647:50:1747:-128.311,0,-119.28	0/0:140:140,0:140:4987:0:0:0,-42.1442,-448.976	0/0:312:312,0:312:11072:0:0:0,-93.9214,-996.122	0/0:504:504,0:504:17932:0:0:0,-151.719,-1613.01	0/0:25:25,0:25:883:0:0:0,-7.52575,-79.7875	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/0:185:185,0:185:6564:0:0:0,-55.6905,-590.835	0/0:367:366,1:366:13018:1:36:0,-106.88,-1167.8	0/0:225:225,0:225:7965:0:0:0,-67.7317,-716.8	0/0:173:173,0:173:6167:0:0:0,-52.0782,-555.074	0/0:83:83,0:83:2940:0:0:0,-24.9855,-264.827	0/1:156:76,80:76:2681:80:2794:-204.668,0,-194.487	0/1:158:77,81:77:2756:81:2852:-209.356,0,-200.716	0/1:80:32,48:32:1140:48:1682:-127.582,0,-78.8186	0/1:124:65,59:65:2332:59:2059:-148.252,0,-172.805	0/0:87:87,0:87:3112:0:0:0,-26.1896,-280.291	0/0:65:65,0:65:2310:0:0:0,-19.5669,-208.158	0/1:83:38,45:38:1356:45:1583:-117.774,0,-97.3541	0/0:56:56,0:56:1999:0:0:0,-16.8577,-180.183	0/0:413:412,1:412:14681:1:36:0,-120.727,-1317.36	0/1:264:118,145:118:4167:145:5090:-378.818,0,-295.72	0/1:167:73,94:73:2594:94:3253:-242.721,0,-183.242	0/0:301:301,0:301:10717:0:0:0,-90.61,-964.419	0/1:81:56,25:56:1983:25:880:-55.1343,0,-154.352	0/0:135:135,0:135:4819:0:0:0,-40.639,-433.85	0/0:519:519,0:519:18460:0:0:0,-156.235,-1660.9	0/1:421:206,215:206:7345:215:7546:-552.456,0,-534.32	0/0:41:41,0:41:1451:0:0:0,-12.3422,-130.884	0/0:654:654,0:654:23359:0:0:0,-196.874,-2101.67	0/0:208:208,0:208:7430:0:0:0,-62.6142,-668.629	0/1:219:118,101:118:4181:101:3499:-249.195,0,-310.542	0/0:12:12,0:12:419:0:0:0,-3.61236,-38.0427	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:19:6,13:6:216:13:435:-33.7495,0,-14.0709	0/1:13:3,10:3:108:10:348:-27.7417,0,-6.16178	0/0:29:29,0:29:1025:0:0:0,-8.72987,-92.5607	0/0:282:281,1:281:9990:1:36:0,-81.2922,-895.403	0/1:180:85,95:85:3022:95:3299:-242.943,0,-217.973	0/0:60:60,0:60:2114:0:0:0,-18.0618,-190.454	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5354	0/1:244:134,110:134:4773:110:3810:-269.651,0,-356.269	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.454	0/0:360:360,0:360:12843:0:0:0,-108.371,-1154.82	0/0:82:82,0:82:2916:0:0:0,-24.6845,-262.666	0/1:92:57,35:57:2022:35:1195:-80.1536,0,-154.557	0/0:178:178,0:178:6331:0:0:0,-53.5833,-569.87	0/1:249:140,108:140:4973:108:3765:-264.182,0,-372.727	0/1:376:190,185:190:6759:185:6511:-472.966,0,-495.222	0/0:209:209,0:209:7478:0:0:0,-62.9153,-673.037	0/1:210:122,88:122:4343:88:3078:-214.033,0,-327.819	0/0:142:142,0:142:5058:0:0:0,-42.7463,-455.047	0/0:18:18,0:18:639:0:0:0,-5.41854,-57.8382	0/1:177:91,86:91:3212:86:3031:-219.738,0,-236.019	0/0:153:152,1:152:5422:1:36:0,-42.4593,-484.14	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:301:297,4:297:10534:4:131:0,-78.4966,-935.851	0/0:126:125,1:125:4471:1:36:0,-34.3315,-398.948	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2415	0/0:174:174,0:174:6129:0:0:0,-52.3792,-551.566	0/1:133:50,83:50:1787:83:2919:-222.908,0,-121.072	0/1:15:9,6:9:315:6:196:-13.4435,0,-24.1718	0/1:345:166,178:166:5899:178:6274:-460.989,0,-427.223	0/1:339:188,151:188:6668:151:5314:-376.35,0,-497.501	0/0:138:131,7:131:4684:7:248:0,-18.8779,-399.031	0/0:157:157,0:157:5564:0:0:0,-47.2617,-500.879	0/1:391:222,168:222:7878:168:5929:-415.963,0,-590.099	0/0:230:230,0:230:8201:0:0:0,-69.2369,-738.091	0/1:76:39,37:39:1383:37:1307:-95.0525,0,-100.506	0/1:126:70,56:70:2494:56:1956:-138.381,0,-186.781	0/1:63:29,34:29:1025:34:1203:-89.6101,0,-73.5958	0/1:42:19,23:19:676:23:806:-60.215,0,-48.5224	0/1:200:104,96:104:3680:96:3363:-242.683,0,-271.142	0/1:129:63,66:63:2256:66:2303:-168.695,0,-164.467	0/0:395:395,0:395:14082:0:0:0,-118.907,-1266.92	0/1:320:164,156:164:5865:156:5485:-397.451,0,-431.616	0/0:173:173,0:173:6164:0:0:0,-52.0782,-554.81	0/0:212:212,0:212:7595:0:0:0,-63.8184,-683.584	0/0:22:22,0:22:777:0:0:0,-6.62266,-70.2504	0/0:269:268,1:268:9542:1:36:0,-77.3788,-854.855	0/1:332:169,163:169:6024:163:5730:-415.881,0,-442.313	0/1:462:255,207:255:9061:207:7275:-515.737,0,-676.364	0/1:89:38,51:38:1347:51:1783:-133.957,0,-94.7378	0/0:118:118,0:118:4201:0:0:0,-35.5215,-378.263	0/1:85:40,45:40:1428:45:1573:-116.271,0,-103.23	0/1:210:96,114:96:3381:114:3984:-295.536,0,-241.275	0/0:40:40,0:40:1427:0:0:0,-12.0412,-128.718	0/0:105:105,0:105:3700:0:0:0,-31.6081,-333.199	0/0:128:128,0:128:4567:0:0:0,-38.5318,-411.193	0/1:65:32,33:32:1140:33:1136:-82.9742,0,-83.3155	0/1:131:67,64:67:2383:64:2250:-163.329,0,-175.09	0/1:147:47,100:47:1663:100:3498:-270.781,0,-105.619	0/0:210:210,0:210:7487:0:0:0,-63.2163,-673.669	0/0:163:163,0:163:5813:0:0:0,-49.0679,-523.277
chr01	426509	.	A	G	138648	PASS	AB=0.510014;ABP=6.66359;AC=145;AF=0.771277;AN=188;AO=6633;CIGAR=1X;DP=8699;DPB=8699;DPRA=0;EPP=14406.4;EPPR=4461.06;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9563;MQMR=59.9719;NS=94;NUMALT=1;ODDS=0.73912;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235347;QR=73200;RO=2061;RPL=6633;RPP=14406.4;RPPR=4461.06;RPR=0;RUN=1;SAF=6633;SAP=14406.4;SAR=0;SRF=2061;SRP=4478.41;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:23,40:23:812:40:1436:-110.519,0,-54.436	1/1:94:0,94:0:0:94:3359:-302.518,-28.2968,0	1/1:162:1,161:1:36:161:5744:-513.451,-45.1686,0	1/1:246:0,246:0:0:246:8730:-785.697,-74.0534,0	1/1:44:0,44:0:0:44:1576:-142.132,-13.2453,0	1/1:47:0,47:0:0:47:1675:-151.036,-14.1484,0	1/1:105:1,104:1:36:104:3679:-327.714,-28.0099,0	1/1:114:0,114:0:0:114:4029:-362.799,-34.3174,0	1/1:90:0,90:0:0:90:3144:-283.185,-27.0927,0	1/1:74:0,74:0:0:74:2640:-237.847,-22.2762,0	1/1:47:0,47:0:0:47:1631:-147.072,-14.1484,0	0/1:82:38,43:38:1344:43:1536:-113.79,0,-96.517	0/1:89:40,49:40:1416:49:1721:-128.382,0,-100.946	0/1:48:19,29:19:680:29:1004:-76.1966,0,-47.0797	0/1:67:27,40:27:955:40:1402:-106.307,0,-66.0958	1/1:60:1,59:1:36:59:2037:-180,-14.4635,0	1/1:24:0,24:0:0:24:856:-77.3435,-7.22472,0	0/1:37:19,18:19:680:18:640:-46.7912,0,-50.3911	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	1/1:153:0,153:0:0:153:5445:-490.18,-46.0576,0	0/1:189:97,92:97:3468:92:3283:-238.793,0,-255.438	0/1:127:84,43:84:2988:43:1536:-100.302,0,-230.923	1/1:110:0,110:0:0:110:3922:-353.172,-33.1133,0	0/1:73:24,49:24:845:49:1752:-135.989,0,-54.3919	1/1:78:0,78:0:0:78:2751:-247.832,-23.4803,0	1/1:187:0,185:0:0:185:6591:-592.912,-55.6906,0	0/1:302:132,170:132:4716:170:6049:-453.605,0,-333.69	1/1:32:0,32:0:0:32:1121:-101.196,-9.63296,0	1/1:289:0,289:0:0:289:10254:-922.787,-86.9977,0	1/1:173:1,172:1:36:172:6134:-548.56,-48.4799,0	0/1:119:61,58:61:2166:58:2080:-151.648,0,-159.383	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:12:8,4:8:280:4:144:-9.70126,0,-21.9269	1/1:24:0,24:0:0:24:847:-76.5479,-7.22472,0	0/1:204:91,113:91:3221:113:4011:-299.77,0,-228.703	0/1:162:89,73:89:3157:73:2583:-183.95,0,-235.584	1/1:36:0,36:0:0:36:1271:-114.692,-10.8371,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:133:48,85:48:1694:85:3021:-232.069,0,-112.708	1/1:37:0,37:0:0:37:1252:-112.974,-11.1381,0	1/1:187:0,187:0:0:187:6675:-600.827,-56.2926,0	1/1:59:0,59:0:0:59:2070:-186.567,-17.7608,0	0/1:56:25,31:25:891:31:1066:-79.3854,0,-63.0224	1/1:139:0,139:0:0:139:4939:-444.661,-41.8432,0	0/1:132:60,72:60:2144:72:2554:-190.375,0,-153.492	0/1:177:92,85:92:3263:85:3039:-220.457,0,-240.61	1/1:102:0,102:0:0:102:3624:-326.345,-30.7051,0	0/1:101:51,50:51:1820:50:1770:-129.178,0,-133.677	1/1:120:0,119:0:0:119:4223:-379.891,-35.8226,0	1/1:14:0,14:0:0:14:476:-43.1619,-4.21442,0	0/1:124:65,59:65:2287:59:2097:-151.64,0,-168.748	1/1:60:0,60:0:0:60:2137:-192.596,-18.0618,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:154:0,154:0:0:154:5486:-493.868,-46.3586,0	1/1:47:0,47:0:0:47:1657:-149.415,-14.1484,0	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:72:0,72:0:0:72:2580:-232.449,-21.6742,0	0/1:90:38,52:38:1344:52:1842:-138.966,0,-94.1674	0/1:7:2,5:2:72:5:176:-14.0778,0,-4.72951	0/1:150:62,88:62:2207:88:3135:-237.222,0,-153.74	0/1:186:103,83:103:3657:83:2937:-208.57,0,-273.343	1/1:53:2,51:2:72:51:1796:-155.082,-9.11787,0	1/1:84:1,83:1:36:83:2956:-262.673,-21.6882,0	0/1:157:91,66:91:3264:66:2338:-163.416,0,-246.718	1/1:181:0,181:0:0:181:6447:-580.313,-54.4864,0	0/1:29:14,15:14:500:15:540:-40.2067,0,-36.6063	0/1:59:31,28:31:1104:28:983:-71.0218,0,-81.9099	0/1:53:20,33:20:697:33:1151:-87.4478,0,-47.0961	0/1:12:8,4:8:280:4:144:-9.70126,0,-21.9269	0/1:151:91,60:91:3256:60:2128:-146.333,0,-247.802	0/1:135:78,57:78:2788:57:2040:-143.233,0,-210.522	1/1:157:0,157:0:0:157:5605:-504.571,-47.2617,0	0/1:124:71,53:71:2548:53:1895:-133.5,0,-192.243	1/1:93:0,93:0:0:93:3318:-298.743,-27.9958,0	1/1:75:0,75:0:0:75:2688:-242.156,-22.5773,0	1/1:18:0,18:0:0:18:630:-57.0246,-5.41854,0	1/1:91:0,90:0:0:90:3220:-289.663,-27.0927,0	0/1:97:48,49:48:1673:49:1735:-127.232,0,-121.655	0/1:177:75,102:75:2660:102:3643:-274.792,0,-186.36	0/1:75:31,44:31:1103:44:1545:-116.763,0,-77.0026	1/1:90:0,90:0:0:90:3161:-284.715,-27.0927,0	0/1:57:28,29:28:991:29:989:-72.155,0,-72.3448	0/1:124:61,63:61:2163:63:2215:-162.285,0,-157.609	1/1:23:0,23:0:0:23:787:-71.1452,-6.92369,0	1/1:76:0,76:0:0:76:2675:-240.993,-22.8783,0	1/1:78:0,78:0:0:78:2776:-250.082,-23.4803,0	0/1:22:8,14:8:288:14:491:-37.8985,0,-19.6447	0/1:90:41,49:41:1439:49:1723:-128.262,0,-102.712	0/1:79:49,30:49:1691:30:1059:-71.8391,0,-128.691	1/1:143:0,143:0:0:143:5097:-458.874,-43.0473,0	1/1:88:0,88:0:0:88:3079:-277.335,-26.4906,0
chr01	449623	.	A	G	226206	PASS	AB=0.472163;ABP=47.4989;AC=147;AF=0.781915;AN=188;AO=10846;CIGAR=1X;DP=14366;DPB=14366;DPRA=0;EPP=23546.1;EPPR=7549.04;GTI=0;LEN=1;MEANALT=1.11702;MQM=59.6974;MQMR=59.5304;NS=94;NUMALT=1;ODDS=3.22945;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=383699;QR=125539;RO=3507;RPL=10846;RPP=23554.8;RPPR=7549.04;RPR=0;RUN=1;SAF=1;SAP=23546.1;SAR=10845;SRF=0;SRP=7618.36;SRR=3507;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:41:0,41:0:0:41:1460:-131.696,-12.3422,0	1/1:314:0,313:0:0:313:11054:-994.371,-94.2224,0	1/1:186:1,185:1:36:185:6552:-586.02,-52.3933,0	1/1:408:0,408:0:0:408:14536:-1307.56,-122.82,0	1/1:81:0,81:0:0:81:2844:-256.148,-24.3834,0	1/1:62:0,62:0:0:62:2196:-197.906,-18.6639,0	1/1:206:0,205:0:0:205:7275:-653.655,-61.7112,0	1/1:226:0,225:0:0:225:7980:-717.712,-67.7318,0	1/1:111:0,110:0:0:110:3904:-351.272,-33.1133,0	1/1:207:0,207:0:0:207:7290:-656.076,-62.3132,0	1/1:77:0,77:0:0:77:2729:-245.752,-23.1793,0	0/1:89:49,40:49:1764:40:1428:-102.012,0,-129.781	0/1:65:37,28:37:1332:28:992:-70.0273,0,-100.588	0/1:80:41,39:41:1454:39:1370:-99.5146,0,-105.778	0/1:89:42,47:42:1512:47:1664:-123.232,0,-109.578	1/1:84:0,84:0:0:84:2991:-269.422,-25.2865,0	1/1:72:0,72:0:0:72:2554:-230.101,-21.6742,0	0/1:74:36,37:36:1292:37:1294:-94.4248,0,-94.2484	1/1:76:0,76:0:0:76:2688:-242.166,-22.8783,0	1/1:498:0,498:0:0:498:17571:-1580.85,-149.913,0	0/1:237:132,105:132:4712:105:3699:-261.69,0,-352.769	0/1:463:315,148:315:11263:148:5221:-330.657,0,-873.383	1/1:126:0,126:0:0:126:4468:-402.143,-37.9298,0	0/1:166:74,92:74:2644:92:3272:-244.622,0,-188.212	1/1:128:0,128:0:0:128:4527:-407.575,-38.5318,0	1/1:528:0,528:0:0:528:18608:-1673.19,-158.944,0	0/1:395:190,204:190:6797:204:7255:-533.863,0,-492.915	1/1:48:0,48:0:0:48:1699:-153.194,-14.4494,0	1/1:705:1,704:1:36:704:24905:-2236.78,-208.628,0	1/1:243:4,239:4:144:239:8490:-750.739,-59.8367,0	0/1:203:114,89:114:4092:89:3165:-223.966,0,-307.147	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	1/1:47:0,45:0:0:45:1573:-141.526,-13.5464,0	0/1:20:8,12:8:288:12:420:-32.1134,0,-20.2468	0/1:16:8,8:8:288:8:280:-19.4315,0,-21.4509	1/1:17:0,17:0:0:17:604:-54.6768,-5.11751,0	0/1:220:120,100:120:4312:100:3523:-251.052,0,-320.837	0/1:212:106,106:106:3796:106:3734:-271.127,0,-275.287	1/1:90:0,90:0:0:90:3192:-287.486,-27.0927,0	0/1:7:3,4:3:108:4:140:-10.8374,0,-7.96796	0/1:225:127,98:127:4531:98:3474:-245.072,0,-340.068	1/1:57:0,56:0:0:56:2003:-180.099,-16.8577,0	1/1:158:0,158:0:0:158:5572:-501.493,-47.5627,0	1/1:94:1,93:1:36:93:3307:-294.193,-24.6985,0	0/1:83:43,40:43:1548:40:1386:-100.047,0,-114.623	1/1:116:0,116:0:0:116:4095:-367.222,-34.9195,0	0/1:176:93,82:93:3336:82:2915:-209.642,0,-247.557	0/1:293:159,134:159:5685:134:4720:-336.714,0,-423.421	1/1:191:0,191:0:0:191:6725:-603.858,-57.4967,0	0/1:212:96,116:96:3444:116:4099:-305.192,0,-246.354	1/1:221:0,221:0:0:221:7846:-706.172,-66.5276,0	1/1:24:1,23:1:36:23:824:-70.885,-3.62645,0	0/1:232:131,101:131:4704:101:3578:-252.344,0,-353.636	1/1:52:0,52:0:0:52:1844:-166.187,-15.6536,0	1/1:41:1,40:1:36:40:1419:-124.18,-8.74396,0	1/1:164:4,160:4:144:160:5637:-493.965,-36.0553,0	1/1:110:0,110:0:0:110:3899:-350.969,-33.1133,0	1/1:31:0,31:0:0:31:1095:-98.8004,-9.33193,0	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	1/1:93:1,92:1:36:92:3262:-290.158,-24.3975,0	0/1:80:40,40:40:1427:40:1406:-101.428,0,-104.644	0/1:12:7,5:7:252:5:176:-12.5727,0,-19.4142	0/1:305:162,143:162:5799:143:5066:-364.208,0,-430.091	0/1:295:167,128:167:5975:128:4543:-320.223,0,-449.036	1/1:83:4,79:4:144:79:2800:-238.877,-11.6719,0	1/1:151:1,150:1:36:150:5307:-474.104,-41.8573,0	0/1:255:128,127:128:4561:127:4475:-326.006,0,-332.191	1/1:140:3,137:3:108:137:4841:-425.582,-32.069,0	0/1:23:10,13:10:356:13:468:-35.536,0,-24.2487	0/1:160:81,79:81:2904:79:2763:-200.7,0,-213.393	0/1:98:45,53:45:1607:53:1895:-141.326,0,-114.612	0/1:28:20,8:20:712:8:280:-17.1105,0,-54.7791	0/1:136:75,61:75:2680:61:2176:-155.069,0,-199.942	0/1:105:51,54:51:1828:54:1920:-141.466,0,-133.173	1/1:254:0,254:0:0:254:9018:-811.587,-76.4616,0	0/1:291:142,149:142:5092:149:5269:-386.687,0,-370.803	1/1:174:0,174:0:0:174:6057:-543.92,-52.3792,0	1/1:183:1,182:1:36:182:6397:-572.222,-51.4902,0	1/1:52:0,52:0:0:52:1835:-165.427,-15.6536,0	1/1:214:0,214:0:0:214:7593:-683.11,-64.4204,0	0/1:350:166,181:166:5948:181:6399:-471.155,0,-430.484	0/1:294:155,139:155:5572:139:4889:-351.63,0,-409.666	0/1:109:54,55:54:1936:55:1960:-143.71,0,-141.637	1/1:77:0,77:0:0:77:2756:-248.201,-23.1793,0	0/1:126:56,70:56:1991:70:2466:-184.14,0,-141.52	0/1:150:63,87:63:2252:87:3076:-231.91,0,-154.882	1/1:44:0,44:0:0:44:1576:-142.131,-13.2453,0	1/1:77:0,77:0:0:77:2719:-244.952,-23.1793,0	1/1:75:0,75:0:0:75:2667:-240.23,-22.5773,0	0/1:55:33,22:33:1161:22:792:-55.049,0,-88.2217	0/1:87:46,41:46:1640:41:1460:-105.493,0,-119.043	0/1:94:58,36:58:2084:36:1254:-84.8591,0,-159.529	1/1:127:0,127:0:0:127:4490:-404.271,-38.2308,0	1/1:128:1,127:1:32:127:4491:-400.347,-35.3325,0
chr01	1591891	.	A	T	98320.3	PASS	AB=0.500929;ABP=3.07483;AC=41;AF=0.218085;AN=188;AO=4334;CIGAR=1X;DP=18332;DPB=18332;DPRA=1.70333;EPP=9414.17;EPPR=30371.1;GTI=0;LEN=1;MEANALT=1.11111;MQM=54.9481;MQMR=59.7095;NS=94;NUMALT=1;ODDS=5.73866;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=154826;QR=495853;RO=13985;RPL=1892;RPP=154.572;RPPR=448.057;RPR=2442;RUN=1;SAF=1892;SAP=154.572;SAR=2442;SRF=6146;SRP=448.057;SRR=7839;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.967	0/1:189:107,82:107:3832:82:2944:-205.595,0,-288.108	0/0:209:209,0:209:7388:0:0:0,-62.9153,-664.888	0/0:581:578,0:578:20436:0:0:0,-173.995,-1838.14	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:25:25,0:25:891:0:0:0,-7.52575,-80.5088	0/0:168:168,0:168:5953:0:0:0,-50.573,-535.845	0/0:289:287,2:287:10127:2:64:0,-80.9481,-905.132	0/0:277:276,1:276:9746:1:36:0,-79.787,-873.379	0/0:296:296,0:296:10503:0:0:0,-89.1049,-945.161	0/0:69:69,0:69:2452:0:0:0,-20.7711,-220.83	0/1:211:106,105:106:3746:105:3748:-272.148,0,-273.816	0/1:162:82,80:82:2919:80:2842:-205.257,0,-214.154	0/1:98:50,48:50:1787:48:1708:-123.802,0,-131.611	0/1:141:65,76:65:2301:76:2695:-200.011,0,-164.899	0/0:127:127,0:127:4534:0:0:0,-38.2308,-408.216	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.46	0/1:52:26,26:26:928:26:932:-68.286,0,-68.1813	0/0:43:43,0:43:1532:0:0:0,-12.9443,-138.173	0/0:471:470,1:470:16678:1:36:0,-138.192,-1496.97	0/1:514:254,260:254:9000:260:9304:-680.519,0,-655.069	0/1:56:9,47:9:307:47:1675:-133.981,0,-11.1026	0/0:324:324,0:324:11528:0:0:0,-97.5337,-1036.71	0/1:159:95,64:95:3400:64:2284:-156.749,0,-258.341	0/0:77:77,0:77:2721:0:0:0,-23.1793,-245.121	0/0:651:651,0:651:23135:0:0:0,-195.971,-2080.11	0/1:523:256,267:256:9066:267:9522:-695.656,0,-658.327	0/0:90:90,0:90:3173:0:0:0,-27.0927,-285.796	0/0:735:734,1:734:26112:1:36:0,-217.662,-2345.62	0/0:336:335,1:335:11888:1:36:0,-97.5478,-1065.6	0/1:268:132,135:132:4689:135:4833:-353.488,0,-341.386	0/0:38:37,0:37:1294:0:0:0,-11.1381,-116.389	0/0:31:31,0:31:1107:0:0:0,-9.33193,-99.9402	0/1:10:6,4:6:212:4:144:-10.2311,0,-16.4145	0/1:8:4,4:4:144:4:144:-10.8609,0,-10.9054	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:383:185,198:185:6518:198:7097:-521.93,0,-471.4	0/1:177:91,86:91:3210:86:3062:-220.317,0,-235.774	0/0:77:77,0:77:2725:0:0:0,-23.1793,-245.48	0/1:11:9,2:9:324:2:72:-3.50299,0,-26.1945	0/1:351:171,180:171:6069:180:6452:-471.876,0,-440.625	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.257	0/0:67:67,0:67:2360:0:0:0,-20.169,-212.636	0/0:146:146,0:146:5175:0:0:0,-43.9504,-465.88	0/1:104:50,54:50:1753:54:1932:-142.656,0,-126.741	0/0:258:257,1:257:9122:1:36:0,-74.0712,-817.348	0/1:108:69,39:69:2438:39:1396:-92.603,0,-187.164	0/1:387:195,192:195:6905:192:6817:-493.864,0,-505.022	0/0:239:239,0:239:8446:0:0:0,-71.9462,-760.104	0/1:267:128,138:128:4527:138:4936:-362.666,0,-327.187	0/0:206:205,1:205:7288:1:36:0,-58.4139,-652.337	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/1:141:60,81:60:2143:81:2908:-218.141,0,-150.674	0/0:199:199,0:199:7073:0:0:0,-59.905,-636.599	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:308:308,0:308:10897:0:0:0,-92.7172,-978.565	0/0:87:86,1:86:3024:1:36:0,-22.5913,-268.014	0/0:21:21,0:21:743:0:0:0,-6.32163,-67.192	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:253:252,0:252:8945:0:0:0,-75.8596,-804.523	0/1:194:92,101:92:3296:101:3624:-267.231,0,-238.396	0/1:8:3,5:3:108:5:180:-14.0917,0,-7.66053	0/1:444:225,219:225:7978:219:7831:-570.52,0,-584.319	0/1:354:192,162:192:6837:162:5805:-414.804,0,-508.791	0/0:129:129,0:129:4572:0:0:0,-38.8329,-411.647	0/0:150:150,0:150:5287:0:0:0,-45.1545,-475.932	0/1:482:241,239:241:8548:239:8544:-620.93,0,-623.63	0/0:375:369,6:369:13079:6:216:0,-93.102,-1156.7	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.476	0/0:108:108,0:108:3815:0:0:0,-32.5112,-343.446	0/1:80:32,48:32:1152:48:1706:-129.534,0,-79.9077	0/1:45:35,10:35:1260:10:360:-19.1416,0,-100.146	0/1:245:124,121:124:4373:121:4319:-311.321,0,-319.957	0/1:214:110,104:110:3908:104:3701:-266.673,0,-287.424	0/0:449:448,1:448:15894:1:36:0,-131.576,-1426.36	0/1:344:180,164:180:6412:164:5859:-422.305,0,-473.56	0/0:28:27,1:27:936:1:36:0,-4.85007,-79.772	0/0:243:242,1:242:8546:1:36:0,-69.6018,-765.498	0/0:20:20,0:20:697:0:0:0,-6.0206,-63.0507	0/0:275:275,0:275:9743:0:0:0,-82.7832,-876.469	0/1:246:130,116:130:4587:116:4142:-296.312,0,-337.644	0/1:750:335,415:335:11898:415:14854:-1108.07,0,-842.17	0/1:114:55,58:55:1945:58:2078:-152.653,0,-140.936	0/1:118:55,63:55:1953:63:2256:-167.581,0,-140.295	0/1:101:51,50:51:1804:50:1788:-130.494,0,-132.232	0/1:276:158,117:158:5623:117:4126:-287.766,0,-423.034	0/1:50:27,23:27:954:23:820:-58.8895,0,-70.8946	0/0:140:139,0:139:4896:0:0:0,-41.8432,-440.546	0/0:139:139,0:139:4913:0:0:0,-41.8432,-442.233	0/0:37:37,0:37:1300:0:0:0,-11.1381,-117.288	0/1:94:56,38:56:1973:38:1360:-94.2077,0,-148.226	0/1:135:41,94:41:1459:94:3350:-260.423,0,-90.9477	0/0:408:407,1:407:14415:1:36:0,-119.222,-1293.25	0/0:235:235,0:235:8298:0:0:0,-70.742,-746.773
chr01	1691761	.	A	C	32731.7	PASS	AB=0.556511;ABP=96.5176;AC=42;AF=0.223404;AN=188;AO=1877;CIGAR=1X;DP=7052;DPB=7052;DPRA=1.11176;EPP=4001.07;EPPR=11123.4;GTI=1;LEN=1;MEANALT=1.04651;MQM=59.8796;MQMR=59.9926;NS=94;NUMALT=1;ODDS=1.48704;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66722;QR=182268;RO=5169;RPL=9;RPP=4001.07;RPPR=11123.4;RPR=1868;RUN=1;SAF=0;SAP=4078.86;SAR=1877;SRF=0;SRP=11227.4;SRR=5169;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:62:60,0:60:2083:0:0:0,-18.0618,-187.398	0/1:66:22,44:22:792:44:1556:-120.463,0,-51.7377	0/0:98:98,0:98:3479:0:0:0,-29.5009,-313.323	0/0:175:175,0:175:6139:0:0:0,-52.6802,-552.62	0/0:62:62,0:62:2159:0:0:0,-18.6639,-194.575	0/0:34:34,0:34:1198:0:0:0,-10.235,-108.124	0/0:59:59,0:59:2093:0:0:0,-17.7608,-188.638	0/0:119:119,0:119:4181:0:0:0,-35.8226,-376.478	0/0:191:191,0:191:6732:0:0:0,-57.4967,-605.964	0/0:83:83,0:83:2934:0:0:0,-24.9855,-264.267	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.132	0/1:99:45,54:45:1567:54:1932:-144.355,0,-111.515	0/1:59:33,26:33:1164:26:904:-63.6398,0,-87.3034	0/1:77:43,34:43:1540:34:1181:-83.3034,0,-115.714	0/1:47:20,27:20:704:27:968:-73.289,0,-49.5361	0/0:47:47,0:47:1656:0:0:0,-14.1484,-149.325	0/0:32:32,0:32:1118:0:0:0,-9.63296,-100.923	0/1:22:15,7:15:522:7:237:-15.0287,0,-40.6846	0/0:24:24,0:24:842:0:0:0,-7.22472,-76.0971	0/0:181:181,0:181:6403:0:0:0,-54.4864,-576.363	0/1:109:55,53:55:1908:53:1886:-137.186,0,-139.164	0/1:195:51,144:51:1794:144:5099:-400.355,0,-103.04	0/0:127:127,0:127:4494:0:0:0,-38.2308,-404.633	0/1:96:42,54:42:1452:54:1924:-144.538,0,-102.073	0/0:19:19,0:19:651:0:0:0,-5.71957,-58.91	0/0:199:198,0:198:7032:0:0:0,-59.6039,-632.587	0/1:131:52,79:52:1848:79:2802:-212.985,0,-127.165	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/0:202:202,0:202:7122:0:0:0,-60.8081,-641.05	0/0:152:152,0:152:5353:0:0:0,-45.7566,-481.909	0/1:122:53,69:53:1859:69:2455:-184.478,0,-130.863	0/0:9:9,0:9:315:0:0:0,-2.70927,-28.6872	0/0:17:17,0:17:594:0:0:0,-5.11751,-53.7856	0/1:15:8,7:8:284:7:243:-17.692,0,-21.3879	0/1:7:3,4:3:99:4:144:-11.2064,0,-7.12937	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:144:72,72:72:2561:72:2557:-187.031,0,-187.391	0/1:94:35,59:35:1239:59:2092:-160.204,0,-83.5168	0/0:43:43,0:43:1520:0:0:0,-12.9443,-137.09	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/1:85:26,59:26:924:59:2093:-163.046,0,-57.8901	0/0:22:22,0:22:773:0:0:0,-6.62266,-69.8895	0/0:159:159,0:159:5618:0:0:0,-47.8638,-505.747	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.203	0/1:44:22,22:22:775:22:766:-56.0131,0,-56.8259	0/0:151:151,0:151:5338:0:0:0,-45.4555,-480.56	0/1:72:24,48:24:855:48:1702:-131.789,0,-55.596	0/1:123:45,78:45:1616:78:2772:-212.696,0,-108.703	0/0:56:56,0:56:1981:0:0:0,-16.8577,-178.563	0/1:96:45,51:45:1571:51:1811:-134.372,0,-112.781	0/0:64:64,0:64:2251:0:0:0,-19.2659,-202.854	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:104:45,59:45:1592:59:2112:-159.042,0,-112.263	0/0:58:58,0:58:2038:0:0:0,-17.4597,-183.691	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:80:80,0:80:2815:0:0:0,-24.0824,-253.592	0/0:29:29,0:29:1017:0:0:0,-8.72987,-91.8398	0/0:17:17,0:17:599:0:0:0,-5.11751,-54.2381	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:52:52,0:52:1819:0:0:0,-15.6536,-163.988	0/1:73:35,38:35:1229:38:1360:-100.725,0,-88.9365	0/1:9:4,5:4:140:5:180:-13.8428,0,-10.2353	0/1:124:51,73:51:1811:73:2592:-196.196,0,-125.873	0/1:198:92,106:92:3224:106:3796:-282.233,0,-230.779	0/1:39:34,5:34:1177:5:180:-4.76612,0,-94.4921	0/0:62:62,0:62:2178:0:0:0,-18.6639,-196.286	0/1:182:86,96:86:3045:96:3448:-255.744,0,-219.493	0/0:90:90,0:90:3198:0:0:0,-27.0927,-288.044	0/0:26:26,0:26:899:0:0:0,-7.82678,-81.2204	0/0:29:29,0:29:1024:0:0:0,-8.72987,-92.4726	0/1:20:14,6:14:500:6:216:-13.7699,0,-39.3156	0/1:38:10,28:10:347:28:1000:-78.8762,0,-20.1245	0/1:97:47,50:47:1633:50:1776:-130.921,0,-118.056	0/1:52:20,30:20:699:30:1076:-81.7416,0,-47.8221	0/0:179:179,0:179:6320:0:0:0,-53.8844,-568.901	0/1:122:62,60:62:2183:60:2151:-157.129,0,-160.011	0/0:96:96,0:96:3374:0:0:0,-28.8989,-303.88	0/0:41:40,1:40:1412:1:36:0,-8.74395,-123.779	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:39:39,0:39:1388:0:0:0,-11.7402,-125.219	0/1:89:39,50:39:1396:50:1788:-134.411,0,-99.1474	0/1:117:52,65:52:1832:65:2315:-173.382,0,-129.94	0/1:41:24,17:24:851:17:603:-42.2573,0,-64.5672	0/1:47:17,30:17:604:30:1076:-83.0044,0,-40.5422	0/1:43:20,23:20:690:23:797:-59.1016,0,-49.475	0/1:104:55,49:55:1934:49:1734:-125.037,0,-143.026	0/1:17:9,8:9:320:8:279:-20.33,0,-24.0248	0/0:58:58,0:58:2039:0:0:0,-17.4597,-183.779	0/0:68:68,0:68:2369:0:0:0,-20.47,-213.466	0/0:24:24,0:24:849:0:0:0,-7.22472,-76.7278	0/1:87:43,44:43:1510:44:1565:-114.952,0,-110.002	0/1:57:19,38:19:680:38:1338:-103.529,0,-44.3705	0/0:73:73,0:73:2557:0:0:0,-21.9752,-230.379	0/0:84:84,0:84:2971:0:0:0,-25.2865,-267.625
chr01	1865286	.	TTG	TTT,CTT	170257	PASS	AB=0.496061,0.500739;ABP=3.55771,3.02954;AC=146,42;AF=0.776596,0.223404;AN=188;AO=6151,2046;CIGAR=2M1X,1X1M1X;DP=8218;DPB=8218;DPRA=0,1.29874;EPP=13316.3,4402.52;EPPR=0;GTI=2;LEN=1,3;MEANALT=1.7234,2.29787;MQM=47.4835,37.4609;MQMR=0;NS=94;NUMALT=2;ODDS=0.155467;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=220520,71807;QR=0;RO=0;RPL=0,0;RPP=13359.7,4445.84;RPPR=0;RPR=6151,2046;RUN=1,1;SAF=6146,2041;SAP=13316.3,4402.52;SAR=5,5;SRF=0;SRP=0;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:6:0,6,0:0:0:6,0:216,0:-19.6613,-1.80618,0,-19.6613,-1.80618,-19.6613	1/2:77:0,39,38:0:0:39,38:1395,1311:-207.909,-94.8366,-83.0964,-113.404,0,-101.965	1/1:126:0,124,1:0:0:124,1:4438,36:-395.42,-37.3277,0,-392.8,-34.6493,-392.499	1/1:194:0,188,6:0:0:188,6:6719,216:-598.66,-56.5936,0,-582.192,-39.7863,-580.385	1/1:14:0,14,0:0:0:14,0:504,0:-45.3991,-4.21442,0,-45.3991,-4.21442,-45.3991	1/1:59:0,59,0:0:0:59,0:2124,0:-190.421,-17.7608,0,-190.421,-17.7608,-190.421	1/1:142:0,142,0:0:0:142,0:5095,0:-454.536,-42.7463,0,-454.536,-42.7463,-454.536	1/1:170:0,170,0:0:0:170,0:6084,0:-542.584,-51.1751,0,-542.584,-51.1751,-542.584	1/1:120:0,120,0:0:0:120,0:4295,0:-384.4,-36.1236,0,-384.4,-36.1236,-384.4	1/1:114:0,114,0:0:0:114,0:4083,0:-363.792,-34.3174,0,-363.792,-34.3174,-363.792	1/1:47:0,47,0:0:0:47,0:1688,0:-150.91,-14.1484,0,-150.91,-14.1484,-150.91	1/2:77:0,34,43:0:0:34,43:1220,1495:-208.045,-109.412,-99.1773,-98.9709,0,-86.0266	1/2:105:0,54,51:0:0:54,51:1944,1792:-285.551,-128.476,-112.221,-157.409,0,-142.056	1/2:56:0,28,28:0:0:28,28:1008,988:-154.313,-72.6486,-64.2198,-82.0031,0,-73.5743	1/2:67:0,43,24:0:0:43,24:1539,852:-189.413,-65.3113,-52.367,-124.443,0,-117.218	1/1:62:0,61,1:0:0:61,1:2196,36:-195.962,-18.3628,0,-193.342,-15.4177,-193.041	1/1:49:0,48,0:0:0:48,0:1728,0:-154.119,-14.4494,0,-154.119,-14.4494,-154.119	1/2:74:0,35,39:0:0:35,39:1260,1375:-200.312,-98.1495,-87.6134,-102.499,0,-90.7588	1/1:49:0,49,0:0:0:49,0:1756,0:-157.168,-14.7505,0,-157.168,-14.7505,-157.168	1/1:103:0,103,0:0:0:103,0:3691,0:-328.982,-31.0061,0,-328.982,-31.0061,-328.982	1/2:203:0,129,73:0:0:129,73:4628,2495:-557.218,-182.984,-144.151,-374.297,0,-352.322	1/2:78:0,28,49:0:0:28,49:1004,1747:-217.284,-136.328,-127.9,-81.0619,0,-66.3114	1/1:67:0,67,0:0:0:67,0:2400,0:-214.476,-20.169,0,-214.476,-20.169,-214.476	1/2:21:0,7,14:0:0:7,14:252,494:-57.2993,-36.861,-34.7538,-20.7846,0,-16.5701	1/1:76:0,76,0:0:0:76,0:2720,0:-242.604,-22.8783,0,-242.604,-22.8783,-242.604	1/1:264:0,264,0:0:0:264,0:9447,0:-840.515,-79.4719,0,-840.515,-79.4719,-840.515	1/2:193:0,124,69:0:0:124,69:4460,2429:-542.85,-182.551,-145.223,-360.636,0,-339.865	1/1:37:0,35,0:0:0:35,0:1256,0:-111.793,-10.5361,0,-111.793,-10.5361,-111.793	1/1:201:0,201,0:0:0:201,0:7194,0:-640.123,-60.507,0,-640.123,-60.507,-640.123	1/1:108:0,107,0:0:0:107,0:3831,0:-340.198,-32.2102,0,-340.198,-32.2102,-340.198	1/2:115:0,74,40:0:0:74,40:2664,1385:-321.442,-106.808,-84.5317,-214.654,0,-202.613	1/1:15:0,15,0:0:0:15,0:540,0:-47.7073,-4.51545,0,-47.7073,-4.51545,-47.7073	1/1:52:0,52,0:0:0:52,0:1864,0:-166.334,-15.6536,0,-166.334,-15.6536,-166.334	1/2:14:0,10,4:0:0:10,4:360,125:-37.9528,-8.68957,-5.67927,-29.5565,0,-28.3524	1/2:14:0,8,6:0:0:8,6:273,216:-37.8926,-16.0477,-13.6395,-22.1747,0,-20.3686	1/1:11:0,11,0:0:0:11,0:396,0:-35.7768,-3.31133,0,-35.7768,-3.31133,-35.7768	1/2:183:0,92,91:0:0:92,91:3312,3221:-519.636,-252.274,-224.579,-267.711,0,-240.317	1/2:112:0,46,64:0:0:46,64:1652,2258:-301.695,-167.946,-154.099,-133.864,0,-114.598	1/1:72:0,72,0:0:0:72,0:2584,0:-230.668,-21.6742,0,-230.668,-21.6742,-230.668	1/2:5:0,2,3:0:0:2,3:72,108:-14.3053,-8.46612,-7.86406,-6.18746,0,-5.28437	1/2:134:0,69,65:0:0:69,65:2484,2261:-370.88,-169.923,-149.152,-201.296,0,-181.729	1/1:34:0,34,0:0:0:34,0:1224,0:-109.155,-10.235,0,-109.155,-10.235,-109.155	1/1:75:0,75,0:0:0:75,0:2689,0:-240.017,-22.5773,0,-240.017,-22.5773,-240.017	1/1:63:0,60,3:0:0:60,3:2147,98:-190.892,-18.0618,0,-183.707,-10.5747,-182.804	1/2:60:0,31,29:0:0:31,29:1116,1014:-166.5,-77.8013,-68.4694,-89.039,0,-80.3091	1/1:165:0,165,0:0:0:165,0:5923,0:-527.188,-49.67,0,-527.188,-49.67,-527.188	1/2:105:0,63,41:0:0:63,41:2263,1425:-285.502,-104.074,-85.1093,-181.554,0,-169.212	1/2:156:0,75,81:0:0:75,81:2673,2836:-430.386,-214.475,-191.898,-216.252,0,-191.869	1/1:164:0,164,0:0:0:164,0:5879,0:-523.993,-49.3689,0,-523.993,-49.3689,-523.993	1/2:146:0,79,67:0:0:79,67:2836,2333:-408.956,-180.079,-156.297,-229.22,0,-209.051	1/1:136:0,135,1:0:0:135,1:4831,34:-430.065,-40.6391,0,-427.577,-37.841,-427.276	1/1:8:0,8,0:0:0:8,0:284,0:-25.716,-2.40824,0,-25.716,-2.40824,-25.716	1/2:85:0,36,49:0:0:36,49:1296,1726:-228.813,-123.953,-113.116,-105.199,0,-90.4488	1/1:62:0,62,0:0:0:62,0:2202,0:-195.795,-18.6639,0,-195.795,-18.6639,-195.795	1/1:24:0,24,0:0:0:24,0:860,0:-77.3251,-7.22472,0,-77.3251,-7.22472,-77.3251	1/1:84:0,84,0:0:0:84,0:3020,0:-269.649,-25.2865,0,-269.649,-25.2865,-269.649	1/1:69:0,69,0:0:0:69,0:2484,0:-221.168,-20.7711,0,-221.168,-20.7711,-221.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chr01	1865294	.	A	G	30565.7	PASS	AB=0.494342;ABP=4.11597;AC=42;AF=0.223404;AN=188;AO=1977;CIGAR=1X;DP=8118;DPB=8118;DPRA=1.34883;EPP=3880.95;EPPR=12292.9;GTI=0;LEN=1;MEANALT=1.04167;MQM=37.5094;MQMR=47.4633;NS=94;NUMALT=1;ODDS=2.6943;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70587;QR=219985;RO=6138;RPL=1923;RPP=3839.78;RPPR=12251.2;RPR=54;RUN=1;SAF=1972;SAP=4252.69;SAR=5;SRF=6133;SRP=13288.1;SRR=5;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.3062	0/1:77:39,38:39:1404:38:1364:-86.3379,0,-102.761	0/0:127:126,1:126:4524:1:36:0,-34.9846,-398.646	0/0:191:186,5:186:6652:5:180:0,-41.7482,-576.815	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.6152	0/0:59:59,0:59:2116:0:0:0,-17.7608,-189.606	0/0:139:139,0:139:4973:0:0:0,-41.8432,-443.681	0/0:167:167,0:167:5954:0:0:0,-50.272,-530.914	0/0:116:116,0:116:4152:0:0:0,-34.9195,-371.589	0/0:112:112,0:112:4012:0:0:0,-33.7154,-357.538	0/0:47:47,0:47:1692:0:0:0,-14.1484,-151.257	0/1:74:35,39:35:1260:39:1384:-90.1227,0,-90.5004	0/1:105:55,50:55:1976:50:1784:-110.618,0,-144.928	0/1:53:27,26:27:972:26:932:-60.5817,0,-71.2613	0/1:67:43,24:43:1540:24:864:-53.3236,0,-117.341	0/0:62:62,0:62:2232:0:0:0,-18.6639,-199.208	0/0:50:50,0:50:1800:0:0:0,-15.0515,-160.509	0/1:72:34,38:34:1224:38:1360:-86.6481,0,-88.14	0/0:49:49,0:49:1752:0:0:0,-14.7505,-156.967	0/0:103:103,0:103:3696:0:0:0,-31.0061,-329.412	0/1:195:127,68:127:4545:68:2395:-137.018,0,-347.235	0/1:77:28,49:28:1000:49:1760:-129.727,0,-66.2109	0/0:66:66,0:66:2360:0:0:0,-19.868,-210.937	0/1:21:7,14:7:252:14:504:-35.3768,0,-16.5701	0/0:75:75,0:75:2684:0:0:0,-22.5772,-239.388	0/0:262:262,0:262:9412:0:0:0,-78.8699,-836.651	0/1:189:122,67:122:4369:67:2400:-143.501,0,-332.956	0/0:36:36,0:36:1288:0:0:0,-10.8371,-114.761	0/0:202:201,0:201:7181:0:0:0,-60.507,-639.223	0/0:107:107,0:107:3836:0:0:0,-32.2102,-341.229	0/1:113:74,39:74:2652:39:1396:-85.0187,0,-201.859	0/0:15:15,0:15:540:0:0:0,-4.51545,-47.7073	0/0:53:53,0:53:1900:0:0:0,-15.9546,-169.544	0/1:13:10,3:10:360:3:108:-4.27305,0,-28.6534	0/1:14:8,6:8:284:6:212:-13.4355,0,-20.6969	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.7768	0/1:180:93,87:93:3340:87:3106:-215.327,0,-243.745	0/1:111:47,64:47:1692:64:2287:-155.335,0,-116.919	0/0:72:70,2:70:2516:2:72:0,-15.5065,-219.015	0/1:5:2,3:2:72:3:108:-7.86406,0,-5.28437	0/1:130:68,62:68:2425:62:2207:-144.572,0,-177.686	0/0:34:33,1:33:1188:1:36:0,-6.98886,-102.988	0/0:76:76,0:76:2732:0:0:0,-22.8783,-243.299	0/0:64:64,0:64:2292:0:0:0,-19.2659,-203.113	0/1:58:32,26:32:1148:26:924:-61.3676,0,-83.4356	0/0:165:165,0:165:5924:0:0:0,-49.6699,-527.288	0/1:103:63,39:63:2260:39:1396:-81.7206,0,-169.204	0/1:151:77,74:77:2772:74:2656:-176.851,0,-201.858	0/0:163:163,0:163:5848:0:0:0,-49.0679,-521.089	0/1:141:78,63:78:2788:63:2257:-150.278,0,-206.318	0/0:137:137,0:137:4908:0:0:0,-41.2411,-436.883	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.0631	0/1:86:37,49:37:1317:49:1757:-115.067,0,-91.7329	0/0:62:62,0:62:2205:0:0:0,-18.6639,-195.903	0/0:23:23,0:23:820:0:0:0,-6.92369,-73.7539	0/0:85:85,0:85:3044:0:0:0,-25.5875,-271.824	0/0:69:69,0:69:2480:0:0:0,-20.7711,-220.849	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.8276	0/0:30:30,0:30:1080:0:0:0,-9.0309,-95.4476	0/0:38:38,0:38:1360:0:0:0,-11.4391,-119.595	0/1:94:35,59:35:1260:59:2099:-150.879,0,-83.4254	0/1:7:1,6:1:36:6:212:-16.2496,0,-1.4596	0/1:167:75,92:75:2696:92:3265:-232.653,0,-189.396	0/1:155:74,81:74:2660:81:2908:-199.979,0,-188.664	0/1:36:31,5:31:1104:5:165:-3.43704,0,-87.8969	0/0:47:47,0:47:1665:0:0:0,-14.1484,-148.633	0/1:124:54,70:54:1936:70:2508:-176.611,0,-134.063	0/0:62:62,0:62:2216:0:0:0,-18.6639,-198.03	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.0718	0/0:68:68,0:68:2436:0:0:0,-20.47,-216.799	0/1:80:37,43:37:1332:43:1536:-109.736,0,-94.4037	0/1:23:8,15:8:288:15:536:-37.7929,0,-19.114	0/1:140:63,77:63:2260:77:2748:-179.973,0,-159.195	0/1:110:63,47:63:2233:47:1692:-104.031,0,-166.177	0/0:245:243,1:243:8728:1:36:0,-70.5298,-774.08	0/1:156:60,96:60:2156:96:3432:-243.888,0,-145.419	0/0:50:50,0:50:1796:0:0:0,-15.0515,-159.57	0/0:68:68,0:68:2436:0:0:0,-20.47,-217.865	0/0:20:20,0:20:720:0:0:0,-6.0206,-64.7757	0/0:101:101,0:101:3601:0:0:0,-30.404,-321.495	0/1:62:20,42:20:720:42:1489:-101.906,0,-45.8108	0/1:200:107,93:107:3817:93:3339:-223.817,0,-277.726	0/1:101:51,50:51:1836:50:1772:-120.953,0,-133.361	0/1:67:39,28:39:1404:28:983:-63.2398,0,-105.389	0/1:71:28,43:28:999:43:1540:-108.8,0,-68.1611	0/1:137:76,61:76:2724:61:2184:-143.992,0,-201.38	0/1:48:17,31:17:612:31:1103:-72.9198,0,-40.3514	0/0:56:56,0:56:1997:0:0:0,-16.8577,-178.134	0/0:62:62,0:62:2228:0:0:0,-18.6639,-198.789	0/0:24:24,0:24:864:0:0:0,-7.22472,-77.5532	0/1:106:45,61:45:1612:61:2179:-149.603,0,-110.065	0/1:58:20,38:20:716:38:1344:-97.1709,0,-46.4122	0/0:118:118,0:118:4236:0:0:0,-35.5215,-376.981	0/0:100:99,1:99:3556:1:32:0,-27.1153,-313.837
chr01	1865299	.	AGCGA	AGCGG	125305	PASS	AB=0.491836;ABP=5.35046;AC=146;AF=0.776596;AN=188;AO=6047;CIGAR=4M1X;DP=8140;DPB=8139.6;DPRA=0;EPP=13125.2;EPPR=4380.74;GTI=1;LEN=1;MEANALT=1.59574;MQM=47.556;MQMR=37.6105;NS=94;NUMALT=1;ODDS=0.751161;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=215839;QR=69770;RO=2028;RPL=6041;RPP=13081.8;RPPR=4337.54;RPR=6;RUN=1;SAF=6042;SAP=13090.5;SAR=5;SRF=2023;SRP=4363.43;SRR=5;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:6:0,6:0:0:6:216:-19.6613,-1.80618,0	0/1:77:38,39:38:1321:39:1387:-101.272,0,-84.0822	1/1:125:1,122:1:35:122:4354:-385.296,-34.1491,0	1/1:189:5,184:5:168:184:6549:-568.386,-42.0032,0	1/1:15:0,15:0:0:15:540:-48.6152,-4.51545,0	1/1:59:0,59:0:0:59:2099:-188.123,-17.7608,0	1/1:138:0,138:0:0:138:4936:-440.405,-41.5421,0	1/1:170:0,168:0:0:168:6024:-537.438,-50.573,0	1/1:116:0,116:0:0:116:4129:-369.275,-34.9195,0	1/1:113:0,111:0:0:111:3971:-353.918,-33.4143,0	1/1:47:0,47:0:0:47:1671:-149.436,-14.1484,0	0/1:77:42,35:42:1441:35:1223:-86.3264,0,-95.8475	0/1:106:50,56:50:1740:56:1980:-145.026,0,-109.237	0/1:53:27,25:27:921:25:883:-63.415,0,-61.4625	0/1:67:24,42:24:819:42:1491:-113.238,0,-50.2071	1/1:61:0,61:0:0:61:2187:-195.201,-18.3628,0	1/1:49:0,49:0:0:49:1760:-156.949,-14.7505,0	0/1:74:38,35:38:1319:35:1233:-88.4772,0,-84.5714	1/1:48:0,47:0:0:47:1684:-150.721,-14.1484,0	1/1:99:0,99:0:0:99:3533:-314.916,-29.802,0	0/1:205:70,130:70:2340:130:4615:-352.161,0,-136.143	0/1:77:49,28:49:1698:28:1008:-66.7352,0,-124.741	1/1:67:0,67:0:0:67:2390:-213.607,-20.169,0	0/1:21:14,7:14:487:7:252:-16.5701,0,-34.2564	1/1:75:0,75:0:0:75:2676:-238.695,-22.5773,0	1/1:261:0,260:0:0:260:9309:-827.877,-78.2678,0	0/1:190:68,122:68:2348:122:4376:-333.293,0,-141.49	1/1:35:0,34:0:0:34:1203:-107.298,-10.235,0	1/1:198:0,197:0:0:197:7067:-628.975,-59.3029,0	1/1:105:0,104:0:0:104:3720:-330.821,-31.3071,0	0/1:112:39,72:39:1336:72:2580:-196.23,0,-81.7737	1/1:15:0,12:0:0:12:432:-38.6208,-3.61236,0	1/1:51:0,51:0:0:51:1819:-162.326,-15.3525,0	0/1:13:3,10:3:91:10:360:-28.6534,0,-4.00284	0/1:14:6,7:6:203:7:252:-18.7756,0,-13.0404	1/1:11:0,11:0:0:11:396:-35.7768,-3.31133,0	0/1:184:91,93:91:3147:93:3319:-240.728,0,-218.935	0/1:109:65,43:65:2206:43:1531:-103.799,0,-151.483	1/1:70:0,70:0:0:70:2512:-224.221,-21.0721,0	0/1:5:3,2:3:107:2:72:-5.28437,0,-7.80943	0/1:136:66,70:66:2212:70:2503:-182.856,0,-146.652	1/1:34:0,33:0:0:33:1176:-104.865,-9.93399,0	1/1:78:0,78:0:0:78:2800:-249.385,-23.4803,0	1/1:59:0,58:0:0:58:2033:-180.369,-17.4597,0	0/1:60:28,32:28:947:32:1148:-82.8335,0,-63.3886	1/1:163:0,162:0:0:162:5775:-514.445,-48.7669,0	0/1:104:41,60:41:1392:60:2156:-161.084,0,-83.8423	0/1:158:79,77:79:2711:77:2756:-197.911,0,-183.254	1/1:163:0,162:0:0:162:5798:-516.134,-48.7669,0	0/1:142:67,74:67:2298:74:2630:-192.219,0,-155.293	1/1:137:0,137:0:0:137:4860:-432.718,-41.2411,0	1/1:6:0,6:0:0:6:216:-19.6429,-1.80618,0	0/1:87:49,37:49:1718:37:1324:-92.165,0,-113.711	1/1:61:0,61:0:0:61:2160:-192.273,-18.3628,0	1/1:24:0,24:0:0:24:855:-76.8643,-7.22472,0	1/1:83:0,82:0:0:82:2932:-261.796,-24.6845,0	1/1:70:0,68:0:0:68:2420:-215.667,-20.47,0	1/1:7:0,7:0:0:7:248:-22.4799,-2.10721,0	1/1:28:0,28:0:0:28:1004:-89.9336,-8.42884,0	1/1:36:0,35:0:0:35:1256:-111.231,-10.5361,0	0/1:99:63,35:63:2173:35:1243:-80.7877,0,-156.023	0/1:7:6,1:6:194:1:36:-1.4596,0,-15.0654	0/1:166:93,73:93:3198:73:2608:-182.064,0,-228.881	0/1:156:81,71:81:2787:71:2536:-180.231,0,-193.504	0/1:39:5,33:5:171:33:1176:-92.2329,0,-3.09953	1/1:47:0,47:0:0:47:1684:-150.304,-14.1484,0	0/1:126:74,50:74:2545:50:1796:-120.893,0,-181.588	1/1:64:0,64:0:0:64:2296:-205.163,-19.2659,0	1/1:18:0,18:0:0:18:644:-57.94,-5.41854,0	1/1:65:0,62:0:0:62:2209:-197.113,-18.6639,0	0/1:82:45,36:45:1562:36:1281:-89.59,0,-111.889	0/1:24:16,8:16:535:8:288:-18.813,0,-38.4124	0/1:144:80,63:80:2725:63:2233:-156.177,0,-180.561	0/1:118:53,65:53:1841:65:2312:-170.806,0,-115.332	1/1:241:0,237:0:0:237:8452:-753.279,-71.3441,0	0/1:155:97,58:97:3410:58:2065:-137.77,0,-243.334	1/1:50:0,49:0:0:49:1751:-156.496,-14.7505,0	1/1:69:0,69:0:0:69:2471:-220.841,-20.7711,0	1/1:20:0,20:0:0:20:712:-64.0746,-6.0206,0	1/1:98:0,97:0:0:97:3459:-308.882,-29.1999,0	0/1:62:42,20:42:1433:20:720:-45.8108,0,-99.0495	0/1:202:92,109:92:3216:109:3911:-285.175,0,-215.382	0/1:101:50,51:50:1755:51:1802:-130.418,0,-119.982	0/1:65:28,37:28:979:37:1319:-98.4349,0,-63.6391	0/1:71:43,28:43:1473:28:1004:-68.6046,0,-104.714	0/1:137:65,72:65:2236:72:2572:-188.189,0,-149.82	0/1:49:30,18:30:1047:18:627:-41.2132,0,-68.6407	1/1:54:0,54:0:0:54:1931:-172.531,-16.2556,0	1/1:63:0,62:0:0:62:2220:-197.914,-18.6639,0	1/1:23:0,23:0:0:23:809:-72.6563,-6.92369,0	0/1:108:63,43:63:2155:43:1519:-102.094,0,-149.646	0/1:60:39,21:39:1330:21:756:-49.0215,0,-96.3309	1/1:117:0,116:0:0:116:4153:-369.619,-34.9195,0	1/1:97:0,97:0:0:97:3455:-307.744,-29.1999,0
chr01	2037293	.	C	A	126147	PASS	AB=0.487327;ABP=7.85358;AC=148;AF=0.787234;AN=188;AO=5875;CIGAR=1X;DP=7659;DPB=7659;DPRA=0;EPP=12656.4;EPPR=3796.97;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.7935;MQMR=59.8026;NS=94;NUMALT=1;ODDS=3.3794;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=210519;QR=63800;RO=1783;RPL=12;RPP=12656.4;RPPR=3796.97;RPR=5863;RUN=1;SAF=5875;SAP=12760.4;SAR=0;SRF=1783;SRP=3874.75;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:77:0,77:0:0:77:2761:-248.729,-23.1793,0	0/1:62:32,30:32:1135:30:1076:-78.4847,0,-83.7942	1/1:135:0,135:0:0:135:4832:-435.021,-40.6391,0	1/1:185:0,185:0:0:185:6631:-596.713,-55.6906,0	1/1:75:0,75:0:0:75:2700:-243.234,-22.5773,0	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	1/1:83:0,83:0:0:83:2988:-269.146,-24.9855,0	1/1:127:0,127:0:0:127:4534:-408.225,-38.2308,0	1/1:131:0,131:0:0:131:4698:-422.96,-39.4349,0	1/1:43:0,43:0:0:43:1544:-139.244,-12.9443,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:81:41,40:41:1476:40:1439:-105.424,0,-108.752	0/1:58:27,31:27:953:31:1116:-83.2838,0,-68.6156	0/1:55:26,29:26:924:29:1044:-77.7135,0,-66.9204	0/1:41:14,27:14:495:27:972:-75.4529,0,-32.5408	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:11:0,11:0:0:11:388:-35.2558,-3.31133,0	0/1:23:13,10:13:468:10:360:-25.8144,0,-35.535	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	1/1:192:1,191:1:36:191:6818:-610.085,-54.1995,0	0/1:174:79,95:79:2828:95:3414:-255.038,0,-202.378	0/1:159:114,45:114:4076:45:1608:-97.1371,0,-319.148	1/1:104:0,104:0:0:104:3740:-336.772,-31.3071,0	0/1:64:21,43:21:756:43:1536:-119.261,0,-49.0982	1/1:152:0,152:0:0:152:5432:-488.953,-45.7566,0	1/1:220:0,220:0:0:220:7916:-712.443,-66.2266,0	0/1:248:126,122:126:4517:122:4368:-318.593,0,-332.036	1/1:14:0,14:0:0:14:504:-45.6919,-4.21442,0	1/1:183:0,183:0:0:183:6577:-592.003,-55.0885,0	1/1:101:0,101:0:0:101:3613:-325.37,-30.404,0	0/1:124:73,51:73:2612:51:1818:-126.564,0,-197.442	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/1:25:12,13:12:428:13:468:-34.9339,0,-31.3331	1/1:21:0,21:0:0:21:756:-68.3663,-6.32163,0	0/1:126:50,76:50:1792:76:2721:-207.179,0,-123.63	0/1:144:68,76:68:2424:76:2721:-201.765,0,-175.065	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/1:102:56,46:56:2016:46:1652:-118.219,0,-151.006	1/1:18:0,18:0:0:18:648:-58.6457,-5.41854,0	1/1:174:0,174:0:0:174:6220:-559.868,-52.3792,0	1/1:26:0,26:0:0:26:928:-83.808,-7.82678,0	0/1:29:13,16:13:464:16:572:-42.4533,0,-33.3672	1/1:143:0,143:0:0:143:5095:-458.353,-43.0473,0	0/1:116:55,61:55:1972:61:2166:-160.196,0,-141.598	0/1:149:74,75:74:2660:75:2696:-198.028,0,-194.783	1/1:82:0,82:0:0:82:2933:-264.198,-24.6845,0	0/1:49:26,23:26:936:23:828:-60.0936,0,-69.789	1/1:141:0,141:0:0:141:5061:-455.584,-42.4452,0	1/1:14:0,14:0:0:14:491:-44.5207,-4.21442,0	0/1:174:85,89:85:3060:89:3200:-235.836,0,-223.139	1/1:54:0,54:0:0:54:1925:-173.516,-16.2556,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:134:0,134:0:0:134:4764:-428.697,-40.338,0	1/1:48:0,48:0:0:48:1694:-152.742,-14.4494,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:74:0,74:0:0:74:2664:-239.997,-22.2762,0	0/1:94:46,47:46:1648:47:1688:-123.846,0,-120.197	0/1:4:2,2:2:68:2:72:-5.6326,0,-5.25359	1/1:118:0,118:0:0:118:4233:-381.136,-35.5215,0	0/1:162:79,83:79:2832:83:2973:-219.027,0,-206.35	1/1:49:3,46:3:104:46:1641:-138.256,-5.04766,0	1/1:58:0,58:0:0:58:2082:-187.649,-17.4597,0	0/1:122:50,72:50:1769:72:2580:-195.724,0,-122.766	1/1:153:0,153:0:0:153:5488:-494.03,-46.0576,0	1/1:14:0,14:0:0:14:500:-45.1065,-4.21442,0	1/1:78:0,78:0:0:78:2808:-252.955,-23.4803,0	0/1:33:18,15:18:648:15:540:-38.9998,0,-48.717	0/1:21:17,4:17:612:4:144:-6.99158,0,-49.0918	0/1:219:115,104:115:4101:104:3717:-268.805,0,-303.289	0/1:52:25,27:25:891:27:968:-71.7719,0,-64.8543	1/1:186:0,186:0:0:186:6668:-600.047,-55.9916,0	0/1:112:56,56:56:2012:56:2016:-147.995,0,-147.637	1/1:125:0,125:0:0:125:4480:-403.289,-37.6288,0	1/1:54:0,54:0:0:54:1940:-174.876,-16.2556,0	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	1/1:119:0,119:0:0:119:4276:-385.006,-35.8226,0	0/1:87:48,39:48:1724:39:1394:-99.5674,0,-129.242	0/1:202:99,103:99:3531:103:3692:-271.674,0,-257.174	0/1:56:32,24:32:1152:24:864:-61.2233,0,-87.1317	0/1:54:29,25:29:1044:25:895:-64.613,0,-78.0164	0/1:26:17,9:17:604:9:324:-21.6791,0,-46.8638	0/1:81:53,28:53:1881:28:1004:-66.2897,0,-145.18	0/1:17:10,7:10:360:7:252:-17.9114,0,-27.6259	1/1:42:0,42:0:0:42:1512:-136.354,-12.6433,0	1/1:44:0,44:0:0:44:1576:-142.125,-13.2453,0	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:75:43,32:43:1544:32:1133:-79.6871,0,-116.672	0/1:37:25,12:25:887:12:428:-27.7207,0,-69.01	1/1:82:0,82:0:0:82:2945:-265.268,-24.6845,0	1/1:58:0,58:0:0:58:2084:-187.825,-17.4597,0
chr01	2037302	.	A	G	29666.3	PASS	AB=0.510116;ABP=6.08551;AC=40;AF=0.212766;AN=188;AO=1769;CIGAR=1X;DP=7640;DPB=7640;DPRA=1.16085;EPP=3844.34;EPPR=12734.4;GTI=0;LEN=1;MEANALT=1.09524;MQM=59.7739;MQMR=59.7963;NS=94;NUMALT=1;ODDS=3.67085;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63010;QR=210651;RO=5867;RPL=1769;RPP=3844.34;RPPR=12734.4;RPR=0;RUN=1;SAF=1769;SAP=3844.34;SAR=0;SRF=5867;SRP=12743;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:78:78,0:78:2808:0:0:0,-23.4803,-252.954	0/1:62:31,31:31:1116:31:1112:-81.7275,0,-82.0836	0/0:135:135,0:135:4840:0:0:0,-40.639,-435.739	0/0:185:185,0:185:6652:0:0:0,-55.6905,-598.598	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.113	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.708	0/0:127:127,0:127:4568:0:0:0,-38.2308,-411.283	0/0:128:128,0:128:4604:0:0:0,-38.5318,-414.5	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.365	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/1:83:40,43:40:1440:43:1529:-112.915,0,-104.911	0/1:57:31,26:31:1108:26:917:-65.6796,0,-82.8641	0/1:55:29,26:29:1040:26:919:-66.4689,0,-77.3531	0/1:41:27,14:27:972:14:504:-33.3559,0,-75.4529	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9765	0/1:23:11,12:11:396:12:432:-32.2966,0,-29.0528	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:189:188,1:188:6752:1:36:0,-53.2964,-604.146	0/1:174:95,78:95:3420:78:2788:-198.721,0,-255.468	0/1:158:47,111:47:1692:111:3984:-311.18,0,-104.992	0/0:103:103,0:103:3704:0:0:0,-31.0061,-333.533	0/1:64:43,21:43:1548:21:746:-48.1962,0,-120.334	0/0:153:153,0:153:5480:0:0:0,-46.0576,-493.191	0/0:221:221,0:221:7932:0:0:0,-66.5276,-713.885	0/1:245:117,128:117:4212:128:4572:-337.89,0,-305.4	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.33	0/0:182:182,0:182:6529:0:0:0,-54.7875,-587.684	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.243	0/1:127:51,76:51:1836:76:2696:-204.425,0,-127.276	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/1:11:2,9:2:72:9:320:-25.831,0,-3.52539	0/1:26:13,13:13:468:13:464:-34.2707,0,-34.6329	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7674	0/1:125:75,48:75:2696:48:1716:-117.336,0,-205.475	0/1:146:77,69:77:2772:69:2431:-175.09,0,-205.752	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:103:47,56:47:1684:56:2004:-149.625,0,-120.796	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2844	0/0:175:175,0:175:6280:0:0:0,-52.6802,-565.265	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1281	0/1:29:16,13:16:576:13:459:-32.9138,0,-42.8148	0/0:144:144,0:144:5161:0:0:0,-43.3483,-464.291	0/1:113:59,54:59:2108:54:1909:-137.49,0,-155.879	0/1:151:76,75:76:2736:75:2654:-193.64,0,-201.024	0/0:83:83,0:83:2988:0:0:0,-24.9855,-269.144	0/1:49:23,26:23:828:26:936:-69.789,0,-60.0936	0/0:140:140,0:140:4997:0:0:0,-42.1442,-449.847	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6977	0/1:170:88,82:88:3164:82:2929:-212.497,0,-233.803	0/0:54:54,0:54:1921:0:0:0,-16.2556,-173.156	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:132:132,0:132:4735:0:0:0,-39.736,-426.05	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.637	0/1:93:47,46:47:1688:46:1612:-117.357,0,-124.206	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:120:120,0:120:4308:0:0:0,-36.1236,-387.884	0/1:162:83,79:83:2988:79:2790:-202.57,0,-220.377	0/0:48:45,3:45:1608:3:108:0,-4.37427,-134.917	0/0:58:58,0:58:2088:0:0:0,-17.4597,-188.187	0/1:123:73,50:73:2620:50:1787:-124.085,0,-199.021	0/0:153:153,0:153:5500:0:0:0,-46.0576,-495.109	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.1071	0/0:79:79,0:79:2816:0:0:0,-23.7814,-253.674	0/1:33:15,17:15:536:17:612:-45.5612,0,-38.7199	0/1:21:4,17:4:144:17:612:-49.0918,0,-6.99158	0/1:217:103,114:103:3700:114:4074:-301.185,0,-267.877	0/1:51:26,25:26:936:25:878:-63.9824,0,-69.2012	0/0:185:185,0:185:6633:0:0:0,-55.6905,-596.763	0/1:114:58,56:58:2088:56:2006:-146.495,0,-153.87	0/0:127:127,0:127:4556:0:0:0,-38.2308,-410.119	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.236	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:118:118,0:118:4240:0:0:0,-35.5215,-381.767	0/1:86:39,47:39:1400:47:1681:-125.676,0,-100.407	0/1:199:103,96:103:3699:96:3433:-249.245,0,-273.205	0/1:55:24,31:24:864:31:1079:-80.8575,0,-61.5244	0/1:53:25,28:25:900:28:999:-74.2676,0,-65.3618	0/1:26:9,17:9:324:17:608:-47.2252,0,-21.6791	0/1:78:28,50:28:1008:50:1785:-137.448,0,-67.5533	0/1:17:7,10:7:252:10:360:-27.6259,0,-17.9114	0/0:42:42,0:42:1500:0:0:0,-12.6433,-135.274	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.606	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:74:32,42:32:1140:42:1504:-113.372,0,-80.6216	0/1:38:12,26:12:428:26:917:-71.4055,0,-27.4197	0/0:82:82,0:82:2948:0:0:0,-24.6845,-265.538	0/0:56:56,0:56:2016:0:0:0,-16.8577,-181.708
chr01	2199852	.	ACATT	ACATC,GCATC	406961	PASS	AB=0.531637,0.464961;ABP=66.9002,81.3786;AC=147,41;AF=0.781915,0.218085;AN=188;AO=12977,3450;CIGAR=4M1X,1X3M1X;DP=16502;DPB=16502.6;DPRA=0,1.46832;EPP=28182.2,7494.59;EPPR=20.3821;GTI=1;LEN=1,5;MEANALT=2.23404,2.70909;MQM=55.3764,54.5003;MQMR=55.875;NS=94;NUMALT=2;ODDS=4.07921;PAIRED=0,0;PAIREDR=0;PAO=1,1;PQA=34,34;PQR=0;PRO=1;QA=461287,119743;QR=273;RO=8;RPL=2741,150;RPP=9402.91,6248.35;RPPR=4.09604;RPR=10236,3300;RUN=1,1;SAF=2741,150;SAP=9402.91,6248.35;SAR=10236,3300;SRF=3;SRP=4.09604;SRR=5;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:97:0,97,0:0:0:97,0:3453,0:-310.974,-29.1999,0,-310.974,-29.1999,-310.974	1/2:228:0,119,109:0:0:119,109:4253,3790:-654.939,-308.167,-272.344,-347.124,0,-314.312	1/1:289:0,284,0:0:0:284,0:10114,0:-909.798,-85.4925,0,-909.798,-85.4925,-909.798	1/1:477:0,474,0:0:0:474,0:16786,0:-1484.85,-142.688,0,-1484.85,-142.688,-1484.85	1/1:161:0,160,1:0:0:160,1:5700,36:-512.759,-48.1648,0,-509.823,-44.8693,-509.522	1/1:57:0,56,0:0:0:56,0:1990,0:-179.092,-16.8577,0,-179.092,-16.8577,-179.092	1/1:301:0,299,1:0:0:299,1:10658,36:-937.939,-90.008,0,-935.001,-87.0706,-934.7	1/1:287:0,284,2:0:0:284,2:10123,72:-910.647,-85.4925,0,-904.912,-79.7619,-904.31	1/2:179:0,86,93:0:0:86,93:3056,3216:-510.529,-261.499,-235.611,-249.381,0,-221.385	1/1:174:0,173,0:0:0:173,0:6181,0:-544.708,-52.0782,0,-544.708,-52.0782,-544.708	1/1:141:1,140,0:1:36:140,0:4998,0:-427.25,-38.8587,0,-427.551,-42.1442,-430.477	1/2:76:0,39,37:0:0:39,37:1375,1285:-216.422,-104.464,-92.7234,-112.308,0,-101.17	1/2:73:0,37,35:0:0:37,35:1320,1235:-207.69,-100.079,-88.9413,-107.625,0,-97.0886	1/2:42:0,22,20:0:0:22,20:771,667:-116.417,-53.6689,-47.0463,-63.0876,0,-57.067	1/2:107:0,69,38:0:0:69,38:2432,1338:-301.588,-109.049,-88.2776,-192.888,0,-181.448	1/1:62:0,61,0:0:0:61,0:2138,0:-192.394,-18.3628,0,-192.394,-18.3628,-192.394	1/1:98:0,98,0:0:0:98,0:3478,0:-313.233,-29.5009,0,-313.233,-29.5009,-313.233	1/2:69:0,39,30:0:0:39,30:1369,1053:-197.374,-85.958,-74.2178,-111.766,0,-102.735	1/1:45:0,44,0:0:0:44,0:1533,0:-137.899,-13.2453,0,-137.899,-13.2453,-137.899	1/1:470:2,461,2:2:72:461,2:16337,71:-1431.6,-132.89,0,-1427.27,-133.85,-1432.55	1/2:279:0,137,142:0:0:137,142:4890,4900:-796.195,-397.534,-356.293,-399.011,0,-356.265	1/2:254:0,74,180:0:0:74,180:2639,6242:-658.779,-446.112,-423.836,-213.007,0,-158.821	1/1:214:0,209,3:0:0:209,3:7461,108:-650.099,-62.9153,0,-643.158,-56.0158,-642.255	1/2:110:0,66,44:0:0:66,44:2338,1549:-316.787,-126.33,-106.462,-190.81,0,-177.565	1/1:118:0,118,0:0:0:118,0:4204,0:-378.543,-35.5215,0,-378.543,-35.5215,-378.543	1/1:626:0,623,1:0:0:623,1:22148,36:-1968.92,-187.542,0,-1967.43,-186.104,-1967.13	1/2:515:0,238,276:0:0:238,276:8496,9567:-1469.49,-776.872,-705.227,-692.752,0,-609.668	1/1:39:0,39,0:0:0:39,0:1374,0:-123.174,-11.7402,0,-123.174,-11.7402,-123.174	1/1:548:0,546,1:0:0:546,1:19393,29:-1723.04,-164.362,0,-1720.73,-162.046,-1720.43	1/1:194:0,190,1:0:0:190,1:6787,36:-610.571,-57.1957,0,-607.635,-54.2507,-607.334	1/2:237:0,157,79:0:0:157,79:5535,2753:-664.947,-222.937,-175.675,-441.997,0,-418.216	1/1:7:0,7,0:0:0:7,0:248,0:-22.6642,-2.10721,0,-22.6642,-2.10721,-22.6642	1/1:25:0,25,0:0:0:25,0:881,0:-79.6012,-7.52575,0,-79.6012,-7.52575,-79.6012	1/2:9:0,3,6:0:0:3,6:108,204:-25.04,-16.217,-15.3139,-9.17208,0,-7.3659	1/2:15:0,3,11:0:0:3,11:108,383:-39.94,-31.1256,-30.2225,-8.81233,0,-5.501	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:367:0,197,165:0:0:197,165:6958,5746:-915.729,-362.532,-303.229,-553.22,0,-503.551	1/2:223:0,119,104:0:0:119,104:4226,3533:-630.184,-285.835,-250.012,-344.632,0,-313.325	1/1:47:1,46,0:1:25:46,0:1641,0:-145.478,-11.6485,0,-145.779,-13.8474,-147.725	1/2:6:0,5,1:0:0:5,1:176,36:-17.617,-3.29553,-1.79038,-14.6799,0,-14.3788	1/2:248:0,99,148:0:0:99,148:3526,5083:-698.789,-411.393,-381.591,-287.386,0,-242.834	1/1:33:0,33,0:0:0:33,0:1176,0:-105.656,-9.93399,0,-105.656,-9.93399,-105.656	1/1:346:0,344,0:0:0:344,0:12259,0:-1102.84,-103.554,0,-1102.84,-103.554,-1102.84	1/1:160:0,159,0:0:0:159,0:5597,0:-492.072,-47.8638,0,-492.072,-47.8638,-492.072	1/2:117:0,74,43:0:0:74,43:2631,1443:-325.258,-117.05,-94.7733,-208.547,0,-195.603	1/1:312:0,312,0:0:0:312,0:11087,0:-984.275,-93.9214,0,-984.275,-93.9214,-984.275	1/2:234:0,123,109:0:0:123,109:4364,3772:-661.817,-306.329,-269.302,-355.567,0,-322.755	1/2:356:0,212,140:0:0:212,140:7578,4824:-996.498,-390.94,-327.122,-605.617,0,-563.473	1/1:197:0,196,0:0:0:196,0:6991,0:-615.355,-59.0019,0,-615.355,-59.0019,-615.355	1/2:245:0,136,109:0:0:136,109:4850,3843:-700.351,-312.29,-271.35,-388.413,0,-355.6	1/1:390:0,387,0:0:0:387,0:13821,0:-1226.61,-116.499,0,-1226.61,-116.499,-1226.61	1/1:28:0,28,0:0:0:28,0:1000,0:-88.8714,-8.42884,0,-88.8714,-8.42884,-88.8714	1/2:158:0,73,85:0:0:73,85:2569,2965:-450.25,-241.118,-219.143,-209.482,0,-183.895	1/1:94:0,94,0:0:0:94,0:3336,0:-293.13,-28.2968,0,-293.13,-28.2968,-293.13	1/1:32:0,32,0:0:0:32,0:1140,0:-102.909,-9.63296,0,-102.909,-9.63296,-102.909	1/1:207:1,205,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chr01	2199888	.	TCT	TTT	57233.9	PASS	AB=0.512481;ABP=11.7912;AC=41;AF=0.218085;AN=188;AO=3341;CIGAR=1M1X1M;DP=14013;DPB=14010;DPRA=1.28709;EPP=7188.58;EPPR=22869.3;GTI=1;LEN=1;MEANALT=1.31915;MQM=56.1078;MQMR=59.9558;NS=94;NUMALT=1;ODDS=0.0100336;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119592;QR=377283;RO=10646;RPL=3333;RPP=7188.58;RPPR=22869.3;RPR=8;RUN=1;SAF=0;SAP=7257.9;SAR=3341;SRF=0;SRP=23120.5;SRR=10646;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:100:99,0:99:3510:0:0:0,-29.802,-315.753	0/1:235:122,113:122:4332:113:4048:-293.132,0,-319.314	0/0:298:298,0:298:10546:0:0:0,-89.7069,-949.057	0/0:358:358,0:358:12624:0:0:0,-107.769,-1136	0/0:169:167,1:167:5931:1:36:0,-47.3362,-530.305	0/0:58:58,0:58:2055:0:0:0,-17.4597,-185.22	0/0:208:207,0:207:7358:0:0:0,-62.3132,-661.953	0/0:302:299,2:299:10605:2:72:0,-84.2774,-947.626	0/1:184:88,96:88:3117:96:3448:-254.849,0,-225.368	0/0:118:118,0:118:4163:0:0:0,-35.5215,-374.855	0/0:43:43,0:43:1541:0:0:0,-12.9443,-138.98	0/1:78:39,38:39:1378:38:1368:-99.5015,0,-100.779	0/1:76:38,37:38:1365:37:1327:-96.0685,0,-100.214	0/1:42:22,20:22:772:20:695:-49.8594,0,-57.1571	0/1:77:37,39:37:1322:39:1404:-103.16,0,-96.0435	0/0:67:67,0:67:2385:0:0:0,-20.169,-214.902	0/0:100:100,0:100:3572:0:0:0,-30.103,-321.688	0/1:69:39,30:39:1383:30:1080:-76.6465,0,-103.997	0/0:45:45,0:45:1573:0:0:0,-13.5463,-141.858	0/0:301:301,0:301:10664:0:0:0,-90.61,-959.578	0/1:287:140,147:140:4963:147:5269:-386.902,0,-360.428	0/1:192:56,135:56:1994:135:4827:-376.257,0,-121.879	0/0:123:123,0:123:4382:0:0:0,-37.0267,-394.552	0/1:113:67,46:67:2386:46:1633:-113.108,0,-180.981	0/0:121:120,0:120:4223:0:0:0,-36.1236,-379.893	0/0:505:505,0:505:17895:0:0:0,-152.02,-1610.17	0/1:525:241,280:241:8564:280:10006:-742.284,0,-613.477	0/0:38:38,0:38:1331:0:0:0,-11.4391,-120.084	0/0:394:393,1:393:13965:1:36:0,-115.009,-1253.03	0/0:199:198,1:198:7023:1:36:0,-56.3084,-628.539	0/1:191:113,78:113:3991:78:2779:-192.172,0,-301.887	0/0:7:7,0:7:250:0:0:0,-2.10721,-22.8467	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1945	0/1:9:3,3:3:108:3:108:-7.91855,0,-7.92131	0/1:17:4,13:4:144:13:468:-37.3312,0,-8.19611	0/0:9:9,0:9:322:0:0:0,-2.70927,-29.3242	0/1:196:106,89:106:3779:89:3194:-228.335,0,-281.249	0/1:237:128,109:128:4519:109:3875:-276.612,0,-335.502	0/0:50:50,0:50:1785:0:0:0,-15.0515,-160.932	0/1:6:5,1:5:168:1:36:-1.79038,0,-13.6444	0/1:258:106,152:106:3757:152:5467:-412.633,0,-260.665	0/0:33:32,0:32:1146:0:0:0,-9.63296,-103.09	0/0:354:354,0:354:12576:0:0:0,-106.565,-1131.67	0/0:107:107,0:107:3809:0:0:0,-32.2102,-343.008	0/1:88:46,42:46:1640:42:1497:-108.002,0,-121.398	0/0:230:230,0:230:8083:0:0:0,-69.2369,-727.499	0/1:240:128,111:128:4533:111:3953:-283.282,0,-335.824	0/1:305:156,149:156:5551:149:5352:-388.713,0,-407.897	0/0:135:135,0:135:4783:0:0:0,-40.639,-430.627	0/1:219:106,113:106:3757:113:4023:-295.305,0,-272.408	0/0:286:286,0:286:10144:0:0:0,-86.0946,-912.896	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/1:163:76,87:76:2717:87:3124:-231.919,0,-195.706	0/0:36:36,0:36:1260:0:0:0,-10.8371,-113.701	0/0:32:31,0:31:1110:0:0:0,-9.33193,-99.8517	0/0:221:221,0:221:7753:0:0:0,-66.5276,-697.819	0/0:79:79,0:79:2804:0:0:0,-23.7814,-252.6	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:28:28,0:28:983:0:0:0,-8.42884,-88.7824	0/0:65:65,0:65:2290:0:0:0,-19.5669,-206.362	0/1:119:57,62:57:2042:62:2224:-164.197,0,-148.229	0/1:11:7,4:7:244:4:144:-9.99269,0,-18.9875	0/0:336:336,0:336:11914:0:0:0,-101.146,-1072.12	0/1:337:163,173:163:5764:173:6192:-455.271,0,-417.413	0/0:126:117,9:117:4171:9:324:0,-8.43795,-346.081	0/0:191:191,0:191:6726:0:0:0,-57.4967,-605.418	0/1:360:148,211:148:5238:211:7580:-572.686,0,-363.213	0/0:146:146,0:146:5175:0:0:0,-43.9504,-465.882	0/0:22:22,0:22:782:0:0:0,-6.62266,-70.703	0/0:132:132,0:132:4675:0:0:0,-39.736,-420.913	0/1:109:55,54:55:1944:54:1944:-142.315,0,-142.421	0/1:25:11,14:11:385:14:504:-38.1394,0,-27.4589	0/1:141:83,58:83:2922:58:2084:-145.264,0,-220.769	0/1:82:36,46:36:1281:46:1656:-124.604,0,-90.9083	0/0:203:203,0:203:7204:0:0:0,-61.1091,-648.419	0/1:291:143,147:143:5092:147:5239:-382.95,0,-370.874	0/0:151:151,0:151:5345:0:0:0,-45.4555,-481.164	0/0:196:195,0:195:6860:0:0:0,-58.7008,-617.111	0/0:51:51,0:51:1817:0:0:0,-15.3525,-163.775	0/0:206:205,1:205:7235:1:36:0,-58.4156,-647.527	0/1:276:131,145:131:4625:145:5196:-384.136,0,-333.331	0/1:313:166,147:166:5849:147:5236:-375.908,0,-432.303	0/1:107:46,61:46:1639:61:2188:-164.231,0,-115.588	0/1:60:27,33:27:968:33:1184:-88.6376,0,-69.3758	0/1:104:51,52:51:1802:52:1860:-135.722,0,-131.094	0/1:170:80,90:80:2814:90:3221:-238.395,0,-202.323	0/1:36:24,12:24:849:12:432:-28.3732,0,-65.8907	0/0:82:82,0:82:2931:0:0:0,-24.6845,-264.025	0/0:73:73,0:73:2589:0:0:0,-21.9752,-233.257	0/0:52:51,0:51:1817:0:0:0,-15.3525,-163.45	0/1:60:29,31:29:1044:31:1112:-82.2854,0,-76.2048	0/1:82:24,58:24:841:58:2075:-161.884,0,-51.3229	0/0:145:145,0:145:5159:0:0:0,-43.6493,-464.45	0/0:132:132,0:132:4700:0:0:0,-39.736,-423.161
chr01	2428720	.	T	C	106336	PASS	AB=0.38326;ABP=271.718;AC=152;AF=0.808511;AN=188;AO=4932;CIGAR=1X;DP=6344;DPB=6344;DPRA=0;EPP=10712.7;EPPR=3062.61;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9907;MQMR=59.9957;NS=94;NUMALT=1;ODDS=3.64611;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=175992;QR=50486;RO=1409;RPL=4932;RPP=10712.7;RPPR=3062.61;RPR=0;RUN=1;SAF=0;SAP=10712.7;SAR=4932;SRF=0;SRP=3062.61;SRR=1409;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	0/1:36:25,11:25:900:11:396:-25.1457,0,-70.4839	1/1:33:0,33:0:0:33:1176:-106.148,-9.93399,0	1/1:86:0,86:0:0:86:3062:-275.806,-25.8886,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:32:0,32:0:0:32:1144:-103.27,-9.63296,0	1/1:44:0,44:0:0:44:1553:-140.06,-13.2453,0	0/1:50:27,23:27:968:23:828:-59.7926,0,-72.3859	1/1:46:0,46:0:0:46:1641:-147.977,-13.8474,0	1/1:73:0,73:0:0:73:2624:-236.407,-21.9752,0	0/1:76:45,31:45:1612:31:1095:-75.9808,0,-122.492	0/1:68:38,30:38:1364:30:1076:-76.6828,0,-102.591	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	0/1:68:45,23:45:1608:23:824:-54.0133,0,-124.54	1/1:50:0,50:0:0:50:1784:-160.843,-15.0515,0	1/1:24:0,24:0:0:24:852:-77.0004,-7.22472,0	0/1:38:16,22:16:576:22:784:-59.4448,0,-40.7358	1/1:47:0,47:0:0:47:1684:-151.847,-14.1484,0	1/1:27:0,27:0:0:27:953:-86.0833,-8.12781,0	0/1:38:23,15:23:824:15:540:-37.4974,0,-63.0442	0/1:36:28,8:28:996:8:288:-15.4303,0,-79.1178	1/1:33:2,31:2:72:31:1116:-93.915,-3.09727,0	0/1:37:32,5:32:1148:5:176:-5.04691,0,-92.4917	1/1:28:0,27:0:0:27:964:-86.7171,-8.12781,0	1/1:84:0,84:0:0:84:2978:-268.251,-25.2865,0	0/1:175:112,63:112:4012:63:2211:-146.57,0,-308.587	1/1:34:0,34:0:0:34:1224:-110.467,-10.235,0	1/1:84:0,84:0:0:84:2993:-269.601,-25.2865,0	1/1:45:1,44:1:36:44:1576:-138.533,-9.94808,0	0/1:49:33,16:33:1188:16:572:-37.063,0,-92.4781	1/1:216:0,216:0:0:216:7665:-689.881,-65.0225,0	1/1:33:0,33:0:0:33:1180:-106.508,-9.93399,0	1/1:101:0,101:0:0:101:3583:-321.898,-30.404,0	1/1:112:3,109:3:108:109:3920:-342.916,-23.6402,0	1/1:278:0,278:0:0:278:9918:-892.562,-83.6863,0	0/1:159:94,65:94:3376:65:2304:-159.755,0,-256.191	0/1:50:31,19:31:1093:19:684:-46.8388,0,-83.6262	1/1:82:0,82:0:0:82:2944:-265.193,-24.6845,0	1/1:99:1,98:1:36:98:3512:-312.692,-26.2037,0	0/1:72:60,12:60:2111:12:432:-17.547,0,-168.58	1/1:47:0,47:0:0:47:1688:-152.207,-14.1484,0	1/1:57:0,57:0:0:57:2033:-183.24,-17.1587,0	1/1:47:0,47:0:0:47:1676:-151.127,-14.1484,0	0/1:57:32,24:32:1152:24:848:-59.5663,0,-86.9179	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	0/1:37:14,23:14:485:23:813:-62.351,0,-32.8389	0/1:111:71,40:71:2548:40:1399:-92.7876,0,-196.156	1/1:18:0,18:0:0:18:629:-56.9338,-5.41854,0	0/1:61:42,19:42:1508:19:680:-43.1663,0,-117.652	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	1/1:206:0,206:0:0:206:7347:-661.277,-62.0122,0	0/1:36:21,15:21:756:15:540:-38.0995,0,-57.5301	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:128:0,128:0:0:128:4577:-412.095,-38.5318,0	1/1:50:0,50:0:0:50:1796:-161.922,-15.0515,0	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	1/1:261:0,261:0:0:261:9307:-837.596,-78.5688,0	1/1:93:0,93:0:0:93:3291:-296.407,-27.9958,0	1/1:29:0,29:0:0:29:1025:-92.5607,-8.72987,0	0/1:70:46,24:46:1648:24:860:-56.6497,0,-127.536	1/1:291:2,289:2:72:289:10335:-923.232,-80.763,0	1/1:146:0,146:0:0:146:5199:-468.049,-43.9504,0	0/1:75:67,8:67:2412:8:288:-3.69016,0,-194.759	0/1:19:2,17:2:72:17:589:-47.6137,0,-1.11715	1/1:79:0,79:0:0:79:2825:-254.487,-23.7814,0	1/1:43:1,42:1:36:42:1500:-131.696,-9.34602,0	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	1/1:82:0,82:0:0:82:2928:-263.755,-24.6845,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	0/1:26:14,12:14:504:12:428:-31.032,0,-37.8713	0/1:45:9,36:9:320:36:1296:-103.398,0,-15.596	0/1:36:31,5:31:1116:5:180:-5.71499,0,-89.9146	0/1:61:43,18:43:1544:18:648:-40.2891,0,-120.89	1/1:43:0,43:0:0:43:1536:-138.533,-12.9443,0	0/1:70:40,30:40:1440:30:1080:-76.4412,0,-108.826	1/1:72:0,72:0:0:72:2576:-232.09,-21.6742,0	1/1:32:1,31:1:36:31:1112:-96.7931,-6.03469,0	1/1:65:0,65:0:0:65:2332:-210.14,-19.567,0	1/1:27:0,27:0:0:27:938:-84.7293,-8.12781,0	0/1:41:31,10:31:1116:10:345:-19.0386,0,-88.4095	0/1:93:60,33:60:2152:33:1184:-78.8725,0,-165.951	0/1:52:30,22:30:1080:22:788:-55.5887,0,-81.8597	0/1:68:45,23:45:1616:23:819:-53.5615,0,-125.26	0/1:45:25,20:25:892:20:716:-51.2214,0,-67.0533	0/1:103:63,39:63:2268:39:1396:-94.8743,0,-173.317	0/1:19:11,8:11:392:8:284:-20.1838,0,-29.9005	1/1:50:0,50:0:0:50:1796:-161.922,-15.0515,0	1/1:37:0,37:0:0:37:1320:-119.102,-11.1381,0	1/1:76:0,76:0:0:76:2728:-245.763,-22.8783,0	0/1:127:40,87:40:1421:87:3084:-239.56,0,-89.9546	0/1:66:52,14:52:1872:14:504:-25.8301,0,-148.891	1/1:65:0,65:0:0:65:2324:-209.42,-19.567,0	1/1:95:0,95:0:0:95:3385:-304.866,-28.5979,0
chr01	2429823	.	G	A	394278	PASS	AB=0.516834;ABP=24.8695;AC=149;AF=0.792553;AN=188;AO=18257;CIGAR=1X;DP=22586;DPB=22586;DPRA=0;EPP=39638.9;EPPR=9377.26;GTI=0;LEN=1;MEANALT=1.11702;MQM=59.9841;MQMR=59.9942;NS=94;NUMALT=1;ODDS=28.3259;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=652536;QR=153383;RO=4317;RPL=18256;RPP=39638.9;RPPR=9377.26;RPR=1;RUN=1;SAF=18257;SAP=39647.6;SAR=0;SRF=4317;SRP=9377.26;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:31:0,31:0:0:31:1108:-100.031,-9.33193,0	0/1:207:103,104:103:3643:104:3728:-273.407,0,-265.762	1/1:170:0,170:0:0:170:6053:-544.873,-51.1751,0	1/1:286:0,286:0:0:286:10235:-921.076,-86.0946,0	1/1:101:0,101:0:0:101:3620:-326.005,-30.404,0	1/1:77:0,77:0:0:77:2764:-249.001,-23.1793,0	1/1:205:0,205:0:0:205:7306:-657.59,-61.7112,0	1/1:125:0,125:0:0:125:4483:-403.638,-37.6288,0	0/1:81:22,59:22:784:59:2124:-167.045,0,-46.5005	1/1:75:0,75:0:0:75:2690:-242.344,-22.5773,0	1/1:262:0,262:0:0:262:9386:-844.701,-78.8699,0	0/1:68:36,32:36:1266:32:1144:-82.7995,0,-93.7711	0/1:68:25,43:25:884:43:1536:-118.063,0,-59.4083	1/1:48:0,48:0:0:48:1707:-153.915,-14.4494,0	0/1:74:34,40:34:1198:40:1432:-106.901,0,-85.8478	1/1:60:0,60:0:0:60:2130:-191.967,-18.0618,0	1/1:61:0,61:0:0:61:2152:-193.945,-18.3628,0	0/1:67:27,40:27:955:40:1432:-109.009,0,-66.0958	1/1:222:0,221:0:0:221:7889:-709.589,-66.5276,0	1/1:260:0,259:0:0:259:9249:-832.02,-77.9668,0	0/1:143:61,82:61:2176:82:2935:-221.336,0,-153.059	0/1:184:118,66:118:4137:66:2364:-157.629,0,-317.125	1/1:89:0,89:0:0:89:3188:-287.144,-26.7917,0	0/1:110:48,62:48:1712:62:2219:-166.86,0,-121.252	1/1:74:0,74:0:0:74:2664:-240.005,-22.2762,0	1/1:306:1,305:1:36:305:10924:-978.829,-88.5169,0	0/1:213:110,103:110:3932:103:3680:-267.282,0,-289.954	1/1:24:1,23:1:32:23:815:-70.4715,-4.02541,0	1/1:440:0,439:0:0:439:15723:-1414.4,-132.152,0	1/1:118:1,117:1:36:117:4188:-373.503,-31.9233,0	0/1:171:74,97:74:2624:97:3453:-259.014,0,-184.93	1/1:910:2,908:2:72:908:32391:-2907.23,-267.101,0	1/1:625:5,620:5:180:620:22192:-1980.13,-171.592,0	0/1:737:317,420:317:11266:420:14994:-1127.22,0,-791.963	0/1:1169:547,621:547:19483:621:22135:-1639.76,0,-1401.21	1/1:1038:3,1035:3:108:1035:37000:-3318.73,-302.394,0	0/1:180:72,107:72:2531:107:3818:-289.612,0,-173.836	0/1:202:101,100:101:3623:100:3560:-259.742,0,-265.407	1/1:395:0,394:0:0:394:14011:-1260.56,-118.606,0	0/1:472:222,250:222:7896:250:8912:-659.977,0,-568.584	0/1:128:60,68:60:2148:68:2424:-179.883,0,-155.056	1/1:237:1,236:1:36:236:8403:-752.678,-67.7458,0	1/1:177:0,175:0:0:175:6276:-564.573,-52.6803,0	1/1:52:0,52:0:0:52:1863:-167.949,-15.6536,0	0/1:65:31,34:31:1112:34:1203:-89.0071,0,-80.8244	1/1:85:1,84:1:36:84:3009:-267.441,-21.9893,0	0/1:123:59,64:59:2105:64:2292:-169.515,0,-152.691	0/1:652:321,331:321:11420:331:11839:-869.099,0,-831.409	1/1:112:2,110:2:72:110:3914:-345.616,-26.8786,0	0/1:206:113,93:113:4030:93:3324:-237.366,0,-300.876	1/1:153:0,153:0:0:153:5470:-492.427,-46.0576,0	1/1:963:1,962:1:21:962:34458:-3098.02,-287.792,0	0/1:217:116,101:116:4140:101:3628:-261.401,0,-307.459	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	1/1:1130:1,1129:1:36:1129:40337:-3625.21,-336.566,0	1/1:183:1,182:1:36:182:6517:-583.014,-51.4902,0	1/1:79:0,79:0:0:79:2822:-254.218,-23.7814,0	1/1:877:0,877:0:0:877:31352:-2820.66,-264.003,0	1/1:547:0,547:0:0:547:19595:-1763.05,-164.663,0	1/1:110:0,110:0:0:110:3917:-352.72,-33.1133,0	0/1:77:37,40:37:1300:40:1417:-104.647,0,-94.1219	0/1:675:331,344:331:11762:344:12306:-904.183,0,-855.255	1/1:77:0,77:0:0:77:2748:-247.563,-23.1793,0	0/1:307:156,151:156:5559:151:5399:-393.625,0,-408.02	1/1:68:3,65:3:108:65:2336:-200.424,-10.3949,0	1/1:140:0,140:0:0:140:5007:-450.776,-42.1442,0	1/1:188:1,187:1:36:187:6679:-597.588,-52.9954,0	1/1:129:4,125:4:144:125:4481:-390.144,-25.5193,0	1/1:168:0,168:0:0:168:5994:-539.567,-50.573,0	1/1:77:0,77:0:0:77:2760:-248.642,-23.1793,0	0/1:74:35,39:35:1234:39:1404:-104.383,0,-89.0864	0/1:446:195,251:195:6949:251:8946:-670.861,0,-491.218	0/1:66:31,35:31:1108:35:1256:-93.4773,0,-80.163	0/1:34:18,16:18:644:16:576:-41.94,0,-48.0556	1/1:175:0,175:0:0:175:6265:-563.942,-52.6803,0	0/1:282:142,138:142:5067:138:4951:-361.089,0,-371.499	1/1:164:0,164:0:0:164:5866:-528.05,-49.3689,0	1/1:154:1,153:1:36:153:5488:-490.446,-42.7603,0	1/1:813:1,812:1:36:812:28990:-2604.64,-241.139,0	1/1:192:1,191:1:36:191:6846:-612.61,-54.1995,0	0/1:137:76,61:76:2720:61:2173:-154.594,0,-203.802	0/1:232:126,106:126:4483:106:3803:-272.627,0,-333.803	0/1:84:46,38:46:1622:38:1364:-97.7742,0,-120.981	0/1:57:34,23:34:1203:23:828:-57.6854,0,-91.4163	0/1:68:39,29:39:1379:29:1044:-73.8048,0,-103.938	0/1:133:61,72:61:2172:72:2572:-191.693,0,-155.71	0/1:56:33,22:33:1163:22:775:-53.241,0,-88.1471	1/1:73:0,73:0:0:73:2592:-233.528,-21.9752,0	1/1:80:0,80:0:0:80:2853:-257.007,-24.0824,0	1/1:321:1,320:1:36:320:11451:-1026.87,-93.0324,0	0/1:546:263,283:263:9247:283:10096:-744.213,0,-667.853	0/1:70:45,25:45:1573:25:887:-59.076,0,-120.784	1/1:64:0,64:0:0:64:2300:-207.261,-19.2659,0	1/1:80:0,80:0:0:80:2846:-256.378,-24.0824,0
chr01	2533607	.	C	A	561343	PASS	AB=0.491705;ABP=9.99897;AC=148;AF=0.787234;AN=188;AO=20542;CIGAR=1X;DP=26522;DPB=26522;DPRA=0;EPP=44548.6;EPPR=12945;GTI=0;LEN=1;MEANALT=1.08511;MQM=59.7327;MQMR=59.9464;NS=94;NUMALT=1;ODDS=0.071104;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=733282;QR=212168;RO=5972;RPL=10254;RPP=3.1325;RPPR=167.21;RPR=10288;RUN=1;SAF=10247;SAP=3.25385;SAR=10295;SRF=2647;SRP=170.155;SRR=3325;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:158:1,157:1:36:157:5632:-503.322,-43.9645,0	0/1:466:240,226:240:8576:226:8103:-588.866,0,-631.549	1/1:354:1,353:1:36:353:12605:-1130.46,-102.966,0	1/1:1064:1,1063:1:36:1063:37844:-3400.87,-316.698,0	1/1:145:0,145:0:0:145:5159:-464.31,-43.6494,0	1/1:166:0,166:0:0:166:5929:-533.68,-49.971,0	1/1:381:2,379:2:72:379:13536:-1211.1,-107.856,0	1/1:489:1,488:1:36:488:17408:-1562.6,-143.605,0	0/1:259:126,133:126:4476:133:4772:-351.66,0,-324.613	1/1:321:0,321:0:0:321:11417:-1027.27,-96.6306,0	1/1:120:0,119:0:0:119:4260:-383.227,-35.8226,0	0/1:206:92,114:92:3239:114:4072:-304.533,0,-229.671	0/1:168:83,84:83:2955:84:3016:-221.035,0,-215.182	1/1:178:0,178:0:0:178:6392:-575.349,-53.5833,0	0/1:221:111,110:111:3972:110:3956:-289.69,0,-291.143	1/1:158:1,157:1:36:157:5570:-497.813,-43.9645,0	1/1:164:0,164:0:0:164:5870:-528.373,-49.3689,0	0/1:196:94,102:94:3346:102:3656:-270.232,0,-242.355	1/1:100:0,100:0:0:100:3596:-323.825,-30.103,0	1/1:582:0,582:0:0:582:20769:-1868.18,-175.199,0	0/1:462:250,211:250:8781:211:7519:-537.46,0,-650.129	0/1:191:129,62:129:4593:62:2232:-143.152,0,-356.039	1/1:241:0,241:0:0:241:8603:-774.21,-72.5482,0	0/1:281:105,176:105:3746:176:6320:-484.257,0,-252.748	1/1:202:0,202:0:0:202:7239:-651.534,-60.8081,0	1/1:949:0,949:0:0:949:33834:-3043.89,-285.677,0	0/1:755:382,372:382:13568:372:13265:-966.16,0,-992.795	1/1:109:1,107:1:36:107:3818:-340.218,-29.2728,0	1/1:935:2,933:2:72:933:33272:-2985.45,-274.626,0	1/1:287:1,286:1:36:286:10222:-916.131,-82.7973,0	0/1:408:191,217:191:6824:217:7767:-575.948,0,-491.407	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	1/1:24:0,24:0:0:24:856:-77.3519,-7.22472,0	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	1/1:28:0,28:0:0:28:998:-90.1237,-8.42884,0	0/1:548:266,282:266:9500:282:10069:-740.504,0,-689.995	0/1:489:279,210:279:9856:210:7523:-529.893,0,-739.787	0/1:161:82,79:82:2940:79:2828:-206.274,0,-216.368	0/1:14:9,5:9:324:5:171:-11.511,0,-25.2914	0/1:415:189,226:189:6739:226:8084:-602.635,0,-481.66	1/1:93:0,93:0:0:93:3337:-300.513,-27.9958,0	1/1:396:1,395:1:36:395:14106:-1265.59,-115.61,0	1/1:196:1,195:1:36:195:6996:-626.089,-55.4036,0	0/1:154:77,77:77:2756:77:2760:-201.162,0,-201.921	1/1:338:0,338:0:0:338:12047:-1083.08,-101.748,0	0/1:301:156,145:156:5535:145:5211:-378.485,0,-407.668	0/1:563:272,291:272:9651:291:10374:-764.015,0,-698.828	1/1:280:0,280:0:0:280:9969:-897.1,-84.2884,0	0/1:428:248,180:248:8782:180:6438:-450.651,0,-661.131	1/1:400:0,400:0:0:400:14311:-1287.66,-120.412,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:375:185,190:185:6605:190:6820:-500.971,0,-481.642	1/1:128:0,128:0:0:128:4538:-408.553,-38.5318,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:386:4,382:4:144:382:13578:-1208.39,-102.884,0	1/1:145:0,145:0:0:145:5173:-465.657,-43.6494,0	1/1:10:0,10:0:0:10:360:-32.7434,-3.0103,0	1/1:44:0,44:0:0:44:1584:-142.787,-13.2453,0	1/1:142:0,141:0:0:141:5011:-450.768,-42.4452,0	0/1:239:112,127:112:3999:127:4540:-336.775,0,-288.154	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:509:0,508:0:0:508:18101:-1628.21,-152.923,0	0/1:523:246,277:246:8760:277:9897:-733.2,0,-630.95	1/1:167:1,166:1:36:166:5884:-526.012,-46.6737,0	1/1:491:1,490:1:36:490:17425:-1564.18,-144.207,0	1/1:505:4,501:4:140:501:17839:-1591.26,-139.076,0	1/1:343:1,342:1:36:342:12162:-1090.79,-99.655,0	1/1:70:0,70:0:0:70:2504:-225.609,-21.0721,0	1/1:220:0,220:0:0:220:7856:-707.036,-66.2266,0	0/1:219:110,109:110:3933:109:3898:-285.071,0,-288.235	0/1:46:29,17:29:1027:17:612:-41.5661,0,-78.8902	0/1:214:118,96:118:4137:96:3423:-243.844,0,-308.095	0/1:218:98,120:98:3438:120:4287:-320.262,0,-244.008	1/1:569:0,569:0:0:569:20286:-1825.04,-171.286,0	0/1:535:283,252:283:10058:252:9000:-648.879,0,-743.332	1/1:301:4,297:4:136:297:10631:-943.535,-78.0345,0	1/1:301:2,299:2:72:299:10630:-949.763,-83.7733,0	1/1:7:0,7:0:0:7:252:-22.998,-2.10721,0	1/1:365:1,364:1:36:364:13008:-1166.81,-106.278,0	0/1:390:176,213:176:6278:213:7572:-564.059,0,-447.801	0/1:717:378,339:378:13408:339:12108:-873.694,0,-990.677	0/1:226:114,112:114:4029:112:4007:-292.774,0,-294.765	0/1:185:98,87:98:3468:87:3120:-225.305,0,-256.64	0/1:228:125,103:125:4456:103:3656:-260.602,0,-332.575	0/1:357:179,178:179:6322:178:6348:-463.932,0,-461.606	0/1:130:65,65:65:2302:65:2332:-170.911,0,-168.307	1/1:210:0,210:0:0:210:7500:-674.995,-63.2163,0	1/1:184:0,184:0:0:184:6566:-590.799,-55.3895,0	1/1:112:0,112:0:0:112:4012:-361.246,-33.7154,0	0/1:197:98,99:98:3493:99:3555:-260.843,0,-255.277	0/1:188:136,52:136:4832:52:1868:-111.803,0,-378.44	1/1:388:0,388:0:0:388:13840:-1245.19,-116.8,0	1/1:331:1,330:1:36:330:11832:-1060.99,-96.0427,0
chr01	2607882	.	CGACT	TGACT,TGACC	343638	PASS	AB=0.526291,0.467256;ABP=28.1296,41.9743;AC=151,37;AF=0.803191,0.196809;AN=188;AO=11620,1998;CIGAR=1X4M,1X3M1X;DP=13699;DPB=13701.4;DPRA=0,0.905069;EPP=13644.8,2848.23;EPPR=10.7656;GTI=2;LEN=1,5;MEANALT=2.29787,2.79245;MQM=59.9962,59.992;MQMR=60;NS=94;NUMALT=2;ODDS=4.88935;PAIRED=0,0;PAIREDR=0;PAO=6,6;PQA=211.5,211.5;PQR=0;PRO=0;QA=415921,69205;QR=240;RO=7;RPL=10083,1808;RPP=13651.2,2848.23;RPPR=10.7656;RPR=1537,190;RUN=1,1;SAF=11619,1998;SAP=25226.8,4341.61;SAR=1,0;SRF=7;SRP=18.2106;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:25:0,25,0:0:0:25,0:900,0:-81.321,-7.52575,0,-81.321,-7.52575,-81.321	1/2:135:0,78,55:0:0:78,55:2804,1894:-382.669,-153.899,-130.419,-228.837,0,-212.28	1/1:100:0,99,1:0:0:99,1:3536,36:-318.087,-29.802,0,-315.15,-26.5047,-314.849	1/1:201:0,199,2:0:0:199,2:7094,62:-638.209,-59.905,0,-633.233,-54.6185,-632.631	1/1:113:0,113,0:0:0:113,0:4036,0:-363.369,-34.0164,0,-363.369,-34.0164,-363.369	1/1:63:0,62,1:0:0:62,1:2220,36:-199.705,-18.6639,0,-196.767,-15.3666,-196.466	1/1:126:1,125,0:1:31:125,0:4473,0:-399.638,-34.8303,0,-399.939,-37.6288,-402.428	1/1:136:0,136,0:0:0:136,0:4867,0:-438.183,-40.9401,0,-438.183,-40.9401,-438.183	1/2:73:0,36,35:0:0:36,35:1292,1196:-202.548,-97.1495,-86.3124,-105.491,0,-94.9549	1/1:103:0,103,0:0:0:103,0:3692,0:-332.482,-31.0061,0,-332.482,-31.0061,-332.482	1/1:121:0,118,0:0:0:118,0:4213,0:-379.074,-35.5215,0,-379.074,-35.5215,-379.074	1/2:80:0,39,39:0:0:39,39:1387,1364:-224.066,-111.029,-99.2889,-113.1,0,-101.359	1/2:64:0,33,31:0:0:33,31:1169,1093:-184.576,-89.3483,-79.4143,-95.5813,0,-86.2494	1/1:75:0,74,0:0:0:74,0:2639,0:-237.397,-22.2762,0,-237.397,-22.2762,-237.397	1/2:53:0,24,28:0:0:24,28:851,971:-148.246,-78.9124,-71.6877,-69.3251,0,-60.8963	1/1:56:0,56,0:0:0:56,0:1997,0:-180.002,-16.8577,0,-180.002,-16.8577,-180.002	1/1:54:0,54,0:0:0:54,0:1921,0:-173.165,-16.2556,0,-173.165,-16.2556,-173.165	1/2:52:0,28,24:0:0:28,24:995,833:-149.145,-68.0605,-59.6317,-81.4352,0,-74.2105	1/1:166:0,166,0:0:0:166,0:5947,0:-535.336,-49.971,0,-535.336,-49.971,-535.336	1/1:190:0,189,0:0:0:189,0:6759,0:-608.143,-56.8947,0,-608.143,-56.8947,-608.143	1/2:125:0,60,64:0:0:60,64:2148,2155:-349.805,-174.627,-156.565,-175.2,0,-155.934	1/2:130:0,54,76:0:0:54,76:1940,2642:-373.357,-215.091,-198.836,-158.561,0,-135.683	1/1:99:0,97,2:0:0:97,2:3476,72:-312.661,-29.1999,0,-306.787,-22.9953,-306.185	1/2:58:0,27,29:0:0:27,29:945,997:-157.817,-80.9316,-72.8038,-76.856,0,-68.1261	1/1:70:0,70,0:0:0:70,0:2484,0:-223.812,-21.0721,0,-223.812,-21.0721,-223.812	1/1:293:0,289,1:0:0:289,1:10360,34:-932.005,-86.9977,0,-929.247,-84.2305,-928.946	1/2:205:0,112,92:0:0:112,92:3997,3203:-586.329,-260.477,-226.762,-325.873,0,-298.179	1/1:20:0,20,0:0:0:20,0:720,0:-65.1288,-6.0206,0,-65.1288,-6.0206,-65.1288	1/1:264:0,261,0:0:0:261,0:9364,0:-842.46,-78.5688,0,-842.46,-78.5688,-842.46	1/1:172:0,172,0:0:0:172,0:6161,0:-554.586,-51.7772,0,-554.586,-51.7772,-554.586	1/2:102:0,43,59:0:0:43,59:1548,2047:-293.056,-166.741,-153.797,-126.669,0,-108.908	1/1:142:0,141,0:0:0:141,0:5052,0:-454.515,-42.4452,0,-454.515,-42.4452,-454.515	1/1:332:0,329,2:0:0:329,2:11776,67:-1059.34,-99.0389,0,-1053.91,-93.6697,-1053.31	1/1:252:0,240,10:0:0:240,10:8592,343:-772.93,-72.2472,0,-745.083,-44.4136,-742.073	1/2:159:0,139,19:0:0:139,19:5004,657:-461.766,-53.4497,-11.6065,-408.38,0,-402.661	1/1:813:0,810,0:0:0:810,0:29010,0:-2609.73,-243.834,0,-2609.73,-243.834,-2609.73	1/2:182:0,88,93:0:0:88,93:3160,3281:-524.934,-267.157,-240.666,-257.774,0,-229.778	1/2:239:0,122,114:0:0:122,114:4372,3962:-678.698,-322.123,-285.397,-356.587,0,-322.27	1/2:157:0,114,42:0:0:114,42:4069,1434:-448.162,-116.427,-82.1101,-331.798,0,-319.155	1/1:176:0,171,2:0:0:171,2:6140,72:-552.409,-51.4761,0,-546.534,-45.552,-545.932	1/2:125:0,57,67:0:0:57,67:2033,2290:-351.564,-185.832,-168.673,-165.722,0,-145.553	1/1:94:0,93,0:0:0:93,0:3336,0:-300.097,-27.9958,0,-300.097,-27.9958,-300.097	1/1:69:0,68,1:0:0:68,1:2444,36:-219.855,-20.47,0,-216.917,-17.1728,-216.616	1/1:49:0,49,0:0:0:49,0:1751,0:-157.873,-14.7505,0,-157.873,-14.7505,-157.873	1/1:55:0,55,0:0:0:55,0:1972,0:-177.755,-16.5567,0,-177.755,-16.5567,-177.755	1/1:144:0,143,0:0:0:143,0:5066,0:-455.784,-43.0473,0,-455.784,-43.0473,-455.784	1/2:95:0,47,48:0:0:47,48:1692,1640:-271.503,-133.435,-119.287,-138.418,0,-123.969	1/2:222:0,111,110:0:0:111,110:3984,3789:-632.879,-307.895,-274.481,-325.124,0,-292.01	1/1:109:0,107,0:0:0:107,0:3836,0:-345.223,-32.2102,0,-345.223,-32.2102,-345.223	1/2:118:0,57,60:0:0:57,60:2052,2110:-339.244,-171.807,-154.648,-167.492,0,-149.43	1/1:60:0,60,0:0:0:60,0:2152,0:-193.947,-18.0618,0,-193.947,-18.0618,-193.947	1/1:475:0,475,0:0:0:475,0:17032,0:-1532.24,-142.989,0,-1532.24,-142.989,-1532.24	1/2:153:0,74,78:0:0:74,78:2656,2717:-437.644,-220.987,-198.711,-216.699,0,-193.219	1/1:50:0,50,0:0:0:50,0:1792,0:-161.562,-15.0515,0,-161.562,-15.0515,-161.562	1/1:757:1,750,0:1:35:750,0:26849,0:-2412.14,-222.923,0,-2412.44,-225.773,-2415.29	1/1:148:0,148,0:0:0:148,0:53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chr01	2722879	.	G	A	70604.3	PASS	AB=0.486556;ABP=13.4032;AC=40;AF=0.212766;AN=188;AO=3245;CIGAR=1X;DP=15043;DPB=15043;DPRA=1.26147;EPP=7014.74;EPPR=25587.3;GTI=1;LEN=1;MEANALT=1.07692;MQM=59.7002;MQMR=59.9636;NS=94;NUMALT=1;ODDS=1.54253;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=112737;QR=413909;RO=11790;RPL=1589;RPP=6.01423;RPPR=392.386;RPR=1656;RUN=1;SAF=1587;SAP=6.38361;SAR=1658;SRF=6620;SRP=390.247;SRR=5170;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:62:62,0:62:2155:0:0:0,-18.6639,-194.215	0/1:154:81,73:81:2869:73:2584:-186.44,0,-212.087	0/0:211:211,0:211:7440:0:0:0,-63.5173,-669.647	0/0:352:352,0:352:12400:0:0:0,-105.963,-1115.83	0/0:17:17,0:17:603:0:0:0,-5.11751,-54.5995	0/0:47:47,0:47:1675:0:0:0,-14.1484,-151.036	0/0:222:222,0:222:7831:0:0:0,-66.8287,-704.727	0/0:203:203,0:203:7167:0:0:0,-61.1091,-645.024	0/1:206:103,103:103:3542:103:3617:-263.71,0,-256.977	0/0:185:185,0:185:6519:0:0:0,-55.6905,-586.793	0/0:161:161,0:161:5572:0:0:0,-48.4658,-501.614	0/1:258:146,112:146:5044:112:3859:-269.569,0,-376.405	0/1:197:112,85:112:3874:85:2829:-195.521,0,-289.556	0/0:182:182,0:182:6316:0:0:0,-54.7875,-568.51	0/1:177:102,75:102:3588:75:2592:-180.242,0,-269.835	0/0:162:162,0:162:5667:0:0:0,-48.7669,-510.16	0/0:114:114,0:114:4031:0:0:0,-34.3174,-362.98	0/1:101:49,52:49:1713:52:1815:-133.199,0,-124.046	0/0:110:110,0:110:3849:0:0:0,-33.1133,-346.607	0/0:210:210,0:210:7460:0:0:0,-63.2163,-671.447	0/1:274:143,130:143:4992:130:4590:-329.653,0,-366.891	0/1:95:32,63:32:1122:63:2185:-168.314,0,-72.6885	0/0:213:211,2:211:7456:2:72:0,-57.2827,-664.253	0/1:137:68,69:68:2400:69:2432:-177.893,0,-175.015	0/0:109:109,0:109:3816:0:0:0,-32.8123,-343.638	0/0:344:342,2:342:12001:2:72:0,-96.7176,-1073.12	0/1:306:162,144:162:5634:144:5011:-359.019,0,-414.939	0/0:80:80,0:80:2837:0:0:0,-24.0824,-255.568	0/0:409:407,0:407:14462:0:0:0,-122.519,-1300.98	0/0:209:208,1:208:7253:1:36:0,-59.317,-649.236	0/1:208:100,108:100:3492:108:3812:-280.647,0,-251.877	0/1:21:19,2:19:680:2:68:-0.136079,0,-55.2075	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/1:7:2,5:2:72:5:167:-13.2429,0,-4.72951	0/1:12:10,2:10:348:2:72:-3.22436,0,-28.0428	0/0:35:35,0:35:1235:0:0:0,-10.536,-111.453	0/1:346:175,171:175:6084:171:5876:-424.798,0,-443.516	0/1:135:69,65:69:2380:65:2273:-164.088,0,-173.756	0/1:141:72,69:72:2490:69:2410:-174.701,0,-181.908	0/1:8:5,3:5:176:3:93:-6.26849,0,-13.7768	0/1:259:149,110:149:5250:110:3827:-266.529,0,-394.543	0/0:97:97,0:97:3374:0:0:0,-29.1999,-303.877	0/0:181:180,1:180:6325:1:36:0,-50.8882,-565.755	0/0:170:170,0:170:5927:0:0:0,-51.1751,-533.548	0/0:139:139,0:139:4848:0:0:0,-41.8432,-436.48	0/0:179:178,1:178:6243:1:36:0,-50.2861,-558.371	0/1:133:66,67:66:2347:67:2311:-168.198,0,-171.452	0/1:297:178,119:178:6292:119:4076:-277.613,0,-476.97	0/0:155:155,0:155:5442:0:0:0,-46.6596,-489.913	0/1:186:95,91:95:3355:91:3211:-233.215,0,-246.176	0/0:138:138,0:138:4891:0:0:0,-41.5421,-440.34	0/0:11:11,0:11:366:0:0:0,-3.31133,-33.2585	0/1:176:82,94:82:2845:94:3280:-242.392,0,-203.301	0/0:126:126,0:126:4410:0:0:0,-37.9298,-397.076	0/0:32:32,0:32:1129:0:0:0,-9.63296,-101.916	0/0:201:201,0:201:7006:0:0:0,-60.507,-630.613	0/0:77:77,0:77:2726:0:0:0,-23.1793,-245.584	0/0:30:30,0:30:1048:0:0:0,-9.0309,-94.6273	0/1:25:18,7:18:648:7:248:-15.1384,0,-51.1261	0/0:189:189,0:189:6648:0:0:0,-56.8947,-598.403	0/0:180:178,2:178:6272:2:72:0,-47.3487,-557.743	0/0:15:15,0:15:513:0:0:0,-4.51545,-46.4929	0/0:239:238,1:238:8397:1:36:0,-68.3479,-752.133	0/1:273:146,127:146:5194:127:4453:-318.756,0,-385.418	0/0:169:165,4:165:5820:4:144:0,-37.5604,-510.553	0/0:122:120,0:120:4196:0:0:0,-36.1236,-377.523	0/0:259:259,0:259:9149:0:0:0,-77.9668,-823.391	0/0:198:195,3:195:6906:3:108:0,-49.5312,-611.541	0/0:123:123,0:123:4255:0:0:0,-37.0267,-383.129	0/0:74:74,0:74:2603:0:0:0,-22.2762,-234.517	0/1:96:45,50:45:1599:50:1740:-128.061,0,-115.378	0/1:54:32,22:32:1126:22:737:-50.3832,0,-85.3047	0/1:112:56,56:56:1989:56:1960:-142.959,0,-145.376	0/1:163:77,86:77:2692:86:3047:-225.345,0,-193.455	0/0:281:277,4:277:9788:4:136:0,-72.0139,-868.243	0/1:285:113,172:113:4017:172:5996:-453.914,0,-275.926	0/1:58:21,37:21:744:37:1299:-99.7351,0,-49.8246	0/0:186:184,2:184:6399:2:72:0,-49.1634,-568.911	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.895	0/0:198:198,0:198:6933:0:0:0,-59.6039,-624.042	0/1:166:87,79:87:3069:79:2649:-188.667,0,-226.469	0/1:378:190,188:190:6717:188:6582:-478.654,0,-490.82	0/1:100:57,43:57:2006:43:1485:-103.833,0,-150.71	0/1:187:84,103:84:2947:103:3604:-268.255,0,-209.144	0/1:126:60,66:60:2082:66:2245:-164.318,0,-149.718	0/1:318:164,154:164:5729:154:5342:-385.182,0,-420.007	0/1:56:35,21:35:1206:21:718:-48.078,0,-91.9808	0/0:172:170,1:170:5910:1:36:0,-48.2177,-528.441	0/0:196:196,0:196:6861:0:0:0,-59.0019,-617.566	0/0:172:172,0:172:5963:0:0:0,-51.7772,-536.788	0/1:226:128,98:128:4384:98:3435:-241.323,0,-326.706	0/1:163:63,100:63:2231:100:3351:-252.732,0,-151.986	0/0:159:159,0:159:5640:0:0:0,-47.8638,-507.722	0/0:271:271,0:271:9531:0:0:0,-81.5791,-857.764
chr01	2722891	.	G	T	82091.8	PASS	AB=0.513218;ABP=13.5731;AC=39;AF=0.207447;AN=188;AO=3597;CIGAR=1X;DP=15427;DPB=15427;DPRA=1.29057;EPP=7787.76;EPPR=25652.5;GTI=1;LEN=1;MEANALT=1;MQM=59.6706;MQMR=59.9604;NS=94;NUMALT=1;ODDS=0.526729;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128122;QR=417836;RO=11828;RPL=1933;RPP=46.6939;RPPR=359.764;RPR=1664;RUN=1;SAF=1930;SAP=44.7669;SAR=1667;SRF=6607;SRP=355.681;SRR=5221;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:62:62,0:62:2189:0:0:0,-18.6639,-197.274	0/1:154:80,74:80:2817:74:2644:-191.838,0,-207.412	0/0:208:208,0:208:7343:0:0:0,-62.6142,-660.922	0/0:343:343,0:343:12168:0:0:0,-103.253,-1094.97	0/0:17:17,0:17:595:0:0:0,-5.11751,-53.8767	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:219:219,0:219:7763:0:0:0,-65.9256,-698.62	0/0:201:201,0:201:7033:0:0:0,-60.507,-632.419	0/1:214:104,110:104:3662:110:3926:-289.096,0,-265.365	0/0:180:180,0:180:6366:0:0:0,-54.1854,-573.034	0/0:159:159,0:159:5573:0:0:0,-47.8638,-501.698	0/1:271:150,121:150:5252:121:4312:-306.644,0,-391.141	0/1:206:112,94:112:3957:94:3335:-238.319,0,-294.306	0/0:182:182,0:182:6415:0:0:0,-54.7875,-577.445	0/1:192:99,93:99:3531:93:3315:-240.761,0,-260.114	0/0:163:162,0:162:5701:0:0:0,-48.7669,-512.856	0/0:121:121,0:121:4263:0:0:0,-36.4246,-383.359	0/1:102:48,54:48:1668:54:1918:-142.175,0,-119.696	0/0:111:111,0:111:3932:0:0:0,-33.4143,-354.074	0/0:215:215,0:215:7681:0:0:0,-64.7214,-691.325	0/1:278:141,137:141:4929:137:4841:-351.079,0,-360.078	0/1:116:36,80:36:1292:80:2860:-222.704,0,-81.6643	0/0:214:210,4:210:7457:4:140:0,-51.4758,-658.231	0/1:140:70,70:70:2491:70:2516:-183.917,0,-182.299	0/0:110:110,0:110:3892:0:0:0,-33.1133,-350.476	0/0:342:340,2:340:12047:2:72:0,-96.1155,-1077.25	0/1:332:165,167:165:5804:167:5943:-435.027,0,-422.402	0/0:84:84,0:84:2956:0:0:0,-25.2865,-266.274	0/0:407:407,0:407:14345:0:0:0,-122.519,-1290.82	0/0:212:212,0:212:7481:0:0:0,-63.8184,-673.338	0/1:215:103,112:103:3612:112:3996:-295.021,0,-260.563	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:8:2,6:2:68:6:216:-17.374,0,-4.04947	0/1:13:11,2:11:383:2:72:-2.92333,0,-30.8899	0/0:34:33,1:33:1145:1:36:0,-6.63674,-99.7526	0/1:381:179,202:179:6305:202:7170:-530.653,0,-452.854	0/1:137:67,70:67:2336:70:2473:-181.569,0,-169.255	0/1:145:70,75:70:2474:75:2665:-196.428,0,-179.264	0/1:7:5,2:5:172:2:72:-4.72951,0,-13.7108	0/1:277:147,130:147:5272:130:4649:-335.04,0,-391.1	0/0:101:100,0:100:3514:0:0:0,-30.103,-316.112	0/0:183:182,1:182:6390:1:36:0,-51.4902,-571.106	0/0:165:165,0:165:5801:0:0:0,-49.6699,-522.207	0/0:138:138,0:138:4880:0:0:0,-41.5421,-439.357	0/0:177:177,0:177:6289:0:0:0,-53.2823,-566.104	0/1:137:66,71:66:2339:71:2535:-187.149,0,-169.529	0/1:314:179,135:179:6306:135:4797:-337.35,0,-473.116	0/0:153:153,0:153:5430:0:0:0,-46.0576,-488.829	0/1:195:97,98:97:3412:98:3520:-258.212,0,-248.593	0/0:136:136,0:136:4819:0:0:0,-40.9401,-433.809	0/0:11:11,0:11:380:0:0:0,-3.31133,-34.532	0/1:181:79,102:79:2820:102:3659:-274.979,0,-199.553	0/0:130:129,1:129:4594:1:36:0,-35.5356,-410.027	0/0:33:33,0:33:1120:0:0:0,-9.93399,-101.096	0/0:198:198,0:198:6987:0:0:0,-59.6039,-628.897	0/0:77:77,0:77:2735:0:0:0,-23.1793,-246.393	0/0:30:30,0:30:1048:0:0:0,-9.0309,-94.6273	0/1:26:17,9:17:608:9:320:-21.3156,0,-47.2252	0/0:190:190,0:190:6699:0:0:0,-57.1957,-602.991	0/0:190:188,2:188:6627:2:72:0,-50.359,-589.677	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:241:241,0:241:8530:0:0:0,-72.5482,-767.704	0/1:285:145,140:145:5174:140:5016:-365.783,0,-380.007	0/0:173:168,5:168:5960:5:180:0,-35.5261,-519.419	0/0:120:120,0:120:4228:0:0:0,-36.1236,-380.702	0/0:263:261,2:261:9192:2:72:0,-72.3342,-820.424	0/0:199:196,3:196:6921:3:108:0,-49.8322,-612.889	0/0:125:125,0:125:4395:0:0:0,-37.6287,-395.728	0/0:72:72,0:72:2548:0:0:0,-21.6742,-229.569	0/1:99:44,55:44:1572:55:1944:-145.407,0,-111.969	0/1:54:31,23:31:1112:23:815:-57.4151,0,-84.1357	0/1:117:54,63:54:1912:63:2252:-167.722,0,-137.137	0/1:163:74,89:74:2604:89:3166:-236.041,0,-185.54	0/0:286:285,1:285:10025:1:36:0,-82.4963,-898.6	0/1:305:114,191:114:4042:191:6796:-519.86,0,-272.156	0/1:60:21,39:21:735:39:1389:-106.968,0,-48.4096	0/0:186:184,2:184:6491:2:72:0,-49.1634,-577.176	0/0:30:30,0:30:1046:0:0:0,-9.0309,-94.4321	0/0:194:194,0:194:6881:0:0:0,-58.3998,-619.362	0/1:176:86,90:86:3071:90:3207:-235.857,0,-223.637	0/1:403:191,212:191:6754:212:7564:-559.366,0,-486.623	0/1:110:61,49:61:2142:49:1738:-123.58,0,-159.934	0/1:197:83,114:83:2929:114:4070:-307.163,0,-204.514	0/1:143:63,80:63:2219:80:2860:-214.525,0,-156.928	0/1:342:170,172:170:5971:172:6122:-448.064,0,-434.552	0/1:57:35,22:35:1234:22:792:-54.4466,0,-94.2039	0/0:171:170,1:170:6004:1:36:0,-47.8779,-536.875	0/0:198:198,0:198:7030:0:0:0,-59.6039,-632.765	0/0:173:173,0:173:6086:0:0:0,-52.0782,-547.849	0/1:232:126,106:126:4389:106:3769:-269.559,0,-325.347	0/1:176:63,113:63:2244:113:3972:-304.59,0,-149.243	0/0:168:168,0:168:5978:0:0:0,-50.573,-538.128	0/0:277:277,0:277:9837:0:0:0,-83.3853,-885.281
chr01	2855890	.	G	C	47994.6	PASS	AB=0.509469;ABP=7.24585;AC=39;AF=0.207447;AN=188;AO=2787;CIGAR=1X;DP=12778;DPB=12778;DPRA=1.04806;EPP=5951.12;EPPR=20991.5;GTI=0;LEN=1;MEANALT=1.06522;MQM=59.9433;MQMR=59.9849;NS=94;NUMALT=1;ODDS=6.6354;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99776;QR=357262;RO=9983;RPL=12;RPP=5951.12;RPPR=20991.5;RPR=2775;RUN=1;SAF=2787;SAP=6054.9;SAR=0;SRF=9983;SRP=21680.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/1:110:51,59:51:1817:59:2120:-157.955,0,-130.696	0/0:143:142,1:142:5055:1:36:0,-39.449,-451.494	0/0:415:415,0:415:14805:0:0:0,-124.927,-1332.14	0/0:70:69,1:69:2476:1:36:0,-17.4738,-219.495	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.784	0/0:254:254,0:254:9100:0:0:0,-76.4616,-818.971	0/0:201:198,3:198:7062:3:108:0,-50.4319,-625.565	0/1:191:101,90:101:3605:90:3221:-232.614,0,-267.158	0/0:129:129,0:129:4636:0:0:0,-38.8329,-417.401	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/1:162:75,87:75:2696:87:3112:-231.524,0,-194.117	0/1:100:50,50:50:1800:50:1796:-131.819,0,-132.179	0/0:93:93,0:93:3323:0:0:0,-27.9958,-299.283	0/1:117:70,47:70:2508:47:1688:-116.986,0,-190.752	0/0:92:92,0:92:3293:0:0:0,-27.6948,-296.587	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.428	0/1:47:22,25:22:777:25:900:-67.1726,0,-56.102	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/0:161:161,0:161:5765:0:0:0,-48.4658,-518.927	0/1:226:122,104:122:4373:104:3710:-266.056,0,-325.709	0/1:210:69,141:69:2460:141:5027:-389.357,0,-158.436	0/0:250:250,0:250:8928:0:0:0,-75.2575,-803.498	0/1:112:63,49:63:2260:49:1752:-124.249,0,-169.947	0/0:95:95,0:95:3416:0:0:0,-28.5978,-307.653	0/0:500:500,0:500:17875:0:0:0,-150.515,-1608.35	0/1:263:150,113:150:5364:113:4043:-284.886,0,-403.719	0/0:53:53,0:53:1908:0:0:0,-15.9546,-171.998	0/0:387:387,0:387:13868:0:0:0,-116.499,-1247.88	0/0:211:211,0:211:7553:0:0:0,-63.5173,-679.808	0/1:247:125,121:125:4462:121:4320:-314.583,0,-327.374	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:332:181,151:181:6466:151:5432:-389.053,0,-482.082	0/1:196:81,115:81:2916:115:4124:-312.342,0,-203.586	0/1:71:22,49:22:792:49:1748:-136.231,0,-50.2325	0/1:11:8,3:8:280:3:104:-6.39148,0,-22.228	0/1:136:74,62:74:2630:62:2216:-158.76,0,-196.004	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.416	0/0:173:173,0:173:6201:0:0:0,-52.0782,-558.184	0/0:97:97,0:97:3476:0:0:0,-29.1999,-313.051	0/0:80:80,0:80:2876:0:0:0,-24.0824,-259.076	0/0:238:238,0:238:8514:0:0:0,-71.6451,-766.257	0/1:146:77,69:77:2764:69:2460:-177.698,0,-205.051	0/1:249:116,133:116:4144:133:4755:-353.138,0,-298.188	0/0:150:150,0:150:5388:0:0:0,-45.1545,-483.687	0/1:144:66,78:66:2364:78:2792:-208.172,0,-169.67	0/0:173:173,0:173:6205:0:0:0,-52.0782,-558.543	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:119:85,34:85:3060:34:1224:-74.6338,0,-239.805	0/0:107:107,0:107:3821:0:0:0,-32.2102,-344.086	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:163:163,0:163:5799:0:0:0,-49.0679,-522.023	0/0:71:71,0:71:2533:0:0:0,-21.3731,-228.22	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:38:19,19:19:675:19:676:-49.7289,0,-49.6378	0/0:113:113,0:113:4060:0:0:0,-34.0164,-365.586	0/0:155:152,3:152:5472:3:108:0,-36.5845,-482.529	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:338:338,0:338:12037:0:0:0,-101.748,-1083.18	0/1:257:148,109:148:5304:109:3873:-271.389,0,-400.129	0/0:72:69,3:69:2480:3:108:0,-11.599,-213.378	0/0:105:105,0:105:3738:0:0:0,-31.6081,-336.619	0/0:304:303,0:303:10750:0:0:0,-91.2121,-967.047	0/0:234:232,2:232:8300:2:72:0,-63.6043,-740.17	0/0:40:40,0:40:1440:0:0:0,-12.0412,-129.898	0/0:78:78,0:78:2804:0:0:0,-23.4803,-252.599	0/1:63:23,40:23:809:40:1436:-110.573,0,-54.1634	0/1:36:20,15:20:705:15:532:-37.3175,0,-52.8773	0/1:184:84,100:84:3008:100:3583:-267.287,0,-215.562	0/1:118:54,64:54:1940:64:2304:-172.099,0,-139.355	0/0:243:242,0:242:8628:0:0:0,-72.8493,-776.147	0/1:248:127,121:127:4568:121:4340:-316.119,0,-336.628	0/1:83:52,31:52:1868:31:1108:-75.0455,0,-143.413	0/0:89:86,3:86:3092:3:108:0,-16.7165,-268.432	0/0:43:43,0:43:1539:0:0:0,-12.9443,-138.802	0/0:26:26,0:26:921:0:0:0,-7.82678,-83.2052	0/1:149:60,89:60:2156:89:3196:-242.977,0,-149.453	0/1:215:85,130:85:3037:130:4660:-354.84,0,-208.837	0/1:105:53,52:53:1889:52:1872:-137.151,0,-138.678	0/1:100:47,53:47:1688:53:1904:-141.535,0,-122.104	0/1:87:30,57:30:1080:57:2035:-157.23,0,-71.3236	0/1:252:136,115:136:4892:115:4124:-295.425,0,-364.511	0/1:41:17,24:17:612:24:845:-64.0249,0,-43.0712	0/0:109:109,0:109:3901:0:0:0,-32.8123,-351.282	0/0:113:111,0:111:3988:0:0:0,-33.4143,-358.749	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/1:134:56,78:56:2012:78:2800:-211.901,0,-141.015	0/1:126:36,90:36:1292:90:3224:-252.45,0,-78.654	0/0:242:241,0:241:8653:0:0:0,-72.5482,-778.396	0/0:194:194,0:194:6946:0:0:0,-58.3998,-625.202
chr01	3220152	.	A	G	94906.4	PASS	AB=0.468019;ABP=86.2059;AC=39;AF=0.207447;AN=188;AO=4429;CIGAR=1X;DP=21758;DPB=21758;DPRA=1.5374;EPP=9620.46;EPPR=37608.6;GTI=0;LEN=1;MEANALT=1.16949;MQM=56.9826;MQMR=59.9689;NS=94;NUMALT=1;ODDS=6.33311;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=153963;QR=614233;RO=17318;RPL=2054;RPP=53.5298;RPPR=261.573;RPR=2375;RUN=1;SAF=2054;SAP=53.5298;SAR=2375;SRF=7941;SRP=261.573;SRR=9377;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:89:89,0:89:3126:0:0:0,-26.7917,-281.563	0/1:324:158,166:158:5546:166:5795:-423.796,0,-401.738	0/0:332:332,0:332:11802:0:0:0,-99.942,-1062.05	0/0:551:549,2:549:19516:2:72:0,-159.033,-1749.15	0/0:160:160,0:160:5680:0:0:0,-48.1648,-511.322	0/0:118:118,0:118:4159:0:0:0,-35.5215,-374.496	0/0:436:436,0:436:15436:0:0:0,-131.249,-1388.96	0/0:409:405,3:405:14322:3:108:0,-113.075,-1278.65	0/1:157:74,83:74:2629:83:2884:-212.116,0,-189.595	0/0:219:219,0:219:7808:0:0:0,-65.9256,-702.75	0/0:192:192,0:192:6805:0:0:0,-57.7978,-612.528	0/0:170:170,0:170:6007:0:0:0,-51.1751,-540.742	0/1:175:97,78:97:3442:78:2684:-188.978,0,-257.314	0/0:182:180,2:180:6295:2:64:0,-48.7088,-560.571	0/1:146:81,65:81:2892:65:2226:-156.592,0,-216.564	0/0:128:128,0:128:4550:0:0:0,-38.5318,-409.669	0/0:163:163,0:163:5775:0:0:0,-49.0679,-519.861	0/1:154:90,64:90:3185:64:2263:-157.448,0,-240.516	0/0:122:121,1:121:4270:1:36:0,-33.1274,-380.882	0/0:615:608,6:608:21552:6:203:0,-166.593,-1920.36	0/1:273:148,125:148:5227:125:4367:-310.436,0,-388.392	0/1:206:69,137:69:2451:137:4762:-366.161,0,-158.833	0/0:230:229,1:229:8121:1:36:0,-65.6386,-727.203	0/1:243:134,109:134:4766:109:3747:-263.27,0,-355.949	0/0:171:170,1:170:6045:1:36:0,-47.8779,-540.556	0/0:828:825,3:825:29363:3:108:0,-239.178,-2631.73	0/1:518:260,258:260:9227:258:8954:-648.92,0,-674.469	0/0:76:75,1:75:2652:1:36:0,-19.28,-235.327	0/0:671:671,0:671:23737:0:0:0,-201.991,-2135.72	0/0:224:223,1:223:7929:1:36:0,-63.8375,-710.04	0/1:318:182,135:182:6441:135:4698:-326.601,0,-483.91	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:41:41,0:41:1455:0:0:0,-12.3422,-131.245	0/1:14:11,3:11:388:3:108:-5.85141,0,-31.0429	0/0:24:24,0:24:836:0:0:0,-7.22472,-75.5547	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:395:210,185:210:7439:185:6342:-451.685,0,-550.652	0/1:309:175,134:175:6220:134:4663:-325.672,0,-466.881	0/1:173:103,70:103:3655:70:2412:-164.977,0,-277.078	0/1:10:3,7:3:108:7:252:-19.8592,0,-7.06487	0/1:378:219,159:219:7770:159:5568:-386.784,0,-585.542	0/0:101:101,0:101:3583:0:0:0,-30.404,-322.679	0/0:292:292,0:292:10316:0:0:0,-87.9008,-928.375	0/0:192:192,0:192:6811:0:0:0,-57.7978,-613.062	0/0:137:137,0:137:4845:0:0:0,-41.2411,-436.181	0/0:227:227,0:227:8076:0:0:0,-68.3338,-726.813	0/1:224:104,120:104:3705:120:4182:-308.299,0,-266.221	0/1:375:218,157:218:7796:157:5550:-386.23,0,-588.783	0/1:265:135,130:135:4763:130:4528:-327.65,0,-349.056	0/1:302:185,117:185:6606:117:4139:-281.324,0,-503.707	0/0:363:363,0:363:12904:0:0:0,-109.274,-1161.18	0/0:33:33,0:33:1161:0:0:0,-9.93399,-104.794	0/0:331:329,1:329:11725:1:36:0,-96.1014,-1051.52	0/0:160:157,2:157:5588:2:59:0,-42.5989,-497.419	0/0:39:39,0:39:1368:0:0:0,-11.7402,-123.416	0/0:310:308,1:308:10918:1:36:0,-89.7833,-978.921	0/0:139:134,5:134:4766:5:143:0,-28.6898,-415.946	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:40:18,22:18:640:22:765:-57.05,0,-45.8881	0/0:169:169,0:169:5976:0:0:0,-50.8741,-537.891	0/0:247:244,3:244:8679:3:104:0,-64.6516,-771.405	0/0:27:27,0:27:963:0:0:0,-8.12781,-86.9859	0/0:412:412,0:412:14640:0:0:0,-124.024,-1316.59	0/1:455:263,192:263:9330:192:6764:-471.589,0,-702.7	0/1:138:84,54:84:2976:54:1856:-125.598,0,-226.53	0/0:203:203,0:203:7216:0:0:0,-61.1091,-649.491	0/0:515:511,4:511:18196:4:144:0,-141.724,-1623.93	0/0:269:265,4:265:9349:4:144:0,-67.6706,-828.079	0/0:84:84,0:84:2991:0:0:0,-25.2865,-269.422	0/0:200:200,0:200:7128:0:0:0,-60.206,-641.576	0/1:182:96,86:96:3352:86:2988:-214.129,0,-247.024	0/1:60:29,31:29:1036:31:1082:-79.4251,0,-75.4921	0/1:178:91,87:91:3220:87:3016:-217.888,0,-236.439	0/1:122:67,55:67:2362:55:1920:-136.239,0,-176.11	0/0:423:420,2:420:14885:2:72:0,-120.558,-1332.43	0/1:453:241,212:241:8565:212:7406:-529.338,0,-634.483	0/1:272:134,138:134:4740:138:4804:-349.809,0,-344.823	0/1:262:153,109:153:5432:109:3747:-258.119,0,-410.134	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:272:271,1:271:9597:1:36:0,-78.287,-860.099	0/1:303:179,123:179:6356:123:4320:-297.307,0,-480.901	0/1:587:294,291:294:10411:291:10167:-737.385,0,-760.449	0/1:226:124,102:124:4394:102:3550:-251.567,0,-327.559	0/1:174:87,87:87:3070:87:3002:-217.646,0,-224.149	0/1:204:103,100:103:3639:100:3420:-246.484,0,-266.284	0/1:314:165,149:165:5825:149:5096:-364.013,0,-429.845	0/1:93:43,50:43:1524:50:1701:-124.581,0,-109.457	0/0:136:136,0:136:4844:0:0:0,-40.9401,-436.114	0/0:154:154,0:154:5450:0:0:0,-46.3586,-490.632	0/0:153:153,0:153:5417:0:0:0,-46.0576,-487.664	0/1:208:98,110:98:3415:110:3790:-278.299,0,-244.949	0/1:135:52,83:52:1844:83:2877:-218.234,0,-125.601	0/0:285:285,0:285:10086:0:0:0,-85.7935,-907.309	0/0:261:259,2:259:9247:2:59:0,-72.9647,-826.595
chr01	3220172	.	CAGGA	CAGGG,TAGGG	251717	PASS	AB=0.5144,0.4758;ABP=12.0158,28.4443;AC=149,39;AF=0.792553,0.207447;AN=188;AO=9236,2391;CIGAR=4M1X,1X3M1X;DP=11726;DPB=11725.8;DPRA=0,1.3028;EPP=19738.6,5091.29;EPPR=7.35324;GTI=0;LEN=1,5;MEANALT=2.38298,3.1087;MQM=59.977,54.721;MQMR=60;NS=94;NUMALT=2;ODDS=8.75797;PAIRED=0,0;PAIREDR=0;PAO=0,1;PQA=0,32;PQR=0;PRO=0;QA=327923,83180;QR=71;RO=2;RPL=9199,2379;RPP=19738.6,5091.29;RPPR=7.35324;RPR=37,12;RUN=1,1;SAF=0,0;SAP=20058.7,5195;SAR=9236,2391;SRF=0;SRP=7.35324;SRR=2;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:26:0,26,0:0:0:26,0:916,0:-82.7555,-7.82678,0,-82.7555,-7.82678,-82.7555	1/2:178:0,84,94:0:0:84,94:2999,3226:-506.426,-261.921,-236.635,-244.855,0,-216.558	1/1:196:0,195,0:0:0:195,0:6902,0:-620.893,-58.7009,0,-620.893,-58.7009,-620.893	1/1:318:0,317,1:0:0:317,1:11347,36:-1020.75,-95.4265,0,-1017.81,-92.1319,-1017.51	1/1:71:0,69,0:0:0:69,0:2446,0:-220.035,-20.7711,0,-220.035,-20.7711,-220.035	1/1:44:0,44,0:0:0:44,0:1566,0:-141.231,-13.2453,0,-141.231,-13.2453,-141.231	1/1:187:0,186,0:0:0:186,0:6563,0:-590.431,-55.9916,0,-590.431,-55.9916,-590.431	1/1:235:0,234,0:0:0:234,0:8250,0:-742.142,-70.441,0,-742.142,-70.441,-742.142	1/2:67:0,25,42:0:0:25,42:900,1476:-193.5,-120.061,-112.536,-73.7953,0,-61.152	1/1:66:0,66,0:0:0:66,0:2331,0:-210.05,-19.868,0,-210.05,-19.868,-210.05	1/1:123:0,122,0:0:0:122,0:4380,0:-394.012,-36.7257,0,-394.012,-36.7257,-394.012	1/1:85:0,85,0:0:0:85,0:3015,0:-271.582,-25.5876,0,-271.582,-25.5876,-271.582	1/2:85:0,47,37:0:0:47,37:1667,1305:-241.973,-106.158,-92.0097,-135.818,0,-124.68	1/1:137:0,136,0:0:0:136,0:4848,0:-436.134,-40.9401,0,-436.134,-40.9401,-436.134	1/2:70:0,41,28:0:0:41,28:1472,972:-199.027,-78.9448,-66.6025,-120.074,0,-111.646	1/1:72:0,71,0:0:0:71,0:2516,0:-226.39,-21.3731,0,-226.39,-21.3731,-226.39	1/1:110:0,109,0:0:0:109,0:3880,0:-349.08,-32.8123,0,-349.08,-32.8123,-349.08	1/2:74:0,37,37:0:0:37,37:1332,1303:-214.916,-106.228,-95.0896,-109.044,0,-97.9062	1/1:82:0,82,0:0:0:82,0:2913,0:-262.403,-24.6845,0,-262.403,-24.6845,-262.403	1/1:323:0,321,2:0:0:321,2:11352,66:-1021.24,-96.6306,0,-1015.91,-90.9678,-1015.31	1/2:126:0,68,58:0:0:68,58:2391,2019:-358.878,-164.249,-143.779,-194.978,0,-177.519	1/2:128:0,38,90:0:0:38,90:1348,3113:-362.561,-252.732,-241.293,-110.181,0,-83.0884	1/1:145:0,143,0:0:0:143,0:5060,0:-455.299,-43.0473,0,-455.299,-43.0473,-455.299	1/2:104:0,57,45:0:0:57,45:2017,1575:-291.855,-127.562,-110.403,-164.333,0,-150.787	1/1:82:0,80,0:0:0:80,0:2840,0:-255.578,-24.0824,0,-255.578,-24.0824,-255.578	1/1:447:0,445,0:0:0:445,0:15831,0:-1424.23,-133.958,0,-1424.23,-133.958,-1424.23	1/2:229:0,108,120:0:0:108,120:3841,4168:-651.295,-338.27,-305.758,-313.017,0,-276.894	1/1:30:0,30,0:0:0:30,0:1060,0:-95.7113,-9.0309,0,-95.7113,-9.0309,-95.7113	1/1:371:0,369,0:0:0:369,0:13123,0:-1180.55,-111.08,0,-1180.55,-111.08,-1180.55	1/1:105:0,100,1:0:0:100,1:3573,36:-321.482,-30.103,0,-318.549,-27.1533,-318.248	1/2:218:0,111,105:0:0:111,105:3972,3643:-619.586,-295.681,-262.267,-323.956,0,-292.348	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:26:0,26,0:0:0:26,0:920,0:-83.1171,-7.82678,0,-83.1171,-7.82678,-83.1171	1/2:8:0,5,3:0:0:5,3:180,108:-23.85,-9.16274,-7.65759,-15.0469,0,-14.1438	1/1:17:0,17,0:0:0:17,0:604,0:-54.6906,-5.11751,0,-54.6906,-5.11751,-54.6906	1/1:17:0,17,0:0:0:17,0:600,0:-54.3292,-5.11751,0,-54.3292,-5.11751,-54.3292	1/2:192:1,106,84:1:35:106,84:3760,2944:-542.493,-236.455,-207.393,-303.489,0,-281.05	1/2:168:0,94,70:0:0:94,70:3327,2448:-469.515,-198.513,-170.217,-271.013,0,-249.941	1/2:105:0,59,45:0:0:59,45:2066,1558:-294.393,-126.294,-108.533,-168.087,0,-154.541	1/2:10:0,3,7:0:0:3,7:108,251:-29.4856,-20.6721,-19.7691,-9.17208,0,-7.06487	1/2:211:0,111,99:0:0:111,99:3920,3462:-600.383,-281.153,-247.739,-319.222,0,-289.42	1/1:49:0,49,0:0:0:49,0:1760,0:-158.684,-14.7505,0,-158.684,-14.7505,-158.684	1/1:149:0,149,0:0:0:149,0:5259,0:-473.448,-44.8535,0,-473.448,-44.8535,-473.448	1/1:97:0,97,0:0:0:97,0:3456,0:-311.25,-29.1999,0,-311.25,-29.1999,-311.25	1/1:69:0,69,0:0:0:69,0:2436,0:-219.497,-20.7711,0,-219.497,-20.7711,-219.497	1/1:76:0,75,0:0:0:75,0:2651,0:-238.469,-22.5773,0,-238.469,-22.5773,-238.469	1/2:125:0,61,63:0:0:61,63:2179,2208:-356.828,-179.168,-160.805,-177.707,0,-158.742	1/2:194:0,91,102:0:0:91,102:3223,3554:-551.17,-288.629,-261.235,-262.544,0,-231.839	1/2:130:0,69,61:0:0:69,61:2402,2102:-366.238,-170.919,-150.148,-195.665,0,-177.302	1/2:189:0,106,79:0:0:106,79:3744,2764:-529.502,-224.599,-192.69,-304.943,0,-281.161	1/1:199:0,199,0:0:0:199,0:7028,0:-632.585,-59.905,0,-632.585,-59.905,-632.585	1/1:24:0,23,0:0:0:23,0:824,0:-74.1238,-6.92369,0,-74.1238,-6.92369,-74.1238	1/1:162:0,160,0:0:0:160,0:5685,0:-511.442,-48.1648,0,-511.442,-48.1648,-511.442	1/1:109:0,108,0:0:0:108,0:3835,0:-345.009,-32.5112,0,-345.009,-32.5112,-345.009	1/1:17:0,17,0:0:0:17,0:600,0:-54.3292,-5.11751,0,-54.3292,-5.11751,-54.3292	1/1:166:0,159,1:0:0:159,1:5609,31:-504.594,-47.8638,0,-502.106,-45.3818,-501.805	1/1:64:0,64,0:0:0:6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chr01	3247964	.	T	A	163804	PASS	AB=0.484995;ABP=13.1109;AC=149;AF=0.792553;AN=188;AO=8520;CIGAR=1X;DP=11194;DPB=11194;DPRA=0;EPP=18504;EPPR=5794.33;GTI=1;LEN=1;MEANALT=1.06383;MQM=47.1958;MQMR=59.3221;NS=94;NUMALT=1;ODDS=1.711;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=288641;QR=95664;RO=2667;RPL=0;RPP=18504;RPPR=5794.33;RPR=8520;RUN=1;SAF=8520;SAP=18504;SAR=0;SRF=2667;SRP=5794.33;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:101:0,101:0:0:101:3116:-276.991,-30.404,0	0/1:86:42,44:42:1504:44:1451:-103.787,0,-109.766	1/1:217:1,216:1:36:216:7491:-664.692,-61.7252,0	1/1:248:0,248:0:0:248:8641:-769.185,-74.6554,0	1/1:63:1,62:1:36:62:2038:-179.059,-15.3666,0	1/1:32:0,32:0:0:32:1048:-93.7858,-9.63296,0	1/1:104:0,102:0:0:102:3522:-313.908,-30.7051,0	1/1:123:0,123:0:0:123:4232:-377.854,-37.0267,0	0/1:159:64,95:64:2265:95:3131:-232.116,0,-156.173	1/1:67:0,67:0:0:67:2351:-208.26,-20.169,0	1/1:35:0,35:0:0:35:1187:-106.322,-10.5361,0	1/1:95:0,95:0:0:95:3374:-300.174,-28.5979,0	0/1:70:35,35:35:1260:35:1237:-89.6853,0,-92.5982	1/1:49:0,49:0:0:49:1578:-140.646,-14.7505,0	0/1:81:44,37:44:1580:37:1324:-93.7251,0,-118.076	1/1:44:0,44:0:0:44:1504:-134.818,-13.2453,0	1/1:23:0,23:0:0:23:782:-69.9718,-6.92369,0	0/1:33:21,12:21:756:12:413:-27.0768,0,-58.4332	1/1:17:0,17:0:0:17:544:-49.0543,-5.11751,0	1/1:278:0,278:0:0:278:9629:-854.385,-83.6863,0	0/1:683:320,363:320:11469:363:10943:-772.465,0,-825.854	0/1:151:110,41:110:3956:41:1429:-81.3406,0,-310.414	1/1:229:0,229:0:0:229:7653:-681.75,-68.9359,0	0/1:74:42,31:42:1508:31:1064:-72.1785,0,-113.31	1/1:95:1,94:1:36:94:3314:-291.619,-24.9996,0	1/1:185:0,185:0:0:185:6343:-563.28,-55.6906,0	0/1:286:127,159:127:4556:159:5394:-395.957,0,-324.037	1/1:35:0,35:0:0:35:1181:-105.923,-10.5361,0	1/1:282:0,282:0:0:282:9849:-873.169,-84.8905,0	1/1:200:0,200:0:0:200:6710:-599.081,-60.206,0	0/1:181:85,96:85:3044:96:3349:-242.846,0,-219.273	1/1:5:0,5:0:0:5:176:-16.0843,-1.50515,0	1/1:52:0,52:0:0:52:1634:-146.264,-15.6536,0	0/1:10:6,4:6:212:4:144:-10.2311,0,-16.4145	1/1:10:0,10:0:0:10:356:-32.2143,-3.0103,0	1/1:40:0,40:0:0:40:1325:-118.891,-12.0412,0	0/1:213:119,94:119:4264:94:3235:-223.772,0,-319.538	0/1:182:96,86:96:3452:86:2877:-202.202,0,-255.682	0/1:54:32,22:32:1148:22:769:-52.622,0,-87.0562	0/1:4:1,3:1:36:3:108:-8.8015,0,-2.39415	0/1:188:47,141:47:1684:141:4808:-372.409,0,-95.1979	1/1:18:0,18:0:0:18:625:-56.2052,-5.41854,0	1/1:197:0,197:0:0:197:6479:-579.44,-59.3029,0	1/1:71:0,71:0:0:71:2464:-219.793,-21.3731,0	1/1:35:0,35:0:0:35:1162:-103.359,-10.5361,0	1/1:180:3,176:3:108:176:6129:-534.306,-44.1667,0	0/1:150:92,58:92:3300:58:1930:-127.983,0,-251.641	0/1:122:37,85:37:1320:85:2900:-221.727,0,-82.3479	0/1:89:45,44:45:1612:44:1537:-110.758,0,-118.536	0/1:126:70,56:70:2520:56:1955:-135.653,0,-189.035	1/1:144:0,144:0:0:144:5087:-451.701,-43.3483,0	1/1:13:0,13:0:0:13:460:-41.0538,-3.91339,0	1/1:218:0,217:0:0:217:7315:-650.293,-65.3235,0	1/1:108:0,108:0:0:108:3719:-329.458,-32.5112,0	1/1:13:0,13:0:0:13:448:-40.4715,-3.91339,0	1/1:180:0,180:0:0:180:6186:-551.22,-54.1854,0	1/1:64:0,64:0:0:64:2133:-190.482,-19.2659,0	1/1:16:0,16:0:0:16:576:-51.7188,-4.81648,0	0/1:27:8,19:8:288:19:668:-51.8442,0,-18.1396	1/1:143:0,143:0:0:143:4828:-430.209,-43.0473,0	1/1:97:1,96:1:36:96:3360:-295.75,-25.6016,0	1/1:16:0,16:0:0:16:561:-50.0509,-4.81648,0	1/1:249:0,249:0:0:249:8690:-773.383,-74.9565,0	0/1:251:139,111:139:4988:111:3868:-267.741,0,-373.311	0/1:65:32,33:32:1137:33:1150:-83.2696,0,-83.0251	1/1:87:0,87:0:0:87:3002:-266.764,-26.1896,0	1/1:348:3,345:3:108:345:11036:-972.946,-94.6833,0	1/1:192:0,192:0:0:192:6501:-578.139,-57.7978,0	1/1:20:0,20:0:0:20:644:-57.9514,-6.0206,0	1/1:71:0,71:0:0:71:2468:-220.968,-21.3731,0	0/1:47:29,18:29:1044:18:625:-41.4531,0,-80.0814	0/1:31:19,12:19:684:12:428:-28.8564,0,-52.5299	0/1:235:132,103:132:4733:103:3590:-250.07,0,-354.657	0/1:87:32,55:32:1148:55:1923:-146.276,0,-77.4146	1/1:398:0,398:0:0:398:12873:-1145.93,-119.81,0	0/1:234:132,102:132:4744:102:3564:-246.848,0,-356.238	0/1:75:42,33:42:1508:33:1142:-79.815,0,-113.376	0/1:100:45,55:45:1612:55:1949:-143.141,0,-115.235	1/1:13:0,13:0:0:13:404:-36.5063,-3.91339,0	1/1:137:0,137:0:0:137:4700:-419.947,-41.2411,0	0/1:115:71,44:71:2552:44:1452:-95.7533,0,-194.819	0/1:341:167,173:167:6000:173:6098:-440.985,0,-437.138	0/1:51:35,16:35:1256:16:541:-33.3186,0,-97.9928	0/1:72:36,36:36:1296:36:1262:-91.2535,0,-95.2249	0/1:61:33,28:33:1188:28:944:-66.229,0,-88.8634	0/1:138:79,59:79:2836:59:2024:-138.505,0,-213.818	0/1:30:21,9:21:752:9:320:-19.9095,0,-58.9577	1/1:71:0,71:0:0:71:2298:-206.185,-21.3731,0	1/1:81:0,81:0:0:81:2805:-250.827,-24.3834,0	1/1:38:0,38:0:0:38:1261:-113.141,-11.4391,0	0/1:149:84,65:84:3016:65:2181:-150.206,0,-226.771	0/1:114:86,28:86:3076:28:932:-48.9003,0,-242.669	1/1:109:0,109:0:0:109:3623:-322.62,-32.8123,0	1/1:73:0,73:0:0:73:2567:-229.02,-21.9752,0
chr01	3247988	.	T	C	45602.6	PASS	AB=0.501684;ABP=3.14195;AC=39;AF=0.207447;AN=188;AO=2692;CIGAR=1X;DP=11704;DPB=11704;DPRA=1.2766;EPP=5831.26;EPPR=19515.9;GTI=1;LEN=1;MEANALT=1.1087;MQM=59.3035;MQMR=47.2164;NS=94;NUMALT=1;ODDS=1.15782;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96409;QR=322856;RO=9002;RPL=2;RPP=5831.26;RPPR=19515.9;RPR=2690;RUN=1;SAF=2692;SAP=5848.61;SAR=0;SRF=9002;SRP=19550.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:109:109,0:109:3889:0:0:0,-32.8123,-344.188	0/1:88:46,42:46:1656:42:1508:-109.524,0,-121.14	0/0:225:224,1:224:8018:1:36:0,-64.1335,-710.41	0/0:268:268,0:268:9583:0:0:0,-80.676,-852.978	0/0:70:69,1:69:2480:1:36:0,-17.4738,-218.342	0/0:33:33,0:33:1188:0:0:0,-9.93399,-106.05	0/0:115:115,0:115:4128:0:0:0,-34.6184,-368.184	0/0:133:133,0:133:4780:0:0:0,-40.037,-426.332	0/1:166:106,60:106:3804:60:2156:-144.279,0,-290.592	0/0:66:66,0:66:2345:0:0:0,-19.868,-208.026	0/0:38:37,1:37:1328:1:36:0,-7.87233,-114.907	0/0:100:100,0:100:3600:0:0:0,-30.103,-319.541	0/1:72:37,35:37:1332:35:1256:-91.6359,0,-97.5717	0/0:50:50,0:50:1788:0:0:0,-15.0515,-159.392	0/1:80:37,43:37:1332:43:1527:-113.608,0,-94.7128	0/0:45:45,0:45:1616:0:0:0,-13.5463,-144.461	0/0:24:24,0:24:860:0:0:0,-7.22472,-76.9196	0/1:33:12,21:12:432:21:756:-58.4332,0,-28.7724	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.5701	0/0:292:291,0:291:10433:0:0:0,-87.5997,-923.879	0/1:724:396,328:396:14179:328:11750:-838.806,0,-1045.72	0/1:155:43,112:43:1525:112:4008:-313.85,0,-88.4537	0/0:245:245,0:245:8763:0:0:0,-73.7523,-779.704	0/1:77:34,42:34:1220:42:1512:-113.204,0,-84.932	0/0:97:96,1:96:3452:1:36:0,-25.6016,-303.67	0/0:203:203,0:203:7289:0:0:0,-61.1091,-646.099	0/1:294:164,130:164:5892:130:4653:-330.345,0,-437.306	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.025	0/0:299:299,0:299:10748:0:0:0,-90.008,-952.457	0/0:208:208,0:208:7423:0:0:0,-62.6142,-659.942	0/1:193:108,85:108:3865:85:3035:-215.193,0,-285.023	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.4378	0/0:53:53,0:53:1904:0:0:0,-15.9546,-170.178	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.2311	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.4853	0/0:41:41,0:41:1476:0:0:0,-12.3422,-132.282	0/1:219:99,119:99:3545:119:4259:-317.038,0,-249.733	0/1:194:96,98:96:3444:98:3509:-257.512,0,-248.815	0/1:56:24,32:24:860:32:1135:-85.4702,0,-60.1506	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.8015	0/1:193:145,48:145:5204:48:1708:-95.8619,0,-405.978	0/0:20:20,0:20:720:0:0:0,-6.0206,-64.3917	0/0:204:204,0:204:7344:0:0:0,-61.4101,-654.906	0/0:75:75,0:75:2692:0:0:0,-22.5772,-240.004	0/0:36:36,0:36:1292:0:0:0,-10.8371,-115.212	0/0:191:188,3:188:6744:3:108:0,-47.4216,-587.825	0/1:150:58,92:58:2088:92:3282:-250.355,0,-142.008	0/1:133:94,39:94:3380:39:1395:-85.3369,0,-259.745	0/1:93:47,46:47:1688:46:1641:-119.939,0,-122.95	0/1:131:61,69:61:2184:69:2476:-183.609,0,-154.489	0/0:150:150,0:150:5384:0:0:0,-45.1545,-477.772	0/0:13:13,0:13:468:0:0:0,-3.91339,-41.7442	0/0:228:228,0:228:8174:0:0:0,-68.6348,-727.375	0/0:114:114,0:114:4084:0:0:0,-34.3174,-361.907	0/0:16:16,0:16:576:0:0:0,-4.81648,-51.8921	0/0:186:185,0:185:6660:0:0:0,-55.6905,-592.689	0/0:65:65,0:65:2340:0:0:0,-19.5669,-208.706	0/0:16:16,0:16:576:0:0:0,-4.81648,-51.7188	0/1:28:19,9:19:684:9:324:-20.7029,0,-52.9203	0/0:156:156,0:156:5569:0:0:0,-46.9607,-495.867	0/0:110:109,1:109:3920:1:36:0,-29.515,-345.602	0/0:16:16,0:16:576:0:0:0,-4.81648,-51.3811	0/0:257:256,0:256:9204:0:0:0,-77.0637,-818.479	0/1:258:116,142:116:4130:142:5085:-379.967,0,-288.709	0/1:69:35,32:35:1260:32:1152:-83.5113,0,-92.4733	0/0:90:90,0:90:3217:0:0:0,-27.0927,-285.751	0/0:365:362,3:362:12953:3:108:0,-99.8008,-1139.95	0/0:202:201,0:201:7212:0:0:0,-60.507,-639.746	0/0:22:22,0:22:784:0:0:0,-6.62266,-69.9469	0/0:75:75,0:75:2700:0:0:0,-22.5772,-240.461	0/1:49:20,29:20:716:29:1044:-79.4794,0,-48.9441	0/1:34:13,21:13:468:21:756:-58.0753,0,-31.5092	0/1:242:111,131:111:3992:131:4691:-349.077,0,-282.523	0/1:90:58,32:58:2065:32:1140:-75.7804,0,-158.041	0/0:422:422,0:422:15097:0:0:0,-127.035,-1340.41	0/1:238:106,132:106:3812:132:4748:-355.419,0,-267.044	0/1:78:35,42:35:1260:42:1512:-112.834,0,-89.6132	0/1:102:57,45:57:2052:45:1612:-114.633,0,-151.712	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.4618	0/0:141:141,0:141:5072:0:0:0,-42.4452,-452.776	0/1:117:44,73:44:1584:73:2617:-199.772,0,-106.851	0/1:342:175,167:175:6258:167:5977:-434.765,0,-454.839	0/1:52:18,34:18:648:34:1224:-94.8135,0,-42.5093	0/1:72:36,36:36:1296:36:1296:-95.2249,0,-94.2472	0/1:63:30,33:30:1072:33:1188:-88.2614,0,-77.0146	0/1:139:60,79:60:2160:79:2836:-213.517,0,-150.159	0/1:34:12,22:12:428:22:792:-61.353,0,-28.4109	0/0:80:80,0:80:2872:0:0:0,-24.0824,-257.058	0/0:83:83,0:83:2988:0:0:0,-24.9855,-266.804	0/0:39:39,0:39:1404:0:0:0,-11.7402,-125.518	0/1:154:68,86:68:2444:86:3076:-230.657,0,-171.801	0/1:118:30,88:30:1080:88:3125:-245.88,0,-60.7965	0/0:112:112,0:112:4028:0:0:0,-33.7154,-357.841	0/0:76:76,0:76:2732:0:0:0,-22.8783,-243.684
chr01	3247999	.	G	A	188926	PASS	AB=0.502931;ABP=3.40485;AC=149;AF=0.792553;AN=188;AO=8974;CIGAR=1X;DP=11614;DPB=11614;DPRA=0;EPP=19429;EPPR=5735.7;GTI=1;LEN=1;MEANALT=1;MQM=47.2098;MQMR=59.4057;NS=94;NUMALT=1;ODDS=0.0298468;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=321645;QR=94075;RO=2640;RPL=8967;RPP=19429;RPPR=5735.7;RPR=7;RUN=1;SAF=8974;SAP=19489.8;SAR=0;SRF=2640;SRP=5735.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:105:0,105:0:0:105:3759:-333.033,-31.6082,0	0/1:88:42,46:42:1512:46:1643:-120.24,0,-109.884	1/1:224:1,223:1:36:223:7992:-708.545,-63.8324,0	1/1:264:0,264:0:0:264:9452:-841.158,-79.4719,0	1/1:70:1,69:1:32:69:2476:-218.395,-17.8728,0	1/1:32:0,32:0:0:32:1152:-102.829,-9.63296,0	1/1:114:0,114:0:0:114:4084:-364.047,-34.3174,0	1/1:133:0,133:0:0:133:4771:-425.274,-40.037,0	0/1:162:57,105:57:2036:105:3761:-287.943,0,-134.706	1/1:66:0,66:0:0:66:2355:-209.251,-19.868,0	1/1:38:0,38:0:0:38:1368:-122.038,-11.4391,0	1/1:101:0,101:0:0:101:3628:-322.066,-30.404,0	0/1:71:34,37:34:1208:37:1328:-97.5231,0,-87.6353	1/1:50:0,50:0:0:50:1767:-157.528,-15.0515,0	0/1:81:44,37:44:1536:37:1328:-94.065,0,-114.116	1/1:45:0,45:0:0:45:1607:-143.67,-13.5464,0	1/1:25:0,25:0:0:25:900:-80.4908,-7.52575,0	0/1:33:21,12:21:752:12:428:-28.4206,0,-58.0723	1/1:19:0,19:0:0:19:680:-61.2195,-5.71957,0	1/1:291:0,291:0:0:291:10435:-925.751,-87.5997,0	0/1:710:321,389:321:11412:389:13893:-1024.69,0,-812.745	0/1:151:106,45:106:3807:45:1616:-98.0716,0,-297.107	1/1:246:0,246:0:0:246:8808:-783.739,-74.0534,0	0/1:76:41,35:41:1468:35:1248:-87.5997,0,-109.537	1/1:100:1,99:1:36:99:3542:-312.24,-26.5047,0	1/1:202:0,202:0:0:202:7232:-641.469,-60.8081,0	0/1:291:128,163:128:4580:163:5848:-434.301,0,-324.534	1/1:37:0,37:0:0:37:1328:-119.025,-11.1381,0	1/1:298:0,298:0:0:298:10712:-948.895,-89.7069,0	1/1:205:0,205:0:0:205:7357:-654.082,-61.7112,0	0/1:195:85,110:85:3031:110:3939:-290.964,0,-214.231	1/1:5:0,5:0:0:5:180:-16.4378,-1.50515,0	1/1:52:0,52:0:0:52:1872:-167.309,-15.6536,0	0/1:10:6,4:6:216:4:144:-10.2311,0,-16.7802	1/1:11:0,11:0:0:11:392:-35.283,-3.31133,0	1/1:43:0,43:0:0:43:1548:-138.728,-12.9443,0	0/1:219:117,102:117:4156:102:3656:-259.626,0,-308.042	0/1:192:98,94:98:3504:94:3376:-243.336,0,-257.353	0/1:54:30,24:30:1068:24:860:-60.7527,0,-80.1764	0/1:4:1,3:1:36:3:108:-8.8015,0,-2.39415	0/1:189:47,142:47:1656:142:5096:-397.46,0,-92.3747	1/1:19:0,19:0:0:19:680:-60.8277,-5.71957,0	1/1:201:1,200:1:36:200:7158:-635.352,-56.9088,0	1/1:74:0,74:0:0:74:2656:-236.788,-22.2762,0	1/1:37:0,37:0:0:37:1324:-117.9,-11.1381,0	1/1:189:3,186:3:108:186:6674:-582.669,-46.8195,0	0/1:151:91,60:91:3249:60:2139:-146.308,0,-247.064	0/1:131:38,93:38:1338:93:3336:-256.443,0,-81.2529	0/1:92:44,48:44:1572:48:1724:-126.461,0,-114.063	0/1:132:71,61:71:2536:61:2178:-154.086,0,-188.669	1/1:152:0,152:0:0:152:5448:-483.612,-45.7566,0	1/1:13:0,13:0:0:13:468:-41.7442,-3.91339,0	1/1:229:0,229:0:0:229:8216:-730.379,-68.9359,0	1/1:114:0,114:0:0:114:4092:-362.43,-34.3174,0	1/1:16:0,16:0:0:16:572:-51.5411,-4.81648,0	1/1:184:0,184:0:0:184:6616:-589.495,-55.3895,0	1/1:65:0,65:0:0:65:2320:-207.154,-19.567,0	1/1:16:0,16:0:0:16:576:-51.7188,-4.81648,0	0/1:27:8,19:8:288:19:684:-53.2214,0,-18.1396	1/1:155:0,155:0:0:155:5552:-493.232,-46.6597,0	1/1:110:1,109:1:36:109:3920:-345.602,-29.515,0	1/1:16:0,16:0:0:16:572:-51.0365,-4.81648,0	1/1:255:0,255:0:0:255:9156:-814.508,-76.7627,0	0/1:256:140,116:140:4983:116:4155:-291.468,0,-371.414	0/1:69:33,36:33:1180:36:1281:-93.7394,0,-85.6921	1/1:88:0,88:0:0:88:3164:-281.317,-26.4906,0	1/1:356:3,353:3:108:353:12658:-1113.76,-97.0915,0	1/1:203:0,203:0:0:203:7267:-644.579,-61.1091,0	1/1:22:0,22:0:0:22:792:-70.642,-6.62266,0	1/1:74:0,74:0:0:74:2660:-237.039,-22.2762,0	0/1:48:28,20:28:1008:20:720:-49.598,0,-76.542	0/1:33:20,13:20:708:13:468:-31.8102,0,-54.1	0/1:240:130,110:130:4601:110:3952:-279.768,0,-341.646	0/1:86:29,57:29:1035:57:2032:-156.174,0,-67.5559	1/1:419:0,419:0:0:419:14977:-1330.23,-126.132,0	0/1:236:127,109:127:4543:109:3908:-276.505,0,-337.686	0/1:76:41,35:41:1464:35:1260:-90.2146,0,-109.135	0/1:102:44,58:44:1572:58:2080:-154.235,0,-111.035	1/1:14:0,14:0:0:14:504:-45.4618,-4.21442,0	1/1:138:0,138:0:0:138:4941:-441.189,-41.5421,0	0/1:113:69,44:69:2468:44:1580:-107.709,0,-187.866	0/1:344:167,177:167:5967:177:6344:-462.157,0,-433.293	0/1:50:32,18:32:1148:18:648:-43.1114,0,-88.5783	0/1:71:35,36:35:1256:36:1296:-94.5483,0,-91.9722	0/1:63:33,30:33:1188:30:1080:-77.7104,0,-88.2614	0/1:140:79,61:79:2824:61:2196:-153.068,0,-212.137	0/1:34:22,12:22:784:12:428:-28.4109,0,-60.6312	1/1:80:0,80:0:0:80:2851:-255.216,-24.0824,0	1/1:84:0,84:0:0:84:3013:-269.184,-25.2865,0	1/1:40:0,40:0:0:40:1432:-128.045,-12.0412,0	0/1:154:85,69:85:2982:69:2480:-175.017,0,-222.207	0/1:115:85,30:85:3011:30:1080:-61.6996,0,-236.548	1/1:110:0,110:0:0:110:3944:-350.517,-33.1133,0	1/1:76:0,76:0:0:76:2724:-242.977,-22.8783,0
chr01	3248010	.	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chr01	3747538	.	T	C	57884.9	PASS	AB=0.532974;ABP=62.5833;AC=40;AF=0.212766;AN=188;AO=3383;CIGAR=1X;DP=13075;DPB=13075;DPRA=1.92114;EPP=7349.1;EPPR=21048.9;GTI=2;LEN=1;MEANALT=1;MQM=59.6364;MQMR=59.9487;NS=94;NUMALT=1;ODDS=1.15119;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120867;QR=341349;RO=9692;RPL=0;RPP=7349.1;RPPR=21048.9;RPR=3383;RUN=1;SAF=0;SAP=7349.1;SAR=3383;SRF=0;SRP=21048.9;SRR=9692;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:115:115,0:115:3993:0:0:0,-34.6184,-359.569	0/1:125:63,62:63:2213:62:2220:-162.403,0,-161.805	0/0:222:222,0:222:7847:0:0:0,-66.8287,-706.272	0/0:225:225,0:225:7892:0:0:0,-67.7317,-710.327	0/0:84:81,3:81:2852:3:108:0,-15.2198,-246.854	0/0:39:39,0:39:1338:0:0:0,-11.7402,-120.714	0/0:109:109,0:109:3811:0:0:0,-32.8123,-343.036	0/0:276:275,1:275:9708:1:36:0,-79.486,-869.72	0/1:192:99,93:99:3517:93:3301:-239.476,0,-258.538	0/0:123:123,0:123:4354:0:0:0,-37.0267,-392.039	0/0:57:57,0:57:2020:0:0:0,-17.1587,-182.073	0/0:79:79,0:79:2772:0:0:0,-23.7814,-249.724	0/1:79:39,40:39:1380:40:1432:-105.341,0,-100.603	0/0:100:100,0:100:3563:0:0:0,-30.103,-320.874	0/1:81:45,36:45:1588:36:1277:-90.8477,0,-118.827	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.111	0/0:32:32,0:32:1136:0:0:0,-9.63296,-102.541	0/1:35:14,21:14:504:21:743:-56.6573,0,-35.162	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:161:159,2:159:5563:2:72:0,-41.6291,-493.971	0/1:262:141,121:141:4980:121:4336:-311.502,0,-369.487	0/1:235:69,166:69:2410:166:5894:-459.812,0,-146.413	0/0:428:427,1:427:15206:1:36:0,-125.243,-1364.67	0/1:176:70,106:70:2477:106:3780:-287.335,0,-170.202	0/0:180:180,0:180:6303:0:0:0,-54.1854,-567.376	0/1:468:223,245:223:7857:245:8782:-649.375,0,-566.284	0/1:369:178,191:178:6225:191:6835:-504.051,0,-449.284	0/0:17:17,0:17:600:0:0:0,-5.11751,-54.3292	0/0:365:365,0:365:12837:0:0:0,-109.876,-1155.18	0/0:204:204,0:204:7280:0:0:0,-61.4101,-655.25	0/1:227:100,127:100:3518:127:4548:-341.126,0,-248.498	0/0:30:30,0:30:1037:0:0:0,-9.0309,-93.637	0/0:65:64,1:64:2264:1:36:0,-15.9687,-200.425	0/1:7:6,1:6:208:1:36:-1.49107,0,-16.9519	0/0:31:31,0:31:1096:0:0:0,-9.33193,-98.9383	0/0:40:40,0:40:1412:0:0:0,-12.0412,-127.377	0/1:181:89,92:89:3164:92:3262:-239.308,0,-230.5	0/1:259:110,149:110:3873:149:5316:-400.37,0,-270.802	0/1:41:19,22:19:680:22:792:-59.2376,0,-49.1836	0/1:5:3,2:3:104:2:72:-5.33157,0,-8.19766	0/1:206:91,115:91:3189:115:4107:-307.787,0,-225.225	0/0:37:37,0:37:1304:0:0:0,-11.1381,-117.661	0/0:248:247,1:247:8742:1:36:0,-71.0572,-783.165	0/0:41:41,0:41:1460:0:0:0,-12.3422,-131.696	0/0:38:38,0:38:1336:0:0:0,-11.4391,-120.54	0/0:179:179,0:179:6294:0:0:0,-53.8844,-566.564	0/1:228:116,112:116:4083:112:4012:-292.606,0,-299.025	0/1:276:133,143:133:4668:143:5104:-375.959,0,-337.203	0/1:146:62,84:62:2169:84:2992:-225.519,0,-151.526	0/1:162:83,79:83:2916:79:2808:-204.182,0,-213.912	0/0:159:159,0:159:5567:0:0:0,-47.8638,-501.161	0/0:19:19,0:19:661:0:0:0,-5.71957,-59.8116	0/0:188:188,0:188:6552:0:0:0,-56.5936,-589.781	0/0:146:145,1:145:5130:1:36:0,-40.3521,-458.236	0/0:25:25,0:25:876:0:0:0,-7.52575,-79.157	0/0:221:220,1:220:7698:1:36:0,-62.9294,-689.27	0/0:75:75,0:75:2644:0:0:0,-22.5772,-238.209	0/0:15:15,0:15:516:0:0:0,-4.51545,-46.7662	0/1:54:32,22:32:1136:22:792:-55.3477,0,-86.2933	0/0:98:98,0:98:3469:0:0:0,-29.5009,-312.423	0/0:119:119,0:119:4244:0:0:0,-35.8226,-382.141	0/0:16:16,0:16:548:0:0:0,-4.81648,-49.6441	0/0:222:221,1:221:7708:1:36:0,-63.2304,-690.182	0/1:392:182,210:182:6473:210:7511:-557.881,0,-464.656	0/1:105:61,44:61:2176:44:1580:-110.865,0,-164.308	0/0:113:113,0:113:3910:0:0:0,-34.0164,-352.103	0/0:309:307,2:307:10812:2:72:0,-86.1815,-966.168	0/0:237:231,6:231:8143:6:216:0,-51.5536,-712.955	0/0:30:30,0:30:1064:0:0:0,-9.0309,-96.0708	0/0:82:82,0:82:2881:0:0:0,-24.6845,-259.528	0/1:69:25,44:25:900:44:1568:-120.637,0,-60.5499	0/1:36:22,14:22:764:14:500:-34.4991,0,-58.2424	0/1:265:151,114:151:5247:114:4054:-285.116,0,-392.611	0/1:154:63,91:63:2196:91:3268:-247.975,0,-151.279	0/0:500:499,1:499:17736:1:36:0,-146.917,-1592.13	0/1:226:117,109:117:4108:109:3905:-283.599,0,-301.878	0/1:150:77,73:77:2740:73:2616:-190.434,0,-201.619	0/1:125:50,75:50:1760:75:2685:-203.901,0,-121.055	0/0:44:44,0:44:1525:0:0:0,-13.2453,-137.54	0/0:137:137,0:137:4782:0:0:0,-41.2411,-430.545	0/1:120:62,58:62:2187:58:2084:-151.681,0,-160.964	0/1:280:138,142:138:4818:142:5084:-373.399,0,-349.493	0/1:95:33,62:33:1171:62:2220:-171.396,0,-77.0988	0/1:85:24,61:24:848:61:2169:-169.888,0,-51.0521	0/1:42:20,22:20:704:22:784:-58.1661,0,-51.0413	0/1:145:52,93:52:1856:93:3332:-256.443,0,-123.584	0/1:25:12,13:12:424:13:460:-34.2096,0,-30.9707	0/0:70:70,0:70:2424:0:0:0,-21.0721,-218.417	0/0:42:42,0:42:1476:0:0:0,-12.6433,-133.134	0/0:43:43,0:43:1524:0:0:0,-12.9443,-137.45	0/1:116:53,63:53:1841:63:2234:-166.382,0,-131.049	0/1:64:19,45:19:653:45:1616:-125.966,0,-39.8234	0/0:160:160,0:160:5562:0:0:0,-48.1648,-500.716	0/0:96:96,0:96:3420:0:0:0,-28.8989,-307.978
chr01	4029813	.	T	G	48777.8	PASS	AB=0.443029;ABP=45.0717;AC=145;AF=0.771277;AN=188;AO=2304;CIGAR=1X;DP=3148;DPB=3148;DPRA=6.75914;EPP=4893.8;EPPR=1783.99;GTI=2;LEN=1;MEANALT=1;MQM=59.6662;MQMR=59.2299;NS=94;NUMALT=1;ODDS=1.27023;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82255;QR=30225;RO=844;RPL=13;RPP=4893.8;RPPR=1783.99;RPR=2291;RUN=1;SAF=2304;SAP=5006.08;SAR=0;SRF=844;SRP=1835.73;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:18:0,18:0:0:18:648:-58.405,-5.41854,0	0/1:16:4,12:4:144:12:432:-34.4047,0,-8.49714	1/1:46:0,46:0:0:46:1638:-147.708,-13.8474,0	1/1:94:0,94:0:0:94:3348:-301.45,-28.2968,0	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	1/1:21:0,21:0:0:21:756:-68.3668,-6.32163,0	1/1:40:1,39:1:36:39:1393:-122.089,-8.46243,0	1/1:19:0,19:0:0:19:676:-61.1605,-5.71957,0	0/1:31:13,18:13:468:18:648:-49.2941,0,-33.1277	1/1:34:0,34:0:0:34:1220:-110.107,-10.235,0	1/1:12:0,12:0:0:12:417:-37.8611,-3.61236,0	1/1:90:0,90:0:0:90:3213:-289.072,-27.0927,0	0/1:38:23,15:23:807:15:536:-37.1357,0,-61.51	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	0/1:42:28,14:28:1008:14:500:-32.6929,0,-78.3916	1/1:35:1,34:1:36:34:1215:-106.063,-6.953,0	1/1:10:0,10:0:0:10:360:-32.7439,-3.0103,0	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:45:0,45:0:0:45:1596:-143.188,-13.5464,0	0/1:38:24,14:24:860:14:504:-34.258,0,-66.2827	0/1:51:33,18:33:1184:18:648:-43.2634,0,-91.5158	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	0/1:32:16,16:16:572:16:557:-40.8226,0,-42.1805	1/1:29:0,29:0:0:29:1044:-94.2524,-8.72987,0	0/1:58:35,23:35:1256:23:828:-57.3394,0,-95.8855	0/1:86:50,36:50:1792:36:1288:-90.335,0,-135.674	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:115:0,115:0:0:115:4122:-371.085,-34.6185,0	1/1:37:0,37:0:0:37:1304:-117.657,-11.1381,0	0/1:26:18,8:18:644:8:288:-18.4406,0,-50.4638	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:13:1,12:1:36:12:428:-35.2758,-0.33034,0	0/0:5:5,0:5:172:0:0:0,-1.50515,-11.915	0/1:30:3,27:3:108:27:955:-77.2334,0,-0.368779	1/1:18:1,17:1:36:17:608:-51.8059,-2.17238,0	0/1:86:56,30:56:2012:30:1072:-70.8681,0,-155.465	0/1:30:16,14:16:572:14:496:-35.9247,0,-42.7718	0/1:27:14,13:14:500:13:468:-34.3318,0,-37.172	0/1:14:3,11:3:108:11:392:-31.4056,0,-5.84654	0/1:31:16,15:16:572:15:540:-39.6046,0,-42.3503	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:41:0,41:0:0:41:1463:-131.951,-12.3422,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:23:0,23:0:0:23:824:-74.4772,-6.92369,0	1/1:45:0,45:0:0:45:1606:-144.794,-13.5464,0	0/1:36:27,9:27:972:9:324:-18.6688,0,-76.9527	0/1:40:24,16:24:843:16:572:-39.4001,0,-64.1468	0/1:32:22,10:22:779:10:360:-23.1113,0,-60.7968	0/1:23:7,16:7:252:16:560:-43.8045,0,-16.1053	1/1:53:0,53:0:0:53:1888:-170.196,-15.9546,0	0/1:31:3,28:3:104:28:1004:-81.3439,0,-0.0910797	1/1:39:1,38:1:36:38:1356:-118.725,-8.1419,0	1/1:26:0,26:0:0:26:929:-83.9256,-7.82678,0	1/1:19:0,19:0:0:19:684:-61.8775,-5.71957,0	1/1:34:0,34:0:0:34:1216:-109.745,-10.235,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:23:1,22:1:36:22:788:-67.2614,-3.34064,0	0/1:12:5,7:5:180:7:243:-18.5951,0,-10.5484	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:49:0,49:0:0:49:1760:-158.028,-14.7505,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:40:0,40:0:0:40:1428:-128.813,-12.0412,0	0/1:64:35,29:35:1248:29:1032:-73.9194,0,-93.3589	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	1/1:30:0,30:0:0:30:1076:-97.1391,-9.0309,0	1/1:45:1,44:1:36:44:1534:-137.157,-12.4476,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:36:0,36:0:0:36:1286:-116.033,-10.8371,0	0/1:34:18,16:18:648:16:559:-40.3654,0,-48.4169	0/1:21:12,9:12:432:9:324:-23.0971,0,-32.8996	0/1:118:72,46:72:2572:46:1643:-112.636,0,-194.484	0/1:32:12,20:12:432:20:703:-53.9602,0,-29.5882	1/1:22:1,21:1:36:21:756:-65.9937,-4.24913,0	0/1:66:28,38:28:1004:38:1352:-102.084,0,-70.6492	0/1:18:10,8:10:360:8:284:-20.4272,0,-27.3258	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	1/1:24:0,24:0:0:24:858:-77.5112,-7.22472,0	1/1:25:0,25:0:0:25:881:-79.6059,-7.52575,0	0/1:24:13,11:13:468:11:396:-28.722,0,-35.2349	0/1:63:40,23:40:1436:23:821:-55.2397,0,-110.136	0/1:29:15,14:15:536:14:504:-36.9667,0,-39.8449	0/1:24:14,10:14:504:10:340:-23.7032,0,-38.4734	0/1:14:11,3:11:396:3:108:-5.85729,0,-31.7665	0/1:50:37,13:37:1332:13:464:-27.046,0,-105.131	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	1/1:33:0,33:0:0:33:1184:-106.867,-9.93399,0	1/1:27:0,27:0:0:27:968:-87.4354,-8.12781,0	1/1:14:0,14:0:0:14:494:-44.7931,-4.21442,0	0/1:45:23,22:23:828:22:792:-58.0593,0,-61.284	0/1:26:19,7:19:680:7:252:-15.2022,0,-53.7024	1/1:52:0,52:0:0:52:1841:-165.699,-15.6536,0	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0
chr01	4071343	.	A	G	169440	PASS	AB=0.49498;ABP=4.1004;AC=146;AF=0.776596;AN=188;AO=7991;CIGAR=1X;DP=10528;DPB=10528;DPRA=22.6301;EPP=17355.2;EPPR=5492.49;GTI=2;LEN=1;MEANALT=1.08602;MQM=59.9807;MQMR=59.9786;NS=94;NUMALT=1;ODDS=0.6452;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=286085;QR=90202;RO=2528;RPL=0;RPP=17355.2;RPPR=5492.49;RPR=7991;RUN=1;SAF=7991;SAP=17355.2;SAR=0;SRF=2528;SRP=5492.49;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:119:0,119:0:0:119:4233:-381.151,-35.8226,0	0/1:76:39,37:39:1392:37:1324:-96.5805,0,-102.701	1/1:340:0,340:0:0:340:12185:-1096.49,-102.35,0	1/1:241:0,241:0:0:241:8617:-775.525,-72.5482,0	1/1:127:0,127:0:0:127:4556:-410.205,-38.2308,0	1/1:105:0,105:0:0:105:3737:-336.531,-31.6082,0	0/1:200:99,101:99:3548:101:3628:-266.518,0,-259.322	1/1:177:1,176:1:36:176:6282:-561.874,-49.684,0	0/1:216:113,103:113:4029:103:3650:-262.575,0,-297.776	1/1:159:0,159:0:0:159:5662:-509.671,-47.8638,0	1/1:57:0,57:0:0:57:2044:-184.232,-17.1587,0	1/1:82:0,81:0:0:81:2904:-261.236,-24.3834,0	0/1:96:43,53:43:1529:53:1896:-142.019,0,-109.002	1/1:53:0,53:0:0:53:1896:-170.918,-15.9546,0	0/1:104:50,54:50:1792:54:1936:-143.209,0,-130.255	1/1:67:0,67:0:0:67:2392:-215.537,-20.169,0	1/1:23:0,23:0:0:23:816:-73.7617,-6.92369,0	0/1:45:26,19:26:928:19:680:-47.9828,0,-70.291	1/1:36:0,36:0:0:36:1292:-116.583,-10.8371,0	1/1:294:0,293:0:0:293:10520:-946.35,-88.2018,0	0/1:203:63,140:63:2229:140:5004:-389.399,0,-139.764	0/1:102:66,36:66:2357:36:1292:-85.8787,0,-181.682	1/1:131:1,130:1:36:130:4645:-414.605,-35.8367,0	0/1:102:40,62:40:1432:62:2183:-166.026,0,-98.4725	1/1:142:1,141:1:36:141:5056:-451.586,-39.148,0	0/1:253:130,123:130:4630:123:4416:-321.45,0,-340.701	0/1:202:142,60:142:5074:60:2141:-132.148,0,-395.994	1/1:37:0,37:0:0:37:1332:-120.182,-11.1381,0	1/1:274:0,274:0:0:274:9840:-885.465,-82.4822,0	1/1:153:0,153:0:0:153:5476:-492.81,-46.0576,0	0/1:122:55,66:55:1976:66:2356:-175.515,0,-141.33	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:19:1,18:1:36:18:648:-55.0536,-2.1213,0	0/1:4:1,2:1:36:2:72:-5.5738,0,-2.33536	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	0/1:221:136,85:136:4876:85:3052:-208.378,0,-372.464	0/1:79:47,32:47:1657:32:1144:-79.4881,0,-125.634	0/1:41:25,16:25:885:16:576:-39.8328,0,-67.6243	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:180:84,96:84:3008:96:3437:-255.356,0,-216.766	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0	1/1:227:1,226:1:36:226:8065:-722.272,-64.7355,0	1/1:57:0,57:0:0:57:2044:-184.232,-17.1587,0	1/1:69:0,69:0:0:69:2480:-223.453,-20.7711,0	1/1:155:0,155:0:0:155:5552:-499.804,-46.6597,0	0/1:74:29,45:29:1036:45:1616:-123.454,0,-71.2777	0/1:154:67,87:67:2347:87:3124:-235.026,0,-165.127	0/1:148:78,70:78:2792:70:2516:-182.139,0,-206.968	0/1:130:61,69:61:2188:69:2480:-184.319,0,-158.052	1/1:202:0,202:0:0:202:7217:-649.584,-60.8081,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:100:0,100:0:0:100:3600:-324.201,-30.103,0	1/1:76:0,76:0:0:76:2709:-244.053,-22.8783,0	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	1/1:175:0,175:0:0:175:6268:-564.208,-52.6803,0	1/1:115:0,115:0:0:115:4113:-370.343,-34.6185,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:25:10,15:10:360:15:540:-41.4108,0,-25.2186	1/1:106:1,105:1:36:105:3749:-334.011,-28.3109,0	1/1:56:0,56:0:0:56:2012:-181.353,-16.8577,0	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:197:0,197:0:0:197:7038:-633.48,-59.3029,0	0/1:197:77,120:77:2756:120:4292:-327.155,0,-188.979	0/1:85:37,47:37:1328:47:1684:-126.201,0,-94.1759	1/1:115:1,114:1:36:114:4096:-365.226,-31.0202,0	1/1:220:3,217:3:108:217:7773:-689.523,-56.1514,0	1/1:95:4,91:4:140:91:3276:-282.114,-15.6533,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	0/1:40:25,15:25:900:15:521:-35.1751,0,-69.2798	0/1:17:10,7:10:360:7:240:-16.8172,0,-27.6268	0/1:133:68,63:68:2417:63:2249:-162.877,0,-177.5	0/1:94:52,42:52:1864:42:1504:-107.358,0,-139.739	1/1:199:0,199:0:0:199:7132:-641.937,-59.905,0	0/1:200:90,110:90:3213:110:3936:-294.226,0,-229.185	0/1:154:88,66:88:3136:66:2372:-167.379,0,-236.108	0/1:149:77,72:77:2737:72:2561:-185.886,0,-201.718	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:179:0,179:0:0:179:6432:-578.964,-53.8844,0	0/1:157:61,95:61:2176:95:3408:-259.613,0,-148.786	0/1:436:174,262:174:6187:262:9366:-711.653,0,-425.678	0/1:57:34,23:34:1205:23:828:-57.6854,0,-91.5952	0/1:67:45,22:45:1616:22:788:-51.0758,0,-125.561	0/1:63:42,21:42:1504:21:752:-49.0414,0,-116.584	0/1:172:96,76:96:3436:76:2720:-193.266,0,-257.676	0/1:32:23,9:23:820:9:320:-19.5094,0,-64.4896	1/1:58:0,58:0:0:58:2084:-187.83,-17.4597,0	1/1:70:0,70:0:0:70:2520:-227.051,-21.0721,0	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	0/1:41:16,25:16:568:25:900:-68.9788,0,-39.1096	0/1:109:90,19:90:3198:19:684:-29.0781,0,-255.229	1/1:78:0,78:0:0:78:2800:-252.24,-23.4803,0	1/1:134:0,133:0:0:133:4772:-429.276,-40.037,0
chr01	5735830	.	T	C	24731	PASS	AB=0.293604;ABP=2502.08;AC=40;AF=0.212766;AN=188;AO=1994;CIGAR=1X;DP=12635;DPB=12635;DPRA=1.54787;EPP=4332.93;EPPR=23101;GTI=7;LEN=1;MEANALT=1.04545;MQM=55.2247;MQMR=31.7382;NS=94;NUMALT=1;ODDS=0.97344;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71135;QR=381174;RO=10637;RPL=0;RPP=4332.93;RPPR=23101;RPR=1994;RUN=1;SAF=1994;SAP=4332.93;SAR=0;SRF=10637;SRP=23101;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:106:81,25:81:2900:25:896:-48.7823,0,-126.469	0/0:145:145,0:145:5189:0:0:0,-43.6493,-259.975	0/1:309:198,111:198:7101:111:3967:-262.91,0,-230.285	0/0:281:281,0:281:10043:0:0:0,-84.5894,-716.276	0/1:83:75,8:75:2673:8:288:-1.24467,0,-145.56	0/1:50:36,14:36:1288:14:500:-30.1601,0,-33.7266	0/0:137:137,0:137:4900:0:0:0,-41.2411,-317.149	0/1:193:127,66:127:4541:66:2364:-154.154,0,-145.135	0/0:159:159,0:159:5677:0:0:0,-47.8638,-311.226	0/0:69:69,0:69:2472:0:0:0,-20.7711,-173.694	0/0:32:32,0:32:1152:0:0:0,-9.63296,-84.89	0/0:107:107,0:107:3836:0:0:0,-32.2102,-216.52	0/0:74:74,0:74:2652:0:0:0,-22.2762,-157.733	0/0:62:62,0:62:2228:0:0:0,-18.6639,-130.844	0/0:81:81,0:81:2907:0:0:0,-24.3834,-196.299	0/0:68:68,0:68:2440:0:0:0,-20.47,-141.728	0/0:35:35,0:35:1260:0:0:0,-10.536,-74.9072	0/0:32:32,0:32:1148:0:0:0,-9.63296,-63.9312	0/0:22:22,0:22:792:0:0:0,-6.62266,-44.3506	0/1:270:185,85:185:6609:85:3025:-190.803,0,-324.501	0/1:253:161,92:161:5780:92:3281:-218.359,0,-276.262	0/1:236:154,82:154:5521:82:2940:-193.155,0,-270.459	0/0:200:198,2:198:7112:2:72:0,-53.3742,-463.32	0/0:107:100,7:100:3577:7:252:0,-9.46749,-184.481	0/0:98:98,0:98:3520:0:0:0,-29.5009,-230.022	0/1:473:314,159:314:11276:159:5688:-367.999,0,-562.039	0/0:275:275,0:275:9837:0:0:0,-82.7832,-635.6	0/0:35:35,0:35:1260:0:0:0,-10.536,-90.5396	0/1:408:262,146:262:9412:146:5186:-343.515,0,-499.399	0/1:241:173,68:173:6178:68:2409:-142.793,0,-304.387	0/0:131:131,0:131:4708:0:0:0,-39.4349,-333.311	0/1:16:13,3:13:456:3:97:-4.21153,0,-28.3408	0/1:30:11,19:11:392:19:684:-52.1272,0,-15.4379	0/0:8:8,0:8:288:0:0:0,-2.40824,-19.408	0/1:14:10,4:10:360:4:144:-9.08548,0,-12.5977	0/1:15:7,8:7:252:8:288:-21.7249,0,-9.36218	0/1:295:225,70:225:8080:70:2465:-133.163,0,-427.644	0/1:322:241,81:241:8656:81:2892:-161.528,0,-406.243	0/0:38:38,0:38:1364:0:0:0,-11.4391,-68.9476	0/0:6:6,0:6:216:0:0:0,-1.80618,-10.8763	0/0:120:120,0:120:4270:0:0:0,-36.1236,-294.166	0/0:25:25,0:25:892:0:0:0,-7.52575,-56.9389	0/0:157:157,0:157:5617:0:0:0,-47.2617,-419.353	0/0:45:45,0:45:1616:0:0:0,-13.5463,-113.959	0/1:60:44,16:44:1563:16:576:-33.9798,0,-78.8856	0/1:216:147,69:147:5230:69:2480:-158.118,0,-255.946	0/0:175:175,0:175:6292:0:0:0,-52.6802,-396.95	0/0:247:247,0:247:8846:0:0:0,-74.3544,-593.744	0/0:159:159,0:159:5654:0:0:0,-47.8638,-366.573	0/0:143:143,0:143:5121:0:0:0,-43.0473,-360.183	0/1:306:246,60:246:8824:60:2148:-101.306,0,-456.709	0/0:8:8,0:8:288:0:0:0,-2.40824,-23.3169	0/0:161:161,0:161:5788:0:0:0,-48.4658,-334.311	0/0:89:89,0:89:3200:0:0:0,-26.7917,-229.396	0/1:6:5,1:5:176:1:36:-1.78839,0,-3.24626	0/0:167:167,0:167:5988:0:0:0,-50.272,-407.046	0/0:94:94,0:94:3353:0:0:0,-28.2968,-210.407	0/1:7:5,2:5:180:2:72:-4.7276,0,-11.8382	0/1:17:9,8:9:324:8:288:-21.1411,0,-17.938	0/0:104:104,0:104:3736:0:0:0,-31.3071,-240.602	0/1:163:140,22:140:5012:22:792:-22.4074,0,-263.941	0/0:4:4,0:4:144:0:0:0,-1.20412,-10.3323	0/0:230:230,0:230:8225:0:0:0,-69.2369,-581.872	0/1:391:278,113:278:9972:113:4017:-243.547,0,-496.769	0/0:63:62,1:62:2220:1:36:0,-15.5104,-140.191	0/1:173:113,60:113:4048:60:2115:-138.317,0,-202.464	0/1:257:168,88:168:5986:88:3156:-206.64,0,-302.051	0/1:361:204,157:204:7328:157:5574:-392.661,0,-320.798	0/1:12:8,4:8:288:4:144:-9.68238,0,-12.7634	0/1:109:78,31:78:2792:31:1108:-67.0939,0,-70.6866	0/1:98:69,29:69:2476:29:1040:-64.376,0,-114.484	0/0:23:23,0:23:824:0:0:0,-6.92369,-54.3498	0/1:293:236,57:236:8446:57:2024:-91.373,0,-218.515	0/1:130:89,41:89:3200:41:1468:-92.0087,0,-86.9407	0/1:182:135,47:135:4836:47:1684:-96.85,0,-244.295	0/0:215:215,0:215:7720:0:0:0,-64.7214,-514.951	0/1:214:191,23:191:6833:23:828:-9.41317,0,-239.473	0/1:136:94,42:94:3376:42:1508:-94.689,0,-94.4621	0/1:15:10,5:10:356:5:180:-12.0147,0,-9.66444	0/0:115:115,0:115:4132:0:0:0,-34.6184,-270.789	0/0:162:161,1:161:5788:1:36:0,-45.1723,-342.551	0/0:339:338,0:338:12132:0:0:0,-101.748,-850.106	0/0:126:126,0:126:4510:0:0:0,-37.9298,-320.153	0/0:74:74,0:74:2656:0:0:0,-22.2762,-181.283	0/0:42:42,0:42:1512:0:0:0,-12.6433,-109.501	0/0:128:128,0:128:4604:0:0:0,-38.5318,-313.691	0/0:39:39,0:39:1383:0:0:0,-11.7402,-76.5018	0/1:89:66,23:66:2376:23:811:-46.3452,0,-84.286	0/0:86:86,0:86:3092:0:0:0,-25.8886,-194.672	0/0:17:17,0:17:612:0:0:0,-5.11751,-35.9952	0/1:97:80,17:80:2863:17:612:-26.0139,0,-116.127	0/1:108:81,27:81:2912:27:964:-54.3835,0,-123.387	0/0:236:235,0:235:8421:0:0:0,-70.742,-583.022	0/0:86:86,0:86:3088:0:0:0,-25.8886,-193.306
chr01	5735835	.	GTTTGAAC	GTTCGAAT,ATTCGAAT	149111	PASS	AB=0.467536,0.527158;ABP=120.315,85.0999;AC=95,93;AF=0.505319,0.494681;AN=188;AO=6003,6760;CIGAR=3M1X3M1X,1X2M1X3M1X;DP=12831;DPB=12832.5;DPRA=0,0;EPP=13038.4,14682.2;EPPR=0;GTI=10;LEN=8,8;MEANALT=2.68085,2.68085;MQM=55.0631,17.9533;MQMR=0;NS=94;NUMALT=2;ODDS=2810.28;PAIRED=0,0;PAIREDR=0;PAO=2.5,2.5;PQA=68.5,68.5;PQR=0;PRO=0;QA=212828,239574;QR=0;RO=0;RPL=0,0;RPP=13038.4,14682.2;RPPR=0;RPR=6003,6760;RUN=1,1;SAF=6003,6760;SAP=13038.4,14682.2;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:109:0,60,48:0:0:60,48:2115,1697:-206.873,-34.8166,-16.7548,-172.008,0,-157.559	1/2:145:0,52,92:0:0:52,92:1834,3260:-213.485,-64.3961,-48.7425,-149.25,0,-121.555	1/2:315:0,170,144:0:0:170,144:6016,5086:-588.569,-99.8115,-48.6364,-488.64,0,-445.291	1/2:284:0,152,132:0:0:152,132:5357,4685:-631.832,-196.361,-150.605,-435.74,0,-396.004	1/2:87:0,40,45:0:0:40,45:1416,1596:-173.28,-58.2342,-46.193,-114.967,0,-101.421	1/2:50:0,20,30:0:0:20,30:703,1065:-77.7992,-20.5913,-14.5707,-57.4058,0,-48.3749	1/2:139:0,51,88:0:0:51,88:1815,3108:-277.969,-130.114,-114.761,-148.152,0,-121.662	1/2:196:0,103,92:0:0:103,92:3652,3265:-359.27,-62.6299,-31.6238,-296.569,0,-268.874	1/2:159:0,66,92:0:0:66,92:2322,3259:-257.621,-68.7652,-48.8972,-188.771,0,-161.077	1/2:71:0,35,35:0:0:35,35:1248,1252:-154.882,-53.4061,-42.8701,-101.486,0,-90.9496	1/2:38:0,19,18:0:0:19,18:676,637:-81.6903,-26.6304,-20.9108,-54.9903,0,-49.5717	1/2:110:0,50,59:0:0:50,59:1783,2112:-186.499,-41.471,-26.4195,-144.992,0,-127.232	1/2:74:0,38,36:0:0:38,36:1343,1282:-133.927,-24.7766,-13.3375,-109.378,0,-98.5412	1/2:62:0,20,42:0:0:20,42:704,1495:-111.072,-54.0364,-48.0158,-57.3293,0,-44.6861	1/2:82:0,35,46:0:0:35,46:1253,1642:-170.341,-68.2316,-57.6955,-102.05,0,-88.2026	1/2:67:0,19,48:0:0:19,48:680,1713:-117.969,-62.5439,-56.8244,-55.7311,0,-41.2816	1/2:35:0,16,18:0:0:16,18:573,635:-61.0106,-14.2302,-9.41376,-46.6958,0,-41.2773	1/2:32:0,14,18:0:0:14,18:494,646:-53.7605,-13.4723,-9.25787,-40.5372,0,-35.1186	1/2:23:0,10,13:0:0:10,13:359,456:-38.3158,-8.95555,-5.94525,-29.6103,0,-25.6969	1/2:275:0,140,133:0:0:140,133:4969,4718:-603.607,-199.6,-157.455,-403.932,0,-363.895	1/2:260:0,150,108:0:0:150,108:5298,3832:-572.651,-142.443,-97.2884,-430.135,0,-397.624	1/2:240:0,113,123:0:0:113,123:4028,4376:-530.199,-202.282,-168.266,-327.882,0,-290.855	1/2:204:0,82,122:0:0:82,122:2916,4308:-421.212,-183.868,-159.183,-237.638,0,-200.912	1/2:112:0,35,75:0:0:35,75:1239,2657:-197.988,-97.4192,-86.8831,-100.52,0,-77.9432	1/2:99:0,45,54:0:0:45,54:1584,1904:-198.917,-70.2778,-56.7314,-128.911,0,-112.655	1/2:482:0,236,245:0:0:236,245:8347,8700:-1083.68,-405.514,-334.471,-678.183,0,-604.43	1/2:278:0,120,157:0:0:120,157:4268,5561:-549.436,-202.419,-166.295,-346.975,0,-299.713	1/2:35:0,20,15:0:0:20,15:713,533:-79.297,-21.2948,-15.2742,-58.2629,0,-53.7474	1/2:412:0,233,177:0:0:233,177:8270,6302:-966.436,-293.141,-223.001,-673.324,0,-620.042	1/2:242:0,130,112:0:0:130,112:4588,3965:-518.898,-147.38,-108.246,-371.778,0,-338.062	1/2:133:0,69,64:0:0:69,64:2438,2274:-293.386,-95.0754,-74.3043,-198.583,0,-179.317	1/2:16:0,11,5:0:0:11,5:394,180:-38.829,-6.74393,-3.4326,-32.3197,0,-30.8145	1/2:30:0,23,7:0:0:23,7:820,246:-75.6217,-9.3575,-2.43381,-66.4839,0,-64.3767	1/2:8:0,5,3:0:0:5,3:180,107:-16.9995,-2.17307,-0.667921,-15.0299,0,-14.1268	1/2:14:0,7,7:0:0:7,7:246,252:-25.0482,-4.92471,-2.8175,-20.3539,0,-18.2467	1/1:17:0,12,5:0:0:12,5:428,176:-38.6386,-3.61236,0,-35.2733,-0.06477,-33.7682	1/2:300:0,130,168:0:0:130,168:4618,5998:-654.677,-278.54,-239.406,-376.082,0,-325.509	1/2:328:0,151,174:0:0:151,174:5353,6180:-662.237,-228.14,-182.684,-434.038,0,-381.659	1/2:38:0,13,25:0:0:13,25:463,884:-57.0547,-19.2773,-15.3639,-38.052,0,-30.5263	1/2:6:0,1,5:0:0:1,5:33,173:-8.78302,-6.08972,-5.78869,-2.99554,0,-1.49039	1/2:121:0,65,56:0:0:65,56:2306,1987:-261.291,-73.813,-54.246,-187.738,0,-170.881	1/2:26:0,12,14:0:0:12,14:421,494:-52.3468,-18.539,-14.9266,-34.0767,0,-29.8623	1/2:160:0,105,53:0:0:105,53:3702,1867:-369.311,-68.4838,-36.8756,-300.776,0,-284.822	1/2:45:0,22,23:0:0:22,23:774,820:-98.5508,-35.6028,-28.9801,-63.2274,0,-56.3037	1/2:65:0,31,34:0:0:31,34:1076,1161:-137.406,-49.9595,-40.6276,-87.7213,0,-77.4863	1/2:221:0,101,120:0:0:101,120:3572,4249:-488.15,-197.42,-167.016,-291.02,0,-254.897	1/2:178:0,100,77:0:0:100,77:3571,2736:-345.189,-54.7363,-24.6333,-290.376,0,-267.197	1/2:249:0,107,141:0:0:107,141:3801,4964:-517.48,-208.357,-176.147,-309.1,0,-266.655	1/2:161:0,60,101:0:0:60,101:2127,3571:-324.159,-150.952,-132.891,-173.503,0,-143.099	1/2:144:0,73,70:0:0:73,70:2610,2486:-316.943,-104.38,-82.4049,-212.648,0,-191.576	1/2:313:0,113,197:0:0:113,197:4031,6991:-653.849,-325.442,-291.426,-328.37,0,-269.067	1/2:8:0,6,2:0:0:6,2:211,72:-20.4551,-3.17767,-1.37149,-17.5144,0,-16.9124	1/2:165:0,80,84:0:0:80,84:2833,2987:-286.824,-57.1211,-33.0387,-229.632,0,-204.345	1/2:92:0,44,48:0:0:44,48:1561,1687:-206.621,-79.5137,-66.2684,-127.396,0,-112.946	1/2:6:0,1,5:0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chr01	5735871	.	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chr01	6365272	.	G	T	24293.1	PASS	AB=0.436967;ABP=120.448;AC=35;AF=0.18617;AN=188;AO=1497;CIGAR=1X;DP=8280;DPB=8280;DPRA=1.17147;EPP=440.207;EPPR=234.92;GTI=0;LEN=1;MEANALT=1.05263;MQM=32.7856;MQMR=43.7579;NS=94;NUMALT=1;ODDS=6.81624;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=52858;QR=232939;RO=6781;RPL=0;RPP=3253.7;RPPR=14727.8;RPR=1497;RUN=1;SAF=1023;SAP=440.207;SAR=474;SRF=3816;SRP=234.92;SRR=2965;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:68:68,0:68:2380:0:0:0,-20.47,-207.57	0/1:71:37,34:37:1275:34:1203:-68.0974,0,-89.7242	0/0:150:150,0:150:5118:0:0:0,-45.1545,-446.613	0/0:157:157,0:157:5413:0:0:0,-47.2617,-477.123	0/0:61:61,0:61:2099:0:0:0,-18.3628,-185.125	0/0:55:55,0:55:1891:0:0:0,-16.5566,-166.421	0/1:82:37,45:37:1306:45:1584:-98.0649,0,-90.7672	0/0:155:155,0:155:5339:0:0:0,-46.6596,-468.405	0/0:116:116,0:116:4013:0:0:0,-34.9195,-349.951	0/0:48:48,0:48:1617:0:0:0,-14.4494,-143.09	0/0:87:87,0:87:3033:0:0:0,-26.1896,-267.801	0/0:146:146,0:146:4936:0:0:0,-43.9504,-432.452	0/1:132:81,51:81:2808:51:1815:-85.9845,0,-204.747	0/0:114:114,0:114:3911:0:0:0,-34.3174,-344.118	0/1:117:65,51:65:2239:51:1803:-105.438,0,-163.789	0/0:150:150,0:150:5243:0:0:0,-45.1545,-461.542	0/0:93:93,0:93:3210:0:0:0,-27.9958,-279.257	0/1:68:49,19:49:1637:19:676:-28.1536,0,-123.536	0/1:58:37,21:37:1284:21:756:-36.9879,0,-94.945	0/1:85:45,40:45:1544:40:1416:-84.7059,0,-110.147	0/1:117:74,43:74:2553:43:1535:-78.7736,0,-190.653	0/1:27:10,17:10:330:17:612:-41.1438,0,-21.6544	0/0:80:80,0:80:2735:0:0:0,-24.0824,-242.063	0/0:78:70,8:70:2383:8:284:0,-1.31859,-186.499	0/0:58:58,0:58:2015:0:0:0,-17.4597,-176.423	0/1:152:85,67:85:2920:67:2326:-143.817,0,-213.738	0/0:122:122,0:122:4231:0:0:0,-36.7257,-373.614	0/0:54:54,0:54:1867:0:0:0,-16.2556,-164.355	0/1:159:90,69:90:3087:69:2438:-147.853,0,-225.483	0/0:66:65,1:65:2257:1:36:0,-16.9652,-194.763	0/0:96:96,0:96:3357:0:0:0,-28.8989,-297.718	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.4991	0/0:29:29,0:29:1036:0:0:0,-8.72987,-90.6376	0/1:10:4,6:4:144:6:212:-13.9356,0,-9.86827	0/0:13:13,0:13:468:0:0:0,-3.91339,-40.7646	0/0:19:19,0:19:655:0:0:0,-5.71957,-58.081	0/1:294:163,131:163:5545:131:4633:-283.443,0,-405.281	0/0:55:55,0:55:1923:0:0:0,-16.5566,-169.556	0/1:83:54,29:54:1871:29:1018:-46.7975,0,-139.003	0/1:4:1,3:1:36:3:108:-6.92362,0,-2.31689	0/1:83:49,34:49:1661:34:1197:-67.4411,0,-121.202	0/0:82:82,0:82:2868:0:0:0,-24.6845,-252.218	0/0:120:120,0:120:4069:0:0:0,-36.1236,-356.706	0/0:122:122,0:122:4086:0:0:0,-36.7257,-361.798	0/0:111:111,0:111:3757:0:0:0,-33.4143,-331.846	0/0:53:53,0:53:1876:0:0:0,-15.9546,-166.484	0/0:73:73,0:73:2523:0:0:0,-21.9752,-217.573	0/1:99:45,53:45:1531:53:1873:-117.731,0,-106.022	0/1:56:33,23:33:1145:23:816:-47.6614,0,-84.4903	0/1:117:73,44:73:2458:44:1551:-86.2621,0,-183.014	0/1:76:42,34:42:1428:34:1204:-74.3146,0,-104.85	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.4344	0/0:102:102,0:102:3492:0:0:0,-30.7051,-308.055	0/0:35:35,0:35:1205:0:0:0,-10.536,-106.386	0/0:10:10,0:10:356:0:0:0,-3.0103,-30.0337	0/0:151:151,0:151:5268:0:0:0,-45.4555,-461.851	0/0:34:34,0:34:1196:0:0:0,-10.235,-105.947	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.2083	0/1:14:10,4:10:356:4:125:-6.31692,0,-27.5787	0/0:64:64,0:64:2188:0:0:0,-19.2659,-193.404	0/0:120:119,1:119:4047:1:36:0,-32.7775,-354.484	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.0955	0/0:91:91,0:91:3083:0:0:0,-27.3937,-274.328	0/1:130:84,46:84:2870:46:1607:-88.9759,0,-213.962	0/0:54:54,0:54:1890:0:0:0,-16.2556,-165.887	0/0:69:69,0:69:2393:0:0:0,-20.7711,-211.671	0/0:119:119,0:119:4042:0:0:0,-35.8226,-355.193	0/0:90:90,0:90:3202:0:0:0,-27.0927,-283.637	0/0:74:74,0:74:2620:0:0:0,-22.2762,-230.602	0/0:67:67,0:67:2329:0:0:0,-20.169,-204.27	0/0:138:138,0:138:4801:0:0:0,-41.5421,-426.6	0/0:11:11,0:11:377:0:0:0,-3.31133,-33.7698	0/1:65:32,33:32:1116:33:1180:-66.0151,0,-77.5122	0/1:73:48,25:48:1673:25:887:-40.9728,0,-124.885	0/1:119:71,48:71:2444:48:1715:-92.2121,0,-180.037	0/0:117:117,0:117:4006:0:0:0,-35.2205,-354.959	0/1:111:62,49:62:2115:49:1732:-89.1538,0,-150.682	0/0:99:99,0:99:3419:0:0:0,-29.802,-301.82	0/0:12:12,0:12:423:0:0:0,-3.61236,-37.5753	0/1:92:55,37:55:1823:37:1323:-72.8094,0,-134.255	0/1:83:50,33:50:1750:33:1172:-62.8276,0,-127.439	0/1:150:60,90:60:2086:90:3175:-203.787,0,-139.608	0/1:115:57,58:57:1949:58:2013:-124.716,0,-138.354	0/1:124:66,58:66:2239:58:2031:-120.601,0,-160.557	0/0:108:108,0:108:3556:0:0:0,-32.5112,-314.882	0/1:185:112,73:112:3760:73:2572:-149.214,0,-277.254	0/1:33:20,13:20:651:13:468:-24.5927,0,-47.8026	0/0:111:111,0:111:3809:0:0:0,-33.4143,-332.445	0/0:120:120,0:120:4036:0:0:0,-36.1236,-352.714	0/0:104:104,0:104:3561:0:0:0,-31.3071,-314.123	0/1:125:70,55:70:2362:55:1941:-107.257,0,-171.512	0/1:94:43,51:43:1466:51:1785:-114.357,0,-101.65	0/0:107:107,0:107:3668:0:0:0,-32.2102,-325.999	0/0:210:210,0:210:7165:0:0:0,-63.2163,-633.758
chr01	6657417	.	A	T	155660	PASS	AB=0.473428;ABP=19.3971;AC=153;AF=0.81383;AN=188;AO=5927;CIGAR=1X;DP=7368;DPB=7368;DPRA=0;EPP=7079.81;EPPR=1607.03;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9889;MQMR=59.9569;NS=94;NUMALT=1;ODDS=2.18695;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=211927;QR=51475;RO=1439;RPL=1103;RPP=5075.71;RPPR=918.742;RPR=4824;RUN=1;SAF=5590;SAP=10112.6;SAR=337;SRF=1313;SRP=2129.17;SRR=126;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	0/1:31:19,12:19:684:12:419:-28.7107,0,-52.5584	1/1:54:1,53:1:36:53:1881:-165.968,-12.6573,0	1/1:49:0,49:0:0:49:1760:-158.684,-14.7505,0	1/1:19:1,18:1:36:18:644:-54.6923,-2.1213,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:37:24,13:24:856:13:460:-30.5973,0,-66.223	1/1:38:0,38:0:0:38:1356:-122.34,-11.4391,0	1/1:57:0,57:0:0:57:2036:-183.512,-17.1587,0	1/1:20:0,20:0:0:20:697:-63.0507,-6.0206,0	1/1:202:0,201:0:0:201:7200:-647.734,-60.507,0	1/1:95:1,94:1:36:94:3356:-298.659,-24.9996,0	0/1:104:66,38:66:2368:38:1368:-92.1091,0,-182.071	1/1:72:0,72:0:0:72:2572:-231.73,-21.6742,0	0/1:68:34,34:34:1224:34:1224:-89.997,0,-89.997	1/1:65:0,65:0:0:65:2340:-210.859,-19.567,0	1/1:47:2,45:2:72:45:1599:-137.333,-7.31169,0	0/1:47:26,21:26:936:21:756:-54.2188,0,-70.4111	0/1:171:84,87:84:3012:87:3132:-230.629,0,-219.835	0/1:19:5,14:5:180:14:500:-39.6166,0,-10.8325	0/1:40:25,15:25:892:15:536:-36.5336,0,-68.5585	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:32:0,31:0:0:31:1112:-100.032,-9.33193,0	0/1:22:3,19:3:104:19:684:-55.2677,0,-3.08015	1/1:37:0,37:0:0:37:1320:-119.102,-11.1381,0	0/1:37:23,14:23:809:14:500:-34.1981,0,-61.9902	1/1:108:0,108:0:0:108:3836:-345.439,-32.5112,0	1/1:44:0,44:0:0:44:1568:-141.412,-13.2453,0	0/1:45:21,24:21:756:24:849:-63.1815,0,-54.8209	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	1/1:27:0,27:0:0:27:964:-87.0197,-8.12781,0	1/1:161:1,160:1:36:160:5748:-513.835,-44.8676,0	1/1:171:1,170:1:36:170:6088:-544.423,-47.8779,0	0/1:264:137,127:137:4901:127:4556:-330.733,0,-361.74	1/1:333:0,333:0:0:333:11916:-1072.29,-100.243,0	1/1:233:1,232:1:36:232:8312:-744.489,-66.5417,0	0/1:137:64,73:64:2285:73:2603:-193.277,0,-164.669	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:232:130,102:130:4647:102:3652:-259.045,0,-348.553	0/1:144:73,71:73:2612:71:2540:-185.503,0,-191.98	0/1:26:16,10:16:576:10:352:-24.1914,0,-44.3482	1/1:83:1,82:1:36:82:2936:-260.876,-21.3872,0	1/1:49:1,48:1:36:48:1712:-150.767,-11.1522,0	1/1:49:0,49:0:0:49:1748:-157.604,-14.7505,0	1/1:60:0,60:0:0:60:2156:-194.307,-18.0618,0	1/1:19:0,19:0:0:19:671:-60.7158,-5.71957,0	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	0/1:51:22,29:22:788:29:1044:-78.9223,0,-55.8923	0/1:24:9,15:9:316:15:532:-40.9884,0,-21.5541	0/1:16:5,11:5:180:11:392:-30.8036,0,-11.7356	0/1:31:12,19:12:432:19:680:-52.1972,0,-29.8893	1/1:144:3,141:3:108:141:5025:-442.322,-33.2732,0	1/1:33:0,33:0:0:33:1180:-106.508,-9.93399,0	1/1:17:1,16:1:36:16:576:-48.5767,-1.51924,0	1/1:61:0,61:0:0:61:2196:-197.905,-18.3628,0	1/1:49:0,49:0:0:49:1760:-158.684,-14.7505,0	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	1/1:153:0,153:0:0:153:5480:-493.326,-46.0576,0	0/1:127:76,51:76:2712:51:1832:-126.93,0,-206.093	1/1:18:0,18:0:0:18:636:-57.568,-5.41854,0	1/1:51:1,50:1:36:50:1783:-157.154,-11.7543,0	1/1:121:0,121:0:0:121:4340:-390.774,-36.4246,0	1/1:117:0,117:0:0:117:4168:-375.302,-35.2205,0	0/1:41:20,21:20:716:21:748:-55.3031,0,-52.4255	1/1:25:0,25:0:0:25:892:-80.5997,-7.52575,0	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	1/1:54:1,53:1:36:53:1896:-167.32,-12.6573,0	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	1/1:221:4,217:4:144:217:7784:-687.275,-53.214,0	1/1:35:0,35:0:0:35:1248:-112.625,-10.5361,0	1/1:63:3,60:3:108:60:2143:-183.062,-8.88972,0	1/1:119:2,117:2:72:117:4141:-366.04,-28.9858,0	0/1:28:9,19:9:320:19:680:-53.1003,0,-20.7135	0/1:45:21,24:21:752:24:852:-63.454,0,-54.4599	1/1:58:1,57:1:36:57:2036:-179.914,-13.8615,0	1/1:37:0,37:0:0:37:1320:-119.102,-11.1381,0	0/1:37:20,17:20:720:17:612:-44.2753,0,-53.9907	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:294:0,294:0:0:294:10524:-947.074,-88.5028,0	0/1:22:8,14:8:288:14:504:-39.0754,0,-19.6447	0/1:28:11,17:11:381:17:612:-46.9846,0,-26.1836	0/1:68:18,50:18:640:50:1796:-141.452,0,-37.4593	0/1:53:27,26:27:968:26:905:-65.8082,0,-71.4828	0/1:83:45,38:45:1607:38:1364:-98.0752,0,-119.934	1/1:57:0,57:0:0:57:2048:-184.591,-17.1587,0	0/1:111:55,56:55:1944:56:2004:-147.219,0,-141.629	0/1:19:9,10:9:324:10:360:-27.0247,0,-23.7863	1/1:60:2,58:2:72:58:2068:-179.554,-11.2251,0	1/1:72:2,70:2:72:70:2501:-218.504,-14.8374,0	1/1:280:2,278:2:72:278:9948:-888.422,-77.4517,0	0/1:406:251,155:251:8993:155:5536:-376.148,0,-687.128	0/1:53:36,17:36:1292:17:608:-39.0974,0,-100.629	1/1:114:0,114:0:0:114:4051:-364.777,-34.3174,0	1/1:100:0,100:0:0:100:3555:-320.16,-30.103,0
chr01	7052343	.	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chr01	7332313	.	T	C	49021.7	PASS	AB=0.516382;ABP=15.8162;AC=36;AF=0.191489;AN=188;AO=2874;CIGAR=1X;DP=12679;DPB=12679;DPRA=1.34647;EPP=6165.89;EPPR=20681.9;GTI=4;LEN=1;MEANALT=1.06667;MQM=59.7571;MQMR=59.9714;NS=94;NUMALT=1;ODDS=0.588142;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102728;QR=351352;RO=9801;RPL=2865;RPP=6165.89;RPPR=20673.4;RPR=9;RUN=1;SAF=0;SAP=6243.82;SAR=2874;SRF=1;SRP=21276.9;SRR=9800;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:136:67,69:67:2404:69:2480:-182.513,0,-175.676	0/0:101:101,0:101:3621:0:0:0,-30.404,-326.093	0/0:285:285,0:285:10240:0:0:0,-85.7935,-921.362	0/0:63:62,1:62:2228:1:21:0,-16.8649,-198.684	0/0:78:78,0:78:2804:0:0:0,-23.4803,-252.493	0/1:154:78,76:78:2804:76:2712:-197.962,0,-206.241	0/0:232:232,0:232:8337:0:0:0,-69.839,-750.33	0/0:101:101,0:101:3612:0:0:0,-30.404,-325.286	0/0:154:154,0:154:5513:0:0:0,-46.3586,-496.29	0/0:144:144,0:144:5165:0:0:0,-43.3483,-464.987	0/0:124:124,0:124:4464:0:0:0,-37.3277,-401.927	0/1:108:63,45:63:2268:45:1612:-112.858,0,-171.871	0/0:179:178,1:178:6389:1:36:0,-50.2861,-571.494	0/1:72:34,38:34:1209:38:1364:-101.385,0,-87.44	0/0:107:107,0:107:3848:0:0:0,-32.2102,-346.514	0/0:150:150,0:150:5396:0:0:0,-45.1545,-485.763	0/1:101:45,56:45:1616:56:2016:-151.309,0,-115.326	0/1:52:35,17:35:1256:17:612:-39.7599,0,-97.6917	0/1:176:77,99:77:2753:99:3520:-263.131,0,-195.028	0/1:163:66,97:66:2376:97:3480:-264.343,0,-165.029	0/1:139:52,87:52:1868:87:3124:-239.536,0,-126.556	0/0:139:137,2:137:4913:2:72:0,-35.015,-435.445	0/0:215:196,19:196:7014:19:684:0,-2.83112,-569.429	0/0:96:96,0:96:3456:0:0:0,-28.8989,-311.251	0/1:545:270,274:270:9659:274:9740:-712.411,0,-705.131	0/0:233:233,0:233:8312:0:0:0,-70.14,-748.084	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.236	0/1:293:135,158:135:4811:158:5642:-419.692,0,-344.932	0/0:249:249,0:249:8925:0:0:0,-74.9565,-803.228	0/0:251:250,1:250:8913:1:36:0,-71.9603,-798.323	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6906	0/1:9:4,5:4:140:5:180:-13.8428,0,-10.2353	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:15:14,1:14:500:1:36:0,-0.917175,-41.7379	0/1:326:147,179:147:5288:179:6421:-479.826,0,-377.916	0/0:383:383,0:383:13685:0:0:0,-115.294,-1231.39	0/1:117:58,59:58:2084:59:2112:-155.092,0,-152.61	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:174:78,95:78:2800:95:3370:-251.011,0,-199.836	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/0:128:127,1:127:4541:1:36:0,-34.9336,-405.257	0/0:138:138,0:138:4941:0:0:0,-41.5421,-444.838	0/0:102:102,0:102:3653:0:0:0,-30.7051,-328.972	0/0:123:123,0:123:4379:0:0:0,-37.0267,-394.279	0/0:62:62,0:62:2232:0:0:0,-18.6639,-201.144	0/1:211:101,110:101:3628:110:3952:-292.348,0,-262.835	0/1:71:27,44:27:972:44:1554:-118.776,0,-66.4248	0/1:221:118,103:118:4236:103:3689:-265.672,0,-314.891	0/1:248:121,127:121:4356:127:4506:-329.825,0,-317.399	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:152:152,0:152:5453:0:0:0,-45.7566,-490.895	0/0:71:71,0:71:2536:0:0:0,-21.3731,-228.49	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:66:66,0:66:2353:0:0:0,-19.868,-212.027	0/0:67:67,0:67:2382:0:0:0,-20.169,-214.634	0/0:29:29,0:29:1029:0:0:0,-8.72987,-92.9211	0/1:44:24,20:24:864:20:720:-51.8825,0,-64.8372	0/0:132:132,0:132:4691:0:0:0,-39.736,-422.349	0/0:235:234,1:234:8424:1:36:0,-67.1442,-754.548	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:279:279,0:279:10013:0:0:0,-83.9874,-901.101	0/1:209:116,93:116:4157:93:3302:-234.454,0,-311.395	0/0:79:79,0:79:2844:0:0:0,-23.7814,-256.197	0/0:98:98,0:98:3509:0:0:0,-29.5009,-316.018	0/0:251:251,0:251:9001:0:0:0,-75.5585,-810.064	0/0:118:116,2:116:4130:2:68:0,-29.0638,-365.396	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/0:105:105,0:105:3753:0:0:0,-31.6081,-337.969	0/0:147:147,0:147:5284:0:0:0,-44.2514,-475.691	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:107:55,52:55:1980:52:1872:-136.549,0,-146.264	0/1:34:17,16:17:612:16:576:-41.8812,0,-45.1196	0/1:333:189,144:189:6800:144:5126:-361.141,0,-511.824	0/0:137:137,0:137:4913:0:0:0,-41.2411,-442.318	0/1:131:68,63:68:2429:63:2260:-164.184,0,-179.429	0/0:168:165,3:165:5898:3:108:0,-40.4979,-520.849	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:139:78,61:78:2804:61:2173:-153.992,0,-210.756	0/1:114:48,66:48:1724:66:2353:-177.638,0,-121.128	0/1:146:82,64:82:2948:64:2266:-160.246,0,-221.603	0/1:178:69,109:69:2480:109:3916:-299.027,0,-169.87	0/1:127:53,74:53:1904:74:2656:-201.054,0,-133.407	0/0:170:170,0:170:6112:0:0:0,-51.1751,-550.173	0/1:260:130,130:130:4664:130:4665:-341.634,0,-341.653	0/1:53:25,28:25:900:28:1008:-75.0119,0,-65.3664	0/0:120:119,0:119:4280:0:0:0,-35.8226,-385.016	0/0:144:144,0:144:5180:0:0:0,-43.3483,-466.301	0/0:108:108,0:108:3888:0:0:0,-32.5112,-350.112	0/1:219:106,113:106:3808:113:4064:-299.899,0,-276.991	0/1:84:18,66:18:618:66:2372:-188.421,0,-30.6517	0/0:183:183,0:183:6545:0:0:0,-55.0885,-589.096	0/0:142:142,0:142:5081:0:0:0,-42.7463,-457.432
chr01	8960367	.	G	T	34880.8	PASS	AB=0.457896;ABP=74.8727;AC=34;AF=0.180851;AN=188;AO=2145;CIGAR=1X;DP=10676;DPB=10676;DPRA=1.4262;EPP=4660.82;EPPR=18499.6;GTI=1;LEN=1;MEANALT=1.07692;MQM=59.9688;MQMR=59.9953;NS=94;NUMALT=1;ODDS=0.240314;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76684;QR=302821;RO=8526;RPL=0;RPP=4660.82;RPPR=18499.6;RPR=2145;RUN=1;SAF=0;SAP=4660.82;SAR=2145;SRF=0;SRP=18517;SRR=8526;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:36:36,0:36:1268:0:0:0,-10.8371,-114.42	0/1:191:115,76:115:4085:76:2699:-185.655,0,-310.338	0/0:126:126,0:126:4488:0:0:0,-37.9298,-404.089	0/0:247:247,0:247:8820:0:0:0,-74.3544,-793.787	0/0:110:110,0:110:3923:0:0:0,-33.1133,-353.264	0/0:135:135,0:135:4801:0:0:0,-40.639,-432.23	0/1:140:86,54:86:3079:54:1928:-131.653,0,-235.193	0/0:172:172,0:172:6118:0:0:0,-51.7772,-550.721	0/0:98:98,0:98:3460:0:0:0,-29.5009,-311.611	0/0:132:132,0:132:4693:0:0:0,-39.736,-422.532	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:75:75,0:75:2653:0:0:0,-22.5772,-239.016	0/1:60:39,21:39:1380:21:748:-49.5835,0,-106.437	0/0:102:101,0:101:3534:0:0:0,-30.404,-317.91	0/1:66:35,31:35:1256:31:1112:-80.5234,0,-93.4773	0/0:62:62,0:62:2187:0:0:0,-18.6639,-197.093	0/0:83:83,0:83:2945:0:0:0,-24.9855,-265.281	0/1:53:25,28:25:900:28:1000:-74.3608,0,-65.3664	0/1:35:19,16:19:675:16:576:-41.6389,0,-50.5409	0/1:142:83,59:83:2962:59:2116:-147.949,0,-224.066	0/1:199:99,100:99:3535:100:3580:-262.485,0,-258.453	0/1:57:20,37:20:669:37:1323:-102.213,0,-43.3618	0/0:106:106,0:106:3786:0:0:0,-31.9092,-340.938	0/0:155:154,1:154:5492:1:36:0,-43.0614,-490.808	0/0:116:116,0:116:4126:0:0:0,-34.9195,-371.523	0/1:380:198,182:198:7038:182:6502:-470.766,0,-519.091	0/0:157:155,1:155:5485:1:36:0,-43.7222,-490.18	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/1:283:165,118:165:5834:118:4229:-295.597,0,-439.986	0/0:211:211,0:211:7515:0:0:0,-63.5173,-676.391	0/0:177:177,0:177:6275:0:0:0,-53.2823,-564.83	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:27:27,0:27:959:0:0:0,-8.12781,-86.6254	0/0:18:17,1:17:597:1:36:0,-1.82026,-50.4578	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:216:124,92:124:4413:92:3300:-232.196,0,-332.32	0/0:237:237,0:237:8417:0:0:0,-71.3441,-757.536	0/1:78:51,27:51:1801:27:968:-63.957,0,-138.889	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:152:90,62:90:3193:62:2203:-152.778,0,-241.835	0/0:60:60,0:60:2101:0:0:0,-18.0618,-189.356	0/0:167:167,0:167:5922:0:0:0,-50.272,-533.089	0/0:107:107,0:107:3793:0:0:0,-32.2102,-341.567	0/0:88:88,0:88:3147:0:0:0,-26.4906,-283.455	0/0:106:106,0:106:3746:0:0:0,-31.9092,-337.338	0/0:162:162,0:162:5773:0:0:0,-48.7669,-519.686	0/1:98:56,42:56:1957:42:1492:-105.073,0,-146.9	0/1:144:92,52:92:3265:52:1853:-123.7,0,-250.722	0/1:192:98,94:98:3476:94:3372:-245.898,0,-255.254	0/1:173:96,77:96:3415:77:2741:-194.854,0,-255.484	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:135:135,0:135:4773:0:0:0,-40.639,-429.727	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.229	0/0:29:29,0:29:1035:0:0:0,-8.72987,-93.4631	0/0:181:181,0:181:6445:0:0:0,-54.4864,-580.136	0/0:74:74,0:74:2602:0:0:0,-22.2762,-234.427	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:22:13,9:13:460:9:324:-22.8832,0,-35.1127	0/0:91:91,0:91:3232:0:0:0,-27.3937,-291.101	0/0:90:90,0:90:3215:0:0:0,-27.0927,-289.572	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:262:262,0:262:9323:0:0:0,-78.8699,-839.035	0/1:252:110,141:110:3920:141:5044:-378.188,0,-277.076	0/0:107:107,0:107:3796:0:0:0,-32.2102,-341.836	0/0:79:79,0:79:2824:0:0:0,-23.7814,-254.399	0/0:197:197,0:197:6982:0:0:0,-59.3029,-628.447	0/0:93:93,0:93:3314:0:0:0,-27.9958,-298.478	0/0:41:41,0:41:1456:0:0:0,-12.3422,-131.336	0/0:121:121,0:121:4317:0:0:0,-36.4246,-388.706	0/0:96:96,0:96:3429:0:0:0,-28.8989,-308.822	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.239	0/1:139:89,50:89:3156:50:1775:-118.189,0,-242.422	0/1:104:63,41:63:2223:41:1468:-101.109,0,-169.025	0/1:229:143,86:143:5075:86:3080:-208.492,0,-387.955	0/0:201:197,2:197:7010:2:72:0,-53.4281,-624.128	0/1:229:101,128:101:3564:128:4592:-344.508,0,-252.031	0/0:170:167,3:167:5943:3:108:0,-41.0999,-524.901	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:171:88,83:88:3121:83:2980:-216.956,0,-229.64	0/1:110:73,37:73:2616:37:1332:-87.0691,0,-202.574	0/1:231:114,117:114:4038:117:4164:-305.404,0,-294.07	0/1:131:64,67:64:2280:67:2402:-176.998,0,-166.025	0/1:62:31,31:31:1112:31:1104:-81.0068,0,-81.7275	0/0:87:87,0:87:3088:0:0:0,-26.1896,-278.147	0/1:170:83,87:83:2937:87:3106:-228.591,0,-213.389	0/1:43:24,19:24:836:19:675:-48.1327,0,-62.6104	0/0:69:69,0:69:2446:0:0:0,-20.7711,-220.395	0/0:81:81,0:81:2853:0:0:0,-24.3834,-257.006	0/0:41:41,0:41:1449:0:0:0,-12.3422,-130.704	0/1:91:34,57:34:1203:57:2032:-155.759,0,-81.1813	0/1:20:5,15:5:180:15:540:-42.9159,0,-10.5315	0/0:127:127,0:127:4524:0:0:0,-38.2308,-407.327	0/0:141:141,0:141:4943:0:0:0,-42.4452,-445.021
chr01	9677340	.	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chr01	10794217	.	GAAACCAG	GAACCAG	10396.2	PASS	AB=0.536913;ABP=17.1176;AC=18;AF=0.0957447;AN=188;AO=670;CIGAR=1M1D6M;DP=6020;DPB=5936.5;DPRA=1.10242;EPP=1457.9;EPPR=11498.8;GTI=2;LEN=1;MEANALT=1.42424;MQM=60;MQMR=59.9928;NS=94;NUMALT=1;ODDS=0.291369;PAIRED=0;PAIREDR=0;PAO=1.16667;PQA=37.6667;PQR=37.6667;PRO=1.16667;QA=23311;QR=184680;RO=5294;RPL=0;RPP=1457.9;RPPR=11498.8;RPR=670;RUN=1;SAF=0;SAP=1457.9;SAR=670;SRF=0;SRP=11498.8;SRR=5294;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/0:23:22,1:22:753:1:32:0,-3.72438,-64.887	0/1:56:23,32:23:802:32:1104:-82.8445,0,-55.6784	0/0:109:109,0:109:3784:0:0:0,-32.8123,-340.716	0/0:193:192,0:192:6701:0:0:0,-57.7978,-602.881	0/0:17:17,0:17:579:0:0:0,-5.11751,-52.4305	0/0:8:8,0:8:274:0:0:0,-2.40824,-24.9929	0/0:22:22,0:22:767:0:0:0,-6.62266,-69.3507	0/0:73:72,0:72:2498:0:0:0,-21.6742,-224.853	0/0:68:68,0:68:2364:0:0:0,-20.47,-213.021	0/0:86:86,0:86:3015:0:0:0,-25.8886,-271.588	0/0:41:40,0:40:1409:0:0:0,-12.0412,-126.806	0/0:70:70,0:70:2430:0:0:0,-21.0721,-218.959	0/1:65:31,34:31:1094:34:1165:-85.5816,0,-79.2032	0/0:54:54,0:54:1875:0:0:0,-16.2556,-169.028	0/0:25:23,2:23:793:2:64:0,-1.44706,-65.6078	0/0:55:55,0:55:1895:0:0:0,-16.5566,-170.825	0/0:26:26,0:26:910:0:0:0,-7.82678,-82.215	0/1:25:17,8:17:598:8:288:-18.7417,0,-46.6226	0/1:21:12,9:12:419:9:311:-22.0021,0,-31.7214	0/0:89:87,2:87:3021:2:68:0,-20.334,-265.668	0/1:148:56,90:56:1922:90:3173:-241.559,0,-129.018	0/0:23:23,0:23:812:0:0:0,-6.92369,-73.4009	0/0:107:106,0:106:3721:0:0:0,-31.9092,-334.738	0/0:60:56,4:56:1952:4:140:0,-5.11722,-163.013	0/0:43:43,0:43:1490:0:0:0,-12.9443,-134.393	0/0:77:74,1:74:2610:1:32:0,-19.7112,-231.926	0/0:137:137,0:137:4771:0:0:0,-41.2411,-429.562	0/0:30:30,0:30:1053:0:0:0,-9.0309,-95.0808	0/0:131:129,0:129:4516:0:0:0,-38.8329,-406.258	0/0:135:133,1:133:4584:1:36:0,-37.0496,-409.19	0/0:112:110,0:110:3847:0:0:0,-33.1133,-346.091	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2082	0/0:15:14,0:14:499:0:0:0,-4.21442,-44.8865	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:8:8,0:8:283:0:0:0,-2.40824,-25.8126	0/0:22:19,0:19:670:0:0:0,-5.71957,-60.2674	0/0:70:68,0:68:2369:0:0:0,-20.47,-213.11	0/0:92:90,0:90:3090:0:0:0,-27.0927,-277.976	0/1:33:14,17:14:484:17:603:-44.9083,0,-34.1979	0/1:5:2,3:2:65:3:108:-8.57002,0,-4.66838	0/1:148:66,81:66:2293:81:2797:-207.364,0,-162.022	0/0:24:23,0:23:813:0:0:0,-6.92369,-73.1317	0/0:78:78,0:78:2712:0:0:0,-23.4803,-244.326	0/0:43:43,0:43:1479:0:0:0,-12.9443,-133.4	0/0:53:52,0:52:1793:0:0:0,-15.6536,-161.29	0/0:56:55,0:55:1903:0:0:0,-16.5566,-171.274	0/0:56:56,0:56:1969:0:0:0,-16.8577,-177.485	0/0:81:80,1:80:2773:1:32:0,-21.1841,-246.613	0/0:57:56,1:56:1938:1:36:0,-13.5604,-171.098	0/0:41:39,1:39:1392:1:36:0,-8.76282,-122.019	0/0:56:55,0:55:1907:0:0:0,-16.5566,-171.547	0/0:11:11,0:11:388:0:0:0,-3.31133,-35.2571	0/0:123:121,0:121:4250:0:0:0,-36.4246,-382.369	0/0:48:48,0:48:1676:0:0:0,-14.4494,-151.127	0/0:8:8,0:8:263:0:0:0,-2.40824,-23.9903	0/0:149:148,0:148:5172:0:0:0,-44.5524,-465.375	0/0:42:42,0:42:1471:0:0:0,-12.6433,-132.685	0/0:11:11,0:11:385:0:0:0,-3.31133,-34.9854	0/0:11:10,1:10:355:1:27:0,-0.611547,-29.5911	0/0:69:69,0:69:2399:0:0:0,-20.7711,-216.167	0/0:70:70,0:70:2442:0:0:0,-21.0721,-220.035	0/0:6:6,0:6:207:0:0:0,-1.80618,-18.9678	0/0:225:223,0:223:7816:0:0:0,-67.1297,-703.146	0/0:72:69,3:69:2372:3:95:0,-12.8099,-204.873	0/0:30:29,0:29:1022:0:0:0,-8.72987,-91.8827	0/0:65:64,0:64:2245:0:0:0,-19.2659,-201.955	0/0:201:200,0:200:7018:0:0:0,-60.206,-631.491	0/0:123:122,1:122:4265:1:32:0,-33.8274,-380.836	0/0:24:23,0:23:814:0:0:0,-6.92369,-73.222	0/0:56:56,0:56:1984:0:0:0,-16.8577,-178.836	0/0:33:33,0:33:1151:0:0:0,-9.93399,-103.896	0/0:37:37,0:37:1316:0:0:0,-11.1381,-118.743	0/1:87:41,46:41:1429:46:1597:-117.828,0,-102.716	0/1:56:22,34:22:764:34:1183:-89.9162,0,-52.2212	0/1:136:58,77:58:1995:77:2658:-198.523,0,-138.882	0/0:138:136,0:136:4782:0:0:0,-40.9401,-430.289	0/1:39:27,12:27:916:12:419:-26.3025,0,-71.0094	0/0:82:81,1:81:2856:1:36:0,-21.0862,-253.683	0/0:16:16,0:16:564:0:0:0,-4.81648,-51.09	0/1:119:57,60:57:1988:60:2080:-151.886,0,-143.614	0/1:121:54,67:54:1867:67:2354:-175.695,0,-131.883	0/0:122:114,7:114:4007:7:235:0,-15.3035,-339.346	0/0:20:18,0:18:628:0:0:0,-5.41854,-56.4861	0/0:26:25,0:25:880:0:0:0,-7.52575,-79.158	0/0:37:36,0:36:1238:0:0:0,-10.8371,-111.468	0/0:59:55,3:55:1938:3:104:0,-8.11344,-164.991	0/1:20:10,10:10:351:10:347:-25.543,0,-25.907	0/0:69:66,0:66:2300:0:0:0,-19.868,-206.904	0/0:47:46,0:46:1627:0:0:0,-13.8474,-146.37	0/0:43:43,0:43:1502:0:0:0,-12.9443,-135.473	0/1:91:36,55:36:1274:55:1948:-148.202,0,-87.5703	0/1:17:14,2:14:466:2:63:-0.821822,0,-37.0831	0/0:99:99,0:99:3445:0:0:0,-29.802,-310.269	0/0:83:82,0:82:2846:0:0:0,-24.6845,-256.109
chr01	10794225	.	C	A	111891	PASS	AB=0.439089;ABP=113.321;AC=153;AF=0.81383;AN=188;AO=5334;CIGAR=1X;DP=7285;DPB=7285;DPRA=0;EPP=11585.6;EPPR=4211.34;GTI=6;LEN=1;MEANALT=1.03191;MQM=59.985;MQMR=59.9943;NS=94;NUMALT=1;ODDS=0.384186;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=190810;QR=69160;RO=1946;RPL=0;RPP=11585.6;RPPR=4211.34;RPR=5334;RUN=1;SAF=0;SAP=11585.6;SAR=5334;SRF=0;SRP=4228.7;SRR=1946;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:22:1,21:1:36:21:744:-63.6861,-3.02439,0	0/1:58:35,23:35:1233:23:805:-55.3073,0,-93.8124	1/1:112:1,111:1:36:111:3975:-354.341,-30.1171,0	1/1:192:0,192:0:0:192:6846:-615.981,-57.7978,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:42:20,22:20:720:22:792:-58.9624,0,-52.4855	1/1:78:0,78:0:0:78:2780:-250.439,-23.4803,0	1/1:68:0,68:0:0:68:2436:-219.495,-20.47,0	1/1:88:0,87:0:0:87:3114:-280.127,-26.1896,0	1/1:42:1,41:1:21:41:1466:-130.136,-10.5433,0	1/1:71:0,71:0:0:71:2531:-228.041,-21.3731,0	0/1:65:33,32:33:1180:32:1144:-83.7026,0,-86.9411	1/1:55:0,55:0:0:55:1976:-178.115,-16.5567,0	0/1:51:29,22:29:1036:22:792:-56.2531,0,-78.2014	1/1:55:0,55:0:0:55:1954:-176.134,-16.5567,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:25:8,17:8:284:17:612:-47.8877,0,-18.3776	0/1:21:10,11:10:360:11:396:-29.6611,0,-26.4227	0/1:195:107,88:107:3812:88:3147:-224.754,0,-284.576	0/1:163:105,58:105:3737:58:2066:-137.142,0,-287.463	0/1:74:51,23:51:1813:23:824:-52.2071,0,-141.173	1/1:110:3,107:3:108:107:3852:-336.785,-23.0381,0	1/1:59:4,55:4:144:55:1963:-163.631,-4.44715,0	1/1:43:0,43:0:0:43:1540:-138.893,-12.9443,0	0/1:209:132,77:132:4657:77:2760:-185.726,0,-356.377	1/1:137:0,137:0:0:137:4913:-442.318,-41.2411,0	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	0/1:284:151,133:151:5381:133:4773:-344.231,0,-398.93	1/1:132:1,131:1:36:131:4686:-418.3,-36.1377,0	1/1:111:0,108:0:0:108:3864:-347.593,-32.5112,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:5:3,2:3:104:2:72:-5.33157,0,-8.19766	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	0/1:130:58,72:58:2061:72:2579:-193.225,0,-146.626	1/1:90:0,90:0:0:90:3209:-289.032,-27.0927,0	0/1:33:20,13:20:716:13:468:-32.5257,0,-54.8337	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:155:89,66:89:3158:66:2335:-163.723,0,-237.784	1/1:24:1,23:1:36:23:819:-70.4333,-3.62645,0	1/1:74:0,74:0:0:74:2651:-238.835,-22.2762,0	1/1:42:0,42:0:0:42:1504:-135.655,-12.6433,0	1/1:53:0,53:0:0:53:1908:-171.998,-15.9546,0	1/1:55:0,55:0:0:55:1967:-177.301,-16.5567,0	1/1:60:0,60:0:0:60:2137:-192.596,-18.0618,0	0/1:177:97,80:97:3438:80:2857:-204.084,0,-256.352	0/1:101:44,57:44:1552:57:2031:-152.658,0,-109.565	0/1:99:59,40:59:2120:40:1432:-99.3751,0,-161.267	0/1:102:46,56:46:1656:56:1993:-148.937,0,-118.623	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:123:0,123:0:0:123:4396:-395.81,-37.0267,0	1/1:49:0,49:0:0:49:1743:-157.154,-14.7505,0	1/1:8:0,8:0:0:8:264:-24.0803,-2.40824,0	1/1:151:0,151:0:0:151:5414:-487.388,-45.4555,0	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	1/1:11:0,11:0:0:11:391:-35.5293,-3.31133,0	0/1:16:6,10:6:216:10:360:-27.9278,0,-14.974	1/1:68:0,68:0:0:68:2440:-219.855,-20.47,0	1/1:71:0,71:0:0:71:2539:-228.76,-21.3731,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:224:0,224:0:0:224:8025:-722.267,-67.4307,0	0/1:183:113,70:113:4002:70:2482:-168.545,0,-305.279	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	1/1:64:1,63:1:36:63:2252:-199.345,-15.6676,0	1/1:208:9,199:9:324:199:7114:-610.81,-33.1084,0	1/1:125:3,122:3:108:122:4372:-383.578,-27.5536,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:58:0,58:0:0:58:2079:-187.38,-17.4597,0	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	1/1:37:0,36:0:0:36:1296:-116.584,-10.8371,0	0/1:97:55,42:55:1964:42:1495:-105.644,0,-147.835	0/1:56:36,20:36:1284:20:720:-48.2711,0,-99.0057	0/1:141:83,58:83:2908:58:2070:-144.125,0,-219.506	1/1:137:0,137:0:0:137:4903:-441.417,-41.2411,0	0/1:43:15,28:15:536:28:1000:-77.3711,0,-35.6282	1/1:83:1,82:1:36:82:2948:-261.955,-21.3872,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:120:63,57:63:2246:57:2048:-148.468,0,-166.279	0/1:129:75,54:75:2662:54:1936:-135.684,0,-200.99	0/1:257:143,114:143:5079:114:4083:-290.29,0,-379.891	0/1:45:28,17:28:1004:17:612:-41.8671,0,-77.1295	0/1:58:32,26:32:1139:26:932:-66.7391,0,-85.3586	1/1:35:0,35:0:0:35:1245:-112.354,-10.5361,0	0/1:120:64,56:64:2283:56:1988:-143.068,0,-169.608	0/1:20:10,10:10:360:10:360:-26.7237,0,-26.7237	1/1:70:0,70:0:0:70:2499:-225.162,-21.0721,0	1/1:48:0,48:0:0:48:1719:-154.996,-14.4494,0	1/1:43:0,43:0:0:43:1525:-137.541,-12.9443,0	0/1:93:58,35:58:2076:35:1256:-85.3495,0,-159.115	0/1:51:39,12:39:1354:12:432:-23.8687,0,-106.802	1/1:99:0,99:0:0:99:3551:-319.797,-29.802,0	1/1:82:0,82:0:0:82:2936:-264.474,-24.6845,0
chr01	10794233	.	A	G	32428	PASS	AB=0.559883;ABP=109.378;AC=35;AF=0.18617;AN=188;AO=1937;CIGAR=1X;DP=7248;DPB=7248;DPRA=1.6891;EPP=4209.15;EPPR=11507.5;GTI=6;LEN=1;MEANALT=1.08889;MQM=59.9928;MQMR=59.9894;NS=94;NUMALT=1;ODDS=0.385839;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68501;QR=189311;RO=5306;RPL=0;RPP=4209.15;RPPR=11507.5;RPR=1937;RUN=1;SAF=0;SAP=4209.15;SAR=1937;SRF=0;SRP=11524.8;SRR=5306;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:23:22,1:22:776:1:36:0,-3.32541,-66.5639	0/1:58:23,35:23:805:35:1234:-93.9029,0,-55.3078	0/0:112:111,1:111:3983:1:36:0,-30.1171,-355.06	0/0:193:193,0:193:6871:0:0:0,-58.0988,-618.423	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:44:22,22:22:783:22:779:-57.1867,0,-57.5476	0/0:76:75,1:75:2656:1:36:0,-19.28,-235.687	0/0:68:68,0:68:2401:0:0:0,-20.47,-216.346	0/0:87:87,0:87:3089:0:0:0,-26.1896,-278.235	0/0:42:42,0:42:1492:0:0:0,-12.6433,-134.575	0/0:68:68,0:68:2398:0:0:0,-20.47,-216.077	0/1:66:31,35:31:1093:35:1225:-90.6837,0,-78.8097	0/0:55:55,0:55:1955:0:0:0,-16.5566,-176.225	0/1:53:22,31:22:784:31:1084:-81.9115,0,-54.9293	0/0:54:54,0:54:1913:0:0:0,-16.2556,-172.445	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3611	0/1:25:17,8:17:604:8:272:-17.2854,0,-47.1649	0/1:21:12,9:12:428:9:309:-21.8191,0,-32.5372	0/1:194:88,106:88:3128:106:3755:-279.75,0,-223.345	0/1:166:58,108:58:2070:108:3800:-292.228,0,-136.598	0/1:73:22,51:22:792:51:1741:-134.991,0,-49.6305	0/0:110:106,3:106:3784:3:104:0,-23.3835,-331.08	0/0:58:54,4:54:1927:4:144:0,-4.14612,-160.392	0/0:42:42,0:42:1488:0:0:0,-12.6433,-134.212	0/1:205:76,128:76:2728:128:4563:-349.157,0,-184.081	0/0:132:132,0:132:4702:0:0:0,-39.736,-423.339	0/0:30:30,0:30:1058:0:0:0,-9.0309,-95.5296	0/1:276:129,147:129:4615:147:5235:-388.205,0,-332.429	0/0:131:130,1:130:4618:1:36:0,-35.8367,-412.181	0/0:110:110,0:110:3940:0:0:0,-33.1133,-354.792	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/1:133:73,60:73:2607:60:2126:-151.57,0,-194.841	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.937	0/1:34:16,18:16:576:18:625:-46.3375,0,-41.94	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:156:65,91:65:2319:91:3204:-241.621,0,-161.782	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3611	0/0:74:74,0:74:2643:0:0:0,-22.2762,-238.116	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:51:51,0:51:1811:0:0:0,-15.3525,-163.271	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.709	0/1:172:76,96:76:2708:96:3421:-256.326,0,-192.185	0/1:102:57,45:57:1996:45:1596:-113.223,0,-149.204	0/1:99:40,59:40:1436:59:2094:-158.927,0,-99.7357	0/1:102:55,47:55:1962:47:1684:-121.142,0,-146.149	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:122:122,0:122:4372:0:0:0,-36.7257,-393.653	0/0:49:49,0:49:1738:0:0:0,-14.7505,-156.703	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:150:150,0:150:5384:0:0:0,-45.1545,-484.69	0/0:40:40,0:40:1425:0:0:0,-12.0412,-128.545	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:16:10,6:10:356:6:212:-14.6083,0,-27.5648	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.806	0/0:70:69,0:69:2415:0:0:0,-20.7711,-217.285	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:220:220,0:220:7858:0:0:0,-66.2266,-707.246	0/1:178:68,110:68:2436:110:3919:-299.321,0,-165.912	0/0:30:30,0:30:1067:0:0:0,-9.0309,-96.3412	0/0:66:66,0:66:2376:0:0:0,-19.868,-214.097	0/0:205:196,9:196:7015:9:324:0,-32.2053,-601.906	0/0:124:120,3:120:4299:3:108:0,-27.199,-377.047	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:57:57,0:57:2039:0:0:0,-17.1587,-183.781	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/1:94:42,52:42:1504:52:1852:-138.662,0,-107.358	0/1:59:22,37:22:792:37:1311:-100.53,0,-53.8449	0/1:142:59,83:59:2092:83:2932:-221.367,0,-145.801	0/0:138:138,0:138:4940:0:0:0,-41.5421,-444.748	0/1:39:26,13:26:916:13:460:-29.9943,0,-71.0163	0/0:82:81,1:81:2912:1:36:0,-21.0862,-258.716	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:121:58,63:58:2080:63:2223:-163.907,0,-151.046	0/1:131:55,76:55:1945:76:2697:-203.539,0,-135.889	0/1:257:115,142:115:4065:142:5045:-376.831,0,-288.673	0/1:48:20,28:20:712:28:983:-74.3331,0,-49.9572	0/1:57:25,32:25:900:32:1113:-83.3164,0,-64.1623	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.863	0/1:119:55,64:55:1950:64:2265:-168.289,0,-139.952	0/1:20:9,11:9:320:11:379:-28.42,0,-23.1218	0/0:71:70,1:70:2508:1:36:0,-17.7749,-222.374	0/0:48:48,0:48:1712:0:0:0,-14.4494,-154.366	0/0:43:43,0:43:1531:0:0:0,-12.9443,-138.082	0/1:94:36,57:36:1292:57:1991:-151.106,0,-88.2282	0/1:51:15,36:15:536:36:1260:-98.3486,0,-33.2223	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.767	0/0:82:82,0:82:2926:0:0:0,-24.6845,-263.574
chr01	11463978	.	A	G	54242.3	PASS	AB=0.507876;ABP=6.39655;AC=36;AF=0.191489;AN=188;AO=3206;CIGAR=1X;DP=13510;DPB=13510;DPRA=1.4459;EPP=6930.05;EPPR=22148.2;GTI=6;LEN=1;MEANALT=1.09524;MQM=59.9925;MQMR=59.9932;NS=94;NUMALT=1;ODDS=0.133203;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=114284;QR=368196;RO=10298;RPL=3202;RPP=6930.05;RPPR=22148.2;RPR=4;RUN=1;SAF=0;SAP=6964.75;SAR=3206;SRF=0;SRP=22364.8;SRR=10298;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:30:30,0:30:1068:0:0:0,-9.0309,-96.4321	0/1:175:103,72:103:3684:72:2547:-176.798,0,-279.083	0/0:188:188,0:188:6735:0:0:0,-56.5936,-606.223	0/0:314:313,0:313:11215:0:0:0,-94.2224,-1009.02	0/0:126:126,0:126:4520:0:0:0,-37.9298,-406.967	0/0:82:82,0:82:2935:0:0:0,-24.6845,-264.384	0/1:208:99,108:99:3548:108:3828:-282.173,0,-256.984	0/0:184:184,0:184:6540:0:0:0,-55.3895,-588.497	0/0:155:155,0:155:5529:0:0:0,-46.6596,-497.735	0/0:68:68,0:68:2423:0:0:0,-20.47,-218.326	0/0:143:143,0:143:5097:0:0:0,-43.0473,-458.874	0/0:101:101,0:101:3599:0:0:0,-30.404,-324.114	0/1:119:60,59:60:2147:59:2116:-154.886,0,-157.674	0/0:133:133,0:133:4752:0:0:0,-40.037,-427.836	0/1:88:51,37:51:1832:37:1328:-93.3316,0,-138.67	0/0:87:86,1:86:3067:1:36:0,-22.5913,-272.661	0/0:117:117,0:117:4167:0:0:0,-35.2205,-375.214	0/1:100:47,53:47:1692:53:1900:-141.175,0,-122.464	0/1:86:42,44:42:1482:44:1571:-115.792,0,-107.784	0/1:312:131,180:131:4696:180:6440:-485.707,0,-328.819	0/1:197:88,109:88:3148:109:3877:-289.82,0,-224.243	0/1:113:35,78:35:1256:78:2771:-215.615,0,-79.3289	0/0:106:106,0:106:3768:0:0:0,-31.9092,-339.319	0/1:103:92,11:92:3287:11:396:-4.97666,0,-265.043	0/0:110:109,1:109:3900:1:36:0,-29.515,-347.596	0/1:443:220,222:220:7899:222:7917:-579.142,0,-577.516	0/0:265:265,0:265:9501:0:0:0,-79.7729,-855.044	0/0:52:52,0:52:1850:0:0:0,-15.6536,-166.779	0/1:367:189,178:189:6732:178:6375:-463.361,0,-495.478	0/0:104:104,0:104:3715:0:0:0,-31.3071,-334.552	0/0:201:199,1:199:7119:1:32:0,-57.2716,-637.623	0/0:9:9,0:9:312:0:0:0,-2.70927,-28.4154	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:12:3,9:3:108:9:324:-25.8935,0,-6.46281	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:227:119,108:119:4243:108:3855:-278.81,0,-313.717	0/0:207:207,0:207:7419:0:0:0,-62.3132,-667.746	0/1:110:59,51:59:2107:51:1824:-131.328,0,-156.785	0/1:11:7,4:7:252:4:140:-9.63325,0,-19.7176	0/1:262:124,138:124:4435:138:4893:-361.656,0,-320.451	0/0:61:61,0:61:2180:0:0:0,-18.3628,-196.466	0/0:164:164,0:164:5876:0:0:0,-49.3689,-528.95	0/0:115:115,0:115:4106:0:0:0,-34.6184,-369.725	0/0:90:90,0:90:3210:0:0:0,-27.0927,-289.122	0/0:124:124,0:124:4436:0:0:0,-37.3277,-399.412	0/0:166:166,0:166:5925:0:0:0,-49.971,-533.359	0/1:261:144,117:144:5132:117:4163:-296.285,0,-383.453	0/1:153:69,84:69:2435:84:2998:-223.993,0,-173.349	0/1:241:108,133:108:3872:133:4753:-355.38,0,-276.126	0/1:227:111,116:111:3972:116:4123:-302.924,0,-289.337	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:247:247,0:247:8866:0:0:0,-74.3544,-797.92	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.592	0/1:11:10,1:10:351:1:36:-0.286945,0,-28.6153	0/0:213:213,0:213:7604:0:0:0,-64.1194,-684.398	0/0:54:54,0:54:1919:0:0:0,-16.2556,-172.986	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:137:137,0:137:4907:0:0:0,-41.2411,-441.78	0/0:174:170,4:170:6083:4:144:0,-39.0656,-534.258	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:182:182,0:182:6488:0:0:0,-54.7875,-584.006	0/0:333:332,0:332:11865:0:0:0,-99.942,-1067.5	0/0:98:98,0:98:3504:0:0:0,-29.5009,-315.571	0/0:158:158,0:158:5647:0:0:0,-47.5627,-508.351	0/0:283:279,4:279:9962:4:140:0,-72.2469,-883.574	0/0:138:135,3:135:4827:3:99:0,-32.3056,-425.348	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/0:104:104,0:104:3728:0:0:0,-31.3071,-335.721	0/0:146:146,0:146:5252:0:0:0,-43.9504,-472.814	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/1:99:50,49:50:1787:49:1730:-126.182,0,-131.31	0/1:95:16,79:16:576:79:2786:-222.383,0,-23.5771	0/1:403:224,179:224:8001:179:6357:-450.909,0,-598.797	0/0:240:240,0:240:8590:0:0:0,-72.2472,-773.095	0/1:211:86,125:86:3054:125:4468:-338.773,0,-211.572	0/0:165:165,0:165:5878:0:0:0,-49.6699,-529.133	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/1:246:126,120:126:4512:120:4249:-308.537,0,-332.195	0/1:175:71,104:71:2544:104:3704:-280.881,0,-176.53	0/1:455:233,222:233:8321:222:7931:-576.847,0,-611.93	0/1:146:70,76:70:2495:76:2710:-200.193,0,-180.852	0/1:112:53,59:53:1884:59:2112:-156.634,0,-136.123	0/0:120:120,0:120:4304:0:0:0,-36.1236,-387.536	0/1:206:110,96:110:3939:96:3435:-247.351,0,-292.689	0/1:51:21,30:21:748:30:1080:-82.1607,0,-52.2928	0/0:109:109,0:109:3912:0:0:0,-32.8123,-352.272	0/0:123:123,0:123:4399:0:0:0,-37.0267,-396.082	0/0:106:106,0:106:3790:0:0:0,-31.9092,-341.297	0/1:171:90,81:90:3232:81:2912:-210.838,0,-239.625	0/1:80:25,55:25:900:55:1968:-153.313,0,-57.2386	0/0:191:191,0:191:6856:0:0:0,-57.4967,-617.107	0/0:144:144,0:144:5164:0:0:0,-43.3483,-464.273
chr01	11625384	.	C	A	124270	PASS	AB=0.522884;ABP=16.8249;AC=153;AF=0.81383;AN=188;AO=5867;CIGAR=1X;DP=7328;DPB=7328;DPRA=0;EPP=12743;EPPR=3164.68;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.7237;MQMR=59.9514;NS=94;NUMALT=1;ODDS=2.81716;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=207651;QR=51971;RO=1460;RPL=2;RPP=12725.7;RPPR=3164.68;RPR=5865;RUN=1;SAF=2;SAP=12725.7;SAR=5865;SRF=0;SRP=3173.36;SRR=1460;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:67:0,67:0:0:67:2360:-212.636,-20.169,0	0/1:54:24,30:24:860:30:1072:-80.5029,0,-61.4662	1/1:128:0,127:0:0:127:4510:-405.654,-38.2308,0	1/1:186:0,186:0:0:186:6590:-593.174,-55.9916,0	1/1:48:0,48:0:0:48:1664:-150.037,-14.4494,0	1/1:83:0,83:0:0:83:2959:-266.529,-24.9855,0	0/1:96:40,56:40:1413:56:1954:-147.231,0,-98.5664	1/1:97:0,97:0:0:97:3427:-308.603,-29.1999,0	1/1:124:0,124:0:0:124:4384:-394.663,-37.3277,0	1/1:85:0,85:0:0:85:3001:-270.111,-25.5876,0	1/1:34:0,34:0:0:34:1207:-108.928,-10.235,0	1/1:99:0,99:0:0:99:3475:-312.92,-29.802,0	0/1:60:29,31:29:1006:31:1097:-80.9753,0,-72.7873	1/1:35:0,35:0:0:35:1244:-112.265,-10.5361,0	0/1:46:22,24:22:784:24:860:-63.8745,0,-57.0365	1/1:32:0,32:0:0:32:1148:-103.627,-9.63296,0	1/1:30:1,29:1:36:29:1023:-88.7835,-5.43263,0	0/1:22:13,9:13:464:9:324:-22.875,0,-35.4748	0/1:27:13,14:13:468:14:504:-37.5703,0,-34.3318	0/1:102:51,51:51:1820:51:1776:-129.41,0,-133.376	0/1:119:53,66:53:1855:66:2318:-173.049,0,-131.397	0/1:65:47,18:47:1672:18:640:-38.3624,0,-131.198	1/1:99:0,99:0:0:99:3523:-317.257,-29.802,0	1/1:74:4,70:4:144:70:2500:-211.935,-8.9626,0	1/1:63:0,63:0:0:63:2246:-202.402,-18.9649,0	0/1:304:146,158:146:5220:158:5584:-411.123,0,-378.408	1/1:196:0,196:0:0:196:6895:-620.557,-59.0019,0	1/1:25:0,25:0:0:25:874:-78.9706,-7.52575,0	0/1:179:63,116:63:2251:116:4135:-318.423,0,-148.968	1/1:158:1,157:1:36:157:5553:-496.263,-43.9645,0	1/1:66:0,66:0:0:66:2368:-213.376,-19.868,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:5:1,4:1:32:4:144:-11.8085,0,-1.69416	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	1/1:20:0,20:0:0:20:690:-62.4063,-6.0206,0	0/1:144:72,72:72:2561:72:2556:-186.943,0,-187.391	1/1:117:0,117:0:0:117:4144:-373.136,-35.2205,0	0/1:42:22,20:22:784:20:707:-51.3113,0,-58.2407	0/1:19:12,7:12:428:7:248:-16.9446,0,-33.094	0/1:128:58,70:58:2080:70:2441:-181.364,0,-148.938	1/1:22:0,22:0:0:22:775:-70.0642,-6.62266,0	1/1:137:0,137:0:0:137:4851:-436.707,-41.2411,0	1/1:50:0,50:0:0:50:1787:-161.105,-15.0515,0	1/1:52:0,52:0:0:52:1856:-167.315,-15.6536,0	1/1:139:0,139:0:0:139:4833:-435.092,-41.8432,0	1/1:73:0,73:0:0:73:2596:-233.863,-21.9752,0	0/1:151:75,76:75:2670:76:2699:-197.677,0,-195.089	0/1:55:36,19:36:1292:19:671:-44.1568,0,-100.027	0/1:57:24,33:24:860:33:1179:-89.2535,0,-60.5631	0/1:147:64,83:64:2300:83:2903:-217.254,0,-163.009	1/1:9:0,9:0:0:9:324:-29.5054,-2.70927,0	1/1:81:0,81:0:0:81:2859:-257.521,-24.3834,0	1/1:37:0,37:0:0:37:1307:-117.924,-11.1381,0	1/1:16:0,16:0:0:16:567:-51.3584,-4.81648,0	1/1:122:0,122:0:0:122:4326:-389.503,-36.7257,0	1/1:46:0,46:0:0:46:1605:-144.728,-13.8474,0	1/1:22:0,22:0:0:22:773:-69.8886,-6.62266,0	0/1:23:13,10:13:460:10:356:-25.4576,0,-34.8117	1/1:127:0,127:0:0:127:4474:-402.519,-38.2308,0	1/1:72:0,72:0:0:72:2551:-229.747,-21.6742,0	1/1:11:0,11:0:0:11:392:-35.6177,-3.31133,0	1/1:142:0,142:0:0:142:5043:-454.004,-42.7463,0	1/1:131:1,130:1:32:130:4603:-411.225,-36.2356,0	1/1:69:0,69:0:0:69:2417:-217.777,-20.7711,0	1/1:75:1,74:1:36:74:2644:-234.598,-18.979,0	1/1:81:0,81:0:0:81:2836:-255.471,-24.3834,0	1/1:131:3,128:3:108:128:4575:-401.84,-29.3598,0	1/1:35:0,35:0:0:35:1252:-112.966,-10.5361,0	1/1:61:0,61:0:0:61:2118:-190.777,-18.3628,0	1/1:35:0,35:0:0:35:1244:-112.263,-10.5361,0	1/1:24:0,24:0:0:24:851:-76.9095,-7.22472,0	0/1:184:88,96:88:3123:96:3370:-248.103,0,-225.908	0/1:112:49,63:49:1752:63:2220:-166.331,0,-124.249	0/1:135:68,67:68:2406:67:2365:-172.449,0,-176.149	1/1:104:0,104:0:0:104:3707:-333.826,-31.3071,0	0/1:84:51,33:51:1815:33:1183:-81.4396,0,-138.154	1/1:146:0,146:0:0:146:5195:-467.643,-43.9504,0	1/1:11:0,11:0:0:11:388:-35.2574,-3.31133,0	0/1:76:42,34:42:1499:34:1206:-85.9662,0,-112.326	0/1:55:28,27:28:1000:27:959:-70.0687,0,-73.7587	0/1:174:69,105:69:2480:105:3743:-284.628,0,-171.073	0/1:40:18,22:18:635:22:792:-59.5645,0,-45.4358	0/1:42:20,22:20:708:22:788:-58.6015,0,-51.4023	1/1:37:0,37:0:0:37:1316:-118.736,-11.1381,0	0/1:109:55,54:55:1934:54:1896:-138.1,0,-141.523	0/1:18:6,12:6:208:12:432:-33.8027,0,-13.6405	1/1:71:0,71:0:0:71:2517:-226.735,-21.3731,0	1/1:69:0,69:0:0:69:2471:-222.634,-20.7711,0	1/1:19:0,19:0:0:19:684:-61.8857,-5.71957,0	0/1:91:38,53:38:1347:53:1875:-141.635,0,-94.1357	0/1:65:38,27:38:1356:27:968:-67.8657,0,-102.774	1/1:90:0,90:0:0:90:3182:-286.606,-27.0927,0	1/1:63:0,63:0:0:63:2226:-200.597,-18.9649,0
chr01	11637844	.	G	T	19375.5	PASS	AB=0.468214;ABP=20.404;AC=34;AF=0.180851;AN=188;AO=935;CIGAR=1X;DP=5069;DPB=5069;DPRA=1.17046;EPP=604.708;EPPR=8973.36;GTI=0;LEN=1;MEANALT=1.05128;MQM=59.907;MQMR=30.2111;NS=94;NUMALT=1;ODDS=4.98089;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=33445;QR=147549;RO=4131;RPL=722;RPP=604.708;RPPR=8973.36;RPR=213;RUN=1;SAF=935;SAP=2033.34;SAR=0;SRF=4131;SRP=8973.36;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:11:11,0:11:396:0:0:0,-3.31133,-27.0393	0/1:44:32,12:32:1148:12:423:-25.1597,0,-66.0364	0/0:28:28,0:28:1008:0:0:0,-8.42884,-68.7262	0/0:41:41,0:41:1468:0:0:0,-12.3422,-110.637	0/0:18:18,0:18:648:0:0:0,-5.41854,-47.1642	0/0:13:13,0:13:468:0:0:0,-3.91339,-32.2872	0/1:28:15,13:15:540:13:468:-34.0308,0,-32.9753	0/0:36:36,0:36:1288:0:0:0,-10.8371,-88.7793	0/0:26:26,0:26:932:0:0:0,-7.82678,-64.0567	0/0:23:23,0:23:809:0:0:0,-6.92369,-62.2797	0/0:127:127,0:127:4523:0:0:0,-38.2308,-340.93	0/0:29:29,0:29:1036:0:0:0,-8.72987,-71.5411	0/1:31:11,20:11:383:20:716:-55.4358,0,-17.6926	0/0:24:24,0:24:839:0:0:0,-7.22472,-62.2313	0/1:21:11,10:11:396:10:345:-25.0592,0,-23.8547	0/0:9:9,0:9:320:0:0:0,-2.70927,-22.6441	0/0:27:27,0:27:968:0:0:0,-8.12781,-66.3921	0/1:15:8,7:8:288:7:252:-18.5135,0,-15.4588	0/1:93:51,42:51:1824:42:1504:-107.659,0,-96.9874	0/1:50:29,21:29:1044:21:752:-52.9548,0,-63.9658	0/1:40:22,18:22:788:18:640:-45.8881,0,-44.9688	0/1:34:14,20:14:504:20:716:-54.5327,0,-30.2478	0/0:36:36,0:36:1269:0:0:0,-10.8371,-97.5847	0/0:24:23,1:23:824:1:36:0,-3.62644,-56.3739	0/0:23:23,0:23:820:0:0:0,-6.92369,-60.0491	0/1:74:42,32:42:1512:32:1140:-80.633,0,-97.3057	0/0:70:70,0:70:2512:0:0:0,-21.0721,-181.644	0/0:10:10,0:10:356:0:0:0,-3.0103,-26.3105	0/1:69:47,22:47:1684:22:788:-50.4728,0,-112.877	0/0:33:33,0:33:1160:0:0:0,-9.93399,-84.9844	0/0:18:17,0:17:608:0:0:0,-5.11751,-46.0986	0/0:204:204,0:204:7309:0:0:0,-61.4101,-529.842	0/0:143:143,0:143:5128:0:0:0,-43.0473,-372.401	0/1:80:36,44:36:1277:44:1580:-118.409,0,-64.1254	0/0:231:231,0:231:8256:0:0:0,-69.5379,-568.359	0/0:85:85,0:85:3056:0:0:0,-25.5875,-209.858	0/1:84:39,45:39:1396:45:1603:-119.273,0,-84.7437	0/0:52:52,0:52:1868:0:0:0,-15.6536,-135.735	0/1:162:72,90:72:2554:90:3219:-241.165,0,-127.903	0/1:111:83,28:83:2964:28:1004:-57.2615,0,-181.399	0/1:40:25,15:25:896:15:540:-36.8953,0,-53.4573	0/0:91:91,0:91:3235:0:0:0,-27.3937,-235.069	0/0:41:41,0:41:1463:0:0:0,-12.3422,-106.806	0/0:30:30,0:30:1071:0:0:0,-9.0309,-81.2015	0/0:32:32,0:32:1139:0:0:0,-9.63296,-86.7186	0/0:38:38,0:38:1360:0:0:0,-11.4391,-107.445	0/0:11:11,0:11:396:0:0:0,-3.31133,-27.4392	0/1:45:21,24:21:756:24:860:-64.1755,0,-44.4899	0/1:29:14,15:14:500:15:531:-39.0725,0,-29.0437	0/1:30:16,13:16:576:13:464:-33.008,0,-35.2043	0/1:37:22,15:22:792:15:524:-36.3415,0,-51.8873	0/0:148:148,0:148:5290:0:0:0,-44.5524,-395.913	0/0:34:34,0:34:1224:0:0:0,-10.235,-84.3022	0/0:11:11,0:11:392:0:0:0,-3.31133,-31.5735	0/0:89:89,0:89:3177:0:0:0,-26.7917,-219.242	0/0:23:23,0:23:815:0:0:0,-6.92369,-59.9308	0/0:16:16,0:16:561:0:0:0,-4.81648,-41.6415	0/0:73:73,0:73:2598:0:0:0,-21.9752,-203.675	0/1:192:116,75:116:4115:75:2692:-184.668,0,-260.253	0/0:13:12,1:12:428:1:36:0,-0.315115,-27.7861	0/0:52:52,0:52:1846:0:0:0,-15.6536,-140.893	0/0:100:100,0:100:3573:0:0:0,-30.103,-269.537	0/0:24:24,0:24:845:0:0:0,-7.22472,-66.7835	0/0:48:48,0:48:1686:0:0:0,-14.4494,-129.785	0/0:25:25,0:25:892:0:0:0,-7.52575,-65.3945	0/0:24:24,0:24:864:0:0:0,-7.22472,-64.3438	0/0:54:51,3:51:1836:3:104:0,-6.55281,-129.833	0/0:56:55,1:55:1980:1:36:0,-14.7711,-148.573	0/0:66:66,0:66:2372:0:0:0,-19.868,-172.31	0/0:25:25,0:25:892:0:0:0,-7.52575,-61.8413	0/0:31:31,0:31:1104:0:0:0,-9.33193,-88.2139	0/0:170:169,1:169:6033:1:36:0,-47.5768,-450.532	0/1:14:10,4:10:356:4:144:-9.0992,0,-20.4493	0/1:16:11,5:11:396:5:180:-11.7356,0,-22.697	0/1:25:18,7:18:644:7:252:-15.5032,0,-39.2227	0/0:43:43,0:43:1548:0:0:0,-12.9443,-118.516	0/1:21:11,10:11:388:10:352:-25.6966,0,-20.7308	0/0:4:4,0:4:140:0:0:0,-1.20412,-10.0485	0/0:159:159,0:159:5707:0:0:0,-47.8638,-391.657	0/1:21:12,9:12:432:9:324:-23.1842,0,-25.3185	0/1:23:12,11:12:432:11:396:-29.0591,0,-22.9009	0/1:40:14,26:14:492:26:932:-72.1577,0,-25.0821	0/1:57:36,21:36:1292:21:756:-51.2085,0,-79.0194	0/1:28:16,12:16:568:12:413:-29.069,0,-35.2124	0/0:27:27,0:27:968:0:0:0,-8.12781,-73.8203	0/1:50:27,23:27:968:23:824:-59.4318,0,-57.2805	0/1:25:5,20:5:180:20:716:-57.242,0,-5.21402	0/0:33:33,0:33:1168:0:0:0,-9.93399,-81.1706	0/0:29:29,0:29:1031:0:0:0,-8.72987,-70.9399	0/0:95:95,0:95:3366:0:0:0,-28.5978,-243.673	0/1:315:141,174:141:5028:174:6247:-467.497,0,-269.543	0/1:38:13,25:13:468:25:900:-69.8819,0,-23.0217	0/0:4:4,0:4:144:0:0:0,-1.20412,-10.8669	0/0:27:27,0:27:955:0:0:0,-8.12781,-73.7702
chr01	12120538	.	C	T	124298	PASS	AB=0.587992;ABP=182.237;AC=154;AF=0.819149;AN=188;AO=6061;CIGAR=1X;DP=7163;DPB=7163;DPRA=0;EPP=13164.3;EPPR=2387.29;GTI=2;LEN=1;MEANALT=1.03191;MQM=40.3293;MQMR=59.9399;NS=94;NUMALT=1;ODDS=5.43595;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=217220;QR=39195;RO=1098;RPL=0;RPP=13164.3;RPPR=2387.29;RPR=6061;RUN=1;SAF=0;SAP=13164.3;SAR=6061;SRF=0;SRP=2387.29;SRR=1098;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:42:0,42:0:0:42:1512:-128.45,-12.6433,0	0/1:81:31,50:31:1099:50:1792:-128.054,0,-74.836	1/1:94:0,94:0:0:94:3376:-286.416,-28.2968,0	1/1:125:0,125:0:0:125:4475:-388.981,-37.6288,0	1/1:41:0,41:0:0:41:1468:-125.663,-12.3422,0	1/1:52:0,52:0:0:52:1868:-158.812,-15.6536,0	0/1:88:36,52:36:1292:52:1872:-137.008,0,-90.0931	1/1:138:0,138:0:0:138:4941:-419.451,-41.5421,0	1/1:81:0,81:0:0:81:2904:-246.557,-24.3834,0	1/1:73:0,73:0:0:73:2628:-227.951,-21.9752,0	1/1:31:0,31:0:0:31:1116:-97.3118,-9.33193,0	1/1:36:0,36:0:0:36:1292:-109.84,-10.8371,0	0/1:36:14,22:14:500:22:792:-56.5762,0,-34.4991	1/1:63:0,63:0:0:63:2252:-195.123,-18.9649,0	0/1:44:15,29:15:536:29:1044:-78.6117,0,-35.3295	1/1:26:0,26:0:0:26:932:-80.6753,-7.82678,0	1/1:45:0,45:0:0:45:1597:-136.006,-13.5464,0	0/1:18:13,4:13:468:4:144:-7.25485,0,-36.9823	0/1:31:10,21:10:360:21:752:-54.7747,0,-23.4124	0/1:100:37,63:37:1324:63:2260:-168.186,0,-89.3587	0/1:117:58,59:58:2045:59:2104:-146.845,0,-149.1	0/1:48:33,15:33:1184:15:540:-32.2164,0,-92.4143	1/1:73:0,73:0:0:73:2620:-228.015,-21.9752,0	0/1:68:8,60:8:288:60:2144:-164.049,0,-5.79737	1/1:49:0,49:0:0:49:1756:-150.848,-14.7505,0	0/1:237:110,127:110:3948:127:4557:-325.626,0,-284.162	1/1:205:0,205:0:0:205:7355:-634.556,-61.7112,0	1/1:26:0,26:0:0:26:932:-80.8527,-7.82678,0	0/1:177:56,121:56:1985:121:4314:-322.51,0,-125.631	1/1:184:1,183:1:36:183:6571:-556.091,-51.7912,0	1/1:156:0,156:0:0:156:5599:-487.221,-46.9607,0	1/1:6:0,6:0:0:6:216:-18.9997,-1.80618,0	1/1:19:0,19:0:0:19:680:-59.1291,-5.71957,0	0/1:5:1,4:1:36:4:144:-11.029,0,-2.09312	1/1:11:0,11:0:0:11:396:-33.876,-3.31133,0	1/1:12:0,12:0:0:12:428:-36.6661,-3.61236,0	0/1:95:46,49:46:1639:49:1756:-124.709,0,-119.195	1/1:176:0,176:0:0:176:6287:-540.358,-52.9813,0	0/1:40:16,24:16:563:24:864:-61.4697,0,-38.958	0/1:6:3,3:3:108:3:108:-7.86639,0,-8.26899	0/1:112:40,72:40:1436:72:2580:-189.5,0,-95.8223	1/1:21:0,21:0:0:21:748:-64.6306,-6.32163,0	1/1:117:0,117:0:0:117:4196:-361.44,-35.2205,0	1/1:38:0,38:0:0:38:1355:-118.403,-11.4391,0	1/1:40:0,40:0:0:40:1428:-125.429,-12.0412,0	1/1:104:0,104:0:0:104:3728:-324.296,-31.3071,0	1/1:123:0,123:0:0:123:4416:-374.766,-37.0267,0	0/1:135:38,97:38:1356:97:3465:-261.162,0,-81.7014	0/1:97:39,58:39:1392:58:2080:-151.787,0,-96.3791	0/1:89:33,56:33:1184:56:1999:-147.78,0,-80.0766	1/1:156:0,156:0:0:156:5589:-486.235,-46.9607,0	1/1:15:0,15:0:0:15:540:-47.6367,-4.51545,0	1/1:169:0,169:0:0:169:6029:-511.854,-50.8741,0	1/1:31:0,31:0:0:31:1116:-97.6045,-9.33193,0	1/1:40:0,40:0:0:40:1436:-122.177,-12.0412,0	1/1:139:0,139:0:0:139:4988:-427.769,-41.8432,0	1/1:50:0,50:0:0:50:1792:-156.233,-15.0515,0	1/1:17:0,17:0:0:17:612:-53.6027,-5.11751,0	0/1:21:8,13:8:279:13:468:-34.7268,0,-19.1259	1/1:52:0,52:0:0:52:1863:-159.654,-15.6536,0	1/1:93:1,92:1:36:92:3296:-284.681,-24.3975,0	1/1:23:0,23:0:0:23:824:-72.545,-6.92369,0	1/1:183:0,183:0:0:183:6572:-571.897,-55.0885,0	1/1:189:0,189:0:0:189:6754:-590.286,-56.8947,0	1/1:50:0,50:0:0:50:1800:-155.798,-15.0515,0	1/1:80:0,80:0:0:80:2864:-249.474,-24.0824,0	1/1:154:2,152:2:72:152:5433:-466.158,-39.5219,0	1/1:83:0,83:0:0:83:2976:-260.213,-24.9855,0	1/1:14:0,14:0:0:14:504:-43.872,-4.21442,0	1/1:75:0,75:0:0:75:2688:-228.482,-22.5773,0	1/1:59:0,59:0:0:59:2120:-184.143,-17.7608,0	1/1:49:0,49:0:0:49:1756:-154.285,-14.7505,0	0/1:85:51,33:51:1803:33:1188:-75.3923,0,-136.993	0/1:43:23,20:23:820:20:720:-48.3713,0,-61.1782	0/1:125:32,93:32:1148:93:3327:-249.51,0,-65.9727	1/1:179:0,179:0:0:179:6420:-561.871,-53.8844,0	0/1:75:31,44:31:1116:44:1584:-112.101,0,-78.1744	1/1:92:0,92:0:0:92:3296:-280.055,-27.6948,0	1/1:13:0,13:0:0:13:468:-39.6714,-3.91339,0	0/1:92:23,69:23:824:69:2457:-184.937,0,-46.7886	0/1:59:26,33:26:916:33:1188:-83.1897,0,-64.9957	0/1:235:98,135:98:3505:135:4848:-354.141,0,-245.15	0/1:71:31,40:31:1093:40:1436:-103.871,0,-77.3045	0/1:31:12,19:12:432:19:684:-50.4741,0,-29.8893	1/1:49:0,49:0:0:49:1760:-154.084,-14.7505,0	0/1:56:31,25:31:1108:25:892:-61.6812,0,-83.1617	0/1:23:13,10:13:468:10:360:-23.9035,0,-35.536	1/1:50:0,50:0:0:50:1800:-152.841,-15.0515,0	1/1:48:0,48:0:0:48:1728:-147.063,-14.4494,0	1/1:24:0,24:0:0:24:864:-73.1161,-7.22472,0	0/1:88:54,34:54:1932:34:1224:-79.6783,0,-147.666	0/1:37:24,13:24:864:13:445:-26.3364,0,-66.9445	1/1:67:0,67:0:0:67:2404:-210.107,-20.169,0	1/1:48:0,48:0:0:48:1724:-151.443,-14.4494,0
chr01	12120569	.	G	A	122223	PASS	AB=0.580827;ABP=153.952;AC=154;AF=0.819149;AN=188;AO=5978;CIGAR=1X;DP=7098;DPB=7098;DPRA=0;EPP=12984.1;EPPR=2430.72;GTI=2;LEN=1;MEANALT=1.02128;MQM=40.2588;MQMR=59.9383;NS=94;NUMALT=1;ODDS=4.34386;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=213947;QR=39962;RO=1118;RPL=5978;RPP=12984.1;RPPR=2430.72;RPR=0;RUN=1;SAF=0;SAP=12984.1;SAR=5978;SRF=0;SRP=2430.72;SRR=1118;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:42:0,42:0:0:42:1495:-127.286,-12.6433,0	0/1:81:32,49:32:1143:49:1760:-125.244,0,-78.7953	1/1:93:0,93:0:0:93:3332:-282.854,-27.9958,0	1/1:124:0,124:0:0:124:4432:-385.145,-37.3277,0	1/1:41:0,41:0:0:41:1472:-125.92,-12.3422,0	1/1:52:0,52:0:0:52:1844:-156.992,-15.6536,0	0/1:90:38,52:38:1352:52:1868:-136.118,0,-94.8877	1/1:134:0,134:0:0:134:4785:-406.193,-40.338,0	1/1:78:0,78:0:0:78:2800:-237.635,-23.4803,0	1/1:71:0,71:0:0:71:2548:-221.069,-21.3731,0	1/1:32:0,32:0:0:32:1148:-100.154,-9.63296,0	1/1:35:0,35:0:0:35:1256:-106.791,-10.5361,0	0/1:37:15,22:15:540:22:784:-55.7598,0,-37.7984	1/1:62:0,62:0:0:62:2181:-189.192,-18.6639,0	0/1:43:14,29:14:504:29:1044:-78.8264,0,-32.7538	1/1:25:0,25:0:0:25:900:-77.8302,-7.52575,0	1/1:41:0,41:0:0:41:1467:-124.653,-12.3422,0	0/1:17:14,3:14:504:3:108:-4.36777,0,-40.5802	0/1:31:10,21:10:360:21:756:-55.0325,0,-23.4124	0/1:97:37,60:37:1328:60:2156:-159.855,0,-90.6222	0/1:119:61,58:61:2175:58:2080:-144.025,0,-160.193	0/1:47:33,14:33:1168:14:496:-29.0217,0,-91.2742	1/1:69:0,69:0:0:69:2457:-214.508,-20.7711,0	0/1:68:8,60:8:288:60:2144:-163.674,0,-5.79737	1/1:48:1,47:1:36:47:1680:-140.572,-10.8529,0	0/1:236:111,125:111:3988:125:4484:-319.489,0,-288.061	1/1:206:0,206:0:0:206:7383:-637.062,-62.0122,0	1/1:26:0,26:0:0:26:936:-81.1636,-7.82678,0	0/1:181:58,122:58:2080:122:4338:-323.251,0,-132.916	1/1:188:1,187:1:36:187:6665:-564.875,-52.9954,0	1/1:152:0,152:0:0:152:5441:-473.067,-45.7566,0	1/1:6:0,6:0:0:6:212:-18.7079,-1.80618,0	1/1:19:0,19:0:0:19:684:-59.4172,-5.71957,0	0/1:5:1,4:1:36:4:144:-11.029,0,-2.09312	1/1:11:0,11:0:0:11:392:-33.617,-3.31133,0	1/1:11:0,11:0:0:11:396:-33.876,-3.31133,0	0/1:96:47,49:47:1684:49:1741:-123.159,0,-122.944	1/1:171:0,171:0:0:171:6148:-526.29,-51.4761,0	0/1:40:16,24:16:572:24:864:-61.4697,0,-39.7722	0/1:6:3,3:3:108:3:108:-7.86639,0,-8.26899	0/1:112:39,73:39:1396:73:2612:-192.451,0,-92.2237	1/1:21:0,21:0:0:21:752:-64.9187,-6.32163,0	1/1:116:0,116:0:0:116:4160:-357.597,-34.9195,0	1/1:38:0,38:0:0:38:1364:-119.14,-11.4391,0	1/1:39:0,39:0:0:39:1396:-122.587,-11.7402,0	1/1:102:0,102:0:0:102:3644:-317.093,-30.7051,0	1/1:121:0,121:0:0:121:4310:-365.887,-36.4246,0	0/1:132:38,94:38:1364:94:3364:-253.324,0,-83.3248	0/1:95:38,57:38:1348:57:2044:-149.884,0,-93.0224	0/1:88:35,53:35:1252:53:1889:-138.625,0,-86.4944	1/1:155:0,155:0:0:155:5564:-484.051,-46.6597,0	1/1:15:0,15:0:0:15:540:-47.6367,-4.51545,0	1/1:166:0,166:0:0:166:5945:-504.624,-49.971,0	1/1:29:0,29:0:0:29:1044:-91.3393,-8.72987,0	1/1:39:0,39:0:0:39:1400:-118.938,-11.7402,0	1/1:138:0,138:0:0:138:4925:-422.445,-41.5421,0	1/1:49:0,49:0:0:49:1756:-153.081,-14.7505,0	1/1:17:0,17:0:0:17:608:-53.3018,-5.11751,0	0/1:21:8,13:8:288:13:468:-34.7268,0,-19.9458	1/1:50:0,50:0:0:50:1792:-153.441,-15.0515,0	1/1:93:1,92:1:36:92:3304:-285.081,-24.3975,0	1/1:23:0,23:0:0:23:828:-72.8561,-6.92369,0	1/1:180:0,180:0:0:180:6472:-563.098,-54.1854,0	1/1:190:0,190:0:0:190:6808:-594.818,-57.1957,0	1/1:51:0,51:0:0:51:1815:-157.346,-15.3525,0	1/1:81:0,81:0:0:81:2874:-250.512,-24.3834,0	1/1:153:2,151:2:72:151:5416:-465.763,-39.2209,0	1/1:84:0,84:0:0:84:3009:-263.006,-25.2865,0	1/1:13:0,13:0:0:13:468:-40.763,-3.91339,0	1/1:75:0,75:0:0:75:2665:-226.8,-22.5773,0	1/1:57:0,57:0:0:57:2052:-178.177,-17.1587,0	1/1:48:0,48:0:0:48:1720:-151.046,-14.4494,0	0/1:87:54,33:54:1931:33:1188:-74.7609,0,-147.848	0/1:43:24,19:24:852:19:684:-45.3224,0,-64.0561	0/1:118:31,87:31:1103:87:3114:-232.995,0,-64.0583	1/1:176:0,176:0:0:176:6297:-551.116,-52.9813,0	0/1:75:33,42:33:1179:42:1508:-105.556,0,-83.84	1/1:92:0,92:0:0:92:3297:-279.914,-27.6948,0	1/1:13:0,13:0:0:13:464:-39.4128,-3.91339,0	0/1:93:23,70:23:828:70:2470:-185.915,0,-46.8483	0/1:58:25,33:25:891:33:1184:-83.2335,0,-63.049	0/1:237:100,136:100:3558:136:4869:-355.23,0,-249.018	0/1:71:31,40:31:1108:40:1432:-103.56,0,-78.6579	0/1:31:12,19:12:432:19:680:-50.1627,0,-29.8893	1/1:47:0,47:0:0:47:1692:-148.089,-14.1484,0	0/1:56:31,25:31:1108:25:896:-61.9923,0,-83.1617	0/1:23:13,10:13:451:10:360:-23.9035,0,-33.9961	1/1:49:0,49:0:0:49:1752:-148.991,-14.7505,0	1/1:45:0,45:0:0:45:1616:-137.47,-13.5464,0	1/1:24:0,24:0:0:24:860:-72.8282,-7.22472,0	0/1:90:56,34:56:2003:34:1224:-79.0762,0,-153.45	0/1:36:24,12:24:860:12:432:-25.3611,0,-66.8848	1/1:65:0,65:0:0:65:2324:-203.182,-19.567,0	1/1:47:0,47:0:0:47:1667:-146.537,-14.1484,0
chr01	12175665	.	G	A	65946.7	PASS	AB=0.513786;ABP=12.1709;AC=33;AF=0.175532;AN=188;AO=2874;CIGAR=1X;DP=13579;DPB=13579;DPRA=1.31573;EPP=42.2872;EPPR=27.8753;GTI=3;LEN=1;MEANALT=1.08889;MQM=59.8278;MQMR=59.9809;NS=94;NUMALT=1;ODDS=0.712308;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102740;QR=382022;RO=10698;RPL=2864;RPP=6157.27;RPPR=23068.7;RPR=10;RUN=1;SAF=1313;SAP=49.4801;SAR=1561;SRF=5155;SRP=33.5676;SRR=5543;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.528	0/1:188:89,99:89:3170:99:3556:-263.641,0,-228.931	0/0:221:221,0:221:7899:0:0:0,-66.5276,-710.929	0/0:275:274,1:274:9777:1:36:0,-79.185,-876.281	0/0:70:70,0:70:2489:0:0:0,-21.0721,-224.262	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.044	0/1:150:74,76:74:2639:76:2720:-199.889,0,-192.602	0/0:244:244,0:244:8731:0:0:0,-73.4513,-785.78	0/0:179:179,0:179:6382:0:0:0,-53.8844,-574.471	0/0:160:160,0:160:5735:0:0:0,-48.1648,-516.265	0/0:102:102,0:102:3594:0:0:0,-30.7051,-323.668	0/0:176:175,1:175:6239:1:36:0,-49.383,-558.006	0/1:166:67,99:67:2392:99:3552:-269.907,0,-165.567	0/0:106:106,0:106:3795:0:0:0,-31.9092,-341.747	0/1:136:74,62:74:2655:62:2213:-158.4,0,-198.255	0/0:145:145,0:145:5187:0:0:0,-43.6493,-466.969	0/0:126:125,1:125:4476:1:36:0,-34.3315,-399.409	0/1:114:45,69:45:1616:69:2480:-189.136,0,-111.413	0/1:71:43,28:43:1536:28:1008:-69.6632,0,-117.16	0/1:206:114,92:114:4076:92:3287:-233.976,0,-305.015	0/1:233:102,131:102:3651:131:4644:-347.94,0,-258.654	0/1:67:24,43:24:856:43:1536:-118.364,0,-57.1921	0/0:128:127,1:127:4495:1:36:0,-34.9336,-401.123	0/0:130:121,9:121:4316:9:324:0,-9.62804,-359.112	0/0:122:122,0:122:4351:0:0:0,-36.7257,-391.754	0/1:405:175,230:175:6215:230:8240:-619.682,0,-437.535	0/0:356:356,0:356:12708:0:0:0,-107.167,-1143.54	0/0:100:100,0:100:3559:0:0:0,-30.103,-320.519	0/1:251:117,133:117:4169:133:4737:-350.87,0,-299.775	0/0:81:81,0:81:2900:0:0:0,-24.3834,-261.236	0/0:149:149,0:149:5271:0:0:0,-44.8535,-474.444	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:9:6,3:6:212:3:104:-6.99354,0,-16.7155	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/1:352:175,177:175:6254:177:6299:-461.041,0,-456.883	0/0:141:141,0:141:5047:0:0:0,-42.4452,-454.374	0/1:77:36,41:36:1296:41:1460:-108.512,0,-93.7646	0/1:5:3,2:3:108:2:72:-5.32673,0,-8.57002	0/1:172:83,89:83:2963:89:3151:-232.027,0,-215.126	0/0:61:61,0:61:2196:0:0:0,-18.3628,-197.905	0/0:252:252,0:252:8974:0:0:0,-75.8596,-807.646	0/0:172:172,0:172:6141:0:0:0,-51.7772,-552.789	0/0:153:152,1:152:5443:1:36:0,-42.4593,-486.4	0/0:114:114,0:114:4067:0:0:0,-34.3174,-366.217	0/0:198:198,0:198:7069:0:0:0,-59.6039,-636.271	0/1:249:133,116:133:4768:116:4119:-295.931,0,-353.95	0/1:152:68,84:68:2440:84:3011:-225.41,0,-174.098	0/1:241:124,116:124:4456:116:4152:-301.249,0,-328.602	0/0:155:155,0:155:5520:0:0:0,-46.6596,-496.927	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:186:186,0:186:6642:0:0:0,-55.9916,-597.859	0/0:46:46,0:46:1630:0:0:0,-13.8474,-146.987	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:206:206,0:206:7322:0:0:0,-62.0122,-659.036	0/0:84:83,1:83:2963:1:36:0,-21.6882,-263.305	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:16:7,9:7:252:9:320:-24.3259,0,-18.2125	0/0:119:119,0:119:4241:0:0:0,-35.8226,-381.87	0/0:182:181,1:181:6447:1:36:0,-51.1892,-576.452	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:181:180,1:180:6419:1:36:0,-50.8882,-574.199	0/0:237:236,0:236:8418:0:0:0,-71.0431,-757.264	0/0:85:85,0:85:3016:0:0:0,-25.5875,-271.67	0/0:146:146,0:146:5216:0:0:0,-43.9504,-469.58	0/0:255:255,0:255:9105:0:0:0,-76.7626,-819.395	0/0:190:190,0:190:6761:0:0:0,-57.1957,-608.567	0/0:62:62,0:62:2215:0:0:0,-18.6639,-199.614	0/0:108:104,4:104:3724:4:144:0,-19.1976,-322.047	0/0:144:143,1:143:5124:1:36:0,-39.75,-457.703	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.029	0/1:83:47,36:47:1676:36:1284:-90.8779,0,-126.142	0/1:155:75,80:75:2692:80:2872:-212.057,0,-195.865	0/1:321:163,157:163:5848:157:5614:-408.801,0,-429.892	0/0:244:244,0:244:8713:0:0:0,-73.4513,-784.162	0/1:169:87,82:87:3097:82:2938:-213.667,0,-228.083	0/0:187:187,0:187:6683:0:0:0,-56.2926,-601.548	0/0:22:22,0:22:783:0:0:0,-6.62266,-70.7929	0/1:220:128,92:128:4580:92:3304:-231.343,0,-346.139	0/1:178:80,98:80:2842:98:3505:-262.059,0,-202.435	0/1:261:132,129:132:4715:129:4621:-337.378,0,-345.941	0/1:121:65,56:65:2336:56:2007:-144.476,0,-174.075	0/1:164:78,86:78:2800:86:3079:-227.966,0,-202.871	0/0:158:158,0:158:5655:0:0:0,-47.5627,-509.069	0/1:280:144,136:144:5163:136:4880:-355.056,0,-380.521	0/1:71:39,32:39:1383:32:1144:-81.8918,0,-103.395	0/0:136:136,0:136:4871:0:0:0,-40.9401,-438.526	0/0:138:137,0:137:4928:0:0:0,-41.2411,-443.308	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/1:116:56,59:56:1987:59:2107:-154.895,0,-144.126	0/1:150:41,109:41:1451:109:3896:-305.668,0,-85.7307	0/0:194:193,1:193:6872:1:36:0,-54.8015,-614.953	0/0:238:237,0:237:8507:0:0:0,-71.3441,-765.266
chr01	12587927	.	TTAAA	GTAAG,TTAAG	210841	PASS	AB=0.505974,0.496936;ABP=3.52917,3.14336;AC=174,13;AF=0.925532,0.0691489;AN=188;AO=8830,837;CIGAR=1X3M1X,4M1X;DP=9721;DPB=9731;DPRA=0,1.59164;EPP=19177.1,1820.53;EPPR=79.0118;GTI=2;LEN=5,1;MEANALT=1.45745,2.36;MQM=59.5157,59.2318;MQMR=47.4857;NS=94;NUMALT=2;ODDS=1.89919;PAIRED=0,0;PAIREDR=0;PAO=31.5,10;PQA=1109,266;PQR=106;PRO=5.5;QA=309057,29515;QR=1236;RO=35;RPL=1,0;RPP=19168.4,1820.53;RPPR=79.0118;RPR=8829,837;RUN=1,1;SAF=1,0;SAP=19168.4,1820.53;SAR=8829,837;SRF=0;SRP=79.0118;SRR=35;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:78:0,78,0:0:0:78,0:2714,0:-244.491,-23.4803,0,-244.491,-23.4803,-244.491	1/1:63:0,62,0:0:0:62,0:2158,0:-194.123,-18.6639,0,-194.123,-18.6639,-194.123	1/1:176:0,176,0:0:0:176,0:6135,0:-552.206,-52.9813,0,-552.206,-52.9813,-552.206	1/1:280:0,279,0:0:0:279,0:9760,0:-877.891,-83.9874,0,-877.891,-83.9874,-877.891	1/1:89:1,86,0:1:31:86,0:3042,0:-270.902,-23.4551,0,-271.203,-25.8886,-273.645	1/1:9:0,9,0:0:0:9,0:314,0:-28.5972,-2.70927,0,-28.5972,-2.70927,-28.5972	1/1:73:0,73,0:0:0:73,0:2575,0:-231.992,-21.9752,0,-231.992,-21.9752,-231.992	1/1:231:0,230,0:0:0:230,0:8062,0:-725.17,-69.2369,0,-725.17,-69.2369,-725.17	1/1:97:0,96,0:0:0:96,0:3332,0:-299.638,-28.8989,0,-299.638,-28.8989,-299.638	1/1:68:0,68,0:0:0:68,0:2388,0:-215.154,-20.47,0,-215.154,-20.47,-215.154	1/1:43:0,43,0:0:0:43,0:1506,0:-135.748,-12.9443,0,-135.748,-12.9443,-135.748	1/1:120:1,119,0:1:36:119,0:4147,0:-370.013,-32.736,0,-370.314,-35.8226,-373.062	1/1:76:0,75,0:0:0:75,0:2607,0:-234.51,-22.5773,0,-234.51,-22.5773,-234.51	1/1:77:0,77,0:0:0:77,0:2730,0:-245.911,-23.1793,0,-245.911,-23.1793,-245.911	1/1:61:1,60,0:1:36:60,0:2110,0:-186.559,-15.1244,0,-186.86,-18.0618,-189.798	1/1:59:0,58,1:0:0:58,1:2047,36:-184.111,-17.4597,0,-181.174,-14.1625,-180.873	1/1:44:0,44,0:0:0:44,0:1545,0:-139.334,-13.2453,0,-139.334,-13.2453,-139.334	1/1:37:0,37,0:0:0:37,0:1296,0:-116.937,-11.1381,0,-116.937,-11.1381,-116.937	1/1:17:0,17,0:0:0:17,0:600,0:-54.3275,-5.11751,0,-54.3275,-5.11751,-54.3275	1/1:148:0,148,0:0:0:148,0:5152,0:-463.798,-44.5524,0,-463.798,-44.5524,-463.798	1/1:153:0,153,0:0:0:153,0:5344,0:-480.65,-46.0576,0,-480.65,-46.0576,-480.65	1/1:215:0,215,0:0:0:215,0:7521,0:-676.279,-64.7215,0,-676.279,-64.7215,-676.279	1/1:130:0,129,1:0:0:129,1:4488,36:-403.664,-38.8329,0,-400.726,-35.5356,-400.425	1/2:73:0,36,37:0:0:36,37:1265,1314:-209.781,-106.873,-96.0357,-103.203,0,-92.065	1/1:66:0,66,0:0:0:66,0:2317,0:-208.713,-19.868,0,-208.713,-19.868,-208.713	1/2:371:1,200,170:1:36:200,170:6966,5969:-1048.59,-482.604,-425.335,-563.343,0,-515.106	1/1:190:0,190,0:0:0:190,0:6729,0:-605.647,-57.1957,0,-605.647,-57.1957,-605.647	1/2:38:1,22,15:1:36:22,15:757,528:-101.304,-40.1373,-36.3223,-58.6628,0,-56.9554	1/1:422:0,421,1:0:0:421,1:14746,36:-1326.12,-126.734,0,-1323.19,-123.436,-1322.89	1/1:130:0,123,7:0:0:123,7:4322,237:-388.825,-37.0267,0,-369.612,-17.4748,-367.505	1/2:146:0,63,82:0:0:63,82:2191,2917:-415.813,-237.675,-218.71,-178.189,0,-153.504	1/2:14:0,8,6:0:0:8,6:282,212:-40.5789,-17.6186,-15.2104,-23.3131,0,-21.5069	1/1:54:0,54,0:0:0:54,0:1884,0:-169.8,-16.2556,0,-169.8,-16.2556,-169.8	1/1:6:0,6,0:0:0:6,0:201,0:-18.3684,-1.80618,0,-18.3684,-1.80618,-18.3684	1/1:19:0,19,0:0:0:19,0:664,0:-60.0837,-5.71957,0,-60.0837,-5.71957,-60.0837	1/1:6:0,6,0:0:0:6,0:213,0:-19.5164,-1.80618,0,-19.5164,-1.80618,-19.5164	1/1:189:4,185,0:4:137:185,0:6510,0:-573.274,-44.2847,0,-574.478,-55.6906,-585.543	1/1:188:0,186,2:0:0:186,2:6479,72:-582.252,-55.9916,0,-576.377,-50.1068,-575.775	1/1:49:1,48,0:1:36:48,0:1678,0:-147.7,-11.1522,0,-148.001,-14.4494,-150.938	1/1:7:0,7,0:0:0:7,0:247,0:-22.5538,-2.10721,0,-22.5538,-2.10721,-22.5538	1/2:99:0,48,51:0:0:48,51:1694,1806:-285.384,-147.459,-133.009,-138.279,0,-122.926	1/2:33:0,18,15:0:0:18,15:645,518:-95.026,-42.4251,-37.0066,-52.9519,0,-48.4364	1/1:270:0,269,1:0:0:269,1:9406,36:-846.067,-80.9771,0,-843.13,-78.0563,-842.829	1/1:55:3,52,0:3:105:52,0:1830,0:-155.374,-6.98632,0,-156.277,-15.6536,-164.602	1/1:61:1,60,0:1:36:60,0:2117,0:-187.269,-14.8601,0,-187.57,-18.0618,-190.422	1/1:162:0,162,0:0:0:162,0:5668,0:-510.17,-48.7669,0,-510.17,-48.7669,-510.17	1/1:144:0,144,0:0:0:144,0:5023,0:-452.199,-43.3483,0,-452.199,-43.3483,-452.199	1/2:304:0,148,154:0:0:148,154:5154,5440:-861.827,-442.82,-398.267,-419.068,0,-372.709	1/1:140:0,140,0:0:0:140,0:4906,0:-441.63,-42.1442,0,-441.63,-42.1442,-441.63	1/1:163:2,161,0:2:71:161,0:5653,0:-502.193,-42.5205,0,-502.795,-48.4658,-508.424	1/1:91:1,90,0:1:36:90,0:3160,0:-281.083,-23.8576,0,-281.384,-27.0927,-284.266	1/1:19:0,19,0:0:0:19,0:661,0:-59.8135,-5.71957,0,-59.8135,-5.71957,-59.8135	1/1:65:0,65,0:0:0:65,0:2276,0:-205.035,-19.567,0,-205.035,-19.567,-205.035	1/1:61:0,61,0:0:0:61,0:2148,0:-193.576,-18.3628,0,-193.576,-18.3628,-193.576	1/1:6:0,6,0:0:0:6,0:198,0:-18.1242,-1.80618,0,-18.1242,-1.80618,-18.1242	1/2:182:0,92,89:0:0:92,89:3215,3159:-518.498,-256.978,-229.283,-261.483,0,-234.692	1/1:59:0,57,1:0:0:57,1:2001,36:-180.023,-17.1587,0,-177.085,-14.17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chr01	12587942	.	CACAGGGGGAAAAC	CACAGGGGGGAAAAC,CACAGGAGGTAAAAC	201336	PASS	AB=0.473684,0.501273;ABP=17.182,3.04348;AC=167,21;AF=0.888298,0.111702;AN=188;AO=8255,1204;CIGAR=4M1I10M,6M1I2M1X5M;DP=9698;DPB=10386;DPRA=0,1.37994;EPP=17919.8,2617.46;EPPR=52.9542;GTI=1;LEN=1,15;MEANALT=3.30851,4.09677;MQM=59.7233,57.7525;MQMR=60;NS=94;NUMALT=2;ODDS=1.13471;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=286320,41633;QR=791;RO=23;RPL=1,0;RPP=17919.8,2617.46;RPPR=52.9542;RPR=8254,1204;RUN=1,1;SAF=0,0;SAP=17928.5,2617.46;SAR=8255,1204;SRF=0;SRP=52.9542;SRR=23;TYPE=ins,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:72:0,70,0:0:0:70,0:2411,0:-216.874,-21.0721,0,-216.874,-21.0721,-216.874	1/1:58:0,56,0:0:0:56,0:1905,0:-171.384,-16.8577,0,-171.384,-16.8577,-171.384	1/1:170:2,165,0:2:72:165,0:5726,0:-508.608,-43.7751,0,-509.21,-49.67,-515.085	1/1:265:1,260,0:1:33:260,0:9008,0:-807.343,-75.5964,0,-807.644,-78.2678,-810.313	1/1:83:0,81,0:0:0:81,0:2797,0:-251.595,-24.3834,0,-251.595,-24.3834,-251.595	1/1:10:0,10,0:0:0:10,0:327,0:-29.7456,-3.0103,0,-29.7456,-3.0103,-29.7456	1/1:68:0,66,0:0:0:66,0:2320,0:-208.753,-19.868,0,-208.753,-19.868,-208.753	1/1:222:0,216,0:0:0:216,0:7583,0:-682.067,-65.0225,0,-682.067,-65.0225,-682.067	1/1:90:0,85,0:0:0:85,0:2894,0:-260.333,-25.5876,0,-260.333,-25.5876,-260.333	1/1:62:0,61,0:0:0:61,0:2118,0:-190.525,-18.3628,0,-190.525,-18.3628,-190.525	1/1:40:0,40,0:0:0:40,0:1372,0:-123.744,-12.0412,0,-123.744,-12.0412,-123.744	1/1:115:0,111,0:0:0:111,0:3803,0:-342.185,-33.4143,0,-342.185,-33.4143,-342.185	1/1:77:0,75,0:0:0:75,0:2577,0:-231.858,-22.5773,0,-231.858,-22.5773,-231.858	1/1:79:0,76,0:0:0:76,0:2600,0:-233.891,-22.8783,0,-233.891,-22.8783,-233.891	1/1:62:0,61,0:0:0:61,0:2100,0:-188.89,-18.3628,0,-188.89,-18.3628,-188.89	1/1:57:1,55,1:1:28:55,1:1889,36:-167.422,-14.3779,0,-164.785,-13.5793,-166.702	1/1:44:0,42,1:0:0:42,1:1456,35:-131.006,-12.6433,0,-128.162,-9.7744,-127.861	1/1:36:0,36,0:0:0:36,0:1216,0:-109.727,-10.8371,0,-109.727,-10.8371,-109.727	1/1:17:0,17,0:0:0:17,0:600,0:-54.321,-5.11751,0,-54.321,-5.11751,-54.321	1/1:146:0,145,0:0:0:145,0:5006,0:-450.312,-43.6494,0,-450.312,-43.6494,-450.312	1/1:138:1,134,1:1:30:134,1:4630,35:-413.818,-37.941,0,-411.275,-37.479,-413.372	1/1:209:1,206,0:1:33:206,0:7186,0:-643.205,-59.3536,0,-643.506,-62.0122,-646.174	1/1:118:1,115,0:1:36:115,0:4005,0:-356.99,-31.6808,0,-357.291,-34.6185,-360.229	1/2:77:0,32,39:0:0:32,39:1124,1363:-202.35,-110.878,-101.245,-91.4761,0,-79.7359	1/1:65:0,65,0:0:0:65,0:2268,0:-204.364,-19.567,0,-204.364,-19.567,-204.364	1/2:370:0,190,175:0:0:190,175:6581,6040:-1025.34,-490.641,-433.446,-534.725,0,-482.045	1/1:182:1,176,0:1:36:176,0:6149,0:-549.942,-50.0365,0,-550.243,-52.9813,-553.18	1/2:39:0,21,14:0:0:21,14:705,489:-96.9166,-39.8129,-33.4912,-57.1331,0,-52.9187	1/1:409:1,403,1:1:36:403,1:14083,25:-1263.44,-118.374,0,-1261.79,-119.384,-1264.43	1/1:131:1,121,7:1:36:121,7:4193,245:-373.972,-33.4859,0,-354.339,-16.4863,-355.17	1/2:143:2,56,83:2:68:56,83:1972,2906:-390.816,-230.874,-219.532,-155.054,0,-135.584	1/2:15:0,8,7:0:0:8,7:280,241:-42.7023,-19.9181,-17.5099,-23.1311,0,-21.0239	1/1:50:0,49,0:0:0:49,0:1696,0:-152.6,-14.7505,0,-152.6,-14.7505,-152.6	1/2:13:0,6,7:0:0:6,7:204,240:-36.3425,-19.7963,-17.9901,-16.8872,0,-14.78	1/1:19:1,18,0:1:36:18,0:610,0:-51.6174,-2.1213,0,-51.9184,-5.41854,-54.857	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:181:0,176,0:0:0:176,0:6004,0:-540.071,-52.9813,0,-540.071,-52.9813,-540.071	1/1:176:0,171,2:0:0:171,2:5970,65:-537.059,-51.4761,0,-531.813,-46.2253,-531.211	1/1:48:0,47,0:0:0:47,0:1598,0:-143.742,-14.1484,0,-143.742,-14.1484,-143.742	1/1:6:0,5,0:0:0:5,0:180,0:-16.1731,-1.50515,0,-16.1731,-1.50515,-16.1731	1/2:104:1,43,59:1:36:43,59:1524,2034:-286.106,-162.255,-152.248,-121.205,0,-106.382	1/2:35:0,18,17:0:0:18,17:640,572:-98.8304,-46.6758,-41.2573,-52.5001,0,-47.3826	1/1:257:0,254,0:0:0:254,0:8851,0:-796.199,-76.4616,0,-796.199,-76.4616,-796.199	1/1:56:0,52,0:0:0:52,0:1745,0:-156.945,-15.6536,0,-156.945,-15.6536,-156.945	1/1:59:0,58,0:0:0:58,0:1996,0:-179.531,-17.4597,0,-179.531,-17.4597,-179.531	1/1:151:0,150,0:0:0:150,0:5200,0:-467.748,-45.1545,0,-467.748,-45.1545,-467.748	1/1:139:0,133,0:0:0:133,0:4547,0:-409.043,-40.037,0,-409.043,-40.037,-409.043	1/2:291:1,127,154:1:35:127,154:4416,5363:-791.742,-433.059,-397.676,-356.149,0,-312.638	1/1:140:0,136,0:0:0:136,0:4720,0:-424.571,-40.9401,0,-424.571,-40.9401,-424.571	1/1:154:0,150,0:0:0:150,0:5246,0:-471.843,-45.1545,0,-471.843,-45.1545,-471.843	1/1:85:1,81,0:1:35:81,0:2835,0:-251.892,-21.5343,0,-252.193,-24.3834,-255.041	1/1:17:0,17,0:0:0:17,0:595,0:-53.8767,-5.11751,0,-53.8767,-5.11751,-53.8767	1/2:107:0,59,47:0:0:59,47:2047,1629:-298.033,-131.648,-113.887,-166.371,0,-152.223	1/1:59:0,58,0:0:0:58,0:2005,0:-180.351,-17.4597,0,-180.351,-17.4597,-180.351	1/2:12:0,5,5:0:0:5,5:172,180:-28.6705,-14.7017,-13.1966,-13.9955,0,-12.4904	1/2:187:0,91,94:0:0:91,94:3169,3267:-523.244,-265.562,-238.168,-257.728,0,-229.431	1/1:58:0,56,0:0:0:56,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chr01	14229612	.	G	A	16128.4	PASS	AB=0.487695;ABP=5.62894;AC=32;AF=0.170213;AN=188;AO=977;CIGAR=1X;DP=5404;DPB=5404;DPRA=1.12434;EPP=2115.86;EPPR=9570.57;GTI=0;LEN=1;MEANALT=1;MQM=59.9918;MQMR=59.9995;NS=94;NUMALT=1;ODDS=4.77956;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34950;QR=157670;RO=4426;RPL=0;RPP=2124.54;RPPR=9587.91;RPR=977;RUN=1;SAF=1;SAP=2115.86;SAR=976;SRF=2;SRP=9596.58;SRR=4424;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:52:52,0:52:1848:0:0:0,-15.6536,-166.597	0/1:29:19,10:19:684:10:360:-24.0144,0,-53.1605	0/0:82:82,0:82:2935:0:0:0,-24.6845,-264.384	0/0:107:107,0:107:3820:0:0:0,-32.2102,-343.995	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/1:37:15,22:15:540:22:792:-60.4676,0,-37.7984	0/0:87:87,0:87:3088:0:0:0,-26.1896,-278.147	0/0:69:69,0:69:2431:0:0:0,-20.7711,-219.044	0/0:33:33,0:33:1156:0:0:0,-9.93399,-104.344	0/0:58:58,0:58:2070:0:0:0,-17.4597,-186.569	0/0:59:59,0:59:2097:0:0:0,-17.7608,-188.998	0/1:55:29,26:29:1031:26:936:-68.0028,0,-76.546	0/0:96:96,0:96:3428:0:0:0,-28.8989,-308.732	0/1:53:30,23:30:1039:23:824:-58.5287,0,-77.8611	0/0:44:44,0:44:1561:0:0:0,-13.2453,-140.78	0/0:36:36,0:36:1279:0:0:0,-10.8371,-115.412	0/1:27:10,17:10:360:17:612:-47.2856,0,-24.6165	0/1:40:18,22:18:644:22:792:-59.5645,0,-46.2494	0/1:51:20,31:20:716:31:1112:-85.0388,0,-49.4152	0/1:67:26,41:26:911:41:1467:-112.156,0,-62.136	0/1:72:34,38:34:1216:38:1355:-100.576,0,-88.0724	0/0:66:66,0:66:2320:0:0:0,-19.868,-209.059	0/0:38:37,1:37:1319:1:36:0,-7.84086,-115.413	0/0:43:43,0:43:1518:0:0:0,-12.9443,-136.912	0/1:104:66,38:66:2372:38:1356:-91.0334,0,-182.431	0/0:109:109,0:109:3871:0:0:0,-32.8123,-348.585	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:132:132,0:132:4723:0:0:0,-39.736,-425.228	0/0:74:74,0:74:2623:0:0:0,-22.2762,-236.315	0/0:62:61,1:61:2169:1:21:0,-16.5639,-193.375	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:19:19,0:19:671:0:0:0,-5.71957,-60.7158	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/0:15:15,0:15:531:0:0:0,-4.51545,-48.1219	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.229	0/1:123:55,68:55:1961:68:2448:-183.548,0,-139.737	0/0:80:80,0:80:2849:0:0:0,-24.0824,-256.647	0/1:54:26,28:26:936:28:991:-73.2479,0,-68.3038	0/1:7:2,5:2:72:5:176:-14.0778,0,-4.72951	0/1:87:37,50:37:1312:50:1787:-134.922,0,-92.1921	0/0:44:44,0:44:1575:0:0:0,-13.2453,-142.041	0/0:83:83,0:83:2936:0:0:0,-24.9855,-264.474	0/0:43:43,0:43:1518:0:0:0,-12.9443,-136.912	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/0:60:59,1:59:2112:1:36:0,-14.4635,-186.751	0/1:136:90,46:90:3214:46:1633:-106.317,0,-248.542	0/1:68:35,33:35:1247:33:1188:-86.7586,0,-92.064	0/1:76:45,31:45:1612:31:1112:-77.5131,0,-122.492	0/0:61:61,0:61:2171:0:0:0,-18.3628,-195.656	0/0:12:12,0:12:423:0:0:0,-3.61236,-38.4051	0/0:77:77,0:77:2732:0:0:0,-23.1793,-246.121	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:97:97,0:97:3437:0:0:0,-29.1999,-309.544	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:18:10,8:10:360:8:288:-20.8489,0,-27.3258	0/0:66:66,0:66:2355:0:0:0,-19.868,-212.208	0/0:82:80,2:80:2831:2:72:0,-17.8477,-248.191	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:108:108,0:108:3871:0:0:0,-32.5112,-348.584	0/0:157:157,0:157:5609:0:0:0,-47.2617,-504.931	0/0:47:46,1:46:1648:1:36:0,-10.5501,-145.01	0/0:51:51,0:51:1823:0:0:0,-15.3525,-164.35	0/0:97:97,0:97:3488:0:0:0,-29.1999,-314.13	0/0:77:76,0:76:2716:0:0:0,-22.8783,-244.324	0/0:50:50,0:50:1785:0:0:0,-15.0515,-160.931	0/0:35:35,0:35:1243:0:0:0,-10.536,-112.174	0/0:32:32,0:32:1126:0:0:0,-9.63296,-101.647	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:58:34,24:34:1216:24:849:-59.2681,0,-92.2868	0/1:45:29,16:29:1040:16:576:-38.6286,0,-80.368	0/1:78:45,33:45:1612:33:1175:-82.5766,0,-121.89	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.713	0/1:106:59,47:59:2097:47:1670:-118.677,0,-157.089	0/0:72:72,0:72:2584:0:0:0,-21.6742,-232.809	0/0:24:24,0:24:845:0:0:0,-7.22472,-76.3671	0/1:58:26,32:26:932:32:1148:-86.1701,0,-66.7391	0/1:54:16,38:16:572:38:1348:-105.362,0,-35.5578	0/1:64:44,20:44:1580:20:720:-45.8629,0,-123.226	0/1:40:23,17:23:824:17:608:-43.0108,0,-62.4421	0/1:58:31,27:31:1077:27:972:-70.3382,0,-79.7738	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:66:28,38:28:981:38:1364:-103.193,0,-68.7331	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/0:40:40,0:40:1406:0:0:0,-12.0412,-126.836	0/0:60:60,0:60:2135:0:0:0,-18.0618,-192.418	0/0:48:48,0:48:1701:0:0:0,-14.4494,-153.374	0/1:188:93,95:93:3306:95:3398:-249.44,0,-241.166	0/1:57:18,39:18:621:39:1404:-109.501,0,-39.0523	0/0:76:76,0:76:2717:0:0:0,-22.8783,-244.772	0/0:64:64,0:64:2287:0:0:0,-19.2659,-206.091
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chr01	14835127	.	T	C	36829.7	PASS	AB=0.490213;ABP=6.79307;AC=41;AF=0.218085;AN=188;AO=2240;CIGAR=1X;DP=9768;DPB=9768;DPRA=1.32954;EPP=4841.09;EPPR=16224.1;GTI=0;LEN=1;MEANALT=1.02222;MQM=59.9719;MQMR=59.9924;NS=94;NUMALT=1;ODDS=5.82112;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79287;QR=266967;RO=7526;RPL=3;RPP=4841.09;RPPR=16224.1;RPR=2237;RUN=1;SAF=0;SAP=4867.11;SAR=2240;SRF=0;SRP=16345.5;SRR=7526;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:74:39,35:39:1404:35:1260:-91.4293,0,-104.383	0/0:138:138,0:138:4897:0:0:0,-41.5421,-440.885	0/0:370:369,1:369:13080:1:36:0,-107.783,-1173.42	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/0:30:30,0:30:1056:0:0:0,-9.0309,-95.3509	0/1:86:48,38:48:1686:38:1349:-95.8206,0,-126.129	0/0:123:123,0:123:4387:0:0:0,-37.0267,-395.004	0/1:65:43,22:43:1527:22:783:-51.226,0,-118.155	0/0:90:90,0:90:3207:0:0:0,-27.0927,-288.853	0/0:81:81,0:81:2839:0:0:0,-24.3834,-255.749	0/0:87:87,0:87:3074:0:0:0,-26.1896,-276.89	0/1:87:38,49:38:1333:49:1721:-128.981,0,-94.0782	0/0:58:58,0:58:2041:0:0:0,-17.4597,-183.96	0/1:72:50,22:50:1757:22:771:-48.0361,0,-136.737	0/0:53:53,0:53:1876:0:0:0,-15.9546,-169.119	0/0:25:25,0:25:887:0:0:0,-7.52575,-80.1481	0/1:35:20,15:20:690:15:517:-36.3186,0,-51.8833	0/0:27:27,0:27:956:0:0:0,-8.12781,-86.3557	0/0:242:242,0:242:8643:0:0:0,-72.8493,-777.867	0/1:217:129,88:129:4557:88:3102:-214.083,0,-344.977	0/1:126:43,83:43:1518:83:2913:-224.475,0,-98.9818	0/0:135:135,0:135:4785:0:0:0,-40.639,-430.807	0/1:61:25,36:25:879:36:1274:-96.5987,0,-61.064	0/0:73:73,0:73:2585:0:0:0,-21.9752,-232.898	0/1:267:133,134:133:4708:134:4758:-348.003,0,-343.508	0/1:251:127,124:127:4478:124:4408:-321.334,0,-327.634	0/0:27:27,0:27:951:0:0:0,-8.12781,-85.9043	0/0:317:317,0:317:11330:0:0:0,-95.4265,-1019.58	0/0:167:167,0:167:5930:0:0:0,-50.272,-533.813	0/1:118:71,47:71:2525:47:1673:-115.334,0,-191.979	0/0:8:8,0:8:279:0:0:0,-2.40824,-25.4475	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.102	0/1:8:3,5:3:99:5:180:-14.1438,0,-6.82834	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:85:85,0:85:2995:0:0:0,-25.5875,-269.782	0/1:208:108,100:108:3848:100:3528:-255.116,0,-283.901	0/1:160:76,84:76:2707:84:2972:-219.549,0,-195.709	0/1:46:23,23:23:816:23:819:-60.185,0,-59.9143	0/1:7:4,3:4:135:3:108:-7.96796,0,-10.3753	0/1:139:80,59:80:2855:59:2107:-148.055,0,-215.344	0/0:42:42,0:42:1448:0:0:0,-12.6433,-130.611	0/0:151:150,0:150:5325:0:0:0,-45.1545,-479.109	0/0:63:63,0:63:2226:0:0:0,-18.9649,-200.604	0/0:51:51,0:51:1768:0:0:0,-15.3525,-159.4	0/0:100:100,0:100:3551:0:0:0,-30.103,-319.781	0/0:121:121,0:121:4323:0:0:0,-36.4246,-389.246	0/1:239:91,148:91:3227:148:5231:-398.896,0,-218.708	0/1:107:67,40:67:2347:40:1419:-95.7964,0,-179.278	0/1:112:56,56:56:2004:56:1964:-143.318,0,-146.918	0/0:131:131,0:131:4667:0:0:0,-39.4349,-420.193	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:155:155,0:155:5508:0:0:0,-46.6596,-495.851	0/0:95:95,0:95:3368:0:0:0,-28.5978,-303.339	0/0:13:13,0:13:456:0:0:0,-3.91339,-41.3732	0/0:205:205,0:205:7296:0:0:0,-61.7111,-656.694	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/1:20:11,9:11:396:9:324:-23.4853,0,-29.9621	0/0:91:90,1:90:3207:1:36:0,-23.7955,-285.255	0/0:86:86,0:86:3071:0:0:0,-25.8886,-276.618	0/0:18:18,0:18:635:0:0:0,-5.41854,-57.477	0/0:250:250,0:250:8874:0:0:0,-75.2575,-798.652	0/1:161:70,91:70:2495:91:3221:-241.647,0,-176.337	0/1:72:46,26:46:1610:26:928:-62.1641,0,-123.514	0/0:110:110,0:110:3907:0:0:0,-33.1133,-351.826	0/0:188:180,8:180:6424:8:284:0,-30.6903,-552.347	0/0:174:173,1:173:6167:1:36:0,-48.7809,-551.531	0/0:51:51,0:51:1799:0:0:0,-15.3525,-162.191	0/0:74:74,0:74:2611:0:0:0,-22.2762,-235.239	0/1:37:24,13:24:852:13:460:-30.5973,0,-65.8623	0/1:60:34,26:34:1208:26:913:-64.4217,0,-90.9643	0/1:135:78,57:78:2768:57:2016:-141.073,0,-208.721	0/1:113:52,61:52:1847:61:2128:-157.757,0,-132.493	0/1:118:58,60:58:2058:60:2113:-154.916,0,-149.969	0/1:268:140,128:140:4986:128:4608:-334.205,0,-368.214	0/1:95:66,28:66:2325:28:981:-59.9447,0,-180.853	0/1:105:52,53:52:1822:53:1883:-138.14,0,-132.652	0/0:40:40,0:40:1424:0:0:0,-12.0412,-128.457	0/0:132:132,0:132:4675:0:0:0,-39.736,-420.913	0/1:88:32,56:32:1131:56:1966:-150.721,0,-75.6071	0/1:208:106,102:106:3770:102:3649:-265.998,0,-276.886	0/1:80:47,33:47:1660:33:1155:-80.1732,0,-125.605	0/1:72:31,41:31:1100:41:1451:-109.211,0,-77.6361	0/1:48:26,22:26:911:22:774:-55.5305,0,-67.8555	0/1:155:65,90:65:2269:90:3196:-241.203,0,-157.813	0/1:21:7,14:7:248:14:491:-38.1995,0,-16.3426	0/0:76:76,0:76:2695:0:0:0,-22.8783,-242.795	0/0:68:68,0:68:2386:0:0:0,-20.47,-214.995	0/0:57:57,0:57:2026:0:0:0,-17.1587,-182.611	0/1:132:79,53:79:2774:53:1861:-128.031,0,-210.167	0/1:74:19,55:19:680:55:1920:-150.796,0,-39.2529	0/0:238:238,0:238:8492:0:0:0,-71.6451,-764.282	0/0:109:109,0:109:3818:0:0:0,-32.8123,-343.821
chr01	15961248	.	T	A	480162	PASS	AB=0.543166;ABP=182.419;AC=147;AF=0.781915;AN=188;AO=17694;CIGAR=1X;DP=22810;DPB=22810;DPRA=0;EPP=38399;EPPR=11029.8;GTI=0;LEN=1;MEANALT=1.17021;MQM=59.9929;MQMR=59.9996;NS=94;NUMALT=1;ODDS=12.7212;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=632454;QR=179254;RO=5094;RPL=9677;RPP=341.188;RPPR=204.788;RPR=8017;RUN=1;SAF=9674;SAP=338.747;SAR=8020;SRF=2887;SRP=200.122;SRR=2207;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:128:1,127:1:36:127:4538:-404.988,-34.9336,0	0/1:375:169,206:169:5938:206:7356:-549.201,0,-421.644	1/1:298:0,295:0:0:295:10564:-950.339,-88.8039,0	1/1:611:3,608:3:108:608:21723:-1944.44,-173.854,0	1/1:209:0,209:0:0:209:7471:-672.434,-62.9153,0	1/1:214:1,213:1:36:213:7644:-684.395,-60.8221,0	0/1:362:160,202:160:5670:202:7211:-540.072,0,-401.45	1/1:363:0,363:0:0:363:12984:-1168.37,-109.274,0	0/1:286:128,157:128:4501:157:5619:-419.678,0,-319.109	1/1:278:0,278:0:0:278:9936:-894.181,-83.6863,0	1/1:176:0,175:0:0:175:6258:-562.953,-52.6803,0	1/1:189:0,188:0:0:188:6705:-603.165,-56.5936,0	0/1:188:91,97:91:3186:97:3476:-256.458,0,-230.369	1/1:225:1,224:1:36:224:8017:-717.949,-64.1335,0	0/1:179:79,100:79:2790:100:3552:-266.002,0,-197.455	1/1:188:0,188:0:0:188:6711:-604.065,-56.5936,0	1/1:187:0,187:0:0:187:6679:-601.186,-56.2926,0	0/1:156:70,86:70:2433:86:3072:-229.748,0,-172.264	0/1:136:68,67:68:2368:67:2404:-175.618,0,-172.374	0/1:335:135,200:135:4743:200:7160:-543.61,0,-326.185	0/1:409:201,208:201:7084:208:7416:-544.358,0,-514.504	0/1:138:79,59:79:2746:59:2120:-149.526,0,-205.836	1/1:212:0,212:0:0:212:7573:-681.61,-63.8184,0	1/1:296:14,282:14:489:282:10097:-864.321,-44.766,0	1/1:182:0,182:0:0:182:6505:-585.534,-54.7875,0	0/1:712:298,414:298:10518:414:14785:-1116.05,0,-732.211	0/1:496:192,304:192:6707:304:10878:-829.609,0,-454.399	1/1:94:0,94:0:0:94:3372:-303.695,-28.2968,0	1/1:753:2,750:2:72:750:26779:-2402.5,-219.898,0	1/1:311:0,311:0:0:311:11091:-998.075,-93.6203,0	0/1:294:125,169:125:4422:169:6035:-454.749,0,-309.651	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	0/1:17:7,10:7:252:10:352:-26.9007,0,-17.9114	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:29:0,28:0:0:28:1008:-90.6765,-8.42884,0	0/1:519:240,279:240:8483:279:9982:-742.064,0,-607.244	0/1:330:138,192:138:4890:192:6858:-517.946,0,-340.912	0/1:179:82,97:82:2887:97:3473:-258.896,0,-206.182	0/1:14:6,8:6:216:8:284:-21.6889,0,-15.5761	0/1:364:155,209:155:5416:209:7432:-559.307,0,-377.996	1/1:116:0,116:0:0:116:4127:-371.616,-34.9195,0	1/1:380:1,379:1:21:379:13541:-1216.38,-112.291,0	1/1:239:0,239:0:0:239:8521:-766.891,-71.9462,0	1/1:151:0,151:0:0:151:5341:-480.824,-45.4555,0	1/1:299:0,299:0:0:299:10687:-961.739,-90.008,0	1/1:252:0,252:0:0:252:8965:-806.831,-75.8596,0	0/1:357:145,212:145:5056:212:7581:-574.86,0,-347.721	0/1:274:152,122:152:5338:122:4379:-311.8,0,-398.069	0/1:375:195,180:195:6854:180:6445:-467.249,0,-504.046	1/1:321:0,320:0:0:320:11444:-1029.63,-96.3296,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:366:0,366:0:0:366:13098:-1178.63,-110.177,0	1/1:136:0,136:0:0:136:4883:-439.621,-40.9401,0	1/1:65:0,65:0:0:65:2295:-206.808,-19.567,0	1/1:297:0,297:0:0:297:10541:-948.609,-89.4059,0	1/1:221:4,217:4:144:217:7751:-684.308,-53.214,0	1/1:21:0,21:0:0:21:735:-66.4714,-6.32163,0	0/1:18:8,10:8:280:10:360:-27.3258,0,-20.1208	1/1:230:1,229:1:36:229:8201:-734.503,-65.6386,0	1/1:269:0,268:0:0:268:9583:-862.212,-80.676,0	1/1:16:0,16:0:0:16:557:-50.4556,-4.81648,0	1/1:478:0,478:0:0:478:17120:-1540.43,-143.892,0	1/1:415:2,413:2:72:413:14745:-1319.95,-118.091,0	0/1:176:68,108:68:2347:108:3851:-293.805,0,-158.503	1/1:177:1,176:1:36:176:6311:-564.477,-49.684,0	1/1:358:5,351:5:180:351:12562:-1113.86,-90.9744,0	1/1:196:2,194:2:72:194:6947:-618.457,-52.1652,0	1/1:97:1,96:1:36:96:3430:-305.314,-25.6016,0	1/1:194:1,193:1:36:193:6932:-620.345,-54.8015,0	0/1:224:105,119:105:3669:119:4232:-313.628,0,-262.984	0/1:62:27,35:27:941:35:1241:-93.3286,0,-66.3378	0/1:284:114,168:114:4022:168:5990:-453.957,0,-276.918	0/1:101:50,49:50:1749:49:1741:-126.811,0,-127.528	0/1:422:186,236:186:6524:236:8453:-633.735,0,-460.216	0/1:402:202,199:202:7183:199:7106:-518.524,0,-525.454	0/1:268:107,159:107:3791:159:5655:-428.636,0,-260.955	0/1:271:117,154:117:4168:154:5519:-415.245,0,-293.723	1/1:29:0,29:0:0:29:1035:-93.4631,-8.72987,0	1/1:294:1,293:1:36:293:10490:-940.414,-84.9045,0	0/1:289:122,167:122:4267:167:5973:-450.678,0,-297.213	0/1:507:245,262:245:8732:262:9400:-693.337,0,-633.251	0/1:285:150,135:150:5226:135:4844:-350.319,0,-384.688	0/1:180:90,90:90:3157:90:3240:-237.635,0,-230.17	0/1:247:121,126:121:4295:126:4486:-329.538,0,-312.373	0/1:358:162,194:162:5718:194:6948:-517.898,0,-407.254	0/1:92:34,58:34:1184:58:2079:-159.685,0,-79.1671	1/1:203:0,203:0:0:203:7266:-653.991,-61.1091,0	1/1:176:0,176:0:0:176:6302:-567.271,-52.9813,0	1/1:193:0,193:0:0:193:6927:-623.489,-58.0988,0	0/1:229:118,111:118:4131:111:3968:-288.373,0,-303.039	0/1:175:112,63:112:3926:63:2268:-151.702,0,-300.854	1/1:229:0,229:0:0:229:8212:-739.09,-68.9359,0	1/1: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chr01	15966864	.	G	A	46936.8	PASS	AB=0.289507;ABP=5134.18;AC=82;AF=0.43617;AN=188;AO=3934;CIGAR=1X;DP=14366;DPB=14366;DPRA=6.90139;EPP=8545.58;EPPR=22616.7;GTI=16;LEN=1;MEANALT=1.14607;MQM=59.5267;MQMR=59.9726;NS=94;NUMALT=1;ODDS=1.418;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=140798;QR=372606;RO=10414;RPL=3934;RPP=8545.58;RPPR=22616.7;RPR=0;RUN=1;SAF=0;SAP=8545.58;SAR=3934;SRF=10414;SRP=22616.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:82:75,7:75:2684:7:248:0,-2.02026,-219.141	0/1:122:80,42:80:2872:42:1504:-98.9143,0,-221.991	0/1:182:142,40:142:5084:40:1436:-74.714,0,-402.916	0/1:308:255,53:255:9137:53:1888:-77.44,0,-729.578	0/1:103:69,34:69:2464:34:1208:-77.9303,0,-191.008	0/1:55:35,20:35:1226:20:716:-48.1571,0,-94.0831	0/1:142:99,43:99:3532:43:1536:-95.7809,0,-275.344	0/1:238:187,51:187:6700:51:1820:-92.0282,0,-531.419	0/1:172:137,34:137:4924:34:1212:-57.5505,0,-391.472	0/1:126:80,46:80:2852:46:1640:-109.929,0,-218.989	0/1:58:31,26:31:1108:26:928:-66.3061,0,-82.5125	0/1:120:72,48:72:2588:48:1716:-118.495,0,-197.045	0/1:134:76,58:76:2728:58:2080:-147.096,0,-205.425	0/1:93:34,59:34:1224:59:2108:-161.944,0,-82.4713	0/1:123:53,70:53:1881:70:2516:-189.41,0,-132.54	0/1:101:49,52:49:1764:52:1872:-138.274,0,-128.64	0/1:94:21,71:21:756:71:2548:-201.479,0,-40.3126	0/1:86:23,63:23:824:63:2260:-177.702,0,-48.5947	0/1:59:29,30:29:1040:30:1072:-78.9595,0,-76.1536	0/1:235:168,67:168:6005:67:2400:-145.514,0,-469.812	0/1:256:211,45:211:7538:45:1612:-68.284,0,-601.395	0/1:136:115,21:115:4128:21:756:-27.4271,0,-330.763	0/1:271:238,33:238:8517:33:1176:-24.5549,0,-684.944	0/1:108:70,38:70:2500:38:1356:-89.8292,0,-192.742	0/1:93:69,24:69:2472:24:852:-48.9597,0,-194.738	0/1:416:342,74:342:12170:74:2644:-112.97,0,-969.915	0/1:340:294,46:294:10521:46:1648:-46.1008,0,-844.454	0/1:34:9,25:9:324:25:900:-71.086,0,-19.2708	0/1:302:243,59:243:8689:59:2112:-99.4135,0,-690.852	0/1:177:140,37:140:5013:37:1316:-65.4371,0,-397.979	0/1:271:237,34:237:8465:34:1216:-28.0976,0,-680.274	0/1:30:26,4:26:928:4:144:-4.28272,0,-74.8074	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:25:24,1:24:864:1:36:0,-3.92747,-74.4843	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/1:280:109,169:109:3916:169:6064:-461.81,0,-268.605	0/1:248:212,36:212:7570:36:1288:-41.2278,0,-606.683	0/1:97:40,57:40:1440:57:2036:-154.048,0,-100.698	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:170:125,45:125:4481:45:1620:-94.9149,0,-352.282	0/1:54:19,35:19:684:35:1244:-95.9193,0,-45.6347	0/1:197:168,29:168:6009:29:1028:-33.3714,0,-481.582	0/1:125:37,86:37:1328:86:3064:-238.525,0,-82.4358	0/1:101:40,61:40:1420:61:2196:-167.474,0,-97.69	0/1:189:168,21:168:6006:21:744:-10.3601,0,-483.748	0/1:209:161,48:161:5772:48:1712:-91.3423,0,-456.679	0/1:314:250,64:250:8945:64:2300:-112.696,0,-710.504	0/1:125:97,28:97:3450:28:988:-51.6052,0,-273.082	0/1:316:241,74:241:8588:74:2656:-143.958,0,-677.73	0/1:135:110,25:110:3933:25:896:-40.3131,0,-313.522	0/0:16:15,1:15:540:1:36:0,-1.2182,-45.3383	0/1:221:173,48:173:6212:48:1724:-88.9166,0,-492.646	0/1:88:61,27:61:2188:27:960:-60.2093,0,-170.642	0/0:35:32,3:32:1144:3:108:0,-0.46088,-92.4924	0/1:227:198,29:198:7081:29:1028:-24.4988,0,-569.013	0/1:123:108,15:108:3869:15:536:-11.532,0,-311.376	0/0:16:15,1:15:517:1:36:0,-1.2182,-43.2563	0/1:21:19,2:19:684:2:72:-0.515093,0,-55.5687	0/1:153:123,30:123:4416:30:1068:-50.3699,0,-351.551	0/1:125:59,65:59:2120:65:2328:-172.073,0,-153.381	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:349:273,76:273:9808:76:2701:-138.189,0,-777.597	0/1:283:217,66:217:7753:66:2360:-127.418,0,-612.61	0/1:104:56,48:56:1993:48:1689:-120.978,0,-148.335	0/1:105:82,23:82:2948:23:828:-43.2084,0,-233.94	0/0:675:619,56:619:22151:56:2004:0,-22.5951,-1812.4	0/1:254:226,28:226:8062:28:1008:-14.5747,0,-648.361	0/1:42:19,22:19:680:22:792:-58.7947,0,-48.8272	0/1:95:67,28:67:2381:28:1008:-62.2944,0,-185.945	0/1:106:29,76:29:1044:76:2716:-212.704,0,-62.3068	0/1:32:25,7:25:896:7:252:-13.396,0,-71.3274	0/1:170:143,27:143:5098:27:960:-35.5052,0,-407.787	0/1:154:112,42:112:3990:42:1504:-89.117,0,-312.929	0/1:263:229,34:229:8190:34:1208:-29.8552,0,-657.934	0/1:269:223,46:223:7973:46:1656:-68.3376,0,-636.615	0/1:150:91,59:91:3268:59:2116:-145.482,0,-249.185	0/1:192:141,51:141:5048:51:1824:-106.608,0,-396.668	0/0:68:63,5:63:2252:5:180:0,-3.91797,-186.391	0/1:246:166,80:166:5936:80:2876:-184.976,0,-460.29	0/1:170:139,31:139:4973:31:1116:-49.5758,0,-396.542	0/1:352:275,77:275:9808:77:2768:-143.379,0,-776.7	0/1:90:47,43:47:1688:43:1540:-111.787,0,-125.114	0/1:120:61,59:61:2188:59:2116:-154.344,0,-161.062	0/1:124:31,93:31:1116:93:3336:-263.129,0,-63.424	0/1:191:88,103:88:3160:103:3688:-274.555,0,-227.123	0/1:51:15,35:15:540:35:1248:-97.1779,0,-33.5253	0/1:119:46,71:46:1639:71:2548:-193.918,0,-112.218	0/1:92:39,53:39:1400:53:1900:-143.574,0,-98.6044	0/1:56:28,28:28:1000:28:1004:-73.8148,0,-73.4577	0/1:101:72,28:72:2584:28:1008:-60.5511,0,-202.346	0/1:134:72,62:72:2584:62:2220:-159.443,0,-192.471	0/1:278:239,39:239:8580:39:1400:-42.556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chr01	15966918	.	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chr01	16258394	.	C	T	26987.7	PASS	AB=0.419172;ABP=242.766;AC=37;AF=0.196809;AN=188;AO=1785;CIGAR=1X;DP=10254;DPB=10254;DPRA=1.11731;EPP=3879.09;EPPR=18388.9;GTI=1;LEN=1;MEANALT=1.02326;MQM=53.6291;MQMR=58.3394;NS=94;NUMALT=1;ODDS=6.6344;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63231;QR=302027;RO=8467;RPL=1785;RPP=3879.09;RPPR=11144.1;RPR=0;RUN=1;SAF=0;SAP=3879.09;SAR=1785;SRF=938;SRP=11144.1;SRR=7529;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:75:75,0:75:2684:0:0:0,-22.5772,-241.658	0/1:113:63,50:63:2234:50:1742:-122.12,0,-166.93	0/0:228:228,0:228:8071:0:0:0,-68.6348,-725.271	0/0:268:268,0:268:9532:0:0:0,-80.676,-857.618	0/0:55:55,0:55:1980:0:0:0,-16.5566,-178.289	0/0:30:30,0:30:1061:0:0:0,-9.0309,-95.5762	0/1:59:35,24:35:1241:24:848:-58.3482,0,-94.2317	0/0:177:174,3:174:6145:3:108:0,-43.2325,-542.096	0/1:119:81,38:81:2863:38:1348:-85.338,0,-221.852	0/0:116:116,0:116:4156:0:0:0,-34.9195,-374.178	0/0:66:66,0:66:2357:0:0:0,-19.868,-212.373	0/0:138:138,0:138:4924:0:0:0,-41.5421,-443.125	0/1:126:73,53:73:2613:53:1872:-130.413,0,-197.417	0/0:95:95,0:95:3401:0:0:0,-28.5978,-306.28	0/1:106:64,42:64:2285:42:1512:-104.051,0,-173.973	0/0:75:75,0:75:2675:0:0:0,-22.5772,-240.946	0/0:50:49,1:49:1721:1:36:0,-11.4623,-151.527	0/1:73:33,40:33:1184:40:1416:-105.194,0,-84.5398	0/1:45:29,16:29:1040:16:576:-37.9493,0,-80.324	0/1:160:94,66:94:3364:66:2344:-162.317,0,-254.775	0/1:199:117,82:117:4151:82:2906:-200.945,0,-313.8	0/1:66:46,20:46:1641:20:708:-44.1596,0,-128.109	0/0:114:114,0:114:4073:0:0:0,-34.3174,-366.735	0/0:55:54,1:54:1929:1:36:0,-12.9635,-170.271	0/0:141:141,0:141:5053:0:0:0,-42.4452,-454.618	0/1:224:142,81:142:5077:81:2872:-190.39,0,-389.542	0/1:282:196,86:196:7006:86:3003:-184.542,0,-544.949	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/0:327:326,0:326:11620:0:0:0,-98.1358,-1044.58	0/0:77:77,0:77:2749:0:0:0,-23.1793,-247.601	0/0:111:111,0:111:3939:0:0:0,-33.4143,-354.644	0/0:36:36,0:36:1288:0:0:0,-10.8371,-114.824	0/0:58:58,0:58:2073:0:0:0,-17.4597,-183.151	0/0:92:92,0:92:3296:0:0:0,-27.6948,-292.205	0/0:107:107,0:107:3833:0:0:0,-32.2102,-340.544	0/0:61:61,0:61:2184:0:0:0,-18.3628,-193.825	0/1:251:131,120:131:4619:120:4281:-309.121,0,-340.257	0/1:81:59,22:59:2097:22:784:-46.279,0,-163.813	0/1:57:36,21:36:1284:21:752:-50.6465,0,-98.593	0/0:33:33,0:33:1184:0:0:0,-9.93399,-105.886	0/1:126:61,65:61:2169:65:2296:-168.465,0,-157.439	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.235	0/0:191:191,0:191:6777:0:0:0,-57.4967,-609.546	0/0:77:77,0:77:2756:0:0:0,-23.1793,-248.274	0/0:96:96,0:96:3395:0:0:0,-28.8989,-305.746	0/0:168:168,0:168:5993:0:0:0,-50.573,-539.437	0/0:124:124,0:124:4379:0:0:0,-37.3277,-393.064	0/1:134:76,58:76:2713:58:2057:-144.505,0,-203.622	0/1:129:70,59:70:2508:59:2101:-150.068,0,-187.06	0/1:121:64,57:64:2300:57:1997:-143.367,0,-170.676	0/0:149:149,0:149:5268:0:0:0,-44.8535,-474.236	0/0:98:98,0:98:3524:0:0:0,-29.5009,-315.132	0/0:152:152,0:152:5403:0:0:0,-45.7566,-485.921	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.766	0/0:28:28,0:28:991:0:0:0,-8.42884,-88.3032	0/0:199:199,0:199:7098:0:0:0,-59.905,-637.401	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.918	0/0:43:43,0:43:1544:0:0:0,-12.9443,-138.978	0/1:20:17,3:17:612:3:108:-4.05175,0,-49.1399	0/0:103:103,0:103:3669:0:0:0,-31.0061,-329.899	0/0:118:115,3:115:4060:3:108:0,-25.4536,-355.455	0/0:54:54,0:54:1936:0:0:0,-16.2556,-173.922	0/0:168:168,0:168:5998:0:0:0,-50.573,-539.654	0/0:175:175,0:175:6213:0:0:0,-52.6802,-559.246	0/1:77:38,39:38:1353:39:1357:-98.7911,0,-98.788	0/0:97:97,0:97:3484:0:0:0,-29.1999,-313.729	0/0:207:204,3:204:7286:3:104:0,-52.6172,-645.936	0/0:142:139,3:139:4976:3:108:0,-32.6784,-437.88	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.219	0/0:54:54,0:54:1917:0:0:0,-16.2556,-172.733	0/1:46:26,20:26:928:20:701:-49.5389,0,-69.9891	0/0:32:32,0:32:1133:0:0:0,-9.63296,-102.101	0/1:102:59,43:59:2105:43:1532:-106.029,0,-158.926	0/1:105:52,53:52:1853:53:1854:-134.93,0,-135.272	0/1:118:84,34:84:3004:34:1181:-70.8715,0,-234.487	0/1:176:100,76:100:3596:76:2670:-187.039,0,-270.195	0/1:50:36,14:36:1273:14:504:-30.2869,0,-99.7574	0/1:119:62,57:62:2228:57:2002:-143.396,0,-164.651	0/0:25:25,0:25:900:0:0:0,-7.52575,-80.6172	0/0:115:115,0:115:4117:0:0:0,-34.6184,-369.993	0/1:120:71,49:71:2544:49:1744:-120.003,0,-192.832	0/1:200:128,72:128:4584:72:2560:-169.368,0,-351.266	0/1:83:42,41:42:1500:41:1472:-106.921,0,-110.295	0/1:111:51,60:51:1836:60:2123:-157.151,0,-131.879	0/1:65:33,32:33:1173:32:1140:-83.2425,0,-86.2992	0/1:139:79,60:79:2836:60:2160:-151.859,0,-213.438	0/1:27:9,18:9:324:18:644:-50.0146,0,-21.3698	0/0:89:89,0:89:3185:0:0:0,-26.7917,-286.773	0/0:115:115,0:115:4120:0:0:0,-34.6184,-370.859	0/0:67:67,0:67:2393:0:0:0,-20.169,-215.402	0/1:97:59,38:59:2120:38:1360:-92.8234,0,-161.741	0/1:99:37,62:37:1309:62:2204:-167.945,0,-88.3052	0/0:156:156,0:156:5577:0:0:0,-46.9607,-502.027	0/0:165:165,0:165:5920:0:0:0,-49.6699,-532.89
chr01	16258504	.	T	G	7836.71	PASS	AB=0.23345;ABP=2109.86;AC=74;AF=0.393617;AN=188;AO=914;CIGAR=1X;DP=4828;DPB=4828;DPRA=1.53333;EPP=1987.74;EPPR=8493.47;GTI=33;LEN=1;MEANALT=1.04444;MQM=59.709;MQMR=59.9049;NS=94;NUMALT=1;ODDS=0.197703;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=32562;QR=140034;RO=3910;RPL=0;RPP=1987.74;RPPR=8484.78;RPR=914;RUN=1;SAF=0;SAP=1987.74;SAR=914;SRF=1;SRP=8484.78;SRR=3909;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:11:1,10:1:36:10:360:-29.433,0,-0.286945	0/0:48:44,4:44:1563:4:144:0,-1.13582,-127.647	0/1:42:22,20:22:792:20:720:-52.4855,0,-58.9624	0/1:170:145,25:145:5208:25:881:-28.4282,0,-417.682	0/1:8:2,6:2:72:6:216:-17.3729,0,-4.42848	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/0:44:43,1:43:1548:1:36:0,-9.64704,-136.01	0/1:62:34,28:34:1220:28:1004:-71.9957,0,-91.4429	0/1:46:27,19:27:964:19:684:-48.021,0,-73.2294	0/0:79:79,0:79:2832:0:0:0,-23.7814,-255.112	0/1:22:19,3:19:676:3:108:-3.44767,0,-54.5453	0/1:66:57,9:57:2044:9:324:-9.62963,0,-164.364	0/0:63:57,5:57:2037:5:172:0,-3.2023,-167.727	0/1:34:29,5:29:1044:5:176:-5.95,0,-84.0394	0/0:42:39,3:39:1396:3:108:0,-2.56809,-115.853	0/0:43:41,2:41:1456:2:72:0,-6.11241,-124.504	0/1:28:25,3:25:900:3:108:-1.64633,0,-72.8922	0/1:28:24,4:24:860:4:144:-4.88478,0,-69.2848	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:23:20,3:20:720:3:104:-2.77912,0,-58.2051	0/1:81:62,19:62:2209:19:671:-36.3185,0,-174.69	0/1:22:17,5:17:612:5:180:-9.91146,0,-48.7908	0/1:40:29,11:29:1044:11:396:-23.9415,0,-82.2336	0/1:29:22,7:22:783:7:248:-13.9343,0,-62.0631	0/1:9:3,6:3:108:6:207:-16.2576,0,-7.3659	0/1:134:114,20:114:4077:20:697:-22.7126,0,-326.768	0/1:120:96,24:96:3435:24:852:-40.8761,0,-273.173	0/1:42:35,7:35:1244:7:243:-9.56422,0,-99.6214	0/1:123:108,15:108:3873:15:531:-11.0952,0,-311.736	0/0:71:67,4:67:2404:4:144:0,-8.05951,-203.298	0/1:50:44,6:44:1576:6:207:-3.91539,0,-127.08	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:31:3,28:3:108:28:993:-80.3424,0,-0.74324	0/1:18:6,12:6:212:12:432:-33.8027,0,-14.0063	0/1:22:2,20:2:72:20:720:-58.5061,0,-0.205468	0/1:126:109,17:109:3908:17:612:-17.4837,0,-313.979	0/1:22:18,4:18:644:4:144:-6.69096,0,-51.6679	0/1:31:28,3:28:1008:3:108:-0.74324,0,-81.7044	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/0:88:81,7:81:2904:7:252:0,-3.46168,-238.56	0/0:20:19,1:19:684:1:36:0,-2.42232,-58.1619	0/1:33:17,16:17:612:16:568:-41.5179,0,-45.4794	0/1:34:28,6:28:1004:6:216:-9.55311,0,-80.4408	0/0:34:34,0:34:1201:0:0:0,-10.235,-108.393	0/1:30:11,19:11:396:19:672:-51.7759,0,-25.9233	0/1:10:3,7:3:108:7:252:-20.0187,0,-7.06487	0/1:99:63,36:63:2256:36:1284:-86.0493,0,-173.499	0/0:36:34,2:34:1220:2:72:0,-4.00036,-103.27	0/1:67:53,14:53:1889:14:500:-25.1672,0,-150.117	0/1:36:32,4:32:1152:4:144:-2.47654,0,-93.1531	0/1:10:3,7:3:104:7:252:-20.0187,0,-6.69251	0/1:43:30,13:30:1076:13:464:-29.1532,0,-84.2086	0/1:45:27,18:27:964:18:644:-44.7433,0,-73.5305	0/1:23:11,12:11:392:12:424:-31.5645,0,-28.6964	0/1:92:79,13:79:2806:13:460:-14.0406,0,-225.054	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/1:26:5,21:5:176:21:756:-60.5386,0,-8.35824	0/1:11:10,1:10:360:1:36:-0.286945,0,-29.433	0/1:29:25,4:25:900:4:144:-4.58375,0,-72.5865	0/1:83:66,17:66:2376:17:612:-30.4279,0,-189.076	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	0/0:239:218,21:218:7829:21:748:0,-4.30178,-636.985	0/1:45:34,11:34:1220:11:392:-22.0713,0,-96.5605	0/0:53:50,3:50:1785:3:108:0,-5.87942,-150.851	0/1:29:13,16:13:468:16:572:-43.0836,0,-33.7298	0/0:63:59,4:59:2120:4:144:0,-5.65127,-177.732	0/1:64:58,6:58:2069:6:216:-0.524593,0,-167.213	0/1:16:12,4:12:432:4:137:-7.77351,0,-34.4047	0/1:27:22,5:22:792:5:176:-8.05387,0,-63.4779	0/1:50:44,6:44:1572:6:216:-4.73901,0,-126.718	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:55:47,7:47:1688:7:252:-6.44842,0,-135.622	0/0:71:70,1:70:2504:1:27:0,-18.6733,-222.905	0/1:43:31,12:31:1116:12:420:-25.0567,0,-87.8074	0/1:178:154,24:154:5468:24:849:-23.1445,0,-438.64	0/1:27:17,10:17:608:10:360:-24.6165,0,-46.9242	0/0:121:110,11:110:3936:11:387:0,-1.25869,-319.263	0/1:34:26,8:26:936:8:288:-16.0324,0,-74.3244	0/1:93:67,26:67:2412:26:924:-55.4726,0,-189.34	0/1:69:46,23:46:1656:23:828:-54.0649,0,-128.549	0/1:111:84,27:84:2997:27:960:-53.2987,0,-236.545	0/1:39:35,4:35:1260:4:140:-1.20201,0,-101.965	0/1:74:64,10:64:2273:10:360:-10.4681,0,-182.555	0/0:27:25,2:25:892:2:72:0,-1.29109,-73.763	0/0:97:89,7:89:3192:7:243:0,-7.01471,-265.288	0/1:11:9,2:9:320:2:68:-3.14638,0,-25.831	0/1:36:31,5:31:1116:5:165:-4.33652,0,-89.9146	0/1:52:47,5:47:1688:5:180:-0.898505,0,-136.553	0/0:12:11,1:11:392:1:36:0,-0.0140849,-32.0218	0/0:55:54,1:54:1932:1:32:0,-13.3573,-170.957	0/0:49:47,1:47:1692:1:36:0,-11.211,-148.94	0/1:142:128,14:128:4600:14:504:-2.95183,0,-371.416	0/1:76:65,11:65:2328:11:396:-13.1045,0,-186.902
chr01	16258518	.	GCCAA	ACCAA,ACCAG	97677.2	PASS	AB=0.564123,0.428755;ABP=92.4033,105.735;AC=139,37;AF=0.739362,0.196809;AN=188;AO=3675,1005;CIGAR=1X4M,1X3M1X;DP=4824;DPB=4823.6;DPRA=0,1.09761;EPP=7983.17,2185.34;EPPR=250.558;GTI=10;LEN=1,5;MEANALT=1.75532,2.32558;MQM=59.9176,59.797;MQMR=60;NS=94;NUMALT=2;ODDS=3520.96;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=131254,35472;QR=3989;RO=114;RPL=0,0;RPP=7983.17,2185.34;RPPR=250.558;RPR=3675,1005;RUN=1,1;SAF=0,0;SAP=7983.17,2185.34;SAR=3675,1005;SRF=0;SRP=250.558;SRR=114;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:12:3,9,0:3:101:9,0:324,0:-25.8935,0,-5.81077,-26.7966,-8.52004,-34.9743	1/2:47:2,31,13:2:71:31,13:1103,467:-121.602,-32.3142,-28.7669,-84.1063,0,-85.9781	1/1:44:3,41,0:3:106:41,0:1472,0:-122.887,-3.35616,0,-123.79,-12.3422,-132.423	1/1:173:4,167,0:4:139:167,0:5990,0:-526.247,-38.9795,0,-527.451,-50.272,-538.751	1/1:8:0,8,0:0:0:8,0:288,0:-26.2581,-2.40824,0,-26.2581,-2.40824,-26.2581	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:44:0,13,31:0:0:13,31:468,1102:-128.342,-90.1539,-86.2405,-38.5463,0,-29.2143	1/1:64:1,63,0:1:36:63,0:2240,0:-198.239,-15.6676,0,-198.54,-18.9649,-201.477	1/2:46:0,38,8:0:0:38,8:1353,285:-133.838,-23.5863,-12.1472,-110.607,0,-108.199	1/1:76:0,76,0:0:0:76,0:2711,0:-244.234,-22.8783,0,-244.234,-22.8783,-244.234	1/1:22:0,21,0:0:0:21,0:756,0:-68.0053,-6.32163,0,-68.0053,-6.32163,-68.0053	1/1:66:1,65,0:1:36:65,0:2340,0:-207.251,-16.2697,0,-207.552,-19.567,-210.489	1/2:63:2,33,27:2:63:33,27:1184,943:-167.62,-71.6406,-66.7712,-91.5529,0,-88.4895	1/1:34:0,34,0:0:0:34,0:1201,0:-108.393,-10.235,0,-108.393,-10.235,-108.393	1/2:42:0,19,22:0:0:19,22:676,779:-118.58,-63.4854,-57.7658,-55.127,0,-48.5043	1/1:42:0,42,0:0:0:42,0:1483,0:-133.759,-12.6433,0,-133.759,-12.6433,-133.759	1/1:28:0,27,0:0:0:27,0:968,0:-87.0776,-8.12781,0,-87.0776,-8.12781,-87.0776	1/2:28:0,15,13:0:0:15,13:534,446:-80.0745,-36.5452,-32.0297,-43.8783,0,-39.9649	1/2:6:0,3,3:0:0:3,3:108,108:-17.9843,-9.17208,-8.26899,-9.17208,0,-8.26899	1/2:24:0,15,9:0:0:15,9:525,321:-69.2328,-26.5242,-22.0087,-43.0626,0,-40.3533	1/2:82:0,62,20:0:0:62,20:2224,697:-238.427,-57.0315,-38.3676,-181.746,0,-175.726	1/2:22:0,7,15:0:0:7,15:252,532:-64.2436,-43.6976,-41.5904,-20.9039,0,-16.3885	1/1:41:3,38,0:3:108:38,0:1355,0:-112.175,-2.26706,0,-113.078,-11.4391,-121.89	1/1:29:1,27,1:1:36:27,1:957,36:-82.8458,-5.19039,0,-80.2092,-5.19039,-82.8458	0/1:9:1,8,0:1:34:8,0:288,0:-23.5581,0,-0.689641,-23.8592,-3.09788,-26.6149	1/2:133:2,73,57:2:67:73,57:2569,2028:-368.414,-159.889,-143.339,-203.737,0,-192.003	1/2:121:3,64,52:3:108:64,52:2282,1845:-326.633,-141.516,-131.062,-177.223,0,-170.382	1/1:40:0,40,0:0:0:40,0:1420,0:-128.097,-12.0412,0,-128.097,-12.0412,-128.097	1/1:122:0,121,0:0:0:121,0:4324,0:-388.974,-36.4246,0,-388.974,-36.4246,-388.974	1/1:70:0,66,4:0:0:66,4:2355,144:-211.848,-19.868,0,-200.098,-7.75848,-198.894	1/1:48:1,47,0:1:36:47,0:1692,0:-148.969,-10.8512,0,-149.27,-14.1484,-152.207	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	0/1:32:11,20,1:11:362:20,1:716,36:-55.0679,0,-23.2085,-55.4417,-26.2891,-84.3878	0/1:18:2,16,0:2:72:16,0:572,0:-46.3949,0,-1.41818,-46.9969,-6.23466,-52.8721	0/1:22:3,18,1:3:108:18,1:648,36:-51.9713,0,-3.39439,-49.9451,-5.88388,-58.4564	1/2:123:2,67,54:2:72:67,54:2412,1919:-346.699,-150.492,-136.198,-190.932,0,-180.551	1/2:23:0,13,9:0:0:13,9:468,323:-64.5331,-26.3461,-22.4327,-38.1864,0,-35.4772	1/2:30:1,14,15:1:31:14,15:504,518:-80.4618,-39.6319,-37.9038,-38.6852,0,-36.655	1/1:17:1,16,0:1:35:16,0:576,0:-48.6764,-1.61888,0,-48.9774,-4.81648,-51.8245	1/2:87:0,47,40:0:0:47,40:1675,1427:-253.215,-116.683,-102.535,-136.888,0,-124.847	1/1:19:0,19,0:0:0:19,0:680,0:-61.5292,-5.71957,0,-61.5292,-5.71957,-61.5292	1/1:32:2,29,1:2:68:29,1:1023,36:-85.9175,-3.2274,0,-83.5819,-5.7858,-88.7958	1/1:34:1,33,0:1:36:33,0:1169,0:-101.916,-6.63675,0,-102.217,-9.93399,-105.154	1/1:35:0,34,0:0:0:34,0:1220,0:-109.834,-10.235,0,-109.834,-10.235,-109.834	1/1:30:0,28,0:0:0:28,0:1004,0:-90.3978,-8.42884,0,-90.3978,-8.42884,-90.3978	0/1:10:2,7,1:2:72:7,1:252,36:-19.9599,0,-3.76762,-17.6245,-2.93742,-23.1983	1/2:100:3,59,36:3:108:59,36:2120,1238:-263.754,-91.7055,-82.7581,-164.13,0,-162.106	1/2:38:0,22,16:0:0:22,16:788,565:-110.631,-46.3643,-39.7417,-64.6221,0,-59.8057	1/2:68:1,43,24:1:34:43,24:1536,858:-192.149,-67.2189,-57.0319,-122.491,0,-118.024	1/1:36:1,35,0:1:36:35,0:1256,0:-109.747,-7.23881,0,-110.048,-10.5361,-112.985	0/1:10:1,9,0:1:36:9,0:315,0:-25.6769,0,-0.587975,-25.978,-3.29724,-28.9164	1/1:43:0,43,0:0:0:43,0:1525,0:-137.541,-12.9443,0,-137.541,-12.9443,-137.541	1/1:44:2,42,0:2:72:42,0:1504,0:-128.817,-6.4086,0,-129.419,-12.6433,-135.294	0/1:24:3,21,0:3:98:21,0:756,0:-61.1205,0,-1.91932,-62.0236,-8.24095,-69.9339	1/1:93:1,91,0:1:35:91,0:3230,0:-287.466,-24.5009,0,-287.767,-27.3937,-290.614	1/1:12:1,11,0:1:36:11,0:392,0:-32.0218,-0.0140851,0,-32.3228,-3.31133,-35.2605	0/1:27:3,24,0:3:106:24,0:855,0:-69.139,0,-1.76129,-70.0421,-8.98601,-78.6746	1/2:11:0,6,5:0:0:6,5:216,178:-32.4902,-14.8635,-13.0573,-17.9843,0,-16.4792	1/1:31:0,31,0:0:0:31,0:1108,0:-100.026,-9.33193,0,-100.026,-9.33193,-100.026	1/1:81:1,80,0:1:36:80,0:2855,0:-253.587,-20.7852,0,-253.888,-24.0824,-256.825	0/1:14:4,10,0:4:138:10,0:360,0:-28.5299,0,-8.54562,-29.734,-11.5559,-40.9408	1/1:236:3,232,0:3:108:232,0:8323,0:-739.013,-60.9816,0,-739.916,-69.839,-748.728	1/1:45:0,45,0:0:0:45,0:1616,0:-145.728,-13.5464,0,-145.728,-13.5464,-145.728	1/2:53:0,28,24:0:0:28,24:997,842:-149.776,-68.5142,-60.0854,-81.2558,0,-74.0311	0/1:26:3,23,0:3:100:23,0:824,0:-66.6565,0,-1.50363,-67.5596,-8.42732,-75.6508	1/1:63:0,61,0:0:0:61,0:2175,0:-195.719,-18.3628,0,-195.719,-18.3628,-195.719	1/1:64:0,64,0:0:0:64,0:2272,0:-204.74,-19.2659,0,-204.74,-19.2659,-204.74	1/1:16:0,16,0:0:0:16,0:563,0:-50.9528,-4.81648,0,-50.9528,-4.81648,-50.9528	1/1:28:0,27,0:0:0:27,0:960,0:-86.4882,-8.12781,0,-86.4882,-8.12781,-86.4882	1/2:50:1,25,24:1:36:25,24:888,856:-138.895,-66.8385,-62.2503,-69.416,0,-65.1289	1/1:17:0,17,0:0:0:17,0:612,0:-55.4134,-5.11751,0,-55.4134,-5.11751,-55.4134	1/2:54:1,28,25:1:36:28,25:999,886:-150.366,-69.2269,-63.7357,-78.4984,0,-73.9102	1/2:70:0,41,27:0:0:41,27:1448,935:-193.991,-76.0648,-63.7225,-118.013,0,-109.885	1/2:42:2,23,17:2:72:23,17:824,606:-110.12,-43.5195,-42.471,-61.325,0,-62.0824	1/2:178:3,82,92:3:107:82,92:2931,3228:-492.053,-253.97,-238.009,-230.284,0,-211.311	1/2:26:0,14,12:0:0:14,12:495,426:-75.3797,-35.0652,-30.8508,-40.6686,0,-37.0563	1/2:122:1,69,52:1:36:69,52:2446,1836:-345.535,-146.569,-128.735,-196.324,0,-183.608	0/1:33:4,29,0:4:139:29,0:1036,0:-83.6199,0,-2.91822,-84.824,-11.6481,-96.1236	1/1:91:4,87,0:4:143:87,0:3115,0:-267.345,-14.1723,0,-268.55,-26.1896,-280.209	1/2:68:2,40,26:2:72:40,26:1436,925:-186.022,-69.4927,-63.3266,-111.254,0,-109.302	1/2:111:2,71,37:2:72:71,37:2525,1313:-306.266,-101.099,-85.6006,-199.889,0,-194.626	1/2:40:1,19,19:1:36:19,19:676,665:-105.979,-51.186,-48.4045,-52.176,0,-49.3942	1/2:75:5,26,44:5:180:26,44:936,1531:-184.659,-109.787,-116.649,-61.6858,0,-63.1275	1/2:28:1,13,14:1:36:13,14:464,501:-75.4411,-37.9152,-36.9394,-34.8869,0,-33.6101	1/2:97:2,41,54:2:72:41,54:1437,1935:-268.254,-151.932,-145.464,-111.043,0,-100.663	1/2:11:0,8,3:0:0:8,3:288,107:-32.5808,-9.07908,-6.67084,-23.8592,0,-22.9561	1/1:39:1,38,0:1:36:38,0:1356,0:-118.742,-8.1419,0,-119.043,-11.4391,-121.981	1/1:51:1,50,0:1:35:50,0:1783,0:-157.253,-11.8539,0,-157.554,-15.0515,-160.402	1/1:12:1,11,0:1:36:11,0:396,0:-32.3845,-0.0140851,0,-32.6855,-3.31133,-35.6229	1/2:54:0,29,25:0:0:29,25:1025,857:-153.4,-69.9164,-61.1865,-83.8308,0,-76.3051	1/2:49:0,17,32:0:0:17,32:612,1120:-141.413,-91.4734,-86.3559,-50.2955,0,-40.6626	1/1:145:3,140,0:3:105:140,0:5040,0:-443.942,-33.6072,0,-444.845,-42.1442,-453.388	1/1:75:0,75,0:0:0:75,0:2679,0:-241.355,-22.5773,0,-241.355,-22.5773,-241.355
chr01	16518323	.	ATCCTTAC	ATCCTGAC,GTCCTAC	119724	PASS	AB=0.467339,0.522956;ABP=27.8335,15.2732;AC=145,43;AF=0.771277,0.228723;AN=188;AO=4147,1445;CIGAR=5M1X2M,1X3M1D3M;DP=5638;DPB=5456.25;DPRA=13.5966,1.40366;EPP=9008.11,3140.79;EPPR=9.52472;GTI=0;LEN=1,7;MEANALT=1.8587,2.48889;MQM=59.3169,55.018;MQMR=60;NS=94;NUMALT=2;ODDS=1.41481;PAIRED=0,0;PAIREDR=0;PAO=0.333333,5;PQA=0,180;PQR=0;PRO=0.333333;QA=148233,50964;QR=108;RO=3;RPL=0,0;RPP=9008.11,3140.79;RPPR=9.52472;RPR=4147,1445;RUN=1,1;SAF=4147,1445;SAP=9008.11,3140.79;SAR=0,0;SRF=3;SRP=9.52472;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:11:0,10,0:0:0:10,0:352,0:-31.6632,-3.0103,0,-31.6632,-3.0103,-31.6632	1/2:72:0,28,44:0:0:28,44:981,1562:-206.929,-127.25,-118.821,-80.0302,0,-66.7849	1/1:83:0,83,0:0:0:83,0:2968,0:-267.222,-24.9855,0,-267.222,-24.9855,-267.222	1/1:143:0,143,0:0:0:143,0:5108,0:-459.727,-43.0473,0,-459.727,-43.0473,-459.727	1/1:35:0,35,0:0:0:35,0:1260,0:-113.579,-10.5361,0,-113.579,-10.5361,-113.579	1/1:43:0,41,0:0:0:41,0:1452,0:-130.571,-12.3422,0,-130.571,-12.3422,-130.571	1/2:84:0,34,48:0:0:34,48:1220,1703:-237.912,-138.403,-128.168,-99.5357,0,-85.0862	1/1:73:0,73,0:0:0:73,0:2624,0:-236.2,-21.9752,0,-236.2,-21.9752,-236.2	1/2:42:0,14,22:0:0:14,22:504,780:-104.533,-63.4058,-59.1913,-41.1416,0,-34.5189	1/1:41:0,41,0:0:0:41,0:1457,0:-131.317,-12.3422,0,-131.317,-12.3422,-131.317	1/1:51:0,51,0:0:0:51,0:1810,0:-163.145,-15.3525,0,-163.145,-15.3525,-163.145	1/1:80:0,79,0:0:0:79,0:2844,0:-255.873,-23.7814,0,-255.873,-23.7814,-255.873	1/2:35:0,12,23:0:0:12,23:432,792:-99.8016,-64.5479,-60.9356,-35.6079,0,-28.6842	1/1:39:1,38,0:1:36:38,0:1364,0:-119.402,-8.1419,0,-119.703,-11.4391,-122.641	1/2:51:0,25,26:0:0:25,26:892,905:-146.5,-73.7777,-66.2519,-73.0739,0,-65.2472	1/1:42:0,42,0:0:0:42,0:1504,0:-135.597,-12.6433,0,-135.597,-12.6433,-135.597	1/1:38:0,37,0:0:0:37,0:1315,0:-118.278,-11.1381,0,-118.278,-11.1381,-118.278	1/2:49:0,18,31:0:0:18,31:648,1090:-141.045,-88.1688,-82.7502,-53.2315,0,-43.8996	1/2:28:0,13,15:0:0:13,15:468,526:-81.2619,-43.0709,-39.1575,-38.5463,0,-34.0308	1/2:111:1,43,66:1:36:43,66:1536,2329:-311.174,-186.26,-176.253,-122.274,0,-105.344	1/2:63:0,36,26:0:0:36,26:1292,913:-179.352,-73.9669,-63.1298,-105.396,0,-97.5689	1/2:94:0,37,57:0:0:37,57:1316,2003:-270.436,-163.193,-152.055,-107.596,0,-90.4372	1/1:33:0,33,0:0:0:33,0:1180,0:-106.466,-9.93399,0,-106.466,-9.93399,-106.466	1/1:38:0,36,1:0:0:36,1:1284,36:-115.554,-10.8371,0,-112.62,-7.84813,-112.318	1/1:31:0,31,0:0:0:31,0:1112,0:-100.375,-9.33193,0,-100.375,-9.33193,-100.375	1/2:152:0,76,75:0:0:76,75:2709,2642:-435.709,-214.937,-192.059,-220.768,0,-198.191	1/2:119:0,61,58:0:0:61,58:2180,2044:-344.199,-166.507,-148.144,-178.046,0,-160.587	1/1:24:0,24,0:0:0:24,0:860,0:-77.7195,-7.22472,0,-77.7195,-7.22472,-77.7195	1/1:182:0,181,0:0:0:181,0:6466,0:-581.733,-54.4864,0,-581.733,-54.4864,-581.733	1/1:70:0,69,1:0:0:69,1:2476,36:-222.66,-20.7711,0,-219.726,-17.4775,-219.425	1/1:75:0,75,0:0:0:75,0:2676,0:-241.018,-22.5773,0,-241.018,-22.5773,-241.018	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:20:0,19,0:0:0:19,0:680,0:-61.2109,-5.71957,0,-61.2109,-5.71957,-61.2109	2/2:5:0,0,4:0:0:0,4:0,144:-12.9286,-12.9286,-12.9286,-1.20412,-1.20412,0	1/1:6:0,6,0:0:0:6,0:212,0:-19.4107,-1.80618,0,-19.4107,-1.80618,-19.4107	1/1:13:0,13,0:0:0:13,0:453,0:-41.0996,-3.91339,0,-41.0996,-3.91339,-41.0996	1/2:123:0,55,67:0:0:55,67:1976,2392:-355.842,-194.68,-178.123,-161.162,0,-140.993	1/2:90:0,48,41:0:0:48,41:1715,1439:-256.793,-117.022,-102.572,-139.81,0,-127.467	1/2:40:0,16,24:0:0:16,24:568,855:-116.164,-69.8833,-65.0668,-46.6354,0,-39.4107	2/2:4:0,0,4:0:0:0,4:0,144:-13.1946,-13.1946,-13.1946,-1.20412,-1.20412,0	1/2:68:0,28,40:0:0:28,40:1008,1402:-196.218,-113.98,-105.551,-82.5938,0,-70.5526	1/1:27:0,27,0:0:0:27,0:968,0:-87.3919,-8.12781,0,-87.3919,-8.12781,-87.3919	1/1:49:0,49,0:0:0:49,0:1746,0:-157.372,-14.7505,0,-157.372,-14.7505,-157.372	1/1:30:0,30,0:0:0:30,0:1076,0:-97.1026,-9.0309,0,-97.1026,-9.0309,-97.1026	1/1:44:0,43,0:0:0:43,0:1539,0:-138.501,-12.9443,0,-138.501,-12.9443,-138.501	1/1:50:0,50,0:0:0:50,0:1784,0:-160.838,-15.0515,0,-160.838,-15.0515,-160.838	1/1:105:0,105,0:0:0:105,0:3749,0:-337.571,-31.6082,0,-337.571,-31.6082,-337.571	1/2:108:0,58,50:0:0:58,50:2080,1753:-312.47,-142.869,-125.41,-169.955,0,-154.903	1/2:72:0,36,36:0:0:36,36:1277,1275:-207.416,-104.043,-93.2055,-103.726,0,-92.8892	1/2:75:0,40,34:0:0:40,34:1431,1211:-215.366,-98.6835,-86.6423,-116.785,0,-106.55	1/1:80:0,78,0:0:0:78,0:2781,0:-250.156,-23.4803,0,-250.156,-23.4803,-250.156	1/1:6:0,6,0:0:0:6,0:212,0:-19.4248,-1.80618,0,-19.4248,-1.80618,-19.4248	1/1:88:0,88,0:0:0:88,0:3168,0:-285.226,-26.4906,0,-285.226,-26.4906,-285.226	1/1:44:0,44,0:0:0:44,0:1576,0:-142.108,-13.2453,0,-142.108,-13.2453,-142.108	1/1:7:0,7,0:0:0:7,0:248,0:-22.3888,-2.10721,0,-22.3888,-2.10721,-22.3888	1/1:134:0,133,0:0:0:133,0:4761,0:-428.096,-40.037,0,-428.096,-40.037,-428.096	1/1:42:0,42,0:0:0:42,0:1490,0:-134.229,-12.6433,0,-134.229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chr01	16518366	.	GATCA	TATCG,TATCA	119014	PASS	AB=0.480927,0.517577;ABP=11.4591,10.1857;AC=145,43;AF=0.771277,0.228723;AN=188;AO=4222,1431;CIGAR=1X3M1X,1X4M;DP=5670;DPB=5671.8;DPRA=13.6739,1.36553;EPP=9170.97,3110.39;EPPR=7.35324;GTI=0;LEN=5,1;MEANALT=1.6413,2.08696;MQM=59.2084,55.0846;MQMR=60;NS=94;NUMALT=2;ODDS=2.30168;PAIRED=0,0;PAIREDR=0;PAO=4.5,4.5;PQA=153.5,153.5;PQR=0;PRO=0;QA=148227,50823;QR=67;RO=2;RPL=4222,1431;RPP=9170.97,3110.39;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=4222,1431;SAP=9170.97,3110.39;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:12:0,12,0:0:0:12,0:410,0:-37.1911,-3.61236,0,-37.1911,-3.61236,-37.1911	1/2:71:0,28,43:0:0:28,43:985,1540:-205.547,-125.498,-117.069,-80.4025,0,-67.4582	1/1:85:0,85,0:0:0:85,0:2963,0:-266.78,-25.5876,0,-266.78,-25.5876,-266.78	1/1:144:0,144,0:0:0:144,0:5069,0:-456.271,-43.3483,0,-456.271,-43.3483,-456.271	1/1:36:0,34,1:0:0:34,1:1202,36:-108.039,-10.235,0,-105.102,-7.27242,-104.801	1/1:45:0,45,0:0:0:45,0:1549,0:-139.599,-13.5464,0,-139.599,-13.5464,-139.599	1/2:86:0,38,48:0:0:38,48:1327,1697:-246.053,-138.271,-126.832,-108.132,0,-93.6825	1/1:75:0,74,0:0:0:74,0:2608,0:-234.505,-22.2762,0,-234.505,-22.2762,-234.505	1/2:42:0,19,23:0:0:19,23:672,815:-120.846,-66.4231,-60.7035,-54.7748,0,-47.8511	1/1:40:0,40,0:0:0:40,0:1404,0:-126.602,-12.0412,0,-126.602,-12.0412,-126.602	1/1:51:0,51,0:0:0:51,0:1788,0:-161.166,-15.3525,0,-161.166,-15.3525,-161.166	1/1:80:0,80,0:0:0:80,0:2808,0:-252.735,-24.0824,0,-252.735,-24.0824,-252.735	1/2:35:0,13,22:0:0:13,22:454,760:-98.9066,-61.9757,-58.0623,-37.2784,0,-30.6557	1/1:40:1,39,0:1:36:39,0:1362,0:-119.233,-8.44293,0,-119.534,-11.7402,-122.472	1/2:51:0,26,24:0:0:26,24:918,839:-142.905,-68.146,-60.3192,-74.7511,0,-67.5264	1/1:43:0,43,0:0:0:43,0:1531,0:-138.025,-12.9443,0,-138.025,-12.9443,-138.025	1/1:38:0,38,0:0:0:38,0:1326,0:-119.58,-11.4391,0,-119.58,-11.4391,-119.58	1/2:48:0,18,29:0:0:18,29:644,1029:-135.708,-83.1918,-77.7733,-52.6166,0,-43.8868	1/2:29:0,13,16:0:0:13,16:451,568:-83.2008,-46.5435,-42.6301,-37.0074,0,-32.191	1/2:109:0,45,64:0:0:45,64:1594,2279:-315.634,-185.82,-172.274,-130.169,0,-110.903	1/2:61:0,36,25:0:0:36,25:1264,888:-175.307,-72.4388,-61.6017,-103.221,0,-95.6949	1/2:93:0,37,56:0:0:37,56:1307,1979:-267.902,-161.469,-150.331,-106.787,0,-89.9291	1/1:32:0,32,0:0:0:32,0:1117,0:-100.816,-9.63296,0,-100.816,-9.63296,-100.816	1/1:41:0,40,1:0:0:40,1:1408,36:-126.098,-12.0412,0,-123.163,-8.74766,-122.862	1/1:31:0,31,0:0:0:31,0:1083,0:-97.765,-9.33193,0,-97.765,-9.33193,-97.765	1/2:153:0,77,76:0:0:77,76:2702,2706:-440.534,-220.678,-197.499,-220.209,0,-197.331	1/2:121:0,63,58:0:0:63,58:2223,2076:-350.334,-169.357,-150.393,-181.331,0,-163.872	1/1:25:0,25,0:0:0:25,0:877,0:-79.2455,-7.52575,0,-79.2455,-7.52575,-79.2455	1/1:181:0,180,0:0:0:180,0:6295,0:-566.255,-54.1854,0,-566.255,-54.1854,-566.255	1/1:71:0,69,1:0:0:69,1:2424,32:-218.023,-20.7711,0,-215.447,-18.2085,-215.146	1/1:77:0,75,0:0:0:75,0:2645,0:-237.968,-22.5773,0,-237.968,-22.5773,-237.968	1/1:4:0,4,0:0:0:4,0:142,0:-13.1292,-1.20412,0,-13.1292,-1.20412,-13.1292	1/1:20:0,20,0:0:0:20,0:690,0:-62.36,-6.0206,0,-62.36,-6.0206,-62.36	2/2:5:0,0,5:0:0:0,5:0,180:-16.5268,-16.5268,-16.5268,-1.50515,-1.50515,0	1/1:6:0,6,0:0:0:6,0:201,0:-18.4068,-1.80618,0,-18.4068,-1.80618,-18.4068	1/1:13:0,13,0:0:0:13,0:464,0:-42.0978,-3.91339,0,-42.0978,-3.91339,-42.0978	1/2:120:0,56,64:0:0:56,64:1976,2284:-347.324,-186.455,-169.597,-161.224,0,-141.958	1/2:90:0,50,40:0:0:50,40:1782,1423:-261.016,-116.193,-101.141,-145.179,0,-133.138	1/2:41:1,17,23:1:31:17,23:596,820:-112.431,-64.2341,-61.6032,-46.0521,0,-41.6147	2/2:4:0,0,4:0:0:0,4:0,144:-13.1946,-13.1946,-13.1946,-1.20412,-1.20412,0	1/2:68:0,28,39:0:0:28,39:993,1383:-193.186,-112.284,-103.855,-80.8979,0,-69.1578	1/1:28:0,28,0:0:0:28,0:994,0:-89.7325,-8.42884,0,-89.7325,-8.42884,-89.7325	1/1:51:0,51,0:0:0:51,0:1799,0:-162.082,-15.3525,0,-162.082,-15.3525,-162.082	1/1:32:0,32,0:0:0:32,0:1126,0:-101.601,-9.63296,0,-101.601,-9.63296,-101.601	1/1:45:0,45,0:0:0:45,0:1563,0:-140.871,-13.5464,0,-140.871,-13.5464,-140.871	1/1:52:0,52,0:0:0:52,0:1833,0:-165.247,-15.6536,0,-165.247,-15.6536,-165.247	1/1:106:0,105,0:0:0:105,0:3713,0:-333.981,-31.6082,0,-333.981,-31.6082,-333.981	1/2:109:0,60,49:0:0:60,49:2117,1744:-314.631,-142.29,-124.228,-172.637,0,-157.886	1/2:70:0,36,34:0:0:36,34:1263,1216:-201.138,-99.3107,-88.4736,-102.18,0,-91.9451	1/2:75:0,41,34:0:0:41,34:1430,1192:-213.493,-97.2091,-84.8669,-116.633,0,-106.398	1/1:81:0,81,0:0:0:81,0:2832,0:-255.06,-24.3834,0,-255.06,-24.3834,-255.06	1/1:6:0,6,0:0:0:6,0:199,0:-18.2356,-1.80618,0,-18.2356,-1.80618,-18.2356	1/1:88:0,88,0:0:0:88,0:3127,0:-280.521,-26.4906,0,-280.521,-26.4906,-280.521	1/1:44:0,44,0:0:0:44,0:1516,0:-136.723,-13.2453,0,-136.723,-13.2453,-136.723	1/1:7:0,7,0:0:0:7,0:247,0:-22.0755,-2.10721,0,-22.0755,-2.10721,-22.0755	1/1:133:0,133,0:0:0:133,0:4638,0:-417.531,-40.037,0,-417.531,-40.037,-417.531	1/1:41:0,40,0:0:0:40,0:1366,0:-122.813,-12.0412,0,-122.813,-12.0412,-122.813	1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chr01	16584766	.	A	G	118489	PASS	AB=0.509449;ABP=4.98001;AC=147;AF=0.781915;AN=188;AO=4455;CIGAR=1X;DP=5722;DPB=5722;DPRA=0;EPP=1321.99;EPPR=254.814;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.8918;MQMR=59.9628;NS=94;NUMALT=1;ODDS=7.97869;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158667;QR=44874;RO=1265;RPL=4451;RPP=9642.21;RPPR=2741.24;RPR=4;RUN=1;SAF=1401;SAP=1334.85;SAR=3054;SRF=440;SRP=257.45;SRR=825;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:13:0,13:0:0:13:460:-41.7354,-3.91339,0	0/1:39:18,21:18:648:21:756:-56.6271,0,-46.9117	1/1:36:1,35:1:36:35:1256:-109.702,-7.23881,0	1/1:37:0,37:0:0:37:1328:-119.8,-11.1381,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:20:0,20:0:0:20:712:-64.4059,-6.0206,0	0/1:44:21,22:21:752:22:760:-55.4121,0,-54.7022	1/1:23:1,22:1:36:22:792:-68.0074,-3.32542,0	0/1:34:17,17:17:587:17:612:-45.1784,0,-42.9188	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:199:0,199:0:0:199:7128:-641.577,-59.905,0	1/1:120:0,120:0:0:120:4249:-382.589,-36.1236,0	0/1:123:61,62:61:2163:62:2195:-160.561,0,-157.419	1/1:63:0,63:0:0:63:2243:-202.133,-18.9649,0	0/1:90:37,53:37:1311:53:1879:-142.294,0,-91.1973	1/1:71:0,70:0:0:70:2499:-224.705,-21.0721,0	1/1:84:1,83:1:36:83:2967:-263.664,-21.6882,0	0/1:68:27,41:27:934:41:1451:-110.415,0,-63.8987	0/1:127:62,65:62:2219:65:2291:-168.216,0,-161.743	0/1:39:26,13:26:932:13:464:-30.3573,0,-72.4587	0/1:45:21,24:21:735:24:860:-64.1755,0,-52.9251	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:40:0,40:0:0:40:1436:-129.538,-12.0412,0	1/1:21:0,21:0:0:21:748:-67.6453,-6.32163,0	0/1:49:26,23:26:932:23:804:-57.92,0,-69.4484	0/1:36:13,23:13:449:23:824:-63.6462,0,-29.9004	1/1:48:0,48:0:0:48:1712:-154.366,-14.4494,0	1/1:37:0,37:0:0:37:1318:-118.693,-11.1381,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:32:0,32:0:0:32:1148:-103.63,-9.63296,0	1/1:36:0,36:0:0:36:1288:-116.224,-10.8371,0	1/1:56:0,56:0:0:56:2016:-181.713,-16.8577,0	0/1:47:29,18:29:1021:18:633:-43.1467,0,-78.0518	1/1:119:0,119:0:0:119:4251:-382.634,-35.8226,0	1/1:96:0,96:0:0:96:3436:-309.453,-28.8989,0	0/1:202:106,96:106:3746:96:3402:-245.587,0,-276.535	0/1:11:7,4:7:252:4:131:-8.80214,0,-19.7176	0/1:199:102,97:102:3635:97:3480:-253.477,0,-267.451	0/1:59:21,38:21:741:38:1360:-104.94,0,-49.2508	0/1:35:19,16:19:671:16:564:-40.5543,0,-50.1797	1/1:98:1,97:1:36:97:3465:-308.407,-25.9027,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:114:1,113:1:27:113:4013:-358.659,-31.6176,0	1/1:71:0,71:0:0:71:2503:-225.447,-21.3731,0	1/1:16:0,16:0:0:16:564:-51.0903,-4.81648,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:23:9,14:9:324:14:500:-38.4125,0,-22.5822	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/1:21:14,7:14:487:7:248:-16.3426,0,-37.8376	1/1:27:1,26:1:32:26:936:-81.3601,-4.9285,0	1/1:63:0,63:0:0:63:2260:-202.395,-18.9649,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:21:0,21:0:0:21:756:-68.3663,-6.32163,0	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:11:0,11:0:0:11:370:-33.6221,-3.31133,0	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	0/1:86:47,39:47:1692:39:1398:-100.231,0,-126.678	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	1/1:106:0,106:0:0:106:3759:-338.505,-31.9092,0	1/1:36:0,36:0:0:36:1288:-116.224,-10.8371,0	1/1:68:0,68:0:0:68:2432:-218.908,-20.47,0	1/1:29:0,29:0:0:29:1036:-93.5539,-8.72987,0	0/0:15:14,1:14:476:1:32:0,-1.31614,-39.9554	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	1/1:166:0,166:0:0:166:5932:-533.987,-49.971,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:112:45,67:45:1612:67:2365:-179.337,0,-111.655	1/1:67:0,67:0:0:67:2380:-214.455,-20.169,0	0/1:13:10,3:10:352:3:104:-5.74297,0,-28.1048	0/1:24:17,7:17:580:7:239:-14.618,0,-45.2947	0/1:44:18,26:18:640:26:908:-68.788,0,-44.684	0/1:38:26,12:26:928:12:423:-26.9659,0,-72.3991	0/1:16:6,10:6:216:10:356:-27.5648,0,-14.974	0/1:31:17,14:17:604:14:491:-35.1892,0,-45.3587	1/1:90:0,90:0:0:90:3228:-290.733,-27.0927,0	0/1:24:10,14:10:360:14:500:-38.1115,0,-25.5196	0/1:22:11,11:11:396:11:387:-28.5433,0,-29.3601	0/1:35:16,19:16:568:19:684:-51.3543,0,-40.9158	0/1:95:43,52:43:1519:52:1864:-139.442,0,-108.405	0/1:67:31,36:31:1108:36:1276:-94.9737,0,-79.862	0/1:125:57,68:57:2027:68:2396:-178.267,0,-145.073	0/1:158:78,80:78:2748:80:2831:-207.463,0,-199.999	0/1:35:19,16:19:676:16:563:-40.4631,0,-50.6319	1/1:76:0,76:0:0:76:2661:-239.737,-22.8783,0	1/1:67:0,67:0:0:67:2384:-214.814,-20.169,0	1/1:324:0,324:0:0:324:11589:-1042.86,-97.5337,0	0/1:239:116,123:116:4144:123:4383:-322.623,0,-301.198	0/1:67:36,31:36:1270:31:1088:-78.0529,0,-94.4323	1/1:89:0,89:0:0:89:3168:-285.343,-26.7917,0	1/1:172:0,172:0:0:172:6086:-547.845,-51.7772,0
chr01	16842889	.	AT	GT,GC	217814	PASS	AB=0.444057,0.554082;ABP=119.873,112.228;AC=148,40;AF=0.787234,0.212766;AN=188;AO=7669,2407;CIGAR=1X1M,2X;DP=10092;DPB=10092;DPRA=0,1.70785;EPP=16656,5229.74;EPPR=13.8677;GTI=1;LEN=1,2;MEANALT=1.69149,2.16667;MQM=59.9446,59.9065;MQMR=60;NS=94;NUMALT=2;ODDS=1.62609;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=273708,85214;QR=170;RO=5;RPL=0,0;RPP=16656,5229.74;RPPR=13.8677;RPR=7669,2407;RUN=1,1;SAF=7669,2407;SAP=16656,5229.74;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:24:0,24,0:0:0:24,0:860,0:-77.7218,-7.22472,0,-77.7218,-7.22472,-77.7218	1/2:127:0,38,89:0:0:38,89:1368,3147:-368.286,-256.662,-245.223,-111.982,0,-85.19	1/1:48:0,48,0:0:0:48,0:1705,0:-153.734,-14.4494,0,-153.734,-14.4494,-153.734	1/1:73:0,73,0:0:0:73,0:2624,0:-236.407,-21.9752,0,-236.407,-21.9752,-236.407	1/1:45:0,44,0:0:0:44,0:1572,0:-141.515,-13.2453,0,-141.515,-13.2453,-141.515	1/1:14:0,14,0:0:0:14,0:485,0:-43.977,-4.21442,0,-43.977,-4.21442,-43.977	1/2:70:0,28,42:0:0:28,42:1008,1480:-203.092,-120.841,-112.412,-82.6075,0,-69.9643	1/1:107:0,106,1:0:0:106,1:3800,36:-341.837,-31.9092,0,-338.899,-28.6119,-338.598	1/2:60:0,28,32:0:0:28,32:1000,1142:-174.828,-93.2982,-84.8694,-81.8865,0,-72.2536	1/1:43:0,43,0:0:0:43,0:1529,0:-137.901,-12.9443,0,-137.901,-12.9443,-137.901	1/1:242:0,242,0:0:0:242,0:8586,0:-772.686,-72.8493,0,-772.686,-72.8493,-772.686	1/1:50:0,50,0:0:0:50,0:1788,0:-161.203,-15.0515,0,-161.203,-15.0515,-161.203	1/2:35:0,24,11:0:0:24,11:852,394:-101.909,-32.4902,-25.2655,-69.7757,0,-66.4643	1/1:52:0,52,0:0:0:52,0:1856,0:-167.32,-15.6536,0,-167.32,-15.6536,-167.32	1/2:31:0,18,13:0:0:18,13:648,468:-91.4198,-38.5463,-33.1277,-53.2333,0,-49.32	1/1:29:0,29,0:0:0:29,0:1023,0:-92.3822,-8.72987,0,-92.3822,-8.72987,-92.3822	1/1:47:0,47,0:0:0:47,0:1688,0:-152.207,-14.1484,0,-152.207,-14.1484,-152.207	1/2:27:0,11,16:0:0:11,16:396,560:-78.2276,-45.9119,-42.6006,-32.6714,0,-27.8549	1/2:168:0,59,109:0:0:59,109:2112,3814:-482.869,-310.636,-292.876,-172.587,0,-139.775	1/2:65:0,26,39:0:0:26,39:924,1348:-185.172,-109.873,-102.046,-75.6509,0,-63.9107	1/2:98:0,47,51:0:0:47,51:1673,1807:-283.91,-147.559,-133.41,-136.707,0,-121.354	1/2:67:0,18,49:0:0:18,49:635,1756:-195.278,-143.574,-138.155,-52.0584,0,-37.308	1/1:51:0,51,0:0:0:51,0:1828,0:-164.801,-15.3525,0,-164.801,-15.3525,-164.801	1/2:64:0,57,7:0:0:57,7:2040,248:-186.916,-20.5572,-3.39849,-166.713,0,-164.606	1/1:29:0,29,0:0:0:29,0:1029,0:-92.9211,-8.72987,0,-92.9211,-8.72987,-92.9211	1/2:164:0,91,72:0:0:91,72:3268,2554:-474.774,-208.184,-180.79,-266.695,0,-245.02	1/2:82:0,37,45:0:0:37,45:1317,1614:-239.339,-132.004,-120.866,-107.692,0,-94.1454	1/1:14:0,14,0:0:0:14,0:500,0:-45.3362,-4.21442,0,-45.3362,-4.21442,-45.3362	1/1:101:1,98,2:1:34:98,2:3480,72:-309.982,-26.7496,0,-304.408,-23.6128,-306.563	1/1:137:0,136,1:0:0:136,1:4838,36:-435.214,-40.9401,0,-432.277,-37.6428,-431.976	1/1:85:0,85,0:0:0:85,0:3017,0:-271.758,-25.5876,0,-271.758,-25.5876,-271.758	1/1:385:0,385,0:0:0:385,0:13773,0:-1239.33,-115.897,0,-1239.33,-115.897,-1239.33	1/1:261:1,257,2:1:36:257,2:9116,72:-816.802,-74.4181,0,-811.228,-71.4624,-813.563	1/2:404:0,132,272:0:0:132,272:4725,9621:-1169.27,-783.955,-744.219,-385.671,0,-303.791	1/1:416:0,412,3:0:0:412,3:14688,108:-1321.33,-124.024,0,-1312.51,-115.13,-1311.61	1/1:255:1,253,1:1:28:253,1:9033,36:-810.087,-73.9818,0,-807.451,-73.1832,-809.368	1/2:123:1,56,66:1:36:56,66:2004,2345:-351.262,-188.143,-174.223,-160.479,0,-143.548	1/2:136:0,84,52:0:0:84,52:3012,1855:-397.242,-151.575,-126.289,-246.024,0,-230.371	1/2:236:0,101,133:0:0:101,133:3620,4725:-680.281,-385.036,-354.632,-295.295,0,-255.258	1/2:160:0,75,84:0:0:75,84:2663,3012:-462.352,-245.373,-222.796,-217.054,0,-191.767	1/2:58:0,28,30:0:0:28,30:1000,1068:-168.931,-87.4008,-78.972,-81.8865,0,-72.8556	1/1:113:0,113,0:0:0:113,0:4021,0:-362.062,-34.0164,0,-362.062,-34.0164,-362.062	1/1:70:0,69,1:0:0:69,1:2476,36:-222.734,-20.7711,0,-219.796,-17.4738,-219.495	1/1:47:0,47,0:0:0:47,0:1673,0:-150.855,-14.1484,0,-150.855,-14.1484,-150.855	1/1:33:0,32,1:0:0:32,1:1129,36:-101.557,-9.63296,0,-98.6191,-6.33572,-98.3181	1/1:38:0,38,0:0:0:38,0:1352,0:-121.976,-11.4391,0,-121.976,-11.4391,-121.976	1/1:35:0,35,0:0:0:35,0:1260,0:-113.705,-10.5361,0,-113.705,-10.5361,-113.705	1/2:108:0,58,50:0:0:58,50:2049,1741:-308.788,-141.918,-124.458,-167.22,0,-152.169	1/2:44:0,19,24:0:0:19,24:680,847:-124.418,-68.9644,-63.2448,-55.4499,0,-48.2252	1/2:82:0,44,38:0:0:44,38:1576,1344:-238.349,-109.819,-96.5735,-128.886,0,-117.447	1/1:75:0,75,0:0:0:75,0:2654,0:-239.104,-22.5773,0,-239.104,-22.5773,-239.104	1/1:239:0,239,0:0:0:239,0:8531,0:-767.786,-71.9462,0,-767.786,-71.9462,-767.786	1/1:60:0,60,0:0:0:60,0:2148,0:-193.584,-18.0618,0,-193.584,-18.0618,-193.584	1/1:33:0,33,0:0:0:33,0:1184,0:-106.868,-9.93399,0,-106.868,-9.93399,-106.868	1/1:285:0,284,1:0:0:284,1:10133,36:-911.202,-85.4925,0,-908.265,-82.1953,-907.964	1/1:64:0,64,0:0:0:64,0:2277,0:-205.191,-19.2659,0,-205.191,-19.2659,-205.191	1/1:30:0,30,0:0: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chr01	18530766	.	T	C	39972	PASS	AB=0.505164;ABP=3.75044;AC=41;AF=0.218085;AN=188;AO=1784;CIGAR=1X;DP=7001;DPB=7001;DPRA=1.44398;EPP=8.6386;EPPR=185.456;GTI=0;LEN=1;MEANALT=1;MQM=52.8531;MQMR=59.6643;NS=94;NUMALT=1;ODDS=0.137813;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63292;QR=186291;RO=5216;RPL=0;RPP=3876.92;RPPR=11320.7;RPR=1784;RUN=1;SAF=858;SAP=8.6386;SAR=926;SRF=2940;SRP=186.56;SRR=2276;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:40:40,0:40:1424:0:0:0,-12.0412,-128.457	0/1:70:37,33:37:1320:33:1176:-83.6851,0,-97.9701	0/0:72:72,0:72:2575:0:0:0,-21.6742,-231.981	0/0:87:87,0:87:3124:0:0:0,-26.1896,-281.363	0/0:57:55,2:55:1955:2:72:0,-10.4165,-169.435	0/0:34:33,1:33:1188:1:36:0,-6.63674,-103.63	0/1:81:32,49:32:1113:49:1749:-132.402,0,-76.0401	0/0:91:91,0:91:3260:0:0:0,-27.3937,-293.592	0/0:81:81,0:81:2882:0:0:0,-24.3834,-258.432	0/0:60:60,0:60:2143:0:0:0,-18.0618,-193.13	0/0:121:120,1:120:4291:1:36:0,-32.8332,-382.748	0/0:151:150,0:150:5344:0:0:0,-45.1545,-480.736	0/1:121:76,45:76:2700:45:1603:-105.137,0,-206.818	0/0:132:132,0:132:4720:0:0:0,-39.736,-424.798	0/1:95:59,36:59:2120:36:1287:-86.6814,0,-162.456	0/0:113:113,0:113:4036:0:0:0,-34.0164,-363.202	0/0:127:127,0:127:4546:0:0:0,-38.2308,-409.048	0/1:62:34,28:34:1215:28:995:-69.077,0,-90.947	0/1:126:61,65:61:2188:65:2316:-168.88,0,-159.228	0/1:96:54,42:54:1936:42:1504:-105.94,0,-145.542	0/1:106:50,56:50:1764:56:1982:-145.156,0,-127.086	0/1:24:10,14:10:356:14:496:-37.5389,0,-25.1532	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/1:67:59,8:59:2120:8:288:-5.82596,0,-170.871	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.818	0/1:107:53,54:53:1887:54:1928:-140.857,0,-137.335	0/1:101:46,55:46:1648:55:1971:-144.087,0,-118.205	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.88	0/0:75:74,1:74:2619:1:36:0,-18.979,-232.331	0/0:37:37,0:37:1324:0:0:0,-11.1381,-118.971	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.963	0/0:15:15,0:15:515:0:0:0,-4.51545,-46.4733	0/0:14:14,0:14:491:0:0:0,-4.21442,-44.5034	1/1:55:5,50:5:176:50:1759:-142.408,-0.371631,0	0/0:13:13,0:13:455:0:0:0,-3.91339,-41.282	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7227	0/1:207:141,66:141:5044:66:2351:-147.103,0,-391.776	0/1:41:16,25:16:576:25:891:-67.0654,0,-39.8328	0/1:141:58,83:58:2071:83:2918:-218.753,0,-144.186	1/1:48:1,47:1:36:47:1661:-146.129,-10.8512,0	0/1:84:41,43:41:1468:43:1535:-110.594,0,-106.411	0/0:82:80,2:80:2846:2:72:0,-18.0985,-249.707	0/0:90:89,1:89:3183:1:36:0,-23.4944,-283.078	0/0:147:147,0:147:5259:0:0:0,-44.2514,-473.333	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.503	0/0:47:46,1:46:1656:1:36:0,-10.5501,-145.723	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.37	0/1:70:25,45:25:888:45:1580:-120.456,0,-59.1669	0/1:46:27,19:27:968:19:671:-46.1883,0,-73.5838	0/1:69:40,29:40:1424:29:1023:-70.7164,0,-106.419	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.676	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:69:69,0:69:2454:0:0:0,-20.7711,-221.086	0/0:25:25,0:25:876:0:0:0,-7.52575,-79.1543	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.217	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.6973	0/0:10:10,0:10:345:0:0:0,-3.0103,-31.3808	1/1:58:2,56:2:72:56:1987:-172.144,-10.623,0	0/0:42:41,1:41:1463:1:36:0,-9.09474,-128.374	0/0:116:115,1:115:4107:1:36:0,-31.3281,-366.117	0/0:9:9,0:9:315:0:0:0,-2.70927,-28.6872	0/0:46:46,0:46:1636:0:0:0,-13.8474,-147.508	0/0:66:66,0:66:2351:0:0:0,-19.868,-211.833	0/1:49:27,22:27:972:22:788:-55.9496,0,-73.0368	0/0:13:13,0:13:459:0:0:0,-3.91339,-41.6379	0/0:82:82,0:82:2931:0:0:0,-24.6845,-263.993	0/0:53:50,3:50:1775:3:108:0,-5.88582,-149.964	0/0:79:79,0:79:2824:0:0:0,-23.7814,-254.382	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.18	0/0:106:106,0:106:3804:0:0:0,-31.9092,-342.433	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:40:19,21:19:684:21:752:-54.9163,0,-49.8491	0/1:51:26,25:26:936:25:887:-63.912,0,-69.1893	0/1:96:46,50:46:1644:50:1796:-130.505,0,-119.337	0/1:69:34,35:34:1220:35:1229:-89.2764,0,-89.3357	0/1:93:54,39:54:1936:39:1392:-95.3919,0,-146.468	0/1:75:34,41:34:1220:41:1455:-106.677,0,-87.5296	0/0:24:24,0:24:847:0:0:0,-7.22472,-76.5487	0/1:67:32,35:32:1144:35:1248:-90.5761,0,-83.1005	0/1:70:38,32:38:1360:32:1144:-80.6329,0,-101.611	0/1:98:37,61:37:1328:61:2155:-161.574,0,-90.1853	0/1:89:50,39:50:1792:39:1374:-95.5494,0,-134.763	0/1:72:44,28:44:1576:28:992:-67.1796,0,-120.451	0/0:118:118,0:118:4215:0:0:0,-35.5215,-379.518	0/1:169:98,71:98:3504:71:2483:-171.132,0,-264.682	0/1:57:29,28:29:1044:28:1004:-72.2362,0,-77.1161	0/0:129:127,2:127:4526:2:72:0,-31.9961,-400.495	0/0:122:122,0:122:4326:0:0:0,-36.7257,-389.443	0/0:113:113,0:113:4051:0:0:0,-34.0164,-364.744	0/1:299:65,234:65:2324:234:8235:-649.867,0,-119.39	0/1:87:29,58:29:1036:58:2075:-159.552,0,-67.3455	0/0:30:30,0:30:1060:0:0:0,-9.0309,-95.7113	0/0:148:147,1:147:5248:1:36:0,-40.9542,-468.596
chr01	19080690	.	AAGTT	CAGTC,CAGTT	1.01938e+06	PASS	AB=0.438254,0.558184;ABP=1323.16,1175.24;AC=94,94;AF=0.5,0.5;AN=188;AO=17471,22252;CIGAR=1X3M1X,1X4M;DP=39865;DPB=39865;DPRA=0,0;EPP=37940.8,48305.2;EPPR=26.8965;GTI=0;LEN=5,1;MEANALT=3.19149,3.19149;MQM=59.9023,59.9132;MQMR=58.7273;NS=94;NUMALT=2;ODDS=73.3135;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=68,0;PQR=0;PRO=0;QA=608926,793331;QR=343;RO=11;RPL=8983,11959;RPP=33.4645,273.864;RPPR=3.20771;RPR=8488,10293;RUN=1,1;SAF=8983,11961;SAP=33.4645,275.166;SAR=8488,10291;SRF=5;SRP=3.20771;SRR=6;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:144:0,99,44:0:0:99,44:3399,1561:-403.273,-127.292,-97.4901,-276.089,0,-262.844	1/2:662:0,239,420:0:0:239,420:8340,15066:-1907.19,-1228.85,-1156.91,-678.405,0,-551.972	1/2:490:0,323,165:0:0:323,165:11146,5936:-1389.84,-484.382,-387.149,-905.523,0,-855.853	1/2:813:0,441,372:0:0:441,372:15196,13281:-2317.4,-1083.08,-950.33,-1234.67,0,-1122.68	1/2:221:0,104,116:0:0:104,116:3605,4137:-629.911,-337.23,-305.922,-292.673,0,-257.754	1/2:354:0,159,194:0:0:159,194:5591,6921:-1019.39,-564.308,-516.444,-455.182,0,-396.782	1/2:784:1,201,578:1:36:201,578:7060,20633:-2253.22,-1679.1,-1621.53,-571.522,0,-400.465	1/2:628:0,395,232:0:0:395,232:13853,8284:-1802.69,-675.37,-556.463,-1127.31,0,-1057.47	1/2:343:0,218,124:0:0:218,124:7546,4417:-972.993,-359.764,-294.139,-613.241,0,-575.914	1/2:331:0,229,99:0:0:229,99:7985,3539:-937.996,-288.589,-219.653,-649.434,0,-619.632	1/2:202:0,129,72:0:0:129,72:4519,2579:-578.021,-210.325,-171.493,-367.691,0,-346.017	1/2:335:1,169,165:1:36:169,165:5884,5863:-952.971,-474.811,-426.875,-475.515,0,-428.783	1/2:251:0,88,163:0:0:88,163:3063,5809:-722.818,-473.757,-447.267,-249.411,0,-200.343	1/2:260:0,179,81:0:0:179,81:6222,2873:-740.281,-234.423,-180.539,-506.21,0,-481.826	1/2:363:1,90,271:1:36:90,271:3129,9647:-1037.36,-783.267,-759.112,-251.446,0,-172.804	1/2:336:0,162,172:0:0:162,172:5701,6124:-963.205,-499.122,-450.355,-464.077,0,-412.3	1/2:239:0,160,79:0:0:160,79:5610,2791:-684.155,-227.634,-179.469,-456.872,0,-433.091	1/2:281:0,78,203:0:0:78,203:2740,7179:-807.995,-584.982,-561.502,-223.365,0,-162.256	1/2:157:0,39,118:0:0:39,118:1357,4185:-451.603,-341.266,-329.526,-110.686,0,-75.1645	1/2:850:0,251,598:0:0:251,598:8773,21332:-2452.31,-1738.67,-1663.11,-713.631,0,-533.615	1/2:542:0,186,355:0:0:186,355:6449,12677:-1557.68,-1033.51,-977.517,-524.216,0,-417.351	1/2:395:0,82,311:0:0:82,311:2871,11120:-1140.32,-906.733,-882.048,-233.612,0,-139.991	1/2:412:0,246,166:0:0:246,166:8653,5926:-1187.84,-483.476,-409.422,-704.718,0,-654.747	1/2:513:0,272,239:0:0:272,239:9496,8529:-1467.66,-695.264,-613.383,-772.39,0,-700.444	1/2:232:0,165,67:0:0:165,67:5694,2380:-656.806,-194.242,-144.572,-462.916,0,-442.747	1/2:1527:0,366,1152:0:0:366,1152:12711,41170:-4389.23,-3356.22,-3246.04,-1033.05,0,-686.263	1/2:708:1,219,484:1:22:219,484:7634,17272:-2026.65,-1406.11,-1341.86,-619.241,0,-475.219	1/2:148:0,96,52:0:0:96,52:3339,1860:-423.493,-152.026,-123.127,-271.821,0,-256.167	1/2:927:0,620,305:0:0:620,305:21596,10893:-2644.24,-888.121,-701.482,-1756.14,0,-1664.32	1/2:580:0,379,199:0:0:379,199:13219,7095:-1653.42,-578.345,-464.254,-1075.07,0,-1015.17	1/2:686:0,423,260:0:0:423,260:14806,9280:-1961.18,-756.577,-629.241,-1204.63,0,-1126.37	1/2:35:0,17,18:0:0:17,18:600,648:-102.089,-53.2333,-48.1158,-49.2119,0,-43.7934	1/2:74:0,24,50:0:0:24,50:840,1784:-214.133,-145.791,-138.567,-68.6937,0,-53.6422	1/2:19:0,4,15:0:0:4,15:140,531:-54.9962,-43.6065,-42.4023,-11.7405,0,-7.22501	1/2:18:0,12,6:0:0:12,6:426,216:-52.6914,-17.9843,-14.372,-35.0652,0,-33.259	1/2:51:0,24,27:0:0:24,27:852,968:-148.729,-79.3096,-72.0848,-69.7759,0,-61.6481	1/2:778:0,253,523:0:0:253,523:8887,18568:-2236.17,-1512.89,-1436.73,-723.295,0,-565.857	1/2:756:0,194,554:0:0:194,554:6748,19761:-2159.16,-1610.57,-1552.17,-548.628,0,-381.858	1/2:248:0,77,171:0:0:77,171:2685,6084:-714.512,-496.146,-472.967,-218.717,0,-167.241	1/2:16:1,2,13:1:22:2,13:72,468:-42.2212,-36.6474,-37.7142,-4.33576,0,-2.05467	1/2:640:0,196,443:0:0:196,443:6767,15818:-1839.33,-1289.56,-1230.56,-549.765,0,-416.408	1/2:185:0,95,90:0:0:95,90:3323,3199:-531.377,-261.04,-232.442,-270.69,0,-243.597	1/2:567:0,348,217:0:0:348,217:12016,7682:-1601.97,-625.735,-520.977,-976.228,0,-910.904	1/2:317:0,213,103:0:0:213,103:7484,3678:-909.033,-299.996,-235.877,-609.17,0,-578.164	1/2:352:0,176,176:0:0:176,176:6121,6240:-1006.39,-508.718,-455.737,-498.022,0,-445.041	1/2:504:2,225,276:2:72:225,276:7895,9841:-1438.18,-796.302,-734.445,-636.631,0,-559.422	1/2:463:0,287,175:0:0:287,175:10018,6223:-1321.85,-507.149,-420.753,-814.718,0,-762.038	1/2:849:0,220,622:0:0:220,622:7661,22197:-2432.48,-1809.51,-1743.29,-622.981,0,-435.741	1/2:593:0,164,426:0:0:164,426:5678,15208:-1701.05,-1239.62,-1190.25,-461.492,0,-333.253	1/2:575:1,200,370:1:35:200,370:6988,13205:-1641.81,-1073.67,-1016.32,-565.597,0,-457.064	1/2:716:0,335,379:0:0:335,379:11601,13556:-2048.22,-1105.42,-1004.57,-942.835,0,-828.745	1/2:12:0,8,4:0:0:8,4:261,144:-33.1618,-12.1095,-9.70126,-21.4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chr01	19905870	.	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chr01	20514794	.	T	G	183613	PASS	AB=0.479106;ABP=19.9788;AC=155;AF=0.824468;AN=188;AO=8593;CIGAR=1X;DP=10938;DPB=10938;DPRA=0;EPP=18662.5;EPPR=5082.09;GTI=3;LEN=1;MEANALT=1.02128;MQM=59.5563;MQMR=59.9723;NS=94;NUMALT=1;ODDS=0.890912;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=306237;QR=83908;RO=2343;RPL=0;RPP=18662.5;RPPR=5082.09;RPR=8593;RUN=1;SAF=0;SAP=18662.5;SAR=8593;SRF=0;SRP=5090.77;SRR=2343;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:55:0,55:0:0:55:1976:-178.104,-16.5567,0	0/1:218:126,92:126:4498:92:3253:-227.284,0,-339.362	1/1:326:0,326:0:0:326:11634:-1046.72,-98.1358,0	1/1:260:0,260:0:0:260:9238:-831.333,-78.2678,0	1/1:108:0,108:0:0:108:3864:-347.915,-32.5112,0	1/1:83:0,83:0:0:83:2942:-264.908,-24.9855,0	0/1:179:88,91:88:3140:91:3209:-235.119,0,-228.939	1/1:249:0,249:0:0:249:8857:-796.718,-74.9565,0	1/1:85:0,85:0:0:85:3043:-274.057,-25.5876,0	1/1:145:0,145:0:0:145:5173:-465.652,-43.6494,0	1/1:44:0,44:0:0:44:1578:-142.311,-13.2453,0	1/1:56:0,56:0:0:56:2000:-180.273,-16.8577,0	0/1:55:27,28:27:964:28:1004:-74.0947,0,-70.5202	1/1:55:0,55:0:0:55:1943:-175.12,-16.5567,0	0/1:32:13,19:13:468:19:669:-50.901,0,-32.8267	1/1:32:0,32:0:0:32:1139:-102.806,-9.63296,0	1/1:51:0,51:0:0:51:1819:-163.791,-15.3525,0	0/1:33:17,16:17:604:16:567:-41.4267,0,-44.7566	0/1:41:23,18:23:828:18:635:-45.1171,0,-62.5019	0/1:323:166,156:166:5944:156:5603:-407.06,0,-437.776	0/1:165:74,91:74:2664:91:3248:-242.815,0,-190.335	0/1:154:104,50:104:3713:50:1784:-114.479,0,-288.012	1/1:50:0,50:0:0:50:1787:-160.856,-15.0515,0	1/1:201:7,194:7:252:194:6918:-599.59,-37.4781,0	1/1:117:0,117:0:0:117:4184:-375.826,-35.2205,0	0/1:336:163,173:163:5852:173:6203:-457.203,0,-425.64	1/1:240:0,240:0:0:240:8524:-766.337,-72.2472,0	1/1:25:0,25:0:0:25:891:-80.3683,-7.52575,0	1/1:322:0,322:0:0:322:11520:-1036.3,-96.9317,0	1/1:165:0,165:0:0:165:5894:-530.523,-49.67,0	1/1:140:0,140:0:0:140:5013:-450.861,-42.1442,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:23:0,23:0:0:23:807:-72.9413,-6.92369,0	0/1:11:3,8:3:108:8:279:-22.0982,0,-6.76384	1/1:11:0,11:0:0:11:392:-35.3826,-3.31133,0	1/1:18:0,18:0:0:18:616:-55.7589,-5.41854,0	0/1:163:91,72:91:3263:72:2564:-181.939,0,-244.822	1/1:238:1,237:1:36:237:8476:-758.86,-68.0469,0	0/1:79:46,33:46:1652:33:1171:-81.8814,0,-125.187	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5581	0/1:214:112,102:112:4024:102:3637:-262.973,0,-297.927	1/1:24:0,24:0:0:24:856:-77.3565,-7.22472,0	1/1:219:0,219:0:0:219:7817:-703.242,-65.9256,0	1/1:38:0,38:0:0:38:1360:-122.698,-11.4391,0	1/1:43:0,43:0:0:43:1516:-136.703,-12.9443,0	1/1:147:0,147:0:0:147:5208:-468.139,-44.2514,0	1/1:204:0,204:0:0:204:7288:-655.893,-61.4101,0	0/1:216:124,92:124:4444:92:3272:-229.636,0,-334.481	0/1:147:75,72:75:2673:72:2580:-188.193,0,-196.563	0/1:162:71,91:71:2548:91:3248:-243.76,0,-180.803	1/1:267:0,267:0:0:267:9490:-853.753,-80.375,0	1/1:14:0,14:0:0:14:504:-45.5677,-4.21442,0	1/1:154:0,154:0:0:154:5515:-496.409,-46.3586,0	1/1:53:0,53:0:0:53:1896:-170.91,-15.9546,0	1/1:32:0,32:0:0:32:1152:-103.957,-9.63296,0	1/1:187:0,187:0:0:187:6620:-595.825,-56.2926,0	1/1:46:0,46:0:0:46:1644:-148.208,-13.8474,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:18:8,10:8:288:10:356:-26.9627,0,-20.8489	1/1:81:0,81:0:0:81:2898:-261.035,-24.3834,0	1/1:92:0,92:0:0:92:3290:-296.218,-27.6948,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:162:0,162:0:0:162:5804:-522.284,-48.7669,0	1/1:231:0,231:0:0:231:8249:-742.236,-69.5379,0	1/1:75:0,75:0:0:75:2649:-238.632,-22.5773,0	1/1:97:0,97:0:0:97:3463:-311.848,-29.1999,0	1/1:194:3,190:3:108:190:6746:-596.874,-48.3834,0	1/1:197:1,196:1:36:196:7000:-626.253,-55.7046,0	1/1:14:0,14:0:0:14:504:-45.6935,-4.21442,0	1/1:138:0,138:0:0:138:4915:-442.43,-41.5421,0	1/1:40:0,40:0:0:40:1417:-127.824,-12.0412,0	1/1:41:0,41:0:0:41:1440:-129.887,-12.3422,0	0/1:158:97,61:97:3476:61:2151:-146.24,0,-265.489	0/1:94:58,36:58:2061:36:1245:-84.0484,0,-157.463	0/1:250:122,128:122:4359:128:4583:-337.35,0,-317.198	1/1:184:1,183:1:36:183:6548:-585.058,-51.7912,0	0/1:248:110,138:110:3940:138:4921:-368.308,0,-280.136	0/1:131:59,72:59:2112:72:2526:-188.114,0,-150.914	1/1:16:0,16:0:0:16:568:-51.4437,-4.81648,0	0/1:131:67,64:67:2392:64:2292:-167.09,0,-176.103	0/1:201:114,87:114:4092:87:3086:-217.451,0,-307.958	0/1:324:145,179:145:5197:179:6384:-477.04,0,-370.333	0/1:73:38,35:38:1356:35:1243:-90.1596,0,-100.365	0/1:27:18,9:18:644:9:324:-21.378,0,-50.1628	1/1:48:0,48:0:0:48:1701:-153.369,-14.4494,0	0/1:89:42,47:42:1508:47:1666:-123.416,0,-109.223	0/1:36:17,19:17:604:19:680:-50.658,0,-43.8535	1/1:48:0,48:0:0:48:1682:-151.279,-14.4494,0	1/1:52:0,52:0:0:52:1851:-166.861,-15.6536,0	1/1:16:0,16:0:0:16:567:-51.3607,-4.81648,0	0/1:103:61,42:61:2196:42:1500:-104.259,0,-166.899	0/1:55:43,12:43:1540:12:423:-21.8484,0,-122.336	1/1:116:0,116:0:0:116:4142:-372.857,-34.9195,0	1/1:73:0,73:0:0:73:2611:-235.23,-21.9752,0
chr01	20514804	.	GCC	ACT,GCT	238516	PASS	AB=0.495573,0.501703;ABP=3.76009,3.12122;AC=155,33;AF=0.824468,0.175532;AN=188;AO=8710,2223;CIGAR=1X1M1X,2M1X;DP=10961;DPB=10961;DPRA=0,1.41515;EPP=18364.7,4675.11;EPPR=5.18177;GTI=2;LEN=3,1;MEANALT=1.68085,2.28205;MQM=59.5402,59.9663;MQMR=60;NS=94;NUMALT=2;ODDS=0.464555;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=307407,78494;QR=36;RO=1;RPL=8646,2205;RPP=18364.7,4675.11;RPPR=5.18177;RPR=64,18;RUN=1,1;SAF=0,0;SAP=18916.5,4830.19;SAR=8710,2223;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:55:0,55,0:0:0:55,0:1961,0:-176.756,-16.5567,0,-176.756,-16.5567,-176.756	1/2:211:1,94,115:1:36:94,115:3311,4040:-595.112,-325.913,-300.554,-266.593,0,-234.912	1/1:330:0,330,0:0:0:330,0:11642,0:-1047.46,-99.3399,0,-1047.46,-99.3399,-1047.46	1/1:265:0,265,0:0:0:265,0:9347,0:-841.041,-79.773,0,-841.041,-79.773,-841.041	1/1:113:0,113,0:0:0:113,0:3997,0:-359.828,-34.0164,0,-359.828,-34.0164,-359.828	1/1:84:0,84,0:0:0:84,0:2972,0:-267.671,-25.2865,0,-267.671,-25.2865,-267.671	1/2:180:0,92,86:0:0:92,86:3223,3014:-507.576,-245.356,-217.661,-262.322,0,-236.434	1/1:257:0,257,0:0:0:257,0:9038,0:-812.203,-77.3647,0,-812.203,-77.3647,-812.203	1/1:86:0,86,0:0:0:86,0:3018,0:-271.808,-25.8886,0,-271.808,-25.8886,-271.808	1/1:148:0,147,0:0:0:147,0:5254,0:-472.761,-44.2514,0,-472.761,-44.2514,-472.761	1/1:44:0,44,0:0:0:44,0:1530,0:-137.988,-13.2453,0,-137.988,-13.2453,-137.988	1/1:57:0,56,1:0:0:56,1:1978,36:-177.934,-16.8577,0,-174.996,-13.5604,-174.695	1/2:54:0,28,26:0:0:28,26:994,904:-154.815,-73.8451,-65.4163,-81.3207,0,-73.4939	1/1:55:0,55,0:0:0:55,0:1932,0:-174.132,-16.5567,0,-174.132,-16.5567,-174.132	1/2:31:0,19,12:0:0:19,12:680,424:-90.3389,-34.8841,-29.1645,-55.8098,0,-52.1974	1/1:34:0,34,0:0:0:34,0:1210,0:-108.998,-10.235,0,-108.998,-10.235,-108.998	1/1:52:0,52,0:0:0:52,0:1827,0:-164.684,-15.6536,0,-164.684,-15.6536,-164.684	1/2:30:0,16,14:0:0:16,14:571,500:-87.6716,-41.1218,-36.3053,-46.9067,0,-42.6923	1/2:41:0,18,23:0:0:18,23:641,828:-120.146,-67.9204,-62.5019,-52.5834,0,-45.6597	1/2:321:0,158,163:0:0:158,163:5603,5759:-925.789,-469.325,-421.762,-456.818,0,-407.75	1/2:166:0,93,73:0:0:93,73:3230,2605:-475.239,-212.722,-184.726,-262.87,0,-240.895	1/2:146:0,51,95:0:0:51,95:1813,3326:-418.702,-270.963,-255.61,-148.093,0,-119.495	1/1:52:0,51,0:0:0:51,0:1794,0:-161.13,-15.3525,0,-161.13,-15.3525,-161.13	1/1:204:0,198,6:0:0:198,6:7021,208:-631.523,-59.6039,0,-614.616,-42.351,-612.81	1/1:116:0,116,0:0:0:116,0:4100,0:-369.139,-34.9195,0,-369.139,-34.9195,-369.139	1/2:337:0,179,157:0:0:179,157:6289,5589:-967.491,-455.659,-401.774,-511.975,0,-464.713	1/1:243:0,241,0:0:0:241,0:8465,0:-760.186,-72.5482,0,-760.186,-72.5482,-760.186	1/1:25:0,25,0:0:0:25,0:875,0:-79.0164,-7.52575,0,-79.0164,-7.52575,-79.0164	1/1:329:0,328,0:0:0:328,0:11620,0:-1045.1,-98.7378,0,-1045.1,-98.7378,-1045.1	1/1:165:0,165,0:0:0:165,0:5872,0:-528.475,-49.67,0,-528.475,-49.67,-528.475	1/1:140:0,140,0:0:0:140,0:4962,0:-446.596,-42.1442,0,-446.596,-42.1442,-446.596	1/1:5:0,5,0:0:0:5,0:178,0:-16.3686,-1.50515,0,-16.3686,-1.50515,-16.3686	1/1:23:0,23,0:0:0:23,0:810,0:-73.2142,-6.92369,0,-73.2142,-6.92369,-73.2142	1/2:11:0,8,3:0:0:8,3:281,93:-30.6472,-7.77364,-5.3654,-23.1946,0,-22.2915	1/1:11:0,11,0:0:0:11,0:374,0:-33.8904,-3.31133,0,-33.8904,-3.31133,-33.8904	1/1:18:0,17,0:0:0:17,0:607,0:-54.649,-5.11751,0,-54.649,-5.11751,-54.649	1/2:162:0,75,87:0:0:75,87:2653,3085:-467.773,-251.689,-229.111,-216.439,0,-190.249	1/1:243:0,241,1:0:0:241,1:8491,36:-763.694,-72.5482,0,-760.756,-69.5709,-760.455	1/2:78:0,33,45:0:0:33,45:1144,1600:-223.692,-130.744,-120.81,-93.2984,0,-79.752	1/2:9:0,1,8:0:0:1,8:36,284:-26.4331,-23.4951,-23.1941,-3.29724,0,-0.889005	1/2:201:0,101,100:0:0:101,100:3566,3527:-577.896,-287.538,-257.134,-290.711,0,-260.608	1/1:24:0,24,0:0:0:24,0:862,0:-77.8977,-7.22472,0,-77.8977,-7.22472,-77.8977	1/1:222:0,222,0:0:0:222,0:7795,0:-701.292,-66.8287,0,-701.292,-66.8287,-701.292	1/1:38:0,38,0:0:0:38,0:1365,0:-123.148,-11.4391,0,-123.148,-11.4391,-123.148	1/1:43:0,43,0:0:0:43,0:1495,0:-134.834,-12.9443,0,-134.834,-12.9443,-134.834	1/1:147:0,146,0:0:0:146,0:5058,0:-454.862,-43.9504,0,-454.862,-43.9504,-454.862	1/1:208:0,207,0:0:0:207,0:7324,0:-658.797,-62.3132,0,-658.797,-62.3132,-658.797	1/2:215:0,96,119:0:0:96,119:3389,4172:-615.149,-339.215,-310.316,-276.285,0,-240.463	1/2:143:0,73,69:0:0:73,69:2569,2434:-407.471,-198.34,-176.365,-209.28,0,-188.509	1/2:159:0,91,68:0:0:91,68:3230,2414:-460.202,-197.043,-169.649,-263.513,0,-243.043	1/1:272:0,271,0:0:0:271,0:9568,0:-860.686,-81.5791,0,-860.686,-81.5791,-860.686	1/1:15:0,15,0:0:0:15,0:535,0:-48.3542,-4.51545,0,-48.3542,-4.51545,-48.3542	1/1:153:0,153,0:0:0:153,0:5415,0:-487.435,-46.0576,0,-487.435,-46.0576,-487.435	1/1:54:0,54,0:0:0:54,0:1914,0:-172.528,-16.2556,0,-172.528,-16.2556,-172.528	1/1:32:0,32,0:0:0:32,0:1147,0:-103.507,-9.63296,0,-103.507,-9.63296,-103.507	1/1:193:0,193,0:0:0:193,0:6759,0:-608.349,-58.0988,0,-608.349,-58.0988,-608.349	1/1:46:0,46,0:0:0:46,0:16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chr01	20542221	.	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chr01	20542252	.	C	A,G	163149	PASS	AB=0.492034,0.507255;ABP=10.7596,9.43761;AC=94,94;AF=0.5,0.5;AN=188;AO=6918,7132;CIGAR=1X,1X;DP=14060;DPB=14060;DPRA=0,0;EPP=15025.3,15490;EPPR=9.52472;GTI=0;LEN=1,1;MEANALT=2.07447,2.07447;MQM=27.0426,27.2486;MQMR=31.6667;NS=94;NUMALT=2;ODDS=118.922;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=247519,254670;QR=108;RO=3;RPL=6918,7132;RPP=15025.3,15490;RPPR=9.52472;RPR=0,0;RUN=1,1;SAF=0,0;SAP=15025.3,15490;SAR=6918,7132;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:38:0,28,10:0:0:28,10:999,356:-75.7088,-20.7014,-12.2725,-55.2657,0,-52.2554	1/2:161:1,89,71:1:36:89,71:3185,2532:-346.205,-146.009,-121.728,-197.948,0,-179.085	1/2:144:0,83,60:0:0:83,60:2949,2141:-290.011,-124.952,-99.966,-165.126,0,-147.065	1/2:248:0,111,137:0:0:111,137:3988,4889:-497.06,-283.729,-250.315,-213.585,0,-172.344	1/2:85:0,37,48:0:0:37,48:1328,1708:-170.972,-100.264,-89.1261,-70.9624,0,-56.513	1/2:81:0,37,44:0:0:37,44:1332,1584:-169.132,-95.0032,-83.8651,-74.3924,0,-61.1471	1/2:171:1,79,91:1:36:79,91:2836,3233:-362.51,-184.24,-162.969,-176.022,0,-151.139	1/2:311:0,128,183:0:0:128,183:4540,6538:-634.048,-383.22,-344.689,-251.085,0,-195.997	1/2:68:0,48,20:0:0:48,20:1714,720:-137.391,-41.9756,-27.5262,-95.6771,0,-89.6565	1/2:190:0,91,99:0:0:91,99:3234,3548:-376.978,-204.047,-176.653,-173.184,0,-143.382	1/2:150:0,79,71:0:0:79,71:2823,2527:-299.501,-147.642,-123.861,-152.114,0,-130.741	1/2:108:0,55,53:0:0:55,53:1976,1896:-220.979,-110.992,-94.4353,-110.247,0,-94.2928	1/2:129:0,60,69:0:0:60,69:2144,2432:-275.512,-143.417,-125.355,-132.367,0,-111.596	1/2:173:0,73,100:0:0:73,100:2620,3592:-350.048,-208.946,-186.97,-141.358,0,-111.255	1/2:102:0,39,63:0:0:39,63:1400,2259:-220.056,-132.049,-120.309,-88.2845,0,-69.3196	1/2:108:0,52,55:0:0:52,55:1864,1954:-212.995,-113.624,-97.9707,-99.4377,0,-82.881	1/2:124:0,52,72:0:0:52,72:1864,2570:-255.093,-150.436,-134.782,-104.918,0,-83.244	1/2:88:0,32,56:0:0:32,56:1144,2016:-191.073,-117.415,-107.782,-73.9391,0,-57.0814	1/2:101:0,55,46:0:0:55,46:1956,1644:-216.416,-95.6944,-79.1378,-120.992,0,-107.144	1/2:187:0,85,101:0:0:85,101:3052,3604:-405.306,-211.368,-185.78,-194.01,0,-163.606	1/2:146:0,62,84:0:0:62,84:2228,3000:-312.879,-174.35,-155.686,-138.803,0,-113.516	1/2:120:0,64,56:0:0:64,56:2281,2008:-268.06,-116.63,-97.3642,-151.709,0,-134.851	1/2:155:0,83,72:0:0:83,72:2974,2545:-307.843,-148.885,-123.9,-159.212,0,-137.538	1/2:175:0,77,98:0:0:77,98:2757,3499:-358.677,-204.415,-181.236,-154.522,0,-125.021	1/2:91:0,71,20:0:0:71,20:2535,720:-175.322,-41.5902,-20.2171,-133.99,0,-127.969	1/2:549:0,291,258:0:0:291,258:10385,9225:-1171.74,-534.506,-446.906,-637.503,0,-559.837	1/2:268:0,130,138:0:0:130,138:4658,4944:-536.264,-287.302,-248.168,-249.218,0,-207.675	1/2:39:0,19,20:0:0:19,20:684,720:-78.2922,-41.7546,-36.0351,-36.7929,0,-30.7723	1/2:350:0,184,166:0:0:184,166:6581,5891:-698.906,-344.839,-289.45,-354.323,0,-304.352	1/2:204:0,108,95:0:0:108,95:3835,3393:-403.107,-197.022,-164.511,-206.075,0,-177.477	1/2:174:0,64,110:0:0:64,110:2277,3948:-352.218,-229.784,-210.518,-122.687,0,-89.574	1/2:11:0,3,8:0:0:3,8:108,288:-22.6791,-16.9265,-16.0234,-6.00425,0,-3.59601	1/2:23:0,14,9:0:0:14,9:504,320:-45.8041,-18.9475,-14.7331,-27.1139,0,-24.4046	1/2:6:0,4,2:0:0:4,2:144,72:-13.5845,-4.43028,-3.22616,-9.42659,0,-8.82453	1/2:18:0,13,5:0:0:13,5:449,180:-36.3083,-10.6784,-6.76502,-25.8914,0,-24.3862	1/2:21:0,6,15:0:0:6,15:216,509:-42.2595,-30.5844,-28.7782,-11.9272,0,-7.41177	1/2:317:0,162,155:0:0:162,155:5802,5526:-681.308,-320.349,-271.582,-361.231,0,-314.572	1/2:310:0,117,192:0:0:117,192:4178,6875:-626.062,-401.715,-366.494,-224.337,0,-166.539	1/2:169:0,84,85:0:0:84,85:3000,3041:-364.558,-177.452,-152.165,-187.379,0,-161.792	1/2:5:0,2,3:0:0:2,3:72,104:-10.9448,-6.44978,-5.84772,-4.76974,0,-3.86665	1/2:197:0,93,104:0:0:93,104:3340,3727:-421.952,-216.888,-188.893,-205.336,0,-174.029	1/2:90:0,32,58:0:0:32,58:1148,2060:-181.142,-120.112,-110.479,-61.282,0,-43.8223	1/2:132:0,72,60:0:0:72,60:2572,2140:-262.499,-124.581,-102.907,-138.174,0,-120.112	1/2:107:0,59,48:0:0:59,48:2113,1724:-214.68,-100.31,-82.5488,-114.628,0,-100.179	1/2:102:0,47,55:0:0:47,55:1688,1967:-206.427,-115.402,-101.254,-91.2815,0,-74.7248	1/2:100:0,66,34:0:0:66,34:2372,1216:-196.988,-70.6266,-50.7586,-126.619,0,-116.384	1/2:149:0,67,82:0:0:67,82:2408,2919:-305.784,-171.24,-151.071,-134.805,0,-110.12	1/2:214:0,100,114:0:0:100,114:3580,4084:-457.083,-236.563,-206.46,-220.792,0,-186.474	1/2:206:0,111,95:0:0:111,95:3976,3363:-444.742,-197.254,-163.84,-247.759,0,-219.161	1/2:188:0,109,79:0:0:109,79:3897,2780:-402.926,-162.477,-129.665,-240.717,0,-216.936	1/2:305:0,142,163:0:0:142,163:5075,5823:-612.385,-339.745,-296.999,-272.895,0,-223.827	1/2:16:0,8,8:0:0:8,8:288,288:-32.0217,-16.7607,-14.3525,-15.515,0,-13.1067	1/2:254:0,115,139:0:0:115,139:4112,4984:-521.005,-291.385,-256.767,-229.88,0,-188.037	1/2:71:0,36,35:0:0:36,35:1284,1250:-141.124,-72.75,-61.9129,-68.6279,0,-58.0919	1/2:31:0,19,12:0:0:19,12:680,432:-63.6208,-2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chr01	20542262	.	TTC	TTT,CTT	188435	PASS	AB=0.743087,0.255448;ABP=2805.93,2839.82;AC=156,32;AF=0.829787,0.170213;AN=188;AO=12687,1415;CIGAR=2M1X,1X1M1X;DP=14123;DPB=14123;DPRA=0,1.30248;EPP=27552.5,3075.64;EPPR=13.8677;GTI=5;LEN=1,3;MEANALT=1.58511,2.225;MQM=26.3195,33.9011;MQMR=54.4;NS=94;NUMALT=2;ODDS=0.268479;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=454328,50292;QR=172;RO=5;RPL=12687,1415;RPP=27552.5,3075.64;RPPR=13.8677;RPR=0,0;RUN=1,1;SAF=0,0;SAP=27552.5,3075.64;SAR=12687,1415;SRF=0;SRP=13.8677;SRR=5;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:40:0,40,0:0:0:40,0:1440,0:-92.243,-12.0412,0,-92.243,-12.0412,-92.243	1/2:163:0,117,46:0:0:117,46:4200,1628:-355.963,-116.457,-81.2368,-239.805,0,-225.957	1/1:143:0,142,0:0:0:142,0:5066,0:-330.09,-42.7463,0,-330.09,-42.7463,-330.09	1/1:247:0,247,0:0:0:247,0:8841,0:-569.295,-74.3544,0,-569.295,-74.3544,-569.295	1/1:86:0,86,0:0:0:86,0:3088,0:-199.168,-25.8886,0,-199.168,-25.8886,-199.168	1/1:83:0,83,0:0:0:83,0:2984,0:-197.842,-24.9855,0,-197.842,-24.9855,-197.842	1/2:173:0,126,47:0:0:126,47:4512,1668:-373.665,-118.434,-80.5039,-255.53,0,-241.381	1/1:314:0,314,0:0:0:314,0:11242,0:-737.295,-94.5234,0,-737.295,-94.5234,-737.295	1/1:66:0,66,0:0:0:66,0:2372,0:-153.155,-19.868,0,-153.155,-19.868,-153.155	1/1:191:0,190,1:0:0:190,1:6771,36:-433.338,-57.1957,0,-430.89,-54.4422,-430.588	1/1:149:0,149,0:0:0:149,0:5340,0:-342.012,-44.8535,0,-342.012,-44.8535,-342.012	1/1:111:0,110,0:0:0:110,0:3938,0:-256.502,-33.1133,0,-256.502,-33.1133,-256.502	1/2:130:0,108,22:0:0:108,22:3872,784:-277.369,-56.3529,-23.8417,-221.323,0,-214.701	1/1:179:1,178,0:1:36:178,0:6388,0:-410.14,-50.2912,0,-410.441,-53.5833,-413.375	1/2:97:0,77,20:0:0:77,20:2764,720:-208.905,-51.4345,-28.2552,-157.776,0,-151.755	1/1:109:0,109,0:0:0:109,0:3900,0:-249.803,-32.8123,0,-249.803,-32.8123,-249.803	1/1:124:0,122,1:0:0:122,1:4376,29:-284.799,-36.7257,0,-282.597,-34.5543,-282.296	1/2:89:0,69,20:0:0:69,20:2476,712:-193.161,-51.0676,-30.2966,-142.397,0,-136.376	1/2:100:0,78,22:0:0:78,22:2792,780:-215.511,-55.9061,-32.4258,-159.908,0,-153.285	1/2:189:0,140,48:0:0:140,48:5008,1706:-406.51,-120.312,-78.168,-286.298,0,-271.849	1/2:149:0,119,30:0:0:119,30:4243,1080:-319.043,-77.2335,-41.4109,-242.116,0,-233.085	1/2:123:0,73,50:0:0:73,50:2620,1765:-275.026,-126.416,-104.441,-148.901,0,-133.849	1/1:157:0,157,0:0:0:157,0:5621,0:-359.371,-47.2617,0,-359.371,-47.2617,-359.371	1/1:174:0,165,9:0:0:165,9:5889,324:-382.735,-49.67,0,-359.981,-26.6045,-357.272	1/1:90:0,90,0:0:0:90,0:3228,0:-200.627,-27.0927,0,-200.627,-27.0927,-200.627	1/2:554:0,426,126:0:0:426,126:15228,4498:-1175.06,-320.929,-192.69,-854.153,0,-816.223	1/1:269:0,269,0:0:0:269,0:9607,0:-617.567,-80.9771,0,-617.567,-80.9771,-617.567	1/1:40:0,40,0:0:0:40,0:1432,0:-92.1699,-12.0412,0,-92.1699,-12.0412,-92.1699	1/1:350:1,349,0:1:36:349,0:12466,0:-799.399,-101.769,0,-799.7,-105.059,-802.632	1/1:208:0,208,0:0:0:208,0:7410,0:-474.993,-62.6142,0,-474.993,-62.6142,-474.993	1/1:175:0,175,0:0:0:175,0:6272,0:-406.731,-52.6803,0,-406.731,-52.6803,-406.731	1/1:11:0,11,0:0:0:11,0:381,0:-25.4039,-3.31133,0,-25.4039,-3.31133,-25.4039	1/1:23:0,23,0:0:0:23,0:824,0:-52.7477,-6.92369,0,-52.7477,-6.92369,-52.7477	1/2:6:0,4,2:0:0:4,2:140,72:-13.5334,-5.45443,-4.25031,-8.37777,0,-7.77571	1/1:18:0,18,0:0:0:18,0:640,0:-42.072,-5.41854,0,-42.072,-5.41854,-42.072	1/1:21:0,21,0:0:0:21,0:752,0:-49.2764,-6.32163,0,-49.2764,-6.32163,-49.2764	1/2:312:0,234,78:0:0:234,78:8389,2779:-668.523,-197.975,-127.534,-470.849,0,-447.368	1/1:312:0,312,0:0:0:312,0:11163,0:-726.673,-93.9214,0,-726.673,-93.9214,-726.673	1/2:166:0,133,33:0:0:133,33:4780,1168:-356.241,-83.9064,-43.8694,-272.639,0,-262.705	1/2:5:0,4,1:0:0:4,1:144,36:-11.0072,-2.88659,-1.68247,-8.42763,0,-8.1266	1/2:201:0,158,42:0:0:158,42:5654,1489:-425.832,-105.683,-58.1199,-320.117,0,-307.474	1/1:90:0,89,1:0:0:89,1:3192,36:-205.291,-26.7917,0,-202.722,-23.9051,-202.421	1/1:136:0,136,0:0:0:136,0:4884,0:-311.303,-40.9401,0,-311.303,-40.9401,-311.303	1/1:103:0,102,0:0:0:102,0:3672,0:-234.022,-30.7051,0,-234.022,-30.7051,-234.022	1/1:98:0,98,0:0:0:98,0:3524,0:-227.682,-29.5009,0,-227.682,-29.5009,-227.682	1/1:101:0,101,0:0:0:101,0:3615,0:-229.313,-30.404,0,-229.313,-30.404,-229.313	1/1:151:1,150,0:1:36:150,0:5366,0:-348.532,-41.8624,0,-348.833,-45.1545,-351.766	1/2:213:0,165,48:0:0:165,48:5924,1700:-453.193,-119.934,-70.2636,-333.558,0,-319.108	1/2:207:0,154,53:0:0:154,53:5528,1885:-446.106,-135.093,-88.7346,-311.314,0,-295.359	1/2:194:0,143,51:0:0:143,51:5128,1813:-416.334,-130.195,-87.1475,-286.439,0,-271.087	1/1:309:0,309,0:0:0:309,0:11045,0:-713.069,-93.0183,0,-713.069,-93.0183,-713.069	1/1:16:0,16,0:0:0:16,0:576,0:-36.8381,-4.81648,0,-36.8381,-4.81648,-36.8381	1/1:251:0,247,3:0:0:247,3:8845,108:-577.462,-74.3544,0,-569.877,-66.764,-568.974	1/1:73:0,73,0:0:0:73,0:2600,0:-166.902,-21.9752,0,-166.902,-21.9752,-166.902	1/1:32:0,32,0:0:0:32,0:1148,0:-75.3259,-9.63296,0,-75.3259,-9.63296,-75.3259	1/1:152:0,152,0:0:0:152,0:5430,0:-350.844,-45.7566,0,-350.844,-45.7566,-350.844	1/1:54:0,54,0:0:0:54,0:1940,0:-124.808,-16.2556,0,-124.808,-16.2556,-124.808	1/1:6:0,6,0:0:0:6,0:212,0:-14.9056,-1.80618,0,-14.9056,-1.80618,-14.9056	1/2:33:0,24,9:0:0:24,9:856,320:-71.3091,-22.9581,-15.7334,-48.6489,0,-45.9396	1/1:137:0,137,0:0:0:137,0:4920,0:-314.537,-41.2411,0,-314.537,-41.2411,-314.537	1/1:259:0,258,1:0:0:258,1:9264,36:-593.715,-77.6657,0,-591.147,-74.7791,-590.846	1/1:10:0,10,0:0:0:10,0:360,0:-22.8631,-3.0103,0,-22.8631,-3.0103,-22.8631	1/1:324:1,323,0:1:28:323,0:11592,0:-736.39,-94.7343,0,-736.691,-97.2327,-738.909	1/1:384:0,384,0:0:0:384,0:13735,0:-883.484,-115.596,0,-883.484,-115.596,-883.484	1/1:160:0,159,0:0:0:159,0:5669,0:-365.438,-47.8638,0,-365.438,-47.8638,-365.438	1/1:116:0,116,0:0:0:116,0:4168,0:-265.743,-34.9195,0,-265.743,-34.9195,-265.743	1/1:237:1,233,3:1:36:233,3:8354,108:-531.362,-67.1937,0,-524.318,-62.8362,-526.348	1/1:148:0,147,1:0:0:147,1:5245,36:-339.469,-44.2514,0,-336.901,-41.3648,-336.6	1/1:66:0,66,0:0:0:66,0:2331,0:-150.519,-19.868,0,-150.519,-19.868,-150.519	1/1:168:0,168,0:0:0:168,0:6020,0:-395.348,-50.573,0,-395.348,-50.573,-395.348	1/1:160:0,160,0:0:0:160,0:5721,0:-368.138,-48.1648,0,-368.138,-48.1648,-368.138	1/1:63:0,63,0:0:0:63,0:2264,0:-143.669,-18.9649,0,-143.669,-18.9649,-143.669	1/2:322:0,230,91:0:0:230,91:8214,3225:-702.988,-230.693,-161.457,-472.247,0,-444.854	1/2:56:0,38,18:0:0:38,18:1356,643:-123.758,-46.3007,-34.8616,-77.7558,0,-72.3373	1/2:245:0,181,64:0:0:181,64:6504,2275:-529.481,-163.238,-108.751,-366.545,0,-347.279	1/1:234:0,234,0:0:0:234,0:8393,0:-538.501,-70.441,0,-538.501,-70.441,-538.501	1/2:213:0,158,55:0:0:158,55:5653,1964:-462.628,-140.49,-92.9271,-322.44,0,-305.884	1/1:154:0,152,0:0:0:152,0:5425,0:-353.175,-45.7566,0,-353.175,-45.7566,-353.175	1/1:20:0,20,0:0:0:20,0:720,0:-46.638,-6.0206,0,-46.638,-6.0206,-46.638	1/2:202:0,139,63:0:0:139,63:5000,2209:-439.547,-158.636,-116.792,-281.207,0,-262.242	1/2:92:0,76,16:0:0:76,16:2728,571:-199.806,-41.4674,-18.5891,-158.648,0,-153.832	1/2:346:0,246,99:0:0:246,99:8832,3499:-749.657,-250.562,-176.508,-499.075,0,-469.273	1/2:192:0,136,54:0:0:136,54:4880,1920:-410.824,-136.383,-95.4426,-274.396,0,-258.14	1/2:97:0,66,31:0:0:66,31:2357,1105:-211.167,-79.0742,-59.2063,-132.39,0,-123.058	1/1:116:0,116,0:0:0:116,0:4164,0:-268.526,-34.9195,0,-268.526,-34.9195,-268.526	1/2:233:0,177,56:0:0:177,56:6360,1998:-502.722,-142.892,-89.6101,-360.132,0,-343.275	1/2:59:0,38,21:0:0:38,21:1353,756:-132.074,-54.2432,-42.8041,-78.1295,0,-71.8079	1/1:104:0,104,0:0:0:104,0:3736,0:-242.282,-31.3071,0,-242.282,-31.3071,-242.282	1/1:107:0,107,0:0:0:107,0:3840,0:-250.397,-32.2102,0,-250.397,-32.2102,-250.397	1/1:169:0,169,0:0:0:169,0:6057,0:-388.776,-50.8741,0,-388.776,-50.8741,-388.776	1/2:217:0,166,51:0:0:166,51:5950,1821:-468.733,-130.94,-80.9695,-338.096,0,-322.744	1/2:83:0,55,28:0:0:55,28:1972,990:-183.246,-71.1853,-54.6287,-112.357,0,-103.928	1/1:127:0,127,0:0:0:127,0:4525,0:-288.791,-38.2308,0,-288.791,-38.2308,-288.791	1/1:137:0,137,0:0:0:137,0:4928,0:-316.979,-41.2411,0,-316.979,-41.2411,-316.979
chr01	20862891	.	AAAG	CAAA,AAAA	500447	PASS	AB=0.536727,0.4624;ABP=83.5601,87.4337;AC=156,32;AF=0.829787,0.170213;AN=188;AO=15501,3222;CIGAR=1X2M1X,3M1X;DP=18752;DPB=18801.5;DPRA=0,1.36948;EPP=33515.5,6921.54;EPPR=0;GTI=0;LEN=4,1;MEANALT=1.87234,2.23214;MQM=48.7677,59.5531;MQMR=0;NS=94;NUMALT=2;ODDS=12.8684;PAIRED=0,0;PAIREDR=0;PAO=76.5,76.5;PQA=2320,2320;PQR=0;PRO=0;QA=541100,114901;QR=0;RO=0;RPL=7116,1565;RPP=228.599,8.71463;RPPR=0;RPR=8385,1657;RUN=1,1;SAF=7133,1574;SAP=216.673,6.70086;SAR=8368,1648;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:186:0,186,0:0:0:186,0:6525,0:-578.471,-55.9916,0,-578.471,-55.9916,-578.471	1/2:201:0,102,99:0:0:102,99:3586,3537:-575.122,-288.732,-258.027,-286.742,0,-256.94	1/1:361:0,361,0:0:0:361,0:12593,0:-1112.79,-108.672,0,-1112.79,-108.672,-1112.79	1/1:479:0,477,2:0:0:477,2:16548,57:-1442.39,-143.591,0,-1437.87,-138.88,-1437.27	1/1:136:0,134,1:0:0:134,1:4718,36:-410.981,-40.338,0,-408.044,-37.4608,-407.743	1/1:98:0,96,2:0:0:96,2:3396,72:-301.553,-28.8989,0,-295.678,-22.7244,-295.076	1/2:219:0,107,112:0:0:107,112:3768,4016:-628.017,-327.708,-295.498,-300.482,0,-266.767	1/1:354:0,353,1:0:0:353,1:12397,36:-1090.12,-106.264,0,-1087.18,-102.966,-1086.88	1/1:292:0,290,2:0:0:290,2:10135,68:-897.489,-87.2987,0,-892.009,-81.571,-891.407	1/1:211:0,210,1:0:0:210,1:7314,21:-641.771,-63.2163,0,-640.183,-61.4174,-639.882	1/1:103:0,103,0:0:0:103,0:3566,0:-308.887,-31.0061,0,-308.887,-31.0061,-308.887	1/1:185:0,184,0:0:0:184,0:6456,0:-571.434,-55.3895,0,-571.434,-55.3895,-571.434	1/2:193:0,89,104:0:0:89,104:3137,3736:-555.529,-305.13,-278.338,-250.751,0,-219.444	1/1:153:0,153,0:0:0:153,0:5375,0:-470.999,-46.0576,0,-470.999,-46.0576,-470.999	1/2:166:0,94,72:0:0:94,72:3284,2576:-471.318,-210.25,-181.953,-261.301,0,-239.627	1/1:129:0,127,1:0:0:127,1:4442,36:-390.422,-38.2308,0,-387.507,-35.4373,-387.206	1/1:108:0,108,0:0:0:108,0:3793,0:-335.756,-32.5112,0,-335.756,-32.5112,-335.756	1/2:79:0,43,36:0:0:43,36:1509,1296:-226.885,-105.808,-92.8633,-121.431,0,-110.594	1/2:57:0,25,32:0:0:25,32:872,1126:-161.701,-91.8657,-84.34,-70.1258,0,-60.4928	1/2:294:0,168,126:0:0:168,126:5915,4486:-835.557,-365.664,-315.091,-469.946,0,-432.016	1/2:366:0,205,159:0:0:205,159:7147,5669:-1031.8,-462.019,-400.308,-569.832,0,-521.969	1/2:172:0,69,103:0:0:69,103:2413,3664:-489.428,-298.781,-278.01,-190.994,0,-159.988	1/1:319:0,318,1:0:0:318,1:11055,36:-964.001,-95.7275,0,-961.064,-92.4303,-960.763	1/1:169:0,164,3:0:0:164,3:5761,108:-510.508,-49.3689,0,-501.695,-40.5376,-500.792	1/1:169:0,169,0:0:0:169,0:5912,0:-521.167,-50.8741,0,-521.167,-50.8741,-521.167	1/2:580:0,313,266:0:0:313,266:10857,9502:-1628.47,-774.448,-680.226,-853.83,0,-773.756	1/1:455:0,454,0:0:0:454,0:15822,0:-1396.48,-136.668,0,-1396.48,-136.668,-1396.48	1/1:58:0,58,0:0:0:58,0:2009,0:-177.914,-17.4597,0,-177.914,-17.4597,-177.914	1/1:514:0,512,2:0:0:512,2:17777,68:-1550.08,-154.127,0,-1544.57,-148.434,-1543.97	1/1:274:0,274,0:0:0:274,0:9631,0:-847.792,-82.4822,0,-847.792,-82.4822,-847.792	1/1:262:0,261,1:0:0:261,1:9044,36:-795.427,-78.5688,0,-792.518,-75.303,-792.217	1/1:14:0,14,0:0:0:14,0:487,0:-43.499,-4.21442,0,-43.499,-4.21442,-43.499	1/1:30:0,30,0:0:0:30,0:1041,0:-90.8492,-9.0309,0,-90.8492,-9.0309,-90.8492	1/2:18:0,11,7:0:0:11,7:386,237:-50.4869,-19.5518,-16.2405,-31.2763,0,-29.1691	1/1:17:0,17,0:0:0:17,0:592,0:-50.6376,-5.11751,0,-50.6376,-5.11751,-50.6376	1/1:19:0,19,0:0:0:19,0:652,0:-57.9718,-5.71957,0,-57.9718,-5.71957,-57.9718	1/2:339:0,170,169:0:0:170,169:5956,6042:-968.29,-492.979,-441.804,-475.662,0,-424.788	1/1:168:0,164,3:0:0:164,3:5641,96:-498.367,-49.3689,0,-491.521,-42.6668,-490.618	1/2:80:0,44,36:0:0:44,36:1521,1292:-223.452,-105.648,-92.4025,-118.093,0,-107.256	1/2:11:0,6,4:0:0:6,4:215,144:-28.9001,-11.8516,-10.0454,-17.1404,0,-15.9363	1/2:276:0,150,126:0:0:150,126:5257,4500:-783.002,-366.971,-321.817,-416.143,0,-378.213	1/1:54:0,54,0:0:0:54,0:1894,0:-167.114,-16.2556,0,-167.114,-16.2556,-167.114	1/1:336:0,333,0:0:0:333,0:11572,0:-1021.26,-100.243,0,-1021.26,-100.243,-1021.26	1/1:128:0,128,0:0:0:128,0:4497,0:-395.795,-38.5318,0,-395.795,-38.5318,-395.795	1/1:126:0,126,0:0:0:126,0:4450,0:-394.389,-37.9298,0,-394.389,-37.9298,-394.389	1/1:236:0,235,0:0:0:235,0:8209,0:-722.663,-70.7421,0,-722.663,-70.7421,-722.663	1/1:244:0,242,0:0:0:242,0:8449,0:-748.13,-72.8493,0,-748.13,-72.8493,-748.13	1/2:362:0,194,168:0:0:194,168:6773,6007:-1025.84,-489.725,-431.326,-536.468,0,-485.895	1/2:194:0,99,95:0:0:99,95:3478,3408:-554.118,-278.3,-248.498,-276.169,0,-247.571	1/2:248:0,116,132:0:0:116,132:4026,4684:-699.242,-381.76,-346.841,-317.648,0,-277.912	1/1:198:0,198,0:0:0:198,0:6933,0:-609.405,-59.6039,0,-609.405,-59.6039,-609.405	1/1:12:0,12,0:0:0:12,0:424,0:-36.9895,-3.61236,0,-36.9895,-3.61236,-36.9895	1/1:301:0,301,0:0:0:301,0:10508,0:-927.781,-90.61,0,-927.781,-90.61,-927.781	1/1:207:0,205,1:0:0:205,1:7147,36:-623.387,-61.7112,0,-620.607,-58.9397,-620.306	1/1:29:0,29,0:0:0:29,0:993,0:-88.5082,-8.72987,0,-88.5082,-8.72987,-88.5082	1/1:345:0,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chr01	20862930	.	C	G	173647	PASS	AB=0.543115;ABP=61.9931;AC=156;AF=0.829787;AN=188;AO=8614;CIGAR=1X;DP=10304;DPB=10304;DPRA=0;EPP=18699.4;EPPR=3651.08;GTI=1;LEN=1;MEANALT=1.06383;MQM=39.3593;MQMR=59.1821;NS=94;NUMALT=1;ODDS=4.18805;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=307247;QR=60143;RO=1680;RPL=8614;RPP=18708.1;RPPR=3651.08;RPR=0;RUN=1;SAF=1;SAP=18699.4;SAR=8613;SRF=0;SRP=3651.08;SRR=1680;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:70:0,70:0:0:70:2504:-215.339,-21.0721,0	0/1:93:34,59:34:1216:59:2120:-156.268,0,-81.7407	1/1:191:0,190:0:0:190:6749:-583.475,-57.1957,0	1/1:296:0,296:0:0:296:10558:-891.761,-89.1049,0	1/1:75:0,75:0:0:75:2668:-226.206,-22.5773,0	1/1:45:0,45:0:0:45:1608:-140.482,-13.5464,0	0/1:90:42,48:42:1508:48:1715:-119.598,0,-108.897	1/1:220:0,220:0:0:220:7842:-676.77,-66.2266,0	1/1:125:0,125:0:0:125:4450:-383.967,-37.6288,0	1/1:124:0,124:0:0:124:4402:-376.413,-37.3277,0	1/1:71:0,71:0:0:71:2528:-214.483,-21.3731,0	1/1:82:0,82:0:0:82:2919:-251.64,-24.6845,0	0/1:80:32,48:32:1148:48:1701:-123.229,0,-79.5449	1/1:100:0,100:0:0:100:3568:-306.858,-30.103,0	0/1:86:41,45:41:1476:45:1604:-111.304,0,-107.192	1/1:68:0,68:0:0:68:2432:-208.409,-20.47,0	1/1:65:0,65:0:0:65:2323:-202.809,-19.567,0	0/1:42:21,21:21:740:21:744:-52.4686,0,-54.1009	0/1:36:23,13:23:828:13:454:-29.0261,0,-63.9173	0/1:118:40,78:40:1419:78:2788:-202.885,0,-92.4646	0/1:191:82,109:82:2911:109:3870:-276.287,0,-203.444	0/1:93:59,34:59:2108:34:1211:-74.6336,0,-161.965	1/1:193:1,192:1:21:192:6829:-577.131,-55.9993,0	1/1:70:5,65:5:180:65:2327:-184.727,-4.84398,0	1/1:91:0,91:0:0:91:3260:-280.955,-27.3937,0	0/1:332:155,177:155:5560:177:6287:-432.974,0,-400.193	1/1:248:0,243:0:0:243:8704:-749.396,-73.1503,0	1/1:21:1,20:1:36:20:716:-57.4072,-2.72846,0	1/1:312:0,312:0:0:312:11156:-944.563,-93.9214,0	1/1:148:0,148:0:0:148:5300:-455.878,-44.5524,0	1/1:139:0,139:0:0:139:4957:-422.802,-41.8432,0	1/1:6:0,6:0:0:6:216:-19.0237,-1.80618,0	1/1:24:0,24:0:0:24:864:-74.398,-7.22472,0	0/1:8:1,7:1:36:7:252:-19.9302,0,-1.19003	1/1:9:0,9:0:0:9:320:-26.2041,-2.70927,0	1/1:12:0,12:0:0:12:432:-37.9396,-3.61236,0	0/1:135:70,65:70:2512:65:2323:-157.706,0,-185.663	1/1:90:0,90:0:0:90:3173:-272.78,-27.0927,0	0/1:39:13,26:13:468:26:918:-65.5556,0,-30.6835	0/1:7:3,4:3:108:4:144:-10.6744,0,-7.16336	0/1:175:84,91:84:3011:91:3247:-225.295,0,-218.512	1/1:30:0,30:0:0:30:1076:-93.3528,-9.0309,0	1/1:172:0,172:0:0:172:6126:-525.855,-51.7772,0	1/1:64:0,64:0:0:64:2275:-194.729,-19.2659,0	1/1:48:0,48:0:0:48:1715:-147.731,-14.4494,0	1/1:108:0,108:0:0:108:3868:-327.992,-32.5112,0	1/1:134:0,134:0:0:134:4772:-415.342,-40.338,0	0/1:192:94,98:94:3364:98:3504:-240.401,0,-244.983	0/1:94:37,57:37:1332:57:2040:-147.26,0,-91.8494	0/1:164:89,75:89:3200:75:2680:-180.008,0,-238.805	1/1:106:0,106:0:0:106:3784:-323.28,-31.9092,0	1/1:10:0,10:0:0:10:360:-31.1548,-3.0103,0	1/1:179:0,179:0:0:179:6389:-553.457,-53.8844,0	1/1:142:0,142:0:0:142:5050:-430.117,-42.7463,0	1/1:15:0,15:0:0:15:536:-47.0363,-4.51545,0	1/1:217:0,217:0:0:217:7714:-660.994,-65.3235,0	1/1:69:0,69:0:0:69:2472:-210.185,-20.7711,0	1/1:16:0,16:0:0:16:567:-49.1975,-4.81648,0	0/1:11:4,7:4:144:7:248:-18.4373,0,-10.0023	1/1:204:0,204:0:0:204:7260:-623.797,-61.4101,0	1/1:72:0,72:0:0:72:2576:-220.16,-21.6742,0	1/1:9:0,9:0:0:9:324:-28.1017,-2.70927,0	1/1:167:0,167:0:0:167:5967:-510.12,-50.272,0	1/1:239:0,239:0:0:239:8542:-729.024,-71.9462,0	1/1:38:0,38:0:0:38:1344:-115.262,-11.4391,0	1/1:115:0,115:0:0:115:4036:-344.006,-34.6185,0	1/1:242:2,240:2:72:240:8570:-717.423,-66.0125,0	1/1:216:4,212:4:140:212:7572:-631.795,-52.0779,0	1/1:64:0,64:0:0:64:2296:-197.574,-19.2659,0	1/1:78:0,77:0:0:77:2752:-237.99,-23.1793,0	1/1:46:0,46:0:0:46:1640:-139.68,-13.8474,0	1/1:32:0,32:0:0:32:1144:-98.2059,-9.63296,0	0/1:121:56,65:56:1997:65:2336:-163.395,0,-143.427	0/1:104:37,67:37:1332:67:2382:-175.864,0,-88.7317	0/1:244:108,136:108:3868:136:4855:-345.198,0,-274.659	1/1:237:0,237:0:0:237:8430:-721.07,-71.3441,0	0/1:171:78,93:78:2785:93:3311:-236.616,0,-199.225	1/1:133:0,133:0:0:133:4767:-412.005,-40.037,0	1/1:19:0,19:0:0:19:680:-58.8754,-5.71957,0	0/1:161:81,80:81:2903:80:2872:-198.625,0,-212.863	0/1:154:65,89:65:2313:89:3162:-226.844,0,-161.651	0/1:266:98,167:98:3508:167:5955:-425.36,0,-235.396	0/1:47:24,23:24:860:23:823:-55.4318,0,-63.5657	0/1:90:37,52:37:1332:52:1853:-129.42,0,-92.983	1/1:57:0,57:0:0:57:2044:-174.501,-17.1587,0	0/1:128:58,70:58:2075:70:2512:-176.636,0,-148.46	0/1:22:13,9:13:468:9:324:-20.7142,0,-35.7912	1/1:55:0,55:0:0:55:1955:-169.605,-16.5567,0	1/1:79:0,79:0:0:79:2823:-243.138,-23.7814,0	1/1:67:0,67:0:0:67:2392:-205.41,-20.169,0	0/1:99:46,53:46:1652:53:1908:-132.746,0,-119.057	0/1:60:42,18:42:1512:18:644:-37.3911,0,-118.265	1/1:167:0,166:0:0:166:5911:-506.117,-49.971,0	1/1:110:0,110:0:0:110:3926:-332.859,-33.1133,0
chr01	20959298	.	C	T	14952.2	PASS	AB=0.491537;ABP=3.89236;AC=29;AF=0.154255;AN=188;AO=710;CIGAR=1X;DP=4686;DPB=4686;DPRA=1.00325;EPP=5.76287;EPPR=1482.01;GTI=0;LEN=1;MEANALT=1;MQM=59.8141;MQMR=59.9645;NS=94;NUMALT=1;ODDS=7.07028;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=24639;QR=141209;RO=3973;RPL=710;RPP=1544.76;RPPR=8630.27;RPR=0;RUN=1;SAF=370;SAP=5.76287;SAR=340;SRF=1164;SRP=1482.01;SRR=2809;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:27:27,0:27:948:0:0:0,-8.12781,-85.6319	0/1:19:11,8:11:396:8:288:-20.5474,0,-30.2632	0/0:65:65,0:65:2291:0:0:0,-19.5669,-206.447	0/0:33:33,0:33:1157:0:0:0,-9.93399,-104.434	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:25:20,5:20:669:5:180:-9.02631,0,-52.9947	0/0:59:58,1:58:2034:1:36:0,-14.2246,-179.756	0/0:46:45,1:45:1604:1:36:0,-10.2491,-141.052	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:127:127,0:127:4525:0:0:0,-38.2308,-407.418	0/0:55:54,0:54:1902:0:0:0,-16.2556,-171.133	0/1:74:25,49:25:892:49:1633:-124.967,0,-58.3235	0/0:40:40,0:40:1394:0:0:0,-12.0412,-125.756	0/1:66:29,37:29:1013:37:1297:-97.1526,0,-71.6114	0/0:48:48,0:48:1705:0:0:0,-14.4494,-153.734	0/0:35:35,0:35:1222:0:0:0,-10.536,-110.28	0/1:26:16,10:16:564:10:351:-24.0999,0,-43.2635	0/1:74:52,22:52:1833:22:698:-40.8358,0,-142.972	0/1:38:19,19:19:669:19:657:-48.0104,0,-49.0948	0/1:41:20,21:20:716:21:720:-52.748,0,-52.4255	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.27	0/0:25:23,2:23:804:2:72:0,-0.689027,-65.8398	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:43:22,21:22:792:21:752:-55.062,0,-58.6614	0/0:69:68,1:68:2417:1:36:0,-17.1728,-214.187	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/0:61:61,0:61:2176:0:0:0,-18.3628,-196.107	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:35:35,0:35:1218:0:0:0,-10.536,-109.919	0/0:119:119,0:119:4229:0:0:0,-35.8226,-380.789	0/0:110:110,0:110:3960:0:0:0,-33.1133,-356.589	0/0:98:95,3:95:3393:3:100:0,-20.1705,-296.245	0/0:126:126,0:126:4509:0:0:0,-37.9298,-405.976	0/0:99:99,0:99:3537:0:0:0,-29.802,-318.531	0/1:134:55,79:55:1932:79:2786:-210.638,0,-133.816	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/1:74:55,19:55:1972:19:671:-38.4378,0,-155.479	0/0:28:26,2:26:936:2:68:0,-1.97113,-78.1018	0/1:39:17,22:17:612:22:746:-55.7098,0,-43.6733	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.332	0/0:39:39,0:39:1392:0:0:0,-11.7402,-125.579	0/0:24:24,0:24:834:0:0:0,-7.22472,-75.3756	0/0:31:31,0:31:1100:0:0:0,-9.33193,-99.3103	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8379	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/1:49:20,29:20:720:29:1017:-77.087,0,-50.3783	0/1:17:4,13:4:140:13:406:-31.7222,0,-7.82707	0/1:34:18,16:18:629:16:553:-39.859,0,-46.6988	0/0:34:33,1:33:1171:1:36:0,-6.63674,-101.077	0/0:95:95,0:95:3385:0:0:0,-28.5978,-304.865	0/0:38:38,0:38:1355:0:0:0,-11.4391,-122.25	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.3013	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.229	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:103:103,0:103:3673:0:0:0,-31.0061,-330.773	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:22:22,0:22:773:0:0:0,-6.62266,-69.8895	0/0:24:24,0:24:828:0:0:0,-7.22472,-74.8333	0/0:73:72,1:72:2584:1:36:0,-18.3769,-229.211	0/0:55:55,0:55:1961:0:0:0,-16.5566,-176.763	0/0:40:40,0:40:1413:0:0:0,-12.0412,-127.465	0/0:25:25,0:25:883:0:0:0,-7.52575,-79.7875	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:50:50,0:50:1747:0:0:0,-15.0515,-157.508	0/0:34:34,0:34:1205:0:0:0,-10.235,-108.754	0/0:125:125,0:125:4483:0:0:0,-37.6287,-403.638	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/0:89:88,0:88:3141:0:0:0,-26.4906,-282.526	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.8309	0/1:33:17,16:17:612:16:516:-36.8086,0,-45.4794	0/1:58:32,26:32:1100:26:917:-65.3833,0,-81.8436	0/0:48:47,1:47:1684:1:36:0,-10.8512,-148.249	0/1:36:20,16:20:720:16:530:-37.175,0,-54.2917	0/0:45:45,0:45:1571:0:0:0,-13.5463,-141.677	0/0:189:189,0:189:6738:0:0:0,-56.8947,-606.494	0/1:38:23,15:23:816:15:521:-35.7772,0,-62.3226	0/1:22:10,12:10:351:12:417:-31.2376,0,-25.304	0/1:49:20,29:20:712:29:1009:-76.3678,0,-49.6562	0/1:50:18,32:18:640:32:1107:-84.8737,0,-42.8778	0/1:45:12,33:12:423:33:1176:-92.5991,0,-24.8587	0/0:20:20,0:20:708:0:0:0,-6.0206,-64.0456	0/1:106:46,60:46:1620:60:2122:-159.327,0,-114.177	0/1:17:8,9:8:273:9:316:-23.6613,0,-19.7827	0/0:31:31,0:31:1082:0:0:0,-9.33193,-97.6872	0/0:42:42,0:42:1499:0:0:0,-12.6433,-135.204	0/0:127:126,0:126:4488:0:0:0,-37.9298,-403.696	0/1:154:115,39:115:4117:39:1382:-78.3193,0,-324.353	0/1:38:5,33:5:176:33:1163:-93.537,0,-4.74588	0/0:31:31,0:31:1089:0:0:0,-9.33193,-98.3173	0/0:45:45,0:45:1584:0:0:0,-13.5463,-142.848
chr01	21669092	.	TTG	CTA	5505	PASS	AB=0.206711;ABP=3476.49;AC=81;AF=0.430851;AN=188;AO=993;CIGAR=1X1M1X;DP=5127;DPB=5127;DPRA=3.33245;EPP=2159.28;EPPR=8975.53;GTI=34;LEN=3;MEANALT=1.02247;MQM=47.1208;MQMR=52.2137;NS=94;NUMALT=1;ODDS=0.295212;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=35217;QR=145647;RO=4132;RPL=0;RPP=2159.28;RPPR=8975.53;RPR=993;RUN=1;SAF=993;SAP=2159.28;SAR=0;SRF=4132;SRP=8975.53;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:12:10,2:10:360:2:70:-3.03497,0,-28.6928	0/1:41:32,9:32:1114:9:320:-15.511,0,-87.8358	0/1:45:38,7:38:1336:7:245:-8.71281,0,-106.336	0/1:123:97,26:97:3391:26:921:-45.6973,0,-263.637	0/1:19:13,6:13:458:6:216:-13.9343,0,-35.5715	0/0:9:9,0:9:313:0:0:0,-2.70927,-28.4988	0/1:48:41,7:41:1447:7:250:-7.45005,0,-114.939	0/1:36:31,5:31:1088:5:171:-4.88837,0,-87.1722	0/1:32:24,8:24:833:8:279:-15.8146,0,-65.6281	0/1:49:42,7:42:1468:7:252:-7.50633,0,-116.179	0/1:57:51,6:51:1802:6:216:-2.49518,0,-142.349	0/1:81:66,15:66:2299:15:530:-23.6483,0,-182.628	0/1:68:50,18:50:1775:18:610:-30.9935,0,-138.883	0/1:44:36,8:36:1288:8:288:-12.861,0,-101.125	0/1:71:59,12:59:2101:12:413:-13.5024,0,-165.635	0/0:31:29,2:29:1023:2:72:0,-2.5424,-85.0611	0/1:26:15,11:15:538:11:392:-27.7935,0,-40.904	0/1:22:16,6:16:554:6:216:-10.5735,0,-43.5479	0/1:23:13,10:13:464:10:360:-20.3486,0,-35.0592	0/1:56:47,9:47:1670:9:324:-11.8991,0,-131.262	0/1:101:89,12:89:3130:12:424:-6.90527,0,-249.007	0/1:45:39,6:39:1381:6:216:-4.19467,0,-109.031	0/0:34:31,3:31:1082:3:108:0,-0.229404,-86.9757	0/1:16:13,3:13:466:3:108:-5.18914,0,-37.07	0/0:28:28,0:28:966:0:0:0,-8.42884,-85.2598	0/1:127:99,28:99:3467:28:957:-44.692,0,-269.477	0/1:112:90,22:90:3193:22:784:-36.7109,0,-252.32	0/1:43:37,6:37:1324:6:216:-6.7096,0,-105.837	0/1:144:126,18:126:4451:18:646:-11.8808,0,-352.388	0/0:45:41,4:41:1462:4:136:0,-1.04032,-118.226	0/1:44:39,5:39:1384:5:180:-3.19248,0,-110.443	0/1:13:7,6:7:244:6:204:-14.5676,0,-18.1336	0/1:31:23,8:23:817:8:288:-16.7887,0,-63.9514	0/1:17:12,5:12:430:5:180:-10.3937,0,-33.8975	0/1:12:9,3:9:312:3:103:-5.99754,0,-24.7957	0/1:9:5,4:5:169:4:144:-10.6043,0,-12.8286	0/1:249:209,40:209:7390:40:1416:-47.7636,0,-579.252	0/1:43:38,5:38:1356:5:180:-3.49351,0,-108.013	0/1:39:29,10:29:1012:10:360:-17.5418,0,-79.2501	0/1:12:4,8:4:134:8:288:-21.8617,0,-8.6544	0/1:108:78,30:78:2764:30:1080:-62.0076,0,-214.319	0/1:38:27,11:27:933:11:394:-24.1221,0,-71.7879	0/1:57:45,12:45:1569:12:430:-21.3921,0,-120.281	0/1:68:54,14:54:1907:14:502:-24.7399,0,-149.421	0/1:59:51,8:51:1825:8:277:-7.35144,0,-143.811	0/1:48:43,5:43:1525:5:180:-1.87373,0,-122.146	0/1:28:25,3:25:867:3:108:-0.325548,0,-69.9063	0/1:67:53,14:53:1879:14:496:-23.5785,0,-147.224	0/0:61:56,5:56:1974:5:175:0,-2.84586,-159.887	0/1:62:49,13:49:1736:13:468:-21.6412,0,-136.321	0/1:41:34,7:34:1211:7:252:-10.3683,0,-95.6255	0/0:20:19,1:19:672:1:36:0,-2.44717,-56.5872	0/1:81:68,13:68:2427:13:465:-17.1643,0,-193.346	0/0:17:17,0:17:598:0:0:0,-5.11751,-53.9037	0/1:5:3,2:3:106:2:64:-4.57295,0,-8.38395	0/1:97:78,19:78:2700:19:682:-31.8542,0,-211.161	0/1:19:17,2:17:598:2:72:-1.06996,0,-47.9669	0/1:8:6,2:6:214:2:72:-4.33394,0,-17.019	0/1:16:12,4:12:414:4:142:-7.67114,0,-32.4496	0/1:43:31,12:31:1101:12:421:-24.6691,0,-85.7919	0/0:142:129,13:129:4500:13:457:0,-1.90125,-360.556	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.4712	0/1:184:156,28:156:5563:28:998:-33.5435,0,-440.477	0/1:62:48,14:48:1683:14:500:-26.3011,0,-132.079	0/1:33:28,5:28:954:5:180:-6.51581,0,-74.8103	0/0:41:38,3:38:1322:3:98:0,-3.25597,-109.111	0/1:45:38,7:38:1336:7:242:-8.45041,0,-105.21	0/1:55:47,8:47:1668:8:284:-9.11182,0,-132.035	0/1:26:20,6:20:704:6:214:-11.6526,0,-54.5928	0/1:19:14,5:14:491:5:180:-10.8325,0,-38.781	0/1:83:61,22:61:2155:22:784:-42.3879,0,-166.792	0/0:19:17,1:17:601:1:36:0,-2.20245,-50.1609	0/1:47:33,14:33:1167:14:483:-28.537,0,-91.1148	0/1:34:25,9:25:887:9:312:-7.57658,0,-69.3761	0/1:61:54,6:54:1860:6:216:-1.36104,0,-148.453	0/1:109:85,24:85:2999:24:860:-44.4139,0,-235.761	0/1:20:13,7:13:435:7:245:-16.3632,0,-33.3718	0/1:32:21,11:21:732:11:394:-26.1685,0,-56.541	0/1:23:13,10:13:466:10:336:-23.6383,0,-35.3464	0/1:63:46,17:46:1634:17:605:-34.0509,0,-127.935	0/1:25:18,7:18:620:7:252:-10.7535,0,-48.5774	0/1:85:69,16:69:2446:16:576:-23.4176,0,-192.686	0/1:121:91,30:91:3208:30:1048:-53.044,0,-248.608	0/1:47:35,12:35:1246:12:432:-23.4072,0,-96.8744	0/1:28:21,7:21:749:7:252:-13.9786,0,-58.521	0/1:107:81,26:81:2882:26:932:-44.6096,0,-225.019	0/1:26:20,6:20:707:6:214:-10.4838,0,-56.0717	0/1:66:53,13:53:1860:13:468:-22.5917,0,-146.646	0/1:48:38,10:38:1344:10:350:-17.2798,0,-106.758	0/0:25:25,0:25:879:0:0:0,-7.52575,-79.2017	0/1:93:76,17:76:2696:17:610:-23.2259,0,-211.888	0/1:67:42,25:42:1477:25:883:-53.2437,0,-111.005	0/1:178:126,52:126:4411:52:1848:-109.098,0,-339.807	0/1:107:92,15:92:3237:15:529:-15.4657,0,-256.011
chr01	21669106	.	ATCTTTTA	ATTGTTTA,GTCTCTTG,GTCTCTTA	10475.3	PASS	AB=0.217472,0.095438,0.0965564;ABP=3376.05,7793.51,4190.61;AC=59,21,6;AF=0.31383,0.111702,0.0319149;AN=188;AO=1060,533,292;CIGAR=2M2X4M,1X3M1X2M1X,1X3M1X3M;DP=6054;DPB=6054.88;DPRA=1.84013,2.34375,1.69798;EPP=2296.09,1151.74,619.827;EPPR=2715.25;GTI=30;LEN=2,8,8;MEANALT=2.6,2.30682,2.80488;MQM=47.4028,45.0263,45.0582;MQMR=55.3987;NS=94;NUMALT=3;ODDS=0.501543;PAIRED=0,0,0;PAIREDR=0;PAO=0,0,0;PQA=0,0,0;PQR=36;PRO=1;QA=37781,18693,10283;QR=145016;RO=4151;RPL=1,532,290;RPP=2296.09,1151.74,619.827;RPPR=2715.25;RPR=1059,1,2;RUN=1,1,1;SAF=1060,533,292;SAP=2304.77,1160.41,637.08;SAR=0,0,0;SRF=4151;SRP=9016.79;SRR=0;TYPE=mnp,complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/0:23:22,0,1,0:22:773:0,1,0:0,36,0:0,-6.62266,-69.165,-3.32912,-66.2304,-65.9294,-6.62266,-69.165,-66.2304,-69.165	0/2:41:33,0,8,0:33:1142:0,8,0:0,285,0:-13.6335,-23.5675,-114.727,0,-91.5121,-89.1039,-23.5675,-114.727,-91.5121,-114.727	0/3:55:43,0,0,11:43:1469:0,0,11:0,0,395:-19.3503,-32.2946,-151.11,-32.2946,-151.11,-151.11,0,-118.92,-118.92,-115.609	0/1:124:79,24,8,12:79:2730:24,8,12:853,280,431:-44.9105,0,-212.421,-46.594,-197.546,-263.826,-34.6762,-185.63,-232.219,-250.705	0/1:28:21,5,1,1:21:746:5,1,1:180,35,36:-8.19173,0,-59.1719,-11.7122,-57.8748,-72.0827,-11.6319,-57.7956,-69.5023,-72.0035	0/2:15:13,0,2,0:13:451:0,2,0:0,69,0:-2.03218,-5.94557,-42.6078,0,-37.0071,-36.4051,-5.94557,-42.6078,-37.0071,-42.6078	0/1:48:20,23,5,0:20:669:23,5,0:822,179,0:-60.2898,0,-46.5068,-52.2239,-39.3394,-104.151,-66.3104,-53.4304,-105.656,-119.745	0/2:56:41,0,10,5:41:1426:0,10,5:0,339,180:-15.1067,-27.449,-143.277,0,-115.816,-112.806,-12.7716,-128.606,-101.145,-127.101	0/3:32:26,0,1,5:26:906:0,1,5:0,36,172:-6.11379,-13.9406,-87.6179,-11.0038,-84.6834,-84.3824,0,-73.6649,-70.7304,-72.1597	0/1:49:28,15,5,0:28:978:15,5,0:536,174,0:-34.7829,0,-74.4744,-29.5187,-65.2953,-106.986,-43.2118,-78.9898,-108.491,-122.185	0/2:57:32,8,10,7:32:1115:8,10,7:286,351,240:-17.0782,-3.65695,-91.7182,0,-67.4128,-87.4511,-7.82378,-75.2385,-71.5743,-96.18	0/2:80:55,0,25,0:55:1922:0,25,0:0,885,0:-55.7498,-72.3065,-228.64,0,-156.685,-149.16,-72.3065,-228.64,-156.685,-228.64	0/3:68:49,0,8,11:49:1694:0,8,11:0,280,396:-17.5301,-32.2806,-164.319,-9.52406,-141.557,-139.148,0,-132.04,-109.277,-128.728	0/1:44:20,15,4,5:20:709:15,4,5:529,143,180:-36.547,0,-52.3716,-31.1203,-45.4398,-86.8051,-28.1593,-42.479,-73.6013,-83.5435	0/1:72:47,16,8,0:47:1660:16,8,0:561,283,0:-31.1662,0,-127.234,-23.6341,-110.367,-153.267,-45.3146,-132.05,-155.675,-177.359	0/1:31:16,9,1,5:16:563:9,1,5:324,36,179:-21.3665,0,-43.0856,-23.3016,-42.9133,-68.794,-11.8559,-31.4663,-54.7668,-56.1431	0/2:27:20,0,7,0:20:702:0,7,0:0,251,0:-14.787,-20.8076,-77.9319,0,-57.4805,-55.3733,-20.8076,-77.9319,-57.4805,-77.9319	0/2:22:16,0,3,3:16:570:0,3,3:0,105,96:-3.73311,-8.54959,-52.4645,0,-43.9279,-43.0248,-0.835007,-44.7378,-36.2014,-43.8347	0/2:22:18,0,4,0:18:639:0,4,0:0,140,0:-6.31026,-11.7288,-58.715,0,-47.331,-46.1269,-11.7288,-58.715,-47.331,-58.715	0/1:71:41,23,7,0:41:1427:23,7,0:815,252,0:-53.5152,0,-108.227,-46.9529,-96.244,-159.983,-65.8574,-115.151,-162.09,-180.997	0/1:148:94,35,7,12:94:3289:35,7,12:1256,247,413:-73.2753,0,-255.945,-83.185,-248.092,-347.544,-68.6112,-233.518,-316.689,-331.466	0/1:66:38,17,11,0:38:1339:17,11,0:610,383,0:-37.8636,0,-101.584,-19.1543,-76.5475,-122.531,-49.3028,-106.701,-125.843,-155.996	0/1:34:19,12,3,0:19:657:12,3,0:421,102,0:-28.2257,0,-49.6367,-25.9038,-45.2062,-78.2365,-33.9453,-53.2491,-79.1395,-87.183	0/2:16:10,1,4,1:10:348:1,4,1:36,143,36:-8.49154,-8.59966,-36.4542,0,-25.2506,-26.949,-8.62035,-33.8734,-25.2711,-36.4746	0/1:28:13,10,5,0:13:436:10,5,0:360,175,0:-25.2418,0,-30.7843,-15.1572,-19.7863,-47.443,-29.1551,-33.7946,-48.9481,-62.9515	0/1:192:133,37,7,13:133:4648:37,7,13:1314,251,445:-66.1438,0,-361.719,-86.4298,-353.106,-457.172,-71.0994,-337.773,-424.195,-440.033	0/1:112:73,32,0,6:73:2557:32,0,6:1150,0,215:-70.8087,0,-197.706,-92.7839,-207.339,-300.122,-75.5744,-190.128,-282.912,-281.106	0/1:43:26,11,5,0:26:915:11,5,0:396,170,0:-24.1035,0,-71.0667,-18.3681,-60.8123,-91.2274,-31.9302,-74.378,-92.7325,-106.299	0/1:197:126,30,14,27:126:4411:30,14,27:1076,488,950:-49.1393,0,-346.157,-48.548,-316.666,-399.516,-12.1115,-280.228,-328.77,-359.165	0/1:87:61,14,6,6:61:2131:14,6,6:493,209,210:-21.3,0,-169.071,-22.9514,-156.574,-194.428,-22.915,-156.538,-179.486,-194.392	0/1:44:29,6,5,4:29:1025:6,5,4:216,178,143:-8.68466,0,-81.5728,-3.40262,-69.3656,-85.2714,-6.1596,-72.1234,-75.5211,-88.3302	0/0:24:20,2,1,1:20:681:2,1,1:61,35,36:0,-1.1602,-55.3302,-3.212,-53.1293,-57.708,-3.13024,-53.0501,-55.1267,-57.6288	0/1:51:38,8,5,0:38:1324:8,5,0:277,174,0:-10.8188,0,-105.146,-8.34835,-93.6452,-114.397,-22.258,-107.554,-115.902,-129.811	0/2:16:9,0,7,0:9:313:0,7,0:0,243,0:-17.3702,-20.0795,-45.5286,0,-25.7962,-23.689,-20.0795,-45.5286,-25.7962,-45.5286	0/2:14:12,0,2,0:12:415:0,2,0:0,72,0:-2.61526,-6.22762,-39.9387,0,-34.0685,-33.4665,-6.22762,-39.9387,-34.0685,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chr01	21669114	.	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chr01	25424131	.	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chr01	25424140	.	A	G	37799.9	PASS	AB=0.508394;ABP=5.70789;AC=36;AF=0.191489;AN=188;AO=2254;CIGAR=1X;DP=10564;DPB=10564;DPRA=1.21562;EPP=4897.51;EPPR=18045.8;GTI=1;LEN=1;MEANALT=1.02273;MQM=59.5839;MQMR=59.9279;NS=94;NUMALT=1;ODDS=1.11594;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80312;QR=294277;RO=8309;RPL=0;RPP=4897.51;RPPR=18045.8;RPR=2254;RUN=1;SAF=2254;SAP=4897.51;SAR=0;SRF=8309;SRP=18045.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:86:86,0:86:3060:0:0:0,-25.8886,-275.631	0/1:84:40,44:40:1424:44:1580:-117.198,0,-103.171	0/0:351:351,0:351:12483:0:0:0,-105.662,-1123.29	0/0:288:288,0:288:10231:0:0:0,-86.6966,-920.486	0/1:111:59,52:59:2112:52:1868:-134.982,0,-156.934	0/1:42:22,20:22:776:20:699:-50.5797,0,-57.5189	0/1:101:51,50:51:1797:50:1779:-129.878,0,-131.606	0/0:113:112,1:112:3977:1:36:0,-30.4181,-354.524	0/0:127:127,0:127:4517:0:0:0,-38.2308,-406.698	0/0:70:70,0:70:2459:0:0:0,-21.0721,-221.56	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.909	0/0:74:74,0:74:2640:0:0:0,-22.2762,-237.22	0/1:62:36,26:36:1258:26:928:-65.1726,0,-94.8544	0/0:34:33,1:33:1176:1:36:0,-6.63674,-102.549	0/1:45:27,18:27:960:18:648:-45.0955,0,-73.1699	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.931	0/0:36:36,0:36:1272:0:0:0,-10.8371,-114.783	0/1:32:16,16:16:557:16:564:-41.454,0,-40.8226	0/1:19:9,10:9:324:10:360:-27.0247,0,-23.7863	0/1:259:117,142:117:4112:142:5077:-379.075,0,-292.292	0/1:139:64,75:64:2280:75:2654:-197.256,0,-163.596	0/1:244:77,167:77:2722:167:5988:-465.296,0,-171.664	0/0:160:160,0:160:5623:0:0:0,-48.1648,-506.188	0/0:100:97,3:97:3411:3:104:0,-20.4002,-297.499	0/0:125:125,0:125:4426:0:0:0,-37.6287,-398.435	0/1:240:149,91:149:5268:91:3202:-216.1,0,-401.903	0/0:329:329,0:329:11635:0:0:0,-99.0389,-1046.95	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/1:274:100,174:100:3510:174:6226:-477.811,0,-233.625	0/0:169:169,0:169:5978:0:0:0,-50.8741,-538.129	0/0:102:102,0:102:3632:0:0:0,-30.7051,-327.084	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.3154	0/1:8:3,5:3:104:5:180:-14.1438,0,-7.29457	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6048	0/1:168:88,80:88:3152:80:2844:-205.576,0,-233.329	0/0:131:131,0:131:4665:0:0:0,-39.4349,-419.941	0/1:45:19,26:19:680:26:928:-70.2208,0,-47.9828	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:159:82,77:82:2901:77:2752:-199.828,0,-213.458	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:328:328,0:328:11629:0:0:0,-98.7378,-1046.48	0/0:45:45,0:45:1588:0:0:0,-13.5463,-143.21	0/0:48:47,1:47:1676:1:36:0,-10.8512,-147.522	0/0:156:156,0:156:5459:0:0:0,-46.9607,-491.331	0/0:187:187,0:187:6658:0:0:0,-56.2926,-599.299	0/1:197:102,95:102:3595:95:3391:-245.991,0,-264.453	0/1:136:70,66:70:2493:66:2372:-172.766,0,-183.68	0/1:129:45,84:45:1581:84:3004:-231.643,0,-103.746	0/1:163:87,76:87:3082:76:2705:-194.602,0,-228.535	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:219:219,0:219:7779:0:0:0,-65.9256,-700.143	0/0:94:94,0:94:3308:0:0:0,-28.2968,-297.728	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:238:237,1:237:8397:1:36:0,-68.0469,-752.106	0/0:77:77,0:77:2744:0:0:0,-23.1793,-247.203	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:7:3,4:3:100:4:144:-11.2064,0,-7.22323	0/0:90:90,0:90:3151:0:0:0,-27.0927,-283.815	0/0:71:71,0:71:2505:0:0:0,-21.3731,-225.702	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:289:289,0:289:10192:0:0:0,-86.9977,-917.216	0/1:206:138,68:138:4843:68:2388:-153.149,0,-374	0/0:81:81,0:81:2865:0:0:0,-24.3834,-258.086	0/0:144:144,0:144:5095:0:0:0,-43.3483,-458.663	0/0:277:273,4:273:9673:4:144:0,-70.0717,-857.212	0/0:195:194,1:194:6920:1:36:0,-55.1026,-619.269	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/0:88:88,0:88:3121:0:0:0,-26.4906,-281.117	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.863	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6906	0/1:177:83,93:83:2908:93:3294:-243.409,0,-208.722	0/1:88:46,42:46:1628:42:1485:-107.38,0,-120.289	0/0:121:121,0:121:4243:0:0:0,-36.4246,-382.051	0/0:186:186,0:186:6572:0:0:0,-55.9916,-591.565	0/1:281:134,147:134:4720:147:5276:-390.378,0,-340.37	0/0:116:116,0:116:4128:0:0:0,-34.9195,-371.707	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/1:119:76,43:76:2630:43:1529:-102.077,0,-201.117	0/1:201:103,98:103:3615:98:3496:-254.338,0,-265.041	0/1:315:159,156:159:5625:156:5548:-404.595,0,-411.55	0/1:53:25,28:25:900:28:978:-72.367,0,-65.3664	0/1:62:32,30:32:1148:30:1068:-77.719,0,-84.966	0/0:47:46,1:46:1644:1:36:0,-10.5501,-144.65	0/1:107:49,58:49:1748:58:2060:-153.42,0,-125.394	0/1:14:6,8:6:216:8:284:-21.6889,0,-15.5761	0/0:59:59,0:59:2120:0:0:0,-17.7608,-191.068	0/0:71:71,0:71:2540:0:0:0,-21.3731,-228.85	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:69:30,39:30:1068:39:1369:-102.729,0,-75.661	0/1:46:14,32:14:504:32:1144:-89.4175,0,-31.8507	0/0:189:189,0:189:6691:0:0:0,-56.8947,-602.077	0/0:92:92,0:92:3261:0:0:0,-27.6948,-293.711
chr01	25771362	.	CTTAGGGCAT	CTTGGGGCAA,CTTAGGGCAG,CTTGGGTCAA	88829.1	PASS	AB=0.768344,0.157865,0.275229;ABP=1196.38,1832.12,50.8425;AC=169,17,2;AF=0.898936,0.0904255,0.0106383;AN=188;AO=5029,293,33;CIGAR=3M1X5M1X,9M1X,3M1X2M1X2M1X;DP=5835;DPB=5879;DPRA=0,1.97124,0.746833;EPP=10923.3,639.252,74.6689;EPPR=5.18177;GTI=10;LEN=10,1,10;MEANALT=2.52128,3.15,4.4;MQM=32.891,54.8532,20.5758;MQMR=60;NS=94;NUMALT=3;ODDS=588.137;PAIRED=0,0,0;PAIREDR=0;PAO=0,0,0;PQA=0,0,0;PQR=0;PRO=0;QA=155867,10485,1146;QR=29;RO=1;RPL=4974,193,15;RPP=10450.8,67.1095,3.60252;RPPR=5.18177;RPR=55,100,18;RUN=1,1,1;SAF=4974,193,15;SAP=10450.8,67.1095,3.60252;SAR=55,100,18;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:27:0,25,0,0:0:0:25,0,0:769,0,0:-63.3021,-7.52575,0,-63.3021,-7.52575,-63.3021,-63.3021,-7.52575,-63.3021,-63.3021	1/1:49:0,49,0,0:0:0:49,0,0:1490,0,0:-123.535,-14.7505,0,-123.535,-14.7505,-123.535,-123.535,-14.7505,-123.535,-123.535	1/1:50:0,44,0,0:0:0:44,0,0:1318,0,0:-108.857,-13.2453,0,-108.857,-13.2453,-108.857,-108.857,-13.2453,-108.857,-108.857	1/1:96:0,92,0,0:0:0:92,0,0:2945,0,0:-245.668,-27.6948,0,-245.668,-27.6948,-245.668,-245.668,-27.6948,-245.668,-245.668	1/1:49:0,44,0,0:0:0:44,0,0:1438,0,0:-119.536,-13.2453,0,-119.536,-13.2453,-119.536,-119.536,-13.2453,-119.536,-119.536	1/1:30:0,28,0,0:0:0:28,0,0:933,0,0:-78.6503,-8.42884,0,-78.6503,-8.42884,-78.6503,-78.6503,-8.42884,-78.6503,-78.6503	1/1:22:0,19,0,0:0:0:19,0,0:572,0,0:-46.9349,-5.71957,0,-46.9349,-5.71957,-46.9349,-46.9349,-5.71957,-46.9349,-46.9349	1/1:71:0,71,0,0:0:0:71,0,0:2247,0,0:-187.289,-21.3731,0,-187.289,-21.3731,-187.289,-187.289,-21.3731,-187.289,-187.289	1/1:26:0,26,0,0:0:0:26,0,0:743,0,0:-61.4086,-7.82678,0,-61.4086,-7.82678,-61.4086,-61.4086,-7.82678,-61.4086,-61.4086	1/1:23:0,22,0,0:0:0:22,0,0:715,0,0:-60.3252,-6.62266,0,-60.3252,-6.62266,-60.3252,-60.3252,-6.62266,-60.3252,-60.3252	1/1:38:0,37,0,0:0:0:37,0,0:1194,0,0:-99.0425,-11.1381,0,-99.0425,-11.1381,-99.0425,-99.0425,-11.1381,-99.0425,-99.0425	1/1:42:0,33,0,0:0:0:33,0,0:1048,0,0:-87.4037,-9.93399,0,-87.4037,-9.93399,-87.4037,-87.4037,-9.93399,-87.4037,-87.4037	1/1:44:0,39,0,0:0:0:39,0,0:1181,0,0:-97.9222,-11.7402,0,-97.9222,-11.7402,-97.9222,-97.9222,-11.7402,-97.9222,-97.9222	1/1:16:0,14,0,0:0:0:14,0,0:448,0,0:-37.2742,-4.21442,0,-37.2742,-4.21442,-37.2742,-37.2742,-4.21442,-37.2742,-37.2742	1/1:30:0,29,0,0:0:0:29,0,0:870,0,0:-71.839,-8.72987,0,-71.839,-8.72987,-71.839,-71.839,-8.72987,-71.839,-71.839	1/1:16:0,16,0,0:0:0:16,0,0:480,0,0:-39.5615,-4.81648,0,-39.5615,-4.81648,-39.5615,-39.5615,-4.81648,-39.5615,-39.5615	1/1:16:0,15,0,0:0:0:15,0,0:453,0,0:-37.4934,-4.51545,0,-37.4934,-4.51545,-37.4934,-37.4934,-4.51545,-37.4934,-37.4934	1/1:17:0,17,0,0:0:0:17,0,0:473,0,0:-38.4597,-5.11751,0,-38.4597,-5.11751,-38.4597,-38.4597,-5.11751,-38.4597,-38.4597	1/1:20:0,18,0,0:0:0:18,0,0:548,0,0:-45.3446,-5.41854,0,-45.3446,-5.41854,-45.3446,-45.3446,-5.41854,-45.3446,-45.3446	1/1:30:0,27,0,0:0:0:27,0,0:861,0,0:-71.438,-8.12781,0,-71.438,-8.12781,-71.438,-71.438,-8.12781,-71.438,-71.438	1/1:84:0,66,0,0:0:0:66,0,0:1910,0,0:-155.327,-19.868,0,-155.327,-19.868,-155.327,-155.327,-19.868,-155.327,-155.327	1/1:52:0,45,0,0:0:0:45,0,0:1367,0,0:-112.096,-13.5464,0,-112.096,-13.5464,-112.096,-112.096,-13.5464,-112.096,-112.096	1/1:55:0,49,0,0:0:0:49,0,0:1591,0,0:-132.959,-14.7505,0,-132.959,-14.7505,-132.959,-132.959,-14.7505,-132.959,-132.959	1/2:58:0,52,6,0:0:0:52,6,0:1636,216,0:-136.209,-17.221,-1.56748,-119.045,0,-117.238,-136.209,-17.221,-119.045,-136.209	1/1:20:0,14,0,0:0:0:14,0,0:472,0,0:-39.7974,-4.21442,0,-39.7974,-4.21442,-39.7974,-39.7974,-4.21442,-39.7974,-39.7974	1/2:72:1,53,18,0:1:29:53,18,0:1634,644,0:-167.892,-49.9818,-36.335,-115.931,0,-112.821,-168.193,-52.2896,-118.239,-170.501	1/1:81:0,73,0,0:0:0:73,0,0:2245,0,0:-185.335,-21.9752,0,-185.335,-21.9752,-185.335,-185.335,-21.9752,-185.335,-185.335	1/2:19:0,11,5,0:0:0:11,5,0:331,176,0:-38.0756,-14.383,-11.0716,-23.7398,0,-22.2347,-38.0756,-14.383,-23.7398,-38.0756	1/1:36:0,29,0,0:0:0:29,0,0:829,0,0:-67.6814,-8.72987,0,-67.6814,-8.72987,-67.6814,-67.6814,-8.72987,-67.6814,-67.6814	1/1:26:0,24,0,0:0:0:24,0,0:760,0,0:-62.6649,-7.22472,0,-62.6649,-7.22472,-62.6649,-62.6649,-7.22472,-62.6649,-62.6649	1/2:37:0,29,8,0:0:0:29,8,0:903,288,0:-89.6448,-23.7555,-15.0256,-66.2321,0,-63.8239,-89.6448,-23.7555,-66.2321,-89.6448	1/2:98:0,69,18,0:0:0:69,18,0:2182,644,0:-212.36,-52.2614,-31.4903,-160.135,0,-154.716,-212.36,-52.2614,-160.135,-212.36	1/1:217:0,192,0,0:0:0:192,0,0:6154,0,0:-512.067,-57.7978,0,-512.067,-57.7978,-512.067,-512.067,-57.7978,-512.067,-512.067	1/2:464:0,388,74,0:0:0:388,74,0:11923,2660,0:-1086.48,-216.836,-100.036,-869.652,0,-847.376,-1086.48,-216.836,-869.652,-1086.48	1/1:175:0,172,0,0:0:0:172,0,0:5278,0,0:-438.19,-51.7772,0,-438.19,-51.7772,-438.19,-438.19,-51.7772,-438.19,-438.19	1/2:449:0,350,49,0:0:0:350,49,0:10614,1760,0:-915.353,-143.286,-37.9258,-772.101,0,-757.35,-915.353,-143.286,-772.101,-915.353	1/1:19:0,13,0,0:0:0:13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chr01	26171679	.	CAG	TAA,CAA	134705	PASS	AB=0.539656,0.459332;ABP=43.4826,45.5757;AC=150,38;AF=0.797872,0.202128;AN=188;AO=5083,1369;CIGAR=1X1M1X,2M1X;DP=6464;DPB=6464;DPRA=0,1.22514;EPP=11031.9,2975.76;EPPR=0;GTI=0;LEN=3,1;MEANALT=1.57447,2.07143;MQM=59.3138,59.9116;MQMR=0;NS=94;NUMALT=2;ODDS=4.06386;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=176820,48199;QR=0;RO=0;RPL=5082,1369;RPP=11031.9,2975.76;RPPR=0;RPR=1,0;RUN=1,1;SAF=5083,1369;SAP=11040.6,2975.76;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:84:0,83,0:0:0:83,0:2937,0:-264.136,-24.9855,0,-264.136,-24.9855,-264.136	1/2:61:0,31,30:0:0:31,30:1047,1050:-170.615,-85.7784,-76.4465,-85.18,0,-76.1491	1/1:212:0,211,0:0:0:211,0:7299,0:-656.637,-63.5173,0,-656.637,-63.5173,-656.637	1/1:157:0,157,0:0:0:157,0:5350,0:-481.578,-47.2617,0,-481.578,-47.2617,-481.578	1/2:72:0,35,37:0:0:35,37:1194,1313:-204.2,-107.333,-96.7971,-97.214,0,-86.0759	1/2:25:0,12,13:0:0:12,13:408,453:-70.2756,-37.1862,-33.5739,-33.4333,0,-29.5199	1/2:72:0,45,27:0:0:45,27:1576,918:-202.934,-74.7987,-61.2524,-128.479,0,-120.351	1/1:68:0,68,0:0:0:68,0:2369,0:-213.406,-20.47,0,-213.406,-20.47,-213.406	1/1:104:0,104,0:0:0:104,0:3621,0:-326.047,-31.3071,0,-326.047,-31.3071,-326.047	1/1:43:0,42,0:0:0:42,0:1471,0:-132.353,-12.6433,0,-132.353,-12.6433,-132.353	1/1:20:0,20,0:0:0:20,0:700,0:-63.2895,-6.0206,0,-63.2895,-6.0206,-63.2895	1/1:91:0,91,0:0:0:91,0:3199,0:-288.078,-27.3937,0,-288.078,-27.3937,-288.078	1/2:44:0,23,21:0:0:23,21:807,736:-125.896,-60.2408,-53.3171,-66.0052,0,-59.6836	1/2:21:0,14,7:0:0:14,7:491,252:-60.8491,-20.9217,-16.7073,-40.2841,0,-38.1769	1/2:44:0,17,27:0:0:17,27:599,960:-127.326,-78.5885,-73.471,-49.0913,0,-40.9634	1/1:49:0,49,0:0:0:49,0:1740,0:-156.868,-14.7505,0,-156.868,-14.7505,-156.868	1/1:30:0,30,0:0:0:30,0:1065,0:-96.1503,-9.0309,0,-96.1503,-9.0309,-96.1503	1/2:8:0,3,5:0:0:3,5:93,156:-20.3048,-12.8418,-11.9387,-7.77364,0,-6.26849	1/2:20:0,10,9:0:0:10,9:358,324:-55.7349,-26.5356,-23.5253,-29.2928,0,-26.5835	1/2:141:0,84,57:0:0:84,57:2892,2005:-397.976,-163.559,-138.272,-234.765,0,-217.607	1/2:120:0,57,63:0:0:57,63:1989,2248:-345.338,-183.619,-166.46,-162.072,0,-143.107	1/2:168:0,55,113:0:0:55,113:1914,3963:-478.249,-322.764,-306.207,-155.834,0,-121.817	1/1:71:0,71,0:0:0:71,0:2426,0:-218.423,-21.3731,0,-218.423,-21.3731,-218.423	1/1:80:0,75,5:0:0:75,5:2612,180:-234.78,-22.5773,0,-220.092,-7.53034,-218.587	1/1:62:0,61,0:0:0:61,0:2136,0:-192.041,-18.3628,0,-192.041,-18.3628,-192.041	1/2:174:0,104,68:0:0:104,68:3601,2400:-486.856,-195.555,-164.248,-291.417,0,-270.947	1/1:202:0,202,0:0:0:202,0:7057,0:-635.078,-60.8081,0,-635.078,-60.8081,-635.078	1/1:31:0,31,0:0:0:31,0:1101,0:-99.4008,-9.33193,0,-99.4008,-9.33193,-99.4008	1/2:167:0,96,71:0:0:96,71:3315,2481:-471.265,-202.17,-173.271,-269.443,0,-248.07	1/1:99:0,99,0:0:0:99,0:3383,0:-304.335,-29.802,0,-304.335,-29.802,-304.335	1/1:46:0,46,0:0:0:46,0:1609,0:-145.069,-13.8474,0,-145.069,-13.8474,-145.069	1/1:6:0,6,0:0:0:6,0:197,0:-18.053,-1.80618,0,-18.053,-1.80618,-18.053	1/1:22:0,22,0:0:0:22,0:788,0:-71.2225,-6.62266,0,-71.2225,-6.62266,-71.2225	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:8:0,8,0:0:0:8,0:275,0:-25.0658,-2.40824,0,-25.0658,-2.40824,-25.0658	1/1:8:0,7,0:0:0:7,0:235,0:-21.1905,-2.10721,0,-21.1905,-2.10721,-21.1905	1/2:166:0,101,65:0:0:101,65:3548,2308:-476.737,-188.415,-158.01,-288.676,0,-269.109	1/1:157:0,157,0:0:0:157,0:5453,0:-490.561,-47.2617,0,-490.561,-47.2617,-490.561	1/2:19:0,8,11:0:0:8,11:283,387:-54.869,-31.8546,-29.4464,-23.3668,0,-20.0555	1/2:7:0,5,2:0:0:5,2:175,72:-20.4657,-6.23466,-4.72951,-14.588,0,-13.9859	1/2:54:0,24,30:0:0:24,30:837,1072:-155.821,-87.7525,-80.5277,-68.4208,0,-59.3899	1/1:16:0,16,0:0:0:16,0:543,0:-49.165,-4.81648,0,-49.165,-4.81648,-49.165	1/1:152:0,152,0:0:0:152,0:5224,0:-469.806,-45.7566,0,-469.806,-45.7566,-469.806	1/1:37:0,37,0:0:0:37,0:1310,0:-118.116,-11.1381,0,-118.116,-11.1381,-118.116	1/1:39:0,39,0:0:0:39,0:1355,0:-122.246,-11.7402,0,-122.246,-11.7402,-122.246	1/1:108:0,108,0:0:0:108,0:3743,0:-336.803,-32.5112,0,-336.803,-32.5112,-336.803	1/1:105:0,104,0:0:0:104,0:3621,0:-325.877,-31.3071,0,-325.877,-31.3071,-325.877	1/2:104:0,61,43:0:0:61,43:2138,1514:-297.423,-123.607,-105.244,-174.167,0,-161.223	1/2:67:0,41,26:0:0:41,26:1431,921:-191.734,-75.3784,-63.0362,-116.708,0,-108.881	1/2:56:0,32,24:0:0:32,24:1115,856:-160.775,-70.134,-60.5011,-90.9942,0,-83.7695	1/2:107:0,60,47:0:0:60,47:2124,1641:-306.592,-133.828,-115.766,-173.116,0,-158.967	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:124:0,124,0:0:0:124,0:4348,0:-391.305,-37.3277,0,-391.305,-37.3277,-391.305	1/1:22:0,22,0:0:0:22,0:768,0:-69.4346,-6.62266,0,-69.4346,-6.62266,-69.4346	1/1:10:0,10,0:0:0:10,0:351,0:-31.9098,-3.0103,0,-31.9098,-3.0103,-31.9098	1/1:89:0,89,0:0:0:89,0:3151,0:-283.817,-26.7917,0,-283.817,-26.7917,-283.817	1/1:57:0,56,0:0:0:56,0:1947,0:-175.213,-16.8577,0,-175.213,-16.8577,-175.213	1/1:13:0,13,0:0:0:13,0:426,0:-38.6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chr01	26749771	.	C	A	92472.4	PASS	AB=0.425704;ABP=139.174;AC=144;AF=0.765957;AN=188;AO=4507;CIGAR=1X;DP=7270;DPB=7270;DPRA=0;EPP=9789.84;EPPR=5974.56;GTI=11;LEN=1;MEANALT=1.08511;MQM=59.9687;MQMR=59.996;NS=94;NUMALT=1;ODDS=0.224527;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159668;QR=98027;RO=2750;RPL=0;RPP=9789.84;RPPR=5974.56;RPR=4507;RUN=1;SAF=0;SAP=9789.84;SAR=4507;SRF=0;SRP=5974.56;SRR=2750;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:25:0,25:0:0:25:887:-80.1481,-7.52575,0	0/1:43:14,29:14:504:29:1032:-80.2492,0,-32.7538	1/1:47:0,47:0:0:47:1669:-150.495,-14.1484,0	1/1:167:0,167:0:0:167:5939:-534.62,-50.272,0	0/1:61:39,22:39:1383:22:788:-52.882,0,-106.405	0/1:4:1,3:1:36:3:104:-8.49868,0,-2.39415	0/1:53:27,26:27:949:26:927:-67.7928,0,-69.7682	1/1:98:0,98:0:0:98:3455:-311.15,-29.5009,0	1/1:28:0,28:0:0:28:985:-88.9615,-8.42884,0	1/1:78:1,77:1:36:77:2731:-242.433,-19.8821,0	1/1:30:0,30:0:0:30:1072:-96.7925,-9.0309,0	1/1:63:0,63:0:0:63:2233:-201.224,-18.9649,0	0/1:31:9,22:9:324:22:783:-61.461,0,-20.1739	0/1:21:9,12:9:316:12:428:-32.5372,0,-22.4572	0/1:28:4,24:4:144:24:864:-69.6537,0,-4.88478	1/1:28:0,28:0:0:28:1000:-90.3154,-8.42884,0	1/1:20:0,20:0:0:20:707:-63.9546,-6.0206,0	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/1:53:38,15:38:1355:15:527:-31.8056,0,-106.295	0/1:105:50,55:50:1787:55:1959:-144.977,0,-129.504	0/1:68:42,26:42:1496:26:909:-61.6534,0,-114.465	0/1:56:43,13:43:1536:13:456:-24.5156,0,-121.675	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:39:0,39:0:0:39:1372:-123.776,-11.7402,0	1/1:94:0,94:0:0:94:3334:-300.272,-28.2968,0	0/1:202:112,90:112:4001:90:3183:-225.887,0,-299.47	1/1:469:0,469:0:0:469:16547:-1488.92,-141.183,0	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	0/1:270:159,106:159:5703:106:3761:-258.558,0,-433.236	1/1:131:0,131:0:0:131:4631:-416.948,-39.4349,0	1/1:65:0,65:0:0:65:2304:-207.619,-19.567,0	0/1:5:1,4:1:36:4:140:-11.4394,0,-2.09312	1/1:21:0,21:0:0:21:742:-67.103,-6.32163,0	0/0:467:459,7:459:16362:7:252:0,-117.611,-1449.23	1/1:7:0,7:0:0:7:239:-21.8427,-2.10721,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:65:18,47:18:639:47:1654:-129.58,0,-38.2713	1/1:122:0,122:0:0:122:4317:-388.707,-36.7257,0	0/1:50:37,13:37:1324:13:451:-25.8675,0,-104.411	0/0:337:334,3:334:11855:3:104:0,-91.7443,-1057.11	0/1:85:52,33:52:1863:33:1175:-80.4694,0,-142.361	1/1:15:0,15:0:0:15:528:-47.8514,-4.51545,0	1/1:96:0,96:0:0:96:3359:-302.525,-28.8989,0	1/1:20:0,20:0:0:20:707:-63.9546,-6.0206,0	1/1:39:0,39:0:0:39:1370:-123.597,-11.7402,0	1/1:61:0,61:0:0:61:2138:-192.683,-18.3628,0	1/1:55:0,55:0:0:55:1938:-174.693,-16.5567,0	0/1:155:75,80:75:2681:80:2841:-209.268,0,-194.874	0/1:82:59,23:59:2093:23:824:-49.7989,0,-163.954	0/1:111:52,59:52:1868:59:2101:-155.943,0,-134.985	0/1:94:44,50:44:1563:50:1784:-132.546,0,-112.664	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:60:0,60:0:0:60:2152:-193.947,-18.0618,0	1/1:40:0,40:0:0:40:1407:-126.925,-12.0412,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:93:0,92:0:0:92:3233:-290.872,-27.6948,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/0:336:331,5:331:11786:5:165:0,-85.9725,-1045.44	1/1:51:0,51:0:0:51:1819:-163.991,-15.3525,0	1/1:58:1,56:1:36:56:1962:-173.254,-13.9203,0	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	1/1:166:0,166:0:0:166:5898:-530.93,-49.971,0	0/1:154:102,52:102:3644:52:1848:-120.241,0,-281.807	1/1:95:0,95:0:0:95:3348:-301.537,-28.5979,0	1/1:69:0,69:0:0:69:2463:-221.924,-20.7711,0	1/1:86:1,85:1:36:85:3028:-269.153,-22.2903,0	0/1:98:73,25:73:2620:25:862:-48.1611,0,-206.546	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:41:0,41:0:0:41:1449:-130.704,-12.3422,0	1/1:23:0,23:0:0:23:815:-73.6708,-6.92369,0	1/1:23:0,23:0:0:23:813:-73.4891,-6.92369,0	0/1:102:70,32:70:2512:32:1132:-71.4835,0,-195.627	0/1:54:17,37:17:608:37:1328:-103.567,0,-38.7964	1/1:94:0,94:0:0:94:3335:-300.367,-28.2968,0	1/1:108:0,108:0:0:108:3859:-347.505,-32.5112,0	0/1:110:63,47:63:2264:47:1688:-119.094,0,-170.909	1/1:88:0,88:0:0:88:3143:-283.095,-26.4906,0	1/1:28:0,28:0:0:28:976:-87.7786,-8.42884,0	0/1:63:33,30:33:1171:30:1068:-77.4672,0,-86.7318	0/1:105:65,40:65:2316:40:1432:-97.5694,0,-177.093	0/1:126:71,53:71:2535:53:1892:-132.871,0,-190.713	0/1:28:8,20:8:288:20:708:-55.6168,0,-17.8386	0/1:25:12,12:12:428:12:432:-31.6366,0,-31.2745	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	0/1:49:10,39:10:356:39:1404:-111.909,0,-17.6308	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	1/1:38:0,38:0:0:38:1333:-120.268,-11.4391,0	1/1:35:0,33:0:0:33:1158:-104.165,-9.93399,0	0/1:66:53,13:53:1877:13:460:-21.8674,0,-149.339	0/1:179:143,36:143:5052:36:1249:-58.8226,0,-400.946	0/1:18:9,9:9:320:9:320:-23.7238,0,-23.7238	1/1:83:0,83:0:0:83:2935:-264.386,-24.9855,0	1/1:47:0,47:0:0:47:1635:-147.435,-14.1484,0
chr01	26760254	.	TCCCTG	TCCTG	10994.1	PASS	AB=0.438158;ABP=138.641;AC=38;AF=0.202128;AN=188;AO=1800;CIGAR=1M1D4M;DP=9549;DPB=9248.5;DPRA=1.14768;EPP=3911.66;EPPR=16736.4;GTI=2;LEN=1;MEANALT=1.27907;MQM=27.8756;MQMR=41.8938;NS=94;NUMALT=1;ODDS=1.29489;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=50011;QR=271972;RO=7722;RPL=1800;RPP=3911.66;RPPR=16736.4;RPR=0;RUN=1;SAF=0;SAP=3911.66;SAR=1800;SRF=0;SRP=16771.1;SRR=7722;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/0:100:100,0:100:3552:0:0:0,-30.103,-307.738	0/1:85:61,23:61:2140:23:636:-25.7085,0,-161.04	0/0:124:121,1:121:4228:1:25:0,-34.7626,-366.628	0/0:173:171,0:171:6024:0:0:0,-51.4761,-518.413	0/1:55:41,14:41:1454:14:380:-14.0979,0,-111.698	0/1:37:21,16:21:743:16:448:-25.1019,0,-54.0321	0/1:95:68,27:68:2422:27:739:-30.8525,0,-178.45	0/0:145:143,1:143:5004:1:28:0,-41.1089,-434.188	0/0:200:198,0:198:6970:0:0:0,-59.6039,-605.771	0/0:124:123,0:123:4300:0:0:0,-37.0267,-372.514	0/0:101:101,0:101:3595:0:0:0,-30.404,-309.798	0/0:124:123,0:123:4326:0:0:0,-37.0267,-373.523	0/1:92:45,47:45:1589:47:1303:-77.105,0,-111.204	0/1:101:44,57:44:1559:57:1596:-98.0607,0,-107.25	0/1:98:44,54:44:1571:54:1510:-92.0355,0,-105.882	0/0:100:100,0:100:3515:0:0:0,-30.103,-309.43	0/0:70:70,0:70:2489:0:0:0,-21.0721,-214.496	0/1:48:30,18:30:1054:18:504:-26.2894,0,-77.8844	0/1:35:22,12:22:784:12:336:-16.8794,0,-57.369	0/1:308:180,128:180:6325:128:3536:-191.734,0,-447.468	0/1:196:103,92:103:3605:92:2538:-145.199,0,-258.911	0/1:66:40,26:40:1407:26:733:-39.3178,0,-105.247	0/0:132:131,1:131:4593:1:28:0,-37.2366,-390.627	0/0:101:94,7:94:3317:7:196:0,-14.4084,-275.875	0/0:138:138,0:138:4868:0:0:0,-41.5421,-427.083	0/1:221:135,86:135:4755:86:2399:-126.759,0,-357.04	0/0:219:219,0:219:7718:0:0:0,-65.9256,-681.085	0/0:37:37,0:37:1306:0:0:0,-11.1381,-115.818	0/1:209:118,91:118:4201:91:2512:-140.029,0,-309.27	0/0:112:112,0:112:3939:0:0:0,-33.7154,-347.99	0/0:136:136,0:136:4787:0:0:0,-40.9401,-410.37	0/0:5:5,0:5:179:0:0:0,-1.50515,-16.1856	0/0:10:10,0:10:358:0:0:0,-3.0103,-32.0172	0/1:7:3,4:3:108:4:112:-7.14025,0,-7.70035	0/0:9:9,0:9:299:0:0:0,-2.70927,-25.9566	0/0:10:10,0:10:346:0:0:0,-3.0103,-29.7433	0/1:210:96,112:96:3374:112:3095:-185.83,0,-237.025	0/0:128:128,0:128:4522:0:0:0,-38.5318,-398.708	0/1:65:50,15:50:1749:15:419:-14.3758,0,-132.829	0/0:4:4,0:4:137:0:0:0,-1.20412,-12.4731	0/1:117:67,50:67:2362:50:1396:-77.1381,0,-173.207	0/0:52:52,0:52:1845:0:0:0,-15.6536,-161.588	0/0:196:196,0:196:6858:0:0:0,-59.0019,-606.182	0/0:79:79,0:79:2775:0:0:0,-23.7814,-238.243	0/0:72:71,0:71:2516:0:0:0,-21.3731,-216.727	0/0:136:136,0:136:4795:0:0:0,-40.9401,-427.94	0/0:121:120,0:120:4259:0:0:0,-36.1236,-371.823	0/1:127:74,52:74:2574:52:1439:-77.5875,0,-184.676	0/1:90:63,27:63:2200:27:754:-33.71,0,-159.871	0/1:77:41,35:41:1459:35:980:-55.8501,0,-103.17	0/1:79:58,21:58:2050:21:588:-23.7056,0,-158.634	0/0:13:13,0:13:455:0:0:0,-3.91339,-39.7466	0/0:119:119,0:119:4194:0:0:0,-35.8226,-363.258	0/0:63:63,0:63:2212:0:0:0,-18.9649,-197.278	0/0:14:14,0:14:504:0:0:0,-4.21442,-44.4843	0/0:176:174,0:174:6103:0:0:0,-52.3792,-538.695	0/0:77:77,0:77:2731:0:0:0,-23.1793,-230.867	0/0:10:10,0:10:358:0:0:0,-3.0103,-32.3735	0/1:18:10,8:10:356:8:224:-12.8265,0,-26.7977	0/0:123:123,0:123:4359:0:0:0,-37.0267,-385.574	0/0:111:110,1:110:3883:1:28:0,-30.915,-330.646	0/0:11:11,0:11:388:0:0:0,-3.31133,-33.7527	0/0:134:133,0:133:4720:0:0:0,-40.037,-420.515	0/1:151:89,62:89:3139:62:1721:-93.1058,0,-224.898	0/0:100:100,0:100:3487:0:0:0,-30.103,-306.408	0/0:94:94,0:94:3343:0:0:0,-28.2968,-288.265	0/0:161:161,0:161:5665:0:0:0,-48.4658,-488.453	0/1:124:50,74:50:1732:74:2076:-129.78,0,-112.354	0/0:80:80,0:80:2808:0:0:0,-24.0824,-246.822	0/0:92:92,0:92:3222:0:0:0,-27.6948,-281.674	0/0:60:60,0:60:2118:0:0:0,-18.0618,-188.905	0/0:31:31,0:31:1082:0:0:0,-9.33193,-93.316	0/1:101:52,49:52:1820:49:1353:-78.7173,0,-128.643	0/1:93:45,48:45:1590:48:1335:-79.6133,0,-111.113	0/0:197:196,0:196:6862:0:0:0,-59.0019,-602.776	0/0:154:153,0:153:5398:0:0:0,-46.0576,-464.691	0/1:144:101,43:101:3535:43:1195:-53.0137,0,-263.192	0/0:134:134,0:134:4736:0:0:0,-40.338,-414.236	0/0:24:24,0:24:843:0:0:0,-7.22472,-73.0092	0/1:86:52,34:52:1827:34:939:-49.6687,0,-136.016	0/1:78:45,33:45:1586:33:921:-50.7711,0,-115.547	0/1:214:129,84:129:4550:84:2330:-123.447,0,-326.756	0/1:58:37,21:37:1306:21:583:-29.5755,0,-96.1336	0/1:91:49,42:49:1721:42:1176:-67.3303,0,-119.349	0/0:69:69,0:69:2441:0:0:0,-20.7711,-209.306	0/1:153:71,82:71:2492:82:2284:-137.562,0,-167.85	0/1:23:15,7:15:533:7:188:-8.50852,0,-39.7931	0/0:80:80,0:80:2820:0:0:0,-24.0824,-245.699	0/0:91:89,0:89:3123:0:0:0,-26.7917,-270.397	0/1:60:37,23:37:1322:23:637:-33.4557,0,-99.0174	0/1:153:69,84:69:2449:84:2335:-141.611,0,-169.52	0/1:118:30,88:30:1057:88:2456:-161.954,0,-55.4912	0/0:136:136,0:136:4803:0:0:0,-40.9401,-412.165	0/0:154:154,0:154:5394:0:0:0,-46.3586,-464.858
chr01	26760270	.	T	C	15194.1	PASS	AB=0.449661;ABP=93.9557;AC=38;AF=0.202128;AN=188;AO=1870;CIGAR=1X;DP=9574;DPB=9574;DPRA=1.18952;EPP=4063.66;EPPR=16732;GTI=0;LEN=1;MEANALT=1;MQM=27.5829;MQMR=41.8463;NS=94;NUMALT=1;ODDS=0.297436;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66776;QR=276142;RO=7704;RPL=1870;RPP=4063.66;RPPR=16732;RPR=0;RUN=1;SAF=0;SAP=4063.66;SAR=1870;SRF=0;SRP=16732;SRR=7704;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:99:99,0:99:3556:0:0:0,-29.802,-307.474	0/1:86:62,24:62:2208:24:849:-30.7751,0,-165.69	0/0:124:124,0:124:4429:0:0:0,-37.3277,-382.386	0/0:174:172,2:172:6168:2:72:0,-47.3491,-522.613	0/1:60:41,19:41:1472:19:669:-22.3887,0,-111.491	0/1:38:21,17:21:752:17:612:-30.6984,0,-54.0292	0/1:94:67,27:67:2400:27:953:-36.3179,0,-176.449	0/0:144:143,1:143:5109:1:36:0,-40.6121,-439.741	0/0:200:200,0:200:7173:0:0:0,-60.206,-618.835	0/0:124:124,0:124:4464:0:0:0,-37.3277,-384.26	0/0:101:101,0:101:3602:0:0:0,-30.404,-309.648	0/0:124:124,0:124:4464:0:0:0,-37.3277,-382.879	0/1:92:45,47:45:1620:47:1688:-87.5069,0,-112.652	0/1:107:44,63:44:1580:63:2222:-120.077,0,-107.168	0/1:101:44,57:44:1584:57:2032:-107.167,0,-105.815	0/0:100:100,0:100:3577:0:0:0,-30.103,-314.057	0/0:69:69,0:69:2484:0:0:0,-20.7711,-213.21	0/1:47:29,18:29:1044:18:633:-29.8045,0,-77.0367	0/1:35:22,13:22:788:13:460:-21.6031,0,-57.5619	0/1:309:176,133:176:6278:133:4745:-228.637,0,-440.908	0/1:202:103,99:103:3673:99:3536:-178.926,0,-261.895	0/1:69:41,28:41:1472:28:1008:-45.9762,0,-108.797	0/0:132:131,1:131:4696:1:36:0,-36.9998,-396.808	0/0:101:94,7:94:3376:7:252:0,-12.8923,-278.793	0/0:137:137,0:137:4897:0:0:0,-41.2411,-429.091	0/1:221:135,86:135:4828:86:3065:-144.939,0,-362.335	0/0:215:215,0:215:7712:0:0:0,-64.7214,-679.234	0/0:37:37,0:37:1332:0:0:0,-11.1381,-117.945	0/1:209:115,94:115:4140:94:3342:-168.248,0,-303.827	0/0:112:112,0:112:3986:0:0:0,-33.7154,-351.214	0/0:135:135,0:135:4836:0:0:0,-40.639,-413.281	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.2662	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.1787	0/1:8:3,5:3:108:5:180:-10.4033,0,-7.39932	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.2557	0/0:10:10,0:10:360:0:0:0,-3.0103,-30.4458	0/1:216:98,118:98:3516:118:4221:-218.059,0,-245.672	0/0:126:126,0:126:4528:0:0:0,-37.9298,-397.91	0/1:65:50,15:50:1800:15:531:-17.3827,0,-136.775	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.0527	0/1:117:67,50:67:2408:50:1788:-87.6413,0,-176.879	0/0:52:52,0:52:1860:0:0:0,-15.6536,-162.597	0/0:195:195,0:195:6993:0:0:0,-58.7008,-616.079	0/0:78:78,0:78:2800:0:0:0,-23.4803,-239.131	0/0:73:73,0:73:2609:0:0:0,-21.9752,-222.073	0/0:135:135,0:135:4852:0:0:0,-40.639,-432.637	0/0:121:121,0:121:4344:0:0:0,-36.4246,-378.434	0/1:128:73,55:73:2613:55:1972:-94.224,0,-186.164	0/1:88:62,26:62:2209:26:936:-37.8101,0,-160.32	0/1:79:42,37:42:1512:37:1332:-66.2196,0,-106.134	0/1:79:58,21:58:2080:21:756:-28.2065,0,-161.002	0/0:13:13,0:13:468:0:0:0,-3.91339,-40.763	0/0:118:118,0:118:4228:0:0:0,-35.5215,-364.531	0/0:63:63,0:63:2252:0:0:0,-18.9649,-200.512	0/0:14:14,0:14:504:0:0:0,-4.21442,-44.4843	0/0:177:177,0:177:6310:0:0:0,-53.2823,-554.098	0/0:77:77,0:77:2753:0:0:0,-23.1793,-233.32	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.5484	0/1:20:10,10:10:360:10:342:-16.6661,0,-26.5462	0/0:123:123,0:123:4420:0:0:0,-37.0267,-390.293	0/0:111:110,1:110:3956:1:36:0,-30.6781,-335.755	0/0:11:11,0:11:392:0:0:0,-3.31133,-33.9989	0/0:133:133,0:133:4780:0:0:0,-40.037,-425.427	0/1:155:89,66:89:3177:66:2368:-111.838,0,-225.979	0/0:99:99,0:99:3552:0:0:0,-29.802,-310.981	0/0:94:94,0:94:3372:0:0:0,-28.2968,-290.227	0/0:159:159,0:159:5704:0:0:0,-47.8638,-489.152	0/1:126:50,76:50:1785:76:2717:-148.462,0,-114.986	0/0:79:79,0:79:2840:0:0:0,-23.7814,-248.487	0/0:91:91,0:91:3268:0:0:0,-27.3937,-284.533	0/0:60:60,0:60:2148:0:0:0,-18.0618,-191.321	0/0:30:30,0:30:1080:0:0:0,-9.0309,-92.5655	0/1:101:52,49:52:1872:49:1741:-89.1717,0,-132.038	0/1:98:45,53:45:1616:53:1900:-100.132,0,-111.645	0/0:196:196,0:196:6994:0:0:0,-59.0019,-610.178	0/0:154:154,0:154:5516:0:0:0,-46.3586,-471.924	0/1:144:100,44:100:3592:44:1580:-65.0452,0,-266.785	0/0:134:134,0:134:4808:0:0:0,-40.338,-419.723	0/0:23:23,0:23:828:0:0:0,-6.92369,-71.503	0/1:84:52,32:52:1872:32:1122:-51.2524,0,-140.284	0/1:78:45,33:45:1616:33:1180:-56.3622,0,-117.388	0/1:213:128,85:128:4577:85:3052:-142.476,0,-327.595	0/1:59:37,22:37:1324:22:792:-34.8849,0,-97.1739	0/1:94:50,44:50:1800:44:1560:-79.4242,0,-124.601	0/0:69:69,0:69:2480:0:0:0,-20.7711,-211.117	0/1:154:70,84:70:2508:84:2991:-156.922,0,-168.817	0/1:22:15,7:15:540:7:252:-8.80018,0,-40.4701	0/0:80:80,0:80:2876:0:0:0,-24.0824,-249.394	0/0:92:92,0:92:3281:0:0:0,-27.6948,-281.862	0/1:59:37,22:37:1332:22:792:-35.2986,0,-100.166	0/1:156:68,88:68:2444:88:3160:-163.221,0,-168.064	0/1:119:28,91:28:1004:91:3265:-185.588,0,-50.9735	0/0:136:136,0:136:4877:0:0:0,-40.9401,-415.573	0/0:151:151,0:151:5416:0:0:0,-45.4555,-463.933
chr01	27408652	.	A	T	83466.9	PASS	AB=0.501957;ABP=3.25672;AC=40;AF=0.212766;AN=188;AO=3736;CIGAR=1X;DP=15399;DPB=15399;DPRA=1.49174;EPP=8115.63;EPPR=25294.2;GTI=2;LEN=1;MEANALT=1.13462;MQM=59.9615;MQMR=59.9719;NS=94;NUMALT=1;ODDS=1.95123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=132449;QR=411227;RO=11651;RPL=2333;RPP=505.715;RPPR=1233.05;RPR=1403;RUN=1;SAF=2333;SAP=505.715;SAR=1403;SRF=7109;SRP=1231.14;SRR=4542;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:82:82,0:82:2894:0:0:0,-24.6845,-260.698	0/1:410:188,222:188:6617:222:7838:-582.026,0,-472.194	0/0:336:335,0:335:11901:0:0:0,-100.845,-1070.71	0/0:348:348,0:348:12346:0:0:0,-104.758,-1110.95	0/0:116:114,2:114:4048:2:72:0,-28.0828,-357.672	0/0:79:79,0:79:2771:0:0:0,-23.7814,-249.632	0/1:210:123,86:123:4362:86:3058:-212.173,0,-329.48	0/0:282:279,3:279:9863:3:108:0,-74.8153,-877.496	0/1:193:94,97:94:3336:97:3444:-252.318,0,-242.604	0/0:246:244,1:244:8602:1:21:0,-71.9373,-772.017	0/0:114:114,0:114:3987:0:0:0,-34.3174,-359.026	0/0:108:108,0:108:3797:0:0:0,-32.5112,-341.93	0/1:132:54,78:54:1904:78:2762:-209.086,0,-131.899	0/0:144:143,0:143:5081:0:0:0,-43.0473,-457.077	0/1:105:52,52:52:1817:52:1854:-135.471,0,-132.137	0/0:96:96,0:96:3341:0:0:0,-28.8989,-300.91	0/0:106:106,0:106:3710:0:0:0,-31.9092,-334.106	0/1:108:41,67:41:1412:67:2399:-183.655,0,-94.8613	0/0:82:82,0:82:2847:0:0:0,-24.6845,-256.471	0/0:402:402,0:402:14238:0:0:0,-121.014,-1281.19	0/1:238:124,113:124:4387:113:3995:-287.964,0,-323.301	0/1:176:65,111:65:2315:111:3944:-302.172,0,-155.629	0/0:123:122,1:122:4332:1:36:0,-33.4284,-386.458	0/1:207:90,117:90:3190:117:4179:-313.979,0,-225.012	0/0:168:168,0:168:5926:0:0:0,-50.573,-533.453	0/1:380:199,181:199:7009:181:6414:-462.931,0,-516.49	0/1:395:192,203:192:6817:203:7182:-527.491,0,-494.7	0/0:44:44,0:44:1558:0:0:0,-13.2453,-140.51	0/0:428:427,1:427:15112:1:36:0,-125.243,-1356.23	0/0:222:222,0:222:7813:0:0:0,-66.8287,-703.141	0/1:178:87,91:87:3053:91:3244:-238.599,0,-221.419	0/0:12:12,0:12:420:0:0:0,-3.61236,-38.134	0/0:30:30,0:30:1064:0:0:0,-9.0309,-96.0717	0/1:10:6,4:6:212:4:140:-9.93428,0,-16.4145	0/0:27:27,0:27:947:0:0:0,-8.12781,-85.5438	0/0:23:23,0:23:801:0:0:0,-6.92369,-72.4067	0/1:240:125,114:125:4412:114:4028:-290.405,0,-324.95	0/1:246:135,111:135:4774:111:3941:-280.699,0,-355.766	0/1:139:68,71:68:2355:71:2501:-183.495,0,-170.321	0/1:9:5,4:5:180:4:140:-10.2353,0,-13.8428	0/1:320:151,167:151:5348:167:5972:-441.545,0,-385.414	0/0:72:72,0:72:2505:0:0:0,-21.6742,-225.704	0/0:271:270,1:270:9554:1:21:0,-79.4792,-857.718	0/0:105:104,1:104:3630:1:36:0,-28.0099,-323.311	0/0:79:79,0:79:2772:0:0:0,-23.7814,-249.722	0/0:173:172,1:172:6091:1:32:0,-48.8789,-545.097	0/0:195:195,0:195:6807:0:0:0,-58.7008,-612.714	0/1:290:150,140:150:5305:140:4998:-362.669,0,-390.286	0/1:177:96,81:96:3408:81:2895:-207.503,0,-253.652	0/1:194:109,85:109:3850:85:2991:-211.023,0,-288.3	0/0:389:389,0:389:13821:0:0:0,-117.101,-1243.68	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:186:185,1:185:6514:1:36:0,-52.3933,-582.753	0/0:85:85,0:85:3011:0:0:0,-25.5875,-271.223	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.459	0/0:208:208,0:208:7379:0:0:0,-62.6142,-664.166	0/0:75:75,0:75:2633:0:0:0,-22.5772,-237.218	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:47:31,16:31:1104:16:563:-36.8508,0,-85.5222	0/0:152:152,0:152:5345:0:0:0,-45.7566,-481.19	0/0:140:140,0:140:4939:0:0:0,-42.1442,-444.665	0/0:14:14,0:14:488:0:0:0,-4.21442,-44.2504	0/0:235:235,0:235:8289:0:0:0,-70.742,-745.76	0/1:292:153,139:153:5416:139:4923:-355.321,0,-399.183	0/1:127:70,57:70:2496:57:1988:-140.959,0,-186.663	0/0:131:131,0:131:4635:0:0:0,-39.4349,-417.313	0/0:264:263,1:263:9229:1:36:0,-75.8736,-826.957	0/0:191:189,2:189:6671:2:68:0,-51.039,-594.022	0/0:70:70,0:70:2454:0:0:0,-21.0721,-221.115	0/0:185:184,0:184:6518:0:0:0,-55.3895,-586.43	0/1:107:55,52:55:1909:52:1836:-133.308,0,-139.876	0/1:46:16,30:16:568:30:1065:-82.3124,0,-37.6045	0/1:211:111,100:111:3943:100:3591:-259.878,0,-291.547	0/1:126:67,59:67:2388:59:2055:-147.287,0,-177.248	0/0:288:288,0:288:10161:0:0:0,-86.6966,-914.436	0/1:267:134,133:134:4751:133:4751:-347.373,0,-347.37	0/1:184:87,97:87:3103:97:3436:-254.064,0,-224.108	0/1:247:132,115:132:4638:115:4061:-291.325,0,-343.231	0/0:20:20,0:20:703:0:0:0,-6.0206,-63.5935	0/0:194:193,1:193:6778:1:36:0,-54.8015,-606.506	0/1:148:62,86:62:2195:86:3000:-225.678,0,-153.263	0/1:386:204,182:204:7199:182:6414:-461.154,0,-531.776	0/1:121:62,59:62:2204:59:2079:-150.955,0,-161.924	0/1:107:50,57:50:1765:57:2027:-150.492,0,-126.921	0/1:112:45,67:45:1566:67:2377:-180.457,0,-107.511	0/1:199:98,101:98:3416:101:3607:-264.931,0,-247.754	0/1:46:16,30:16:555:30:1068:-82.5847,0,-36.4287	0/0:103:103,0:103:3654:0:0:0,-31.0061,-329.066	0/0:114:114,0:114:4019:0:0:0,-34.3174,-361.902	0/0:96:96,0:96:3352:0:0:0,-28.8989,-301.899	0/1:182:92,90:92:3217:90:3212:-234.516,0,-234.969	0/1:99:44,55:44:1528:55:1939:-144.984,0,-108.007	0/0:128:128,0:128:4535:0:0:0,-38.5318,-408.319	0/0:137:137,0:137:4809:0:0:0,-41.2411,-432.927
chr01	27826138	.	G	A	385201	PASS	AB=0.516813;ABP=23.3827;AC=149;AF=0.792553;AN=188;AO=14221;CIGAR=1X;DP=18269;DPB=18269;DPRA=0;EPP=30874.8;EPPR=8767.08;GTI=0;LEN=1;MEANALT=1.08511;MQM=56.2855;MQMR=59.9658;NS=94;NUMALT=1;ODDS=0.567588;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=507031;QR=140101;RO=4040;RPL=6380;RPP=328.941;RPPR=9.75261;RPR=7841;RUN=1;SAF=6381;SAP=328.049;SAR=7840;SRF=2075;SRP=9.51397;SRR=1965;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:171:0,171:0:0:171:6108:-547.836,-51.4761,0	0/1:227:96,131:96:3290:131:4667:-348.831,0,-227.986	1/1:313:1,312:1:36:312:11077:-990.665,-90.6241,0	1/1:419:1,418:1:36:418:14880:-1332.95,-122.533,0	0/1:149:71,78:71:2478:78:2791:-205.449,0,-178.419	0/1:72:40,32:40:1406:32:1152:-81.8572,0,-105.162	0/1:240:121,119:121:4251:119:4160:-300.755,0,-310.524	1/1:344:1,343:1:36:343:12267:-1096.99,-99.956,0	1/1:312:0,312:0:0:312:11072:-993.889,-93.9214,0	1/1:196:0,196:0:0:196:6974:-626.392,-59.0019,0	1/1:59:0,59:0:0:59:2094:-188.488,-17.7608,0	1/1:177:0,177:0:0:177:6315:-567.118,-53.2823,0	0/1:152:80,72:80:2745:72:2560:-183.822,0,-201.539	0/1:103:38,65:38:1277:65:2319:-177.561,0,-84.2146	0/1:149:72,77:72:2506:77:2726:-200.238,0,-180.939	1/1:139:0,139:0:0:139:4911:-441.177,-41.8432,0	1/1:72:0,72:0:0:72:2576:-231.565,-21.6742,0	0/1:67:33,34:33:1127:34:1216:-89.1214,0,-81.5619	0/1:41:22,19:22:753:19:684:-49.4442,0,-55.7426	0/1:390:188,202:188:6556:202:7212:-530.698,0,-472.733	0/1:414:224,189:224:7829:189:6751:-481.58,0,-580.127	0/1:175:96,79:96:3340:79:2817:-200.932,0,-248.14	1/1:292:4,288:4:144:288:10254:-907.498,-74.5871,0	1/1:184:11,173:11:371:173:6170:-520.953,-21.6744,0	1/1:204:1,203:1:36:203:7273:-649.51,-57.8118,0	0/1:462:216,245:216:7564:245:8748:-647.579,0,-541.83	1/1:498:0,498:0:0:498:17838:-1601.28,-149.913,0	1/1:76:0,76:0:0:76:2703:-243.095,-22.8783,0	0/1:600:297,302:297:10270:302:10752:-786.123,0,-743.732	1/1:205:0,205:0:0:205:7317:-657.484,-61.7112,0	1/1:226:2,224:2:72:224:7958:-707.38,-61.1961,0	1/1:5:0,5:0:0:5:169:-15.5317,-1.50515,0	1/1:23:0,23:0:0:23:824:-74.3982,-6.92369,0	0/1:8:3,5:3:93:5:180:-14.1189,0,-6.26849	1/1:25:0,25:0:0:25:891:-79.9209,-7.52575,0	1/1:14:0,14:0:0:14:504:-45.6078,-4.21442,0	0/1:386:188,198:188:6506:198:7064:-518.368,0,-469.445	1/1:196:1,195:1:36:195:6957:-620.968,-55.4036,0	0/1:63:27,36:27:927:36:1284:-95.9105,0,-64.7734	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:261:123,138:123:4245:138:4923:-363.842,0,-303.665	1/1:43:0,43:0:0:43:1510:-135.748,-12.9443,0	1/1:407:1,406:1:36:406:14543:-1300.71,-118.921,0	1/1:101:0,101:0:0:101:3604:-324.215,-30.404,0	1/1:123:0,123:0:0:123:4404:-395.204,-37.0267,0	1/1:228:0,228:0:0:228:8072:-725.341,-68.6348,0	1/1:238:0,238:0:0:238:8517:-764.491,-71.6451,0	0/1:399:183,215:183:6286:215:7677:-570.134,0,-445.821	0/1:191:62,129:62:2165:129:4630:-358.698,0,-137.619	0/1:295:144,151:144:4940:151:5404:-397.167,0,-355.956	0/1:247:107,140:107:3762:140:5003:-375.626,0,-264.372	1/1:16:0,16:0:0:16:576:-52.1472,-4.81648,0	1/1:316:0,316:0:0:316:11264:-1012.03,-95.1255,0	1/1:100:0,100:0:0:100:3541:-318.612,-30.103,0	1/1:5:0,5:0:0:5:180:-16.498,-1.50515,0	1/1:305:3,302:3:96:302:10751:-956.423,-82.8561,0	1/1:106:1,105:1:27:105:3760:-335.246,-29.2094,0	1/1:12:0,12:0:0:12:432:-39.2047,-3.61236,0	0/1:28:14,14:14:485:14:496:-36.4413,0,-35.5481	1/1:189:1,188:1:36:188:6696:-597.826,-53.2964,0	1/1:145:2,143:2:72:143:5112:-452.705,-36.8126,0	1/1:8:0,8:0:0:8:288:-26.2441,-2.40824,0	1/1:378:0,378:0:0:378:13521:-1215.76,-113.789,0	0/1:419:208,209:208:7163:209:7421:-540.53,0,-518.983	1/1:129:2,127:2:72:127:4518:-399.172,-31.9961,0	1/1:175:0,175:0:0:175:6229:-560.157,-52.6803,0	1/1:419:0,419:0:0:419:14990:-1344.64,-126.132,0	0/1:264:169,95:169:5861:95:3387:-225.316,0,-447.29	1/1:55:0,55:0:0:55:1967:-176.407,-16.5567,0	1/1:149:0,149:0:0:149:5290:-474.348,-44.8535,0	1/1:88:0,88:0:0:88:3150:-283.199,-26.4906,0	1/1:54:0,54:0:0:54:1916:-172.23,-16.2556,0	0/1:213:87,126:87:3006:126:4500:-340.364,0,-206.653	0/1:208:92,115:92:3215:115:4095:-304.951,0,-227.048	1/1:344:0,344:0:0:344:12280:-1102.27,-103.554,0	1/1:448:0,448:0:0:448:16007:-1438.43,-134.861,0	0/1:298:155,142:155:5311:142:5054:-364.849,0,-388.048	1/1:289:3,286:3:104:286:10202:-906.587,-77.2949,0	1/1:29:0,29:0:0:29:1026:-92.3621,-8.72987,0	0/1:239:102,137:102:3529:137:4924:-370.885,0,-245.877	0/1:242:113,129:113:3903:129:4594:-339.896,0,-278.433	0/1:511:221,290:221:7707:290:10332:-773.871,0,-539.85	0/1:104:60,44:60:2064:44:1568:-109.8,0,-154.723	0/1:140:64,76:64:2230:76:2683:-198.982,0,-158.821	1/1:108:0,108:0:0:108:3805:-341.745,-32.5112,0	0/1:225:116,109:116:4052:109:3901:-282.173,0,-297.141	0/1:35:23,12:23:798:12:428:-27.9578,0,-61.6006	1/1:139:1,138:1:36:138:4917:-437.3,-38.2486,0	1/1:137:2,135:2:72:135:4809:-424.523,-34.4044,0	0/1:61:34,27:34:1204:27:968:-68.8693,0,-90.303	0/1:95:37,58:37:1293:58:2056:-156.397,0,-88.0711	0/1:120:73,47:73:2538:47:1684:-115.636,0,-192.548	1/1:325:1,324:1:36:324:11556:-1035.27,-94.2365,0	1/1:214:0,214:0:0:214:7583:-681.651,-64.4204,0
chr01	27826143	.	G	A	383244	PASS	AB=0.50308;ABP=3.70583;AC=149;AF=0.792553;AN=188;AO=14133;CIGAR=1X;DP=18362;DPB=18362;DPRA=0;EPP=30683.7;EPPR=9153.6;GTI=2;LEN=1;MEANALT=1.07447;MQM=56.2763;MQMR=59.9761;NS=94;NUMALT=1;ODDS=1.52944;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=504892;QR=148737;RO=4222;RPL=6381;RPP=291.809;RPPR=3.01853;RPR=7752;RUN=1;SAF=6382;SAP=290.967;SAR=7751;SRF=2107;SRP=3.04322;SRR=2115;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:171:0,171:0:0:171:6110:-547.966,-51.4761,0	0/1:225:97,128:97:3411:128:4578:-341.945,0,-239.475	1/1:312:0,312:0:0:312:11129:-998.839,-93.9214,0	1/1:418:1,417:1:36:417:14825:-1327.8,-122.232,0	0/1:155:79,76:79:2802:76:2720:-196.934,0,-205.758	0/1:73:41,32:41:1445:32:1129:-79.4903,0,-108.369	0/1:239:124,115:124:4415:115:4132:-298.2,0,-325.578	1/1:340:1,339:1:36:339:12114:-1082.93,-98.7519,0	1/1:307:0,307:0:0:307:10997:-986.942,-92.4162,0	1/1:200:0,200:0:0:200:7124:-639.346,-60.206,0	1/1:60:1,59:1:32:59:2112:-186.896,-14.8625,0	1/1:175:0,175:0:0:175:6279:-563.864,-52.6803,0	0/1:152:82,70:82:2882:70:2512:-179.168,0,-213.862	0/1:112:46,66:46:1569:66:2350:-177.632,0,-107.78	0/1:150:74,76:74:2635:76:2731:-200.373,0,-192.243	1/1:138:0,138:0:0:138:4943:-443.839,-41.5421,0	1/1:72:0,72:0:0:72:2572:-231.212,-21.6742,0	0/1:70:37,33:37:1273:33:1184:-85.3433,0,-93.7959	0/1:44:25,19:25:875:19:672:-47.4625,0,-65.8208	0/1:399:201,198:201:7122:198:7058:-514.214,0,-520.934	0/1:422:233,188:233:8190:188:6707:-475.623,0,-610.182	0/1:187:109,78:109:3854:78:2800:-195.784,0,-290.766	1/1:287:2,285:2:72:285:10148:-905.11,-79.5589,0	1/1:186:14,172:14:474:172:6158:-510.601,-13.0094,0	1/1:204:1,203:1:36:203:7265:-648.32,-57.8118,0	0/1:477:235,242:235:8211:242:8648:-634.021,0,-595.427	1/1:492:0,492:0:0:492:17617:-1580.7,-148.107,0	1/1:75:0,75:0:0:75:2687:-241.644,-22.5773,0	0/1:597:302,295:302:10670:295:10542:-768.163,0,-780.512	1/1:200:0,200:0:0:200:7112:-639.208,-60.206,0	1/1:225:2,223:2:72:223:7959:-707.648,-60.895,0	1/1:5:0,5:0:0:5:180:-16.5258,-1.50515,0	1/1:21:0,21:0:0:21:752:-67.9375,-6.32163,0	0/1:8:3,5:3:104:5:180:-14.1189,0,-7.29457	1/1:24:0,24:0:0:24:860:-77.1339,-7.22472,0	1/1:14:0,14:0:0:14:504:-45.6078,-4.21442,0	0/1:394:193,201:193:6832:201:7174:-525.556,0,-496.264	1/1:195:0,195:0:0:195:6950:-623.45,-58.7009,0	0/1:71:35,36:35:1204:36:1268:-92.0562,0,-87.2867	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:263:128,135:128:4507:135:4801:-352.255,0,-326.632	1/1:43:0,43:0:0:43:1508:-134.86,-12.9443,0	1/1:400:1,399:1:27:399:14232:-1273.75,-117.712,0	1/1:101:0,101:0:0:101:3599:-323.774,-30.404,0	1/1:123:0,123:0:0:123:4392:-394.546,-37.0267,0	1/1:227:0,227:0:0:227:8093:-726.786,-68.3338,0	1/1:236:1,235:1:36:235:8361:-746.841,-67.4448,0	0/1:400:190,209:190:6651:209:7485:-552.702,0,-477.97	0/1:187:60,127:60:2119:127:4553:-352.961,0,-134.686	0/1:303:153,150:153:5362:150:5358:-390.618,0,-391.505	0/1:252:114,138:114:4024:138:4939:-368.364,0,-286.433	1/1:17:0,17:0:0:17:612:-55.3811,-5.11751,0	1/1:316:0,315:0:0:315:11241:-1009.64,-94.8245,0	1/1:98:0,98:0:0:98:3504:-315.137,-29.5009,0	1/1:5:0,5:0:0:5:180:-16.498,-1.50515,0	1/1:302:0,302:0:0:302:10771:-966.795,-90.9111,0	1/1:107:0,107:0:0:107:3815:-343.075,-32.2102,0	1/1:12:0,12:0:0:12:432:-39.2047,-3.61236,0	0/1:27:13,14:13:468:14:504:-37.4647,0,-34.3318	1/1:189:0,189:0:0:189:6756:-606.802,-56.8947,0	1/1:146:2,144:2:72:144:5147:-455.935,-37.1137,0	1/1:8:0,8:0:0:8:288:-26.2441,-2.40824,0	1/1:376:0,376:0:0:376:13475:-1211.6,-113.187,0	0/1:417:209,207:209:7372:207:7409:-538.775,0,-538.056	1/1:128:1,127:1:36:127:4520:-402.358,-34.9336,0	1/1:176:0,176:0:0:176:6299:-566.165,-52.9813,0	1/1:413:0,413:0:0:413:14713:-1320.44,-124.325,0	0/1:273:177,96:177:6268:96:3424:-225.709,0,-481.183	1/1:55:1,54:1:36:54:1931:-169.577,-12.9584,0	1/1:149:0,149:0:0:149:5360:-480.384,-44.8535,0	1/1:89:0,89:0:0:89:3175:-285.479,-26.7917,0	1/1:55:0,55:0:0:55:1966:-176.726,-16.5567,0	0/1:211:89,122:89:3144:122:4365:-328.845,0,-219.669	0/1:207:92,115:92:3250:115:4093:-304.722,0,-230.41	1/1:340:1,339:1:36:339:12140:-1086.22,-98.7519,0	1/1:444:0,444:0:0:444:15839:-1423.34,-133.657,0	0/1:305:162,143:162:5661:143:5115:-368.132,0,-417.806	1/1:293:3,290:3:108:290:10324:-916.813,-78.1266,0	1/1:29:0,29:0:0:29:1035:-93.1732,-8.72987,0	0/1:243:105,138:105:3735:138:4938:-370.963,0,-263.202	0/1:250:120,130:120:4251:130:4664:-343.8,0,-307.513	0/1:519:231,287:231:8128:287:10276:-765.396,0,-575.402	0/1:109:64,45:64:2231:45:1596:-110.812,0,-168.24	0/1:148:70,78:70:2504:78:2804:-207.454,0,-181.06	1/1:108:0,108:0:0:108:3867:-347.195,-32.5112,0	0/1:230:121,108:121:4263:108:3856:-276.576,0,-314.557	0/1:35:22,13:22:758:13:449:-29.8337,0,-58.0006	1/1:139:0,139:0:0:139:4984:-446.907,-41.8432,0	1/1:137:0,137:0:0:137:4892:-438.987,-41.2411,0	0/1:61:34,27:34:1203:27:964:-68.5137,0,-90.2122	0/1:100:42,57:42:1474:57:2040:-153.448,0,-102.938	0/1:123:75,48:75:2653:48:1724:-118.331,0,-201.989	1/1:324:1,323:1:36:323:11571:-1036.61,-93.9354,0	1/1:214:0,214:0:0:214:7659:-688.44,-64.4204,0
chr01	27826152	.	G	A	368592	PASS	AB=0.486601;ABP=16.278;AC=149;AF=0.792553;AN=188;AO=13689;CIGAR=1X;DP=18100;DPB=18100;DPRA=0;EPP=29476.9;EPPR=9505.5;GTI=3;LEN=1;MEANALT=1.03191;MQM=56.3847;MQMR=59.9757;NS=94;NUMALT=1;ODDS=2.30063;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=486922;QR=155949;RO=4408;RPL=6076;RPP=377.751;RPPR=55.3641;RPR=7613;RUN=1;SAF=6047;SAP=406.566;SAR=7642;SRF=2033;SRP=60.6292;SRR=2375;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:165:1,164:1:36:164:5809:-517.727,-46.0717,0	0/1:234:109,125:109:3871:125:4431:-325.749,0,-278.146	1/1:304:0,304:0:0:304:10806:-970.154,-91.5131,0	1/1:405:4,401:4:140:401:14262:-1268.04,-108.973,0	0/1:154:79,74:79:2784:74:2644:-191.735,0,-204.546	0/1:73:42,31:42:1491:31:1108:-77.9761,0,-112.509	0/1:233:121,112:121:4289:112:3981:-287.084,0,-316.047	1/1:337:1,336:1:36:336:11945:-1068.08,-97.8488,0	1/1:295:0,295:0:0:295:10532:-945.295,-88.8039,0	1/1:191:0,191:0:0:191:6801:-610.681,-57.4967,0	1/1:57:0,57:0:0:57:2027:-182.465,-17.1587,0	1/1:172:0,172:0:0:172:6134:-550.824,-51.7772,0	0/1:151:83,68:83:2908:68:2384:-168.536,0,-216.499	0/1:106:45,61:45:1597:61:2163:-162.192,0,-112.109	0/1:147:71,76:71:2523:76:2707:-199.117,0,-183.071	1/1:135:0,135:0:0:135:4819:-432.594,-40.6391,0	1/1:70:0,70:0:0:70:2486:-223.749,-21.0721,0	0/1:71:38,33:38:1336:33:1188:-85.4642,0,-99.164	0/1:44:26,18:26:923:18:640:-44.5932,0,-70.1414	0/1:398:207,191:207:7328:191:6754:-487.164,0,-539.766	0/1:431:252,179:252:8885:179:6382:-443.052,0,-669.858	0/1:193:115,78:115:4088:78:2784:-192.538,0,-310.007	1/1:281:2,279:2:72:279:9941:-885.901,-77.7527,0	1/1:179:14,165:14:500:165:5870:-482.397,-8.54819,0	1/1:201:1,200:1:36:200:7095:-633.215,-56.9088,0	0/1:492:254,238:254:8961:238:8511:-617.473,0,-658.371	1/1:473:0,473:0:0:473:16818:-1510.27,-142.387,0	1/1:74:0,74:0:0:74:2634:-236.92,-22.2762,0	0/1:616:323,293:323:11449:293:10393:-749.327,0,-844.862	1/1:199:0,199:0:0:199:7091:-637.48,-59.905,0	1/1:208:3,205:3:108:205:7300:-645.708,-52.5391,0	1/1:4:0,4:0:0:4:144:-13.3052,-1.20412,0	1/1:23:0,23:0:0:23:828:-74.7541,-6.92369,0	0/1:8:3,5:3:108:5:180:-14.1189,0,-7.66693	1/1:24:0,24:0:0:24:860:-77.1388,-7.22472,0	1/1:13:0,13:0:0:13:464:-42.0203,-3.91339,0	0/1:397:203,194:203:7182:194:6930:-502.844,0,-526.917	1/1:190:0,190:0:0:190:6754:-606.403,-57.1957,0	0/1:67:35,32:35:1220:32:1148:-82.4839,0,-89.9317	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:274:138,136:138:4868:136:4843:-352.681,0,-355.794	1/1:37:0,37:0:0:37:1319:-117.88,-11.1381,0	1/1:393:2,391:2:72:391:13938:-1244.02,-111.468,0	1/1:98:0,98:0:0:98:3488:-313.801,-29.5009,0	1/1:115:1,114:1:36:114:4035:-358.67,-31.0202,0	1/1:207:2,205:2:72:205:7281:-647.078,-55.4765,0	1/1:224:1,223:1:32:223:7938:-709.34,-64.2314,0	0/1:409:202,207:202:7161:207:7348:-537.494,0,-520.807	0/1:196:65,131:65:2298:131:4652:-359.259,0,-148.076	0/1:303:157,145:157:5545:145:5165:-373.252,0,-407.909	0/1:247:111,136:111:3903:136:4822:-359.343,0,-277.113	1/1:17:0,17:0:0:17:603:-54.5672,-5.11751,0	1/1:307:0,307:0:0:307:10961:-984.815,-92.4162,0	1/1:89:0,89:0:0:89:3173:-285.465,-26.7917,0	1/1:5:0,5:0:0:5:180:-16.498,-1.50515,0	1/1:294:0,294:0:0:294:10441:-937.779,-88.5028,0	1/1:100:0,100:0:0:100:3577:-321.618,-30.103,0	1/1:12:0,12:0:0:12:432:-39.2047,-3.61236,0	0/1:29:14,15:14:487:15:531:-39.2886,0,-35.4293	1/1:185:0,185:0:0:185:6562:-589.361,-55.6906,0	1/1:143:3,140:3:108:140:4959:-435.806,-32.9721,0	1/1:8:0,8:0:0:8:284:-25.8829,-2.40824,0	1/1:370:1,369:1:36:369:13089:-1173.25,-107.783,0	0/1:427:222,205:222:7900:205:7307:-527.374,0,-582.49	1/1:126:1,125:1:36:125:4385:-390.435,-34.3315,0	1/1:170:0,170:0:0:170:6031:-542.442,-51.1751,0	1/1:404:0,404:0:0:404:14401:-1292.62,-121.616,0	0/1:275:184,91:184:6523:91:3260:-210.383,0,-504.376	1/1:51:0,51:0:0:51:1820:-163.434,-15.3525,0	1/1:142:0,142:0:0:142:5039:-452.179,-42.7463,0	1/1:85:0,85:0:0:85:3028:-272.169,-25.5876,0	1/1:52:0,52:0:0:52:1856:-166.943,-15.6536,0	0/1:210:92,118:92:3252:118:4191:-313.587,0,-229.685	0/1:203:94,109:94:3317:109:3888:-287.506,0,-237.641	1/1:325:0,325:0:0:325:11562:-1038.11,-97.8348,0	1/1:431:0,431:0:0:431:15287:-1374.04,-129.744,0	0/1:306:170,136:170:5998:136:4857:-344.574,0,-447.797	1/1:284:4,280:4:144:280:9980:-882.867,-72.1789,0	1/1:28:0,28:0:0:28:983:-88.6061,-8.42884,0	0/1:244:111,133:111:3959:133:4755:-354.212,0,-283.051	0/1:247:121,126:121:4260:126:4460:-326.399,0,-309.142	0/1:516:237,278:237:8408:278:9875:-730.659,0,-601.343	0/1:109:68,41:68:2384:41:1450:-97.7586,0,-182.005	0/1:144:69,75:69:2472:75:2660:-195.735,0,-179.385	1/1:103:0,103:0:0:103:3687:-331.278,-31.0061,0	0/1:230:125,105:125:4384:105:3734:-265.673,0,-325.501	0/1:35:23,12:23:816:12:415:-26.7814,0,-63.2257	1/1:135:0,135:0:0:135:4798:-430.253,-40.6391,0	1/1:126:1,125:1:36:125:4455:-396.256,-34.351,0	0/1:59:33,26:33:1180:26:932:-66.241,0,-88.7473	0/1:100:42,58:42:1480:58:2057:-154.897,0,-103.389	0/1:126:79,47:79:2803:47:1688:-114.187,0,-214.581	1/1:317:1,316:1:36:316:11238:-1006.71,-91.8282,0	1/1:209:0,209:0:0:209:7402:-665.496,-62.9153,0
chr01	28374869	.	G	T	133163	PASS	AB=0.481443;ABP=14.5349;AC=149;AF=0.792553;AN=188;AO=6277;CIGAR=1X;DP=8279;DPB=8279;DPRA=0;EPP=13598.6;EPPR=4328.6;GTI=3;LEN=1;MEANALT=1.02128;MQM=59.9683;MQMR=59.961;NS=94;NUMALT=1;ODDS=0.845304;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=224150;QR=69983;RO=2000;RPL=4;RPP=13598.6;RPPR=4328.6;RPR=6273;RUN=1;SAF=0;SAP=13633.3;SAR=6277;SRF=0;SRP=4345.96;SRR=2000;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:42:0,42:0:0:42:1500:-135.295,-12.6433,0	0/1:30:12,18:12:420:18:640:-48.8984,0,-29.1031	1/1:92:0,92:0:0:92:3273:-294.682,-27.6948,0	1/1:157:0,157:0:0:157:5601:-504.214,-47.2617,0	0/1:78:41,37:41:1460:37:1332:-96.702,0,-108.216	0/1:57:32,25:32:1098:25:888:-63.0803,0,-81.963	0/1:115:65,49:65:2268:49:1752:-123.286,0,-169.705	1/1:122:0,122:0:0:122:4378:-394.16,-36.7257,0	1/1:89:0,89:0:0:89:3173:-285.794,-26.7917,0	1/1:39:0,39:0:0:39:1396:-125.937,-11.7402,0	1/1:110:0,110:0:0:110:3935:-354.343,-33.1133,0	1/1:135:1,133:1:36:133:4751:-424.15,-37.0996,0	0/1:89:36,53:36:1252:53:1885:-143.135,0,-86.1876	0/1:120:60,60:60:2090:60:2119:-154.855,0,-152.244	0/1:80:37,43:37:1305:43:1531:-114,0,-93.6623	1/1:95:0,95:0:0:95:3400:-306.215,-28.5979,0	1/1:56:0,56:0:0:56:1971:-177.665,-16.8577,0	0/1:30:11,19:11:372:19:676:-52.1371,0,-24.7729	0/1:44:22,22:22:784:22:784:-57.6386,0,-57.6386	0/1:165:84,81:84:2965:81:2884:-210.125,0,-217.414	0/1:122:51,71:51:1807:71:2544:-192.485,0,-126.185	0/1:108:85,23:85:3022:23:816:-41.2505,0,-239.699	1/1:110:0,110:0:0:110:3936:-354.432,-33.1133,0	0/1:56:6,50:6:216:50:1791:-144.615,0,-2.93283	1/1:48:0,48:0:0:48:1715:-154.635,-14.4494,0	0/1:189:112,77:112:3948:77:2744:-190.309,0,-298.62	1/1:228:0,228:0:0:228:8152:-733.637,-68.6348,0	1/1:54:0,54:0:0:54:1902:-171.454,-16.2556,0	0/1:155:93,62:93:3254:62:2232:-154.484,0,-246.42	1/1:88:0,88:0:0:88:3130:-281.926,-26.4906,0	1/1:109:0,109:0:0:109:3903:-351.464,-32.8123,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	1/1:15:1,14:1:36:14:500:-41.7379,-0.917175,0	1/1:10:0,10:0:0:10:352:-32.0182,-3.0103,0	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	0/1:221:114,107:114:3943:107:3826:-278.008,0,-288.539	1/1:105:0,105:0:0:105:3768:-339.318,-31.6082,0	0/1:83:35,48:35:1210:48:1699:-128.21,0,-84.1956	0/1:7:4,3:4:140:3:108:-7.96796,0,-10.8374	0/1:95:53,42:53:1842:42:1495:-106.246,0,-137.455	1/1:49:0,49:0:0:49:1764:-159.044,-14.7505,0	1/1:164:0,164:0:0:164:5844:-526.073,-49.3689,0	1/1:63:0,63:0:0:63:2245:-202.299,-18.9649,0	1/1:67:0,67:0:0:67:2404:-216.616,-20.169,0	1/1:61:0,61:0:0:61:2192:-197.545,-18.3628,0	1/1:112:0,112:0:0:112:3982:-358.568,-33.7154,0	0/1:140:70,70:70:2474:70:2512:-184.178,0,-180.77	0/1:100:60,40:60:2123:40:1432:-99.0746,0,-161.235	0/1:108:55,53:55:1949:53:1908:-139.486,0,-143.173	0/1:132:61,71:61:2134:71:2548:-189.834,0,-152.589	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:86:0,86:0:0:86:3068:-276.348,-25.8886,0	1/1:64:0,64:0:0:64:2256:-203.301,-19.2659,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:104:0,104:0:0:104:3723:-335.271,-31.3071,0	1/1:56:0,56:0:0:56:2002:-180.452,-16.8577,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:94:0,94:0:0:94:3366:-303.155,-28.2968,0	1/1:142:0,142:0:0:142:5056:-455.186,-42.7463,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:117:0,117:0:0:117:4192:-377.461,-35.2205,0	0/1:117:60,57:60:2108:57:2044:-149.011,0,-154.681	1/1:70:0,70:0:0:70:2512:-226.324,-21.0721,0	1/1:75:0,75:0:0:75:2684:-241.805,-22.5773,0	1/1:60:0,60:0:0:60:2156:-194.307,-18.0618,0	0/1:95:67,28:67:2346:28:995:-61.2662,0,-182.795	1/1:99:0,99:0:0:99:3480:-313.407,-29.802,0	1/1:56:0,56:0:0:56:2012:-181.353,-16.8577,0	1/1:77:0,77:0:0:77:2730:-245.942,-23.1793,0	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	0/1:110:63,47:63:2204:47:1678:-118.194,0,-165.511	0/1:61:21,40:21:728:40:1413:-109.102,0,-47.4749	1/1:164:0,164:0:0:164:5860:-527.511,-49.3689,0	1/1:174:0,174:0:0:174:6232:-560.969,-52.3792,0	0/1:84:39,45:39:1383:45:1605:-119.452,0,-99.4815	1/1:143:1,142:1:36:142:5045:-450.597,-39.449,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:123:69,54:69:2405:54:1935:-137.399,0,-179.678	0/1:88:42,46:42:1460:46:1641:-121.486,0,-105.201	0/1:149:80,69:80:2824:69:2472:-177.88,0,-209.545	0/1:47:21,26:21:714:26:936:-70.4111,0,-50.4247	0/1:85:33,52:33:1140:52:1860:-142.092,0,-77.3148	1/1:40:0,40:0:0:40:1432:-129.153,-12.0412,0	0/1:139:76,63:76:2661:63:2255:-161.369,0,-197.891	0/1:20:13,7:13:444:7:243:-16.1869,0,-34.2635	1/1:88:0,88:0:0:88:3143:-283.095,-26.4906,0	1/1:92:0,92:0:0:92:3292:-296.499,-27.6948,0	0/1:108:49,59:49:1710:59:2107:-157.388,0,-121.67	0/1:184:82,102:82:2796:102:3644:-272.776,0,-196.487	0/1:115:81,34:81:2804:34:1220:-75.4884,0,-217.977	1/1:138:0,138:0:0:138:4909:-441.961,-41.5421,0	1/1:128:0,128:0:0:128:4575:-411.915,-38.5318,0
chr01	28374885	.	C	T	35921.6	PASS	AB=0.528116;ABP=30.1174;AC=39;AF=0.207447;AN=188;AO=2087;CIGAR=1X;DP=8402;DPB=8402;DPRA=1.2361;EPP=4517.52;EPPR=13672.5;GTI=4;LEN=1;MEANALT=1;MQM=59.9233;MQMR=59.9698;NS=94;NUMALT=1;ODDS=0.376871;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74706;QR=225546;RO=6315;RPL=2085;RPP=4517.52;RPPR=13672.5;RPR=2;RUN=1;SAF=0;SAP=4534.87;SAR=2087;SRF=0;SRP=13715.9;SRR=6315;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:46:46,0:46:1630:0:0:0,-13.8474,-146.987	0/1:33:20,13:20:720:13:464:-32.1635,0,-55.1948	0/0:96:96,0:96:3409:0:0:0,-28.8989,-306.465	0/0:155:155,0:155:5534:0:0:0,-46.6596,-498.185	0/1:82:39,43:39:1379:43:1544:-114.569,0,-99.7235	0/1:56:24,32:24:852:32:1148:-86.7722,0,-60.1427	0/1:115:48,67:48:1711:67:2363:-178.311,0,-119.657	0/0:124:124,0:124:4436:0:0:0,-37.3277,-399.408	0/0:86:86,0:86:3080:0:0:0,-25.8886,-277.428	0/0:40:40,0:40:1423:0:0:0,-12.0412,-128.364	0/0:110:110,0:110:3931:0:0:0,-33.1133,-353.982	0/0:138:138,0:138:4935:0:0:0,-41.5421,-444.299	0/1:92:51,41:51:1810:41:1472:-105.081,0,-135.485	0/1:125:60,65:60:2144:65:2323:-171.701,0,-155.599	0/1:83:43,40:43:1548:40:1432:-104.159,0,-114.628	0/0:94:94,0:94:3372:0:0:0,-28.2968,-303.695	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/1:30:19,11:19:684:11:396:-26.9518,0,-52.8594	0/1:44:22,22:22:788:22:788:-57.9971,0,-57.9995	0/1:171:85,86:85:3047:86:3076:-225.593,0,-222.982	0/1:124:70,54:70:2486:54:1925:-136.198,0,-186.665	0/1:112:24,88:24:856:88:3157:-250.638,0,-43.6457	0/0:110:110,0:110:3927:0:0:0,-33.1133,-353.623	0/1:59:53,6:53:1904:6:216:-2.02974,0,-153.869	0/0:46:46,0:46:1639:0:0:0,-13.8474,-147.798	0/1:193:77,116:77:2744:116:4164:-316.843,0,-189.104	0/0:225:225,0:225:8037:0:0:0,-67.7317,-723.294	0/0:56:56,0:56:1996:0:0:0,-16.8577,-179.914	0/1:156:63,93:63:2240:93:3340:-253.856,0,-154.903	0/0:91:91,0:91:3239:0:0:0,-27.3937,-291.732	0/0:106:106,0:106:3778:0:0:0,-31.9092,-340.219	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/0:16:15,1:15:540:1:36:0,-1.2182,-45.3383	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:22:22,0:22:780:0:0:0,-6.62266,-70.523	0/1:220:105,115:105:3754:115:4127:-304.365,0,-271.832	0/0:103:103,0:103:3663:0:0:0,-31.0061,-329.875	0/1:82:47,35:47:1684:35:1256:-88.6432,0,-127.163	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:100:45,55:45:1607:55:1972:-147.623,0,-114.816	0/0:51:51,0:51:1824:0:0:0,-15.3525,-164.441	0/0:161:161,0:161:5740:0:0:0,-48.4658,-516.716	0/0:64:64,0:64:2288:0:0:0,-19.2659,-206.163	0/0:71:71,0:71:2532:0:0:0,-21.3731,-228.127	0/0:59:59,0:59:2103:0:0:0,-17.7608,-189.539	0/0:118:118,0:118:4222:0:0:0,-35.5215,-380.14	0/1:144:72,72:72:2588:72:2568:-188.022,0,-189.803	0/1:100:41,59:41:1456:59:2112:-160.246,0,-101.233	0/1:107:51,56:51:1820:56:2000:-148.063,0,-131.871	0/1:136:71,65:71:2527:65:2332:-169.199,0,-186.741	0/0:13:13,0:13:459:0:0:0,-3.91339,-41.6441	0/0:87:87,0:87:3101:0:0:0,-26.1896,-279.316	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.901	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:103:103,0:103:3663:0:0:0,-31.0061,-329.875	0/0:55:55,0:55:1964:0:0:0,-16.5566,-177.035	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:93:93,0:93:3331:0:0:0,-27.9958,-300.002	0/0:144:144,0:144:5163:0:0:0,-43.3483,-464.809	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:121:121,0:121:4331:0:0:0,-36.4246,-389.965	0/1:119:56,63:56:2008:63:2264:-168.163,0,-145.171	0/0:72:72,0:72:2588:0:0:0,-21.6742,-233.16	0/0:74:74,0:74:2639:0:0:0,-22.2762,-237.757	0/0:61:61,0:61:2165:0:0:0,-18.3628,-195.115	0/1:99:28,71:28:1004:71:2533:-198.414,0,-60.8739	0/0:99:99,0:99:3540:0:0:0,-29.802,-318.807	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.274	0/0:77:77,0:77:2764:0:0:0,-23.1793,-248.999	0/0:19:19,0:19:671:0:0:0,-5.71957,-60.7158	0/1:114:49,65:49:1752:65:2336:-176.182,0,-123.647	0/1:63:38,25:38:1360:25:881:-60.6289,0,-103.736	0/0:165:165,0:165:5902:0:0:0,-49.6699,-531.289	0/0:178:178,0:178:6355:0:0:0,-53.5833,-572.039	0/1:89:45,44:45:1616:44:1561:-113.976,0,-118.938	0/0:143:142,1:142:5065:1:36:0,-39.449,-452.388	0/0:17:17,0:17:591:0:0:0,-5.11751,-53.5153	0/1:124:53,71:53:1880:71:2544:-191.883,0,-132.151	0/1:96:47,49:47:1688:49:1752:-129.065,0,-123.308	0/1:152:70,82:70:2495:82:2929:-218.087,0,-179.046	0/1:49:27,22:27:959:22:788:-56.4943,0,-71.8749	0/1:91:52,39:52:1863:39:1392:-98.1853,0,-140.555	0/0:41:41,0:41:1460:0:0:0,-12.3422,-131.566	0/1:139:62,77:62:2208:77:2768:-207.518,0,-157.142	0/1:22:8,14:8:288:14:504:-39.0754,0,-19.6447	0/0:88:88,0:88:3160:0:0:0,-26.4906,-284.624	0/0:92:92,0:92:3267:0:0:0,-27.6948,-294.252	0/1:110:58,52:58:2084:52:1864:-134.926,0,-154.717	0/1:188:101,87:101:3611:87:3111:-223.621,0,-268.602	0/1:118:34,84:34:1216:84:3016:-236.149,0,-74.225	0/0:141:141,0:141:5039:0:0:0,-42.4452,-453.656	0/0:130:130,0:130:4641:0:0:0,-39.1339,-417.852
chr01	28381909	.	G	A	38092.1	PASS	AB=0.702133;ABP=2848.13;AC=102;AF=0.542553;AN=188;AO=6353;CIGAR=1X;DP=8786;DPB=8786;DPRA=0;EPP=13798.4;EPPR=5227.61;GTI=21;LEN=1;MEANALT=1.11702;MQM=22.1144;MQMR=59.7572;NS=94;NUMALT=1;ODDS=0.0220906;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=227208;QR=86405;RO=2418;RPL=6353;RPP=13798.4;RPPR=5253.63;RPR=0;RUN=1;SAF=0;SAP=13798.4;SAR=6353;SRF=3;SRP=5227.61;SRR=2415;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:13,32:13:464:32:1136:-67.1031,0,-28.5512	0/1:92:37,55:37:1324:55:1972:-85.4864,0,-91.749	0/1:155:46,109:46:1640:109:3908:-224.136,0,-101.229	0/1:100:22,78:22:779:78:2800:-100.78,0,-40.3244	0/1:57:14,43:14:504:43:1540:-62.199,0,-28.5394	0/1:56:24,32:24:860:32:1140:-49.3532,0,-60.8642	0/1:56:35,21:35:1260:21:756:-18.0677,0,-96.8203	0/1:163:48,115:48:1724:115:4124:-237.613,0,-106.364	0/1:126:16,110:16:576:110:3921:-235.319,0,-14.2406	0/1:101:28,73:28:996:73:2608:-91.0455,0,-59.5509	0/1:67:27,40:27:959:40:1432:-44.5503,0,-66.4564	0/1:110:13,97:13:468:97:3475:-207.391,0,-9.34634	0/1:89:22,67:22:784:67:2408:-112.216,0,-42.8122	0/1:86:33,53:33:1172:53:1888:-63.6683,0,-79.8852	0/1:60:25,33:25:896:33:1184:-39.9107,0,-63.308	0/1:66:9,57:9:315:57:2048:-104.19,0,-8.81925	0/1:78:42,36:42:1504:36:1296:-65.796,0,-112.174	0/1:48:7,41:7:248:41:1472:-73.4836,0,-8.21475	0/1:31:5,26:5:180:26:936:-49.5369,0,-7.22013	0/1:111:37,74:37:1316:74:2629:-91.1737,0,-85.3137	1/1:193:15,178:15:536:178:6380:-256.306,-9.53778,0	0/1:90:63,27:63:2256:27:968:-11.2667,0,-176.154	1/1:135:5,130:5:180:130:4664:-204.797,-24.087,0	0/1:66:24,42:24:860:42:1508:-69.4919,0,-57.8539	0/1:121:27,94:27:960:94:3360:-161.499,0,-50.2916	0/1:216:102,114:102:3660:114:4062:-90.9432,0,-264.576	0/1:199:31,168:31:1116:168:6024:-295.262,0,-40.8467	0/1:39:4,35:4:144:35:1248:-62.5161,0,-1.57345	0/1:244:90,154:90:3204:154:5469:-140.851,0,-214.588	0/1:126:19,107:19:684:107:3832:-190.997,0,-23.9605	0/1:93:37,56:37:1316:56:2000:-72.2335,0,-90.746	0/1:51:5,46:5:180:46:1648:-83.1403,0,-1.18553	0/1:37:12,25:12:428:25:892:-41.8875,0,-27.7207	0/1:18:12,6:12:428:6:216:-7.03753,0,-33.4403	1/1:94:6,88:6:216:88:3148:-197.467,-8.50631,0	0/1:24:9,15:9:320:15:536:-29.3809,0,-21.9176	0/1:167:76,91:76:2712:91:3240:-74.2135,0,-193.923	0/1:168:46,122:46:1637:122:4341:-217.681,0,-97.0299	0/1:52:10,42:10:360:42:1496:-77.3688,0,-17.0907	0/1:8:1,7:1:36:7:252:-13.7982,0,-1.19003	0/1:128:53,75:53:1888:75:2692:-89.0774,0,-131.667	0/1:40:11,28:11:392:28:1004:-50.572,0,-23.6413	0/1:182:19,163:19:680:163:5844:-294.039,0,-5.19665	0/1:52:8,43:8:288:43:1540:-56.0677,0,-10.7155	0/1:71:15,56:15:540:56:2004:-77.2658,0,-27.5634	0/1:103:14,89:14:500:89:3180:-86.771,0,-14.3301	0/1:183:29,154:29:1040:154:5516:-331.355,0,-38.8259	0/1:104:45,59:45:1608:59:2101:-74.0761,0,-113.518	0/1:75:24,51:24:864:51:1824:-62.933,0,-55.5053	0/1:67:13,54:13:460:54:1924:-74.4649,0,-21.5664	0/1:95:31,64:31:1108:64:2292:-61.5304,0,-71.4285	1/1:58:0,58:0:0:58:2072:-94.1904,-17.4597,0	0/1:92:18,73:18:648:73:2624:-153.383,0,-30.98	0/1:43:14,29:14:504:29:1040:-21.9539,0,-32.7538	0/1:23:12,11:12:428:11:396:-20.4383,0,-31.9213	0/1:154:43,111:43:1540:111:3984:-190.815,0,-92.5345	1/1:31:0,31:0:0:31:1108:-53.1115,-9.33193,0	1/1:47:2,45:2:72:45:1616:-55.6174,-7.31169,0	0/1:12:5,7:5:180:7:252:-5.14732,0,-12.9397	0/1:74:22,52:22:780:52:1856:-89.1513,0,-48.2468	0/1:163:74,87:74:2656:87:3108:-95.5479,0,-190.636	1/1:39:2,37:2:72:37:1332:-57.3839,-4.90345,0	1/1:172:15,157:15:540:157:5570:-155.355,-2.84062,0	0/1:141:74,67:74:2644:67:2400:-66.951,0,-195.752	0/1:68:19,49:19:680:49:1722:-85.6268,0,-41.0591	0/1:103:22,81:22:788:81:2864:-107.889,0,-40.2249	0/1:175:21,154:21:752:154:5484:-214.822,0,-15.326	0/1:90:40,50:40:1436:50:1773:-66.5943,0,-102.445	0/1:43:7,36:7:252:36:1296:-66.9306,0,-10.0847	0/1:32:15,17:15:540:17:604:-32.8042,0,-39.3036	0/1:75:49,26:49:1747:26:932:-16.1912,0,-134.936	0/1:32:13,18:13:460:18:625:-21.1551,0,-32.2117	0/1:141:76,65:76:2708:65:2316:-90.7643,0,-201.519	0/1:94:18,76:18:636:76:2728:-121.802,0,-29.2712	0/1:173:50,123:50:1772:123:4369:-212.876,0,-107.675	0/1:200:59,141:59:2104:141:5068:-177.025,0,-129.424	0/1:128:23,105:23:828:105:3768:-177.366,0,-35.5004	0/1:82:14,68:14:500:68:2432:-144.674,0,-20.6517	0/1:50:16,34:16:576:34:1220:-70.3597,0,-37.1235	0/1:116:39,77:39:1392:77:2764:-100.008,0,-90.6549	0/1:157:15,142:15:540:142:5092:-241.823,0,-1.67483	0/1:184:88,96:88:3137:96:3440:-108.888,0,-225.816	0/1:80:54,26:54:1923:26:936:-21.05,0,-149.264	0/1:42:12,30:12:432:30:1076:-40.4173,0,-26.5779	0/1:70:22,48:22:784:48:1724:-57.0059,0,-49.8118	0/1:66:13,52:13:460:52:1864:-70.4402,0,-21.9766	0/1:31:8,23:8:284:23:824:-34.6215,0,-16.5714	0/1:81:16,63:16:572:63:2260:-131.292,0,-25.8091	0/1:78:13,64:13:468:64:2283:-136.765,0,-19.0006	0/1:29:9,20:9:320:20:716:-22.6996,0,-20.4125	0/1:129:18,110:18:640:110:3948:-158.077,0,-19.2558	0/1:22:2,20:2:72:20:712:-31.1731,0,-0.214062	0/1:113:13,100:13:464:100:3584:-136.195,0,-8.08112	0/1:115:14,99:14:504:99:3548:-134.125,0,-11.4798
chr01	28564990	.	TTTTGGG	TTTCGGG	91754.1	PASS	AB=0.704969;ABP=238.015;AC=175;AF=0.930851;AN=188;AO=3534;CIGAR=3M1X3M;DP=3814;DPB=3814.29;DPRA=0;EPP=1833.51;EPPR=134.807;GTI=2;LEN=1;MEANALT=1.62766;MQM=54.7609;MQMR=59.1823;NS=94;NUMALT=1;ODDS=3.09226;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121957;QR=6863;RO=203;RPL=3534;RPP=7676.99;RPPR=443.819;RPR=0;RUN=1;SAF=904;SAP=1833.51;SAR=2630;SRF=46;SRP=134.807;SRR=157;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:12:0,12:0:0:12:428:-38.7974,-3.61236,0	1/1:66:0,66:0:0:66:2303:-205.941,-19.868,0	1/1:30:0,28:0:0:28:964:-85.611,-8.42884,0	1/1:43:0,42:0:0:42:1457:-130.189,-12.6433,0	1/1:33:0,33:0:0:33:1143:-102.489,-9.93399,0	1/1:29:0,29:0:0:29:1002:-90.0781,-8.72987,0	1/1:38:0,38:0:0:38:1327:-118.693,-11.4391,0	1/1:42:0,42:0:0:42:1467:-131.672,-12.6433,0	1/1:27:0,24:0:0:24:839:-75.2744,-7.22472,0	1/1:17:0,17:0:0:17:586:-52.7726,-5.11751,0	1/1:51:0,50:0:0:50:1646:-145.824,-15.0515,0	1/1:32:0,32:0:0:32:1108:-99.4751,-9.63296,0	1/1:63:0,63:0:0:63:2105:-188.322,-18.9649,0	1/1:43:0,43:0:0:43:1481:-133.087,-12.9443,0	1/1:44:0,43:0:0:43:1438:-127.923,-12.9443,0	1/1:29:0,29:0:0:29:981:-88.1289,-8.72987,0	1/1:34:0,34:0:0:34:1168:-103.958,-10.235,0	1/1:63:0,61:0:0:61:2057:-182.919,-18.3628,0	1/1:36:0,34:0:0:34:1148:-102.033,-10.235,0	1/1:53:0,50:0:0:50:1751:-156.812,-15.0515,0	1/1:42:0,42:0:0:42:1470:-131.646,-12.6433,0	1/1:45:0,44:0:0:44:1544:-138.328,-13.2453,0	1/1:13:0,13:0:0:13:449:-39.8478,-3.91339,0	0/1:41:10,28:10:355:28:976:-75.6091,0,-20.5142	1/1:17:0,16:0:0:16:567:-50.9248,-4.81648,0	0/1:85:16,68:16:552:68:2395:-189.177,0,-24.4579	1/1:46:0,45:0:0:45:1574:-141.401,-13.5464,0	0/1:19:3,15:3:92:15:509:-39.8482,0,-2.87579	1/1:63:0,63:0:0:63:2231:-199.879,-18.9649,0	1/1:25:0,23:0:0:23:805:-72.2621,-6.92369,0	0/1:51:16,35:16:553:35:1209:-92.7348,0,-34.7436	1/1:28:1,27:1:35:27:952:-81.5371,-4.93021,0	1/1:55:0,55:0:0:55:1955:-175.864,-16.5567,0	1/1:88:3,84:3:98:84:2882:-247.94,-17.387,0	1/1:75:0,73:0:0:73:2507:-223.148,-21.9752,0	1/1:58:4,53:4:139:53:1822:-149.796,-4.59889,0	1/1:50:0,48:0:0:48:1684:-150.547,-14.4494,0	1/1:29:0,29:0:0:29:1031:-92.8284,-8.72987,0	1/1:55:0,52:0:0:52:1799:-160.67,-15.6536,0	1/1:28:0,27:0:0:27:937:-84.0994,-8.12781,0	1/1:60:4,56:4:138:56:1931:-159.651,-5.30565,0	0/1:18:2,14:2:70:14:477:-37.4887,0,-1.52219	1/1:49:0,49:0:0:49:1730:-155.382,-14.7505,0	1/1:33:0,32:0:0:32:990:-86.2572,-9.63296,0	1/1:35:0,34:0:0:34:1109:-97.2203,-10.235,0	1/1:25:0,25:0:0:25:896:-80.6322,-7.52575,0	1/1:46:0,46:0:0:46:1569:-139.283,-13.8474,0	0/1:62:16,46:16:550:46:1594:-124.664,0,-31.1609	1/1:28:0,26:0:0:26:932:-83.7483,-7.82678,0	1/1:67:0,67:0:0:67:2319:-207.272,-20.169,0	1/1:36:0,35:0:0:35:1227:-109.65,-10.5361,0	1/1:34:0,34:0:0:34:1166:-104.137,-10.235,0	0/1:90:37,52:37:1254:52:1805:-134.246,0,-86.0047	1/1:14:0,14:0:0:14:472:-42.7174,-4.21442,0	1/1:24:1,23:1:36:23:796:-68.1647,-3.62645,0	0/1:49:8,41:8:273:41:1439:-114.178,0,-10.1513	1/1:8:0,8:0:0:8:288:-26.222,-2.40824,0	1/1:14:1,13:1:31:13:464:-38.9518,-1.11497,0	1/1:33:0,33:0:0:33:1158:-104.22,-9.93399,0	1/1:32:0,31:0:0:31:1063:-95.4944,-9.33193,0	1/1:65:0,63:0:0:63:2082:-182.859,-18.9649,0	1/1:13:0,13:0:0:13:464:-41.8237,-3.91339,0	1/1:38:0,37:0:0:37:1308:-117.104,-11.1381,0	1/1:44:0,42:0:0:42:1446:-129.475,-12.6433,0	1/1:29:1,28:1:33:28:967:-82.9123,-5.43074,0	1/1:32:0,30:0:0:30:1076:-96.7313,-9.0309,0	1/1:34:0,34:0:0:34:1177:-105.678,-10.235,0	1/1:25:0,25:0:0:25:879:-79.044,-7.52575,0	1/1:32:0,32:0:0:32:1061:-94.8516,-9.63296,0	1/1:30:0,30:0:0:30:1063:-95.7829,-9.0309,0	1/1:54:0,48:0:0:48:1656:-147.261,-14.4494,0	1/1:25:1,23:1:34:23:767:-65.2731,-4.17548,0	1/1:29:0,29:0:0:29:1018:-91.5983,-8.72987,0	1/1:25:2,23:2:71:23:801:-65.3311,-0.783691,0	1/1:43:0,42:0:0:42:1467:-131.179,-12.6433,0	1/1:69:0,66:0:0:66:2291:-204.951,-19.868,0	0/1:41:13,28:13:443:28:973:-74.607,0,-27.8525	1/1:18:0,18:0:0:18:623:-56.3541,-5.41854,0	1/1:34:0,34:0:0:34:1146:-102.073,-10.235,0	1/1:54:0,54:0:0:54:1867:-167.673,-16.2556,0	1/1:49:4,44:4:140:44:1518:-123.337,-1.77668,0	1/1:119:0,117:0:0:117:4098:-367.555,-35.2205,0	1/1:31:0,28:0:0:28:948:-84.5069,-8.42884,0	1/1:22:0,22:0:0:22:761:-68.3619,-6.62266,0	1/1:25:0,25:0:0:25:808:-71.0263,-7.52575,0	1/1:46:0,43:0:0:43:1427:-126.726,-12.9443,0	1/1:14:0,14:0:0:14:469:-42.1067,-4.21442,0	0/1:34:9,25:9:298:25:856:-66.0873,0,-16.907	0/1:38:12,25:12:390:25:852:-65.1581,0,-23.2665	1/1:34:0,30:0:0:30:1009:-90.0195,-9.0309,0	0/1:86:33,53:33:1087:53:1827:-138.239,0,-72.2363	0/1:30:6,24:6:191:24:844:-66.7559,0,-8.47257	1/1:28:0,28:0:0:28:977:-87.7878,-8.42884,0	1/1:69:0,68:0:0:68:2309:-206.591,-20.47,0
chr01	28984561	.	T	A	115088	PASS	AB=0.469231;ABP=27.598;AC=149;AF=0.792553;AN=188;AO=5339;CIGAR=1X;DP=6939;DPB=6939;DPRA=0;EPP=11397.6;EPPR=3358.85;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.986;MQMR=59.9919;NS=94;NUMALT=1;ODDS=3.41856;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=190739;QR=57236;RO=1597;RPL=5321;RPP=11440.7;RPPR=3358.85;RPR=18;RUN=1;SAF=5;SAP=11553.1;SAR=5334;SRF=0;SRP=3470.85;SRR=1597;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:44:0,44:0:0:44:1547:-139.519,-13.2453,0	0/1:51:16,35:16:576:35:1247:-97.1815,0,-36.8225	1/1:100:0,100:0:0:100:3576:-322.048,-30.103,0	1/1:156:0,156:0:0:156:5574:-501.783,-46.9607,0	0/1:41:24,17:24:864:17:612:-43.0712,0,-65.7403	0/1:33:17,16:17:612:16:572:-41.8794,0,-45.4794	0/1:36:9,27:9:320:27:968:-76.6003,0,-18.3053	1/1:126:0,126:0:0:126:4487:-403.999,-37.9298,0	1/1:80:0,80:0:0:80:2864:-257.997,-24.0824,0	1/1:91:0,91:0:0:91:3260:-293.621,-27.3937,0	1/1:68:0,68:0:0:68:2444:-220.215,-20.47,0	1/1:93:0,93:0:0:93:3311:-298.209,-27.9958,0	0/1:45:20,25:20:716:25:900:-67.7747,0,-51.2214	0/1:55:23,32:23:828:32:1152:-87.4335,0,-58.2875	0/1:59:24,35:24:856:35:1245:-94.5928,0,-59.6003	1/1:71:0,71:0:0:71:2535:-228.401,-21.3731,0	1/1:34:0,34:0:0:34:1220:-110.107,-10.235,0	0/1:22:13,9:13:464:9:324:-22.8832,0,-35.4748	0/1:41:16,25:16:576:25:896:-68.6181,0,-39.8328	0/1:87:44,43:44:1561:43:1540:-112.703,0,-114.59	0/1:174:106,68:106:3796:68:2432:-166.756,0,-289.43	0/1:36:19,17:19:684:17:608:-44.2149,0,-51.0532	1/1:65:2,63:2:72:63:2260:-196.826,-12.7302,0	1/1:47:1,46:1:36:46:1643:-144.56,-10.5501,0	1/1:39:0,39:0:0:39:1392:-125.579,-11.7402,0	0/1:174:96,78:96:3440:78:2780:-198.062,0,-257.434	1/1:180:0,179:0:0:179:6385:-574.378,-53.8844,0	1/1:27:0,27:0:0:27:953:-86.0842,-8.12781,0	0/1:200:110,90:110:3952:90:3222:-229.996,0,-295.664	1/1:151:2,149:2:72:149:5326:-472.638,-38.6188,0	1/1:66:0,66:0:0:66:2342:-211.037,-19.868,0	1/1:17:0,17:0:0:17:597:-54.057,-5.11751,0	1/1:26:0,26:0:0:26:928:-83.8383,-7.82678,0	0/1:14:6,8:6:212:8:283:-21.5978,0,-15.2104	1/1:21:0,21:0:0:21:748:-67.6453,-6.32163,0	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	0/1:135:66,69:66:2368:69:2472:-182.095,0,-172.739	1/1:50:0,50:0:0:50:1767:-159.311,-15.0515,0	0/1:58:26,32:26:936:32:1135:-84.9983,0,-67.0997	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/1:88:47,41:47:1684:41:1464:-105.565,0,-125.356	1/1:42:0,42:0:0:42:1492:-134.575,-12.6433,0	1/1:122:0,122:0:0:122:4365:-393.023,-36.7257,0	1/1:81:0,81:0:0:81:2904:-261.595,-24.3834,0	1/1:46:0,46:0:0:46:1648:-148.609,-13.8474,0	1/1:82:0,82:0:0:82:2942:-265.009,-24.6845,0	1/1:81:0,81:0:0:81:2899:-261.145,-24.3834,0	0/1:141:79,62:79:2829:62:2213:-156.989,0,-212.402	0/1:86:50,36:50:1781:36:1281:-89.7027,0,-134.682	0/1:91:59,32:59:2116:32:1148:-76.2361,0,-163.315	0/1:80:45,35:45:1620:35:1248:-88.5425,0,-122.008	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:82:0,82:0:0:82:2952:-265.913,-24.6845,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:106:0,106:0:0:106:3796:-341.838,-31.9092,0	1/1:19:0,19:0:0:19:671:-60.7158,-5.71957,0	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	1/1:74:0,74:0:0:74:2630:-236.947,-22.2762,0	1/1:70:0,69:0:0:69:2463:-221.563,-20.7711,0	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	1/1:146:2,144:2:72:144:5144:-456.264,-37.1137,0	0/1:105:62,43:62:2213:43:1508:-104.401,0,-167.825	1/1:75:0,75:0:0:75:2676:-241.086,-22.5773,0	1/1:49:0,49:0:0:49:1760:-158.684,-14.7505,0	1/1:157:0,157:0:0:157:5610:-505.022,-47.2617,0	0/1:101:67,34:67:2400:34:1224:-80.063,0,-185.853	1/1:81:0,81:0:0:81:2907:-261.864,-24.3834,0	1/1:40:0,40:0:0:40:1423:-128.367,-12.0412,0	1/1:38:0,38:0:0:38:1341:-120.989,-11.4391,0	1/1:48:0,48:0:0:48:1700:-153.286,-14.4494,0	0/1:86:49,37:49:1760:37:1328:-93.9337,0,-132.795	0/1:83:49,34:49:1764:34:1208:-84.0406,0,-134.058	1/1:109:0,109:0:0:109:3903:-351.463,-32.8123,0	1/1:184:0,184:0:0:184:6601:-594.166,-55.3895,0	0/1:59:32,27:32:1148:27:968:-69.6766,0,-85.8691	1/1:124:3,121:3:108:121:4296:-376.735,-27.2526,0	1/1:32:0,32:0:0:32:1144:-103.27,-9.63296,0	0/1:105:57,48:57:2048:48:1698:-121.496,0,-152.983	0/1:71:34,37:34:1216:37:1328:-98.4491,0,-88.3734	0/1:164:80,84:80:2864:84:3016:-222.301,0,-208.628	0/1:57:30,27:30:1076:27:959:-69.4667,0,-79.9941	0/1:50:22,28:22:792:28:1000:-75.2639,0,-56.5542	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	0/1:86:50,36:50:1792:36:1292:-90.6952,0,-135.674	0/1:27:15,12:15:536:12:419:-29.4829,0,-40.447	1/1:81:0,81:0:0:81:2904:-261.595,-24.3834,0	1/1:71:0,71:0:0:71:2535:-228.401,-21.3731,0	0/1:48:14,34:14:500:34:1220:-95.6574,0,-30.8867	0/1:105:56,49:56:2000:49:1747:-125.905,0,-148.666	0/1:79:49,30:49:1760:30:1080:-73.7319,0,-134.903	1/1:108:0,108:0:0:108:3850:-346.696,-32.5112,0	1/1:99:0,98:0:0:98:3507:-315.48,-29.5009,0
chr01	30395005	.	CAGCG	CAGCC,TAGCC	408258	PASS	AB=0.514401,0.480847;ABP=15.5188,25.1366;AC=149,39;AF=0.792553,0.207447;AN=188;AO=11999,3367;CIGAR=4M1X,1X3M1X;DP=15476;DPB=15477.4;DPRA=0,1.26589;EPP=26049.8,7314.36;EPPR=5.18177;GTI=0;LEN=1,5;MEANALT=2.51064,2.93617;MQM=59.6914,40.0906;MQMR=60;NS=94;NUMALT=2;ODDS=5.83069;PAIRED=0,0;PAIREDR=0;PAO=0.5,6.5;PQA=16,228;PQR=0;PRO=0;QA=424248,117167;QR=25;RO=1;RPL=4958,1672;RPP=788.224,3.35147;RPPR=5.18177;RPR=7041,1695;RUN=1,1;SAF=4959,1672;SAP=786.717,3.35147;SAR=7040,1695;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:99:0,98,0:0:0:98,0:3485,0:-313.509,-29.5009,0,-313.509,-29.5009,-313.509	1/2:225:0,112,113:0:0:112,113:3937,3958:-611.292,-290.858,-257.143,-320.769,0,-286.753	1/1:276:0,272,0:0:0:272,0:9564,0:-859.549,-81.8802,0,-859.549,-81.8802,-859.549	1/1:328:0,323,1:0:0:323,1:11395,31:-1024.41,-97.2327,0,-1021.92,-94.7432,-1021.62	1/2:67:0,25,42:0:0:25,42:896,1451:-180.487,-107.397,-99.871,-73.4331,0,-60.7898	1/2:72:0,37,35:0:0:37,35:1287,1208:-195.523,-90.8676,-79.7295,-104.989,0,-94.4531	1/2:214:0,127,86:0:0:127,86:4511,3023:-592.032,-224.79,-186.559,-367.327,0,-341.438	1/1:229:0,229,0:0:0:229,0:8058,0:-725.092,-68.9359,0,-725.092,-68.9359,-725.092	1/1:245:0,244,0:0:0:244,0:8718,0:-783.607,-73.4513,0,-783.607,-73.4513,-783.607	1/1:203:1,200,0:1:25:200,0:7078,0:-634.37,-58.2621,0,-634.671,-60.206,-636.619	1/1:133:0,131,0:0:0:131,0:4652,0:-418.501,-39.4349,0,-418.501,-39.4349,-418.501	1/1:173:0,173,0:0:0:173,0:6011,0:-541.1,-52.0782,0,-541.1,-52.0782,-541.1	1/2:137:0,75,61:0:0:75,61:2614,2139:-362.049,-149.487,-126.91,-212.528,0,-194.165	1/2:105:0,58,46:0:0:58,46:2025,1596:-279.686,-114.987,-97.5272,-164.746,0,-150.898	1/2:130:0,70,60:0:0:70,60:2504,2100:-355.848,-151.648,-130.576,-204.534,0,-186.472	1/1:114:0,113,0:0:0:113,0:3974,0:-357.389,-34.0164,0,-357.389,-34.0164,-357.389	1/1:97:0,96,0:0:0:96,0:3389,0:-304.867,-28.8989,0,-304.867,-28.8989,-304.867	1/2:89:0,49,40:0:0:49,40:1727,1393:-243.776,-103.146,-88.3959,-140.964,0,-128.922	1/2:62:0,31,31:0:0:31,31:1095,1067:-164.259,-75.0776,-65.7456,-89.5086,0,-80.1767	1/2:296:0,134,158:0:0:134,158:4783,5518:-803.827,-413.91,-373.572,-389.978,0,-342.415	1/2:264:0,133,131:0:0:133,131:4684,4552:-720.804,-339.553,-299.516,-381.588,0,-342.153	1/2:164:0,57,107:0:0:57,107:2012,3685:-441.311,-277.461,-260.302,-163.836,0,-131.625	1/1:199:0,197,1:0:0:197,1:6969,36:-626.89,-59.3029,0,-623.966,-56.38,-623.665	1/1:183:0,164,17:0:0:164,17:5852,594:-526.395,-49.3689,0,-482.601,-5.5036,-477.483	1/1:114:0,114,0:0:0:114,0:4036,0:-363.301,-34.3174,0,-363.301,-34.3174,-363.301	1/2:446:0,233,209:0:0:233,209:8291,7282:-1228.78,-554.237,-484.097,-674.576,0,-611.66	1/1:430:0,422,0:0:0:422,0:15022,0:-1351.24,-127.035,0,-1351.24,-127.035,-1351.24	1/1:63:0,62,0:0:0:62,0:2190,0:-196.758,-18.6639,0,-196.758,-18.6639,-196.758	1/2:391:0,197,193:0:0:197,193:7003,6762:-1082.71,-512.099,-452.796,-570.598,0,-512.5	1/1:198:0,196,1:0:0:196,1:6927,30:-622.863,-59.0019,0,-620.835,-56.9635,-620.534	1/1:144:0,142,0:0:0:142,0:5012,0:-450.87,-42.7463,0,-450.87,-42.7463,-450.87	1/1:14:0,14,0:0:0:14,0:504,0:-45.6981,-4.21442,0,-45.6981,-4.21442,-45.6981	1/1:16:0,16,0:0:0:16,0:567,0:-51.3607,-4.81648,0,-51.3607,-4.81648,-51.3607	1/2:8:0,3,5:0:0:3,5:108,173:-20.5456,-11.7061,-10.8031,-9.17208,0,-7.66693	1/1:11:0,11,0:0:0:11,0:392,0:-35.6201,-3.31133,0,-35.6201,-3.31133,-35.6201	1/1:16:0,15,0:0:0:15,0:532,0:-47.8528,-4.51545,0,-47.8528,-4.51545,-47.8528	1/2:354:0,191,163:0:0:191,163:6743,5663:-978.219,-429.352,-371.855,-549.205,0,-500.137	1/1:205:0,200,0:0:0:200,0:7102,0:-638.543,-60.206,0,-638.543,-60.206,-638.543	1/2:103:0,54,48:0:0:54,48:1899,1662:-272.828,-118.224,-101.968,-154.729,0,-140.28	1/2:4:0,3,1:0:0:3,1:108,31:-11.3214,-2.44526,-1.54217,-9.17208,0,-8.87105	1/2:211:0,122,89:0:0:122,89:4253,3098:-571.999,-226.132,-189.406,-346.196,0,-319.405	1/1:71:0,71,0:0:0:71,0:2505,0:-225.579,-21.3731,0,-225.579,-21.3731,-225.579	1/1:224:0,220,1:0:0:220,1:7790,33:-700.737,-66.2266,0,-698.092,-63.5877,-697.791	1/1:156:0,155,0:0:0:155,0:5452,0:-490.27,-46.6597,0,-490.27,-46.6597,-490.27	1/1:121:0,118,0:0:0:118,0:4156,0:-373.809,-35.5215,0,-373.809,-35.5215,-373.809	1/1:186:0,184,0:0:0:184,0:6560,0:-590.13,-55.3895,0,-590.13,-55.3895,-590.13	1/1:209:0,203,0:0:0:203,0:7109,0:-639.132,-61.1091,0,-639.132,-61.1091,-639.132	1/2:231:0,136,95:0:0:136,95:4836,3267:-636.639,-242.681,-201.741,-393.934,0,-365.336	1/2:187:0,98,89:0:0:98,89:3430,3081:-511.67,-232.641,-203.14,-279.365,0,-252.574	1/2:241:0,124,115:0:0:124,115:4351,4017:-649.619,-295.544,-258.216,-354.098,0,-319.48	1/2:240:0,125,114:0:0:125,114:4395,3981:-654.805,-297.047,-259.418,-357.815,0,-323.497	1/1:14:0,14,0:0:0:14,0:495,0:-44.883,-4.21442,0,-44.883,-4.21442,-44.883	1/1:257:0,254,0:0:0:254,0:9004,0:-809.982,-76.4616,0,-809.982,-76.4616,-809.982	1/1:168:0,168,0:0:0:168,0:5949,0:-535.376,-50.573,0,-535.376,-50.573,-535.376	1/1:32:0,32,0:0:0:32,0:1148,0:-103.626,-9.63296,0,-103.626,-9.63296,-103.626	1/1:22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chr01	30395018	.	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chr01	30642947	.	A	G	27842.8	PASS	AB=0.473056;ABP=25.7118;AC=40;AF=0.212766;AN=188;AO=1717;CIGAR=1X;DP=7836;DPB=7836;DPRA=1.20019;EPP=3731.43;EPPR=13288.1;GTI=1;LEN=1;MEANALT=1.02083;MQM=59.9301;MQMR=59.9667;NS=94;NUMALT=1;ODDS=3.61549;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61104;QR=219135;RO=6118;RPL=1717;RPP=3731.43;RPPR=13279.4;RPR=0;RUN=1;SAF=1717;SAP=3731.43;SAR=0;SRF=6117;SRP=13279.4;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:66:32,34:32:1148:34:1200:-88.4376,0,-83.7619	0/0:112:112,0:112:4024:0:0:0,-33.7154,-362.347	0/0:175:174,1:174:6224:1:36:0,-49.082,-556.658	0/1:19:14,5:14:504:5:180:-10.8325,0,-39.9785	0/1:37:15,22:15:536:22:792:-60.4676,0,-36.4101	0/1:85:51,34:51:1828:34:1220:-84.5193,0,-139.213	0/0:97:97,0:97:3480:0:0:0,-29.1999,-313.411	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/0:104:104,0:104:3720:0:0:0,-31.3071,-334.775	0/0:84:84,0:84:2984:0:0:0,-25.2865,-268.791	0/0:90:90,0:90:3219:0:0:0,-27.0927,-289.932	0/1:80:48,32:48:1704:32:1139:-78.736,0,-129.564	0/1:97:46,51:46:1648:51:1806:-133.62,0,-119.409	0/1:56:33,23:33:1180:23:824:-57.621,0,-89.6504	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.901	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/1:42:23,19:23:828:19:680:-48.8859,0,-62.2009	0/1:17:9,8:9:324:8:288:-21.1499,0,-24.3883	0/1:119:42,77:42:1512:77:2741:-211.11,0,-100.552	0/1:124:69,54:69:2476:54:1931:-136.679,0,-185.707	0/1:51:17,34:17:612:34:1199:-92.8619,0,-40.0609	0/0:105:104,1:104:3727:1:36:0,-28.0099,-332.032	0/1:51:46,5:46:1648:5:180:-1.19954,0,-133.256	0/0:19:18,1:18:639:1:36:0,-2.12129,-54.24	0/1:209:109,100:109:3901:100:3556:-256.843,0,-288.367	0/0:150:150,0:150:5357:0:0:0,-45.1545,-482.262	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:201:112,89:112:4011:89:3176:-225.557,0,-300.671	0/0:145:143,2:143:5128:2:72:0,-36.8126,-454.824	0/0:125:125,0:125:4492:0:0:0,-37.6287,-404.447	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:191:99,92:99:3536:92:3292:-239.003,0,-260.953	0/1:124:68,56:68:2416:56:1966:-139.875,0,-180.36	0/1:57:30,27:30:1080:27:957:-69.2868,0,-80.3187	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:124:67,57:67:2367:57:2031:-145.734,0,-175.956	0/0:38:38,0:38:1353:0:0:0,-11.4391,-122.068	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.684	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/0:68:68,0:68:2436:0:0:0,-20.47,-219.225	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.763	0/0:51:48,3:48:1724:3:108:0,-5.27736,-145.37	0/1:162:78,84:78:2796:84:2975:-219.215,0,-203.113	0/1:77:50,27:50:1800:27:949:-62.5443,0,-139.103	0/1:152:88,64:88:3160:64:2276:-159.29,0,-238.868	0/1:86:62,24:62:2228:24:856:-51.4725,0,-174.895	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:129:129,0:129:4632:0:0:0,-38.8329,-417.041	0/0:64:64,0:64:2285:0:0:0,-19.2659,-205.91	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:169:169,0:169:6052:0:0:0,-50.8741,-544.709	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:25:16,9:16:564:9:324:-21.9801,0,-43.5646	0/0:116:116,0:116:4155:0:0:0,-34.9195,-374.132	0/0:123:123,0:123:4408:0:0:0,-37.0267,-396.806	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:296:296,0:296:10608:0:0:0,-89.1049,-954.627	0/1:128:69,59:69:2459:59:2107:-151.367,0,-183.032	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.976	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/0:163:161,2:161:5763:2:72:0,-42.2312,-511.948	0/1:122:43,79:43:1540:79:2828:-218.031,0,-102.167	0/0:56:53,3:53:1900:3:104:0,-7.15487,-161.575	0/0:51:51,0:51:1836:0:0:0,-15.3525,-165.521	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.993	0/0:43:42,1:42:1500:1:36:0,-9.34601,-131.696	0/1:67:40,27:40:1415:27:960:-66.5473,0,-107.478	0/1:79:48,31:48:1728:31:1106:-76.0696,0,-132.024	0/0:151:151,0:151:5424:0:0:0,-45.4555,-488.287	0/0:203:203,0:203:7258:0:0:0,-61.1091,-653.27	0/1:17:5,12:5:180:12:432:-34.1037,0,-11.4346	0/0:98:98,0:98:3505:0:0:0,-29.5009,-315.659	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.4319	0/1:105:45,60:45:1620:60:2129:-160.269,0,-114.482	0/1:47:25,22:25:900:22:788:-57.0964,0,-67.1726	0/1:162:101,61:101:3632:61:2179:-147.609,0,-278.317	0/1:66:38,28:38:1364:28:988:-69.3654,0,-103.193	0/1:68:37,31:37:1313:31:1116:-80.2532,0,-97.9997	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/1:130:67,63:67:2399:63:2243:-162.999,0,-177.032	0/1:22:10,12:10:360:12:420:-31.5114,0,-26.1216	0/0:95:95,0:95:3420:0:0:0,-28.5978,-308.012	0/0:75:75,0:75:2700:0:0:0,-22.5772,-243.243	0/1:78:37,41:37:1328:41:1468:-108.936,0,-96.3419	0/1:178:80,98:80:2855:98:3460:-258.028,0,-203.604	0/1:68:23,45:23:811:45:1590:-122.83,0,-52.8399	0/0:210:210,0:210:7518:0:0:0,-63.2163,-676.658	0/0:77:77,0:77:2749:0:0:0,-23.1793,-247.651
chr01	30645467	.	T	A	349499	PASS	AB=0.485486;ABP=20.1559;AC=148;AF=0.787234;AN=188;AO=13108;CIGAR=1X;DP=17963;DPB=17963;DPRA=0;EPP=183.569;EPPR=39.3844;GTI=5;LEN=1;MEANALT=1.06383;MQM=59.9777;MQMR=59.9928;NS=94;NUMALT=1;ODDS=0.46487;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=463014;QR=172963;RO=4849;RPL=12993;RPP=27476.6;RPPR=10222.1;RPR=115;RUN=1;SAF=5917;SAP=271.889;SAR=7191;SRF=2246;SRP=60.0843;SRR=2603;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:87:0,87:0:0:87:3081:-277.52,-26.1896,0	0/1:262:137,125:137:4886:125:4404:-317.665,0,-361.023	1/1:343:1,342:1:32:342:12108:-1086.38,-100.054,0	1/1:325:0,325:0:0:325:11490:-1033.83,-97.8348,0	0/1:171:82,89:82:2896:89:3175:-234.498,0,-209.397	0/1:153:85,68:85:3031:68:2371:-167.59,0,-226.963	0/1:310:143,167:143:5115:167:5862:-434.381,0,-367.173	1/1:288:1,287:1:36:287:10064:-902.033,-83.0984,0	1/1:190:0,190:0:0:190:6741:-606.771,-57.1957,0	1/1:110:1,109:1:32:109:3837:-342.331,-29.914,0	1/1:173:0,173:0:0:173:6148:-553.42,-52.0782,0	1/1:204:1,203:1:36:203:7089:-634.49,-57.8118,0	0/1:173:102,71:102:3663:71:2544:-177.133,0,-277.794	0/1:228:114,114:114:4088:114:4012:-292.638,0,-299.47	0/1:137:76,61:76:2713:61:2164:-153.786,0,-203.171	1/1:139:0,139:0:0:139:4936:-444.392,-41.8432,0	1/1:203:0,203:0:0:203:7186:-646.805,-61.1091,0	0/1:164:83,81:83:2971:81:2871:-209.251,0,-218.253	0/1:93:45,48:45:1620:48:1699:-125.2,0,-118.094	0/1:434:217,217:217:7744:217:7709:-563.204,0,-566.346	0/1:342:185,157:185:6542:157:5495:-391.735,0,-485.911	0/1:103:69,34:69:2468:34:1196:-76.9365,0,-191.368	1/1:109:0,109:0:0:109:3866:-348.136,-32.8123,0	1/1:225:8,217:8:284:217:7688:-665.054,-41.8284,0	1/1:125:0,125:0:0:125:4347:-391.412,-37.6288,0	0/1:505:255,250:255:9067:250:8778:-638.006,0,-663.987	1/1:314:0,314:0:0:314:11056:-994.953,-94.5234,0	1/1:97:0,97:0:0:97:3442:-309.994,-29.1999,0	0/1:502:239,263:239:8556:263:9344:-689.813,0,-618.918	1/1:139:0,139:0:0:139:4880:-439.361,-41.8432,0	1/1:143:0,143:0:0:143:5007:-450.787,-43.0473,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:41:0,41:0:0:41:1457:-131.425,-12.3422,0	0/1:16:12,4:12:428:4:144:-8.49714,0,-34.0423	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	0/1:442:202,239:202:7214:239:8479:-630.008,0,-516.19	0/1:301:151,150:151:5408:150:5316:-387.968,0,-396.212	0/1:187:87,100:87:3128:100:3517:-260.449,0,-225.453	0/1:10:4,6:4:144:6:208:-16.0488,0,-10.3033	0/1:336:165,171:165:5883:171:6038:-442.379,0,-428.434	1/1:92:0,92:0:0:92:3272:-294.702,-27.6948,0	1/1:222:0,221:0:0:221:7816:-703.149,-66.5276,0	1/1:182:0,182:0:0:182:6439:-579.518,-54.7875,0	1/1:180:0,180:0:0:180:6329:-569.71,-54.1854,0	1/1:169:0,169:0:0:169:6003:-540.379,-50.8741,0	1/1:249:1,248:1:36:248:8756:-784.445,-71.3582,0	0/1:347:178,169:178:6315:169:5974:-433.315,0,-463.986	0/1:176:85,91:85:3039:91:3247:-239.47,0,-220.758	0/1:241:118,123:118:4224:123:4326:-316.971,0,-307.792	0/1:312:171,141:171:6098:141:5018:-357.849,0,-455.002	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:244:2,242:2:72:242:8566:-764.111,-66.6146,0	1/1:72:0,72:0:0:72:2548:-229.572,-21.6742,0	1/1:29:0,29:0:0:29:1032:-93.1935,-8.72987,0	1/1:209:1,208:1:36:208:7317:-654.994,-59.317,0	1/1:83:0,83:0:0:83:2972:-267.713,-24.9855,0	1/1:22:0,22:0:0:22:783:-70.7929,-6.62266,0	0/1:39:22,17:22:779:17:596:-42.227,0,-58.6919	1/1:149:0,149:0:0:149:5272:-474.619,-44.8535,0	1/1:255:4,250:4:140:250:8833:-782.002,-63.803,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:233:3,230:3:108:230:8164:-724.702,-60.0648,0	0/1:421:178,243:178:6375:243:8637:-650.598,0,-447.105	1/1:168:1,167:1:32:167:5897:-527.647,-47.3737,0	1/1:163:0,163:0:0:163:5729:-515.733,-49.0679,0	1/1:281:1,280:1:36:280:9898:-887.046,-80.9912,0	0/1:197:127,70:127:4536:70:2445:-161.003,0,-349.103	1/1:100:0,100:0:0:100:3560:-320.605,-30.103,0	1/1:210:0,210:0:0:210:7341:-660.76,-63.2163,0	1/1:222:0,222:0:0:222:7860:-707.435,-66.8287,0	1/1:36:0,36:0:0:36:1262:-113.881,-10.8371,0	0/1:175:92,83:92:3285:83:2936:-211.795,0,-243.188	0/1:131:73,58:73:2620:58:2043:-144.706,0,-196.612	1/1:215:0,215:0:0:215:7513:-676.231,-64.7215,0	1/1:280:0,280:0:0:280:9905:-891.398,-84.2884,0	0/1:305:174,131:174:6210:131:4640:-325.952,0,-467.184	1/1:156:6,150:6:216:150:5287:-456.185,-27.1702,0	1/1:31:0,31:0:0:31:1099:-99.2195,-9.33193,0	0/1:259:143,116:143:5094:116:4091:-290.413,0,-380.636	0/1:217:111,106:111:3960:106:3713:-269.051,0,-291.266	0/1:441:216,224:216:7673:224:7912:-579.292,0,-557.791	0/1:224:124,100:124:4407:100:3540:-251.379,0,-329.372	0/1:128:80,48:80:2832:48:1685:-113.402,0,-216.586	1/1:191:0,191:0:0:191:6747:-607.309,-57.4967,0	0/1:281:119,161:119:4254:161:5682:-426.855,0,-298.39	0/1:95:49,46:49:1733:46:1617:-117.219,0,-127.655	1/1:163:0,163:0:0:163:5790:-521.215,-49.0679,0	1/1:160:0,160:0:0:160:5663:-509.797,-48.1648,0	0/1:159:82,77:82:2914:77:2727:-197.809,0,-214.629	0/1:202:111,91:111:3967:91:3224:-229.574,0,-296.413	0/1:151:112,39:112:3987:39:1392:-80.1235,0,-313.563	1/1:214:0,214:0:0:214:7533:-678.026,-64.4204,0	1/1:285:0,284:0:0:284:10026:-901.911,-85.4925,0
chr01	30761811	.	C	T	156895	PASS	AB=0.521554;ABP=16.3028;AC=148;AF=0.787234;AN=188;AO=5880;CIGAR=1X;DP=7476;DPB=7476;DPRA=0;EPP=1539.88;EPPR=319.5;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.6636;MQMR=59.9228;NS=94;NUMALT=1;ODDS=2.25599;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=209215;QR=56511;RO=1594;RPL=5868;RPP=12667.3;RPPR=3446.99;RPR=12;RUN=1;SAF=3948;SAP=1503.93;SAR=1932;SRF=1036;SRP=314.269;SRR=558;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:31:0,31:0:0:31:1112:-100.391,-9.33193,0	0/1:28:14,14:14:487:14:504:-37.2693,0,-35.7294	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	1/1:65:0,65:0:0:65:2292:-206.495,-19.567,0	0/1:34:26,8:26:928:8:288:-16.0324,0,-73.6032	0/1:36:16,20:16:572:20:716:-53.9306,0,-40.9763	0/1:50:22,28:22:774:28:1004:-75.622,0,-54.9287	1/1:42:0,42:0:0:42:1482:-133.662,-12.6433,0	1/1:53:0,53:0:0:53:1894:-170.738,-15.9546,0	1/1:37:0,37:0:0:37:1328:-119.794,-11.1381,0	1/1:280:1,279:1:27:279:9957:-893.236,-81.5886,0	1/1:110:0,110:0:0:110:3907:-351.75,-33.1133,0	0/1:89:37,52:37:1314:52:1847:-139.658,0,-91.7677	0/1:79:32,47:32:1152:47:1688:-128.421,0,-80.2079	0/1:76:30,46:30:1067:46:1638:-124.826,0,-73.4629	1/1:85:0,85:0:0:85:3010:-271.116,-25.5876,0	1/1:62:0,62:0:0:62:2216:-199.704,-18.6639,0	0/1:54:24,30:24:864:30:1076:-80.7552,0,-61.8269	0/1:110:52,58:52:1844:58:2080:-154.343,0,-133.123	0/1:38:15,23:15:540:23:828:-63.405,0,-37.4974	0/1:46:22,24:22:784:24:847:-62.6879,0,-57.0365	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:34:0,34:0:0:34:1182:-106.309,-10.235,0	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	0/1:10:1,9:1:36:9:320:-26.1321,0,-0.587975	0/1:85:36,49:36:1264:49:1745:-131.728,0,-88.4722	1/1:53:0,53:0:0:53:1896:-170.903,-15.9546,0	1/1:43:0,43:0:0:43:1528:-137.766,-12.9443,0	0/1:58:21,37:21:752:37:1316:-101.281,0,-50.5015	1/1:42:0,42:0:0:42:1504:-135.655,-12.6433,0	1/1:48:0,48:0:0:48:1712:-154.204,-14.4494,0	1/1:139:0,139:0:0:139:4962:-446.16,-41.8432,0	1/1:96:0,96:0:0:96:3408:-306.92,-28.8989,0	0/1:104:68,35:68:2384:35:1256:-82.1182,0,-183.592	1/1:171:1,170:1:36:170:6039:-539.904,-47.8779,0	1/1:215:1,214:1:36:214:7602:-680.484,-61.1232,0	0/1:169:79,90:79:2798:90:3204:-237.708,0,-201.187	0/1:28:14,14:14:500:14:500:-36.9073,0,-36.9073	0/1:248:116,132:116:4070:132:4675:-346.18,0,-291.829	0/1:89:41,48:41:1472:48:1728:-129.001,0,-105.555	0/1:38:12,26:12:420:26:932:-72.7597,0,-26.6949	1/1:150:0,150:0:0:150:5343:-480.941,-45.1545,0	1/1:41:1,40:1:36:40:1428:-125.215,-8.74396,0	1/1:66:1,65:1:36:65:2305:-204.093,-16.2697,0	1/1:64:0,64:0:0:64:2262:-203.842,-19.2659,0	1/1:23:0,23:0:0:23:824:-74.4815,-6.92369,0	1/1:17:1,16:1:36:16:559:-47.0383,-1.51924,0	0/1:77:38,39:38:1351:39:1387:-101.946,0,-98.7103	0/1:31:16,15:16:576:15:531:-38.7313,0,-42.8431	0/1:41:24,17:24:856:17:612:-43.0712,0,-65.0189	0/1:35:22,13:22:792:13:464:-31.5615,0,-61.0696	1/1:145:1,144:1:36:144:5156:-460.485,-40.0511,0	1/1:24:0,24:0:0:24:826:-74.6435,-7.22472,0	1/1:26:0,26:0:0:26:924:-83.4661,-7.82678,0	1/1:55:0,55:0:0:55:1955:-176.207,-16.5567,0	1/1:37:0,37:0:0:37:1290:-116.397,-11.1381,0	1/1:21:0,21:0:0:21:739:-66.8324,-6.32163,0	1/1:142:0,142:0:0:142:5056:-455.167,-42.7463,0	0/1:81:38,43:38:1364:43:1535:-114.056,0,-98.6773	1/1:36:0,36:0:0:36:1288:-116.219,-10.8371,0	1/1:90:0,90:0:0:90:3222:-290.108,-27.0927,0	1/1:102:1,101:1:36:101:3617:-322.1,-27.1068,0	1/1:28:0,28:0:0:28:966:-87.2472,-8.42884,0	0/1:48:27,21:27:960:21:756:-53.887,0,-72.2668	1/1:15:0,15:0:0:15:537:-48.6653,-4.51545,0	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	1/1:32:1,31:1:36:31:1104:-96.0439,-6.03469,0	0/1:27:19,8:19:680:8:288:-18.1396,0,-53.4014	1/1:294:5,289:5:176:289:10296:-910.202,-72.3178,0	1/1:20:0,20:0:0:20:693:-62.6568,-6.0206,0	1/1:98:0,98:0:0:98:3493:-314.479,-29.5009,0	1/1:114:2,112:2:72:112:3982:-351.528,-27.4807,0	0/1:24:13,11:13:468:11:392:-28.3953,0,-35.2349	0/1:38:23,15:23:819:15:532:-36.7739,0,-62.5915	1/1:89:1,88:1:36:88:3129:-278.236,-23.1934,0	1/1:58:0,58:0:0:58:2050:-184.771,-17.4597,0	0/1:30:15,15:15:540:15:536:-39.5439,0,-39.9056	1/1:49:3,46:3:104:46:1623:-136.651,-5.04766,0	1/1:192:0,192:0:0:192:6864:-617.131,-57.7978,0	0/1:50:25,25:25:884:25:892:-65.5482,0,-64.8269	0/1:37:16,21:16:563:21:743:-56.047,0,-39.8611	0/1:66:24,42:24:860:42:1496:-115.067,0,-57.8515	0/1:92:39,53:39:1381:53:1863:-140.251,0,-96.5214	0/1:83:45,38:45:1579:38:1368:-98.4353,0,-117.411	1/1:99:0,99:0:0:99:3532:-318.077,-29.802,0	0/1:140:66,74:66:2355:74:2614:-193.305,0,-170.064	0/1:30:14,16:14:491:16:564:-42.0594,0,-35.4902	1/1:97:0,97:0:0:97:3442:-309.965,-29.1999,0	1/1:83:0,83:0:0:83:2944:-265.071,-24.9855,0	0/1:346:161,184:161:5667:184:6520:-482.609,0,-406.024	0/1:477:239,238:239:8468:238:8457:-617.48,0,-618.535	0/1:72:32,40:32:1132:40:1428:-107.141,0,-80.5144	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:145:0,145:0:0:145:5129:-461.735,-43.6494,0
chr01	31026040	.	T	C	131245	PASS	AB=0.48673;ABP=9.11913;AC=147;AF=0.781915;AN=188;AO=6159;CIGAR=1X;DP=8219;DPB=8219;DPRA=0;EPP=13083.4;EPPR=4372.52;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9753;MQMR=59.9771;NS=94;NUMALT=1;ODDS=0.18263;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=219799;QR=73712;RO=2056;RPL=6125;RPP=13083.4;RPPR=4372.52;RPR=34;RUN=1;SAF=0;SAP=13377.1;SAR=6159;SRF=0;SRP=4467.56;SRR=2056;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	0/1:100:53,47:53:1904:47:1667:-120.214,0,-141.535	1/1:193:1,192:1:36:192:6859:-613.782,-54.5005,0	1/1:192:0,192:0:0:192:6870:-618.099,-57.7978,0	0/1:67:43,23:43:1536:23:828:-54.6163,0,-118.305	0/1:75:46,29:46:1644:29:1039:-71.2471,0,-125.671	0/1:101:42,59:42:1504:59:2079:-156.974,0,-105.251	1/1:108:0,108:0:0:108:3838:-345.618,-32.5112,0	1/1:68:0,68:0:0:68:2427:-218.685,-20.47,0	1/1:108:0,108:0:0:108:3838:-345.617,-32.5112,0	1/1:42:0,42:0:0:42:1474:-132.95,-12.6433,0	1/1:52:0,52:0:0:52:1860:-167.68,-15.6536,0	0/1:48:19,29:19:684:29:1040:-79.4649,0,-47.4409	0/1:63:30,33:30:1080:33:1184:-87.9034,0,-78.5438	0/1:56:27,29:27:968:29:1032:-76.3358,0,-70.5797	1/1:51:0,51:0:0:51:1819:-163.991,-15.3525,0	1/1:78:0,78:0:0:78:2764:-249.001,-23.4803,0	0/1:55:34,20:34:1224:20:705:-47.1577,0,-93.8516	0/1:29:15,14:15:540:14:504:-36.9682,0,-40.2067	0/1:150:81,69:81:2900:69:2466:-177.04,0,-216.081	0/1:111:50,61:50:1792:61:2175:-162.602,0,-128.148	0/1:61:48,13:48:1720:13:460:-23.3725,0,-135.271	1/1:79:0,79:0:0:79:2816:-253.68,-23.7814,0	0/1:80:12,68:12:424:68:2440:-195.773,0,-14.414	1/1:59:0,59:0:0:59:2078:-187.287,-17.7608,0	0/1:249:116,133:116:4153:133:4726:-350.544,0,-298.995	1/1:214:0,214:0:0:214:7659:-689.344,-64.4204,0	1/1:17:0,17:0:0:17:595:-53.8767,-5.11751,0	0/1:158:72,86:72:2576:86:3083:-230.134,0,-184.527	1/1:138:2,136:2:72:136:4872:-431.795,-34.7054,0	1/1:91:0,91:0:0:91:3242:-292.001,-27.3937,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	0/1:151:65,86:65:2332:86:3057:-229.903,0,-164.684	0/1:210:109,101:109:3912:101:3599:-260.9,0,-289.056	0/1:54:34,20:34:1224:20:671:-44.4089,0,-94.2114	0/1:10:6,4:6:212:4:144:-10.3033,0,-16.4145	0/1:124:79,45:79:2828:45:1603:-107.232,0,-217.431	1/1:48:0,48:0:0:48:1719:-154.995,-14.4494,0	1/1:142:0,142:0:0:142:5066:-456.085,-42.7463,0	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0	1/1:42:0,42:0:0:42:1496:-134.933,-12.6433,0	1/1:87:0,87:0:0:87:3107:-279.857,-26.1896,0	1/1:100:0,100:0:0:100:3560:-320.608,-30.103,0	0/1:146:74,72:74:2664:72:2571:-187.689,0,-196.055	0/1:76:37,39:37:1324:39:1390:-102.519,0,-96.5838	0/1:129:69,60:69:2476:60:2139:-153.944,0,-184.26	0/1:155:83,72:83:2972:72:2576:-185.43,0,-221.053	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	1/1:171:0,171:0:0:171:6115:-550.44,-51.4761,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	1/1:159:0,159:0:0:159:5635:-507.259,-47.8638,0	1/1:50:0,50:0:0:50:1792:-161.562,-15.0515,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:11:5,6:5:180:6:212:-16.1135,0,-13.2407	1/1:66:0,66:0:0:66:2359:-212.568,-19.868,0	1/1:120:2,118:2:72:118:4210:-372.244,-29.2869,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:191:2,189:2:72:189:6768:-602.356,-50.66,0	0/1:203:97,106:97:3484:106:3796:-280.729,0,-252.661	1/1:55:0,55:0:0:55:1954:-176.134,-16.5567,0	1/1:112:0,112:0:0:112:4000:-360.191,-33.7154,0	1/1:191:1,190:1:36:190:6774:-606.134,-53.8985,0	0/1:159:108,51:108:3854:51:1813:-115.479,0,-299.189	0/1:26:3,23:3:108:23:824:-66.6565,0,-2.24839	1/1:108:0,108:0:0:108:3863:-347.864,-32.5112,0	1/1:69:0,69:0:0:69:2476:-223.093,-20.7711,0	1/1:30:0,30:0:0:30:1059:-95.6196,-9.0309,0	0/1:95:49,46:49:1760:46:1643:-119.56,0,-130.086	0/1:57:38,19:38:1360:19:684:-44.7316,0,-105.542	1/1:121:0,121:0:0:121:4300:-387.179,-36.4246,0	1/1:145:0,144:0:0:144:5160:-464.18,-43.3483,0	0/1:137:75,62:75:2684:62:2224:-159.183,0,-200.564	1/1:109:1,108:1:36:108:3880:-345.795,-29.214,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:97:53,43:53:1893:43:1527:-108.464,0,-141.388	0/1:99:46,53:46:1656:53:1892:-140.756,0,-119.526	0/1:161:87,74:87:3116:74:2649:-190.191,0,-232.201	0/1:80:32,48:32:1148:48:1710:-130.103,0,-79.5474	0/1:59:27,32:27:972:32:1140:-85.1484,0,-70.0371	1/1:76:0,76:0:0:76:2719:-244.953,-22.8783,0	0/1:124:53,71:53:1908:71:2530:-190.623,0,-134.67	0/1:34:17,17:17:608:17:612:-45.1784,0,-44.817	1/1:73:0,73:0:0:73:2617:-235.778,-21.9752,0	1/1:59:0,59:0:0:59:2116:-190.709,-17.7608,0	0/1:51:34,17:34:1220:17:612:-40.0609,0,-94.7543	0/1:94:46,48:46:1656:48:1708:-125.709,0,-121.032	0/1:49:33,16:33:1188:16:576:-37.4245,0,-92.4781	1/1:88:0,88:0:0:88:3156:-284.265,-26.4906,0	1/1:69:0,69:0:0:69:2453:-221.023,-20.7711,0
chr01	31957139	.	A	G	338660	PASS	AB=0.507443;ABP=6.69539;AC=149;AF=0.792553;AN=188;AO=12785;CIGAR=1X;DP=16586;DPB=16586;DPRA=0;EPP=27765.3;EPPR=8248.09;GTI=1;LEN=1;MEANALT=1.04255;MQM=50.9324;MQMR=58.2652;NS=94;NUMALT=1;ODDS=1.89309;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=452700;QR=135050;RO=3797;RPL=6015;RPP=99.8264;RPPR=153.514;RPR=6770;RUN=1;SAF=6015;SAP=99.8264;SAR=6770;SRF=1642;SRP=153.514;SRR=2155;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:97:0,97:0:0:97:3453:-308.995,-29.1999,0	0/1:263:142,121:142:5068:121:4300:-297.583,0,-376.363	1/1:276:0,276:0:0:276:9770:-870.483,-83.0843,0	1/1:403:0,403:0:0:403:14306:-1268.41,-121.315,0	0/1:78:38,40:38:1360:40:1440:-104.709,0,-99.1848	0/1:102:32,70:32:1124:70:2516:-190.849,0,-70.6109	0/1:250:127,123:127:4486:123:4383:-313.323,0,-328.216	1/1:214:1,213:1:36:213:7460:-655.576,-60.8221,0	1/1:190:0,190:0:0:190:6761:-600.163,-57.1957,0	1/1:200:0,200:0:0:200:7086:-627.59,-60.206,0	1/1:151:0,151:0:0:151:5336:-474.138,-45.4555,0	1/1:167:0,167:0:0:167:5912:-525.538,-50.272,0	0/1:157:74,83:74:2602:83:2913:-211.606,0,-187.034	0/1:136:69,67:69:2423:67:2356:-168.007,0,-177.253	0/1:152:73,79:73:2608:79:2778:-200.537,0,-189.086	1/1:147:0,147:0:0:147:5197:-462.837,-44.2514,0	1/1:136:0,136:0:0:136:4797:-421.622,-40.9401,0	0/1:112:66,46:66:2344:46:1644:-110.524,0,-177.425	0/1:58:26,32:26:910:32:1131:-82.963,0,-64.6568	0/1:244:132,112:132:4727:112:3951:-276.736,0,-351.581	0/1:269:142,127:142:5104:127:4520:-320.895,0,-378.001	0/1:103:57,46:57:2044:46:1616:-114.305,0,-153.216	1/1:149:0,149:0:0:149:5269:-468.503,-44.8535,0	1/1:198:10,188:10:360:188:6639:-557.101,-26.9544,0	1/1:113:0,113:0:0:113:4017:-355.377,-34.0164,0	0/1:531:246,285:246:8798:285:10071:-743.723,0,-631.801	1/1:258:0,258:0:0:258:9171:-814.327,-77.6657,0	1/1:76:0,76:0:0:76:2710:-239.586,-22.8783,0	0/1:358:174,184:174:6215:184:6518:-477.614,0,-451.518	1/1:378:2,376:2:72:376:13226:-1158.81,-106.953,0	1/1:234:0,234:0:0:234:8263:-732.216,-70.441,0	1/1:13:0,13:0:0:13:460:-41.2139,-3.91339,0	1/1:30:0,30:0:0:30:1071:-95.4988,-9.0309,0	0/1:9:6,3:6:212:3:108:-7.11538,0,-16.6564	1/1:14:0,14:0:0:14:496:-44.5325,-4.21442,0	1/1:33:0,33:0:0:33:1171:-105.083,-9.93399,0	0/1:393:182,211:182:6475:211:7429:-547.311,0,-464.156	1/1:206:0,206:0:0:206:7337:-649.155,-62.0122,0	0/1:132:62,70:62:2165:70:2462:-177.584,0,-155.259	0/1:5:4,1:4:144:1:36:-1.99755,0,-11.8085	0/1:268:127,141:127:4519:141:5009:-361.513,0,-325.865	1/1:67:0,67:0:0:67:2359:-209.744,-20.169,0	1/1:243:0,243:0:0:243:8587:-762.983,-73.1503,0	1/1:146:0,146:0:0:146:5171:-456.034,-43.9504,0	1/1:143:0,143:0:0:143:5046:-447.339,-43.0473,0	1/1:209:0,209:0:0:209:7420:-666.429,-62.9153,0	1/1:212:2,209:2:72:209:7426:-647.306,-57.0373,0	0/1:308:119,189:119:4203:189:6681:-499.09,0,-285.397	0/1:216:88,128:88:3152:128:4550:-337.343,0,-218.639	0/1:192:84,108:84:3000:108:3880:-285.386,0,-212.289	0/1:241:110,131:110:3896:131:4686:-348.637,0,-278.279	1/1:7:0,7:0:0:7:248:-22.402,-2.10721,0	1/1:320:2,317:2:72:317:11186:-981.945,-89.5497,0	1/1:113:0,113:0:0:113:3994:-358.683,-34.0164,0	1/1:26:0,26:0:0:26:932:-83.3268,-7.82678,0	1/1:213:0,213:0:0:213:7575:-669.841,-64.1194,0	1/1:68:0,68:0:0:68:2343:-209.736,-20.47,0	1/1:14:0,14:0:0:14:500:-45.3328,-4.21442,0	0/1:47:27,20:27:943:20:716:-50.5945,0,-70.9484	1/1:169:0,169:0:0:169:6033:-535.205,-50.8741,0	1/1:171:0,171:0:0:171:6034:-534.416,-51.4761,0	1/1:20:0,20:0:0:20:702:-63.112,-6.0206,0	1/1:360:0,360:0:0:360:12871:-1155.47,-108.371,0	0/1:315:142,173:142:5071:173:6104:-445.059,0,-361.3	1/1:156:0,156:0:0:156:5524:-489.476,-46.9607,0	1/1:113:0,113:0:0:113:3958:-349.629,-34.0164,0	1/1:290:3,287:3:104:287:10173:-892.086,-77.5997,0	0/1:300:197,103:197:7035:103:3674:-236.549,0,-542.568	1/1:70:1,69:1:36:69:2466:-215.571,-17.4738,0	1/1:142:0,142:0:0:142:5043:-448.296,-42.7463,0	1/1:154:0,154:0:0:154:5451:-489.351,-46.3586,0	1/1:40:0,40:0:0:40:1421:-126.14,-12.0412,0	0/1:209:99,110:99:3523:110:3877:-282.062,0,-254.192	0/1:173:99,74:99:3517:74:2607:-179.463,0,-264.589	1/1:264:0,264:0:0:264:9361:-832.995,-79.4719,0	1/1:329:0,329:0:0:329:11744:-1040.17,-99.0389,0	0/1:175:74,101:74:2652:101:3575:-264.536,0,-186.184	1/1:241:5,235:5:176:235:8303:-718.462,-56.4196,0	1/1:13:0,13:0:0:13:459:-41.3718,-3.91339,0	0/1:249:110,139:110:3925:139:4913:-358.841,0,-277.938	0/1:146:72,74:72:2527:74:2594:-186.982,0,-183.636	0/1:372:189,183:189:6753:183:6492:-463.781,0,-495.159	0/1:166:99,67:99:3452:67:2364:-159.153,0,-260.042	0/1:129:57,72:57:2010:72:2530:-186.51,0,-142.178	1/1:156:0,156:0:0:156:5562:-491.297,-46.9607,0	0/1:292:144,148:144:5081:148:5146:-368.648,0,-369.14	0/1:67:34,32:34:1212:32:1125:-77.2961,0,-88.894	1/1:148:0,148:0:0:148:5215:-460.371,-44.5524,0	1/1:173:0,173:0:0:173:6133:-543.551,-52.0782,0	0/1:100:49,51:49:1727:51:1796:-129.654,0,-125.491	0/1:180:88,92:88:3152:92:3247:-233.218,0,-229.315	0/1:161:111,50:111:3963:50:1755:-107,0,-307.985	1/1:223:0,223:0:0:223:7850:-697.253,-67.1297,0	1/1:232:0,232:0:0:232:8209:-728.635,-69.839,0
chr01	32402432	.	C	T	187813	PASS	AB=0.47886;ABP=27.5237;AC=148;AF=0.787234;AN=188;AO=8961;CIGAR=1X;DP=12276;DPB=12276;DPRA=0;EPP=19461.6;EPPR=7184.07;GTI=5;LEN=1;MEANALT=1.08511;MQM=59.983;MQMR=60;NS=94;NUMALT=1;ODDS=1.17385;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=321114;QR=117926;RO=3307;RPL=0;RPP=19461.6;RPPR=7184.07;RPR=8961;RUN=1;SAF=8961;SAP=19461.6;SAR=0;SRF=3307;SRP=7184.07;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:44:0,44:0:0:44:1568:-141.411,-13.2453,0	0/1:228:99,129:99:3520:129:4616:-346.969,0,-248.377	1/1:125:0,125:0:0:125:4465:-402.019,-37.6288,0	1/1:258:2,256:2:72:256:9160:-817.53,-70.829,0	0/1:128:55,73:55:1976:73:2616:-197.156,0,-139.583	0/1:72:36,36:36:1284:36:1288:-94.5494,0,-94.1893	0/1:126:43,83:43:1532:83:2957:-228.434,0,-100.243	1/1:196:2,194:2:68:194:6940:-618.209,-52.5442,0	1/1:177:0,177:0:0:177:6336:-570.314,-53.2823,0	1/1:105:0,105:0:0:105:3752:-337.881,-31.6082,0	1/1:72:0,72:0:0:72:2584:-232.809,-21.6742,0	1/1:72:1,71:1:36:71:2540:-225.252,-18.0759,0	0/1:88:38,50:38:1356:50:1800:-135.792,0,-95.8498	0/1:63:29,34:29:1040:34:1224:-91.5022,0,-74.9495	0/1:92:43,49:43:1540:49:1756:-130.629,0,-111.198	1/1:74:0,74:0:0:74:2664:-240.005,-22.2762,0	1/1:75:0,75:0:0:75:2692:-242.524,-22.5773,0	0/1:96:60,36:60:2148:36:1288:-87.3247,0,-164.689	0/1:35:16,19:16:576:19:680:-50.9931,0,-41.6389	0/1:352:185,167:185:6596:167:5992:-433.421,0,-487.762	0/1:249:132,117:132:4740:117:4196:-302.864,0,-351.8	0/1:134:100,34:100:3556:34:1216:-69.4085,0,-279.912	1/1:140:0,140:0:0:140:5032:-453.001,-42.1442,0	1/1:138:8,129:8:288:129:4632:-390.756,-15.3335,0	1/1:97:0,97:0:0:97:3480:-313.411,-29.1999,0	0/1:523:265,258:265:9426:258:9264:-676.285,0,-690.868	1/1:275:1,274:1:36:274:9833:-881.311,-79.185,0	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	0/1:354:199,154:199:7100:154:5524:-390.661,0,-532.439	1/1:188:0,188:0:0:188:6732:-605.953,-56.5936,0	1/1:178:0,177:0:0:177:6364:-572.117,-53.2823,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:7:6,1:6:212:1:36:-1.49107,0,-17.3176	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	0/1:238:123,115:123:4367:115:4126:-299.878,0,-321.562	0/1:344:173,171:173:6184:171:6129:-448.13,0,-453.105	0/1:87:30,57:30:1076:57:2048:-158.402,0,-70.9632	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:168:82,86:82:2924:86:3077:-226.583,0,-212.823	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	1/1:183:0,183:0:0:183:6545:-589.131,-55.0885,0	1/1:130:0,130:0:0:130:4676:-420.999,-39.1339,0	1/1:91:0,91:0:0:91:3264:-293.98,-27.3937,0	1/1:141:0,141:0:0:141:5045:-454.038,-42.4452,0	1/1:123:1,122:1:36:122:4376:-390.415,-33.4284,0	0/1:239:114,124:114:4044:124:4433:-327.135,0,-292.147	0/1:155:80,75:80:2833:75:2688:-195.505,0,-208.549	0/1:253:137,115:137:4912:115:4125:-295.214,0,-366.011	0/1:224:111,113:111:3944:113:4017:-294.289,0,-287.724	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:112:0,112:0:0:112:3993:-359.56,-33.7154,0	1/1:35:0,35:0:0:35:1248:-112.624,-10.5361,0	1/1:32:0,32:0:0:32:1148:-103.63,-9.63296,0	1/1:132:0,132:0:0:132:4716:-424.601,-39.736,0	1/1:74:0,74:0:0:74:2656:-239.286,-22.2762,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:39:24,15:24:860:15:532:-36.4729,0,-65.9817	1/1:121:0,121:0:0:121:4324:-389.337,-36.4246,0	1/1:123:1,122:1:36:122:4391:-391.762,-33.4284,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:316:0,315:0:0:315:11277:-1014.44,-94.8245,0	0/1:297:165,132:165:5888:132:4736:-336.992,0,-440.627	1/1:126:2,124:2:72:124:4456:-394.372,-31.0931,0	1/1:81:0,81:0:0:81:2908:-261.955,-24.3834,0	1/1:302:2,300:2:68:300:10726:-958.787,-84.4534,0	0/1:106:74,31:74:2648:31:1100:-67.3425,0,-206.599	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:103:56,47:56:1996:47:1684:-120.841,0,-148.908	1/1:87:0,87:0:0:87:3120:-281.026,-26.1896,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	0/1:58:31,27:31:1108:27:964:-69.6171,0,-82.5713	0/1:91:46,45:46:1624:45:1620:-118.696,0,-119.055	1/1:246:0,246:0:0:246:8820:-793.785,-74.0534,0	1/1:245:1,244:1:36:244:8747:-783.618,-70.1541,0	0/1:128:75,53:75:2692:53:1896:-132.386,0,-203.992	1/1:215:0,215:0:0:215:7720:-694.83,-64.7215,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/1:156:72,84:72:2572:84:3004:-223.631,0,-184.769	0/1:158:92,66:92:3272:66:2368:-165.815,0,-247.139	0/1:288:142,146:142:5064:146:5240:-385.039,0,-369.211	0/1:120:72,48:72:2564:48:1720:-118.962,0,-194.887	0/1:77:41,36:41:1460:36:1292:-93.4045,0,-108.517	1/1:154:0,154:0:0:154:5497:-494.787,-46.3586,0	0/1:196:107,88:107:3804:88:3148:-224.485,0,-283.5	0/1:53:25,28:25:900:28:1004:-74.7213,0,-65.3664	1/1:99:0,99:0:0:99:3560:-320.607,-29.802,0	1/1:102:0,102:0:0:102:3651:-328.794,-30.7051,0	0/1:34:13,21:13:452:21:752:-57.7712,0,-30.7761	0/1:70:36,34:36:1284:34:1220:-89.0347,0,-94.7913	0/1:86:59,27:59:2104:27:964:-61.1882,0,-163.741	1/1:152:0,152:0:0:152:5460:-491.526,-45.7566,0	1/1:117:0,117:0:0:117:4196:-377.809,-35.2205,0
chr01	32722881	.	A	C	358134	PASS	AB=0.595413;ABP=1154.55;AC=133;AF=0.707447;AN=188;AO=16400;CIGAR=1X;DP=24565;DPB=24565;DPRA=0;EPP=35615.2;EPPR=17711.4;GTI=54;LEN=1;MEANALT=1.09574;MQM=40.4836;MQMR=10.097;NS=94;NUMALT=1;ODDS=77.6321;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=584726;QR=291552;RO=8155;RPL=0;RPP=35615.2;RPPR=17711.4;RPR=16400;RUN=1;SAF=16400;SAP=35615.2;SAR=0;SRF=8155;SRP=17711.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:76:30,46:30:1065:46:1656:-121.235,0,-4.16894	1/1:327:97,230:97:3435:230:8227:-626.897,-11.2049,0	0/1:391:142,249:142:5089:249:8837:-649.788,0,-10.043	1/1:298:95,203:95:3401:203:7251:-539.317,-4.21836,0	0/1:231:104,127:104:3732:127:4528:-325.18,0,-24.0662	0/1:180:78,102:78:2804:102:3654:-264.059,0,-16.2241	0/1:356:147,209:147:5276:209:7456:-536.202,0,-25.188	0/1:722:261,461:261:9334:461:16395:-1210.34,0,-19.8061	1/1:106:22,84:22:792:84:2980:-239.464,-12.0287,0	0/1:283:116,167:116:4149:167:5963:-429.704,0,-19.3555	0/1:266:116,150:116:4149:150:5354:-382.923,0,-24.2934	1/1:127:33,94:33:1188:94:3354:-262.473,-8.46003,0	1/1:144:42,102:42:1512:102:3656:-280.586,-5.48549,0	0/1:382:153,227:153:5496:227:8050:-585.204,0,-22.9292	1/1:101:21,80:21:756:80:2864:-224.545,-11.4227,0	0/1:145:64,81:64:2273:81:2869:-206.092,0,-14.1424	0/1:297:141,156:141:5053:156:5567:-395.764,0,-37.4408	1/1:180:46,134:46:1648:134:4795:-376.022,-12.7288,0	1/1:154:32,122:32:1144:122:4344:-348.579,-17.4896,0	1/1:862:258,603:258:9226:603:21517:-1626.15,-27.522,0	0/1:363:130,233:130:4638:233:8307:-610.474,0,-9.89044	1/1:123:23,100:23:805:100:3538:-282.254,-15.2542,0	1/1:61:19,42:19:684:42:1508:-113.506,-1.1797,0	0/1:336:144,191:144:5153:191:6810:-489.106,0,-30.3638	0/1:157:51,106:51:1813:106:3775:-281.739,0,-0.920863	1/1:543:153,390:153:5461:390:13964:-1064.68,-24.8495,0	0/1:670:250,420:250:8885:420:14930:-1097.08,0,-24.3669	0/1:80:36,44:36:1292:44:1562:-112.38,0,-9.27843	0/1:601:219,382:219:7838:382:13650:-998.818,0,-16.03	1/1:300:82,218:82:2906:218:7777:-601.283,-15.2162,0	0/1:224:101,123:101:3621:123:4388:-311.627,0,-23.4539	0/1:15:7,8:7:252:8:288:-20.8936,0,-1.87827	1/1:73:23,49:23:824:49:1752:-132.075,-1.23362,0	0/1:15:5,10:5:176:10:360:-27.0742,0,-0.0786786	0/1:33:17,16:17:612:16:568:-40.086,0,-5.45091	0/1:40:16,24:16:576:24:860:-63.1054,0,-2.44458	1/1:375:101,274:101:3609:274:9778:-752.84,-21.1134,0	1/1:906:133,773:133:4750:773:27549:-2268.9,-151.778,0	0/1:271:114,157:114:4092:157:5627:-401.863,0,-22.2544	0/1:5:2,3:2:72:3:104:-7.93078,0,-0.392987	0/1:396:161,235:161:5745:235:8358:-606.224,0,-25.7016	1/1:143:47,96:47:1684:96:3444:-255.642,-0.691539,0	0/1:338:120,218:120:4293:218:7767:-570.656,0,-6.21572	0/1:134:63,71:63:2241:71:2519:-177.847,0,-16.3761	0/1:128:48,80:48:1724:80:2841:-205.51,0,-4.72436	1/1:107:33,74:33:1188:74:2636:-198.608,-2.43943,0	1/1:201:43,158:43:1521:158:5623:-451.493,-21.7753,0	0/1:406:167,238:167:5924:238:8471:-609.872,0,-27.8776	0/1:190:85,105:85:3029:105:3741:-266.275,0,-19.2977	1/1:1049:122,927:122:4380:927:33024:-2737.88,-205.992,0	0/1:412:166,246:166:5922:246:8802:-636.759,0,-25.2688	1/1:55:18,37:18:644:37:1320:-97.1779,-0.273974,0	0/1:418:165,253:165:5920:253:9084:-664.626,0,-22.7069	0/1:207:102,105:102:3652:105:3741:-259.382,0,-29.49	1/1:39:2,37:2:72:37:1320:-113.289,-9.84203,0	0/1:291:104,187:104:3672:187:6631:-489.064,0,-6.99672	1/1:34:7,27:7:252:27:972:-77.8075,-3.8413,0	1/1:30:6,24:6:216:24:856:-69.0334,-3.53629,0	0/1:54:20,34:20:712:34:1212:-88.8745,0,-1.82395	0/1:271:131,139:131:4700:139:4963:-349.472,0,-36.7029	1/1:347:87,260:87:3113:260:9297:-723.68,-26.1618,0	1/1:41:10,31:10:341:31:1088:-85.1147,-3.2789,0	1/1:220:58,161:58:2084:161:5738:-442.025,-12.6959,0	0/1:532:241,291:241:8621:291:10368:-735.398,0,-58.6717	1/1:772:117,655:117:4174:655:23381:-1923.78,-123.834,0	0/1:260:108,152:108:3868:152:5404:-388.733,0,-18.9301	1/1:245:66,179:66:2357:179:6396:-492.521,-14.3382,0	0/1:372:151,221:151:5386:221:7884:-567.081,0,-25.0625	1/1:145:32,113:32:1152:113:4042:-322.87,-14.7777,0	0/1:241:86,154:86:3058:154:5460:-402.981,0,-11.4185	0/1:351:151,200:151:5412:200:7171:-512.314,0,-30.2869	1/1:70:18,52:18:633:52:1840:-143.483,-4.81435,0	0/1:194:75,119:75:2666:119:4208:-308.341,0,-9.08026	0/1:134:63,71:63:2245:71:2520:-178.645,0,-16.3775	0/1:463:205,258:205:7357:258:9155:-654.524,0,-45.9051	1/1:293:54,239:54:1932:239:8504:-686.711,-39.5535,0	0/1:432:146,286:146:5229:286:10190:-757.23,0,-2.70075	1/1:341:75,266:75:2677:266:9511:-754.285,-34.1355,0	0/1:45:15,30:15:536:30:1076:-80.4185,0,-0.0389721	1/1:205:51,154:51:1824:154:5460:-427.333,-15.7603,0	0/1:307:124,183:124:4437:183:6488:-470.784,0,-19.2339	0/1:567:200,367:200:7157:367:13094:-959.892,0,-9.20393	1/1:198:50,148:50:1796:148:5271:-405.79,-12.0948,0	0/1:187:74,113:74:2656:113:4017:-291.455,0,-10.3393	0/1:166:71,95:71:2556:95:3403:-244.317,0,-13.9663	1/1:239:59,180:59:2116:180:6420:-498.119,-18.801,0	0/1:103:43,60:43:1544:60:2148:-156.277,0,-7.75453	1/1:128:39,89:39:1404:89:3184:-241.657,-3.27636,0	0/1:138:62,76:62:2217:76:2732:-196.545,0,-14.3668	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chr01	32722895	.	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chr01	32759529	.	TG	CA,CG	240213	PASS	AB=0.484348,0.513904;ABP=16.4018,13.5778;AC=145,43;AF=0.771277,0.228723;AN=188;AO=8174,3256;CIGAR=2X,1X1M;DP=11446;DPB=11446.5;DPRA=24.6043,1.5575;EPP=17752.6,7073.32;EPPR=5.18177;GTI=5;LEN=2,1;MEANALT=1.66667,2.15686;MQM=47.1928,59.7847;MQMR=60;NS=94;NUMALT=2;ODDS=0.481589;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=36,0;PQR=0;PRO=0;QA=291104,116492;QR=36;RO=1;RPL=0,0;RPP=17752.6,7073.32;RPPR=5.18177;RPR=8174,3256;RUN=1,1;SAF=8174,3256;SAP=17752.6,7073.32;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:47:0,47,0:0:0:47,0:1688,0:-151.033,-14.1484,0,-151.033,-14.1484,-151.033	1/2:227:0,120,107:0:0:120,107:4273,3820:-655.658,-311.749,-275.626,-344.263,0,-312.053	1/1:192:0,192,0:0:0:192,0:6804,0:-607.308,-57.7978,0,-607.308,-57.7978,-607.308	1/1:151:0,151,0:0:0:151,0:5374,0:-477.701,-45.4555,0,-477.701,-45.4555,-477.701	1/2:109:0,52,57:0:0:52,57:1848,2044:-316.399,-166.997,-151.344,-149.757,0,-132.598	1/2:79:0,34,45:0:0:34,45:1224,1620:-230.466,-132.541,-122.306,-98.2809,0,-84.7346	1/2:124:0,55,69:0:0:55,69:1963,2476:-359.799,-202.232,-185.675,-157.923,0,-137.152	1/1:157:0,157,0:0:0:157,0:5570,0:-496.345,-47.2617,0,-496.345,-47.2617,-496.345	1/2:90:0,48,42:0:0:48,42:1698,1508:-259.096,-123.371,-108.922,-136.078,0,-123.435	1/1:115:0,115,0:0:0:115,0:4084,0:-364.592,-34.6185,0,-364.592,-34.6185,-364.592	1/1:167:0,166,1:0:0:166,1:5925,36:-525.088,-49.971,0,-522.15,-46.6737,-521.849	1/1:123:0,123,0:0:0:123,0:4414,0:-394.661,-37.0267,0,-394.661,-37.0267,-394.661	1/2:101:0,51,50:0:0:51,50:1819,1798:-294.27,-147.048,-131.696,-147.579,0,-132.527	1/2:172:0,80,91:0:0:80,91:2844,3264:-494.854,-266.219,-242.136,-228.63,0,-201.236	1/2:89:0,47,42:0:0:47,42:1664,1508:-256.625,-123.369,-109.221,-133.61,0,-120.967	1/1:93:0,93,0:0:0:93,0:3306,0:-294.188,-27.9958,0,-294.188,-27.9958,-294.188	1/1:142:0,141,1:0:0:141,1:5024,36:-447.503,-42.4452,0,-444.566,-39.148,-444.265	1/2:88:0,43,45:0:0:43,45:1544,1598:-254.309,-130.559,-117.614,-124.105,0,-110.558	1/2:100:0,43,57:0:0:43,57:1508,2048:-287.627,-167.431,-154.486,-120.546,0,-103.388	1/2:224:0,109,115:0:0:109,115:3893,4120:-649.045,-336.273,-303.46,-313.127,0,-278.509	1/2:179:0,89,90:0:0:89,90:3171,3224:-519.116,-263.289,-236.497,-256.183,0,-229.09	1/2:101:0,38,63:0:0:38,63:1366,2260:-295.072,-184.696,-173.257,-110.733,0,-91.7679	1/1:45:0,45,0:0:0:45,0:1614,0:-143.801,-13.5464,0,-143.801,-13.5464,-143.801	1/1:75:0,71,4:0:0:71,4:2542,144:-226.228,-21.3731,0,-214.483,-9.26838,-213.279	1/1:85:0,85,0:0:0:85,0:3019,0:-269.594,-25.5876,0,-269.594,-25.5876,-269.594	1/2:378:0,202,175:0:0:202,175:7180,6249:-1084.54,-509.451,-448.643,-575.082,0,-522.402	1/1:270:0,270,0:0:0:270,0:9611,0:-855.156,-81.2781,0,-855.156,-81.2781,-855.156	1/1:63:0,63,0:0:0:63,0:2259,0:-201.313,-18.9649,0,-201.313,-18.9649,-201.313	1/2:408:0,223,185:0:0:223,185:7936,6619:-1175,-540.094,-472.964,-635.263,0,-579.573	1/1:139:0,139,0:0:0:139,0:4963,0:-441.756,-41.8432,0,-441.756,-41.8432,-441.756	1/1:78:0,78,0:0:0:78,0:2772,0:-246.866,-23.4803,0,-246.866,-23.4803,-246.866	1/1:9:0,9,0:0:0:9,0:311,0:-28.1407,-2.70927,0,-28.1407,-2.70927,-28.1407	1/1:17:0,17,0:0:0:17,0:610,0:-54.8584,-5.11751,0,-54.8584,-5.11751,-54.8584	1/2:4:0,2,2:0:0:2,2:72,72:-12.0734,-6.23466,-5.6326,-6.1976,0,-5.59554	1/1:9:0,9,0:0:0:9,0:307,0:-27.5809,-2.70927,0,-27.5809,-2.70927,-27.5809	1/1:12:0,12,0:0:0:12,0:417,0:-37.6891,-3.61236,0,-37.6891,-3.61236,-37.6891	1/2:297:0,126,171:0:0:126,171:4497,6136:-862.189,-500.802,-462.872,-361.742,0,-310.266	1/2:155:0,83,72:0:0:83,72:2944,2584:-448.018,-210.999,-186.013,-237.374,0,-215.699	1/2:127:0,74,53:0:0:74,53:2653,1900:-369.518,-155.319,-133.043,-214.556,0,-198.601	2/2:5:0,0,5:0:0:0,5:0,176:-16.1841,-16.1841,-16.1841,-1.50515,-1.50515,0	1/2:124:0,71,53:0:0:71,53:2550,1876:-358.316,-153.162,-131.789,-205.507,0,-189.553	1/1:75:0,75,0:0:0:75,0:2669,0:-237.803,-22.5773,0,-237.803,-22.5773,-237.803	1/1:211:0,211,0:0:0:211,0:7489,0:-665.032,-63.5173,0,-665.032,-63.5173,-665.032	1/1:96:0,96,0:0:0:96,0:3431,0:-304.348,-28.8989,0,-304.348,-28.8989,-304.348	1/1:93:0,92,0:0:0:92,0:3254,0:-288.875,-27.6948,0,-288.875,-27.6948,-288.875	1/1:82:0,82,0:0:0:82,0:2907,0:-259.224,-24.6845,0,-259.224,-24.6845,-259.224	1/1:147:0,147,0:0:0:147,0:5215,0:-465.285,-44.2514,0,-465.285,-44.2514,-465.285	1/2:211:0,106,105:0:0:106,105:3794,3746:-610.026,-305.658,-273.749,-304.722,0,-273.114	1/1:166:0,166,0:0:0:166,0:5944,0:-529.231,-49.971,0,-529.231,-49.971,-529.231	1/2:204:0,110,94:0:0:110,94:3933,3372:-592.418,-275.381,-242.267,-317.394,0,-289.097	1/2:188:0,98,90:0:0:98,90:3490,3220:-543.132,-262.929,-233.428,-280.558,0,-253.465	1/1:8:0,7,0:0:0:7,0:252,0:-22.477,-2.10721,0,-22.477,-2.10721,-22.477	1/1:131:0,130,1:0:0:130,1:4643,36:-412.266,-39.1339,0,-409.329,-35.8367,-409.028	1/1:37:0,37,0:0:0:37,0:1293,0:-115.744,-11.1381,0,-115.744,-11.1381,-115.744	1/1:22:0,22,0:0:0:22,0:777,0:-69.0324,-6.62266,0,-69.0324,-6.62266,-69.0324	1/1:123:0,123,0:0:0:123,0:4382,0:-390.845,-37.0267,0,-390.845,-37.0267,-390.845	1/1:22:0,22,0:0:0:22,0:764,0:-68.2326,-6.62266,0,-68.2326,-6.62266,-68.2326	1/1:6:0,6,0:0:0:6,0:203,0:-18.4537,-1.80618,0,-18.4537,-1.80618,-18.4537	1/2:19:0,12,7:0:0:12,7:432,248:-55.4678,-20.557,-16.9446,-35.2659,0,-33.1587	1/1:125:0,125,0:0:0:125,0:4415,0:-392.833,-37.6288,0,-392.833,-37.6288,-392.833	1/1:193:0,192,1:0:0:192,1:6827,36:-606.933,-57.7978,0,-603.996,-54.5005,-603.695	1/1:10:0,10,0:0:0:10,0:349,0:-30.9602,-3.0103,0,-30.9602,-3.0103,-30.9602	1/1:166:0,166,0:0:0:166,0:5921,0:-525.589,-49.971,0,-525.589,-49.971,-525.589	1/2:237:1,87,149:1:36:87,149:3086,5289:-675.154,-427.808,-404.556,-244.701,0,-202.785	1/1:104:0,104,0:0:0:104,0:3694,0:-329.226,-31.3071,0,-329.226,-31.3071,-329.226	1/1:90:0,90,0:0:0:90,0:3183,0:-283.831,-27.0927,0,-283.831,-27.0927,-283.831	1/1:148:0,145,0:0:0:145,0:5179,0:-459.976,-43.6494,0,-459.976,-43.6494,-459.976	1/2:165:0,61,103:0:0:61,103:2173,3680:-475.534,-300.172,-281.809,-175.492,0,-144.486	1/1:73:0,71,2:0:0:71,2:2541,72:-226.465,-21.3731,0,-220.59,-15.1385,-219.988	1/2:112:0,57,55:0:0:57,55:2036,1964:-325.249,-160.477,-143.318,-165.128,0,-148.571	1/1:142:0,142,0:0:0:142,0:5074,0:-449.761,-42.7463,0,-449.761,-42.7463,-449.761	1/1:38:0,38,0:0:0:38,0:1343,0:-119.223,-11.4391,0,-119.223,-11.4391,-119.223	1/2:100:0,45,55:0:0:45,55:1596,1964:-289.043,-160.476,-146.929,-128.921,0,-112.365	1/2:80:0,44,36:0:0:44,36:1574,1288:-233.021,-105.387,-92.1412,-127.991,0,-117.154	1/1:126:0,126,0:0:0:126,0:4480,0:-398.495,-37.9298,0,-398.495,-37.9298,-398.495	1/2:146:0,65,81:0:0:65,81:2314,2904:-423.353,-237.207,-217.64,-186.501,0,-162.118	1/2:184:0,98,86:0:0:98,86:3520,3075:-535.872,-251.065,-221.564,-285.165,0,-259.276	1/1:115:0,113,2:0:0:113,2:4026,72:-358.909,-34.0164,0,-353.034,-28.1405,-352.432	1/1:6:0,6,0:0:0:6,0:216,0:-19.6964,-1.80618,0,-19.6964,-1.80618,-19.6964	1/2:183:0,66,117:0:0:66,117:2372,4196:-533.098,-342.586,-322.718,-190.868,0,-155.648	1/2:149:0,82,64:0:0:82,64:2933,2287:-422.736,-186.476,-161.792,-236.269,0,-217.003	1/2:254:0,121,132:0:0:121,132:4332,4712:-732.174,-384.109,-347.685,-348.06,0,-308.324	1/2:138:0,62,76:0:0:62,76:2215,2724:-400.324,-222.498,-203.834,-178.181,0,-155.303	1/2:112:0,46,66:0:0:46,66:1654,2368:-326.679,-193.504,-179.656,-133.531,0,-113.663	1/1:131:0,130,1:0:0:130,1:4603,36:-410.003,-39.1339,0,-407.065,-35.8367,-406.764	1/2:192:0,99,93:0:0:99,93:3514,3336:-553.838,-272.415,-242.613,-281.777,0,-253.781	1/2:56:0,33,22:0:0:33,22:1178,792:-159.823,-64.6232,-54.6892,-95.1981,0,-88.5754	1/1:116:0,116,0:0:0:116,0:4136,0:-367.483,-34.9195,0,-367.483,-34.9195,-367.483	1/1:107:0,107,0:0:0:107,0:3824,0:-339.729,-32.2102,0,-339.729,-32.2102,-339.729	1/2:104:0,54,50:0:0:54,50:1916,1792:-300.751,-146.5,-130.245,-154.606,0,-139.554	1/2:185:0,88,97:0:0:88,97:3121,3458:-532.676,-282.226,-255.735,-250.803,0,-221.603	1/2:98:0,24,72:0:0:24,72:864,2565:-278.503,-209.018,-201.793,-69.5309,0,-47.8567	1/1:101:0,97,4:0:0:97,4:3451,144:-305.445,-29.1999,0,-293.695,-17.0904,-292.491	1/1:149:0,149,0:0:0:149,0:5311,0:-471.961,-44.8535,0,-471.961,-44.8535,-471.961
chr01	32759579	.	CGAC	TGAA,CGAA	564451	PASS	AB=0.477433,0.519958;ABP=53.8765,42.7953;AC=146,42;AF=0.776596,0.223404;AN=188;AO=14997,6012;CIGAR=1X2M1X,3M1X;DP=21061;DPB=21067;DPRA=0,1.46648;EPP=32542.5,13049.2;EPPR=5.18177;GTI=6;LEN=4,1;MEANALT=2.10638,2.46667;MQM=53.1177,59.8541;MQMR=60;NS=94;NUMALT=2;ODDS=2.06848;PAIRED=0,0;PAIREDR=0;PAO=24,0;PQA=813,0;PQR=0;PRO=0;QA=527455,214354;QR=23;RO=1;RPL=7955,3200;RPP=123.706,57.3852;RPPR=5.18177;RPR=7042,2812;RUN=1,1;SAF=7954,3199;SAP=123.178,56.8261;SAR=7043,2813;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:68:0,68,0:0:0:68,0:2376,0:-213.101,-20.47,0,-213.101,-20.47,-213.101	1/2:382:0,188,194:0:0:188,194:6649,6925:-1102.73,-564.88,-508.287,-538.2,0,-479.8	1/1:387:0,387,0:0:0:387,0:13618,0:-1220.36,-116.499,0,-1220.36,-116.499,-1220.36	1/1:308:0,308,0:0:0:308,0:10783,0:-964.239,-92.7172,0,-964.239,-92.7172,-964.239	1/2:196:0,94,102:0:0:94,102:3321,3628:-565.242,-295.943,-267.646,-269.652,0,-238.947	1/2:127:0,53,74:0:0:53,74:1848,2656:-365.651,-217.007,-201.052,-148.995,0,-126.719	1/2:302:0,142,160:0:0:142,160:5016,5726:-873.673,-467.2,-424.454,-406.827,0,-358.662	1/1:326:0,324,1:0:0:324,1:11371,36:-1018.71,-97.5337,0,-1015.77,-94.5913,-1015.47	1/2:185:0,96,85:0:0:96,85:3354,3043:-518.9,-248.152,-219.253,-270.742,0,-245.154	1/1:249:0,249,0:0:0:249,0:8680,0:-778.537,-74.9565,0,-778.537,-74.9565,-778.537	1/1:226:0,225,1:0:0:225,1:7932,36:-706.225,-67.7318,0,-703.373,-64.5301,-703.072	1/1:213:0,213,0:0:0:213,0:7488,0:-671.098,-64.1194,0,-671.098,-64.1194,-671.098	1/2:205:0,105,97:0:0:105,97:3678,3479:-582.021,-283.758,-252.15,-298.258,0,-269.058	1/2:225:0,108,117:0:0:108,117:3772,4179:-644.733,-340.704,-308.193,-304.021,0,-268.801	1/2:177:0,85,91:0:0:85,91:3016,3260:-509.439,-266.011,-240.423,-243.571,0,-216.177	1/1:146:0,146,0:0:0:146,0:5131,0:-459.364,-43.9504,0,-459.364,-43.9504,-459.364	1/1:230:0,228,1:0:0:228,1:8040,32:-720.177,-68.6348,0,-717.599,-66.0337,-717.298	1/2:155:0,81,74:0:0:81,74:2872,2656:-448.915,-217.007,-192.623,-232.263,0,-209.987	1/2:155:0,70,85:0:0:70,85:2461,3011:-444.029,-245.629,-224.557,-198.751,0,-173.164	1/2:493:0,219,274:0:0:219,274:7734,9784:-1421.15,-795.312,-729.386,-625.865,0,-543.383	1/2:321:0,162,159:0:0:162,159:5698,5657:-922.747,-461.076,-412.309,-461.713,0,-413.849	1/2:190:0,68,122:0:0:68,122:2384,4351:-548.064,-355.038,-334.568,-193.377,0,-156.651	1/1:128:0,128,0:0:0:128,0:4480,0:-401.618,-38.5318,0,-401.618,-38.5318,-401.618	1/1:141:0,137,4:0:0:137,4:4844,144:-433.599,-41.2411,0,-421.854,-29.476,-420.649	1/1:157:0,157,0:0:0:157,0:5453,0:-488.873,-47.2617,0,-488.873,-47.2617,-488.873	1/2:689:0,357,332:0:0:357,332:12507,11825:-1973.8,-964.101,-856.633,-1010.05,0,-910.113	1/1:565:0,564,0:0:0:564,0:19867,0:-1778.35,-169.781,0,-1778.35,-169.781,-1778.35	1/1:107:0,106,1:0:0:106,1:3765,36:-336.688,-31.9092,0,-333.751,-28.6119,-333.45	1/2:792:0,364,423:0:0:364,423:12809,15082:-2261.34,-1229.43,-1119.85,-1031.93,0,-904.593	1/1:257:0,257,0:0:0:257,0:9053,0:-810.357,-77.3647,0,-810.357,-77.3647,-810.357	1/1:184:0,184,0:0:0:184,0:6471,0:-579.806,-55.3895,0,-579.806,-55.3895,-579.806	1/1:17:0,17,0:0:0:17,0:593,0:-53.5148,-5.11751,0,-53.5148,-5.11751,-53.5148	1/1:34:0,34,0:0:0:34,0:1197,0:-107.675,-10.235,0,-107.675,-10.235,-107.675	1/2:6:0,2,4:0:0:2,4:72,144:-17.9486,-12.1095,-11.5074,-6.1976,0,-4.99348	1/1:13:0,13,0:0:0:13,0:459,0:-41.1644,-3.91339,0,-41.1644,-3.91339,-41.1644	1/1:17:0,17,0:0:0:17,0:598,0:-53.9741,-5.11751,0,-53.9741,-5.11751,-53.9741	1/2:561:0,259,302:0:0:259,302:9130,10737:-1613.14,-874.907,-796.94,-738.229,0,-647.318	1/2:321:0,171,150:0:0:171,150:5973,5346:-918.899,-435.987,-384.511,-483.264,0,-438.109	1/2:213:0,113,100:0:0:113,100:3974,3567:-612.726,-291.13,-257.113,-321.95,0,-291.847	1/2:10:0,3,7:0:0:3,7:101,252:-29.0973,-20.9208,-20.0177,-8.52004,0,-6.41283	1/2:233:0,122,111:0:0:122,111:4290,3965:-670.472,-323.623,-286.898,-347.202,0,-313.788	1/1:138:0,138,0:0:0:138,0:4856,0:-434.529,-41.5421,0,-434.529,-41.5421,-434.529	1/1:343:0,343,0:0:0:343,0:12054,0:-1077.72,-103.253,0,-1077.72,-103.253,-1077.72	1/1:212:0,211,0:0:0:211,0:7446,0:-665.108,-63.5173,0,-665.108,-63.5173,-665.108	1/1:167:0,165,1:0:0:165,1:5812,32:-519.998,-49.67,0,-517.42,-47.11,-517.119	1/1:202:0,202,0:0:0:202,0:7117,0:-638.135,-60.8081,0,-638.135,-60.8081,-638.135	1/1:238:0,234,4:0:0:234,4:8224,135:-735.709,-70.441,0,-724.771,-59.4457,-723.567	1/2:350:0,165,184:0:0:165,184:5740,6576:-998.082,-536.037,-486.367,-462.038,0,-406.649	1/1:272:0,270,1:0:0:270,1:9523,36:-851.494,-81.2781,0,-848.557,-78.2708,-848.256	1/2:337:0,195,141:0:0:195,141:6897,5048:-970.122,-411.643,-352.942,-558.475,0,-516.029	1/2:242:1,125,116:1:23:125,116:4405,4125:-689.457,-334.516,-298.655,-353.595,0,-320.444	1/1:21:0,20,0:0:0:20,0:696,0:-62.4878,-6.0206,0,-62.4878,-6.0206,-62.4878	1/1:290:0,289,1:0:0:289,1:10146,36:-908.302,-86.9977,0,-905.364,-84.0401,-905.063	1/1:87:0,86,0:0:0:86,0:3006,0:-269.629,-25.8886,0,-269.629,-25.8886,-269.629	1/1:30:0,30,0:0:0:30,0:1061,0:-94.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chr01	33216349	.	A	G	103788	PASS	AB=0.517308;ABP=25.9363;AC=43;AF=0.228723;AN=188;AO=4591;CIGAR=1X;DP=18455;DPB=18455;DPRA=1.32677;EPP=9972.24;EPPR=30090.9;GTI=3;LEN=1;MEANALT=1;MQM=52.7942;MQMR=59.9645;NS=94;NUMALT=1;ODDS=1.54558;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163344;QR=494421;RO=13864;RPL=2521;RPP=99.2158;RPPR=3.01093;RPR=2070;RUN=1;SAF=2521;SAP=99.2158;SAR=2070;SRF=6935;SRP=3.01594;SRR=6929;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:129:72,57:72:2584:57:2036:-143.487,0,-193.976	0/1:289:123,166:123:4389:166:5937:-444.369,0,-308.185	0/0:349:349,0:349:12402:0:0:0,-105.059,-1116.01	0/0:393:393,0:393:13986:0:0:0,-118.305,-1258.51	0/1:108:62,46:62:2216:46:1644:-113.056,0,-167.193	0/1:45:29,16:29:1044:16:576:-38.4826,0,-80.7285	0/1:214:92,122:92:3296:122:4368:-325.502,0,-232.425	0/0:388:385,3:385:13754:3:108:0,-106.724,-1227.54	0/1:238:138,100:138:4901:100:3569:-248.423,0,-369.596	0/0:224:221,3:221:7859:3:108:0,-57.3849,-697.29	0/0:109:109,0:109:3867:0:0:0,-32.8123,-348.223	0/0:220:220,0:220:7859:0:0:0,-66.2266,-707.332	0/0:188:188,0:188:6710:0:0:0,-56.5936,-603.975	0/1:156:73,83:73:2592:83:2955:-217.776,0,-186.559	0/0:177:177,0:177:6314:0:0:0,-53.2823,-568.339	0/0:173:173,0:173:6163:0:0:0,-52.0782,-554.769	0/0:112:112,0:112:4009:0:0:0,-33.7154,-360.997	0/0:122:122,0:122:4375:0:0:0,-36.7257,-393.914	0/1:85:40,45:40:1428:45:1612:-117.401,0,-102.738	0/1:644:344,300:344:12239:300:10599:-753.636,0,-907.462	0/1:363:140,223:140:4984:223:7840:-590.994,0,-339.428	0/1:111:44,67:44:1565:67:2372:-178.709,0,-107.725	0/0:156:156,0:156:5565:0:0:0,-46.9607,-500.972	0/0:176:163,13:163:5784:13:464:0,-11.1109,-478.805	0/0:216:216,0:216:7738:0:0:0,-65.0225,-696.45	0/1:584:293,291:293:10434:291:10305:-744.606,0,-763.165	0/0:481:481,0:481:17186:0:0:0,-144.795,-1546.37	0/0:84:84,0:84:2988:0:0:0,-25.2865,-269.151	0/0:484:482,2:482:17227:2:72:0,-138.922,-1543.28	0/0:139:138,1:138:4935:1:36:0,-38.2697,-440.727	0/0:186:186,0:186:6635:0:0:0,-55.9916,-597.229	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:17:8,9:8:288:9:313:-23.3048,0,-21.1499	0/1:12:5,7:5:180:7:252:-19.3096,0,-12.9397	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:399:185,214:185:6615:214:7609:-559.115,0,-475.316	0/1:238:117,121:117:4200:121:4304:-311.718,0,-306.45	0/1:133:55,78:55:1934:78:2764:-207.704,0,-134.298	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:437:228,209:228:8160:209:7464:-533.964,0,-602.836	0/1:79:33,46:33:1173:46:1639:-122.2,0,-82.0942	0/0:375:375,0:375:13340:0:0:0,-112.886,-1200.37	0/0:148:148,0:148:5303:0:0:0,-44.5524,-477.403	0/0:140:140,0:140:5017:0:0:0,-42.1442,-451.674	0/0:199:199,0:199:7100:0:0:0,-59.905,-639.06	0/0:196:196,0:196:7004:0:0:0,-59.0019,-630.414	0/1:308:142,166:142:5092:166:5888:-433.291,0,-365.7	0/0:187:186,1:186:6663:1:36:0,-52.7258,-596.158	0/1:285:151,134:151:5390:134:4790:-341.22,0,-399.436	0/1:171:100,71:100:3566:71:2504:-172.253,0,-269.671	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:261:261,0:261:9300:0:0:0,-78.5688,-836.782	0/0:99:99,0:99:3524:0:0:0,-29.802,-317.369	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:291:291,0:291:10391:0:0:0,-87.5997,-935.098	0/0:85:84,1:84:3002:1:36:0,-22.0207,-266.844	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:16:8,8:8:284:8:288:-21.3361,0,-21.0869	0/0:110:110,0:110:3902:0:0:0,-33.1133,-351.045	0/0:193:193,0:193:6893:0:0:0,-58.0988,-620.438	1/1:4:0,4:0:0:4:144:-13.2263,-1.20412,0	0/0:306:305,1:305:10918:1:36:0,-88.5169,-978.918	0/1:348:162,186:162:5785:186:6563:-480.812,0,-416.006	0/0:138:138,0:138:4895:0:0:0,-41.5421,-440.703	0/0:202:202,0:202:7201:0:0:0,-60.8081,-648.144	0/0:330:329,1:329:11668:1:36:0,-95.7731,-1046.42	0/1:224:77,147:77:2719:147:5222:-400.499,0,-177.519	0/0:101:100,1:100:3565:1:36:0,-26.8306,-317.484	0/1:148:79,69:79:2815:69:2456:-175.243,0,-208.992	0/0:144:144,0:144:5122:0:0:0,-43.3483,-461.12	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/1:165:86,79:86:3055:79:2790:-200.484,0,-225.497	0/1:179:74,105:74:2636:105:3755:-281.787,0,-183.603	0/0:314:314,0:314:11154:0:0:0,-94.5234,-1003.75	0/1:308:150,158:150:5362:158:5668:-413.767,0,-389.995	0/1:188:119,69:119:4251:69:2471:-163.982,0,-326.167	0/0:276:275,1:275:9808:1:36:0,-79.5055,-879.087	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:264:139,125:139:4961:125:4452:-317.628,0,-367.167	0/1:259:140,119:140:5028:119:4203:-299.036,0,-374.689	0/1:520:252,268:252:8984:268:9559:-696.365,0,-651.98	0/1:152:60,92:60:2110:92:3296:-247.588,0,-144.409	0/1:190:97,93:97:3475:93:3320:-239.804,0,-255.765	0/0:187:187,0:187:6678:0:0:0,-56.2926,-601.091	0/1:291:134,157:134:4784:157:5605:-412.391,0,-343.116	0/1:59:26,33:26:936:33:1184:-88.3675,0,-66.7987	0/0:138:138,0:138:4849:0:0:0,-41.5421,-436.565	0/0:143:143,0:143:5101:0:0:0,-43.0473,-459.225	0/1:94:45,49:45:1607:49:1760:-129.318,0,-116.623	0/1:161:64,97:64:2268:97:3448:-260.686,0,-155.915	0/1:196:65,131:65:2316:131:4708:-361.777,0,-149.699	0/0:332:331,1:331:11802:1:36:0,-96.3437,-1058.11	0/0:267:267,0:267:9527:0:0:0,-80.375,-857.38
chr01	33216372	.	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chr01	33345465	.	CG	TG	31428.3	PASS	AB=0.511695;ABP=13.6766;AC=43;AF=0.228723;AN=188;AO=4619;CIGAR=1X1M;DP=22822;DPB=22822.5;DPRA=2.61813;EPP=9955.02;EPPR=38788.2;GTI=2;LEN=1;MEANALT=1.55556;MQM=27.7751;MQMR=30.1464;NS=94;NUMALT=1;ODDS=2.20296;PAIRED=0;PAIREDR=0;PAO=1;PQA=36;PQR=0;PRO=0;QA=125345;QR=639520;RO=18160;RPL=4610;RPP=9955.02;RPPR=38788.2;RPR=9;RUN=1;SAF=4619;SAP=10033;SAR=0;SRF=18158;SRP=39419.6;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:20,16:20:705:16:441:-25.0407,0,-41.6729	0/1:62:36,26:36:1226:26:711:-38.8057,0,-74.3943	0/0:114:114,0:114:4013:0:0:0,-34.3174,-299.369	0/0:181:181,0:181:6355:0:0:0,-54.4864,-464.504	0/1:57:31,26:31:1093:26:700:-39.0467,0,-63.2819	0/1:10:2,8:2:70:8:216:-14.5053,0,-2.59891	0/1:90:61,29:61:2159:29:779:-35.4108,0,-130.02	0/0:90:90,0:90:3170:0:0:0,-27.0927,-236.713	0/1:93:52,41:52:1856:41:1100:-60.4217,0,-110.171	0/0:58:58,0:58:2019:0:0:0,-17.4597,-149.09	0/0:402:402,0:402:14138:0:0:0,-121.014,-1034.15	0/0:99:99,0:99:3463:0:0:0,-29.802,-258.551	0/0:73:73,0:73:2560:0:0:0,-21.9752,-190.697	0/1:45:20,25:20:709:25:693:-43.1187,0,-38.59	0/0:61:61,0:61:2141:0:0:0,-18.3628,-156.884	0/0:92:92,0:92:3205:0:0:0,-27.6948,-235.856	0/0:32:32,0:32:1114:0:0:0,-9.63296,-83.8523	0/0:24:24,0:24:846:0:0:0,-7.22472,-63.8868	0/1:164:82,81:82:2870:81:2204:-126.941,0,-165.514	0/1:131:66,65:66:2332:65:1760:-101.891,0,-131.621	0/1:111:51,60:51:1771:60:1620:-96.3935,0,-95.0246	0/1:133:49,84:49:1745:84:2298:-144.944,0,-78.3054	0/0:150:150,0:150:5224:0:0:0,-45.1545,-382.046	0/1:26:22,4:22:781:4:108:-1.05101,0,-49.5752	0/0:105:105,0:105:3739:0:0:0,-31.6081,-273.046	0/0:230:228,0:228:8023:0:0:0,-68.6348,-582.984	0/0:201:201,0:201:7111:0:0:0,-60.507,-518.46	0/0:23:23,0:23:790:0:0:0,-6.92369,-58.5826	0/0:170:168,0:168:5926:0:0:0,-50.573,-430.915	0/0:125:123,2:123:4340:2:48:0,-33.639,-313.24	0/0:42:42,0:42:1508:0:0:0,-12.6433,-109.854	0/0:909:904,1:904:32083:1:29:0,-270.097,-2333.65	0/1:807:438,369:438:15413:369:10039:-563.466,0,-878.703	0/1:949:428,520:428:15124:520:14128:-848.744,0,-842.699	0/0:2183:2175,5:2175:76364:5:141:0,-644.921,-5692.69	0/0:1469:1464,3:1464:51636:3:83:0,-434.967,-3851.74	0/1:142:72,70:72:2535:70:1886:-108.75,0,-143.015	0/1:111:69,41:69:2433:41:1104:-55.4606,0,-145.171	0/1:313:140,172:140:4912:172:4690:-283.155,0,-271.998	0/1:719:359,357:359:12625:357:9735:-566.09,0,-703.166	0/1:78:46,32:46:1589:32:878:-47.6671,0,-93.9948	0/1:195:98,96:98:3446:96:2603:-151,0,-194.879	0/0:110:110,0:110:3884:0:0:0,-33.1133,-282.892	0/0:36:36,0:36:1274:0:0:0,-10.8371,-93.3863	0/0:54:54,0:54:1901:0:0:0,-16.2556,-136.717	0/0:107:107,0:107:3738:0:0:0,-32.2102,-271.848	0/0:120:120,0:120:4200:0:0:0,-36.1236,-316.6	0/1:112:63,49:63:2203:49:1324:-72.6995,0,-126.638	0/0:108:108,0:108:3766:0:0:0,-32.5112,-277.294	0/1:109:54,54:54:1931:54:1443:-82.9797,0,-107.289	0/1:36:16,20:16:568:20:538:-32.4114,0,-29.6566	0/0:1170:1169,0:1169:41280:0:0:0,-351.904,-3006	0/0:118:117,1:117:4124:1:27:0,-33.1221,-305.501	0/0:60:59,0:59:2090:0:0:0,-17.7608,-150.959	0/0:778:773,4:773:27185:4:114:0,-224.727,-2026.82	0/0:112:112,0:112:3951:0:0:0,-33.7154,-287.006	0/0:52:52,0:52:1807:0:0:0,-15.6536,-132.779	0/0:934:930,2:930:32787:2:55:0,-276.167,-2376.29	0/1:661:321,340:321:11328:340:9226:-540.995,0,-622.849	0/0:48:48,0:48:1696:0:0:0,-14.4494,-123.57	0/0:98:98,0:98:3404:0:0:0,-29.5009,-252.001	0/1:717:333,384:333:11792:384:10358:-614.358,0,-642.337	0/0:88:88,0:88:3124:0:0:0,-26.4906,-224.174	0/1:203:93,109:93:3309:109:2991:-178.54,0,-178.701	0/0:50:50,0:50:1758:0:0:0,-15.0515,-129.461	0/0:82:82,0:82:2897:0:0:0,-24.6845,-210.133	0/0:158:158,0:158:5569:0:0:0,-47.5627,-402.88	0/1:186:45,140:45:1592:140:3801:-248.85,0,-56.1612	0/0:444:443,1:443:15560:1:27:0,-131.258,-1136.28	0/1:29:20,9:20:701:9:252:-12.0375,0,-44.1732	0/0:34:33,1:33:1146:1:28:0,-7.73571,-81.153	0/0:826:821,3:821:28956:3:81:0,-241.589,-2097.35	0/1:95:37,58:37:1275:58:1561:-96.4409,0,-66.943	0/1:62:35,27:35:1206:27:727:-39.701,0,-72.5402	0/0:152:152,0:152:5362:0:0:0,-45.7566,-392.011	0/1:131:67,64:67:2383:64:1728:-99.2814,0,-134.039	0/1:168:67,101:67:2399:101:2734:-168.944,0,-128.174	0/1:81:50,27:50:1744:27:746:-37.1878,0,-108.381	0/0:991:986,2:986:34763:2:56:0,-292.929,-2589.2	0/1:91:54,37:54:1916:37:999:-52.7463,0,-113.048	0/1:58:24,34:24:840:34:920:-56.8367,0,-46.0121	0/1:154:61,92:61:2125:92:2513:-156.533,0,-109.372	0/1:43:28,15:28:981:15:404:-19.5971,0,-59.5655	0/1:74:34,40:34:1194:40:1063:-62.8101,0,-65.671	0/0:34:34,0:34:1189:0:0:0,-10.235,-85.9485	0/1:107:57,50:57:1992:50:1375:-79.0669,0,-110.041	0/1:23:7,16:7:241:16:432:-27.8677,0,-11.4789	0/0:69:68,0:68:2284:0:0:0,-20.47,-173.826	0/0:83:82,0:82:2886:0:0:0,-24.6845,-215.257	0/1:476:223,253:223:7865:253:6844:-405.561,0,-429.988	0/1:1014:511,501:511:17981:501:13588:-784.334,0,-1008.44	0/1:76:24,52:24:860:52:1396:-88.9336,0,-40.0246	0/0:5:5,0:5:169:0:0:0,-1.50515,-12.9444	0/0:90:90,0:90:3182:0:0:0,-27.0927,-231.156
chr01	33533724	.	A	G	42804.6	PASS	AB=0.503748;ABP=3.64509;AC=44;AF=0.234043;AN=188;AO=2637;CIGAR=1X;DP=10991;DPB=10991;DPRA=1.08813;EPP=5729.18;EPPR=18139.1;GTI=0;LEN=1;MEANALT=1.01887;MQM=44.9989;MQMR=58.6791;NS=94;NUMALT=1;ODDS=1.06989;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94167;QR=294435;RO=8352;RPL=0;RPP=5729.18;RPPR=18139.1;RPR=2637;RUN=1;SAF=2637;SAP=5729.18;SAR=0;SRF=8352;SRP=18139.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:34,29:34:1216:29:1040:-73.5983,0,-90.6843	0/1:116:45,71:45:1543:71:2533:-189.773,0,-104.221	0/0:93:93,0:93:3275:0:0:0,-27.9958,-294.937	0/0:159:159,0:159:5659:0:0:0,-47.8638,-509.009	0/1:50:16,34:16:568:34:1201:-91.3187,0,-36.3985	0/1:57:37,20:37:1324:20:686:-43.9121,0,-102.265	0/1:138:71,67:71:2510:67:2392:-170.764,0,-184.402	0/0:151:151,0:151:5280:0:0:0,-45.4555,-474.715	0/1:139:73,66:73:2585:66:2356:-167.678,0,-191.003	0/0:124:124,0:124:4348:0:0:0,-37.3277,-390.98	0/0:110:109,1:109:3851:1:36:0,-29.515,-342.944	0/0:176:176,0:176:6256:0:0:0,-52.9813,-562.993	0/0:147:147,0:147:5169:0:0:0,-44.2514,-465.239	0/1:135:72,63:72:2557:63:2260:-157.935,0,-189.457	0/0:143:142,1:142:5073:1:36:0,-39.4988,-452.804	0/0:131:131,0:131:4613:0:0:0,-39.4349,-415.203	0/0:66:66,0:66:2334:0:0:0,-19.868,-210.206	0/0:109:109,0:109:3750:0:0:0,-32.8123,-337.628	0/1:68:43,25:43:1461:25:896:-59.0511,0,-110.879	0/1:336:127,209:127:4537:209:7462:-558.218,0,-307.189	0/1:219:106,113:106:3696:113:4020:-288.289,0,-265.888	0/1:123:45,78:45:1600:78:2804:-209.671,0,-107.115	0/0:140:140,0:140:4915:0:0:0,-42.1442,-442.184	0/0:73:68,5:68:2398:5:176:0,-6.44664,-200.214	0/0:89:89,0:89:3158:0:0:0,-26.7917,-283.95	0/0:242:242,0:242:8414:0:0:0,-72.8493,-755.531	0/0:354:354,0:354:12501:0:0:0,-106.565,-1124.43	0/0:72:72,0:72:2553:0:0:0,-21.6742,-229.881	0/0:248:245,3:245:8689:3:108:0,-64.7427,-770.811	0/0:95:95,0:95:3283:0:0:0,-28.5978,-295.493	0/0:106:106,0:106:3663:0:0:0,-31.9092,-329.751	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/1:25:9,16:9:316:16:576:-43.5343,0,-21.2531	0/1:7:1,6:1:36:6:216:-17.0665,0,-1.49106	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:20:20,0:20:701:0:0:0,-6.0206,-63.4117	0/1:277:160,117:160:5701:117:4178:-285.511,0,-428.952	0/1:95:55,40:55:1852:40:1436:-98.0676,0,-138.347	0/1:75:41,34:41:1404:34:1205:-85.0822,0,-104.034	0/1:8:3,5:3:108:5:180:-13.9149,0,-7.66693	0/1:163:84,79:84:2933:79:2825:-199.353,0,-214.361	0/1:65:43,22:43:1498:22:792:-50.6108,0,-115.398	0/0:168:168,0:168:5953:0:0:0,-50.573,-535.433	0/0:100:100,0:100:3542:0:0:0,-30.103,-318.85	0/0:92:92,0:92:3183:0:0:0,-27.6948,-286.518	0/0:95:94,1:94:3340:1:36:0,-25.0617,-296.606	0/0:59:59,0:59:2108:0:0:0,-17.7608,-189.989	0/1:199:95,104:95:3310:104:3720:-269.504,0,-237.987	0/0:109:108,1:108:3856:1:36:0,-29.2638,-343.544	0/1:119:79,40:79:2742:40:1436:-91.5442,0,-211.006	0/1:138:70,68:70:2512:68:2425:-172.101,0,-184.594	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.4573	0/1:143:81,62:81:2730:62:2217:-154.214,0,-202.785	0/0:134:134,0:134:4785:0:0:0,-40.338,-430.512	0/1:7:6,1:6:201:1:36:-1.45141,0,-16.3098	0/0:188:188,0:188:6638:0:0:0,-56.5936,-597.231	0/0:55:55,0:55:1964:0:0:0,-16.5566,-176.748	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4192	0/1:10:7,3:7:252:3:108:-6.89084,0,-19.9563	0/0:126:124,2:124:4350:2:72:0,-31.1876,-384.647	0/0:153:153,0:153:5480:0:0:0,-46.0576,-493.13	0/1:12:8,4:8:288:4:144:-9.51715,0,-22.6068	0/0:226:226,0:226:8002:0:0:0,-68.0328,-718.606	0/1:161:98,63:98:3504:63:2252:-151.698,0,-266.805	0/0:85:85,0:85:2964:0:0:0,-25.5875,-266.409	0/0:105:105,0:105:3723:0:0:0,-31.6081,-335.106	0/0:199:199,0:199:7002:0:0:0,-59.905,-629.829	0/1:184:59,125:59:2097:125:4461:-339.559,0,-133.456	0/0:85:85,0:85:2972:0:0:0,-25.5875,-267.348	0/1:56:33,23:33:1154:23:824:-56.8219,0,-87.1971	0/0:76:76,0:76:2701:0:0:0,-22.8783,-243.209	0/0:25:25,0:25:885:0:0:0,-7.52575,-79.8874	0/1:117:67,50:67:2373:50:1780:-123.201,0,-178.399	0/1:96:47,49:47:1650:49:1748:-125.467,0,-118.485	0/0:174:174,0:174:6210:0:0:0,-52.3792,-558.786	0/1:170:61,107:61:2154:107:3819:-286.114,0,-143.128	0/1:149:57,92:57:1987:92:3289:-247.488,0,-134.163	0/1:140:69,71:69:2371:71:2552:-184.887,0,-171.062	0/0:12:12,0:12:409:0:0:0,-3.61236,-37.0274	0/1:130:58,72:58:1982:72:2580:-188.883,0,-138.067	0/1:123:54,69:54:1871:69:2457:-181.205,0,-131.507	0/1:309:156,153:156:5572:153:5462:-388.449,0,-406.498	0/1:77:42,35:42:1462:35:1252:-87.207,0,-107.958	0/1:105:53,52:53:1889:52:1860:-132.298,0,-138.434	0/0:116:116,0:116:4031:0:0:0,-34.9195,-362.552	0/1:171:109,62:109:3878:62:2197:-142.779,0,-297.474	0/1:30:17,13:17:596:13:464:-32.2251,0,-44.8291	0/0:93:93,0:93:3260:0:0:0,-27.9958,-293.476	0/0:114:114,0:114:4057:0:0:0,-34.3174,-364.8	0/1:99:50,49:50:1781:49:1738:-122.769,0,-130.751	0/1:164:85,79:85:3037:79:2812:-200.348,0,-223.95	0/1:135:54,81:54:1891:81:2904:-215.222,0,-129.371	0/0:163:162,1:162:5720:1:36:0,-45.4696,-510.982	0/0:154:153,1:153:5476:1:36:0,-42.8101,-489.258
chr01	33533770	.	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chr01	33773985	.	T	C	36387.8	PASS	AB=0.493731;ABP=4.50761;AC=45;AF=0.239362;AN=188;AO=2176;CIGAR=1X;DP=10019;DPB=10019;DPRA=0.97507;EPP=4728.13;EPPR=17029.5;GTI=2;LEN=1;MEANALT=1.01961;MQM=59.9481;MQMR=59.9759;NS=94;NUMALT=1;ODDS=4.43625;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77806;QR=280466;RO=7841;RPL=0;RPP=4728.13;RPPR=17029.5;RPR=2176;RUN=1;SAF=2176;SAP=4728.13;SAR=0;SRF=7841;SRP=17029.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:70:31,39:31:1108:39:1388:-104.147,0,-78.9589	0/1:79:42,37:42:1500:37:1328:-96.0409,0,-111.513	0/0:135:135,0:135:4824:0:0:0,-40.639,-434.316	0/0:228:228,0:228:8136:0:0:0,-68.6348,-732.259	0/1:41:23,18:23:812:18:648:-46.3097,0,-61.0587	0/1:50:30,20:30:1072:20:701:-48.3611,0,-81.741	0/1:201:84,117:84:3016:117:4188:-316.593,0,-211.163	0/0:200:200,0:200:7168:0:0:0,-60.206,-645.167	0/1:115:47,68:47:1680:68:2428:-184.158,0,-116.869	0/1:85:36,49:36:1292:49:1748:-132.017,0,-90.9962	0/0:88:88,0:88:3164:0:0:0,-26.4906,-284.984	0/0:123:123,0:123:4399:0:0:0,-37.0267,-395.146	0/0:84:84,0:84:3016:0:0:0,-25.2865,-271.67	0/1:61:37,24:37:1328:24:860:-59.359,0,-101.459	0/0:85:85,0:85:3056:0:0:0,-25.5875,-275.268	0/0:78:78,0:78:2796:0:0:0,-23.4803,-251.88	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:46:46,0:46:1643:0:0:0,-13.8474,-148.158	0/1:45:23,22:23:824:22:788:-57.6984,0,-60.937	0/1:172:88,84:88:3160:84:3000:-218.455,0,-232.847	0/1:174:106,68:106:3773:68:2432:-166.756,0,-287.162	0/0:97:97,0:97:3472:0:0:0,-29.1999,-312.692	0/0:185:184,1:184:6569:1:36:0,-52.0923,-587.694	0/1:66:58,7:58:2076:7:252:-3.23329,0,-167.323	0/0:110:110,0:110:3944:0:0:0,-33.1133,-355.151	0/0:290:290,0:290:10384:0:0:0,-87.2987,-934.481	0/0:331:330,1:330:11816:1:36:0,-96.0426,-1059.7	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:307:307,0:307:10984:0:0:0,-92.4162,-988.456	0/0:197:194,3:194:6956:3:108:0,-49.2277,-616.029	0/0:130:130,0:130:4644:0:0:0,-39.1339,-418.124	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:24:9,15:9:324:15:540:-41.7118,0,-22.2811	0/1:7:4,3:4:140:3:108:-7.96796,0,-10.8374	0/0:30:29,1:29:1036:1:36:0,-5.43262,-89.9556	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:231:231,0:231:8259:0:0:0,-69.5379,-743.321	0/1:154:81,73:81:2904:73:2620:-189.689,0,-215.237	0/1:66:30,36:30:1076:36:1292:-96.7158,0,-77.2849	0/1:5:4,1:4:140:1:36:-2.09312,0,-11.4394	0/1:193:111,82:111:3984:82:2928:-205.656,0,-300.65	0/1:40:15,25:15:536:25:900:-69.2798,0,-36.5336	0/0:194:194,0:194:6944:0:0:0,-58.3998,-625.026	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/1:55:29,26:29:1024:26:916:-66.1998,0,-75.9159	0/1:118:57,61:57:2032:61:2184:-161.304,0,-147.631	0/0:171:171,0:171:6116:0:0:0,-51.4761,-550.541	0/1:177:107,70:107:3823:70:2512:-173.05,0,-290.985	0/0:122:122,0:122:4344:0:0:0,-36.7257,-391.138	0/1:135:52,83:52:1872:83:2984:-228.152,0,-128.12	0/1:110:56,54:56:2000:54:1920:-139.962,0,-147.16	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:83:39,44:39:1400:44:1572:-116.786,0,-101.314	0/0:95:94,0:94:3364:0:0:0,-28.2968,-302.617	0/0:8:8,0:8:280:0:0:0,-2.40824,-25.5393	0/0:204:204,0:204:7296:0:0:0,-61.4101,-656.605	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:20:14,6:14:500:6:216:-13.7699,0,-39.3156	0/0:112:112,0:112:3989:0:0:0,-33.7154,-359.2	0/0:116:116,0:116:4131:0:0:0,-34.9195,-371.976	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/0:123:123,0:123:4416:0:0:0,-37.0267,-397.611	0/1:172:84,88:84:2989:88:3111:-228.413,0,-217.464	0/0:73:73,0:73:2609:0:0:0,-21.9752,-235.056	0/0:129:129,0:129:4596:0:0:0,-38.8329,-413.798	0/0:172:169,3:169:6028:3:108:0,-41.702,-531.995	0/1:170:68,102:68:2432:102:3652:-277.709,0,-167.961	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/1:43:18,25:18:644:25:896:-68.0161,0,-45.3463	0/0:58:58,0:58:2068:0:0:0,-17.4597,-186.391	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:182:97,85:97:3461:85:3033:-218.4,0,-256.914	0/1:100:47,53:47:1680:53:1900:-141.167,0,-121.384	0/0:176:176,0:176:6269:0:0:0,-52.9813,-564.306	0/1:153:57,96:57:2036:96:3444:-264.11,0,-137.455	0/1:101:69,32:69:2468:32:1148:-72.2869,0,-191.97	0/1:117:63,54:63:2260:54:1936:-139.296,0,-168.434	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:99:55,44:55:1972:44:1565:-111.338,0,-147.953	0/1:104:59,45:59:2124:45:1602:-113.163,0,-160.121	0/1:187:107,80:107:3820:80:2864:-201.705,0,-287.706	0/1:58:24,34:24:864:34:1220:-92.6471,0,-60.6228	0/0:109:109,0:109:3920:0:0:0,-32.8123,-352.991	0/1:64:35,29:35:1244:29:1036:-74.2874,0,-92.9987	0/1:162:83,79:83:2960:79:2836:-206.705,0,-217.867	0/1:35:18,17:18:635:17:603:-44.0635,0,-46.9409	0/0:71:70,1:70:2504:1:36:0,-17.7749,-222.014	0/0:94:94,0:94:3356:0:0:0,-28.2968,-302.257	0/1:71:29,42:29:1036:42:1495:-113.471,0,-72.1808	0/1:128:58,70:58:2076:70:2492:-186.002,0,-148.579	0/1:88:33,55:33:1188:55:1980:-151.984,0,-80.738	0/0:135:135,0:135:4832:0:0:0,-40.639,-434.478	0/0:139:139,0:139:4965:0:0:0,-41.8432,-446.998
chr01	33774015	.	GCTAG	TCTAC,ACTAC	216896	PASS	AB=0.504041,0.492142;ABP=3.64214,5.39921;AC=143,45;AF=0.760638,0.239362;AN=188;AO=7918,2205;CIGAR=1X3M1X,1X3M1X;DP=10169;DPB=10169.4;DPRA=0,1.02861;EPP=17127.3,4773.75;EPPR=0;GTI=2;LEN=5,5;MEANALT=2,2.33962;MQM=59.9861,59.9342;MQMR=0;NS=94;NUMALT=2;ODDS=4.37129;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=72,0;PQR=0;PRO=0;QA=279855,77732;QR=0;RO=0;RPL=7909,2203;RPP=17118.6,4773.75;RPPR=0;RPR=9,2;RUN=1,1;SAF=7917,2205;SAP=17188,4791.11;SAR=1,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:74:0,33,41:0:0:33,41:1159,1429:-210.894,-116.562,-106.628,-94.6817,0,-82.3395	1/2:81:0,43,37:0:0:43,37:1511,1301:-228.879,-105.894,-92.9493,-122.977,0,-111.839	1/1:139:0,138,0:0:0:138,0:4857,0:-436.94,-41.5421,0,-436.94,-41.5421,-436.94	1/1:233:0,230,0:0:0:230,0:8152,0:-733.361,-69.2369,0,-733.361,-69.2369,-733.361	1/2:41:0,23,18:0:0:23,18:801,626:-116.383,-51.2461,-44.3224,-65.4847,0,-60.0662	1/2:51:0,30,21:0:0:30,21:1050,740:-146.027,-60.6,-51.5691,-85.7784,0,-79.4567	1/2:205:0,84,121:0:0:84,121:2973,4247:-588.153,-345.988,-320.702,-242.517,0,-206.093	1/1:205:0,203,0:0:0:203,0:7151,0:-643.393,-61.1091,0,-643.393,-61.1091,-643.393	1/2:118:0,49,69:0:0:49,69:1722,2439:-339.157,-198.995,-184.244,-140.514,0,-119.743	1/2:85:0,36,49:0:0:36,49:1291,1704:-244.195,-138.892,-128.055,-105.657,0,-90.9064	1/1:89:0,89,0:0:0:89,0:3160,0:-284.627,-26.7917,0,-284.627,-26.7917,-284.627	1/1:127:0,125,0:0:0:125,0:4381,0:-394.189,-37.6288,0,-394.189,-37.6288,-394.189	1/1:85:0,85,0:0:0:85,0:3011,0:-271.223,-25.5876,0,-271.223,-25.5876,-271.223	1/2:64:0,38,26:0:0:38,26:1350,903:-183.679,-73.6682,-62.2291,-110.361,0,-102.534	1/1:86:0,86,0:0:0:86,0:3076,0:-277.069,-25.8886,0,-277.069,-25.8886,-277.069	1/1:79:0,78,0:0:0:78,0:2771,0:-249.273,-23.4803,0,-249.273,-23.4803,-249.273	1/1:31:0,31,0:0:0:31,0:1103,0:-99.581,-9.33193,0,-99.581,-9.33193,-99.581	1/1:48:0,48,0:0:0:48,0:1691,0:-152.115,-14.4494,0,-152.115,-14.4494,-152.115	1/2:45:0,23,22:0:0:23,22:820,791:-131.733,-64.8929,-57.9692,-67.1983,0,-60.5756	1/2:178:0,93,85:0:0:93,85:3300,3011:-514.507,-245.636,-217.64,-269.226,0,-243.638	1/2:174:0,106,68:0:0:106,68:3764,2392:-501.768,-195.069,-163.159,-307.052,0,-286.582	1/1:99:0,99,0:0:0:99,0:3516,0:-316.653,-29.802,0,-316.653,-29.802,-316.653	1/1:186:0,184,1:0:0:184,1:6526,36:-587.097,-55.3895,0,-584.159,-52.4272,-583.858	1/2:66:0,59,7:0:0:59,7:2086,245:-190.173,-20.2833,-2.52248,-170.24,0,-168.133	1/1:113:0,112,0:0:0:112,0:3968,0:-356.955,-33.7154,0,-356.955,-33.7154,-356.955	1/1:290:0,290,0:0:0:290,0:10242,0:-921.725,-87.2987,0,-921.725,-87.2987,-921.725	1/1:338:0,337,1:0:0:337,1:11937,36:-1073.84,-101.447,0,-1070.9,-98.1499,-1070.6	1/1:43:0,41,0:0:0:41,0:1461,0:-131.431,-12.3422,0,-131.431,-12.3422,-131.431	1/1:311:0,310,0:0:0:310,0:10995,0:-989.107,-93.3193,0,-989.107,-93.3193,-989.107	1/1:199:0,195,4:0:0:195,4:6916,144:-622.155,-58.7009,0,-610.405,-46.5914,-609.201	1/1:130:0,130,0:0:0:130,0:4603,0:-414.44,-39.1339,0,-414.44,-39.1339,-414.44	1/1:17:0,17,0:0:0:17,0:601,0:-54.4196,-5.11751,0,-54.4196,-5.11751,-54.4196	1/2:24:0,9,15:0:0:9,15:324,535:-70.4072,-43.9692,-41.26,-26.7966,0,-22.2811	1/2:7:0,4,3:0:0:4,3:141,104:-20.2835,-8.79971,-7.59559,-11.8328,0,-10.9297	1/1:30:0,29,1:0:0:29,1:1017,33:-91.5097,-8.72987,0,-88.8422,-5.73177,-88.5412	1/1:10:0,10,0:0:0:10,0:345,0:-31.3811,-3.0103,0,-31.3811,-3.0103,-31.3811	1/1:235:0,234,0:0:0:234,0:8289,0:-745.671,-70.441,0,-745.671,-70.441,-745.671	1/2:156:0,82,74:0:0:82,74:2902,2610:-449.25,-212.872,-188.187,-236.732,0,-214.455	1/2:67:0,30,37:0:0:30,37:1073,1299:-193.569,-106.071,-97.0406,-87.8517,0,-76.7136	1/2:5:0,4,1:0:0:4,1:142,36:-14.8635,-3.29724,-2.09312,-11.9251,0,-11.6241	1/2:201:0,117,84:0:0:117,84:4131,2982:-579.732,-243.328,-208.108,-336.758,0,-311.471	1/2:41:0,14,26:0:0:14,26:503,933:-117.137,-76.1027,-71.8883,-41.0335,0,-33.2067	1/1:195:0,194,0:0:0:194,0:6851,0:-616.309,-58.3998,0,-616.309,-58.3998,-616.309	1/1:77:0,77,0:0:0:77,0:2732,0:-246.124,-23.1793,0,-246.124,-23.1793,-246.124	1/2:55:0,29,25:0:0:29,25:1007,869:-152.592,-70.7269,-61.9971,-81.9379,0,-74.4121	1/2:119:0,57,62:0:0:57,62:1998,2193:-341.554,-178.972,-161.813,-162.934,0,-144.27	1/1:174:0,172,0:0:0:172,0:6066,0:-545.69,-51.7772,0,-545.69,-51.7772,-545.69	1/2:179:0,108,71:0:0:108,71:3810,2513:-515.288,-205.051,-172.539,-310.591,0,-289.218	1/1:123:0,122,0:0:0:122,0:4322,0:-388.899,-36.7257,0,-388.899,-36.7257,-388.899	1/2:136:0,52,84:0:0:52,84:1865,2997:-396.793,-244.675,-229.022,-152.476,0,-127.189	1/2:113:0,59,54:0:0:59,54:2092,1928:-327.975,-157.541,-139.78,-170.79,0,-154.534	1/1:5:0,5,0:0:0:5,0:177,0:-16.2769,-1.50515,0,-16.2769,-1.50515,-16.2769	1/2:83:0,39,44:0:0:39,44:1369,1535:-236.611,-125.194,-113.454,-111.767,0,-98.5215	1/1:95:0,95,0:0:0:95,0:3361,0:-302.708,-28.5979,0,-302.708,-28.5979,-302.708	1/1:8:0,8,0:0:0:8,0:281,0:-25.6308,-2.40824,0,-25.6308,-2.40824,-25.6308	1/1:211:0,209,0:0:0:209,0:7281,0:-655.046,-62.9153,0,-655.046,-62.9153,-655.046	1/1:77:0,77,0:0:0:77,0:2714,0:-24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chr01	33805213	.	C	T	155941	PASS	AB=0.344837;ABP=1523.92;AC=143;AF=0.760638;AN=188;AO=7843;CIGAR=1X;DP=12628;DPB=12628;DPRA=0;EPP=17033.9;EPPR=9999.8;GTI=9;LEN=1;MEANALT=1.03191;MQM=59.8828;MQMR=52.3122;NS=94;NUMALT=1;ODDS=0.355707;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=279255;QR=169771;RO=4782;RPL=3;RPP=17007.8;RPPR=5.91649;RPR=7840;RUN=1;SAF=3;SAP=17007.8;SAR=7840;SRF=2476;SRP=16.1336;SRR=2306;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:27,27:27:944:27:956:-70.1001,0,-68.0054	0/1:242:149,93:149:5320:93:3300:-224.361,0,-399.814	1/1:356:0,356:0:0:356:12724:-1144.97,-107.167,0	1/1:241:0,241:0:0:241:8573:-771.551,-72.5482,0	0/1:124:74,50:74:2636:50:1756:-120.993,0,-198.719	0/1:56:43,13:43:1516:13:468:-25.602,0,-117.651	0/1:274:158,116:158:5610:116:4151:-291.062,0,-419.538	1/1:135:0,135:0:0:135:4832:-435.03,-40.6391,0	0/1:185:111,74:111:3952:74:2648:-180.42,0,-294.831	0/1:183:110,73:110:3908:73:2606:-179.653,0,-292.961	1/1:64:0,64:0:0:64:2268:-204.383,-19.2659,0	1/1:83:0,83:0:0:83:2984:-268.756,-24.9855,0	1/1:87:0,87:0:0:87:3112:-280.275,-26.1896,0	0/1:129:92,37:92:3222:37:1311:-79.458,0,-247.306	1/1:81:1,80:1:36:80:2855:-253.589,-20.7852,0	1/1:69:1,68:1:36:68:2417:-214.187,-17.1728,0	1/1:71:0,71:0:0:71:2512:-226.334,-21.3731,0	1/1:69:0,69:0:0:69:2464:-221.979,-20.7711,0	0/1:74:52,22:52:1856:22:784:-48.6077,0,-142.851	0/1:480:337,143:337:12003:143:5106:-315.148,0,-924.29	0/1:209:145,63:145:5097:63:2213:-136.415,0,-391.861	1/1:133:1,132:1:32:132:4682:-416.276,-36.8377,0	1/1:65:0,65:0:0:65:2312:-208.341,-19.567,0	1/1:102:5,97:5:176:97:3460:-295.52,-14.6116,0	1/1:57:0,57:0:0:57:2048:-184.592,-17.1587,0	1/1:336:0,336:0:0:336:11953:-1075.59,-101.146,0	1/1:292:1,291:1:32:291:10378:-930.767,-84.722,0	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	1/1:390:1,389:1:36:389:13822:-1240.17,-113.823,0	1/1:83:1,82:1:36:82:2885:-256.289,-21.3872,0	1/1:117:0,117:0:0:117:4162:-374.764,-35.2205,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:32:14,18:14:491:18:635:-47.844,0,-34.7527	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.2667	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:184:0,184:0:0:184:6535:-588.191,-55.3895,0	0/1:260:178,82:178:6306:82:2903:-183.239,0,-484.523	0/1:105:68,37:68:2420:37:1332:-88.5742,0,-183.24	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.3185	0/1:240:167,73:167:5937:73:2620:-163.8,0,-456.905	0/1:60:37,23:37:1320:23:824:-56.4215,0,-99.5315	1/1:163:0,163:0:0:163:5802:-522.298,-49.0679,0	1/1:77:0,77:0:0:77:2747:-247.416,-23.1793,0	0/1:119:85,34:85:2992:34:1211:-73.4729,0,-230.801	0/1:99:67,32:67:2396:32:1144:-73.4676,0,-184.3	1/1:125:0,125:0:0:125:4464:-401.931,-37.6288,0	0/1:267:159,108:159:5600:108:3841:-265.512,0,-421.181	1/1:78:0,78:0:0:78:2769:-249.452,-23.4803,0	0/1:298:202,96:202:7177:96:3427:-218.079,0,-552.443	0/1:260:175,85:175:6192:85:3011:-192.924,0,-477.159	1/1:20:0,20:0:0:20:715:-64.6773,-6.0206,0	0/1:264:185,79:185:6550:79:2832:-175.647,0,-501.144	1/1:40:0,40:0:0:40:1416:-127.737,-12.0412,0	1/1:13:0,13:0:0:13:456:-41.3732,-3.91339,0	1/1:169:0,169:0:0:169:6043:-543.966,-50.8741,0	1/1:50:0,50:0:0:50:1772:-159.763,-15.0515,0	1/1:25:0,25:0:0:25:880:-79.5177,-7.52575,0	0/1:21:13,8:13:450:8:279:-19.1259,0,-34.3404	1/1:58:0,58:0:0:58:2055:-185.199,-17.4597,0	1/1:97:1,96:1:36:96:3384:-300.847,-25.6331,0	0/1:34:18,16:18:644:16:572:-41.5784,0,-47.9535	1/1:243:0,243:0:0:243:8648:-778.23,-73.1503,0	0/1:252:149,103:149:5280:103:3692:-256.294,0,-394.872	1/1:71:0,71:0:0:71:2532:-228.13,-21.3731,0	1/1:119:0,119:0:0:119:4255:-383.129,-35.8226,0	1/1:176:5,171:5:176:171:6070:-530.27,-36.8542,0	0/1:156:133,23:133:4710:23:828:-27.8834,0,-373.183	0/1:29:3,26:3:108:26:915:-73.9132,0,-1.29886	0/1:107:72,35:72:2524:35:1248:-80.4147,0,-191.539	1/1:97:2,95:2:72:95:3370:-296.677,-22.3632,0	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	0/1:136:89,47:89:3173:47:1676:-110.187,0,-239.399	0/1:72:47,25:47:1684:25:896:-59.2862,0,-128.81	1/1:126:1,125:1:36:125:4425:-394.877,-34.3813,0	0/1:310:194,115:194:6903:115:4080:-274.097,0,-523.856	0/1:265:181,84:181:6432:84:2984:-189.003,0,-493.382	0/1:199:105,94:105:3740:94:3352:-241.993,0,-274.339	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	0/1:268:160,108:160:5686:108:3844:-265.457,0,-427.629	0/1:241:147,94:147:5232:94:3360:-230.069,0,-395.43	0/1:324:251,73:251:8965:73:2612:-137.794,0,-702.121	0/1:134:89,45:89:3153:45:1582:-102.331,0,-241.435	1/1:59:0,59:0:0:59:2111:-190.258,-17.7608,0	0/1:140:92,48:92:3258:48:1699:-111.047,0,-249.74	0/1:186:112,74:112:4003:74:2622:-180.236,0,-299.901	0/1:47:35,12:35:1232:12:424:-24.348,0,-95.0342	1/1:57:0,57:0:0:57:2044:-184.228,-17.1587,0	1/1:64:0,64:0:0:64:2280:-205.427,-19.2659,0	0/1:93:57,35:57:2027:35:1239:-83.7592,0,-152.499	0/1:125:86,39:86:3047:39:1400:-88.6613,0,-232.256	0/1:103:84,19:84:3011:19:680:-30.5231,0,-238.61	1/1:156:0,156:0:0:156:5533:-497.953,-46.9607,0	1/1:113:0,113:0:0:113:4039:-363.696,-34.0164,0
chr01	33805228	.	TGG	GGG,CGG	289493	PASS	AB=0.321818,0.67026;ABP=2126.41,1941.79;AC=143,45;AF=0.760638,0.239362;AN=188;AO=7672,5182;CIGAR=1X2M,1X2M;DP=12961;DPB=12961.7;DPRA=0,1.99719;EPP=16653.9,11255.6;EPPR=57.2971;GTI=10;LEN=1,1;MEANALT=2.29787,2.90909;MQM=59.8919,53.0318;MQMR=57.2;NS=94;NUMALT=2;ODDS=28042;PAIRED=0,0;PAIREDR=0;PAO=0.5,1;PQA=0,32;PQR=0;PRO=0;QA=263825,183694;QR=718;RO=25;RPL=0,2440;RPP=16662.5,41.2285;RPPR=28.1125;RPR=7672,2742;RUN=1,1;SAF=1,2440;SAP=16653.9,41.2285;SAR=7671,2742;SRF=4;SRP=28.1125;SRR=21;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:56:0,25,31:0:0:25,31:845,1087:-156.37,-87.8807,-80.355,-68.8314,0,-59.4995	1/2:264:0,97,165:0:0:97,165:3363,5866:-745.234,-472.165,-442.965,-273.111,0,-223.441	1/1:333:1,329,0:1:22:329,0:11349,0:-1019.01,-97.3933,0,-1019.31,-99.0389,-1020.99	1/1:233:0,231,0:0:0:231,0:7938,0:-714.123,-69.5379,0,-714.123,-69.5379,-714.123	1/2:128:0,50,77:0:0:50,77:1704,2707:-357.557,-219.315,-204.263,-138.353,0,-115.174	1/2:59:0,14,44:0:0:14,44:481,1580:-165.676,-126.622,-122.407,-39.0419,0,-25.7966	1/2:292:2,110,179:2:49:110,179:3781,6356:-818.242,-511.836,-482.529,-303.299,0,-253.221	1/1:134:1,132,0:1:28:132,0:4607,0:-411.954,-37.5572,0,-412.255,-39.736,-414.474	1/2:203:0,77,125:0:0:77,125:2569,4422:-563.326,-355.617,-332.437,-207.778,0,-170.149	1/2:191:0,68,121:0:0:68,121:2356,4294:-539.135,-347.659,-327.189,-191.498,0,-155.074	1/1:65:0,64,0:0:0:64,0:2192,0:-197.309,-19.2659,0,-197.309,-19.2659,-197.309	1/1:76:0,75,0:0:0:75,0:2596,0:-233.621,-22.5773,0,-233.621,-22.5773,-233.621	1/1:85:0,85,0:0:0:85,0:2820,0:-254.036,-25.5876,0,-254.036,-25.5876,-254.036	1/2:136:0,37,97:0:0:37,97:1280,3418:-379.082,-275.069,-263.931,-104.019,0,-74.8193	1/1:71:1,70,0:1:27:70,0:2343,0:-208.426,-18.6733,0,-208.727,-21.0721,-210.855	1/1:70:2,68,0:2:57:68,0:2268,0:-198.965,-15.6588,0,-199.567,-20.47,-204.092	1/1:72:0,72,0:0:0:72,0:2464,0:-222.014,-21.6742,0,-222.014,-21.6742,-222.014	1/1:68:0,67,0:0:0:67,0:2246,0:-202.115,-20.169,0,-202.115,-20.169,-202.115	1/2:80:0,24,56:0:0:24,56:816,1991:-226.555,-160.372,-153.147,-66.5263,0,-49.6687	1/2:506:1,139,363:1:21:139,363:4780,12827:-1422.95,-1035.13,-994.872,-386.575,0,-278.89	1/2:224:1,63,159:1:36:63,159:2164,5640:-628.419,-453.009,-436.982,-172.813,0,-127.887	1/1:128:2,125,1:2:72:125,1:4367,36:-388.479,-33.8658,0,-386.144,-34.6536,-389.68	1/1:66:0,66,0:0:0:66,0:2307,0:-207.89,-19.868,0,-207.89,-19.868,-207.89	1/1:98:0,92,6:0:0:92,6:3196,216:-287.505,-27.6948,0,-269.97,-9.80165,-268.163	1/1:52:0,52,0:0:0:52,0:1783,0:-160.749,-15.6536,0,-160.749,-15.6536,-160.749	1/1:328:1,326,1:1:21:326,1:11191,36:-1004.92,-96.6218,0,-1002.29,-95.1234,-1003.57	1/1:281:0,278,1:0:0:278,1:9606,36:-864.095,-83.6863,0,-861.202,-80.7954,-860.901	1/1:47:0,47,0:0:0:47,0:1595,0:-143.833,-14.1484,0,-143.833,-14.1484,-143.833	1/1:378:3,370,2:3:93:370,2:12676,72:-1132.03,-103.918,0,-1127.07,-105.508,-1133.93	1/1:83:0,82,1:0:0:82,1:2858,36:-257.099,-24.6845,0,-254.162,-21.3872,-253.861	1/1:128:0,127,0:0:0:127,0:4375,0:-393.558,-38.2308,0,-393.558,-38.2308,-393.558	1/1:21:0,21,0:0:0:21,0:712,0:-64.3857,-6.32163,0,-64.3857,-6.32163,-64.3857	1/2:34:0,17,17:0:0:17,17:567,608:-95.6808,-49.7993,-44.6818,-46.2265,0,-41.109	1/2:11:0,5,6:0:0:5,6:165,216:-31.0986,-17.7718,-16.2667,-13.6685,0,-11.8623	1/1:14:0,14,0:0:0:14,0:481,0:-43.6151,-4.21442,0,-43.6151,-4.21442,-43.6151	1/1:16:0,16,0:0:0:16,0:556,0:-50.3672,-4.81648,0,-50.3672,-4.81648,-50.3672	1/1:185:0,185,0:0:0:185,0:6338,0:-570.372,-55.6906,0,-570.372,-55.6906,-570.372	1/2:269:0,84,181:0:0:84,181:2863,6439:-753.726,-521.445,-496.158,-232.31,0,-177.824	1/2:113:0,37,76:0:0:37,76:1274,2718:-322.536,-219.064,-207.926,-103.819,0,-80.9411	1/2:7:0,2,5:0:0:2,5:72,180:-20.735,-14.859,-14.2569,-6.23466,0,-4.72951	1/2:255:0,72,179:0:0:72,179:2524,6358:-719.241,-513.854,-492.18,-205.418,0,-151.534	1/2:62:0,23,39:0:0:23,39:789,1370:-174.736,-110.68,-103.756,-64.4004,0,-52.6602	1/1:158:0,155,1:0:0:155,1:5345,36:-480.865,-46.6597,0,-477.928,-43.7073,-477.627	1/1:76:0,75,0:0:0:75,0:2548,0:-229.313,-22.5773,0,-229.313,-22.5773,-229.313	1/2:129:0,34,93:0:0:34,93:1160,3267:-358.138,-264.015,-253.78,-94.2047,0,-66.2089	1/2:108:0,34,74:0:0:34,74:1158,2599:-304.274,-210.348,-200.112,-94.2691,0,-71.9928	1/1:124:0,123,0:0:0:123,0:4223,0:-379.946,-37.0267,0,-379.946,-37.0267,-379.946	1/2:287:0,109,178:0:0:109,178:3809,6307:-821.757,-511.91,-479.098,-310.197,0,-256.614	1/1:75:1,73,0:1:36:73,0:2511,0:-222.683,-18.9978,0,-222.984,-21.9752,-225.922	1/2:310:1,88,214:1:24:88,214:3033,7635:-863.767,-617.975,-593.342,-244.266,0,-181.704	1/2:271:0,88,183:0:0:88,183:3018,6502:-773.224,-528.216,-501.725,-245.355,0,-190.266	1/1:20:0,20,0:0:0:20,0:691,0:-62.5103,-6.0206,0,-62.5103,-6.0206,-62.5103	1/2:269:0,79,190:0:0:79,190:2714,6729:-761.542,-541.17,-517.388,-220.718,0,-163.522	1/1:44:0,44,0:0:0:44,0:1497,0:-135.015,-13.2453,0,-135.015,-13.2453,-135.015	1/1:11:0,11,0:0:0:11,0:392,0:-35.6201,-3.31133,0,-35.6201,-3.31133,-35.6201	1/1:173:0,173,0:0:0:173,0:6018,0:-541.711,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chr01	34040680	.	TAT	CAC	33977.6	PASS	AB=0.495402;ABP=3.78908;AC=47;AF=0.25;AN=188;AO=2103;CIGAR=1X1M1X;DP=9411;DPB=9411.33;DPRA=0.802134;EPP=4569.62;EPPR=15759.3;GTI=1;LEN=3;MEANALT=1.27083;MQM=59.9681;MQMR=59.9942;NS=94;NUMALT=1;ODDS=0.00527257;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73802;QR=254529;RO=7288;RPL=0;RPP=4569.62;RPPR=15759.3;RPR=2103;RUN=1;SAF=0;SAP=4569.62;SAR=2103;SRF=0;SRP=15828.7;SRR=7288;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:6,25:6:210:25:874:-69.6441,0,-9.91033	0/1:60:32,28:32:1127:28:979:-70.3587,0,-83.6755	0/0:153:153,0:153:5359:0:0:0,-46.0576,-482.456	0/0:221:221,0:221:7656:0:0:0,-66.5276,-689.105	0/1:86:55,31:55:1934:31:1098:-73.2389,0,-148.448	0/1:12:9,3:9:292:3:108:-6.46281,0,-22.9827	0/1:110:73,37:73:2499:37:1296:-83.8266,0,-192.049	0/0:96:96,0:96:3349:0:0:0,-28.8989,-301.632	0/1:95:59,36:59:2078:36:1280:-86.9061,0,-158.693	0/1:54:36,18:36:1269:18:631:-40.86,0,-98.2554	0/0:52:52,0:52:1811:0:0:0,-15.6536,-163.269	0/0:98:97,0:97:3377:0:0:0,-29.1999,-303.788	0/0:75:75,0:75:2654:0:0:0,-22.5772,-239.109	0/1:68:33,34:33:1162:34:1143:-82.6391,0,-84.3566	0/0:66:66,0:66:2339:0:0:0,-19.868,-210.769	0/0:43:43,0:43:1505:0:0:0,-12.9443,-135.743	0/0:35:35,0:35:1242:0:0:0,-10.536,-112.084	0/0:25:25,0:25:877:0:0:0,-7.52575,-79.2462	0/1:25:7,18:7:250:18:633:-49.7703,0,-15.3209	0/1:231:126,105:126:4388:105:3707:-264.207,0,-325.563	0/1:139:86,53:86:2986:53:1852:-125.112,0,-227.132	0/0:226:226,0:226:7843:0:0:0,-68.0328,-705.92	0/0:145:144,0:144:4991:0:0:0,-43.3483,-449.032	0/1:60:39,21:39:1376:21:731:-48.0474,0,-106.075	0/0:91:91,0:91:3155:0:0:0,-27.3937,-284.181	0/0:277:277,0:277:9714:0:0:0,-83.3853,-874.23	0/0:330:330,0:330:11511:0:0:0,-99.3399,-1035.91	0/0:21:21,0:21:721:0:0:0,-6.32163,-65.2068	0/0:394:394,0:394:13762:0:0:0,-118.606,-1238.4	0/0:152:151,0:151:5297:0:0:0,-45.4555,-476.512	0/0:141:141,0:141:4997:0:0:0,-42.4452,-449.883	0/0:14:14,0:14:477:0:0:0,-4.21442,-43.2529	0/1:45:32,13:32:1138:13:454:-27.6454,0,-89.1833	0/1:12:4,8:4:139:8:260:-20.1041,0,-9.24014	0/0:27:27,0:27:921:0:0:0,-8.12781,-83.1976	0/1:44:13,31:13:456:31:1085:-84.7132,0,-28.1276	0/0:151:151,0:151:5287:0:0:0,-45.4555,-475.973	0/1:196:105,88:105:3670:88:3082:-219.213,0,-272.119	0/1:42:21,21:21:717:21:742:-54.4595,0,-52.2014	0/1:5:2,3:2:61:3:108:-8.57002,0,-4.28861	0/1:142:77,63:77:2718:63:2213:-157.046,0,-202.478	0/1:36:13,23:13:453:23:823:-63.5562,0,-30.2643	0/0:214:213,0:213:7455:0:0:0,-64.1194,-670.652	0/0:52:52,0:52:1847:0:0:0,-15.6536,-166.509	0/1:65:26,39:26:902:39:1349:-102.139,0,-61.9265	0/1:138:65,73:65:2281:73:2534:-186.767,0,-164.01	0/0:189:189,0:189:6553:0:0:0,-56.8947,-589.872	0/1:189:95,94:95:3329:94:3263:-236.998,0,-242.665	0/0:107:107,0:107:3703:0:0:0,-32.2102,-333.479	0/1:155:70,84:70:2408:84:2982:-221.895,0,-170.257	0/1:159:87,72:87:3049:72:2528:-179.907,0,-226.78	0/1:23:11,12:11:392:12:419:-31.1187,0,-28.6966	0/1:138:62,76:62:2162:76:2671:-199.094,0,-153.303	0/0:71:71,0:71:2492:0:0:0,-21.3731,-224.534	0/0:17:17,0:17:593:0:0:0,-5.11751,-53.6967	0/0:127:127,0:127:4406:0:0:0,-38.2308,-396.724	0/0:47:45,2:45:1576:2:72:0,-7.31169,-135.293	0/0:24:24,0:24:827:0:0:0,-7.22472,-74.7438	0/1:11:5,6:5:173:6:214:-16.2964,0,-12.598	0/0:50:50,0:50:1770:0:0:0,-15.0515,-159.582	0/0:106:106,0:106:3746:0:0:0,-31.9092,-337.339	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:165:164,0:164:5672:0:0:0,-49.3689,-510.254	0/1:169:79,89:79:2769:89:3112:-229.533,0,-198.679	0/1:33:15,18:15:526:18:638:-47.815,0,-37.7363	0/0:123:123,0:123:4294:0:0:0,-37.0267,-386.645	0/0:200:200,0:200:6910:0:0:0,-60.206,-621.993	0/1:137:52,84:52:1812:84:2989:-228.103,0,-122.217	0/0:27:27,0:27:966:0:0:0,-8.12781,-87.2574	0/1:46:18,28:18:635:28:995:-76.0177,0,-43.6307	0/0:32:32,0:32:1134:0:0:0,-9.63296,-102.368	0/0:23:23,0:23:813:0:0:0,-6.92369,-73.4915	0/1:155:83,71:83:2865:71:2496:-178.174,0,-211.376	0/1:83:44,39:44:1532:39:1367:-98.3413,0,-113.184	0/0:182:182,0:182:6367:0:0:0,-54.7875,-573.135	0/1:207:102,104:102:3582:104:3648:-266.154,0,-260.218	0/1:123:59,64:59:2070:64:2227:-163.666,0,-149.543	0/1:83:31,52:31:1098:52:1837:-140.623,0,-74.1451	0/0:33:32,0:32:1118:0:0:0,-9.63296,-100.566	0/1:141:73,67:73:2579:67:2349:-169.164,0,-189.858	0/0:144:144,0:144:4979:0:0:0,-43.3483,-448.268	0/1:227:122,104:122:4265:104:3698:-264.79,0,-315.803	0/1:58:27,31:27:958:31:1098:-81.6702,0,-69.0757	0/0:51:51,0:51:1790:0:0:0,-15.3525,-161.381	0/1:40:19,21:19:654:21:712:-52.3521,0,-47.1384	0/1:105:50,55:50:1758:55:1924:-141.826,0,-126.896	0/1:25:6,19:6:216:19:655:-51.7452,0,-12.2648	0/0:76:76,0:76:2631:0:0:0,-22.8783,-237.039	0/0:73:73,0:73:2559:0:0:0,-21.9752,-230.562	0/1:59:26,33:26:917:33:1140:-85.1394,0,-65.0858	0/1:92:47,44:47:1649:44:1533:-110.507,0,-120.943	0/1:78:20,58:20:709:58:2073:-163.361,0,-40.656	0/0:126:126,0:126:4381:0:0:0,-37.9298,-394.475	0/0:78:78,0:78:2745:0:0:0,-23.4803,-247.292
chr01	34079867	.	GC	CA,CC	451005	PASS	AB=0.379363,0.618237;ABP=1161.92,1116.27;AC=139,49;AF=0.739362,0.260638;AN=188;AO=11723,5916;CIGAR=2X,1X1M;DP=17694;DPB=17711.5;DPRA=23.7715,1.37115;EPP=25337.7,12840.8;EPPR=13.8677;GTI=8;LEN=2,1;MEANALT=2.04301,2.40984;MQM=59.8668,59.8966;MQMR=60;NS=94;NUMALT=2;ODDS=3.28729;PAIRED=0,0;PAIREDR=0;PAO=34.5,0.5;PQA=1218,18;PQR=0;PRO=0;QA=414496,210037;QR=150;RO=5;RPL=9953,2395;RPP=12406.4,468.385;RPPR=6.91895;RPR=1770,3521;RUN=1,1;SAF=9961,2396;SAP=12455,466.733;SAR=1762,3520;SRF=1;SRP=6.91895;SRR=4;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:73:0,31,42:0:0:31,42:1109,1461:-209.573,-119.138,-109.806,-90.7891,0,-78.1459	1/2:251:0,88,161:0:0:88,161:3104,5692:-716.298,-463.615,-437.124,-252.714,0,-204.248	1/1:128:0,128,0:0:0:128,0:4532,0:-408.047,-38.5318,0,-408.047,-38.5318,-408.047	1/1:240:0,239,1:0:0:239,1:8496,36:-764.224,-71.9462,0,-761.287,-69.0088,-760.986	1/2:159:0,49,110:0:0:49,110:1735,3909:-460.213,-318.886,-304.136,-141.681,0,-108.568	1/2:78:0,44,34:0:0:44,34:1579,1204:-227.198,-98.4308,-85.1855,-129.123,0,-118.888	1/2:411:0,137,274:0:0:137,274:4846,9744:-1189.09,-794.405,-753.164,-395.043,0,-312.561	1/1:287:0,286,1:0:0:286,1:10105,36:-908.949,-86.0946,0,-906.011,-83.1572,-905.71	1/2:174:0,94,80:0:0:94,80:3311,2864:-503.472,-233.915,-205.618,-269.913,0,-245.83	1/2:270:0,101,169:0:0:101,169:3564,6019:-781.144,-490.933,-460.529,-290.565,0,-239.69	1/1:123:0,123,0:0:0:123,0:4340,0:-390.666,-37.0267,0,-390.666,-37.0267,-390.666	1/1:120:0,120,0:0:0:120,0:4289,0:-385.815,-36.1236,0,-385.815,-36.1236,-385.815	1/1:120:0,120,0:0:0:120,0:4250,0:-382.319,-36.1236,0,-382.319,-36.1236,-382.319	1/2:167:0,65,102:0:0:65,102:2267,3639:-481.376,-297.006,-277.439,-184.722,0,-154.017	1/1:110:0,110,0:0:0:110,0:3897,0:-350.923,-33.1133,0,-350.923,-33.1133,-350.923	1/1:80:0,80,0:0:0:80,0:2809,0:-253.029,-24.0824,0,-253.029,-24.0824,-253.029	1/1:126:0,126,0:0:0:126,0:4464,0:-401.931,-37.9298,0,-401.931,-37.9298,-401.931	1/1:111:0,111,0:0:0:111,0:3943,0:-355.064,-33.4143,0,-355.064,-33.4143,-355.064	1/2:69:0,30,39:0:0:30,39:1078,1380:-200.704,-112.759,-103.728,-88.3023,0,-76.5621	1/2:478:1,168,307:1:25:168,307:5919,10920:-1369.53,-887.993,-839.369,-479.915,0,-389.447	1/2:276:0,74,200:0:0:74,200:2601,7078:-788.213,-576.517,-554.241,-211.689,0,-151.483	1/1:204:0,203,0:0:0:203,0:7162,0:-644.375,-61.1091,0,-644.375,-61.1091,-644.375	1/1:145:0,143,1:0:0:143,1:5083,36:-457.229,-43.0473,0,-454.292,-40.1099,-453.991	1/2:330:1,109,220:1:36:109,220:3817,7842:-946.446,-636.269,-606.394,-307.533,0,-244.244	1/1:160:0,159,0:0:0:159,0:5604,0:-504.123,-47.8638,0,-504.123,-47.8638,-504.123	1/1:875:0,870,0:0:0:870,0:30674,0:-2758.83,-261.896,0,-2758.83,-261.896,-2758.83	1/1:281:0,278,1:0:0:278,1:9828,36:-884.095,-83.6863,0,-881.157,-80.734,-880.856	1/1:40:0,40,0:0:0:40,0:1422,0:-128.275,-12.0412,0,-128.275,-12.0412,-128.275	1/1:573:0,573,0:0:0:573,0:20228,0:-1819.99,-172.49,0,-1819.99,-172.49,-1819.99	1/1:181:0,180,1:0:0:180,1:6425,32:-578.002,-54.1854,0,-575.424,-51.2871,-575.123	1/1:270:0,265,5:0:0:265,5:9402,176:-845.781,-79.773,0,-831.453,-65.4516,-829.948	1/1:10:0,10,0:0:0:10,0:358,0:-32.5629,-3.0103,0,-32.5629,-3.0103,-32.5629	1/2:68:0,9,59:0:0:9,59:317,2088:-196.235,-170.427,-167.718,-26.1605,0,-8.39969	2/2:8:0,0,8:0:0:0,8:0,284:-25.9034,-25.9034,-25.9034,-2.40824,-2.40824,0	1/1:12:0,12,0:0:0:12,0:421,0:-37.8643,-3.61236,0,-37.8643,-3.61236,-37.8643	1/2:12:0,3,9:0:0:3,9:108,316:-34.8841,-26.0696,-25.1665,-9.17208,0,-6.46281	1/1:572:0,569,1:0:0:569,1:20161,21:-1813.54,-171.286,0,-1811.95,-169.71,-1811.65	1/2:280:1,97,182:1:36:97,182:3458,6477:-806.506,-524.931,-498.669,-278.935,0,-227.085	1/2:122:0,67,55:0:0:67,55:2382,1933:-351.294,-157.688,-137.519,-193.959,0,-177.402	1/2:6:0,3,3:0:0:3,3:108,108:-17.9843,-9.17208,-8.26899,-9.17208,0,-8.26899	1/2:282:0,122,158:0:0:122,158:4311,5622:-809.216,-458.129,-421.404,-351.081,0,-303.518	1/2:77:0,27,50:0:0:27,50:961,1763:-222.216,-143.897,-135.769,-78.6742,0,-63.6227	1/1:116:0,115,0:0:0:115,0:4075,0:-366.572,-34.6185,0,-366.572,-34.6185,-366.572	1/1:148:0,148,0:0:0:148,0:5206,0:-468.683,-44.5524,0,-468.683,-44.5524,-468.683	1/2:146:0,53,93:0:0:53,93:1871,3302:-421.658,-269.378,-253.423,-152.633,0,-124.638	1/2:305:0,147,158:0:0:147,158:5144,5596:-874.36,-455.877,-411.625,-418.515,0,-370.952	1/1:75:0,75,0:0:0:75,0:2651,0:-238.715,-22.5773,0,-238.715,-22.5773,-238.715	1/2:270:0,97,172:0:0:97,172:3425,6132:-778.835,-499.95,-470.75,-278.988,0,-227.211	1/1:152:0,149,2:0:0:149,2:5276,72:-474.583,-44.8535,0,-468.708,-38.952,-468.106	1/2:240:0,75,165:0:0:75,165:2658,5863:-694.436,-478.108,-455.531,-216.682,0,-167.012	1/2:558:0,297,259:0:0:297,259:10444,9203:-1600.01,-749.907,-660.502,-850.098,0,-772.131	1/2:10:0,1,9:0:0:1,9:36,320:-29.3709,-26.4331,-26.1321,-3.29724,0,-0.587975	1/2:213:0,58,154:0:0:58,154:2026,5487:-611.995,-447.196,-429.737,-164.79,0,-118.431	1/1:163:0,163,0:0:0:163,0:5779,0:-520.226,-49.0679,0,-520.226,-49.0679,-520.226	1/1:13:0,13,0:0:0:13,0:455,0:-41.2817,-3.91339,0,-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chr01	34079876	.	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chr01	34493951	.	C	T	29398	PASS	AB=0.495016;ABP=3.76793;AC=44;AF=0.234043;AN=188;AO=1741;CIGAR=1X;DP=8321;DPB=8321;DPRA=0.90064;EPP=3748.88;EPPR=14239.2;GTI=2;LEN=1;MEANALT=1;MQM=59.9259;MQMR=59.912;NS=94;NUMALT=1;ODDS=0.77922;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62347;QR=235052;RO=6580;RPL=1737;RPP=3748.88;RPPR=14239.2;RPR=4;RUN=1;SAF=0;SAP=3783.54;SAR=1741;SRF=0;SRP=14291.3;SRR=6580;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:34:20,14:20:716:14:504:-35.4631,0,-54.5327	0/1:115:59,56:59:2124:56:2016:-147.094,0,-156.809	0/0:129:129,0:129:4636:0:0:0,-38.8329,-417.401	0/0:215:215,0:215:7682:0:0:0,-64.7214,-691.413	0/1:77:33,44:33:1184:44:1584:-119.672,0,-83.689	0/1:57:28,29:28:1000:29:1044:-77.1161,0,-73.1567	0/0:105:105,0:105:3742:0:0:0,-31.6081,-336.976	0/0:161:161,0:161:5746:0:0:0,-48.4658,-517.193	0/1:119:72,47:72:2573:47:1688:-116.384,0,-195.995	0/1:95:44,51:44:1565:51:1836:-136.917,0,-112.542	0/0:59:59,0:59:2105:0:0:0,-17.7608,-189.717	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.011	0/1:61:35,26:35:1245:26:936:-66.1405,0,-93.9899	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.846	0/0:69:69,0:69:2454:0:0:0,-20.7711,-221.111	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.466	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/1:129:56,73:56:2008:73:2609:-196.223,0,-142.16	0/0:133:133,0:133:4715:0:0:0,-40.037,-424.509	0/0:84:84,0:84:2986:0:0:0,-25.2865,-268.969	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/1:99:64,35:64:2292:35:1260:-83.9031,0,-176.739	0/0:54:54,0:54:1925:0:0:0,-16.2556,-173.525	0/0:354:354,0:354:12661:0:0:0,-106.565,-1139.1	0/0:209:209,0:209:7474:0:0:0,-62.9153,-672.7	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.7577	0/0:163:163,0:163:5822:0:0:0,-49.0679,-524.09	0/0:141:141,0:141:5055:0:0:0,-42.4452,-455.083	0/0:170:170,0:170:5999:0:0:0,-51.1751,-539.698	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:40:24,16:24:864:16:561:-38.7759,0,-66.0414	0/1:8:6,2:6:212:2:72:-4.42848,0,-17.0166	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.721	0/1:29:13,16:13:464:16:576:-43.4451,0,-33.3676	0/0:164:164,0:164:5862:0:0:0,-49.3689,-527.682	0/1:246:107,139:107:3833:139:4988:-375.011,0,-271.11	0/1:70:40,30:40:1440:30:1076:-76.0808,0,-108.826	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:129:62,67:62:2205:67:2382:-175.8,0,-159.88	0/1:38:17,21:17:612:21:737:-55.2116,0,-43.9743	0/0:110:110,0:110:3907:0:0:0,-33.1133,-351.802	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.282	0/1:54:28,26:28:1004:26:932:-67.9428,0,-74.4198	0/1:84:50,34:50:1800:34:1220:-84.8203,0,-136.951	0/0:192:192,0:192:6836:0:0:0,-57.7978,-615.263	0/0:174:173,1:173:6171:1:36:0,-48.7809,-551.739	0/0:80:80,0:80:2868:0:0:0,-24.0824,-258.356	0/1:142:64,78:64:2270:78:2788:-208.412,0,-161.813	0/1:93:40,53:40:1402:53:1870:-140.579,0,-98.4773	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	0/1:141:70,71:70:2504:71:2521:-184.695,0,-183.167	0/0:33:33,0:33:1169:0:0:0,-9.93399,-105.515	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:121:120,1:120:4275:1:36:0,-32.8264,-381.32	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:21:9,12:9:324:12:432:-32.8996,0,-23.1842	0/0:114:114,0:114:4066:0:0:0,-34.3174,-366.124	0/0:101:101,0:101:3617:0:0:0,-30.404,-325.689	0/1:10:3,7:3:108:7:248:-19.6539,0,-7.06487	0/0:114:114,0:114:4104:0:0:0,-34.3174,-369.543	0/1:203:104,99:104:3709:99:3545:-258.135,0,-272.201	0/1:81:46,35:46:1637:35:1250:-88.2278,0,-123.233	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.136	0/0:137:136,1:136:4828:1:36:0,-37.6428,-431.027	0/1:82:34,48:34:1209:48:1698:-128.418,0,-84.4293	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/1:70:33,37:33:1173:37:1332:-99.1099,0,-84.8027	0/0:75:75,0:75:2681:0:0:0,-22.5772,-241.533	0/1:26:17,9:17:608:9:320:-21.3156,0,-47.2252	0/1:147:71,76:71:2540:76:2721:-200.88,0,-184.599	0/1:63:35,28:35:1256:28:1008:-72.0715,0,-93.7524	0/0:185:185,0:185:6588:0:0:0,-55.6905,-592.911	0/1:137:67,70:67:2393:70:2516:-185.45,0,-174.384	0/1:139:67,72:67:2397:72:2592:-191.684,0,-174.12	0/1:87:38,49:38:1364:49:1756:-132.134,0,-96.8711	0/0:21:21,0:21:741:0:0:0,-6.32163,-66.8536	0/1:99:51,48:51:1821:48:1728:-126.003,0,-134.367	0/0:75:75,0:75:2681:0:0:0,-22.5772,-241.533	0/0:200:200,0:200:7128:0:0:0,-60.206,-641.575	0/1:71:36,35:36:1281:35:1245:-90.9796,0,-94.2181	0/0:45:45,0:45:1605:0:0:0,-13.5463,-144.738	0/1:59:32,27:32:1137:27:972:-70.0371,0,-84.8758	0/1:92:53,39:53:1904:39:1396:-98.2443,0,-143.625	0/1:38:25,13:25:900:13:468:-31.0205,0,-69.8819	0/0:71:71,0:71:2556:0:0:0,-21.3731,-230.29	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/1:46:22,24:22:788:24:860:-63.8745,0,-57.3974	0/1:107:65,42:65:2305:42:1512:-104.119,0,-175.499	0/1:43:17,26:17:608:26:936:-71.6128,0,-42.1077	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:79:79,0:79:2844:0:0:0,-23.7814,-256.197
chr01	34493966	.	CTGCT	TTGCT	139208	PASS	AB=0.499286;ABP=3.02581;AC=144;AF=0.765957;AN=188;AO=6486;CIGAR=1X4M;DP=8283;DPB=8293;DPRA=0;EPP=14087.2;EPPR=3796.57;GTI=3;LEN=1;MEANALT=1.28723;MQM=59.9184;MQMR=59.9222;NS=94;NUMALT=1;ODDS=0.53336;PAIRED=0;PAIREDR=0;PAO=25;PQA=702;PQR=0;PRO=0;QA=232255;QR=62247;RO=1747;RPL=6486;RPP=14087.2;RPPR=3796.57;RPR=0;RUN=1;SAF=0;SAP=14087.2;SAR=6486;SRF=0;SRP=3796.57;SRR=1747;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:33:15,18:15:533:18:648:-48.6611,0,-38.3132	0/1:116:56,60:56:1997:60:2148:-158.668,0,-145.085	1/1:128:1,126:1:36:126:4490:-400.668,-34.9924,0	1/1:212:1,208:1:36:208:7461:-667.904,-59.6861,0	0/1:76:44,32:44:1579:32:1144:-80.3912,0,-119.524	0/1:56:29,26:29:1041:26:928:-66.8639,0,-77.0301	1/1:104:0,104:0:0:104:3732:-336.078,-31.3071,0	1/1:163:0,161:0:0:161:5758:-517.939,-48.4658,0	0/1:119:47,72:47:1686:72:2569:-195.576,0,-116.146	0/1:94:51,43:51:1819:43:1544:-110.897,0,-135.63	1/1:58:0,58:0:0:58:2088:-188.131,-17.4597,0	1/1:54:0,54:0:0:54:1944:-175.236,-16.2556,0	1/1:55:0,52:0:0:52:1868:-167.951,-15.6536,0	0/1:61:26,35:26:932:35:1260:-95.3427,0,-65.7802	1/1:47:0,44:0:0:44:1580:-142.15,-13.2453,0	1/1:47:0,46:0:0:46:1652:-148.608,-13.8474,0	1/1:68:0,68:0:0:68:2444:-220.215,-20.47,0	1/1:33:0,33:0:0:33:1180:-106.507,-9.93399,0	1/1:43:1,42:1:30:42:1497:-132.012,-9.94472,0	0/1:128:72,56:72:2552:56:1997:-141.47,0,-191.398	1/1:134:0,134:0:0:134:4800:-432.155,-40.338,0	1/1:83:0,83:0:0:83:2980:-268.431,-24.9855,0	1/1:59:0,59:0:0:59:2086:-188.006,-17.7608,0	0/1:99:35,64:35:1250:64:2292:-176.739,0,-83.003	1/1:54:0,54:0:0:54:1934:-174.336,-16.2556,0	1/1:347:0,347:0:0:347:12436:-1118.52,-104.457,0	1/1:210:0,210:0:0:210:7532:-677.918,-63.2163,0	1/1:24:0,23:0:0:23:819:-73.643,-6.92369,0	1/1:162:0,161:0:0:161:5780:-519.952,-48.4658,0	1/1:141:0,141:0:0:141:5045:-454.113,-42.4452,0	1/1:165:0,163:0:0:163:5815:-522.779,-49.0679,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	0/1:40:16,24:16:574:24:860:-65.6806,0,-39.9532	0/1:8:2,6:2:70:6:216:-17.3823,0,-4.23909	1/1:24:0,24:0:0:24:849:-76.727,-7.22472,0	0/1:29:16,13:16:576:13:468:-33.7298,0,-43.4451	1/1:162:0,158:0:0:158:5676:-510.59,-47.5627,0	0/1:244:140,103:140:4966:103:3678:-257.819,0,-373.691	0/1:71:30,41:30:1073:41:1472:-111.403,0,-75.5097	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:130:67,63:67:2377:63:2247:-163.357,0,-175.044	0/1:38:21,17:21:736:17:608:-43.6129,0,-55.1214	1/1:108:0,108:0:0:108:3872:-348.536,-32.5112,0	1/1:50:0,49:0:0:49:1745:-156.973,-14.7505,0	0/1:54:26,28:26:915:28:993:-73.4265,0,-66.4104	0/1:84:34,50:34:1204:50:1773:-134.546,0,-83.3783	1/1:189:0,188:0:0:188:6714:-603.773,-56.5936,0	1/1:174:1,171:1:36:171:6137:-548.4,-48.5387,0	1/1:80:0,80:0:0:80:2842:-256.015,-24.0824,0	0/1:141:78,63:78:2777:63:2253:-160.586,0,-207.727	0/1:93:53,40:53:1893:40:1417:-99.8296,0,-142.653	0/1:16:7,7:7:252:7:252:-18.4547,0,-18.4547	0/1:141:71,70:71:2533:70:2516:-184.246,0,-185.776	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	1/1:29:0,29:0:0:29:1044:-94.2748,-8.72987,0	1/1:118:1,117:1:35:117:4181:-372.853,-32.0229,0	1/1:46:0,44:0:0:44:1569:-141.153,-13.2453,0	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:21:12,9:12:427:9:324:-23.1842,0,-32.4468	1/1:115:0,115:0:0:115:4132:-372.062,-34.6185,0	1/1:101:0,100:0:0:100:3596:-323.44,-30.103,0	0/1:10:7,3:7:250:3:108:-7.06487,0,-19.8365	1/1:114:0,114:0:0:114:4100:-369.183,-34.3174,0	0/1:200:99,101:99:3529:101:3583:-262.019,0,-257.425	0/1:81:35,46:35:1246:46:1648:-124.225,0,-87.7842	1/1:69:0,69:0:0:69:2471:-222.373,-20.7711,0	1/1:138:1,137:1:36:137:4901:-437.542,-37.9439,0	0/1:82:48,34:48:1720:34:1209:-84.4293,0,-130.401	1/1:34:0,34:0:0:34:1224:-110.467,-10.235,0	0/1:69:37,32:37:1316:32:1148:-82.858,0,-97.9709	1/1:74:0,72:0:0:72:2584:-232.449,-21.6742,0	0/1:24:9,15:9:318:15:536:-41.2939,0,-21.6821	0/1:147:76,68:76:2726:68:2423:-174.631,0,-201.891	0/1:63:28,35:28:995:35:1254:-93.9288,0,-70.9	1/1:183:0,183:0:0:183:6557:-590.003,-55.0885,0	0/1:135:70,65:70:2481:65:2336:-169.742,0,-182.786	0/1:137:73,63:73:2602:63:2268:-162.945,0,-193.008	0/1:88:49,39:49:1727:39:1397:-99.5381,0,-129.224	1/1:21:0,18:0:0:18:640:-57.5913,-5.41854,0	0/1:99:48,51:48:1724:51:1824:-134.639,0,-125.644	1/1:75:0,75:0:0:75:2700:-243.243,-22.5773,0	1/1:200:0,199:0:0:199:7126:-640.975,-59.905,0	0/1:73:36,37:36:1284:37:1328:-97.847,0,-93.8883	1/1:45:0,45:0:0:45:1620:-146.09,-13.5464,0	0/1:59:27,31:27:962:31:1112:-82.5811,0,-69.087	0/1:93:39,53:39:1398:53:1903:-143.282,0,-98.1233	0/1:38:13,25:13:462:25:900:-69.8819,0,-30.4773	1/1:72:0,67:0:0:67:2393:-215.269,-20.169,0	1/1:44:0,44:0:0:44:1584:-142.852,-13.2453,0	0/1:46:24,22:24:854:22:792:-57.7583,0,-63.3333	0/1:107:42,64:42:1495:64:2296:-174.631,0,-102.531	0/1:42:26,16:26:935:16:561:-38.1175,0,-71.766	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:79:0,79:0:0:79:2836:-255.419,-23.7814,0
chr01	34729186	.	G	A	134184	PASS	AB=0.485878;ABP=8.16225;AC=144;AF=0.765957;AN=188;AO=6218;CIGAR=1X;DP=7763;DPB=7763;DPRA=0;EPP=13479.2;EPPR=3323.24;GTI=3;LEN=1;MEANALT=1.04255;MQM=59.9775;MQMR=60;NS=94;NUMALT=1;ODDS=1.34574;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=222094;QR=54933;RO=1541;RPL=6215;RPP=13479.2;RPPR=3323.24;RPR=3;RUN=1;SAF=0;SAP=13505.2;SAR=6218;SRF=0;SRP=3349.25;SRR=1541;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:36,17:36:1288:17:612:-39.4588,0,-100.269	0/1:48:29,19:29:1036:19:684:-47.4409,0,-79.1045	1/1:113:0,112:0:0:112:3988:-358.899,-33.7154,0	1/1:201:0,201:0:0:201:7208:-648.744,-60.507,0	0/1:51:27,24:27:963:24:864:-62.73,0,-71.6334	0/1:25:11,14:11:388:14:500:-37.8104,0,-27.7316	1/1:76:2,74:2:72:74:2647:-231.639,-16.0416,0	1/1:100:0,100:0:0:100:3554:-320.069,-30.103,0	0/1:75:39,36:39:1383:36:1288:-93.6463,0,-102.191	0/1:71:30,41:30:1076:41:1445:-108.971,0,-75.7797	1/1:78:0,78:0:0:78:2808:-252.873,-23.4803,0	1/1:142:0,142:0:0:142:5086:-457.882,-42.7463,0	1/1:91:1,90:1:36:90:3222:-286.603,-23.7955,0	0/1:61:25,36:25:887:36:1292:-98.2209,0,-61.7853	1/1:97:0,97:0:0:97:3462:-311.793,-29.1999,0	1/1:68:0,68:0:0:68:2422:-218.235,-20.47,0	1/1:40:0,40:0:0:40:1411:-127.283,-12.0412,0	1/1:33:0,33:0:0:33:1188:-107.229,-9.93399,0	1/1:50:0,50:0:0:50:1770:-159.581,-15.0515,0	0/1:155:79,76:79:2823:76:2736:-199.822,0,-207.649	1/1:133:0,133:0:0:133:4735:-426.31,-40.037,0	1/1:105:0,105:0:0:105:3735:-336.352,-31.6082,0	1/1:81:0,81:0:0:81:2899:-261.145,-24.3834,0	0/1:47:15,32:15:540:32:1148:-89.4799,0,-34.7881	1/1:100:0,100:0:0:100:3561:-320.697,-30.103,0	1/1:198:0,198:0:0:198:7073:-636.632,-59.6039,0	1/1:194:0,194:0:0:194:6956:-626.104,-58.3998,0	1/1:36:0,36:0:0:36:1283:-115.773,-10.8371,0	1/1:278:1,276:1:36:276:9857:-883.549,-80.0719,0	1/1:127:0,127:0:0:127:4540:-408.766,-38.2308,0	1/1:108:0,107:0:0:107:3819:-343.603,-32.2102,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:25:10,15:10:360:15:531:-40.5962,0,-25.2186	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	0/1:16:7,9:7:248:9:315:-23.8707,0,-17.8477	1/1:246:1,245:1:36:245:8753:-784.157,-70.4551,0	0/1:116:56,60:56:1996:60:2160:-159.747,0,-144.995	0/1:83:40,43:40:1432:43:1540:-113.908,0,-104.192	0/1:4:3,1:3:104:1:36:-2.39415,0,-8.49869	0/1:125:47,78:47:1676:78:2788:-213.532,0,-113.498	0/1:24:16,8:16:572:8:280:-18.3146,0,-44.5887	1/1:168:0,168:0:0:168:6002:-540.286,-50.573,0	1/1:65:0,65:0:0:65:2301:-207.338,-19.567,0	0/1:81:44,37:44:1576:37:1313:-94.0863,0,-117.748	0/1:114:50,64:50:1778:64:2252:-168.624,0,-125.984	1/1:72:0,72:0:0:72:2560:-230.649,-21.6742,0	1/1:111:1,110:1:36:110:3915:-348.899,-29.8161,0	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	0/1:100:50,50:50:1792:50:1792:-131.457,0,-131.459	0/1:93:45,48:45:1590:48:1717:-126.819,0,-115.393	0/1:7:2,5:2:72:5:171:-13.6182,0,-4.72951	0/1:133:76,57:76:2724:57:2052:-144.914,0,-205.366	1/1:75:0,75:0:0:75:2675:-240.995,-22.5773,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:104:0,104:0:0:104:3732:-336.08,-31.3071,0	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	0/1:8:1,7:1:36:7:248:-20.256,0,-1.19003	0/1:28:13,15:13:464:15:536:-40.146,0,-33.6687	1/1:72:0,72:0:0:72:2564:-231.011,-21.6742,0	1/1:111:3,108:3:100:108:3848:-337.185,-24.0839,0	0/1:17:13,4:13:464:4:144:-8.19611,0,-36.98	1/1:120:1,119:1:32:119:4263:-380.648,-32.9243,0	0/1:111:54,57:54:1906:57:2044:-150.817,0,-138.402	0/1:51:27,24:27:960:24:860:-62.3693,0,-71.3637	1/1:55:0,55:0:0:55:1972:-177.755,-16.5567,0	1/1:106:1,105:1:36:105:3743:-333.473,-28.3109,0	0/1:113:80,33:80:2846:33:1180:-72.4917,0,-222.361	1/1:36:0,36:0:0:36:1287:-116.133,-10.8371,0	0/1:23:13,10:13:459:10:360:-25.8206,0,-34.7204	1/1:40:0,40:0:0:40:1432:-129.178,-12.0412,0	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	0/1:119:60,59:60:2131:59:2116:-154.886,0,-156.235	0/1:70:28,42:28:996:42:1512:-115.303,0,-68.8828	1/1:106:0,106:0:0:106:3762:-338.78,-31.9092,0	0/1:148:76,72:76:2728:72:2565:-186.546,0,-201.21	0/1:82:58,24:58:2071:24:858:-52.8568,0,-161.976	0/1:60:39,21:39:1387:21:756:-50.3054,0,-107.066	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	0/1:60:37,23:37:1315:23:824:-56.4215,0,-100.589	1/1:77:0,77:0:0:77:2736:-246.481,-23.1793,0	1/1:154:1,153:1:36:153:5450:-487.029,-42.7603,0	0/1:69:36,33:36:1280:33:1171:-84.9256,0,-94.7322	1/1:92:0,92:0:0:92:3281:-295.51,-27.6948,0	0/1:51:18,33:18:639:33:1168:-90.0726,0,-42.4857	0/1:138:60,78:60:2148:78:2796:-210.338,0,-152.045	0/1:23:14,9:14:500:9:320:-22.2187,0,-38.4125	1/1:79:0,79:0:0:79:2828:-254.759,-23.7814,0	1/1:85:0,85:0:0:85:3037:-273.56,-25.5876,0	0/1:49:27,22:27:960:22:780:-55.7726,0,-71.9658	0/1:121:56,65:56:1991:65:2336:-174.075,0,-143.039	0/1:110:75,35:75:2676:35:1248:-79.5116,0,-207.972	1/1:102:0,101:0:0:101:3616:-325.286,-30.404,0	1/1:123:0,123:0:0:123:4395:-395.717,-37.0267,0
chr01	34813271	.	TGATA	CGA,TGA	128145	PASS	AB=0.495094,0.501132;ABP=3.56423,3.0398;AC=143,45;AF=0.760638,0.239362;AN=188;AO=5067,1341;CIGAR=1X1M2D1M,2M2D1M;DP=6422;DPB=3855.6;DPRA=0,0.904926;EPP=11005.9,2914.95;EPPR=13.8677;GTI=1;LEN=3,2;MEANALT=1.62766,2.05357;MQM=39.0432,51.5846;MQMR=54;NS=94;NUMALT=2;ODDS=4.48642;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=178509,47306;QR=162;RO=5;RPL=5067,1341;RPP=11005.9,2914.95;RPPR=13.8677;RPR=0,0;RUN=1,1;SAF=5067,1341;SAP=11005.9,2914.95;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=complex,del	GT:DP:AD:RO:QR:AO:QA:GL	1/2:53:0,18,35:0:0:18,35:633,1216:-145.261,-98.334,-92.9154,-47.2578,0,-36.7217	1/2:57:0,29,28:0:0:29,28:1002,983:-155.194,-79.7957,-71.0659,-75.7339,0,-67.305	1/1:74:0,74,0:0:0:74,0:2627,0:-218.095,-22.2762,0,-218.095,-22.2762,-218.095	1/1:154:0,154,0:0:0:154,0:5409,0:-468.294,-46.3586,0,-468.294,-46.3586,-468.294	1/2:37:0,12,25:0:0:12,25:419,868:-102.065,-69.81,-66.1977,-32.5899,0,-25.0642	1/2:36:0,11,25:0:0:11,25:394,883:-101.642,-71.9425,-68.6312,-30.0387,0,-22.513	1/1:45:0,45,0:0:0:45,0:1602,0:-138.729,-13.5464,0,-138.729,-13.5464,-138.729	1/1:162:0,161,1:0:0:161,1:5615,36:-465.695,-48.4658,0,-462.771,-45.1838,-462.47	1/2:48:0,23,25:0:0:23,25:824,877:-131.455,-71.3957,-64.472,-60.3952,0,-52.8695	1/2:76:0,40,36:0:0:40,36:1391,1251:-208.418,-101.548,-89.5069,-107.208,0,-96.3714	1/1:59:0,59,0:0:0:59,0:2101,0:-181.18,-17.7608,0,-181.18,-17.7608,-181.18	1/1:122:0,122,0:0:0:122,0:4279,0:-355.852,-36.7257,0,-355.852,-36.7257,-355.852	1/1:83:0,83,0:0:0:83,0:2948,0:-244.654,-24.9855,0,-244.654,-24.9855,-244.654	1/2:64:0,36,28:0:0:36,28:1227,979:-172.663,-79.2776,-68.4405,-93.7214,0,-85.2926	1/1:82:0,82,0:0:0:82,0:2886,0:-247.897,-24.6845,0,-247.897,-24.6845,-247.897	1/1:79:0,79,0:0:0:79,0:2810,0:-239.99,-23.7814,0,-239.99,-23.7814,-239.99	1/1:33:0,33,0:0:0:33,0:1160,0:-96.7372,-9.93399,0,-96.7372,-9.93399,-96.7372	1/1:32:0,32,0:0:0:32,0:1134,0:-94.5107,-9.63296,0,-94.5107,-9.63296,-94.5107	1/1:38:0,37,1:0:0:37,1:1287,36:-107.816,-11.1381,0,-104.9,-7.86571,-104.599	1/2:40:0,21,19:0:0:21,19:731,684:-113.01,-56.083,-49.7614,-57.2742,0,-51.5546	1/1:137:0,137,0:0:0:137,0:4817,0:-409.302,-41.2411,0,-409.302,-41.2411,-409.302	1/1:11:0,11,0:0:0:11,0:388,0:-34.3145,-3.31133,0,-34.3145,-3.31133,-34.3145	1/1:68:0,66,2:0:0:66,2:2302,72:-199.877,-19.868,0,-194.02,-13.6526,-193.418	1/2:48:0,25,23:0:0:25,23:882,816:-134.204,-66.0997,-58.5739,-68.448,0,-61.5243	1/1:31:0,31,0:0:0:31,0:1087,0:-92.9652,-9.33193,0,-92.9652,-9.33193,-92.9652	1/1:183:0,183,0:0:0:183,0:6457,0:-563.405,-55.0885,0,-563.405,-55.0885,-563.405	1/2:169:0,103,66:0:0:103,66:3626,2320:-466.69,-188.601,-157.595,-278.433,0,-258.565	1/1:29:0,29,0:0:0:29,0:1027,0:-87.6138,-8.72987,0,-87.6138,-8.72987,-87.6138	1/1:107:0,106,1:0:0:106,1:3741,36:-326.529,-31.9092,0,-323.594,-28.6145,-323.293	1/1:81:0,81,0:0:0:81,0:2870,0:-245.661,-24.3834,0,-245.661,-24.3834,-245.661	1/1:43:0,43,0:0:0:43,0:1517,0:-132.213,-12.9443,0,-132.213,-12.9443,-132.213	1/1:15:0,15,0:0:0:15,0:530,0:-45.7945,-4.51545,0,-45.7945,-4.51545,-45.7945	1/2:11:0,6,5:0:0:6,5:216,161:-29.3351,-13.2671,-11.461,-16.3935,0,-14.8884	1/2:7:0,3,4:0:0:3,4:108,144:-20.1522,-12.0306,-11.1275,-8.46612,0,-7.262	1/1:7:0,7,0:0:0:7,0:243,0:-20.7868,-2.10721,0,-20.7868,-2.10721,-20.7868	1/2:39:0,24,15:0:0:24,15:853,536:-107.368,-43.8605,-36.6358,-63.8519,0,-59.3365	1/1:179:0,179,0:0:0:179,0:6334,0:-552.993,-53.8844,0,-552.993,-53.8844,-552.993	1/2:58:0,23,35:0:0:23,35:817,1240:-163.998,-100.808,-93.8842,-63.534,0,-52.9979	1/2:70:0,33,37:0:0:33,37:1182,1316:-194.799,-106.472,-96.5377,-88.6682,0,-77.5301	1/2:8:0,5,3:0:0:5,3:180,108:-23.0375,-9.14675,-7.6416,-14.2434,0,-13.3403	1/2:88:0,43,45:0:0:43,45:1513,1616:-247.264,-131.821,-118.877,-115.788,0,-102.241	1/2:40:0,24,16:0:0:24,16:825,572:-109.898,-46.8564,-39.6316,-63.3856,0,-58.5691	1/1:146:0,146,0:0:0:146,0:5133,0:-437.75,-43.9504,0,-437.75,-43.9504,-437.75	1/1:70:0,70,0:0:0:70,0:2487,0:-215.174,-21.0721,0,-215.174,-21.0721,-215.174	1/2:58:0,28,30:0:0:28,30:988,1060:-163.952,-86.4543,-78.0255,-77.8444,0,-68.8135	1/2:81:0,27,54:0:0:27,54:966,1900:-231.268,-154.818,-146.69,-76.7991,0,-60.5435	1/1:58:0,58,0:0:0:58,0:2051,0:-171.371,-17.4597,0,-171.371,-17.4597,-171.371	1/1:95:0,93,2:0:0:93,2:3257,72:-280.335,-27.9958,0,-274.469,-21.7708,-273.867	1/1:39:0,39,0:0:0:39,0:1400,0:-121.457,-11.7402,0,-121.457,-11.7402,-121.457	1/2:82:1,41,35:1:36:41,35:1434,1223:-208.502,-96.4616,-87.0435,-109.456,0,-101.844	1/2:38:0,15,23:0:0:15,23:529,824:-109.531,-67.4428,-62.9274,-42.4384,0,-35.5147	1/2:17:0,6,11:0:0:6,11:203,396:-48.5561,-32.6132,-30.807,-16.2825,0,-12.9711	1/2:76:0,42,34:0:0:42,34:1456,1193:-205.702,-95.8669,-83.2236,-110.171,0,-99.9358	1/1:36:0,36,0:0:0:36,0:1244,0:-108.882,-10.8371,0,-108.882,-10.8371,-108.882	1/1:5:0,5,0:0:0:5,0:180,0:-15.3003,-1.50515,0,-15.3003,-1.50515,-15.3003	1/1:119:0,119,0:0:0:119,0:4158,0:-355.473,-35.8226,0,-355.473,-35.8226,-355.473	1/1:56:0,52,1:0:0:52,1:1842,36:-159.003,-15.6536,0,-156.07,-12.6992,-15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chr01	35501316	.	A	C	26810.3	PASS	AB=0.479976;ABP=14.837;AC=44;AF=0.234043;AN=188;AO=1640;CIGAR=1X;DP=8780;DPB=8780;DPRA=0.801186;EPP=3564.23;EPPR=15494.3;GTI=2;LEN=1;MEANALT=1.05882;MQM=59.8835;MQMR=59.9519;NS=94;NUMALT=1;ODDS=4.13182;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58686;QR=252705;RO=7134;RPL=0;RPP=3564.23;RPPR=12076.3;RPR=1640;RUN=1;SAF=1640;SAP=3564.23;SAR=0;SRF=6716;SRP=12076.3;SRR=418;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:32,41:32:1148:41:1454:-109.181,0,-81.6546	0/1:63:40,22:40:1398:22:784:-51.8615,0,-107.091	0/0:148:148,0:148:5281:0:0:0,-44.5524,-475.426	0/0:143:142,1:142:5042:1:32:0,-39.848,-450.727	0/1:41:25,16:25:900:16:576:-39.8328,0,-68.9788	0/1:38:15,23:15:536:23:824:-63.0442,0,-37.1357	0/0:106:106,0:106:3755:0:0:0,-31.9092,-338.148	0/0:100:100,0:100:3576:0:0:0,-30.103,-321.962	0/1:114:46,68:46:1636:68:2422:-183.475,0,-113.211	0/1:71:20,51:20:708:51:1828:-143.428,0,-42.6725	0/0:152:152,0:152:5406:0:0:0,-45.7566,-486.669	0/0:136:136,0:136:4822:0:0:0,-40.9401,-434.133	0/0:142:141,0:141:5000:0:0:0,-42.4452,-449.785	0/1:88:51,37:51:1798:37:1332:-93.661,0,-135.607	0/0:105:105,0:105:3727:0:0:0,-31.6081,-335.628	0/0:115:115,0:115:4074:0:0:0,-34.6184,-366.847	0/0:74:74,0:74:2569:0:0:0,-22.2762,-231.454	0/0:48:48,0:48:1690:0:0:0,-14.4494,-152.382	0/0:66:66,0:66:2313:0:0:0,-19.868,-208.431	0/1:117:56,61:56:1970:61:2185:-161.204,0,-142.351	0/0:156:156,0:156:5500:0:0:0,-46.9607,-495.129	0/0:44:44,0:44:1565:0:0:0,-13.2453,-141.14	0/0:93:92,1:92:3190:1:36:0,-24.3975,-283.694	0/1:36:24,12:24:856:12:432:-28.3841,0,-66.524	0/0:97:97,0:97:3423:0:0:0,-29.1999,-308.281	0/0:209:208,1:208:7376:1:36:0,-59.317,-660.291	0/1:197:105,92:105:3707:92:3304:-238.275,0,-274.528	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.82	0/0:200:200,0:200:7146:0:0:0,-60.206,-643.109	0/0:79:79,0:79:2787:0:0:0,-23.7814,-251.067	0/0:95:95,0:95:3392:0:0:0,-28.5978,-305.495	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2075	0/1:24:12,12:12:428:12:432:-31.9965,0,-31.6341	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:23:13,10:13:464:10:345:-24.4571,0,-35.1738	0/0:258:258,0:258:9191:0:0:0,-77.6657,-827.154	0/1:67:38,29:38:1364:29:1036:-73.3826,0,-102.891	0/1:103:54,49:54:1913:49:1756:-127.239,0,-141.431	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/0:87:86,1:86:3041:1:36:0,-22.5913,-270.322	0/1:59:41,18:41:1442:18:648:-40.8911,0,-112.311	0/0:168:168,0:168:5906:0:0:0,-50.573,-531.208	0/0:76:76,0:76:2709:0:0:0,-22.8783,-244.053	0/1:59:29,30:29:1032:30:1076:-79.3921,0,-75.4327	0/1:99:47,52:47:1688:52:1860:-137.878,0,-122.405	0/0:93:93,0:93:3275:0:0:0,-27.9958,-294.96	0/0:117:115,2:115:4051:2:72:0,-28.3838,-357.905	0/0:92:92,0:92:3220:0:0:0,-27.6948,-290.019	0/1:90:48,42:48:1693:42:1504:-108.562,0,-125.562	0/1:84:41,43:41:1449:43:1548:-114.327,0,-105.417	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:130:66,64:66:2360:64:2269:-165.333,0,-173.525	0/0:53:52,0:52:1822:0:0:0,-15.6536,-163.889	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0039	0/0:127:127,0:127:4499:0:0:0,-38.2308,-405.012	0/0:51:51,0:51:1778:0:0:0,-15.3525,-160.299	0/1:16:10,6:10:360:6:216:-14.9731,0,-27.9278	0/1:24:14,10:14:500:10:360:-25.5149,0,-38.1115	0/0:134:134,0:134:4713:0:0:0,-40.338,-424.328	0/0:143:140,2:140:4943:2:72:0,-36.2694,-438.186	0/1:10:1,9:1:36:9:324:-26.4956,0,-0.587975	0/0:98:98,0:98:3493:0:0:0,-29.5009,-314.58	0/1:123:59,64:59:2112:64:2286:-168.96,0,-153.322	0/1:83:42,41:42:1497:41:1468:-107.431,0,-110.037	0/0:77:77,0:77:2695:0:0:0,-23.1793,-242.792	0/0:137:137,0:137:4854:0:0:0,-41.2411,-437.016	0/1:97:23,74:23:824:74:2637:-208.376,0,-45.2834	0/0:108:108,0:108:3849:0:0:0,-32.5112,-346.604	0/1:69:34,35:34:1212:35:1256:-92.5742,0,-88.6153	0/0:82:82,0:82:2899:0:0:0,-24.6845,-261.112	0/1:39:24,15:24:856:15:536:-36.8346,0,-65.6209	0/1:71:44,27:44:1545:27:960:-65.3431,0,-117.92	0/1:79:50,29:50:1784:29:1044:-70.4934,0,-137.061	0/0:191:191,0:191:6783:0:0:0,-57.4967,-610.412	0/1:163:89,74:89:3181:74:2652:-189.858,0,-237.445	0/1:154:57,97:57:1927:97:3468:-265.974,0,-127.336	0/1:92:47,45:47:1658:45:1608:-117.315,0,-121.809	0/0:24:24,0:24:844:0:0:0,-7.22472,-76.2789	0/1:85:60,25:60:2110:25:900:-55.7335,0,-164.578	0/0:148:148,0:148:5121:0:0:0,-44.5524,-461.028	0/0:164:163,0:163:5798:0:0:0,-49.0679,-521.57	0/1:70:42,28:42:1500:28:1004:-69.6014,0,-114.222	0/0:117:117,0:117:4162:0:0:0,-35.2205,-374.762	0/1:75:45,30:45:1601:30:1064:-73.4938,0,-121.801	0/1:130:79,51:79:2832:51:1828:-125.667,0,-215.976	0/1:19:13,6:13:464:6:212:-13.7052,0,-36.3779	0/0:84:84,0:84:3001:0:0:0,-25.2865,-270.32	0/0:90:87,2:87:3082:2:72:0,-20.3148,-270.77	0/1:120:69,51:69:2468:51:1824:-128.318,0,-186.247	0/1:190:113,77:113:4022:77:2772:-192.525,0,-304.971	0/1:96:39,57:39:1384:57:2044:-155.333,0,-95.96	0/0:124:124,0:124:4417:0:0:0,-37.3277,-397.703	0/0:160:160,0:160:5663:0:0:0,-48.1648,-509.79
chr01	35501319	.	T	C	146864	PASS	AB=0.520626;ABP=15.2826;AC=144;AF=0.765957;AN=188;AO=6823;CIGAR=1X;DP=8429;DPB=8429;DPRA=0;EPP=14810.3;EPPR=3477.37;GTI=2;LEN=1;MEANALT=1.06383;MQM=59.9505;MQMR=59.9094;NS=94;NUMALT=1;ODDS=2.99011;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243664;QR=56833;RO=1600;RPL=0;RPP=14819;RPPR=3477.37;RPR=6823;RUN=1;SAF=6822;SAP=14810.3;SAR=1;SRF=1600;SRP=3477.37;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:37,30:37:1316:30:1068:-75.9613,0,-98.2714	0/1:60:22,38:22:769:38:1368:-105.359,0,-51.4561	1/1:147:0,147:0:0:147:5240:-471.74,-44.2514,0	1/1:139:1,138:1:36:138:4910:-438.453,-38.2449,0	0/1:37:13,24:13:452:24:852:-65.8623,0,-29.873	0/1:41:25,16:25:892:16:572:-39.4712,0,-68.2575	1/1:105:0,105:0:0:105:3763:-338.869,-31.6082,0	1/1:95:0,95:0:0:95:3361:-302.701,-28.5979,0	0/1:117:64,52:64:2219:52:1860:-132.509,0,-164.174	0/1:71:50,21:50:1776:21:740:-45.545,0,-138.75	1/1:145:0,145:0:0:145:5176:-465.977,-43.6494,0	1/1:132:0,132:0:0:132:4736:-426.389,-39.736,0	1/1:123:0,123:0:0:123:4372:-393.654,-37.0267,0	0/1:83:32,51:32:1144:51:1824:-139.456,0,-78.284	1/1:102:0,102:0:0:102:3654:-329.063,-30.7051,0	1/1:111:0,111:0:0:111:3972:-357.671,-33.4143,0	1/1:68:0,68:0:0:68:2423:-218.326,-20.47,0	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:65:0,65:0:0:65:2308:-207.981,-19.567,0	0/1:115:59,55:59:2120:55:1970:-143.02,0,-156.514	1/1:155:0,155:0:0:155:5544:-499.066,-46.6597,0	1/1:43:0,43:0:0:43:1536:-138.533,-12.9443,0	1/1:92:1,91:1:36:91:3252:-289.275,-24.0965,0	0/1:35:12,23:12:428:23:824:-63.9473,0,-28.1922	1/1:99:0,99:0:0:99:3528:-317.729,-29.802,0	1/1:193:1,192:1:36:192:6884:-616.029,-54.5005,0	0/1:190:91,99:91:3260:99:3548:-262.333,0,-236.425	1/1:34:0,34:0:0:34:1208:-109.024,-10.235,0	1/1:187:0,187:0:0:187:6695:-602.62,-56.2926,0	1/1:75:0,75:0:0:75:2677:-241.174,-22.5773,0	1/1:92:0,92:0:0:92:3284:-295.78,-27.6948,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	0/1:23:11,12:11:388:12:428:-31.9351,0,-28.3337	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:23:9,14:9:316:14:504:-38.7744,0,-21.8552	1/1:225:0,224:0:0:224:8022:-721.632,-67.4307,0	0/1:67:27,40:27:964:40:1436:-109.368,0,-66.9078	0/1:102:48,54:48:1703:54:1921:-142.452,0,-122.757	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	1/1:81:1,80:1:36:80:2868:-254.759,-20.7852,0	0/1:56:17,39:17:612:39:1388:-108.361,0,-38.5558	1/1:168:0,168:0:0:168:6004:-540.092,-50.573,0	1/1:73:0,73:0:0:73:2624:-236.407,-21.9752,0	0/1:57:31,26:31:1089:26:919:-65.8672,0,-81.1586	0/1:99:51,48:51:1790:48:1720:-125.284,0,-131.576	1/1:91:1,89:1:36:89:3187:-283.474,-23.8343,0	1/1:105:2,103:2:72:103:3664:-323.129,-24.7714,0	1/1:83:0,83:0:0:83:2976:-268.065,-24.9855,0	0/1:90:42,48:42:1504:48:1696:-125.829,0,-108.562	0/1:80:42,38:42:1504:38:1360:-98.6182,0,-111.572	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:128:58,70:58:2072:70:2485:-185.372,0,-148.213	1/1:47:0,47:0:0:47:1662:-149.864,-14.1484,0	1/1:20:0,20:0:0:20:716:-64.7654,-6.0206,0	1/1:121:0,121:0:0:121:4293:-386.548,-36.4246,0	1/1:51:0,51:0:0:51:1820:-164.081,-15.3525,0	0/1:16:6,10:6:212:10:352:-27.2017,0,-14.6079	0/1:25:9,16:9:320:16:561:-43.2922,0,-21.612	1/1:141:0,141:0:0:141:5049:-454.552,-42.4452,0	1/1:128:2,126:2:72:126:4492:-397.612,-31.6951,0	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	1/1:78:0,78:0:0:78:2780:-250.442,-23.4803,0	0/1:114:60,54:60:2129:54:1936:-140.199,0,-157.557	0/1:83:42,41:42:1508:41:1464:-107.071,0,-111.029	1/1:75:0,75:0:0:75:2696:-242.884,-22.5773,0	1/1:136:0,136:0:0:136:4848:-436.476,-40.9401,0	0/1:95:75,20:75:2631:20:720:-36.5309,0,-208.436	1/1:104:0,104:0:0:104:3712:-334.281,-31.3071,0	0/1:68:36,32:36:1281:32:1148:-83.1598,0,-95.1212	1/1:72:0,72:0:0:72:2566:-231.16,-21.6742,0	0/1:40:15,25:15:540:25:888:-68.1978,0,-36.8953	0/1:72:26,46:26:932:46:1636:-125.808,0,-62.4889	0/1:79:29,50:29:1040:50:1788:-137.421,0,-70.133	1/1:190:0,190:0:0:190:6777:-609.946,-57.1957,0	0/1:160:73,87:73:2620:87:3124:-233.221,0,-187.882	0/1:149:90,59:90:3139:59:2079:-142.525,0,-237.883	0/1:90:46,44:46:1640:44:1576:-115.039,0,-120.796	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	0/1:83:28,55:28:1004:55:1980:-153.488,0,-65.6842	1/1:149:0,149:0:0:149:5309:-477.937,-44.8535,0	1/1:150:0,150:0:0:150:5333:-480.102,-45.1545,0	0/1:63:28,35:28:993:35:1237:-92.6674,0,-70.7153	1/1:109:0,109:0:0:109:3884:-349.756,-32.8123,0	0/1:72:30,42:30:1044:42:1508:-114.34,0,-72.5922	0/1:125:52,73:52:1849:73:2616:-198.051,0,-129.059	0/1:17:7,10:7:228:10:360:-27.6268,0,-15.7201	1/1:77:0,77:0:0:77:2754:-248.102,-23.1793,0	1/1:84:2,81:2:72:81:2908:-255.118,-18.5086,0	0/1:118:50,68:50:1792:68:2435:-183.88,0,-126.041	0/1:192:76,116:76:2709:116:4148:-315.705,0,-186.255	0/1:93:54,39:54:1932:39:1379:-96.4122,0,-146.161	1/1:111:0,111:0:0:111:3976:-358.03,-33.4143,0	1/1:151:0,151:0:0:151:5403:-486.388,-45.4555,0
chr01	35625836	.	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chr01	35626007	.	A	C	28999.3	PASS	AB=0.463764;ABP=46.759;AC=43;AF=0.228723;AN=188;AO=1785;CIGAR=1X;DP=9583;DPB=9583;DPRA=0.865581;EPP=3879.09;EPPR=16912.3;GTI=2;LEN=1;MEANALT=1.02174;MQM=60;MQMR=59.9991;NS=94;NUMALT=1;ODDS=1.215;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63891;QR=278886;RO=7787;RPL=1785;RPP=3879.09;RPPR=16912.3;RPR=0;RUN=1;SAF=0;SAP=3879.09;SAR=1785;SRF=0;SRP=16912.3;SRR=7787;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:31,19:31:1108:19:680:-46.4777,0,-84.9795	0/1:79:44,35:44:1580:35:1256:-89.5639,0,-118.71	0/0:196:194,0:194:6968:0:0:0,-58.3998,-626.881	0/0:229:226,0:226:8108:0:0:0,-68.0328,-729.374	0/1:15:11,4:11:392:4:140:-8.42913,0,-31.1046	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.161	0/0:123:123,0:123:4386:0:0:0,-37.0267,-394.911	0/1:115:84,31:84:2985:31:1112:-65.7729,0,-234.263	0/1:92:46,46:46:1644:46:1637:-119.923,0,-120.554	0/0:94:94,0:94:3372:0:0:0,-28.2968,-303.695	0/0:145:145,0:145:5187:0:0:0,-43.6493,-466.969	0/0:108:108,0:108:3880:0:0:0,-32.5112,-349.393	0/1:96:42,54:42:1512:54:1944:-146.337,0,-107.476	0/0:111:111,0:111:3988:0:0:0,-33.4143,-359.109	0/0:95:95,0:95:3385:0:0:0,-28.5978,-304.865	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.847	0/0:49:49,0:49:1748:0:0:0,-14.7505,-157.604	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:194:120,74:120:4297:74:2641:-179.535,0,-328.505	0/0:102:102,0:102:3668:0:0:0,-30.7051,-330.322	0/0:135:135,0:135:4848:0:0:0,-40.639,-436.472	0/0:203:200,3:200:7153:3:108:0,-51.0339,-633.751	0/1:52:38,14:38:1364:14:500:-29.6826,0,-107.407	0/0:107:107,0:107:3821:0:0:0,-32.2102,-344.086	0/0:272:272,0:272:9748:0:0:0,-81.8802,-877.266	0/1:276:156,120:156:5588:120:4258:-300.315,0,-419.958	0/0:44:44,0:44:1569:0:0:0,-13.2453,-141.5	0/0:247:247,0:247:8864:0:0:0,-74.3544,-797.742	0/0:105:105,0:105:3733:0:0:0,-31.6081,-336.171	0/0:126:126,0:126:4520:0:0:0,-37.9298,-406.967	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:27:12,15:12:417:15:540:-40.8087,0,-29.7324	0/1:11:2,9:2:68:9:320:-25.831,0,-3.14638	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:51:21,30:21:756:30:1076:-81.8003,0,-53.0147	0/0:214:214,0:214:7671:0:0:0,-64.4204,-690.423	0/1:80:44,36:44:1580:36:1296:-92.8615,0,-118.409	0/1:73:37,36:37:1332:36:1273:-92.8957,0,-98.2072	0/1:5:2,3:2:72:3:104:-8.19766,0,-5.33157	0/0:116:116,0:116:4168:0:0:0,-34.9195,-375.301	0/1:50:22,28:22:773:28:1004:-75.6244,0,-54.838	0/0:164:164,0:164:5868:0:0:0,-49.3689,-528.231	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/1:82:39,43:39:1400:43:1540:-114.209,0,-101.615	0/1:72:44,28:44:1580:28:1008:-69.3622,0,-120.817	0/0:135:135,0:135:4836:0:0:0,-40.639,-435.394	0/0:144:144,0:144:5156:0:0:0,-43.3483,-464.181	0/0:110:110,0:110:3913:0:0:0,-33.1133,-352.364	0/1:140:60,80:60:2137:80:2865:-215.941,0,-150.452	0/1:69:39,30:39:1389:30:1080:-76.7422,0,-104.536	0/1:17:7,10:7:252:10:353:-26.9915,0,-17.9114	0/1:172:97,75:97:3488:75:2642:-186.248,0,-262.353	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:169:168,0:168:6008:0:0:0,-50.573,-540.506	0/0:28:28,0:28:992:0:0:0,-8.42884,-89.5944	0/1:15:10,5:10:360:5:180:-12.0366,0,-28.2289	0/1:17:15,2:15:532:2:72:-1.71921,0,-43.0956	0/0:78:77,0:77:2760:0:0:0,-23.1793,-248.282	0/0:110:108,2:108:3868:2:72:0,-26.2766,-341.478	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/0:204:204,0:204:7320:0:0:0,-61.4101,-658.847	0/1:148:80,68:80:2868:68:2429:-174.311,0,-213.804	0/1:43:28,15:28:1004:15:540:-35.9922,0,-77.7316	0/0:91:91,0:91:3268:0:0:0,-27.3937,-294.34	0/0:196:195,1:195:6984:1:36:0,-55.4036,-625.025	0/1:268:123,145:123:4389:145:5200:-387.462,0,-314.507	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/1:66:32,34:32:1148:34:1224:-90.5991,0,-83.7619	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.161	0/1:33:17,16:17:600:16:572:-41.8794,0,-44.3952	0/1:113:51,62:51:1832:62:2232:-167.127,0,-131.144	0/1:93:50,43:50:1792:43:1540:-110.897,0,-133.567	0/0:113:111,0:111:3964:0:0:0,-33.4143,-356.592	0/1:188:117,71:117:4192:71:2552:-173.336,0,-320.868	0/1:93:77,16:77:2764:16:568:-23.4561,0,-221.005	0/1:130:68,62:68:2448:62:2213:-160.299,0,-181.44	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:116:68,48:68:2444:48:1728:-120.886,0,-185.295	0/0:115:115,0:115:4124:0:0:0,-34.6184,-371.344	0/0:274:274,0:274:9793:0:0:0,-82.4822,-881.316	0/1:85:40,45:40:1425:45:1612:-119.783,0,-102.958	0/0:98:98,0:98:3505:0:0:0,-29.5009,-315.659	0/1:66:31,35:31:1112:35:1260:-93.8375,0,-80.5234	0/1:146:75,71:75:2685:71:2552:-185.98,0,-197.943	0/1:29:17,12:17:612:12:432:-30.4913,0,-46.6836	0/0:72:72,0:72:2576:0:0:0,-21.6742,-232.09	0/0:96:96,0:96:3443:0:0:0,-28.8989,-310.082	0/1:82:36,45:36:1288:45:1612:-120.627,0,-91.4804	0/1:174:79,95:79:2840:95:3408:-254.555,0,-203.458	0/1:103:39,64:39:1400:64:2300:-176.255,0,-95.2931	0/0:132:132,0:132:4721:0:0:0,-39.736,-425.048	0/0:148:147,0:147:5257:0:0:0,-44.2514,-472.906
chr01	35703051	.	A	G	39457.3	PASS	AB=0.560506;ABP=123.624;AC=44;AF=0.234043;AN=188;AO=2139;CIGAR=1X;DP=8538;DPB=8538;DPRA=0.969216;EPP=348.059;EPPR=341.053;GTI=0;LEN=1;MEANALT=1;MQM=34.352;MQMR=52.6468;NS=94;NUMALT=1;ODDS=2.87508;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76317;QR=226525;RO=6398;RPL=22;RPP=4458.67;RPPR=13473.7;RPR=2117;RUN=1;SAF=1383;SAP=402.107;SAR=756;SRF=3747;SRP=410.701;SRR=2651;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:19:11,8:11:396:8:273:-13.6026,0,-29.4353	0/1:140:59,81:59:2108:81:2896:-157.992,0,-147.611	0/0:77:77,0:77:2698:0:0:0,-23.1793,-242.213	0/0:175:175,0:175:6207:0:0:0,-52.6802,-555.908	0/1:40:23,17:23:828:17:600:-33.9725,0,-62.422	0/1:43:20,23:20:720:23:824:-43.895,0,-52.1174	0/0:172:172,0:172:6067:0:0:0,-51.7772,-543.51	0/0:95:95,0:95:3349:0:0:0,-28.5978,-301.222	0/1:47:22,25:22:792:25:896:-47.616,0,-57.3835	0/1:113:54,59:54:1908:59:2103:-130.355,0,-136.664	0/0:75:75,0:75:2680:0:0:0,-22.5772,-240.267	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.229	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.4932	0/1:121:64,57:64:2284:57:2048:-116.715,0,-168.34	0/0:83:83,0:83:2933:0:0:0,-24.9855,-262.846	0/0:60:60,0:60:2160:0:0:0,-18.0618,-193.786	0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.223	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.246	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.4708	0/1:207:90,117:90:3176:117:4174:-272.154,0,-222.373	0/0:137:137,0:137:4773:0:0:0,-41.2411,-426.673	0/0:49:49,0:49:1747:0:0:0,-14.7505,-157.106	0/0:77:77,0:77:2728:0:0:0,-23.1793,-244.202	0/1:125:54,71:54:1879:71:2540:-160.21,0,-129.658	0/0:94:93,0:93:3300:0:0:0,-27.9958,-294.161	0/0:287:287,0:287:10151:0:0:0,-86.3956,-911.131	0/1:320:149,171:149:5261:171:6104:-379.811,0,-374.055	0/0:38:38,0:38:1356:0:0:0,-11.4391,-121.725	0/0:241:241,0:241:8549:0:0:0,-72.5482,-767.358	0/0:118:115,3:115:4060:3:108:0,-25.5857,-353.981	0/0:108:108,0:108:3790:0:0:0,-32.5112,-339.344	0/0:11:11,0:11:388:0:0:0,-3.31133,-35.079	0/1:25:4,21:4:136:21:752:-54.7049,0,-4.99262	0/1:5:2,3:2:72:3:108:-6.15622,0,-5.32453	0/0:5:5,0:5:168:0:0:0,-1.50515,-15.438	0/1:4:3,1:3:108:1:36:-1.53208,0,-8.75785	0/0:211:211,0:211:7506:0:0:0,-63.5173,-673.76	0/1:121:51,70:51:1785:70:2492:-158.046,0,-124.049	0/1:41:16,25:16:557:25:896:-48.835,0,-37.965	0/1:6:3,3:3:108:3:104:-7.78457,0,-8.23628	0/0:146:143,3:143:5060:3:108:0,-36.289,-445.143	0/1:47:15,32:15:540:32:1144:-73.3237,0,-34.5981	0/0:152:152,0:152:5377:0:0:0,-45.7566,-480.592	0/0:68:68,0:68:2401:0:0:0,-20.47,-215.627	0/1:80:36,44:36:1280:44:1572:-99.0722,0,-90.8343	0/1:114:46,68:46:1624:68:2425:-169.393,0,-111.858	0/0:69:69,0:69:2448:0:0:0,-20.7711,-219.781	0/0:153:153,0:153:5416:0:0:0,-46.0576,-484.367	0/0:81:81,0:81:2892:0:0:0,-24.3834,-259.522	0/1:158:69,89:69:2426:89:3189:-201.833,0,-170.66	0/1:160:68,92:68:2409:92:3288:-226.119,0,-167.861	0/1:13:8,5:8:275:5:180:-10.6275,0,-21.1559	0/1:58:32,26:32:1113:26:932:-47.2282,0,-82.9249	0/0:51:51,0:51:1787:0:0:0,-15.3525,-160.692	0/0:10:10,0:10:348:0:0:0,-3.0103,-31.6275	0/0:139:139,0:139:4893:0:0:0,-41.8432,-437.238	0/0:55:55,0:55:1943:0:0:0,-16.5566,-174.199	0/1:17:3,14:3:108:14:504:-38.0438,0,-4.93233	0/1:19:8,11:8:275:11:396:-27.1767,0,-19.2588	0/0:83:83,0:83:2952:0:0:0,-24.9855,-263.55	0/0:107:104,3:104:3678:3:108:0,-24.0825,-320.794	0/1:9:3,6:3:108:6:201:-13.0401,0,-7.34685	0/0:137:137,0:137:4862:0:0:0,-41.2411,-436.733	0/1:208:92,116:92:3280:116:4143:-254.575,0,-231.76	0/1:101:43,58:43:1532:58:2072:-120.043,0,-107.362	0/0:77:77,0:77:2706:0:0:0,-23.1793,-242.344	0/0:137:134,3:134:4732:3:104:0,-31.6504,-413.989	0/1:117:32,85:32:1140:85:3018:-206.326,0,-66.9	0/0:57:57,0:57:2020:0:0:0,-17.1587,-181.35	0/1:39:15,24:15:520:24:864:-47.7122,0,-34.8578	0/0:75:75,0:75:2680:0:0:0,-22.5772,-241.09	0/1:43:17,26:17:596:26:932:-58.5756,0,-40.7884	0/1:78:38,40:38:1340:40:1402:-73.1689,0,-97.3018	0/1:47:24,23:24:856:23:824:-42.6116,0,-63.0333	0/0:203:203,0:203:7146:0:0:0,-61.1091,-640.664	0/1:137:68,69:68:2409:69:2440:-159.128,0,-175.308	0/1:89:33,56:33:1152:56:1993:-110.672,0,-77.0026	0/1:104:35,69:35:1217:69:2459:-138.48,0,-78.3215	0/0:15:15,0:15:528:0:0:0,-4.51545,-47.807	0/1:119:49,70:49:1728:70:2504:-158.086,0,-119.378	0/0:52:52,0:52:1844:0:0:0,-15.6536,-165.874	0/0:202:202,0:202:7130:0:0:0,-60.8081,-638.225	0/1:101:48,53:48:1724:53:1896:-116.781,0,-124.582	0/0:83:82,1:82:2936:1:36:0,-21.437,-259.781	0/1:82:37,45:37:1303:45:1590:-95.0607,0,-92.3838	0/1:158:73,85:73:2612:85:3040:-192.74,0,-187.17	0/1:21:12,9:12:428:9:324:-16.1152,0,-32.5022	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.727	0/0:35:35,0:35:1248:0:0:0,-10.536,-112.517	0/1:66:36,30:36:1280:30:1068:-59.8724,0,-94.4146	0/1:120:66,54:66:2352:54:1940:-109.833,0,-174.68	0/1:111:36,75:36:1275:75:2667:-184.136,0,-80.6684	0/0:90:90,0:90:3204:0:0:0,-27.0927,-287.216	0/0:152:152,0:152:5412:0:0:0,-45.7566,-484.651
chr02	250267	.	T	C	143352	PASS	AB=0.566192;ABP=91.2635;AC=158;AF=0.840426;AN=188;AO=6524;CIGAR=1X;DP=7543;DPB=7543;DPRA=0;EPP=14143.7;EPPR=2200.55;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9801;MQMR=60;NS=94;NUMALT=1;ODDS=11.674;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=232967;QR=36205;RO=1016;RPL=3;RPP=14143.7;RPPR=2200.55;RPR=6521;RUN=1;SAF=6524;SAP=14169.7;SAR=0;SRF=1016;SRP=2209.23;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:61:0,61:0:0:61:2177:-196.195,-18.3628,0	1/1:79:0,79:0:0:79:2816:-253.68,-23.7814,0	0/1:138:61,77:61:2173:77:2752:-206.38,0,-154.293	0/1:208:91,117:91:3241:117:4156:-311.608,0,-229.297	1/1:46:0,46:0:0:46:1640:-147.889,-13.8474,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:61:1,60:1:36:60:2121:-187.559,-14.7646,0	1/1:105:0,105:0:0:105:3700:-333.199,-31.6082,0	1/1:73:0,73:0:0:73:2584:-232.808,-21.9752,0	1/1:74:0,74:0:0:74:2636:-237.487,-22.2762,0	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	1/1:69:0,69:0:0:69:2454:-221.114,-20.7711,0	1/1:49:0,49:0:0:49:1764:-159.044,-14.7505,0	0/1:29:18,11:18:648:11:377:-25.5289,0,-49.922	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	0/1:30:13,17:13:468:17:608:-46.0211,0,-33.4287	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	0/1:159:61,98:61:2173:98:3507:-267.976,0,-147.971	0/1:137:46,91:46:1587:91:3263:-252.648,0,-101.872	1/1:119:0,119:0:0:119:4265:-383.755,-35.8226,0	1/1:93:0,92:0:0:92:3292:-296.139,-27.6948,0	1/1:73:3,70:3:108:70:2499:-215.087,-11.9,0	1/1:78:0,78:0:0:78:2786:-250.977,-23.4803,0	1/1:268:0,268:0:0:268:9584:-862.514,-80.676,0	1/1:105:1,104:1:36:104:3707:-330.232,-28.0099,0	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	1/1:277:0,277:0:0:277:9873:-888.513,-83.3853,0	1/1:110:2,108:2:72:108:3857:-340.488,-26.2766,0	1/1:105:0,105:0:0:105:3739:-336.712,-31.6082,0	0/1:17:8,9:8:288:9:313:-23.3876,0,-21.1499	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:11:0,11:0:0:11:384:-34.8947,-3.31133,0	0/1:23:9,14:9:324:14:496:-38.0506,0,-22.5822	1/1:133:0,133:0:0:133:4764:-428.917,-40.037,0	0/1:120:50,70:50:1788:70:2508:-189.849,0,-125.079	0/1:20:10,10:10:348:10:360:-26.7237,0,-25.6345	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:219:0,219:0:0:219:7824:-704.189,-65.9256,0	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	0/1:146:55,91:55:1961:91:3238:-247.691,0,-132.813	0/1:37:25,12:25:900:12:432:-28.0831,0,-70.1829	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:104:46,58:46:1629:58:2067:-154.993,0,-115.59	0/1:84:44,40:44:1584:40:1423:-103.08,0,-117.565	1/1:157:0,157:0:0:157:5628:-506.626,-47.2617,0	1/1:115:0,115:0:0:115:4132:-372.062,-34.6185,0	1/1:122:0,121:0:0:121:4311:-387.805,-36.4246,0	1/1:135:0,135:0:0:135:4814:-433.414,-40.6391,0	1/1:17:0,17:0:0:17:591:-53.5147,-5.11751,0	0/1:163:85,78:85:3048:78:2760:-199.57,0,-225.481	0/1:40:14,26:14:489:26:936:-72.5183,0,-32.2977	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:157:0,157:0:0:157:5600:-504.12,-47.2617,0	0/1:49:16,33:16:576:33:1173:-91.1251,0,-37.4245	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:56:0,56:0:0:56:2008:-180.993,-16.8577,0	1/1:62:1,61:1:36:61:2188:-193.587,-15.0656,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:223:1,222:1:36:222:7928:-709.915,-63.5314,0	1/1:190:0,190:0:0:190:6801:-612.161,-57.1957,0	0/1:70:34,36:34:1205:36:1296:-95.8718,0,-87.6818	1/1:82:0,82:0:0:82:2932:-264.115,-24.6845,0	0/1:136:41,95:41:1457:95:3382:-263.653,0,-90.4839	1/1:149:0,149:0:0:149:5327:-479.564,-44.8535,0	0/1:24:16,8:16:576:8:288:-19.0427,0,-44.9503	1/1:68:0,68:0:0:68:2440:-219.855,-20.47,0	0/1:31:13,18:13:468:18:648:-49.32,0,-33.1277	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:188:0,187:0:0:187:6688:-601.675,-56.2926,0	1/1:95:0,95:0:0:95:3364:-302.918,-28.5979,0	1/1:121:0,121:0:0:121:4317:-388.706,-36.4246,0	1/1:193:0,193:0:0:193:6924:-623.225,-58.0988,0	0/1:65:32,33:32:1144:33:1161:-85.2278,0,-83.7026	1/1:90:1,89:1:36:89:3176:-282.467,-23.4944,0	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	1/1:102:0,102:0:0:102:3640:-327.803,-30.7051,0	0/1:59:17,42:17:612:42:1491:-116.723,0,-37.6527	0/1:185:63,122:63:2249:122:4349:-335.894,0,-146.981	0/1:32:20,12:20:701:12:432:-29.5882,0,-53.7788	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	0/1:31:18,13:18:648:13:468:-33.1277,0,-49.32	0/1:83:39,44:39:1388:44:1570:-116.602,0,-100.233	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	1/1:51:0,51:0:0:51:1836:-165.521,-15.3525,0	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	1/1:15:0,15:0:0:15:521:-47.2163,-4.51545,0	0/1:44:24,20:24:852:20:720:-51.8835,0,-63.7551	0/1:45:32,13:32:1140:13:464:-28.5512,0,-89.3629	1/1:146:0,146:0:0:146:5213:-469.308,-43.9504,0	1/1:54:0,54:0:0:54:1936:-174.516,-16.2556,0
chr02	620635	.	G	A	17845.6	PASS	AB=0.482374;ABP=9.05767;AC=25;AF=0.132979;AN=188;AO=1089;CIGAR=1X;DP=7435;DPB=7435;DPRA=1.26611;EPP=2367.74;EPPR=13770.1;GTI=1;LEN=1;MEANALT=1.12903;MQM=59.798;MQMR=59.9896;NS=94;NUMALT=1;ODDS=0.591115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38892;QR=226025;RO=6340;RPL=0;RPP=2367.74;RPPR=13770.1;RPR=1089;RUN=1;SAF=1089;SAP=2367.74;SAR=0;SRF=6340;SRP=13770.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:77:77,0:77:2733:0:0:0,-23.1793,-246.212	0/0:59:59,0:59:2078:0:0:0,-17.7608,-187.287	0/0:62:62,0:62:2217:0:0:0,-18.6639,-199.793	0/1:165:63,102:63:2213:102:3628:-277.042,0,-149.761	0/0:69:69,0:69:2450:0:0:0,-20.7711,-220.752	0/0:53:53,0:53:1892:0:0:0,-15.9546,-170.558	0/0:41:41,0:41:1457:0:0:0,-12.3422,-131.424	0/0:105:105,0:105:3756:0:0:0,-31.6081,-338.24	0/0:106:106,0:106:3770:0:0:0,-31.9092,-339.498	0/0:116:116,0:116:4157:0:0:0,-34.9195,-374.306	0/0:54:54,0:54:1909:0:0:0,-16.2556,-172.086	0/0:95:95,0:95:3404:0:0:0,-28.5978,-306.574	0/0:76:76,0:76:2694:0:0:0,-22.8783,-242.702	0/1:69:31,38:31:1108:38:1364:-102.29,0,-79.2599	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/1:65:33,32:33:1188:32:1137:-83.0654,0,-87.6616	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:34:34,0:34:1205:0:0:0,-10.235,-108.754	0/1:141:69,72:69:2476:72:2565:-188.653,0,-180.648	0/1:130:77,53:77:2730:53:1908:-132.85,0,-206.807	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/0:142:140,1:140:4960:1:36:0,-39.1319,-443.021	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:231:231,0:231:8212:0:0:0,-69.5379,-739.093	0/0:149:148,0:148:5277:0:0:0,-44.5524,-474.707	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/0:106:106,0:106:3785:0:0:0,-31.9092,-340.848	0/0:110:110,0:110:3948:0:0:0,-33.1133,-355.511	0/1:94:59,35:59:2112:35:1237:-83.3308,0,-162.052	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:191:191,0:191:6844:0:0:0,-57.4967,-616.029	0/1:91:56,34:56:2001:34:1220:-82.5107,0,-152.909	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/0:4:4,0:4:135:0:0:0,-1.20412,-12.4825	0/0:132:132,0:132:4714:0:0:0,-39.736,-424.417	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/1:127:74,53:74:2629:53:1885:-131.609,0,-198.626	0/1:90:49,41:49:1752:41:1464:-104.963,0,-130.871	0/1:60:36,24:36:1279:24:860:-59.66,0,-97.3506	0/1:90:50,40:50:1777:40:1409:-100.009,0,-133.118	0/0:65:65,0:65:2324:0:0:0,-19.5669,-209.42	0/0:144:144,0:144:5119:0:0:0,-43.3483,-460.851	0/0:77:77,0:77:2726:0:0:0,-23.1793,-245.581	0/0:77:77,0:77:2745:0:0:0,-23.1793,-247.291	0/0:30:30,0:30:1065:0:0:0,-9.0309,-96.1598	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:80:79,1:79:2806:1:36:0,-20.5797,-249.275	0/1:47:24,22:24:852:22:788:-57.0364,0,-62.7934	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:116:116,0:116:4130:0:0:0,-34.9195,-371.873	0/1:26:15,11:15:540:11:396:-28.156,0,-41.1098	0/1:21:12,9:12:424:9:320:-22.8207,0,-32.1748	0/0:16:16,0:16:542:0:0:0,-4.81648,-48.9394	0/0:77:77,0:77:2768:0:0:0,-23.1793,-249.361	0/1:108:45,63:45:1608:63:2268:-171.866,0,-112.499	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:194:194,0:194:6942:0:0:0,-58.3998,-624.842	0/0:132:129,3:129:4609:3:108:0,-29.6608,-404.898	0/1:54:48,6:48:1720:6:216:-3.53489,0,-138.83	0/0:74:73,1:73:2597:1:36:0,-18.6779,-230.379	0/1:153:86,66:86:3054:66:2360:-166.542,0,-228.971	0/0:127:127,0:127:4541:0:0:0,-38.2308,-408.855	0/1:63:32,31:32:1135:31:1112:-81.4172,0,-83.4932	0/0:38:38,0:38:1353:0:0:0,-11.4391,-122.064	0/1:54:27,27:27:972:27:972:-71.5414,0,-71.5423	0/0:34:34,0:34:1182:0:0:0,-10.235,-106.681	0/0:128:128,0:128:4596:0:0:0,-38.5318,-413.803	0/0:74:74,0:74:2644:0:0:0,-22.2762,-238.207	0/0:155:155,0:155:5530:0:0:0,-46.6596,-497.824	0/0:208:207,0:207:7413:0:0:0,-62.3132,-666.854	0/0:58:58,0:58:2016:0:0:0,-17.4597,-181.706	0/0:96:96,0:96:3425:0:0:0,-28.8989,-308.463	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/0:133:133,0:133:4704:0:0:0,-40.037,-423.519	0/0:50:50,0:50:1751:0:0:0,-15.0515,-157.868	0/1:143:76,67:76:2713:67:2385:-171.854,0,-201.365	0/1:58:25,33:25:881:33:1184:-89.4086,0,-62.1461	0/0:62:61,1:61:2165:1:36:0,-15.0656,-191.517	0/1:46:22,24:22:792:24:860:-63.8674,0,-57.7583	0/1:138:61,77:61:2180:77:2741:-205.389,0,-154.924	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:83:83,0:83:2949:0:0:0,-24.9855,-265.626	0/0:83:83,0:83:2984:0:0:0,-24.9855,-268.791	0/0:55:55,0:55:1963:0:0:0,-16.5566,-176.94	0/1:106:53,53:53:1892:53:1900:-139.364,0,-138.649	0/1:102:34,68:34:1208:68:2425:-187.797,0,-78.321	0/0:125:125,0:125:4468:0:0:0,-37.6287,-402.291	0/0:123:122,1:122:4331:1:36:0,-33.431,-386.368
chr02	620660	.	C	A	17833.2	PASS	AB=0.476338;ABP=14.006;AC=25;AF=0.132979;AN=188;AO=1086;CIGAR=1X;DP=7508;DPB=7508;DPRA=1.40044;EPP=2352.55;EPPR=13883.1;GTI=1;LEN=1;MEANALT=1.03125;MQM=59.7864;MQMR=59.9796;NS=94;NUMALT=1;ODDS=1.2437;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38931;QR=229460;RO=6420;RPL=1085;RPP=2352.55;RPPR=13883.1;RPR=1;RUN=1;SAF=1086;SAP=2361.23;SAR=0;SRF=6420;SRP=13943.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:78:78,0:78:2778:0:0:0,-23.4803,-250.26	0/0:59:59,0:59:2102:0:0:0,-17.7608,-189.448	0/0:63:63,0:63:2268:0:0:0,-18.9649,-204.382	0/1:167:65,102:65:2327:102:3652:-278.583,0,-159.417	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/0:53:53,0:53:1908:0:0:0,-15.9546,-171.998	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/0:108:108,0:108:3842:0:0:0,-32.5112,-345.977	0/0:106:106,0:106:3765:0:0:0,-31.9092,-339.05	0/0:116:116,0:116:4159:0:0:0,-34.9195,-374.487	0/0:57:57,0:57:2020:0:0:0,-17.1587,-182.07	0/0:100:100,0:100:3531:0:0:0,-30.103,-318	0/0:77:77,0:77:2755:0:0:0,-23.1793,-248.191	0/1:68:32,36:32:1152:36:1284:-95.3934,0,-83.5201	0/0:73:72,0:72:2551:0:0:0,-21.6742,-229.479	0/1:67:36,31:36:1296:31:1108:-79.8574,0,-96.7749	0/0:29:29,0:29:1031:0:0:0,-8.72987,-93.1026	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/1:143:71,72:71:2544:72:2580:-189.402,0,-186.163	0/1:132:79,53:79:2823:53:1900:-131.528,0,-214.573	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/0:143:142,1:142:5081:1:36:0,-39.449,-453.833	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:229:229,0:229:8204:0:0:0,-68.9359,-738.372	0/0:151:150,1:150:5392:1:36:0,-41.8573,-481.81	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:106:106,0:106:3796:0:0:0,-31.9092,-341.838	0/0:112:112,0:112:4020:0:0:0,-33.7154,-361.988	0/1:94:60,34:60:2148:34:1224:-82.1679,0,-165.291	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:196:196,0:196:7006:0:0:0,-59.0019,-630.603	0/1:91:57,34:57:2025:34:1220:-82.5722,0,-155.127	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4777	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:133:133,0:133:4754:0:0:0,-40.037,-428.017	0/0:40:40,0:40:1421:0:0:0,-12.0412,-128.185	0/1:125:73,52:73:2611:52:1864:-130.324,0,-197.609	0/1:91:50,41:50:1777:41:1476:-105.742,0,-132.817	0/1:59:35,24:35:1252:24:860:-59.9611,0,-95.2243	0/1:90:49,41:49:1755:41:1468:-105.32,0,-131.141	0/0:64:64,0:64:2287:0:0:0,-19.2659,-206.091	0/0:147:147,0:147:5251:0:0:0,-44.2514,-472.728	0/0:80:80,0:80:2859:0:0:0,-24.0824,-257.547	0/0:77:77,0:77:2764:0:0:0,-23.1793,-249.001	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:79:78,1:78:2762:1:36:0,-20.2787,-245.317	0/1:48:26,22:26:924:22:792:-57.1544,0,-69.0282	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:116:116,0:116:4144:0:0:0,-34.9195,-373.122	0/1:29:18,11:18:640:11:396:-27.2529,0,-49.1994	0/1:21:12,9:12:417:9:324:-23.1842,0,-31.5386	0/0:17:17,0:17:600:0:0:0,-5.11751,-54.2583	0/0:79:79,0:79:2840:0:0:0,-23.7814,-255.838	0/1:110:46,64:46:1652:64:2289:-173.152,0,-115.855	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:196:195,1:195:6987:1:36:0,-55.4284,-625.263	0/0:132:129,3:129:4636:3:108:0,-29.6608,-407.326	0/1:54:48,6:48:1720:6:216:-3.53489,0,-138.83	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/1:155:89,66:89:3169:66:2368:-166.718,0,-238.147	0/0:125:125,0:125:4446:0:0:0,-37.6287,-400.31	0/1:64:33,31:33:1176:31:1105:-80.4887,0,-86.8642	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.17	0/1:55:28,27:28:1004:27:972:-71.2403,0,-74.1192	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/0:127:127,0:127:4530:0:0:0,-38.2308,-407.868	0/0:74:74,0:74:2638:0:0:0,-22.2762,-237.666	0/0:157:157,0:157:5644:0:0:0,-47.2617,-508.077	0/0:210:210,0:210:7500:0:0:0,-63.2163,-675.042	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.709	0/0:96:96,0:96:3443:0:0:0,-28.8989,-310.082	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4777	0/0:135:135,0:135:4827:0:0:0,-40.639,-434.585	0/0:50:50,0:50:1779:0:0:0,-15.0515,-160.392	0/1:144:78,66:78:2800:66:2364:-169.665,0,-208.891	0/1:58:25,33:25:885:33:1180:-89.0483,0,-62.5068	0/0:61:60,1:60:2132:1:36:0,-14.7646,-188.548	0/1:49:25,24:25:891:24:864:-63.3251,0,-65.7583	0/1:138:61,77:61:2181:77:2768:-207.819,0,-155.012	0/0:25:25,0:25:887:0:0:0,-7.52575,-80.1481	0/0:80:80,0:80:2858:0:0:0,-24.0824,-257.454	0/0:82:82,0:82:2912:0:0:0,-24.6845,-262.314	0/0:57:57,0:57:2034:0:0:0,-17.1587,-183.33	0/1:107:53,53:53:1887:53:1904:-139.364,0,-137.839	0/1:102:34,68:34:1216:68:2429:-188.157,0,-79.0415	0/0:129:129,0:129:4582:0:0:0,-38.8329,-412.545	0/0:127:126,1:126:4502:1:36:0,-34.6351,-401.752
chr02	665006	.	C	T	30877.4	PASS	AB=0.330975;ABP=1265.61;AC=58;AF=0.308511;AN=188;AO=2196;CIGAR=1X;DP=9421;DPB=9421;DPRA=2.60347;EPP=4762.88;EPPR=15603;GTI=9;LEN=1;MEANALT=1.03371;MQM=59.918;MQMR=59.9195;NS=94;NUMALT=1;ODDS=1.19657;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78645;QR=257621;RO=7220;RPL=2195;RPP=4762.88;RPPR=15603;RPR=1;RUN=1;SAF=0;SAP=4771.56;SAR=2196;SRF=0;SRP=15681;SRR=7220;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:78:53,25:53:1904:25:874:-55.4932,0,-148.129	0/1:72:45,27:45:1616:27:972:-66.1237,0,-124.042	0/1:157:80,77:80:2853:77:2757:-201.108,0,-209.739	0/0:240:225,13:225:7998:13:468:0,-29.541,-677.384	0/0:36:33,3:33:1175:3:108:0,-0.76191,-95.9818	0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0591	0/0:100:99,1:99:3503:1:36:0,-26.5047,-311.879	0/1:120:76,44:76:2713:44:1576:-106.008,0,-208.289	0/0:35:33,1:33:1180:1:36:0,-6.99657,-102.91	0/0:52:49,3:49:1756:3:108:0,-5.57839,-148.249	0/1:58:40,18:40:1424:18:648:-41.1921,0,-109.976	0/1:140:103,37:103:3677:37:1331:-77.9482,0,-288.988	0/1:135:90,45:90:3219:45:1620:-105.451,0,-249.293	0/0:57:52,5:52:1868:5:180:0,-0.606645,-151.847	0/1:95:81,14:81:2916:14:504:-17.1002,0,-233.947	0/0:68:62,6:62:2220:6:216:0,-0.679527,-180.274	0/0:43:39,4:39:1400:4:140:0,-0.0297638,-113.385	0/0:30:29,1:29:1025:1:36:0,-5.43262,-88.9624	0/1:38:33,5:33:1184:5:180:-5.11293,0,-95.4292	0/0:143:142,1:142:5085:1:36:0,-39.449,-454.193	0/1:114:98,16:98:3493:16:576:-17.8576,0,-279.883	0/1:149:86,63:86:3073:63:2249:-157.819,0,-231.944	0/0:104:101,3:101:3611:3:108:0,-21.2319,-315.12	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.241	0/0:36:33,3:33:1169:3:108:0,-0.76191,-95.4401	0/1:253:183,70:183:6556:70:2516:-150.529,0,-513.958	0/0:175:174,1:174:6231:1:36:0,-49.082,-557.286	0/1:51:46,5:46:1656:5:180:-1.19954,0,-133.976	0/1:387:261,126:261:9314:126:4513:-289.837,0,-721.34	0/0:74:71,3:71:2552:3:108:0,-12.201,-219.855	0/0:103:96,7:96:3410:7:244:0,-8.70738,-284.596	0/1:28:6,22:6:216:22:792:-63.1768,0,-11.3617	0/1:45:11,34:11:381:34:1220:-96.5605,0,-21.0743	1/1:94:0,94:0:0:94:3357:-302.31,-28.2968,0	1/1:90:5,85:5:176:85:3045:-258.093,-10.9077,0	1/1:83:2,81:2:72:81:2904:-254.758,-18.1488,0	0/0:202:200,2:200:7146:2:72:0,-53.9713,-636.359	0/0:91:89,2:89:3185:2:72:0,-20.557,-280.035	0/1:106:66,40:66:2367:40:1432:-97.2684,0,-181.378	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	0/1:292:200,92:200:7119:92:3298:-209.137,0,-552.867	0/1:58:40,18:40:1432:18:648:-41.1921,0,-111.706	0/0:113:106,7:106:3789:7:248:0,-11.3522,-318.543	0/0:60:57,3:57:2036:3:108:0,-7.98663,-173.437	0/0:64:62,2:62:2213:2:72:0,-12.4292,-192.596	0/1:126:99,27:99:3529:27:960:-48.7832,0,-279.693	0/0:80:74,6:74:2660:6:216:0,-4.3027,-219.866	0/0:209:202,7:202:7170:7:252:0,-39.8863,-622.295	0/0:82:81,0:81:2866:0:0:0,-24.3834,-257.816	0/1:177:112,65:112:3990:65:2321:-155.866,0,-306.006	0/0:113:111,2:111:3965:2:72:0,-27.1797,-350.175	1/1:35:0,35:0:0:35:1256:-113.344,-10.5361,0	0/1:323:209,114:209:7443:114:4070:-269.206,0,-572.668	0/0:48:45,3:45:1616:3:108:0,-4.37427,-135.655	0/1:28:4,24:4:144:24:864:-69.6537,0,-4.88478	0/1:235:149,86:149:5348:86:3088:-207.405,0,-410.709	0/1:60:38,22:38:1364:22:781:-52.5265,0,-104.999	1/1:30:2,28:2:72:28:1000:-83.4787,-2.19418,0	0/1:4:1,3:1:36:3:104:-8.49868,0,-2.39415	0/0:55:53,2:53:1885:2:72:0,-9.71993,-163.09	0/1:174:106,68:106:3768:68:2448:-168.195,0,-286.94	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/0:163:162,1:162:5812:1:36:0,-45.4696,-519.559	0/0:104:99,5:99:3526:5:180:0,-14.7551,-300.909	0/0:55:53,2:53:1870:2:72:0,-9.71993,-161.739	0/1:93:77,16:77:2753:16:576:-24.1788,0,-220.014	0/0:105:102,3:102:3611:3:108:0,-21.533,-314.838	0/1:161:95,66:95:3401:66:2356:-163.46,0,-257.837	0/1:43:32,11:32:1148:11:386:-22.1308,0,-90.6855	0/0:43:41,2:41:1461:2:72:0,-6.10757,-124.947	0/1:58:39,18:39:1377:18:644:-40.7722,0,-106.708	0/1:14:3,11:3:108:11:392:-31.4056,0,-5.86075	0/0:125:119,6:119:4214:6:208:0,-18.5697,-360.382	0/0:119:111,8:111:3949:8:288:0,-9.55516,-329.334	0/1:160:141,19:141:5030:19:684:-13.7255,0,-404.673	0/0:178:167,11:167:5946:11:381:0,-18.9627,-500.627	0/1:32:19,13:19:665:13:468:-32.8267,0,-50.5398	0/1:68:38,30:38:1364:30:1080:-77.0432,0,-102.577	0/1:41:5,36:5:180:36:1281:-103.213,0,-4.20983	0/1:124:108,16:108:3864:16:576:-14.8473,0,-310.438	0/1:77:64,13:64:2291:13:468:-19.2803,0,-183.243	0/0:144:136,8:136:4816:8:280:0,-17.8096,-408.044	0/0:52:52,0:52:1841:0:0:0,-15.6536,-165.968	0/1:117:65,52:65:2332:52:1868:-133.179,0,-174.919	0/1:54:43,11:43:1529:11:396:-19.7271,0,-121.645	0/1:208:146,62:146:5183:62:2218:-137.225,0,-403.995	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:69:65,4:65:2331:4:144:0,-7.45745,-196.735	0/0:66:63,3:63:2253:3:108:0,-9.79281,-192.956	0/1:59:34,25:34:1224:25:900:-63.5602,0,-92.7063	0/1:129:89,40:89:3184:40:1440:-90.5741,0,-247.937	0/1:147:89,58:89:3165:58:2075:-142.768,0,-240.823	0/0:171:165,6:165:5902:6:216:0,-31.6856,-510.933	0/0:96:90,6:90:3206:6:212:0,-9.47408,-269.335
chr02	951394	.	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chr02	1398460	.	A	G	158033	PASS	AB=0.514692;ABP=7.09402;AC=164;AF=0.87234;AN=188;AO=7194;CIGAR=1X;DP=8265;DPB=8265;DPRA=0;EPP=15624.6;EPPR=2313.46;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.969;MQMR=59.9483;NS=94;NUMALT=1;ODDS=7.28314;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=255555;QR=37938;RO=1064;RPL=0;RPP=15624.6;RPPR=2313.46;RPR=7194;RUN=1;SAF=0;SAP=15624.6;SAR=7194;SRF=0;SRP=2313.46;SRR=1064;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:24:0,23:0:0:23:819:-73.6435,-6.92369,0	1/1:97:0,97:0:0:97:3441:-309.901,-29.1999,0	1/1:70:0,70:0:0:70:2475:-223.001,-21.0721,0	0/1:198:90,108:90:3228:108:3866:-288.531,0,-231.136	1/1:50:0,50:0:0:50:1783:-160.752,-15.0515,0	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	1/1:98:0,98:0:0:98:3468:-312.33,-29.5009,0	1/1:146:0,145:0:0:145:5158:-463.993,-43.6494,0	1/1:114:0,113:0:0:113:4015:-361.328,-34.0164,0	1/1:97:0,97:0:0:97:3456:-311.226,-29.1999,0	1/1:37:0,37:0:0:37:1314:-118.561,-11.1381,0	1/1:92:0,92:0:0:92:3237:-291.553,-27.6948,0	1/1:67:0,67:0:0:67:2410:-217.156,-20.169,0	0/1:39:18,21:18:644:21:743:-55.4532,0,-46.4639	1/1:54:0,54:0:0:54:1888:-170.194,-16.2556,0	0/1:76:43,33:43:1516:33:1179:-83.5396,0,-113.852	1/1:34:0,34:0:0:34:1198:-108.117,-10.235,0	1/1:36:0,36:0:0:36:1272:-114.78,-10.8371,0	1/1:29:0,29:0:0:29:1022:-92.2909,-8.72987,0	0/1:154:74,80:74:2652:80:2841:-209.567,0,-192.568	0/1:173:74,98:74:2648:98:3459:-259.381,0,-186.43	1/1:81:0,81:0:0:81:2882:-259.616,-24.3834,0	1/1:80:0,80:0:0:80:2865:-258.086,-24.0824,0	1/1:28:1,27:1:36:27:949:-82.1222,-4.83057,0	1/1:65:0,65:0:0:65:2304:-207.62,-19.567,0	1/1:311:1,310:1:36:310:11038:-989.7,-90.0221,0	1/1:196:0,196:0:0:196:7015:-631.41,-59.0019,0	1/1:36:0,36:0:0:36:1280:-115.503,-10.8371,0	1/1:314:0,314:0:0:314:11179:-1006,-94.5234,0	1/1:204:0,204:0:0:204:7256:-653.092,-61.4101,0	0/1:90:45,45:45:1603:45:1608:-117.917,0,-117.467	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:26:0,26:0:0:26:906:-81.8509,-7.82678,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	1/1:181:0,181:0:0:181:6462:-581.666,-54.4864,0	0/1:105:39,66:39:1392:66:2351:-180.241,0,-93.4135	0/1:48:22,26:22:780:26:917:-68.3952,0,-56.0736	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:155:0,155:0:0:155:5498:-494.947,-46.6597,0	1/1:33:0,33:0:0:33:1175:-106.057,-9.93399,0	0/1:77:43,34:43:1540:34:1193:-84.4933,0,-115.714	0/1:57:24,33:24:842:33:1173:-88.7168,0,-58.937	0/1:71:32,39:32:1148:39:1396:-104.566,0,-82.2567	1/1:100:0,100:0:0:100:3583:-322.677,-30.103,0	0/1:134:69,65:69:2472:65:2310:-167.822,0,-182.396	1/1:196:0,196:0:0:196:6959:-626.369,-59.0019,0	1/1:96:1,95:1:36:95:3372:-300.097,-25.3006,0	1/1:120:0,120:0:0:120:4291:-386.367,-36.1236,0	1/1:63:0,63:0:0:63:2232:-201.142,-18.9649,0	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	1/1:116:0,116:0:0:116:4134:-372.234,-34.9195,0	1/1:84:0,84:0:0:84:2961:-266.721,-25.2865,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:171:0,171:0:0:171:6051:-544.65,-51.4761,0	0/1:19:12,7:12:415:7:243:-16.4879,0,-31.9607	0/1:11:5,6:5:176:6:216:-16.4792,0,-12.8737	1/1:20:0,20:0:0:20:692:-62.5986,-6.0206,0	1/1:75:0,75:0:0:75:2681:-241.498,-22.5773,0	0/1:78:43,35:43:1519:35:1225:-87.0711,0,-113.522	1/1:12:0,12:0:0:12:424:-38.4964,-3.61236,0	1/1:241:0,241:0:0:241:8540:-768.601,-72.5482,0	1/1:158:0,158:0:0:158:5594:-503.577,-47.5627,0	1/1:74:2,72:2:72:72:2565:-224.262,-15.4395,0	1/1:100:0,100:0:0:100:3534:-318.269,-30.103,0	0/1:150:62,88:62:2186:88:3088:-232.993,0,-151.848	1/1:165:2,163:2:72:163:5767:-512.223,-42.8332,0	1/1:29:0,29:0:0:29:1023:-92.3817,-8.72987,0	1/1:51:0,51:0:0:51:1804:-162.639,-15.3525,0	0/1:39:29,10:29:1028:10:360:-21.0041,0,-81.0929	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:130:0,129:0:0:129:4585:-412.457,-38.8329,0	1/1:106:0,106:0:0:106:3732:-336.08,-31.9092,0	1/1:112:0,111:0:0:111:3959:-356.124,-33.4143,0	1/1:177:0,176:0:0:176:6265:-563.584,-52.9813,0	1/1:52:0,52:0:0:52:1851:-166.869,-15.6536,0	1/1:88:0,88:0:0:88:3149:-283.633,-26.4906,0	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:149:0,149:0:0:149:5318:-478.755,-44.8535,0	0/1:110:44,66:44:1584:66:2325:-176.394,0,-109.738	0/1:252:113,139:113:4052:139:4889:-364.303,0,-289.007	1/1:58:0,58:0:0:58:2064:-186.03,-17.4597,0	1/1:74:0,74:0:0:74:2639:-237.754,-22.2762,0	0/1:41:18,23:18:627:23:812:-61.0587,0,-44.4122	0/1:129:77,52:77:2760:52:1853:-128.215,0,-209.809	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:89:1,88:1:36:88:3133:-278.597,-23.1934,0	1/1:51:0,51:0:0:51:1800:-162.279,-15.3525,0	1/1:36:0,36:0:0:36:1272:-114.781,-10.8371,0	0/1:52:27,25:27:957:25:892:-64.9461,0,-70.7903	0/1:59:46,13:46:1629:13:453:-23.3389,0,-129.136	1/1:58:0,58:0:0:58:2067:-186.3,-17.4597,0	1/1:121:0,121:0:0:121:4293:-386.547,-36.4246,0
chr02	1599021	.	G	A	516025	PASS	AB=0.520124;ABP=24.5973;AC=163;AF=0.867021;AN=188;AO=18758;CIGAR=1X;DP=21723;DPB=21723;DPRA=0;EPP=40735.5;EPPR=6437.08;GTI=0;LEN=1;MEANALT=1.02128;MQM=57.105;MQMR=59.8073;NS=94;NUMALT=1;ODDS=7.75454;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=666372;QR=105354;RO=2963;RPL=12063;RPP=3338.75;RPPR=608.561;RPR=6695;RUN=1;SAF=12063;SAP=3338.75;SAR=6695;SRF=1936;SRP=608.561;SRR=1027;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:76:0,76:0:0:76:2699:-242.489,-22.8783,0	1/1:375:0,375:0:0:375:13342:-1199.24,-112.886,0	1/1:350:0,350:0:0:350:12460:-1119.7,-105.361,0	0/1:488:229,259:229:8179:259:9159:-674.713,0,-589.197	1/1:231:1,230:1:36:230:8164:-729.732,-65.9397,0	1/1:116:0,116:0:0:116:4129:-371.323,-34.9195,0	1/1:343:0,343:0:0:343:12191:-1095.77,-103.253,0	1/1:473:0,473:0:0:473:16782:-1506.11,-142.387,0	1/1:228:0,228:0:0:228:8082:-726.286,-68.6348,0	1/1:200:1,199:1:36:199:7083:-632,-56.6077,0	1/1:114:0,114:0:0:114:4046:-363.42,-34.3174,0	1/1:156:0,156:0:0:156:5566:-500.695,-46.9607,0	1/1:150:0,150:0:0:150:5356:-481.49,-45.1545,0	0/1:184:94,90:94:3316:90:3199:-232.137,0,-243.251	1/1:161:1,160:1:36:160:5716:-510.328,-44.8676,0	0/1:102:38,64:38:1347:64:2259:-172.601,0,-90.7925	1/1:148:0,148:0:0:148:5281:-475.023,-44.5524,0	1/1:145:0,145:0:0:145:5130:-461.227,-43.6494,0	1/1:97:0,97:0:0:97:3453:-309.955,-29.1999,0	0/1:537:272,265:272:9715:265:9467:-689.943,0,-712.64	0/1:298:136,162:136:4842:162:5685:-421.122,0,-346.192	1/1:174:0,174:0:0:174:6179:-555.506,-52.3792,0	1/1:167:0,167:0:0:167:5946:-534.203,-50.272,0	0/1:273:136,137:136:4854:137:4871:-355.281,0,-354.83	1/1:195:0,195:0:0:195:6907:-621.255,-58.7009,0	1/1:734:0,734:0:0:734:26115:-2347.17,-220.956,0	1/1:565:1,564:1:36:564:20091:-1802.13,-166.484,0	1/1:96:0,96:0:0:96:3423:-307.859,-28.8989,0	1/1:631:0,631:0:0:631:22442:-2018.4,-189.95,0	1/1:241:0,241:0:0:241:8538:-766.911,-72.5482,0	0/1:234:102,132:102:3647:132:4670:-349.611,0,-257.993	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:74:0,74:0:0:74:2588:-232.846,-22.2762,0	1/1:13:0,13:0:0:13:464:-41.9773,-3.91339,0	1/1:25:0,25:0:0:25:882:-79.6293,-7.52575,0	0/1:37:24,13:24:856:13:468:-31.2975,0,-66.223	1/1:400:0,400:0:0:400:14246:-1279.68,-120.412,0	0/1:347:164,183:164:5820:183:6542:-483.284,0,-419.446	0/1:187:92,95:92:3256:95:3367:-246.114,0,-236.872	1/1:10:0,10:0:0:10:341:-30.9927,-3.0103,0	1/1:340:0,340:0:0:340:12094:-1086.67,-102.35,0	1/1:90:0,90:0:0:90:3227:-289.852,-27.0927,0	1/1:302:0,302:0:0:302:10741:-964.618,-90.9111,0	1/1:166:0,166:0:0:166:5935:-533.227,-49.971,0	0/1:149:63,86:63:2240:86:3007:-225.117,0,-157.002	1/1:224:1,223:1:36:223:7916:-708.112,-63.8324,0	0/1:360:161,199:161:5707:199:7065:-526.41,0,-405.378	1/1:478:0,478:0:0:478:16859:-1515.69,-143.892,0	1/1:204:0,204:0:0:204:7270:-652.132,-61.4101,0	1/1:432:1,431:1:36:431:15369:-1376.5,-126.447,0	1/1:320:0,320:0:0:320:11348:-1020.14,-96.3296,0	1/1:15:0,15:0:0:15:540:-48.8754,-4.51545,0	1/1:367:0,367:0:0:367:13167:-1183.87,-110.478,0	1/1:98:0,98:0:0:98:3463:-311.463,-29.5009,0	1/1:23:0,23:0:0:23:828:-74.721,-6.92369,0	1/1:377:0,377:0:0:377:13374:-1201.6,-113.488,0	0/1:141:68,73:68:2415:73:2584:-190.122,0,-175.146	0/1:15:5,10:5:176:10:360:-28.2255,0,-11.6696	1/1:37:0,37:0:0:37:1328:-119.655,-11.1381,0	1/1:188:0,188:0:0:188:6649:-597.589,-56.5936,0	0/1:198:96,102:96:3407:102:3604:-264.386,0,-247.064	1/1:20:0,20:0:0:20:704:-63.6361,-6.0206,0	1/1:496:0,496:0:0:496:17681:-1590.01,-149.311,0	1/1:348:4,344:4:135:344:12211:-1084.47,-92.2759,0	1/1:145:3,142:3:108:142:5003:-439.848,-33.5742,0	1/1:215:0,215:0:0:215:7600:-683.03,-64.7215,0	0/1:484:259,224:259:9234:224:7977:-571.314,0,-685.394	1/1:218:1,217:1:36:217:7739:-692.41,-62.0263,0	1/1:91:0,91:0:0:91:3239:-291.158,-27.3937,0	1/1:261:0,261:0:0:261:9277:-833.814,-78.5688,0	0/1:194:80,114:80:2816:114:4047:-305.623,0,-195.245	1/1:47:0,47:0:0:47:1680:-150.622,-14.1484,0	1/1:212:2,210:2:72:210:7401:-658.26,-56.9816,0	0/1:162:86,76:86:3051:76:2700:-194.313,0,-226.034	1/1:358:0,358:0:0:358:12642:-1134.98,-107.769,0	1/1:495:3,492:3:108:492:17455:-1559.1,-138.935,0	1/1:261:0,261:0:0:261:9251:-831.239,-78.5688,0	1/1:293:0,293:0:0:293:10419:-935.301,-88.2018,0	1/1:18:0,18:0:0:18:636:-57.5512,-5.41854,0	1/1:349:1,348:1:36:348:12365:-1107.86,-101.461,0	0/1:295:124,171:124:4386:171:6077:-457.046,0,-306.056	0/1:486:216,269:216:7705:269:9534:-710.688,0,-546.36	1/1:246:0,246:0:0:246:8722:-782.944,-74.0534,0	1/1:148:0,148:0:0:148:5242:-470.17,-44.5524,0	0/1:202:104,98:104:3680:98:3487:-252.958,0,-270.57	0/1:291:133,158:133:4719:158:5611:-416.457,0,-337.237	0/1:101:43,58:43:1531:58:2067:-155.561,0,-107.678	1/1:160:0,160:0:0:160:5694:-511.846,-48.1648,0	1/1:145:0,145:0:0:145:5117:-459.885,-43.6494,0	1/1:95:0,95:0:0:95:3377:-303.599,-28.5979,0	0/1:164:79,85:79:2787:85:3011:-221.401,0,-201.689	0/1:208:139,69:139:4957:69:2443:-157.256,0,-383.665	1/1:364:0,364:0:0:364:12895:-1158.77,-109.575,0	1/1:245:0,245:0:0:245:8759:-786.004,-73.7524,0
chr02	1599027	.	A	T	515163	PASS	AB=0.515442;ABP=15.7525;AC=163;AF=0.867021;AN=188;AO=18655;CIGAR=1X;DP=21658;DPB=21658;DPRA=0;EPP=40511.8;EPPR=6506.57;GTI=0;LEN=1;MEANALT=1.06383;MQM=57.0957;MQMR=59.7896;NS=94;NUMALT=1;ODDS=5.74797;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=664403;QR=106793;RO=2995;RPL=11889;RPP=3057.99;RPPR=647.745;RPR=6766;RUN=1;SAF=11889;SAP=3057.99;SAR=6766;SRF=1969;SRP=647.745;SRR=1026;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:75:0,75:0:0:75:2630:-236.282,-22.5773,0	1/1:374:0,374:0:0:374:13311:-1196.59,-112.585,0	1/1:345:0,345:0:0:345:12320:-1106.92,-103.855,0	0/1:487:233,254:233:8311:254:8978:-658.718,0,-601.374	1/1:230:1,229:1:36:229:8127:-727.071,-65.6386,0	1/1:115:0,115:0:0:115:4105:-369.166,-34.6185,0	1/1:349:0,349:0:0:349:12430:-1117.04,-105.059,0	1/1:466:0,466:0:0:466:16635:-1493.41,-140.28,0	1/1:227:0,227:0:0:227:8071:-725.664,-68.3338,0	1/1:196:0,196:0:0:196:7036:-631.298,-59.0019,0	1/1:110:0,110:0:0:110:3931:-353.046,-33.1133,0	1/1:156:0,156:0:0:156:5574:-501.077,-46.9607,0	1/1:150:0,150:0:0:150:5321:-478.359,-45.1545,0	0/1:187:97,90:97:3455:90:3207:-231.955,0,-254.612	1/1:163:1,161:1:32:161:5718:-510.87,-45.9074,0	0/1:104:39,65:39:1400:65:2316:-177.109,0,-94.9601	1/1:148:0,148:0:0:148:5254:-472.499,-44.5524,0	1/1:144:0,144:0:0:144:5135:-461.605,-43.3483,0	1/1:95:0,95:0:0:95:3389:-304.354,-28.5979,0	0/1:533:274,259:274:9780:259:9253:-671.919,0,-719.697	0/1:302:139,162:139:4967:162:5772:-427.375,0,-356.061	1/1:173:1,172:1:36:172:6128:-547.325,-48.4799,0	1/1:162:0,162:0:0:162:5770:-518.396,-48.7669,0	0/1:273:138,135:138:4923:135:4830:-351.869,0,-361.041	1/1:191:0,191:0:0:191:6736:-605.894,-57.4967,0	1/1:739:0,739:0:0:739:26390:-2371.49,-222.461,0	1/1:560:0,560:0:0:560:19953:-1793.34,-168.577,0	1/1:97:0,97:0:0:97:3442:-309.567,-29.1999,0	1/1:631:0,631:0:0:631:22533:-2026.52,-189.95,0	1/1:238:0,238:0:0:238:8461:-760.052,-71.6451,0	0/1:236:103,133:103:3671:133:4741:-355.385,0,-259.551	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:75:0,75:0:0:75:2692:-242.072,-22.5773,0	1/1:14:0,14:0:0:14:500:-45.2004,-4.21442,0	1/1:25:0,25:0:0:25:886:-79.9913,-7.52575,0	0/1:38:25,13:25:900:13:468:-30.9965,0,-69.8819	1/1:392:0,392:0:0:392:13952:-1253.72,-118.004,0	0/1:348:164,184:164:5832:184:6585:-486.494,0,-420.226	0/1:190:94,96:94:3340:96:3398:-247.964,0,-243.501	1/1:10:0,10:0:0:10:356:-32.3534,-3.0103,0	1/1:345:0,345:0:0:345:12254:-1101.38,-103.855,0	1/1:88:0,88:0:0:88:3134:-281.516,-26.4906,0	1/1:302:0,299:0:0:299:10609:-952.424,-90.008,0	1/1:168:0,168:0:0:168:6005:-539.356,-50.573,0	0/1:146:63,83:63:2252:83:2964:-221.163,0,-158.987	1/1:231:1,230:1:36:230:8229:-736.244,-65.9397,0	0/1:362:163,199:163:5788:199:7127:-531.517,0,-411.575	1/1:475:0,475:0:0:475:16893:-1518.65,-142.989,0	1/1:200:0,200:0:0:200:7169:-643.049,-60.206,0	1/1:429:0,429:0:0:429:15265:-1371.3,-129.142,0	1/1:322:0,322:0:0:322:11452:-1029.42,-96.9317,0	1/1:15:0,15:0:0:15:540:-48.8754,-4.51545,0	1/1:363:0,363:0:0:363:12988:-1167.79,-109.274,0	1/1:94:0,94:0:0:94:3340:-300.664,-28.2968,0	1/1:23:0,23:0:0:23:824:-74.3636,-6.92369,0	1/1:372:0,372:0:0:372:13219:-1187.47,-111.983,0	0/1:140:69,70:69:2440:70:2474:-180.485,0,-177.669	0/1:16:6,10:6:216:10:345:-26.5642,0,-14.974	1/1:37:0,37:0:0:37:1324:-119.297,-11.1381,0	1/1:189:0,189:0:0:189:6725:-604.393,-56.8947,0	0/1:201:98,103:98:3495:103:3675:-269.871,0,-254.156	1/1:22:0,22:0:0:22:769:-69.4589,-6.62266,0	1/1:481:0,481:0:0:481:17173:-1543.85,-144.795,0	1/1:349:3,346:3:108:346:12346:-1098.76,-94.9843,0	1/1:143:4,139:4:135:139:4942:-431.926,-30.5648,0	1/1:217:0,217:0:0:217:7696:-691.651,-65.3235,0	0/1:481:259,221:259:9241:221:7842:-559.792,0,-686.764	1/1:214:2,212:2:68:212:7558:-673.281,-57.9627,0	1/1:90:0,90:0:0:90:3180:-285.852,-27.0927,0	1/1:260:0,260:0:0:260:9285:-834.693,-78.2678,0	0/1:195:81,114:81:2877:114:4001:-301.158,0,-200.445	1/1:45:0,45:0:0:45:1606:-144.502,-13.5464,0	1/1:212:2,210:2:72:210:7494:-666.634,-56.9816,0	0/1:164:87,77:87:3103:77:2759:-199.01,0,-230.111	1/1:355:0,355:0:0:355:12671:-1136.6,-106.866,0	1/1:492:0,492:0:0:492:17499:-1573.09,-148.107,0	1/1:258:0,258:0:0:258:9177:-823.867,-77.6657,0	1/1:288:0,288:0:0:288:10271:-921.962,-86.6966,0	1/1:19:0,19:0:0:19:684:-61.8735,-5.71957,0	1/1:350:1,349:1:36:349:12458:-1116.22,-101.762,0	0/1:296:124,172:124:4429:172:6040:-454.008,0,-309.623	0/1:483:215,268:215:7662:268:9582:-715.909,0,-543.933	1/1:243:0,243:0:0:243:8639:-775.379,-73.1503,0	1/1:148:0,148:0:0:148:5272:-472.931,-44.5524,0	0/1:202:106,96:106:3779:96:3382:-243.529,0,-279.477	0/1:296:136,160:136:4872:160:5659:-419.217,0,-349.504	0/1:100:42,58:42:1512:58:2072:-156.315,0,-106.272	1/1:161:0,161:0:0:161:5744:-516.327,-48.4658,0	1/1:143:0,143:0:0:143:5095:-457.905,-43.0473,0	1/1:98:0,97:0:0:97:3459:-310.599,-29.1999,0	0/1:165:81,84:81:2892:84:3003:-220.285,0,-210.826	0/1:207:142,65:142:5061:65:2252:-140.404,0,-393.322	1/1:367:0,367:0:0:367:13083:-1175.36,-110.478,0	1/1:241:1,240:1:36:240:8573:-765.666,-68.95,0
chr02	1750015	.	T	C	13416.6	PASS	AB=0.371678;ABP=363.581;AC=24;AF=0.12766;AN=188;AO=954;CIGAR=1X;DP=11075;DPB=11075;DPRA=1.04101;EPP=2074.59;EPPR=21978.3;GTI=1;LEN=1;MEANALT=1;MQM=59.9224;MQMR=59.9799;NS=94;NUMALT=1;ODDS=2.22495;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34180;QR=362344;RO=10120;RPL=0;RPP=2074.59;RPPR=21978.3;RPR=954;RUN=1;SAF=954;SAP=2074.59;SAR=0;SRF=10120;SRP=21978.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:176:176,0:176:6328:0:0:0,-52.9813,-569.607	0/0:166:166,0:166:5944:0:0:0,-49.971,-535.068	0/1:265:177,88:177:6324:88:3160:-204.851,0,-489.481	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.646	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/0:171:170,0:170:6049:0:0:0,-51.1751,-544.156	0/0:186:186,0:186:6676:0:0:0,-55.9916,-600.905	0/0:100:100,0:100:3572:0:0:0,-30.103,-321.688	0/0:115:115,0:115:4092:0:0:0,-34.6184,-368.468	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/0:51:51,0:51:1836:0:0:0,-15.3525,-165.521	0/1:46:29,17:29:1044:17:608:-41.2046,0,-80.4274	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/1:31:17,14:17:608:14:496:-35.6423,0,-45.7201	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:288:171,117:171:6112:117:4192:-290.72,0,-463.485	0/1:130:74,56:74:2652:56:2000:-141.138,0,-199.663	0/0:197:197,0:197:7076:0:0:0,-59.3029,-636.897	0/0:67:67,0:67:2396:0:0:0,-20.169,-215.811	0/1:85:53,32:53:1896:32:1136:-76.9613,0,-145.331	0/0:128:128,0:128:4580:0:0:0,-38.5318,-412.365	0/0:506:506,0:506:18108:0:0:0,-152.321,-1629.27	0/0:284:284,0:284:10157:0:0:0,-85.4925,-914.06	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6906	0/0:419:419,0:419:14980:0:0:0,-126.132,-1347.93	0/0:279:279,0:279:10000:0:0:0,-83.9874,-899.935	0/1:118:67,51:67:2392:51:1832:-129.635,0,-180.016	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/0:123:123,0:123:4396:0:0:0,-37.0267,-395.814	0/1:260:179,81:179:6393:81:2900:-182.96,0,-497.191	0/1:41:13,28:13:464:28:1004:-78.3265,0,-29.7553	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:229:229,0:229:8188:0:0:0,-68.9359,-736.93	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/0:160:160,0:160:5748:0:0:0,-48.1648,-517.433	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/1:37:26,11:26:924:11:396:-24.8446,0,-72.3395	0/0:142:142,0:142:5092:0:0:0,-42.7463,-458.423	0/1:132:104,28:104:3740:28:1000:-50.5794,0,-297.063	0/0:239:238,1:238:8504:1:36:0,-68.3479,-760.574	0/0:164:164,0:164:5860:0:0:0,-49.3689,-527.513	0/0:196:196,0:196:7020:0:0:0,-59.0019,-631.862	0/0:197:197,0:197:7056:0:0:0,-59.3029,-635.098	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/0:191:191,0:191:6860:0:0:0,-57.4967,-617.449	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.767	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/0:208:208,0:208:7436:0:0:0,-62.6142,-669.287	0/1:30:22,8:22:792:8:284:-16.8725,0,-62.5748	0/0:15:14,1:14:500:1:36:0,-0.917175,-41.5459	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.3154	0/0:146:146,0:146:5216:0:0:0,-43.9504,-469.58	0/1:96:55,41:55:1980:41:1476:-104.237,0,-149.576	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:310:309,1:309:11072:1:36:0,-89.721,-992.772	0/0:308:307,1:307:11004:1:36:0,-89.119,-986.655	0/0:121:110,11:110:3952:11:392:0,-0.818413,-320.262	0/0:104:104,0:104:3712:0:0:0,-31.3071,-334.283	0/1:136:94,42:94:3360:42:1512:-95.4345,0,-261.677	0/0:207:207,0:207:7396:0:0:0,-62.3132,-665.686	0/0:12:12,0:12:417:0:0:0,-3.61236,-37.8602	0/0:101:101,0:101:3620:0:0:0,-30.404,-326.005	0/1:74:41,33:41:1468:33:1180:-84.2309,0,-110.14	0/0:67:67,0:67:2388:0:0:0,-20.169,-215.178	0/0:178:178,0:178:6376:0:0:0,-53.5833,-573.929	0/1:66:29,37:29:1044:37:1328:-99.9543,0,-74.4068	0/0:223:223,0:223:8000:0:0:0,-67.1297,-720.019	0/0:226:226,0:226:8084:0:0:0,-68.0328,-727.579	0/0:227:227,0:227:8128:0:0:0,-68.3338,-731.536	0/0:118:116,2:116:4156:2:72:0,-28.6848,-367.386	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:173:173,0:173:6184:0:0:0,-52.0782,-556.659	0/1:173:112,61:112:4016:61:2192:-145.467,0,-309.55	0/1:288:183,105:183:6528:105:3756:-251.536,0,-500.91	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.122	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.274	0/1:35:26,9:26:932:9:324:-18.9698,0,-73.6605	0/1:66:35,31:35:1260:31:1108:-80.163,0,-93.8375	0/1:21:13,8:13:468:8:288:-19.9458,0,-36.138	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.709	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/1:63:41,22:41:1476:22:792:-52.6408,0,-114.171	0/1:29:15,14:15:536:14:500:-36.6063,0,-39.8449	0/0:105:105,0:105:3756:0:0:0,-31.6081,-338.24	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876
chr02	1845696	.	C	T	169123	PASS	AB=0.497544;ABP=3.15964;AC=162;AF=0.861702;AN=188;AO=7702;CIGAR=1X;DP=9143;DPB=9143;DPRA=0;EPP=16727.7;EPPR=3129.93;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9907;MQMR=60;NS=94;NUMALT=1;ODDS=0.714668;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=275372;QR=51361;RO=1440;RPL=7702;RPP=16727.7;RPPR=3121.25;RPR=0;RUN=1;SAF=7702;SAP=16727.7;SAR=0;SRF=1439;SRP=3121.25;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:100:0,100:0:0:100:3564:-320.969,-30.103,0	1/1:88:0,88:0:0:88:3164:-284.984,-26.4906,0	0/1:178:91,87:91:3234:87:3099:-225.555,0,-237.696	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	1/1:110:0,110:0:0:110:3886:-349.935,-33.1133,0	1/1:159:1,158:1:36:158:5664:-506.28,-44.2655,0	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	1/1:114:0,114:0:0:114:4084:-367.745,-34.3174,0	1/1:124:0,124:0:0:124:4426:-398.512,-37.3277,0	1/1:76:0,76:0:0:76:2720:-245.043,-22.8783,0	1/1:86:0,86:0:0:86:3084:-277.788,-25.8886,0	0/1:199:102,97:102:3638:97:3475:-253.056,0,-267.72	1/1:70:0,70:0:0:70:2516:-226.692,-21.0721,0	0/1:78:28,50:28:993:50:1800:-138.802,0,-66.2022	1/1:133:0,133:0:0:133:4768:-429.277,-40.037,0	1/1:100:0,100:0:0:100:3576:-322.048,-30.103,0	1/1:81:0,81:0:0:81:2896:-260.876,-24.3834,0	0/1:131:78,53:78:2781:53:1895:-131.392,0,-211.095	0/1:81:47,34:47:1670:34:1215:-85.2723,0,-126.202	1/1:61:1,60:1:36:60:2142:-189.078,-14.7646,0	1/1:32:0,32:0:0:32:1127:-101.737,-9.63296,0	0/1:75:35,40:35:1238:40:1424:-105.88,0,-89.1456	1/1:73:0,72:0:0:72:2584:-232.449,-21.6742,0	1/1:250:0,250:0:0:250:8918:-802.603,-75.2575,0	1/1:147:1,146:1:36:146:5218:-466.137,-40.6531,0	1/1:41:0,41:0:0:41:1463:-131.965,-12.3422,0	1/1:198:0,198:0:0:198:7055:-635.012,-59.6039,0	1/1:207:0,207:0:0:207:7395:-665.598,-62.3132,0	0/1:73:31,42:31:1116:42:1499:-113.229,0,-78.7765	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	1/1:201:0,201:0:0:201:7198:-647.873,-60.507,0	0/1:214:88,126:88:3151:126:4514:-342.006,0,-219.394	0/1:131:65,66:65:2332:66:2368:-173.943,0,-170.705	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:107:0,107:0:0:107:3801:-342.289,-32.2102,0	1/1:61:0,61:0:0:61:2192:-197.545,-18.3628,0	1/1:123:0,123:0:0:123:4391:-395.364,-37.0267,0	1/1:87:0,87:0:0:87:3120:-281.026,-26.1896,0	0/1:68:27,41:27:968:41:1467:-111.855,0,-66.9673	1/1:63:0,63:0:0:63:2256:-203.303,-18.9649,0	0/1:94:49,45:49:1760:45:1604:-116.353,0,-130.387	1/1:167:0,167:0:0:167:5962:-536.688,-50.272,0	1/1:103:0,103:0:0:103:3663:-329.873,-31.0061,0	1/1:175:0,175:0:0:175:6271:-564.482,-52.6803,0	1/1:147:0,147:0:0:147:5276:-474.974,-44.2514,0	1/1:17:1,16:1:36:16:572:-48.2152,-1.51924,0	1/1:147:0,147:0:0:147:5260:-473.537,-44.2514,0	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	0/1:129:69,60:69:2464:60:2144:-154.395,0,-183.182	0/1:24:9,15:9:305:15:527:-40.5355,0,-20.5525	0/1:13:6,7:6:212:7:248:-18.7508,0,-15.5114	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	1/1:76:0,76:0:0:76:2723:-245.312,-22.8783,0	0/1:191:97,94:97:3441:94:3356:-244.76,0,-252.404	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:166:0,166:0:0:166:5931:-533.899,-49.971,0	1/1:205:1,204:1:36:204:7293:-652.822,-58.1129,0	1/1:138:2,136:2:72:136:4855:-430.266,-34.7054,0	1/1:58:0,58:0:0:58:2069:-186.479,-17.4597,0	0/1:130:64,66:64:2292:66:2320:-169.923,0,-167.407	1/1:96:1,95:1:36:95:3386:-301.357,-25.3006,0	1/1:87:0,87:0:0:87:3102:-279.407,-26.1896,0	1/1:101:0,101:0:0:101:3628:-326.724,-30.404,0	0/1:134:79,55:79:2816:55:1971:-137.326,0,-213.342	1/1:19:0,19:0:0:19:671:-60.7158,-5.71957,0	1/1:97:0,97:0:0:97:3480:-313.411,-29.1999,0	0/1:58:31,27:31:1112:27:968:-69.9776,0,-82.9316	1/1:188:0,188:0:0:188:6713:-604.246,-56.5936,0	1/1:144:0,144:0:0:144:5127:-461.573,-43.3483,0	1/1:134:0,134:0:0:134:4792:-431.279,-40.338,0	1/1:109:0,109:0:0:109:3900:-351.194,-32.8123,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:105:0,105:0:0:105:3759:-338.509,-31.6082,0	0/1:112:56,56:56:2012:56:2012:-147.638,0,-147.638	0/1:121:60,61:60:2129:61:2192:-161.121,0,-155.452	1/1:92:0,92:0:0:92:3304:-297.578,-27.6948,0	1/1:115:0,115:0:0:115:4127:-371.612,-34.6185,0	0/1:107:58,49:58:2076:49:1747:-125.303,0,-154.9	0/1:150:70,80:70:2487:80:2872:-213.562,0,-178.929	0/1:38:16,22:16:572:22:792:-60.1665,0,-40.3743	1/1:90:0,90:0:0:90:3236:-291.461,-27.0927,0	1/1:107:0,107:0:0:107:3832:-345.077,-32.2102,0	1/1:142:0,142:0:0:142:5072:-456.623,-42.7463,0	0/1:234:119,115:119:4239:115:4120:-300.543,0,-311.247	0/1:82:53,29:53:1891:29:1035:-68.7786,0,-145.783	1/1:21:0,21:0:0:21:737:-66.6503,-6.32163,0	1/1:105:0,105:0:0:105:3755:-338.15,-31.6082,0
chr02	1911231	.	A	G	481384	PASS	AB=0.479439;ABP=26.3163;AC=162;AF=0.861702;AN=188;AO=17475;CIGAR=1X;DP=20804;DPB=20804;DPRA=0;EPP=37949.5;EPPR=7216.64;GTI=2;LEN=1;MEANALT=1.07447;MQM=59.9937;MQMR=59.9994;NS=94;NUMALT=1;ODDS=2.82231;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=616260;QR=118461;RO=3322;RPL=9332;RPP=178.682;RPPR=5.68771;RPR=8143;RUN=1;SAF=9332;SAP=178.682;SAR=8143;SRF=1693;SRP=5.68771;SRR=1629;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:86:0,86:0:0:86:2967:-267.264,-25.8886,0	1/1:295:1,294:1:36:294:10422:-934.311,-85.2056,0	1/1:258:0,258:0:0:258:9039:-813.5,-77.6657,0	0/1:497:248,249:248:8857:249:8804:-642.746,0,-647.504	1/1:99:0,99:0:0:99:3468:-312.333,-29.802,0	1/1:139:0,139:0:0:139:4934:-444.214,-41.8432,0	1/1:439:1,438:1:36:438:15473:-1388.7,-128.554,0	1/1:343:1,341:1:36:341:12048:-1080.59,-99.7138,0	1/1:234:1,233:1:36:233:8214:-735.685,-66.8427,0	1/1:278:1,277:1:36:277:9813:-879.524,-80.0881,0	1/1:182:0,182:0:0:182:6387:-574.927,-54.7875,0	1/1:190:0,190:0:0:190:6634:-597.151,-57.1957,0	1/1:223:0,223:0:0:223:7857:-707.166,-67.1297,0	0/1:204:117,87:117:4171:87:3101:-217.908,0,-314.161	1/1:134:0,134:0:0:134:4718:-424.783,-40.338,0	0/1:114:58,56:58:2064:56:1958:-142.175,0,-151.714	1/1:193:0,192:0:0:192:6784:-610.41,-57.7978,0	1/1:125:0,125:0:0:125:4420:-397.973,-37.6288,0	1/1:131:0,131:0:0:131:4655:-419.113,-39.4349,0	0/1:369:195,173:195:6951:173:6086:-436.71,0,-514.517	0/1:354:190,164:190:6815:164:5823:-417.621,0,-506.854	1/1:126:0,126:0:0:126:4451:-400.764,-37.9298,0	1/1:163:0,163:0:0:163:5776:-519.953,-49.0679,0	0/1:261:156,105:156:5549:105:3666:-251.577,0,-420.965	1/1:180:1,179:1:36:179:6353:-568.265,-50.5871,0	1/1:645:0,645:0:0:645:22828:-2053.94,-194.164,0	1/1:489:0,488:0:0:488:17187:-1546.13,-146.903,0	1/1:86:0,86:0:0:86:3011:-271.223,-25.8886,0	1/1:686:0,686:0:0:686:24225:-2179.62,-206.507,0	1/1:229:0,229:0:0:229:8145:-733.071,-68.9359,0	0/1:290:151,139:151:5373:139:4932:-356.734,0,-396.405	1/1:32:0,32:0:0:32:1120:-101.105,-9.63296,0	1/1:38:0,38:0:0:38:1353:-122.068,-11.4391,0	1/1:8:0,8:0:0:8:275:-25.0835,-2.40824,0	1/1:22:0,22:0:0:22:754:-68.1733,-6.62266,0	0/1:25:12,13:12:424:13:436:-32.034,0,-30.9707	1/1:487:1,486:1:36:486:17139:-1538.57,-143.003,0	0/1:267:142,125:142:5079:125:4442:-319.578,0,-376.879	0/1:244:103,141:103:3668:141:4987:-375.528,0,-256.871	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:257:0,257:0:0:257:9044:-813.953,-77.3647,0	1/1:122:0,122:0:0:122:4320:-388.976,-36.7257,0	1/1:211:0,211:0:0:211:7438:-669.475,-63.5173,0	1/1:212:0,212:0:0:212:7460:-671.454,-63.8184,0	0/1:150:82,68:82:2944:68:2284:-160.667,0,-220.039	1/1:245:0,245:0:0:245:8664:-779.76,-73.7524,0	0/1:221:95,126:95:3388:126:4403:-329.92,0,-238.606	1/1:298:0,298:0:0:298:10442:-939.716,-89.7069,0	1/1:248:0,248:0:0:248:8720:-784.804,-74.6554,0	1/1:232:1,231:1:36:231:8172:-731.899,-66.2407,0	1/1:379:0,379:0:0:379:13365:-1202.66,-114.09,0	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:209:0,209:0:0:209:7366:-662.996,-62.9153,0	1/1:87:0,87:0:0:87:3084:-277.787,-26.1896,0	1/1:43:0,43:0:0:43:1499:-135.2,-12.9443,0	0/1:316:158,157:158:5611:157:5499:-400.019,0,-410.088	0/1:87:40,47:40:1427:47:1641:-121.786,0,-102.537	0/1:26:10,16:10:351:16:568:-43.6251,0,-24.0999	1/1:39:0,39:0:0:39:1379:-124.408,-11.7402,0	1/1:196:0,195:0:0:195:6899:-620.663,-58.7009,0	0/1:288:181,107:181:6460:107:3745:-250.556,0,-494.789	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:434:1,433:1:36:433:15162:-1360.73,-127.049,0	1/1:408:1,407:1:36:407:14335:-1286.32,-119.222,0	1/1:116:2,114:2:72:114:4057:-358.482,-28.0828,0	1/1:187:0,187:0:0:187:6488:-583.99,-56.2926,0	0/1:307:180,127:180:6379:127:4446:-307.9,0,-481.786	1/1:158:1,156:1:36:156:5518:-493.223,-43.9533,0	1/1:96:0,96:0:0:96:3410:-307.116,-28.8989,0	1/1:224:0,224:0:0:224:7932:-713.908,-67.4307,0	0/1:183:83,100:83:2962:100:3497:-259.855,0,-211.724	1/1:50:0,50:0:0:50:1737:-156.605,-15.0515,0	1/1:254:1,253:1:36:253:8913:-798.566,-72.8633,0	0/1:240:135,105:135:4831:105:3644:-255.917,0,-362.697	1/1:453:0,453:0:0:453:15956:-1435.75,-136.367,0	1/1:398:1,397:1:36:397:14042:-1259.96,-116.212,0	1/1:174:1,173:1:36:173:6128:-548.023,-48.7809,0	1/1:276:0,276:0:0:276:9799:-881.859,-83.0843,0	1/1:38:1,37:1:36:37:1289:-112.708,-7.84087,0	1/1:259:0,259:0:0:259:9109:-819.792,-77.9668,0	0/1:245:115,130:115:4120:130:4611:-341.403,0,-297.232	0/1:540:280,260:280:10005:260:9201:-665.508,0,-737.832	1/1:310:0,310:0:0:310:10992:-989.185,-93.3193,0	1/1:156:1,155:1:36:155:5490:-490.632,-43.3624,0	0/1:184:98,86:98:3482:86:3007:-215.474,0,-258.203	0/1:327:163,164:163:5827:164:5734:-417.748,0,-426.106	0/1:120:55,65:55:1949:65:2287:-169.966,0,-139.56	1/1:193:0,193:0:0:193:6807:-612.712,-58.0988,0	1/1:175:1,174:1:36:174:6141:-549.195,-49.082,0	1/1:151:0,151:0:0:151:5341:-480.827,-45.4555,0	0/1:338:163,175:163:5834:175:6184:-454.917,0,-423.422	0/1:150:92,58:92:3220:58:2028:-137.633,0,-244.869	1/1:299:0,299:0:0:299:10586:-952.667,-90.008,0	1/1:287:1,286:1:36:286:10172:-911.817,-82.7973,0
chr02	1940176	.	C	A	590843	PASS	AB=0.490561;ABP=8.66742;AC=162;AF=0.861702;AN=188;AO=21104;CIGAR=1X;DP=24861;DPB=24861;DPRA=0;EPP=45821.1;EPPR=8152.55;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.8342;MQMR=59.9989;NS=94;NUMALT=1;ODDS=2.11353;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=753272;QR=133528;RO=3753;RPL=10334;RPP=22.57;RPPR=60.4215;RPR=10770;RUN=1;SAF=10335;SAP=22.391;SAR=10769;SRF=1719;SRP=60.4215;SRR=2034;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:154:0,154:0:0:154:5490:-494.184,-46.3586,0	1/1:316:0,316:0:0:316:11265:-1013.53,-95.1255,0	1/1:457:1,456:1:36:456:16318:-1464.44,-133.972,0	0/1:586:305,281:305:10847:281:10037:-726.08,0,-799.733	1/1:168:2,166:2:72:166:5911:-524.968,-43.7363,0	1/1:137:0,137:0:0:137:4877:-439.058,-41.2411,0	1/1:267:1,266:1:36:266:9511:-852.325,-76.7767,0	1/1:553:0,553:0:0:553:19742:-1775.84,-166.47,0	1/1:282:0,282:0:0:282:10019:-901.005,-84.8905,0	1/1:297:0,297:0:0:297:10590:-952.993,-89.4059,0	1/1:132:0,132:0:0:132:4704:-423.513,-39.736,0	1/1:207:0,207:0:0:207:7382:-664.209,-62.3132,0	1/1:210:0,210:0:0:210:7507:-675.626,-63.2163,0	0/1:176:91,85:91:3229:85:3018:-218.668,0,-237.851	1/1:215:0,215:0:0:215:7681:-691.31,-64.7215,0	0/1:153:77,76:77:2738:76:2707:-197.81,0,-200.605	1/1:139:0,139:0:0:139:4940:-444.741,-41.8432,0	1/1:130:0,130:0:0:130:4619:-415.776,-39.1339,0	1/1:107:0,107:0:0:107:3840:-345.786,-32.2102,0	0/1:469:242,227:242:8642:227:8130:-590.419,0,-636.59	0/1:417:234,183:234:8339:183:6539:-463.021,0,-624.99	1/1:254:0,254:0:0:254:9067:-815.996,-76.4616,0	1/1:302:4,298:4:144:298:10585:-939.231,-77.5974,0	0/1:345:169,176:169:6016:176:6271:-460.586,0,-437.691	1/1:187:0,187:0:0:187:6688:-601.988,-56.2926,0	1/1:794:1,793:1:36:793:28315:-2543.88,-235.42,0	1/1:678:0,678:0:0:678:24191:-2175.98,-204.098,0	1/1:100:0,100:0:0:100:3583:-322.662,-30.103,0	1/1:678:2,676:2:72:676:24188:-2169.42,-197.262,0	1/1:415:0,415:0:0:415:14790:-1330.7,-124.927,0	0/1:259:115,144:115:4087:144:5140:-384.769,0,-290.049	1/1:32:0,32:0:0:32:1148:-103.63,-9.63296,0	1/1:57:0,57:0:0:57:2031:-183.051,-17.1587,0	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:33:18,15:18:648:15:536:-38.6408,0,-48.7179	1/1:447:0,447:0:0:447:15961:-1436.04,-134.56,0	0/1:294:145,149:145:5169:149:5350:-393.054,0,-376.848	0/1:161:77,84:77:2751:84:3016:-223.18,0,-199.366	1/1:7:0,7:0:0:7:252:-23.015,-2.10721,0	1/1:431:0,431:0:0:431:15385:-1384.34,-129.744,0	1/1:106:0,106:0:0:106:3793:-341.507,-31.9092,0	1/1:441:3,438:3:108:438:15638:-1396.96,-122.679,0	1/1:176:0,176:0:0:176:6276:-564.924,-52.9813,0	0/1:154:89,65:89:3166:65:2328:-163.421,0,-238.806	1/1:330:0,330:0:0:330:11794:-1061.31,-99.3399,0	0/1:385:174,211:174:6208:211:7534:-562.085,0,-442.923	1/1:385:0,384:0:0:384:13661:-1228.72,-115.596,0	1/1:333:0,333:0:0:333:11868:-1067.97,-100.243,0	1/1:372:0,372:0:0:372:13286:-1195.5,-111.983,0	1/1:393:0,393:0:0:393:14056:-1264.8,-118.305,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:530:0,530:0:0:530:19014:-1710.81,-159.546,0	1/1:126:0,126:0:0:126:4503:-405.436,-37.9298,0	1/1:48:0,48:0:0:48:1728:-155.797,-14.4494,0	0/1:363:186,177:186:6612:177:6328:-460.3,0,-485.889	0/1:104:60,44:60:2130:44:1576:-110.824,0,-160.66	0/1:28:17,11:17:612:11:388:-26.8285,0,-46.9846	1/1:64:0,64:0:0:64:2285:-205.91,-19.2659,0	1/1:211:0,211:0:0:211:7537:-678.279,-63.5173,0	0/1:254:134,120:134:4755:120:4273:-308.068,0,-351.65	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	1/1:598:0,598:0:0:598:21318:-1917.67,-180.016,0	1/1:496:2,494:2:72:494:17636:-1579.97,-142.474,0	1/1:158:2,156:2:72:156:5572:-494.753,-40.726,0	1/1:249:1,248:1:36:248:8862:-793.961,-71.3582,0	0/1:469:233,236:233:8264:236:8441:-618.496,0,-602.593	1/1:352:4,348:4:144:348:12406:-1103.06,-92.6489,0	1/1:123:0,123:0:0:123:4392:-395.447,-37.0267,0	1/1:221:0,221:0:0:221:7829:-704.365,-66.5276,0	0/1:180:86,94:86:3049:94:3371:-249.395,0,-220.454	1/1:61:0,61:0:0:61:2146:-193.357,-18.3628,0	1/1:204:0,204:0:0:204:7232:-650.647,-61.4101,0	0/1:275:145,130:145:5149:130:4659:-336.687,0,-380.771	1/1:369:0,369:0:0:369:13149:-1183.2,-111.08,0	1/1:476:0,475:0:0:475:16960:-1525.09,-142.989,0	1/1:288:2,286:2:72:286:10191:-909.739,-79.8599,0	1/1:311:4,307:4:144:307:10972:-973.879,-80.3067,0	1/1:36:0,36:0:0:36:1271:-114.684,-10.8371,0	1/1:339:0,338:0:0:338:12095:-1088,-101.748,0	0/1:409:204,205:204:7207:205:7275:-531.621,0,-525.565	0/1:647:302,345:302:10767:345:12291:-911.224,0,-774.175	1/1:194:0,194:0:0:194:6923:-623.117,-58.3998,0	1/1:207:0,207:0:0:207:7431:-668.764,-62.3132,0	0/1:199:104,95:104:3707:95:3399:-246.211,0,-273.928	0/1:392:191,200:191:6792:200:7127:-523.414,0,-493.293	0/1:95:40,55:40:1424:55:1972:-149.157,0,-99.8596	1/1:185:0,185:0:0:185:6577:-591.979,-55.6906,0	1/1:160:0,160:0:0:160:5720:-514.665,-48.1648,0	1/1:158:0,158:0:0:158:5646:-508.218,-47.5627,0	0/1:250:131,119:131:4668:119:4230:-305.516,0,-345.026	0/1:213:154,59:154:5472:59:2120:-126.947,0,-428.491	1/1:322:0,322:0:0:322:11450:-1030.21,-96.9317,0	1/1:290:1,289:1:36:289:10343:-927.186,-83.7004,0
chr02	2316854	.	T	C	137804	PASS	AB=0.496183;ABP=3.27552;AC=160;AF=0.851064;AN=188;AO=6315;CIGAR=1X;DP=7388;DPB=7388;DPRA=0;EPP=13715.9;EPPR=2313.46;GTI=1;LEN=1;MEANALT=1.09574;MQM=59.4076;MQMR=59.9352;NS=94;NUMALT=1;ODDS=6.30109;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=224082;QR=38072;RO=1064;RPL=6315;RPP=13715.9;RPPR=2313.46;RPR=0;RUN=1;SAF=6315;SAP=13715.9;SAR=0;SRF=1064;SRP=2313.46;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:10:0,10:0:0:10:356:-32.3635,-3.0103,0	1/1:55:0,55:0:0:55:1948:-175.576,-16.5567,0	1/1:180:0,180:0:0:180:6410:-576.674,-54.1854,0	0/1:224:113,111:113:4052:111:3959:-289.021,0,-297.436	1/1:41:0,41:0:0:41:1448:-130.256,-12.3422,0	1/1:10:0,10:0:0:10:356:-32.3635,-3.0103,0	1/1:92:0,92:0:0:92:3278:-294.802,-27.6948,0	1/1:160:0,159:0:0:159:5634:-506.128,-47.8638,0	1/1:45:0,45:0:0:45:1604:-144.596,-13.5464,0	1/1:64:0,64:0:0:64:2296:-206.884,-19.2659,0	1/1:69:0,69:0:0:69:2447:-220.277,-20.7711,0	1/1:76:0,76:0:0:76:2704:-243.574,-22.8783,0	1/1:58:0,58:0:0:58:2031:-182.956,-17.4597,0	0/1:66:32,34:32:1143:34:1220:-90.2113,0,-83.3107	1/1:36:0,36:0:0:36:1292:-116.54,-10.8371,0	0/1:55:33,22:33:1188:22:775:-53.5145,0,-90.6719	1/1:29:0,29:0:0:29:1008:-91.0142,-8.72987,0	0/1:18:4,14:4:144:14:487:-38.7407,0,-7.89508	1/1:14:0,14:0:0:14:494:-44.7885,-4.21442,0	0/1:207:103,104:103:3680:104:3697:-270.588,0,-269.091	0/1:98:58,40:58:2084:40:1398:-96.5868,0,-158.329	1/1:120:0,120:0:0:120:4274:-384.768,-36.1236,0	1/1:94:1,92:1:36:92:3241:-288.199,-24.7573,0	0/1:23:16,7:16:576:7:248:-15.7405,0,-45.2513	1/1:68:0,68:0:0:68:2383:-214.705,-20.47,0	1/1:222:0,222:0:0:222:7867:-707.758,-66.8287,0	1/1:183:0,183:0:0:183:6506:-585.424,-55.0885,0	1/1:21:0,21:0:0:21:725:-65.4528,-6.32163,0	1/1:221:1,219:1:36:219:7775:-694.973,-62.9882,0	1/1:110:0,109:0:0:109:3842:-345.639,-32.8123,0	0/1:66:33,33:33:1152:33:1169:-85.6465,0,-84.1154	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:39:0,39:0:0:39:1396:-125.932,-11.7402,0	1/1:14:0,14:0:0:14:495:-44.883,-4.21442,0	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	1/1:130:0,130:0:0:130:4609:-414.895,-39.1339,0	0/1:116:65,51:65:2336:51:1832:-130.224,0,-175.262	0/1:31:18,13:18:644:13:464:-32.7067,0,-48.9587	1/1:4:0,4:0:0:4:129:-11.9277,-1.20412,0	1/1:98:0,98:0:0:98:3463:-311.065,-29.5009,0	1/1:25:0,25:0:0:25:880:-79.5039,-7.52575,0	1/1:117:0,117:0:0:117:4139:-372.584,-35.2205,0	1/1:37:0,37:0:0:37:1332:-120.153,-11.1381,0	0/1:40:27,13:27:956:13:447:-28.5027,0,-74.3113	1/1:117:0,117:0:0:117:4146:-373.215,-35.2205,0	0/1:60:38,22:38:1364:22:792:-53.5439,0,-104.999	1/1:88:0,88:0:0:88:3095:-278.672,-26.4906,0	1/1:83:0,83:0:0:83:2958:-266.219,-24.9855,0	1/1:135:0,135:0:0:135:4783:-430.54,-40.6391,0	1/1:147:0,147:0:0:147:5194:-467.332,-44.2514,0	1/1:15:0,15:0:0:15:540:-48.9227,-4.51545,0	1/1:202:0,202:0:0:202:7206:-648.185,-60.8081,0	1/1:68:0,67:0:0:67:2395:-215.427,-20.169,0	1/1:12:0,12:0:0:12:419:-38.0345,-3.61236,0	0/1:137:72,65:72:2579:65:2281:-164.269,0,-191.114	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	1/1:26:0,26:0:0:26:914:-82.5747,-7.82678,0	1/1:77:0,76:0:0:76:2693:-242.223,-22.8783,0	0/1:100:58,42:58:2088:42:1487:-103.993,0,-158.087	1/1:11:0,11:0:0:11:383:-34.7617,-3.31133,0	1/1:118:0,118:0:0:118:4222:-380.06,-35.5215,0	1/1:141:0,141:0:0:141:5036:-452.22,-42.4452,0	0/1:83:8,75:8:288:75:2655:-214.028,0,-1.28192	1/1:94:0,94:0:0:94:3330:-299.864,-28.2968,0	0/1:117:60,57:60:2152:57:2023:-147.077,0,-158.727	1/1:245:4,241:4:144:241:8560:-756.962,-60.4387,0	1/1:34:0,33:0:0:33:1162:-104.515,-9.93399,0	1/1:60:1,58:1:36:58:2070:-182.945,-14.5223,0	0/1:43:21,22:21:748:22:792:-58.661,0,-54.701	1/1:28:0,28:0:0:28:932:-84.1228,-8.42884,0	1/1:124:0,124:0:0:124:4383:-394.285,-37.3277,0	0/1:28:18,10:18:648:10:351:-23.4978,0,-50.223	1/1:97:0,97:0:0:97:3463:-311.824,-29.1999,0	1/1:110:0,110:0:0:110:3922:-353.042,-33.1133,0	1/1:162:0,162:0:0:162:5750:-517.539,-48.7669,0	1/1:77:1,76:1:36:76:2707:-240.259,-19.581,0	1/1:18:0,18:0:0:18:639:-57.7721,-5.41854,0	1/1:92:0,92:0:0:92:3269:-294.414,-27.6948,0	0/1:103:41,62:41:1476:62:2191:-166.421,0,-102.13	0/1:144:79,65:79:2840:65:2319:-165.607,0,-212.476	1/1:60:0,60:0:0:60:2140:-192.745,-18.0618,0	1/1:46:0,46:0:0:46:1648:-148.566,-13.8474,0	0/1:23:8,15:8:288:15:532:-41.2894,0,-19.3437	0/1:89:44,45:44:1552:45:1611:-118.474,0,-113.177	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	1/1:51:0,51:0:0:51:1782:-160.595,-15.3525,0	1/1:57:0,57:0:0:57:2040:-183.817,-17.1587,0	1/1:39:0,39:0:0:39:1380:-124.366,-11.7402,0	0/1:143:61,81:61:2163:81:2868:-215.13,0,-151.827	0/1:39:21,18:21:743:18:648:-46.6407,0,-55.4532	1/1:123:0,123:0:0:123:4370:-393.367,-37.0267,0	1/1:65:1,64:1:36:64:2255:-199.595,-15.9687,0
chr02	2369077	.	A	G	81780	PASS	AB=0.493706;ABP=5.52526;AC=30;AF=0.159574;AN=188;AO=3641;CIGAR=1X;DP=22253;DPB=22253;DPRA=1.25556;EPP=7909.34;EPPR=40388.1;GTI=0;LEN=1;MEANALT=1.03922;MQM=59.9885;MQMR=59.9932;NS=94;NUMALT=1;ODDS=6.75626;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129214;QR=659839;RO=18606;RPL=1953;RPP=44.8921;RPPR=3.19703;RPR=1688;RUN=1;SAF=1953;SAP=44.8921;SAR=1688;SRF=9281;SRP=3.23625;SRR=9325;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:95:95,0:95:3371:0:0:0,-28.5978,-303.608	0/0:318:316,1:316:11263:1:36:0,-92.1881,-1009.96	0/0:280:280,0:280:9966:0:0:0,-84.2884,-896.516	0/1:360:186,174:186:6584:174:6177:-447.66,0,-484.277	0/1:157:70,87:70:2503:87:3075:-229.716,0,-178.26	0/1:140:78,62:78:2768:62:2220:-157.92,0,-207.219	0/0:353:352,1:352:12459:1:36:0,-102.665,-1117.56	0/0:241:240,1:240:8503:1:36:0,-68.95,-761.682	0/0:284:284,0:284:10143:0:0:0,-85.4925,-912.804	0/0:261:261,0:261:9281:0:0:0,-78.5688,-835.262	0/0:172:172,0:172:6100:0:0:0,-51.7772,-549.103	0/0:198:198,0:198:7004:0:0:0,-59.6039,-630.43	0/0:254:254,0:254:9002:0:0:0,-76.4616,-810.169	0/1:240:118,122:118:4185:122:4288:-313.853,0,-304.587	0/0:211:211,0:211:7461:0:0:0,-63.5173,-671.542	0/1:204:107,95:107:3827:95:3353:-239.881,0,-283.459	0/0:199:199,0:199:7098:0:0:0,-59.905,-638.881	0/1:183:94,89:94:3352:89:3159:-229.448,0,-246.809	0/0:130:130,0:130:4643:0:0:0,-39.1339,-418.033	0/1:485:251,234:251:8930:234:8320:-602.811,0,-657.56	0/1:322:166,156:166:5902:156:5486:-396.942,0,-434.362	0/0:165:165,0:165:5882:0:0:0,-49.6699,-529.492	0/0:243:240,3:240:8500:3:108:0,-63.0751,-754.804	0/1:244:121,123:121:4303:123:4328:-316.247,0,-313.995	0/0:214:214,0:214:7511:0:0:0,-64.4204,-676.044	0/0:615:614,0:614:21766:0:0:0,-184.832,-1958.11	0/0:474:474,0:474:16824:0:0:0,-142.688,-1513.83	0/0:109:108,1:108:3811:1:36:0,-29.214,-339.591	0/0:508:507,1:507:17976:1:36:0,-149.325,-1613.86	0/0:282:282,0:282:10044:0:0:0,-84.8905,-903.9	0/1:208:98,110:98:3460:110:3875:-286.332,0,-249	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.863	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:30:30,0:30:1065:0:0:0,-9.0309,-96.1598	0/1:35:24,11:24:860:11:396:-25.4467,0,-67.1858	0/0:598:596,2:596:21142:2:72:0,-173.179,-1895.43	0/1:279:145,134:145:5111:134:4762:-344.75,0,-376.149	0/1:209:96,113:96:3410:113:4032:-300.154,0,-244.2	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:315:314,1:314:11196:1:36:0,-91.2262,-1003.56	0/0:137:136,1:136:4820:1:36:0,-37.6428,-430.36	0/0:303:303,0:303:10730:0:0:0,-91.2121,-965.618	0/0:218:217,1:217:7709:1:32:0,-62.4252,-690.651	0/1:152:85,67:85:3030:67:2363:-167.17,0,-227.173	0/0:283:282,1:282:9941:1:36:0,-81.5932,-891.043	0/1:285:130,155:130:4648:155:5461:-405.825,0,-332.689	0/0:329:325,4:325:11512:4:144:0,-85.7252,-1022.65	0/0:343:342,0:342:12097:0:0:0,-102.952,-1088.38	0/0:281:280,1:280:9897:1:36:0,-80.9912,-887.078	0/0:330:329,1:329:11595:1:36:0,-95.7416,-1039.84	0/1:20:12,8:12:415:8:275:-19.0629,0,-31.6597	0/0:312:312,0:312:11119:0:0:0,-93.9214,-1000.61	0/0:106:106,0:106:3775:0:0:0,-31.9092,-339.95	0/0:39:39,0:39:1387:0:0:0,-11.7402,-125.128	0/1:329:171,158:171:6031:158:5598:-404.906,0,-443.861	0/1:209:111,98:111:3910:98:3472:-249.777,0,-289.18	0/1:28:19,9:19:675:9:324:-21.077,0,-52.6481	0/0:328:328,0:328:11642:0:0:0,-98.7378,-1047.65	0/0:213:213,0:213:7529:0:0:0,-64.1194,-677.66	0/1:276:159,117:159:5669:117:4164:-291.858,0,-427.246	0/0:17:17,0:17:599:0:0:0,-5.11751,-54.2381	0/0:385:384,0:384:13643:0:0:0,-115.596,-1227.41	0/0:419:418,1:418:14756:1:36:0,-122.533,-1324.2	0/0:137:132,5:132:4666:5:180:0,-24.689,-403.552	0/0:203:203,0:203:7204:0:0:0,-61.1091,-648.421	0/1:338:187,151:187:6614:151:5364:-381.147,0,-493.596	0/0:230:230,0:230:8202:0:0:0,-69.2369,-738.196	0/0:65:65,0:65:2298:0:0:0,-19.5669,-207.081	0/0:180:180,0:180:6380:0:0:0,-54.1854,-574.295	0/1:223:117,106:117:4174:106:3786:-273.808,0,-308.713	0/0:29:29,0:29:1017:0:0:0,-8.72987,-91.8398	0/0:266:265,1:265:9405:1:36:0,-76.4757,-842.822	0/1:169:72,97:72:2580:97:3468:-261.458,0,-181.575	0/0:400:400,0:400:14139:0:0:0,-120.412,-1272.29	0/0:323:323,0:323:11414:0:0:0,-97.2327,-1027.15	0/0:202:201,1:201:7166:1:36:0,-57.2098,-641.398	0/0:233:230,3:230:8161:3:108:0,-60.0648,-724.438	0/0:23:23,0:23:816:0:0:0,-6.92369,-73.7617	0/0:216:215,1:215:7595:1:36:0,-61.4242,-679.998	0/1:218:110,108:110:3924:108:3851:-281.162,0,-287.73	0/1:567:305,262:305:10792:262:9344:-670.243,0,-800.511	0/0:294:294,0:294:10419:0:0:0,-88.5028,-937.643	0/0:215:215,0:215:7614:0:0:0,-64.7214,-685.305	0/1:285:138,147:138:4863:147:5208:-383.068,0,-352.035	0/1:431:211,220:211:7496:220:7814:-573.551,0,-544.944	0/1:137:77,60:77:2723:60:2123:-150.097,0,-204.074	0/0:269:268,1:268:9498:1:36:0,-77.3788,-851.191	0/0:241:241,0:241:8591:0:0:0,-72.5482,-773.191	0/0:141:141,0:141:4979:0:0:0,-42.4452,-448.263	0/1:251:121,130:121:4265:130:4628:-341.128,0,-308.472	0/1:324:119,205:119:4228:205:7316:-560.957,0,-283.17	0/0:325:325,0:325:11451:0:0:0,-97.8347,-1030.48	0/0:294:294,0:294:10434:0:0:0,-88.5028,-938.989
chr02	2570942	.	A	G	28791.1	PASS	AB=0.429877;ABP=138.531;AC=35;AF=0.18617;AN=188;AO=1612;CIGAR=1X;DP=10440;DPB=10440;DPRA=1.06054;EPP=2953.63;EPPR=19155.4;GTI=2;LEN=1;MEANALT=1.02632;MQM=59.7996;MQMR=59.9806;NS=94;NUMALT=1;ODDS=2.74997;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57698;QR=311795;RO=8824;RPL=66;RPP=2953.63;RPPR=19155.4;RPR=1546;RUN=1;SAF=1612;SAP=3503.42;SAR=0;SRF=8822;SRP=19146.7;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:60:60,0:60:2137:0:0:0,-18.0618,-192.596	0/0:150:150,0:150:5257:0:0:0,-45.1545,-473.265	0/0:155:152,3:152:5335:3:108:0,-36.5845,-470.213	0/1:141:121,20:121:4285:20:716:-22.3225,0,-343.383	0/1:44:36,8:36:1265:8:288:-13.0212,0,-100.905	0/1:59:41,18:41:1448:18:648:-40.8911,0,-112.855	0/0:172:172,0:172:6137:0:0:0,-51.7772,-552.429	0/0:183:183,0:183:6496:0:0:0,-55.0885,-584.732	0/0:133:132,1:132:4643:1:36:0,-36.4387,-414.42	0/0:125:125,0:125:4449:0:0:0,-37.6287,-400.582	0/0:57:57,0:57:2036:0:0:0,-17.1587,-183.512	0/0:85:85,0:85:3035:0:0:0,-25.5875,-273.38	0/0:111:111,0:111:3937:0:0:0,-33.4143,-354.524	0/1:60:23,36:23:812:36:1292:-98.4632,0,-55.2699	0/0:86:86,0:86:3041:0:0:0,-25.8886,-273.921	0/1:58:30,28:30:1051:28:1008:-73.566,0,-77.4399	0/0:61:61,0:61:2153:0:0:0,-18.3628,-194.036	0/1:70:30,40:30:1030:40:1415:-106.568,0,-71.9322	0/0:57:56,1:56:1960:1:36:0,-13.5604,-173.075	0/1:161:108,53:108:3841:53:1904:-123.172,0,-297.421	0/1:95:70,25:70:2488:25:890:-51.8213,0,-195.576	0/0:122:122,0:122:4284:0:0:0,-36.7257,-385.739	0/0:78:78,0:78:2746:0:0:0,-23.4803,-247.381	0/1:115:92,23:92:3265:23:798:-37.5156,0,-259.452	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/0:357:354,3:354:12537:3:108:0,-97.3925,-1118.09	0/0:313:312,0:312:11053:0:0:0,-93.9214,-994.312	0/0:52:52,0:52:1811:0:0:0,-15.6536,-163.255	0/0:255:255,0:255:9061:0:0:0,-76.7626,-815.47	0/0:159:159,0:159:5607:0:0:0,-47.8638,-504.757	0/1:82:67,15:67:2339:15:521:-22.5319,0,-186.082	0/0:12:12,0:12:416:0:0:0,-3.61236,-37.7716	0/0:38:38,0:38:1356:0:0:0,-11.4391,-122.34	0/0:7:7,0:7:233:0:0:0,-2.10721,-21.2943	0/0:12:12,0:12:420:0:0:0,-3.61236,-38.134	1/1:118:5,113:5:165:113:4044:-348.73,-20.3479,0	0/0:251:250,0:250:8842:0:0:0,-75.2575,-795.416	0/1:62:55,7:55:1953:7:252:-4.3651,0,-157.38	0/1:250:64,186:64:2259:186:6680:-525.531,0,-128.316	0/1:44:5,39:5:180:39:1385:-111.702,0,-3.30674	0/0:189:189,0:189:6641:0:0:0,-56.8947,-597.776	0/0:70:70,0:70:2467:0:0:0,-21.0721,-222.285	0/0:78:78,0:78:2742:0:0:0,-23.4803,-247.022	0/0:113:113,0:113:3972:0:0:0,-34.0164,-357.676	0/1:90:38,52:38:1345:52:1868:-141.307,0,-94.2555	0/0:158:158,0:158:5578:0:0:0,-47.5627,-502.149	0/1:98:87,11:87:3054:11:392:-6.11637,0,-245.589	0/0:166:166,0:166:5851:0:0:0,-49.971,-526.708	0/0:170:170,0:170:6027:0:0:0,-51.1751,-542.536	0/0:133:133,0:133:4740:0:0:0,-40.037,-426.761	0/0:230:230,0:230:8144:0:0:0,-69.2369,-732.981	1/1:35:2,33:2:72:33:1180:-99.6713,-3.69933,0	0/0:160:160,0:160:5681:0:0:0,-48.1648,-511.413	0/0:48:48,0:48:1701:0:0:0,-14.4494,-153.374	0/0:23:23,0:23:794:0:0:0,-6.92369,-71.7733	0/1:108:89,19:89:3140:19:674:-28.4759,0,-250.298	0/1:42:32,10:32:1129:10:360:-20.101,0,-89.2731	1/1:99:7,92:7:240:92:3304:-275.639,-7.86731,0	0/0:23:23,0:23:809:0:0:0,-6.92369,-73.1283	0/0:86:86,0:86:3048:0:0:0,-25.8886,-274.549	0/1:111:58,53:58:2056:53:1908:-138.583,0,-151.897	0/0:10:10,0:10:348:0:0:0,-3.0103,-31.6444	0/0:236:236,0:236:8329:0:0:0,-71.0431,-749.6	0/1:168:128,40:128:4541:40:1422:-77.6742,0,-358.263	0/0:61:61,0:61:2157:0:0:0,-18.3628,-194.396	0/0:95:95,0:95:3340:0:0:0,-28.5978,-300.815	0/1:157:108,49:108:3766:49:1752:-110.702,0,-291.881	0/0:122:121,1:121:4237:1:36:0,-33.1771,-377.961	0/0:19:19,0:19:664:0:0:0,-5.71957,-60.0845	0/0:113:113,0:113:4003:0:0:0,-34.0164,-360.463	0/1:103:36,67:36:1257:67:2408:-185.969,0,-82.4241	0/0:26:26,0:26:913:0:0:0,-7.82678,-82.484	0/0:122:122,0:122:4314:0:0:0,-36.7257,-388.438	0/1:53:39,14:39:1392:14:500:-29.3773,0,-109.624	0/0:193:193,0:193:6851:0:0:0,-58.0988,-615.643	0/0:203:203,0:203:7130:0:0:0,-61.1091,-641.755	0/0:120:119,1:119:4176:1:36:0,-32.5253,-372.409	0/0:152:152,0:152:5386:0:0:0,-45.7566,-484.874	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:125:125,0:125:4464:0:0:0,-37.6287,-401.931	0/1:68:54,14:54:1936:14:504:-25.2281,0,-154.046	0/1:174:149,25:149:5275:25:892:-28.2205,0,-422.508	0/0:115:115,0:115:4048:0:0:0,-34.6184,-364.507	0/0:62:62,0:62:2215:0:0:0,-18.6639,-199.508	0/1:126:48,78:48:1696:78:2792:-213.591,0,-114.996	0/1:152:83,69:83:2956:69:2484:-178.039,0,-220.518	0/1:43:30,13:30:1038:13:460:-28.7911,0,-80.7808	0/0:90:89,0:89:3161:0:0:0,-26.7917,-284.355	0/0:84:84,0:84:2956:0:0:0,-25.2865,-266.277	0/0:21:21,0:21:710:0:0:0,-6.32163,-64.2121	0/1:265:53,212:53:1868:212:7573:-601.776,0,-88.6237	0/1:174:34,140:34:1163:140:5024:-398.651,0,-52.5882	0/0:106:106,0:106:3715:0:0:0,-31.9092,-334.553	0/0:120:120,0:120:4264:0:0:0,-36.1236,-383.942
chr02	2880882	.	T	C	208183	PASS	AB=0.67696;ABP=786.91;AC=156;AF=0.829787;AN=188;AO=9415;CIGAR=1X;DP=10356;DPB=10356;DPRA=0;EPP=20447.4;EPPR=2033.34;GTI=5;LEN=1;MEANALT=1.06383;MQM=59.9604;MQMR=60;NS=94;NUMALT=1;ODDS=4.19818;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=337006;QR=33428;RO=935;RPL=0;RPP=20447.4;RPPR=2033.34;RPR=9415;RUN=1;SAF=9415;SAP=20447.4;SAR=0;SRF=935;SRP=2033.34;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	1/1:140:0,140:0:0:140:4995:-449.698,-42.1442,0	1/1:142:0,142:0:0:142:5061:-455.631,-42.7463,0	0/1:153:42,110:42:1504:110:3922:-307.055,0,-89.5382	0/1:64:12,52:12:419:52:1851:-147.603,0,-18.7768	0/1:56:16,40:16:572:40:1427:-111.841,0,-34.9557	1/1:138:0,138:0:0:138:4921:-443.041,-41.5421,0	1/1:194:1,193:1:36:193:6903:-617.737,-54.8015,0	1/1:95:0,95:0:0:95:3392:-305.496,-28.5979,0	1/1:164:0,164:0:0:164:5876:-528.95,-49.3689,0	1/1:94:0,94:0:0:94:3368:-303.336,-28.2968,0	1/1:91:0,91:0:0:91:3268:-294.34,-27.3937,0	1/1:71:0,71:0:0:71:2544:-229.211,-21.3731,0	0/1:83:29,54:29:1031:54:1936:-149.513,0,-68.1171	0/1:62:22,40:22:788:40:1432:-110.513,0,-52.5809	0/1:49:9,40:9:324:40:1428:-114.067,0,-14.7554	1/1:83:0,83:0:0:83:2980:-268.427,-24.9855,0	0/1:70:19,51:19:667:51:1832:-144.089,0,-39.2825	1/1:44:0,44:0:0:44:1567:-141.321,-13.2453,0	0/1:126:31,95:31:1108:95:3391:-267.476,0,-62.1012	0/1:91:35,56:35:1233:56:2016:-154.315,0,-83.8784	1/1:142:0,142:0:0:142:5066:-456.085,-42.7463,0	1/1:63:0,63:0:0:63:2256:-203.303,-18.9649,0	0/1:39:13,26:13:468:26:936:-72.8189,0,-30.7195	1/1:60:0,60:0:0:60:2147:-193.497,-18.0618,0	1/1:512:0,512:0:0:512:18334:-1649.64,-154.127,0	1/1:243:0,243:0:0:243:8674:-780.655,-73.1503,0	1/1:29:0,29:0:0:29:1036:-93.5539,-8.72987,0	1/1:247:0,247:0:0:247:8854:-796.684,-74.3544,0	1/1:252:0,252:0:0:252:8991:-809.146,-75.8596,0	0/1:135:51,83:51:1828:83:2968:-226.655,0,-124.103	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:12:2,10:2:72:10:356:-28.7689,0,-3.22436	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	1/1:245:0,245:0:0:245:8780:-789.997,-73.7524,0	0/1:211:62,149:62:2220:149:5307:-414.218,0,-136.547	0/1:55:17,38:17:608:38:1364:-106.504,0,-38.4954	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:186:0,186:0:0:186:6666:-599.588,-55.9916,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:195:0,195:0:0:195:6957:-626.192,-58.7009,0	1/1:88:0,88:0:0:88:3147:-283.455,-26.4906,0	0/1:61:22,39:22:784:39:1404:-108.296,0,-52.5211	1/1:89:0,89:0:0:89:3200:-288.222,-26.7917,0	0/1:129:31,98:31:1112:98:3512:-277.456,0,-61.5585	1/1:318:0,318:0:0:318:11390:-1024.98,-95.7275,0	1/1:138:0,138:0:0:138:4936:-444.388,-41.5421,0	1/1:270:0,270:0:0:270:9665:-869.782,-81.2781,0	1/1:190:0,190:0:0:190:6828:-614.587,-57.1957,0	0/1:15:4,11:4:144:11:396:-31.4673,0,-8.79817	1/1:144:0,144:0:0:144:5163:-464.809,-43.3483,0	1/1:55:0,55:0:0:55:1965:-177.123,-16.5567,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:116:27,89:27:968:89:3188:-252.213,0,-52.5179	0/1:55:34,21:34:1211:21:752:-51.4496,0,-92.7389	1/1:15:1,14:1:36:14:504:-42.0998,-0.917175,0	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	1/1:105:0,105:0:0:105:3768:-339.318,-31.6082,0	0/1:128:53,75:53:1900:75:2677:-202.642,0,-132.746	1/1:8:0,8:0:0:8:288:-26.1802,-2.40824,0	1/1:270:0,269:0:0:269:9629:-866.2,-80.9771,0	0/1:201:61,140:61:2184:140:5016:-391.079,0,-136.319	1/1:102:1,100:1:36:100:3555:-316.542,-27.1656,0	1/1:86:0,86:0:0:86:3048:-274.552,-25.8886,0	0/1:149:61,88:61:2184:88:3160:-239.771,0,-151.972	1/1:143:1,142:1:36:142:5096:-455.184,-39.449,0	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	1/1:73:0,73:0:0:73:2600:-234.221,-21.9752,0	0/1:91:43,48:43:1544:48:1712:-126.972,0,-111.859	1/1:46:0,46:0:0:46:1652:-148.96,-13.8474,0	1/1:148:0,148:0:0:148:5295:-476.656,-44.5524,0	0/1:61:16,45:16:572:45:1616:-127.367,0,-33.4506	1/1:312:1,311:1:36:311:11129:-997.875,-90.3231,0	1/1:163:0,163:0:0:163:5852:-526.79,-49.0679,0	1/1:161:0,160:0:0:160:5733:-515.873,-48.1648,0	1/1:162:1,161:1:36:161:5784:-517.074,-45.1686,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:134:0,133:0:0:133:4776:-429.635,-40.037,0	0/1:108:29,79:29:1035:79:2831:-222.517,0,-60.9518	0/1:193:65,128:65:2328:128:4583:-354.527,0,-151.681	1/1:128:0,128:0:0:128:4590:-412.947,-38.5318,0	1/1:68:0,68:0:0:68:2435:-219.405,-20.47,0	0/1:61:16,45:16:564:45:1616:-127.359,0,-32.7275	0/1:129:39,90:39:1396:90:3223:-251.45,0,-87.1062	0/1:36:14,22:14:500:22:792:-60.7686,0,-34.4991	1/1:104:0,104:0:0:104:3731:-335.961,-31.3071,0	1/1:84:0,84:0:0:84:3020:-272.03,-25.2865,0	1/1:54:0,54:0:0:54:1936:-174.516,-16.2556,0	0/1:92:32,60:32:1152:60:2143:-165.425,0,-76.2954	0/1:45:18,27:18:648:27:968:-73.891,0,-45.1055	1/1:89:0,89:0:0:89:3185:-286.872,-26.7917,0	1/1:119:0,119:0:0:119:4263:-383.847,-35.8226,0
chr02	2880904	.	C	T	11348.8	PASS	AB=0.319861;ABP=811.945;AC=32;AF=0.170213;AN=188;AO=924;CIGAR=1X;DP=10335;DPB=10335;DPRA=0.844156;EPP=1966.26;EPPR=20176.8;GTI=4;LEN=1;MEANALT=1;MQM=59.9989;MQMR=59.9609;NS=94;NUMALT=1;ODDS=5.98427;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=32902;QR=335504;RO=9410;RPL=919;RPP=1966.26;RPPR=20176.8;RPR=5;RUN=1;SAF=924;SAP=2009.45;SAR=0;SRF=9410;SRP=20436.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:22:22,0:22:773:0:0:0,-6.62266,-69.8895	0/0:138:138,0:138:4915:0:0:0,-41.5421,-442.501	0/0:140:140,0:140:4941:0:0:0,-42.1442,-444.829	0/1:152:112,40:112:4016:40:1395:-80.0853,0,-315.872	0/1:64:51,13:51:1832:13:468:-23.1937,0,-145.895	0/1:52:38,14:38:1351:14:504:-30.0445,0,-106.236	0/0:137:137,0:137:4908:0:0:0,-41.2411,-441.871	0/0:192:192,0:192:6853:0:0:0,-57.7978,-616.84	0/0:94:94,0:94:3350:0:0:0,-28.2968,-301.717	0/0:162:162,0:162:5778:0:0:0,-48.7669,-520.133	0/0:93:93,0:93:3298:0:0:0,-27.9958,-297.04	0/0:92:92,0:92:3292:0:0:0,-27.6948,-296.499	0/0:70:70,0:70:2503:0:0:0,-21.0721,-225.522	0/1:83:54,29:54:1931:29:1036:-68.5684,0,-149.063	0/1:62:40,22:40:1423:22:792:-52.9418,0,-109.703	0/1:49:39,10:39:1381:10:350:-17.0855,0,-109.836	0/0:81:81,0:81:2891:0:0:0,-24.3834,-260.421	0/1:69:52,17:52:1842:17:595:-33.1056,0,-145.288	0/0:45:45,0:45:1597:0:0:0,-13.5463,-144.018	0/1:126:92,34:92:3287:34:1220:-72.177,0,-258.12	0/1:93:57,36:57:2043:36:1285:-87.9565,0,-156.141	0/0:141:141,0:141:5020:0:0:0,-42.4452,-451.947	0/0:64:64,0:64:2304:0:0:0,-19.2659,-207.62	0/1:39:26,13:26:927:13:460:-29.9952,0,-72.0068	0/0:61:61,0:61:2160:0:0:0,-18.3628,-194.665	0/0:517:517,0:517:18441:0:0:0,-155.633,-1659.28	0/0:245:245,0:245:8724:0:0:0,-73.7523,-785.155	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/0:249:249,0:249:8879:0:0:0,-74.9565,-798.935	0/0:252:251,0:251:8938:0:0:0,-75.5585,-804.022	0/1:131:83,48:83:2976:48:1716:-115.291,0,-228.637	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:244:244,0:244:8717:0:0:0,-73.4513,-784.492	0/1:217:156,61:156:5567:61:2160:-129.342,0,-435.803	0/1:53:37,16:37:1324:16:568:-35.4973,0,-103.508	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:185:185,0:185:6568:0:0:0,-55.6905,-590.773	0/0:24:24,0:24:855:0:0:0,-7.22472,-77.2702	0/0:190:190,0:190:6761:0:0:0,-57.1957,-608.547	0/0:88:88,0:88:3132:0:0:0,-26.4906,-282.105	0/1:62:39,23:39:1404:23:808:-54.3759,0,-107.995	0/0:89:89,0:89:3168:0:0:0,-26.7917,-285.343	0/1:133:100,33:100:3592:33:1180:-66.4711,0,-283.449	0/0:313:313,0:313:11169:0:0:0,-94.2224,-1005.1	0/0:140:140,0:140:4944:0:0:0,-42.1442,-445.11	0/0:269:269,0:269:9584:0:0:0,-80.9771,-862.496	0/0:188:188,0:188:6709:0:0:0,-56.5936,-603.883	0/1:14:10,4:10:356:4:144:-9.0992,0,-28.1668	0/0:143:143,0:143:5129:0:0:0,-43.0473,-461.749	0/0:54:54,0:54:1932:0:0:0,-16.2556,-174.157	0/0:16:16,0:16:563:0:0:0,-4.81648,-50.9992	0/1:116:89,27:89:3152:27:972:-52.8784,0,-248.974	0/1:54:21,33:21:752:33:1175:-89.8013,0,-51.7506	0/0:15:14,1:14:504:1:36:0,-0.917175,-42.0998	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:104:104,0:104:3727:0:0:0,-31.3071,-335.63	0/1:127:75,52:75:2668:52:1860:-129.449,0,-202.133	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.8161	0/0:272:272,0:272:9712:0:0:0,-81.8802,-874.026	0/1:199:140,59:140:5001:59:2124:-131.523,0,-390.332	0/0:102:101,1:101:3604:1:36:0,-27.1068,-320.948	0/0:90:90,0:90:3209:0:0:0,-27.0927,-289.032	0/1:150:90,60:90:3219:60:2118:-145.731,0,-244.777	0/0:145:144,1:144:5146:1:36:0,-40.0511,-459.683	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/0:73:73,0:73:2588:0:0:0,-21.9752,-233.17	0/1:91:48,43:48:1698:43:1526:-110.239,0,-125.711	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:152:152,0:152:5402:0:0:0,-45.7566,-486.281	0/1:61:45,16:45:1605:16:572:-33.4506,0,-126.375	0/0:307:306,1:306:10891:1:36:0,-88.8179,-976.454	0/0:165:164,1:164:5876:1:36:0,-46.0717,-525.352	0/0:161:161,0:161:5743:0:0:0,-48.4658,-516.985	0/0:160:159,1:159:5671:1:36:0,-44.5665,-506.908	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:133:133,0:133:4750:0:0:0,-40.037,-427.657	0/1:106:78,28:78:2768:28:1000:-58.4062,0,-217.451	0/1:192:126,66:126:4497:66:2350:-153.96,0,-347.087	0/0:127:127,0:127:4502:0:0:0,-38.2308,-405.032	0/0:68:68,0:68:2404:0:0:0,-20.47,-216.615	0/1:60:45,15:45:1582:15:527:-29.6984,0,-124.601	0/1:126:89,37:89:3175:37:1315:-80.7212,0,-248.036	0/1:35:22,13:22:792:13:464:-31.5615,0,-61.0696	0/0:107:107,0:107:3811:0:0:0,-32.2102,-343.16	0/0:85:85,0:85:3017:0:0:0,-25.5875,-271.131	0/0:53:53,0:53:1892:0:0:0,-15.9546,-170.558	0/1:91:60,31:60:2120:31:1107:-72.5473,0,-163.666	0/1:46:27,19:27:968:19:679:-47.5916,0,-73.59	0/0:91:91,0:91:3242:0:0:0,-27.3937,-292.001	0/0:120:120,0:120:4308:0:0:0,-36.1236,-387.895
chr02	2945042	.	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chr02	2945057	.	T	G	45403	PASS	AB=0.488216;ABP=9.66329;AC=34;AF=0.180851;AN=188;AO=2701;CIGAR=1X;DP=15065;DPB=15065;DPRA=1.05385;EPP=5850.8;EPPR=26692.8;GTI=1;LEN=1;MEANALT=1.10256;MQM=59.5946;MQMR=59.7221;NS=94;NUMALT=1;ODDS=3.41078;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96608;QR=442833;RO=12355;RPL=1;RPP=5859.47;RPPR=26701.4;RPR=2700;RUN=1;SAF=2700;SAP=5859.47;SAR=1;SRF=12354;SRP=26822.9;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.67	0/0:301:301,0:301:10815:0:0:0,-90.61,-973.182	0/0:171:171,0:171:6131:0:0:0,-51.4761,-551.664	0/1:326:154,171:154:5507:171:6116:-452.031,0,-397.555	0/1:127:55,72:55:1959:72:2572:-193.493,0,-138.349	0/1:115:52,63:52:1864:63:2264:-169.401,0,-133.413	0/0:242:241,1:241:8639:1:36:0,-69.251,-773.888	0/0:282:282,0:282:10105:0:0:0,-84.8905,-909.319	0/0:190:189,1:189:6776:1:36:0,-53.5974,-605.839	0/0:182:182,0:182:6488:0:0:0,-54.7875,-583.962	0/0:73:73,0:73:2616:0:0:0,-21.9752,-235.657	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.148	0/0:101:101,0:101:3632:0:0:0,-30.404,-327.035	0/1:104:53,51:53:1891:51:1828:-133.364,0,-139.151	0/1:111:69,42:69:2480:42:1512:-102.953,0,-190.023	0/1:71:39,32:39:1404:32:1152:-82.5886,0,-105.285	0/0:72:71,0:71:2539:0:0:0,-21.3731,-228.357	0/1:97:50,47:50:1800:47:1684:-122.628,0,-133.066	0/0:88:88,0:88:3148:0:0:0,-26.4906,-283.529	0/1:416:234,181:234:8388:181:6491:-459.001,0,-629.611	0/1:294:136,158:136:4884:158:5618:-417.066,0,-351.18	0/0:195:195,0:195:7000:0:0:0,-58.7008,-629.942	0/0:219:219,0:219:7844:0:0:0,-65.9256,-705.648	0/1:217:140,77:140:5016:77:2749:-182.327,0,-385.463	0/0:113:113,0:113:4044:0:0:0,-34.0164,-363.89	0/0:491:489,0:489:17505:0:0:0,-147.204,-1574.39	0/0:169:169,0:169:6063:0:0:0,-50.8741,-545.75	0/0:49:49,0:49:1751:0:0:0,-14.7505,-157.869	0/0:475:475,0:475:17064:0:0:0,-142.989,-1535.22	0/0:185:185,0:185:6626:0:0:0,-55.6905,-596.381	0/1:271:146,125:146:5230:125:4496:-323.096,0,-388.98	0/0:25:25,0:25:881:0:0:0,-7.52575,-79.605	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.213	0/1:20:17,3:17:612:3:108:-4.00813,0,-49.3928	0/1:18:11,7:11:392:7:252:-17.6104,0,-30.2015	0/0:345:345,0:345:12355:0:0:0,-103.855,-1111.67	0/1:362:209,153:209:7492:153:5444:-381.075,0,-565.272	0/1:126:62,64:62:2228:64:2280:-167.507,0,-162.846	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:214:214,0:214:7646:0:0:0,-64.4204,-688.131	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.415	0/0:205:205,0:205:7356:0:0:0,-61.7111,-662.072	0/0:129:129,0:129:4629:0:0:0,-38.8329,-416.662	0/1:123:54,69:54:1944:69:2458:-184.437,0,-138.207	0/0:171:171,0:171:6148:0:0:0,-51.4761,-553.299	0/1:163:73,90:73:2593:90:3228:-241.451,0,-184.509	0/0:296:295,0:295:10592:0:0:0,-88.8038,-952.714	0/0:160:160,0:160:5748:0:0:0,-48.1648,-517.409	0/0:207:207,0:207:7419:0:0:0,-62.3132,-667.741	0/0:299:298,0:298:10665:0:0:0,-89.7069,-958.979	0/1:24:9,15:9:324:15:540:-41.7118,0,-22.2811	0/0:187:187,0:187:6696:0:0:0,-56.2926,-602.647	0/0:74:74,0:74:2652:0:0:0,-22.2762,-238.924	0/0:24:24,0:24:864:0:0:0,-7.22472,-77.8921	0/1:230:131,99:131:4704:99:3540:-249.538,0,-353.864	0/1:77:34,43:34:1196:43:1540:-115.623,0,-84.7574	0/1:35:31,4:31:1116:4:144:-2.77757,0,-90.212	0/1:21:10,11:10:360:11:396:-29.6588,0,-26.4227	0/0:130:130,0:130:4663:0:0:0,-39.1339,-419.808	0/1:130:64,66:64:2296:66:2372:-174.412,0,-167.765	0/0:14:14,0:14:489:0:0:0,-4.21442,-44.3389	0/0:325:325,0:325:11635:0:0:0,-97.8347,-1046.71	0/1:306:155,151:155:5560:151:5395:-393.507,0,-408.393	0/0:96:94,2:94:3372:2:72:0,-22.0622,-296.72	0/0:184:183,1:183:6568:1:36:0,-51.7938,-587.589	0/1:369:184,184:184:6592:184:6567:-479.838,0,-482.203	0/0:215:212,3:212:7589:3:108:0,-54.6463,-672.633	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.478	0/0:94:94,0:94:3380:0:0:0,-28.2968,-304.162	0/1:112:51,61:51:1828:61:2188:-163.468,0,-131.071	0/0:23:23,0:23:820:0:0:0,-6.92369,-73.7345	0/0:177:177,0:177:6340:0:0:0,-53.2823,-570.63	0/1:99:45,54:45:1616:54:1928:-143.978,0,-115.906	0/0:311:311,0:311:11125:0:0:0,-93.6203,-1000.85	0/0:338:338,0:338:12151:0:0:0,-101.748,-1093.32	0/0:150:150,0:150:5379:0:0:0,-45.1545,-484.089	0/0:143:143,0:143:5109:0:0:0,-43.0473,-459.906	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7595	0/0:210:210,0:210:7504:0:0:0,-63.2163,-675.058	0/1:203:91,112:91:3256:112:3999:-298.918,0,-232.152	0/1:313:163,150:163:5852:150:5337:-385.296,0,-431.753	0/0:115:115,0:115:4136:0:0:0,-34.6184,-372.412	0/0:77:77,0:77:2772:0:0:0,-23.1793,-249.711	0/1:121:66,55:66:2353:55:1972:-141.328,0,-175.592	0/1:227:119,108:119:4259:108:3863:-279.326,0,-314.523	0/1:77:45,32:45:1616:32:1152:-80.7726,0,-122.539	0/0:133:133,0:133:4784:0:0:0,-40.037,-430.605	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.199	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.725	0/1:111:40,70:40:1427:70:2507:-192.359,0,-95.2422	0/1:100:27,73:27:964:73:2628:-206.656,0,-56.9738	0/0:208:208,0:208:7454:0:0:0,-62.6142,-670.459	0/0:159:159,0:159:5707:0:0:0,-47.8638,-513.627
chr02	3136891	.	G	A	309676	PASS	AB=0.5019;ABP=3.55479;AC=110;AF=0.585106;AN=188;AO=12117;CIGAR=1X;DP=22045;DPB=22045;DPRA=33.8525;EPP=26306.1;EPPR=21515.8;GTI=37;LEN=1;MEANALT=1.17204;MQM=53.843;MQMR=23.0534;NS=94;NUMALT=1;ODDS=2.62791;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=432180;QR=351164;RO=9911;RPL=6139;RPP=7.65557;RPPR=9302.64;RPR=5978;RUN=1;SAF=6140;SAP=7.7717;SAR=5977;SRF=1699;SRP=9296.93;SRR=8212;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:142:68,74:68:2420:74:2652:-192.923,0,-25.812	1/1:320:78,242:78:2756:242:8606:-680.709,-9.89413,0	0/1:416:138,278:138:4921:278:9904:-760.429,0,-13.7885	0/1:421:280,141:280:9940:141:5040:-325.329,0,-410.549	0/1:175:102,72:102:3622:72:2584:-179.431,0,-172.016	0/1:130:69,61:69:2455:61:2169:-155.266,0,-117.599	1/1:310:74,236:74:2591:236:8423:-685.16,-23.1638,0	1/1:310:91,219:91:3237:219:7836:-608.173,-0.928082,0	0/1:277:110,167:110:3909:167:5957:-447.428,0,-26.4876	1/1:204:52,151:52:1836:151:5397:-434.49,-11.5172,0	0/1:219:85,134:85:3009:134:4769:-362.515,0,-10.7528	0/1:290:112,178:112:3978:178:6329:-478.559,0,-24.7489	0/1:260:95,164:95:3360:164:5851:-445.773,0,-15.3899	0/1:219:142,77:142:5042:77:2730:-179.067,0,-254.23	0/1:240:158,82:158:5635:82:2929:-191.06,0,-240.248	0/1:227:146,81:146:5146:81:2882:-190.461,0,-243.978	1/1:183:43,140:43:1520:140:4972:-399.904,-12.5906,0	0/1:173:98,75:98:3478:75:2675:-187.346,0,-170.349	1/1:204:50,154:50:1767:154:5504:-441.656,-11.7858,0	0/1:489:306,183:306:10783:183:6529:-435.871,0,-457.935	0/1:416:282,134:282:9976:134:4780:-301.402,0,-447.345	0/1:144:58,86:58:2054:86:3063:-232.117,0,-11.3055	0/1:253:92,161:92:3269:161:5736:-438.978,0,-11.7572	0/1:239:159,80:159:5653:80:2872:-185.885,0,-278.163	0/1:185:79,106:79:2823:106:3796:-284.765,0,-22.526	1/1:523:140,383:140:4946:383:13680:-1095.5,-26.6696,0	0/1:446:245,200:245:8706:200:7113:-503.023,0,-109.858	0/1:123:42,81:42:1508:81:2899:-223.023,0,-4.25381	0/1:484:184,300:184:6516:300:10708:-816.346,0,-20.0584	0/1:206:61,145:61:2170:145:5159:-400.683,0,-0.20287	0/1:275:184,90:184:6499:90:3212:-205.661,0,-314.369	0/1:17:8,9:8:288:9:320:-23.9962,0,-2.90327	0/1:52:28,24:28:999:24:851:-60.9393,0,-12.1367	1/1:12:1,11:1:36:11:392:-34.0907,-2.51362,0	0/1:28:20,8:20:701:8:288:-17.8386,0,-28.3764	0/0:40:37,3:37:1290:3:108:0,-2.05891,-53.2824	0/1:573:188,385:188:6636:385:13744:-1062.39,0,-4.28267	0/1:177:111,66:111:3957:66:2364:-158.699,0,-227.572	0/1:184:115,69:115:4079:69:2468:-165.494,0,-201.161	0/0:7:7,0:7:248:0:0:0,-2.10721,-18.0771	0/1:349:109,240:109:3869:240:8595:-664.453,0,-5.23044	0/1:161:61,100:61:2169:100:3551:-269.875,0,-15.0329	1/1:343:84,259:84:3007:259:9213:-739.592,-18.6935,0	1/1:265:76,189:76:2653:189:6750:-537.255,-10.7275,0	0/1:233:152,81:152:5343:81:2896:-190.02,0,-227.728	0/1:223:79,144:79:2800:144:5149:-395.493,0,-4.22396	0/1:195:126,69:126:4493:69:2450:-158.276,0,-201.628	0/1:307:102,205:102:3602:205:7320:-565.023,0,-8.11533	1/1:210:67,142:67:2385:142:5080:-395.201,-2.06157,0	1/1:240:65,175:65:2299:175:6259:-500.808,-13.6558,0	0/1:302:99,203:99:3510:203:7233:-558.098,0,-2.02023	0/1:28:17,11:17:584:11:392:-27.138,0,-11.6269	1/1:376:106,270:106:3748:270:9630:-753.722,-5.66513,0	0/1:99:51,47:51:1784:47:1675:-120.815,0,-16.4128	0/1:25:11,14:11:372:14:492:-36.6765,0,-5.87352	0/1:307:210,97:210:7388:97:3474:-218.326,0,-380.27	0/1:136:97,39:97:3439:39:1400:-84.7225,0,-128.029	0/1:21:19,2:19:662:2:72:-0.506499,0,-29.6705	0/1:35:19,16:19:671:16:576:-41.5476,0,-34.0499	0/1:190:71,119:71:2480:119:4235:-323.094,0,-13.4305	0/1:270:179,91:179:6331:91:3218:-207.619,0,-301.379	0/1:14:5,9:5:180:9:324:-25.2359,0,-0.381069	1/1:221:58,162:58:2059:162:5789:-467.065,-13.8392,0	0/1:342:230,112:230:8201:112:4003:-256.394,0,-385.901	0/1:146:56,90:56:1991:90:3209:-243.736,0,-20.2621	1/1:183:46,137:46:1639:137:4924:-396.508,-10.6672,0	0/1:351:231,119:231:8215:119:4237:-274.952,0,-391.675	0/1:251:84,167:84:2980:167:5983:-461.482,0,-0.380239	0/1:146:52,94:52:1847:94:3341:-255.998,0,-7.20598	0/1:214:74,139:74:2594:139:4974:-379.721,0,-8.99748	0/1:202:122,80:122:4350:80:2852:-195.718,0,-240.654	0/1:66:27,39:27:956:39:1396:-105.687,0,-6.8517	0/1:184:60,123:60:2136:123:4382:-336.241,0,-3.84662	0/1:221:166,55:166:5886:55:1959:-106.61,0,-286.555	0/1:476:190,286:190:6721:286:10201:-769.649,0,-44.3991	0/1:327:119,208:119:4205:208:7416:-567.199,0,-9.21289	1/1:241:62,177:62:2168:177:6308:-501.651,-10.3663,0	1/1:237:66,171:66:2348:171:6095:-473.31,-1.03267,0	0/1:37:12,25:12:428:25:896:-69.3538,0,-0.836402	0/1:269:85,184:85:3007:184:6563:-507.307,0,-3.21323	0/1:336:238,97:238:8503:97:3476:-209.818,0,-405.317	0/1:505:326,178:326:11605:178:6359:-419.316,0,-524.6	1/1:244:67,177:67:2383:177:6272:-500.402,-10.6019,0	0/1:245:98,146:98:3457:146:5183:-390.595,0,-15.5121	0/1:251:134,117:134:4744:117:4141:-296.513,0,-238.574	0/1:421:275,146:275:9735:146:5201:-340.087,0,-428.82	0/1:108:51,57:51:1811:57:2032:-149.534,0,-80.122	0/1:255:81,174:81:2859:174:6213:-477.339,0,-3.47728	0/1:242:80,162:80:2830:162:5752:-441.016,0,-10.3485	0/1:194:63,131:63:2203:131:4677:-358.678,0,-5.54298	0/1:301:188,113:188:6677:113:3993:-267.239,0,-276.957	0/1:245:199,45:199:7044:45:1612:-71.2348,0,-385.935	0/1:268:102,166:102:3610:166:5928:-449.57,0,-12.0507	0/1:394:126,268:126:4444:268:9538:-737.533,0,-0.64313
chr02	3544569	.	ATATT	GTATA,ATATA	340109	PASS	AB=0.508466,0.487905;ABP=5.58413,8.26302;AC=154,34;AF=0.819149,0.180851;AN=188;AO=10319,2038;CIGAR=1X3M1X,4M1X;DP=12392;DPB=12393;DPRA=0,1.05638;EPP=22410.4,4428.47;EPPR=7.35324;GTI=0;LEN=5,1;MEANALT=1.80851,2.34091;MQM=51.0089,59.7365;MQMR=53;NS=94;NUMALT=2;ODDS=1.62433;PAIRED=0,0;PAIREDR=0;PAO=5,0;PQA=180,0;PQR=0;PRO=0;QA=364916,72953;QR=45;RO=2;RPL=4516,880;RPP=351.567,85.3558;RPPR=7.35324;RPR=5803,1158;RUN=1,1;SAF=4516,880;SAP=351.567,85.3558;SAR=5803,1158;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:100:0,100,0:0:0:100,0:3528,0:-314.815,-30.103,0,-314.815,-30.103,-314.815	1/1:238:0,236,0:0:0:236,0:8398,0:-750.328,-71.0431,0,-750.328,-71.0431,-750.328	1/1:177:0,176,0:0:0:176,0:6202,0:-554.376,-52.9813,0,-554.376,-52.9813,-554.376	1/2:209:0,98,111:0:0:98,111:3438,3954:-600.725,-322.547,-293.046,-278.53,0,-245.116	1/2:105:0,46,59:0:0:46,59:1613,2124:-303.963,-173.658,-159.811,-130.658,0,-112.897	1/2:50:0,23,27:0:0:23,27:822,972:-145.914,-79.6443,-72.7206,-66.6263,0,-58.4985	1/1:161:0,160,0:0:0:160,0:5625,0:-500.3,-48.1648,0,-500.3,-48.1648,-500.3	1/1:258:0,257,1:0:0:257,1:9081,36:-810.237,-77.3647,0,-807.299,-74.0675,-806.998	1/1:178:0,177,1:0:0:177,1:6247,36:-558.36,-53.2823,0,-555.423,-49.9851,-555.122	1/1:126:0,126,0:0:0:126,0:4432,0:-397.211,-37.9298,0,-397.211,-37.9298,-397.211	1/1:95:0,94,0:0:0:94,0:3288,0:-292.944,-28.2968,0,-292.944,-28.2968,-292.944	1/1:169:0,169,0:0:0:169,0:5975,0:-532.49,-50.8741,0,-532.49,-50.8741,-532.49	1/1:135:0,135,0:0:0:135,0:4750,0:-424.519,-40.6391,0,-424.519,-40.6391,-424.519	1/2:93:0,58,35:0:0:58,35:2047,1256:-268.433,-102.809,-85.3495,-165.98,0,-155.443	1/2:122:0,64,57:0:0:64,57:2284,2043:-351.126,-166.618,-147.352,-184.504,0,-167.345	1/2:81:0,39,42:0:0:39,42:1382,1497:-234.189,-122.322,-110.581,-112.221,0,-99.5778	1/1:82:0,82,0:0:0:82,0:2919,0:-259.341,-24.6845,0,-259.341,-24.6845,-259.341	1/2:86:0,49,35:0:0:49,35:1732,1252:-242.221,-102.08,-87.3296,-140.163,0,-129.627	1/1:52:0,52,0:0:0:52,0:1831,0:-163.569,-15.6536,0,-163.569,-15.6536,-163.569	1/2:241:0,106,134:0:0:106,134:3751,4796:-694.958,-391.104,-359.195,-303.858,0,-263.52	1/2:225:0,117,108:0:0:117,108:4125,3880:-648.942,-315.261,-280.04,-334.035,0,-301.524	1/1:68:0,68,0:0:0:68,0:2391,0:-213.962,-20.47,0,-213.962,-20.47,-213.962	1/1:153:0,151,2:0:0:151,2:5360,72:-478.937,-45.4555,0,-473.062,-39.2209,-472.46	1/2:119:0,63,56:0:0:63,56:2232,1997:-343.827,-163.144,-144.179,-181.038,0,-164.18	1/1:103:0,102,0:0:0:102,0:3605,0:-321.666,-30.7051,0,-321.666,-30.7051,-321.666	1/1:314:0,312,0:0:0:312,0:10962,0:-980.065,-93.9214,0,-980.065,-93.9214,-980.065	1/1:325:0,323,2:0:0:323,2:11393,72:-1017.85,-97.2327,0,-1011.97,-90.998,-1011.37	1/1:69:0,67,0:0:0:67,0:2387,0:-212.723,-20.169,0,-212.723,-20.169,-212.723	1/1:270:0,269,1:0:0:269,1:9578,36:-857.217,-80.9771,0,-854.28,-77.6798,-853.978	1/1:145:0,145,0:0:0:145,0:5142,0:-461.133,-43.6494,0,-461.133,-43.6494,-461.133	1/2:194:0,93,100:0:0:93,100:3290,3554:-555.408,-289.657,-261.661,-265.803,0,-235.7	1/1:10:0,10,0:0:0:10,0:360,0:-32.5542,-3.0103,0,-32.5542,-3.0103,-32.5542	1/1:24:0,21,2:0:0:21,2:753,72:-67.3358,-6.32163,0,-61.4606,-0.429987,-60.8585	1/1:15:0,15,0:0:0:15,0:526,0:-47.478,-4.51545,0,-47.478,-4.51545,-47.478	1/2:6:0,4,2:0:0:4,2:139,72:-17.4804,-6.23466,-5.03054,-11.601,0,-10.9989	1/2:17:0,4,13:0:0:4,13:144,468:-50.2347,-38.5463,-37.3421,-12.047,0,-8.1336	1/1:277:0,277,0:0:0:277,0:9845,0:-878.303,-83.3853,0,-878.303,-83.3853,-878.303	1/1:124:0,124,0:0:0:124,0:4387,0:-392.176,-37.3277,0,-392.176,-37.3277,-392.176	1/2:92:0,46,46:0:0:46,46:1629,1640:-265.715,-134.041,-120.194,-132.028,0,-118.181	1/2:5:0,2,3:0:0:2,3:66,104:-13.9113,-8.79971,-8.19765,-5.44104,0,-4.53795	1/1:198:0,198,0:0:0:198,0:6989,0:-626.101,-59.6039,0,-626.101,-59.6039,-626.101	1/1:65:0,65,0:0:0:65,0:2297,0:-205.812,-19.567,0,-205.812,-19.567,-205.812	1/1:219:0,219,0:0:0:219,0:7740,0:-692.151,-65.9256,0,-692.151,-65.9256,-692.151	1/1:145:0,145,0:0:0:145,0:5122,0:-457.815,-43.6494,0,-457.815,-43.6494,-457.815	1/2:85:0,46,38:0:0:46,38:1614,1364:-241.751,-111.262,-97.4144,-130.484,0,-119.045	1/1:115:0,115,0:0:0:115,0:4074,0:-364.282,-34.6185,0,-364.282,-34.6185,-364.282	1/2:178:1,94,83:1:22:94,83:3267,2984:-505.277,-241.045,-214.424,-262.918,0,-239.609	1/1:211:0,209,0:0:0:209,0:7403,0:-662.589,-62.9153,0,-662.589,-62.9153,-662.589	1/1:116:0,115,0:0:0:115,0:4052,0:-362.902,-34.6185,0,-362.902,-34.6185,-362.902	1/1:178:0,175,2:0:0:175,2:6231,72:-556.675,-52.6803,0,-550.8,-46.7821,-550.198	1/1:107:0,106,0:0:0:106,0:3743,0:-335.029,-31.9092,0,-335.029,-31.9092,-335.029	1/2:17:0,11,6:0:0:11,6:390,216:-49.5731,-17.9843,-14.673,-31.946,0,-30.1399	1/1:186:0,186,0:0:0:186,0:6616,0:-591.774,-55.9916,0,-591.774,-55.9916,-591.774	1/1:58:0,58,0:0:0:58,0:2056,0:-184.363,-17.4597,0,-184.363,-17.4597,-184.363	1/1:13:0,13,0:0:0:13,0:441,0:-39.9089,-3.91339,0,-39.9089,-3.91339,-39.9089	1/2:169:0,104,64:0:0:104,64:3647,2300:-483.085,-187.706,-156.399,-295.445,0,-27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chr02	4265238	.	G	A	361555	PASS	AB=0.504711;ABP=5.87481;AC=135;AF=0.718085;AN=188;AO=14043;CIGAR=1X;DP=21428;DPB=21428;DPRA=0;EPP=30488.3;EPPR=16019.8;GTI=3;LEN=1;MEANALT=1.05319;MQM=59.6835;MQMR=55.8092;NS=94;NUMALT=1;ODDS=2.72114;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=502572;QR=263431;RO=7380;RPL=8107;RPP=731.82;RPPR=5.72199;RPR=5936;RUN=1;SAF=8106;SAP=730.478;SAR=5937;SRF=3641;SRP=5.83616;SRR=3739;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:186:85,101:85:3052:101:3603:-268.461,0,-217.968	1/1:254:0,254:0:0:254:9067:-815.396,-76.4616,0	0/1:545:277,268:277:9923:268:9619:-701.508,0,-713.704	1/1:182:0,182:0:0:182:6495:-584.131,-54.7875,0	0/1:235:166,69:166:5946:69:2480:-152.702,0,-457.267	0/1:146:93,53:93:3329:53:1894:-126.747,0,-249.875	1/1:145:2,143:2:72:143:5127:-454.865,-36.9942,0	0/1:558:308,250:308:10954:250:8943:-636.532,0,-797.123	1/1:196:0,196:0:0:196:6998:-629.838,-59.0019,0	1/1:176:2,174:2:63:174:6211:-552.802,-47.0889,0	1/1:116:0,116:0:0:116:4164:-374.83,-34.9195,0	0/1:289:82,207:82:2927:207:7405:-579.112,0,-176.667	1/1:188:1,187:1:32:187:6660:-596.184,-53.3943,0	1/1:61:1,60:1:36:60:2156:-190.687,-14.7646,0	1/1:79:0,79:0:0:79:2832:-254.928,-23.7814,0	0/1:131:53,78:53:1883:78:2776:-210.626,0,-130.313	1/1:129:0,129:0:0:129:4607:-414.528,-38.8329,0	1/1:55:1,54:1:36:54:1936:-170.902,-12.9584,0	1/1:74:0,74:0:0:74:2656:-239.196,-22.2762,0	0/1:569:372,197:372:13289:197:7076:-465.51,0,-1016.7	0/1:300:142,158:142:5049:158:5634:-416.859,0,-355.073	0/1:195:77,118:77:2764:118:4247:-323.701,0,-188.54	1/1:139:0,139:0:0:139:4981:-448.361,-41.8432,0	1/1:59:2,57:2:72:57:2044:-177.532,-11.0606,0	0/1:273:95,177:95:3393:177:6353:-489.606,0,-223.484	0/1:969:506,462:506:18105:462:16592:-1200.65,0,-1328.61	1/1:402:0,402:0:0:402:14388:-1294.43,-121.014,0	1/1:71:0,71:0:0:71:2536:-228.353,-21.3731,0	0/1:874:432,442:432:15416:442:15815:-1159.37,0,-1119.44	0/1:379:187,191:187:6657:191:6857:-502.734,0,-478.675	1/1:119:4,115:4:144:115:4124:-356.968,-22.509,0	0/1:21:14,6:14:496:6:216:-13.5385,0,-38.7341	0/1:34:17,17:17:612:17:600:-44.0942,0,-45.1784	0/1:12:8,4:8:280:4:144:-9.70126,0,-21.9269	0/1:16:10,6:10:360:6:216:-14.974,0,-27.5444	0/1:23:6,17:6:216:17:612:-48.4897,0,-12.8668	0/1:805:424,381:424:15106:381:13656:-986.264,0,-1107.76	0/1:360:157,203:157:5621:203:7255:-544.371,0,-390.89	1/1:64:0,64:0:0:64:2283:-205.524,-19.2659,0	0/1:13:9,4:9:324:4:144:-9.32876,0,-25.5925	0/1:578:174,404:174:6235:404:14500:-1130.4,0,-387.244	0/1:129:38,91:38:1368:91:3268:-255.497,0,-84.588	1/1:301:0,301:0:0:301:10812:-972.537,-90.61,0	1/1:163:0,163:0:0:163:5833:-524.581,-49.0679,0	0/1:149:73,76:73:2603:76:2711:-199.368,0,-184.945	0/1:386:185,201:185:6568:201:7164:-528.174,0,-472.835	1/1:132:1,131:1:36:131:4682:-418.086,-36.3484,0	1/1:247:0,247:0:0:247:8818:-793.487,-74.3544,0	1/1:178:0,178:0:0:178:6385:-574.657,-53.5833,0	1/1:309:0,309:0:0:309:11050:-993.376,-93.0183,0	0/1:453:227,226:227:8142:226:8072:-589.171,0,-590.876	0/1:14:3,11:3:108:11:396:-31.7683,0,-5.86075	1/1:274:1,273:1:36:273:9788:-876.85,-78.8839,0	1/1:75:0,75:0:0:75:2675:-240.194,-22.5773,0	0/1:18:3,15:3:108:15:536:-43.1563,0,-4.06674	1/1:149:5,144:5:176:144:5129:-445.303,-28.6685,0	1/1:60:3,57:3:108:57:2040:-173.791,-7.98663,0	0/1:9:5,3:5:165:3:108:-7.41198,0,-12.4701	0/1:31:15,16:15:540:16:576:-42.8431,0,-39.5483	0/1:227:92,135:92:3285:135:4812:-364.886,0,-227.535	0/1:284:173,111:173:6159:111:3954:-270.546,0,-464.342	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:273:0,273:0:0:273:9780:-880.119,-82.1812,0	0/1:266:124,142:124:4432:142:5073:-376.161,0,-311.662	0/1:122:12,110:12:432:110:3925:-316.638,0,-2.36493	0/1:356:197,159:197:7051:159:5687:-404.691,0,-522.539	0/1:502:289,213:289:10323:213:7603:-533.054,0,-767.695	0/1:490:269,221:269:9581:221:7883:-561.981,0,-710.737	0/1:117:65,52:65:2319:52:1864:-132.819,0,-171.647	0/1:188:40,148:40:1440:148:5303:-420.759,0,-66.5819	0/1:215:142,73:142:5096:73:2616:-170.935,0,-389.948	0/1:68:20,48:20:712:48:1720:-134.481,0,-43.9366	0/1:261:126,135:126:4460:135:4803:-353.851,0,-317.239	0/1:263:157,106:157:5601:106:3780:-261.174,0,-418.872	0/1:513:275,238:275:9794:238:8512:-611.029,0,-714.147	1/1:337:1,336:1:36:336:12024:-1078.38,-97.8488,0	0/1:490:247,243:247:8816:243:8696:-634.918,0,-636.483	0/1:496:252,244:252:8969:244:8748:-637.944,0,-644.908	0/1:37:14,23:14:504:23:828:-63.706,0,-34.3689	1/1:271:1,270:1:36:270:9685:-867.178,-77.9809,0	1/1:120:0,120:0:0:120:4312:-387.976,-36.1236,0	1/1:212:0,212:0:0:212:7601:-684.009,-63.8184,0	0/1:251:75,176:75:2668:176:6304:-491.63,0,-164.806	1/1:161:0,161:0:0:161:5759:-518.42,-48.4658,0	1/1:90:0,90:0:0:90:3228:-290.714,-27.0927,0	0/1:293:142,151:142:5049:151:5384:-396.452,0,-366.352	1/1:40:1,39:1:32:39:1396:-122.731,-8.84189,0	0/1:265:68,197:68:2436:197:7021:-552.093,0,-139.722	1/1:138:0,138:0:0:138:4960:-446.514,-41.5421,0	1/1:62:0,62:0:0:62:2219:-199.813,-18.6639,0	0/1:229:148,81:148:5270:81:2900:-192.295,0,-402.477	0/1:225:184,41:184:6580:41:1459:-63.7674,0,-520.151	1/1:223:0,223:0:0:223:7986:-718.622,-67.1297,0	1/1:241:0,241:0:0:241:8622:-775.947,-72.5482,0
chr02	4265586	.	CACTG	GACTG,GACTC	133648	PASS	AB=0.479915,0.514271;ABP=9.63949,6.35703;AC=153,35;AF=0.81383,0.18617;AN=188;AO=5047,992;CIGAR=1X4M,1X3M1X;DP=6081;DPB=6081;DPRA=0,0.976543;EPP=10893.1,2139.77;EPPR=9.52472;GTI=3;LEN=1,5;MEANALT=1.79787,2.30769;MQM=59.9469,59.5323;MQMR=60;NS=94;NUMALT=2;ODDS=3.62767;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=180450,35013;QR=108;RO=3;RPL=5040,990;RPP=10901.7,2139.77;RPPR=9.52472;RPR=7,2;RUN=1,1;SAF=1,0;SAP=10953.7,2157.11;SAR=5046,992;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:52:0,52,0:0:0:52,0:1864,0:-168.039,-15.6536,0,-168.039,-15.6536,-168.039	1/1:51:0,51,0:0:0:51,0:1812,0:-163.36,-15.3525,0,-163.36,-15.3525,-163.36	1/1:129:0,128,0:0:0:128,0:4543,0:-408.675,-38.5318,0,-408.675,-38.5318,-408.675	1/2:159:0,53,106:0:0:53,106:1896,3698:-455.688,-301.081,-285.126,-154.962,0,-123.052	1/2:57:0,25,32:0:0:25,32:881,1142:-165.178,-93.4517,-85.9259,-72.0801,0,-62.4472	1/2:42:0,25,17:0:0:25,17:888,605:-122.022,-49.6638,-42.1381,-72.7133,0,-67.5958	1/1:72:0,72,0:0:0:72,0:2573,0:-231.818,-21.6742,0,-231.818,-21.6742,-231.818	1/1:87:0,84,0:0:0:84,0:2996,0:-269.53,-25.2865,0,-269.53,-25.2865,-269.53	1/1:49:0,48,0:0:0:48,0:1701,0:-153.112,-14.4494,0,-153.112,-14.4494,-153.112	1/1:47:0,47,0:0:0:47,0:1688,0:-152.207,-14.1484,0,-152.207,-14.1484,-152.207	1/1:18:0,18,0:0:0:18,0:633,0:-57.2951,-5.41854,0,-57.2951,-5.41854,-57.2951	1/1:61:0,59,1:0:0:59,1:2118,36:-190.549,-17.7608,0,-187.62,-14.8114,-187.319	1/1:37:0,37,0:0:0:37,0:1323,0:-119.371,-11.1381,0,-119.371,-11.1381,-119.371	1/2:22:0,7,15:0:0:7,15:252,535:-64.5318,-43.9688,-41.8616,-20.9217,0,-16.4063	1/2:30:0,16,14:0:0:16,14:572,498:-87.5788,-40.9382,-36.1217,-46.9969,0,-42.7825	1/2:41:0,22,18:0:0:22,18:792,647:-117.402,-52.7833,-46.1606,-64.6186,0,-59.2	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/2:12:0,6,6:0:0:6,6:216,210:-35.0652,-17.4357,-15.6296,-17.9843,0,-16.1782	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/2:153:0,92,61:0:0:92,61:3304,2157:-445.554,-176.026,-148.332,-269.883,0,-251.52	1/2:136:0,59,76:0:0:59,76:2116,2640:-387.162,-214.568,-196.807,-172.588,0,-149.71	1/1:69:0,68,0:0:0:68,0:2420,0:-217.467,-20.47,0,-217.467,-20.47,-217.467	1/1:143:0,141,2:0:0:141,2:5045,71:-453.838,-42.4452,0,-448.053,-36.3052,-447.451	1/2:60:0,25,35:0:0:25,35:896,1241:-174.532,-101.459,-93.9331,-73.43,0,-62.8939	1/1:57:0,56,0:0:0:56,0:1991,0:-179.21,-16.8577,0,-179.21,-16.8577,-179.21	1/1:229:1,224,0:1:36:224,0:8014,0:-717.626,-64.4933,0,-717.927,-67.4307,-720.864	1/1:143:0,143,0:0:0:143,0:5105,0:-459.543,-43.0473,0,-459.543,-43.0473,-459.543	1/1:14:0,14,0:0:0:14,0:504,0:-45.6981,-4.21442,0,-45.6981,-4.21442,-45.6981	1/1:278:1,276,1:1:36:276,1:9846,36:-882.483,-80.1469,0,-879.847,-80.1469,-882.483	1/1:87:0,85,0:0:0:85,0:3025,0:-272.12,-25.5876,0,-272.12,-25.5876,-272.12	1/2:87:0,52,35:0:0:52,35:1864,1247:-254.024,-101.995,-86.3411,-152.386,0,-141.85	1/1:18:0,18,0:0:0:18,0:630,0:-57.0246,-5.41854,0,-57.0246,-5.41854,-57.0246	1/1:37:0,37,0:0:0:37,0:1328,0:-119.821,-11.1381,0,-119.821,-11.1381,-119.821	1/1:5:0,4,0:0:0:4,0:144,0:-12.9538,-1.20412,0,-12.9538,-1.20412,-12.9538	1/2:9:0,8,1:0:0:8,1:288,36:-26.7883,-3.2882,-0.879958,-23.8592,0,-23.5581	2/2:13:0,1,12:0:0:1,12:36,422:-37.9563,-35.0183,-34.7173,-3.61236,-0.315115,0	1/1:108:0,107,0:0:0:107,0:3836,0:-344.806,-32.2102,0,-344.806,-32.2102,-344.806	1/1:97:0,96,0:0:0:96,0:3440,0:-309.448,-28.8989,0,-309.448,-28.8989,-309.448	1/2:26:0,14,12:0:0:14,12:495,430:-75.7159,-35.4031,-31.1887,-40.6686,0,-37.0563	1/2:5:0,2,3:0:0:2,3:72,101:-14.4046,-8.52044,-7.91838,-6.23466,0,-5.33157	1/1:82:1,80,0:1:36:80,0:2861,0:-254.154,-21.1199,0,-254.455,-24.0824,-257.392	1/1:18:0,18,0:0:0:18,0:644,0:-58.2906,-5.41854,0,-58.2906,-5.41854,-58.2906	1/1:90:0,90,0:0:0:90,0:3216,0:-289.663,-27.0927,0,-289.663,-27.0927,-289.663	1/1:19:0,19,0:0:0:19,0:684,0:-61.8903,-5.71957,0,-61.8903,-5.71957,-61.8903	1/2:20:0,5,15:0:0:5,15:180,519:-57.2114,-42.5208,-41.0157,-15.0469,0,-10.5315	1/1:132:0,132,0:0:0:132,0:4717,0:-424.66,-39.736,0,-424.66,-39.736,-424.66	1/2:55:0,16,39:0:0:16,39:576,1371:-158.888,-111.895,-107.078,-47.3503,0,-35.6101	1/1:98:0,98,0:0:0:98,0:3492,0:-314.49,-29.5009,0,-314.49,-29.5009,-314.49	1/1:49:0,49,0:0:0:49,0:1747,0:-157.514,-14.7505,0,-157.514,-14.7505,-157.514	1/1:33:0,33,0:0:0:33,0:1174,0:-105.967,-9.93399,0,-105.967,-9.93399,-105.967	1/1:143:0,143,0:0:0:143,0:5121,0:-461.029,-43.0473,0,-461.029,-43.0473,-461.029	1/2:12:0,4,8:0:0:4,8:144,274:-34.3378,-22.5823,-21.3782,-12.1095,0,-9.70126	1/1:63:0,63,0:0:0:63,0:2255,0:-203.212,-18.9649,0,-203.212,-18.9649,-203.212	1/1:27:0,27,0:0:0:27,0:964,0:-87.0768,-8.12781,0,-87.0768,-8.12781,-87.0768	1/1:12:0,12,0:0:0:12,0:428,0:-38.8588,-3.61236,0,-38.8588,-3.61236,-38.8588	1/2:72:0,36,35:0:0:36,35:1288,1233:-205.268,-100.237,-89.3996,-105.027,0,-94.4907	1/2:35:0,20,14:0:0:20,14:712,503:-99.1059,-41.0756,-35.055,-58.0742,0,-53.8598	1/2:15:0,13,2:0:0:13,2:460,72:-43.697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chr02	4405092	.	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chr02	5264399	.	A	T	145997	PASS	AB=0.504117;ABP=3.33215;AC=158;AF=0.840426;AN=188;AO=6551;CIGAR=1X;DP=7649;DPB=7649;DPRA=0;EPP=13694.9;EPPR=2303.24;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.6179;MQMR=59.7644;NS=94;NUMALT=1;ODDS=1.31473;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=232775;QR=39097;RO=1095;RPL=6489;RPP=13694.9;RPPR=2303.24;RPR=62;RUN=1;SAF=0;SAP=14228.3;SAR=6551;SRF=0;SRP=2380.77;SRR=1095;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:39:0,39:0:0:39:1400:-125.108,-11.7402,0	1/1:79:0,79:0:0:79:2813:-253.405,-23.7814,0	1/1:125:0,125:0:0:125:4476:-402.988,-37.6288,0	1/1:185:0,184:0:0:184:6563:-589.761,-55.3895,0	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.5584	0/1:41:14,27:14:496:27:972:-75.2653,0,-32.632	1/1:112:0,112:0:0:112:4012:-360.484,-33.7154,0	1/1:155:0,155:0:0:155:5548:-499.444,-46.6597,0	1/1:90:0,90:0:0:90:3188:-286.87,-27.0927,0	1/1:127:0,127:0:0:127:4505:-404.973,-38.2308,0	1/1:56:0,56:0:0:56:1980:-178.341,-16.8577,0	1/1:54:0,54:0:0:54:1922:-173.233,-16.2556,0	1/1:53:0,53:0:0:53:1890:-170.366,-15.9546,0	0/1:69:32,37:32:1144:37:1313:-97.6991,0,-82.4903	0/1:48:21,27:21:756:27:953:-70.8988,0,-53.8479	0/1:48:24,24:24:855:24:838:-61.1507,0,-62.8207	1/1:34:0,34:0:0:34:1208:-108.99,-10.235,0	0/1:22:12,10:12:423:10:360:-26.1216,0,-31.4626	1/1:18:0,18:0:0:18:629:-56.8771,-5.41854,0	0/1:261:121,140:121:4348:140:4902:-362.303,0,-312.212	0/1:156:74,82:74:2647:82:2921:-216.154,0,-190.732	1/1:56:0,56:0:0:56:2004:-180.633,-16.8577,0	1/1:69:0,69:0:0:69:2392:-215.457,-20.7711,0	0/1:52:21,31:21:739:31:1104:-84.0171,0,-51.1788	1/1:62:0,62:0:0:62:2179:-196.055,-18.6639,0	1/1:264:1,263:1:32:263:9366:-839.608,-76.2726,0	1/1:249:0,249:0:0:249:8835:-795.129,-74.9565,0	1/1:24:0,24:0:0:24:839:-75.8216,-7.22472,0	1/1:267:0,267:0:0:267:9526:-857.297,-80.375,0	1/1:155:0,155:0:0:155:5545:-499.039,-46.6597,0	0/1:66:34,32:34:1216:32:1118:-81.0487,0,-89.8786	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:25:0,25:0:0:25:885:-79.7759,-7.52575,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:11:0,11:0:0:11:387:-35.1659,-3.31133,0	0/1:22:8,14:8:288:14:504:-39.0754,0,-19.6447	1/1:124:0,124:0:0:124:4420:-397.468,-37.3277,0	1/1:90:0,90:0:0:90:3212:-289.169,-27.0927,0	0/1:40:17,23:17:612:23:828:-62.802,0,-43.3722	0/1:7:2,5:2:68:5:180:-14.4449,0,-4.3505	1/1:151:0,151:0:0:151:5376:-483.257,-45.4555,0	1/1:26:0,26:0:0:26:914:-82.5744,-7.82678,0	1/1:105:0,105:0:0:105:3723:-335.266,-31.6082,0	1/1:39:0,39:0:0:39:1385:-124.948,-11.7402,0	0/1:44:18,26:18:644:26:888:-66.8959,0,-45.0453	1/1:67:0,67:0:0:67:2360:-212.657,-20.169,0	0/1:76:44,32:44:1572:32:1118:-78.0473,0,-118.893	1/1:134:0,134:0:0:134:4760:-428.559,-40.338,0	1/1:81:0,81:0:0:81:2882:-259.53,-24.3834,0	1/1:105:0,105:0:0:105:3759:-338.507,-31.6082,0	1/1:110:0,110:0:0:110:3939:-354.699,-33.1133,0	0/1:24:13,11:13:468:11:366:-26.0338,0,-35.2349	1/1:92:2,90:2:72:90:3191:-280.347,-20.858,0	1/1:88:1,87:1:36:87:3097:-275.359,-22.8924,0	1/1:7:0,7:0:0:7:237:-21.6593,-2.10721,0	0/1:161:81,80:81:2896:80:2841:-206.958,0,-212.406	1/1:23:0,23:0:0:23:810:-73.2185,-6.92369,0	0/1:17:12,5:12:413:5:176:-11.0671,0,-32.3803	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	1/1:96:0,96:0:0:96:3419:-307.923,-28.8989,0	0/1:81:44,37:44:1580:37:1332:-95.754,0,-118.103	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:163:0,163:0:0:163:5780:-520.279,-49.0679,0	0/1:172:79,93:79:2814:93:3282:-243.764,0,-201.232	1/1:106:5,101:5:180:101:3608:-308.371,-15.3571,0	1/1:75:0,75:0:0:75:2641:-236.588,-22.5773,0	0/1:132:63,69:63:2229:69:2434:-179.551,0,-161.051	1/1:161:1,160:1:36:160:5679:-507.493,-44.8676,0	1/1:37:0,37:0:0:37:1300:-117.242,-11.1381,0	1/1:63:1,62:1:36:62:2220:-196.466,-15.3666,0	0/1:29:15,14:15:536:14:496:-36.2444,0,-39.8449	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	1/1:72:0,71:0:0:71:2501:-224.704,-21.3731,0	0/1:83:42,41:42:1512:41:1458:-106.158,0,-111.352	1/1:173:0,173:0:0:173:6157:-553.339,-52.0782,0	1/1:111:0,111:0:0:111:3953:-353.409,-33.4143,0	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	1/1:151:0,151:0:0:151:5391:-485.312,-45.4555,0	1/1:20:0,20:0:0:20:692:-62.5917,-6.0206,0	1/1:98:0,98:0:0:98:3485:-313.563,-29.5009,0	0/1:105:59,46:59:2112:46:1652:-117.352,0,-158.741	0/1:229:120,109:120:4267:109:3861:-277.304,0,-315.272	1/1:46:0,46:0:0:46:1648:-147.895,-13.8474,0	1/1:55:0,55:0:0:55:1962:-176.852,-16.5567,0	0/1:36:17,19:17:603:19:680:-50.6921,0,-43.7624	1/1:76:0,76:0:0:76:2677:-240.822,-22.8783,0	0/1:19:9,10:9:324:10:352:-26.2986,0,-23.7863	1/1:53:0,53:0:0:53:1896:-170.902,-15.9546,0	1/1:45:0,45:0:0:45:1608:-145.01,-13.5464,0	1/1:42:0,42:0:0:42:1476:-133.132,-12.6433,0	0/1:55:29,26:29:1031:26:936:-68.0028,0,-76.546	0/1:60:41,19:41:1464:19:665:-42.111,0,-113.908	1/1:112:0,112:0:0:112:3958:-355.158,-33.7154,0	1/1:77:0,76:0:0:76:2709:-243.605,-22.8783,0
chr02	5544270	.	CG	TA,TG	158986	PASS	AB=0.496915,0.501402;ABP=3.15766,3.04075;AC=157,31;AF=0.835106,0.164894;AN=188;AO=6282,909;CIGAR=2X,1X1M;DP=7200;DPB=7200.5;DPRA=11.0492,1.00009;EPP=13644.2,1976.88;EPPR=5.18177;GTI=2;LEN=2,1;MEANALT=1.45161,2.05714;MQM=59.5716,59.8768;MQMR=60;NS=94;NUMALT=2;ODDS=3.96227;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=16,16;PQR=0;PRO=0;QA=223032,32563;QR=36;RO=1;RPL=6282,909;RPP=13644.2,1976.88;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=0,0;SAP=13644.2,1976.88;SAR=6282,909;SRF=0;SRP=5.18177;SRR=1;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:69:0,69,0:0:0:69,0:2427,0:-218.576,-20.7711,0,-218.576,-20.7711,-218.576	1/1:59:0,59,0:0:0:59,0:2070,0:-186.559,-17.7608,0,-186.559,-17.7608,-186.559	1/1:107:0,107,0:0:0:107,0:3788,0:-341.053,-32.2102,0,-341.053,-32.2102,-341.053	1/1:155:0,154,0:0:0:154,0:5458,0:-490.847,-46.3586,0,-490.847,-46.3586,-490.847	1/2:43:0,19,24:0:0:19,24:680,864:-126.303,-70.8578,-65.1383,-55.8036,0,-48.5789	1/2:56:0,27,29:0:0:27,29:950,1044:-162.802,-85.5449,-77.4171,-77.6126,0,-68.8828	1/1:79:0,79,0:0:0:79,0:2779,0:-250.349,-23.7814,0,-250.349,-23.7814,-250.349	1/1:135:0,134,1:0:0:134,1:4736,36:-425.247,-40.338,0,-422.309,-37.0408,-422.008	1/1:116:0,116,0:0:0:116,0:4084,0:-367.696,-34.9195,0,-367.696,-34.9195,-367.696	1/1:84:0,83,0:0:0:83,0:2929,0:-263.481,-24.9855,0,-263.481,-24.9855,-263.481	1/1:14:0,14,0:0:0:14,0:496,0:-44.9739,-4.21442,0,-44.9739,-4.21442,-44.9739	1/1:47:0,47,0:0:0:47,0:1680,0:-151.47,-14.1484,0,-151.47,-14.1484,-151.47	1/1:34:0,34,0:0:0:34,0:1207,0:-108.919,-10.235,0,-108.919,-10.235,-108.919	1/2:10:0,4,6:0:0:4,6:144,212:-29.3709,-17.6186,-16.4145,-12.1095,0,-10.3033	1/2:27:0,11,16:0:0:11,16:396,576:-79.6701,-47.3585,-44.0472,-32.6714,0,-27.8549	1/2:23:0,14,9:0:0:14,9:504,324:-67.9158,-26.7919,-22.5775,-41.4837,0,-38.7744	1/1:12:0,12,0:0:0:12,0:425,0:-38.5552,-3.61236,0,-38.5552,-3.61236,-38.5552	1/2:10:0,6,4:0:0:6,4:216,144:-29.7258,-12.1095,-10.3033,-17.976,0,-16.7719	1/1:17:0,17,0:0:0:17,0:612,0:-55.3693,-5.11751,0,-55.3693,-5.11751,-55.3693	1/2:211:0,100,111:0:0:100,111:3543,3959:-611.7,-323.085,-292.982,-288.97,0,-255.556	1/2:113:0,59,54:0:0:59,54:2109,1936:-330.064,-158.122,-140.362,-172.299,0,-156.043	1/1:141:0,141,0:0:0:141,0:4972,0:-447.626,-42.4452,0,-447.626,-42.4452,-447.626	1/1:108:0,108,0:0:0:108,0:3834,0:-345.237,-32.5112,0,-345.237,-32.5112,-345.237	1/2:50:0,27,23:0:0:27,23:960,809:-144.438,-66.2037,-58.0759,-78.5876,0,-71.6639	1/1:110:0,110,0:0:0:110,0:3885,0:-349.689,-33.1133,0,-349.689,-33.1133,-349.689	1/1:328:0,328,0:0:0:328,0:11709,0:-1053.44,-98.7378,0,-1053.44,-98.7378,-1053.44	1/1:211:0,210,0:0:0:210,0:7449,0:-670.031,-63.2163,0,-670.031,-63.2163,-670.031	1/1:11:0,11,0:0:0:11,0:394,0:-35.7991,-3.31133,0,-35.7991,-3.31133,-35.7991	1/1:265:0,264,0:0:0:264,0:9384,0:-844.09,-79.4719,0,-844.09,-79.4719,-844.09	1/1:118:0,118,0:0:0:118,0:4186,0:-376.157,-35.5215,0,-376.157,-35.5215,-376.157	1/2:120:0,61,59:0:0:61,59:2176,2101:-348.971,-171.597,-153.234,-177.73,0,-159.97	1/1:5:0,5,0:0:0:5,0:180,0:-16.5474,-1.50515,0,-16.5474,-1.50515,-16.5474	1/1:23:0,23,0:0:0:23,0:813,0:-73.485,-6.92369,0,-73.485,-6.92369,-73.485	1/1:7:0,7,0:0:0:7,0:239,0:-21.8419,-2.10721,0,-21.8419,-2.10721,-21.8419	1/2:13:0,2,11:0:0:2,11:70,388:-37.641,-31.946,-31.344,-6.04527,0,-2.73394	1/1:13:0,13,0:0:0:13,0:462,0:-41.9168,-3.91339,0,-41.9168,-3.91339,-41.9168	1/1:81:0,81,0:0:0:81,0:2890,0:-259.962,-24.3834,0,-259.962,-24.3834,-259.962	1/1:164:0,164,0:0:0:164,0:5829,0:-523.653,-49.3689,0,-523.653,-49.3689,-523.653	1/2:10:0,6,4:0:0:6,4:214,144:-29.5526,-12.1095,-10.3033,-17.8016,0,-16.5975	1/2:4:0,1,3:0:0:1,3:36,108:-12.1095,-9.17208,-8.87105,-3.29724,0,-2.39415	1/1:124:0,124,0:0:0:124,0:4390,0:-394.967,-37.3277,0,-394.967,-37.3277,-394.967	1/1:8:0,8,0:0:0:8,0:283,0:-25.7825,-2.40824,0,-25.7825,-2.40824,-25.7825	1/1:238:0,237,1:0:0:237,1:8454,36:-760.395,-71.3441,0,-757.458,-68.0469,-757.157	1/1:26:0,25,0:0:0:25,0:900,0:-80.9579,-7.52575,0,-80.9579,-7.52575,-80.9579	1/2:39:0,19,20:0:0:19,20:682,720:-114.648,-59.1082,-53.3886,-55.8991,0,-49.8785	1/1:149:0,149,0:0:0:149,0:5297,0:-476.629,-44.8535,0,-476.629,-44.8535,-476.629	1/2:143:0,59,84:0:0:59,84:2108,2997:-416.526,-244.674,-226.913,-172.209,0,-146.922	1/1:183:0,182,1:0:0:182,1:6423,36:-577.76,-54.7875,0,-574.822,-51.4902,-574.521	1/1:90:0,90,0:0:0:90,0:3181,0:-286.479,-27.0927,0,-286.479,-27.0927,-286.479	1/1:59:0,59,0:0:0:59,0:2106,0:-189.805,-17.7608,0,-189.805,-17.7608,-189.805	1/1:59:0,59,0:0:0:59,0:2105,0:-189.716,-17.7608,0,-189.716,-17.7608,-189.716	1/2:6:0,2,4:0:0:2,4:72,144:-17.9809,-12.1061,-11.504,-6.23466,0,-5.03054	1/1:113:0,113,0:0:0:113,0:4012,0:-361.224,-34.0164,0,-361.224,-34.0164,-361.224	1/1:50:0,50,0:0:0:50,0:1783,0:-160.751,-15.0515,0,-160.751,-15.0515,-160.751	1/1:9:0,9,0:0:0:9,0:315,0:-28.6881,-2.70927,0,-28.6881,-2.70927,-28.6881	1/2:172:0,97,75:0:0:97,75:3409,2700:-497.637,-220.658,-191.458,-277.335,0,-254.758	1/1:59:0,59,0:0:0:59,0:2089,0:-188.272,-17.7608,0,-188.272,-17.7608,-188.272	2/2:7:0,0,7:0:0:0,7:0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chr02	5581687	.	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chr02	5691107	.	G	A	362152	PASS	AB=0.527884;ABP=25.8982;AC=164;AF=0.87234;AN=188;AO=20895;CIGAR=1X;DP=22541;DPB=22541;DPRA=0;EPP=45323.8;EPPR=3564.23;GTI=3;LEN=1;MEANALT=1.02128;MQM=31.6009;MQMR=33.7847;NS=94;NUMALT=1;ODDS=1.63573;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=747387;QR=58682;RO=1644;RPL=20889;RPP=45323.8;RPPR=3564.23;RPR=6;RUN=1;SAF=20895;SAP=45375.9;SAR=0;SRF=1644;SRP=3572.91;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:50:0,50:0:0:50:1772:-123.418,-15.0515,0	1/1:168:1,167:1:36:167:5984:-414.803,-47.5923,0	1/1:91:0,91:0:0:91:3232:-224.732,-27.3937,0	1/1:243:0,243:0:0:243:8724:-687.882,-73.1503,0	0/1:72:26,46:26:936:46:1652:-101.642,0,-51.6689	0/1:84:29,55:29:1036:55:1961:-112.245,0,-50.5773	1/1:190:0,190:0:0:190:6798:-538.813,-57.1957,0	1/1:304:1,303:1:36:303:10792:-749.982,-88.5324,0	1/1:150:0,150:0:0:150:5362:-373.344,-45.1545,0	1/1:89:0,89:0:0:89:3196:-252.129,-26.7917,0	1/1:411:3,408:3:108:408:14576:-1149.13,-114.486,0	1/1:68:1,67:1:36:67:2404:-162.77,-17.4893,0	1/1:60:0,60:0:0:60:2146:-149.183,-18.0618,0	0/1:70:40,30:40:1423:30:1056:-59.5178,0,-88.7911	0/1:62:34,28:34:1212:28:1008:-61.3757,0,-81.4762	0/1:71:37,34:37:1328:34:1220:-71.7759,0,-82.7338	1/1:77:0,77:0:0:77:2759:-194.402,-23.1793,0	0/1:63:31,32:31:1112:32:1148:-61.6081,0,-63.9132	1/1:224:0,224:0:0:224:7995:-554.901,-67.4307,0	0/1:256:153,103:153:5463:103:3688:-213.001,0,-370.08	0/1:221:126,95:126:4496:95:3416:-187.474,0,-282.947	1/1:63:0,63:0:0:63:2245:-186.115,-18.9649,0	1/1:102:0,102:0:0:102:3664:-286.981,-30.7051,0	0/1:100:19,81:19:665:81:2908:-185.507,0,-20.7578	1/1:90:0,90:0:0:90:3232:-245.269,-27.0927,0	1/1:390:0,390:0:0:390:13908:-1156.23,-117.402,0	1/1:238:0,238:0:0:238:8533:-649.787,-71.6451,0	1/1:33:0,33:0:0:33:1184:-87.956,-9.93399,0	1/1:299:0,299:0:0:299:10717:-886.977,-90.008,0	1/1:174:1,173:1:36:173:6179:-462.827,-49.2556,0	0/1:188:104,84:104:3717:84:3012:-180.721,0,-246.962	1/1:1191:2,1189:2:72:1189:42571:-3221.97,-352.592,0	1/1:1133:2,1131:2:72:1131:40480:-3061.06,-335.132,0	1/1:676:0,676:0:0:676:24186:-1682.85,-203.496,0	1/1:521:1,520:1:36:520:18653:-1298.13,-153.856,0	1/1:1023:0,1023:0:0:1023:36628:-2546.48,-307.954,0	1/1:154:0,154:0:0:154:5532:-456.06,-46.3586,0	1/1:183:0,183:0:0:183:6537:-494.124,-55.0885,0	0/1:237:47,190:47:1662:190:6750:-397.311,0,-52.8771	1/1:366:0,366:0:0:366:13104:-993.753,-110.177,0	1/1:206:0,206:0:0:206:7370:-559.378,-62.0122,0	1/1:228:0,228:0:0:228:8148:-611.055,-68.6348,0	1/1:102:0,102:0:0:102:3638:-276.753,-30.7051,0	1/1:65:1,64:1:36:64:2277:-178.673,-16.2679,0	0/1:74:41,33:41:1460:33:1169:-68.5288,0,-97.5076	1/1:130:0,130:0:0:130:4642:-383.43,-39.1339,0	0/1:156:72,84:72:2576:84:2993:-160.034,0,-142.768	1/1:225:0,225:0:0:225:8065:-637.395,-67.7318,0	1/1:124:0,124:0:0:124:4432:-349.193,-37.3277,0	1/1:154:0,154:0:0:154:5529:-434.359,-46.3586,0	1/1:59:0,59:0:0:59:2124:-175.991,-17.7608,0	1/1:568:2,566:2:72:566:20305:-1599.34,-164.823,0	1/1:129:0,129:0:0:129:4583:-322.626,-38.8329,0	1/1:73:0,73:0:0:73:2612:-216.323,-21.9752,0	1/1:1116:0,1116:0:0:1116:39923:-2774.15,-335.949,0	0/1:199:121,78:121:4333:78:2795:-151.006,0,-275.873	1/1:71:2,69:2:72:69:2466:-190.443,-15.105,0	1/1:452:3,449:3:108:449:16076:-1323.53,-126.772,0	1/1:570:13,557:13:468:557:19849:-1602.38,-131.302,0	1/1:124:0,124:0:0:124:4444:-334.69,-37.3277,0	0/1:110:64,46:64:2292:46:1652:-98.3924,0,-149.532	1/1:752:1,751:1:36:751:26911:-2126.6,-223.076,0	1/1:84:0,84:0:0:84:3005:-243.714,-25.2865,0	0/1:285:157,128:157:5602:128:4566:-274.617,0,-371.334	1/1:55:2,53:2:72:53:1900:-137.623,-10.6217,0	1/1:128:0,128:0:0:128:4577:-361.348,-38.5318,0	0/1:262:141,121:141:5000:121:4287:-260.645,0,-329.57	1/1:110:1,109:1:36:109:3882:-305.348,-29.8143,0	1/1:289:1,288:1:36:288:10297:-773.658,-83.874,0	1/1:85:0,85:0:0:85:3025:-212.423,-25.5876,0	0/1:88:51,37:51:1820:37:1324:-82.7515,0,-128.434	1/1:918:0,918:0:0:918:32687:-2576.8,-276.346,0	1/1:85:0,85:0:0:85:3060:-211.184,-25.5876,0	0/1:80:42,38:42:1512:38:1368:-69.5055,0,-88.3027	1/1:267:1,266:1:36:266:9499:-714.697,-77.2514,0	1/1:151:0,151:0:0:151:5420:-431.383,-45.4555,0	1/1:231:2,229:2:72:229:8216:-566.447,-63.8745,0	1/1:143:0,143:0:0:143:5129:-359.316,-43.0473,0	1/1:1256:2,1253:2:72:1253:44766:-3131.27,-372.417,0	1/1:194:0,194:0:0:194:6972:-529.499,-58.3998,0	0/1:164:101,63:101:3615:63:2239:-106.198,0,-217.07	1/1:386:0,385:0:0:385:13804:-1087.47,-115.897,0	1/1:82:0,82:0:0:82:2936:-232.261,-24.6845,0	1/1:43:0,43:0:0:43:1548:-121.536,-12.9443,0	0/1:78:39,39:39:1385:39:1396:-86.566,0,-91.3234	1/1:143:1,142:1:32:142:5062:-395.315,-39.9928,0	0/1:51:21,30:21:752:30:1080:-61.0988,0,-39.3128	1/1:52:0,52:0:0:52:1853:-128.58,-15.6536,0	1/1:51:0,51:0:0:51:1817:-128.434,-15.3525,0	1/1:388:0,388:0:0:388:13863:-1047.78,-116.8,0	0/1:340:47,293:47:1665:293:10492:-692.281,0,-27.4254	0/1:78:57,21:57:2040:21:748:-36.6426,0,-145.428	1/1:7:0,7:0:0:7:252:-20.4008,-2.10721,0	1/1:95:0,95:0:0:95:3402:-268.542,-28.5979,0
chr02	6918918	.	C	T	114174	PASS	AB=0.464863;ABP=168.73;AC=93;AF=0.494681;AN=188;AO=7185;CIGAR=1X;DP=15470;DPB=15470;DPRA=0;EPP=15605;EPPR=17987.1;GTI=1;LEN=1;MEANALT=1.03191;MQM=43.3756;MQMR=59.916;NS=94;NUMALT=1;ODDS=102.588;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=257833;QR=296601;RO=8282;RPL=0;RPP=15605;RPPR=17987.1;RPR=7185;RUN=1;SAF=7185;SAP=15605;SAR=0;SRF=8282;SRP=17987.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:100:47,53:47:1671:53:1884:-136.219,0,-120.57	0/1:104:32,72:32:1152:72:2580:-195.459,0,-72.6128	0/1:393:191,202:191:6839:202:7260:-515.875,0,-497.274	0/1:410:185,225:185:6624:225:8080:-585.723,0,-472.817	0/1:105:81,24:81:2896:24:851:-42.0475,0,-229.076	0/1:40:28,12:28:1004:12:428:-25.8656,0,-78.6347	0/1:162:70,92:70:2498:92:3295:-240.083,0,-176.078	0/1:184:86,98:86:3088:98:3501:-252.255,0,-222.758	0/1:144:64,80:64:2295:80:2850:-206.583,0,-163.462	0/1:160:77,83:77:2760:83:2972:-213.754,0,-200.474	0/1:99:45,54:45:1616:54:1936:-139.828,0,-115.928	0/1:194:111,83:111:3963:83:2988:-202.73,0,-298.458	0/1:126:62,64:62:2215:64:2304:-164.46,0,-161.684	0/1:98:67,31:67:2404:31:1116:-68.8155,0,-187.103	0/1:129:103,26:103:3686:26:936:-44.188,0,-293.09	0/1:116:87,29:87:3123:29:1044:-57.0485,0,-246.376	0/1:59:31,28:31:1108:28:1004:-70.5607,0,-82.2702	0/1:42:33,9:33:1180:9:324:-16.3225,0,-93.8484	0/1:57:25,32:25:888:32:1152:-84.2278,0,-63.0803	0/1:570:415,155:415:14854:155:5548:-316.737,0,-1164.93	0/1:209:159,50:159:5698:50:1800:-94.719,0,-449.964	0/1:185:112,73:112:4004:73:2620:-175.117,0,-304.849	0/1:252:110,142:110:3948:142:5069:-368.198,0,-279.651	0/1:126:81,45:81:2903:45:1616:-104.502,0,-223.526	0/1:125:46,79:46:1652:79:2840:-211.373,0,-111.339	0/1:404:174,230:174:6235:230:8268:-603.95,0,-439.628	0/1:449:191,258:191:6852:258:9266:-678.925,0,-481.583	0/1:77:30,47:30:1080:47:1692:-124.847,0,-74.2041	0/1:455:194,261:194:6931:261:9365:-684.056,0,-486.889	0/1:190:86,104:86:3092:104:3744:-273.104,0,-221.311	0/1:144:108,36:108:3872:36:1283:-70.4743,0,-305.326	0/1:14:6,8:6:216:8:288:-21.4637,0,-15.5761	0/1:38:14,24:14:504:24:860:-64.7988,0,-34.259	0/1:5:1,4:1:36:4:144:-10.9926,0,-2.09312	0/0:16:15,1:15:528:1:36:0,-1.28036,-44.3152	0/1:24:11,13:11:387:13:464:-34.1723,0,-27.9412	0/1:392:192,200:192:6896:200:7196:-512.375,0,-502.701	0/1:206:104,102:104:3724:102:3668:-260.608,0,-273.293	0/1:83:62,21:62:2232:21:756:-41.1921,0,-175.913	0/1:6:3,3:3:104:3:108:-8.09496,0,-7.89663	0/1:260:116,143:116:4134:143:5128:-372.059,0,-293.918	0/1:68:30,38:30:1072:38:1368:-100.491,0,-76.3224	0/1:198:113,85:113:4042:85:3047:-207.589,0,-304.363	0/1:127:55,72:55:1976:72:2592:-189.863,0,-139.884	0/1:93:59,34:59:2120:34:1224:-79.0786,0,-163.065	0/1:230:102,128:102:3638:128:4595:-334.85,0,-258.388	0/1:143:115,28:115:4115:28:995:-45.0637,0,-327.473	0/1:244:128,116:128:4591:116:4138:-291.817,0,-339.901	0/1:139:87,52:87:3120:52:1864:-122.036,0,-239.181	0/1:220:98,122:98:3520:122:4361:-317.272,0,-250.782	0/1:311:142,168:142:5071:168:6027:-436.661,0,-362.856	0/1:9:7,2:7:244:2:72:-4.00936,0,-19.5902	0/1:317:174,143:174:6235:143:5136:-356.673,0,-465.817	0/1:147:70,77:70:2508:77:2755:-198.701,0,-181.721	0/1:22:5,17:5:176:17:612:-47.2599,0,-9.56236	0/1:206:151,55:151:5396:55:1971:-112.484,0,-423.76	0/1:89:39,50:39:1375:50:1792:-129.864,0,-97.2562	0/1:15:9,6:9:324:6:212:-14.5872,0,-24.9904	0/1:27:18,9:18:644:9:324:-20.8684,0,-50.1628	0/1:122:62,59:62:2220:59:2124:-150.195,0,-163.28	0/1:197:141,56:141:5072:56:2008:-118.47,0,-397.274	0/1:7:2,5:2:72:5:180:-14.159,0,-4.72951	0/1:339:158,181:158:5664:181:6497:-470.127,0,-407.474	0/1:204:137,67:137:4907:67:2404:-150.079,0,-380.354	0/1:121:40,81:40:1420:81:2912:-220.951,0,-91.6728	0/1:106:67,39:67:2400:39:1400:-91.9669,0,-184.348	0/1:220:150,70:150:5365:70:2516:-155.945,0,-416.738	0/1:299:120,179:120:4287:179:6412:-474.713,0,-296	0/1:67:36,31:36:1287:31:1116:-78.4095,0,-95.9638	0/1:85:36,49:36:1288:49:1760:-129.811,0,-90.636	0/1:69:45,24:45:1620:24:856:-53.6786,0,-125.319	0/1:51:19,32:19:680:32:1152:-83.1702,0,-46.1766	0/1:203:92,111:92:3300:111:3992:-290.055,0,-236.109	0/1:147:98,49:98:3515:49:1756:-110.117,0,-272.282	0/1:205:81,124:81:2904:124:4456:-328.49,0,-199.88	0/1:355:179,176:179:6400:176:6328:-448.583,0,-469.221	0/1:220:141,79:141:5072:79:2829:-183.217,0,-390.36	0/1:220:121,99:121:4340:99:3560:-247.34,0,-324.548	0/1:23:11,12:11:396:12:432:-31.1826,0,-29.0138	0/1:276:156,120:156:5584:120:4304:-295.103,0,-419.599	0/1:185:129,56:129:4628:56:2007:-120.859,0,-360.959	0/1:293:133,160:133:4755:160:5752:-417.507,0,-339.82	0/1:117:60,57:60:2144:57:2048:-143.997,0,-158.007	0/1:122:46,76:46:1644:76:2736:-204.496,0,-111.523	0/1:80:52,28:52:1872:28:1003:-64.2138,0,-144.677	0/1:277:136,141:136:4871:141:5068:-362.655,0,-355.157	0/1:31:23,8:23:828:8:288:-16.4818,0,-65.5122	0/1:162:83,79:83:2980:79:2840:-201.112,0,-219.108	0/1:183:87,96:87:3128:96:3452:-248.846,0,-226.657	0/1:72:37,35:37:1324:35:1252:-89.4685,0,-97.7861	0/1:201:156,45:156:5586:45:1620:-82.3893,0,-442.328	0/1:174:151,23:151:5406:23:828:-20.6648,0,-434.277	0/1:253:112,141:112:4004:141:5032:-366.005,0,-284.385	0/1:227:128,99:128:4579:99:3564:-244.413,0,-343.941
chr02	6918925	.	CGCCT	TGCCA,TGCCT	321437	PASS	AB=0.471557,0.52239;ABP=110.973,69.9104;AC=93,95;AF=0.494681,0.505319;AN=188;AO=7246,8041;CIGAR=1X3M1X,1X4M;DP=15380;DPB=15380;DPRA=0,0;EPP=15366.2,11074.6;EPPR=18.2106;GTI=1;LEN=5,1;MEANALT=2.7766,2.7766;MQM=43.3808,59.933;MQMR=56.5714;NS=94;NUMALT=2;ODDS=105.782;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=252369,287820;QR=245;RO=7;RPL=43,819;RPP=15366.2,11074.6;RPPR=18.2106;RPR=7203,7222;RUN=1,1;SAF=7246,8041;SAP=15737.5,17463.8;SAR=0,0;SRF=7;SRP=18.2106;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:100:0,53,45:0:0:53,45:1851,1612:-278.472,-131.486,-115.532,-146.998,0,-133.452	1/2:105:0,73,32:0:0:73,32:2538,1133:-293.949,-92.6299,-70.6547,-201.668,0,-192.035	1/2:390:0,200,189:0:0:200,189:6965,6750:-1100.49,-550.326,-490.12,-550.154,0,-493.26	1/2:401:2,224,174:2:72:224,174:7789,6227:-1120.08,-501.934,-440.379,-612.886,0,-566.382	1/2:103:0,24,79:0:0:24,79:841,2828:-296.489,-230.973,-223.748,-65.8575,0,-42.0761	1/2:39:0,12,27:0:0:12,27:413,968:-112.094,-79.3096,-75.6972,-33.1276,0,-24.9998	1/2:161:0,93,67:0:0:93,67:3200,2374:-447.374,-193.364,-165.368,-253.997,0,-233.828	1/2:184:0,100,83:0:0:100,83:3493,2976:-520.129,-242.797,-212.694,-277.393,0,-252.408	1/2:141:0,82,59:0:0:82,59:2839,2111:-397.86,-172.498,-147.813,-225.712,0,-207.952	1/2:159:0,82,76:0:0:82,76:2816,2715:-445.274,-221.463,-196.779,-223.907,0,-201.028	1/2:97:0,52,43:0:0:52,43:1789,1536:-267.995,-125.327,-109.673,-142.754,0,-129.809	1/2:191:0,84,106:0:0:84,106:2959,3787:-542.788,-308.827,-283.541,-234.021,0,-202.111	1/2:129:0,68,60:0:0:68,60:2375,2144:-362.708,-174.875,-154.405,-187.891,0,-169.829	1/2:95:0,31,64:0:0:31,64:1093,2287:-273.549,-186.812,-177.48,-87.0849,0,-67.819	1/2:125:0,25,99:0:0:25,99:879,3540:-358.88,-288.629,-281.103,-70.2399,0,-40.4379	1/2:114:0,30,84:0:0:30,84:1032,3001:-327.027,-245.035,-236.004,-82.3342,0,-57.0477	1/2:54:0,26,28:0:0:26,28:910,1004:-154.57,-82.247,-74.4202,-72.6733,0,-64.2444	1/2:42:0,9,33:0:0:9,33:315,1188:-122.457,-97.2783,-94.569,-25.5263,0,-15.5923	1/2:58:0,33,25:0:0:33,25:1152,900:-165.394,-73.7953,-63.8613,-91.9513,0,-84.4256	1/2:563:0,158,404:0:0:158,404:5491,14466:-1616.6,-1179.69,-1132.13,-436.894,0,-315.278	1/2:208:0,49,155:0:0:49,155:1711,5529:-586.4,-450.723,-435.973,-135.685,0,-89.0252	1/2:185:0,75,107:0:0:75,107:2620,3810:-518.861,-310.547,-287.97,-208.328,0,-176.118	1/2:252:0,141,108:0:0:141,108:4891,3872:-702.48,-315.873,-273.428,-386.666,0,-354.155	1/2:121:1,45,74:1:36:45,74:1563,2645:-336.907,-212.722,-202.113,-121.588,0,-102.25	1/2:126:0,79,46:0:0:79,46:2759,1652:-352.929,-134.811,-111.03,-218.161,0,-204.313	1/2:407:0,232,170:0:0:232,170:8065,6053:-1133.65,-493.337,-423.498,-640.303,0,-589.128	1/2:448:0,259,186:0:0:259,186:9040,6659:-1263.21,-543.084,-465.117,-720.168,0,-664.176	1/2:77:0,46,30:0:0:46,30:1590,1071:-212.709,-87.2314,-73.384,-125.516,0,-116.485	1/2:463:0,267,192:0:0:267,192:9283,6896:-1299.91,-562.587,-482.212,-737.366,0,-679.568	1/2:187:0,104,82:0:0:104,82:3648,2944:-531.154,-240.149,-208.842,-290.997,0,-266.313	1/2:144:0,37,107:0:0:37,107:1288,3836:-416.205,-313.226,-302.088,-103.326,0,-71.1162	1/2:14:0,8,6:0:0:8,6:273,216:-39.7462,-17.9843,-15.5761,-22.1114,0,-20.3052	1/2:38:0,24,14:0:0:24,14:842,504:-108.669,-41.4837,-34.259,-67.5393,0,-63.3249	1/2:5:0,4,1:0:0:4,1:143,36:-14.1549,-3.29724,-2.09312,-11.2126,0,-10.9116	2/2:16:0,1,15:0:0:1,15:36,540:-48.5825,-45.7014,-45.4004,-4.51545,-1.28036,0	1/2:24:0,11,10:0:0:11,10:373,360:-59.1575,-29.3774,-26.066,-29.7747,0,-26.7644	1/2:391:0,203,187:0:0:203,187:7098,6705:-1109.81,-546.871,-485.762,-562.927,0,-506.635	1/2:206:0,104,100:0:0:104,100:3621,3592:-580.867,-293.087,-261.78,-287.844,0,-257.741	1/2:82:0,21,61:0:0:21,61:751,2188:-237.911,-178.805,-172.484,-59.4555,0,-41.0927	1/2:5:0,3,2:0:0:3,2:102,72:-14.3837,-6.23466,-5.33157,-8.49927,0,-7.89721	1/2:260:0,145,113:0:0:145,113:5083,4047:-733.4,-330.041,-286.391,-403.351,0,-369.335	1/2:67:0,38,29:0:0:38,29:1325,1044:-191.199,-85.5449,-74.1058,-106.006,0,-97.2765	1/2:196:0,86,110:0:0:86,110:2980,3937:-557.691,-321.407,-295.518,-236.631,0,-203.517	1/2:129:1,74,53:1:36:74,53:2588,1904:-358.302,-152.386,-133.047,-203.272,0,-190.255	1/2:91:0,34,57:0:0:34,57:1211,2052:-263.294,-167.784,-157.549,-95.8609,0,-78.7022	1/2:229:0,129,100:0:0:129,100:4504,3580:-650.441,-292.304,-253.471,-358.487,0,-328.384	1/2:141:2,28,109:2:72:28,109:991,3899:-390.455,-312.047,-309.493,-73.1258,0,-46.1891	1/2:244:0,119,124:0:0:119,124:4060,4448:-686.432,-362.89,-327.068,-323.618,0,-286.29	1/2:139:0,54,85:0:0:54,85:1851,3025:-394.018,-246.89,-230.634,-147.471,0,-121.884	1/2:220:0,124,96:0:0:124,96:4318,3421:-621.759,-279.205,-241.877,-342.904,0,-314.005	1/2:312:0,170,141:0:0:170,141:5915,5052:-882.953,-412.169,-360.993,-470.924,0,-428.479	1/2:7:0,2,5:0:0:2,5:72,180:-20.8081,-15.0469,-14.4449,-6.11657,0,-4.61142	1/2:318:0,146,170:0:0:146,170:5096,6082:-901.728,-496.01,-452.06,-405.771,0,-354.596	1/2:149:0,78,71:0:0:78,71:2729,2544:-425.445,-207.838,-184.357,-217.95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chr02	7458823	.	G	A	39473.8	PASS	AB=0.477068;ABP=25.319;AC=51;AF=0.271277;AN=188;AO=2349;CIGAR=1X;DP=9537;DPB=9537;DPRA=1.18687;EPP=4965.77;EPPR=13758.6;GTI=0;LEN=1;MEANALT=1.04918;MQM=59.9762;MQMR=59.9698;NS=94;NUMALT=1;ODDS=7.77488;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=84166;QR=256768;RO=7184;RPL=16;RPP=4965.77;RPPR=13766.8;RPR=2333;RUN=1;SAF=2349;SAP=5103.8;SAR=0;SRF=7183;SRP=15594.2;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:38,35:38:1356:35:1256:-91.3701,0,-100.365	0/0:110:107,2:107:3814:2:72:0,-26.3354,-336.512	0/0:460:459,1:459:16395:1:36:0,-134.876,-1471.51	0/1:217:93,124:93:3324:124:4436:-334.088,0,-234.055	0/1:38:18,20:18:644:20:716:-53.3286,0,-46.8515	0/1:21:5,16:5:180:16:576:-45.8534,0,-10.2304	0/1:87:42,45:42:1476:45:1605:-118.549,0,-106.942	0/0:113:113,0:113:4056:0:0:0,-34.0164,-365.226	0/1:168:91,77:91:3219:77:2752:-197.29,0,-239.356	0/1:110:62,48:62:2224:48:1724:-122.332,0,-167.311	0/0:83:83,0:83:2971:0:0:0,-24.9855,-267.622	0/1:120:57,63:57:2023:63:2259:-167.441,0,-146.219	0/0:68:68,0:68:2425:0:0:0,-20.47,-218.504	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/1:62:32,30:32:1125:30:1080:-78.8494,0,-82.8922	0/0:31:30,1:30:1080:1:36:0,-5.73365,-93.915	0/0:31:31,0:31:1103:0:0:0,-9.33193,-99.5798	0/1:30:16,14:16:576:14:504:-36.6672,0,-43.1441	0/1:180:92,87:92:3289:87:3105:-225.432,0,-241.984	0/1:163:93,70:93:3344:70:2508:-176.904,0,-252.108	0/0:63:63,0:63:2252:0:0:0,-18.9649,-202.943	0/1:167:71,96:71:2496:96:3452:-260.619,0,-174.615	0/0:124:119,5:119:4257:5:180:0,-20.7803,-365.398	0/1:71:46,24:46:1648:24:852:-55.5687,0,-127.177	0/0:334:334,0:334:11861:0:0:0,-100.544,-1067.14	0/1:271:147,124:147:5238:124:4422:-316.571,0,-389.977	0/1:39:16,23:16:572:23:828:-63.1039,0,-40.0733	0/0:254:253,1:253:9050:1:36:0,-72.8633,-810.876	0/1:123:75,48:75:2696:48:1724:-118.419,0,-205.857	0/0:131:131,0:131:4669:0:0:0,-39.4349,-420.369	0/0:32:32,0:32:1136:0:0:0,-9.63296,-102.549	0/1:29:14,15:14:500:15:536:-39.8449,0,-36.6063	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:35:18,17:18:644:17:612:-44.8774,0,-47.7545	0/0:220:220,0:220:7860:0:0:0,-66.2266,-707.427	0/1:75:44,31:44:1580:31:1116:-78.1698,0,-119.914	0/1:59:27,32:27:964:32:1141:-85.2374,0,-69.3161	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/0:99:97,2:97:3472:2:72:0,-22.9652,-305.855	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/1:118:67,51:67:2378:51:1808:-127.477,0,-178.753	0/1:59:31,28:31:1092:28:1008:-73.2756,0,-80.8261	0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.705	0/1:95:43,52:43:1525:52:1857:-138.811,0,-108.937	0/0:113:113,0:113:4048:0:0:0,-34.0164,-364.507	0/0:171:171,0:171:6127:0:0:0,-51.4761,-551.522	0/1:143:87,56:87:3112:56:2003:-137.496,0,-237.26	0/1:126:57,69:57:2040:69:2480:-185.523,0,-145.942	0/1:213:104,109:104:3697:109:3916:-288.512,0,-268.813	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:215:156,59:156:5573:59:2105:-124.996,0,-436.971	0/1:43:26,17:26:936:17:612:-42.4691,0,-71.6152	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:156:154,2:154:5498:2:72:0,-40.124,-488.108	0/1:63:40,23:40:1436:23:812:-54.4355,0,-110.573	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/1:93:53,40:53:1892:40:1436:-101.542,0,-142.562	0/0:86:86,0:86:3096:0:0:0,-25.8886,-278.865	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/1:206:105,101:105:3726:101:3616:-263.634,0,-273.528	0/0:124:124,0:124:4452:0:0:0,-37.3277,-400.849	0/1:70:19,51:19:684:51:1832:-144.084,0,-40.8182	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/1:189:123,66:123:4412:66:2372:-156.843,0,-340.357	0/0:193:191,2:191:6818:2:72:0,-51.2621,-606.696	0/1:52:21,31:21:756:31:1116:-85.0981,0,-52.7137	0/1:64:35,29:35:1241:29:1044:-75.0089,0,-92.7266	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:97:97,0:97:3456:0:0:0,-29.1999,-311.254	0/0:160:160,0:160:5721:0:0:0,-48.1648,-515.006	0/0:192:191,0:191:6827:0:0:0,-57.4967,-614.132	0/0:160:160,0:160:5733:0:0:0,-48.1648,-516.084	0/1:114:64,50:64:2304:50:1792:-127.245,0,-173.303	0/1:105:62,43:62:2220:43:1540:-107.285,0,-168.456	0/1:20:9,11:9:324:11:392:-29.5995,0,-23.4853	0/1:83:42,41:42:1503:41:1476:-108.151,0,-110.578	0/1:82:46,36:46:1656:36:1296:-92.2595,0,-124.644	0/0:202:202,0:202:7256:0:0:0,-60.8081,-653.083	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:87:87,0:87:3124:0:0:0,-26.1896,-281.386	0/0:54:54,0:54:1925:0:0:0,-16.2556,-173.525	0/1:136:55,81:55:1972:81:2897:-220.024,0,-136.815	0/1:38:15,23:15:540:23:828:-63.405,0,-37.4974	0/1:91:54,37:54:1944:37:1332:-92.7887,0,-147.842	0/1:75:44,31:44:1580:31:1112:-77.8141,0,-119.914	0/1:34:24,10:24:864:10:356:-22.1462,0,-67.8475	0/1:87:34,53:34:1209:53:1900:-145.088,0,-82.9245	0/1:108:29,79:29:1044:79:2836:-222.967,0,-61.7636	0/0:132:131,1:131:4664:1:36:0,-36.1377,-416.322	0/0:108:106,2:106:3808:2:72:0,-25.6745,-336.08
chr02	7690261	.	A	G	103329	PASS	AB=0.458487;ABP=63.7671;AC=136;AF=0.723404;AN=188;AO=5287;CIGAR=1X;DP=7502;DPB=7502;DPRA=0;EPP=11483.6;EPPR=4806.31;GTI=0;LEN=1;MEANALT=1.03191;MQM=41.7725;MQMR=44.0339;NS=94;NUMALT=1;ODDS=3.92043;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=188903;QR=77819;RO=2212;RPL=0;RPP=11483.6;RPPR=4806.31;RPR=5287;RUN=1;SAF=5287;SAP=11483.6;SAR=0;SRF=2212;SRP=4806.31;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:23,20:23:798:20:705:-47.0684,0,-55.7781	1/1:99:0,99:0:0:99:3533:-299.666,-29.802,0	1/1:141:2,139:2:72:139:4969:-412.904,-35.8319,0	0/1:140:72,68:72:2516:68:2440:-171.799,0,-182.127	0/1:58:18,40:18:603:40:1436:-107.454,0,-36.0649	0/1:79:38,41:38:1310:41:1442:-99.1213,0,-91.0296	0/1:124:72,52:72:2547:52:1852:-126.012,0,-189.435	1/1:108:3,105:3:108:105:3760:-306.918,-22.7653,0	0/1:72:45,27:45:1571:27:966:-59.4759,0,-115.636	0/1:81:41,40:41:1453:40:1428:-101.422,0,-105.221	1/1:48:0,48:0:0:48:1690:-148.1,-14.4494,0	0/1:47:22,25:22:788:25:900:-61.1935,0,-54.0893	1/1:43:0,43:0:0:43:1544:-130.842,-12.9443,0	1/1:54:0,54:0:0:54:1936:-168.707,-16.2556,0	1/1:43:0,43:0:0:43:1548:-136.595,-12.9443,0	0/1:40:20,20:20:701:20:720:-50.6629,0,-50.0071	1/1:40:0,39:0:0:39:1396:-118.231,-11.7402,0	1/1:22:0,22:0:0:22:792:-67.1251,-6.62266,0	0/1:41:14,27:14:504:27:972:-69.406,0,-31.8291	0/1:155:74,81:74:2611:81:2912:-208.011,0,-185.838	0/1:144:77,67:77:2727:67:2389:-164.482,0,-197.033	1/1:140:0,140:0:0:140:5011:-442.143,-42.1442,0	0/1:56:28,28:28:1004:28:1008:-72.0294,0,-72.7358	1/1:130:7,123:7:252:123:4362:-356.997,-16.6363,0	0/1:89:56,33:56:1925:33:1188:-77.0834,0,-142.731	1/1:203:0,202:0:0:202:7249:-638.671,-60.8081,0	0/1:188:115,73:115:4007:73:2624:-170.583,0,-296.14	0/1:38:19,19:19:669:19:665:-46.8743,0,-47.8639	1/1:199:0,199:0:0:199:7125:-631.23,-59.905,0	0/1:124:63,61:63:2200:61:2176:-150.761,0,-156.322	1/1:76:0,76:0:0:76:2732:-240.338,-22.8783,0	1/1:20:0,20:0:0:20:716:-61.4006,-6.0206,0	0/1:17:12,5:12:432:5:180:-10.8937,0,-33.3317	1/1:8:0,8:0:0:8:288:-24.7295,-2.40824,0	1/1:6:0,6:0:0:6:216:-18.6318,-1.80618,0	0/1:21:4,17:4:140:17:612:-45.3342,0,-6.24969	1/1:155:0,154:0:0:154:5520:-488.58,-46.3586,0	0/1:235:124,111:124:4392:111:3958:-272.752,0,-308.457	0/1:44:29,15:29:1036:15:540:-33.017,0,-77.2264	0/1:7:2,5:2:72:5:180:-13.904,0,-4.58271	1/1:151:0,151:0:0:151:5390:-468.966,-45.4555,0	1/1:30:0,30:0:0:30:1076:-92.8547,-9.0309,0	0/1:117:77,40:77:2670:40:1440:-89.5165,0,-199.885	0/1:42:24,18:24:864:18:644:-44.4913,0,-64.5963	1/1:41:0,41:0:0:41:1476:-130.39,-12.3422,0	0/1:101:53,48:53:1885:48:1694:-118.353,0,-138.261	1/1:83:0,83:0:0:83:2969:-250.862,-24.9855,0	1/1:105:1,104:1:36:104:3672:-319.994,-28.0871,0	0/1:93:41,52:41:1438:52:1845:-133.957,0,-100.234	0/1:138:65,73:65:2325:73:2585:-186.139,0,-165.469	0/1:238:139,99:139:4962:99:3525:-239.011,0,-370.445	0/1:11:7,4:7:243:4:144:-9.51107,0,-18.5178	0/1:106:59,47:59:2063:47:1684:-110.392,0,-148.186	0/1:23:16,7:16:576:7:237:-14.3215,0,-44.8777	1/1:11:0,11:0:0:11:392:-33.4927,-3.31133,0	1/1:123:0,123:0:0:123:4412:-381.6,-37.0267,0	0/1:53:37,16:37:1316:16:568:-34.4581,0,-101.027	1/1:13:0,13:0:0:13:468:-41.8475,-3.91339,0	0/1:18:7,11:7:252:11:396:-30.0416,0,-17.4741	0/1:66:38,28:38:1334:28:1004:-68.1223,0,-97.9385	1/1:92:0,92:0:0:92:3270:-288.17,-27.6948,0	0/1:5:4,1:4:144:1:36:-2.01586,0,-11.5922	0/1:170:73,97:73:2586:97:3473:-256.981,0,-179.538	1/1:181:0,181:0:0:181:6473:-567.842,-54.4864,0	0/1:45:26,19:26:921:19:676:-45.2852,0,-67.8211	1/1:66:0,66:0:0:66:2349:-206.679,-19.868,0	0/1:149:79,70:79:2802:70:2475:-173.134,0,-204.843	1/1:80:1,79:1:36:79:2828:-243.202,-20.5238,0	0/1:13:10,3:10:352:3:108:-5.83256,0,-27.4665	0/1:89:54,35:54:1883:35:1245:-78.0891,0,-136.83	1/1:49:0,49:0:0:49:1764:-156.52,-14.7505,0	1/1:13:0,13:0:0:13:468:-41.4143,-3.91339,0	1/1:119:0,119:0:0:119:4231:-357.248,-35.8226,0	1/1:56:0,56:0:0:56:2008:-170.281,-16.8577,0	1/1:103:0,103:0:0:103:3674:-318.994,-31.0061,0	1/1:160:0,160:0:0:160:5717:-502.488,-48.1648,0	0/1:117:77,40:77:2669:40:1421:-85.6753,0,-197.106	0/1:32:21,11:21:752:11:392:-23.6395,0,-56.2647	0/1:5:3,2:3:108:2:72:-4.93129,0,-8.2408	0/1:67:46,21:46:1622:21:752:-44.3217,0,-123.134	0/1:91:45,46:45:1537:46:1646:-111.876,0,-106.747	1/1:118:0,118:0:0:118:4232:-372.569,-35.5215,0	1/1:88:0,88:0:0:88:3152:-273.033,-26.4906,0	1/1:27:0,27:0:0:27:972:-85.9126,-8.12781,0	1/1:59:0,59:0:0:59:2093:-184.171,-17.7608,0	0/1:130:64,66:64:2243:66:2331:-166.676,0,-160.616	0/1:23:13,10:13:460:10:360:-23.8229,0,-33.5455	0/1:67:37,30:37:1313:30:1080:-71.1535,0,-94.1992	0/1:50:22,28:22:788:28:1008:-69.6657,0,-53.8297	0/1:16:9,7:9:279:7:239:-16.3563,0,-20.2371	0/1:83:44,39:44:1569:39:1404:-97.0529,0,-113.465	0/1:58:40,18:40:1353:18:644:-39.455,0,-102.735	1/1:85:0,85:0:0:85:3041:-266.197,-25.5876,0	1/1:55:0,55:0:0:55:1968:-173.634,-16.5567,0
chr02	9607796	.	TAGACA	TAGAGACA	280644	PASS	AB=0.499125;ABP=3.03689;AC=158;AF=0.840426;AN=188;AO=13059;CIGAR=1M2I5M;DP=15189;DPB=19578.2;DPRA=0;EPP=28351.6;EPPR=4324.26;GTI=2;LEN=2;MEANALT=2.20213;MQM=59.7117;MQMR=59.9454;NS=94;NUMALT=1;ODDS=6.93954;PAIRED=0;PAIREDR=0;PAO=7.5;PQA=195.333;PQR=195.333;PRO=7.5;QA=457473;QR=70364;RO=1998;RPL=13058;RPP=28351.6;RPPR=4324.26;RPR=1;RUN=1;SAF=13059;SAP=28360.3;SAR=0;SRF=1998;SRP=4341.61;SRR=0;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	1/1:107:0,105:0:0:105:3697:-332.397,-31.6082,0	1/1:262:0,261:0:0:261:9130:-821.17,-78.5688,0	1/1:243:0,240:0:0:240:8404:-755.313,-72.2472,0	1/1:253:1,249:1:36:249:8675:-777.112,-71.9963,0	0/1:112:50,62:50:1771:62:2132:-158.406,0,-125.959	0/1:94:42,50:42:1470:50:1754:-130.097,0,-104.559	1/1:305:0,299:0:0:299:10434:-938.383,-90.008,0	1/1:314:0,312:0:0:312:10958:-985.471,-93.9214,0	1/1:158:0,155:0:0:155:5405:-486.224,-46.6597,0	1/1:186:0,185:0:0:185:6520:-586.517,-55.6906,0	1/1:65:0,62:0:0:62:2175:-195.592,-18.6639,0	1/1:94:0,92:0:0:92:3184:-286.416,-27.6948,0	1/1:80:0,79:0:0:79:2721:-244.715,-23.7814,0	0/1:85:55,30:55:1925:30:1031:-67.5086,0,-147.939	0/1:74:40,34:40:1425:34:1192:-85.308,0,-106.271	0/1:85:49,36:49:1727:36:1288:-90.636,0,-130.128	1/1:69:0,69:0:0:69:2424:-218.394,-20.7711,0	0/1:72:34,37:34:1216:37:1312:-96.6231,0,-88.0142	1/1:56:0,55:0:0:55:1941:-174.638,-16.5567,0	0/1:342:192,147:192:6757:147:5161:-362.253,0,-505.786	0/1:273:138,135:138:4805:135:4719:-342.668,0,-350.424	1/1:168:0,166:0:0:166:5795:-521.298,-49.971,0	1/1:148:0,145:0:0:145:5112:-459.867,-43.6494,0	0/1:247:110,136:110:3867:136:4717:-350.134,0,-273.82	1/1:167:1,165:1:36:165:5820:-520.307,-46.7325,0	1/1:634:1,632:1:27:632:22199:-1994.53,-188.194,0	1/1:404:1,399:1:36:399:13965:-1252.9,-117.173,0	1/1:55:0,55:0:0:55:1927:-173.693,-16.5567,0	1/1:386:1,382:1:36:382:13457:-1207.33,-112.061,0	1/1:179:1,175:1:36:175:6185:-553.145,-49.7385,0	0/1:214:119,95:119:4181:95:3322:-234.572,0,-311.953	1/1:7:0,7:0:0:7:244:-22.2994,-2.10721,0	1/1:26:0,23:0:0:23:820:-73.7539,-6.92369,0	1/1:10:0,10:0:0:10:352:-32.0182,-3.0103,0	0/1:22:16,6:16:571:6:208:-12.4364,0,-45.1005	1/1:16:0,16:0:0:16:564:-51.0903,-4.81648,0	1/1:269:1,266:1:28:266:9352:-838.762,-77.882,0	1/1:301:0,301:0:0:301:10540:-948.116,-90.61,0	0/1:83:38,43:38:1333:43:1513:-111.671,0,-95.5281	0/1:6:5,1:5:176:1:36:-1.79209,0,-14.3788	1/1:261:2,259:2:72:259:9047:-807.255,-71.7622,0	1/1:63:0,63:0:0:63:2236:-201.489,-18.9649,0	1/1:217:0,213:0:0:213:7451:-670.262,-64.1194,0	1/1:116:0,116:0:0:116:4113:-370.265,-34.9195,0	0/1:86:48,37:48:1679:37:1307:-91.9911,0,-125.459	1/1:212:0,208:0:0:208:7251:-652.175,-62.6142,0	0/1:217:104,110:104:3662:110:3821:-279.314,0,-265.065	1/1:373:3,365:3:102:365:12778:-1140.2,-101.601,0	1/1:270:0,267:0:0:267:9344:-840.571,-80.375,0	1/1:222:1,220:1:36:220:7755:-694.354,-63.3217,0	1/1:363:1,360:1:36:360:12588:-1129.03,-105.433,0	0/1:13:11,2:11:394:2:72:-2.92333,0,-31.8881	1/1:241:1,240:1:36:240:8330:-745.926,-68.95,0	1/1:70:0,70:0:0:70:2435:-219.384,-21.0721,0	1/1:30:0,30:0:0:30:1060:-95.7031,-9.0309,0	0/1:253:123,130:123:4312:130:4526:-331.225,0,-312.102	1/1:110:1,109:1:36:109:3814:-339.851,-29.515,0	0/1:20:7,12:7:238:12:432:-33.2801,0,-15.8055	0/1:23:14,9:14:492:9:316:-21.8524,0,-37.6887	1/1:140:0,138:0:0:138:4787:-430.534,-41.5421,0	0/1:125:57,67:57:2023:67:2364:-175.328,0,-144.656	1/1:7:0,7:0:0:7:240:-21.9347,-2.10721,0	1/1:279:0,276:0:0:276:9693:-871.961,-83.0843,0	0/1:372:156,212:156:5500:212:7437:-558.3,0,-384.051	0/1:103:11,90:11:392:90:3158:-253.693,0,-4.87391	1/1:106:2,104:2:61:104:3608:-318.952,-26.1159,0	0/1:295:147,144:147:5131:144:5104:-371.498,0,-373.985	1/1:200:2,195:2:71:195:6881:-612.609,-52.9177,0	1/1:25:0,25:0:0:25:884:-79.8646,-7.52575,0	1/1:169:0,165:0:0:165:5760:-518.144,-49.67,0	0/1:134:63,71:63:2248:71:2443:-179.781,0,-162.246	1/1:36:0,36:0:0:36:1257:-113.151,-10.8371,0	1/1:164:1,161:1:27:161:5634:-504.214,-46.3844,0	0/1:132:54,73:54:1914:73:2562:-192.219,0,-133.937	1/1:330:1,326:1:36:326:11274:-1010.94,-95.1967,0	1/1:278:0,277:0:0:277:9687:-871.367,-83.3853,0	1/1:206:0,203:0:0:203:7166:-644.618,-61.1091,0	1/1:169:0,168:0:0:168:5916:-532,-50.573,0	1/1:18:0,17:0:0:17:596:-53.6093,-5.11751,0	1/1:189:1,187:1:36:187:6538:-584.902,-53.3549,0	0/1:185:107,78:107:3799:78:2747:-191.756,0,-286.422	1/1:433:0,432:0:0:432:15134:-1361.35,-130.045,0	1/1:150:0,149:0:0:149:5238:-471.186,-44.8535,0	1/1:71:0,70:0:0:70:2492:-224.195,-21.0721,0	0/1:86:50,36:50:1780:36:1267:-88.4423,0,-134.595	1/1:172:0,170:0:0:170:5963:-536.414,-51.1751,0	0/1:66:25,41:25:892:41:1442:-109.936,0,-60.7321	1/1:95:0,94:0:0:94:3303:-297.095,-28.2968,0	1/1:90:0,90:0:0:90:3181:-286.468,-27.0927,0	1/1:31:0,30:0:0:30:1036:-93.1849,-9.0309,0	0/1:93:48,44:48:1701:44:1521:-109.114,0,-125.266	0/1:89:60,29:60:2127:29:1021:-65.4062,0,-164.908	1/1:186:2,184:2:72:184:6398:-569.065,-49.1549,0	1/1:134:0,133:0:0:133:4680:-420.792,-40.037,0
chr02	10972982	.	A	G	89259.8	PASS	AB=0.339169;ABP=4263.74;AC=91;AF=0.484043;AN=188;AO=6455;CIGAR=1X;DP=19440;DPB=19440;DPRA=20.8925;EPP=14019.9;EPPR=28184.4;GTI=18;LEN=1;MEANALT=1.04301;MQM=59.8158;MQMR=42.2818;NS=94;NUMALT=1;ODDS=2.26548;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=229825;QR=464875;RO=12978;RPL=6455;RPP=14019.9;RPPR=19620.5;RPR=0;RUN=1;SAF=6455;SAP=14019.9;SAR=0;SRF=1075;SRP=19620.5;SRR=11903;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:119:65,54:65:2304:54:1905:-135.827,0,-164.174	0/1:283:247,36:247:8864:36:1288:-31.0321,0,-684.892	0/1:244:145,99:145:5180:99:3490:-240.818,0,-374.538	0/1:503:268,235:268:9616:235:8405:-604.539,0,-684.53	0/1:183:163,20:163:5816:20:720:-10.0403,0,-452.685	0/1:110:87,23:87:3102:23:824:-41.37,0,-239.842	0/1:225:178,47:178:6383:47:1683:-84.0221,0,-486.221	0/1:472:348,124:348:12437:124:4430:-256.696,0,-934.929	0/1:192:112,79:112:4020:79:2799:-194.436,0,-291.953	0/1:198:152,46:152:5444:46:1652:-89.3636,0,-411.299	0/1:152:65,87:65:2320:87:3112:-234.542,0,-156.118	0/1:219:105,114:105:3743:114:4035:-297.41,0,-259.665	0/1:120:62,58:62:2208:58:2076:-150.983,0,-156.558	0/1:170:112,58:112:3988:58:2059:-133.846,0,-299.972	0/1:138:105,33:105:3754:33:1180:-64.9632,0,-286.454	0/1:123:98,25:98:3491:25:878:-42.3092,0,-270.609	0/1:136:84,52:84:3011:52:1834:-124.377,0,-220.214	0/1:84:74,10:74:2656:10:356:-7.09381,0,-206.792	0/1:100:58,42:58:2076:42:1508:-105.912,0,-150.153	0/1:339:294,45:294:10503:45:1601:-42.3263,0,-816.488	0/1:310:263,47:263:9401:47:1675:-57.7172,0,-729.783	0/1:165:108,53:108:3864:53:1892:-121.732,0,-286.793	0/1:240:84,156:84:2987:156:5547:-427.066,0,-186.752	0/1:275:246,29:246:8788:29:1031:-10.3185,0,-683.918	0/1:210:112,98:112:4020:98:3498:-251.775,0,-286.89	0/1:653:462,191:462:16575:191:6810:-416.386,0,-1242.28	0/1:523:259,264:259:9299:264:9356:-684.565,0,-649.101	0/1:77:58,19:58:2075:19:684:-38.711,0,-157.842	0/1:498:216,282:216:7750:282:10080:-757.164,0,-520.799	0/1:415:316,99:316:11351:99:3519:-191.99,0,-854.851	0/1:298:230,67:230:8268:67:2362:-122.978,0,-635.814	0/1:10:8,2:8:288:2:72:-3.82642,0,-22.3988	0/1:52:10,42:10:360:42:1495:-119.189,0,-15.633	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.07246	0/1:9:8,1:8:284:1:32:-0.490043,0,-23.0859	0/1:25:6,19:6:216:19:672:-53.2811,0,-11.2274	0/1:473:284,189:284:10196:189:6739:-464.193,0,-741.109	0/1:231:200,31:200:7179:31:1103:-30.041,0,-554.232	0/1:120:95,25:95:3412:25:891:-44.3834,0,-261.747	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.27658	0/1:457:378,79:378:13566:79:2832:-117.541,0,-1037.61	0/1:91:59,32:59:2124:32:1150:-76.4097,0,-156.083	0/1:260:120,140:120:4299:140:4966:-368.81,0,-292.73	0/1:164:115,49:115:4107:49:1738:-107.305,0,-304.724	0/1:116:96,20:96:3439:20:716:-29.8482,0,-266.401	0/1:260:162,98:162:5784:98:3498:-236.754,0,-422.39	0/1:241:204,37:204:7320:37:1328:-47.274,0,-569.313	0/1:342:225,117:225:8073:117:4183:-273.483,0,-596.058	0/1:227:186,41:186:6692:41:1472:-64.4423,0,-513.366	0/1:283:169,114:169:6059:114:4083:-282.457,0,-438.617	0/1:326:271,55:271:9736:55:1944:-77.0951,0,-744.936	0/1:24:16,8:16:563:8:288:-18.9555,0,-43.155	0/1:266:163,103:163:5844:103:3678:-251.13,0,-425.4	0/1:115:37,78:37:1319:78:2800:-217.602,0,-80.6169	0/1:32:28,4:28:1008:4:144:-3.68066,0,-78.7474	0/1:196:163,33:163:5852:33:1184:-47.8664,0,-453.521	0/1:71:45,26:45:1620:26:915:-61.2907,0,-119.822	0/0:10:10,0:10:356:0:0:0,-3.0103,-31.6323	0/0:272:259,13:259:9258:13:468:0,-39.4205,-761.831	0/1:206:69,137:69:2476:137:4865:-375.99,0,-152.156	0/1:239:176,63:176:6305:63:2251:-130.905,0,-482.95	0/1:15:6,9:6:216:9:316:-24.2625,0,-14.6284	0/1:427:232,195:232:8299:195:6969:-498.645,0,-591.334	0/1:377:339,38:339:12114:38:1360:-9.21229,0,-937.801	0/1:127:97,30:97:3471:30:1062:-57.6589,0,-263.805	0/1:116:81,35:81:2904:35:1238:-76.7704,0,-216.013	0/0:194:184,10:184:6594:10:356:0,-26.0186,-542.97	0/1:145:96,49:96:3414:49:1723:-111.701,0,-252.33	0/1:102:28,74:28:1008:74:2626:-205.877,0,-56.4831	0/1:163:123,40:123:4377:40:1432:-79.979,0,-327.885	0/1:147:125,22:125:4470:22:788:-26.991,0,-346.986	0/1:62:14,48:14:504:48:1710:-135.52,0,-25.541	0/1:207:114,93:114:4085:93:3297:-233.525,0,-286.157	0/1:158:136,22:136:4872:22:778:-22.777,0,-378.311	0/1:402:171,231:171:6097:231:8169:-614.121,0,-408.439	0/1:236:141,95:141:5068:95:3404:-235.529,0,-369.876	0/1:361:203,158:203:7252:158:5626:-397.772,0,-519.352	0/1:290:175,115:175:6276:115:4095:-281.434,0,-456.695	0/1:17:10,7:10:360:7:252:-17.8241,0,-26.5568	0/1:241:167,73:167:6004:73:2606:-162.173,0,-449.27	0/1:200:146,54:146:5231:54:1923:-113.102,0,-400.576	0/1:502:348,154:348:12487:154:5494:-343.042,0,-927.2	0/1:160:111,49:111:3980:49:1747:-109.348,0,-297.405	0/1:113:58,55:58:2080:55:1966:-143.188,0,-147.086	0/1:124:110,14:110:3951:14:496:-7.64654,0,-308.689	0/1:296:189,107:189:6741:107:3755:-249.037,0,-495.475	0/1:88:70,18:70:2508:18:648:-32.0738,0,-192.011	0/1:215:126,89:126:4503:89:3142:-218.281,0,-325.485	0/1:144:63,81:63:2268:81:2888:-216.804,0,-152.818	0/1:81:16,65:16:576:65:2320:-184.673,0,-26.0867	0/1:211:147,64:147:5260:64:2268:-140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chr02	11166593	.	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chr02	11166605	.	T	C	64761.6	PASS	AB=0.479509;ABP=33.0008;AC=30;AF=0.159574;AN=188;AO=3972;CIGAR=1X;DP=22622;DPB=22622;DPRA=1.95043;EPP=8628.1;EPPR=40459.7;GTI=1;LEN=1;MEANALT=1.20455;MQM=53.1078;MQMR=53.1915;NS=94;NUMALT=1;ODDS=4.76275;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141294;QR=665228;RO=18631;RPL=3972;RPP=8628.1;RPPR=40459.7;RPR=0;RUN=1;SAF=3972;SAP=8628.1;SAR=0;SRF=18631;SRP=40459.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:54:54,0:54:1940:0:0:0,-16.2556,-172.895	0/0:61:61,0:61:2184:0:0:0,-18.3628,-195.688	0/0:139:139,0:139:4938:0:0:0,-41.8432,-441.166	0/0:207:207,0:207:7393:0:0:0,-62.3132,-663.431	0/1:57:36,21:36:1296:21:748:-50.3937,0,-99.2462	0/1:27:4,23:4:144:23:813:-64.4232,0,-5.15234	0/0:59:59,0:59:2085:0:0:0,-17.7608,-187.187	0/0:136:136,0:136:4864:0:0:0,-40.9401,-435.708	0/0:93:93,0:93:3320:0:0:0,-27.9958,-295.899	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.206	0/0:398:397,1:397:14101:1:36:0,-116.307,-1260.86	0/0:86:86,0:86:3061:0:0:0,-25.8886,-274.417	0/0:74:74,0:74:2614:0:0:0,-22.2762,-233.781	0/1:80:36,44:36:1283:44:1566:-116.541,0,-91.3794	0/1:65:37,28:37:1309:28:999:-70.3282,0,-98.4344	0/1:61:26,35:26:910:35:1251:-94.1234,0,-63.7449	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.3481	0/1:29:19,10:19:680:10:356:-23.5717,0,-52.6403	0/0:144:144,0:144:5103:0:0:0,-43.3483,-455.434	0/1:169:79,90:79:2840:90:3232:-239.79,0,-204.369	0/1:99:56,43:56:2004:43:1540:-108.645,0,-149.285	0/0:162:162,0:162:5781:0:0:0,-48.7669,-519.936	0/0:100:100,0:100:3576:0:0:0,-30.103,-321.342	0/1:47:24,23:24:860:23:824:-60.228,0,-63.2938	0/0:89:88,0:88:3135:0:0:0,-26.4906,-281.567	0/0:163:163,0:163:5830:0:0:0,-49.0679,-523.952	0/0:239:239,0:239:8579:0:0:0,-71.9462,-770.203	0/0:19:19,0:19:675:0:0:0,-5.71957,-60.7212	0/0:274:272,2:272:9674:2:72:0,-75.6474,-862.192	0/0:81:81,0:81:2876:0:0:0,-24.3834,-258.29	0/1:75:35,40:35:1251:40:1424:-105.474,0,-90.1073	0/0:1035:1032,2:1032:36959:2:72:0,-304.715,-3305.56	0/0:1167:1159,6:1159:41374:6:216:0,-331.889,-3690.05	0/0:652:651,0:651:23250:0:0:0,-195.971,-2072.79	0/1:1997:1069,924:1069:38204:924:32748:-2326.7,0,-2815.8	0/0:1443:1442,0:1442:51509:0:0:0,-434.085,-4602.82	0/0:172:172,0:172:6142:0:0:0,-51.7772,-552.096	0/0:157:157,0:157:5591:0:0:0,-47.2617,-499.863	0/1:310:147,163:147:5234:163:5761:-422.443,0,-373.934	0/1:552:290,262:290:10331:262:9318:-669.204,0,-759.309	0/0:132:131,0:131:4689:0:0:0,-39.4349,-419.694	0/0:188:188,0:188:6652:0:0:0,-56.5936,-596.372	0/0:232:232,0:232:8297:0:0:0,-69.839,-743.373	0/0:46:46,0:46:1647:0:0:0,-13.8474,-147.954	0/1:46:20,26:20:712:26:917:-68.5394,0,-50.5082	0/0:123:123,0:123:4420:0:0:0,-37.0267,-395.736	0/1:108:48,60:48:1724:60:2135:-158.709,0,-121.031	0/0:177:176,1:176:6279:1:36:0,-49.6866,-559.913	0/0:90:90,0:90:3166:0:0:0,-27.0927,-282.621	0/0:142:141,1:141:5033:1:36:0,-39.1506,-448.577	0/0:153:153,0:153:5442:0:0:0,-46.0576,-488.788	0/1:766:404,360:404:14429:360:12822:-920.121,0,-1064.48	0/0:146:146,0:146:5252:0:0:0,-43.9504,-471.081	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.773	0/1:487:239,247:239:8562:247:8785:-638.538,0,-620.141	0/1:177:90,87:90:3223:87:3077:-223.344,0,-235.259	0/0:68:68,0:68:2431:0:0:0,-20.47,-218.519	0/1:728:394,333:394:14136:333:11919:-850.599,0,-1049.05	0/1:598:334,264:334:11896:264:9357:-659.953,0,-888.3	0/0:68:68,0:68:2425:0:0:0,-20.47,-217.864	0/1:93:52,41:52:1856:41:1449:-102.523,0,-138.297	0/0:710:710,0:710:25396:0:0:0,-213.731,-2276.12	0/0:66:64,1:64:2280:1:36:0,-16.2987,-201.495	0/1:151:77,74:77:2746:74:2656:-192.141,0,-201.009	0/0:46:44,2:44:1569:2:72:0,-7.02035,-134.169	0/0:102:102,0:102:3635:0:0:0,-30.7051,-326.295	0/1:164:95,69:95:3394:69:2457:-171.047,0,-255.592	0/0:181:178,3:178:6388:3:108:0,-44.4185,-564.15	0/0:488:487,0:487:17375:0:0:0,-146.602,-1555.97	0/0:46:46,0:46:1633:0:0:0,-13.8474,-146.52	0/1:38:21,17:21:748:17:612:-43.3045,0,-56.1303	0/0:788:782,6:782:27944:6:216:0,-217.532,-2488.15	0/0:167:167,0:167:5929:0:0:0,-50.272,-530.69	0/1:61:28,33:28:1000:33:1188:-87.2959,0,-70.7609	0/0:184:183,0:183:6546:0:0:0,-55.0885,-586.064	0/0:161:161,0:161:5752:0:0:0,-48.4658,-516.857	0/0:176:176,0:176:6308:0:0:0,-52.9813,-563.049	0/0:93:93,0:93:3316:0:0:0,-27.9958,-297.388	0/0:1227:1226,1:1226:43785:1:36:0,-365.976,-3911.93	0/0:111:110,1:110:3935:1:36:0,-29.8212,-349.103	0/1:137:69,68:69:2443:68:2427:-176.639,0,-177.761	0/0:184:184,0:184:6611:0:0:0,-55.3895,-593.167	0/0:42:42,0:42:1503:0:0:0,-12.6433,-135.368	0/0:54:54,0:54:1931:0:0:0,-16.2556,-173.774	0/1:29:9,20:9:320:20:720:-56.2564,0,-20.3079	0/0:87:87,0:87:3093:0:0:0,-26.1896,-277.112	0/1:22:12,10:12:423:10:360:-26.0393,0,-31.5804	0/0:67:67,0:67:2396:0:0:0,-20.169,-214.953	0/0:54:53,1:53:1878:1:36:0,-12.6664,-165.165	0/0:405:404,1:404:14381:1:36:0,-118.463,-1282.95	0/1:991:508,482:508:18079:482:17149:-1237.92,0,-1321.69	0/1:59:13,46:13:468:46:1640:-129.688,0,-24.666	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5401	0/0:60:60,0:60:2160:0:0:0,-18.0618,-194.232
chr02	11317950	.	C	T	13226.5	PASS	AB=0.198401;ABP=6920.21;AC=64;AF=0.340426;AN=188;AO=1967;CIGAR=1X;DP=13374;DPB=13374;DPRA=3.58441;EPP=3942.26;EPPR=24764.3;GTI=30;LEN=1;MEANALT=1;MQM=57.6909;MQMR=31.0505;NS=94;NUMALT=1;ODDS=0.965276;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70194;QR=407450;RO=11407;RPL=40;RPP=3933.93;RPPR=24764.3;RPR=1927;RUN=1;SAF=1966;SAP=4265.62;SAR=1;SRF=11407;SRP=24773;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:40:40,0:40:1428:0:0:0,-12.0412,-108.357	0/1:164:144,20:144:5152:20:720:-15.7589,0,-343.417	0/1:162:135,27:135:4804:27:968:-38.6255,0,-318.914	0/1:308:257,51:257:9184:51:1824:-71.6848,0,-594.554	0/0:87:79,8:79:2827:8:288:0,-0.954576,-186.638	0/0:115:110,5:110:3943:5:180:0,-18.1131,-285.356	0/0:301:288,13:288:10303:13:468:0,-48.1596,-728.288	0/0:172:167,5:167:5968:5:180:0,-35.2251,-438.588	0/0:135:129,6:129:4619:6:215:0,-22.8705,-335.286	0/1:188:162,26:162:5796:26:928:-27.1599,0,-376.233	0/1:158:114,44:114:4031:44:1576:-94.3612,0,-255.241	0/1:96:83,13:83:2963:13:449:-11.2294,0,-197.79	0/1:118:102,16:102:3630:16:576:-16.1156,0,-242.986	0/0:97:93,4:93:3310:4:143:0,-16.4817,-235.082	0/1:98:83,15:83:2980:15:536:-18.4342,0,-193.073	0/0:92:88,4:88:3139:4:144:0,-14.5602,-223.496	0/1:95:81,14:81:2892:14:500:-16.6932,0,-193.196	0/1:101:90,11:90:3206:11:392:-4.18751,0,-214.835	0/1:89:75,14:75:2680:14:496:-18.1356,0,-178.174	0/0:247:225,22:225:8055:22:788:0,-3.68057,-531.286	0/1:195:169,26:169:6047:26:924:-24.3284,0,-394.377	0/1:121:101,20:101:3600:20:720:-28.6224,0,-227.198	0/0:121:116,5:116:4164:5:180:0,-19.8746,-293.872	0/0:174:162,12:162:5799:12:424:0,-13.928,-394.599	0/1:95:75,20:75:2672:20:708:-35.4477,0,-172.547	0/1:393:344,49:344:12295:49:1721:-36.8548,0,-780.47	0/1:325:278,47:278:9922:47:1671:-52.8341,0,-647.341	0/0:64:60,4:60:2148:4:144:0,-5.9523,-147.754	0/0:423:402,21:402:14350:21:756:0,-58.9794,-979.948	0/1:180:158,22:158:5645:22:780:-16.3376,0,-367.776	0/0:221:209,12:209:7408:12:428:0,-27.7337,-518.194	0/1:25:11,14:11:392:14:492:-36.9768,0,-22.1557	0/1:52:20,32:20:711:32:1140:-87.1649,0,-38.0697	0/1:42:8,34:8:284:34:1224:-97.6872,0,-10.0092	0/1:59:12,47:12:424:47:1663:-127.977,0,-15.1502	0/1:32:20,12:20:705:12:428:-29.2258,0,-45.2076	0/1:349:264,85:264:9433:85:3044:-169.097,0,-581.774	0/0:166:161,5:161:5763:5:180:0,-33.4189,-414.227	0/0:134:129,5:129:4593:5:180:0,-23.9798,-335.027	0/1:12:7,5:7:244:5:180:-12.6751,0,-15.2668	0/1:225:202,23:202:7228:23:804:-4.9395,0,-472.152	0/1:76:65,11:65:2328:11:388:-10.2526,0,-151.26	0/0:142:135,7:135:4810:7:252:0,-19.7173,-338.385	0/1:134:119,15:119:4234:15:540:-8.59033,0,-277.101	0/1:105:86,19:86:3088:19:669:-28.9104,0,-198.55	0/1:146:90,56:90:3216:56:1997:-136.02,0,-191.68	0/1:163:147,16:147:5267:16:576:-3.062,0,-352.49	0/1:226:204,22:204:7284:22:788:-2.66634,0,-476.066	0/0:156:150,6:150:5362:6:201:0,-28.5478,-381.374	0/1:122:89,33:89:3200:33:1188:-70.4065,0,-202.209	0/0:237:222,15:222:7934:15:536:0,-22.7797,-530.551	0/1:19:15,4:15:536:4:144:-7.43124,0,-34.8817	0/0:208:196,12:196:7036:12:428:0,-23.8006,-497.873	0/1:84:66,18:66:2372:18:644:-32.9477,0,-146.974	0/1:22:16,6:16:572:6:216:-13.1679,0,-37.5273	0/0:136:129,7:129:4620:7:252:0,-18.0691,-323.026	0/0:77:70,7:70:2508:7:248:0,-0.518746,-164.712	0/1:22:4,18:4:144:18:636:-50.2152,0,-4.11757	0/1:34:27,7:27:943:7:248:-12.4242,0,-59.8536	0/0:127:122,5:122:4348:5:176:0,-22.0474,-309.597	0/1:200:176,24:176:6275:24:864:-17.8608,0,-408.563	0/1:22:6,16:6:216:16:572:-45.181,0,-10.0632	0/1:173:155,18:155:5536:18:648:-6.5259,0,-352.871	0/1:224:198,26:198:7077:26:908:-14.4919,0,-462.16	0/1:117:106,11:106:3796:11:396:-0.762241,0,-248.621	0/0:95:90,5:90:3219:5:180:0,-12.0494,-224.302	0/1:211:177,34:177:6326:34:1220:-46.1295,0,-409.514	0/0:127:117,10:117:4171:10:356:0,-5.85592,-280.153	0/1:77:57,20:57:2031:20:720:-41.9029,0,-128.591	0/0:117:113,4:113:4038:4:144:0,-21.9078,-295.545	0/1:207:175,32:175:6268:32:1136:-35.0397,0,-395.23	0/1:80:28,52:28:1008:52:1835:-141.192,0,-51.8324	0/1:165:142,23:142:5042:23:824:-24.6736,0,-336.978	0/1:75:68,7:68:2428:7:248:-0.0869451,0,-163.965	0/0:301:289,12:289:10285:12:432:0,-51.3888,-730.181	0/1:167:105,62:105:3772:62:2216:-148.959,0,-231.598	0/0:121:117,4:117:4187:4:140:0,-24.03,-308.263	0/1:64:57,7:57:2035:7:252:-3.76304,0,-136.705	0/1:42:22,20:22:780:20:699:-50.097,0,-47.7203	0/1:89:71,18:71:2528:18:648:-31.7737,0,-162.871	0/0:115:112,3:112:4003:3:108:0,-24.5433,-295.448	0/1:404:326,78:326:11682:78:2794:-129.682,0,-751.286	0/1:182:136,46:136:4846:46:1652:-93.3975,0,-307.371	0/1:126:90,36:90:3198:36:1296:-78.8023,0,-202.393	0/1:102:89,13:89:3192:13:462:-9.83942,0,-207.525	0/1:242:151,91:151:5407:91:3252:-219.836,0,-328.963	0/0:71:69,2:69:2472:2:72:0,-14.5364,-182.127	0/1:132:105,27:105:3746:27:964:-47.2959,0,-247.192	0/1:116:86,30:86:3080:30:1076:-62.0427,0,-200.916	0/1:96:84,12:84:3012:12:424:-9.55078,0,-196.518	0/1:170:140,30:140:5003:30:1076:-45.8869,0,-322.061	0/1:94:78,16:78:2743:16:572:-23.3483,0,-177.421	0/1:160:123,37:123:4394:37:1324:-71.2797,0,-281.241	0/1:183:144,39:144:5115:39:1395:-70.6773,0,-327.884
chr02	11317964	.	GGAGAACA	TGAAAACG,GGAAAACA	212726	PASS	AB=0.798004,0.197752;ABP=6727.75,6920.66;AC=125,63;AF=0.664894,0.335106;AN=188;AO=11500,1963;CIGAR=1X2M1X3M1X,3M1X4M;DP=13509;DPB=13508.4;DPRA=0,3.6207;EPP=24818.8,4230.94;EPPR=9.52472;GTI=10;LEN=8,1;MEANALT=2.39362,2.4086;MQM=31.0322,58.1783;MQMR=60;NS=94;NUMALT=2;ODDS=2248.97;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=405270,70115;QR=108;RO=3;RPL=11482,1959;RPP=24818.8,4230.94;RPPR=9.52472;RPR=18,4;RUN=1,1;SAF=11500,1963;SAP=24974.9,4265.61;SAR=0,0;SRF=3;SRP=9.52472;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:40:0,40,0:0:0:40,0:1417,0:-107.954,-12.0412,0,-107.954,-12.0412,-107.954	1/2:168:0,147,21:0:0:147,21:5154,752:-414.073,-61.6837,-17.4323,-352.74,0,-346.419	1/2:164:0,137,27:0:0:137,27:4819,953:-407.789,-77.9105,-36.6694,-330.222,0,-322.095	1/2:313:0,260,52:0:0:260,52:9139,1853:-762.712,-151.055,-72.7873,-611.703,0,-596.05	1/1:87:0,80,7:0:0:80,7:2825,252:-213.073,-24.0824,0,-192.506,-3.16065,-190.399	1/1:115:0,110,5:0:0:110,5:3869,180:-298.871,-33.1133,0,-284.227,-18.1131,-282.722	1/1:305:0,291,14:0:0:291,14:10220,503:-772.243,-87.5997,0,-731.485,-46.4875,-727.27	1/1:174:0,169,5:0:0:169,5:5950,180:-457.203,-50.8741,0,-442.514,-35.8272,-441.009	1/1:136:0,130,5:0:0:130,5:4591,164:-352.791,-39.1339,0,-340.621,-27.0063,-339.116	1/2:192:0,166,26:0:0:166,26:5808,936:-464.959,-76.6477,-26.6767,-388.662,0,-380.835	1/2:160:0,114,46:0:0:114,46:3986,1656:-402.214,-135.216,-100.899,-267.339,0,-253.491	1/2:98:0,84,13:0:0:84,13:2975,460:-240.026,-36.9047,-11.6181,-203.162,0,-199.248	1/2:118:0,103,14:0:0:103,14:3631,504:-289.787,-41.1285,-10.1224,-248.656,0,-244.442	1/1:97:0,92,4:0:0:92,4:3229,139:-243.662,-27.6948,0,-232.63,-16.6288,-231.426	1/2:95:0,84,11:0:0:84,11:2974,396:-230.933,-32.6649,-7.37841,-198.62,0,-195.309	1/1:92:0,89,2:0:0:89,2:3147,72:-238.336,-26.7917,0,-232.46,-20.863,-231.858	1/2:97:0,83,14:0:0:83,14:2936,504:-242.155,-41.4385,-16.453,-201.068,0,-196.853	1/2:101:0,91,10:0:0:91,10:3227,345:-248.331,-28.0982,-0.704474,-220.571,0,-217.561	1/2:89:0,75,14:0:0:75,14:2644,499:-221.931,-41.0145,-18.4372,-181.264,0,-177.05	1/1:252:0,229,22:0:0:229,22:8109,788:-609.653,-68.9359,0,-545.396,-4.53902,-538.773	1/2:196:0,171,24:0:0:171,24:6008,849:-472.304,-69.0619,-17.5858,-403.234,0,-396.009	1/2:127:0,100,26:0:0:100,26:3510,922:-303.56,-74.7559,-44.6529,-228.851,0,-221.024	1/1:124:0,119,5:0:0:119,5:4166,180:-314.869,-35.8226,0,-300.181,-20.7777,-298.676	1/1:174:0,162,11:0:0:162,11:5701,396:-429.269,-48.7669,0,-396.998,-16.4439,-393.687	1/2:97:0,77,20:0:0:77,20:2712,716:-240.662,-58.7471,-35.5678,-182.26,0,-176.24	1/2:402:0,350,49:0:0:350,49:12316,1760:-945.837,-143.565,-38.205,-802.27,0,-787.519	1/2:328:0,282,46:0:0:282,46:9903,1637:-799.411,-133.762,-48.8712,-665.997,0,-652.15	1/1:65:0,61,4:0:0:61,4:2168,144:-162.979,-18.3628,0,-151.226,-6.25333,-150.022	1/1:430:0,408,22:0:0:408,22:14394,792:-1058.82,-122.82,0,-994.2,-57.8486,-987.577	1/2:181:0,157,21:0:0:157,21:5520,752:-430.525,-61.3818,-14.1201,-369.191,0,-362.869	1/1:225:0,214,11:0:0:214,11:7513,396:-567.941,-64.4204,0,-535.634,-31.7565,-532.322	1/2:24:0,11,13:0:0:11,13:393,464:-64.1484,-38.0477,-34.7364,-26.4248,0,-22.5114	1/2:54:0,20,34:0:0:20,34:712,1204:-145.952,-98.3681,-92.3475,-47.9021,0,-37.667	1/2:44:0,7,37:0:0:7,37:251,1332:-126.008,-108.908,-106.8,-17.4136,0,-6.27549	1/2:43:0,12,31:0:0:12,31:415,1116:-120.06,-91.4189,-87.8065,-28.9567,0,-19.6248	1/2:32:0,19,12:0:0:19,12:666,432:-81.0915,-35.2536,-29.534,-45.8217,0,-42.2093	1/2:355:0,265,90:0:0:265,90:9365,3236:-870.517,-264.262,-184.489,-606.595,0,-579.503	1/1:168:0,162,6:0:0:162,6:5720,212:-430.828,-48.7669,0,-413.56,-31.1482,-411.754	1/1:136:0,131,4:0:0:131,4:4629,144:-355.471,-39.4349,0,-343.72,-27.6293,-342.516	1/2:10:0,7,3:0:0:7,3:249,108:-25.7875,-9.17208,-7.06487,-16.9566,0,-16.0536	1/2:226:0,201,24:0:0:201,24:7109,864:-544.626,-70.5969,-10.0899,-474.165,0,-466.941	1/2:76:0,65,11:0:0:65,11:2286,372:-182.489,-29.6268,-10.0599,-153.187,0,-149.876	1/1:146:0,139,7:0:0:139,7:4877,237:-369.817,-41.8432,0,-350.602,-22.2913,-348.495	1/2:135:0,121,14:0:0:121,14:4276,500:-326.343,-41.1138,-4.68917,-285.579,0,-281.365	1/2:106:0,87,19:0:0:87,19:3071,684:-260.553,-56.0719,-29.8823,-204.829,0,-199.11	1/2:147:0,90,56:0:0:90,56:3178,2008:-370.497,-163.787,-136.694,-206.725,0,-189.867	1/2:165:0,148,16:0:0:148,16:5226,572:-403.543,-46.6419,-2.08951,-356.898,0,-352.081	1/2:227:0,205,22:0:0:205,22:7213,782:-545.078,-63.6919,-1.9807,-481.733,0,-475.111	1/1:155:0,149,6:0:0:149,6:5258,216:-395.805,-44.8535,0,-378.183,-26.8742,-376.377	1/2:122:0,89,33:0:0:89,33:3124,1184:-306.366,-96.8384,-70.0467,-209.869,0,-199.935	1/1:238:0,221,16:0:0:221,16:7839,561:-575.339,-66.5276,0,-529.696,-20.7879,-524.88	1/2:20:0,16,4:0:0:16,4:568,144:-50.1368,-12.1078,-7.29137,-38.3763,0,-37.1722	1/1:209:0,197,12:0:0:197,12:6970,432:-535.226,-59.3029,0,-500.018,-23.7393,-496.406	1/2:84:0,66,18:0:0:66,18:2334,644:-203.905,-52.8157,-32.9477,-151.432,0,-146.014	1/2:22:0,16,6:0:0:16,6:557,216:-56.4628,-17.9843,-13.1679,-38.8222,0,-37.016	1/1:137:0,130,7:0:0:130,7:4598,252:-346.463,-39.1339,0,-326.053,-18.3702,-323.946	1/1:77:0,70,7:0:0:70,7:2446,252:-184.735,-21.0721,0,-164.171,-0.154227,-162.064	1/2:20:0,4,16:0:0:4,16:143,568:-55.5675,-46.354,-45.1499,-9.51577,0,-4.69929	1/2:34:0,27,7:0:0:27,7:956,244:-82.2863,-20.1878,-12.06,-62.4347,0,-60.3275	1/1:128:0,123,5:0:0:123,5:4293,180:-325.116,-37.0267,0,-310.428,-21.9813,-308.923	1/2:201:0,175,25:0:0:175,25:6163,896:-483.761,-73.1186,-20.4384,-410.692,0,-403.167	1/2:22:0,6,16:0:0:6,16:210,576:-61.6409,-47.3485,-45.5423,-14.6076,0,-9.79109	1/2:174:0,155,19:0:0:155,19:5476,684:-412.513,-56.123,-9.46333,-356.741,0,-351.022	1/2:225:0,199,24:0:0:199,24:7034,849:-538.948,-69.0224,-9.11744,-469.95,0,-462.726	1/1:120:0,109,11:0:0:109,11:3795,396:-287.994,-32.8123,0,-255.676,-0.140851,-252.365	1/1:96:0,90,6:0:0:90,6:3188,216:-239.837,-27.0927,0,-222.213,-9.11287,-220.407	1/2:212:0,179,32:0:0:179,32:6305,1140:-513.945,-92.6923,-38.808,-421.246,0,-411.614	1/1:127:0,117,10:0:0:117,10:4119,356:-310.484,-35.2205,0,-281.47,-5.85562,-278.46	1/2:77:3,57,17:3:108:57,17:1995,612:-173.083,-41.0772,-32.7308,-124.081,0,-127.779	1/1:118:0,114,4:0:0:114,4:4018,144:-309.263,-34.3174,0,-297.513,-22.2089,-296.308	1/2:208:0,174,33:0:0:174,33:6130,1136:-488.011,-89.5351,-37.1558,-398.452,0,-388.518	1/2:84:0,28,55:0:0:28,55:970,1972:-226.163,-160.741,-152.312,-65.3859,0,-48.8293	1/2:167:0,141,23:0:0:141,23:4960,828:-407.303,-67.533,-25.0877,-339.804,0,-332.88	1/2:76:0,69,7:0:0:69,7:2443,252:-188.345,-20.9217,-0.150679,-167.778,0,-165.671	1/1:307:0,294,12:0:0:294,12:10371,428:-779.062,-88.5028,0,-744.169,-53.5514,-740.557	1/2:172:0,110,59:0:0:110,59:3882,2067:-427.901,-168.086,-134.972,-259.803,0,-242.042	1/1:124:0,120,3:0:0:120,3:4220,104:-326.002,-36.1236,0,-317.818,-27.8749,-316.915	1/2:66:0,59,7:0:0:59,7:2074,252:-163.228,-20.9217,-3.16098,-142.66,0,-140.552	1/2:43:0,22,21:0:0:22,21:785,748:-114.674,-61.0511,-54.4285,-53.9529,0,-47.6313	1/2:90:0,71,19:0:0:71,19:2499,676:-222.376,-55.3619,-33.9888,-167.357,0,-161.637	1/1:119:0,114,5:0:0:114,5:4011,180:-308.93,-34.3174,0,-294.241,-19.2705,-292.736	1/2:408:0,328,80:0:0:328,80:11638,2853:-1008.65,-232.497,-133.76,-776.495,0,-752.413	1/2:182:0,135,46:0:0:135,46:4769,1650:-451.84,-134.223,-93.584,-317.668,0,-303.821	1/2:129:0,91,38:0:0:91,38:3200,1364:-325.719,-111.409,-84.015,-214.65,0,-203.211	1/2:104:0,91,13:0:0:91,13:3210,452:-250.563,-36.2728,-8.87911,-214.625,0,-210.712	1/2:245:0,150,92:0:0:150,92:5262,3308:-621.365,-269.8,-224.646,-351.592,0,-323.897	1/1:70:0,69,1:0:0:69,1:2437,36:-187.449,-20.7711,0,-184.511,-17.4738,-184.21	1/2:135:0,106,29:0:0:106,29:3739,1040:-340.583,-85.1395,-53.2304,-255.789,0,-247.059	1/2:117:0,86,31:0:0:86,31:3039,1116:-298.674,-91.4189,-65.5303,-207.599,0,-198.267	1/2:97:0,85,12:0:0:85,12:3018,432:-236.706,-35.5621,-9.97453,-201.496,0,-197.883	1/2:169:0,138,30:0:0:138,30:4876,1076:-413.414,-87.7988,-46.2567,-325.73,0,-316.699	1/2:94:0,78,16:0:0:78,16:2697,568:-226.957,-46.6239,-23.1436,-180.677,0,-175.86	1/2:164:0,125,39:0:0:125,39:4431,1400:-410.502,-114.54,-76.9113,-296.306,0,-284.566	1/2:185:0,142,41:0:0:142,41:5023,1468:-454.545,-119.737,-76.9903,-334.899,0,-322.557
chr02	11317977	.	A	T,G	210070	PASS	AB=0.79899,0.198191;ABP=6612.35,6737.6;AC=126,62;AF=0.670213,0.329787;AN=188;AO=11389,1928;CIGAR=1X,1X;DP=13356;DPB=13356;DPRA=0,3.57957;EPP=24733.9,4189.61;EPPR=61.6401;GTI=10;LEN=1,1;MEANALT=2.08511,2.09677;MQM=31.0353,58.4544;MQMR=32.0741;NS=94;NUMALT=2;ODDS=2064.2;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=407364,68215;QR=963;RO=27;RPL=11389,1928;RPP=24733.9,4189.61;RPPR=61.6401;RPR=0,0;RUN=1,1;SAF=11389,1928;SAP=24733.9,4189.61;SAR=0,0;SRF=27;SRP=61.6401;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:40:0,40,0:0:0:40,0:1440,0:-108.699,-12.0412,0,-108.699,-12.0412,-108.699	1/2:167:0,146,21:0:0:146,21:5222,752:-415.337,-61.6837,-17.7333,-354.004,0,-347.682	1/2:163:0,135,28:0:0:135,28:4848,986:-409.144,-80.5784,-39.9393,-328.909,0,-320.48	1/2:311:0,259,52:0:0:259,52:9253,1847:-764.189,-150.817,-72.8507,-613.717,0,-598.063	1/1:87:0,80,7:0:0:80,7:2848,252:-213.329,-24.0824,0,-192.762,-3.16065,-190.655	1/1:113:0,107,5:0:0:107,5:3848,180:-293.833,-32.2102,0,-279.189,-17.5243,-277.684	1/1:300:0,286,14:0:0:286,14:10228,496:-764.169,-86.0946,0,-723.927,-45.5028,-719.713	1/1:169:0,164,5:0:0:164,5:5866,180:-446.203,-49.3689,0,-431.515,-34.322,-430.009	1/1:137:4,131,2:4:135:131,2:4708,72:-348.338,-30.1132,0,-343.666,-33.538,-352.43	1/2:189:0,163,26:0:0:163,26:5812,915:-458.521,-74.7562,-25.6884,-384.108,0,-376.282	1/2:158:0,113,45:0:0:113,45:4011,1593:-396.18,-129.961,-95.9443,-266.556,0,-253.01	1/2:96:1,83,12:1:36:83,12:2975,415:-232.941,-30.9263,-8.38609,-199.9,0,-198.736	1/2:117:0,101,15:0:0:101,15:3614,523:-288.208,-42.5298,-12.1257,-245.713,0,-241.197	1/1:97:1,93,3:1:36:93,3:3344,108:-246.089,-25.6296,0,-237.576,-19.1372,-239.055	1/2:94:0,83,11:0:0:83,11:2980,396:-229.9,-32.6649,-7.67944,-197.588,0,-194.277	1/1:90:0,87,3:0:0:87,3:3115,108:-234.079,-26.1896,0,-225.309,-17.064,-224.406	1/2:97:0,83,14:0:0:83,14:2967,502:-242.886,-41.2737,-16.2882,-201.963,0,-197.749	1/1:101:1,91,9:1:36:91,9:3237,320:-245.442,-25.4854,0,-219.661,-1.21821,-218.87	1/2:86:0,72,14:0:0:72,14:2584,496:-215.868,-40.7134,-19.0393,-175.501,0,-171.286	1/1:249:0,228,20:0:0:228,20:8183,709:-609.71,-68.6348,0,-552.045,-10.921,-546.024	1/2:192:0,167,25:0:0:167,25:5965,879:-468.232,-71.7697,-21.4976,-396.806,0,-389.281	1/2:127:1,101,25:1:36:101,25:3623,877:-301.212,-68.1437,-40.6775,-230.409,0,-225.822	1/1:123:0,118,5:0:0:118,5:4240,180:-315.552,-35.5215,0,-300.864,-20.4767,-299.359	1/1:174:0,158,12:0:0:158,12:5671,428:-422.921,-47.5627,0,-388.072,-12.6611,-384.46	1/2:95:0,76,19:0:0:76,19:2715,671:-235.646,-54.9962,-32.1179,-180.992,0,-175.272	1/2:395:0,348,47:0:0:348,47:12443,1676:-941.188,-136.965,-32.2064,-804.572,0,-790.424	1/2:325:0,279,46:0:0:279,46:9925,1644:-796.007,-134.394,-50.4061,-661.962,0,-648.115	1/1:65:0,61,4:0:0:61,4:2196,144:-163.777,-18.3628,0,-152.024,-6.25333,-150.82	1/1:423:0,400,22:0:0:400,22:14323,765:-1042.8,-120.412,0,-980.605,-58.1688,-973.982	1/2:180:0,157,23:0:0:157,23:5637,828:-440.672,-67.9204,-20.6587,-373.104,0,-366.18	1/1:222:1,211,10:1:36:211,10:7535,356:-559.609,-60.636,0,-530.899,-34.5066,-530.77	1/2:25:0,11,14:0:0:11,14:396,489:-66.204,-40.0318,-36.7204,-26.4924,0,-22.2779	1/2:53:0,20,33:0:0:20,33:720,1180:-144.294,-96.4833,-90.4627,-48.1313,0,-38.1973	1/2:42:0,7,35:0:0:7,35:243,1243:-118.203,-101.502,-99.3946,-17.0088,0,-6.47272	1/2:42:0,11,31:0:0:11,31:381,1108:-116.706,-90.6987,-87.3874,-26.3198,0,-16.9879	1/2:31:0,20,11:0:0:20,11:720,392:-81.6832,-32.3087,-26.2881,-49.7136,0,-46.4022	1/2:349:0,263,86:0:0:263,86:9386,3050:-852.712,-248.81,-169.639,-604.24,0,-578.352	1/1:167:0,159,8:0:0:159,8:5711,284:-425.713,-47.8638,0,-403.126,-24.9321,-400.718	1/1:135:0,131,4:0:0:131,4:4671,140:-356.319,-39.4349,0,-344.927,-27.6945,-343.723	1/2:10:0,7,3:0:0:7,3:252,108:-25.8675,-9.17208,-7.06487,-17.0371,0,-16.134	1/2:222:0,198,24:0:0:198,24:7100,864:-539.944,-70.8129,-11.2089,-469.484,0,-462.26	1/2:75:3,63,8:3:108:63,8:2256,274:-164.479,-15.8171,-3.28074,-143.174,0,-147.209	1/1:144:0,137,7:0:0:137,7:4861,243:-365.284,-41.2411,0,-345.528,-21.1408,-343.421	1/2:133:0,119,14:0:0:119,14:4227,489:-320.868,-40.1167,-4.29409,-281.095,0,-276.88	1/2:106:0,87,19:0:0:87,19:3119,680:-261.839,-55.7971,-29.6075,-206.389,0,-200.669	1/2:145:0,90,55:0:0:90,55:3224,1949:-367.279,-159.097,-132.004,-208.512,0,-191.955	1/2:165:0,148,17:0:0:148,17:5298,604:-408.467,-49.528,-4.97558,-359.288,0,-354.171	1/2:228:0,205,23:0:0:205,23:7368,804:-552.186,-65.579,-3.86781,-486.951,0,-480.027	1/1:156:0,150,6:0:0:150,6:5396,216:-400.724,-45.1545,0,-383.102,-27.1752,-381.296	1/2:122:0,88,34:0:0:88,34:3141,1207:-306.955,-98.6048,-72.1142,-208.689,0,-198.454	1/1:237:0,222,15:0:0:222,15:7941,536:-579.086,-66.8287,0,-535.39,-22.7802,-530.875	1/2:19:0,15,4:0:0:15,4:540,140:-47.4191,-11.7391,-7.22361,-36.019,0,-34.8148	1/1:209:0,197,12:0:0:197,12:7062,428:-538.373,-59.3029,0,-503.525,-24.1017,-499.912	1/2:84:0,66,18:0:0:66,18:2361,648:-204.559,-53.1764,-33.3085,-151.727,0,-146.308	1/2:22:0,16,6:0:0:16,6:576,216:-57.1136,-17.9843,-1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chr02	11317983	.	A	G	167412	PASS	AB=0.798441;ABP=6650.76;AC=125;AF=0.664894;AN=188;AO=11325;CIGAR=1X;DP=13298;DPB=13298;DPRA=0;EPP=24594.9;EPPR=4280.81;GTI=30;LEN=1;MEANALT=1.03191;MQM=31.0322;MQMR=58.0203;NS=94;NUMALT=1;ODDS=0.896779;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=403963;QR=69923;RO=1970;RPL=11325;RPP=24594.9;RPPR=4280.81;RPR=0;RUN=1;SAF=11325;SAP=24594.9;SAR=0;SRF=1970;SRP=4280.81;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:39:0,39:0:0:39:1396:-106.036,-11.7402,0	0/1:166:21,145:21:744:145:5134:-342.874,0,-17.3124	0/1:162:28,134:28:991:134:4771:-315.588,0,-40.6917	0/1:307:51,256:51:1785:256:9111:-589.438,0,-68.4803	1/1:86:7,79:7:252:79:2815:-188.701,-2.85962,0	1/1:113:5,108:5:180:108:3855:-279.434,-17.511,0	1/1:301:14,287:14:500:287:10209:-720.494,-45.6023,0	1/1:169:5,164:5:176:164:5871:-431.284,-34.6891,0	1/1:134:6,128:6:216:128:4577:-332.009,-22.5412,0	0/1:190:27,163:27:960:163:5823:-376.84,0,-29.436	0/1:161:48,113:48:1724:113:3936:-248.229,0,-106.714	0/1:95:14,81:14:488:81:2891:-192.859,0,-14.7983	0/1:118:16,102:16:572:102:3622:-242.706,0,-15.754	1/1:95:4,91:4:144:91:3233:-229.387,-15.8554,0	0/1:95:11,84:11:388:84:3012:-196.555,0,-6.65351	1/1:90:4,86:4:144:86:3068:-217.825,-13.8711,0	0/1:96:14,82:14:504:82:2903:-194.049,0,-16.7541	0/1:99:10,89:10:348:89:3184:-213.832,0,-0.823619	0/1:88:14,74:14:500:74:2648:-175.866,0,-18.7986	1/1:248:22,226:22:776:226:8111:-534.957,-5.06291,0	0/1:193:25,168:25:892:168:6000:-391.989,0,-22.3695	0/1:124:25,99:25:874:99:3556:-221.725,0,-41.4664	1/1:121:5,116:5:180:116:4147:-293.264,-19.8746,0	1/1:175:12,163:12:428:163:5824:-396.227,-13.8666,0	0/1:94:19,75:19:684:75:2675:-172.728,0,-33.5935	0/1:394:48,345:48:1695:345:12307:-781.395,0,-34.2256	0/1:327:47,280:47:1667:280:10027:-653.385,0,-51.8721	1/1:65:4,61:4:144:61:2179:-150.168,-6.25333,0	1/1:422:19,403:19:669:403:14421:-990.435,-66.5111,0	0/1:181:23,158:23:820:158:5655:-368.023,0,-19.6361	1/1:221:11,210:11:388:210:7457:-524.217,-31.2767,0	0/1:24:14,10:14:504:10:360:-19.8963,0,-38.337	0/1:54:34,20:34:1216:20:712:-37.615,0,-93.4002	0/1:42:35,7:35:1231:7:252:-6.90578,0,-98.3583	0/1:43:31,12:31:1089:12:424:-19.9666,0,-85.3721	0/1:32:12,20:12:419:20:716:-45.9606,0,-28.4097	0/1:352:90,262:90:3203:262:9357:-575.363,0,-182.469	1/1:168:6,162:6:208:162:5788:-413.836,-31.514,0	1/1:135:4,131:4:144:131:4677:-343.905,-27.3254,0	0/1:10:3,7:3:104:7:248:-15.9919,0,-6.69251	0/1:221:24,197:24:860:197:7039:-458.939,0,-11.1492	0/1:74:11,63:11:392:63:2256:-146.477,0,-11.1261	1/1:144:7,137:7:252:137:4892:-343.897,-20.3194,0	0/1:134:14,120:14:500:120:4223:-277.605,0,-4.9905	0/1:103:20,83:20:716:83:2955:-190.169,0,-33.6629	0/1:146:56,90:56:1981:90:3220:-191.192,0,-134.582	0/1:162:17,145:17:608:145:5191:-346.937,0,-6.24008	0/1:224:23,201:23:820:201:7167:-468.457,0,-5.88956	1/1:152:6,146:6:212:146:5224:-369.529,-26.3362,0	0/1:121:34,86:34:1220:86:3057:-193.071,0,-73.5871	1/1:232:16,216:16:559:216:7707:-511.744,-19.2821,0	0/1:18:3,15:3:108:15:540:-35.1159,0,-4.65538	1/1:207:12,195:12:428:195:6949:-492.326,-23.4996,0	0/1:84:18,66:18:640:66:2368:-146.871,0,-32.587	0/1:22:6,16:6:216:16:559:-36.9572,0,-13.1679	1/1:135:7,128:7:244:128:4581:-320.608,-18.4976,0	0/1:74:7,67:7:244:67:2404:-157.652,0,-0.0198221	0/1:18:14,4:14:504:4:144:-5.32169,0,-39.7772	0/1:34:7,27:7:248:27:968:-60.6294,0,-12.4242	1/1:124:5,119:5:180:119:4247:-301.594,-20.7772,0	0/1:198:25,173:25:896:173:6170:-401.012,0,-21.3408	0/1:22:16,6:16:576:6:216:-10.0632,0,-45.5423	0/1:173:19,154:19:676:154:5511:-350.944,0,-9.04203	0/1:221:25,196:25:896:196:6999:-457.317,0,-14.2172	1/1:117:10,106:10:356:106:3734:-248.44,-2.84156,0	1/1:94:6,88:6:216:88:3130:-215.133,-8.51081,0	0/1:210:32,178:32:1127:178:6359:-411.733,0,-38.3117	1/1:125:10,115:10:356:115:4094:-274.525,-5.25386,0	0/1:74:20,54:20:711:54:1931:-121.504,0,-41.9928	1/1:114:4,110:4:144:110:3947:-288.142,-21.0047,0	0/1:207:33,174:33:1167:174:6226:-391.853,0,-37.8973	0/1:82:55,27:55:1955:27:959:-47.835,0,-151.343	0/1:165:23,142:23:816:142:5052:-336.975,0,-23.952	1/1:75:7,68:7:244:68:2440:-164.663,-0.277821,0	1/1:296:12,284:12:432:284:10136:-717.1,-49.8837,0	0/1:169:61,108:61:2145:108:3861:-238.312,0,-142.052	1/1:123:4,119:4:144:119:4243:-312.382,-24.3248,0	0/1:64:7,57:7:244:57:2040:-136.906,0,-3.03351	0/1:43:21,22:21:744:22:792:-47.841,0,-53.8477	0/1:89:18,71:18:644:71:2556:-163.777,0,-31.4124	1/1:118:5,113:5:180:113:4022:-291.013,-18.9695,0	0/1:397:76,321:76:2683:321:11497:-739.487,0,-121.787	0/1:181:46,135:46:1635:135:4787:-303.978,0,-92.1695	0/1:125:36,89:36:1271:89:3157:-199.83,0,-76.8529	0/1:102:13,89:13:460:89:3148:-205.747,0,-9.51197	0/1:244:94,150:94:3339:150:5297:-322.024,0,-227.02	1/1:67:1,66:1:36:66:2338:-176.031,-16.5707,0	0/1:132:28,104:28:978:104:3660:-241.513,0,-48.5893	0/1:116:31,85:31:1108:85:3039:-196.897,0,-65.1106	0/1:97:12,85:12:428:85:3036:-198.498,0,-9.61214	0/1:165:30,135:30:1064:135:4804:-309.577,0,-46.3115	0/1:93:16,77:16:568:77:2744:-175.746,0,-23.4452	0/1:160:38,122:38:1329:122:4371:-279.063,0,-71.7262	0/1:182:41,141:41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chr02	12920016	.	G	A	20497.3	PASS	AB=0.380422;ABP=438.2;AC=29;AF=0.154255;AN=188;AO=1342;CIGAR=1X;DP=15368;DPB=15368;DPRA=0.875032;EPP=2917.13;EPPR=30453.6;GTI=4;LEN=1;MEANALT=1;MQM=59.921;MQMR=59.8992;NS=94;NUMALT=1;ODDS=1.57752;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48079;QR=500754;RO=14023;RPL=1301;RPP=2571.88;RPPR=365.974;RPR=41;RUN=1;SAF=1301;SAP=2571.88;SAR=41;SRF=7777;SRP=365.974;SRR=6246;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:139:139,0:139:4958:0:0:0,-41.8432,-446.158	0/0:220:220,0:220:7831:0:0:0,-66.2266,-704.813	0/0:250:250,0:250:8923:0:0:0,-75.2575,-803.017	0/0:279:279,0:279:9967:0:0:0,-83.9874,-896.959	0/1:160:119,41:119:4272:41:1472:-84.6113,0,-336.483	0/1:131:77,54:77:2760:54:1925:-134.091,0,-209.207	0/0:246:246,0:246:8788:0:0:0,-74.0534,-790.906	0/0:322:322,0:322:11465:0:0:0,-96.9317,-1031.66	0/0:247:247,0:247:8839:0:0:0,-74.3544,-795.478	0/0:179:179,0:179:6420:0:0:0,-53.8844,-577.884	0/0:112:112,0:112:4011:0:0:0,-33.7154,-361.092	0/0:169:168,1:168:6000:1:36:0,-47.2758,-536.475	0/0:122:122,0:122:4372:0:0:0,-36.7257,-393.621	0/1:95:67,28:67:2356:28:1008:-62.4385,0,-183.691	0/1:56:34,22:34:1212:22:792:-54.748,0,-92.5286	0/1:50:35,15:35:1243:15:528:-32.7999,0,-97.1132	0/0:148:148,0:148:5281:0:0:0,-44.5524,-475.426	0/1:42:28,14:28:1008:14:504:-33.0548,0,-78.3931	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.384	0/1:250:167,83:167:5950:83:2988:-193.624,0,-460.347	0/1:265:153,112:153:5458:112:4024:-282.574,0,-411.562	0/0:156:156,0:156:5568:0:0:0,-46.9607,-501.24	0/0:217:217,0:217:7767:0:0:0,-65.3235,-699.042	0/1:158:86,72:86:3060:72:2592:-185.961,0,-228.065	0/0:165:164,1:164:5849:1:36:0,-46.0717,-522.852	0/0:616:615,1:615:21984:1:36:0,-181.836,-1974.39	0/0:354:354,0:354:12637:0:0:0,-106.565,-1137.13	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/0:427:427,0:427:15296:0:0:0,-128.54,-1376.34	0/0:234:234,0:234:8347:0:0:0,-70.441,-751.213	0/1:180:124,56:124:4423:56:2012:-127.168,0,-344.036	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5581	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:327:327,0:327:11663:0:0:0,-98.4368,-1049.54	0/0:159:159,0:159:5627:0:0:0,-47.8638,-506.545	0/1:114:80,34:80:2834:34:1220:-75.7894,0,-220.979	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:221:221,0:221:7897:0:0:0,-66.5276,-710.746	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.624	0/0:354:354,0:354:12661:0:0:0,-106.565,-1139.26	0/0:132:132,0:132:4709:0:0:0,-39.736,-423.965	0/1:116:77,39:77:2748:39:1400:-91.3797,0,-212.641	0/0:217:217,0:217:7754:0:0:0,-65.3235,-697.888	0/1:204:117,87:117:4184:87:3132:-220.695,0,-315.332	0/0:269:268,1:268:9572:1:26:0,-78.3772,-858.13	0/0:144:144,0:144:5124:0:0:0,-43.3483,-461.301	0/0:205:205,0:205:7337:0:0:0,-61.7111,-660.36	0/0:264:264,0:264:9452:0:0:0,-79.4719,-850.633	0/1:10:3,7:3:108:7:248:-19.6539,0,-7.06487	0/0:171:171,0:171:6117:0:0:0,-51.4761,-550.604	0/0:102:102,0:102:3656:0:0:0,-30.7051,-329.243	0/1:14:8,6:8:288:6:206:-14.6608,0,-22.053	0/1:163:90,73:90:3236:73:2604:-185.539,0,-242.388	0/0:97:97,0:97:3449:0:0:0,-29.1999,-310.62	0/1:31:15,16:15:523:16:576:-42.8339,0,-38.0665	0/1:27:16,11:16:572:11:388:-27.1255,0,-43.6856	0/0:182:179,0:179:6374:0:0:0,-53.8844,-573.2	0/1:130:72,58:72:2562:58:2075:-147.885,0,-191.696	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:202:200,2:200:7116:2:72:0,-53.9713,-633.601	0/1:293:163,130:163:5832:130:4638:-329.381,0,-436.784	0/0:132:131,1:131:4688:1:36:0,-36.1377,-418.473	0/0:123:123,0:123:4384:0:0:0,-37.0267,-394.729	0/1:216:136,80:136:4852:80:2852:-191.893,0,-371.804	0/0:320:319,1:319:11371:1:36:0,-92.7313,-1019.59	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.653	0/0:153:153,0:153:5500:0:0:0,-46.0576,-495.043	0/1:132:56,76:56:2008:76:2728:-206.006,0,-141.255	0/0:57:57,0:57:2018:0:0:0,-17.1587,-181.889	0/0:211:211,0:211:7506:0:0:0,-63.5173,-675.563	0/1:107:77,30:77:2735:30:1080:-65.303,0,-214.18	0/0:341:341,0:341:12171:0:0:0,-102.651,-1095.21	0/0:204:204,0:204:7280:0:0:0,-61.4101,-655.247	0/0:358:358,0:358:12726:0:0:0,-107.769,-1145.11	0/0:190:189,1:189:6761:1:36:0,-53.5974,-604.931	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:188:188,0:188:6709:0:0:0,-56.5936,-603.872	0/1:199:128,71:128:4577:71:2556:-170.385,0,-352.178	0/0:312:312,0:312:11188:0:0:0,-93.9214,-1006.55	0/0:149:149,0:149:5327:0:0:0,-44.8535,-479.555	0/0:90:90,0:90:3228:0:0:0,-27.0927,-290.739	0/1:101:62,39:62:2220:39:1396:-95.5351,0,-169.658	0/0:262:262,0:262:9367:0:0:0,-78.8699,-842.974	0/1:45:31,14:31:1112:14:489:-30.7925,0,-86.8441	0/0:113:113,0:113:3992:0:0:0,-34.0164,-359.358	0/0:121:121,0:121:4336:0:0:0,-36.4246,-390.398	0/0:71:71,0:71:2540:0:0:0,-21.3731,-228.846	0/1:118:98,20:98:3493:20:716:-29.2462,0,-279.049	0/1:88:44,44:44:1576:44:1580:-116.001,0,-115.641	0/0:240:240,0:240:8563:0:0:0,-72.2472,-770.671	0/0:190:190,0:190:6775:0:0:0,-57.1957,-609.818
chr02	14258367	.	CTACA	ATACA	25519.3	PASS	AB=0.486393;ABP=8.15133;AC=30;AF=0.159574;AN=188;AO=1569;CIGAR=1X4M;DP=11024;DPB=11023.2;DPRA=1.03462;EPP=3410.05;EPPR=20447.4;GTI=2;LEN=1;MEANALT=1.55;MQM=59.9669;MQMR=59.9804;NS=94;NUMALT=1;ODDS=0.0519017;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55614;QR=333508;RO=9415;RPL=0;RPP=3410.05;RPPR=20447.4;RPR=1569;RUN=1;SAF=1569;SAP=3410.05;SAR=0;SRF=9415;SRP=20447.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:28:27,0:27:956:0:0:0,-8.12781,-85.9958	0/0:202:201,0:201:7091:0:0:0,-60.507,-637.901	0/0:70:70,0:70:2482:0:0:0,-21.0721,-223.634	0/0:124:122,1:122:4319:1:36:0,-33.7882,-385.293	0/1:63:26,36:26:925:36:1277:-96.2076,0,-64.5448	0/1:96:45,51:45:1601:51:1764:-130.136,0,-115.48	0/0:151:151,0:151:5366:0:0:0,-45.4555,-483.076	0/0:234:234,0:234:8260:0:0:0,-70.441,-743.424	0/0:60:60,0:60:2150:0:0:0,-18.0618,-193.767	0/0:94:94,0:94:3333:0:0:0,-28.2968,-300.188	0/0:191:188,0:188:6675:0:0:0,-56.5936,-600.474	0/0:124:123,0:123:4383:0:0:0,-37.0267,-394.285	0/0:96:96,0:96:3407:0:0:0,-28.8989,-306.848	0/1:196:105,90:105:3744:90:3232:-231.771,0,-278.101	0/1:79:42,37:42:1497:37:1309:-94.3282,0,-111.244	0/1:86:38,48:38:1345:48:1701:-127.485,0,-95.4617	0/0:196:195,0:195:6937:0:0:0,-58.7008,-624.08	0/1:79:32,47:32:1133:47:1665:-126.354,0,-78.4972	0/0:111:111,0:111:3939:0:0:0,-33.4143,-354.704	0/1:157:70,86:70:2462:86:3074:-229.716,0,-174.663	0/1:143:92,51:92:3252:51:1787:-118.059,0,-249.853	0/0:110:110,0:110:3888:0:0:0,-33.1133,-350.117	0/0:69:69,0:69:2427:0:0:0,-20.7711,-218.688	0/1:86:42,44:42:1496:44:1580:-116.603,0,-109.046	0/0:43:42,0:42:1493:0:0:0,-12.6433,-134.305	0/0:338:337,1:337:11878:1:36:0,-98.1499,-1065.31	0/0:130:129,0:129:4595:0:0:0,-38.8329,-413.506	0/0:53:52,1:52:1832:1:36:0,-12.3573,-161.562	0/0:187:186,0:186:6603:0:0:0,-55.9916,-594.037	0/0:174:172,0:172:6052:0:0:0,-51.7772,-544.434	0/1:118:52,65:52:1832:65:2306:-172.217,0,-129.579	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:30:30,0:30:1074:0:0:0,-9.0309,-96.9728	0/0:10:10,0:10:353:0:0:0,-3.0103,-32.109	0/1:7:4,3:4:129:3:108:-7.96796,0,-9.82143	0/0:19:19,0:19:666:0:0:0,-5.71957,-60.2642	0/0:323:321,1:321:11396:1:36:0,-93.6932,-1021.88	0/0:155:155,0:155:5490:0:0:0,-46.6596,-494.234	0/1:176:95,80:95:3337:80:2834:-202.405,0,-247.658	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:141:140,0:140:4938:0:0:0,-42.1442,-444.217	0/0:78:78,0:78:2766:0:0:0,-23.4803,-249.183	0/0:132:132,0:132:4680:0:0:0,-39.736,-421.363	0/0:97:97,0:97:3450:0:0:0,-29.1999,-310.714	0/1:104:53,49:53:1860:49:1729:-124.824,0,-136.611	0/0:55:54,0:54:1921:0:0:0,-16.2556,-172.807	0/1:103:38,65:38:1358:65:2325:-178.502,0,-91.5146	0/0:185:181,2:181:6389:2:72:0,-48.6116,-568.273	0/0:80:80,0:80:2819:0:0:0,-24.0824,-253.951	0/0:218:218,0:218:7750:0:0:0,-65.6245,-697.539	0/0:154:154,0:154:5473:0:0:0,-46.3586,-492.701	0/1:22:18,4:18:619:4:144:-6.69096,0,-49.4096	0/0:138:137,0:137:4871:0:0:0,-41.2411,-438.185	0/0:104:104,0:104:3635:0:0:0,-31.3071,-327.357	0/1:17:8,9:8:281:9:324:-24.3883,0,-20.5131	0/1:176:97,79:97:3405:79:2779:-197.36,0,-253.688	0/0:7:7,0:7:249:0:0:0,-2.10721,-22.7555	0/1:10:8,2:8:265:2:72:-3.82642,0,-21.1636	0/1:37:24,11:24:859:11:396:-25.0869,0,-66.7362	0/0:123:123,0:123:4329:0:0:0,-37.0267,-389.791	0/1:281:149,132:149:5311:132:4631:-332.361,0,-393.539	0/0:16:15,1:15:531:1:21:0,-2.71653,-46.0232	0/0:207:207,0:207:7357:0:0:0,-62.3132,-662.183	0/1:282:167,115:167:5888:115:4033:-278.265,0,-445.146	0/0:129:126,3:126:4422:3:84:0,-30.9947,-390.32	0/0:101:101,0:101:3584:0:0:0,-30.404,-322.75	0/1:120:51,68:51:1786:68:2432:-183.022,0,-124.906	0/0:152:150,2:150:5323:2:72:0,-38.9198,-472.373	0/0:80:80,0:80:2847:0:0:0,-24.0824,-256.468	0/0:66:66,0:66:2348:0:0:0,-19.868,-211.58	0/1:142:71,71:71:2496:71:2533:-185.473,0,-182.149	0/0:46:46,0:46:1630:0:0:0,-13.8474,-146.984	0/0:59:59,0:59:2107:0:0:0,-17.7608,-189.9	0/1:48:26,22:26:912:22:773:-55.44,0,-67.9454	0/0:174:174,0:174:6119:0:0:0,-52.3792,-550.816	0/0:177:177,0:177:6264:0:0:0,-53.2823,-563.856	0/0:116:116,0:116:4029:0:0:0,-34.9195,-362.803	0/0:200:200,0:200:7092:0:0:0,-60.206,-638.348	0/0:12:12,0:12:431:0:0:0,-3.61236,-39.1307	0/0:158:157,1:157:5591:1:36:0,-43.9645,-499.718	0/1:89:39,50:39:1394:50:1785:-134.131,0,-98.9675	0/0:167:167,0:167:5936:0:0:0,-50.272,-534.354	0/0:185:185,0:185:6507:0:0:0,-55.6905,-585.726	0/0:78:78,0:78:2785:0:0:0,-23.4803,-250.878	0/1:115:56,57:56:1997:57:1999:-145.803,0,-145.628	0/0:192:192,0:192:6861:0:0:0,-57.7978,-617.562	0/1:47:23,21:23:822:21:756:-54.7626,0,-60.701	0/0:112:112,0:112:3986:0:0:0,-33.7154,-358.931	0/0:108:106,1:106:3781:1:36:0,-28.9718,-336.891	0/0:104:104,0:104:3705:0:0:0,-31.3071,-333.652	0/1:216:116,98:116:4109:98:3501:-250.592,0,-305.288	0/1:98:35,61:35:1256:61:2192:-168.287,0,-84.087	0/0:175:175,0:175:6201:0:0:0,-52.6802,-558.195	0/0:173:172,0:172:6133:0:0:0,-51.7772,-551.713
chr02	14258400	.	C	A	204425	PASS	AB=0.508415;ABP=4.94732;AC=158;AF=0.840426;AN=188;AO=9233;CIGAR=1X;DP=10800;DPB=10800;DPRA=0;EPP=19913.5;EPPR=3379.66;GTI=1;LEN=1;MEANALT=1.08511;MQM=59.9825;MQMR=59.9564;NS=94;NUMALT=1;ODDS=1.01817;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=329658;QR=55406;RO=1559;RPL=9213;RPP=19878.9;RPPR=3379.66;RPR=20;RUN=1;SAF=9229;SAP=20017.5;SAR=4;SRF=1559;SRP=3388.34;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	1/1:199:0,199:0:0:199:7080:-637.258,-59.905,0	1/1:68:0,68:0:0:68:2418:-217.873,-20.47,0	1/1:116:1,115:1:36:115:4128:-368.105,-31.3212,0	0/1:63:38,25:38:1364:25:888:-61.2741,0,-104.096	0/1:98:51,47:51:1803:47:1673:-121.351,0,-133.05	1/1:150:0,150:0:0:150:5368:-483.252,-45.1545,0	1/1:226:1,224:1:36:224:7978:-714.446,-64.4933,0	1/1:61:0,61:0:0:61:2177:-196.194,-18.3628,0	1/1:93:0,93:0:0:93:3319:-298.927,-27.9958,0	1/1:188:0,187:0:0:187:6699:-602.625,-56.2926,0	1/1:120:0,120:0:0:120:4312:-388.255,-36.1236,0	1/1:95:0,95:0:0:95:3416:-307.653,-28.5979,0	0/1:194:90,104:90:3164:104:3736:-278.04,0,-226.312	0/1:78:37,41:37:1314:41:1461:-108.304,0,-95.0799	0/1:84:49,35:49:1747:35:1243:-86.8873,0,-132.227	1/1:193:0,193:0:0:193:6912:-622.146,-58.0988,0	0/1:79:47,32:47:1672:32:1152:-80.2088,0,-126.986	1/1:111:0,111:0:0:111:3959:-356.501,-33.4143,0	0/1:155:87,68:87:3103:68:2392:-168.876,0,-232.838	0/1:142:51,91:51:1806:91:3226:-247.815,0,-120.074	1/1:106:0,106:0:0:106:3792:-341.478,-31.9092,0	1/1:62:0,62:0:0:62:2224:-200.424,-18.6639,0	0/1:85:44,41:44:1567:41:1468:-106.829,0,-115.733	1/1:42:0,42:0:0:42:1493:-134.663,-12.6433,0	1/1:332:0,332:0:0:332:11745:-1056.92,-99.942,0	1/1:129:0,129:0:0:129:4603:-414.435,-38.8329,0	1/1:50:0,50:0:0:50:1796:-161.921,-15.0515,0	1/1:185:0,185:0:0:185:6590:-593.18,-55.6906,0	1/1:164:0,164:0:0:164:5850:-526.606,-49.3689,0	0/1:116:63,53:63:2260:53:1865:-133.1,0,-168.743	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:314:1,313:1:36:313:11163:-1000.96,-90.9251,0	1/1:154:0,154:0:0:154:5515:-496.473,-46.3586,0	0/1:176:80,96:80:2842:96:3440:-256.823,0,-203.034	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	1/1:138:0,138:0:0:138:4932:-444.031,-41.5421,0	1/1:74:0,73:0:0:73:2616:-235.328,-21.9752,0	1/1:130:0,130:0:0:130:4654:-419.021,-39.1339,0	1/1:97:0,97:0:0:97:3480:-313.411,-29.1999,0	0/1:105:51,54:51:1820:54:1905:-140.113,0,-132.471	1/1:54:0,54:0:0:54:1936:-174.516,-16.2556,0	0/1:103:65,38:65:2297:38:1364:-92.0546,0,-175.984	1/1:180:2,178:2:63:178:6350:-565.606,-48.2022,0	1/1:77:0,77:0:0:77:2756:-248.282,-23.1793,0	1/1:214:0,214:0:0:214:7663:-689.704,-64.4204,0	1/1:150:0,150:0:0:150:5372:-483.611,-45.1545,0	0/1:21:4,17:4:144:17:604:-48.3684,0,-6.99199	1/1:134:0,133:0:0:133:4720:-424.599,-40.037,0	1/1:105:0,105:0:0:105:3757:-338.329,-31.6082,0	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	0/1:170:74,96:74:2615:96:3402:-255.219,0,-184.418	1/1:7:0,7:0:0:7:243:-22.2075,-2.10721,0	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/1:36:11,25:11:388:25:900:-70.4839,0,-24.4203	1/1:115:0,114:0:0:114:4080:-367.027,-34.3174,0	0/1:277:130,146:130:4631:146:5201:-384.786,0,-333.422	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	1/1:202:0,201:0:0:201:7154:-643.558,-60.507,0	0/1:269:109,160:109:3901:160:5729:-434.745,0,-270.305	1/1:124:3,121:3:93:121:4335:-381.648,-28.651,0	1/1:99:0,99:0:0:99:3529:-317.749,-29.802,0	0/1:117:66,51:66:2338:51:1832:-129.936,0,-175.458	1/1:148:2,146:2:72:146:5221:-463.19,-37.7157,0	1/1:79:0,79:0:0:79:2804:-252.599,-23.7814,0	1/1:65:0,65:0:0:65:2321:-209.148,-19.567,0	0/1:142:71,71:71:2517:71:2533:-185.473,0,-184.035	1/1:46:0,46:0:0:46:1631:-147.032,-13.8474,0	1/1:59:0,59:0:0:59:2116:-190.708,-17.7608,0	0/1:48:22,26:22:788:26:924:-69.0282,0,-56.7954	1/1:169:0,169:0:0:169:6010:-541.004,-50.8741,0	1/1:173:0,173:0:0:173:6164:-554.859,-52.0782,0	1/1:112:0,112:0:0:112:3980:-358.381,-33.7154,0	1/1:194:0,194:0:0:194:6919:-622.773,-58.3998,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:156:1,155:1:36:155:5548:-495.846,-43.3624,0	0/1:87:49,38:49:1751:38:1332:-93.9869,0,-131.676	1/1:166:0,166:0:0:166:5913:-532.279,-49.971,0	1/1:182:1,181:1:36:181:6465:-578.338,-51.1892,0	1/1:78:0,78:0:0:78:2804:-252.582,-23.4803,0	0/1:113:58,55:58:2030:55:1968:-143.379,0,-148.953	1/1:189:0,188:0:0:188:6729:-605.323,-56.5936,0	0/1:47:24,23:24:860:23:828:-60.6957,0,-63.5711	1/1:112:0,112:0:0:112:4028:-362.707,-33.7154,0	1/1:106:0,106:0:0:106:3797:-341.926,-31.9092,0	1/1:104:0,104:0:0:104:3724:-335.36,-31.3071,0	0/1:214:99,115:99:3535:115:4120:-306.559,0,-253.939	0/1:96:61,35:61:2165:35:1260:-84.8066,0,-166.216	1/1:167:0,167:0:0:167:5958:-536.329,-50.272,0	1/1:169:0,169:0:0:169:6058:-545.322,-50.8741,0
chr02	14258418	.	C	G	54537.7	PASS	AB=0.4881;ABP=9.21205;AC=30;AF=0.159574;AN=188;AO=2473;CIGAR=1X;DP=18069;DPB=18069;DPRA=1.04695;EPP=5364.38;EPPR=33704.4;GTI=1;LEN=1;MEANALT=1;MQM=59.9721;MQMR=59.9884;NS=94;NUMALT=1;ODDS=2.42527;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87570;QR=554254;RO=15588;RPL=1554;RPP=357.071;RPPR=1231.8;RPR=919;RUN=1;SAF=1555;SAP=359.305;SAR=918;SRF=9286;SRP=1243.41;SRR=6302;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:65:65,0:65:2313:0:0:0,-19.5669,-208.429	0/0:274:274,0:274:9714:0:0:0,-82.4822,-874.214	0/0:239:239,0:239:8527:0:0:0,-71.9462,-767.433	0/0:273:272,1:272:9625:1:36:0,-78.5829,-862.612	0/1:95:40,55:40:1431:55:1959:-147.987,0,-100.489	0/1:138:73,65:73:2615:65:2320:-167.518,0,-194.055	0/0:253:253,0:253:9008:0:0:0,-76.1606,-810.701	0/0:329:328,1:328:11706:1:36:0,-95.4406,-1049.81	0/0:155:154,0:154:5488:0:0:0,-46.3586,-493.69	0/0:172:172,0:172:6135:0:0:0,-51.7772,-552.247	0/0:241:241,0:241:8542:0:0:0,-72.5482,-768.784	0/0:204:204,0:204:7264:0:0:0,-61.4101,-653.815	0/0:159:159,0:159:5662:0:0:0,-47.8638,-509.702	0/1:250:129,121:129:4632:121:4300:-311.651,0,-341.784	0/1:142:82,60:82:2922:60:2102:-146.7,0,-220.468	0/1:135:65,70:65:2324:70:2441:-179.304,0,-168.781	0/0:284:284,0:284:10112:0:0:0,-85.4925,-910.016	0/1:120:46,74:46:1622:74:2647:-202.352,0,-110.144	0/0:146:146,0:146:5189:0:0:0,-43.9504,-467.152	0/1:256:127,129:127:4493:129:4591:-336.293,0,-327.476	0/1:297:122,175:122:4335:175:6141:-463.393,0,-300.912	0/0:193:193,0:193:6852:0:0:0,-58.0988,-616.749	0/0:139:138,0:138:4911:0:0:0,-41.5421,-441.781	0/1:205:115,90:115:4090:90:3189:-225.523,0,-306.576	0/0:109:109,0:109:3872:0:0:0,-32.8123,-348.675	0/0:591:591,0:591:21027:0:0:0,-177.909,-1891.91	0/0:249:249,0:249:8862:0:0:0,-74.9565,-797.569	0/0:94:94,0:94:3341:0:0:0,-28.2968,-300.906	0/0:299:299,0:299:10635:0:0:0,-90.008,-957.065	0/0:236:234,0:234:8318:0:0:0,-70.441,-748.265	0/1:185:82,103:82:2936:103:3658:-273.735,0,-208.356	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:7:4,3:4:140:3:108:-7.96796,0,-10.8374	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:580:579,1:579:20555:1:36:0,-170.999,-1845.83	0/0:289:288,0:288:10265:0:0:0,-86.6966,-923.416	0/1:234:135,99:135:4805:99:3510:-245.671,0,-362.158	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:235:235,0:235:8321:0:0:0,-70.742,-748.904	0/0:106:106,0:106:3759:0:0:0,-31.9092,-338.51	0/0:241:241,0:241:8548:0:0:0,-72.5482,-769.325	0/0:207:207,0:207:7336:0:0:0,-62.3132,-660.294	0/1:169:79,90:79:2792:90:3158:-233.57,0,-200.645	0/0:154:154,0:154:5491:0:0:0,-46.3586,-494.319	0/1:187:92,95:92:3264:95:3387:-248.753,0,-237.688	0/0:278:276,2:276:9781:2:72:0,-76.8496,-873.407	0/0:161:161,0:161:5695:0:0:0,-48.4658,-512.671	0/0:307:307,0:307:10935:0:0:0,-92.4162,-984.05	0/0:307:307,0:307:10907:0:0:0,-92.4162,-981.533	0/1:23:17,6:17:599:6:207:-12.0432,0,-47.3144	0/0:223:222,0:222:7894:0:0:0,-66.8287,-710.13	0/0:129:129,0:129:4568:0:0:0,-38.8329,-411.286	0/1:19:9,10:9:320:10:356:-26.6617,0,-23.4228	0/1:275:154,121:154:5492:121:4269:-301.605,0,-411.624	0/0:30:30,0:30:1047:0:0:0,-9.0309,-94.5392	0/1:12:7,5:7:248:5:180:-12.9397,0,-19.0518	0/1:52:33,19:33:1176:19:680:-45.8756,0,-90.4942	0/0:157:157,0:157:5585:0:0:0,-47.2617,-502.775	0/1:405:223,182:223:7964:182:6445:-458.141,0,-594.866	0/0:16:16,0:16:563:0:0:0,-4.81648,-50.9992	0/0:312:312,0:312:11110:0:0:0,-93.9214,-999.795	0/1:409:245,164:245:8709:164:5829:-401.603,0,-660.684	0/0:185:182,3:182:6463:3:108:0,-45.6154,-571.682	0/0:130:130,0:130:4634:0:0:0,-39.1339,-417.194	0/1:233:97,136:97:3434:136:4783:-360.49,0,-239.131	0/0:266:264,2:264:9382:2:72:0,-73.2373,-837.51	0/0:113:113,0:113:4035:0:0:0,-34.0164,-363.338	0/0:162:162,0:162:5779:0:0:0,-48.7669,-520.223	0/1:220:124,96:124:4423:96:3387:-238.82,0,-332.016	0/0:51:50,0:50:1777:0:0:0,-15.0515,-159.806	0/0:165:165,0:165:5861:0:0:0,-49.6699,-527.605	0/1:95:44,51:44:1539:51:1808:-134.404,0,-110.2	0/0:335:334,1:334:11816:1:36:0,-97.2468,-1059.71	0/0:268:268,0:268:9513:0:0:0,-80.676,-856.13	0/0:188:188,0:188:6665:0:0:0,-56.5936,-599.923	0/0:307:307,0:307:10979:0:0:0,-92.4162,-988.004	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/0:217:216,1:216:7708:1:36:0,-61.7252,-690.156	0/1:117:56,61:56:1980:61:2184:-161.597,0,-143.252	0/0:319:319,0:319:11350:0:0:0,-96.0286,-1021.38	0/0:297:297,0:297:10523:0:0:0,-89.4059,-946.993	0/0:147:147,0:147:5243:0:0:0,-44.2514,-472.006	0/1:199:106,93:106:3788:93:3297:-237.044,0,-281.21	0/0:340:340,0:340:12047:0:0:0,-102.35,-1084.09	0/1:93:50,43:50:1792:43:1528:-109.816,0,-133.567	0/0:209:209,0:209:7455:0:0:0,-62.9153,-670.997	0/0:198:197,0:197:7000:0:0:0,-59.3029,-629.705	0/0:122:122,0:122:4328:0:0:0,-36.7257,-389.697	0/1:289:158,131:158:5625:131:4623:-329.236,0,-419.371	0/1:177:66,111:66:2356:111:3943:-301.782,0,-159.017	0/0:203:203,0:203:7221:0:0:0,-61.1091,-649.946	0/0:285:285,0:285:10118:0:0:0,-85.7935,-910.561
chr02	14799696	.	TC	CA,TA	181953	PASS	AB=0.392219,0.604276;ABP=290.885,272.465;AC=157,31;AF=0.835106,0.164894;AN=188;AO=7166,1734;CIGAR=2X,1M1X;DP=8925;DPB=8926;DPRA=0,1.05763;EPP=15563.8,3768.34;EPPR=3.0103;GTI=0;LEN=2,1;MEANALT=1.59574,2.22222;MQM=39.42,47.6373;MQMR=60;NS=94;NUMALT=2;ODDS=4.89384;PAIRED=0,0;PAIREDR=0;PAO=1,1;PQA=36,36;PQR=0;PRO=0;QA=252113,61626;QR=59;RO=2;RPL=0,0;RPP=15563.8,3768.34;RPPR=3.0103;RPR=7166,1734;RUN=1,1;SAF=0,0;SAP=15563.8,3768.34;SAR=7166,1734;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:16:0,16,0:0:0:16,0:558,0:-49.0532,-4.81648,0,-49.0532,-4.81648,-49.0532	1/1:69:0,68,1:0:0:68,1:2402,36:-207.384,-20.47,0,-204.464,-17.1923,-204.163	1/1:172:0,171,1:0:0:171,1:6028,36:-522.109,-51.4761,0,-519.189,-48.1984,-518.888	1/1:222:0,222,0:0:0:222,0:7874,0:-673.248,-66.8287,0,-673.248,-66.8287,-673.248	1/2:27:0,10,17:0:0:10,17:360,604:-76.8374,-48.7589,-45.7486,-28.4256,0,-23.3081	1/2:32:0,8,24:0:0:8,24:288,864:-93.0887,-70.4384,-68.0302,-23.0008,0,-15.7761	1/1:73:0,72,0:0:0:72,0:2528,0:-216.139,-21.6742,0,-216.139,-21.6742,-216.139	1/1:89:0,89,0:0:0:89,0:3166,0:-272.07,-26.7917,0,-272.07,-26.7917,-272.07	1/1:49:0,49,0:0:0:49,0:1708,0:-149.187,-14.7505,0,-149.187,-14.7505,-149.187	1/1:122:0,122,0:0:0:122,0:4208,0:-362.068,-36.7257,0,-362.068,-36.7257,-362.068	1/1:50:0,50,0:0:0:50,0:1750,0:-149.692,-15.0515,0,-149.692,-15.0515,-149.692	1/1:71:0,71,0:0:0:71,0:2513,0:-219.644,-21.3731,0,-219.644,-21.3731,-219.644	1/1:69:0,69,0:0:0:69,0:2443,0:-212.158,-20.7711,0,-212.158,-20.7711,-212.158	1/2:30:0,15,15:0:0:15,15:529,540:-85.4061,-44.0833,-39.5678,-41.6713,0,-37.1559	1/2:81:0,33,48:0:0:33,48:1160,1707:-227.163,-137.648,-127.714,-89.8561,0,-75.4066	1/2:46:0,15,30:0:0:15,30:514,1057:-124.737,-85.285,-80.7695,-39.5487,0,-30.5178	1/1:22:0,22,0:0:0:22,0:777,0:-68.0802,-6.62266,0,-68.0802,-6.62266,-68.0802	1/2:16:0,8,8:0:0:8,8:288,284:-46.0289,-23.3787,-20.9705,-23.0008,0,-20.5926	1/1:23:0,22,0:0:0:22,0:765,0:-66.8399,-6.62266,0,-66.8399,-6.62266,-66.8399	1/2:333:0,99,234:0:0:99,234:3491,8316:-938.554,-669.986,-640.184,-268.908,0,-198.467	1/2:260:0,117,143:0:0:117,143:4109,5088:-731.134,-411.499,-376.279,-319.979,0,-276.932	1/1:92:0,91,0:0:0:91,0:3224,0:-273.616,-27.3937,0,-273.616,-27.3937,-273.616	1/1:140:0,138,2:0:0:138,2:4791,68:-409.778,-41.5421,0,-404.302,-35.7286,-403.7	1/2:91:0,38,53:0:0:38,53:1355,1881:-257.345,-152.192,-140.753,-105.498,0,-89.5438	1/1:40:0,38,0:0:0:38,0:1344,0:-115.949,-11.4391,0,-115.949,-11.4391,-115.949	1/1:197:0,197,0:0:0:197,0:6880,0:-591.552,-59.3029,0,-591.552,-59.3029,-591.552	1/1:178:0,177,0:0:0:177,0:6204,0:-537.395,-53.2823,0,-537.395,-53.2823,-537.395	1/1:34:0,34,0:0:0:34,0:1190,0:-102.872,-10.235,0,-102.872,-10.235,-102.872	1/1:197:0,197,0:0:0:197,0:6936,0:-592.79,-59.3029,0,-592.79,-59.3029,-592.79	1/1:161:0,158,0:0:0:158,0:5559,0:-476.498,-47.5627,0,-476.498,-47.5627,-476.498	1/2:228:0,78,150:0:0:78,150:2738,5344:-643.754,-432.114,-408.633,-211.981,0,-166.827	1/1:92:0,92,0:0:0:92,0:3235,0:-279.531,-27.6948,0,-279.531,-27.6948,-279.531	1/1:28:0,27,0:0:0:27,0:948,0:-82.2394,-8.12781,0,-82.2394,-8.12781,-82.2394	1/1:23:0,23,0:0:0:23,0:790,0:-67.6496,-6.92369,0,-67.6496,-6.92369,-67.6496	1/2:34:0,28,6:0:0:28,6:973,216:-93.032,-17.881,-9.45212,-75.5043,0,-73.6982	1/1:17:0,17,0:0:0:17,0:586,0:-51.5234,-5.11751,0,-51.5234,-5.11751,-51.5234	1/1:202:0,202,0:0:0:202,0:7100,0:-609.947,-60.8081,0,-609.947,-60.8081,-609.947	1/1:98:0,98,0:0:0:98,0:3421,0:-295.717,-29.5009,0,-295.717,-29.5009,-295.717	1/2:52:1,26,25:1:23:26,25:929,885:-141.856,-69.7327,-63.6702,-70.772,0,-65.0109	1/2:14:0,8,6:0:0:8,6:288,201:-38.9724,-16.5012,-14.0929,-22.8095,0,-21.0034	1/1:151:0,149,0:0:0:149,0:5235,0:-451.309,-44.8535,0,-451.309,-44.8535,-451.309	1/1:18:0,18,0:0:0:18,0:633,0:-55.1413,-5.41854,0,-55.1413,-5.41854,-55.1413	1/1:75:0,74,0:0:0:74,0:2568,0:-222.231,-22.2762,0,-222.231,-22.2762,-222.231	1/1:41:0,41,0:0:0:41,0:1463,0:-125.249,-12.3422,0,-125.249,-12.3422,-125.249	1/2:64:0,32,32:0:0:32,32:1107,1125:-176.432,-90.6016,-80.9686,-86.1693,0,-76.5363	1/1:56:0,56,0:0:0:56,0:1988,0:-170.809,-16.8577,0,-170.809,-16.8577,-170.809	1/2:142:0,44,98:0:0:44,98:1513,3499:-400.784,-282.528,-269.282,-118.595,0,-89.0942	1/1:138:0,138,0:0:0:138,0:4852,0:-413.98,-41.5421,0,-413.98,-41.5421,-413.98	1/1:86:0,86,0:0:0:86,0:3024,0:-257.403,-25.8886,0,-257.403,-25.8886,-257.403	1/1:136:0,136,0:0:0:136,0:4854,0:-414.421,-40.9401,0,-414.421,-40.9401,-414.421	1/1:137:0,136,0:0:0:136,0:4779,0:-408.885,-40.9401,0,-408.885,-40.9401,-408.885	1/2:31:0,19,12:0:0:19,12:682,432:-87.1579,-35.2719,-29.5523,-52.2351,0,-48.6227	1/1:138:0,138,0:0:0:138,0:4849,0:-422.262,-41.5421,0,-422.262,-41.5421,-422.262	1/1:73:0,73,0:0:0:73,0:2555,0:-219.257,-21.9752,0,-219.257,-21.9752,-219.257	1/2:13:0,5,8:0:0:5,8:175,288:-37.4879,-23.7168,-22.2116,-14.1178,0,-11.7095	1/2:202:0,62,140:0:0:62,140:2186,4961:-570.144,-401.238,-382.575,-169.246,0,-127.102	1/1:34:0,34,0:0:0:34,0:1178,0:-100.816,-10.235,0,-100.816,-10.235,-1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chr02	15002067	.	G	A	438553	PASS	AB=0.550565;ABP=152.339;AC=154;AF=0.819149;AN=188;AO=19924;CIGAR=1X;DP=23034;DPB=23034;DPRA=0;EPP=43050.6;EPPR=6702.07;GTI=0;LEN=1;MEANALT=1.05319;MQM=59.9419;MQMR=59.9845;NS=94;NUMALT=1;ODDS=26.7604;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=711603;QR=109273;RO=3105;RPL=19912;RPP=43163.3;RPPR=6728.07;RPR=12;RUN=1;SAF=13;SAP=43154.6;SAR=19911;SRF=3;SRP=6719.4;SRR=3102;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:34:0,34:0:0:34:1220:-110.107,-10.235,0	1/1:168:1,167:1:32:167:5965:-533.701,-47.3737,0	0/1:169:83,85:83:2956:85:3018:-220.955,0,-215.381	1/1:261:0,261:0:0:261:9291:-836.158,-78.5688,0	0/1:44:19,25:19:667:25:900:-68.0757,0,-47.1093	0/1:41:15,26:15:528:26:936:-72.2172,0,-35.5091	0/1:143:77,66:77:2694:66:2338:-167.632,0,-199.66	1/1:213:0,213:0:0:213:7590:-683.139,-64.1194,0	1/1:114:0,114:0:0:114:4048:-364.501,-34.3174,0	1/1:134:0,134:0:0:134:4783:-430.628,-40.338,0	1/1:755:1,754:1:36:754:26929:-2419.15,-223.679,0	0/1:146:84,62:84:2922:62:2216:-155.754,0,-219.266	1/1:120:0,120:0:0:120:4277:-385.108,-36.1236,0	0/1:189:112,77:112:3929:77:2729:-188.958,0,-296.914	0/1:172:84,88:84:2963:88:3160:-232.847,0,-215.129	0/1:117:60,57:60:2127:57:2022:-147.031,0,-156.478	1/1:182:0,182:0:0:182:6502:-585.173,-54.7875,0	1/1:122:1,121:1:36:121:4340:-387.176,-33.1274,0	1/1:348:1,347:1:36:347:12394:-1111.38,-101.16,0	0/1:235:132,103:132:4599:103:3691:-261.649,0,-343.343	0/1:238:93,145:93:3278:145:5179:-394.6,0,-223.598	1/1:152:0,152:0:0:152:5445:-490.178,-45.7566,0	1/1:155:0,154:0:0:154:5515:-496.263,-46.3586,0	1/1:124:2,122:2:68:122:4343:-384.588,-30.87,0	1/1:115:0,115:0:0:115:4124:-371.319,-34.6185,0	1/1:401:0,401:0:0:401:14292:-1285.89,-120.713,0	1/1:273:0,273:0:0:273:9712:-874.031,-82.1812,0	1/1:68:0,68:0:0:68:2440:-219.855,-20.47,0	0/1:430:201,229:201:7110:229:8191:-607.753,0,-510.527	0/1:188:112,76:112:3940:76:2719:-188.359,0,-298.203	0/1:186:68,118:68:2357:118:4209:-322.992,0,-156.398	1/1:711:1,710:1:36:710:25338:-2276.12,-210.434,0	1/1:885:0,885:0:0:885:31639:-2846.52,-266.412,0	1/1:658:0,658:0:0:658:23476:-2112.17,-198.078,0	1/1:834:6,828:6:216:828:29571:-2640.49,-231.269,0	1/1:533:12,521:12:411:521:18589:-1635.27,-123.131,0	0/1:377:207,170:207:7301:170:6082:-433.993,0,-543.663	0/1:251:112,139:112:3938:139:4938:-369.013,0,-279.059	1/1:626:1,625:1:32:625:22338:-2006.62,-185.245,0	1/1:249:5,244:5:163:244:8720:-769.799,-59.9651,0	1/1:213:0,213:0:0:213:7616:-685.475,-64.1194,0	1/1:360:0,360:0:0:360:12906:-1161.34,-108.371,0	0/1:152:62,90:62:2169:90:3224:-244.625,0,-149.719	0/1:176:116,60:116:4094:60:2148:-140.606,0,-315.669	0/1:144:79,65:79:2798:65:2328:-166.432,0,-208.712	1/1:175:0,175:0:0:175:6259:-563.403,-52.6803,0	0/1:107:56,51:56:1957:51:1836:-133.31,0,-144.194	1/1:180:1,179:1:36:179:6393:-571.857,-50.5871,0	1/1:196:0,195:0:0:195:6936:-623.916,-58.7009,0	1/1:217:0,217:0:0:217:7774:-699.689,-65.3235,0	0/1:246:89,157:89:3138:157:5612:-431.149,0,-208.595	1/1:443:8,435:8:284:435:15565:-1374.65,-107.453,0	1/1:202:0,202:0:0:202:7228:-650.565,-60.8081,0	1/1:94:0,94:0:0:94:3348:-301.522,-28.2968,0	1/1:532:11,520:11:383:520:18583:-1637.14,-125.265,0	0/1:157:71,86:71:2506:86:3086:-230.706,0,-178.531	1/1:60:0,60:0:0:60:2126:-191.38,-18.0618,0	1/1:373:15,358:15:532:358:12807:-1104.23,-64.0711,0	1/1:352:9,343:9:320:343:12243:-1072.57,-76.8202,0	0/1:125:55,70:55:1935:70:2520:-189.422,0,-136.783	1/1:256:0,256:0:0:256:9134:-822.032,-77.0637,0	1/1:235:1,234:1:36:234:8369:-749.617,-67.1438,0	1/1:207:0,207:0:0:207:7422:-668.024,-62.3132,0	0/1:228:92,136:92:3254:136:4854:-368.374,0,-224.448	1/1:99:3,96:3:108:96:3444:-300.097,-19.7268,0	1/1:96:0,96:0:0:96:3418:-307.83,-28.8989,0	0/1:206:83,123:83:2934:123:4399:-334.071,0,-202.283	1/1:159:2,157:2:63:157:5584:-496.683,-41.8806,0	0/1:370:60,309:60:2115:309:11067:-884.338,0,-79.1792	1/1:166:0,166:0:0:166:5930:-533.804,-49.971,0	0/1:194:110,84:110:3875:84:3015:-213.18,0,-290.551	1/1:800:3,797:3:108:797:28355:-2540.49,-230.749,0	1/1:135:0,135:0:0:135:4790:-431.156,-40.6391,0	0/1:88:58,30:58:2046:30:1076:-70.6622,0,-157.92	1/1:226:0,226:0:0:226:8101:-728.314,-68.0328,0	1/1:228:0,228:0:0:228:8124:-731.116,-68.6348,0	1/1:140:0,140:0:0:140:4994:-449.606,-42.1442,0	1/1:209:1,208:1:36:208:7416:-663.858,-59.317,0	1/1:420:0,420:0:0:420:14992:-1348.28,-126.433,0	1/1:162:0,162:0:0:162:5811:-523.101,-48.7669,0	0/1:114:44,70:44:1538:70:2512:-192.009,0,-104.393	1/1:309:0,309:0:0:309:11009:-990.708,-93.0183,0	1/1:142:0,142:0:0:142:5070:-456.445,-42.7463,0	1/1:154:0,154:0:0:154:5516:-496.56,-46.3586,0	1/1:172:0,172:0:0:172:6160:-554.493,-51.7772,0	0/1:304:150,154:150:5256:154:5493:-402.985,0,-381.672	0/1:79:39,40:39:1396:40:1440:-106.116,0,-102.158	0/1:155:86,69:86:3025:69:2472:-176.074,0,-225.823	1/1:141:0,141:0:0:141:5063:-455.804,-42.4452,0	0/1:388:104,284:104:3674:284:10145:-796.177,0,-213.21	0/1:405:100,305:100:3517:305:10854:-854.84,0,-194.826	0/1:160:107,53:107:3765:53:1900:-123.113,0,-290.889	1/1:46:0,46:0:0:46:1624:-146.446,-13.8474,0	1/1:176:0,176:0:0:176:6303:-567.361,-52.9813,0
chr02	15092464	.	G	C	129154	PASS	AB=0.685414;ABP=2848.75;AC=100;AF=0.531915;AN=188;AO=6911;CIGAR=1X;DP=9938;DPB=9938;DPRA=0;EPP=15010.1;EPPR=6563.03;GTI=14;LEN=1;MEANALT=1.02128;MQM=59.5145;MQMR=59.9445;NS=94;NUMALT=1;ODDS=0.301413;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=247352;QR=107894;RO=3025;RPL=1;RPP=15001.4;RPPR=6571.71;RPR=6910;RUN=1;SAF=6910;SAP=15001.4;SAR=1;SRF=1;SRP=6563.03;SRR=3024;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:46:14,32:14:496:32:1144:-89.3088,0,-31.1269	0/1:139:17,122:17:608:122:4364:-350.732,0,-13.2089	0/1:144:30,114:30:1053:114:4076:-323.641,0,-51.7303	0/1:174:60,114:60:2140:114:4076:-314.612,0,-140.489	0/1:22:13,9:13:464:9:324:-22.8832,0,-35.4748	0/1:55:27,28:27:964:28:1004:-73.2556,0,-70.5202	1/1:131:9,122:9:324:122:4364:-363.416,-9.92908,0	0/1:173:43,130:43:1528:130:4648:-366.283,0,-85.7349	0/1:103:20,83:20:720:83:2956:-234.873,0,-34.1227	0/1:136:59,77:59:2108:77:2752:-206.945,0,-149.049	0/1:109:29,80:29:1032:80:2856:-224.439,0,-60.3812	0/1:95:35,60:35:1232:60:2156:-165.684,0,-82.5862	0/1:103:53,50:53:1900:50:1796:-130.894,0,-140.166	0/1:97:29,68:29:1036:68:2440:-190.623,0,-64.354	0/1:84:42,42:42:1496:42:1512:-111.054,0,-109.648	0/1:64:25,39:25:896:39:1404:-107.372,0,-61.6944	0/1:85:25,59:25:896:59:2116:-165.027,0,-55.3141	0/1:44:14,30:14:500:30:1072:-83.5119,0,-32.0909	0/1:58:7,51:7:248:51:1820:-146.579,0,-5.20445	0/1:155:37,118:37:1316:118:4204:-331.852,0,-72.082	0/1:173:53,119:53:1880:119:4236:-329.048,0,-117.218	0/1:87:18,69:18:632:69:2452:-194.734,0,-31.0171	0/1:112:24,88:24:860:88:3152:-249.948,0,-44.0065	1/1:109:5,104:5:176:104:3712:-318.01,-16.6273,0	0/1:71:13,58:13:464:58:2076:-165.691,0,-20.7244	0/1:274:56,218:56:2008:218:7800:-619.083,0,-98.4818	0/1:216:55,161:55:1949:161:5776:-454.81,0,-110.662	0/1:33:15,18:15:540:18:644:-48.3566,0,-39.0025	0/1:253:49,204:49:1748:204:7324:-582.983,0,-81.4436	0/1:168:49,119:49:1736:119:4272:-334.017,0,-105.952	0/1:130:34,96:34:1220:96:3452:-270.701,0,-70.9729	0/1:7:2,5:2:72:5:180:-14.434,0,-4.72951	1/1:13:1,12:1:36:12:432:-35.6229,-0.315115,0	0/1:5:1,4:1:36:4:144:-11.7944,0,-2.09312	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:20:3,17:3:108:17:612:-49.3541,0,-4.05457	0/1:237:115,122:115:4121:122:4376:-322.633,0,-299.728	1/1:139:13,126:13:460:126:4512:-364.457,-0.107796,0	0/1:91:25,66:25:896:66:2368:-185.868,0,-53.5666	0/1:4:1,3:1:36:3:104:-8.49868,0,-2.39415	0/1:124:37,87:37:1316:87:3120:-243.588,0,-81.2564	0/1:32:10,22:10:352:22:784:-61.0016,0,-22.3852	0/1:107:27,80:27:964:80:2856:-224.18,0,-54.8666	0/1:87:18,69:18:648:69:2472:-196.538,0,-32.4623	0/1:56:28,28:28:996:28:1008:-74.1787,0,-73.0972	0/1:114:29,85:29:1044:85:3036:-239.139,0,-59.9574	0/1:109:27,82:27:956:82:2940:-231.91,0,-53.5435	0/1:196:47,149:47:1672:149:5320:-419.716,0,-91.7585	0/1:135:16,119:16:557:119:4252:-342.19,0,-9.81652	0/1:142:58,84:58:2068:84:3016:-228.892,0,-143.645	0/1:212:35,177:35:1236:177:6348:-507.452,0,-47.7259	0/1:7:1,6:1:32:6:216:-17.6833,0,-1.0921	0/1:115:23,92:23:824:92:3296:-262.135,0,-39.8649	0/1:73:15,58:15:532:58:2084:-165.848,0,-26.2379	0/1:23:3,20:3:108:20:716:-57.844,0,-3.15148	0/1:141:57,84:57:2028:84:3004:-228.1,0,-140.348	0/1:63:6,57:6:212:57:2040:-164.907,0,-0.459907	1/1:12:1,11:1:36:11:384:-31.295,-0.0140851,0	0/1:21:7,14:7:244:14:500:-39.0112,0,-15.9778	0/1:100:31,69:31:1104:69:2460:-191.53,0,-69.5676	0/1:151:55,96:55:1968:96:3448:-265.045,0,-131.94	0/1:20:3,17:3:108:17:608:-49.0314,0,-4.05457	0/1:298:155,143:155:5529:143:5128:-371.938,0,-408.028	0/1:165:45,120:45:1589:120:4308:-338.182,0,-93.6284	0/1:102:37,65:37:1316:65:2328:-178.874,0,-88.0361	0/1:85:22,63:22:784:63:2256:-177.609,0,-45.2954	0/1:127:30,97:30:1072:97:3460:-272.794,0,-58.5607	0/1:143:51,92:51:1828:92:3300:-254.137,0,-121.754	0/1:51:18,33:18:648:33:1184:-91.4945,0,-43.2994	0/1:69:7,62:7:248:62:2212:-178.543,0,-1.89312	0/1:87:24,63:24:864:63:2264:-177.829,0,-51.893	0/1:34:23,11:23:804:11:392:-25.3743,0,-62.4443	0/1:123:12,111:12:424:111:3976:-320.89,0,-1.46973	0/1:104:56,48:56:2016:48:1720:-123.778,0,-150.406	0/1:149:40,109:40:1428:109:3908:-307.029,0,-83.9182	0/1:231:113,118:113:4017:118:4216:-310.046,0,-292.182	0/1:70:27,43:27:968:43:1544:-118.173,0,-66.3653	0/1:163:61,102:61:2172:102:3644:-279.027,0,-146.679	0/1:34:10,24:10:360:24:856:-67.1261,0,-22.5093	0/1:106:29,77:29:1040:77:2752:-216.009,0,-62.0052	0/1:113:30,83:30:1072:83:2968:-233.094,0,-62.7761	0/1:239:47,192:47:1680:192:6896:-548.593,0,-79.5409	0/1:103:31,72:31:1112:72:2580:-201.174,0,-69.3853	0/1:87:37,50:37:1316:50:1784:-134.644,0,-92.5522	0/1:68:19,49:19:680:49:1744:-136.756,0,-41.0591	0/1:175:82,93:82:2929:93:3328:-247.003,0,-211.163	0/1:39:14,25:14:500:25:896:-69.1849,0,-33.5259	0/1:89:39,50:39:1396:50:1776:-133.261,0,-99.1474	0/1:90:39,51:39:1400:51:1836:-138.372,0,-99.0163	0/1:70:29,41:29:1044:41:1456:-110.253,0,-73.2027	0/1:186:62,124:62:2224:124:4432:-342.996,0,-144.433	0/1:69:27,42:27:951:42:1508:-115.201,0,-65.1328	0/1:146:102,44:102:3652:44:1548:-95.6552,0,-284.933	0/1:120:53,67:53:1891:67:2392:-179.392,0,-134.344
chr02	15092471	.	T	A	1661.02	PASS	AB=0.141503;ABP=6953.15;AC=41;AF=0.218085;AN=188;AO=1331;CIGAR=1X;DP=14680;DPB=14680;DPRA=12.5026;EPP=2893.24;EPPR=28963.9;GTI=29;LEN=1;MEANALT=1.11111;MQM=59.988;MQMR=59.5714;NS=94;NUMALT=1;ODDS=1.44499;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47673;QR=477435;RO=13337;RPL=1329;RPP=2875.89;RPPR=28903.2;RPR=2;RUN=1;SAF=2;SAP=2875.89;SAR=1329;SRF=13330;SRP=28903.2;SRR=7;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:75:73,2:73:2612:2:72:0,-15.7405,-228.176	0/0:219:209,10:209:7508:10:360:0,-33.1813,-642.436	0/0:213:196,16:196:7012:16:576:0,-12.0023,-578.902	0/1:290:261,29:261:9353:29:1044:-6.97611,0,-754.361	0/1:37:32,5:32:1152:5:180:-5.41396,0,-92.8474	0/1:82:73,9:73:2612:9:324:-4.8214,0,-210.624	0/0:233:230,3:230:8240:3:108:0,-60.0648,-731.513	0/0:232:221,11:221:7908:11:396:0,-33.8562,-675.572	0/0:162:153,9:153:5434:9:324:0,-19.261,-459.262	0/1:143:119,24:119:4264:24:856:-34.3138,0,-340.823	0/0:138:126,12:126:4524:12:428:0,-2.68333,-368.293	0/1:138:122,16:122:4375:16:576:-10.6328,0,-352.321	0/1:128:107,20:107:3831:20:720:-26.5396,0,-306.357	0/0:140:129,11:129:4636:11:392:0,-6.52414,-381.713	0/1:91:77,14:77:2768:14:500:-17.9424,0,-221.947	0/1:80:72,8:72:2584:8:288:-2.18501,0,-208.665	0/0:123:112,11:112:4024:11:396:0,-1.04394,-326.328	0/1:76:68,8:68:2439:8:288:-3.38913,0,-196.776	0/0:83:76,7:76:2728:7:252:0,-1.95653,-222.627	0/0:291:275,16:275:9856:16:572:0,-35.7863,-835.111	0/1:241:214,27:214:7677:27:964:-14.5286,0,-618.34	0/0:141:129,12:129:4628:12:432:0,-3.22403,-377.329	0/0:149:142,7:142:5096:7:252:0,-21.8245,-435.503	0/0:205:201,4:201:7177:4:144:0,-48.3975,-632.553	0/0:129:128,1:128:4573:1:36:0,-35.2346,-408.063	0/0:421:396,25:396:14122:25:900:0,-45.4135,-1188.72	0/0:290:266,24:266:9514:24:864:0,-9.21613,-777.983	0/1:63:55,8:55:1964:8:284:-6.93846,0,-158.066	0/0:398:380,18:380:13636:18:648:0,-61.1581,-1168.23	0/1:249:223,25:223:7989:25:896:-5.98386,0,-643.96	0/0:196:181,15:181:6469:15:540:0,-10.0653,-532.228	0/1:14:12,2:12:432:2:72:-2.6223,0,-34.9961	0/0:21:20,1:20:716:1:36:0,-2.72335,-61.1648	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4192	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6367	0/0:27:26,1:26:936:1:36:0,-4.52953,-80.9226	0/1:323:276,46:276:9892:46:1648:-51.318,0,-792.763	0/0:223:215,8:215:7674:8:288:0,-40.8623,-664.227	0/0:118:112,6:112:4020:6:216:0,-15.731,-342.064	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:180:158,21:158:5660:21:752:-13.7626,0,-455.134	0/0:46:44,2:44:1576:2:72:0,-7.01066,-135.041	0/0:208:196,12:196:7028:12:420:0,-24.4802,-593.543	0/0:131:123,8:123:4420:8:288:0,-13.1675,-371.691	0/1:85:65,20:65:2323:20:716:-39.1802,0,-183.742	0/0:174:169,5:169:6056:5:180:0,-35.8272,-528.524	0/0:191:179,10:179:6382:10:356:0,-24.871,-541.686	0/0:302:290,12:290:10372:12:428:0,-52.0522,-894.474	0/0:214:211,3:211:7541:3:108:0,-54.3452,-668.619	0/1:187:155,32:155:5534:32:1148:-47.3372,0,-441.225	0/0:301:285,16:285:10224:16:576:0,-38.435,-867.721	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.2784	0/0:197:185,12:185:6628:12:432:0,-20.0817,-557.228	0/0:125:121,4:121:4321:4:144:0,-24.3151,-375.684	0/0:36:33,3:33:1184:3:108:0,-0.76191,-96.7931	0/1:202:172,30:172:6156:30:1065:-35.3516,0,-493.266	0/0:106:103,3:103:3692:3:104:0,-22.2064,-322.67	0/0:13:12,1:12:424:1:36:0,-0.315115,-34.8968	0/1:39:34,4:34:1224:4:144:-1.51495,0,-98.6603	0/1:168:151,17:151:5408:17:600:-3.75616,0,-436.23	0/1:224:201,23:201:7193:23:816:-6.331,0,-579.938	0/0:26:25,1:25:877:1:36:0,-4.2285,-75.6469	0/1:326:259,67:259:9266:67:2392:-117.402,0,-735.7	0/1:253:229,24:229:8181:24:860:-1.56125,0,-660.079	0/1:130:117,13:117:4184:13:468:-3.32575,0,-337.244	0/0:125:116,9:116:4152:9:316:0,-8.84989,-344.99	0/0:236:222,14:222:7944:14:500:0,-25.7069,-668.643	0/1:188:161,27:161:5768:27:964:-30.4832,0,-462.59	0/1:65:59,6:59:2101:6:216:-0.223563,0,-169.759	0/0:120:118,2:118:4244:2:72:0,-29.2869,-375.163	0/0:127:119,8:119:4252:8:288:0,-11.9634,-356.581	0/1:42:36,6:36:1288:6:208:-6.41582,0,-103.565	0/0:183:176,7:176:6281:7:248:0,-32.4243,-542.606	0/1:139:109,30:109:3908:30:1072:-54.9493,0,-310.049	0/0:230:221,9:221:7897:9:324:0,-39.731,-681.186	0/1:309:260,48:260:9278:48:1724:-62.3686,0,-741.871	0/0:126:118,8:118:4228:8:288:0,-11.6624,-354.384	0/1:208:178,30:178:6384:30:1080:-34.899,0,-511.717	0/1:39:34,5:34:1216:5:180:-4.8119,0,-98.0064	0/0:172:157,15:157:5636:15:540:0,-2.84062,-458.402	0/0:184:168,16:168:6000:16:576:0,-3.21453,-487.575	0/0:378:349,29:349:12497:29:1036:0,-20.2354,-1030.92	0/0:171:161,10:161:5746:10:360:0,-18.7381,-484.246	0/1:114:93,21:93:3344:21:752:-33.6888,0,-266.85	0/1:117:104,11:104:3732:11:396:-1.00487,0,-301.041	0/1:221:191,30:191:6845:30:1068:-29.9044,0,-549.515	0/0:53:52,1:52:1868:1:36:0,-12.3563,-164.759	0/1:118:97,21:97:3480:21:756:-32.8457,0,-277.795	0/1:106:91,15:91:3263:15:540:-17.0274,0,-261.916	0/1:108:91,17:91:3260:17:604:-22.1794,0,-261.029	0/1:281:243,38:243:8674:38:1364:-38.4713,0,-695.844	0/1:100:81,19:81:2884:19:676:-31.065,0,-229.417	0/1:173:130,42:130:4648:42:1504:-83.5175,0,-366.241	0/1:149:126,23:126:4528:23:828:-29.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chr02	15092521	.	GGAC	TGAT,CGAT	670407	PASS	AB=0.494207,0.50329;ABP=6.1551,4.02489;AC=147,41;AF=0.781915,0.218085;AN=188;AO=19272,5493;CIGAR=1X2M1X,1X2M1X;DP=24833;DPB=24841.2;DPRA=0,1.37736;EPP=41851.6,11930.9;EPPR=5.18177;GTI=0;LEN=4,4;MEANALT=2.2766,2.6129;MQM=59.4969,59.5076;MQMR=60;NS=94;NUMALT=2;ODDS=4.10294;PAIRED=0,0;PAIREDR=0;PAO=21.5,8.5;PQA=740,302;PQR=0;PRO=3;QA=676739,191387;QR=36;RO=1;RPL=10649,2887;RPP=465.505,34.2249;RPPR=5.18177;RPR=8623,2606;RUN=1,1;SAF=10649,2887;SAP=465.505,34.2249;SAR=8623,2606;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:108:0,107,0:0:0:107,0:3672,0:-330.266,-32.2102,0,-330.266,-32.2102,-330.266	1/1:423:0,423,0:0:0:423,0:14887,0:-1338.19,-127.336,0,-1338.19,-127.336,-1338.19	1/2:413:0,221,191:0:0:221,191:7749,6703:-1175.49,-545.049,-478.522,-630.491,0,-572.994	1/1:460:0,457,1:0:0:457,1:16028,36:-1441.76,-137.571,0,-1438.82,-134.626,-1438.52	1/2:105:0,55,50:0:0:55,50:1948,1762:-302.427,-143.79,-127.233,-158.99,0,-143.939	1/2:172:0,93,78:0:0:93,78:3261,2731:-487.082,-222.133,-194.137,-264.94,0,-241.459	1/2:471:0,231,239:0:0:231,239:8118,8325:-1336.95,-676.206,-606.668,-660.673,0,-588.727	1/1:452:0,451,1:0:0:451,1:15840,36:-1424.52,-135.765,0,-1421.58,-132.467,-1421.28	1/1:265:0,264,1:0:0:264,1:9218,36:-829.229,-79.4719,0,-826.291,-76.4745,-825.99	1/1:250:0,250,0:0:0:250,0:8778,0:-789.88,-75.2575,0,-789.88,-75.2575,-789.88	1/1:200:0,199,0:0:0:199,0:6994,0:-628.824,-59.905,0,-628.824,-59.905,-628.824	1/2:228:0,104,122:0:0:104,122:3637,4277:-643.828,-348.005,-316.697,-295.823,0,-259.098	1/1:194:0,193,0:0:0:193,0:6832,0:-614.488,-58.0988,0,-614.488,-58.0988,-614.488	1/2:229:0,100,129:0:0:100,129:3522,4507:-652.978,-366.262,-336.159,-286.708,0,-247.875	1/2:155:0,75,80:0:0:75,80:2644,2796:-443.026,-227.755,-205.178,-215.622,0,-191.54	1/2:133:0,54,79:0:0:54,79:1901,2762:-379.748,-225.025,-208.77,-155.073,0,-131.292	1/1:189:0,188,0:0:0:188,0:6632,0:-596.448,-56.5936,0,-596.448,-56.5936,-596.448	1/1:136:0,136,0:0:0:136,0:4802,0:-432.032,-40.9401,0,-432.032,-40.9401,-432.032	1/1:109:0,109,0:0:0:109,0:3843,0:-345.959,-32.8123,0,-345.959,-32.8123,-345.959	1/2:577:0,306,269:0:0:306,269:10781,9337:-1636.6,-758.975,-666.86,-877.694,0,-796.717	1/2:386:0,184,201:0:0:184,201:6377,7041:-1090.99,-572.798,-517.409,-518.178,0,-457.671	1/1:206:0,205,0:0:0:205,0:7212,0:-648.284,-61.7112,0,-648.284,-61.7112,-648.284	1/1:337:0,334,1:0:0:334,1:11640,35:-1046.01,-100.544,0,-1043.17,-97.6796,-1042.86	1/1:333:0,313,19:0:0:313,19:10978,661:-987.362,-94.2224,0,-933.618,-40.4897,-927.898	1/1:197:0,195,1:0:0:195,1:6815,36:-612.715,-58.7009,0,-609.778,-55.7135,-609.477	1/1:689:0,686,2:0:0:686,2:24074,64:-2164.46,-206.507,0,-2159.31,-201.312,-2158.71	1/1:468:0,465,1:0:0:465,1:16346,36:-1470.07,-139.979,0,-1467.13,-137.042,-1466.83	1/1:84:0,84,0:0:0:84,0:2955,0:-266.163,-25.2865,0,-266.163,-25.2865,-266.163	1/2:655:0,304,351:0:0:304,351:10712,12221:-1865.58,-993.9,-902.387,-872.03,0,-766.369	1/2:449:0,220,229:0:0:220,229:7699,8005:-1277.68,-651.377,-585.151,-626.653,0,-557.717	1/2:376:0,215,161:0:0:215,161:7472,5634:-1065.74,-458.531,-393.81,-607.554,0,-559.088	1/1:18:0,18,0:0:0:18,0:613,0:-55.4781,-5.41854,0,-55.4781,-5.41854,-55.4781	1/1:38:0,38,0:0:0:38,0:1350,0:-121.799,-11.4391,0,-121.799,-11.4391,-121.799	1/1:7:0,7,0:0:0:7,0:245,0:-22.3869,-2.10721,0,-22.3869,-2.10721,-22.3869	1/2:25:0,10,15:0:0:10,15:345,520:-70.6292,-42.6028,-39.5925,-28.3718,0,-23.8564	1/2:30:0,19,11:0:0:19,11:662,361:-83.3143,-29.4957,-23.7762,-54.154,0,-50.8427	1/2:487:0,231,254:0:0:231,254:8167,8818:-1381.74,-716.745,-647.207,-665.031,0,-588.57	1/2:482:0,216,265:0:0:216,265:7611,9185:-1365.69,-746.204,-681.182,-619.478,0,-539.705	1/1:186:0,183,2:0:0:183,2:6492,71:-583.845,-55.0885,0,-578.06,-49.3066,-577.458	1/2:4:0,3,1:0:0:3,1:107,30:-11.4635,-2.69854,-1.79545,-9.07908,0,-8.77805	1/1:370:0,368,1:0:0:368,1:12963,36:-1165.75,-110.779,0,-1162.81,-107.842,-1162.51	1/1:96:0,96,0:0:0:96,0:3365,0:-302.484,-28.8989,0,-302.484,-28.8989,-302.484	1/2:446:0,242,203:0:0:242,203:8469,7079:-1263.85,-575.631,-502.781,-688.15,0,-627.041	1/2:243:0,138,105:0:0:138,105:4850,3624:-689.304,-294.703,-253.161,-394.948,0,-363.34	1/2:141:0,69,71:0:0:69,71:2383,2445:-392.197,-198.592,-177.821,-193.629,0,-172.256	1/1:265:0,264,1:0:0:264,1:9318,36:-838.109,-79.4719,0,-835.172,-76.1747,-834.871	1/2:313:0,160,153:0:0:160,153:5621,5374:-894.952,-437.528,-389.363,-457.715,0,-411.658	1/1:538:0,534,2:0:0:534,2:18708,72:-1682.46,-160.75,0,-1676.59,-154.86,-1675.99	1/1:372:0,372,0:0:0:372,0:13115,0:-1179.95,-111.983,0,-1179.95,-111.983,-1179.95	1/1:340:0,337,0:0:0:337,0:11850,0:-1065.82,-101.447,0,-1065.82,-101.447,-1065.82	1/2:475:0,248,225:0:0:248,225:8741,7856:-1350.12,-638.672,-564.016,-711.534,0,-643.802	1/2:31:0,25,6:0:0:25,6:869,216:-88.5876,-17.9843,-10.4586,-70.9607,0,-69.1545	1/1:298:0,298,0:0:0:298,0:10509,0:-945.274,-89.7069,0,-945.274,-89.7069,-945.274	1/1:224:0,223,0:0:0:223,0:7863,0:-707.232,-67.1297,0,-707.232,-67.1297,-707.232	1/2:44:0,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chr02	15261651	.	T	A	94088	PASS	AB=0.5315;ABP=22.436;AC=148;AF=0.787234;AN=188;AO=4357;CIGAR=1X;DP=5422;DPB=5422;DPRA=0;EPP=9420.74;EPPR=2296.12;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9612;MQMR=59.5752;NS=94;NUMALT=1;ODDS=0.455304;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156085;QR=37896;RO=1064;RPL=4353;RPP=9429.4;RPPR=2296.12;RPR=4;RUN=1;SAF=1;SAP=9455.43;SAR=4356;SRF=0;SRP=2313.46;SRR=1064;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:11:0,11:0:0:11:388:-35.2574,-3.31133,0	1/1:78:0,78:0:0:78:2779:-250.333,-23.4803,0	0/1:65:22,43:22:784:43:1548:-120.046,0,-51.3088	1/1:86:0,86:0:0:86:3064:-275.988,-25.8886,0	0/1:45:23,22:23:794:22:792:-58.0593,0,-57.9508	0/1:29:8,21:8:288:21:756:-59.6374,0,-17.5375	0/1:54:22,32:22:788:32:1152:-87.7345,0,-54.9822	1/1:84:1,83:1:36:83:2975:-264.375,-21.6882,0	1/1:55:0,55:0:0:55:1964:-177.035,-16.5567,0	1/1:48:0,47:0:0:47:1688:-151.847,-14.1484,0	1/1:37:0,37:0:0:37:1332:-120.182,-11.1381,0	0/1:44:24,20:24:856:20:720:-51.8835,0,-64.0636	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	0/1:56:26,30:26:932:30:1063:-79.1194,0,-67.3412	0/1:56:32,24:32:1148:24:859:-60.7741,0,-86.6811	0/1:37:18,19:18:644:19:684:-50.7522,0,-47.1506	1/1:42:0,42:0:0:42:1508:-136.01,-12.6433,0	0/1:42:23,19:23:820:19:684:-49.2462,0,-61.466	1/1:33:0,33:0:0:33:1184:-106.855,-9.93399,0	0/1:144:49,95:49:1752:95:3416:-264.305,0,-114.519	0/1:66:23,43:23:828:43:1540:-119.025,0,-54.8616	1/1:59:0,59:0:0:59:2116:-190.709,-17.7608,0	1/1:19:0,19:0:0:19:671:-60.7158,-5.71957,0	1/1:28:1,27:1:36:27:972:-84.1996,-4.83057,0	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:191:0,191:0:0:191:6810:-612.97,-57.4967,0	1/1:93:0,93:0:0:93:3304:-297.49,-27.9958,0	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	0/1:79:33,46:33:1169:46:1648:-124.799,0,-81.7316	0/1:73:26,47:26:932:47:1688:-130.232,0,-62.2191	0/1:50:31,19:31:1089:19:665:-45.1213,0,-83.2428	1/1:11:0,11:0:0:11:396:-35.852,-3.31133,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:34:20,14:20:716:14:500:-35.1012,0,-54.5318	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/1:159:91,68:91:3268:68:2444:-172.351,0,-246.444	0/1:106:59,47:59:2086:47:1673:-118.946,0,-156.097	1/1:43:0,43:0:0:43:1548:-139.613,-12.9443,0	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	1/1:95:0,95:0:0:95:3408:-306.934,-28.5979,0	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	0/1:49:19,30:19:665:30:1076:-82.4024,0,-45.4214	0/1:31:15,16:15:540:16:572:-42.4815,0,-39.6023	0/1:37:19,18:19:680:18:648:-47.5138,0,-50.3901	1/1:64:0,64:0:0:64:2292:-206.541,-19.2659,0	0/1:86:52,34:52:1864:34:1220:-84.2182,0,-142.141	1/1:104:0,104:0:0:104:3740:-336.799,-31.3071,0	1/1:87:0,87:0:0:87:3120:-281.024,-26.1896,0	1/1:57:0,57:0:0:57:2044:-184.232,-17.1587,0	0/1:91:32,59:32:1129:59:2124:-164.034,0,-74.5217	0/1:26:10,16:10:356:16:576:-44.3482,0,-24.5545	1/1:73:0,73:0:0:73:2616:-235.688,-21.9752,0	1/1:24:0,24:0:0:24:852:-76.9971,-7.22472,0	0/1:12:8,4:8:288:4:140:-9.33222,0,-22.655	0/1:57:22,35:22:777:35:1256:-96.1866,0,-52.6576	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:18:9,9:9:320:9:324:-24.0873,0,-23.7238	0/1:47:20,27:20:716:27:945:-71.2138,0,-50.6175	0/1:35:18,17:18:640:17:608:-44.516,0,-47.3851	1/1:108:1,107:1:36:107:3831:-341.388,-28.913,0	1/1:17:0,17:0:0:17:595:-53.8767,-5.11751,0	1/1:140:0,140:0:0:140:5018:-451.765,-42.1442,0	0/1:90:39,51:39:1372:51:1832:-138.068,0,-96.685	1/1:58:5,53:5:180:53:1877:-152.655,-0.907675,0	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	0/1:69:35,34:35:1233:34:1224:-89.696,0,-90.501	1/1:68:0,68:0:0:68:2440:-219.855,-20.47,0	0/1:24:13,11:13:453:11:392:-28.3953,0,-33.8703	1/1:79:0,79:0:0:79:2817:-253.76,-23.7814,0	0/1:56:23,33:23:816:33:1184:-90.0106,0,-56.8946	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:60:0,60:0:0:60:2160:-194.667,-18.0618,0	0/1:31:20,11:20:720:11:392:-26.2881,0,-55.7877	1/1:106:0,106:0:0:106:3795:-341.691,-31.9092,0	1/1:127:0,127:0:0:127:4560:-410.565,-38.2308,0	1/1:61:0,61:0:0:61:2192:-197.545,-18.3628,0	1/1:34:0,34:0:0:34:1224:-110.467,-10.235,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	0/1:44:21,23:21:752:23:824:-61.238,0,-54.7609	1/1:181:0,181:0:0:181:6482:-583.461,-54.4864,0	1/1:99:0,99:0:0:99:3560:-320.607,-29.802,0	1/1:33:0,33:0:0:33:1188:-107.226,-9.93399,0	1/1:56:0,56:0:0:56:2016:-181.713,-16.8577,0	0/1:95:52,43:52:1845:43:1544:-110.655,0,-137.73	0/1:39:16,23:16:568:23:828:-63.1039,0,-39.6953	1/1:60:0,60:0:0:60:2145:-193.316,-18.0618,0	1/1:56:0,56:0:0:56:2003:-180.543,-16.8577,0	0/1:34:12,22:12:432:22:792:-61.3707,0,-28.9723	0/1:90:45,45:45:1616:45:1603:-117.466,0,-118.318	0/1:44:24,20:24:860:20:720:-51.8835,0,-64.4671	1/1:62:0,62:0:0:62:2232:-201.144,-18.6639,0	1/1:66:0,66:0:0:66:2359:-212.568,-19.868,0
chr02	15261662	.	G	A	16930.1	PASS	AB=0.462693;ABP=30.3919;AC=40;AF=0.212766;AN=188;AO=1059;CIGAR=1X;DP=5431;DPB=5431;DPRA=1.00819;EPP=2302.6;EPPR=9490.17;GTI=1;LEN=1;MEANALT=1.02222;MQM=59.5496;MQMR=59.9659;NS=94;NUMALT=1;ODDS=0.729547;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=37896;QR=155722;RO=4369;RPL=1059;RPP=2302.6;RPPR=9490.17;RPR=0;RUN=1;SAF=0;SAP=2302.6;SAR=1059;SRF=0;SRP=9490.17;SRR=4369;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:11:11,0:11:384:0:0:0,-3.31133,-34.8947	0/0:81:81,0:81:2879:0:0:0,-24.3834,-259.329	0/1:63:42,21:42:1508:21:752:-49.0332,0,-117.05	0/0:86:86,0:86:3072:0:0:0,-25.8886,-276.709	0/1:46:24,22:24:856:22:780:-56.4023,0,-63.5137	0/1:32:24,8:24:852:8:288:-16.6344,0,-67.3674	0/1:55:32,23:32:1120:23:798:-55.5705,0,-84.551	0/0:86:84,2:84:2975:2:72:0,-19.0519,-261.144	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/1:41:19,22:19:680:22:779:-58.0376,0,-49.1869	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/1:56:29,27:29:1019:27:972:-70.9402,0,-75.152	0/1:56:24,32:24:856:32:1144:-86.3718,0,-60.5034	0/1:37:19,18:19:680:18:640:-46.7866,0,-50.3911	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.054	0/1:42:20,22:20:720:22:792:-58.9442,0,-52.4846	0/0:33:33,0:33:1170:0:0:0,-9.93399,-105.592	0/1:145:95,50:95:3370:50:1796:-118.226,0,-259.868	0/1:66:43,23:43:1539:23:824:-54.5008,0,-118.934	0/0:57:56,0:56:1995:0:0:0,-16.8577,-179.464	0/0:19:19,0:19:667:0:0:0,-5.71957,-60.3546	0/0:28:27,1:27:964:1:36:0,-4.83056,-83.4767	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:189:189,0:189:6743:0:0:0,-56.8947,-606.946	0/0:92:92,0:92:3276:0:0:0,-27.6948,-294.691	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:79:47,32:47:1676:32:1144:-79.4858,0,-127.334	0/1:75:49,26:49:1752:26:928:-61.2564,0,-135.387	0/1:48:18,30:18:644:30:1072:-82.32,0,-43.8412	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/1:34:15,19:15:531:19:684:-51.6544,0,-37.8869	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:163:70,93:70:2494:93:3332:-250.998,0,-175.642	0/1:106:49,57:49:1752:57:2044:-152.322,0,-126.055	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	0/0:95:94,0:94:3348:0:0:0,-28.2968,-301.179	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/1:50:30,20:30:1072:20:716:-49.7159,0,-81.741	0/1:30:16,14:16:576:14:504:-36.6672,0,-43.1441	0/1:39:20,19:20:716:19:671:-48.9753,0,-53.0275	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/1:85:35,50:35:1252:50:1788:-135.606,0,-87.3975	0/0:106:106,0:106:3776:0:0:0,-31.9092,-340.041	0/0:88:88,0:88:3115:0:0:0,-26.4906,-280.576	0/0:59:59,0:59:2120:0:0:0,-17.7608,-191.068	0/1:94:60,33:60:2136:33:1188:-79.0175,0,-164.3	0/1:27:17,10:17:608:10:360:-24.6165,0,-46.9242	0/0:74:74,0:74:2635:0:0:0,-22.2762,-237.397	0/0:23:23,0:23:816:0:0:0,-6.92369,-73.7617	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	0/1:56:35,21:35:1252:21:756:-51.0709,0,-96.1274	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:18:9,9:9:324:9:324:-24.0873,0,-24.0873	0/1:46:27,19:27:951:19:679:-47.5911,0,-72.0569	0/1:34:16,18:16:572:18:644:-48.0474,0,-41.5784	0/0:107:105,2:105:3750:2:72:0,-25.3735,-330.863	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:138:138,0:138:4911:0:0:0,-41.5421,-442.144	0/1:91:52,39:52:1852:39:1387:-97.7335,0,-139.566	0/0:60:55,5:55:1980:5:180:0,-1.50973,-161.922	0/0:39:39,0:39:1388:0:0:0,-11.7402,-125.219	0/1:71:35,36:35:1260:36:1296:-95.5699,0,-92.3324	0/0:68:68,0:68:2444:0:0:0,-20.47,-220.215	0/1:24:12,12:12:419:12:432:-31.9918,0,-30.818	0/0:76:76,0:76:2715:0:0:0,-22.8783,-244.585	0/1:56:33,23:33:1157:23:828:-57.9764,0,-87.5765	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4753	0/0:58:58,0:58:2058:0:0:0,-17.4597,-185.49	0/1:32:13,19:13:460:19:676:-51.5314,0,-32.1024	0/0:104:104,0:104:3707:0:0:0,-31.3071,-333.777	0/0:126:126,0:126:4520:0:0:0,-37.9298,-406.967	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/0:34:34,0:34:1204:0:0:0,-10.235,-108.666	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:36:36,0:36:1283:0:0:0,-10.8371,-115.773	0/1:44:24,20:24:852:20:716:-51.5224,0,-63.7551	0/0:178:178,0:178:6307:0:0:0,-53.5833,-567.728	0/0:98:98,0:98:3508:0:0:0,-29.5009,-315.93	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.866	0/0:55:55,0:55:1955:0:0:0,-16.5566,-176.225	0/1:94:43,51:43:1535:51:1832:-136.864,0,-110.146	0/1:38:22,16:22:771:16:576:-40.7194,0,-58.2712	0/0:59:59,0:59:2074:0:0:0,-17.7608,-186.93	0/0:58:58,0:58:2054:0:0:0,-17.4597,-185.13	0/1:35:22,13:22:784:13:454:-30.6032,0,-60.3479	0/1:92:45,47:45:1595:47:1684:-123.831,0,-116.144	0/1:43:19,24:19:676:24:860:-64.7682,0,-48.2237	0/0:65:64,1:64:2280:1:36:0,-15.9687,-201.864	0/0:66:66,0:66:2340:0:0:0,-19.868,-210.86
chr02	15261668	.	T	C	16729.5	PASS	AB=0.463556;ABP=28.9676;AC=40;AF=0.212766;AN=188;AO=1051;CIGAR=1X;DP=5398;DPB=5398;DPRA=1.05161;EPP=2285.23;EPPR=9438.06;GTI=1;LEN=1;MEANALT=1.04444;MQM=59.6403;MQMR=59.9535;NS=94;NUMALT=1;ODDS=0.695686;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=37453;QR=155200;RO=4345;RPL=1051;RPP=2285.23;RPPR=9438.06;RPR=0;RUN=1;SAF=0;SAP=2285.23;SAR=1051;SRF=0;SRP=9438.06;SRR=4345;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:12:12,0:12:413:0:0:0,-3.61236,-37.4978	0/0:78:78,0:78:2761:0:0:0,-23.4803,-248.732	0/1:64:42,22:42:1508:22:784:-51.6098,0,-116.749	0/0:83:83,0:83:2938:0:0:0,-24.9855,-264.652	0/1:44:23,21:23:824:21:744:-54.0344,0,-61.238	0/1:31:23,8:23:824:8:280:-16.2074,0,-65.1514	0/1:52:31,21:31:1116:21:756:-52.7067,0,-85.0981	0/0:84:83,1:83:2953:1:36:0,-21.6882,-262.397	0/0:55:55,0:55:1957:0:0:0,-16.5566,-176.404	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.701	0/1:42:19,23:19:684:23:815:-60.9753,0,-49.2471	0/0:45:45,0:45:1611:0:0:0,-13.5463,-145.279	0/1:57:30,27:30:1072:27:968:-70.2787,0,-79.6053	0/1:56:24,32:24:856:32:1148:-86.6811,0,-60.5034	0/1:37:19,18:19:680:18:644:-47.1479,0,-50.3911	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.411	0/1:43:20,23:20:720:23:807:-59.9872,0,-52.1836	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.264	0/1:141:93,48:93:3313:48:1709:-111.645,0,-255.943	0/1:64:42,22:42:1489:22:792:-52.2252,0,-115.037	0/0:59:59,0:59:2105:0:0:0,-17.7608,-189.717	0/0:18:18,0:18:625:0:0:0,-5.41854,-56.5725	0/0:28:27,1:27:972:1:36:0,-4.83056,-84.195	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:180:180,0:180:6418:0:0:0,-54.1854,-577.707	0/0:93:93,0:93:3305:0:0:0,-27.9958,-297.478	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:77:47,30:47:1672:30:1076:-73.9712,0,-127.576	0/1:76:50,26:50:1792:26:932:-61.316,0,-138.684	0/1:48:18,29:18:636:29:1025:-78.0322,0,-43.0604	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.852	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:33:13,20:13:464:20:716:-54.8328,0,-32.1635	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:163:70,93:70:2516:93:3310:-249.019,0,-177.623	0/1:107:50,57:50:1765:57:2044:-152.021,0,-126.921	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/1:10:8,2:8:284:2:72:-3.82642,0,-22.8931	0/0:98:98,0:98:3500:0:0:0,-29.5009,-315.211	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/1:51:30,21:30:1076:21:741:-51.6582,0,-81.8003	0/1:28:15,13:15:540:13:464:-33.6687,0,-40.5077	0/1:38:19,19:19:680:19:667:-48.9152,0,-50.09	0/0:67:67,0:67:2388:0:0:0,-20.169,-215.178	0/1:85:35,50:35:1256:50:1777:-134.614,0,-87.7577	0/0:106:106,0:106:3796:0:0:0,-31.9092,-341.838	0/0:89:89,0:89:3161:0:0:0,-26.7917,-284.715	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/1:93:59,33:59:2116:33:1180:-78.4526,0,-162.654	0/1:27:17,10:17:608:10:360:-24.6165,0,-46.9242	0/0:73:73,0:73:2616:0:0:0,-21.9752,-235.688	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9522	0/1:12:4,8:4:144:8:284:-22.291,0,-9.70126	0/1:57:36,21:36:1288:21:741:-49.8488,0,-98.574	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:18:8,10:8:288:10:356:-26.9627,0,-20.8489	0/1:45:25,20:25:896:20:720:-51.5806,0,-67.414	0/1:33:16,17:16:576:17:612:-45.4712,0,-42.241	0/0:107:106,1:106:3804:1:36:0,-28.6119,-338.959	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:133:133,0:133:4716:0:0:0,-40.037,-424.596	0/1:91:53,38:53:1888:38:1356:-94.9458,0,-142.805	0/0:56:52,4:52:1872:4:140:0,-3.9131,-155.815	0/0:39:39,0:39:1384:0:0:0,-11.7402,-124.859	0/1:71:36,35:36:1292:35:1241:-90.6193,0,-95.2106	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.692	0/1:25:12,13:12:428:13:468:-34.9293,0,-31.3331	0/0:80:80,0:80:2826:0:0:0,-24.0824,-254.566	0/1:57:34,23:34:1205:23:820:-56.9587,0,-91.5952	0/0:24:24,0:24:841:0:0:0,-7.22472,-76.0054	0/0:60:60,0:60:2160:0:0:0,-18.0618,-194.667	0/1:30:11,19:11:392:19:680:-52.4901,0,-26.5892	0/0:101:101,0:101:3620:0:0:0,-30.404,-325.949	0/0:127:126,1:126:4520:1:36:0,-34.6325,-403.368	0/0:60:60,0:60:2140:0:0:0,-18.0618,-192.868	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:35:35,0:35:1248:0:0:0,-10.536,-112.625	0/1:42:22,20:22:792:20:705:-51.1295,0,-58.9624	0/0:180:180,0:180:6402:0:0:0,-54.1854,-576.267	0/0:97:97,0:97:3480:0:0:0,-29.1999,-313.411	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.749	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/1:93:41,52:41:1476:52:1868:-140.403,0,-105.14	0/1:39:23,16:23:824:16:572:-40.0569,0,-62.7431	0/0:60:60,0:60:2143:0:0:0,-18.0618,-193.137	0/0:58:58,0:58:2084:0:0:0,-17.4597,-187.83	0/1:35:22,13:22:792:13:443:-29.6104,0,-61.0696	0/1:91:45,46:45:1616:46:1640:-120.364,0,-118.336	0/1:44:20,24:20:720:24:852:-63.7471,0,-51.8835	0/0:64:64,0:64:2270:0:0:0,-19.2659,-204.559	0/0:65:65,0:65:2331:0:0:0,-19.5669,-210.049
chr02	15261718	.	G	A	86666.1	PASS	AB=0.485149;ABP=22.8748;AC=40;AF=0.212766;AN=188;AO=5063;CIGAR=1X;DP=23324;DPB=23324;DPRA=1.30476;EPP=10997.2;EPPR=39630.2;GTI=0;LEN=1;MEANALT=1.03571;MQM=37.9082;MQMR=57.2435;NS=94;NUMALT=1;ODDS=13.9194;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180149;QR=647258;RO=18257;RPL=1300;RPP=2604.82;RPPR=6122.66;RPR=3763;RUN=1;SAF=1300;SAP=2604.82;SAR=3763;SRF=5544;SRP=6115.84;SRR=12713;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:66:66,0:66:2339:0:0:0,-19.868,-210.407	0/0:208:208,0:208:7405:0:0:0,-62.6142,-666.106	0/1:190:93,97:93:3311:97:3421:-201.724,0,-240.312	0/0:255:255,0:255:9105:0:0:0,-76.7626,-818.666	0/1:110:58,52:58:2058:52:1848:-122.927,0,-151.98	0/1:84:50,34:50:1788:34:1212:-71.9311,0,-135.842	0/1:134:76,58:76:2687:58:2072:-134.361,0,-201.674	0/0:288:287,1:287:10180:1:36:0,-83.2159,-911.135	0/0:141:141,0:141:4920:0:0:0,-42.4452,-442.379	0/0:157:157,0:157:5552:0:0:0,-47.2617,-499.694	0/0:490:489,0:489:17310:0:0:0,-147.204,-1554.93	0/1:158:75,83:75:2651:83:2965:-178.136,0,-191.108	0/0:120:120,0:120:4232:0:0:0,-36.1236,-380.716	0/1:123:47,76:47:1658:76:2692:-184.089,0,-112.068	0/1:98:48,50:48:1690:50:1771:-116.674,0,-122.783	0/1:101:58,43:58:2063:43:1499:-90.2748,0,-155.363	0/0:104:104,0:104:3663:0:0:0,-31.3071,-329.758	0/1:77:28,49:28:995:49:1752:-125.453,0,-66.5512	0/0:195:195,0:195:6945:0:0:0,-58.7008,-623	0/1:211:116,95:116:4091:95:3378:-224.088,0,-304.846	0/1:218:111,107:111:3923:107:3783:-246.467,0,-287.344	0/0:152:152,0:152:5390:0:0:0,-45.7566,-485.158	0/0:147:144,3:144:5126:3:108:0,-35.1912,-452.18	0/0:130:120,10:120:4274:10:360:0,-7.02407,-352.453	0/0:127:127,0:127:4506:0:0:0,-38.2308,-404.848	0/0:289:288,1:288:10215:1:36:0,-83.3994,-914.516	0/0:268:268,0:268:9528:0:0:0,-80.676,-856.586	0/0:41:41,0:41:1408:0:0:0,-12.3422,-126.985	0/1:254:122,132:122:4315:132:4707:-320.493,0,-312.038	0/1:201:131,70:131:4656:70:2500:-152.194,0,-358.509	0/1:157:74,83:74:2640:83:2988:-204.269,0,-190.439	0/0:697:697,0:697:24776:0:0:0,-209.818,-2224.79	0/0:799:799,0:799:28372:0:0:0,-240.523,-2548.27	0/0:544:541,2:541:19234:2:72:0,-158.494,-1718.15	0/1:1163:579,584:579:20540:584:20777:-1084.87,0,-1492.39	0/0:989:987,2:987:35052:2:72:0,-292.52,-3137.46	0/1:267:122,145:122:4243:145:5151:-351.652,0,-301.668	0/1:145:81,64:81:2896:64:2288:-148.769,0,-217.167	0/0:374:373,1:373:13263:1:36:0,-109.105,-1186.46	0/1:287:140,147:140:4974:147:5251:-296.11,0,-360.267	0/0:226:226,0:226:8027:0:0:0,-68.0328,-722.031	0/0:180:180,0:180:6368:0:0:0,-54.1854,-571.672	0/1:219:114,105:114:4065:105:3748:-227.754,0,-299.999	0/1:97:48,49:48:1712:49:1743:-119.535,0,-125.096	0/1:83:38,45:38:1322:45:1563:-105.146,0,-94.2879	0/0:152:152,0:152:5400:0:0:0,-45.7566,-486.041	0/1:136:73,63:73:2597:63:2221:-140.14,0,-192.533	0/0:238:237,1:237:8372:1:32:0,-68.4458,-749.445	0/0:121:121,0:121:4277:0:0:0,-36.4246,-384.965	0/0:248:248,0:248:8780:0:0:0,-74.6554,-789.3	0/1:141:98,43:98:3491:43:1519:-85.0201,0,-271.853	0/1:556:287,269:287:10236:269:9588:-557.952,0,-753.017	0/0:151:150,1:150:5318:1:36:0,-41.8573,-473.113	0/0:84:84,0:84:2957:0:0:0,-25.2865,-266.3	0/1:339:191,148:191:6764:148:5267:-264.803,0,-503.826	0/1:172:97,75:97:3396:75:2683:-165.1,0,-253.143	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.399	0/1:541:260,281:260:9207:281:9995:-619.434,0,-665.333	0/1:623:273,350:273:9618:350:12505:-800.74,0,-677.309	0/1:125:75,50:75:2647:50:1776:-106.637,0,-200.378	0/0:157:156,1:156:5496:1:36:0,-44.2072,-491.608	0/0:415:415,0:415:14710:0:0:0,-124.927,-1322.55	0/0:212:212,0:212:7524:0:0:0,-63.8184,-677.149	0/1:204:119,85:119:4186:85:3007:-192.364,0,-314.254	0/0:98:94,4:94:3352:4:140:0,-17.582,-289.778	0/0:102:102,0:102:3606:0:0:0,-30.7051,-324.494	0/1:155:75,80:75:2663:80:2861:-192.789,0,-193.208	0/0:219:219,0:219:7781:0:0:0,-65.9256,-699.906	0/1:661:379,282:379:13462:282:9999:-534.73,0,-1010.29	0/0:84:83,0:83:2937:0:0:0,-24.9855,-264.017	0/1:111:52,59:52:1847:59:2112:-149.831,0,-133.095	0/0:732:732,0:732:26006:0:0:0,-220.354,-2337.2	0/0:91:91,0:91:3208:0:0:0,-27.3937,-288.542	0/1:122:62,60:62:2220:60:2156:-134.07,0,-162.866	0/0:242:241,1:241:8592:1:36:0,-69.251,-768.3	0/0:205:204,1:204:7264:1:36:0,-58.6566,-650.652	0/0:196:196,0:196:6940:0:0:0,-59.0019,-623.946	0/0:180:180,0:180:6376:0:0:0,-54.1854,-573.469	0/0:903:902,1:902:32047:1:36:0,-269.094,-2873.6	0/0:145:144,1:144:5072:1:36:0,-40.9131,-453.656	0/1:146:79,67:79:2816:67:2351:-156.88,0,-209.649	0/0:172:172,0:172:6099:0:0:0,-51.7772,-548.933	0/0:125:125,0:125:4405:0:0:0,-37.6287,-395.951	0/0:139:139,0:139:4912:0:0:0,-41.8432,-441.635	0/0:95:95,0:95:3290:0:0:0,-28.5978,-296.298	0/1:217:97,120:97:3443:120:4245:-294.907,0,-244.459	0/1:40:20,20:20:693:20:711:-49.9326,0,-50.5146	0/0:86:86,0:86:3032:0:0:0,-25.8886,-272.131	0/0:118:118,0:118:4122:0:0:0,-35.5215,-369.648	0/1:558:312,245:312:11042:245:8749:-476.379,0,-824.089	0/1:1027:548,479:548:19442:479:17078:-948.961,0,-1437.15	0/1:119:32,87:32:1140:87:3073:-218.61,0,-67.0113	0/0:74:73,1:73:2612:1:36:0,-18.6779,-231.719	0/0:142:142,0:142:4925:0:0:0,-42.7463,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chr02	15261746	.	T	C	62374.7	PASS	AB=0.486448;ABP=15.3699;AC=40;AF=0.212766;AN=188;AO=3787;CIGAR=1X;DP=16748;DPB=16748;DPRA=1.98613;EPP=572.977;EPPR=3674.65;GTI=0;LEN=1;MEANALT=1.01961;MQM=30.4156;MQMR=55.9197;NS=94;NUMALT=1;ODDS=0.882105;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=135401;QR=464780;RO=12959;RPL=1395;RPP=572.977;RPPR=3668.38;RPR=2392;RUN=1;SAF=0;SAP=8226.38;SAR=3787;SRF=2;SRP=28125.8;SRR=12957;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:49:49,0:49:1745:0:0:0,-14.7505,-156.975	0/0:72:72,0:72:2592:0:0:0,-21.6742,-232.872	0/1:123:58,65:58:2084:65:2327:-122.471,0,-150.077	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.098	0/1:37:19,18:19:684:18:648:-35.7146,0,-50.3526	0/1:35:19,16:19:684:16:576:-29.1389,0,-51.2857	0/1:56:32,24:32:1148:24:849:-48.0287,0,-86.7084	0/0:100:100,0:100:3585:0:0:0,-30.103,-322.078	0/0:79:79,0:79:2832:0:0:0,-23.7814,-254.37	0/0:62:62,0:62:2232:0:0:0,-18.6639,-200.838	0/0:465:464,1:464:16672:1:36:0,-136.43,-1494.28	0/1:100:45,55:45:1620:55:1963:-105.338,0,-115.43	0/0:59:59,0:59:2124:0:0:0,-17.7608,-190.61	0/1:64:30,34:30:1076:34:1215:-68.9858,0,-77.2495	0/1:50:25,25:25:885:25:900:-52.7578,0,-64.8147	0/1:66:43,23:43:1548:23:828:-39.7947,0,-119.478	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.399	0/1:22:10,12:10:360:12:432:-23.2019,0,-25.9843	0/0:174:174,0:174:6244:0:0:0,-52.3792,-559.603	0/1:68:37,31:37:1317:31:1097:-63.1093,0,-98.2738	0/1:97:50,47:50:1796:47:1688:-92.7901,0,-132.507	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.434	0/0:46:44,2:44:1584:2:72:0,-8.04376,-136.834	0/0:53:52,1:52:1872:1:36:0,-13.0518,-165.579	0/0:73:73,0:73:2609:0:0:0,-21.9752,-234.521	0/0:91:91,0:91:3272:0:0:0,-27.3937,-293.541	0/0:150:149,0:149:5347:0:0:0,-44.8535,-478.805	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.3871	0/1:113:44,69:44:1580:69:2465:-159.604,0,-108.446	0/1:70:50,20:50:1800:20:716:-31.2131,0,-140.942	0/1:52:23,29:23:824:29:1036:-60.683,0,-58.7125	0/0:702:701,1:701:25115:1:36:0,-207.802,-2249.83	0/0:810:810,0:810:29009:0:0:0,-243.834,-2604.51	0/0:563:560,3:560:20086:3:108:0,-161.124,-1788.93	0/1:1189:587,602:587:21046:602:21515:-1121.99,0,-1529.04	0/0:1004:1001,3:1001:35933:3:108:0,-293.878,-3210.14	0/1:126:52,74:52:1868:74:2646:-169.528,0,-129.964	0/1:52:30,22:30:1080:22:777:-41.1884,0,-81.8001	0/0:348:348,0:348:12497:0:0:0,-104.758,-1118.69	0/1:287:143,144:143:5136:144:5176:-289.299,0,-373.946	0/0:46:46,0:46:1656:0:0:0,-13.8474,-148.284	0/0:163:163,0:163:5860:0:0:0,-49.0679,-525.812	0/1:120:49,71:49:1764:71:2552:-149.546,0,-122.771	0/1:34:17,17:17:612:17:612:-36.8049,0,-45.028	0/1:40:14,26:14:504:26:932:-59.3472,0,-33.6516	0/0:95:95,0:95:3412:0:0:0,-28.5978,-307.202	0/1:50:26,24:26:936:24:864:-44.3241,0,-69.3179	0/0:79:79,0:79:2831:0:0:0,-23.7814,-254.237	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.055	0/0:71:71,0:71:2533:0:0:0,-21.3731,-227.28	0/1:78:50,28:50:1792:28:1008:-56.9092,0,-137.996	0/1:552:286,266:286:10284:266:9467:-549.382,0,-757.744	0/0:72:72,0:72:2580:0:0:0,-21.6742,-230.387	0/0:43:43,0:43:1514:0:0:0,-12.9443,-136.503	0/1:337:195,142:195:7004:142:5073:-247.761,0,-525.666	0/1:86:47,39:47:1692:39:1404:-75.5753,0,-125.729	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.8974	0/1:534:258,276:258:9219:276:9867:-609.065,0,-668.26	0/1:601:263,338:263:9406:338:12080:-770.708,0,-663.627	0/1:73:46,27:46:1648:27:972:-48.2502,0,-125.917	0/0:86:85,1:85:3060:1:36:0,-22.834,-272.397	0/0:417:417,0:417:14937:0:0:0,-125.53,-1341.82	0/0:51:51,0:51:1836:0:0:0,-15.3525,-165.238	0/1:79:46,33:46:1656:33:1188:-65.1122,0,-125.424	0/0:47:45,2:45:1616:2:72:0,-8.63316,-140.006	0/0:31:31,0:31:1108:0:0:0,-9.33193,-99.8604	0/1:54:17,37:17:612:37:1309:-83.9489,0,-39.151	0/0:147:147,0:147:5280:0:0:0,-44.2514,-474.94	0/1:657:379,277:379:13609:277:9856:-518.59,0,-1023.35	0/0:44:44,0:44:1584:0:0:0,-13.2453,-141.7	0/1:32:13,19:13:464:19:684:-44.3857,0,-32.4641	0/0:728:728,0:728:26030:0:0:0,-219.15,-2338.98	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.444	0/1:77:43,34:43:1544:34:1220:-61.35,0,-115.927	0/0:140:140,0:140:5020:0:0:0,-42.1442,-451.471	0/0:61:60,1:60:2130:1:36:0,-15.3083,-188.833	0/0:66:66,0:66:2376:0:0:0,-19.868,-213.379	0/0:70:70,0:70:2512:0:0:0,-21.0721,-225.937	0/0:925:923,2:923:33041:2:72:0,-272.547,-2954.49	0/0:57:56,1:56:2016:1:36:0,-14.4225,-178.687	0/1:40:24,16:24:864:16:576:-27.3702,0,-65.0198	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.745	0/0:48:48,0:48:1724:0:0:0,-14.4494,-154.749	0/0:82:82,0:82:2948:0:0:0,-24.6845,-264.913	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.203	0/1:91:42,49:42:1512:49:1747:-107.081,0,-108.726	0/1:11:9,2:9:324:2:72:-1.88745,0,-26.045	0/0:28:28,0:28:1004:0:0:0,-8.42884,-89.0522	0/0:54:54,0:54:1936:0:0:0,-16.2556,-172.726	0/1:545:308,237:308:11056:237:8524:-454.993,0,-826.672	0/1:982:527,455:527:18944:455:16249:-884.709,0,-1403.37	0/1:68:22,46:22:788:46:1643:-104.194,0,-50.6728	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5469	0/0:69:69,0:69:2476:0:0:0,-20.7711,-222.819
chr02	15261914	.	T	A	355177	PASS	AB=0.541022;ABP=104.024;AC=147;AF=0.781915;AN=188;AO=13050;CIGAR=1X;DP=16263;DPB=16263;DPRA=0;EPP=28332;EPPR=6966.92;GTI=1;LEN=1;MEANALT=1.06383;MQM=59.9833;MQMR=59.9981;NS=94;NUMALT=1;ODDS=2.42805;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=463575;QR=112878;RO=3207;RPL=6953;RPP=124.935;RPPR=196.814;RPR=6097;RUN=1;SAF=6952;SAP=124.366;SAR=6098;SRF=1871;SRP=196.814;SRR=1336;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:78:0,78:0:0:78:2775:-249.992,-23.4803,0	1/1:150:0,150:0:0:150:5317:-478.666,-45.1545,0	0/1:319:142,177:142:5021:177:6278:-469.087,0,-356.013	1/1:377:0,377:0:0:377:13418:-1207.42,-113.488,0	0/1:41:19,22:19:676:22:788:-58.9026,0,-48.8258	0/1:61:30,31:30:1071:31:1112:-82.0285,0,-78.3388	0/1:206:83,123:83:2944:123:4383:-332.633,0,-203.181	1/1:325:0,325:0:0:325:11524:-1037.03,-97.8348,0	1/1:207:0,207:0:0:207:7360:-662.452,-62.3132,0	1/1:185:0,185:0:0:185:6539:-588.597,-55.6906,0	1/1:136:0,135:0:0:135:4770:-429.14,-40.6391,0	0/1:204:112,92:112:3931:92:3214:-228.062,0,-292.577	1/1:160:0,160:0:0:160:5654:-508.983,-48.1648,0	0/1:177:88,89:88:3095:89:3146:-230.085,0,-225.496	0/1:127:64,63:64:2170:63:2243:-163.902,0,-157.333	0/1:140:69,71:69:2395:71:2524:-185.266,0,-173.663	1/1:109:0,109:0:0:109:3877:-349.125,-32.8123,0	0/1:82:41,41:41:1450:41:1456:-106.652,0,-106.11	1/1:90:0,90:0:0:90:3169:-285.42,-27.0927,0	0/1:426:197,229:197:6941:229:8100:-600.784,0,-496.528	0/1:261:127,134:127:4465:134:4777:-351.518,0,-323.458	1/1:202:0,202:0:0:202:7223:-650.122,-60.8081,0	1/1:199:0,199:0:0:199:7042:-633.846,-59.905,0	0/1:124:21,103:21:721:103:3649:-291.286,0,-27.8788	1/1:141:0,141:0:0:141:5004:-450.508,-42.4452,0	1/1:447:1,446:1:36:446:15872:-1424.51,-130.962,0	1/1:443:1,442:1:32:442:15723:-1411.57,-130.157,0	1/1:58:0,58:0:0:58:2044:-184.23,-17.4597,0	0/1:532:238,294:238:8417:294:10446:-779.918,0,-597.397	0/1:277:106,171:106:3761:171:6078:-463.738,0,-255.305	0/1:182:97,85:97:3436:85:3011:-216.435,0,-254.666	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:13:0,13:0:0:13:460:-41.7354,-3.91339,0	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	0/1:12:3,9:3:108:9:324:-25.8935,0,-6.46281	1/1:11:0,11:0:0:11:383:-34.8032,-3.31133,0	0/1:361:147,212:147:5114:212:7508:-567.339,0,-351.984	0/1:97:49,48:49:1727:48:1712:-125.166,0,-126.514	1/1:102:0,102:0:0:102:3617:-325.737,-30.7051,0	0/1:7:4,3:4:144:3:104:-7.5956,0,-11.2064	1/1:261:0,261:0:0:261:9312:-838.048,-78.5688,0	1/1:40:0,40:0:0:40:1418:-127.916,-12.0412,0	0/1:251:120,131:120:4235:131:4639:-342.117,0,-305.774	0/1:140:66,74:66:2325:74:2617:-193.633,0,-167.365	0/1:109:46,63:46:1610:63:2232:-168.33,0,-112.375	1/1:196:0,196:0:0:196:6995:-629.616,-59.0019,0	0/1:183:67,116:67:2367:116:4118:-315.718,0,-158.2	1/1:336:12,324:12:428:324:11530:-998.72,-62.2873,0	1/1:159:0,159:0:0:159:5646:-508.262,-47.8638,0	1/1:225:0,225:0:0:225:7946:-715.169,-67.7318,0	0/1:185:86,99:86:3054:99:3511:-260.511,0,-219.399	0/1:6:2,4:2:72:4:139:-11.046,0,-5.03054	1/1:223:0,223:0:0:223:7939:-714.537,-67.1297,0	1/1:174:0,174:0:0:174:6211:-559.084,-52.3792,0	0/1:18:13,5:13:464:5:180:-11.1335,0,-36.679	0/1:234:109,125:109:3846:125:4446:-329.859,0,-275.899	1/1:82:0,82:0:0:82:2914:-262.495,-24.6845,0	0/1:17:10,7:10:360:7:243:-17.09,0,-27.6268	0/1:33:16,17:16:572:17:600:-44.3946,0,-41.8794	0/1:161:82,79:82:2888:79:2809:-204.584,0,-211.691	1/1:202:2,200:2:72:200:7097:-631.687,-53.9713,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:336:1,334:1:36:334:11876:-1065.11,-97.6066,0	0/1:235:105,130:105:3699:130:4616:-344.864,0,-262.372	1/1:117:7,110:7:248:110:3928:-331.049,-12.5563,0	1/1:163:0,163:0:0:163:5801:-522.204,-49.0679,0	0/1:329:146,183:146:5165:183:6493:-485.417,0,-365.954	1/1:401:4,396:4:144:396:14102:-1254.62,-107.458,0	0/1:109:48,61:48:1694:61:2157:-161.584,0,-119.932	1/1:80:1,79:1:36:79:2828:-251.161,-20.4841,0	0/1:88:51,37:51:1807:37:1324:-92.9715,0,-136.42	1/1:33:0,33:0:0:33:1150:-103.802,-9.93399,0	1/1:163:0,163:0:0:163:5744:-517.078,-49.0679,0	0/1:129:58,71:58:2034:71:2538:-189.839,0,-144.498	1/1:339:0,339:0:0:339:12042:-1083.41,-102.049,0	1/1:319:1,318:1:36:318:11339:-1016.79,-92.4303,0	1/1:110:0,110:0:0:110:3853:-346.964,-33.1133,0	1/1:299:0,299:0:0:299:10665:-959.76,-90.008,0	1/1:20:0,20:0:0:20:705:-63.7728,-6.0206,0	1/1:177:0,177:0:0:177:6288:-566.017,-53.2823,0	0/1:269:126,143:126:4429:143:5044:-373.133,0,-317.809	1/1:320:0,320:0:0:320:11413:-1027.05,-96.3296,0	1/1:107:2,104:2:72:104:3694:-325.829,-25.4347,0	1/1:190:1,189:1:36:189:6683:-597.955,-53.5974,0	1/1:92:0,92:0:0:92:3255:-293.171,-27.6948,0	0/1:266:133,133:133:4650:133:4739:-346.596,0,-338.594	0/1:49:24,25:24:836:25:887:-65.3976,0,-60.807	1/1:144:0,144:0:0:144:5147:-463.372,-43.3483,0	1/1:153:0,153:0:0:153:5416:-487.575,-46.0576,0	0/1:106:43,63:43:1518:63:2251:-170.943,0,-105.002	0/1:236:103,133:103:3586:133:4736:-355.356,0,-251.907	0/1:122:79,43:79:2764:43:1536:-101.807,0,-212.277	1/1:198:0,198:0:0:198:7055:-635.01,-59.6039,0	1/1:211:4,207:4:140:207:7348:-648.43,-50.5728,0
chr02	15752606	.	AACACAA	CACACAG,CATACAG	172175	PASS	AB=0.549615,0.442308;ABP=58.6033,78.1767;AC=161,27;AF=0.856383,0.143617;AN=188;AO=7995,1159;CIGAR=1X5M1X,1X1M1X3M1X;DP=9217;DPB=9435.29;DPRA=0,1.20153;EPP=16872.4,2519.75;EPPR=0;GTI=2;LEN=7,7;MEANALT=1.85106,2.625;MQM=37.3134,24.5246;MQMR=0;NS=94;NUMALT=2;ODDS=4.44176;PAIRED=0,0;PAIREDR=0;PAO=763.5,763.5;PQA=26685,26685;PQR=0;PRO=1;QA=278743,41033;QR=0;RO=0;RPL=7938,1159;RPP=16872.4,2519.75;RPPR=0;RPR=57,0;RUN=1,1;SAF=0,0;SAP=17363.9,2519.75;SAR=7995,1159;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:97:0,96,0:0:0:96,0:3231,0:-266.286,-28.8989,0,-266.286,-28.8989,-266.286	1/1:103:0,103,0:0:0:103,0:3465,0:-285.264,-31.0061,0,-285.264,-31.0061,-285.264	1/1:195:0,195,0:0:0:195,0:6575,0:-540.755,-58.7009,0,-540.755,-58.7009,-540.755	1/1:162:0,160,0:0:0:160,0:5653,0:-483.011,-48.1648,0,-483.011,-48.1648,-483.011	1/2:67:0,49,18:0:0:49,18:1741,635:-162.947,-31.6477,-16.8973,-131.554,0,-126.136	1/1:12:0,12,0:0:0:12,0:395,0:-33.0748,-3.61236,0,-33.0748,-3.61236,-33.0748	1/2:133:0,57,75:0:0:57,75:2027,2670:-299.527,-143.219,-126.061,-156.404,0,-133.826	1/1:107:0,107,0:0:0:107,0:3568,0:-294.721,-32.2102,0,-294.721,-32.2102,-294.721	1/1:157:0,156,0:0:0:156,0:5262,0:-432.768,-46.9607,0,-432.768,-46.9607,-432.768	1/1:73:0,72,0:0:0:72,0:2543,0:-217.413,-21.6742,0,-217.413,-21.6742,-217.413	1/1:64:0,63,0:0:0:63,0:2232,0:-191.314,-18.9649,0,-191.314,-18.9649,-191.314	1/1:55:0,55,0:0:0:55,0:1864,0:-153.532,-16.5567,0,-153.532,-16.5567,-153.532	1/1:107:0,107,0:0:0:107,0:3569,0:-294.292,-32.2102,0,-294.292,-32.2102,-294.292	1/2:63:0,37,26:0:0:37,26:1290,931:-142.999,-45.6988,-34.5607,-97.5687,0,-89.742	1/2:91:0,50,40:0:0:50,40:1761,1436:-212.139,-76.764,-61.7125,-135.438,0,-123.397	1/2:68:0,28,40:0:0:28,40:997,1422:-145.147,-70.0941,-61.6652,-75.3417,0,-63.3005	1/1:49:0,49,0:0:0:49,0:1639,0:-134.704,-14.7505,0,-134.704,-14.7505,-134.704	1/1:13:0,13,0:0:0:13,0:442,0:-36.5689,-3.91339,0,-36.5689,-3.91339,-36.5689	1/1:41:0,41,0:0:0:41,0:1384,0:-113.923,-12.3422,0,-113.923,-12.3422,-113.923	1/2:253:0,161,92:0:0:161,92:5673,3279:-612.688,-175.781,-127.315,-437.126,0,-409.431	1/2:177:0,124,50:0:0:124,50:4385,1763:-417.765,-87.2112,-49.8834,-330.573,0,-315.522	1/1:108:0,107,0:0:0:107,0:3807,0:-327.094,-32.2102,0,-327.094,-32.2102,-327.094	1/1:152:0,152,0:0:0:152,0:5412,0:-463.169,-45.7566,0,-463.169,-45.7566,-463.169	1/1:125:0,124,1:0:0:124,1:4403,36:-369.602,-37.3277,0,-367.853,-35.3499,-367.552	1/1:88:0,88,0:0:0:88,0:3094,0:-260.182,-26.4906,0,-260.182,-26.4906,-260.182	1/1:168:0,168,0:0:0:168,0:5976,0:-495.602,-50.573,0,-495.602,-50.573,-495.602	1/1:385:0,383,1:0:0:383,1:13563,36:-1137.02,-115.294,0,-1135.27,-113.61,-1134.97	1/1:42:0,42,0:0:0:42,0:1478,0:-124.283,-12.6433,0,-124.283,-12.6433,-124.283	1/2:235:0,135,99:0:0:135,99:4748,3494:-563.932,-193.114,-152.475,-353.068,0,-323.266	1/2:90:0,35,51:0:0:35,51:1216,1796:-180.239,-89.0014,-78.4654,-91.307,0,-75.9545	1/2:84:0,53,29:0:0:53,29:1878,1003:-199.888,-54.9048,-38.9502,-144.98,0,-136.25	1/1:9:0,9,0:0:0:9,0:320,0:-27.1966,-2.70927,0,-27.1966,-2.70927,-27.1966	1/1:43:0,43,0:0:0:43,0:1480,0:-123.93,-12.9443,0,-123.93,-12.9443,-123.93	1/1:8:0,8,0:0:0:8,0:270,0:-22.6064,-2.40824,0,-22.6064,-2.40824,-22.6064	1/1:14:0,14,0:0:0:14,0:474,0:-39.257,-4.21442,0,-39.257,-4.21442,-39.257	1/1:19:0,19,0:0:0:19,0:626,0:-51.7345,-5.71957,0,-51.7345,-5.71957,-51.7345	1/1:220:0,215,0:0:0:215,0:7652,0:-662.739,-64.7215,0,-662.739,-64.7215,-662.739	1/1:118:0,118,0:0:0:118,0:4195,0:-352.091,-35.5215,0,-352.091,-35.5215,-352.091	1/1:52:0,52,0:0:0:52,0:1752,0:-144.252,-15.6536,0,-144.252,-15.6536,-144.252	1/2:14:0,11,2:0:0:11,2:383,67:-32.5049,-3.46642,-0.155092,-29.0563,0,-28.4542	1/1:100:0,98,0:0:0:98,0:3477,0:-291.944,-29.5009,0,-291.944,-29.5009,-291.944	1/1:52:0,52,0:0:0:52,0:1834,0:-153.678,-15.6536,0,-153.678,-15.6536,-153.678	1/2:126:0,60,66:0:0:60,66:2104,2343:-273.58,-115.478,-97.4162,-158.382,0,-138.514	1/2:78:0,42,36:0:0:42,36:1466,1281:-181.212,-69.1915,-56.5482,-112.306,0,-101.469	1/2:71:0,38,33:0:0:38,33:1338,1179:-166.346,-63.5044,-52.0653,-103.128,0,-93.1944	1/1:163:0,162,0:0:0:162,0:5704,0:-489.999,-48.7669,0,-489.999,-48.7669,-489.999	1/1:57:0,56,0:0:0:56,0:1888,0:-155.167,-16.8577,0,-155.167,-16.8577,-155.167	1/1:164:0,156,3:0:0:156,3:5468,108:-468.584,-46.9607,0,-462.828,-41.1951,-461.925	1/1:117:0,115,0:0:0:115,0:4074,0:-348.716,-34.6185,0,-348.716,-34.6185,-348.716	1/1:108:0,108,0:0:0:108,0:3829,0:-328.462,-32.5112,0,-328.462,-32.5112,-328.462	1/1:172:0,168,0:0:0:168,0:5938,0:-515.212,-50.573,0,-515.212,-50.573,-515.212	1/2:10:0,4,6:0:0:4,6:144,213:-22.8969,-11.7376,-10.5335,-11.4632,0,-9.65703	1/1:130:0,130,0:0:0:130,0:4383,0:-360.236,-39.1339,0,-360.236,-39.1339,-360.236	1/1:71:0,71,0:0:0:71,0:2515,0:-216.208,-21.3731,0,-216.208,-21.3731,-216.208	1/1:8:0,8,0:0:0:8,0:272,0:-22.6231,-2.40824,0,-22.6231,-2.40824,-22.6231	1/2:151:0,88,59:0:0:88,59:3105,2058:-336.891,-103.444,-76.9537,-233.501,0,-215.74	1/1:79:0,78,0:0:0:78,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chr02	15911951	.	TAAA	TAAG,CAAG	207225	PASS	AB=0.516045,0.480026;ABP=9.83899,13.5932;AC=154,34;AF=0.819149,0.180851;AN=188;AO=7935,1474;CIGAR=3M1X,1X2M1X;DP=9437;DPB=9436.75;DPRA=0,0.970955;EPP=17225,3203.76;EPPR=9.52472;GTI=1;LEN=1,4;MEANALT=1.65957,2.30769;MQM=59.6044,53.5366;MQMR=60;NS=94;NUMALT=2;ODDS=4.84628;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=283967,51863;QR=96;RO=3;RPL=7934,1474;RPP=17225,3203.76;RPPR=9.52472;RPR=1,0;RUN=1,1;SAF=7935,1474;SAP=17233.6,3203.76;SAR=0,0;SRF=3;SRP=9.52472;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:18:0,18,0:0:0:18,0:648,0:-58.6437,-5.41854,0,-58.6437,-5.41854,-58.6437	1/1:153:0,153,0:0:0:153,0:5479,0:-493.209,-46.0576,0,-493.209,-46.0576,-493.209	1/1:112:0,112,0:0:0:112,0:3982,0:-358.509,-33.7154,0,-358.509,-33.7154,-358.509	1/1:247:1,243,3:1:30:243,3:8713,107:-779.832,-70.7658,0,-771.417,-64.392,-772.912	1/2:128:0,74,54:0:0:74,54:2641,1902:-370.161,-154.916,-132.64,-215.599,0,-199.344	1/2:74:0,39,35:0:0:39,35:1404,1198:-211.783,-97.2617,-85.5215,-114.871,0,-104.335	1/2:106:0,42,64:0:0:42,64:1508,2219:-303.35,-180.335,-167.691,-123.369,0,-104.103	1/1:237:0,237,0:0:0:237,0:8451,0:-760.474,-71.3441,0,-760.474,-71.3441,-760.474	1/1:72:0,71,1:0:0:71,1:2528,36:-227.33,-21.3731,0,-224.401,-18.0849,-224.1	1/1:126:0,126,0:0:0:126,0:4498,0:-404.926,-37.9298,0,-404.926,-37.9298,-404.926	1/1:52:0,51,0:0:0:51,0:1811,0:-162.825,-15.3525,0,-162.825,-15.3525,-162.825	1/2:51:0,30,21:0:0:30,21:1080,738:-147.883,-60.1831,-51.1522,-88.0536,0,-81.732	1/1:52:0,52,0:0:0:52,0:1872,0:-168.516,-15.6536,0,-168.516,-15.6536,-168.516	1/2:55:0,26,29:0:0:26,29:932,1000:-157.004,-80.9878,-73.161,-76.3675,0,-67.6376	1/2:42:0,19,23:0:0:19,23:680,820:-122.55,-67.0976,-61.3781,-55.8096,0,-48.8859	1/2:47:0,23,24:0:0:23,24:824,855:-137.127,-69.9292,-63.0055,-67.555,0,-60.3303	1/1:47:1,46,0:1:36:46,0:1647,0:-144.846,-10.5501,0,-145.147,-13.8474,-148.085	1/2:42:0,25,16:0:0:25,16:900,555:-118.479,-45.0411,-37.5154,-73.4951,0,-68.6786	1/1:44:0,44,0:0:0:44,0:1572,0:-141.772,-13.2453,0,-141.772,-13.2453,-141.772	1/2:226:0,135,91:0:0:135,91:4854,3197:-656.206,-260.228,-219.589,-396.333,0,-368.939	1/2:134:1,72,61:1:30:72,61:2580,2145:-381.061,-170.948,-151.671,-208.07,0,-192.104	1/1:106:0,106,0:0:0:106,0:3787,0:-340.835,-31.9092,0,-340.835,-31.9092,-340.835	1/1:29:0,29,0:0:0:29,0:1040,0:-93.912,-8.72987,0,-93.912,-8.72987,-93.912	1/2:82:0,74,8:0:0:74,8:2656,280:-239.061,-22.9706,-0.69439,-216.44,0,-214.031	1/1:35:0,35,0:0:0:35,0:1260,0:-113.701,-10.5361,0,-113.701,-10.5361,-113.701	1/1:405:0,405,0:0:0:405,0:14529,0:-1306.73,-121.917,0,-1306.73,-121.917,-1306.73	1/1:150:0,149,0:0:0:149,0:5326,0:-479.157,-44.8535,0,-479.157,-44.8535,-479.157	1/1:29:0,29,0:0:0:29,0:1036,0:-93.2358,-8.72987,0,-93.2358,-8.72987,-93.2358	1/2:198:0,101,97:0:0:101,97:3617,3427:-573.752,-279.096,-248.692,-295.011,0,-265.811	1/2:186:0,102,83:0:0:102,83:3640,2919:-533.464,-236.731,-206.026,-296.838,0,-271.853	1/2:135:0,71,64:0:0:71,64:2556,2257:-392.175,-183.621,-162.248,-208.909,0,-189.644	1/1:13:0,13,0:0:0:13,0:468,0:-42.2684,-3.91339,0,-42.2684,-3.91339,-42.2684	1/1:21:0,21,0:0:0:21,0:756,0:-68.3672,-6.32163,0,-68.3672,-6.32163,-68.3672	1/1:15:0,15,0:0:0:15,0:540,0:-48.9237,-4.51545,0,-48.9237,-4.51545,-48.9237	1/2:7:0,2,5:0:0:2,5:72,174:-19.9442,-14.0632,-13.4612,-6.23466,0,-4.72951	1/1:19:0,19,0:0:0:19,0:684,0:-61.8618,-5.71957,0,-61.8618,-5.71957,-61.8618	1/1:173:0,171,0:0:0:171,0:6113,0:-548.758,-51.4761,0,-548.758,-51.4761,-548.758	1/1:247:0,247,0:0:0:247,0:8817,0:-793.166,-74.3544,0,-793.166,-74.3544,-793.166	1/1:46:0,46,0:0:0:46,0:1644,0:-148.232,-13.8474,0,-148.232,-13.8474,-148.232	1/2:5:0,2,3:0:0:2,3:72,108:-15.0328,-9.15779,-8.55573,-6.23466,0,-5.33157	1/1:165:0,165,0:0:0:165,0:5897,0:-530.728,-49.67,0,-530.728,-49.67,-530.728	1/1:30:0,30,0:0:0:30,0:1076,0:-97.134,-9.0309,0,-97.134,-9.0309,-97.134	1/2:206:0,78,128:0:0:78,128:2800,4498:-593.371,-365.073,-341.593,-228.653,0,-190.121	1/2:57:0,29,27:0:0:29,27:1040,963:-163.249,-78.4266,-69.6968,-84.8203,0,-76.6925	1/2:54:0,24,30:0:0:24,30:837,1067:-155.221,-87.1599,-79.9352,-68.4125,0,-59.3816	1/1:98:0,98,0:0:0:98,0:3515,0:-316.534,-29.5009,0,-316.534,-29.5009,-316.534	1/2:185:0,84,100:0:0:84,100:3020,3518:-530.156,-284.109,-258.822,-246.063,0,-215.96	1/1:215:0,215,0:0:0:215,0:7681,0:-690.914,-64.7215,0,-690.914,-64.7215,-690.914	1/1:114:0,111,0:0:0:111,0:3977,0:-357.441,-33.4143,0,-357.441,-33.4143,-357.441	1/1:208:0,208,0:0:0:208,0:7419,0:-667.66,-62.6142,0,-667.66,-62.6142,-667.66	1/1:191:0,189,0:0:0:189,0:6785,0:-610.362,-56.8947,0,-610.362,-56.8947,-610.362	1/2:11:0,5,6:0:0:5,6:180,212:-32.27,-17.582,-16.0768,-15.0445,0,-13.2383	1/1:190:0,190,0:0:0:190,0:6799,0:-611.876,-57.1957,0,-611.876,-57.1957,-611.876	1/1:46:0,46,0:0:0:46,0:1656,0:-149.328,-13.8474,0,-149.328,-13.8474,-149.328	1/2:23:0,13,10:0:0:13,10:468,357:-67.5595,-29.379,-25.4657,-38.538,0,-35.5277	1/2:172:0,80,91:0:0:80,91:2863,3201:-491.646,-259.094,-235.012,-232.56,0,-205.167	1/1:26:0,26,0:0:0:26,0:921,0:-83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chr02	16204836	.	C	T	20933.1	PASS	AB=0.513577;ABP=11.855;AC=32;AF=0.170213;AN=188;AO=2887;CIGAR=1X;DP=17676;DPB=17676;DPRA=1.14015;EPP=6263.37;EPPR=32073.5;GTI=1;LEN=1;MEANALT=1.04762;MQM=25.709;MQMR=42.8496;NS=94;NUMALT=1;ODDS=2.68901;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103444;QR=524929;RO=14781;RPL=2;RPP=6254.69;RPPR=102.517;RPR=2885;RUN=1;SAF=1;SAP=6263.37;SAR=2886;SRF=6976;SRP=103.973;SRR=7805;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:83:83,0:83:2943:0:0:0,-24.9855,-248.479	0/0:292:292,0:292:10412:0:0:0,-87.9008,-730.037	0/0:317:316,1:316:11286:1:36:0,-93.053,-927.589	0/0:363:362,0:362:12898:0:0:0,-108.973,-1047.42	0/1:106:67,39:67:2395:39:1404:-52.2617,0,-156.054	0/1:124:58,66:58:2072:66:2372:-94.9068,0,-113.164	0/1:216:124,92:124:4356:92:3300:-147.989,0,-279.747	0/0:403:403,0:403:14310:0:0:0,-121.315,-1029.68	0/0:182:181,0:181:6417:0:0:0,-54.4864,-531.485	0/0:220:220,0:220:7833:0:0:0,-66.2266,-613.171	0/0:128:128,0:128:4581:0:0:0,-38.5318,-369.628	0/0:213:213,0:213:7507:0:0:0,-64.1194,-590.234	0/0:154:154,0:154:5428:0:0:0,-46.3586,-420.473	0/1:227:95,132:95:3363:132:4728:-224.66,0,-194.971	0/1:177:105,72:105:3721:72:2584:-117.65,0,-251.434	0/1:149:84,65:84:2956:65:2332:-99.4668,0,-194.468	0/0:162:162,0:162:5710:0:0:0,-48.7669,-408.838	0/1:159:64,95:64:2258:95:3384:-141.009,0,-116.973	0/0:95:95,0:95:3391:0:0:0,-28.5978,-256.846	0/1:306:178,128:178:6330:128:4596:-205.375,0,-426.996	0/1:348:181,167:181:6427:167:5996:-257.319,0,-389.779	0/0:262:262,0:262:9312:0:0:0,-78.8699,-801.208	0/0:162:162,0:162:5746:0:0:0,-48.7669,-502.989	0/0:154:147,7:147:5229:7:252:0,-31.2622,-404.09	0/0:158:158,0:158:5641:0:0:0,-47.5627,-453.703	0/0:398:390,5:390:13884:5:180:0,-106.748,-1121.87	0/0:415:414,1:414:14714:1:36:0,-122.369,-1172.4	0/0:92:92,0:92:3265:0:0:0,-27.6948,-253.487	0/1:341:201,140:201:7195:140:5024:-243.971,0,-497.634	0/1:260:83,177:83:2940:177:6349:-307.982,0,-130.904	0/1:192:115,77:115:4095:77:2755:-122.621,0,-274.667	0/0:8:8,0:8:288:0:0:0,-2.40824,-22.3342	0/0:39:39,0:39:1388:0:0:0,-11.7402,-117.243	0/0:14:14,0:14:485:0:0:0,-4.21442,-37.4334	1/1:16:0,16:0:0:16:572:-31.9486,-4.81648,0	0/0:44:44,0:44:1584:0:0:0,-13.2453,-129.67	0/0:427:427,0:427:15123:0:0:0,-128.54,-1245.61	0/0:235:234,1:234:8308:1:36:0,-68.4632,-639.27	0/0:141:141,0:141:5005:0:0:0,-42.4452,-366.979	0/1:5:2,3:2:68:3:108:-5.22521,0,-4.13359	0/0:204:204,0:204:7176:0:0:0,-61.4101,-565.594	0/0:82:82,0:82:2932:0:0:0,-24.6845,-235.042	0/1:285:131,154:131:4651:154:5520:-255.881,0,-278.08	0/1:150:63,87:63:2235:87:3104:-162.348,0,-140.618	0/1:109:61,48:61:2153:48:1724:-80.3742,0,-142.389	0/0:176:176,0:176:6283:0:0:0,-52.9813,-516.555	0/1:227:104,122:104:3724:122:4369:-175.172,0,-214.02	0/0:287:285,2:285:10083:2:72:0,-81.7085,-795.146	0/0:133:133,0:133:4737:0:0:0,-40.037,-387.013	0/0:219:219,0:219:7778:0:0:0,-65.9256,-597.799	0/0:335:335,0:335:11927:0:0:0,-100.845,-995.087	0/1:22:9,13:9:320:13:468:-24.2717,0,-19.8332	0/0:274:274,0:274:9739:0:0:0,-82.4822,-745.809	0/0:94:94,0:94:3317:0:0:0,-28.2968,-283.256	0/1:27:13,14:13:468:14:504:-18.7155,0,-26.3544	0/1:254:129,125:129:4560:125:4484:-200.902,0,-276.1	0/0:50:50,0:50:1770:0:0:0,-15.0515,-144.697	0/1:20:9,11:9:311:11:392:-18.3059,0,-21.2604	0/1:21:7,14:7:252:14:504:-27.4159,0,-13.8505	0/0:176:176,0:176:6282:0:0:0,-52.9813,-506.475	0/0:223:219,4:219:7750:4:144:0,-57.753,-612.507	0/0:12:12,0:12:405:0:0:0,-3.61236,-34.8773	0/0:290:290,0:290:10347:0:0:0,-87.2987,-832.759	0/1:458:182,276:182:6444:276:9908:-500.421,0,-376.429	0/0:127:118,9:118:4214:9:324:0,-18.7792,-303.411	0/0:172:171,0:171:6055:0:0:0,-51.4761,-495.152	0/1:271:142,129:142:5065:129:4628:-217.88,0,-326.167	0/0:241:240,0:240:8513:0:0:0,-72.2472,-690.584	0/0:85:85,0:85:3005:0:0:0,-25.5875,-241.396	0/0:158:158,0:158:5615:0:0:0,-47.5627,-396.594	0/1:208:92,116:92:3240:116:4126:-225.847,0,-192.782	0/0:27:27,0:27:963:0:0:0,-8.12781,-80.5483	0/0:190:190,0:190:6744:0:0:0,-57.1957,-548.163	0/1:160:70,90:70:2462:90:3240:-137.775,0,-136.474	0/0:503:503,0:503:17821:0:0:0,-151.418,-1363.78	0/0:271:271,0:271:9671:0:0:0,-81.5791,-785.384	0/0:272:272,0:272:9681:0:0:0,-81.8802,-699.474	0/0:188:186,2:186:6635:2:72:0,-52.6291,-488.306	0/0:29:29,0:29:1029:0:0:0,-8.72987,-80.7069	0/0:219:219,0:219:7787:0:0:0,-65.9256,-607.5	0/1:247:112,135:112:3907:135:4836:-197.186,0,-224.424	0/0:319:318,1:318:11371:1:36:0,-93.5617,-883.092	0/0:157:157,0:157:5570:0:0:0,-47.2617,-435.854	0/0:175:175,0:175:6217:0:0:0,-52.6802,-512.168	0/0:141:141,0:141:4995:0:0:0,-42.4452,-388.713	0/0:271:270,1:270:9562:1:36:0,-78.8429,-770.046	0/1:74:38,36:38:1351:36:1284:-50.628,0,-76.6039	0/0:158:158,0:158:5606:0:0:0,-47.5627,-436.058	0/0:160:160,0:160:5672:0:0:0,-48.1648,-436.457	0/0:135:135,0:135:4801:0:0:0,-40.639,-375.487	0/1:225:103,122:103:3639:122:4355:-200.713,0,-217.681	0/1:156:64,92:64:2274:92:3270:-167.705,0,-140.674	0/0:175:175,0:175:6156:0:0:0,-52.6802,-504.988	0/0:247:247,0:247:8800:0:0:0,-74.3544,-730.225
chr02	16298251	.	A	G	285749	PASS	AB=0.470588;ABP=31.6226;AC=158;AF=0.840426;AN=188;AO=10525;CIGAR=1X;DP=12572;DPB=12572;DPRA=0;EPP=22857.8;EPPR=4428.47;GTI=0;LEN=1;MEANALT=1.09574;MQM=53.5338;MQMR=59.8449;NS=94;NUMALT=1;ODDS=4.11254;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=368814;QR=72007;RO=2038;RPL=5286;RPP=3.46605;RPPR=49.1077;RPR=5239;RUN=1;SAF=5286;SAP=3.46605;SAR=5239;SRF=915;SRP=49.1077;SRR=1123;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:85:0,85:0:0:85:3015:-270.303,-25.5876,0	1/1:140:0,140:0:0:140:4950:-444.934,-42.1442,0	1/1:209:0,209:0:0:209:7367:-660.339,-62.9153,0	1/1:241:1,240:1:32:240:8437:-752.198,-69.3568,0	0/1:95:49,46:49:1733:46:1639:-118.177,0,-127.64	0/1:70:35,35:35:1238:35:1247:-91.1984,0,-90.6508	0/1:166:85,81:85:3008:81:2826:-203.287,0,-220.952	1/1:186:2,184:2:72:184:6424:-569.48,-49.1549,0	1/1:170:0,170:0:0:170:5938:-531.383,-51.1751,0	1/1:173:0,173:0:0:173:6080:-544.789,-52.0782,0	1/1:103:0,103:0:0:103:3552:-316.883,-31.0061,0	1/1:163:1,162:1:36:162:5665:-502.746,-45.4696,0	1/1:185:0,185:0:0:185:6403:-572.893,-55.6906,0	0/1:113:57,56:57:2016:56:1951:-140.364,0,-147.697	0/1:122:76,46:76:2706:46:1597:-106.245,0,-207.058	0/1:100:57,43:57:2011:43:1510:-105.282,0,-151.16	1/1:90:0,90:0:0:90:3147:-282.952,-27.0927,0	0/1:72:44,28:44:1562:28:970:-65.8038,0,-119.196	1/1:74:0,74:0:0:74:2598:-232.881,-22.2762,0	0/1:217:118,99:118:4158:99:3473:-245.755,0,-309.079	0/1:204:98,106:98:3468:106:3737:-272.819,0,-250.63	1/1:122:0,122:0:0:122:4291:-382.928,-36.7257,0	1/1:140:1,139:1:36:139:4900:-433.805,-38.5459,0	1/1:94:8,86:8:272:86:3058:-249.451,-3.48563,0	1/1:103:1,102:1:36:102:3603:-319.461,-27.4078,0	1/1:368:0,368:0:0:368:12966:-1161.9,-110.779,0	1/1:307:0,307:0:0:307:10835:-969.856,-92.4162,0	1/1:70:1,69:1:32:69:2421:-214.204,-17.8728,0	0/1:294:132,162:132:4664:162:5678:-419.597,0,-331.15	0/1:180:106,73:106:3789:73:2574:-176.75,0,-286.958	0/1:189:86,103:86:3051:103:3638:-269.986,0,-217.926	1/1:13:0,13:0:0:13:444:-40.1939,-3.91339,0	1/1:9:0,9:0:0:9:316:-28.6283,-2.70927,0	1/1:6:0,6:0:0:6:216:-19.7726,-1.80618,0	0/1:19:8,11:8:288:11:396:-29.7835,0,-20.5478	1/1:13:0,13:0:0:13:456:-41.2056,-3.91339,0	1/1:346:1,345:1:36:345:12021:-1067.22,-100.558,0	1/1:165:0,164:0:0:164:5675:-508.814,-49.3689,0	1/1:81:0,81:0:0:81:2798:-250.623,-24.3834,0	0/1:5:4,1:4:144:1:36:-2.06828,0,-11.8085	1/1:187:0,187:0:0:187:6563:-587.274,-56.2926,0	1/1:54:0,54:0:0:54:1877:-168.343,-16.2556,0	0/1:219:117,102:117:4148:102:3530:-250.228,0,-307.57	0/1:132:80,52:80:2822:52:1787:-120.501,0,-214.484	0/1:110:55,55:55:1943:55:1886:-136.048,0,-141.987	1/1:125:0,125:0:0:125:4450:-397.026,-37.6288,0	0/1:133:84,49:84:2979:49:1739:-115.891,0,-228.303	1/1:245:0,245:0:0:245:8594:-768.159,-73.7524,0	1/1:126:0,125:0:0:125:4403:-394.234,-37.6288,0	1/1:200:0,200:0:0:200:7059:-632.893,-60.206,0	1/1:149:0,149:0:0:149:5195:-465.109,-44.8535,0	0/1:16:5,11:5:180:11:392:-30.638,0,-11.7356	1/1:213:0,212:0:0:212:7420:-664.6,-63.8184,0	1/1:45:0,45:0:0:45:1556:-139.429,-13.5464,0	1/1:12:1,11:1:36:11:392:-31.9577,-0.0140851,0	0/1:213:109,103:109:3862:103:3606:-258.82,0,-283.642	1/1:75:0,74:0:0:74:2584:-230.345,-22.2762,0	0/1:4:2,2:2:72:2:72:-5.60271,0,-5.6326	0/1:25:6,19:6:212:19:671:-52.8045,0,-11.899	1/1:119:0,119:0:0:119:4182:-375,-35.8226,0	1/1:122:1,121:1:36:121:4235:-375.595,-33.1274,0	1/1:10:0,10:0:0:10:344:-31.2634,-3.0103,0	1/1:200:0,200:0:0:200:6971:-625.425,-60.206,0	0/1:179:85,93:85:3001:93:3289:-240.463,0,-216.383	1/1:97:1,96:1:36:96:3384:-300.159,-25.6016,0	1/1:89:0,89:0:0:89:3125:-280.911,-26.7917,0	0/1:220:113,107:113:3962:107:3757:-270.956,0,-290.048	1/1:147:0,147:0:0:147:5177:-462.852,-44.2514,0	1/1:65:0,65:0:0:65:2315:-206.597,-19.567,0	1/1:94:0,94:0:0:94:3315:-297.372,-28.2968,0	0/1:97:37,60:37:1293:60:2072:-156.68,0,-87.4688	1/1:30:0,30:0:0:30:1058:-94.6277,-9.0309,0	1/1:133:0,133:0:0:133:4676:-418.378,-40.037,0	0/1:157:86,71:86:3031:71:2513:-177.821,0,-225.735	1/1:220:0,220:0:0:220:7730:-693.612,-66.2266,0	1/1:228:0,227:0:0:227:8047:-719.404,-68.3338,0	1/1:108:1,107:1:36:107:3729:-330.236,-28.913,0	1/1:142:1,141:1:36:141:4952:-440.741,-39.148,0	1/1:19:0,19:0:0:19:662:-59.4925,-5.71957,0	1/1:162:1,161:1:36:161:5628:-501.215,-45.1686,0	0/1:104:56,48:56:1981:48:1663:-117.073,0,-147.256	1/1:349:0,349:0:0:349:12297:-1099.74,-105.059,0	1/1:148:1,147:1:36:147:5051:-448.546,-40.9542,0	1/1:108:0,108:0:0:108:3750:-334.492,-32.5112,0	1/1:135:0,135:0:0:135:4620:-414.724,-40.6391,0	1/1:262:0,262:0:0:262:9110:-814.741,-78.8699,0	0/1:47:27,20:27:951:20:677:-46.9737,0,-71.7559	1/1:140:0,140:0:0:140:4859:-434.614,-42.1442,0	1/1:128:0,128:0:0:128:4449:-398.983,-38.5318,0	1/1:66:0,66:0:0:66:2324:-208.377,-19.868,0	0/1:155:96,59:96:3363:59:2059:-137.867,0,-255.606	0/1:151:99,51:99:3459:51:1769:-111.977,0,-265.972	1/1:159:0,159:0:0:159:5591:-499.41,-47.8638,0	1/1:197:3,194:3:108:194:6810:-597.209,-49.2277,0
chr02	16946331	.	GGATAATAC	AGATAGTAA,AGATAATAA	424591	PASS	AB=0.522644,0.471289;ABP=23.5633,36.0529;AC=157,31;AF=0.835106,0.164894;AN=188;AO=13205,2197;CIGAR=1X4M1X2M1X,1X7M1X;DP=15526;DPB=15527;DPRA=41.7258,0.879058;EPP=28677.3,4765.05;EPPR=7.35324;GTI=2;LEN=9,9;MEANALT=2.50538,2.89474;MQM=59.9471,59.9886;MQMR=60;NS=94;NUMALT=2;ODDS=1.86563;PAIRED=0,0;PAIREDR=0;PAO=2.66667,2.66667;PQA=93.3333,93.3333;PQR=36;PRO=2;QA=463168,77858;QR=71;RO=2;RPL=5900,946;RPP=327.625,94.9544;RPPR=7.35324;RPR=7305,1251;RUN=1,1;SAF=5900,947;SAP=327.625,93.7525;SAR=7305,1250;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:53:0,52,0:0:0:52,0:1836,0:-165.16,-15.6536,0,-165.16,-15.6536,-165.16	1/1:205:0,204,0:0:0:204,0:7152,0:-643.44,-61.4101,0,-643.44,-61.4101,-643.44	1/1:211:0,211,0:0:0:211,0:7393,0:-665.428,-63.5173,0,-665.428,-63.5173,-665.428	1/1:193:0,193,0:0:0:193,0:6785,0:-610.506,-58.0988,0,-610.506,-58.0988,-610.506	1/2:122:0,57,65:0:0:57,65:2015,2287:-350.634,-186.523,-169.364,-164.464,0,-144.897	1/2:115:0,75,40:0:0:75,40:2608,1424:-328.449,-116.415,-93.8381,-212.387,0,-200.345	1/2:176:0,93,80:0:0:93,80:3287,2833:-498.484,-230.799,-202.803,-267.711,0,-243.629	1/1:214:0,213,1:0:0:213,1:7469,36:-671.907,-64.1194,0,-668.969,-60.8221,-668.668	1/1:228:0,228,0:0:0:228,0:8013,0:-721.161,-68.6348,0,-721.161,-68.6348,-721.161	1/1:197:0,195,0:0:0:195,0:6758,0:-607.99,-58.7009,0,-607.99,-58.7009,-607.99	1/1:161:0,161,0:0:0:161,0:5671,0:-510.507,-48.4658,0,-510.507,-48.4658,-510.507	1/1:188:0,185,0:0:0:185,0:6468,0:-581.899,-55.6906,0,-581.899,-55.6906,-581.899	1/1:212:0,212,0:0:0:212,0:7443,0:-669.932,-63.8184,0,-669.932,-63.8184,-669.932	1/2:188:0,99,86:0:0:99,86:3493,3067:-534.451,-250.024,-220.222,-284.436,0,-258.547	1/2:168:0,80,87:0:0:80,87:2799,3100:-480.392,-252.676,-228.594,-227.709,0,-201.519	1/2:172:0,93,75:0:0:93,75:3257,2661:-481.819,-216.812,-188.817,-265.014,0,-242.437	1/1:186:0,185,0:0:0:185,0:6500,0:-584.806,-55.6906,0,-584.806,-55.6906,-584.806	1/2:135:0,78,57:0:0:78,57:2740,2014:-387.386,-164.373,-140.893,-223.365,0,-206.206	1/1:84:0,83,0:0:0:83,0:2895,0:-260.411,-24.9855,0,-260.411,-24.9855,-260.411	1/2:251:0,125,125:0:0:125,125:4411,4415:-718.72,-359.535,-321.906,-359.178,0,-321.55	1/2:260:0,134,126:0:0:134,126:4673,4481:-745.581,-365.531,-325.193,-380.402,0,-342.472	1/1:104:0,103,0:0:0:103,0:3595,0:-323.456,-31.0061,0,-323.456,-31.0061,-323.456	1/1:134:0,133,0:0:0:133,0:4658,0:-419.029,-40.037,0,-419.029,-40.037,-419.029	1/1:123:0,115,6:0:0:115,6:4058,216:-365.061,-34.6185,0,-347.436,-16.965,-345.63	1/1:150:0,150,0:0:0:150,0:5240,0:-471.695,-45.1545,0,-471.695,-45.1545,-471.695	1/1:429:0,427,0:0:0:427,0:15063,0:-1355,-128.54,0,-1355,-128.54,-1355	1/1:396:0,392,0:0:0:392,0:13754,0:-1236.9,-118.004,0,-1236.9,-118.004,-1236.9	1/1:93:0,93,0:0:0:93,0:3293,0:-296.591,-27.9958,0,-296.591,-27.9958,-296.591	1/2:397:0,212,183:0:0:212,183:7435,6519:-1136.39,-531.349,-467.531,-605.03,0,-549.942	1/1:213:0,213,0:0:0:213,0:7441,0:-669.753,-64.1194,0,-669.753,-64.1194,-669.753	1/2:174:0,96,77:0:0:96,77:3337,2744:-494.967,-223.674,-194.775,-271.296,0,-248.116	1/1:18:0,18,0:0:0:18,0:626,0:-56.6638,-5.41854,0,-56.6638,-5.41854,-56.6638	1/1:35:0,31,0:0:0:31,0:1081,0:-97.2452,-9.33193,0,-97.2452,-9.33193,-97.2452	1/1:8:0,8,0:0:0:8,0:270,0:-24.628,-2.40824,0,-24.628,-2.40824,-24.628	1/2:14:0,7,7:0:0:7,7:231,248:-39.2194,-20.557,-18.4498,-19.0045,0,-16.8972	1/1:20:0,20,0:0:0:20,0:712,0:-64.4068,-6.0206,0,-64.4068,-6.0206,-64.4068	1/1:397:0,395,0:0:0:395,0:13968,0:-1256.6,-118.907,0,-1256.6,-118.907,-1256.6	1/1:146:0,144,0:0:0:144,0:5030,0:-452.567,-43.3483,0,-452.567,-43.3483,-452.567	1/1:130:0,126,0:0:0:126,0:4434,0:-398.93,-37.9298,0,-398.93,-37.9298,-398.93	2/2:4:0,0,4:0:0:0,4:0,135:-12.4825,-12.4825,-12.4825,-1.20412,-1.20412,0	1/1:181:0,179,0:0:0:179,0:6224,0:-559.86,-53.8844,0,-559.86,-53.8844,-559.86	1/1:84:0,80,0:0:0:80,0:2817,0:-253.408,-24.0824,0,-253.408,-24.0824,-253.408	1/2:231:0,124,106:0:0:124,106:4351,3765:-660.979,-306.89,-269.562,-354.19,0,-322.281	1/2:153:0,63,88:0:0:63,88:2196,3117:-432.618,-254.027,-235.062,-178.701,0,-152.21	1/2:167:0,91,75:0:0:91,75:3183,2660:-475.69,-216.741,-189.347,-258.981,0,-236.404	1/1:152:0,150,0:0:0:150,0:5263,0:-473.504,-45.1545,0,-473.504,-45.1545,-473.504	1/2:189:0,118,70:0:0:118,70:4148,2493:-540.803,-203.187,-167.666,-337.608,0,-316.536	1/1:222:0,219,0:0:0:219,0:7587,0:-682.559,-65.9256,0,-682.559,-65.9256,-682.559	1/1:171:0,171,0:0:0:171,0:6006,0:-540.649,-51.4761,0,-540.649,-51.4761,-540.649	1/1:230:0,228,0:0:0:228,0:8019,0:-721.433,-68.6348,0,-721.433,-68.6348,-721.433	1/1:208:0,203,2:0:0:203,2:7202,72:-647.889,-61.1091,0,-642.014,-55.2289,-641.412	1/2:11:0,8,3:0:0:8,3:288,108:-32.6714,-9.17208,-6.76384,-23.8592,0,-22.9561	1/1:172:0,170,0:0:0:170,0:6019,0:-541.462,-51.1751,0,-541.462,-51.1751,-541.462	1/1:96:0,94,1:0:0:94,1:3265,36:-293.718,-28.2968,0,-290.781,-25.3544,-290.48	1/2:10:0,3,6:0:0:3,6:108,216:-26.437,-17.6246,-16.7215,-8.81372,0,-7.00754	1/2:200:0,97,102:0:0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chr02	17641272	.	C	T	430845	PASS	AB=0.506946;ABP=5.6949;AC=158;AF=0.840426;AN=188;AO=18400;CIGAR=1X;DP=21599;DPB=21599;DPRA=0;EPP=39958.1;EPPR=6938.69;GTI=0;LEN=1;MEANALT=1.05319;MQM=43.8399;MQMR=45.252;NS=94;NUMALT=1;ODDS=5.56589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=654922;QR=112891;RO=3194;RPL=8646;RPP=147.893;RPPR=135.83;RPR=9754;RUN=1;SAF=8646;SAP=147.893;SAR=9754;SRF=1376;SRP=135.83;SRR=1818;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:116:0,116:0:0:116:4123:-308.593,-34.9195,0	1/1:363:1,362:1:36:362:12893:-1036.67,-106.995,0	1/1:412:0,412:0:0:412:14727:-1004.38,-124.024,0	1/1:487:3,484:3:108:484:17280:-1272,-137.413,0	0/1:198:86,112:86:3084:112:3981:-247.546,0,-180.754	0/1:71:26,45:26:915:45:1595:-109.705,0,-53.814	0/1:253:137,116:137:4861:116:4143:-260.042,0,-318.418	1/1:415:0,415:0:0:415:14696:-1098.85,-124.927,0	1/1:287:1,286:1:36:286:10178:-748.386,-84.1167,0	1/1:159:0,159:0:0:159:5656:-448.461,-47.8638,0	1/1:145:0,145:0:0:145:5175:-404.596,-43.6494,0	1/1:218:1,217:1:36:217:7701:-532.308,-62.0263,0	1/1:173:0,173:0:0:173:6171:-457.7,-52.0782,0	0/1:146:67,79:67:2370:79:2799:-181.098,0,-138.51	0/1:172:77,95:77:2746:95:3393:-213.989,0,-162.373	0/1:152:67,85:67:2345:85:3023:-175.832,0,-130.484	1/1:143:0,143:0:0:143:5083:-396.833,-43.0473,0	0/1:130:55,75:55:1927:75:2663:-177.696,0,-117.589	1/1:101:1,100:1:36:100:3531:-257.672,-26.8058,0	0/1:599:307,292:307:10951:292:10434:-654.892,0,-731.514	0/1:357:183,174:183:6480:174:6208:-384.057,0,-394.749	1/1:156:0,156:0:0:156:5542:-452.668,-46.9607,0	1/1:262:0,262:0:0:262:9330:-709.403,-78.8699,0	1/1:310:11,299:11:379:299:10629:-863.529,-62.3632,0	1/1:248:0,248:0:0:248:8836:-668.062,-74.6554,0	1/1:641:2,638:2:72:638:22730:-1830.29,-186.182,0	1/1:450:0,450:0:0:450:16099:-1206.41,-135.464,0	1/1:84:0,84:0:0:84:2981:-238.612,-25.2865,0	0/1:708:373,335:373:13181:335:11949:-748.873,0,-870.64	1/1:217:0,216:0:0:216:7663:-595.439,-65.0225,0	0/1:248:103,145:103:3654:145:5143:-321.142,0,-224.944	1/1:23:0,23:0:0:23:824:-58.1129,-6.92369,0	1/1:21:1,20:1:36:20:699:-44.6502,-3.85472,0	1/1:12:0,12:0:0:12:428:-34.065,-3.61236,0	0/1:17:11,6:11:396:6:216:-8.62571,0,-26.0674	1/1:39:0,39:0:0:39:1404:-84.8059,-11.7402,0	1/1:470:1,469:1:36:469:16686:-1350,-137.886,0	1/1:213:0,213:0:0:213:7559:-602.144,-64.1194,0	1/1:143:0,142:0:0:142:5032:-371.318,-42.7463,0	0/1:15:9,6:9:324:6:212:-10.5886,0,-21.898	1/1:298:0,298:0:0:298:10614:-810.838,-89.7069,0	1/1:92:0,92:0:0:92:3265:-246.642,-27.6948,0	0/1:406:206,200:206:7265:200:7112:-424.494,0,-452.832	0/1:184:87,97:87:3002:97:3451:-224.411,0,-186.591	0/1:191:93,98:93:3224:98:3484:-215.516,0,-208.934	1/1:226:0,226:0:0:226:8079:-643.57,-68.0328,0	0/1:250:99,151:99:3432:151:5361:-332.647,0,-181.893	1/1:467:2,464:2:72:464:16484:-1285.01,-134.789,0	1/1:220:0,220:0:0:220:7765:-631.424,-66.2266,0	1/1:361:0,361:0:0:361:12864:-1037.19,-108.672,0	1/1:399:1,397:1:32:397:14157:-1171.49,-117.402,0	0/1:42:18,24:18:636:24:864:-57.7113,0,-35.0403	1/1:390:0,390:0:0:390:13897:-1002.97,-117.402,0	1/1:82:0,82:0:0:82:2932:-224.667,-24.6845,0	0/1:17:5,12:5:180:12:424:-30.982,0,-9.00684	0/1:353:185,168:185:6499:168:5993:-336.707,0,-368.74	1/1:81:0,81:0:0:81:2900:-217.557,-24.3834,0	0/1:31:14,17:14:492:17:608:-41.4958,0,-30.8925	0/1:23:10,13:10:343:13:464:-30.9411,0,-20.1151	1/1:182:0,182:0:0:182:6479:-497.397,-54.7875,0	1/1:214:0,214:0:0:214:7594:-592.299,-64.4204,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:299:0,299:0:0:299:10622:-871.697,-90.008,0	0/1:369:194,175:194:6881:175:6210:-391.166,0,-457.232	1/1:176:3,173:3:108:173:6146:-476.087,-43.9621,0	1/1:256:0,256:0:0:256:9142:-706.255,-77.0637,0	0/1:335:163,172:163:5759:172:6139:-391.866,0,-358.356	1/1:300:2,298:2:72:298:10641:-779.484,-83.4723,0	1/1:85:0,85:0:0:85:3012:-212.637,-25.5876,0	1/1:135:0,135:0:0:135:4780:-402.663,-40.6391,0	0/1:179:82,97:82:2900:97:3451:-227.389,0,-188.713	1/1:36:0,36:0:0:36:1284:-102.488,-10.8371,0	1/1:139:0,139:0:0:139:4901:-361.575,-41.8432,0	0/1:194:87,107:87:3097:107:3794:-204.381,0,-172.452	1/1:480:0,480:0:0:480:17056:-1277.47,-144.494,0	1/1:418:0,418:0:0:418:14897:-1177.59,-125.831,0	1/1:282:1,281:1:36:281:10004:-757.389,-81.2922,0	1/1:334:1,333:1:36:333:11854:-918.003,-96.9457,0	1/1:47:0,47:0:0:47:1684:-129.231,-14.1484,0	1/1:347:2,345:2:72:345:12310:-926.091,-97.6207,0	0/1:312:157,155:157:5549:155:5510:-283.787,0,-298.968	1/1:512:0,512:0:0:512:18226:-1445.69,-154.127,0	1/1:212:0,212:0:0:212:7574:-619.226,-63.8184,0	1/1:171:0,171:0:0:171:6108:-474.489,-51.4761,0	1/1:221:0,221:0:0:221:7847:-650.752,-66.5276,0	1/1:350:0,350:0:0:350:12423:-1002.18,-105.361,0	0/1:92:51,41:51:1800:41:1468:-74.9542,0,-108.373	1/1:178:0,178:0:0:178:6337:-480.753,-53.5833,0	1/1:178:0,178:0:0:178:6287:-461.35,-53.5833,0	1/1:95:0,95:0:0:95:3387:-243.46,-28.5979,0	0/1:185:87,98:87:3103:98:3440:-205.799,0,-174.945	0/1:178:120,58:120:4256:58:2075:-109.087,0,-284.431	1/1:338:1,337:1:36:337:12030:-906.091,-98.1499,0	1/1:275:0,275:0:0:275:9789:-779.438,-82.7833,0
chr02	18699551	.	T	C	230443	PASS	AB=0.710373;ABP=859.088;AC=159;AF=0.845745;AN=188;AO=9056;CIGAR=1X;DP=9715;DPB=9715;DPRA=0;EPP=19667.9;EPPR=1418.81;GTI=7;LEN=1;MEANALT=1.06383;MQM=50.6905;MQMR=59.9294;NS=94;NUMALT=1;ODDS=2.41748;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=317030;QR=23248;RO=652;RPL=6375;RPP=3275;RPPR=1367.17;RPR=2681;RUN=1;SAF=6375;SAP=3275;SAR=2681;SRF=646;SRP=1367.17;SRR=6;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:66:0,66:0:0:66:2307:-206.047,-19.868,0	1/1:149:0,149:0:0:149:5229:-419.996,-44.8535,0	1/1:271:0,269:0:0:269:9347:-820.303,-80.9771,0	1/1:216:0,216:0:0:216:7643:-665.083,-65.0225,0	0/1:63:23,40:23:824:40:1431:-102.27,0,-55.5184	0/1:33:5,28:5:180:28:976:-75.7019,0,-6.61807	0/1:76:15,61:15:540:61:2134:-164.92,0,-26.0583	1/1:199:0,199:0:0:199:6989:-591.197,-59.905,0	1/1:116:0,116:0:0:116:4058:-349.218,-34.9195,0	1/1:100:0,100:0:0:100:3508:-299.665,-30.103,0	1/1:104:0,104:0:0:104:3619:-307.48,-31.3071,0	1/1:111:0,111:0:0:111:3855:-334.023,-33.4143,0	1/1:98:0,98:0:0:98:3374:-290.119,-29.5009,0	0/1:79:22,57:22:764:57:1998:-143.136,0,-45.2954	0/1:76:29,47:29:1032:47:1639:-119.806,0,-70.3127	0/1:71:27,43:27:972:43:1521:-106.733,0,-66.4064	1/1:99:0,99:0:0:99:3421:-282.498,-29.802,0	0/1:48:10,38:10:360:38:1327:-96.919,0,-18.2949	1/1:62:0,62:0:0:62:2175:-186.23,-18.6639,0	0/1:126:34,92:34:1209:92:3209:-236.759,0,-71.1844	0/1:108:19,89:19:675:89:3054:-231.619,0,-28.5657	1/1:100:0,100:0:0:100:3515:-307.488,-30.103,0	1/1:88:0,88:0:0:88:3075:-270.482,-26.4906,0	0/1:73:14,59:14:504:59:2058:-154.343,0,-23.7229	1/1:95:0,95:0:0:95:3325:-289.883,-28.5979,0	1/1:296:4,292:4:144:292:10267:-877.778,-75.7913,0	1/1:285:0,285:0:0:285:9918:-852.683,-85.7936,0	1/1:48:0,48:0:0:48:1683:-144.823,-14.4494,0	0/1:190:55,135:55:1976:135:4718:-354.03,0,-120.919	1/1:123:0,123:0:0:123:4337:-364.378,-37.0267,0	0/1:62:21,41:21:743:41:1402:-107.686,0,-48.5295	1/1:24:0,24:0:0:24:847:-72.6987,-7.22472,0	1/1:26:0,26:0:0:26:877:-77.7086,-7.82678,0	1/1:19:0,19:0:0:19:672:-57.8873,-5.71957,0	1/1:6:0,6:0:0:6:208:-18.6818,-1.80618,0	1/1:23:0,23:0:0:23:816:-68.6564,-6.92369,0	1/1:208:0,208:0:0:208:7259:-630.162,-62.6142,0	1/1:105:0,105:0:0:105:3729:-305.873,-31.6082,0	1/1:105:0,105:0:0:105:3660:-303.581,-31.6082,0	0/1:5:1,4:1:36:4:135:-10.4744,0,-2.09312	1/1:167:0,167:0:0:167:5896:-510.849,-50.272,0	1/1:63:0,63:0:0:63:2192:-190.222,-18.9649,0	0/1:157:48,109:48:1705:109:3799:-284.221,0,-106.472	0/1:70:24,46:24:852:46:1632:-120.412,0,-55.9283	0/1:46:18,28:18:648:28:975:-71.7145,0,-44.8045	1/1:128:0,128:0:0:128:4545:-400.498,-38.5318,0	0/1:91:23,67:23:820:67:2361:-177.902,0,-46.6459	1/1:183:1,182:1:36:182:6353:-551.033,-51.4902,0	1/1:117:0,117:0:0:117:4091:-354.493,-35.2205,0	1/1:208:0,208:0:0:208:7318:-626.968,-62.6142,0	1/1:90:0,90:0:0:90:3185:-274.945,-27.0927,0	0/1:5:1,4:1:36:4:136:-10.1147,0,-2.09312	1/1:130:0,130:0:0:130:4621:-393.717,-39.1339,0	1/1:63:0,63:0:0:63:2243:-196.501,-18.9649,0	0/1:11:2,9:2:72:9:320:-22.8926,0,-3.52539	0/1:142:48,94:48:1711:94:3285:-244.107,0,-111.528	1/1:63:0,63:0:0:63:2230:-197.077,-18.9649,0	0/1:6:1,5:1:36:5:180:-13.6437,0,-1.79209	1/1:14:1,13:1:36:13:443:-34.5796,-0.616145,0	1/1:78:0,78:0:0:78:2757:-234.171,-23.4803,0	1/1:134:0,134:0:0:134:4601:-398.551,-40.338,0	1/1:7:0,7:0:0:7:252:-21.7793,-2.10721,0	1/1:159:2,157:2:72:157:5528:-475.497,-41.0319,0	0/1:130:29,101:29:1044:101:3569:-265.153,0,-55.1405	1/1:107:2,105:2:72:105:3730:-302.436,-25.3735,0	1/1:103:0,103:0:0:103:3610:-316.915,-31.0061,0	0/1:116:38,77:38:1360:77:2735:-198.455,0,-87.7215	1/1:147:1,146:1:36:146:5002:-433.794,-40.6531,0	1/1:77:0,77:0:0:77:2614:-226.368,-23.1793,0	1/1:83:0,83:0:0:83:2889:-248.112,-24.9855,0	0/1:51:13,38:13:459:38:1347:-99.766,0,-26.2916	1/1:27:0,27:0:0:27:955:-79.5251,-8.12781,0	1/1:125:0,125:0:0:125:4420:-368.618,-37.6288,0	0/1:72:19,53:19:680:53:1811:-137.627,0,-39.855	1/1:138:0,138:0:0:138:4843:-414.729,-41.5421,0	1/1:211:0,210:0:0:210:7359:-640.136,-63.2163,0	1/1:195:0,195:0:0:195:6804:-579.432,-58.7009,0	1/1:165:0,165:0:0:165:5786:-493.502,-49.67,0	1/1:31:0,31:0:0:31:1068:-93.8614,-9.33193,0	1/1:195:0,195:0:0:195:6813:-592.506,-58.7009,0	0/1:115:31,83:31:1107:83:2928:-216.122,0,-65.263	1/1:213:0,213:0:0:213:7512:-648.915,-64.1194,0	1/1:94:0,94:0:0:94:3291:-282.74,-28.2968,0	1/1:82:0,82:0:0:82:2879:-247.485,-24.6845,0	1/1:68:0,68:0:0:68:2372:-199.981,-20.47,0	1/1:155:0,155:0:0:155:5432:-466.053,-46.6597,0	0/1:20:7,13:7:243:13:446:-31.2893,0,-16.1869	1/1:75:0,75:0:0:75:2582:-222.65,-22.5773,0	1/1:101:0,101:0:0:101:3486:-294.703,-30.404,0	1/1:65:0,65:0:0:65:2261:-193.771,-19.567,0	0/1:122:33,89:33:1152:89:3064:-220.298,0,-67.2568	0/1:63:31,32:31:1112:32:1135:-79.7769,0,-81.4265	1/1:148:0,148:0:0:148:5225:-454.261,-44.5524,0	1/1:137:0,137:0:0:137:4804:-420.517,-41.2411,0
chr02	18967725	.	A	G	31910	PASS	AB=0.553347;ABP=87.5746;AC=31;AF=0.164894;AN=188;AO=1912;CIGAR=1X;DP=10805;DPB=10805;DPRA=1.39318;EPP=3715.48;EPPR=18907.8;GTI=0;LEN=1;MEANALT=1;MQM=40.2071;MQMR=59.4958;NS=94;NUMALT=1;ODDS=6.4046;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67957;QR=317418;RO=8893;RPL=52;RPP=3715.48;RPPR=18907.8;RPR=1860;RUN=1;SAF=0;SAP=4154.87;SAR=1912;SRF=0;SRP=19313.9;SRR=8893;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:112:112,0:112:3985:0:0:0,-33.7154,-358.148	0/0:179:179,0:179:6387:0:0:0,-53.8844,-574.879	0/0:181:181,0:181:6486:0:0:0,-54.4864,-583.603	0/0:247:247,0:247:8817:0:0:0,-74.3544,-793.429	0/1:106:35,71:35:1256:71:2540:-185.276,0,-81.4137	0/1:52:12,40:12:432:40:1418:-106.278,0,-23.5676	0/1:120:57,63:57:2035:63:2264:-158.672,0,-147.276	0/0:222:222,0:222:7933:0:0:0,-66.8287,-713.644	0/0:129:129,0:129:4596:0:0:0,-38.8329,-413.108	0/0:141:141,0:141:5023:0:0:0,-42.4452,-451.839	0/0:66:66,0:66:2364:0:0:0,-19.868,-212.971	0/0:45:45,0:45:1597:0:0:0,-13.5463,-143.912	0/0:50:50,0:50:1767:0:0:0,-15.0515,-159.259	0/1:57:34,23:34:1201:23:803:-52.2793,0,-91.2345	0/1:65:35,30:35:1260:30:1072:-74.3014,0,-94.1385	0/1:37:17,20:17:612:20:712:-50.3845,0,-44.2753	0/0:69:69,0:69:2461:0:0:0,-20.7711,-221.207	0/1:33:23,10:23:828:10:356:-20.9454,0,-64.9055	0/0:30:30,0:30:1062:0:0:0,-9.0309,-95.7504	0/1:214:105,109:105:3759:109:3902:-272.56,0,-274.086	0/1:194:71,123:71:2544:123:4350:-311.532,0,-170.786	0/0:191:191,0:191:6808:0:0:0,-57.4967,-612.698	0/0:110:110,0:110:3929:0:0:0,-33.1133,-353.603	0/1:201:124,77:124:4416:77:2713:-171.657,0,-337	0/0:96:96,0:96:3426:0:0:0,-28.8989,-308.503	0/0:395:394,1:394:14082:1:36:0,-115.371,-1263.38	0/0:336:336,0:336:11979:0:0:0,-101.146,-1077.58	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1486	0/1:317:134,183:134:4761:183:6536:-481.604,0,-333.197	0/0:102:102,0:102:3643:0:0:0,-30.7051,-328.02	0/1:242:119,123:119:4239:123:4381:-307.833,0,-308.781	0/0:19:19,0:19:665:0:0:0,-5.71957,-60.1728	0/0:15:15,0:15:536:0:0:0,-4.51545,-47.6416	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:5:1,4:1:36:4:144:-11.1622,0,-2.09312	0/0:17:17,0:17:599:0:0:0,-5.11751,-54.2181	0/0:178:178,0:178:6363:0:0:0,-53.5833,-571.977	0/0:210:209,1:209:7465:1:36:0,-59.7136,-668.061	0/0:59:59,0:59:2074:0:0:0,-17.7608,-186.909	0/1:7:4,3:4:144:3:99:-6.80331,0,-11.2017	0/0:191:190,1:190:6804:1:33:0,-54.5505,-609.032	0/0:20:20,0:20:703:0:0:0,-6.0206,-63.5935	0/1:175:53,122:53:1900:122:4342:-318.262,0,-117.336	0/1:94:36,58:36:1277:58:2041:-149.178,0,-86.9273	0/1:56:28,28:28:990:28:989:-69.2855,0,-72.5546	0/0:102:102,0:102:3635:0:0:0,-30.7051,-327.311	0/1:171:87,84:87:3105:84:2995:-204.859,0,-228.109	0/0:241:239,2:239:8530:2:72:0,-65.8344,-760.949	0/0:148:148,0:148:5295:0:0:0,-44.5524,-476.682	0/0:174:174,0:174:6227:0:0:0,-52.3792,-559.974	0/0:311:310,1:310:11062:1:36:0,-90.1658,-991.84	0/1:11:7,4:7:252:4:144:-9.56724,0,-19.7176	0/0:114:113,1:113:4043:1:36:0,-30.7387,-360.368	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.746	0/1:30:15,15:15:540:15:536:-36.9838,0,-39.9056	0/1:152:50,102:50:1788:102:3599:-262.725,0,-115.424	0/0:80:80,0:80:2853:0:0:0,-24.0824,-256.208	0/1:19:8,11:8:288:11:396:-29.469,0,-20.5478	0/1:28:14,14:14:500:14:500:-36.1006,0,-36.9073	0/0:77:77,0:77:2734:0:0:0,-23.1793,-245.589	0/0:75:75,0:75:2655:0:0:0,-22.5772,-239.161	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.3645	0/0:304:303,1:303:10829:1:36:0,-87.977,-970.336	0/1:193:108,85:108:3854:85:3009:-203.127,0,-288.776	0/0:107:103,4:103:3683:4:129:0,-20.7735,-319.835	0/0:97:96,1:96:3409:1:36:0,-25.6134,-303.369	0/1:370:124,246:124:4420:246:8746:-645.23,0,-286.534	0/0:92:92,0:92:3300:0:0:0,-27.6948,-297.169	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8213	0/0:110:110,0:110:3935:0:0:0,-33.1133,-354.298	0/1:56:28,28:28:1004:28:1008:-71.4893,0,-73.812	0/0:31:31,0:31:1088:0:0:0,-9.33193,-98.2048	0/0:98:96,2:96:3435:2:68:0,-23.0693,-302.871	0/1:90:52,38:52:1860:38:1343:-88.027,0,-140.494	0/0:265:265,0:265:9486:0:0:0,-79.7729,-853.494	0/0:154:154,0:154:5493:0:0:0,-46.3586,-494.383	0/0:143:143,0:143:5123:0:0:0,-43.0473,-461.002	0/0:121:119,2:119:4216:2:72:0,-29.9198,-372.959	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8395	0/0:119:119,0:119:4263:0:0:0,-35.8226,-383.785	0/1:136:68,68:68:2427:68:2414:-162.634,0,-177.726	0/0:231:230,1:230:8248:1:36:0,-65.9514,-736.795	0/0:88:88,0:88:3134:0:0:0,-26.4906,-282.203	0/0:46:46,0:46:1637:0:0:0,-13.8474,-147.614	0/0:92:92,0:92:3271:0:0:0,-27.6948,-294.576	0/0:110:109,1:109:3868:1:36:0,-29.6326,-344.786	0/1:45:27,18:27:963:18:640:-41.2212,0,-73.438	0/0:71:71,0:71:2523:0:0:0,-21.3731,-227.167	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.203	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.574	0/1:65:30,35:30:1072:35:1252:-86.3612,0,-77.2162	0/1:80:22,58:22:783:58:2051:-153.237,0,-46.6892	0/0:81:81,0:81:2891:0:0:0,-24.3834,-260.358	0/0:90:90,0:90:3212:0:0:0,-27.0927,-289.273
chr02	18986637	.	TG	CA	442112	PASS	AB=0.510399;ABP=13.9393;AC=157;AF=0.835106;AN=188;AO=21403;CIGAR=2X;DP=27150;DPB=27150;DPRA=0;EPP=46479;EPPR=12378.2;GTI=4;LEN=2;MEANALT=1.35106;MQM=47.1894;MQMR=47.3773;NS=94;NUMALT=1;ODDS=0.51256;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=755018;QR=199810;RO=5703;RPL=0;RPP=46479;RPPR=12378.2;RPR=21403;RUN=1;SAF=0;SAP=46479;SAR=21403;SRF=0;SRP=12386.9;SRR=5703;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:66:0,65:0:0:65:2315:-205.104,-19.567,0	1/1:275:0,274:0:0:274:9634:-853.661,-82.4822,0	1/1:223:0,222:0:0:222:7856:-699.335,-66.8287,0	1/1:214:0,214:0:0:214:7542:-672.846,-64.4204,0	0/1:86:41,45:41:1457:45:1580:-115.781,0,-104.805	0/1:67:30,37:30:1073:37:1311:-97.1071,0,-75.2326	0/1:59:34,25:34:1198:25:887:-61.8569,0,-89.6574	1/1:94:0,94:0:0:94:3316:-295.226,-28.2968,0	1/1:81:0,80:0:0:80:2781:-246.53,-24.0824,0	1/1:54:0,54:0:0:54:1903:-167.738,-16.2556,0	1/1:541:1,539:1:20:539:19084:-1695.43,-160.779,0	1/1:75:0,75:0:0:75:2613:-233.07,-22.5773,0	1/1:50:0,50:0:0:50:1758:-156.35,-15.0515,0	0/1:80:43,37:43:1509:37:1312:-92.9184,0,-110.979	0/1:41:18,23:18:643:23:805:-59.8108,0,-45.1189	0/1:73:34,39:34:1205:39:1375:-100.926,0,-85.376	1/1:47:0,47:0:0:47:1626:-145.439,-14.1484,0	0/1:22:11,11:11:396:11:392:-28.7036,0,-28.5798	1/1:148:0,147:0:0:147:5201:-462.011,-44.2514,0	0/1:136:67,69:67:2351:69:2420:-174.491,0,-168.458	0/1:118:59,59:59:2073:59:2063:-148.653,0,-150.375	1/1:109:0,109:0:0:109:3824:-341.39,-32.8123,0	1/1:90:1,89:1:36:89:3144:-274.719,-23.5193,0	0/1:42:18,24:18:635:24:842:-62.7075,0,-44.3146	1/1:61:0,61:0:0:61:2148:-192.091,-18.3628,0	1/1:200:0,200:0:0:200:7076:-628.733,-60.206,0	1/1:148:0,148:0:0:148:5202:-463.964,-44.5524,0	1/1:16:0,16:0:0:16:567:-50.9947,-4.81648,0	0/1:210:130,80:130:4522:80:2831:-189.27,0,-340.789	1/1:411:0,411:0:0:411:14565:-1298.39,-123.723,0	0/1:186:113,73:113:3926:73:2570:-174.042,0,-294.645	1/1:823:1,820:1:36:820:29002:-2582.19,-243.907,0	1/1:984:1,983:1:36:983:34715:-3089.79,-292.635,0	1/1:837:1,835:1:25:835:29419:-2610.43,-249.419,0	0/1:2655:892,1759:892:31003:1759:61980:-4700.04,0,-1954.92	1/1:2868:4,2859:4:144:2859:100709:-8933.73,-848.981,0	1/1:128:0,127:0:0:127:4511:-401.763,-38.2308,0	1/1:168:0,168:0:0:168:5913:-527.878,-50.573,0	1/1:356:0,354:0:0:354:12498:-1110.92,-106.565,0	0/1:938:500,437:500:17531:437:15404:-1089.48,0,-1279.78	1/1:150:0,150:0:0:150:5242:-468.418,-45.1545,0	1/1:245:0,245:0:0:245:8598:-766.224,-73.7524,0	0/1:254:104,150:104:3666:150:5304:-397.751,0,-249.444	0/1:26:10,16:10:349:16:572:-42.9437,0,-23.7127	0/1:32:19,13:19:654:13:454:-30.9559,0,-48.8586	1/1:120:0,120:0:0:120:4253:-378.73,-36.1236,0	0/1:114:52,62:52:1855:62:2190:-160.418,0,-130.699	1/1:143:0,143:0:0:143:5050:-449.643,-43.0473,0	1/1:51:0,51:0:0:51:1803:-161.498,-15.3525,0	1/1:75:0,75:0:0:75:2642:-235.423,-22.5773,0	1/1:83:0,83:0:0:83:2927:-260.773,-24.9855,0	0/1:1476:833,642:833:29280:642:22822:-1589.86,0,-2165.31	1/1:129:1,128:1:36:128:4523:-397.036,-35.2661,0	1/1:93:0,93:0:0:93:3307:-294.661,-27.9958,0	0/1:881:445,435:445:15531:435:15302:-1094.6,0,-1112.72	0/1:110:57,53:57:1943:53:1889:-134.175,0,-140.858	1/1:39:0,39:0:0:39:1361:-121.876,-11.7402,0	0/1:1181:644,536:644:22593:536:18941:-1330.33,0,-1654.24	0/1:776:464,312:464:16323:312:10985:-744.641,0,-1222.02	1/1:77:0,77:0:0:77:2710:-240.735,-23.1793,0	1/1:104:0,103:0:0:103:3672:-326.908,-31.0061,0	1/1:1011:1,1004:1:25:1004:35347:-3140.43,-300.299,0	1/1:74:0,74:0:0:74:2621:-233.302,-22.2762,0	0/1:110:64,46:64:2251:46:1609:-110.365,0,-167.626	1/1:45:1,44:1:36:44:1541:-134.297,-9.96758,0	1/1:50:0,50:0:0:50:1763:-156.522,-15.0515,0	0/1:158:85,72:85:2942:72:2544:-178.944,0,-215.396	1/1:125:1,124:1:36:124:4409:-387.653,-34.0553,0	1/1:634:0,633:0:0:633:22403:-1997.24,-190.552,0	1/1:31:0,31:0:0:31:1100:-98.4998,-9.33193,0	0/1:43:27,16:27:960:16:568:-38.1804,0,-72.8087	1/1:575:0,574:0:0:574:20280:-1805.79,-172.791,0	1/1:79:0,79:0:0:79:2832:-251.393,-23.7814,0	0/1:64:29,35:29:1029:35:1245:-91.0717,0,-72.856	1/1:185:0,185:0:0:185:6555:-586.819,-55.6906,0	1/1:103:0,103:0:0:103:3666:-326.673,-31.0061,0	1/1:242:0,242:0:0:242:8500:-753.189,-72.8493,0	1/1:60:0,60:0:0:60:2096:-186.674,-18.0618,0	1/1:670:1,666:1:36:666:23520:-2084.45,-197.568,0	1/1:64:0,64:0:0:64:2270:-202.767,-19.2659,0	0/1:86:46,40:46:1634:40:1408:-99.239,0,-120.196	1/1:140:0,138:0:0:138:4888:-435.221,-41.5421,0	1/1:49:0,49:0:0:49:1747:-156.483,-14.7505,0	1/1:55:0,55:0:0:55:1961:-175.198,-16.5567,0	1/1:32:0,32:0:0:32:1111:-98.8468,-9.63296,0	1/1:87:0,87:0:0:87:3049:-272.157,-26.1896,0	0/1:27:15,12:15:534:12:416:-29.0043,0,-39.8694	1/1:60:0,60:0:0:60:2062:-183.438,-18.0618,0	1/1:66:0,66:0:0:66:2317:-206.014,-19.868,0	1/1:625:3,620:3:106:620:21834:-1936.67,-178.021,0	0/1:1523:751,770:751:26452:770:27038:-1953.88,0,-1898.73	0/1:62:51,11:51:1720:11:383:-15.9248,0,-135.158	1/1:11:0,11:0:0:11:396:-35.7209,-3.31133,0	1/1:65:0,65:0:0:65:2298:-204.91,-19.567,0
chr02	18986651	.	TTAG	TCAA,ATAA	574256	PASS	AB=0.511449,0.485219;ABP=16.336,25.2215;AC=157,31;AF=0.835106,0.164894;AN=188;AO=21609,5694;CIGAR=1M1X1M1X,1X2M1X;DP=27393;DPB=27393.8;DPRA=0,3.55209;EPP=46848.2,12358.7;EPPR=0;GTI=3;LEN=4,4;MEANALT=2.30851,3.37209;MQM=47.3236,47.3885;MQMR=0;NS=94;NUMALT=2;ODDS=2.41867;PAIRED=0,0;PAIREDR=0;PAO=1.5,1.5;PQA=34,34;PQR=0;PRO=0;QA=761244,200888;QR=0;RO=0;RPL=9,1;RPP=46848.2,12358.7;RPPR=0;RPR=21600,5693;RUN=1,1;SAF=0,0;SAP=46926.4,12367.4;SAR=21609,5694;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:67:0,66,0:0:0:66,0:2335,0:-207.8,-19.868,0,-207.8,-19.868,-207.8	1/1:275:0,273,0:0:0:273,0:9605,0:-851.672,-82.1812,0,-851.672,-82.1812,-851.672	1/1:226:0,223,0:0:0:223,0:7851,0:-699.625,-67.1297,0,-699.625,-67.1297,-699.625	1/1:220:0,220,0:0:0:220,0:7771,0:-692.942,-66.2266,0,-692.942,-66.2266,-692.942	1/2:87:0,45,41:0:0:45,41:1576,1456:-245.484,-118.035,-104.489,-127.527,0,-115.185	1/2:68:0,37,31:0:0:37,31:1300,1108:-194.006,-89.1927,-78.0546,-105.163,0,-95.8314	1/2:60:0,26,34:0:0:26,34:904,1206:-170.897,-97.9087,-90.0819,-73.3371,0,-63.102	1/1:96:0,96,0:0:0:96,0:3339,0:-297.648,-28.8989,0,-297.648,-28.8989,-297.648	1/1:82:0,82,0:0:0:82,0:2888,0:-256.646,-24.6845,0,-256.646,-24.6845,-256.646	1/1:54:0,53,0:0:0:53,0:1841,0:-163.185,-15.9546,0,-163.185,-15.9546,-163.185	1/1:548:0,542,1:0:0:542,1:19045,25:-1695.02,-163.158,0,-1693.08,-161.215,-1692.78	1/1:75:0,74,0:0:0:74,0:2570,0:-229.482,-22.2762,0,-229.482,-22.2762,-229.482	1/1:51:0,51,0:0:0:51,0:1792,0:-159.557,-15.3525,0,-159.557,-15.3525,-159.557	1/2:81:0,38,43:0:0:38,43:1359,1519:-232.653,-123.24,-111.801,-109.766,0,-96.8215	1/2:41:0,23,18:0:0:23,18:807,647:-117.452,-52.3933,-45.4696,-65.4107,0,-59.9922	1/2:73:0,39,33:0:0:39,33:1349,1160:-202.667,-93.9871,-82.2469,-108.747,0,-98.8135	1/1:47:0,47,0:0:0:47,0:1630,0:-145.825,-14.1484,0,-145.825,-14.1484,-145.825	1/2:22:0,11,10:0:0:11,10:389,348:-59.4966,-28.0858,-24.7744,-31.4477,0,-28.4374	1/1:150:0,150,0:0:0:150,0:5280,0:-468.969,-45.1545,0,-468.969,-45.1545,-468.969	1/2:136:0,69,67:0:0:69,67:2387,2380:-383.575,-191.793,-171.021,-192.129,0,-171.96	1/2:118:0,59,59:0:0:59,59:2101,2083:-337.962,-169.038,-151.277,-169.276,0,-151.515	1/1:111:0,111,0:0:0:111,0:3910,0:-348.808,-33.4143,0,-348.808,-33.4143,-348.808	1/1:91:0,87,1:0:0:87,1:3042,36:-269.728,-26.1896,0,-266.813,-23.2602,-266.512	1/2:43:0,25,17:0:0:25,17:870,585:-116.976,-46.9817,-39.4559,-70.0152,0,-64.8977	1/1:61:0,61,0:0:0:61,0:2140,0:-191.595,-18.3628,0,-191.595,-18.3628,-191.595	1/1:205:0,205,0:0:0:205,0:7218,0:-642.387,-61.7112,0,-642.387,-61.7112,-642.387	1/1:150:0,149,0:0:0:149,0:5266,0:-469.6,-44.8535,0,-469.6,-44.8535,-469.6	1/1:16:0,16,0:0:0:16,0:566,0:-50.924,-4.81648,0,-50.924,-4.81648,-50.924	1/2:212:0,83,128:0:0:83,128:2930,4509:-599.637,-363.61,-338.624,-236.017,0,-197.485	1/1:414:0,413,0:0:0:413,0:14505,0:-1293.9,-124.325,0,-1293.9,-124.325,-1293.9	1/2:184:0,72,112:0:0:72,112:2547,3926:-523.124,-317.164,-295.489,-206.311,0,-172.595	1/1:834:0,828,1:0:0:828,1:29258,36:-2610.14,-249.253,0,-2607.22,-246.324,-2606.92	1/1:991:0,987,1:0:0:987,1:34934,30:-3113.63,-297.117,0,-3111.23,-294.726,-3110.93	1/1:848:0,844,1:0:0:844,1:29724,30:-2641.29,-254.069,0,-2638.92,-251.693,-2638.62	1/2:2674:0,1774,889:0:0:1774,889:62463,31284:-7523.7,-2511.55,-1977.52,-5012.22,0,-4744.6	1/1:2902:0,2894,4:0:0:2894,4:102090,144:-9071.37,-871.181,0,-9059.7,-859.507,-9058.5	1/1:128:0,128,0:0:0:128,0:4555,0:-405.97,-38.5318,0,-405.97,-38.5318,-405.97	1/1:172:0,171,0:0:0:171,0:6032,0:-537.52,-51.4761,0,-537.52,-51.4761,-537.52	1/1:362:0,360,0:0:0:360,0:12628,0:-1123.41,-108.371,0,-1123.41,-108.371,-1123.41	1/2:942:0,440,500:0:0:440,500:15511,17680:-2673.5,-1424.36,-1291.91,-1249.15,0,-1098.64	1/1:152:0,152,0:0:0:152,0:5320,0:-475.633,-45.7566,0,-475.633,-45.7566,-475.633	1/1:245:0,244,0:0:0:244,0:8595,0:-765.938,-73.4513,0,-765.938,-73.4513,-765.938	1/2:255:0,150,104:0:0:150,104:5275,3680:-722.143,-296.281,-251.126,-426,0,-394.692	1/2:26:0,16,10:0:0:16,10:569,356:-74.6986,-29.1634,-24.3469,-45.8873,0,-42.877	1/2:32:0,13,19:0:0:13,19:452,682:-91.314,-55.1883,-51.275,-36.4186,0,-30.699	1/1:121:0,121,0:0:0:121,0:4262,0:-379.605,-36.4246,0,-379.605,-36.4246,-379.605	1/2:114:0,62,52:0:0:62,52:2201,1816:-322.918,-146.066,-127.402,-177.2,0,-161.546	1/1:147:0,147,0:0:0:147,0:5202,0:-463.302,-44.2514,0,-463.302,-44.2514,-463.302	1/1:51:0,51,0:0:0:51,0:1807,0:-161.831,-15.3525,0,-161.831,-15.3525,-161.831	1/1:76:0,75,0:0:0:75,0:2637,0:-234.663,-22.5773,0,-234.663,-22.5773,-234.663	1/1:85:0,85,0:0:0:85,0:3009,0:-268.076,-25.5876,0,-268.076,-25.5876,-268.076	1/2:1493:0,654,836:0:0:654,836:23036,29585:-4242.44,-2385.13,-2188.26,-1857.41,0,-1605.75	1/1:129:0,127,1:0:0:127,1:4533,35:-401.522,-38.2308,0,-398.697,-35.3848,-398.396	1/1:95:0,95,0:0:0:95,0:3355,0:-299.046,-28.5979,0,-299.046,-28.5979,-299.046	1/2:882:0,435,444:0:0:435,444:15423,15607:-2491.11,-1251.35,-1120.4,-1239.82,0,-1106.17	1/2:109:0,52,57:0:0:52,57:1849,1985:-309.313,-160.43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chr02	18986662	.	G	A	92311.3	PASS	AB=0.490698;ABP=11.5742;AC=31;AF=0.164894;AN=188;AO=5619;CIGAR=1X;DP=26639;DPB=26639;DPRA=3.22881;EPP=12204.5;EPPR=44903.2;GTI=3;LEN=1;MEANALT=1.16667;MQM=47.3511;MQMR=47.3542;NS=94;NUMALT=1;ODDS=0.332115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201077;QR=745459;RO=21008;RPL=5619;RPP=12204.5;RPPR=44903.2;RPR=0;RUN=1;SAF=0;SAP=12204.5;SAR=5619;SRF=0;SRP=45621.3;SRR=21008;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:65:65,0:65:2302:0:0:0,-19.5669,-204.816	0/0:267:267,0:267:9461:0:0:0,-80.375,-836.343	0/0:220:220,0:220:7851:0:0:0,-66.2266,-698.748	0/0:214:214,0:214:7593:0:0:0,-64.4204,-676.681	0/1:85:45,40:45:1603:40:1431:-102.758,0,-117.706	0/1:68:37,31:37:1302:31:1116:-78.743,0,-96.0311	0/1:58:26,32:26:920:32:1152:-85.8125,0,-65.1044	0/0:92:92,0:92:3257:0:0:0,-27.6948,-290.405	0/0:82:82,0:82:2892:0:0:0,-24.6845,-257.261	0/0:52:52,0:52:1825:0:0:0,-15.6536,-161.078	0/0:533:532,1:532:18726:1:27:0,-157.752,-1662.87	0/0:70:70,0:70:2459:0:0:0,-21.0721,-219.322	0/0:51:51,0:51:1793:0:0:0,-15.3525,-159.365	0/1:80:37,43:37:1320:43:1517:-111.825,0,-93.6259	0/1:40:22,18:22:792:18:648:-45.8564,0,-58.9286	0/1:71:38,33:38:1345:33:1188:-85.2633,0,-98.9284	0/0:46:46,0:46:1631:0:0:0,-13.8474,-145.848	0/1:22:11,11:11:396:11:396:-28.5798,0,-29.0455	0/0:144:144,0:144:5104:0:0:0,-43.3483,-453.099	0/1:134:68,66:68:2424:66:2364:-170.274,0,-175.251	0/1:116:58,58:58:2063:58:2080:-151.533,0,-148.296	0/0:108:107,1:107:3755:1:36:0,-29.3876,-332.815	0/0:88:85,3:85:3013:3:108:0,-17.2052,-257.965	0/1:41:24,17:24:848:17:603:-41.6224,0,-63.5517	0/0:60:60,0:60:2118:0:0:0,-18.0618,-189.438	0/0:199:199,0:199:7074:0:0:0,-59.905,-629.221	0/0:146:146,0:146:5182:0:0:0,-43.9504,-462.359	0/0:16:16,0:16:567:0:0:0,-4.81648,-51.0243	0/1:207:79,127:79:2807:127:4549:-343.578,0,-188.254	0/0:399:397,0:397:14092:0:0:0,-119.509,-1256.79	0/1:186:74,112:74:2619:112:4000:-300.976,0,-178.415	0/0:805:801,3:801:28473:3:108:0,-233.06,-2529.13	0/0:953:951,2:951:33808:2:72:0,-280.454,-3006.15	0/0:819:818,1:818:28955:1:36:0,-243.041,-2567.08	0/1:2597:1711,885:1711:60696:885:31600:-2023.15,0,-4606.77	0/0:2833:2827,4:2827:100379:4:144:0,-839.811,-8905.16	0/0:127:127,0:127:4519:0:0:0,-38.2308,-402.725	0/0:166:166,0:166:5894:0:0:0,-49.971,-524.986	0/0:354:354,0:354:12541:0:0:0,-106.565,-1113.95	0/1:920:427,493:427:15138:493:17645:-1294.55,0,-1071.82	0/0:151:151,0:151:5382:0:0:0,-45.4555,-480.899	0/0:230:229,1:229:8155:1:36:0,-66.0493,-724.432	0/1:248:146,102:146:5176:102:3652:-250.798,0,-388.351	0/1:26:15,11:15:536:11:388:-26.8583,0,-40.0738	0/1:33:14,19:14:491:19:680:-50.4828,0,-34.3301	0/0:120:120,0:120:4287:0:0:0,-36.1236,-381.712	0/1:111:60,51:60:2127:51:1820:-128.825,0,-156.238	0/0:140:140,0:140:4953:0:0:0,-42.1442,-441.096	0/0:50:50,0:50:1766:0:0:0,-15.0515,-158.185	0/0:73:73,0:73:2586:0:0:0,-21.9752,-230.442	0/0:83:83,0:83:2951:0:0:0,-24.9855,-262.908	0/1:1451:630,821:630:22413:821:29447:-2185.8,0,-1560.83	0/0:127:126,1:126:4506:1:36:0,-34.664,-395.422	0/0:92:91,1:91:3235:1:36:0,-24.5711,-285.537	0/1:856:419,437:419:14865:437:15647:-1130.71,0,-1063.05	0/1:107:51,56:51:1815:56:2008:-146.927,0,-128.461	0/0:40:40,0:40:1419:0:0:0,-12.0412,-127.07	0/1:1159:528,630:528:18765:630:22558:-1657.93,0,-1321.31	0/1:766:313,453:313:11092:453:16237:-1216.17,0,-756.661	0/0:74:73,1:73:2620:1:36:0,-19.0886,-229.335	0/0:103:103,0:103:3663:0:0:0,-31.0061,-326.6	0/0:981:979,1:979:34781:1:32:0,-292.139,-3088.37	0/0:74:72,2:72:2566:2:72:0,-16.3413,-222.897	0/1:108:43,65:43:1536:65:2320:-174.336,0,-104.59	0/0:42:41,1:41:1445:1:36:0,-9.06449,-125.699	0/0:50:50,0:50:1784:0:0:0,-15.0515,-158.741	0/1:154:71,83:71:2531:83:2964:-218.737,0,-178.996	0/0:122:119,2:119:4246:2:72:0,-30.3268,-371.317	0/0:629:629,0:629:22353:0:0:0,-189.348,-1991.28	0/0:30:30,0:30:1068:0:0:0,-9.0309,-95.6159	0/1:44:17,27:17:600:27:957:-72.2077,0,-40.7639	0/0:571:570,0:570:20154:0:0:0,-171.587,-1794.07	0/0:79:79,0:79:2812:0:0:0,-23.7814,-249.875	0/1:61:32,28:32:1135:28:1008:-71.8383,0,-82.177	0/0:182:182,0:182:6464:0:0:0,-54.7875,-578.588	0/0:102:102,0:102:3603:0:0:0,-30.7051,-321.52	0/0:240:240,0:240:8533:0:0:0,-72.2472,-756.668	0/0:61:61,0:61:2168:0:0:0,-18.3628,-193.024	0/0:655:654,1:654:23213:1:36:0,-193.608,-2056.28	0/0:62:62,0:62:2203:0:0:0,-18.6639,-196.814	0/1:84:38,46:38:1328:46:1648:-122.017,0,-92.6182	0/0:142:142,0:142:5031:0:0:0,-42.7463,-448.782	0/0:48:48,0:48:1692:0:0:0,-14.4494,-151.57	0/0:54:54,0:54:1936:0:0:0,-16.2556,-172.642	0/0:33:33,0:33:1171:0:0:0,-9.93399,-104.165	0/0:85:85,0:85:2987:0:0:0,-25.5875,-266.561	0/1:26:11,15:11:392:15:540:-40.6819,0,-27.0299	0/0:58:58,0:58:2059:0:0:0,-17.4597,-183.128	0/0:65:65,0:65:2317:0:0:0,-19.5669,-205.904	0/0:610:609,1:609:21601:1:36:0,-180.05,-1920.72	0/1:1480:746,734:746:26436:734:26246:-1892.14,0,-1910.69	0/1:57:9,48:9:306:48:1709:-135.602,0,-10.5505	0/0:11:11,0:11:381:0:0:0,-3.31133,-34.3806	0/0:65:65,0:65:2287:0:0:0,-19.5669,-204.339
chr02	18986669	.	A	G	87650.9	PASS	AB=0.480457;ABP=40.7798;AC=31;AF=0.164894;AN=188;AO=5483;CIGAR=1X;DP=26859;DPB=26859;DPRA=3.14435;EPP=11909.2;EPPR=46316.2;GTI=3;LEN=1;MEANALT=1.09524;MQM=47.4211;MQMR=47.3258;NS=94;NUMALT=1;ODDS=0.765166;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=193839;QR=766164;RO=21372;RPL=5483;RPP=11909.2;RPPR=46316.2;RPR=0;RUN=1;SAF=0;SAP=11909.2;SAR=5483;SRF=0;SRP=46411.7;SRR=21372;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:66:66,0:66:2376:0:0:0,-19.868,-210.835	0/0:272:272,0:272:9772:0:0:0,-81.8802,-864.961	0/0:222:222,0:222:7959:0:0:0,-66.8287,-708.308	0/0:217:217,0:217:7795:0:0:0,-65.3235,-693.633	0/1:83:45,38:45:1599:38:1352:-96.3156,0,-118.356	0/1:67:37,29:37:1328:29:1040:-72.8885,0,-98.5421	0/1:57:24,33:24:860:33:1172:-87.9418,0,-60.0374	0/0:94:94,0:94:3357:0:0:0,-28.2968,-298.575	0/0:81:81,0:81:2912:0:0:0,-24.3834,-258.415	0/0:55:55,0:55:1967:0:0:0,-16.5566,-173.027	0/0:543:542,1:542:19433:1:36:0,-159.886,-1722.46	0/0:75:75,0:75:2687:0:0:0,-22.5772,-239.539	0/0:50:50,0:50:1792:0:0:0,-15.0515,-159.138	0/1:81:38,43:38:1368:43:1532:-112.684,0,-97.606	0/1:41:23,18:23:820:18:643:-45.1699,0,-61.1498	0/1:72:40,32:40:1440:32:1131:-79.8959,0,-107.011	0/0:47:47,0:47:1688:0:0:0,-14.1484,-150.873	0/1:21:10,11:10:360:11:396:-28.8808,0,-26.1364	0/0:150:150,0:150:5388:0:0:0,-45.1545,-478.554	0/1:130:65,65:65:2327:65:2294:-165.2,0,-168.395	0/1:116:58,58:58:2080:58:2055:-149.341,0,-150.145	0/0:107:107,0:107:3840:0:0:0,-32.2102,-342.405	0/0:87:86,1:86:3088:1:36:0,-22.6162,-269.859	0/1:42:24,18:24:864:18:623:-43.327,0,-64.6623	0/0:61:61,0:61:2184:0:0:0,-18.3628,-195.472	0/0:205:205,0:205:7355:0:0:0,-61.7111,-653.38	0/0:147:147,0:147:5284:0:0:0,-44.2514,-470.879	0/0:16:16,0:16:576:0:0:0,-4.81648,-51.5376	0/1:205:82,123:82:2931:123:4355:-327.018,0,-199.351	0/0:413:413,0:413:14807:0:0:0,-124.325,-1319.42	0/1:184:73,111:73:2577:111:3910:-293.328,0,-175.249	0/0:813:813,0:813:29162:0:0:0,-244.737,-2598.7	0/0:978:977,1:977:35030:1:36:0,-290.829,-3115.96	0/0:832:831,1:831:29794:1:36:0,-246.954,-2639.83	0/1:2587:1740,846:1740:62341:846:29942:-1880.32,0,-4749.04	0/0:2861:2858,3:2858:102332:3:104:0,-851.615,-9077.88	0/0:127:127,0:127:4560:0:0:0,-38.2308,-406.325	0/0:169:169,0:169:6056:0:0:0,-50.8741,-539.541	0/0:358:358,0:358:12855:0:0:0,-107.769,-1141.66	0/1:923:440,482:440:15773:482:17058:-1243.12,0,-1125.86	0/0:149:149,0:149:5318:0:0:0,-44.8535,-475.544	0/0:242:242,0:242:8692:0:0:0,-72.8493,-773.217	0/1:244:145,99:145:5196:99:3496:-237.012,0,-390.986	0/1:26:16,10:16:572:10:348:-23.6426,0,-43.1075	0/1:31:14,17:14:504:17:608:-45.0239,0,-35.7232	0/0:120:120,0:120:4304:0:0:0,-36.1236,-383.203	0/1:108:60,48:60:2151:48:1695:-118.625,0,-158.13	0/0:144:144,0:144:5159:0:0:0,-43.3483,-459.344	0/0:51:51,0:51:1832:0:0:0,-15.3525,-164.014	0/0:73:73,0:73:2610:0:0:0,-21.9752,-232.516	0/0:84:84,0:84:3001:0:0:0,-25.2865,-267.007	0/1:1464:654,810:654:23440:810:28684:-2115.43,0,-1647.86	0/0:129:128,1:128:4604:1:36:0,-35.2661,-404.097	0/0:94:94,0:94:3363:0:0:0,-28.2968,-299.18	0/1:855:427,428:427:15335:428:15139:-1085.87,0,-1105.14	0/1:106:52,54:52:1868:54:1859:-134.487,0,-133.476	0/0:41:41,0:41:1476:0:0:0,-12.3422,-132.104	0/1:1154:529,624:529:18984:624:22053:-1616.09,0,-1341.83	0/1:764:318,446:318:11366:446:15754:-1174.35,0,-781.039	0/0:77:77,0:77:2750:0:0:0,-23.1793,-243.81	0/0:105:105,0:105:3776:0:0:0,-31.6081,-336.282	0/0:1004:1003,1:1003:35966:1:36:0,-298.661,-3189.91	0/0:75:75,0:75:2691:0:0:0,-22.5772,-239.155	0/1:106:45,61:45:1620:61:2167:-161.343,0,-112.481	0/0:43:42,1:42:1494:1:32:0,-9.75286,-130.452	0/0:52:52,0:52:1856:0:0:0,-15.6536,-164.825	0/1:156:72,84:72:2583:84:2971:-218.552,0,-182.973	0/0:128:127,1:127:4550:1:36:0,-34.9584,-400.673	0/0:631:631,0:631:22667:0:0:0,-189.95,-2019.68	0/0:31:31,0:31:1116:0:0:0,-9.33193,-99.8602	0/1:44:17,27:17:608:27:943:-71.0115,0,-41.46	0/0:569:569,0:569:20405:0:0:0,-171.286,-1815.55	0/0:80:80,0:80:2855:0:0:0,-24.0824,-253.533	0/1:63:35,28:35:1256:28:969:-67.8596,0,-91.8791	0/0:186:186,0:186:6680:0:0:0,-55.9916,-597.505	0/0:105:105,0:105:3764:0:0:0,-31.6081,-335.129	0/0:243:243,0:243:8717:0:0:0,-73.1503,-771.529	0/0:59:59,0:59:2107:0:0:0,-17.7608,-187.775	0/0:659:658,1:658:23572:1:36:0,-194.812,-2086.95	0/0:64:64,0:64:2296:0:0:0,-19.2659,-205.093	0/1:83:40,43:40:1436:43:1520:-110.988,0,-102.453	0/0:144:144,0:144:5164:0:0:0,-43.3483,-460.434	0/0:50:50,0:50:1800:0:0:0,-15.0515,-161.188	0/0:55:55,0:55:1971:0:0:0,-16.5566,-176.04	0/0:33:33,0:33:1180:0:0:0,-9.93399,-104.59	0/0:87:87,0:87:3115:0:0:0,-26.1896,-277.904	0/1:26:12,14:12:432:14:496:-36.7817,0,-30.5695	0/0:59:59,0:59:2120:0:0:0,-17.7608,-188.481	0/0:64:64,0:64:2292:0:0:0,-19.2659,-203.675	0/0:622:621,1:621:22281:1:36:0,-183.662,-1980.76	0/1:1486:765,721:765:27440:721:25465:-1821.66,0,-1998.89	0/1:60:11,49:11:392:49:1709:-134.446,0,-17.333	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.3716	0/0:65:65,0:65:2328:0:0:0,-19.5669,-208.21
chr02	19637682	.	C	T	18752.8	PASS	AB=0.370286;ABP=518.466;AC=30;AF=0.159574;AN=188;AO=1312;CIGAR=1X;DP=13715;DPB=13715;DPRA=0.812349;EPP=2851.98;EPPR=26892.4;GTI=5;LEN=1;MEANALT=1.02857;MQM=59.654;MQMR=52.1708;NS=94;NUMALT=1;ODDS=7.94219;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46689;QR=438682;RO=12399;RPL=3;RPP=2825.98;RPPR=1534.35;RPR=1309;RUN=1;SAF=3;SAP=2825.98;SAR=1309;SRF=4725;SRP=1526.07;SRR=7674;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:81:81,0:81:2831:0:0:0,-24.3834,-247.941	0/0:210:210,0:210:7385:0:0:0,-63.2163,-654.261	0/0:194:194,0:194:6884:0:0:0,-58.3998,-602.271	0/0:329:329,0:329:11619:0:0:0,-99.0389,-1028.8	0/1:93:69,24:69:2423:24:856:-49.3653,0,-185.791	0/1:78:48,30:48:1716:30:1076:-73.6643,0,-127.004	0/0:166:166,0:166:5883:0:0:0,-49.971,-522.787	0/0:293:293,0:293:10380:0:0:0,-88.2018,-908.976	0/0:183:183,0:183:6457:0:0:0,-55.0885,-563.475	0/0:173:173,0:173:6166:0:0:0,-52.0782,-550.897	0/0:125:125,0:125:4398:0:0:0,-37.6287,-390.149	0/0:178:178,0:178:6256:0:0:0,-53.5833,-546.43	0/0:165:165,0:165:5803:0:0:0,-49.6699,-505.194	0/1:107:63,44:63:2206:44:1551:-107.645,0,-162.974	0/1:120:68,52:68:2388:52:1850:-130.649,0,-175.961	0/1:73:48,25:48:1658:25:888:-58.1909,0,-123.2	0/0:146:146,0:146:5136:0:0:0,-43.9504,-456.458	0/1:103:67,36:67:2368:36:1288:-85.2132,0,-179.717	0/0:85:85,0:85:3026:0:0:0,-25.5875,-266.374	0/1:187:132,55:132:4711:55:1968:-121,0,-359.346	0/1:205:111,94:111:3914:94:3372:-241.87,0,-286.746	0/0:145:145,0:145:5147:0:0:0,-43.6493,-458.249	0/0:119:119,0:119:4223:0:0:0,-35.8226,-376.144	0/1:178:101,77:101:3585:77:2732:-191.832,0,-266.148	0/0:163:162,1:162:5727:1:36:0,-45.4696,-502.708	0/0:391:391,0:391:13896:0:0:0,-117.703,-1235.61	0/0:182:181,0:181:6415:0:0:0,-54.4864,-573.302	0/0:96:96,0:96:3351:0:0:0,-28.8989,-294.92	0/1:338:220,118:220:7862:118:4178:-274.312,0,-598.781	0/0:154:154,0:154:5467:0:0:0,-46.3586,-484.408	0/1:92:68,24:68:2436:24:844:-48.4779,0,-189.858	0/0:21:21,0:21:724:0:0:0,-6.32163,-64.7141	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.2612	0/0:12:12,0:12:424:0:0:0,-3.61236,-38.4964	0/1:13:10,3:10:356:3:108:-6.16178,0,-28.1077	0/0:10:10,0:10:345:0:0:0,-3.0103,-29.8568	0/0:359:359,0:359:12696:0:0:0,-108.07,-1130.98	0/0:164:164,0:164:5854:0:0:0,-49.3689,-523.627	0/1:124:78,45:78:2762:45:1600:-106.897,0,-202.518	0/1:4:3,1:3:93:1:36:-2.39415,0,-7.19923	0/0:213:212,0:212:7482:0:0:0,-63.8184,-658.762	0/0:53:53,0:53:1883:0:0:0,-15.9546,-166.174	0/0:188:188,0:188:6687:0:0:0,-56.5936,-593.427	0/0:146:146,0:146:5147:0:0:0,-43.9504,-458.5	0/1:112:66,46:66:2290:46:1615:-111.911,0,-168.983	0/0:155:155,0:155:5511:0:0:0,-46.6596,-487.138	0/1:161:87,74:87:3061:74:2625:-188.027,0,-218.789	0/0:211:211,0:211:7496:0:0:0,-63.5173,-661.514	0/0:160:160,0:160:5687:0:0:0,-48.1648,-505.504	0/0:279:279,0:279:9944:0:0:0,-83.9874,-885.632	0/0:207:207,0:207:7339:0:0:0,-62.3132,-653.123	0/1:8:1,7:1:36:7:248:-20.256,0,-1.19003	0/0:164:164,0:164:5865:0:0:0,-49.3689,-511.587	0/0:67:67,0:67:2379:0:0:0,-20.169,-209.509	0/1:6:2,4:2:68:4:144:-11.5074,0,-4.65153	0/1:170:104,66:104:3677:66:2347:-160.307,0,-273.356	0/0:39:39,0:39:1342:0:0:0,-11.7402,-118.784	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.4709	0/1:25:10,15:10:343:15:540:-41.3931,0,-23.5874	0/0:210:210,0:210:7467:0:0:0,-63.2163,-652.377	0/0:162:162,0:162:5698:0:0:0,-48.7669,-505.214	0/0:18:18,0:18:639:0:0:0,-5.41854,-57.7517	0/0:212:211,1:211:7463:1:36:0,-60.2205,-659.554	0/1:233:144,89:144:5091:89:3173:-215.477,0,-384.709	0/1:137:124,13:124:4399:13:464:-0.856401,0,-349.268	0/0:111:111,0:111:3963:0:0:0,-33.4143,-351.954	0/1:267:169,98:169:5984:98:3485:-233.474,0,-453.721	0/0:186:185,1:185:6573:1:36:0,-52.3933,-576.749	0/0:93:93,0:93:3277:0:0:0,-27.9958,-290.109	0/0:148:147,0:147:5218:0:0:0,-44.2514,-464.261	0/1:145:95,50:95:3366:50:1784:-117.188,0,-255.354	0/0:25:25,0:25:900:0:0:0,-7.52575,-80.3694	0/0:79:79,0:79:2798:0:0:0,-23.7814,-243.239	0/1:98:64,34:64:2284:34:1204:-79.1181,0,-169.868	0/0:224:224,0:224:7887:0:0:0,-67.4307,-693.963	0/0:243:243,0:243:8556:0:0:0,-73.1503,-760.988	0/0:129:129,0:129:4560:0:0:0,-38.8329,-399.454	0/0:211:210,1:210:7398:1:36:0,-59.9191,-644.275	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8359	0/0:161:159,2:159:5666:2:72:0,-41.6291,-498.45	0/1:153:91,62:91:3213:62:2212:-153.287,0,-234.556	0/0:282:282,0:282:10008:0:0:0,-84.8905,-890.723	0/0:152:152,0:152:5328:0:0:0,-45.7566,-475.012	0/0:166:166,0:166:5875:0:0:0,-49.971,-522.514	0/0:210:210,0:210:7434:0:0:0,-63.2163,-662.132	0/0:289:289,0:289:10187:0:0:0,-86.9977,-905.327	0/1:61:36,25:36:1287:25:892:-62.2278,0,-95.1039	0/0:140:140,0:140:4929:0:0:0,-42.1442,-429.329	0/0:162:162,0:162:5740:0:0:0,-48.7669,-501.851	0/0:91:91,0:91:3203:0:0:0,-27.3937,-282.963	0/1:115:89,26:89:3119:26:933:-49.6689,0,-240.073	0/1:112:44,68:44:1547:68:2424:-184.694,0,-104.687	0/0:162:162,0:162:5655:0:0:0,-48.7669,-499.311	0/0:246:246,0:246:8686:0:0:0,-74.0534,-768.559
chr02	19637755	.	GGGG	CGGC,AGGC	388786	PASS	AB=0.514849,0.479948;ABP=11.8454,19.121;AC=159,29;AF=0.845745,0.154255;AN=188;AO=15461,2243;CIGAR=1X2M1X,1X2M1X;DP=17779;DPB=17779.5;DPRA=0,1.07651;EPP=33576.1,4873.62;EPPR=0;GTI=2;LEN=4,4;MEANALT=2.20213,2.86957;MQM=59.9215,59.8841;MQMR=0;NS=94;NUMALT=2;ODDS=2.60172;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=1;QA=547224,79411;QR=0;RO=0;RPL=0,0;RPP=33576.1,4873.62;RPPR=0;RPR=15461,2243;RUN=1,1;SAF=15461,2243;SAP=33576.1,4873.62;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:171:0,170,0:0:0:170,0:6000,0:-539.899,-51.1751,0,-539.899,-51.1751,-539.899	1/1:178:0,176,1:0:0:176,1:6253,25:-562.415,-52.9813,0,-560.467,-51.088,-560.166	1/1:534:0,533,0:0:0:533,0:18779,0:-1688.77,-160.449,0,-1688.77,-160.449,-1688.77	1/1:508:0,504,1:0:0:504,1:17777,36:-1598.09,-151.719,0,-1595.16,-148.782,-1594.85	1/2:109:0,57,52:0:0:57,52:2018,1850:-315.506,-151.127,-133.968,-164.734,0,-149.081	1/2:90:0,37,53:0:0:37,53:1304,1879:-259.602,-153.433,-142.295,-106.522,0,-90.5673	1/1:194:0,193,0:0:0:193,0:6841,0:-615.388,-58.0988,0,-615.388,-58.0988,-615.388	1/1:312:0,310,1:0:0:310,1:10940,36:-984.151,-93.3193,0,-981.214,-90.3519,-980.913	1/1:138:0,136,0:0:0:136,0:4798,0:-431.627,-40.9401,0,-431.627,-40.9401,-431.627	1/1:149:0,147,0:0:0:147,0:5172,0:-464.977,-44.2514,0,-464.977,-44.2514,-464.977	1/1:101:0,101,0:0:0:101,0:3579,0:-322.318,-30.404,0,-322.318,-30.404,-322.318	1/1:143:0,142,0:0:0:142,0:5022,0:-451.669,-42.7463,0,-451.669,-42.7463,-451.669	1/1:101:0,101,0:0:0:101,0:3578,0:-322.226,-30.404,0,-322.226,-30.404,-322.226	1/2:96:0,44,51:0:0:44,51:1575,1817:-276.534,-148.094,-134.849,-128.437,0,-113.084	1/2:91:0,55,36:0:0:55,36:1955,1286:-264.517,-105.204,-88.6472,-159.67,0,-148.833	1/2:99:0,53,45:0:0:53,45:1874,1608:-283.81,-131.18,-115.225,-152.772,0,-139.225	1/1:51:0,51,0:0:0:51,0:1810,0:-163.181,-15.3525,0,-163.181,-15.3525,-163.181	1/2:59:0,27,30:0:0:27,30:953,1070:-164.853,-87.2499,-79.1221,-77.625,0,-68.5941	1/1:46:0,46,0:0:0:46,0:1642,0:-148.068,-13.8474,0,-148.068,-13.8474,-148.068	1/2:314:0,175,135:0:0:175,135:6212,4793:-896.546,-390.405,-337.725,-506.201,0,-465.562	1/2:343:0,178,164:0:0:178,164:6296,5798:-985.045,-472.239,-418.656,-512.848,0,-463.48	1/1:243:0,242,1:0:0:242,1:8604,36:-774.001,-72.8493,0,-771.064,-69.552,-770.763	1/1:387:0,380,4:0:0:380,4:13468,144:-1211.59,-114.391,0,-1199.84,-102.607,-1198.64	1/2:134:0,70,63:0:0:70,63:2483,2224:-383.397,-181.099,-160.027,-202.292,0,-183.327	1/1:188:0,188,0:0:0:188,0:6662,0:-599.665,-56.5936,0,-599.665,-56.5936,-599.665	1/1:522:0,519,0:0:0:519,0:18408,0:-1656.05,-156.235,0,-1656.05,-156.235,-1656.05	1/1:430:0,430,0:0:0:430,0:15173,0:-1365.3,-129.443,0,-1365.3,-129.443,-1365.3	1/1:53:0,53,0:0:0:53,0:1902,0:-171.458,-15.9546,0,-171.458,-15.9546,-171.458	1/2:501:0,244,256:0:0:244,256:8642,9119:-1447.24,-743.26,-669.809,-703.974,0,-626.91	1/1:267:0,266,0:0:0:266,0:9413,0:-846.762,-80.074,0,-846.762,-80.074,-846.762	1/2:282:0,165,115:0:0:165,115:5844,4060:-805.941,-329.89,-280.221,-476.043,0,-441.425	1/1:26:0,25,0:0:0:25,0:898,0:-80.6328,-7.52575,0,-80.6328,-7.52575,-80.6328	1/1:75:0,75,0:0:0:75,0:2675,0:-240.995,-22.5773,0,-240.995,-22.5773,-240.995	1/1:17:0,17,0:0:0:17,0:606,0:-54.8715,-5.11751,0,-54.8715,-5.11751,-54.8715	1/2:19:0,13,5:0:0:13,5:463,174:-51.8804,-14.1383,-10.2249,-37.7344,0,-36.2292	1/1:68:0,67,0:0:0:67,0:2372,0:-213.44,-20.169,0,-213.44,-20.169,-213.44	1/1:294:0,294,0:0:0:294,0:10406,0:-936.461,-88.5028,0,-936.461,-88.5028,-936.461	1/1:268:0,266,1:0:0:266,1:9379,29:-843.763,-80.074,0,-841.455,-77.8003,-841.154	1/2:90:0,43,47:0:0:43,47:1525,1647:-258.608,-134.367,-121.423,-124.593,0,-110.444	1/2:9:0,5,4:0:0:5,4:178,142:-26.4333,-11.9251,-10.4199,-14.8635,0,-13.6594	1/1:250:0,249,0:0:0:249,0:8835,0:-794.772,-74.9565,0,-794.772,-74.9565,-794.772	1/1:60:0,60,0:0:0:60,0:2141,0:-192.958,-18.0618,0,-192.958,-18.0618,-192.958	1/1:410:0,410,0:0:0:410,0:14525,0:-1306.99,-123.422,0,-1306.99,-123.422,-1306.99	1/1:98:0,97,1:0:0:97,1:3438,36:-309.276,-29.1999,0,-306.338,-25.9027,-306.037	1/2:69:0,32,36:0:0:32,36:1148,1287:-198.576,-104.937,-95.3041,-93.6374,0,-82.8003	1/1:311:0,309,0:0:0:309,0:10925,0:-982.832,-93.0183,0,-982.832,-93.0183,-982.832	1/2:284:0,150,134:0:0:150,134:5288,4706:-813.724,-383.368,-338.214,-430.707,0,-390.369	1/1:412:0,410,1:0:0:410,1:14505,30:-1304.89,-123.422,0,-1302.49,-121.054,-1302.19	1/1:252:0,248,2:0:0:248,2:8749,71:-787.051,-74.6554,0,-781.266,-68.8728,-780.664	1/1:234:0,234,0:0:0:234,0:8311,0:-747.998,-70.441,0,-747.998,-70.441,-747.998	1/1:235:0,232,0:0:0:232,0:8182,0:-736.056,-69.839,0,-736.056,-69.839,-736.056	1/2:47:0,25,21:0:0:25,21:893,749:-133.862,-61.0544,-53.5287,-72.8049,0,-66.4833	1/1:277:0,277,0:0:0:277,0:9824,0:-884.115,-83.3853,0,-884.115,-83.3853,-884.115	1/1:238:0,238,0:0:0:238,0:8437,0:-759.339,-71.6451,0,-759.339,-71.6451,-759.339	1/2:33:0,12,21:0:0:12,21:430,733:-95.0428,-59.9698,-56.3575,-35.4278,0,-29.1062	1/2:286:0,143,142:0:0:143,142:5038,5018:-818.648,-4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chr02	19979478	.	G	C	26010.4	PASS	AB=0.489264;ABP=6.27417;AC=29;AF=0.154255;AN=188;AO=1604;CIGAR=1X;DP=12410;DPB=12410;DPRA=0.876916;EPP=3486.05;EPPR=23428.9;GTI=0;LEN=1;MEANALT=1.24242;MQM=59.9963;MQMR=59.9961;NS=94;NUMALT=1;ODDS=13.9233;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56749;QR=383820;RO=10792;RPL=1604;RPP=3486.05;RPPR=23428.9;RPR=0;RUN=1;SAF=1604;SAP=3486.05;SAR=0;SRF=10792;SRP=23437.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/0:193:193,0:193:6860:0:0:0,-58.0988,-617.47	0/0:315:315,0:315:11195:0:0:0,-94.8244,-1007.45	0/0:337:336,0:336:11918:0:0:0,-101.146,-1072.12	0/1:69:34,35:34:1216:35:1251:-92.1232,0,-88.9755	0/1:80:33,47:33:1180:47:1670:-126.503,0,-82.4256	0/0:205:205,0:205:7260:0:0:0,-61.7111,-653.458	0/0:185:185,0:185:6550:0:0:0,-55.6905,-588.812	0/0:148:148,0:148:5261:0:0:0,-44.5524,-473.626	0/0:136:136,0:136:4839:0:0:0,-40.9401,-435.664	0/0:49:49,0:49:1720:0:0:0,-14.7505,-155.082	0/0:70:70,0:70:2500:0:0:0,-21.0721,-225.253	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.78	0/1:55:22,33:22:784:33:1163:-88.4195,0,-54.3273	0/1:65:22,43:22:779:43:1515:-117.075,0,-50.8651	0/1:36:24,12:24:848:12:432:-28.3841,0,-65.8026	0/0:50:50,0:50:1773:0:0:0,-15.0515,-159.851	0/1:50:25,25:25:887:25:881:-64.5544,0,-65.0966	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/1:253:150,103:150:5321:103:3640:-251.643,0,-402.865	0/1:186:74,112:74:2626:112:3960:-300.599,0,-180.596	0/0:220:220,0:220:7815:0:0:0,-66.2266,-703.384	0/0:166:166,0:166:5936:0:0:0,-49.971,-534.346	0/1:219:95,124:95:3382:124:4415:-331.596,0,-238.67	0/0:106:106,0:106:3759:0:0:0,-31.9092,-338.51	0/0:444:443,0:443:15843:0:0:0,-133.356,-1425.2	0/0:319:319,0:319:11353:0:0:0,-96.0286,-1021.66	0/0:37:37,0:37:1316:0:0:0,-11.1381,-118.742	0/1:389:223,163:223:7884:163:5763:-402.231,0,-593.035	0/0:116:116,0:116:4114:0:0:0,-34.9195,-370.447	0/1:202:121,81:121:4276:81:2874:-198.089,0,-324.213	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:32:32,0:32:1116:0:0:0,-9.63296,-100.745	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:18:7,11:7:237:11:383:-29.3847,0,-16.2405	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/0:208:208,0:208:7374:0:0:0,-62.6142,-663.711	0/0:349:348,0:348:12360:0:0:0,-104.758,-1111.89	0/1:87:40,47:40:1440:47:1652:-122.775,0,-103.708	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/0:165:165,0:165:5868:0:0:0,-49.6699,-528.233	0/0:48:48,0:48:1699:0:0:0,-14.4494,-153.195	0/0:133:133,0:133:4740:0:0:0,-40.037,-426.756	0/0:60:60,0:60:2147:0:0:0,-18.0618,-193.497	0/1:57:37,20:37:1320:20:712:-47.2479,0,-101.943	0/0:157:157,0:157:5615:0:0:0,-47.2617,-505.472	0/1:214:89,124:89:3155:124:4431:-334.482,0,-219.695	0/0:313:310,2:310:10956:2:72:0,-87.4445,-979.112	0/0:214:214,0:214:7621:0:0:0,-64.4204,-685.928	0/0:209:208,0:208:7434:0:0:0,-62.6142,-668.746	0/0:312:312,0:312:11095:0:0:0,-93.9214,-998.446	0/1:20:12,8:12:428:8:288:-20.2468,0,-32.8382	0/0:184:184,0:184:6560:0:0:0,-55.3895,-590.483	0/0:46:46,0:46:1641:0:0:0,-13.8474,-147.977	0/1:31:12,19:12:423:19:652:-49.6663,0,-29.0731	0/1:151:83,68:83:2940:68:2377:-168.73,0,-219.378	0/0:76:76,0:76:2714:0:0:0,-22.8783,-244.503	0/1:36:24,12:24:860:12:432:-28.3841,0,-66.8848	0/1:24:11,13:11:392:13:459:-34.4194,0,-28.3953	0/0:110:110,0:110:3929:0:0:0,-33.1133,-353.801	0/0:94:94,0:94:3355:0:0:0,-28.2968,-302.167	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:260:259,0:259:9233:0:0:0,-77.9668,-830.583	0/1:324:170,153:170:6068:153:5401:-388.633,0,-448.63	0/0:109:104,5:104:3687:5:176:0,-16.6272,-315.85	0/0:173:171,1:171:6102:1:36:0,-48.5387,-545.684	0/1:212:113,98:113:4015:98:3450:-246.837,0,-297.664	0/0:138:137,1:137:4864:1:36:0,-37.9439,-434.317	0/0:25:25,0:25:887:0:0:0,-7.52575,-80.1481	0/0:104:104,0:104:3736:0:0:0,-31.3071,-336.439	0/1:69:30,39:30:1068:39:1378:-103.546,0,-75.661	0/0:38:38,0:38:1350:0:0:0,-11.4391,-121.799	0/0:168:168,0:168:5970:0:0:0,-50.573,-537.408	0/1:101:49,52:49:1736:52:1816:-133.312,0,-126.118	0/0:246:246,0:246:8769:0:0:0,-74.0534,-789.202	0/0:253:253,0:253:9009:0:0:0,-76.1606,-810.789	0/0:151:151,0:151:5377:0:0:0,-45.4555,-484.063	0/0:148:148,0:148:5281:0:0:0,-44.5524,-475.426	0/0:43:43,0:43:1522:0:0:0,-12.9443,-137.272	0/0:192:192,0:192:6840:0:0:0,-57.7978,-615.672	0/1:119:68,50:68:2416:50:1777:-124.369,0,-181.852	0/0:364:364,0:364:12960:0:0:0,-109.575,-1166.22	0/0:68:68,0:68:2412:0:0:0,-20.47,-217.335	0/0:56:56,0:56:1989:0:0:0,-16.8577,-179.282	0/0:96:96,0:96:3413:0:0:0,-28.8989,-307.384	0/0:121:121,0:121:4310:0:0:0,-36.4246,-388.077	0/1:33:20,13:20:708:13:464:-32.1635,0,-54.1116	0/0:69:69,0:69:2443:0:0:0,-20.7711,-220.126	0/0:76:76,0:76:2680:0:0:0,-22.8783,-241.445	0/0:25:25,0:25:864:0:0:0,-7.52575,-78.0723	0/1:83:43,40:43:1523:40:1409:-102.12,0,-112.377	0/1:69:25,44:25:879:44:1568:-120.641,0,-58.6557	0/0:94:94,0:94:3344:0:0:0,-28.2968,-301.176	0/0:93:93,0:93:3283:0:0:0,-27.9958,-295.69
chr02	20413673	.	T	C	61040.8	PASS	AB=0.484373;ABP=18.8235;AC=30;AF=0.159574;AN=188;AO=3632;CIGAR=1X;DP=16822;DPB=16822;DPRA=1.90707;EPP=7725.63;EPPR=27630.8;GTI=5;LEN=1;MEANALT=1.06667;MQM=59.9813;MQMR=59.9939;NS=94;NUMALT=1;ODDS=0.745281;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129663;QR=471828;RO=13183;RPL=19;RPP=7725.63;RPPR=27630.8;RPR=3613;RUN=1;SAF=3632;SAP=7889.8;SAR=0;SRF=13183;SRP=28629.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:99:99,0:99:3533:0:0:0,-29.802,-318.178	0/0:74:73,1:73:2615:1:21:0,-20.1763,-233.497	0/0:124:124,0:124:4445:0:0:0,-37.3277,-400.218	0/1:59:42,17:42:1508:17:612:-37.6527,0,-118.254	0/1:21:3,18:3:108:18:644:-51.969,0,-3.75354	0/0:76:76,0:76:2724:0:0:0,-22.8783,-245.403	0/0:50:50,0:50:1785:0:0:0,-15.0515,-160.931	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:58:58,0:58:2069:0:0:0,-17.4597,-186.479	0/0:596:595,1:595:21330:1:36:0,-175.816,-1915.56	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/1:95:45,50:45:1597:50:1788:-132.605,0,-115.42	0/1:30:14,16:14:504:16:576:-43.1441,0,-36.6672	0/1:39:19,20:19:684:20:720:-53.3886,0,-50.1502	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.303	0/1:41:20,21:20:716:21:752:-55.664,0,-52.4255	0/0:191:191,0:191:6839:0:0:0,-57.4967,-615.579	0/1:76:43,33:43:1548:33:1169:-82.6376,0,-116.735	0/1:71:26,45:26:932:45:1603:-123.186,0,-62.8257	0/0:53:53,0:53:1896:0:0:0,-15.9546,-170.918	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:59:26,33:26:917:33:1188:-89.4678,0,-65.0838	0/0:21:21,0:21:737:0:0:0,-6.32163,-66.6506	0/0:199:199,0:199:7107:0:0:0,-59.905,-639.685	0/0:102:102,0:102:3638:0:0:0,-30.7051,-327.622	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:146:146,0:146:5243:0:0:0,-43.9504,-472.005	0/0:98:98,0:98:3528:0:0:0,-29.5009,-317.728	0/1:52:29,23:29:1044:23:824:-58.8298,0,-78.6212	0/0:519:516,0:516:18512:0:0:0,-155.331,-1665.39	0/0:684:684,0:684:24467:0:0:0,-205.905,-2201.35	0/0:724:724,0:724:25858:0:0:0,-217.946,-2326.49	0/1:1881:1048,833:1048:37511:833:29694:-2105.34,0,-2808.51	0/0:461:460,1:460:16473:1:36:0,-135.177,-1478.63	0/0:109:108,1:108:3876:1:36:0,-29.214,-345.436	0/0:139:139,0:139:4942:0:0:0,-41.8432,-444.933	0/1:482:240,242:240:8569:242:8621:-630.79,0,-626.11	0/1:426:218,207:218:7751:207:7399:-537.658,0,-569.326	0/0:150:149,1:149:5336:1:32:0,-41.9552,-477.174	0/0:212:212,0:212:7620:0:0:0,-63.8184,-685.833	0/0:50:50,0:50:1779:0:0:0,-15.0515,-160.392	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/1:37:19,18:19:684:18:648:-47.5138,0,-50.7522	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:63:30,33:30:1065:33:1184:-87.9034,0,-77.1949	0/0:105:104,1:104:3700:1:36:0,-28.0099,-329.603	0/0:59:59,0:59:2100:0:0:0,-17.7608,-189.27	0/0:99:99,0:99:3537:0:0:0,-29.802,-318.538	0/0:86:86,0:86:3069:0:0:0,-25.8886,-276.437	0/1:599:308,291:308:11014:291:10389:-754.612,0,-810.836	0/0:108:108,0:108:3876:0:0:0,-32.5112,-349.034	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/1:490:268,222:268:9556:222:7899:-563.412,0,-712.494	0/1:57:27,30:27:972:30:1068:-79.2734,0,-70.6392	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:467:260,206:260:9325:206:7311:-517.402,0,-698.571	0/1:687:325,362:325:11661:362:12917:-955.521,0,-842.533	0/0:121:121,0:121:4294:0:0:0,-36.4246,-386.637	0/1:105:49,56:49:1760:56:2016:-150.105,0,-127.076	0/0:332:331,1:331:11848:1:36:0,-96.3437,-1062.58	0/0:88:85,3:85:3048:3:108:0,-16.4155,-264.474	0/1:107:57,50:57:2052:50:1783:-128.542,0,-152.741	0/0:58:56,2:56:2012:2:72:0,-10.623,-174.516	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/1:83:32,51:32:1152:51:1832:-140.175,0,-79.0047	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.453	0/0:374:374,0:374:13436:0:0:0,-112.585,-1209.02	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/1:82:41,41:41:1464:41:1472:-108.092,0,-107.372	0/0:415:414,1:414:14716:1:36:0,-121.329,-1320.58	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.901	0/1:44:30,14:30:1080:14:500:-32.0909,0,-84.2679	0/0:114:114,0:114:4072:0:0:0,-34.3174,-366.668	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.855	0/0:90:90,0:90:3205:0:0:0,-27.0927,-288.672	0/0:80:78,2:78:2804:2:72:0,-17.2457,-245.762	0/0:544:544,0:544:19468:0:0:0,-163.76,-1751.66	0/0:52:52,0:52:1864:0:0:0,-15.6536,-167.182	0/1:42:22,20:22:788:20:703:-50.9509,0,-58.6015	0/0:85:82,3:82:2925:3:108:0,-15.5124,-253.408	0/0:81:81,0:81:2912:0:0:0,-24.3834,-262.315	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.818	0/1:68:33,35:33:1180:35:1251:-92.4251,0,-86.038	0/0:80:79,1:79:2836:1:36:0,-20.4841,-251.88	0/1:17:5,12:5:180:12:417:-32.7425,0,-11.4346	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/0:49:49,0:49:1751:0:0:0,-14.7505,-157.873	0/0:577:576,1:576:20692:1:36:0,-170.096,-1858.16	0/1:1130:546,582:546:19521:582:20866:-1537.57,0,-1416.58	0/1:45:15,30:15:540:30:1080:-83.9669,0,-35.3902	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/0:43:42,1:42:1512:1:36:0,-9.34601,-132.776
chr02	20642315	.	ATTTG	TTTTG,TTTTC	163174	PASS	AB=0.389732,0.608929;ABP=239.581,233.869;AC=158,30;AF=0.840426,0.159574;AN=188;AO=6032,1383;CIGAR=1X4M,1X3M1X;DP=7431;DPB=7431.2;DPRA=0,1.02767;EPP=13101.3,3006.16;EPPR=5.18177;GTI=0;LEN=1,5;MEANALT=1.56383,2.15789;MQM=59.9649,59.9205;MQMR=60;NS=94;NUMALT=2;ODDS=1.19458;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=215731,48451;QR=35;RO=1;RPL=0,0;RPP=13101.3,3006.16;RPPR=5.18177;RPR=6032,1383;RUN=1,1;SAF=0,0;SAP=13101.3,3006.16;SAR=6032,1383;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:56:0,56,0:0:0:56,0:1982,0:-178.651,-16.8577,0,-178.651,-16.8577,-178.651	1/1:48:0,48,0:0:0:48,0:1720,0:-155.085,-14.4494,0,-155.085,-14.4494,-155.085	1/1:134:0,134,0:0:0:134,0:4739,0:-426.667,-40.338,0,-426.667,-40.338,-426.667	1/1:183:0,183,0:0:0:183,0:6534,0:-588.112,-55.0885,0,-588.112,-55.0885,-588.112	1/2:56:0,10,46:0:0:10,46:341,1635:-161.256,-133.592,-130.581,-28.0075,0,-14.1601	1/2:45:0,19,26:0:0:19,26:684,931:-132.094,-76.2822,-70.5626,-56.1708,0,-48.344	1/1:145:0,145,0:0:0:145,0:5182,0:-466.517,-43.6494,0,-466.517,-43.6494,-466.517	1/1:74:0,73,1:0:0:73,1:2609,34:-234.717,-21.9752,0,-231.959,-18.8773,-231.658	1/1:81:0,81,0:0:0:81,0:2878,0:-259.254,-24.3834,0,-259.254,-24.3834,-259.254	1/1:41:0,41,0:0:0:41,0:1472,0:-132.776,-12.3422,0,-132.776,-12.3422,-132.776	1/1:79:0,79,0:0:0:79,0:2821,0:-254.128,-23.7814,0,-254.128,-23.7814,-254.128	1/1:67:0,67,0:0:0:67,0:2404,0:-216.616,-20.169,0,-216.616,-20.169,-216.616	1/1:58:0,58,0:0:0:58,0:2080,0:-187.47,-17.4597,0,-187.47,-17.4597,-187.47	1/2:117:0,55,62:0:0:55,62:1957,2178:-337.111,-177.617,-161.061,-159.847,0,-141.183	1/2:48:0,18,30:0:0:18,30:648,1036:-137.124,-84.2451,-78.8266,-53.2333,0,-44.2024	1/2:67:0,29,38:0:0:29,38:1044,1312:-192.13,-106.938,-98.2082,-85.5449,0,-74.1058	1/1:35:0,35,0:0:0:35,0:1260,0:-113.705,-10.5361,0,-113.705,-10.5361,-113.705	1/2:19:0,7,12:0:0:7,12:244,424:-54.7267,-34.8846,-32.7774,-20.1922,0,-16.5799	1/1:35:0,35,0:0:0:35,0:1256,0:-113.345,-10.5361,0,-113.345,-10.5361,-113.345	1/2:111:0,26,85:0:0:26,85:921,2973:-317.244,-242.219,-234.392,-75.3784,0,-49.7909	1/2:282:0,117,165:0:0:117,165:4174,5782:-811.092,-470.832,-435.612,-340.614,0,-290.944	1/1:104:0,103,0:0:0:103,0:3650,0:-328.453,-31.0061,0,-328.453,-31.0061,-328.453	1/1:79:1,77,0:1:35:77,0:2768,0:-245.891,-20.3016,0,-246.192,-23.1793,-249.04	1/2:31:0,9,22:0:0:9,22:320,757:-87.9059,-61.8249,-59.1156,-26.4331,0,-19.8104	1/1:49:0,49,0:0:0:49,0:1760,0:-158.684,-14.7505,0,-158.684,-14.7505,-158.684	1/1:136:0,136,0:0:0:136,0:4864,0:-437.911,-40.9401,0,-437.911,-40.9401,-437.911	1/1:197:0,197,0:0:0:197,0:7028,0:-632.175,-59.3029,0,-632.175,-59.3029,-632.175	1/1:20:0,20,0:0:0:20,0:720,0:-65.1288,-6.0206,0,-65.1288,-6.0206,-65.1288	1/1:123:0,123,0:0:0:123,0:4412,0:-397.249,-37.0267,0,-397.249,-37.0267,-397.249	1/1:150:0,150,0:0:0:150,0:5364,0:-482.89,-45.1545,0,-482.89,-45.1545,-482.89	1/2:175:0,81,94:0:0:81,94:2916,3307:-507.492,-269.558,-245.174,-238.291,0,-209.994	1/1:24:0,24,0:0:0:24,0:852,0:-77.0004,-7.22472,0,-77.0004,-7.22472,-77.0004	1/1:45:0,45,0:0:0:45,0:1605,0:-144.738,-13.5464,0,-144.738,-13.5464,-144.738	1/1:17:0,17,0:0:0:17,0:612,0:-55.4101,-5.11751,0,-55.4101,-5.11751,-55.4101	1/2:25:0,13,12:0:0:13,12:468,424:-73.074,-34.8841,-30.9708,-38.5463,0,-34.9339	1/1:31:0,31,0:0:0:31,0:1112,0:-100.39,-9.33193,0,-100.39,-9.33193,-100.39	1/1:125:0,124,0:0:0:124,0:4452,0:-400.559,-37.3277,0,-400.559,-37.3277,-400.559	1/1:135:0,133,0:0:0:133,0:4738,0:-426.267,-40.037,0,-426.267,-40.037,-426.267	1/2:69:0,24,44:0:0:24,44:860,1540:-195.428,-125.286,-118.061,-70.1374,0,-56.892	1/2:13:0,5,8:0:0:5,8:180,282:-38.0034,-23.3134,-21.8083,-15.0469,0,-12.6387	1/1:93:0,93,0:0:0:93,0:3323,0:-299.017,-27.9958,0,-299.017,-27.9958,-299.017	1/1:31:0,31,0:0:0:31,0:1116,0:-100.752,-9.33193,0,-100.752,-9.33193,-100.752	1/1:162:0,162,0:0:0:162,0:5771,0:-519.501,-48.7669,0,-519.501,-48.7669,-519.501	1/1:26:0,26,0:0:0:26,0:932,0:-84.1989,-7.82678,0,-84.1989,-7.82678,-84.1989	1/2:36:0,13,23:0:0:13,23:464,800:-103.225,-65.3942,-61.4808,-38.1841,0,-31.2604	1/1:48:0,48,0:0:0:48,0:1728,0:-155.805,-14.4494,0,-155.805,-14.4494,-155.805	1/2:108:0,46,61:0:0:46,61:1629,2156:-308.282,-175.586,-161.739,-132.69,0,-114.327	1/1:134:0,129,5:0:0:129,5:4617,179:-415.334,-38.8329,0,-400.737,-23.8776,-399.231	1/1:67:0,67,0:0:0:67,0:2408,0:-216.976,-20.169,0,-216.976,-20.169,-216.976	1/1:84:0,84,0:0:0:84,0:3016,0:-271.67,-25.2865,0,-271.67,-25.2865,-271.67	1/1:51:0,51,0:0:0:51,0:1832,0:-165.161,-15.3525,0,-165.161,-15.3525,-165.161	1/2:28:0,5,23:0:0:5,23:180,806:-80.6252,-65.9364,-64.4312,-15.0469,0,-8.12322	1/1:105:0,105,0:0:0:105,0:3756,0:-338.24,-31.6082,0,-338.24,-31.6082,-338.24	1/1:54:0,54,0:0:0:54,0:1932,0:-174.156,-16.2556,0,-174.156,-16.2556,-174.156	1/2:9:0,3,6:0:0:3,6:108,214:-26.615,-17.8016,-16.8986,-9.17208,0,-7.3659	1/2:84:0,30,54:0:0:30,54:1076,1880:-240.99,-153.223,-144.192,-88.122,0,-71.8663	1/1:47:0,46,1:0:0:46,1:1648,36:-148.249,-13.8474,0,-145.311,-10.5501,-145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chr02	20642328	.	T	G	128190	PASS	AB=0.387681;ABP=244.956;AC=158;AF=0.840426;AN=188;AO=5957;CIGAR=1X;DP=7331;DPB=7331;DPRA=0;EPP=12938.5;EPPR=2964.92;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9577;MQMR=59.9716;NS=94;NUMALT=1;ODDS=1.14465;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=210566;QR=49206;RO=1372;RPL=0;RPP=12938.5;RPPR=2964.92;RPR=5957;RUN=1;SAF=0;SAP=12938.5;SAR=5957;SRF=0;SRP=2982.27;SRR=1372;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:53:0,53:0:0:53:1904:-171.638,-15.9546,0	1/1:47:0,47:0:0:47:1650:-148.784,-14.1484,0	1/1:133:0,132:0:0:132:4657:-418.938,-39.736,0	1/1:180:0,180:0:0:180:6368:-573.188,-54.1854,0	0/1:54:44,10:44:1584:10:351:-15.6711,0,-126.596	0/1:45:26,19:26:932:19:665:-46.6264,0,-70.6525	1/1:143:0,143:0:0:143:5018:-451.772,-43.0473,0	1/1:71:1,70:1:36:70:2467:-218.685,-17.7749,0	1/1:78:0,78:0:0:78:2751:-247.831,-23.4803,0	1/1:41:0,41:0:0:41:1453:-131.064,-12.3422,0	1/1:78:0,78:0:0:78:2747:-247.471,-23.4803,0	1/1:67:0,67:0:0:67:2303:-207.528,-20.169,0	1/1:58:0,58:0:0:58:2053:-185.041,-17.4597,0	0/1:118:64,54:64:2296:54:1913:-136.925,0,-171.367	0/1:47:29,17:29:1044:17:612:-41.2062,0,-80.0676	0/1:65:37,28:37:1324:28:991:-69.9366,0,-99.8951	1/1:35:1,34:1:36:34:1173:-102.271,-6.93778,0	0/1:19:12,7:12:432:7:248:-16.9446,0,-33.5016	1/1:34:0,34:0:0:34:1180:-106.502,-10.235,0	0/1:110:84,26:84:3012:26:932:-51.0856,0,-238.197	0/1:280:165,115:165:5915:115:4056:-280.937,0,-448.163	1/1:100:0,100:0:0:100:3559:-320.519,-30.103,0	1/1:79:0,79:0:0:79:2799:-252.149,-23.7814,0	0/1:29:22,7:22:792:7:248:-13.9343,0,-62.8758	1/1:48:0,48:0:0:48:1712:-154.366,-14.4494,0	1/1:134:0,134:0:0:134:4748:-427.48,-40.338,0	1/1:193:0,193:0:0:193:6822:-613.863,-58.0988,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:121:0,121:0:0:121:4300:-387.178,-36.4246,0	1/1:145:0,145:0:0:145:5142:-462.915,-43.6494,0	0/1:172:94,78:94:3372:78:2765:-197.314,0,-251.918	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	1/1:40:0,40:0:0:40:1421:-128.186,-12.0412,0	1/1:17:0,17:0:0:17:612:-55.4101,-5.11751,0	0/1:25:12,13:12:432:13:468:-34.9339,0,-31.6954	1/1:30:0,30:0:0:30:1041:-93.9974,-9.0309,0	1/1:125:0,125:0:0:125:4403:-396.444,-37.6288,0	1/1:133:0,133:0:0:133:4684:-421.708,-40.037,0	0/1:68:45,23:45:1616:23:810:-52.749,0,-125.26	0/1:13:8,5:8:284:5:176:-12.2716,0,-21.99	1/1:93:0,93:0:0:93:3228:-290.651,-27.9958,0	1/1:31:0,31:0:0:31:1071:-96.6942,-9.33193,0	1/1:161:0,161:0:0:161:5716:-514.517,-48.4658,0	1/1:26:0,26:0:0:26:921:-83.2068,-7.82678,0	0/1:36:23,13:23:824:13:456:-30.5362,0,-63.6462	1/1:49:0,49:0:0:49:1719:-154.992,-14.7505,0	0/1:108:61,47:61:2192:47:1650:-116.273,0,-165.034	1/1:131:5,126:5:180:126:4420:-381.421,-22.8829,0	1/1:66:0,66:0:0:66:2355:-212.208,-19.868,0	1/1:84:1,83:1:36:83:2954:-262.495,-21.6882,0	1/1:50:0,50:0:0:50:1761:-158.773,-15.0515,0	0/1:26:21,5:21:752:5:172:-7.99119,0,-60.1795	1/1:105:0,105:0:0:105:3712:-334.281,-31.6082,0	1/1:54:0,54:0:0:54:1915:-172.627,-16.2556,0	0/1:10:7,3:7:248:3:108:-7.06487,0,-19.6539	0/1:82:53,29:53:1900:29:1031:-68.4182,0,-146.593	1/1:47:1,46:1:36:46:1639:-144.2,-10.5501,0	0/1:23:17,6:17:612:6:212:-12.5011,0,-48.4897	0/1:37:22,15:22:792:15:523:-36.2603,0,-60.4676	1/1:57:0,57:0:0:57:2034:-183.326,-17.1587,0	0/1:86:49,37:49:1760:37:1307:-92.0422,0,-132.795	1/1:7:0,7:0:0:7:240:-21.9347,-2.10721,0	1/1:148:0,148:0:0:148:5223:-470.211,-44.5524,0	0/1:141:89,52:89:3200:52:1855:-124.784,0,-245.777	1/1:38:1,37:1:36:37:1296:-113.34,-7.84087,0	1/1:57:0,57:0:0:57:2035:-183.051,-17.1587,0	0/1:172:107,65:107:3827:65:2285:-154.132,0,-292.849	1/1:206:5,201:5:180:201:7199:-631.407,-45.4601,0	1/1:37:0,37:0:0:37:1320:-119.102,-11.1381,0	1/1:65:0,65:0:0:65:2288:-206.18,-19.567,0	0/1:50:25,25:25:900:25:885:-64.915,0,-66.2695	1/1:18:0,18:0:0:18:627:-56.7529,-5.41854,0	1/1:161:0,161:0:0:161:5660:-509.521,-48.4658,0	0/1:72:38,34:38:1352:34:1199:-86.5406,0,-100.302	1/1:229:0,229:0:0:229:8143:-732.887,-68.9359,0	1/1:115:0,115:0:0:115:4045:-364.24,-34.6185,0	1/1:79:2,77:2:72:77:2741:-240.095,-16.9446,0	1/1:86:3,83:3:108:83:2930:-253.858,-15.8134,0	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	1/1:81:0,81:0:0:81:2900:-261.236,-24.3834,0	0/1:68:45,23:45:1616:23:812:-52.9309,0,-125.26	1/1:147:1,146:1:36:146:5187:-463.371,-40.6531,0	1/1:42:0,42:0:0:42:1477:-133.222,-12.6433,0	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	0/1:26:17,9:17:604:9:320:-21.3156,0,-46.8638	1/1:85:0,85:0:0:85:2956:-266.27,-25.5876,0	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	1/1:49:0,49:0:0:49:1721:-155.173,-14.7505,0	1/1:59:0,59:0:0:59:2093:-188.638,-17.7608,0	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	0/1:161:86,75:86:3076:75:2613:-186.949,0,-228.597	0/1:51:39,12:39:1400:12:432:-23.8687,0,-110.947	1/1:83:0,83:0:0:83:2922:-263.214,-24.9855,0	1/1:55:0,55:0:0:55:1928:-173.793,-16.5567,0
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chr02	21064292	.	A	T	20134.3	PASS	AB=0.496492;ABP=3.2693;AC=31;AF=0.164894;AN=188;AO=1211;CIGAR=1X;DP=8613;DPB=8613;DPRA=0.84244;EPP=2632.66;EPPR=16065.4;GTI=1;LEN=1;MEANALT=1.05128;MQM=59.5656;MQMR=59.5851;NS=94;NUMALT=1;ODDS=8.89464;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=43361;QR=264376;RO=7397;RPL=0;RPP=2632.66;RPPR=16065.4;RPR=1211;RUN=1;SAF=0;SAP=2632.66;SAR=1211;SRF=0;SRP=16065.4;SRR=7397;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.167	0/0:107:107,0:107:3809:0:0:0,-32.2102,-342.941	0/0:120:120,0:120:4289:0:0:0,-36.1236,-386.151	0/0:161:160,1:160:5723:1:36:0,-44.8701,-511.259	0/1:89:45,44:45:1607:44:1580:-115.695,0,-117.891	0/1:78:36,42:36:1292:42:1512:-112.886,0,-93.0953	0/0:116:115,1:115:4115:1:36:0,-31.3212,-366.601	0/0:95:94,1:94:3364:1:36:0,-24.9996,-298.898	0/0:66:66,0:66:2356:0:0:0,-19.868,-212.291	0/0:113:113,0:113:4052:0:0:0,-34.0164,-364.86	0/0:62:62,0:62:2212:0:0:0,-18.6639,-199.333	0/0:43:43,0:43:1525:0:0:0,-12.9443,-137.445	0/0:47:47,0:47:1650:0:0:0,-14.1484,-148.566	0/1:76:40,36:40:1432:36:1283:-92.8943,0,-106.29	0/1:39:22,17:22:788:17:612:-43.6671,0,-59.5046	0/1:35:20,15:20:701:15:540:-38.3912,0,-52.8711	0/0:68:68,0:68:2423:0:0:0,-20.47,-218.08	0/1:44:19,25:19:684:25:896:-67.715,0,-48.645	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6595	0/1:228:116,111:116:4142:111:3971:-288.829,0,-304.159	0/1:115:59,56:59:2112:56:2004:-145.993,0,-155.731	0/0:287:287,0:287:10255:0:0:0,-86.3956,-922.701	0/0:48:48,0:48:1709:0:0:0,-14.4494,-154.091	0/1:109:44,65:44:1575:65:2328:-176.766,0,-109.162	0/0:61:61,0:61:2151:0:0:0,-18.3628,-193.846	0/0:296:296,0:296:10581:0:0:0,-89.1049,-951.618	0/0:150:150,0:150:5352:0:0:0,-45.1545,-481.787	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:302:302,0:302:10767:0:0:0,-90.9111,-967.952	0/0:165:165,0:165:5892:0:0:0,-49.6699,-529.755	0/1:179:82,97:82:2948:97:3467:-258.349,0,-211.545	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:27:27,0:27:955:0:0:0,-8.12781,-86.2648	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.213	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.397	0/0:85:84,0:84:3000:0:0:0,-25.2865,-269.866	0/0:251:251,0:251:8980:0:0:0,-75.5585,-807.813	0/1:75:27,47:27:964:47:1682:-128.934,0,-64.4375	0/1:10:4,6:4:144:6:212:-16.4145,0,-10.3033	0/0:179:178,1:178:6400:1:36:0,-50.2861,-572.464	0/0:36:36,0:36:1292:0:0:0,-10.8371,-115.641	0/0:116:116,0:116:4151:0:0:0,-34.9195,-373.577	0/0:25:25,0:25:883:0:0:0,-7.52575,-79.7851	0/1:26:12,14:12:432:14:504:-37.8666,0,-31.3076	0/0:55:55,0:55:1963:0:0:0,-16.5566,-176.944	0/1:95:44,51:44:1564:51:1832:-136.555,0,-111.946	0/0:130:130,0:130:4645:0:0:0,-39.1339,-417.407	0/0:127:127,0:127:4545:0:0:0,-38.2308,-409.2	0/0:137:137,0:137:4898:0:0:0,-41.2411,-440.963	0/0:195:195,0:195:7004:0:0:0,-58.7008,-629.636	0/1:28:16,12:16:576:12:428:-30.4276,0,-43.7461	0/0:192:191,0:191:6847:0:0:0,-57.4967,-615.783	0/0:61:61,0:61:2165:0:0:0,-18.3628,-195.114	0/1:22:5,17:5:180:17:608:-48.4226,0,-9.9294	0/1:125:60,65:60:2148:65:2332:-172.497,0,-155.941	0/0:19:18,1:18:644:1:32:0,-2.52026,-55.0913	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:34:21,13:21:756:13:464:-31.8625,0,-58.124	0/0:102:102,0:102:3628:0:0:0,-30.7051,-326.679	0/1:111:63,48:63:2264:48:1724:-122.026,0,-170.59	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2004	0/0:162:162,0:162:5808:0:0:0,-48.7669,-522.763	0/1:181:96,85:96:3409:85:3045:-219.588,0,-252.498	0/1:76:66,10:66:2368:10:348:-8.77686,0,-190.467	0/0:98:98,0:98:3469:0:0:0,-29.5009,-312.402	0/1:117:49,68:49:1751:68:2448:-185.347,0,-122.651	0/0:136:136,0:136:4868:0:0:0,-40.9401,-438.268	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6011	0/0:84:84,0:84:2999:0:0:0,-25.2865,-270.064	0/1:88:52,36:52:1856:36:1288:-89.7329,0,-140.827	0/0:30:30,0:30:1053:0:0:0,-9.0309,-95.0758	0/0:156:155,0:155:5544:0:0:0,-46.6596,-497.855	0/1:61:39,22:39:1400:22:780:-51.9497,0,-107.936	0/0:136:135,1:135:4810:1:36:0,-37.3418,-429.215	0/0:179:179,0:179:6427:0:0:0,-53.8844,-578.505	0/0:140:140,0:140:5012:0:0:0,-42.1442,-450.941	0/0:42:41,1:41:1457:1:36:0,-9.05403,-127.611	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6899	0/0:108:108,0:108:3852:0:0:0,-32.5112,-345.781	0/1:126:71,55:71:2544:55:1972:-139.71,0,-191.25	0/0:254:254,0:254:9087:0:0:0,-76.4616,-817.649	0/0:76:76,0:76:2703:0:0:0,-22.8783,-243.505	0/0:40:40,0:40:1431:0:0:0,-12.0412,-128.348	0/1:49:17,32:17:612:32:1148:-88.877,0,-40.6606	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.718	0/1:22:11,11:11:392:11:396:-29.3485,0,-28.9928	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.964	0/0:50:49,1:49:1744:1:21:0,-13.07,-155.236	0/0:50:50,0:50:1771:0:0:0,-15.0515,-159.668	0/1:136:63,73:63:2264:73:2612:-194.305,0,-163.078	0/1:27:9,18:9:324:18:644:-50.1581,0,-21.378	0/0:75:75,0:75:2696:0:0:0,-22.5772,-241.946	0/0:44:44,0:44:1564:0:0:0,-13.2453,-141.047
chr02	21064305	.	T	A	211904	PASS	AB=0.50489;ABP=3.51999;AC=157;AF=0.835106;AN=188;AO=7522;CIGAR=1X;DP=8745;DPB=8745;DPRA=0;EPP=33.3151;EPPR=30.844;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.5364;MQMR=59.6251;NS=94;NUMALT=1;ODDS=3.90198;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=269775;QR=43540;RO=1219;RPL=3923;RPP=33.3151;RPPR=30.844;RPR=3599;RUN=1;SAF=0;SAP=16336.8;SAR=7522;SRF=0;SRP=2650.04;SRR=1219;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:35:0,35:0:0:35:1260:-113.644,-10.5361,0	1/1:106:0,106:0:0:106:3807:-342.76,-31.9092,0	1/1:123:0,123:0:0:123:4398:-395.954,-37.0267,0	1/1:164:0,164:0:0:164:5896:-530.414,-49.3689,0	0/1:89:44,45:44:1576:45:1620:-119.062,0,-115.335	0/1:79:42,37:42:1512:37:1332:-96.3928,0,-112.585	1/1:120:1,119:1:36:119:4265:-380.109,-32.5253,0	1/1:95:1,94:1:36:94:3342:-296.93,-24.9996,0	1/1:67:0,67:0:0:67:2412:-215.763,-20.169,0	1/1:112:0,112:0:0:112:4024:-362.34,-33.7154,0	1/1:65:0,65:0:0:65:2332:-210.128,-19.567,0	1/1:45:0,45:0:0:45:1609:-144.909,-13.5464,0	1/1:46:0,46:0:0:46:1652:-148.907,-13.8474,0	0/1:76:35,41:35:1256:41:1476:-110.249,0,-90.467	0/1:38:17,21:17:597:21:756:-56.9281,0,-42.6108	0/1:37:16,20:16:576:20:720:-53.9273,0,-40.9688	1/1:70:0,70:0:0:70:2508:-225.543,-21.0721,0	0/1:44:25,19:25:900:19:684:-48.645,0,-68.0757	1/1:28:0,28:0:0:28:1008:-91.02,-8.42884,0	0/1:232:116,116:116:4137:116:4172:-305.708,0,-302.519	0/1:119:56,63:56:2012:63:2260:-167.84,0,-145.508	1/1:290:0,289:0:0:289:10361:-930.425,-86.9977,0	1/1:49:0,49:0:0:49:1760:-158.679,-14.7505,0	0/1:112:69,43:69:2465:43:1548:-105.832,0,-188.182	1/1:64:0,64:0:0:64:2296:-206.882,-19.2659,0	1/1:300:0,300:0:0:300:10772:-968.843,-90.309,0	1/1:152:0,152:0:0:152:5456:-491.134,-45.7566,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:303:0,303:0:0:303:10871:-977.77,-91.2121,0	1/1:171:0,171:0:0:171:6138:-551.632,-51.4761,0	0/1:183:97,86:97:3492:86:3092:-223.292,0,-259.391	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:25:0,25:0:0:25:881:-79.6059,-7.52575,0	1/1:12:0,12:0:0:12:432:-39.213,-3.61236,0	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	1/1:18:0,18:0:0:18:648:-58.6355,-5.41854,0	1/1:88:0,88:0:0:88:3164:-284.974,-26.4906,0	1/1:255:0,255:0:0:255:9130:-821.296,-76.7627,0	0/1:75:48,27:48:1728:27:968:-64.8486,0,-133.08	0/1:10:6,4:6:201:4:144:-10.3033,0,-15.4067	1/1:181:1,179:1:36:179:6424:-574.62,-50.947,0	1/1:37:0,37:0:0:37:1332:-119.239,-11.1381,0	1/1:117:0,117:0:0:117:4208:-378.524,-35.2205,0	1/1:25:0,25:0:0:25:898:-81.1393,-7.52575,0	0/1:25:14,11:14:489:11:396:-28.3701,0,-36.8084	1/1:57:0,57:0:0:57:2048:-184.591,-17.1587,0	0/1:97:53,44:53:1908:44:1579:-112.756,0,-142.789	1/1:133:0,133:0:0:133:4764:-428.112,-40.037,0	1/1:130:0,130:0:0:130:4656:-419.188,-39.1339,0	1/1:141:0,141:0:0:141:5060:-455.475,-42.4452,0	1/1:201:0,201:0:0:201:7220:-649.069,-60.507,0	0/1:29:12,17:12:432:17:612:-46.5533,0,-30.489	1/1:194:0,194:0:0:194:6972:-627.217,-58.3998,0	1/1:61:0,61:0:0:61:2196:-197.903,-18.3628,0	0/1:22:17,5:17:608:5:176:-9.56236,0,-48.4247	0/1:126:65,61:65:2321:61:2196:-159.331,0,-171.205	1/1:20:1,19:1:32:19:684:-58.691,-2.82129,0	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:35:12,23:12:387:23:820:-63.5783,0,-24.6022	1/1:105:0,105:0:0:105:3745:-336.749,-31.6082,0	0/1:112:48,64:48:1705:64:2286:-172.263,0,-120.014	1/1:7:0,7:0:0:7:252:-23.0218,-2.10721,0	1/1:161:0,161:0:0:161:5765:-518.894,-48.4658,0	0/1:182:86,96:86:3073:96:3456:-256.423,0,-221.803	0/1:77:10,67:10:360:67:2374:-190.722,0,-9.56499	1/1:99:0,99:0:0:99:3560:-320.561,-29.802,0	0/1:121:69,52:69:2480:52:1853:-130.621,0,-187.021	1/1:142:0,142:0:0:142:5081:-456.309,-42.7463,0	1/1:22:0,22:0:0:22:792:-71.6011,-6.62266,0	1/1:85:0,85:0:0:85:3052:-274.848,-25.5876,0	0/1:90:36,54:36:1284:54:1936:-147.419,0,-88.7707	1/1:31:0,31:0:0:31:1108:-100.028,-9.33193,0	1/1:154:0,154:0:0:154:5510:-495.951,-46.3586,0	0/1:60:20,40:20:705:40:1436:-111.476,0,-45.4916	1/1:142:1,141:1:32:141:5035:-449.277,-39.5469,0	1/1:183:0,182:0:0:182:6552:-589.387,-54.7875,0	1/1:141:0,141:0:0:141:5050:-454.355,-42.4452,0	1/1:43:0,43:0:0:43:1544:-139.021,-12.9443,0	1/1:13:0,13:0:0:13:468:-42.4514,-3.91339,0	1/1:110:0,110:0:0:110:3913:-351.888,-33.1133,0	0/1:126:55,71:55:1980:71:2540:-190.892,0,-140.425	1/1:256:0,256:0:0:256:9147:-823.029,-77.0637,0	1/1:79:0,79:0:0:79:2836:-254.449,-23.7814,0	1/1:41:0,41:0:0:41:1461:-131.046,-12.3422,0	0/1:49:32,17:32:1118:17:608:-40.2992,0,-86.1707	1/1:78:0,78:0:0:78:2804:-252.563,-23.4803,0	0/1:22:11,11:11:396:11:396:-29.3555,0,-29.3485	1/1:57:0,57:0:0:57:2052:-184.922,-17.1587,0	1/1:50:0,50:0:0:50:1796:-161.241,-15.0515,0	1/1:50:0,50:0:0:50:1800:-162.278,-15.0515,0	0/1:136:72,64:72:2554:64:2304:-166.676,0,-189.156	0/1:28:18,10:18:648:10:356:-23.9505,0,-50.2183	1/1:74:0,74:0:0:74:2664:-239.495,-22.2762,0	1/1:44:0,44:0:0:44:1584:-142.847,-13.2453,0
chr02	21064311	.	G	A	164344	PASS	AB=0.498972;ABP=3.03261;AC=157;AF=0.835106;AN=188;AO=7400;CIGAR=1X;DP=8632;DPB=8632;DPRA=0;EPP=15959.2;EPPR=2652.23;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.5916;MQMR=59.6384;NS=94;NUMALT=1;ODDS=4.53443;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=264929;QR=43842;RO=1228;RPL=7387;RPP=15959.2;RPPR=2652.23;RPR=13;RUN=1;SAF=0;SAP=16071.9;SAR=7400;SRF=0;SRP=2669.58;SRR=1228;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:34:0,34:0:0:34:1220:-110.09,-10.235,0	1/1:105:0,105:0:0:105:3762:-338.712,-31.6082,0	1/1:122:0,122:0:0:122:4367:-393.169,-36.7257,0	1/1:163:0,163:0:0:163:5826:-524.119,-49.0679,0	0/1:89:44,45:44:1576:45:1608:-118.163,0,-115.335	0/1:77:42,35:42:1496:35:1233:-88.0846,0,-111.747	1/1:120:1,118:1:36:118:4244:-378.466,-32.5092,0	1/1:92:1,91:1:36:91:3264:-289.996,-24.0965,0	1/1:67:0,67:0:0:67:2370:-213.175,-20.169,0	1/1:111:0,111:0:0:111:3963:-356.859,-33.4143,0	1/1:62:0,62:0:0:62:2228:-200.772,-18.6639,0	1/1:45:0,45:0:0:45:1609:-144.906,-13.5464,0	1/1:46:0,46:0:0:46:1647:-148.262,-13.8474,0	0/1:78:37,41:37:1295:41:1468:-108.927,0,-93.3672	0/1:39:17,22:17:612:22:792:-59.8655,0,-43.6671	0/1:37:16,21:16:576:21:752:-56.8635,0,-41.0276	1/1:67:0,67:0:0:67:2401:-216.111,-20.169,0	0/1:44:25,19:25:887:19:684:-48.645,0,-66.9028	1/1:28:0,28:0:0:28:1004:-90.6595,-8.42884,0	0/1:230:116,114:116:4119:114:4091:-299.022,0,-301.519	0/1:120:57,63:57:2036:63:2264:-167.899,0,-147.366	1/1:287:0,287:0:0:287:10257:-922.968,-86.3956,0	1/1:49:0,49:0:0:49:1764:-159.039,-14.7505,0	0/1:111:67,44:67:2395:44:1571:-108.226,0,-182.377	1/1:61:0,61:0:0:61:2161:-194.747,-18.3628,0	1/1:295:0,294:0:0:294:10522:-946.095,-88.5028,0	1/1:151:0,151:0:0:151:5416:-487.542,-45.4555,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:297:0,297:0:0:297:10635:-956.267,-89.4059,0	1/1:169:2,167:2:72:167:5957:-529.132,-44.0373,0	0/1:178:98,80:98:3524:80:2856:-203.572,0,-263.777	1/1:14:0,14:0:0:14:495:-44.883,-4.21442,0	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	1/1:11:0,11:0:0:11:396:-35.9745,-3.31133,0	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	1/1:18:0,18:0:0:18:648:-58.6355,-5.41854,0	1/1:87:0,87:0:0:87:3110:-280.121,-26.1896,0	1/1:254:0,254:0:0:254:9120:-820.398,-76.4616,0	0/1:76:48,28:48:1699:28:995:-66.9813,0,-130.21	0/1:10:6,4:6:216:4:140:-9.93428,0,-16.7802	1/1:179:1,178:1:32:178:6396:-572.499,-50.6851,0	1/1:37:2,35:2:72:35:1257:-105.892,-4.30139,0	1/1:116:0,116:0:0:116:4151:-373.398,-34.9195,0	1/1:24:0,24:0:0:24:864:-78.0802,-7.22472,0	0/1:26:14,12:14:496:12:421:-30.389,0,-37.1442	1/1:56:0,55:0:0:55:1953:-175.722,-16.5567,0	0/1:95:52,42:52:1847:42:1504:-106.49,0,-137.852	1/1:130:0,130:0:0:130:4644:-417.321,-39.1339,0	1/1:126:0,126:0:0:126:4512:-406.231,-37.9298,0	1/1:140:0,140:0:0:140:4999:-449.545,-42.1442,0	1/1:197:0,197:0:0:197:7059:-634.586,-59.3029,0	0/1:29:12,17:12:428:17:612:-46.5533,0,-30.1266	1/1:191:0,191:0:0:191:6842:-615.703,-57.4967,0	1/1:58:0,58:0:0:58:2088:-188.188,-17.4597,0	0/1:23:18,5:18:636:5:176:-9.26133,0,-50.6396	0/1:124:64,60:64:2287:60:2144:-155.883,0,-168.754	1/1:19:1,18:1:36:18:640:-54.331,-2.1213,0	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:36:13,23:13:468:23:828:-63.9989,0,-31.6226	1/1:104:0,104:0:0:104:3717:-334.702,-31.3071,0	0/1:112:50,62:50:1800:62:2218:-166.145,0,-128.562	1/1:7:0,7:0:0:7:251:-22.9312,-2.10721,0	1/1:158:0,158:0:0:158:5668:-510.169,-47.5627,0	0/1:176:83,93:83:2964:93:3340:-247.823,0,-213.917	0/1:73:10,63:10:360:63:2255:-181.23,0,-10.7691	1/1:96:0,96:0:0:96:3421:-308.093,-28.8989,0	0/1:117:68,49:68:2432:49:1751:-122.651,0,-183.908	1/1:143:0,143:0:0:143:5119:-459.73,-43.0473,0	1/1:22:0,22:0:0:22:792:-71.6011,-6.62266,0	1/1:84:0,84:0:0:84:3016:-271.593,-25.2865,0	0/1:85:34,51:34:1224:51:1832:-139.571,0,-84.8795	1/1:30:0,30:0:0:30:1072:-96.7897,-9.0309,0	1/1:152:0,152:0:0:152:5464:-491.822,-45.7566,0	0/1:59:21,38:21:744:38:1360:-104.94,0,-49.3212	1/1:139:1,138:1:36:138:4911:-437.728,-38.2449,0	1/1:181:0,181:0:0:181:6500:-585.072,-54.4864,0	1/1:138:0,138:0:0:138:4952:-445.718,-41.5421,0	1/1:41:0,41:0:0:41:1456:-131.32,-12.3422,0	1/1:13:0,13:0:0:13:468:-42.4514,-3.91339,0	1/1:109:0,109:0:0:109:3866:-347.495,-32.8123,0	0/1:128:57,71:57:2033:71:2552:-191.371,0,-144.589	1/1:251:1,250:1:36:250:8957:-802.361,-71.9603,0	1/1:78:0,78:0:0:78:2800:-252.23,-23.4803,0	1/1:40:0,40:0:0:40:1440:-129.159,-12.0412,0	0/1:49:32,17:32:1148:17:604:-39.9378,0,-88.877	1/1:77:0,77:0:0:77:2748:-247.527,-23.1793,0	0/1:22:11,11:11:392:11:396:-29.3555,0,-28.9907	1/1:58:0,58:0:0:58:2076:-187.084,-17.4597,0	1/1:48:0,48:0:0:48:1728:-155.752,-14.4494,0	1/1:49:0,49:0:0:49:1760:-158.679,-14.7505,0	0/1:137:74,63:74:2648:63:2268:-163.136,0,-197.202	0/1:30:19,11:19:680:11:396:-26.9472,0,-52.4936	1/1:74:0,74:0:0:74:2649:-238.634,-22.2762,0	1/1:43:0,43:0:0:43:1544:-139.248,-12.9443,0
chr02	21064334	.	T	C	20153.4	PASS	AB=0.493868;ABP=3.80929;AC=31;AF=0.164894;AN=188;AO=1218;CIGAR=1X;DP=8695;DPB=8695;DPRA=0.973486;EPP=2647.86;EPPR=16234.8;GTI=1;LEN=1;MEANALT=1.025;MQM=59.6511;MQMR=59.571;NS=94;NUMALT=1;ODDS=8.12899;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=43611;QR=267577;RO=7475;RPL=1218;RPP=2647.86;RPPR=16234.8;RPR=0;RUN=1;SAF=0;SAP=2647.86;SAR=1218;SRF=0;SRP=16234.8;SRR=7475;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:35:35,0:35:1248:0:0:0,-10.536,-112.59	0/0:109:109,0:109:3878:0:0:0,-32.8123,-349.148	0/0:122:122,0:122:4388:0:0:0,-36.7257,-395.056	0/0:161:161,0:161:5776:0:0:0,-48.4658,-519.935	0/1:86:44,42:44:1576:42:1508:-110.121,0,-116.234	0/1:80:38,42:38:1360:42:1512:-112.284,0,-98.61	0/0:121:120,1:120:4300:1:36:0,-32.8264,-383.401	0/0:96:95,1:95:3389:1:36:0,-25.3006,-301.342	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.031	0/0:113:113,0:113:4030:0:0:0,-34.0164,-362.879	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.488	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.141	0/0:49:49,0:49:1743:0:0:0,-14.7505,-156.737	0/1:77:40,37:40:1436:37:1320:-95.9226,0,-106.349	0/1:39:22,17:22:792:17:612:-43.6671,0,-59.8655	0/1:37:21,16:21:756:16:576:-41.0276,0,-57.2245	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.551	0/1:44:19,25:19:684:25:896:-67.715,0,-48.645	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7816	0/1:233:116,117:116:4168:117:4162:-304.468,0,-305.046	0/1:120:63,57:63:2260:57:2044:-148.086,0,-167.539	0/0:288:288,0:288:10302:0:0:0,-86.6966,-925.634	0/0:48:48,0:48:1713:0:0:0,-14.4494,-154.449	0/1:108:44,64:44:1557:64:2300:-174.735,0,-107.86	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.643	0/0:298:298,0:298:10662:0:0:0,-89.7069,-958.901	0/0:149:149,0:149:5285:0:0:0,-44.8535,-475.763	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:294:292,2:292:10469:2:72:0,-81.668,-934.655	0/0:168:167,1:167:5992:1:36:0,-46.9799,-535.059	0/1:183:87,96:87:3105:96:3452:-255.795,0,-224.511	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.213	0/1:16:7,9:7:248:9:324:-24.6894,0,-17.8477	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4052	0/0:89:89,0:89:3200:0:0:0,-26.7917,-288.212	0/0:257:257,0:257:9205:0:0:0,-77.3647,-828.047	0/1:74:28,46:28:1008:46:1644:-125.895,0,-68.7486	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/0:181:180,1:180:6468:1:36:0,-50.8882,-578.579	0/0:37:36,1:36:1292:1:36:0,-7.53983,-112.352	0/0:116:116,0:116:4176:0:0:0,-34.9195,-375.65	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7195	0/1:24:11,13:11:396:13:468:-35.2326,0,-28.6711	0/0:57:57,0:57:2033:0:0:0,-17.1587,-183.24	0/1:95:43,52:43:1544:52:1853:-138.443,0,-110.147	0/0:133:133,0:133:4730:0:0:0,-40.037,-425.338	0/0:129:129,0:129:4598:0:0:0,-38.8329,-413.968	0/0:141:141,0:141:5026:0:0:0,-42.4452,-452.349	0/0:195:195,0:195:6993:0:0:0,-58.7008,-628.65	0/1:29:17,12:17:608:12:432:-30.489,0,-46.1919	0/0:193:193,0:193:6913:0:0:0,-58.0988,-621.942	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.305	0/1:23:5,18:5:180:18:632:-50.2751,0,-9.62837	0/1:125:58,67:58:2080:67:2378:-176.627,0,-149.837	0/0:18:18,0:18:618:0:0:0,-5.41854,-55.9382	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:36:23,13:23:805:13:468:-31.6226,0,-61.9222	0/0:106:106,0:106:3788:0:0:0,-31.9092,-340.664	0/1:111:63,48:63:2234:48:1728:-122.386,0,-167.802	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.0218	0/0:155:155,0:155:5500:0:0:0,-46.6596,-495.065	0/1:181:96,85:96:3448:85:3045:-219.59,0,-256.022	0/1:76:66,10:66:2372:10:356:-9.50297,0,-190.828	0/0:96:96,0:96:3425:0:0:0,-28.8989,-308.417	0/1:122:52,70:52:1872:70:2497:-188.249,0,-132.031	0/0:143:143,0:143:5140:0:0:0,-43.0473,-461.617	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6011	0/0:85:85,0:85:3056:0:0:0,-25.5875,-275.191	0/1:89:54,35:54:1928:35:1256:-86.5536,0,-147	0/0:31:31,0:31:1086:0:0:0,-9.33193,-98.0423	0/0:154:154,0:154:5502:0:0:0,-46.3586,-494.449	0/1:61:40,21:40:1440:21:748:-49.0801,0,-111.535	0/0:143:142,1:142:5069:1:36:0,-39.449,-451.925	0/0:180:180,0:180:6434:0:0:0,-54.1854,-579.135	0/0:141:141,0:141:5048:0:0:0,-42.4452,-454.153	0/0:43:43,0:43:1529:0:0:0,-12.9443,-137.677	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0893	0/0:107:106,1:106:3812:1:36:0,-28.617,-338.596	0/1:126:71,54:71:2556:54:1944:-137.175,0,-192.314	0/0:259:258,0:258:9230:0:0:0,-77.6657,-830.112	0/0:78:78,0:78:2804:0:0:0,-23.4803,-252.59	0/0:40:40,0:40:1436:0:0:0,-12.0412,-128.799	0/1:49:17,32:17:612:32:1152:-89.2373,0,-40.6606	0/0:77:77,0:77:2768:0:0:0,-23.1793,-249.316	0/1:21:10,11:10:360:11:392:-29.2918,0,-26.4227	0/0:57:57,0:57:2052:0:0:0,-17.1587,-184.922	0/0:49:49,0:49:1749:0:0:0,-14.7505,-157.639	0/0:50:49,1:49:1760:1:36:0,-11.4583,-155.091	0/1:135:64,71:64:2300:71:2544:-188.562,0,-166.617	0/1:29:11,18:11:396:18:648:-49.9173,0,-27.2482	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.215	0/0:44:44,0:44:1569:0:0:0,-13.2453,-141.495
chr02	21886786	.	G	T	119950	PASS	AB=0.552764;ABP=300.45;AC=95;AF=0.505319;AN=188;AO=6814;CIGAR=1X;DP=12316;DPB=12316;DPRA=0;EPP=14799.4;EPPR=11941.8;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.9837;MQMR=59.9993;NS=94;NUMALT=1;ODDS=100.262;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243907;QR=196637;RO=5498;RPL=6814;RPP=14799.4;RPPR=11941.8;RPR=0;RUN=1;SAF=0;SAP=14799.4;SAR=6814;SRF=0;SRP=11941.8;SRR=5498;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:18,26:18:648:26:936:-71.3141,0,-45.4066	0/1:197:89,108:89:3180:108:3869:-289.1,0,-227.122	0/1:237:77,160:77:2749:160:5680:-439.973,0,-176.307	0/1:274:128,146:128:4592:146:5213:-386.826,0,-330.961	0/1:120:46,74:46:1633:74:2664:-203.881,0,-111.133	0/1:95:38,57:38:1360:57:2052:-156.353,0,-94.1027	0/1:140:68,72:68:2432:72:2584:-190.665,0,-176.991	0/1:208:108,100:108:3855:100:3566:-258.531,0,-284.532	0/1:124:65,59:65:2336:59:2104:-152.302,0,-173.172	0/1:113:67,46:67:2392:46:1652:-114.952,0,-181.521	0/1:50:25,25:25:887:25:900:-66.2695,0,-65.0966	0/1:96:56,40:56:2008:40:1432:-100.279,0,-152.094	0/1:77:40,37:40:1440:37:1332:-97.0031,0,-106.718	0/1:58:33,25:33:1184:25:900:-63.8613,0,-89.4086	0/1:85:42,43:42:1512:43:1548:-114.026,0,-110.787	0/1:52:27,25:27:972:25:896:-65.3068,0,-72.1443	0/1:75:42,33:42:1487:33:1182:-84.1061,0,-111.547	0/1:65:43,22:43:1544:22:792:-52.0387,0,-119.686	0/1:38:24,14:24:856:14:493:-33.2625,0,-65.922	0/1:545:209,335:209:7469:335:11935:-910.035,0,-508.283	0/1:213:99,114:99:3541:114:4100:-305.064,0,-254.778	0/1:183:58,125:58:2076:125:4466:-347.02,0,-132.022	0/1:124:53,71:53:1900:71:2537:-190.982,0,-133.95	0/1:110:46,64:46:1648:64:2259:-170.455,0,-115.495	0/1:95:35,60:35:1228:60:2156:-165.709,0,-82.2232	0/1:470:246,224:246:8808:224:7997:-578.265,0,-651.223	0/1:241:95,146:95:3381:146:5221:-397.479,0,-231.957	0/1:53:30,23:30:1080:23:828:-58.8895,0,-81.5587	0/1:327:109,217:109:3904:217:7781:-601.551,0,-253.058	0/1:135:63,72:63:2264:72:2567:-190.639,0,-163.383	0/1:201:71,130:71:2517:130:4658:-358.875,0,-166.274	0/1:20:13,7:13:468:7:252:-17.0084,0,-36.439	0/1:19:7,12:7:248:12:417:-32.1406,0,-16.9446	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	0/1:15:5,10:5:180:10:352:-27.5027,0,-12.0366	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:271:131,140:131:4694:140:5032:-371.445,0,-341.039	0/1:303:117,185:117:4176:185:6613:-503.977,0,-284.753	0/1:53:29,24:29:1031:24:860:-61.7672,0,-77.148	0/1:10:4,6:4:144:6:212:-16.4145,0,-10.3033	0/1:220:94,126:94:3345:126:4488:-337.861,0,-235.04	0/1:49:25,24:25:900:24:860:-62.9714,0,-66.5705	0/1:162:85,77:85:3033:77:2772:-200.953,0,-224.432	0/1:97:48,49:48:1728:49:1764:-129.844,0,-126.605	0/1:93:55,38:55:1967:38:1368:-95.425,0,-149.309	0/1:74:28,46:28:1004:46:1656:-127.052,0,-68.3996	0/1:177:50,127:50:1767:127:4547:-356.112,0,-106.03	0/1:385:127,258:127:4537:258:9227:-714.499,0,-292.6	0/1:166:57,109:57:2033:109:3889:-300.233,0,-133.269	0/1:210:92,118:92:3296:118:4244:-318.921,0,-233.643	0/1:189:97,92:97:3457:92:3308:-241.043,0,-254.447	0/1:20:3,17:3:108:17:608:-49.0314,0,-4.05457	0/1:217:82,135:82:2940:135:4852:-371.508,0,-199.51	0/1:50:22,28:22:788:28:1008:-75.9849,0,-56.1933	0/1:8:3,5:3:104:5:180:-14.1438,0,-7.29457	0/1:170:57,113:57:2036:113:4045:-313.061,0,-132.337	0/1:48:32,15:32:1152:15:536:-34.0667,0,-89.4819	1/1:16:1,15:1:36:15:540:-45.3383,-1.21821,0	0/1:45:25,20:25:900:20:711:-50.7693,0,-67.7747	0/1:44:24,20:24:856:20:716:-51.5224,0,-64.1158	0/1:177:94,83:94:3380:83:2988:-215.869,0,-251.132	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/1:328:166,162:166:5944:162:5822:-425.352,0,-436.33	0/1:230:98,132:98:3504:132:4744:-357.879,0,-246.334	0/1:72:45,27:45:1593:27:968:-65.7632,0,-121.984	0/1:141:48,93:48:1709:93:3302:-254.952,0,-111.649	0/1:229:76,153:76:2716:153:5481:-424.479,0,-175.748	0/1:191:66,125:66:2349:125:4441:-342.337,0,-154.171	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/1:82:42,40:42:1508:40:1423:-103.681,0,-111.33	0/1:155:104,51:104:3711:51:1836:-118.861,0,-287.533	0/1:24:4,20:4:144:20:720:-57.9041,0,-6.0889	0/1:81:30,51:30:1064:51:1828:-140.418,0,-71.6882	0/1:79:36,43:36:1292:43:1544:-115.472,0,-92.8024	0/1:148:77,71:77:2752:71:2522:-182.668,0,-203.37	0/1:195:89,106:89:3180:106:3762:-280.076,0,-227.724	0/1:215:76,139:76:2732:139:4992:-384.705,0,-181.401	0/1:143:70,73:70:2512:73:2601:-191.29,0,-183.285	0/1:15:8,7:8:288:7:252:-18.5135,0,-21.752	0/1:168:66,102:66:2356:102:3664:-279.39,0,-161.726	0/1:150:42,108:42:1508:108:3888:-304.958,0,-90.8601	0/1:230:91,139:91:3264:139:4977:-378.839,0,-224.743	0/1:194:108,86:108:3880:86:3061:-217.319,0,-290.993	0/1:58:32,26:32:1152:26:936:-67.0997,0,-86.5304	0/1:101:66,35:66:2359:35:1260:-83.3015,0,-182.164	0/1:166:93,73:93:3320:73:2628:-186.796,0,-249.045	0/1:81:43,38:43:1548:38:1364:-98.6773,0,-115.23	0/1:95:56,39:56:2004:39:1400:-97.7013,0,-152.036	0/1:93:58,35:58:2088:35:1260:-85.7097,0,-160.194	0/1:26:14,12:14:491:12:417:-30.0334,0,-36.6943	0/1:88:45,43:45:1608:43:1548:-113.122,0,-118.519	0/1:94:47,47:47:1692:47:1684:-123.55,0,-124.27	0/1:138:67,71:67:2396:71:2537:-187.037,0,-174.355	0/1:110:61,49:61:2170:49:1764:-125.93,0,-162.452
chr02	21886798	.	A	T	145415	PASS	AB=0.401387;ABP=1635.59;AC=94;AF=0.5;AN=188;AO=7758;CIGAR=1X;DP=19328;DPB=19328;DPRA=0;EPP=16849.3;EPPR=25126.9;GTI=0;LEN=1;MEANALT=1;MQM=59.9884;MQMR=59.9918;NS=94;NUMALT=1;ODDS=86.5878;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=277679;QR=413952;RO=11570;RPL=6746;RPP=9205.81;RPPR=98.6895;RPR=1012;RUN=1;SAF=1012;SAP=9205.81;SAR=6746;SRF=6142;SRP=98.6895;SRR=5428;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:41,24:41:1464:24:860:-58.1549,0,-112.489	0/1:309:203,106:203:7273:106:3796:-248.82,0,-561.601	0/1:289:131,158:131:4700:158:5661:-422.609,0,-336.161	0/1:407:265,142:265:9492:142:5080:-334.825,0,-731.719	0/1:218:116,102:116:4164:102:3639:-262.091,0,-309.317	0/1:184:101,83:101:3632:83:2972:-212.323,0,-271.672	0/1:254:181,73:181:6488:73:2612:-158.866,0,-507.542	0/1:302:204,98:204:7312:98:3493:-223.669,0,-567.218	0/1:196:137,59:137:4876:59:2112:-131.347,0,-379.994	0/1:168:120,48:120:4300:48:1728:-105.232,0,-336.603	0/1:89:63,26:63:2260:26:936:-57.7678,0,-176.871	0/1:162:119,43:119:4272:43:1544:-90.4862,0,-335.89	0/1:146:107,39:107:3833:39:1404:-82.7089,0,-301.214	0/1:130:78,52:78:2784:52:1868:-129.265,0,-211.041	0/1:200:124,76:124:4456:76:2728:-185.557,0,-341.003	0/1:134:87,47:87:3105:47:1692:-112.229,0,-239.338	0/1:135:102,33:102:3617:33:1180:-65.8644,0,-285.095	0/1:144:94,50:94:3384:50:1800:-118.934,0,-261.426	0/1:83:68,15:68:2436:15:540:-23.951,0,-194.51	0/1:645:283,362:283:10144:362:12892:-965.933,0,-718.725	0/1:437:239,198:239:8552:198:7073:-505.08,0,-638.129	0/1:202:80,122:80:2856:122:4342:-330.146,0,-196.47	0/1:192:121,71:121:4332:71:2525:-169.703,0,-332.258	0/1:249:133,116:133:4726:116:4144:-298.188,0,-350.543	0/1:151:94,57:94:3341:57:2014:-136.074,0,-255.452	0/1:638:419,219:419:14918:219:7853:-514.737,0,-1150.29	0/1:351:207,144:207:7378:144:5160:-358.879,0,-558.407	0/1:99:76,23:76:2713:23:828:-45.0421,0,-214.61	0/1:462:244,218:244:8752:218:7794:-561.711,0,-647.965	0/1:186:113,73:113:4018:73:2608:-178.977,0,-305.816	0/1:315:142,173:142:5072:173:6193:-462.643,0,-361.801	0/1:35:27,8:27:957:8:288:-15.7314,0,-75.9078	0/1:26:14,12:14:500:12:432:-31.3944,0,-37.5094	0/1:21:12,9:12:432:9:324:-23.1842,0,-32.8996	0/1:24:14,10:14:496:10:356:-25.1565,0,-37.7495	0/1:13:9,4:9:324:4:144:-9.40023,0,-25.5925	0/1:495:349,146:349:12481:146:5240:-322.726,0,-974.113	0/1:349:166,183:166:5944:183:6541:-483.713,0,-430.008	0/1:147:100,47:100:3588:47:1679:-107.145,0,-278.875	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	0/1:316:190,126:190:6808:126:4512:-311.122,0,-517.665	0/1:79:53,26:53:1900:26:936:-60.7781,0,-147.497	0/1:229:156,73:156:5588:73:2616:-166.752,0,-434.107	0/1:193:140,53:140:4997:53:1908:-113.899,0,-391.779	0/1:222:138,84:138:4956:84:3012:-204.482,0,-379.357	0/1:142:97,45:97:3472:45:1608:-102.264,0,-269.946	0/1:317:142,175:142:5065:175:6265:-468.515,0,-360.569	0/1:465:211,254:211:7541:254:9101:-679.083,0,-538.749	0/1:195:87,108:87:3120:108:3868:-289.614,0,-222.325	0/1:275:154,121:154:5516:121:4329:-307.001,0,-413.782	0/1:278:186,92:186:6657:92:3300:-213.532,0,-515.52	0/1:27:8,19:8:288:19:684:-53.7625,0,-18.1396	0/1:299:166,133:166:5937:133:4776:-339.987,0,-444.429	0/1:75:48,27:48:1705:27:968:-64.8601,0,-131.157	0/1:20:12,8:12:413:8:288:-20.2468,0,-31.4772	0/1:247:111,136:111:3972:136:4877:-364.725,0,-283.317	0/1:85:69,16:69:2480:16:576:-26.5874,0,-197.866	0/1:27:11,16:11:396:16:568:-43.3241,0,-27.8549	0/1:60:39,21:39:1392:21:752:-49.9445,0,-107.517	0/1:97:76,21:76:2724:21:752:-38.8063,0,-216.203	0/1:319:198,121:198:7104:121:4348:-295.465,0,-543.388	0/1:13:10,3:10:356:3:100:-5.41705,0,-28.4679	0/1:401:239,162:239:8519:162:5816:-402.838,0,-645.996	0/1:352:181,171:181:6462:171:6124:-445.297,0,-475.702	0/1:110:80,30:80:2860:30:1038:-60.6118,0,-224.524	0/1:180:88,92:88:3145:92:3288:-241.955,0,-229.089	0/1:389:179,210:179:6412:210:7516:-559.381,0,-460.067	0/1:255:130,125:130:4656:125:4447:-323.612,0,-342.439	0/1:30:20,10:20:720:10:360:-23.7134,0,-56.0979	0/1:135:95,40:95:3412:40:1421:-87.5382,0,-266.654	0/1:292:188,104:188:6740:104:3698:-245.12,0,-518.772	0/1:34:15,19:15:536:19:684:-51.6553,0,-38.3374	0/1:109:56,53:56:2012:53:1908:-139.185,0,-148.541	0/1:181:108,73:108:3872:73:2609:-180.57,0,-294.188	0/1:271:200,71:200:7149:71:2552:-148.343,0,-561.888	0/1:264:160,104:160:5708:104:3736:-256.967,0,-434.368	0/1:297:160,137:160:5744:137:4903:-352.015,0,-427.668	0/1:227:153,74:153:5469:74:2656:-170.952,0,-424.003	0/1:19:12,7:12:432:7:248:-16.9446,0,-33.5016	0/1:236:132,104:132:4752:104:3740:-265.756,0,-356.792	0/1:249:110,139:110:3903:139:4961:-371.683,0,-276.505	0/1:332:195,137:195:6992:137:4909:-342.017,0,-529.4	0/1:290:201,89:201:7176:89:3200:-200.923,0,-558.597	0/1:115:87,28:87:3124:28:1008:-56.4179,0,-246.767	0/1:243:145,98:145:5185:98:3508:-242.78,0,-393.638	0/1:313:239,74:239:8544:74:2626:-142.362,0,-674.733	0/1:152:96,56:96:3448:56:2012:-135.597,0,-264.775	0/1:160:118,42:118:4228:42:1504:-87.4898,0,-332.535	0/1:157:119,38:119:4276:38:1364:-75.799,0,-337.755	0/1:46:33,13:33:1180:13:464:-28.2501,0,-92.6607	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chr02	21886861	.	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chr02	21886870	.	C	T	9569.9	PASS	AB=0.242225;ABP=2545.4;AC=27;AF=0.143617;AN=188;AO=1101;CIGAR=1X;DP=16045;DPB=16045;DPRA=0.878472;EPP=2385.12;EPPR=32178.2;GTI=5;LEN=1;MEANALT=1.05;MQM=59.8819;MQMR=59.9861;NS=94;NUMALT=1;ODDS=2.58521;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=39393;QR=532756;RO=14937;RPL=1101;RPP=2393.8;RPPR=32178.2;RPR=0;RUN=1;SAF=1;SAP=2385.12;SAR=1100;SRF=0;SRP=32438.3;SRR=14937;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:104:104,0:104:3688:0:0:0,-31.3071,-332.123	0/0:184:184,0:184:6552:0:0:0,-55.3895,-589.764	0/0:240:239,0:239:8542:0:0:0,-71.9462,-768.402	0/0:328:328,0:328:11695:0:0:0,-98.7378,-1052.42	0/1:106:84,22:84:3005:22:788:-39.2492,0,-238.77	0/1:96:70,26:70:2478:26:917:-53.9457,0,-194.375	0/0:263:263,0:263:9393:0:0:0,-79.1709,-845.065	0/0:251:250,1:250:8896:1:36:0,-71.9603,-797.028	0/0:242:242,0:242:8637:0:0:0,-72.8493,-777.326	0/0:126:126,0:126:4508:0:0:0,-37.9298,-405.889	0/0:215:214,1:214:7651:1:36:0,-61.1232,-685.028	0/0:208:208,0:208:7410:0:0:0,-62.6142,-666.95	0/0:139:138,1:138:4939:1:36:0,-38.2449,-441.053	0/1:210:159,51:159:5683:51:1832:-101.944,0,-448.373	0/1:116:88,28:88:3139:28:1008:-56.1169,0,-247.816	0/1:160:130,30:130:4659:30:1080:-49.3485,0,-371.306	0/0:135:134,1:134:4795:1:36:0,-37.0408,-428.107	0/1:109:91,18:91:3268:18:637:-24.7745,0,-261.527	0/0:121:121,0:121:4336:0:0:0,-36.4246,-390.415	0/1:268:214,54:214:7647:54:1932:-93.4805,0,-607.591	0/1:314:227,87:227:8100:87:3128:-187.222,0,-634.495	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.763	0/0:192:192,0:192:6855:0:0:0,-57.7978,-617.021	0/0:213:198,14:198:7037:14:504:0,-18.4801,-587.696	0/0:130:130,0:130:4647:0:0:0,-39.1339,-418.392	0/0:379:379,0:379:13539:0:0:0,-114.09,-1218.3	0/0:384:384,0:384:13706:0:0:0,-115.596,-1233.32	0/0:57:57,0:57:2028:0:0:0,-17.1587,-182.793	0/0:391:391,0:391:13985:0:0:0,-117.703,-1258.42	0/0:162:162,0:162:5789:0:0:0,-48.7669,-521.124	0/1:226:184,42:184:6572:42:1503:-67.5317,0,-523.531	0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0591	0/0:57:57,0:57:2031:0:0:0,-17.1587,-183.062	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:40:28,12:28:995:12:432:-27.1718,0,-77.8228	0/0:34:34,0:34:1199:0:0:0,-10.235,-108.21	0/0:345:345,0:345:12313:0:0:0,-103.855,-1108.01	0/0:159:159,0:159:5652:0:0:0,-47.8638,-508.803	0/1:187:151,36:151:5388:36:1296:-60.6513,0,-428.758	0/1:13:9,4:9:320:4:144:-9.40023,0,-25.229	0/0:191:191,0:191:6795:0:0:0,-57.4967,-611.624	0/0:98:98,0:98:3524:0:0:0,-29.5009,-317.368	0/0:269:269,0:269:9588:0:0:0,-80.9771,-861.86	0/0:129:129,0:129:4590:0:0:0,-38.8329,-413.266	0/1:117:89,28:89:3162:28:999:-55.004,0,-249.585	0/0:116:116,0:116:4124:0:0:0,-34.9195,-371.078	0/1:159:109,50:109:3891:50:1785:-112.129,0,-302.521	0/0:210:209,0:209:7462:0:0:0,-62.9153,-671.266	0/0:150:150,0:150:5335:0:0:0,-45.1545,-480.284	0/0:273:273,0:273:9731:0:0:0,-82.1812,-875.742	0/0:261:261,0:261:9296:0:0:0,-78.5688,-836.609	0/1:24:18,6:18:648:6:210:-12.0173,0,-51.4272	0/0:211:211,0:211:7533:0:0:0,-63.5173,-677.956	0/0:129:129,0:129:4605:0:0:0,-38.8329,-414.613	0/0:27:25,2:25:900:2:72:0,-1.29109,-74.4843	0/1:270:208,62:208:7415:62:2224:-119.146,0,-586.117	0/0:91:89,2:89:3157:2:72:0,-20.557,-277.519	0/1:22:14,8:14:495:8:281:-19.0073,0,-38.2604	0/1:32:19,13:19:676:13:453:-31.4667,0,-51.535	0/0:197:196,1:196:7016:1:36:0,-55.7046,-627.905	0/1:251:191,60:191:6822:60:2152:-118.389,0,-538.493	0/0:10:10,0:10:347:0:0:0,-3.0103,-31.5636	0/0:181:181,0:181:6460:0:0:0,-54.4864,-581.486	0/1:351:256,94:256:9117:94:3369:-197.702,0,-714.772	0/0:124:122,2:122:4355:2:72:0,-30.491,-385.289	0/0:197:197,0:197:6973:0:0:0,-59.3029,-627.638	0/1:245:179,66:179:6366:66:2338:-136.923,0,-499.275	0/0:214:214,0:214:7597:0:0:0,-64.4204,-683.773	0/0:128:128,0:128:4579:0:0:0,-38.5318,-412.273	0/0:123:123,0:123:4357:0:0:0,-37.0267,-392.305	0/1:184:148,36:148:5249:36:1288:-60.8341,0,-417.159	0/0:51:50,1:50:1752:1:36:0,-11.7543,-154.363	0/0:109:109,0:109:3882:0:0:0,-32.8123,-349.575	0/1:116:85,31:85:3006:31:1112:-65.4719,0,-235.842	0/0:423:423,0:423:15045:0:0:0,-127.336,-1353.65	0/0:179:178,1:178:6344:1:36:0,-50.2861,-567.454	0/0:170:170,0:170:6065:0:0:0,-51.1751,-545.954	0/0:222:222,0:222:7935:0:0:0,-66.8287,-714.175	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:150:150,0:150:5344:0:0:0,-45.1545,-481.094	0/1:170:128,42:128:4564:42:1500:-84.1189,0,-359.753	0/0:396:394,0:394:14064:0:0:0,-118.606,-1265.17	0/0:180:180,0:180:6440:0:0:0,-54.1854,-579.687	0/0:137:137,0:137:4891:0:0:0,-41.2411,-440.343	0/1:111:86,25:86:3076:25:900:-47.8004,0,-243.654	0/0:234:234,0:234:8344:0:0:0,-70.441,-750.969	0/0:76:70,6:70:2508:6:216:0,-3.08777,-206.182	0/0:156:155,0:155:5551:0:0:0,-46.6596,-499.473	0/0:144:144,0:144:5145:0:0:0,-43.3483,-463.19	0/0:165:165,0:165:5912:0:0:0,-49.6699,-532.188	0/1:360:280,80:280:9991:80:2849:-148.275,0,-790.632	0/1:148:92,56:92:3253:56:2012:-136.798,0,-248.44	0/0:111:111,0:111:3952:0:0:0,-33.4143,-355.871	0/0:222:221,1:221:7894:1:36:0,-63.2304,-706.889
chr02	21886876	.	C	T	9291.46	PASS	AB=0.240584;ABP=2563.84;AC=27;AF=0.143617;AN=188;AO=1087;CIGAR=1X;DP=15962;DPB=15962;DPRA=0.922198;EPP=2363.4;EPPR=32236.4;GTI=5;LEN=1;MEANALT=1.07692;MQM=59.9411;MQMR=59.9857;NS=94;NUMALT=1;ODDS=5.2656;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38873;QR=529849;RO=14868;RPL=1087;RPP=2363.4;RPPR=32236.4;RPR=0;RUN=1;SAF=0;SAP=2363.4;SAR=1087;SRF=0;SRP=32288.5;SRR=14868;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:106:106,0:106:3776:0:0:0,-31.9092,-340.041	0/0:181:181,0:181:6455:0:0:0,-54.4864,-581.036	0/0:239:239,0:239:8505:0:0:0,-71.9462,-765.438	0/0:329:329,0:329:11756:0:0:0,-99.0389,-1057.91	0/1:108:87,21:87:3085:21:756:-35.7695,0,-245.367	0/1:99:74,25:74:2625:25:900:-51.519,0,-206.695	0/0:255:255,0:255:9050:0:0:0,-76.7626,-814.213	0/0:246:245,1:245:8711:1:36:0,-70.4551,-780.386	0/0:239:239,0:239:8521:0:0:0,-71.9462,-766.893	0/0:125:125,0:125:4472:0:0:0,-37.6287,-402.65	0/0:222:222,0:222:7889:0:0:0,-66.8287,-710.042	0/0:203:203,0:203:7229:0:0:0,-61.1091,-650.667	0/0:136:135,1:135:4832:1:36:0,-37.3418,-431.428	0/1:206:155,51:155:5528:51:1832:-103.149,0,-435.633	0/1:115:87,28:87:3116:28:1000:-55.6969,0,-246.048	0/1:162:131,31:131:4676:31:1116:-51.9848,0,-372.233	0/0:136:136,0:136:4813:0:0:0,-40.9401,-433.33	0/1:111:93,18:93:3319:18:641:-24.5338,0,-265.514	0/0:121:121,0:121:4335:0:0:0,-36.4246,-390.324	0/1:266:213,53:213:7610:53:1908:-91.9236,0,-604.862	0/1:307:222,85:222:7880:85:3024:-179.972,0,-616.817	0/0:75:75,0:75:2673:0:0:0,-22.5772,-240.814	0/0:196:194,1:194:6885:1:36:0,-55.4624,-616.124	0/0:211:197,14:197:7046:14:489:0,-19.1784,-589.859	0/0:129:129,0:129:4593:0:0:0,-38.8329,-413.536	0/0:382:382,0:382:13594:0:0:0,-114.993,-1223.25	0/0:380:380,0:380:13530:0:0:0,-114.391,-1217.49	0/0:56:56,0:56:2003:0:0:0,-16.8577,-180.543	0/0:397:396,0:396:14109:0:0:0,-119.208,-1269.22	0/0:169:169,0:169:5986:0:0:0,-50.8741,-538.848	0/1:227:185,42:185:6544:42:1508:-67.6808,0,-520.712	0/0:5:5,0:5:165:0:0:0,-1.50515,-15.1736	0/0:58:58,0:58:2031:0:0:0,-17.4597,-183.057	0/0:21:21,0:21:744:0:0:0,-6.32163,-67.2843	0/1:40:28,12:28:996:12:418:-25.9099,0,-77.9137	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.625	0/0:342:342,0:342:12181:0:0:0,-102.952,-1096.14	0/0:151:151,0:151:5408:0:0:0,-45.4555,-486.85	0/1:187:150,36:150:5335:36:1281:-59.2408,0,-423.936	0/1:13:9,4:9:320:4:144:-9.40023,0,-25.229	0/0:188:188,0:188:6727:0:0:0,-56.5936,-605.505	0/0:97:97,0:97:3484:0:0:0,-29.1999,-313.77	0/0:261:261,0:261:9325:0:0:0,-78.5688,-838.516	0/0:130:130,0:130:4601:0:0:0,-39.1339,-414.258	0/1:123:95,28:95:3389:28:1008:-54.0097,0,-268.198	0/0:121:121,0:121:4297:0:0:0,-36.4246,-386.897	0/1:155:107,48:107:3836:48:1728:-109.146,0,-298.768	0/0:211:211,0:211:7502:0:0:0,-63.5173,-675.223	0/0:145:145,0:145:5131:0:0:0,-43.6493,-461.933	0/0:276:276,0:276:9852:0:0:0,-83.0843,-886.628	0/0:259:259,0:259:9208:0:0:0,-77.9668,-828.692	0/1:24:18,6:18:648:6:210:-12.0173,0,-51.4272	0/0:211:211,0:211:7548:0:0:0,-63.5173,-679.305	0/0:133:132,0:132:4697:0:0:0,-39.736,-422.532	0/0:27:25,2:25:900:2:72:0,-1.29109,-74.4843	0/1:269:207,62:207:7393:62:2224:-119.447,0,-584.44	0/0:92:89,2:89:3161:2:72:0,-20.9168,-277.878	0/1:22:14,8:14:504:8:281:-19.0073,0,-39.0754	0/1:32:19,13:19:680:13:468:-32.8267,0,-51.8962	0/0:201:200,1:200:7117:1:36:0,-56.9088,-636.992	0/1:250:190,60:190:6796:60:2141:-117.7,0,-536.455	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:180:180,0:180:6414:0:0:0,-54.1854,-577.348	0/1:353:262,91:262:9334:91:3261:-187.445,0,-733.744	0/0:125:123,2:123:4385:2:66:0,-31.3608,-388.555	0/0:200:200,0:200:7110:0:0:0,-60.206,-639.959	0/1:244:179,65:179:6342:65:2306:-134.347,0,-497.425	0/0:212:211,0:211:7539:0:0:0,-63.5173,-678.192	0/0:124:124,0:124:4412:0:0:0,-37.3277,-397.248	0/0:121:120,0:120:4281:0:0:0,-36.1236,-385.108	0/1:181:145,36:145:5182:36:1288:-61.7372,0,-412.033	0/0:49:48,1:48:1716:1:36:0,-11.1522,-151.127	0/0:110:110,0:110:3943:0:0:0,-33.1133,-355.061	0/1:112:81,31:81:2908:31:1112:-66.676,0,-228.231	0/0:413:413,0:413:14677:0:0:0,-124.325,-1320.19	0/0:175:174,1:174:6211:1:36:0,-49.082,-555.49	0/0:171:171,0:171:6067:0:0:0,-51.4761,-546.134	0/0:222:222,0:222:7952:0:0:0,-66.8287,-715.703	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:148:148,0:148:5296:0:0:0,-44.5524,-476.775	0/1:174:132,42:132:4728:42:1500:-82.9154,0,-373.299	0/0:398:397,1:397:14209:1:36:0,-116.212,-1274.97	0/0:179:179,0:179:6332:0:0:0,-53.8844,-569.974	0/0:131:131,0:131:4670:0:0:0,-39.4349,-420.462	0/1:106:83,23:83:2956:23:828:-42.9349,0,-234.365	0/0:227:227,0:227:8099:0:0:0,-68.3338,-728.93	0/0:74:68,6:68:2433:6:216:0,-2.48571,-199.433	0/0:153:153,0:153:5464:0:0:0,-46.0576,-491.89	0/0:146:146,0:146:5217:0:0:0,-43.9504,-469.177	0/0:164:164,0:164:5824:0:0:0,-49.3689,-524.276	0/1:358:278,80:278:9892:80:2862:-150.047,0,-782.457	0/1:137:82,55:82:2923:55:1961:-135.52,0,-222.064	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.553	0/0:222:222,0:222:7935:0:0:0,-66.8287,-714.175
chr02	21886931	.	A	G	49476.4	PASS	AB=0.229031;ABP=10191.8;AC=47;AF=0.25;AN=188;AO=3712;CIGAR=1X;DP=32185;DPB=32185;DPRA=1.55193;EPP=8046.15;EPPR=61744.5;GTI=4;LEN=1;MEANALT=1.08219;MQM=59.9881;MQMR=59.9806;NS=94;NUMALT=1;ODDS=10.3828;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=130668;QR=1015459;RO=28465;RPL=1868;RPP=3.34725;RPPR=16.2755;RPR=1844;RUN=1;SAF=1870;SAP=3.46893;SAR=1842;SRF=14030;SRP=15.5231;SRR=14435;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:202:163,39:163:5786:39:1370:-62.789,0,-460.046	0/0:462:462,0:462:16464:0:0:0,-139.076,-1481.43	0/0:501:501,0:501:17854:0:0:0,-150.816,-1606.47	0/1:785:613,172:613:21832:172:6063:-309.467,0,-1728.02	0/1:216:162,54:162:5792:54:1873:-103.82,0,-456.37	0/1:178:142,36:142:5053:36:1276:-61.5575,0,-401.331	0/1:360:281,79:281:10060:79:2811:-144.859,0,-796.94	0/0:588:586,2:586:20892:2:72:0,-170.169,-1872.93	0/1:498:371,127:371:13233:127:4497:-254.989,0,-1040.82	0/1:389:304,85:304:10882:85:3027:-155.559,0,-862.178	0/0:246:245,1:245:8750:1:36:0,-70.4551,-783.892	0/1:372:280,92:280:9975:92:3236:-179.478,0,-785.709	0/0:259:259,0:259:9233:0:0:0,-77.9668,-830.94	0/0:271:269,2:269:9593:2:72:0,-74.7424,-856.121	0/0:255:254,1:254:9107:1:36:0,-73.1644,-815.227	0/1:240:186,54:186:6605:54:1873:-96.5995,0,-522.279	0/0:274:273,1:273:9732:1:36:0,-78.8839,-872.234	0/0:169:169,0:169:6018:0:0:0,-50.8741,-541.727	0/1:161:124,37:124:4425:37:1301:-68.9232,0,-349.955	0/1:629:507,122:507:18097:122:4237:-192.162,0,-1438.98	0/1:671:534,137:534:19015:137:4836:-233.403,0,-1508.93	0/0:200:199,1:199:7107:1:32:0,-57.0067,-636.489	0/0:434:434,0:434:15479:0:0:0,-130.647,-1392.81	0/0:428:418,10:418:14899:10:352:0,-96.8226,-1308.62	0/1:326:237,89:237:8436:89:3113:-182.262,0,-661.11	0/0:930:926,3:926:33037:3:108:0,-269.942,-2962.21	0/1:754:611,143:611:21782:143:5049:-227.579,0,-1732.85	0/1:151:102,49:102:3620:49:1737:-111.157,0,-280.55	0/0:631:630,1:630:22543:1:36:0,-186.352,-2024.68	0/1:406:328,78:328:11716:78:2770:-127.323,0,-932.084	0/0:420:419,0:419:14964:0:0:0,-126.132,-1346.13	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:38:37,1:37:1315:1:32:0,-8.23983,-115.452	0/0:39:39,0:39:1382:0:0:0,-11.7402,-124.677	0/0:48:48,0:48:1698:0:0:0,-14.4494,-153.105	0/1:42:35,7:35:1260:7:252:-10.3857,0,-101.054	0/0:905:904,1:904:32340:1:36:0,-268.834,-2906	0/1:420:339,81:339:12098:81:2877:-132.734,0,-962.192	0/1:239:189,50:189:6742:50:1751:-85.9264,0,-534.91	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/0:470:466,4:466:16605:4:144:0,-128.17,-1480.8	0/0:123:123,0:123:4408:0:0:0,-37.0267,-396.887	0/1:541:429,112:429:15311:112:3922:-190.318,0,-1214.85	0/1:443:317,126:317:11293:126:4430:-265.515,0,-882.899	0/0:281:281,0:281:10033:0:0:0,-84.5894,-902.908	0/1:375:298,77:298:10613:77:2702:-130.538,0,-842.176	0/0:379:376,2:376:13411:2:72:0,-107.286,-1199.96	0/0:514:513,1:513:18355:1:36:0,-151.131,-1647.84	0/1:253:205,48:205:7310:48:1693:-76.4934,0,-581.79	0/1:504:386,118:386:13775:118:4224:-228.619,0,-1087.8	0/1:477:366,111:366:13077:111:3901:-207.698,0,-1033.15	0/1:51:45,6:45:1612:6:197:-2.6988,0,-130.018	0/1:415:311,104:311:11128:104:3708:-208.985,0,-876.483	0/1:202:141,61:141:5022:61:2148:-132.778,0,-391.163	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/0:514:513,1:513:18248:1:36:0,-151.131,-1638.32	0/1:191:136,55:136:4867:55:1942:-117.557,0,-380.686	0/0:36:36,0:36:1281:0:0:0,-10.8371,-115.591	0/1:73:53,20:53:1892:20:716:-42.7925,0,-148.583	0/1:368:290,77:290:10291:77:2715:-133.755,0,-815.283	0/0:405:403,2:403:14387:2:68:0,-115.459,-1288.13	0/1:34:26,8:26:909:8:284:-15.6683,0,-71.888	0/1:365:289,76:289:10299:76:2694:-132.828,0,-816.397	0/0:698:696,2:696:24806:2:72:0,-203.282,-2225.02	0/1:302:232,70:232:8255:70:2488:-133.26,0,-652.054	0/0:297:297,0:297:10597:0:0:0,-89.4059,-953.645	0/1:628:479,149:479:17046:149:5244:-283.053,0,-1344.66	0/0:523:519,3:519:18534:3:108:0,-147.392,-1656.54	0/1:140:106,34:106:3792:34:1174:-63.8156,0,-299.334	0/1:242:189,53:189:6736:53:1864:-95.1842,0,-533.467	0/0:327:327,0:327:11676:0:0:0,-98.4368,-1050.71	0/0:94:94,0:94:3338:0:0:0,-28.2968,-300.638	0/0:350:349,1:349:12460:1:36:0,-101.762,-1117.64	0/0:298:297,1:297:10578:1:36:0,-86.1087,-948.339	0/0:486:482,3:482:17147:3:108:0,-136.172,-1532.84	0/0:494:494,0:494:17638:0:0:0,-148.709,-1587.04	0/1:357:253,104:253:9038:104:3653:-221.505,0,-705.929	0/1:406:306,100:306:10914:100:3540:-196.591,0,-859.942	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:358:356,2:356:12681:2:72:0,-100.932,-1134.28	0/1:285:241,44:241:8604:44:1545:-53.5462,0,-688.555	0/0:613:613,0:613:21894:0:0:0,-184.531,-1969.9	0/0:331:330,0:330:11768:0:0:0,-99.3399,-1058.62	0/0:205:203,2:203:7279:2:72:0,-54.8744,-648.32	0/0:387:385,2:385:13781:2:72:0,-109.662,-1233.23	0/1:596:454,142:454:16170:142:4976:-268.579,0,-1275.41	0/1:172:120,51:120:4288:51:1809:-111.254,0,-334.254	0/1:284:228,56:228:8135:56:1970:-92.0814,0,-646.668	0/1:296:231,65:231:8253:65:2218:-110.773,0,-653.676	0/1:119:79,40:79:2823:40:1385:-89.1223,0,-218.486	0/1:414:321,93:321:11451:93:3202:-163.778,0,-905.837	0/1:404:276,128:276:9842:128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chr02	21886952	.	C	A	330345	PASS	AB=0.454366;ABP=589.048;AC=94;AF=0.5;AN=188;AO=14721;CIGAR=1X;DP=32399;DPB=32399;DPRA=0;EPP=31960.6;EPPR=38294.8;GTI=0;LEN=1;MEANALT=1.08511;MQM=59.9702;MQMR=59.9934;NS=94;NUMALT=1;ODDS=89.6063;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=526232;QR=624446;RO=17670;RPL=7167;RPP=25.1025;RPPR=3.01227;RPR=7554;RUN=1;SAF=7166;SAP=25.3314;SAR=7555;SRF=8828;SRP=3.03439;SRR=8842;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:201:72,129:72:2542:129:4596:-353.289,0,-168.522	0/1:473:218,255:218:7711:255:9104:-676.948,0,-551.641	0/1:515:260,255:260:9143:255:9098:-663.764,0,-667.819	0/1:787:360,427:360:12697:427:15278:-1137.82,0,-905.651	0/1:214:148,66:148:5266:66:2359:-148.147,0,-409.627	0/1:183:128,55:128:4497:55:1967:-122.216,0,-349.814	0/1:362:165,197:165:5845:197:7058:-526.294,0,-417.192	0/1:590:284,306:284:9941:306:10976:-810.125,0,-717.033	0/1:498:237,261:237:8329:261:9330:-689.722,0,-599.712	0/1:396:190,205:190:6722:205:7323:-539.982,0,-485.922	0/1:244:113,131:113:3983:131:4684:-348.266,0,-285.209	0/1:378:181,197:181:6382:197:7040:-519.872,0,-460.681	0/1:257:132,125:132:4624:125:4480:-326.004,0,-338.962	0/1:271:199,72:199:7080:72:2560:-149.069,0,-555.315	0/1:255:199,56:199:7054:56:1993:-102.88,0,-557.385	0/1:241:167,74:167:5898:74:2634:-164.755,0,-458.38	0/1:269:134,135:134:4694:135:4821:-353.067,0,-341.646	0/1:169:126,43:126:4484:43:1535:-87.5683,0,-352.855	0/1:161:85,76:85:3001:76:2723:-196.847,0,-221.857	0/1:636:461,175:461:16318:175:6275:-373.387,0,-1276.84	0/1:683:458,225:458:16192:225:8019:-516.123,0,-1251.14	0/1:203:67,136:67:2393:136:4855:-375.987,0,-154.516	0/1:438:190,248:190:6740:248:8844:-664.094,0,-474.821	0/1:430:330,100:330:11630:100:3579:-192.857,0,-917.135	0/1:328:184,144:184:6556:144:5161:-365.889,0,-491.381	0/1:945:399,546:399:14187:546:19557:-1475.16,0,-992.122	0/1:770:327,443:327:11541:443:15796:-1189.54,0,-806.775	0/1:155:89,66:89:3128:66:2364:-166.359,0,-235.086	0/1:644:276,368:276:9782:368:13178:-991.957,0,-686.469	0/1:406:194,212:194:6918:212:7589:-560.824,0,-500.468	0/1:423:301,122:301:10619:122:4339:-263.349,0,-828.294	0/1:28:11,17:11:373:17:603:-46.1707,0,-25.4664	0/1:39:26,13:26:913:13:464:-30.3573,0,-70.7438	0/1:41:10,31:10:345:31:1112:-88.0491,0,-19.0386	0/1:47:31,16:31:1095:16:568:-37.3035,0,-84.7107	0/1:42:18,24:18:648:24:856:-64.7097,0,-46.0086	0/1:901:424,476:424:14987:476:17041:-1262.04,0,-1077.28	0/1:421:166,255:166:5922:255:9141:-695.82,0,-406.354	0/1:241:187,54:187:6591:54:1917:-100.257,0,-520.728	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	0/1:469:206,263:206:7253:263:9390:-703.88,0,-511.639	0/1:122:64,58:64:2257:58:2072:-150.02,0,-166.666	0/1:547:218,329:218:7746:329:11800:-897.19,0,-532.51	0/1:447:240,207:240:8461:207:7396:-531.123,0,-626.941	0/1:267:202,64:202:7104:64:2281:-125.109,0,-558.99	0/1:369:159,210:159:5586:210:7516:-565.383,0,-391.784	0/1:385:304,81:304:10745:81:2912:-146.418,0,-851.06	0/1:516:242,274:242:8578:274:9776:-724.425,0,-616.689	0/1:259:107,152:107:3750:152:5426:-410.501,0,-259.734	0/1:508:248,260:248:8771:260:9269:-681.253,0,-636.459	0/1:487:242,245:242:8603:245:8768:-642.491,0,-627.664	0/1:54:22,32:22:777:32:1152:-87.7345,0,-53.9947	0/1:415:185,230:185:6590:230:8272:-619.549,0,-468.256	0/1:201:107,94:107:3816:94:3372:-243.118,0,-283.129	0/1:47:32,15:32:1107:15:540:-34.7881,0,-85.7847	0/1:518:371,147:371:13070:147:5211:-313.195,0,-1020.18	0/1:196:100,96:100:3482:96:3428:-249.73,0,-254.589	0/1:40:26,14:26:894:14:504:-33.6569,0,-68.7279	0/1:73:51,22:51:1800:22:788:-49.2696,0,-140.304	0/1:374:174,199:174:6087:199:7096:-526.203,0,-435.442	0/1:405:328,77:328:11596:77:2758:-126.544,0,-921.603	0/1:35:13,22:13:468:22:792:-61.0692,0,-31.9236	0/1:367:168,198:168:5929:198:7111:-528.653,0,-423.185	0/1:689:500,189:500:17724:189:6755:-400.609,0,-1387.37	0/1:306:167,139:167:5851:139:4968:-355.152,0,-434.589	0/1:291:135,156:135:4754:156:5553:-412.292,0,-340.415	0/1:627:483,144:483:17122:144:5104:-270.756,0,-1351.88	0/1:537:215,322:215:7585:322:11497:-871.589,0,-521.036	0/1:143:68,75:68:2408:75:2641:-194.887,0,-173.928	0/1:240:108,132:108:3791:132:4732:-353.791,0,-269.136	0/1:328:248,80:248:8776:80:2849:-157.901,0,-691.098	0/1:98:56,42:56:1947:42:1512:-106.874,0,-146	0/1:342:162,180:162:5681:180:6441:-476.822,0,-408.457	0/1:296:233,63:233:8254:63:2249:-113.567,0,-653.769	0/1:483:267,216:267:9356:216:7705:-548.086,0,-696.619	0/1:504:221,283:221:7890:283:10138:-760.63,0,-558.409	0/1:364:168,196:168:5913:196:7017:-522.016,0,-422.705	0/1:414:214,200:214:7650:200:7161:-519.918,0,-563.91	0/1:24:12,12:12:413:12:432:-31.9965,0,-30.2731	0/1:364:164,200:164:5792:200:7146:-533.622,0,-411.821	0/1:282:191,91:191:6836:91:3264:-209.081,0,-530.42	0/1:620:341,279:341:12022:279:9925:-706.554,0,-895.203	0/1:336:167,169:167:5901:169:6045:-443.006,0,-430.059	0/1:207:111,96:111:3920:96:3435:-247.047,0,-290.682	0/1:388:316,72:316:11108:72:2563:-114.119,0,-882.83	0/1:601:277,324:277:9784:324:11576:-860.791,0,-699.597	0/1:172:139,33:139:4914:33:1175:-54.2716,0,-390.634	0/1:286:128,157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chr02	21886989	.	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chr02	22787871	.	A	G	64061.1	PASS	AB=0.509454;ABP=8.75866;AC=44;AF=0.234043;AN=188;AO=3785;CIGAR=1X;DP=15866;DPB=15866;DPRA=1.12431;EPP=8222.03;EPPR=26230.1;GTI=0;LEN=1;MEANALT=1.03774;MQM=59.7173;MQMR=59.9591;NS=94;NUMALT=1;ODDS=0.939816;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=134927;QR=427315;RO=12078;RPL=0;RPP=8222.03;RPPR=26230.1;RPR=3785;RUN=1;SAF=3785;SAP=8222.03;SAR=0;SRF=12078;SRP=26230.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:42:42,0:42:1484:0:0:0,-12.6433,-133.855	0/0:255:255,0:255:9032:0:0:0,-76.7626,-812.836	0/1:212:124,88:124:4392:88:3136:-218.637,0,-331.634	0/0:395:395,0:395:13934:0:0:0,-118.907,-1253.85	0/1:145:75,70:75:2649:70:2493:-180.953,0,-195.007	0/1:103:55,48:55:1933:48:1697:-122.008,0,-143.239	0/1:333:165,168:165:5785:168:5998:-439.629,0,-419.672	0/0:234:233,0:233:8239:0:0:0,-70.14,-741.171	0/0:265:265,0:265:9399:0:0:0,-79.7729,-845.833	0/0:203:203,0:203:7172:0:0:0,-61.1091,-645.542	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.533	0/1:93:38,55:38:1360:55:1946:-147.199,0,-94.7046	0/0:78:78,0:78:2781:0:0:0,-23.4803,-250.485	0/1:95:25,70:25:892:70:2505:-197.102,0,-52.0018	0/1:86:37,49:37:1316:49:1741:-131.076,0,-92.8532	0/1:65:37,28:37:1308:28:1008:-71.4481,0,-98.4546	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/0:73:73,0:73:2612:0:0:0,-21.9752,-235.328	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/1:696:355,341:355:12634:341:12153:-883.394,0,-927.22	0/0:363:363,0:363:12813:0:0:0,-109.274,-1153	0/0:144:143,1:143:5058:1:36:0,-39.75,-451.754	0/0:167:167,0:167:5911:0:0:0,-50.272,-532.102	0/0:271:271,0:271:9545:0:0:0,-81.5791,-859.019	0/0:211:211,0:211:7478:0:0:0,-63.5173,-673.07	0/0:538:537,1:537:19008:1:36:0,-158.356,-1706.71	0/0:370:370,0:370:13091:0:0:0,-111.381,-1178	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3611	0/1:518:257,261:257:9078:261:9368:-687.114,0,-661.077	0/1:148:85,63:85:3028:63:2233:-156.665,0,-228.199	0/1:254:135,119:135:4761:119:4276:-308.546,0,-352.183	0/0:16:16,0:16:564:0:0:0,-4.81648,-51.0903	0/0:36:36,0:36:1265:0:0:0,-10.8371,-114.149	0/0:14:14,0:14:492:0:0:0,-4.21442,-44.6123	0/0:20:19,1:19:664:1:36:0,-2.42232,-56.4862	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	0/1:227:109,118:109:3888:118:4205:-310.287,0,-281.78	0/1:250:132,118:132:4613:118:4201:-302.98,0,-340.085	0/0:70:70,0:70:2492:0:0:0,-21.0721,-224.534	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:273:273,0:273:9641:0:0:0,-82.1812,-867.653	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/1:329:150,179:150:5294:179:6367:-473.943,0,-377.521	0/1:104:47,57:47:1664:57:2014:-150.198,0,-118.74	0/1:106:53,53:53:1858:53:1892:-138.633,0,-135.587	0/0:276:276,0:276:9758:0:0:0,-83.0843,-878.182	0/1:257:140,117:140:4962:117:4181:-299.076,0,-369.366	0/0:276:273,3:273:9688:3:108:0,-73.0091,-861.808	0/1:190:87,103:87:3081:103:3639:-270.483,0,-220.298	0/0:213:213,0:213:7542:0:0:0,-64.1194,-678.829	0/1:284:136,148:136:4766:148:5300:-391.634,0,-343.611	0/1:11:3,8:3:104:8:288:-22.9561,0,-6.39148	0/0:273:273,0:273:9628:0:0:0,-82.1812,-866.479	0/0:61:59,2:59:2084:2:72:0,-11.5261,-179.974	0/1:16:14,2:14:488:2:72:-2.02024,0,-39.4339	0/1:240:122,117:122:4322:117:4127:-299.251,0,-316.851	0/0:110:110,0:110:3908:0:0:0,-33.1133,-351.916	0/1:11:5,6:5:176:6:216:-16.4792,0,-12.8737	0/1:37:16,21:16:560:21:752:-56.8681,0,-39.5906	0/1:157:77,80:77:2721:80:2857:-210.065,0,-197.757	0/0:117:117,0:117:4180:0:0:0,-35.2205,-376.383	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:259:258,1:258:9084:1:36:0,-74.3685,-813.943	0/1:328:167,161:167:5930:161:5720:-416.144,0,-435.067	0/1:157:80,77:80:2802:77:2749:-200.347,0,-205.158	0/0:154:154,0:154:5407:0:0:0,-46.3586,-486.765	0/1:360:175,185:175:6209:185:6582:-484.018,0,-450.541	0/0:187:185,2:185:6553:2:72:0,-49.4559,-583.023	0/1:31:17,14:17:608:14:504:-36.3662,0,-45.7201	0/1:178:83,95:83:2920:95:3350:-248.05,0,-209.442	0/1:117:46,71:46:1625:71:2536:-193.255,0,-110.46	0/0:26:26,0:26:908:0:0:0,-7.82678,-82.0353	0/0:219:219,0:219:7806:0:0:0,-65.9256,-702.562	0/1:129:72,57:72:2541:57:2044:-145.377,0,-190.107	0/0:447:447,0:447:15807:0:0:0,-134.56,-1422.34	0/0:263:263,0:263:9305:0:0:0,-79.1709,-837.43	0/1:171:86,85:86:3045:85:3025:-220.788,0,-222.804	0/1:147:76,71:76:2681:71:2548:-185.301,0,-197.284	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.274	0/0:226:226,0:226:7926:0:0:0,-68.0328,-713.384	0/1:223:111,112:111:3898:112:4024:-295.214,0,-283.888	0/0:386:384,1:384:13492:1:36:0,-112.658,-1210.38	0/0:113:113,0:113:4024:0:0:0,-34.0164,-362.351	0/0:69:69,0:69:2456:0:0:0,-20.7711,-221.295	0/0:104:104,0:104:3712:0:0:0,-31.3071,-334.282	0/1:211:87,124:87:3113:124:4399:-332.472,0,-216.878	0/1:55:19,36:19:684:36:1283:-99.2155,0,-45.3337	0/1:94:43,51:43:1540:51:1817:-135.495,0,-110.566	0/0:67:67,0:67:2380:0:0:0,-20.169,-214.459	0/1:35:13,22:13:464:22:777:-59.693,0,-31.5615	0/1:66:31,35:31:1093:35:1248:-92.7569,0,-78.8097	0/1:115:37,78:37:1312:78:2792:-216.899,0,-83.7632	0/0:170:170,0:170:6045:0:0:0,-51.1751,-544.157	0/0:124:123,1:123:4365:1:36:0,-33.7294,-389.428
chr02	22787926	.	TCAC	TC	1050.79	PASS	AB=0.241978;ABP=5860.25;AC=45;AF=0.239362;AN=188;AO=2457;CIGAR=1M2D1M;DP=19299;DPB=18070;DPRA=1.34686;EPP=5338.32;EPPR=36498.9;GTI=33;LEN=2;MEANALT=1.21569;MQM=23.6219;MQMR=57.1135;NS=94;NUMALT=1;ODDS=1.61115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=85744;QR=586410;RO=16807;RPL=0;RPP=5338.32;RPPR=27366.4;RPR=2457;RUN=1;SAF=0;SAP=5338.32;SAR=2457;SRF=15680;SRP=27366.4;SRR=1127;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/0:41:40,1:40:1398:1:36:0,-10.2556,-124.031	0/0:242:239,0:239:8426:0:0:0,-71.9462,-758.003	0/1:260:196,64:196:6837:64:2249:-42.0311,0,-535.867	0/0:398:398,0:398:13937:0:0:0,-119.81,-1254.15	0/1:183:145,38:145:5070:38:1343:-21.7166,0,-401.36	0/1:122:97,25:97:3393:25:884:-9.83155,0,-268.865	0/1:447:330,117:330:11447:117:4052:-120.23,0,-895.561	0/0:228:225,0:225:7880:0:0:0,-67.7317,-708.89	0/0:249:248,0:248:8669:0:0:0,-74.6554,-779.918	0/0:205:204,1:204:7106:1:36:0,-59.2442,-635.441	0/0:43:43,0:43:1479:0:0:0,-12.9443,-133.4	0/1:135:90,44:90:3153:44:1537:-41.4048,0,-243.084	0/0:77:77,0:77:2689:0:0:0,-23.1793,-242.212	0/1:147:93,54:93:3236:54:1886:-64.0077,0,-247.211	0/1:115:85,30:85:2994:30:1056:-30.3262,0,-235.069	0/1:93:66,27:66:2319:27:941:-25.4383,0,-180.968	0/0:69:69,0:69:2399:0:0:0,-20.7711,-216.168	0/0:68:67,0:67:2345:0:0:0,-20.169,-210.951	0/0:40:40,0:40:1409:0:0:0,-12.0412,-127.107	0/1:836:689,147:689:23837:147:5146:-68.1411,0,-1892.5	0/0:364:363,0:363:12677:0:0:0,-109.274,-1140.43	0/0:291:290,0:290:10178:0:0:0,-87.2987,-683.543	0/0:170:170,0:170:5954:0:0:0,-51.1751,-534.176	0/0:275:270,0:270:9485:0:0:0,-81.2781,-851.255	0/0:211:211,0:211:7305:0:0:0,-63.5173,-657.529	0/0:826:824,1:824:28897:1:21:0,-246.621,-2146.02	0/0:373:373,0:373:12995:0:0:0,-112.284,-1167.16	0/0:25:25,0:25:874:0:0:0,-7.52575,-78.9757	0/1:819:655,164:655:22875:164:5750:-139.809,0,-1605.62	0/1:208:145,63:145:4986:63:2215:-63.6923,0,-386.274	0/1:338:252,86:252:8745:86:3029:-84.756,0,-685.313	0/0:16:16,0:16:571:0:0:0,-4.81648,-51.7233	0/0:35:34,0:34:1172:0:0:0,-10.235,-105.422	0/0:14:14,0:14:485:0:0:0,-4.21442,-43.9787	0/1:24:20,4:20:704:4:144:-1.25061,0,-56.4601	0/1:25:16,9:16:556:9:324:-9.40653,0,-42.841	0/1:378:294,84:294:10287:84:2923:-84.1437,0,-709.17	0/1:313:247,66:247:8568:66:2336:-38.0771,0,-672.39	0/0:66:66,0:66:2328:0:0:0,-19.868,-209.155	0/1:7:4,3:4:122:3:108:-4.27361,0,-9.17491	0/0:276:275,1:275:9585:1:36:0,-81.291,-860.847	0/0:45:45,0:45:1566:0:0:0,-13.5463,-140.124	0/1:401:318,82:318:11086:82:2847:-43.9165,0,-876.803	0/1:149:104,45:104:3645:45:1546:-53.699,0,-282.254	0/1:152:105,46:105:3647:46:1587:-53.6303,0,-282.795	0/0:373:372,0:372:13114:0:0:0,-111.983,-1023.07	0/1:357:250,107:250:8716:107:3738:-90.6724,0,-676.978	0/0:272:271,1:271:9454:1:36:0,-79.4132,-848.384	0/1:265:185,80:185:6444:80:2783:-92.2704,0,-498.237	0/0:212:212,0:212:7421:0:0:0,-63.8184,-667.957	0/1:489:393,96:393:13750:96:3355:-77.2849,0,-931.457	0/1:17:11,6:11:382:6:199:-7.32674,0,-29.5949	0/0:269:269,0:269:9483:0:0:0,-80.9771,-853.443	0/0:112:111,0:111:3866:0:0:0,-33.4143,-267.018	0/1:32:15,17:15:537:17:577:-22.153,0,-39.0325	0/1:293:234,58:234:8146:58:2004:-28.8777,0,-644.954	0/0:107:107,0:107:3715:0:0:0,-32.2102,-334.557	0/1:19:15,4:15:523:4:140:-4.01761,0,-35.3101	0/1:74:52,21:52:1806:21:720:-26.4633,0,-117.896	0/1:194:153,41:153:5301:41:1464:-23.5717,0,-418.408	0/0:120:119,1:119:4170:1:36:0,-33,-372.367	0/0:11:11,0:11:371:0:0:0,-3.31133,-33.7141	0/0:437:434,0:434:15235:0:0:0,-130.647,-1104.79	0/1:418:328,90:328:11345:90:3171:-71.8569,0,-895.117	0/1:201:160,41:160:5532:41:1424:-21.7722,0,-437.491	0/0:160:160,0:160:5546:0:0:0,-48.1648,-499.277	0/1:474:357,117:357:12326:117:4118:-110.927,0,-965.492	0/0:186:186,0:186:6453:0:0:0,-55.9916,-580.875	0/1:45:30,15:30:1065:15:540:-17.0976,0,-82.6153	0/1:216:173,43:173:6054:43:1523:-16.2017,0,-479.892	0/1:187:152,35:152:5295:35:1224:-25.7265,0,-361.517	0/0:25:25,0:25:870:0:0:0,-7.52575,-78.6152	0/0:199:199,0:199:6970:0:0:0,-59.905,-627.385	0/1:159:125,34:125:4377:34:1186:-15.7928,0,-346.233	0/0:455:454,0:454:15742:0:0:0,-136.668,-1415.08	0/0:268:268,0:268:9368:0:0:0,-80.676,-840.53	0/1:243:166,75:166:5768:75:2625:-66.7678,0,-446.132	0/1:187:137,49:137:4787:49:1698:-34.3374,0,-374.645	0/0:52:52,0:52:1810:0:0:0,-15.6536,-163.18	0/0:229:228,0:228:7888:0:0:0,-68.6348,-709.616	0/1:280:216,64:216:7559:64:2241:-35.7417,0,-596.085	0/0:382:382,0:382:13364:0:0:0,-114.993,-1200.68	0/0:114:114,0:114:3968:0:0:0,-34.3174,-357.321	0/0:69:69,0:69:2434:0:0:0,-20.7711,-219.318	0/0:104:104,0:104:3627:0:0:0,-31.3071,-326.643	0/1:269:210,59:210:7358:59:2050:-47.5291,0,-581.217	0/1:72:53,19:53:1868:19:656:-13.2339,0,-146.722	0/1:132:84,46:84:2954:46:1574:-46.9369,0,-226.63	0/0:63:62,0:62:2177:0:0:0,-18.6639,-195.838	0/1:67:35,32:35:1242:32:1075:-41.956,0,-91.9013	0/1:116:67,49:67:2310:49:1681:-63.2755,0,-172.304	0/1:171:116,55:116:4007:55:1874:-67.1161,0,-309.35	0/0:177:177,0:177:6142:0:0:0,-53.2823,-552.901	0/0:127:127,0:127:4454:0:0:0,-38.2308,-401.039
chr02	23322609	.	T	C	126501	PASS	AB=0.516853;ABP=38.5086;AC=94;AF=0.5;AN=188;AO=7437;CIGAR=1X;DP=14389;DPB=14389;DPRA=0;EPP=16152.3;EPPR=10109.5;GTI=0;LEN=1;MEANALT=1.03191;MQM=51.3514;MQMR=54.1062;NS=94;NUMALT=1;ODDS=119.097;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=266265;QR=248767;RO=6949;RPL=0;RPP=16152.3;RPPR=15092.6;RPR=7437;RUN=1;SAF=7437;SAP=16152.3;SAR=0;SRF=6318;SRP=10109.5;SRR=631;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:94:55,39:55:1972:39:1404:-97.9015,0,-144.488	0/1:63:33,30:33:1176:30:1080:-78.1918,0,-84.8781	0/1:285:114,171:114:4049:171:6117:-457.739,0,-273.519	0/1:264:100,163:100:3576:163:5844:-443.988,0,-238.19	0/1:44:19,25:19:676:25:900:-67.5474,0,-40.9709	0/1:41:14,27:14:500:27:972:-74.2566,0,-30.5761	0/1:65:31,34:31:1108:34:1212:-88.5152,0,-78.9202	0/1:304:113,191:113:4025:191:6794:-517.295,0,-261.324	0/1:203:120,83:120:4316:83:2976:-205.917,0,-322.637	0/1:130:49,81:49:1752:81:2904:-221.575,0,-114.965	0/1:140:79,61:79:2816:61:2168:-153.062,0,-197.986	0/1:263:138,125:138:4943:125:4464:-314.947,0,-341.95	0/1:147:84,63:84:3024:63:2241:-157.039,0,-217.527	0/1:143:85,58:85:3021:58:2084:-144.168,0,-217.166	0/1:125:68,57:68:2444:57:2044:-141.752,0,-176.045	0/1:155:107,48:107:3821:48:1720:-107.461,0,-278.185	0/1:94:69,25:69:2480:25:900:-52.7507,0,-176.965	0/1:59:45,14:45:1616:14:500:-27.3619,0,-119.363	0/1:73:48,25:48:1728:25:896:-58.6305,0,-126.368	0/1:255:111,144:111:3984:144:5168:-378.922,0,-270.211	0/1:293:129,164:129:4620:164:5842:-436.27,0,-323.679	0/1:129:59,70:59:2081:70:2512:-187.265,0,-142.918	0/1:264:78,186:78:2804:186:6660:-519.335,0,-167.405	0/1:94:32,62:32:1144:62:2224:-171.657,0,-72.779	0/1:125:70,55:70:2481:55:1968:-139.367,0,-182.965	0/1:376:155,221:155:5556:221:7931:-597.286,0,-380.093	0/1:386:147,239:147:5268:239:8568:-653.363,0,-349.491	0/1:82:47,35:47:1676:35:1256:-88.4489,0,-117.647	0/1:389:145,244:145:5204:244:8756:-659.284,0,-349.442	0/1:175:57,118:57:2025:118:4206:-324.608,0,-128.705	0/1:177:88,89:88:3160:89:3192:-228.124,0,-228.729	0/1:9:7,2:7:252:2:72:-4.11443,0,-20.3089	0/1:34:10,24:10:356:24:860:-67.2134,0,-21.2062	0/1:9:4,5:4:144:5:180:-13.7765,0,-10.6043	0/1:17:12,5:12:432:5:180:-11.2261,0,-31.7181	0/1:16:5,11:5:180:11:396:-30.7544,0,-11.7356	0/1:390:227,163:227:8148:163:5844:-403.477,0,-600.915	0/1:143:64,79:64:2300:79:2828:-210.856,0,-159.542	0/1:93:54,39:54:1894:39:1396:-97.0412,0,-138.797	0/1:5:2,3:2:72:3:108:-8.4797,0,-5.33157	0/1:183:83,100:83:2980:100:3588:-267.23,0,-212.704	0/1:86:57,29:57:2052:29:1044:-68.1916,0,-150.82	0/1:207:74,133:74:2652:133:4768:-365.424,0,-169.881	0/1:134:80,54:80:2863:54:1928:-130.197,0,-205.231	0/1:138:93,45:93:3328:45:1612:-101.117,0,-240.711	0/1:213:119,94:119:4256:94:3380:-237.613,0,-312.667	0/1:182:69,113:69:2450:113:4044:-301.386,0,-161.993	0/1:318:155,162:155:5552:162:5816:-426.218,0,-400.174	0/1:143:87,56:87:3108:56:2004:-133.138,0,-235.118	0/1:170:68,102:68:2428:102:3656:-277.675,0,-163.764	0/1:150:79,71:79:2832:71:2524:-179.581,0,-207.299	0/1:10:3,7:3:108:7:252:-19.74,0,-6.6816	0/1:173:68,105:68:2429:105:3756:-285.065,0,-164.194	0/1:70:31,39:31:1112:39:1400:-104.947,0,-77.4346	0/1:5:2,3:2:72:3:108:-8.42609,0,-5.33157	0/1:220:91,129:91:3272:129:4608:-346.556,0,-225.338	0/1:72:42,30:42:1504:30:1072:-75.0367,0,-112.42	0/1:14:4,10:4:144:10:360:-27.8937,0,-8.71935	0/1:23:12,11:12:428:11:396:-28.611,0,-31.9351	0/1:130:63,67:63:2260:67:2400:-176.259,0,-160.325	0/1:225:136,89:136:4884:89:3196:-219.758,0,-354.268	0/1:18:3,15:3:108:15:540:-42.4477,0,-4.65663	0/1:351:135,216:135:4824:216:7728:-589.043,0,-325.469	0/1:157:84,73:84:3016:73:2628:-184.549,0,-221.872	0/1:112:65,47:65:2324:47:1676:-116.898,0,-172.901	0/1:128:36,92:36:1296:92:3277:-256.351,0,-77.4452	0/1:246:126,120:126:4496:120:4307:-307.235,0,-320.48	0/1:277:114,163:114:4096:163:5828:-427.239,0,-280.7	0/1:97:62,35:62:2216:35:1256:-83.7096,0,-157.561	0/1:78:40,38:40:1432:38:1352:-97.021,0,-102.294	0/1:132:97,35:97:3465:35:1260:-71.7778,0,-250.852	0/1:34:19,15:19:684:15:528:-37.3668,0,-48.7356	0/1:171:63,108:63:2260:108:3880:-295.29,0,-148.421	0/1:163:59,103:59:2112:103:3688:-278.299,0,-137.598	0/1:338:178,160:178:6384:160:5723:-410.558,0,-466.973	0/1:298:100,198:100:3584:198:7092:-548.087,0,-227.326	0/1:122:48,74:48:1720:74:2648:-197.971,0,-112.557	0/1:205:98,107:98:3512:107:3829:-278.954,0,-248.649	0/1:15:8,7:8:288:7:252:-18.4261,0,-21.752	0/1:153:40,113:40:1428:113:4048:-317.735,0,-79.8211	0/1:136:61,75:61:2180:75:2668:-196.158,0,-151.607	0/1:313:159,154:159:5692:154:5520:-393.476,0,-413.61	0/1:112:72,40:72:2584:40:1436:-95.4463,0,-191.692	0/1:133:72,61:72:2580:61:2184:-156.448,0,-184.981	0/1:149:93,56:93:3340:56:2016:-135.27,0,-234.173	0/1:238:127,111:127:4548:111:3984:-279.297,0,-324.692	0/1:59:34,25:34:1220:25:892:-61.9203,0,-89.9795	0/1:139:80,59:80:2876:59:2120:-146.919,0,-205.76	0/1:186:111,75:111:3983:75:2688:-184.828,0,-288.896	0/1:87:56,31:56:1988:31:1116:-74.2262,0,-145.322	0/1:191:109,82:109:3900:82:2924:-204.329,0,-282.424	0/1:86:54,32:54:1928:32:1082:-70.2481,0,-141.268	0/1:214:107,107:107:3832:107:3840:-281.061,0,-268.715	0/1:232:149,83:149:5333:83:2976:-197.888,0,-381.712
chr02	23322620	.	G	A	82896.5	PASS	AB=0.381926;ABP=1786.5;AC=94;AF=0.5;AN=188;AO=5625;CIGAR=1X;DP=14728;DPB=14728;DPRA=0;EPP=12208.9;EPPR=14734.3;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.2119;MQMR=48.3563;NS=94;NUMALT=1;ODDS=87.3604;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=200694;QR=323527;RO=9102;RPL=0;RPP=12217.5;RPPR=19767.8;RPR=5625;RUN=1;SAF=5624;SAP=12208.9;SAR=1;SRF=8480;SRP=14734.3;SRR=622;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:94:48,46:48:1724:46:1641:-119.651,0,-121.831	0/1:67:37,30:37:1275:30:1061:-75.6304,0,-91.4614	0/1:293:191,102:191:6767:102:3656:-240.775,0,-505.96	0/1:273:176,97:176:6256:97:3457:-229.133,0,-471.406	0/1:46:34,12:34:1190:12:428:-25.0007,0,-86.527	0/1:44:33,11:33:1180:11:396:-22.702,0,-88.904	0/1:67:40,27:40:1436:27:964:-66.8342,0,-104.501	0/1:309:210,99:210:7440:99:3510:-220.616,0,-566.07	0/1:209:96,113:96:3417:113:4015:-297.836,0,-239.88	0/1:138:97,41:97:3408:41:1457:-89.8818,0,-260.439	0/1:144:101,43:101:3518:43:1536:-95.1146,0,-257.779	0/1:263:195,68:195:6938:68:2436:-140.167,0,-514.848	0/1:147:95,52:95:3382:52:1860:-123.393,0,-248.816	0/1:143:92,51:92:3276:51:1824:-121.362,0,-239.786	0/1:124:75,49:75:2677:49:1749:-120.346,0,-194.72	0/1:157:98,59:98:3484:59:2120:-142.951,0,-248.184	0/1:93:77,16:77:2768:16:576:-24.1615,0,-201.731	0/1:58:37,21:37:1328:21:756:-50.8228,0,-93.8758	0/1:77:52,25:52:1868:25:896:-57.7625,0,-137.107	0/1:261:160,101:160:5675:101:3586:-244.306,0,-411.326	0/1:299:174,125:174:6181:125:4450:-309.954,0,-461.17	0/1:134:80,54:80:2864:54:1932:-133.794,0,-209.637	0/1:272:198,74:198:7058:74:2625:-154.429,0,-545.43	0/1:95:67,28:67:2378:28:1004:-62.0765,0,-182.844	0/1:132:67,65:67:2389:65:2309:-168.29,0,-170.524	0/1:390:239,151:239:8451:151:5403:-367.951,0,-636.907	0/1:391:251,140:251:8884:140:4960:-327.338,0,-672.431	0/1:85:67,18:67:2403:18:644:-32.7021,0,-180.435	0/1:403:259,144:259:9183:144:5112:-338.025,0,-689.46	0/1:175:120,55:120:4246:55:1980:-125.77,0,-325.294	0/1:179:97,82:97:3412:82:2914:-207.57,0,-243.49	0/1:9:2,7:2:72:7:248:-19.9441,0,-4.11443	0/1:33:26,7:26:913:7:252:-13.095,0,-71.2337	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.7765	0/1:17:8,9:8:288:9:324:-24.3883,0,-18.5467	0/1:17:11,6:11:396:6:216:-14.673,0,-30.4534	0/1:399:212,187:212:7546:187:6699:-481.811,0,-539.22	0/1:149:91,58:91:3243:58:2073:-141.872,0,-239.74	0/1:92:53,39:53:1891:39:1396:-98.2443,0,-136.87	0/1:6:4,2:4:144:2:72:-5.03054,0,-10.5395	0/1:186:104,82:104:3685:82:2944:-208.682,0,-274.525	0/1:91:56,35:56:1993:35:1252:-85.5807,0,-143.816	0/1:217:156,61:156:5573:61:2196:-132.518,0,-425.32	0/1:140:86,54:86:3050:54:1932:-131.846,0,-216.613	0/1:139:98,41:98:3469:41:1468:-90.5667,0,-250.864	0/1:215:102,113:102:3566:113:3996:-294.925,0,-250.6	0/1:191:127,64:127:4537:64:2251:-144.829,0,-333.098	0/1:326:172,154:172:6160:154:5528:-399.147,0,-447.693	0/1:144:60,84:60:2141:84:3012:-226.924,0,-143.52	0/1:175:113,62:113:4049:62:2171:-141.921,0,-305.906	0/1:151:75,76:75:2658:76:2690:-196.61,0,-188.297	0/1:10:8,2:8:288:2:72:-3.82642,0,-22.2853	0/1:180:121,59:121:4329:59:2067:-132.11,0,-330.225	0/1:70:44,26:44:1554:26:936:-63.4572,0,-116.887	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.42609	0/1:230:140,90:140:5008:90:3217:-219.746,0,-372.886	0/1:77:40,37:40:1421:37:1316:-95.5472,0,-102.119	0/1:14:11,3:11:396:3:108:-5.86075,0,-30.7595	0/1:22:9,13:9:320:13:468:-35.8288,0,-22.1514	0/1:135:78,57:78:2778:57:2044:-143.112,0,-204.344	0/1:233:145,88:145:5200:88:3160:-214.456,0,-377.277	0/1:16:13,3:13:445:3:108:-5.25869,0,-35.5278	0/1:360:227,133:227:8120:133:4776:-321.493,0,-616.434	0/1:164:81,83:81:2893:83:2976:-218.622,0,-203.104	0/1:113:57,56:57:2029:56:2001:-146.324,0,-145.534	0/1:134:96,38:96:3414:38:1353:-81.5722,0,-265.852	0/1:251:138,113:138:4944:113:4015:-285.883,0,-353.137	0/1:279:170,109:170:6066:109:3905:-267.295,0,-442.289	0/1:103:75,28:75:2675:28:1008:-59.7969,0,-191.097	0/1:78:46,32:46:1637:32:1121:-77.6524,0,-119.671	0/1:139:104,35:104:3633:35:1256:-70.8995,0,-263.084	0/1:36:18,18:18:621:18:644:-47.4411,0,-42.5525	0/1:175:116,59:116:4110:59:2112:-137.634,0,-307.259	0/1:164:107,57:107:3818:57:2033:-133.724,0,-285.527	0/1:344:180,164:180:6388:164:5869:-424.138,0,-461.871	0/1:308:216,92:216:7685:92:3269:-201.572,0,-591.585	0/1:121:79,42:79:2817:42:1489:-97.4343,0,-208.041	0/1:213:122,91:122:4320:91:3230:-226.442,0,-313.428	0/1:15:7,8:7:252:8:288:-21.752,0,-18.4261	0/1:157:121,36:121:4314:36:1262:-66.5207,0,-338.526	0/1:142:85,56:85:3025:56:1995:-136.59,0,-220.573	0/1:319:164,155:164:5851:155:5511:-399.543,0,-417.274	0/1:114:61,53:61:2184:53:1904:-137.311,0,-154.076	0/1:135:81,54:81:2895:54:1936:-133.701,0,-210.8	0/1:151:121,30:121:4317:30:1080:-51.5604,0,-317.377	0/1:237:143,94:143:5121:94:3376:-232.669,0,-369.558	0/1:59:31,28:31:1112:28:993:-71.7287,0,-79.6652	0/1:139:92,47:92:3287:47:1688:-110.26,0,-240.473	0/1:190:115,75:115:4068:75:2684:-183.902,0,-294.702	0/1:89:54,35:54:1909:35:1252:-86.1934,0,-137.085	0/1:192:114,78:114:4059:78:2754:-189.991,0,-296.157	0/1:90:52,38:52:1708:38:1359:-95.4807,0,-114.923	0/1:221:125,96:125:4405:96:3422:-241.126,0,-317.057	0/1:236:168,68:168:5993:68:2444:-149.172,0,-434.436
chr02	23322641	.	C	T	83312.5	PASS	AB=0.381717;ABP=1780.39;AC=94;AF=0.5;AN=188;AO=5583;CIGAR=1X;DP=14626;DPB=14626;DPRA=0;EPP=12039.6;EPPR=13544.4;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.2364;MQMR=48.3368;NS=94;NUMALT=1;ODDS=87.6059;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199756;QR=320460;RO=9037;RPL=5574;RPP=12048.3;RPPR=18429.4;RPR=9;RUN=1;SAF=5582;SAP=12117.7;SAR=1;SRF=8412;SRP=14573.4;SRR=625;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:96:49,46:49:1743:46:1652:-120.042,0,-123.193	0/1:67:38,29:38:1350:29:1040:-73.7454,0,-98.1	0/1:292:191,101:191:6751:101:3621:-237.902,0,-505.672	0/1:269:175,93:175:6216:93:3307:-217.051,0,-470.808	0/1:46:34,12:34:1203:12:428:-25.0007,0,-86.5021	0/1:43:32,11:32:1139:11:396:-23.003,0,-85.8231	0/1:66:40,26:40:1436:26:932:-64.2573,0,-104.731	0/1:308:211,97:211:7468:97:3488:-219.024,0,-568.16	0/1:209:97,112:97:3438:112:4011:-298.004,0,-240.747	0/1:133:92,41:92:3273:41:1446:-90.3949,0,-249.128	0/1:143:100,43:100:3526:43:1539:-95.6848,0,-259.043	0/1:265:197,68:197:6910:68:2392:-135.671,0,-513.023	0/1:146:92,53:92:3253:53:1900:-127.236,0,-237.965	0/1:144:93,51:93:3335:51:1819:-120.621,0,-243.536	0/1:128:80,48:80:2837:48:1715:-116.085,0,-204.759	0/1:157:99,58:99:3465:58:2088:-139.84,0,-246.736	0/1:93:77,16:77:2744:16:576:-24.1615,0,-200.294	0/1:59:38,21:38:1343:21:756:-50.5218,0,-94.685	0/1:74:49,25:49:1738:25:900:-59.0262,0,-127.247	0/1:263:158,105:158:5639:105:3761:-259.426,0,-404.972	0/1:294:170,124:170:6014:124:4442:-310.872,0,-447.458	0/1:132:78,54:78:2758:54:1934:-134.579,0,-204.121	0/1:269:195,74:195:6928:74:2641:-156.766,0,-534.583	0/1:95:67,28:67:2370:28:1008:-62.437,0,-182.143	0/1:128:64,64:64:2273:64:2283:-167.149,0,-162.358	0/1:382:232,150:232:8271:150:5384:-368.644,0,-619.557	0/1:388:247,141:247:8767:141:5047:-336.065,0,-664.486	0/1:84:66,18:66:2345:18:648:-33.3645,0,-175.992	0/1:396:253,143:253:8976:143:5127:-341.144,0,-673.614	0/1:172:117,55:117:4155:55:1963:-125.143,0,-317.841	0/1:177:95,82:95:3367:82:2929:-210.272,0,-240.244	0/1:9:2,7:2:72:7:252:-20.3089,0,-4.11443	0/1:34:27,7:27:968:7:252:-12.7939,0,-75.8131	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.7765	0/1:17:8,9:8:288:9:324:-24.3883,0,-18.5467	0/1:16:11,5:11:392:5:180:-11.7356,0,-30.3981	0/1:396:211,185:211:7461:185:6629:-476.439,0,-532.376	0/1:148:91,57:91:3199:57:2020:-137.405,0,-235.754	0/1:93:53,40:53:1892:40:1440:-101.902,0,-136.531	0/1:6:4,2:4:144:2:72:-5.03054,0,-10.5395	0/1:186:103,83:103:3626:83:2968:-211.054,0,-269.233	0/1:91:55,36:55:1958:36:1296:-88.5182,0,-141.344	0/1:215:154,61:154:5485:61:2166:-130.428,0,-418.407	0/1:138:85,53:85:3010:53:1899:-129.475,0,-214.742	0/1:139:98,41:98:3455:41:1476:-91.2868,0,-249.741	0/1:211:101,110:101:3579:110:3937:-290.766,0,-250.581	0/1:188:125,63:125:4416:63:2255:-146.077,0,-323.903	0/1:320:169,151:169:5953:151:5367:-386.799,0,-431.414	0/1:145:60,85:60:2152:85:3028:-228.067,0,-144.28	0/1:172:111,61:111:3949:61:2177:-144.112,0,-297.82	0/1:147:73,74:73:2570:74:2651:-194.302,0,-181.429	0/1:10:8,2:8:288:2:72:-3.82642,0,-22.2853	0/1:179:119,60:119:4252:60:2152:-140.063,0,-323.643	0/1:69:44,25:44:1555:25:900:-60.5198,0,-117.626	0/1:5:3,2:3:104:2:72:-5.33157,0,-8.0603	0/1:228:140,88:140:4972:88:3156:-214.862,0,-372.197	0/1:76:38,38:38:1347:38:1342:-98.1932,0,-95.8389	0/1:14:11,3:11:392:3:108:-5.86075,0,-30.4375	0/1:23:11,12:11:384:12:432:-32.2975,0,-27.5706	0/1:135:79,56:79:2803:56:2007:-139.792,0,-205.755	0/1:234:145,88:145:5123:88:3160:-214.185,0,-372.39	0/1:18:15,3:15:536:3:108:-4.65663,0,-42.0897	0/1:357:224,133:224:7985:133:4784:-323.11,0,-605.227	0/1:165:82,83:82:2915:83:2975:-218.241,0,-204.908	0/1:113:56,56:56:1968:56:2012:-147.326,0,-140.122	0/1:131:94,37:94:3368:37:1328:-80.2459,0,-262.541	0/1:248:135,113:135:4787:113:4034:-288.494,0,-340.435	0/1:275:166,109:166:5867:109:3911:-269.039,0,-428.862	0/1:98:70,28:70:2503:28:1008:-61.3021,0,-177.556	0/1:77:47,30:47:1672:30:1067:-73.0993,0,-122.477	0/1:139:104,35:104:3711:35:1247:-70.0883,0,-268.305	0/1:35:18,17:18:631:17:597:-43.5137,0,-43.7623	0/1:176:117,59:117:4141:59:2116:-137.692,0,-309.944	0/1:162:107,55:107:3801:55:1967:-128.408,0,-285.136	0/1:339:180,159:180:6433:159:5697:-410.179,0,-466.481	0/1:307:215,92:215:7641:92:3300:-204.665,0,-586.837	0/1:120:77,43:77:2706:43:1539:-102.235,0,-197.857	0/1:209:120,89:120:4262:89:3196:-224.487,0,-310.475	0/1:15:7,8:7:252:8:288:-21.752,0,-18.4261	0/1:153:119,34:119:4239:34:1214:-63.4744,0,-333.258	0/1:144:87,57:87:3076:57:2039:-139.994,0,-225.036	0/1:317:164,153:164:5845:153:5483:-397.642,0,-416.199	0/1:116:62,54:62:2213:54:1918:-137.964,0,-155.921	0/1:135:81,54:81:2833:54:1944:-134.416,0,-207.185	0/1:151:120,31:120:4260:31:1112:-54.6539,0,-313.479	0/1:238:145,93:145:5139:93:3298:-225.339,0,-370.174	0/1:59:32,27:32:1135:27:949:-67.9551,0,-81.4571	0/1:140:94,46:94:3326:46:1643:-105.91,0,-243.061	0/1:190:115,75:115:4089:75:2687:-182.982,0,-297.234	0/1:90:56,34:56:1991:34:1224:-83.3743,0,-143.79	0/1:191:114,77:114:3991:77:2746:-189.778,0,-291.121	0/1:93:55,38:55:1926:38:1360:-94.6732,0,-134.565	0/1:219:123,95:123:4317:95:3382:-238.207,0,-311.17	0/1:235:166,69:166:5901:69:2476:-152.351,0,-427.524
chr02	23322644	.	C	T	95441.9	PASS	AB=0.441262;ABP=404.786;AC=93;AF=0.494681;AN=188;AO=5917;CIGAR=1X;DP=13420;DPB=13420;DPRA=0;EPP=12842.9;EPPR=16265.2;GTI=1;LEN=1;MEANALT=1.06383;MQM=53.6721;MQMR=54.5337;NS=94;NUMALT=1;ODDS=99.5996;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=211919;QR=267584;RO=7497;RPL=5915;RPP=12834.2;RPPR=16273.9;RPR=2;RUN=1;SAF=5916;SAP=12842.9;SAR=1;SRF=7496;SRP=16273.9;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:85:46,39:46:1648:39:1390:-99.3851,0,-121.453	0/1:62:32,30:32:1139:30:1072:-77.8039,0,-81.1958	0/1:282:180,102:180:6409:102:3642:-242.028,0,-481.259	0/1:271:102,169:102:3638:169:6043:-458.267,0,-238.868	0/1:42:32,10:32:1144:10:360:-20.0312,0,-83.5947	0/1:43:28,15:28:1000:15:536:-35.4765,0,-73.7058	0/1:63:39,24:39:1395:24:860:-58.6921,0,-103.418	0/1:300:105,195:105:3750:195:6977:-534.902,0,-240.104	0/1:203:115,88:115:4099:88:3164:-222.447,0,-305.446	0/1:129:45,84:45:1616:84:3014:-231.784,0,-104.061	0/1:107:43,63:43:1536:63:2268:-171.91,0,-103.293	0/1:198:126,72:126:4472:72:2545:-167.218,0,-335.804	0/1:119:55,64:55:1956:64:2288:-169.687,0,-139.583	0/1:112:80,32:80:2836:32:1152:-70.0785,0,-220.653	0/1:109:74,35:74:2643:35:1247:-77.3811,0,-202.014	0/1:106:85,21:85:3015:21:756:-36.3321,0,-237.124	0/1:42:17,25:17:612:25:896:-68.05,0,-40.9385	0/1:35:22,13:22:792:13:468:-31.7833,0,-60.8985	0/1:55:28,27:28:995:27:968:-70.6062,0,-73.095	0/1:259:191,68:191:6843:68:2442:-141.868,0,-514.993	0/1:291:126,165:126:4490:165:5898:-441.957,0,-313.202	0/1:130:61,69:61:2192:69:2476:-183.729,0,-151.618	0/1:271:79,190:79:2820:190:6809:-531.006,0,-165.128	0/1:94:30,64:30:1080:64:2296:-178.127,0,-67.5844	0/1:123:65,58:65:2328:58:2065:-148.683,0,-170.25	0/1:384:157,226:157:5599:226:8100:-610.02,0,-381.385	0/1:388:149,239:149:5321:239:8528:-649.257,0,-353.391	0/1:56:20,36:20:716:36:1296:-99.8645,0,-46.792	0/1:397:272,125:272:9711:125:4470:-281.839,0,-740.566	0/1:172:106,66:106:3766:66:2366:-160.968,0,-284.141	0/1:170:127,42:127:4564:42:1495:-83.6295,0,-352.272	0/1:9:7,2:7:248:2:72:-4.11443,0,-19.9441	0/1:30:6,24:6:216:24:860:-68.4149,0,-10.7596	0/1:9:4,5:4:144:5:180:-13.7765,0,-10.6043	0/1:14:11,3:11:396:3:108:-5.82773,0,-29.9536	0/1:17:10,7:10:356:7:248:-17.482,0,-26.9658	0/1:362:261,101:261:9328:101:3628:-217.31,0,-721.067	0/1:144:102,42:102:3655:42:1508:-92.4179,0,-279.638	0/1:78:40,38:40:1440:38:1364:-98.872,0,-105.86	0/1:6:4,2:4:144:2:72:-4.95714,0,-10.6109	0/1:185:85,100:85:3028:100:3566:-264.661,0,-216.253	0/1:70:36,34:36:1264:34:1224:-89.2004,0,-91.9557	0/1:202:126,76:126:4515:76:2736:-185.141,0,-339.042	0/1:113:85,28:85:3006:28:995:-55.7873,0,-230.754	0/1:85:60,25:60:2118:25:900:-55.6555,0,-161.78	0/1:213:119,94:119:4271:94:3375:-237.145,0,-315.313	0/1:185:130,55:130:4645:55:1972:-121.032,0,-347.152	0/1:318:156,162:156:5531:162:5805:-426.303,0,-394.895	0/1:142:121,21:121:4328:21:752:-25.2044,0,-340.741	0/1:166:63,103:63:2256:103:3689:-281.856,0,-149.563	0/1:152:112,40:112:4007:40:1425:-82.0591,0,-309.419	0/1:10:5,5:5:180:5:176:-13.1603,0,-12.9533	0/1:174:62,112:62:2228:112:4032:-309.533,0,-146.744	0/1:64:27,37:27:972:37:1319:-99.4817,0,-68.4321	0/1:5:2,3:2:72:3:108:-8.42609,0,-5.33157	0/1:228:157,71:157:5613:71:2548:-160.317,0,-428.549	0/1:70:37,33:37:1328:33:1179:-85.2642,0,-97.4899	0/0:13:12,1:12:432:1:36:0,-0.318822,-34.995	0/1:23:18,5:18:648:5:180:-9.6015,0,-51.3084	0/1:127:88,39:88:3140:39:1404:-88.0829,0,-240.709	0/1:186:94,92:94:3364:92:3303:-241.248,0,-242.732	0/1:17:3,14:3:99:14:504:-40.536,0,-4.11907	0/1:356:138,218:138:4922:218:7830:-596.701,0,-331.071	0/1:158:124,34:124:4445:34:1220:-62.4202,0,-345.829	0/1:106:72,34:72:2584:34:1209:-76.9469,0,-200.586	0/1:134:41,93:41:1467:93:3325:-258.864,0,-90.7329	0/1:239:168,71:168:5979:71:2544:-157.063,0,-454.36	0/1:271:200,71:200:7140:71:2533:-146.163,0,-545.292	0/1:68:47,21:47:1651:21:748:-47.0435,0,-123.866	0/1:69:46,23:46:1628:23:828:-53.8233,0,-124.665	0/1:71:54,17:54:1884:17:612:-33.9614,0,-146.317	0/1:36:20,16:20:716:16:572:-40.7438,0,-51.0055	0/1:175:68,107:68:2423:107:3818:-288.536,0,-158.763	0/1:159:105,54:105:3751:54:1940:-126.14,0,-282.918	0/1:327:166,161:166:5951:161:5711:-414.249,0,-435.975	0/1:293:91,202:91:3249:202:7260:-564.658,0,-198.689	0/1:118:87,31:87:3107:31:1116:-64.8882,0,-235.729	0/1:206:138,68:138:4904:68:2448:-157.818,0,-370.277	0/1:14:7,7:7:252:7:244:-18.0161,0,-18.8145	0/1:151:37,114:37:1315:114:4081:-321.284,0,-71.9041	0/1:138:97,41:97:3479:41:1472:-90.7328,0,-264.26	0/1:314:231,83:231:8251:83:2975:-173.233,0,-635.053	0/1:96:56,40:56:1991:40:1432:-99.9064,0,-149.002	0/1:115:55,60:55:1976:60:2152:-158.989,0,-140.207	0/1:90:34,56:34:1215:56:1997:-152.194,0,-77.1232	0/1:209:151,58:151:5393:58:2088:-125.107,0,-411.348	0/1:51:34,16:34:1220:16:572:-36.2948,0,-93.9888	0/1:106:67,39:67:2404:39:1400:-93.892,0,-182.867	0/1:155:79,76:79:2794:76:2723:-197.268,0,-202.455	0/1:68:46,22:46:1652:22:790:-50.7867,0,-127.741	0/1:164:115,49:115:4087:49:1764:-108.343,0,-317.618	0/1:75:62,13:62:2215:13:468:-19.8464,0,-168.606	0/1:217:109,108:109:3863:108: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chr02	23322649	.	GCA	ACT	84980.6	PASS	AB=0.4139;ABP=875.758;AC=94;AF=0.5;AN=188;AO=5610;CIGAR=1X1M1X;DP=13554;DPB=13556;DPRA=0;EPP=12176.3;EPPR=16725.5;GTI=0;LEN=3;MEANALT=2.43617;MQM=59.2194;MQMR=51.069;NS=94;NUMALT=1;ODDS=100.37;PAIRED=0;PAIREDR=0;PAO=4;PQA=144;PQR=17;PRO=0.5;QA=197103;QR=266204;RO=7701;RPL=5610;RPP=12185;RPPR=16716.8;RPR=0;RUN=1;SAF=5609;SAP=12176.3;SAR=1;SRF=7700;SRP=16716.8;SRR=1;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:86:40,46:40:1384:46:1585:-117.018,0,-97.2045	0/1:62:32,29:32:1101:29:1025:-73.8766,0,-79.1301	0/1:283:180,99:180:6128:99:3507:-231.371,0,-460.123	0/1:273:171,96:171:5945:96:3361:-222.027,0,-446.546	0/1:43:30,12:30:1006:12:410:-24.2706,0,-73.0076	0/1:43:30,11:30:1052:11:388:-22.554,0,-79.4448	0/1:63:35,27:35:1231:27:917:-64.0073,0,-91.0274	0/1:301:197,99:197:6804:99:3473:-221.104,0,-518.506	0/1:205:88,112:88:3066:112:3962:-296.049,0,-212.871	0/1:128:85,40:85:2950:40:1403:-88.6211,0,-226.877	0/1:109:66,42:66:2217:42:1497:-102.25,0,-165.755	0/1:198:129,69:129:4434:69:2404:-156.96,0,-332.442	0/1:119:64,53:64:2185:53:1893:-135.117,0,-160.858	0/1:111:58,51:58:1962:51:1766:-126.063,0,-143.26	0/1:109:59,49:59:2025:49:1725:-122.72,0,-145.309	0/1:109:47,60:47:1642:60:2102:-155.073,0,-114.677	0/1:42:25,16:25:865:16:574:-39.4631,0,-65.4331	0/1:35:14,21:14:497:21:746:-56.8436,0,-34.341	0/1:55:28,25:28:976:25:881:-63.316,0,-71.5607	0/1:261:154,103:154:5325:103:3624:-248.009,0,-386.748	0/1:297:168,126:168:5777:126:4406:-306.744,0,-430.007	0/1:134:76,54:76:2615:54:1896:-131.477,0,-191.26	0/1:273:193,74:193:6596:74:2558:-149.635,0,-509.966	0/1:95:65,29:65:2277:29:1012:-62.7332,0,-175.179	0/1:127:59,64:59:2041:64:2245:-164.914,0,-144.868	0/1:388:229,149:229:7900:149:5266:-359.789,0,-589.782	0/1:391:246,142:246:8544:142:4983:-330.085,0,-645.327	0/1:56:36,18:36:1263:18:640:-41.3726,0,-97.2185	0/1:395:249,140:249:8628:140:4921:-325.635,0,-651.247	0/1:175:118,55:118:3993:55:1952:-123.615,0,-306.131	0/1:169:87,80:87:3018:80:2830:-204.098,0,-216.087	0/1:9:2,7:2:70:7:247:-19.8528,0,-3.92742	0/1:30:24,6:24:820:6:212:-10.3941,0,-64.893	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.7765	0/1:15:6,9:6:216:9:318:-24.4455,0,-13.4128	0/1:17:11,6:11:382:6:190:-12.2933,0,-29.2549	0/1:365:173,184:173:5917:184:6490:-476.261,0,-419.814	0/1:146:83,58:83:2886:58:2047:-141.638,0,-213.379	0/1:80:36,40:36:1225:40:1418:-104.705,0,-87.057	0/1:6:3,2:3:100:2:72:-5.03506,0,-7.51248	0/1:187:102,83:102:3579:83:2941:-208.664,0,-265.604	0/1:70:34,36:34:1180:36:1272:-92.68,0,-85.2723	0/1:206:138,61:138:4760:61:2134:-132.048,0,-364.396	0/1:113:59,53:59:2039:53:1863:-133.768,0,-144.909	0/1:88:45,40:45:1522:40:1414:-101.706,0,-109.811	0/1:214:98,112:98:3408:112:3950:-292.017,0,-237.558	0/1:185:116,63:116:4008:63:2200:-143.889,0,-297.436	0/1:325:168,153:168:5864:153:5338:-383.568,0,-425.564	0/1:144:57,84:57:1989:84:2980:-225.696,0,-132.346	0/1:170:104,62:104:3608:62:2160:-143.8,0,-274.354	0/1:152:73,76:73:2483:76:2669:-195.159,0,-174.112	0/1:10:7,2:7:243:2:72:-3.81546,0,-19.0367	0/1:174:112,60:112:3972:60:2132:-140.104,0,-304.563	0/1:66:40,26:40:1399:26:927:-63.8595,0,-106.094	0/1:5:3,2:3:108:2:64:-4.57295,0,-8.42609	0/1:230:136,90:136:4747:90:3140:-213.873,0,-355.793	0/1:72:31,38:31:1053:38:1334:-99.2632,0,-73.9282	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.1947	0/1:23:10,12:10:351:12:430:-32.0586,0,-24.5667	0/1:129:69,59:69:2416:59:2064:-145.914,0,-176.994	0/1:187:95,87:95:3306:87:3065:-220.976,0,-241.151	0/1:17:14,3:14:491:3:98:-4.02628,0,-39.3684	0/1:361:220,134:220:7558:134:4705:-316.592,0,-569.99	0/1:162:75,83:75:2615:83:2951:-217.855,0,-182.1	0/1:106:49,57:49:1645:57:2002:-148.53,0,-116.003	0/1:135:93,38:93:3263:38:1305:-77.9665,0,-253.342	0/1:241:126,114:126:4280:114:3991:-286.733,0,-303.396	0/1:275:165,108:165:5743:108:3795:-259.13,0,-421.193	0/1:68:38,27:38:1306:27:957:-66.4304,0,-94.7931	0/1:69:38,31:38:1352:31:1065:-75.3339,0,-99.7467	0/1:72:37,35:37:1268:35:1204:-86.5335,0,-90.7624	0/1:36:18,18:18:602:18:623:-45.5456,0,-41.5443	0/1:176:113,59:113:3898:59:2092:-136.435,0,-293.2	0/1:161:105,56:105:3660:56:1975:-129.425,0,-274.326	0/1:330:163,162:163:5552:162:5734:-417.734,0,-400.57	0/1:301:206,92:206:7225:92:3249:-202.561,0,-556.233	0/1:121:78,42:78:2722:42:1466:-95.6954,0,-200.749	0/1:207:111,91:111:3880:91:3213:-228.026,0,-280.516	0/1:15:7,8:7:239:8:286:-21.57,0,-17.2606	0/1:155:117,35:117:4096:35:1222:-64.1517,0,-321.186	0/1:140:77,57:77:2672:57:1990:-138.42,0,-196.65	0/1:318:158,155:158:5480:155:5456:-396.25,0,-388.269	0/1:96:40,54:40:1337:54:1877:-140.605,0,-90.3208	0/1:117:62,54:62:2131:54:1908:-136.753,0,-155.182	0/1:91:57,31:57:1980:31:1077:-70.4269,0,-149.67	0/1:211:114,95:114:3911:95:3298:-233.797,0,-280.039	0/1:52:25,27:25:874:27:946:-69.7936,0,-62.4387	0/1:107:59,47:59:2039:47:1666:-117.969,0,-149.781	0/1:157:78,76:78:2703:76:2673:-192.244,0,-195.582	0/1:68:32,33:32:1105:33:1159:-84.7261,0,-79.6385	0/1:164:83,78:83:2884:78:2723:-196.417,0,-209.801	0/1:76:34,38:34:1120:38:1343:-99.2087,0,-76.5573	0/1:217:116,96:116:3992:96:3359:-237.964,0,-288.381	0/1:157:85,67:85:2943:67:2348:-165.558,0,-217.413
chr02	23419450	.	T	A	622006	PASS	AB=0.620963;ABP=821.481;AC=156;AF=0.829787;AN=188;AO=27900;CIGAR=1X;DP=30429;DPB=30429;DPRA=0;EPP=60587.1;EPPR=5425.18;GTI=4;LEN=1;MEANALT=1.2234;MQM=59.9933;MQMR=59.9864;NS=94;NUMALT=1;ODDS=14.9995;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=993259;QR=89351;RO=2497;RPL=98;RPP=59738.9;RPPR=4867.06;RPR=27802;RUN=1;SAF=98;SAP=59738.9;SAR=27802;SRF=66;SRP=4867.06;SRR=2431;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:53:0,53:0:0:53:1881:-169.567,-15.9546,0	1/1:432:0,432:0:0:432:15375:-1383.47,-130.045,0	1/1:60:0,60:0:0:60:2144:-193.226,-18.0618,0	1/1:205:0,205:0:0:205:7248:-652.374,-61.7112,0	0/1:95:52,41:52:1864:41:1458:-103.159,0,-139.684	0/1:43:6,37:6:207:37:1314:-105.616,0,-6.0226	0/1:186:75,111:75:2692:111:3945:-299.248,0,-186.533	1/1:114:4,109:4:144:109:3893:-337.249,-21.0626,0	1/1:110:0,110:0:0:110:3921:-353.083,-33.1133,0	1/1:165:0,165:0:0:165:5831:-524.907,-49.67,0	1/1:1235:1,1233:1:32:1233:43730:-3931.04,-368.612,0	1/1:55:0,55:0:0:55:1946:-175.415,-16.5567,0	1/1:134:0,134:0:0:134:4773:-429.728,-40.338,0	0/1:240:106,133:106:3800:133:4742:-354.633,0,-269.892	0/1:95:38,57:38:1364:57:2015:-153.022,0,-94.4629	0/1:89:32,57:32:1136:57:2036:-156.721,0,-75.7572	1/1:132:0,132:0:0:132:4665:-420.014,-39.736,0	1/1:113:0,113:0:0:113:4020:-361.989,-34.0164,0	1/1:474:0,473:0:0:473:16847:-1515.67,-142.387,0	0/1:294:117,177:117:4191:177:6293:-477.962,0,-288.868	1/1:258:1,257:1:36:257:9170:-821.674,-74.0675,0	1/1:124:0,124:0:0:124:4406:-396.713,-37.3277,0	1/1:59:1,58:1:36:58:2041:-180.36,-14.1625,0	1/1:80:0,80:0:0:80:2839:-255.747,-24.0824,0	1/1:103:0,103:0:0:103:3642:-327.984,-31.0061,0	1/1:476:1,475:1:32:475:16928:-1520.38,-140.503,0	1/1:327:0,327:0:0:327:11648:-1048.19,-98.4368,0	1/1:45:0,44:0:0:44:1543:-138.799,-13.2453,0	0/1:342:171,169:171:6125:169:6051:-441.983,0,-448.638	0/1:184:65,119:65:2327:119:4253:-327.558,0,-154.3	0/1:142:54,87:54:1908:87:3100:-236.46,0,-129.229	1/1:1424:1,1422:1:36:1422:50675:-4555.37,-425.127,0	1/1:1833:1,1831:1:36:1831:65312:-5872.1,-548.249,0	1/1:1245:1,1244:1:36:1244:44283:-3980.35,-371.184,0	1/1:3553:1,3549:1:36:3549:126590:-11384.2,-1065.4,0	1/1:927:1,926:1:36:926:32965:-2962.24,-275.457,0	0/1:275:110,165:110:3935:165:5879:-446.437,0,-271.559	0/1:227:101,126:101:3602:126:4508:-337.555,0,-256.052	1/1:763:0,763:0:0:763:27114:-2439.49,-229.686,0	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	1/1:177:0,177:0:0:177:6344:-571.049,-53.2823,0	1/1:333:0,333:0:0:333:11827:-1064.3,-100.243,0	0/1:156:41,115:41:1467:115:4104:-322.584,0,-85.3647	0/1:91:44,46:44:1576:46:1629:-119.444,0,-114.679	0/1:72:28,44:28:1008:44:1559:-118.927,0,-69.3622	1/1:109:0,109:0:0:109:3899:-351.103,-32.8123,0	1/1:89:0,89:0:0:89:3161:-284.713,-26.7917,0	0/1:190:62,128:62:2206:128:4604:-357.326,0,-141.608	0/1:130:60,70:60:2148:70:2470:-183.418,0,-154.454	1/1:234:0,234:0:0:234:8298:-746.832,-70.441,0	0/1:224:118,106:118:4220:106:3752:-270.449,0,-312.55	1/1:923:16,907:16:576:907:32307:-2854.46,-225.676,0	1/1:199:0,199:0:0:199:7053:-634.832,-59.905,0	1/1:64:0,64:0:0:64:2274:-204.921,-19.2659,0	1/1:403:0,398:0:0:398:14157:-1273.54,-119.81,0	0/1:166:54,112:54:1925:112:3997:-309.947,0,-123.554	1/1:30:0,30:0:0:30:1072:-96.7925,-9.0309,0	1/1:415:8,407:8:288:407:14465:-1275.33,-98.66,0	1/1:730:18,712:18:648:712:25382:-2225.02,-161.1,0	0/1:166:81,85:81:2912:85:3048:-224.578,0,-212.344	1/1:205:3,202:3:108:202:7167:-635.012,-51.636,0	1/1:832:0,831:0:0:831:29643:-2666.63,-250.156,0	1/1:110:0,110:0:0:110:3917:-352.721,-33.1133,0	0/1:229:105,124:105:3747:124:4448:-331.554,0,-268.495	0/1:144:67,77:67:2404:77:2743:-203.764,0,-173.268	1/1:121:0,121:0:0:121:4314:-388.436,-36.4246,0	0/1:198:106,92:106:3808:92:3255:-233.567,0,-283.312	0/1:174:115,59:115:4120:59:2112:-137.969,0,-318.603	0/1:250:42,208:42:1504:208:7399:-590.702,0,-60.3971	1/1:50:0,50:0:0:50:1800:-162.282,-15.0515,0	0/1:161:65,95:65:2327:95:3359:-254.002,0,-161.165	1/1:913:1,912:1:36:912:32446:-2915.55,-271.242,0	1/1:238:0,238:0:0:238:8431:-758.798,-71.6451,0	1/1:62:0,62:0:0:62:2201:-198.354,-18.6639,0	1/1:250:0,250:0:0:250:8911:-801.974,-75.2575,0	1/1:186:1,185:1:36:185:6599:-590.392,-52.3933,0	1/1:116:6,110:6:216:110:3874:-329.064,-15.129,0	1/1:66:0,66:0:0:66:2354:-212.118,-19.868,0	1/1:1686:0,1682:0:0:1682:59870:-5385.74,-506.332,0	1/1:167:0,167:0:0:167:5929:-533.72,-50.272,0	1/1:73:1,71:1:36:71:2539:-225.162,-18.4357,0	0/1:226:108,118:108:3863:118:4199:-310.058,0,-279.832	1/1:165:0,165:0:0:165:5892:-530.389,-49.67,0	1/1:123:0,123:0:0:123:4376:-394.014,-37.0267,0	1/1:127:0,127:0:0:127:4529:-407.777,-38.2308,0	0/1:173:78,94:78:2796:94:3332:-247.961,0,-199.743	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:51:0,51:0:0:51:1811:-163.271,-15.3525,0	1/1:102:0,102:0:0:102:3634:-327.265,-30.7051,0	0/1:1036:120,914:120:4282:914:32498:-2612.24,0,-73.9722	0/1:337:149,187:149:5344:187:6632:-495.455,0,-379.586	0/1:91:51,40:51:1815:40:1415:-100.253,0,-136.237	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:106:1,105:1:36:105:3732:-332.482,-28.3109,0
chr02	23419492	.	C	T	38566	PASS	AB=0.381998;ABP=955.702;AC=43;AF=0.228723;AN=188;AO=3091;CIGAR=1X;DP=31746;DPB=31746;DPRA=1.28726;EPP=6663.02;EPPR=57499.8;GTI=4;LEN=1;MEANALT=1.10909;MQM=59.9922;MQMR=59.9864;NS=94;NUMALT=1;ODDS=0.782862;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110544;QR=1022447;RO=28636;RPL=3085;RPP=6663.02;RPPR=57508.2;RPR=6;RUN=1;SAF=0;SAP=6715.03;SAR=3091;SRF=1;SRP=62176.6;SRR=28635;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:55:55,0:55:1953:0:0:0,-16.5566,-176.044	0/0:441:441,0:441:15778:0:0:0,-132.754,-1419.7	0/1:118:60,58:60:2148:58:2065:-150.598,0,-158.066	0/0:208:208,0:208:7396:0:0:0,-62.6142,-665.686	0/1:68:34,34:34:1208:34:1209:-88.6441,0,-88.556	0/1:60:32,28:32:1144:28:1008:-72.9746,0,-85.2077	0/1:187:111,76:111:3928:76:2724:-189.11,0,-297.422	0/1:186:104,82:104:3712:82:2903:-205.507,0,-278.291	0/0:107:107,0:107:3777:0:0:0,-32.2102,-340.132	0/0:171:170,0:170:6051:0:0:0,-51.1751,-544.332	0/0:1289:1288,1:1288:46006:1:36:0,-384.429,-4135.37	0/1:106:57,49:57:2036:49:1760:-126.775,0,-151.603	0/0:144:144,0:144:5132:0:0:0,-43.3483,-462.022	0/1:269:156,113:156:5584:113:4039:-282.721,0,-421.706	0/1:96:58,38:58:2084:38:1364:-94.1618,0,-158.931	0/1:94:61,33:61:2170:33:1184:-78.5715,0,-167.264	0/0:145:145,0:145:5207:0:0:0,-43.6493,-468.766	0/0:130:129,0:129:4610:0:0:0,-38.8329,-414.704	0/0:486:486,0:486:17407:0:0:0,-146.301,-1566.25	0/1:292:175,117:175:6264:117:4204:-290.639,0,-475.954	0/0:266:265,0:265:9423:0:0:0,-79.7729,-847.65	0/0:119:118,0:118:4209:0:0:0,-35.5215,-378.631	0/0:62:61,1:61:2184:1:36:0,-15.0656,-193.228	0/0:80:80,0:80:2841:0:0:0,-24.0824,-255.925	0/0:96:96,0:96:3444:0:0:0,-28.8989,-310.168	0/0:478:477,0:477:17035:0:0:0,-143.591,-1532.06	0/0:325:325,0:325:11628:0:0:0,-97.8347,-1046.39	0/0:55:55,0:55:1968:0:0:0,-16.5566,-177.39	0/1:342:171,171:171:6118:171:6094:-445.608,0,-447.765	0/1:189:124,65:124:4429:65:2336:-153.605,0,-341.886	0/1:142:90,52:90:3156:52:1872:-126.013,0,-241.516	0/0:1441:1440,0:1440:51499:0:0:0,-433.483,-4632.72	0/0:1832:1831,1:1831:65440:1:36:0,-547.889,-5883.6	0/0:1257:1255,1:1255:44785:1:36:0,-374.855,-4025.3	0/0:3597:3595,1:3595:128283:1:36:0,-1079.22,-11536.6	0/0:964:940,24:940:33574:24:860:0,-212.471,-2942.89	0/1:281:173,108:173:6187:108:3880:-264.804,0,-472.338	0/1:226:126,99:126:4464:99:3531:-249.906,0,-333.799	0/0:779:778,0:778:27775:0:0:0,-234.201,-2498.52	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	0/0:180:180,0:180:6452:0:0:0,-54.1854,-580.765	0/0:340:340,0:340:12165:0:0:0,-102.35,-1094.7	0/1:157:117,40:117:4188:40:1421:-80.9237,0,-329.84	0/1:99:55,44:55:1968:44:1553:-110.258,0,-147.593	0/1:76:48,28:48:1707:28:1008:-68.1581,0,-131.037	0/0:106:106,0:106:3758:0:0:0,-31.9092,-338.419	0/1:149:86,62:86:3080:62:2224:-155.512,0,-232.516	0/1:189:128,61:128:4561:61:2169:-138.58,0,-353.762	0/1:130:70,60:70:2500:60:2139:-153.643,0,-186.119	0/0:232:232,0:232:8278:0:0:0,-69.839,-745.03	0/1:228:109,119:109:3885:119:4253:-314.313,0,-281.209	0/0:939:923,16:923:33027:16:576:0,-230.492,-2918.9	0/0:197:197,0:197:7056:0:0:0,-59.3029,-635.101	0/0:63:63,0:63:2241:0:0:0,-18.9649,-201.952	0/0:406:399,7:399:14213:7:252:0,-99.1892,-1255.9	0/1:170:114,56:114:4077:56:2011:-130.088,0,-315.94	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:420:411,9:411:14679:9:320:0,-97.2902,-1291.7	0/0:736:717,18:717:25478:18:648:0,-162.965,-2233.67	0/1:169:87,82:87:3128:82:2940:-213.96,0,-230.871	0/0:247:245,2:245:8709:2:72:0,-67.5177,-776.967	0/0:844:843,1:843:30111:1:36:0,-250.471,-2705.49	0/0:193:192,0:192:6853:0:0:0,-57.7978,-616.421	0/1:232:125,107:125:4496:107:3840:-275.956,0,-334.967	0/1:149:79,70:79:2821:70:2491:-179.59,0,-209.274	0/0:125:123,0:123:4344:0:0:0,-37.0267,-390.848	0/1:197:92,105:92:3281:105:3772:-280.375,0,-236.206	0/1:176:61,115:61:2168:115:4099:-316.113,0,-142.406	0/1:253:209,44:209:7472:44:1574:-65.7911,0,-596.362	0/1:104:50,54:50:1792:54:1936:-143.209,0,-130.255	0/1:174:107,67:107:3828:67:2404:-164.237,0,-292.338	0/0:920:920,0:920:32784:0:0:0,-276.948,-2949.54	0/0:237:236,0:236:8402:0:0:0,-71.0431,-755.828	0/1:112:65,47:65:2321:47:1684:-118.132,0,-175.433	0/0:254:254,0:254:9041:0:0:0,-76.4616,-813.673	0/0:185:185,0:185:6598:0:0:0,-55.6905,-593.9	0/1:143:99,44:99:3533:44:1571:-98.6342,0,-275.131	0/1:108:67,40:67:2400:40:1421:-95.6155,0,-183.687	0/0:1708:1707,0:1707:61028:0:0:0,-513.858,-5489.89	0/0:164:163,0:163:5820:0:0:0,-49.0679,-523.632	0/1:127:67,60:67:2377:60:2127:-153.465,0,-175.956	0/1:219:112,107:112:4008:107:3821:-278.16,0,-294.984	0/0:182:182,0:182:6513:0:0:0,-54.7875,-586.252	0/0:144:144,0:144:5140:0:0:0,-43.3483,-462.743	0/0:142:142,0:142:5075:0:0:0,-42.7463,-456.895	0/1:188:109,79:109:3903:79:2813:-196.815,0,-294.867	0/1:44:30,14:30:1067:14:504:-32.4528,0,-83.0959	0/1:121:72,49:72:2575:49:1756:-121.899,0,-195.574	0/0:115:115,0:115:4116:0:0:0,-34.6184,-370.624	0/1:1059:937,122:937:33545:122:4370:-74.6831,0,-2699.19	0/1:342:192,150:192:6858:150:5378:-381.198,0,-514.338	0/1:92:41,51:41:1438:51:1824:-136.746,0,-102.017	0/0:78:78,0:78:2788:0:0:0,-23.4803,-251.148	0/0:155:155,0:155:5508:0:0:0,-46.6596,-495.84
chr02	23419501	.	C	T	674211	PASS	AB=0.625171;ABP=1095.13;AC=145;AF=0.771277;AN=188;AO=28932;CIGAR=1X;DP=32167;DPB=32167;DPRA=0;EPP=57408.7;EPPR=6617.34;GTI=5;LEN=1;MEANALT=1.48936;MQM=59.8051;MQMR=59.9908;NS=94;NUMALT=1;ODDS=2.15969;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1034381;QR=109188;RO=3058;RPL=27989;RPP=54904.2;RPPR=6617.34;RPR=943;RUN=1;SAF=307;SAP=60189.8;SAR=28625;SRF=0;SRP=6643.37;SRR=3058;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:62:0,62:0:0:62:2193:-196.968,-18.6639,0	1/1:438:0,433:0:0:433:15351:-1380.92,-130.346,0	0/1:125:59,66:59:2097:66:2364:-175.248,0,-151.369	1/1:217:0,217:0:0:217:7755:-697.765,-65.3235,0	0/1:71:34,37:34:1201:37:1328:-98.3923,0,-87.0205	0/1:58:27,31:27:972:31:1116:-83.2635,0,-70.3382	0/1:188:77,111:77:2760:111:3950:-299.011,0,-192.048	0/1:190:82,108:82:2921:108:3853:-289.713,0,-205.892	1/1:119:0,119:0:0:119:4244:-381.335,-35.8226,0	1/1:172:0,172:0:0:172:6127:-551.517,-51.7772,0	1/1:1306:0,1296:0:0:1296:46508:-4183.63,-390.135,0	0/1:114:49,65:49:1752:65:2340:-176.271,0,-123.647	1/1:171:0,169:0:0:169:6043:-542.459,-50.8741,0	0/1:275:111,164:111:3968:164:5896:-447.273,0,-274.528	0/1:101:38,62:38:1364:62:2228:-170.203,0,-92.5933	0/1:104:32,72:32:1144:72:2588:-201.54,0,-71.9624	1/1:169:0,169:0:0:169:5991:-538.05,-50.8741,0	1/1:135:0,134:0:0:134:4804:-432.081,-40.338,0	1/1:500:0,489:0:0:489:17530:-1576.14,-147.204,0	0/1:291:114,177:114:4080:177:6328:-481.94,0,-279.787	1/1:267:0,266:0:0:266:9490:-853.536,-80.074,0	1/1:119:0,119:0:0:119:4280:-385.319,-35.8226,0	1/1:61:1,60:1:36:60:2122:-187.619,-14.7646,0	1/1:84:0,84:0:0:84:3016:-271.582,-25.2865,0	1/1:103:0,103:0:0:103:3685:-331.733,-31.0061,0	1/1:480:0,479:0:0:479:17115:-1539.54,-144.193,0	1/1:334:0,334:0:0:334:11950:-1075.14,-100.544,0	1/1:60:0,59:0:0:59:2105:-189.164,-17.7608,0	0/1:343:172,171:172:6137:171:6110:-446.688,0,-449.177	0/1:191:65,126:65:2336:126:4493:-347.014,0,-153.003	0/1:148:53,94:53:1900:94:3384:-260.106,0,-126.667	1/1:1454:0,1452:0:0:1452:51930:-4671.48,-437.096,0	1/1:1843:0,1835:0:0:1835:65419:-5884.93,-552.39,0	1/1:1254:0,1247:0:0:1247:44588:-4010.6,-375.384,0	1/1:3555:0,3528:0:0:3528:125606:-11298.8,-1062.03,0	1/1:947:25,919:25:885:919:32948:-2884.32,-204.565,0	0/1:292:108,184:108:3868:184:6592:-505.212,0,-260.414	0/1:224:98,126:98:3481:126:4524:-339.282,0,-246.071	1/1:802:0,794:0:0:794:28357:-2550.7,-239.018,0	0/1:15:9,6:9:316:6:216:-15.2751,0,-24.2634	1/1:187:0,186:0:0:186:6676:-600.392,-55.9916,0	1/1:345:0,342:0:0:342:12272:-1103.77,-102.952,0	0/1:157:39,118:39:1396:118:4240:-334.516,0,-78.6774	0/1:104:45,58:45:1612:58:2076:-155.66,0,-114.004	0/1:78:28,48:28:1008:48:1696:-129.683,0,-67.7982	1/1:110:0,110:0:0:110:3948:-355.454,-33.1133,0	0/1:153:63,90:63:2252:90:3213:-243.277,0,-156.886	0/1:193:61,132:61:2169:132:4728:-367.523,0,-137.376	0/1:132:60,72:60:2140:72:2592:-193.764,0,-153.132	1/1:240:0,239:0:0:239:8543:-767.873,-71.9462,0	0/1:227:117,110:117:4154:110:3948:-287.12,0,-305.709	1/1:933:14,912:14:500:912:32669:-2893.53,-233.776,0	1/1:205:0,203:0:0:203:7285:-655.28,-61.1091,0	1/1:66:0,66:0:0:66:2364:-212.978,-19.868,0	1/1:410:7,400:7:252:400:14275:-1261.48,-99.8501,0	0/1:170:55,115:55:1957:115:4132:-320.859,0,-125.229	1/1:31:0,31:0:0:31:1116:-100.723,-9.33193,0	1/1:427:9,413:9:320:413:14773:-1300.16,-98.2454,0	1/1:741:18,716:18:640:716:25678:-2252.36,-163.385,0	0/1:169:81,88:81:2896:88:3148:-232.643,0,-210.002	1/1:262:3,257:3:108:257:9198:-817.286,-68.5525,0	1/1:852:0,852:0:0:852:30473:-2741.64,-256.478,0	1/1:194:0,194:0:0:194:6956:-626.015,-58.3998,0	0/1:239:105,134:105:3760:134:4789:-359.123,0,-266.653	0/1:155:71,84:71:2536:84:2985:-222.166,0,-181.832	1/1:127:0,127:0:0:127:4556:-410.139,-38.2308,0	0/1:202:105,96:105:3768:96:3425:-247.511,0,-278.452	0/1:175:115,60:115:4092:60:2133:-139.556,0,-315.786	0/1:257:43,212:43:1521:212:7609:-607.648,0,-60.078	0/1:103:51,52:51:1824:52:1856:-136.314,0,-133.435	0/1:179:64,114:64:2288:114:4077:-312.997,0,-152.239	1/1:933:0,921:0:0:921:32962:-2965.17,-277.249,0	1/1:238:0,238:0:0:238:8520:-766.8,-71.6451,0	0/1:115:48,67:48:1724:67:2385:-180.231,0,-120.827	1/1:262:0,260:0:0:260:9292:-835.794,-78.2678,0	1/1:194:0,194:0:0:194:6941:-624.534,-58.3998,0	0/1:147:42,105:42:1500:105:3756:-293.875,0,-91.0432	0/1:111:40,69:40:1436:69:2476:-189.78,0,-96.3656	1/1:1692:0,1686:0:0:1686:60224:-5417.62,-507.537,0	1/1:171:0,170:0:0:170:6101:-548.686,-51.1751,0	0/1:130:60,70:60:2133:70:2516:-187.501,0,-153.103	0/1:222:105,116:105:3739:116:4160:-307.666,0,-269.824	1/1:193:0,190:0:0:190:6817:-612.868,-57.1957,0	1/1:149:0,144:0:0:144:5168:-464.649,-43.3483,0	1/1:164:0,164:0:0:164:5859:-526.271,-49.3689,0	0/1:198:81,114:81:2892:114:4073:-307.434,0,-201.456	0/1:44:11,31:11:396:31:1104:-86.5302,0,-22.9797	0/1:120:47,72:47:1684:72:2548:-193.265,0,-115.665	1/1:126:0,124:0:0:124:4429:-398.162,-37.3277,0	0/1:1070:118,947:118:4215:947:34004:-2737.88,0,-58.5741	0/1:351:148,200:148:5279:200:7157:-538.886,0,-370.126	0/1:94:50,43:50:1779:43:1544:-110.779,0,-132.037	1/1:77:0,77:0:0:77:2732:-246.083,-23.1793,0	1/1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chr02	23484294	.	CAGGC	TAGGC,TAGGT	319029	PASS	AB=0.537706,0.458063;ABP=84.7239,104.094;AC=139,49;AF=0.739362,0.260638;AN=188;AO=9705,3045;CIGAR=1X4M,1X3M1X;DP=12806;DPB=12806;DPRA=19.6605,1.03999;EPP=10032.1,3247.52;EPPR=5.18177;GTI=1;LEN=1,5;MEANALT=2.08602,2.53846;MQM=59.4146,48.9061;MQMR=60;NS=94;NUMALT=2;ODDS=1.41222;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=347015,106949;QR=36;RO=1;RPL=8200,2589;RPP=10032.1,3247.52;RPPR=5.18177;RPR=1505,456;RUN=1,1;SAF=9705,3045;SAP=21077.2,6615.14;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:45:0,45,0:0:0:45,0:1595,0:-143.831,-13.5464,0,-143.831,-13.5464,-143.831	1/1:207:0,205,0:0:0:205,0:7343,0:-660.311,-61.7112,0,-660.311,-61.7112,-660.311	1/2:167:0,77,89:0:0:77,89:2748,3121:-476.191,-252.411,-229.231,-223.932,0,-197.14	1/1:413:0,412,0:0:0:412,0:14771,0:-1328.29,-124.024,0,-1328.29,-124.024,-1328.29	1/2:93:0,54,39:0:0:54,39:1926,1383:-268.58,-111.958,-95.7021,-156.975,0,-145.235	1/2:75:0,37,38:0:0:37,38:1328,1323:-215.705,-107.386,-96.2481,-108.672,0,-97.2326	1/2:227:0,123,102:0:0:123,102:4391,3605:-647.793,-289.958,-252.931,-357.86,0,-327.155	1/2:200:0,121,79:0:0:121,79:4336,2799:-580.614,-227.076,-190.651,-353.893,0,-330.111	1/1:130:0,129,0:0:0:129,0:4604,0:-414.046,-38.8329,0,-414.046,-38.8329,-414.046	1/1:137:0,135,0:0:0:135,0:4803,0:-431.884,-40.6391,0,-431.884,-40.6391,-431.884	1/1:98:0,97,0:0:0:97,0:3488,0:-313.676,-29.1999,0,-313.676,-29.1999,-313.676	1/2:90:0,45,45:0:0:45,45:1603,1568:-256.297,-125.689,-112.143,-130.958,0,-117.411	1/1:104:0,104,0:0:0:104,0:3732,0:-336.038,-31.3071,0,-336.038,-31.3071,-336.038	1/2:77:0,42,35:0:0:42,35:1495,1205:-218.906,-97.1688,-84.5255,-122.085,0,-111.549	1/2:89:0,47,42:0:0:47,42:1684,1476:-255.435,-118.097,-103.949,-137.689,0,-125.046	1/2:82:0,41,40:0:0:41,40:1470,1413:-232.964,-113.392,-101.05,-119.568,0,-107.527	1/1:86:0,86,0:0:0:86,0:3088,0:-278.115,-25.8886,0,-278.115,-25.8886,-278.115	1/1:95:0,95,0:0:0:95,0:3388,0:-305.062,-28.5979,0,-305.062,-28.5979,-305.062	1/1:67:0,67,0:0:0:67,0:2406,0:-216.493,-20.169,0,-216.493,-20.169,-216.493	1/2:378:0,225,150:0:0:225,150:8068,5244:-1077.88,-419.989,-352.258,-658.019,0,-612.865	1/1:272:0,271,0:0:0:271,0:9673,0:-869.673,-81.5791,0,-869.673,-81.5791,-869.673	1/1:130:0,130,0:0:0:130,0:4664,0:-419.915,-39.1339,0,-419.915,-39.1339,-419.915	1/1:104:0,103,0:0:0:103,0:3679,0:-330.907,-31.0061,0,-330.907,-31.0061,-330.907	1/1:170:0,169,0:0:0:169,0:6004,0:-539.833,-50.8741,0,-539.833,-50.8741,-539.833	1/1:120:0,119,0:0:0:119,0:4228,0:-379.876,-35.8226,0,-379.876,-35.8226,-379.876	1/1:483:0,481,0:0:0:481,0:17217,0:-1548.66,-144.795,0,-1548.66,-144.795,-1548.66	1/1:373:0,370,0:0:0:370,0:13234,0:-1189.91,-111.381,0,-1189.91,-111.381,-1189.91	1/1:40:0,40,0:0:0:40,0:1436,0:-129.479,-12.0412,0,-129.479,-12.0412,-129.479	1/2:467:0,296,168:0:0:296,168:10605,5896:-1344.09,-479.201,-390.096,-864.903,0,-814.33	1/2:134:0,74,59:0:0:74,59:2640,2104:-384.192,-169.011,-146.734,-215.244,0,-197.484	1/2:128:0,67,61:0:0:67,61:2387,2147:-367.001,-172.543,-152.374,-194.81,0,-176.447	1/1:17:0,17,0:0:0:17,0:612,0:-55.3849,-5.11751,0,-55.3849,-5.11751,-55.3849	1/1:21:0,21,0:0:0:21,0:756,0:-68.3388,-6.32163,0,-68.3388,-6.32163,-68.3388	1/1:5:0,5,0:0:0:5,0:176,0:-16.185,-1.50515,0,-16.185,-1.50515,-16.185	1/1:14:0,14,0:0:0:14,0:504,0:-45.6981,-4.21442,0,-45.6981,-4.21442,-45.6981	1/2:11:0,8,3:0:0:8,3:284,102:-31.7377,-8.59426,-6.18602,-23.4869,0,-22.5838	1/2:275:0,154,119:0:0:154,119:5516,4187:-789.753,-340.217,-293.859,-449.535,0,-413.713	1/2:284:0,167,115:0:0:167,115:5982,3963:-804.209,-316.639,-266.367,-487.579,0,-452.96	1/1:89:0,89,0:0:0:89,0:3192,0:-287.495,-26.7917,0,-287.495,-26.7917,-287.495	2/2:7:0,0,7:0:0:0,7:0,251:-22.7081,-22.7081,-22.7081,-2.10721,-2.10721,0	1/1:396:0,395,0:0:0:395,0:14120,0:-1269.07,-118.907,0,-1269.07,-118.907,-1269.07	1/1:53:0,53,0:0:0:53,0:1908,0:-171.884,-15.9546,0,-171.884,-15.9546,-171.884	1/2:237:0,143,91:0:0:143,91:5101,3195:-671.93,-256.465,-213.418,-415.505,0,-388.111	1/2:87:0,45,42:0:0:45,42:1618,1483:-251.278,-119.539,-105.992,-132.093,0,-119.45	1/2:85:0,44,41:0:0:44,41:1571,1449:-245.288,-117.257,-104.012,-128.384,0,-116.042	1/1:77:0,76,0:0:0:76,0:2712,0:-243.961,-22.8783,0,-243.961,-22.8783,-243.961	1/2:166:0,79,86:0:0:79,86:2811,3005:-471.91,-242.822,-219.041,-229.101,0,-203.212	1/2:214:0,115,98:0:0:115,98:4113,3432:-610.439,-275.57,-240.951,-334.863,0,-305.362	1/2:145:0,83,62:0:0:83,62:2964,2187:-417.535,-176.144,-151.159,-241.743,0,-223.079	1/1:170:0,168,0:0:0:168,0:5994,0:-538.711,-50.573,0,-538.711,-50.573,-538.711	1/2:227:0,114,113:0:0:114,113:4066,3968:-653.846,-322.435,-288.117,-331.765,0,-297.748	1/2:11:0,6,5:0:0:6,5:216,174:-31.9641,-14.3769,-12.5707,-17.9387,0,-16.4336	1/1:212:0,212,0:0:0:212,0:7578,0:-681.655,-63.8184,0,-681.655,-63.8184,-681.655	1/1:37:0,37,0:0:0:37,0:1324,0:-119.458,-11.1381,0,-119.458,-11.1381,-119.458	1/2:22:0,14,8:0:0:14,8:482,281:-62.3047,-23.1611,-18.9467,-39.4916,0,-37.0834	1/2:203:0,101,102:0:0:101,102:35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chr02	23534408	.	A	C	227565	PASS	AB=0.579881;ABP=384.273;AC=141;AF=0.75;AN=188;AO=10798;CIGAR=1X;DP=13700;DPB=13700;DPRA=0;EPP=23277.2;EPPR=6187.8;GTI=2;LEN=1;MEANALT=1.06383;MQM=59.9808;MQMR=59.9803;NS=94;NUMALT=1;ODDS=1.79885;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=383953;QR=103898;RO=2896;RPL=20;RPP=23277.2;RPPR=6187.8;RPR=10778;RUN=1;SAF=10798;SAP=23450.6;SAR=0;SRF=2896;SRP=6291.59;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:38:0,38:0:0:38:1341:-120.989,-11.4391,0	1/1:234:1,233:1:36:233:8296:-743.01,-66.8427,0	0/1:166:64,102:64:2284:102:3599:-274.147,0,-155.851	1/1:319:3,316:3:104:316:11249:-1002.6,-86.3258,0	0/1:110:31,79:31:1116:79:2819:-220.836,0,-67.6384	0/1:56:22,34:22:784:34:1212:-92.5286,0,-54.0262	0/1:154:58,96:58:2088:96:3402:-260.038,0,-141.831	0/1:237:125,112:125:4484:112:3965:-285.696,0,-332.384	1/1:90:0,90:0:0:90:3182:-286.606,-27.0927,0	1/1:159:1,158:1:36:158:5605:-500.978,-44.2655,0	1/1:140:0,140:0:0:140:5004:-450.508,-42.1442,0	0/1:101:45,55:45:1620:55:1968:-146.932,0,-115.627	1/1:175:0,175:0:0:175:6235:-561.247,-52.6803,0	0/1:148:77,71:77:2768:71:2503:-180.969,0,-204.808	0/1:94:44,50:44:1584:50:1800:-133.985,0,-114.555	0/1:66:28,38:28:1004:38:1360:-102.833,0,-70.8079	1/1:114:0,114:0:0:114:4044:-364.149,-34.3174,0	1/1:105:0,105:0:0:105:3780:-340.397,-31.6082,0	1/1:89:0,89:0:0:89:3156:-284.267,-26.7917,0	0/1:303:109,194:109:3916:194:6903:-530.128,0,-261.42	1/1:229:0,229:0:0:229:8135:-732.171,-68.9359,0	1/1:132:0,132:0:0:132:4670:-420.465,-39.736,0	1/1:52:0,52:0:0:52:1847:-166.509,-15.6536,0	1/1:102:0,102:0:0:102:3617:-325.734,-30.7051,0	1/1:124:2,122:2:72:122:4353:-385.107,-30.491,0	1/1:474:1,473:1:36:473:16800:-1508.07,-139.09,0	1/1:415:0,415:0:0:415:14753:-1327.47,-124.927,0	1/1:56:0,56:0:0:56:1986:-179.013,-16.8577,0	0/1:381:97,284:97:3488:284:10117:-795.773,0,-199.437	0/1:210:85,124:85:3052:124:4407:-333.527,0,-211.634	0/1:132:58,74:58:2065:74:2644:-198.34,0,-146.37	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:28:0,28:0:0:28:965:-87.1588,-8.42884,0	0/1:24:11,13:11:396:13:468:-35.2349,0,-28.758	0/1:243:101,142:101:3624:142:5070:-383.294,0,-253.214	0/1:208:92,115:92:3296:115:4100:-306.514,0,-234.181	1/1:135:0,135:0:0:135:4803:-432.427,-40.6391,0	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	1/1:178:0,177:0:0:177:6325:-568.982,-53.2823,0	1/1:74:0,74:0:0:74:2626:-236.586,-22.2762,0	0/1:149:53,96:53:1908:96:3416:-262.802,0,-127.144	0/1:86:49,37:49:1764:37:1320:-93.2134,0,-133.155	0/1:83:35,48:35:1256:48:1713:-129.468,0,-88.3598	1/1:109:0,109:0:0:109:3887:-350.025,-32.8123,0	0/1:203:89,114:89:3204:114:4045:-303.13,0,-227.473	0/1:286:92,194:92:3281:194:6892:-534.257,0,-209.414	0/1:185:85,100:85:3060:100:3529:-261.86,0,-219.937	1/1:299:0,299:0:0:299:10616:-955.359,-90.008,0	0/1:217:98,119:98:3516:119:4226:-315.198,0,-251.326	0/1:13:2,11:2:72:11:396:-32.0694,0,-2.92333	1/1:233:0,233:0:0:233:8299:-746.792,-70.14,0	1/1:96:0,96:0:0:96:3384:-304.774,-28.8989,0	0/1:29:17,12:17:608:12:417:-29.1317,0,-46.3222	0/1:172:69,103:69:2480:103:3649:-276.838,0,-171.676	1/1:44:0,44:0:0:44:1567:-141.321,-13.2453,0	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:33:10,23:10:360:23:828:-64.9101,0,-22.8103	0/1:94:40,54:40:1436:54:1923:-145.049,0,-101.241	1/1:188:0,188:0:0:188:6690:-602.178,-56.5936,0	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	1/1:354:0,354:0:0:354:12594:-1133.28,-106.565,0	0/1:296:103,192:103:3700:192:6803:-523.181,0,-244.037	0/1:120:48,72:48:1724:72:2567:-195.156,0,-119.322	1/1:154:0,154:0:0:154:5471:-492.52,-46.3586,0	0/1:209:94,115:94:3372:115:4088:-305.191,0,-240.78	0/1:124:61,62:61:2196:62:2174:-158.537,0,-160.519	0/1:65:24,41:24:864:41:1467:-112.758,0,-58.5156	0/1:109:66,43:66:2356:43:1535:-105.63,0,-179.169	0/1:143:74,69:74:2648:69:2468:-179.327,0,-195.519	1/1:64:0,64:0:0:64:2278:-205.282,-19.2659,0	1/1:215:0,215:0:0:215:7634:-687.095,-64.7215,0	0/1:136:39,97:39:1400:97:3459:-270.583,0,-85.3591	1/1:253:0,253:0:0:253:8963:-806.392,-76.1606,0	1/1:286:1,285:1:36:285:10109:-906.152,-82.4963,0	0/1:201:95,106:95:3388:106:3783:-280.154,0,-244.629	0/1:199:80,119:80:2860:119:4208:-318.998,0,-197.733	1/1:18:0,18:0:0:18:635:-57.477,-5.41854,0	1/1:200:0,200:0:0:200:7132:-641.939,-60.206,0	0/1:145:58,87:58:2088:87:3073:-233.15,0,-144.54	0/1:307:141,166:141:5064:166:5906:-439.237,0,-363.487	1/1:169:0,169:0:0:169:6042:-543.883,-50.8741,0	1/1:108:0,108:0:0:108:3833:-345.168,-32.5112,0	1/1:114:1,113:1:36:113:4018:-358.212,-30.7191,0	0/1:143:74,69:74:2656:69:2472:-179.686,0,-196.238	0/1:35:18,17:18:648:17:612:-44.8774,0,-48.1158	0/1:98:47,51:47:1692:51:1808:-133.5,0,-123.045	1/1:97:0,97:0:0:97:3449:-310.62,-29.1999,0	0/1:128:61,67:61:2179:67:2395:-177.274,0,-157.844	0/1:169:73,96:73:2609:96:3428:-257.859,0,-184.182	0/1:63:40,23:40:1440:23:824:-55.5184,0,-110.933	1/1:144:0,144:0:0:144:5123:-461.212,-43.3483,0	1/1:147:1,146:1:36:146:5188:-463.462,-40.6531,0
chr02	23534414	.	G	A	47787.4	PASS	AB=0.421778;ABP=369.563;AC=47;AF=0.25;AN=188;AO=2919;CIGAR=1X;DP=13671;DPB=13671;DPRA=1.26043;EPP=6007.31;EPPR=22027.6;GTI=2;LEN=1;MEANALT=1.05455;MQM=59.9805;MQMR=59.9959;NS=94;NUMALT=1;ODDS=0.902575;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104601;QR=384302;RO=10746;RPL=39;RPP=6007.31;RPPR=22027.6;RPR=2880;RUN=1;SAF=2919;SAP=6341.54;SAR=0;SRF=10746;SRP=23337.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:235:235,0:235:8413:0:0:0,-70.742,-757.153	0/1:168:104,64:104:3713:64:2304:-157.047,0,-283.798	0/0:312:310,2:310:11068:2:72:0,-87.0846,-989.178	0/1:112:80,32:80:2833:32:1148:-69.9145,0,-221.491	0/1:56:34,22:34:1216:22:788:-54.3871,0,-92.8889	0/1:154:95,59:95:3384:59:2124:-145.07,0,-258.416	0/1:238:111,127:111:3968:127:4555:-338.47,0,-285.666	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/0:161:161,0:161:5753:0:0:0,-48.4658,-517.885	0/0:136:136,0:136:4875:0:0:0,-40.9401,-438.901	0/1:105:57,48:57:2039:48:1716:-123.117,0,-152.173	0/0:179:179,0:179:6415:0:0:0,-53.8844,-577.436	0/1:144:68,76:68:2448:76:2713:-201.064,0,-177.226	0/1:94:50,44:50:1788:44:1584:-114.555,0,-132.906	0/1:65:37,28:37:1332:28:1008:-71.4694,0,-100.615	0/0:115:115,0:115:4128:0:0:0,-34.6184,-371.703	0/0:106:106,0:106:3793:0:0:0,-31.9092,-341.566	0/0:90:90,0:90:3240:0:0:0,-27.0927,-291.82	0/1:304:194,110:194:6968:110:3952:-264.357,0,-535.668	0/0:223:223,0:223:7968:0:0:0,-67.1297,-717.142	0/0:130:130,0:130:4644:0:0:0,-39.1339,-418.124	0/0:53:53,0:53:1887:0:0:0,-15.9546,-170.108	0/0:104:104,0:104:3728:0:0:0,-31.3071,-335.721	0/0:121:119,2:119:4247:2:72:0,-29.5879,-375.573	0/0:463:463,0:463:16562:0:0:0,-139.377,-1490.24	0/0:414:413,1:413:14776:1:36:0,-121.028,-1325.98	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.278	0/1:378:280,98:280:10036:98:3506:-201.961,0,-789.384	0/1:208:124,84:124:4456:84:3005:-208.066,0,-338.594	0/1:135:75,59:75:2675:59:2108:-149.383,0,-200.391	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:24:13,11:13:468:11:392:-28.3953,0,-35.2349	0/1:244:143,101:143:5105:101:3631:-253.542,0,-386.142	0/1:203:111,92:111:3988:92:3308:-236.827,0,-298	0/0:133:133,0:133:4767:0:0:0,-40.037,-429.186	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/0:181:181,0:181:6492:0:0:0,-54.4864,-584.363	0/0:73:73,0:73:2597:0:0:0,-21.9752,-233.977	0/1:151:97,54:97:3453:54:1927:-128.251,0,-265.527	0/1:86:38,48:38:1338:48:1724:-129.557,0,-94.8274	0/1:83:47,36:47:1688:36:1296:-91.9584,0,-127.221	0/0:108:108,0:108:3849:0:0:0,-32.5112,-346.606	0/1:201:113,88:113:4052:88:3156:-223.758,0,-304.36	0/1:287:191,96:191:6791:96:3444:-223.777,0,-524.867	0/1:183:99,84:99:3552:84:2985:-213.792,0,-264.799	0/0:294:293,1:293:10482:1:36:0,-84.9045,-939.696	0/1:216:117,99:117:4158:99:3540:-253.786,0,-309.38	0/1:14:11,3:11:396:3:108:-5.86075,0,-31.7683	0/0:236:236,0:236:8445:0:0:0,-71.0431,-759.681	0/0:95:95,0:95:3408:0:0:0,-28.5978,-306.934	0/1:30:13,17:13:464:17:612:-46.3825,0,-33.0666	0/1:169:100,69:100:3546:69:2472:-171.86,0,-268.474	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:36:26,10:26:913:10:345:-20.5437,0,-71.6469	0/1:97:56,41:56:1997:41:1465:-102.945,0,-150.802	0/0:187:187,0:187:6720:0:0:0,-56.2926,-604.872	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:353:352,1:352:12559:1:36:0,-102.665,-1126.54	0/1:295:191,104:191:6837:104:3738:-247.815,0,-526.594	0/1:121:73,48:73:2628:48:1724:-119.021,0,-200.342	0/0:157:157,0:157:5591:0:0:0,-47.2617,-503.31	0/1:211:115,96:115:4082:96:3418:-244.317,0,-304.048	0/1:124:62,61:62:2217:61:2192:-160.159,0,-162.406	0/1:67:42,25:42:1508:25:900:-61.152,0,-115.846	0/1:108:42,66:42:1489:66:2349:-179.119,0,-101.791	0/1:145:70,75:70:2516:75:2696:-199.234,0,-183.042	0/0:63:63,0:63:2251:0:0:0,-18.9649,-202.853	0/0:204:204,0:204:7274:0:0:0,-61.4101,-654.712	0/1:135:94,40:94:3372:40:1436:-88.8398,0,-262.998	0/0:251:250,0:250:8969:0:0:0,-75.2575,-806.826	0/0:289:289,0:289:10326:0:0:0,-86.9977,-929.263	0/1:200:105,95:105:3748:95:3401:-246.098,0,-277.315	0/1:204:124,80:124:4425:80:2843:-194.697,0,-337.011	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:196:194,0:194:6945:0:0:0,-58.3998,-624.754	0/1:146:88,58:88:3144:58:2082:-143.7,0,-239.236	0/1:313:170,143:170:6073:143:5127:-367.348,0,-452.45	0/0:169:169,0:169:6064:0:0:0,-50.8741,-545.861	0/0:108:108,0:108:3850:0:0:0,-32.5112,-346.694	0/0:118:117,1:117:4192:1:36:0,-31.9233,-373.863	0/1:143:69,74:69:2484:74:2658:-196.418,0,-180.765	0/1:36:18,18:18:640:18:644:-47.4535,0,-47.0922	0/1:97:49,48:49:1748:48:1721:-125.954,0,-128.404	0/0:96:95,1:95:3390:1:36:0,-25.3006,-301.716	0/1:129:67,62:67:2389:62:2222:-161.411,0,-176.433	0/1:167:94,73:94:3333:73:2626:-186.315,0,-249.914	0/1:65:25,40:25:900:40:1440:-110.331,0,-61.7541	0/0:143:143,0:143:5132:0:0:0,-43.0473,-462.02	0/0:144:143,1:143:5124:1:36:0,-39.75,-457.703
chr02	23797915	.	T	C	135797	PASS	AB=0.503433;ABP=3.51721;AC=140;AF=0.744681;AN=188;AO=6538;CIGAR=1X;DP=9000;DPB=9000;DPRA=0;EPP=14148;EPPR=5236.77;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9786;MQMR=59.9988;NS=94;NUMALT=1;ODDS=0.902184;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233238;QR=85747;RO=2458;RPL=6533;RPP=14156.7;RPPR=5236.77;RPR=5;RUN=1;SAF=1;SAP=14191.4;SAR=6537;SRF=0;SRP=5340.49;SRR=2458;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:48:0,48:0:0:48:1707:-153.915,-14.4494,0	1/1:169:0,169:0:0:169:6044:-544.064,-50.8741,0	0/1:276:107,169:107:3781:169:6043:-460.888,0,-257.407	1/1:223:0,223:0:0:223:7956:-716.065,-67.1297,0	0/1:56:26,29:26:894:29:1040:-76.9979,0,-63.8533	0/1:35:17,18:17:577:18:644:-47.7545,0,-41.713	0/1:174:88,86:88:3113:86:3076:-224.689,0,-228.019	0/1:184:92,92:92:3222:92:3281:-240.118,0,-234.815	1/1:102:0,102:0:0:102:3644:-328.161,-30.7051,0	1/1:115:0,115:0:0:115:4057:-365.315,-34.6185,0	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	0/1:49:23,26:23:824:26:916:-68.0054,0,-59.7328	1/1:58:0,58:0:0:58:2080:-187.47,-17.4597,0	0/1:52:25,27:25:896:27:960:-71.048,0,-65.3068	0/1:63:30,33:30:1041:33:1184:-87.9034,0,-75.0325	0/1:37:18,19:18:636:19:667:-49.2165,0,-46.4299	1/1:61:0,61:0:0:61:2170:-195.565,-18.3628,0	1/1:44:0,44:0:0:44:1571:-141.681,-13.2453,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	0/1:162:71,91:71:2491:91:3248:-243.761,0,-175.673	1/1:114:0,114:0:0:114:4031:-362.98,-34.3174,0	1/1:157:0,157:0:0:157:5591:-503.043,-47.2617,0	1/1:62:0,62:0:0:62:2208:-198.985,-18.6639,0	1/1:70:0,70:0:0:70:2488:-224.173,-21.0721,0	1/1:135:0,135:0:0:135:4822:-434.134,-40.6391,0	1/1:369:0,369:0:0:369:13155:-1183.76,-111.08,0	1/1:160:0,160:0:0:160:5702:-513.295,-48.1648,0	1/1:33:0,33:0:0:33:1188:-107.229,-9.93399,0	0/1:346:212,134:212:7268:134:4775:-325.752,0,-550.03	0/1:119:58,61:58:2030:61:2184:-161.003,0,-147.147	0/1:105:61,44:61:2134:44:1569:-109.892,0,-160.717	1/1:11:0,11:0:0:11:384:-34.8947,-3.31133,0	1/1:20:0,20:0:0:20:705:-63.7728,-6.0206,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:4:0,3:0:0:3:108:-9.71534,-0.90309,0	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/1:147:83,64:83:2907:64:2296:-162.65,0,-217.613	0/1:237:106,130:106:3625:130:4583:-341.393,0,-255.217	1/1:52:0,52:0:0:52:1860:-167.676,-15.6536,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:115:0,115:0:0:115:4128:-371.703,-34.6185,0	1/1:31:0,31:0:0:31:1108:-100.031,-9.33193,0	0/1:180:82,98:82:2783:98:3451:-256.618,0,-196.522	0/1:66:31,35:31:1073:35:1252:-93.1171,0,-77.0079	0/1:41:22,19:22:769:19:680:-49.1869,0,-57.1864	1/1:106:0,106:0:0:106:3773:-339.769,-31.9092,0	0/1:74:37,37:37:1305:37:1315:-96.3748,0,-95.4732	0/1:234:125,109:125:4341:109:3908:-281.472,0,-320.429	0/1:132:72,60:72:2535:60:2137:-152.86,0,-188.661	1/1:139:0,139:0:0:139:4971:-447.539,-41.8432,0	0/1:124:53,71:53:1892:71:2548:-192.243,0,-133.231	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	1/1:154:0,154:0:0:154:5524:-497.284,-46.3586,0	1/1:39:0,39:0:0:39:1384:-124.859,-11.7402,0	0/1:17:5,12:5:161:12:432:-34.1037,0,-9.68905	0/1:114:49,65:49:1672:65:2311:-173.933,0,-116.441	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	0/1:5:1,4:1:36:4:140:-11.4394,0,-2.09312	0/1:14:2,12:2:72:12:423:-34.1897,0,-2.6223	0/1:77:29,47:29:1024:47:1673:-127.617,0,-69.2347	1/1:91:0,91:0:0:91:3251:-292.811,-27.3937,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:182:0,182:0:0:182:6524:-587.242,-54.7875,0	0/1:184:89,95:89:3146:95:3408:-251.544,0,-227.975	0/1:56:20,36:20:712:36:1288:-99.3659,0,-47.549	1/1:101:0,101:0:0:101:3598:-324.025,-30.404,0	0/1:197:103,94:103:3539:94:3352:-242.595,0,-259.416	0/1:142:100,42:100:3411:42:1512:-93.6284,0,-264.46	0/1:12:6,6:6:204:6:216:-16.1782,0,-15.081	0/1:99:51,48:51:1801:48:1688:-122.401,0,-132.568	0/1:50:20,30:20:682:30:1068:-81.3806,0,-46.6432	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:119:0,119:0:0:119:4252:-382.86,-35.8226,0	0/1:49:15,34:15:521:34:1203:-93.8246,0,-32.4659	1/1:104:0,104:0:0:104:3682:-331.423,-31.3071,0	1/1:161:0,161:0:0:161:5776:-519.953,-48.4658,0	0/1:161:71,90:71:2460:90:3201:-239.846,0,-173.185	0/1:118:64,54:64:2265:54:1924:-137.912,0,-168.59	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	1/1:120:1,119:1:36:119:4257:-379.708,-32.5253,0	0/1:96:39,57:39:1366:57:2040:-154.973,0,-94.3355	0/1:275:152,123:152:5361:123:4394:-312.849,0,-399.839	1/1:78:0,78:0:0:78:2769:-249.451,-23.4803,0	1/1:37:0,37:0:0:37:1322:-119.282,-11.1381,0	1/1:70:0,70:0:0:70:2500:-225.253,-21.0721,0	0/1:125:61,64:61:2134:64:2291:-168.822,0,-154.697	0/1:26:15,11:15:528:11:396:-28.156,0,-40.0246	0/1:72:36,36:36:1276:36:1292:-94.9096,0,-93.4689	1/1:51:0,51:0:0:51:1823:-164.35,-15.3525,0	0/1:26:15,11:15:540:11:396:-28.156,0,-41.1098	0/1:68:27,41:27:951:41:1468:-111.946,0,-65.4343	0/1:55:37,18:37:1316:18:627:-40.1977,0,-102.185	1/1:79:1,78:1:36:78:2765:-245.493,-20.1831,0	1/1:101:0,101:0:0:101:3612:-325.286,-30.404,0
chr02	24105481	.	A	T	61674.9	PASS	AB=0.240035;ABP=15333.9;AC=90;AF=0.478723;AN=188;AO=6282;CIGAR=1X;DP=26311;DPB=26311;DPRA=40.8339;EPP=13566.1;EPPR=43298;GTI=28;LEN=1;MEANALT=1.07609;MQM=59.9163;MQMR=59.9073;NS=94;NUMALT=1;ODDS=0.084073;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=224669;QR=717142;RO=20022;RPL=9;RPP=13566.1;RPPR=43298;RPR=6273;RUN=1;SAF=6282;SAP=13644.2;SAR=0;SRF=20022;SRP=43480.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:108:81,27:81:2901:27:968:-54.9261,0,-228.795	0/1:477:364,113:364:13047:113:4052:-221.275,0,-1030.44	0/1:312:263,49:263:9362:49:1737:-62.6775,0,-748.349	0/1:669:490,179:490:17567:179:6405:-375.092,0,-1379.24	0/1:138:121,17:121:4352:17:608:-13.5099,0,-350.309	0/1:134:118,16:118:4228:16:576:-11.837,0,-340.362	0/1:502:421,81:421:15061:81:2885:-108.768,0,-1203.26	0/1:314:209,105:209:7501:105:3765:-244.511,0,-580.595	0/1:304:217,87:217:7778:87:3109:-188.522,0,-608.521	0/1:360:283,77:283:10120:77:2757:-139.999,0,-802.354	0/1:152:125,27:125:4449:27:964:-41.3193,0,-354.822	0/1:171:147,24:147:5288:24:860:-26.2457,0,-424.573	0/1:230:182,48:182:6548:48:1724:-86.2085,0,-519.723	0/1:124:103,21:103:3704:21:756:-31.0395,0,-296.233	0/1:197:170,27:170:6116:27:957:-27.141,0,-491.143	0/1:144:124,20:124:4456:20:720:-21.7805,0,-357.843	0/1:185:130,54:130:4676:54:1940:-119.127,0,-365.249	0/1:206:185,20:185:6630:20:716:-2.69684,0,-534.697	0/1:148:107,41:107:3852:41:1476:-88.5837,0,-302.321	0/1:664:548,116:548:19648:116:4149:-173.708,0,-1567.8	0/1:506:426,80:426:15240:80:2853:-104.458,0,-1217.86	0/1:546:430,116:430:15370:116:4164:-210.575,0,-1218.49	0/1:289:189,100:189:6754:100:3592:-236.483,0,-520.889	0/1:418:303,115:303:10836:115:4081:-241.513,0,-848.655	0/1:237:189,48:189:6773:48:1709:-82.7451,0,-538.283	0/1:1199:911,288:911:32659:288:10300:-565.968,0,-2576.62	0/1:407:301,106:301:10792:106:3808:-220.397,0,-847.862	0/1:134:105,29:105:3772:29:1044:-53.9368,0,-299.304	0/1:558:466,92:466:16723:92:3304:-129.603,0,-1336.72	0/1:253:218,35:218:7763:35:1256:-37.1813,0,-622.53	0/1:274:219,55:219:7827:55:1980:-95.9922,0,-621.972	0/1:18:9,9:9:324:9:324:-24.0873,0,-24.0873	0/1:48:39,9:39:1389:9:305:-13.3278,0,-110.857	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	0/1:544:361,183:361:12919:183:6549:-425.665,0,-998.759	0/1:583:375,208:375:13429:208:7423:-492.185,0,-1032.75	0/1:222:164,58:164:5900:58:2088:-121.361,0,-464.268	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:390:303,86:303:10847:86:3077:-159.775,0,-858.101	0/1:153:116,37:116:4176:37:1328:-73.7646,0,-329.954	0/1:382:315,67:315:11240:67:2408:-101.983,0,-896.345	0/1:181:147,34:147:5276:34:1224:-55.9806,0,-420.488	0/1:181:150,31:150:5381:31:1112:-45.9049,0,-429.932	0/1:412:313,99:313:11197:99:3539:-194.647,0,-883.49	0/1:247:213,34:213:7637:34:1224:-36.1126,0,-612.988	0/1:427:258,169:258:9254:169:6045:-415.575,0,-704.271	0/1:324:222,102:222:7947:102:3591:-225.86,0,-617.389	0/1:365:262,103:262:9379:103:3688:-222.24,0,-734.191	0/1:584:400,184:400:14327:184:6562:-414.858,0,-1113.31	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	0/1:552:408,143:408:14630:143:5132:-295.777,0,-1150.17	0/1:99:89,10:89:3166:10:360:-2.94233,0,-255.231	0/0:23:21,2:21:737:2:72:0,-0.0869673,-59.8139	0/1:382:310,72:310:11125:72:2558:-115.445,0,-885.946	0/1:191:134,57:134:4816:57:2044:-126.735,0,-375.599	0/1:13:9,4:9:324:4:144:-9.40023,0,-25.5925	0/1:44:27,17:27:972:17:612:-42.1681,0,-74.548	0/1:203:180,23:180:6449:23:828:-13.735,0,-519.382	0/1:343:262,80:262:9405:80:2856:-153.964,0,-743.09	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:477:344,133:344:12271:133:4761:-285.051,0,-960.565	0/1:548:456,92:456:16306:92:3300:-132.253,0,-1302.23	0/1:192:134,58:134:4786:58:2080:-129.668,0,-373.096	0/1:282:230,52:230:8226:52:1845:-81.4373,0,-655.449	0/1:470:382,88:382:13625:88:3141:-141.424,0,-1084.36	0/1:292:177,115:177:6349:115:4140:-284.876,0,-483.555	0/1:51:41,10:41:1472:10:360:-17.3918,0,-117.415	0/1:174:107,67:107:3836:67:2384:-162.439,0,-293.046	0/1:209:174,35:174:6260:35:1234:-48.4457,0,-500.575	0/1:54:42,12:42:1512:12:428:-22.6032,0,-120.101	0/1:393:292,101:292:10449:101:3602:-206.061,0,-822.013	0/0:157:146,11:146:5229:11:396:0,-11.279,-434.761	0/1:459:319,140:319:11419:140:4991:-311.012,0,-889.404	0/1:582:437,145:437:15670:145:5197:-292.667,0,-1234.79	0/1:217:149,68:149:5326:68:2444:-154.891,0,-413.59	0/1:213:143,70:143:5091:70:2493:-160.502,0,-394.16	0/1:29:20,9:20:720:9:324:-20.776,0,-56.2067	0/1:417:308,109:308:11024:109:3889:-224.656,0,-866.499	0/1:283:236,47:236:8458:47:1692:-67.3578,0,-676.025	0/1:732:500,232:500:17930:232:8284:-525.206,0,-1392.86	0/1:384:295,89:295:10544:89:3185:-171.202,0,-833.196	0/1:187:145,42:145:5208:42:1508:-79.6514,0,-412.563	0/1:256:179,77:179:6424:77:2764:-171.937,0,-501.167	0/1:386:324,61:324:11622:61:2177:-79.9381,0,-927.514	0/1:112:93,19:93:3325:19:680:-27.8138,0,-265.743	0/1:183:111,71:111:3980:71:2552:-174.783,0,-303.111	0/1:221:171,50:171:6111:50:1785:-94.4031,0,-483.067	0/1:75:62,13:62:2232:13:449:-18.1611,0,-178.566	0/1:201:164,37:164:5900:37:1298:-56.6025,0,-470.599	0/1:148:127,21:127:4560:21:752:-23.4538,0,-366.012	0/1:282:200,82:200:7128:82:2918:-177.947,0,-556.665	0/1:320:240,80:240:8598:80:2876:-162.58,0,-677.42
chr02	24105483	.	A	G	171219	PASS	AB=0.41711;ABP=1563.56;AC=93;AF=0.494681;AN=188;AO=10907;CIGAR=1X;DP=26155;DPB=26155;DPRA=46.862;EPP=23565.8;EPPR=32935.8;GTI=1;LEN=1;MEANALT=1.06452;MQM=59.9123;MQMR=59.9099;NS=94;NUMALT=1;ODDS=69.55;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=388766;QR=542954;RO=15242;RPL=14;RPP=23565.8;RPPR=32953.1;RPR=10893;RUN=1;SAF=10907;SAP=23687.3;SAR=0;SRF=15240;SRP=33083.2;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:107:56,51:56:1996:51:1757:-126.193,0,-147.704	0/1:479:228,251:228:8126:251:8964:-662.544,0,-587.162	0/1:313:218,95:218:7757:95:3416:-212.068,0,-603.913	0/1:667:350,316:350:12485:316:11279:-814.147,0,-922.576	0/1:138:91,47:91:3241:47:1654:-107.6,0,-250.369	0/1:133:92,41:92:3262:41:1430:-88.9547,0,-253.762	0/1:500:352,148:352:12450:148:5293:-325.972,0,-969.14	0/1:312:190,122:190:6781:122:4346:-297.39,0,-516.429	0/1:298:172,126:172:6086:126:4490:-314.556,0,-458.134	0/1:355:179,176:179:6327:176:6240:-454.829,0,-462.621	0/1:152:93,59:93:3332:59:2116:-144.952,0,-254.337	0/1:168:113,55:113:4029:55:1977:-127.632,0,-312.222	0/1:229:107,122:107:3832:122:4384:-325.786,0,-275.712	0/1:123:80,43:80:2864:43:1540:-101.866,0,-220.971	0/1:194:127,67:127:4544:67:2398:-157.675,0,-350.682	0/1:142:88,54:88:3164:54:1944:-132.49,0,-242.22	0/1:184:98,85:98:3494:85:3050:-219.28,0,-259.22	0/1:209:89,120:89:3177:120:4300:-324.261,0,-223.231	0/1:148:86,62:86:3088:62:2213:-154.881,0,-233.595	0/1:656:456,199:456:16250:199:7088:-440.592,0,-1264.76	0/1:506:274,231:274:9742:231:8221:-587.024,0,-723.937	0/1:539:261,278:261:9245:278:9851:-724.149,0,-669.753	0/1:289:187,102:187:6669:102:3606:-237.749,0,-513.242	0/1:416:221,195:221:7866:195:6980:-502.386,0,-582.419	0/1:234:117,117:117:4189:117:4182:-306.109,0,-306.747	0/1:1194:578,616:578:20673:616:21896:-1610.28,0,-1500.58	0/1:403:215,188:215:7643:188:6688:-479.885,0,-566.587	0/1:134:67,67:67:2363:67:2400:-175.883,0,-172.586	0/1:558:355,203:355:12669:203:7212:-481.133,0,-972.06	0/1:251:174,77:174:6171:77:2734:-170.742,0,-479.92	0/1:274:189,85:189:6714:85:3052:-192.427,0,-521.856	0/1:19:15,4:15:521:4:144:-7.59405,0,-41.4968	0/1:46:22,24:22:753:24:863:-64.1451,0,-54.2377	0/1:7:3,4:3:104:4:140:-10.8374,0,-7.5956	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:14:11,3:11:396:3:108:-5.86075,0,-31.7683	0/1:543:354,189:354:12700:189:6748:-443.933,0,-979.294	0/1:585:408,177:408:14501:177:6311:-391.839,0,-1128.32	0/1:225:110,115:110:3929:115:4132:-304.33,0,-286.066	0/0:6:6,0:6:208:0:0:0,-1.80618,-19.0591	0/1:387:212,175:212:7530:175:6225:-443.476,0,-561.247	0/1:152:75,77:75:2696:77:2764:-203.236,0,-197.127	0/1:382:255,127:255:9136:127:4522:-292.023,0,-707.214	0/1:180:117,63:117:4184:63:2252:-148.758,0,-322.557	0/1:181:117,64:117:4185:64:2292:-152.055,0,-322.344	0/1:407:211,196:211:7503:196:7012:-508.598,0,-552.793	0/1:248:164,84:164:5860:84:2975:-193.324,0,-452.588	0/1:429:289,140:289:10302:140:4938:-315.414,0,-797.929	0/1:323:188,135:188:6687:135:4799:-334.832,0,-504.321	0/1:363:169,193:169:5961:193:6924:-514.04,0,-427.413	0/1:582:385,197:385:13692:197:7014:-456.121,0,-1056.8	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/1:550:255,295:255:9068:295:10532:-782.225,0,-650.497	0/1:98:56,42:56:1996:42:1508:-106.384,0,-150.413	0/1:24:14,10:14:504:10:341:-23.793,0,-38.4734	0/1:380:239,141:239:8510:141:5038:-339.164,0,-651.31	0/1:189:95,94:95:3388:94:3372:-246.799,0,-247.971	0/1:13:7,6:7:252:6:212:-15.5114,0,-19.1156	0/1:44:29,15:29:1044:15:540:-35.6866,0,-81.0295	0/1:200:111,89:111:3948:89:3155:-223.966,0,-295.306	0/1:341:152,189:152:5417:189:6761:-505.906,0,-385.01	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:474:237,236:237:8446:236:8444:-617.174,0,-617.338	0/1:547:386,161:386:13736:161:5727:-350.882,0,-1071.26	0/1:193:114,79:114:4080:79:2828:-196.66,0,-309.283	0/1:274:137,137:137:4842:137:4860:-355.069,0,-353.439	0/1:461:316,145:316:11216:145:5130:-323.068,0,-870.552	0/1:290:216,74:216:7729:74:2640:-150.547,0,-608.302	0/1:47:32,15:32:1144:15:540:-34.7881,0,-89.1211	0/1:173:130,43:130:4588:43:1544:-87.1749,0,-360.996	0/1:206:135,71:135:4860:71:2546:-167.378,0,-375.537	0/1:52:29,23:29:1036:23:828:-59.1906,0,-77.9004	0/1:390:195,195:195:6931:195:6925:-505.903,0,-506.438	0/1:158:94,64:94:3345:64:2281:-157.987,0,-253.668	0/1:454:224,230:224:7975:230:8211:-602.325,0,-580.959	0/1:577:252,325:252:8990:325:11603:-870.442,0,-635.35	0/1:217:146,71:146:5209:71:2529:-162.53,0,-403.624	0/1:214:150,64:150:5314:64:2288:-141.754,0,-413.946	0/1:29:13,16:13:468:16:576:-43.4436,0,-33.5385	0/1:414:216,198:216:7651:198:7053:-510.197,0,-563.988	0/1:279:186,93:186:6614:93:3332:-216.11,0,-510.978	0/1:724:510,214:510:18173:214:7582:-464.453,0,-1417.21	0/1:379:184,195:184:6604:195:6945:-510.969,0,-480.263	0/1:185:88,97:88:3133:97:3431:-253.311,0,-226.345	0/1:255:128,127:128:4566:127:4511:-329.378,0,-334.341	0/1:384:248,136:248:8842:136:4846:-318.63,0,-680.11	0/1:112:71,41:71:2537:41:1468:-98.6926,0,-194.864	0/1:181:118,63:118:4216:63:2249:-148.185,0,-325.134	0/1:219:108,111:108:3833:111:3953:-290.011,0,-279.24	0/1:75:47,28:47:1688:28:1008:-68.4591,0,-129.63	0/1:201:145,56:145:5192:56:1978:-117.784,0,-406.723	0/1:147:115,32:115:4105:32:1148:-59.3784,0,-325.383	0/1:279:135,144:135:4767:144:5119:-376.856,0,-345.185	0/1:317:152,165:152:5452:165:5888:-434.597,0,-395.022
chr02	24105485	.	C	A	88740.8	PASS	AB=0.286014;ABP=10425.4;AC=92;AF=0.489362;AN=188;AO=7497;CIGAR=1X;DP=26229;DPB=26229;DPRA=0;EPP=16195.8;EPPR=40388.5;GTI=13;LEN=1;MEANALT=1.06383;MQM=59.8869;MQMR=59.9228;NS=94;NUMALT=1;ODDS=0.188145;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=268637;QR=670280;RO=18726;RPL=10;RPP=16195.8;RPPR=40440.5;RPR=7487;RUN=1;SAF=7497;SAP=16282.5;SAR=0;SRF=18720;SRP=40613.9;SRR=6;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:108:79,29:79:2801:29:1044:-61.7636,0,-219.801	0/1:479:367,112:367:13138:112:4003:-216.236,0,-1038.03	0/1:308:212,96:212:7608:96:3416:-214.93,0,-591.005	0/1:672:507,165:507:18139:165:5913:-329.983,0,-1429.77	0/1:139:81,58:81:2884:58:2076:-145.267,0,-217.95	0/1:131:86,45:86:3084:45:1605:-105.303,0,-238.353	0/1:497:316,181:316:11320:181:6479:-432.826,0,-869.025	0/1:312:226,86:226:8094:86:3084:-183.866,0,-634.532	0/1:304:219,85:219:7851:85:3030:-181.408,0,-615.1	0/1:360:257,103:257:9177:103:3677:-222.726,0,-717.529	0/1:151:85,66:85:3048:66:2370:-168.101,0,-229.094	0/1:168:110,58:110:3944:58:2084:-137.254,0,-304.578	0/1:230:170,60:170:6096:60:2148:-124.302,0,-479.494	0/1:125:85,39:85:3052:39:1400:-88.6117,0,-237.221	0/1:197:127,70:127:4552:70:2505:-166.353,0,-350.523	0/1:142:99,43:99:3551:43:1533:-95.4972,0,-277.051	0/1:186:142,44:142:5087:44:1584:-86.8599,0,-401.981	0/1:208:169,39:169:6064:39:1400:-63.6788,0,-483.247	0/1:148:102,46:102:3660:46:1656:-104.776,0,-285.051	0/1:661:415,246:415:14857:246:8852:-597.648,0,-1137.88	0/1:504:378,126:378:13552:126:4510:-254.043,0,-1067.42	0/1:541:393,148:393:14061:148:5292:-313.535,0,-1102.27	0/1:292:206,86:206:7381:86:3088:-190.202,0,-576.429	0/1:416:314,102:314:11254:102:3649:-203.381,0,-886.863	0/1:237:166,71:166:5899:71:2548:-158.226,0,-459.668	0/1:1191:899,292:899:32219:292:10477:-584.29,0,-2539.78	0/1:405:295,110:295:10561:110:3960:-234.666,0,-828.466	0/1:137:100,37:100:3588:37:1317:-77.5887,0,-281.849	0/1:555:405,150:405:14473:150:5388:-317.975,0,-1135.21	0/1:254:154,100:154:5499:100:3592:-247.016,0,-418.573	0/1:277:189,88:189:6768:88:3134:-198.898,0,-525.805	0/1:19:14,5:14:496:5:180:-10.8325,0,-39.2547	0/1:47:34,13:34:1215:13:468:-28.3112,0,-95.5073	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/0:12:11,1:11:396:1:36:0,-0.0140849,-32.3845	0/1:15:10,5:10:352:5:180:-12.0366,0,-27.5027	0/1:543:375,168:375:13456:168:6048:-380.96,0,-1047.31	0/1:582:386,196:386:13810:196:7041:-458.521,0,-1066.99	0/1:224:173,51:173:6185:51:1821:-96.7303,0,-489.316	0/1:6:2,4:2:68:4:144:-11.5074,0,-4.65153	0/1:391:265,126:265:9481:126:4536:-290.701,0,-734.901	0/1:155:118,37:118:4228:37:1332:-73.5227,0,-334.032	0/1:380:262,118:262:9400:118:4229:-266.391,0,-731.56	0/1:182:140,42:140:5024:42:1508:-81.2271,0,-397.518	0/1:180:135,45:135:4827:45:1605:-90.5527,0,-380.399	0/1:411:294,117:294:10486:117:4183:-252.916,0,-819.767	0/1:248:175,73:175:6267:73:2605:-160.041,0,-489.195	0/1:430:311,119:311:11093:119:4265:-254.583,0,-868.728	0/1:323:237,86:237:8433:86:3082:-180.236,0,-661.715	0/1:363:298,65:298:10647:65:2336:-101.225,0,-848.861	0/1:584:382,201:382:13633:201:7189:-471.183,0,-1050.9	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:553:440,113:440:15756:113:4044:-197.662,0,-1251.24	0/1:99:54,45:54:1918:45:1616:-115.928,0,-142.964	0/1:24:16,8:16:572:8:288:-19.0427,0,-44.5887	0/1:383:276,107:276:9878:107:3844:-230.671,0,-773.633	0/1:187:148,39:148:5291:39:1381:-68.2641,0,-420.033	0/0:12:11,1:11:392:1:36:0,-0.0140849,-32.0218	0/1:44:34,10:34:1220:10:356:-19.1359,0,-96.8569	0/1:200:129,71:129:4623:71:2556:-170.081,0,-356.026	0/1:344:272,72:272:9749:72:2588:-129.614,0,-773.795	0/1:7:5,2:5:176:2:72:-4.72951,0,-14.0778	0/1:477:371,106:371:13302:106:3812:-199.624,0,-1053.34	0/1:544:349,195:349:12466:195:6971:-463.679,0,-957.974	0/1:193:140,53:140:5007:53:1908:-113.899,0,-392.676	0/1:276:191,84:191:6821:84:3005:-187.623,0,-530.894	0/1:460:312,148:312:11141:148:5285:-337.308,0,-863.909	0/1:291:186,105:186:6680:105:3770:-251.862,0,-513.666	0/1:49:32,17:32:1144:17:608:-40.3016,0,-88.5109	0/1:172:110,62:110:3921:62:2211:-147.471,0,-301.305	0/1:208:131,77:131:4694:77:2768:-186.746,0,-360.003	0/1:53:35,18:35:1252:18:640:-41.9747,0,-97.0129	0/1:388:295,93:295:10552:93:3330:-183.116,0,-832.772	0/1:157:97,60:97:3476:60:2150:-146.498,0,-265.781	0/1:459:373,86:373:13367:86:3073:-138.624,0,-1064.48	0/1:581:470,110:470:16833:110:3944:-180.155,0,-1339.66	0/1:217:138,78:138:4932:78:2789:-185.866,0,-378.07	0/1:214:135,79:135:4810:79:2840:-191.383,0,-368.616	0/1:27:23,4:23:824:4:144:-4.99093,0,-66.354	0/1:413:308,105:308:11045:105:3746:-213.012,0,-869.612	0/1:280:185,95:185:6632:95:3385:-220.575,0,-512.645	0/1:731:447,284:447:15968:284:10186:-696.59,0,-1216.73	0/1:382:288,94:288:10344:94:3350:-186.71,0,-815.784	0/1:185:139,46:139:5000:46:1637:-91.9238,0,-394.384	0/1:255:205,49:205:7340:49:1764:-82.2223,0,-583.811	0/1:381:266,115:266:9522:115:4117:-256.016,0,-740.52	0/1:112:82,30:82:2948:30:1072:-63.0771,0,-231.829	0/1:184:138,46:138:4940:46:1652:-93.5781,0,-389.361	0/1:221:161,60:161:5792:60:2144:-126.672,0,-454.863	0/1:75:55,20:55:1972:20:720:-42.5515,0,-155.178	0/1:201:131,70:131:4678:70:2520:-166.544,0,-360.587	0/1:147:93,54:93:3348:54:1944:-130.985,0,-257.284	0/1:281:228,53:228:8155:53:1904:-87.0377,0,-649.345	0/1:318:245,73:245:8788:73:2613:-139.632,0,-694.944
chr02	24105492	.	A	G	29846.7	PASS	AB=0.185943;ABP=23491.3;AC=83;AF=0.441489;AN=188;AO=5299;CIGAR=1X;DP=29817;DPB=29817;DPRA=33.935;EPP=11509.6;EPPR=52324.1;GTI=41;LEN=1;MEANALT=1.1;MQM=59.8434;MQMR=59.9208;NS=94;NUMALT=1;ODDS=0.35787;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=189455;QR=865876;RO=24509;RPL=0;RPP=11509.6;RPPR=52375.8;RPR=5299;RUN=1;SAF=5299;SAP=11509.6;SAR=0;SRF=24503;SRP=53171.5;SRR=6;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:137:102,34:102:3613:34:1205:-67.4499,0,-284.071	0/1:528:440,88:440:15503:88:3140:-123.745,0,-1236.05	0/1:324:284,40:284:9979:40:1425:-30.932,0,-800.26	0/1:786:636,150:636:22533:150:5346:-244.662,0,-1790.73	0/1:154:131,23:131:4626:23:828:-28.4855,0,-370.148	0/1:162:131,31:131:4589:31:1112:-51.6236,0,-364.41	0/1:529:466,63:466:16547:63:2260:-44.4178,0,-1329.06	0/1:331:292,39:292:10320:39:1385:-25.2972,0,-829.073	0/1:383:291,92:291:10313:92:3308:-182.625,0,-812.795	0/1:418:343,75:343:12118:75:2665:-114.26,0,-964.609	0/1:159:143,16:143:5062:16:561:-2.95336,0,-407.861	0/1:192:162,30:162:5780:30:1076:-39.3484,0,-462.516	0/1:287:218,69:218:7761:69:2476:-136.682,0,-611.898	0/1:137:121,16:121:4336:16:557:-9.2111,0,-349.174	0/1:215:182,33:182:6500:33:1188:-42.5071,0,-520.345	0/1:166:135,31:135:4797:31:1108:-50.06,0,-381.91	0/1:226:178,48:178:6326:48:1716:-86.4711,0,-501.401	0/1:251:190,61:190:6734:61:2190:-121.794,0,-530.575	0/1:185:142,43:142:5063:43:1548:-83.9016,0,-400.126	0/0:670:606,62:606:21260:62:2232:0,-0.305832,-1711.73	0/1:592:454,138:454:16021:138:4937:-266.188,0,-1262.27	0/1:620:501,119:501:17697:119:4268:-197.641,0,-1405.58	0/1:313:269,44:269:9379:44:1565:-46.8815,0,-749.868	0/1:505:395,110:395:13923:110:3910:-200.07,0,-1100.2	0/1:255:217,38:217:7690:38:1345:-44.432,0,-615.365	0/1:1322:1106,215:1106:38641:215:7666:-291.955,0,-3077.77	0/1:503:374,129:374:13167:129:4606:-263.279,0,-1032.92	0/1:162:125,37:125:4460:37:1317:-70.0599,0,-352.769	0/1:626:518,108:518:18232:108:3853:-158.519,0,-1452.05	0/1:267:227,40:227:7960:40:1440:-49.5188,0,-636.053	0/1:288:257,31:257:9027:31:1108:-13.3344,0,-725.724	0/0:19:18,1:18:640:1:36:0,-2.12129,-54.331	0/1:47:41,6:41:1415:6:212:-5.27639,0,-113.491	0/1:7:6,1:6:212:1:36:-1.49107,0,-17.3176	0/0:13:12,1:12:428:1:36:0,-0.318822,-35.2642	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:620:508,112:508:18047:112:4013:-174.715,0,-1437.15	0/0:598:544,54:544:19195:54:1944:0,-4.79546,-1551.32	0/1:269:213,56:213:7613:56:2001:-99.3813,0,-604.229	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:453:368,85:368:13005:85:3026:-136.2,0,-1033.28	0/1:196:145,51:145:5142:51:1832:-106.149,0,-403.914	0/1:406:356,50:356:12602:50:1785:-38.711,0,-1011.67	0/1:204:168,36:168:5978:36:1277:-53.821,0,-476.717	0/1:210:175,35:175:6249:35:1245:-49.1364,0,-499.289	0/1:483:384,97:384:13530:97:3492:-169.354,0,-1072.36	0/1:283:236,47:236:8257:47:1684:-66.6238,0,-657.939	0/1:440:398,42:398:14065:42:1504:-3.20139,0,-1133.17	0/1:341:292,49:292:10358:49:1760:-56.0326,0,-829.164	0/1:444:338,106:338:11959:106:3789:-207.55,0,-942.512	0/1:637:550,87:550:19387:87:3082:-85.8506,0,-1552.57	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/1:610:516,93:516:18187:93:3344:-117.613,0,-1452.87	0/1:113:94,19:94:3326:19:684:-27.8739,0,-265.411	0/1:22:19,3:19:676:3:108:-3.45251,0,-54.5453	0/1:408:362,46:362:12801:46:1607:-21.9611,0,-1028.88	0/1:222:177,45:177:6215:45:1612:-78.5414,0,-492.123	0/0:13:13,0:13:453:0:0:0,-3.91339,-41.0996	0/1:59:43,16:43:1517:16:576:-34.4142,0,-119.056	0/1:208:183,25:183:6434:25:900:-18.7052,0,-516.535	0/1:451:325,126:325:11578:126:4520:-271.196,0,-906.127	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:641:451,190:451:15867:190:6809:-419.918,0,-1234.75	0/0:554:504,50:504:17787:50:1781:0,-6.19977,-1439.79	0/1:209:181,28:181:6378:28:1004:-27.7606,0,-511.2	0/1:316:261,55:261:9238:55:1976:-82.9876,0,-736.131	0/1:505:421,84:421:14914:84:3003:-118.437,0,-1189.79	0/0:286:268,18:268:9410:18:648:0,-27.4442,-788.212	0/1:57:47,10:47:1664:10:356:-15.221,0,-132.881	0/1:201:163,38:163:5774:38:1360:-62.1835,0,-459.261	0/1:232:197,35:197:6956:35:1245:-42.5135,0,-556.271	0/1:70:53,17:53:1857:17:612:-34.3413,0,-146.318	0/1:441:357,84:357:12576:84:2978:-135.447,0,-998.93	0/1:184:144,40:144:5061:40:1428:-73.4047,0,-400.238	0/1:501:425,76:425:15055:76:2712:-93.5036,0,-1203.77	0/1:706:526,180:526:18616:180:6461:-368.985,0,-1462.51	0/0:221:206,15:206:7281:15:540:0,-17.5944,-605.852	0/1:246:205,41:205:7168:41:1472:-58.7194,0,-571.079	0/1:26:23,3:23:794:3:108:-2.24839,0,-63.9465	0/1:470:387,83:387:13696:83:2969:-125.957,0,-1090.93	0/1:306:261,45:261:9168:45:1616:-53.6148,0,-732.953	0/1:809:693,116:693:24494:116:4126:-126.438,0,-1960.22	0/1:478:357,120:357:12670:120:4312:-244.297,0,-996.038	0/1:229:177,52:177:6297:52:1856:-98.3839,0,-497.818	0/1:317:243,74:243:8646:74:2660:-144.217,0,-682.697	0/1:439:363,76:363:12957:76:2717:-112.618,0,-1031.72	0/1:127:101,26:101:3601:26:936:-46.322,0,-286.057	0/1:215:179,36:179:6373:36:1288:-51.496,0,-508.94	0/1:292:212,80:212:7577:80:2857:-169.462,0,-594.068	0/1:76:68,8:68:2412:8:288:-3.38913,0,-194.459	0/1:214:189,25:189:6719:25:885:-15.5461,0,-540.176	0/1:150:127,23:127:4434:23:813:-28.3346,0,-354.078	0/1:395:263,132:263:9212:132:4732:-307.11,0,-710.137	0/1:401:304,96:304:10814:96:3425:-187.68,0,-852.108
chr02	24105588	.	G	T	37300.6	PASS	AB=0.190374;ABP=24934.8;AC=87;AF=0.462766;AN=188;AO=5825;CIGAR=1X;DP=32090;DPB=32090;DPRA=86.2527;EPP=12634.5;EPPR=56943.4;GTI=43;LEN=1;MEANALT=1.15054;MQM=59.9519;MQMR=59.9617;NS=94;NUMALT=1;ODDS=2.34518;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=208471;QR=930553;RO=26250;RPL=1;RPP=12643.2;RPPR=56934.7;RPR=5824;RUN=1;SAF=1;SAP=12643.2;SAR=5824;SRF=3;SRP=56978.1;SRR=26247;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:39,15:39:1379:15:536:-32.3192,0,-108.152	0/1:528:354,174:354:12538:174:6246:-403.276,0,-969.316	0/1:391:315,76:315:11083:76:2706:-126.081,0,-879.613	0/1:1016:796,220:796:28270:220:7881:-403.464,0,-2237.61	0/1:171:152,19:152:5400:19:684:-10.4142,0,-434.642	0/1:158:140,18:140:4985:18:648:-11.0891,0,-401.131	0/1:593:524,69:524:18671:69:2480:-44.9244,0,-1501.45	0/1:328:262,66:262:9278:66:2376:-115.359,0,-736.255	0/1:292:246,46:246:8793:46:1656:-61.4277,0,-703.398	0/1:248:205,43:205:7288:43:1525:-62.8822,0,-581.32	0/1:212:159,53:159:5657:53:1893:-106.829,0,-445.434	0/1:200:170,30:170:6027:30:1068:-36.2255,0,-482.333	0/1:305:246,59:246:8681:59:2120:-99.2543,0,-689.477	0/1:169:136,33:136:4766:33:1169:-54.6408,0,-378.214	0/1:186:149,37:149:5283:37:1328:-63.8307,0,-419.615	0/1:116:96,20:96:3392:20:720:-30.2093,0,-270.577	0/1:260:202,58:202:7129:58:2068:-108.123,0,-563.407	0/1:237:179,58:179:6323:58:2084:-116.486,0,-497.82	0/1:164:127,37:127:4468:37:1318:-69.552,0,-352.924	0/1:776:676,100:676:23982:100:3550:-86.1065,0,-1924.15	0/1:647:516,130:516:18176:130:4656:-224.377,0,-1440.63	0/1:557:489,68:489:17345:68:2432:-51.4619,0,-1392.94	0/0:337:325,12:325:11601:12:432:0,-62.2268,-1004.26	0/1:493:412,81:412:14623:81:2907:-113.457,0,-1167.41	0/1:338:297,41:297:10519:41:1468:-30.668,0,-844.886	0/1:1302:1096,206:1096:39036:206:7370:-271.385,0,-3119.71	0/1:558:381,177:381:13457:177:6348:-403.435,0,-1042.96	0/1:171:122,49:122:4301:49:1751:-106.397,0,-335.793	0/1:784:646,137:646:22916:137:4909:-205.893,0,-1824.69	0/1:404:296,108:296:10508:108:3864:-226.333,0,-824.021	0/1:429:386,43:386:13664:43:1548:-10.4712,0,-1100.41	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:27:19,8:19:684:8:288:-18.1396,0,-53.7625	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/1:553:463,90:463:16418:90:3229:-124.361,0,-1310.71	0/1:642:573,67:573:20275:67:2378:-21.2524,0,-1631.19	0/1:254:184,70:184:6450:70:2505:-149.234,0,-504.134	0/1:6:3,3:3:108:3:104:-7.89663,0,-8.26899	0/1:806:625,180:625:22255:180:6456:-338.435,0,-1759.68	0/1:133:94,39:94:3335:39:1392:-85.542,0,-260.33	0/1:356:322,34:322:11330:34:1224:-3.30037,0,-912.428	0/1:219:189,30:189:6660:30:1071:-30.7714,0,-533.556	0/1:215:190,25:190:6587:25:892:-15.8767,0,-528.173	0/0:395:374,21:374:13270:21:752:0,-50.9006,-1126.09	0/1:330:289,41:289:10259:41:1468:-33.0762,0,-823.892	0/1:629:546,82:546:19304:82:2931:-73.5979,0,-1547.52	0/1:325:279,46:279:9881:46:1656:-51.4921,0,-791.406	0/1:524:396,128:396:14049:128:4596:-256.061,0,-1106.45	0/1:621:522,99:522:18524:99:3560:-133.667,0,-1479.81	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/1:749:574,174:574:20358:174:6229:-335.174,0,-1606.2	0/1:230:203,27:203:7227:27:972:-18.561,0,-581.132	0/1:9:8,1:8:284:1:36:-0.889005,0,-23.1941	0/1:425:353,72:353:12537:72:2573:-103.81,0,-999.583	0/0:199:183,15:183:6532:15:497:0,-15.1512,-543.299	0/1:7:2,5:2:68:5:180:-14.4449,0,-4.3505	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/1:228:198,30:198:7044:30:1080:-28.8784,0,-565.39	0/1:461:338,123:338:11919:123:4401:-257.486,0,-933.798	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:981:769,211:769:27313:211:7527:-382.098,0,-2162.03	0/1:580:468,112:468:16621:112:4015:-186.94,0,-1320.96	0/1:172:135,37:135:4788:37:1328:-68.0451,0,-379.295	0/1:423:337,86:337:11903:86:3046:-147.028,0,-943.75	0/0:573:535,38:535:18977:38:1360:0,-49.7987,-1584.01	0/0:398:367,30:367:13005:30:1056:0,-24.5204,-1074.74	0/1:45:29,16:29:1019:16:572:-38.2671,0,-78.3675	0/0:243:234,9:234:8352:9:316:0,-44.372,-722.909	0/1:216:166,49:166:5870:49:1764:-94.0016,0,-462.748	0/1:50:40,10:40:1428:10:356:-17.3111,0,-113.721	0/1:447:345,102:345:12241:102:3653:-194.412,0,-966.982	0/1:197:161,36:161:5708:36:1288:-56.9207,0,-454.531	0/1:643:526,117:526:18727:117:4196:-184.258,0,-1491.41	0/1:781:544,236:544:19291:236:8458:-526.054,0,-1500.58	0/1:291:248,43:248:8823:43:1544:-51.6533,0,-705.969	0/1:237:177,60:177:6292:60:2152:-122.595,0,-495.004	0/1:6:3,3:3:104:3:108:-8.26899,0,-7.89663	0/1:509:415,94:415:14751:94:3384:-151.55,0,-1174	0/1:319:287,32:287:10225:32:1129:-5.88778,0,-824.152	0/1:785:693,92:693:24628:92:3308:-61.6244,0,-1979.55	0/1:431:330,101:330:11683:101:3624:-196.621,0,-921.604	0/1:249:185,64:185:6514:64:2284:-130.866,0,-511.392	0/1:335:245,90:245:8675:90:3228:-189.893,0,-679.906	0/1:381:310,71:310:10944:71:2531:-113.349,0,-870.168	0/1:143:124,19:124:4404:19:676:-18.1207,0,-353.486	0/1:228:188,40:188:6634:40:1436:-60.9028,0,-528.51	0/1:285:232,53:232:8171:53:1884:-84.0434,0,-649.61	0/1:78:63,15:63:2192:15:540:-25.456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chr02	24105610	.	C	G	72750.9	PASS	AB=0.239347;ABP=19211.9;AC=91;AF=0.484043;AN=188;AO=7791;CIGAR=1X;DP=32568;DPB=32568;DPRA=63.1241;EPP=16756.3;EPPR=52996.2;GTI=22;LEN=1;MEANALT=1.21978;MQM=59.9116;MQMR=59.9838;NS=94;NUMALT=1;ODDS=0.123913;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=278171;QR=885211;RO=24755;RPL=7773;RPP=16765;RPPR=53004.8;RPR=18;RUN=1;SAF=1;SAP=16912.3;SAR=7790;SRF=1;SRP=53749.1;SRR=24754;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:41,13:41:1476:13:464:-25.8419,0,-116.881	0/1:537:423,114:423:15101:114:4084:-206.093,0,-1197.15	0/1:393:282,111:282:10115:111:3964:-238.589,0,-791.974	0/1:1028:814,213:814:29106:213:7625:-376.732,0,-2309.16	0/1:174:137,37:137:4908:37:1328:-67.4384,0,-389.492	0/1:162:114,48:114:4069:48:1707:-105.129,0,-317.628	0/1:605:433,172:433:15504:172:6143:-370.751,0,-1212.93	0/1:340:244,96:244:8713:96:3440:-207.463,0,-681.812	0/1:301:242,59:242:8633:59:2099:-98.5494,0,-686.354	0/1:249:198,51:198:7077:51:1828:-89.8445,0,-562.031	0/1:214:172,42:172:6167:42:1508:-71.5942,0,-490.704	0/1:202:152,50:152:5448:50:1779:-99.5841,0,-429.64	0/1:311:250,60:250:8960:60:2152:-100.268,0,-712.7	0/1:170:128,41:128:4553:41:1472:-81.5423,0,-358.703	0/1:182:126,55:126:4519:55:1958:-121.648,0,-352.03	0/1:121:86,35:86:3071:35:1256:-76.9207,0,-240.194	0/1:262:215,47:215:7691:47:1684:-72.9772,0,-613.353	0/1:238:192,46:192:6884:46:1647:-76.8727,0,-547.98	0/1:165:129,36:129:4620:36:1283:-66.1027,0,-366.293	0/1:795:571,223:571:20474:223:7923:-473.719,0,-1602.77	0/1:664:544,120:544:19433:120:4277:-185.224,0,-1548.63	0/1:567:473,94:473:16904:94:3343:-130.404,0,-1350.32	0/1:348:239,109:239:8546:109:3900:-246.332,0,-664.377	0/1:494:381,111:381:13590:111:3960:-208.124,0,-1074.42	0/1:346:266,80:266:9457:80:2859:-153.391,0,-746.936	0/1:1324:1039,285:1039:37189:285:10174:-517.029,0,-2946.86	0/1:568:473,95:473:16926:95:3406:-135.763,0,-1352	0/1:169:139,30:139:4973:30:1080:-46.6392,0,-396.843	0/1:803:592,211:592:21174:211:7529:-434.475,0,-1663.39	0/1:407:311,96:311:11140:96:3432:-186.567,0,-879.966	0/1:433:286,147:286:10187:147:5209:-338.605,0,-786.412	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.57002	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:28:23,5:23:824:5:180:-8.12322,0,-66.0545	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/1:554:423,131:423:15197:131:4644:-251.344,0,-1200.67	0/1:670:439,230:439:15635:230:8217:-537.782,0,-1205.07	0/1:254:193,60:193:6920:60:2156:-117.787,0,-546.34	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:817:659,156:659:23581:156:5508:-250.134,0,-1875.95	0/1:137:110,26:110:3936:26:936:-43.2596,0,-313.133	0/1:371:280,91:280:10001:91:3244:-180.497,0,-788.347	0/1:223:152,71:152:5452:71:2552:-162.8,0,-423.673	0/1:216:141,75:141:5048:75:2661:-174.694,0,-389.442	0/1:396:284,112:284:10122:112:4014:-242.236,0,-791.706	0/1:338:234,103:234:8392:103:3673:-228.954,0,-653.476	0/1:644:502,142:502:17956:142:5069:-262.491,0,-1421.77	0/1:331:244,87:244:8742:87:3116:-181.026,0,-687.126	0/1:533:446,87:446:15945:87:3084:-117.338,0,-1274.28	0/1:630:442,188:442:15755:188:6726:-415.763,0,-1228	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/1:760:610,150:610:21814:150:5375:-255.096,0,-1733.91	0/1:235:192,43:192:6872:43:1536:-67.791,0,-547.802	0/1:9:5,4:5:180:4:140:-10.2353,0,-13.8428	0/1:436:340,96:340:12165:96:3427:-177.106,0,-963.376	0/1:201:161,40:161:5756:40:1409:-66.598,0,-456.713	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:11:8,3:8:284:3:108:-6.76384,0,-22.592	0/1:227:164,62:164:5864:62:2205:-130.321,0,-459.477	0/1:457:383,74:383:13722:74:2640:-100.273,0,-1097.19	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:997:776,221:776:27735:221:7891:-410.09,0,-2195.2	0/1:580:429,151:429:15341:151:5407:-312.162,0,-1205.8	0/1:174:122,51:122:4372:51:1828:-112.51,0,-341.364	0/1:416:335,80:335:11979:80:2864:-132.75,0,-952.718	0/1:580:393,187:393:13960:187:6654:-423.827,0,-1081.57	0/1:411:251,160:251:8945:160:5719:-391.076,0,-681.18	0/1:43:36,7:36:1296:7:252:-10.0847,0,-104	0/1:247:192,55:192:6876:55:1953:-101.689,0,-544.553	0/1:221:172,49:172:6180:49:1726:-88.6662,0,-489.767	0/1:51:37,14:37:1317:14:491:-29.1234,0,-103.477	0/1:455:362,93:362:12908:93:3306:-160.791,0,-1024.57	0/1:205:155,50:155:5543:50:1792:-99.8432,0,-437.284	0/1:648:530,118:530:18876:118:4213:-184.26,0,-1503.28	0/1:800:649,151:649:23233:151:5412:-246.379,0,-1849.51	0/1:296:177,117:177:6327:117:4188:-287.741,0,-480.66	0/1:240:170,70:170:6042:70:2508:-153.713,0,-471.635	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:517:393,124:393:14078:124:4426:-242.868,0,-1111.15	0/1:328:213,115:213:7625:115:4106:-270.988,0,-587.545	0/1:793:567,225:567:20246:225:8055:-486.091,0,-1582.87	0/1:436:351,85:351:12595:85:3052:-143.66,0,-1002.12	0/1:243:198,44:198:7116:44:1576:-68.9202,0,-567.286	0/1:334:273,60:273:9757:60:2131:-91.5435,0,-777.559	0/1:381:286,95:286:10232:95:3406:-192.027,0,-806.113	0/1:141:102,38:102:3656:38:1364:-80.5567,0,-286.74	0/1:234:172,62:172:6139:62:2222:-129.803,0,-482.17	0/1:282:228,54:228:8158:54:1926:-88.7249,0,-649.321	0/1:81:61,20:61:2192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chr02	24105616	.	G	T	34291.4	PASS	AB=0.187763;ABP=25358;AC=86;AF=0.457447;AN=188;AO=5781;CIGAR=1X;DP=32509;DPB=32509;DPRA=69.9011;EPP=12530.2;EPPR=57955.3;GTI=43;LEN=1;MEANALT=1.13978;MQM=59.9524;MQMR=59.9667;NS=94;NUMALT=1;ODDS=1.18984;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205067;QR=952884;RO=26712;RPL=5779;RPP=12538.9;RPPR=57964;RPR=2;RUN=1;SAF=1;SAP=12547.6;SAR=5780;SRF=1;SRP=57998.7;SRR=26711;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:56:40,16:40:1409:16:576:-35.3173,0,-110.248	0/1:529:360,169:360:12861:169:5976:-378.703,0,-998.064	0/1:393:317,75:317:11281:75:2647:-120.109,0,-895.45	0/1:1025:809,216:809:28884:216:7664:-381.239,0,-2290.14	0/1:174:155,19:155:5528:19:669:-8.15473,0,-445.267	0/1:165:146,19:146:5214:19:684:-12.2204,0,-419.611	0/1:596:532,64:532:18989:64:2268:-24.962,0,-1529.16	0/1:332:266,66:266:9485:66:2353:-112.085,0,-753.67	0/1:299:254,45:254:9051:45:1612:-55.3621,0,-724.562	0/1:249:207,42:207:7399:42:1504:-60.6929,0,-591.001	0/1:215:162,53:162:5782:53:1896:-106.194,0,-455.774	0/1:202:172,30:172:6158:30:1065:-35.3526,0,-493.509	0/1:306:249,57:249:8881:57:2044:-92.1166,0,-707.162	0/1:172:138,34:138:4889:34:1212:-57.6088,0,-388.383	0/1:183:149,34:149:5328:34:1220:-55.0183,0,-424.566	0/1:119:100,19:100:3566:19:680:-25.7066,0,-285.325	0/1:257:201,56:201:7173:56:1975:-100.651,0,-568.262	0/1:237:178,59:178:6367:59:2097:-117.654,0,-501.771	0/1:163:129,34:129:4620:34:1224:-61.3992,0,-366.895	0/1:788:691,95:691:24647:95:3352:-64.9972,0,-1979.56	0/1:665:531,134:531:18981:134:4732:-225.853,0,-1507.67	0/1:563:496,67:496:17719:67:2336:-41.0143,0,-1424.76	0/0:347:335,12:335:11983:12:418:0,-66.5073,-1040.09	0/1:497:419,78:419:14928:78:2785:-101.277,0,-1193.64	0/1:349:307,42:307:10950:42:1500:-30.2351,0,-880.343	0/1:1333:1121,212:1121:39970:212:7443:-268.624,0,-3194.25	0/1:570:396,174:396:14115:174:6191:-385.699,0,-1098.53	0/1:167:121,46:121:4331:46:1644:-97.9766,0,-339.693	0/1:796:660,136:660:23520:136:4774:-190.196,0,-1876.53	0/1:405:299,106:299:10686:106:3761:-216.768,0,-839.728	0/1:435:391,44:391:13938:44:1553:-9.10976,0,-1123.25	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:27:19,8:19:684:8:273:-16.7724,0,-53.7625	0/1:13:8,5:8:284:5:176:-12.2716,0,-21.99	0/1:561:473,88:473:16882:88:3160:-115.746,0,-1350.11	0/1:662:591,71:591:21020:71:2484:-24.526,0,-1691.97	0/1:250:182,68:182:6497:68:2436:-144.233,0,-509.558	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:813:631,182:631:22533:182:6402:-331.535,0,-1782.63	0/1:138:99,39:99:3556:39:1404:-85.1171,0,-278.705	0/0:371:335,35:335:11946:35:1207:0,-2.81376,-966.074	0/1:222:191,31:191:6844:31:1093:-31.8444,0,-549.2	0/1:215:190,25:190:6710:25:854:-12.4473,0,-539.244	0/0:407:386,21:386:13737:21:752:0,-54.5129,-1168.1	0/1:339:294,43:294:10489:43:1506:-34.0221,0,-842.105	0/1:643:558,85:558:19864:85:3014:-77.2257,0,-1593.73	0/1:332:287,45:287:10198:45:1575:-42.0925,0,-817.815	0/1:524:395,128:395:14144:128:4531:-250.156,0,-1114.92	0/1:632:532,98:532:19011:98:3498:-125.019,0,-1520.54	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/1:757:585,171:585:20787:171:6067:-318.195,0,-1642.39	0/1:233:206,27:206:7355:27:957:-16.3039,0,-591.85	0/1:9:8,1:8:275:1:36:-0.889005,0,-22.3742	0/1:431:359,72:359:12810:72:2527:-97.9291,0,-1022.77	0/0:199:182,17:182:6486:17:593:0,-7.15198,-531.075	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/1:231:202,29:202:7222:29:1029:-23.3832,0,-580.496	0/1:462:337,125:337:12003:125:4469:-263.303,0,-941.052	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:985:775,210:775:27606:210:7414:-370.791,0,-2187.2	0/1:583:474,109:474:16951:109:3839:-170.204,0,-1349.73	0/1:171:136,35:136:4876:35:1252:-61.5089,0,-387.515	0/1:420:335,85:335:11950:85:2999:-143.706,0,-948.928	0/0:579:542,37:542:19321:37:1324:0,-54.8428,-1618.71	0/0:410:380,29:380:13501:29:1036:0,-29.8885,-1121.31	0/1:44:28,16:28:995:16:576:-38.9297,0,-76.6187	0/0:249:241,8:241:8620:8:284:0,-49.0531,-749.893	0/1:217:170,47:170:6055:47:1672:-85.4438,0,-479.73	0/1:52:42,10:42:1508:10:349:-16.0874,0,-120.316	0/1:450:350,98:350:12461:98:3508:-180.709,0,-986.107	0/1:201:164,37:164:5824:37:1332:-59.6754,0,-463.761	0/1:662:544,117:544:19377:117:4151:-174.431,0,-1544.11	0/1:799:562,237:562:20082:237:8414:-516.733,0,-1566.36	0/1:289:246,43:246:8781:43:1524:-50.4549,0,-703.279	0/1:240:180,59:180:6435:59:2112:-118.043,0,-506.932	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:518:422,96:422:15075:96:3413:-151.451,0,-1200.45	0/1:329:295,34:295:10495:34:1193:-8.63431,0,-845.434	0/1:783:689,94:689:24632:94:3372:-67.9843,0,-1980.49	0/1:437:338,99:338:12090:99:3541:-187.347,0,-956.399	0/1:249:186,63:186:6649:63:2256:-128.346,0,-523.53	0/1:335:246,89:246:8802:89:3169:-184.586,0,-691.322	0/1:381:311,70:311:11105:70:2501:-110.648,0,-884.615	0/1:142:124,18:124:4439:18:648:-15.9056,0,-356.934	0/1:232:194,38:194:6888:38:1356:-52.5015,0,-550.154	0/1:282:232,50:232:8285:50:1796:-77.0319,0,-660.747	0/1:82:67,15:67:2403:15:540:-24.2521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chr02	24233965	.	GTGTT	ATGTT	46472.2	PASS	AB=0.548605;ABP=103.067;AC=50;AF=0.265957;AN=188;AO=2682;CIGAR=1X4M;DP=8357;DPB=8357;DPRA=1.41122;EPP=5826.9;EPPR=12293.5;GTI=4;LEN=1;MEANALT=1.15094;MQM=59.6275;MQMR=59.5252;NS=94;NUMALT=1;ODDS=0.254554;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=95963;QR=197137;RO=5664;RPL=2682;RPP=5826.9;RPPR=12293.5;RPR=0;RUN=1;SAF=0;SAP=5826.9;SAR=2682;SRF=0;SRP=12302.2;SRR=5664;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:42:42,0:42:1455:0:0:0,-12.6433,-131.234	0/0:98:98,0:98:3429:0:0:0,-29.5009,-308.823	0/1:131:42,89:42:1499:89:3166:-245.716,0,-95.7536	0/0:150:150,0:150:5237:0:0:0,-45.1545,-471.476	0/1:81:46,35:46:1595:35:1260:-89.2659,0,-119.437	0/1:90:53,37:53:1821:37:1332:-93.0888,0,-137.042	0/1:164:73,91:73:2534:91:3249:-243.157,0,-178.94	0/1:175:93,82:93:3236:82:2933:-211.316,0,-238.724	0/0:77:77,0:77:2645:0:0:0,-23.1793,-238.271	0/0:92:92,0:92:3249:0:0:0,-27.6948,-291.929	0/0:15:14,1:14:490:1:32:0,-1.31614,-41.2319	0/1:41:26,15:26:921:15:536:-36.2326,0,-70.7932	0/0:34:34,0:34:1150:0:0:0,-10.235,-103.794	0/1:47:20,27:20:688:27:968:-73.2713,0,-48.0912	0/1:49:16,33:16:565:33:1188:-92.4781,0,-36.4256	0/1:31:15,16:15:538:16:572:-42.4815,0,-39.4239	0/0:24:24,0:24:823:0:0:0,-7.22472,-74.3828	0/0:33:33,0:33:1170:0:0:0,-9.93399,-105.593	0/0:8:8,0:8:281:0:0:0,-2.40824,-25.6304	0/1:239:117,122:117:4077:122:4357:-320.084,0,-292.259	0/0:114:114,0:114:3944:0:0:0,-34.3174,-355.082	0/0:185:185,0:185:6418:0:0:0,-55.6905,-577.724	0/1:132:51,81:51:1763:81:2908:-222.104,0,-118.512	0/0:117:117,0:117:4123:0:0:0,-35.2205,-371.203	0/0:58:58,0:58:2003:0:0:0,-17.4597,-180.529	0/0:390:386,4:386:13393:4:144:0,-104.088,-1186.29	0/0:177:177,0:177:6124:0:0:0,-53.2823,-548.996	0/0:11:11,0:11:379:0:0:0,-3.31133,-34.4407	0/1:366:155,211:155:5456:211:7560:-570.191,0,-380.979	0/1:122:77,45:77:2668:45:1608:-108.276,0,-203.637	0/1:166:84,82:84:2908:82:2937:-214.585,0,-211.917	0/1:9:5,4:5:166:4:144:-10.5996,0,-12.5573	0/0:22:22,0:22:762:0:0:0,-6.62266,-68.8985	0/0:5:5,0:5:169:0:0:0,-1.50515,-15.534	0/0:11:11,0:11:391:0:0:0,-3.31133,-35.459	0/1:14:2,9:2:68:9:324:-25.8495,0,-2.80642	0/1:85:38,47:38:1325:47:1688:-126.618,0,-93.9045	0/1:275:115,159:115:3969:159:5694:-429.287,0,-272.564	0/0:23:23,0:23:800:0:0:0,-6.92369,-72.3093	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	0/0:161:161,0:161:5623:0:0:0,-48.4658,-506.151	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0942	0/1:190:91,99:91:3131:99:3524:-259.995,0,-224.794	0/1:26:15,11:15:530:11:396:-28.1536,0,-40.2038	0/1:48:25,23:25:841:23:813:-59.0385,0,-61.5479	0/0:121:121,0:121:4206:0:0:0,-36.4246,-378.726	0/1:108:59,49:59:2045:49:1744:-124.72,0,-150.773	0/1:180:85,95:85:2960:95:3397:-251.713,0,-212.429	0/1:144:52,92:52:1821:92:3294:-252.985,0,-120.821	0/0:54:54,0:54:1901:0:0:0,-16.2556,-171.367	0/1:192:79,113:79:2769:113:4030:-305.07,0,-191.627	0/1:12:5,7:5:175:7:252:-19.3988,0,-12.4808	0/0:117:117,0:117:4121:0:0:0,-35.2205,-371.048	0/0:82:82,0:82:2860:0:0:0,-24.6845,-256.761	0/1:25:12,13:12:404:13:468:-34.9257,0,-29.1569	0/1:118:43,75:43:1513:75:2680:-205.643,0,-100.923	0/0:39:39,0:39:1296:0:0:0,-11.7402,-116.929	0/1:14:9,5:9:303:5:180:-12.3376,0,-23.3819	0/1:22:11,11:11:378:11:389:-28.706,0,-27.7277	0/1:83:40,43:40:1394:43:1533:-113.271,0,-100.769	0/0:57:57,0:57:1948:0:0:0,-17.1587,-175.57	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:199:199,0:199:6958:0:0:0,-59.905,-626.264	0/1:160:73,86:73:2531:86:3084:-229.568,0,-179.825	0/1:54:25,29:25:864:29:1044:-78.0146,0,-61.379	0/0:63:63,0:63:2173:0:0:0,-18.9649,-195.782	0/1:191:73,116:73:2558:116:4156:-316.875,0,-172.487	0/1:51:15,35:15:516:35:1252:-97.7269,0,-31.5008	0/1:12:8,4:8:281:4:144:-9.70126,0,-22.0134	0/1:49:20,29:20:708:29:1040:-79.1557,0,-49.2951	0/1:47:24,23:24:827:23:828:-60.6925,0,-59.7382	0/0:31:31,0:31:1076:0:0:0,-9.33193,-94.883	0/0:116:116,0:116:4002:0:0:0,-34.9195,-360.355	0/1:53:18,35:18:628:35:1242:-96.1195,0,-40.8913	0/0:137:136,0:136:4731:0:0:0,-40.9401,-425.719	0/0:189:189,0:189:6610:0:0:0,-56.8947,-593.91	0/1:113:47,66:47:1636:66:2372:-179.675,0,-113.503	0/1:99:35,64:35:1229:64:2304:-177.818,0,-81.1027	0/0:14:14,0:14:480:0:0:0,-4.21442,-43.5253	0/0:117:115,2:115:4008:2:72:0,-28.3838,-351.783	0/1:121:55,65:55:1909:65:2297:-170.587,0,-135.654	0/1:276:121,154:121:4226:154:5510:-412.669,0,-297.378	0/0:86:86,0:86:3000:0:0:0,-25.8886,-270.208	0/0:23:23,0:23:810:0:0:0,-6.92369,-73.2181	0/0:37:37,0:37:1272:0:0:0,-11.1381,-114.778	0/1:86:45,41:45:1540:41:1474:-107.064,0,-112.999	0/1:25:12,13:12:415:13:468:-34.9293,0,-30.1553	0/1:52:18,34:18:642:34:1220:-94.4451,0,-41.2616	0/0:30:30,0:30:1074:0:0:0,-9.0309,-95.5194	0/1:26:9,17:9:318:17:612:-47.5867,0,-20.9419	0/1:42:25,17:25:860:17:608:-42.3995,0,-65.0683	0/1:33:9,24:9:320:24:864:-68.1486,0,-19.2086	0/0:77:77,0:77:2700:0:0:0,-23.1793,-242.922	0/0:28:28,0:28:996:0:0:0,-8.42884,-89.9553
chr02	24233978	.	G	C	112977	PASS	AB=0.440567;ABP=152.459;AC=138;AF=0.734043;AN=188;AO=5574;CIGAR=1X;DP=8309;DPB=8309;DPRA=0;EPP=12106.8;EPPR=5933.3;GTI=4;LEN=1;MEANALT=1.04255;MQM=59.5651;MQMR=59.576;NS=94;NUMALT=1;ODDS=1.31182;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199121;QR=97828;RO=2731;RPL=5574;RPP=12106.8;RPPR=5933.3;RPR=0;RUN=1;SAF=0;SAP=12106.8;SAR=5574;SRF=0;SRP=5933.3;SRR=2731;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:41:0,40:0:0:40:1440:-129.53,-12.0412,0	1/1:98:0,98:0:0:98:3501:-315.288,-29.5009,0	0/1:130:88,42:88:3152:42:1512:-97.2244,0,-244.76	1/1:146:0,146:0:0:146:5213:-469.299,-43.9504,0	0/1:81:36,45:36:1269:45:1608:-120.609,0,-90.0712	0/1:90:37,53:37:1332:53:1896:-143.384,0,-93.0888	0/1:164:93,71:93:3332:71:2541:-179.565,0,-250.59	0/1:178:87,91:87:3112:91:3268:-240.705,0,-226.514	1/1:75:0,75:0:0:75:2669:-240.422,-22.5773,0	1/1:92:0,92:0:0:92:3285:-295.006,-27.6948,0	1/1:15:1,14:1:32:14:500:-42.1369,-1.31614,0	0/1:42:16,26:16:568:26:932:-71.4779,0,-38.8086	1/1:33:0,33:0:0:33:1175:-106.043,-9.93399,0	0/1:47:27,20:27:968:20:720:-50.9804,0,-73.2713	0/1:48:33,15:33:1184:15:540:-34.4824,0,-92.4189	0/1:32:17,15:17:612:15:540:-39.3036,0,-45.7759	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:33:0,33:0:0:33:1179:-106.401,-9.93399,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:240:125,115:125:4468:115:4128:-296.09,0,-329.262	1/1:112:0,112:0:0:112:3985:-358.777,-33.7154,0	1/1:184:0,184:0:0:184:6562:-590.657,-55.3895,0	0/1:130:79,51:79:2828:51:1832:-124.919,0,-215.51	1/1:115:0,115:0:0:115:4105:-369.594,-34.6185,0	1/1:57:0,57:0:0:57:2044:-184.213,-17.1587,0	1/1:384:5,379:5:180:379:13542:-1195.78,-99.0435,0	1/1:174:0,173:0:0:173:6149:-550.51,-52.0782,0	1/1:11:0,11:0:0:11:366:-33.2585,-3.31133,0	0/1:370:217,153:217:7769:153:5461:-380.214,0,-587.289	0/1:120:46,74:46:1637:74:2656:-203.158,0,-111.485	0/1:161:82,79:82:2936:79:2828:-206.206,0,-215.99	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.5996	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:4:0,4:0:0:4:144:-13.3052,-1.20412,0	1/1:11:0,11:0:0:11:396:-35.9125,-3.31133,0	0/1:14:12,2:12:432:2:72:-2.6223,0,-34.4964	0/1:85:47,38:47:1683:38:1349:-96.0637,0,-126.168	0/1:275:164,111:164:5849:111:3920:-270.133,0,-440.672	1/1:23:0,23:0:0:23:820:-74.1143,-6.92369,0	0/1:6:1,5:1:36:5:176:-14.3788,0,-1.79209	1/1:159:0,159:0:0:159:5651:-508.552,-47.8638,0	1/1:13:0,13:0:0:13:464:-42.0929,-3.91339,0	0/1:189:102,87:102:3644:87:3115:-223.67,0,-271.096	0/1:26:11,15:11:396:15:540:-41.1074,0,-28.1536	0/1:47:22,25:22:792:25:900:-67.1699,0,-57.4549	1/1:119:0,119:0:0:119:4242:-381.943,-35.8226,0	0/1:106:49,56:49:1756:56:2008:-147.477,0,-126.34	0/1:180:96,84:96:3452:84:3008:-216.745,0,-256.584	0/1:147:95,51:95:3412:51:1821:-120.004,0,-262.468	1/1:54:0,54:0:0:54:1924:-173.433,-16.2556,0	0/1:194:116,78:116:4160:78:2788:-192.704,0,-316.164	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.3988	1/1:117:0,117:0:0:117:4191:-377.338,-35.2205,0	1/1:82:0,82:0:0:82:2921:-262.266,-24.6845,0	0/1:25:13,12:13:468:12:428:-31.3331,0,-34.9257	0/1:117:74,43:74:2656:43:1529:-102.662,0,-204.056	1/1:39:0,39:0:0:39:1381:-124.581,-11.7402,0	0/1:15:6,9:6:216:9:324:-24.9904,0,-15.2751	0/1:19:11,8:11:396:8:288:-20.5478,0,-30.2632	0/1:84:44,40:44:1572:40:1436:-104.251,0,-116.478	1/1:55:0,55:0:0:55:1957:-176.305,-16.5567,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:198:0,198:0:0:198:7089:-638.006,-59.6039,0	0/1:159:87,72:87:3116:72:2554:-182.239,0,-232.762	0/1:54:30,24:30:1068:24:845:-60.1023,0,-80.1718	1/1:62:0,62:0:0:62:2220:-199.691,-18.6639,0	0/1:193:122,71:122:4380:71:2548:-171.469,0,-335.357	0/1:51:36,15:36:1292:15:536:-33.2176,0,-101.223	0/1:12:4,8:4:144:8:288:-22.6504,0,-9.70126	0/1:49:29,20:29:1040:20:716:-50.0172,0,-79.1557	0/1:46:23,23:23:824:23:828:-60.137,0,-60.6327	1/1:30:0,30:0:0:30:1065:-93.798,-9.0309,0	1/1:114:0,114:0:0:114:4040:-363.758,-34.3174,0	0/1:54:36,18:36:1292:18:648:-42.3963,0,-100.317	1/1:135:0,135:0:0:135:4840:-434.593,-40.6391,0	1/1:188:0,188:0:0:188:6714:-603.155,-56.5936,0	0/1:112:66,46:66:2372:46:1648:-114.883,0,-179.976	0/1:100:65,35:65:2332:35:1256:-83.2341,0,-180.036	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:116:2,114:2:68:114:4069:-358.854,-28.4618,0	0/1:119:65,54:65:2336:54:1940:-138.683,0,-174.584	0/1:282:161,121:161:5765:121:4318:-303.894,0,-433.8	1/1:86:0,86:0:0:86:3092:-278.475,-25.8886,0	1/1:23:0,23:0:0:23:824:-74.481,-6.92369,0	1/1:37:0,37:0:0:37:1313:-118.47,-11.1381,0	0/1:84:41,43:41:1472:43:1520:-111.804,0,-107.486	0/1:25:13,12:13:464:12:432:-31.6954,0,-34.5671	0/1:52:34,18:34:1224:18:644:-41.4422,0,-94.8053	1/1:29:0,29:0:0:29:1044:-92.8208,-8.72987,0	0/1:25:17,8:17:612:8:284:-18.2895,0,-47.8877	0/1:40:15,25:15:540:25:900:-69.2752,0,-36.8861	0/1:31:22,9:22:792:9:324:-20.1739,0,-62.2737	1/1:76:0,76:0:0:76:2728:-245.753,-22.8783,0	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0
chr02	24261018	.	GTTG	ATTG,ATTT	127500	PASS	AB=0.341935,0.399088;ABP=3366.69,779.158;AC=64,33;AF=0.340426,0.175532;AN=188;AO=5300,3502;CIGAR=1X3M,1X2M1X;DP=15500;DPB=15500;DPRA=0,0;EPP=11511.8,7607.51;EPPR=14456.3;GTI=3;LEN=1,4;MEANALT=1.87234,2.4186;MQM=59.9647,53.265;MQMR=59.6445;NS=94;NUMALT=2;ODDS=6.82331;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=188609,124122;QR=234971;RO=6656;RPL=0,0;RPP=11511.8,7607.51;RPPR=14456.3;RPR=5300,3502;RUN=1,1;SAF=5300,3502;SAP=11511.8,7607.51;SAR=0,0;SRF=6656;SRP=14456.3;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:18,13,0:18:642:13,0:449,0:-31.4056,0,-48.778,-36.8241,-52.6914,-89.1655	0/1:175:100,73,0:100:3500:73,0:2594,0:-181.414,0,-262.82,-211.517,-284.795,-496.174	0/1:188:87,101,0:87:3083:101,0:3606,0:-268.149,0,-221.105,-294.339,-251.509,-545.493	0/2:532:162,77,292:162:5711:77,292:2768,10395:-794.35,-617.311,-1059.02,0,-239.074,-376.98	0/2:171:61,27,82:61:2182:27,82:942,2915:-218.283,-160.034,-329.834,0,-101.321,-153.247	0/2:88:29,17,42:29:1040:17,42:612,1494:-112.687,-71.4791,-151.19,0,-34.8889,-72.1823	0/1:146:81,64,0:81:2874:64,0:2304,0:-163.69,0,-214.953,-188.073,-234.219,-422.216	0/1:186:103,81,2:103:3631:81,2:2912,65:-206.6,0,-271.153,-232.366,-290.296,-527.269	0/1:126:66,56,0:66:2343:56,0:1991,0:-142.377,0,-173.816,-162.245,-190.674,-352.923	0/1:105:69,36,0:69:2422:36,0:1292,0:-84.9756,0,-186.401,-105.747,-197.238,-302.629	0/1:101:44,57,0:44:1566:57,0:2029,0:-152.477,0,-110.821,-165.722,-127.979,-293.346	0/1:144:53,91,0:53:1870:91,0:3234,0:-247.931,0,-125.214,-263.886,-152.608,-416.14	0/1:112:47,64,0:47:1674:64,0:2277,0:-171.564,0,-117.311,-185.712,-136.577,-322.147	0/2:131:44,34,53:44:1552:34,53:1216,1863:-137.96,-52.0486,-168.187,0,-27.2138,-110.415	0/2:186:47,32,107:47:1679:32,107:1137,3815:-295.539,-217.066,-344.326,0,-44.2734,-104.683	0/2:141:45,36,59:45:1609:36,59:1281,2081:-155.129,-64.2801,-184.637,0,-26.7989,-113.431	0/1:78:34,42,1:34:1201:42,1:1485,36:-110.743,0,-85.127,-118.045,-94.8372,-215.483	0/2:131:40,23,68:40:1422:23,68:813,2405:-183.224,-129.053,-237.993,0,-49.6526,-95.394	0/1:112:55,57,0:55:1948:57,0:2014,0:-147.815,0,-141.857,-164.372,-159.015,-323.034	0/2:489:164,77,246:164:5783:77,246:2757,8764:-662.837,-487.378,-935.062,0,-246.031,-396.808	0/2:312:124,42,146:124:4391:42,146:1512,5184:-383.998,-297.953,-642.074,0,-233.386,-312.809	0/1:184:99,84,0:99:3525:84,0:2986,0:-213.522,0,-261.995,-243.324,-287.282,-530.609	0/1:84:51,33,0:51:1814:33,0:1176,0:-80.8531,0,-138.255,-96.2056,-148.189,-244.039	0/2:306:126,23,156:126:4428:23,156:828,5532:-411.169,-381.537,-734.636,0,-292.458,-313.059	0/1:98:59,39,0:59:2078:39,0:1359,0:-93.1013,0,-157.773,-110.862,-169.513,-280.026	0/1:346:194,152,0:194:6814:152,0:5366,0:-378.909,0,-508.87,-437.309,-554.627,-991.584	0/1:334:188,144,0:188:6617:144,0:5119,0:-360.549,0,-495.074,-417.143,-538.422,-955.571	0/1:59:22,37,0:22:773:37,0:1328,0:-102.061,0,-52.121,-108.684,-63.2591,-171.589	0/1:459:230,226,0:230:8163:226,0:8038,0:-585.836,0,-597.083,-655.073,-665.116,-1320.17	0/1:155:82,73,0:82:2912:73,0:2583,0:-186.055,0,-215.656,-210.74,-237.631,-448.016	0/2:187:70,32,85:70:2485:32,85:1133,3017:-224.342,-153.124,-345.885,0,-110.105,-176.807	0/1:17:9,8,0:9:321:8,0:288,0:-21.1499,0,-24.1113,-23.8592,-26.5195,-50.0204	0/1:28:13,15,0:13:462:15,0:521,0:-38.7875,0,-33.4877,-42.7009,-38.0032,-80.3525	0/1:11:3,8,0:3:108:8,0:288,0:-22.9561,0,-6.76384,-23.8592,-9.17208,-32.6714	0/1:9:7,1,1:7:252:1,1:36,36:-0.830463,0,-20.2613,-0.00510233,-17.6296,-20.266	0/2:20:10,3,7:10:360:3,7:108,250:-17.1854,-11.3817,-39.8561,0,-20.5619,-27.267	0/1:303:113,189,0:113:4026:189,0:6785,0:-519.447,0,-271.248,-553.463,-328.143,-881.609	0/2:409:174,68,166:174:6186:68,166:2398,5921:-428.173,-285.3,-768.714,0,-308.634,-453.915	1/2:170:41,46,82:41:1444:46,82:1641,2905:-239.46,-118.028,-221.727,-16.2305,0,-109.091	0/2:15:3,1,11:3:107:1,11:36,396:-30.8954,-28.8607,-37.2826,0,-5.78183,-5.40875	0/1:260:131,129,0:131:4600:129,0:4569,0:-333.106,0,-335.811,-372.54,-374.644,-746.832	0/1:81:38,43,0:38:1352:43,0:1514,0:-112.166,0,-97.5969,-123.605,-110.541,-233.792	0/1:195:116,79,0:116:4060:79,0:2824,0:-195.696,0,-306.884,-230.616,-330.665,-560.926	0/1:127:49,77,0:49:1736:77,0:2749,0:-209.362,0,-118.227,-224.112,-141.406,-365.522	0/2:166:51,42,73:51:1776:42,73:1512,2573:-193.422,-85.3999,-217.106,0,-20.9673,-122.369	0/1:96:56,40,0:56:1989:40,0:1436,0:-100.639,0,-150.361,-117.496,-162.402,-279.541	0/2:285:103,38,144:103:3628:38,144:1340,5091:-382.409,-304.309,-588.238,0,-186.262,-252.02	0/1:249:119,128,2:119:4210:128,2:4581,72:-337.739,0,-304.346,-367.692,-337.007,-709.971	0/1:145:76,69,0:76:2699:69,0:2464,0:-178.365,0,-199.497,-201.243,-220.268,-421.156	0/1:156:75,80,1:75:2640:80,1:2861,36:-210.707,0,-190.74,-230.351,-211.889,-444.877	0/1:272:177,94,0:177:6219:94,0:3369,0:-221.317,0,-477.706,-274.599,-506.003,-780.606	1/2:42:6,25,11:6:215:25,11:896,396:-85.9968,-14.7274,-24.7361,-55.5416,0,-69.7651	0/1:180:105,74,0:105:3707:74,0:2630,0:-182.75,0,-279.472,-21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chr02	24261041	.	AA	GA	57065.4	PASS	AB=0.48347;ABP=19.809;AC=34;AF=0.180851;AN=188;AO=3440;CIGAR=1X1M;DP=15475;DPB=15475;DPRA=1.65583;EPP=7446.84;EPPR=25744.9;GTI=3;LEN=1;MEANALT=1.13636;MQM=53.3276;MQMR=59.7624;NS=94;NUMALT=1;ODDS=0.674426;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123067;QR=414620;RO=12018;RPL=3437;RPP=7446.84;RPPR=25727.6;RPR=3;RUN=1;SAF=3440;SAP=7472.88;SAR=0;SRF=12016;SRP=26082.4;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:31:31,0:31:1033:0:0:0,-9.33193,-93.2681	0/0:174:174,0:174:5943:0:0:0,-52.3792,-534.943	0/0:188:188,0:188:6522:0:0:0,-56.5936,-587.084	0/1:526:238,288:238:8123:288:10285:-763.977,0,-572.625	0/1:170:89,81:89:2996:81:2889:-208.188,0,-218.693	0/1:88:46,42:46:1597:42:1492:-107.748,0,-117.526	0/0:149:149,0:149:5095:0:0:0,-44.8535,-458.701	0/0:187:185,2:185:6360:2:72:0,-49.4656,-565.56	0/0:126:126,0:126:4315:0:0:0,-37.9298,-388.307	0/0:105:104,0:104:3581:0:0:0,-31.3071,-321.889	0/0:103:103,0:103:3589:0:0:0,-31.0061,-323.211	0/0:143:143,0:143:5018:0:0:0,-43.0473,-451.748	0/0:113:113,0:113:3997:0:0:0,-34.0164,-359.909	0/1:129:78,51:78:2721:51:1805:-123.512,0,-206.298	0/1:182:78,104:78:2745:104:3729:-279.929,0,-192.479	0/1:139:81,58:81:2844:58:2060:-142.779,0,-214.346	0/0:79:78,1:78:2745:1:36:0,-20.1882,-243.365	0/1:132:64,68:64:2239:68:2436:-179.091,0,-162.019	0/0:113:112,0:112:3945:0:0:0,-33.7154,-354.864	0/1:484:242,241:242:8257:241:8612:-627.453,0,-597.417	0/1:308:165,143:165:5484:143:5112:-366.402,0,-400.007	0/0:186:186,0:186:6348:0:0:0,-55.9916,-570.921	0/0:84:84,0:84:2954:0:0:0,-25.2865,-266.088	0/1:302:147,155:147:5004:155:5546:-406.372,0,-359.167	0/0:99:99,0:99:3307:0:0:0,-29.802,-297.837	0/0:345:345,0:345:11882:0:0:0,-103.855,-1069.04	0/0:336:336,0:336:11525:0:0:0,-101.146,-1036.84	0/0:59:59,0:59:2096:0:0:0,-17.7608,-188.901	0/0:461:460,1:460:15893:1:36:0,-135.177,-1426.35	0/0:158:158,0:158:5467:0:0:0,-47.5627,-492.161	0/1:186:103,83:103:3574:83:2976:-211.667,0,-265.619	0/0:17:17,0:17:606:0:0:0,-5.11751,-54.8687	0/0:28:28,0:28:964:0:0:0,-8.42884,-87.0686	0/0:11:11,0:11:374:0:0:0,-3.31133,-33.9866	0/1:9:8,1:8:284:1:36:-0.883903,0,-23.1943	0/1:20:13,7:13:448:7:252:-16.8207,0,-34.6284	0/0:306:306,0:306:10632:0:0:0,-92.1152,-956.809	0/1:406:240,164:240:8226:164:5869:-405.131,0,-618.176	0/1:170:86,84:86:3048:84:3003:-218.077,0,-223.354	0/1:15:4,8:4:129:8:288:-22.2708,0,-7.9826	0/0:261:261,0:261:8891:0:0:0,-78.5688,-799.161	0/0:82:82,0:82:2886:0:0:0,-24.6845,-259.976	0/0:194:193,0:193:6684:0:0:0,-58.0988,-601.322	0/0:126:125,0:125:4410:0:0:0,-37.6287,-396.702	0/1:165:94,71:94:3292:71:2533:-177.618,0,-246.687	0/0:98:98,0:98:3361:0:0:0,-29.5009,-302.5	0/1:284:141,143:141:4948:143:5140:-375.98,0,-359.985	0/0:248:247,1:247:8551:1:36:0,-71.0623,-766.001	0/0:147:147,0:147:4973:0:0:0,-44.2514,-447.733	0/0:154:153,1:153:5233:1:36:0,-42.7654,-467.332	0/0:271:271,0:271:9235:0:0:0,-81.5791,-830.84	0/1:43:32,11:32:1106:11:396:-22.9874,0,-86.9003	0/0:180:180,0:180:6130:0:0:0,-54.1854,-551.499	0/0:38:38,0:38:1287:0:0:0,-11.4391,-116.04	0/0:29:29,0:29:980:0:0:0,-8.72987,-88.5016	0/1:346:173,173:173:5826:173:6200:-452.108,0,-420.308	0/1:95:46,49:46:1586:49:1745:-128.278,0,-114.426	0/1:24:9,15:9:320:15:536:-41.2656,0,-21.9178	0/0:16:16,0:16:535:0:0:0,-4.81648,-48.466	0/0:80:80,0:80:2779:0:0:0,-24.0824,-250.35	0/1:257:158,99:158:5531:99:3543:-240.827,0,-420.523	0/0:9:9,0:9:316:0:0:0,-2.70927,-28.7793	0/0:276:273,1:273:9283:1:36:0,-79.2334,-831.518	0/1:387:199,188:199:6941:188:6752:-490.111,0,-508.274	0/0:105:98,7:98:3385:7:252:0,-8.61184,-281.874	0/0:118:118,0:118:4043:0:0:0,-35.5215,-364.066	0/1:249:134,115:134:4614:115:4112:-293.994,0,-340.311	0/0:162:161,0:161:5550:0:0:0,-48.4658,-498.907	0/0:34:34,0:34:1196:0:0:0,-10.235,-107.925	0/0:111:111,0:111:3757:0:0:0,-33.4143,-338.295	0/1:147:81,66:81:2806:66:2376:-169.483,0,-208.529	0/0:20:20,0:20:677:0:0:0,-6.0206,-61.2445	0/0:180:180,0:180:6245:0:0:0,-54.1854,-562.097	0/1:92:38,54:38:1281:54:1944:-147.005,0,-87.8876	0/0:197:197,0:197:6697:0:0:0,-59.3029,-602.085	0/0:281:277,2:277:9425:2:72:0,-77.5199,-841.422	0/0:152:150,1:150:5294:1:36:0,-42.2219,-473.01	0/0:156:155,1:155:5384:1:36:0,-43.3675,-481.112	0/0:20:20,0:20:690:0:0:0,-6.0206,-62.4184	0/0:209:209,0:209:7050:0:0:0,-62.9153,-634.586	0/1:265:164,101:164:5656:101:3625:-245.797,0,-429.392	0/1:498:220,278:220:7531:278:9909:-737.467,0,-527.92	0/0:174:173,0:173:6101:0:0:0,-52.0782,-548.904	0/0:102:102,0:102:3584:0:0:0,-30.7051,-322.763	0/1:195:108,87:108:3776:87:3115:-220.434,0,-281.28	0/1:316:156,160:156:5478:160:5730:-419.195,0,-397.644	0/1:100:54,46:54:1916:46:1656:-118.555,0,-142.612	0/0:140:140,0:140:4918:0:0:0,-42.1442,-442.574	0/0:120:120,0:120:4222:0:0:0,-36.1236,-380.115	0/0:59:59,0:59:2071:0:0:0,-17.7608,-186.656	0/1:197:100,97:100:3488:97:3473:-252.667,0,-254.727	0/1:152:61,91:61:2148:91:3244:-245.626,0,-147.828	0/0:103:103,0:103:3595:0:0:0,-31.0061,-323.709	0/0:144:144,0:144:5048:0:0:0,-43.3483,-454.469
chr02	24325791	.	G	C	16823.9	PASS	AB=0.288778;ABP=1322.12;AC=39;AF=0.207447;AN=188;AO=1028;CIGAR=1X;DP=9384;DPB=9384;DPRA=0.82369;EPP=25.8572;EPPR=18139.1;GTI=10;LEN=1;MEANALT=1.04082;MQM=60;MQMR=59.996;NS=94;NUMALT=1;ODDS=0.475017;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=36422;QR=296866;RO=8352;RPL=1028;RPP=2235.28;RPPR=18139.1;RPR=0;RUN=1;SAF=462;SAP=25.8572;SAR=566;SRF=8352;SRP=18139.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/0:83:82,1:82:2900:1:36:0,-21.3872,-257.637	0/1:148:126,22:126:4500:22:788:-26.6924,0,-360.617	0/0:368:368,0:368:13072:0:0:0,-110.779,-1176.3	0/1:33:23,10:23:794:10:356:-22.4473,0,-61.8393	0/1:44:36,8:36:1271:8:273:-11.6549,0,-101.447	0/1:153:138,15:138:4895:15:536:-2.51723,0,-394.646	0/1:124:106,18:106:3751:18:648:-21.3242,0,-300.466	0/0:211:211,0:211:7488:0:0:0,-63.5173,-673.967	0/0:150:150,0:150:5356:0:0:0,-45.1545,-482.174	0/0:33:33,0:33:1169:0:0:0,-9.93399,-105.515	0/1:104:39,65:39:1383:65:2279:-174.063,0,-93.4609	0/0:63:63,0:63:2197:0:0:0,-18.9649,-197.992	0/1:84:35,49:35:1252:49:1749:-132.406,0,-87.6986	0/1:80:33,47:33:1171:47:1672:-126.685,0,-81.6143	0/1:72:22,50:22:788:50:1758:-136.828,0,-49.5706	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.416	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.701	0/0:19:19,0:19:671:0:0:0,-5.71957,-60.7158	0/0:201:188,13:188:6740:13:464:0,-18.4095,-564.575	0/0:216:216,0:216:7639:0:0:0,-65.0225,-687.554	0/0:107:107,0:107:3809:0:0:0,-32.2102,-343.008	0/1:106:84,22:84:3004:22:788:-39.3356,0,-238.683	0/0:177:177,0:177:6298:0:0:0,-53.2823,-566.907	0/0:109:109,0:109:3848:0:0:0,-32.8123,-346.516	0/0:295:295,0:295:10474:0:0:0,-88.8038,-942.584	0/0:221:220,0:220:7815:0:0:0,-66.2266,-703.024	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:197:194,3:194:6926:3:108:0,-49.2277,-613.333	0/1:102:90,12:90:3212:12:417:-7.15516,0,-258.598	0/1:139:115,24:115:4086:24:843:-34.3448,0,-326.085	0/1:8:7,1:7:252:1:32:-0.791073,0,-20.6207	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6906	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:147:65,82:65:2312:82:2927:-219.413,0,-164.09	0/0:62:61,0:61:2151:0:0:0,-18.3628,-193.495	0/0:26:26,0:26:919:0:0:0,-7.82678,-83.0262	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:272:272,0:272:9635:0:0:0,-81.8802,-867.11	0/0:19:19,0:19:671:0:0:0,-5.71957,-60.7158	0/1:141:121,20:121:4306:20:716:-22.3225,0,-345.273	0/1:70:35,35:35:1240:35:1252:-91.913,0,-90.8324	0/1:58:21,37:21:743:37:1324:-102.002,0,-49.7336	0/0:135:135,0:135:4820:0:0:0,-40.639,-433.957	0/1:101:89,12:89:3136:12:432:-8.81717,0,-252.063	0/1:134:107,27:107:3820:27:943:-44.8452,0,-303.66	0/1:45:37,8:37:1296:8:271:-11.1731,0,-103.392	0/0:142:142,0:142:5067:0:0:0,-42.7463,-456.173	0/1:81:72,9:72:2572:9:316:-4.39543,0,-207.347	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:149:149,0:149:5277:0:0:0,-44.8535,-475.068	0/0:172:172,0:172:6110:0:0:0,-51.7772,-550.003	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:122:106,16:106:3771:16:568:-14.7262,0,-302.865	0/0:86:85,1:85:3011:1:36:0,-22.2903,-267.625	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:15:14,1:14:500:1:32:0,-1.31614,-42.1369	0/0:68:63,5:63:2248:5:180:0,-3.91797,-186.031	0/0:70:69,1:69:2462:1:36:0,-17.4738,-218.235	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:252:252,0:252:8941:0:0:0,-75.8596,-804.676	0/1:161:137,24:137:4824:24:841:-27.5405,0,-385.85	0/1:54:47,7:47:1676:7:252:-6.77334,0,-134.872	0/0:154:154,0:154:5468:0:0:0,-46.3586,-492.248	0/1:172:154,17:154:5491:17:595:-2.04128,0,-442.483	0/1:89:70,19:70:2486:19:680:-34.7375,0,-197.201	0/1:36:18,18:18:644:18:629:-46.0967,0,-47.4535	0/1:86:76,10:76:2711:10:360:-6.85572,0,-218.345	0/1:41:14,27:14:504:27:956:-74.0135,0,-33.3559	0/0:35:35,0:35:1248:0:0:0,-10.536,-112.625	0/0:117:117,0:117:4147:0:0:0,-35.2205,-373.414	0/1:56:44,12:44:1563:12:417:-21.0025,0,-124.103	0/0:260:260,0:260:9240:0:0:0,-78.2678,-831.573	0/0:250:250,0:250:8907:0:0:0,-75.2575,-801.616	0/1:31:22,9:22:788:9:324:-20.1739,0,-61.9129	0/0:118:111,6:111:3944:6:212:0,-16.1546,-335.726	0/0:22:22,0:22:775:0:0:0,-6.62266,-70.0712	0/0:199:199,0:199:7086:0:0:0,-59.905,-637.801	0/0:134:121,13:121:4259:13:444:0,-0.0539502,-343.209	0/1:208:175,33:175:6263:33:1157:-41.8202,0,-501.15	0/0:38:38,0:38:1328:0:0:0,-11.4391,-119.817	0/0:61:60,1:60:2160:1:36:0,-14.7646,-191.068	0/0:54:54,0:54:1907:0:0:0,-16.2556,-171.907	0/1:127:71,56:71:2528:56:1987:-140.873,0,-189.541	0/1:18:10,8:10:360:8:284:-20.4848,0,-27.3258	0/1:67:23,44:23:824:44:1576:-121.963,0,-54.3143	0/0:56:56,0:56:1989:0:0:0,-16.8577,-179.282	0/1:37:5,32:5:180:32:1117:-89.6973,0,-5.41395	0/1:53:16,37:16:568:37:1307:-101.976,0,-35.4973	0/1:66:27,39:27:964:39:1396:-106.071,0,-67.2088	0/0:258:258,0:258:9189:0:0:0,-77.6657,-826.984	0/0:80:80,0:80:2852:0:0:0,-24.0824,-256.919
chr02	24468965	.	G	A	60161.9	PASS	AB=0.497417;ABP=3.42531;AC=53;AF=0.281915;AN=188;AO=3571;CIGAR=1X;DP=12355;DPB=12355;DPRA=1.25902;EPP=7757.34;EPPR=19062;GTI=0;LEN=1;MEANALT=1.08772;MQM=59.9154;MQMR=59.9731;NS=94;NUMALT=1;ODDS=5.43343;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=127571;QR=313314;RO=8777;RPL=0;RPP=7757.34;RPPR=19062;RPR=3571;RUN=1;SAF=3571;SAP=7757.34;SAR=0;SRF=8777;SRP=19062;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:51:51,0:51:1813:0:0:0,-15.3525,-163.45	0/0:241:238,2:238:8472:2:72:0,-65.7703,-755.643	0/1:152:63,89:63:2264:89:3184:-241.01,0,-158.266	0/0:205:204,1:204:7309:1:36:0,-58.1129,-654.259	0/1:84:42,42:42:1500:42:1508:-110.728,0,-110.008	0/1:96:39,57:39:1381:57:2048:-155.693,0,-95.6879	0/1:201:102,99:102:3649:99:3520:-256.502,0,-268.106	0/1:239:114,125:114:4054:125:4453:-328.993,0,-293.1	0/1:129:69,60:69:2430:60:2152:-155.114,0,-180.121	0/1:173:68,105:68:2444:105:3746:-285.259,0,-168.119	0/0:72:72,0:72:2588:0:0:0,-21.6742,-233.168	0/1:93:36,57:36:1283:57:2043:-156.146,0,-87.7768	0/0:84:84,0:84:2997:0:0:0,-25.2865,-269.961	0/1:195:106,89:106:3789:89:3204:-229.749,0,-282.506	0/1:70:36,34:36:1296:34:1224:-89.3949,0,-95.8718	0/1:76:43,32:43:1544:32:1144:-80.332,0,-116.316	0/0:128:128,0:128:4563:0:0:0,-38.5318,-410.835	0/0:98:98,0:98:3509:0:0:0,-29.5009,-316.018	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.709	0/1:183:98,85:98:3512:85:2987:-213.971,0,-261.201	0/0:183:183,0:183:6473:0:0:0,-55.0885,-582.632	0/0:163:163,0:163:5812:0:0:0,-49.0679,-522.824	0/1:69:44,25:44:1584:25:892:-59.8286,0,-122.08	0/0:160:160,0:160:5729:0:0:0,-48.1648,-515.408	0/0:117:117,0:117:4150:0:0:0,-35.2205,-373.683	0/0:353:350,3:350:12466:3:108:0,-96.1884,-1111.7	0/0:261:261,0:261:9306:0:0:0,-78.5688,-836.405	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/1:250:138,112:138:4937:112:3967:-281.954,0,-369.221	0/1:259:132,127:132:4721:127:4552:-331.853,0,-347.081	0/1:198:93,105:93:3306:105:3741:-277.284,0,-238.153	0/1:17:8,9:8:284:9:324:-24.3883,0,-20.7858	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:14:10,4:10:356:4:144:-9.0992,0,-28.1668	0/1:232:116,116:116:4168:116:4145:-303.39,0,-305.462	0/1:330:182,148:182:6491:148:5304:-378.154,0,-484.932	0/1:88:43,45:43:1544:45:1612:-118.879,0,-112.762	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:167:167,0:167:5996:0:0:0,-50.272,-539.699	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/1:180:97,83:97:3453:83:2965:-212.896,0,-256.797	0/1:71:38,33:38:1364:33:1188:-85.8555,0,-101.688	0/1:85:54,31:54:1913:31:1104:-74.0371,0,-146.858	0/0:92:92,0:92:3285:0:0:0,-27.6948,-295.868	0/1:195:98,97:98:3520:97:3484:-255.032,0,-258.308	0/1:216:109,107:109:3904:107:3802:-277.222,0,-286.531	0/1:142:82,60:82:2936:60:2152:-151.201,0,-221.728	0/0:216:216,0:216:7710:0:0:0,-65.0225,-693.918	0/1:149:68,81:68:2440:81:2874:-214.033,0,-174.932	0/1:13:4,9:4:144:9:309:-24.2273,0,-9.40023	0/0:212:212,0:212:7586:0:0:0,-63.8184,-682.775	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/1:33:18,15:18:644:15:536:-38.6408,0,-48.3566	0/1:156:86,70:86:3077:70:2481:-176.452,0,-230.196	0/0:30:29,0:29:1036:0:0:0,-8.72987,-93.1942	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/1:48:26,22:26:913:22:777:-55.8009,0,-68.0346	0/1:140:66,74:66:2372:74:2636:-195.34,0,-171.593	0/0:190:188,2:188:6732:2:72:0,-50.359,-599.115	0/0:13:13,0:13:453:0:0:0,-3.91339,-41.0996	0/0:170:170,0:170:6044:0:0:0,-51.1751,-544.061	0/1:303:174,128:174:6210:128:4581:-321.272,0,-467.873	0/1:148:71,77:71:2537:77:2757:-203.817,0,-184.027	0/0:96:96,0:96:3452:0:0:0,-28.8989,-310.891	0/1:123:54,69:54:1917:69:2471:-185.616,0,-135.779	0/1:161:56,105:56:1993:105:3753:-289.5,0,-131.176	0/1:48:24,24:24:845:24:864:-63.6331,0,-61.9177	0/1:124:57,67:57:2006:67:2389:-177.933,0,-143.482	0/1:157:88,69:88:3164:69:2476:-175.832,0,-237.722	0/0:39:39,0:39:1347:0:0:0,-11.7402,-121.522	0/0:169:169,0:169:6030:0:0:0,-50.8741,-542.802	0/1:105:49,56:49:1741:56:1996:-148.283,0,-125.364	0/0:400:400,0:400:14221:0:0:0,-120.412,-1279.16	0/0:158:158,0:158:5646:0:0:0,-47.5627,-508.258	0/1:208:87,121:87:3094:121:4321:-326.407,0,-216.071	0/1:211:112,97:112:3994:97:3454:-247.793,0,-296.372	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:139:139,0:139:4950:0:0:0,-41.8432,-445.642	0/1:203:111,92:111:3961:92:3297:-235.838,0,-295.571	0/1:214:111,102:111:3988:102:3649:-264.133,0,-294.629	0/0:121:121,0:121:4321:0:0:0,-36.4246,-389.065	0/0:98:98,0:98:3520:0:0:0,-29.5009,-317.009	0/0:141:141,0:141:5028:0:0:0,-42.4452,-452.666	0/1:171:97,74:97:3475:74:2648:-187.09,0,-261.485	0/1:31:14,17:14:504:17:608:-45.7201,0,-36.3662	0/1:103:42,61:42:1497:61:2188:-166.178,0,-104.016	0/0:90:90,0:90:3194:0:0:0,-27.0927,-287.682	0/1:94:37,57:37:1328:57:2048:-156.295,0,-91.5254	0/1:109:54,55:54:1929:55:1961:-143.953,0,-141.072	0/1:62:22,40:22:788:40:1440:-111.234,0,-52.5809	0/0:96:96,0:96:3384:0:0:0,-28.8989,-304.772	0/0:129:129,0:129:4616:0:0:0,-38.8329,-415.604
chr02	24468973	.	T	C	60143.4	PASS	AB=0.497343;ABP=3.44885;AC=53;AF=0.281915;AN=188;AO=3565;CIGAR=1X;DP=12309;DPB=12309;DPRA=1.26857;EPP=7744.31;EPPR=18977.3;GTI=0;LEN=1;MEANALT=1.0339;MQM=59.9021;MQMR=59.9849;NS=94;NUMALT=1;ODDS=5.30405;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=127475;QR=313023;RO=8742;RPL=0;RPP=7744.31;RPPR=18977.3;RPR=3565;RUN=1;SAF=3565;SAP=7744.31;SAR=0;SRF=8742;SRP=18986;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:51:51,0:51:1816:0:0:0,-15.3525,-163.721	0/0:234:232,1:232:8327:1:36:0,-66.8266,-745.91	0/1:157:66,91:66:2364:91:3239:-244.447,0,-165.757	0/0:202:201,1:201:7170:1:36:0,-57.2098,-641.758	0/1:83:40,43:40:1432:43:1544:-114.268,0,-104.192	0/1:97:40,57:40:1423:57:2040:-154.672,0,-99.1668	0/1:202:103,99:103:3679:99:3532:-257.282,0,-270.505	0/1:236:111,125:111:3968:125:4492:-333.393,0,-286.268	0/1:130:70,60:70:2507:60:2156:-155.173,0,-186.748	0/1:175:70,105:70:2503:105:3756:-285.472,0,-172.839	0/0:72:72,0:72:2588:0:0:0,-21.6742,-233.168	0/1:92:35,57:35:1233:57:2048:-156.897,0,-83.5773	0/0:86:86,0:86:3088:0:0:0,-25.8886,-278.147	0/1:197:110,87:110:3948:87:3080:-217.993,0,-296.208	0/1:71:36,35:36:1292:35:1247:-91.1609,0,-95.2106	0/1:76:46,30:46:1648:30:1067:-73.4629,0,-125.73	0/0:130:130,0:130:4668:0:0:0,-39.1339,-420.28	0/0:101:101,0:101:3615:0:0:0,-30.404,-325.555	0/0:57:57,0:57:2052:0:0:0,-17.1587,-184.951	0/1:184:99,85:99:3540:85:3030:-217.539,0,-263.42	0/0:182:182,0:182:6500:0:0:0,-54.7875,-584.877	0/0:161:160,1:160:5748:1:36:0,-45.2782,-514.246	0/1:69:44,25:44:1565:25:896:-60.1893,0,-120.369	0/0:157:157,0:157:5632:0:0:0,-47.2617,-506.682	0/0:112:112,0:112:3983:0:0:0,-33.7154,-358.66	0/0:355:352,3:352:12588:3:108:0,-96.7905,-1122.66	0/0:260:260,0:260:9296:0:0:0,-78.2678,-836.606	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/1:250:139,111:139:4973:111:3978:-282.943,0,-372.46	0/1:259:131,127:131:4700:127:4556:-332.307,0,-345.282	0/1:198:93,105:93:3324:105:3744:-277.555,0,-239.775	0/1:17:8,9:8:284:9:324:-24.3883,0,-20.7858	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:235:118,117:118:4236:117:4183:-305.905,0,-310.676	0/1:330:184,146:184:6587:146:5232:-371.677,0,-493.57	0/1:88:43,45:43:1544:45:1616:-119.239,0,-112.762	0/1:4:1,3:1:36:3:104:-8.49868,0,-2.39415	0/0:168:168,0:168:6028:0:0:0,-50.573,-542.578	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/1:180:96,84:96:3435:84:2995:-215.596,0,-255.177	0/1:72:39,33:39:1400:33:1188:-85.5544,0,-104.625	0/1:84:53,31:53:1896:31:1107:-74.6323,0,-145.632	0/0:93:93,0:93:3320:0:0:0,-27.9958,-299.019	0/1:189:94,95:94:3360:95:3387:-248.131,0,-245.722	0/1:217:108,109:108:3876:109:3902:-285.914,0,-283.71	0/1:142:80,62:80:2876:62:2224:-157.678,0,-216.33	0/0:217:217,0:217:7772:0:0:0,-65.3235,-699.507	0/1:148:67,81:67:2385:81:2899:-216.585,0,-170.354	0/1:14:4,10:4:129:10:356:-28.1668,0,-7.71324	0/0:212:212,0:212:7612:0:0:0,-63.8184,-685.114	0/0:64:64,0:64:2300:0:0:0,-19.2659,-207.261	0/1:33:19,14:19:684:14:504:-35.7641,0,-51.9563	0/1:158:86,72:86:3072:72:2575:-184.307,0,-229.132	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6706	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/1:46:24,22:24:860:22:792:-57.7583,0,-63.8745	0/1:141:67,74:67:2408:74:2644:-195.757,0,-174.531	0/0:187:185,2:185:6643:2:72:0,-49.4559,-591.108	0/0:13:13,0:13:449:0:0:0,-3.91339,-40.7375	0/0:167:167,0:167:5957:0:0:0,-50.272,-536.235	0/1:300:171,129:171:6127:129:4612:-324.876,0,-461.22	0/1:148:71,77:71:2552:77:2768:-204.808,0,-185.378	0/0:97:97,0:97:3480:0:0:0,-29.1999,-313.411	0/1:122:54,68:54:1944:68:2421:-181.419,0,-138.51	0/1:161:55,106:55:1964:106:3766:-290.674,0,-128.569	0/1:48:24,24:24:864:24:860:-63.2724,0,-63.6331	0/1:120:54,66:54:1920:66:2351:-175.721,0,-136.954	0/1:156:88,68:88:3140:68:2423:-171.364,0,-235.863	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.701	0/0:164:164,0:164:5875:0:0:0,-49.3689,-528.859	0/1:103:47,56:47:1688:56:2001:-149.349,0,-121.201	0/0:394:394,0:394:14088:0:0:0,-118.606,-1267.69	0/0:155:155,0:155:5556:0:0:0,-46.6596,-500.163	0/1:202:85,117:85:3052:117:4188:-316.253,0,-214.101	0/1:216:118,98:118:4217:98:3520:-251.984,0,-314.687	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:136:136,0:136:4867:0:0:0,-40.9401,-438.175	0/1:201:110,91:110:3929:91:3255:-232.663,0,-293.294	0/1:213:112,101:112:3974:101:3607:-260.717,0,-293.731	0/0:121:121,0:121:4352:0:0:0,-36.4246,-391.853	0/0:98:97,1:97:3488:1:36:0,-25.9027,-310.531	0/0:141:141,0:141:5064:0:0:0,-42.4452,-455.903	0/1:172:98,74:98:3520:74:2648:-186.789,0,-265.232	0/1:28:12,16:12:432:16:567:-42.9319,0,-30.7924	0/1:101:41,60:41:1472:60:2148:-163.182,0,-102.372	0/0:92:92,0:92:3292:0:0:0,-27.6948,-296.499	0/1:93:37,56:37:1328:56:2004:-152.638,0,-91.8264	0/1:108:54,54:54:1944:54:1936:-142.005,0,-142.725	0/1:62:22,40:22:792:40:1423:-109.703,0,-52.9418	0/0:95:95,0:95:3391:0:0:0,-28.5978,-305.405	0/0:128:128,0:128:4600:0:0:0,-38.5318,-414.162
chr02	24468979	.	G	A	60705.9	PASS	AB=0.498462;ABP=3.15725;AC=53;AF=0.281915;AN=188;AO=3573;CIGAR=1X;DP=12293;DPB=12293;DPRA=1.26999;EPP=7753;EPPR=18814.6;GTI=0;LEN=1;MEANALT=1.10526;MQM=59.9113;MQMR=59.9867;NS=94;NUMALT=1;ODDS=4.90533;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128088;QR=311653;RO=8711;RPL=1;RPP=7753;RPPR=18814.6;RPR=3572;RUN=1;SAF=3573;SAP=7761.68;SAR=0;SRF=8711;SRP=18918.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:51:51,0:51:1828:0:0:0,-15.3525,-164.801	0/0:239:236,2:236:8464:2:72:0,-65.1682,-754.923	0/1:155:66,89:66:2345:89:3185:-240.212,0,-164.648	0/0:203:202,1:202:7228:1:36:0,-57.5108,-646.973	0/1:83:40,43:40:1436:43:1531:-113.097,0,-104.552	0/1:95:39,56:39:1400:56:2012:-152.755,0,-97.7013	0/1:202:102,99:102:3652:99:3564:-260.099,0,-268.017	0/1:234:111,123:111:3946:123:4420:-327.525,0,-284.89	0/1:131:71,60:71:2543:60:2160:-155.232,0,-189.685	0/1:172:67,105:67:2389:105:3769:-287.543,0,-163.471	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.692	0/1:94:38,56:38:1352:56:2016:-153.416,0,-93.6835	0/0:85:85,0:85:3056:0:0:0,-25.5875,-275.268	0/1:193:103,90:103:3672:90:3236:-233.23,0,-272.583	0/1:71:35,35:35:1260:35:1245:-90.9209,0,-92.2736	0/1:78:46,32:46:1648:32:1148:-80.1495,0,-125.128	0/0:129:129,0:129:4628:0:0:0,-38.8329,-416.682	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.247	0/0:58:58,0:58:2088:0:0:0,-17.4597,-188.19	0/1:183:96,86:96:3437:86:3084:-222.679,0,-254.433	0/0:184:184,0:184:6574:0:0:0,-55.3895,-591.722	0/0:157:157,0:157:5636:0:0:0,-47.2617,-507.359	0/1:70:44,26:44:1584:26:936:-63.4874,0,-121.779	0/0:159:159,0:159:5672:0:0:0,-47.8638,-510.599	0/0:112:112,0:112:4009:0:0:0,-33.7154,-360.997	0/0:350:347,3:347:12413:3:108:0,-95.2853,-1106.93	0/0:255:255,0:255:9141:0:0:0,-76.7626,-821.557	0/0:45:45,0:45:1611:0:0:0,-13.5463,-145.279	0/1:248:137,111:137:4904:111:3975:-283.273,0,-366.856	0/1:259:132,127:132:4737:127:4549:-331.598,0,-348.518	0/1:199:94,105:94:3349:105:3757:-278.423,0,-241.721	0/1:17:8,9:8:284:9:324:-24.3883,0,-20.7858	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.282	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:234:118,116:118:4236:116:4164:-304.496,0,-310.977	0/1:328:180,148:180:6449:148:5324:-380.553,0,-481.756	0/1:89:43,46:43:1531:46:1656:-122.537,0,-111.291	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:169:169,0:169:6057:0:0:0,-50.8741,-545.185	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:178:97,81:97:3446:81:2874:-205.311,0,-256.768	0/1:72:39,32:39:1400:32:1152:-82.2572,0,-104.566	0/1:82:52,30:52:1856:30:1080:-72.7827,0,-142.635	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.937	0/1:192:96,96:96:3428:96:3441:-252.065,0,-250.937	0/1:219:110,109:110:3910:109:3895:-284.758,0,-286.167	0/1:143:81,62:81:2893:62:2212:-156.297,0,-217.557	0/0:217:217,0:217:7773:0:0:0,-65.3235,-699.559	0/1:148:68,80:68:2440:80:2880:-214.883,0,-175.233	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/0:206:205,0:205:7345:0:0:0,-61.7111,-660.736	0/0:65:65,0:65:2291:0:0:0,-19.5669,-206.447	0/1:34:19,15:19:680:15:540:-38.7015,0,-51.2941	0/1:156:84,72:84:3005:72:2577:-185.087,0,-223.719	0/0:31:31,0:31:1089:0:0:0,-9.33193,-98.3173	0/1:8:6,2:6:201:2:72:-4.42848,0,-16.0088	0/1:46:24,22:24:864:22:792:-57.7583,0,-64.2352	0/1:139:66,73:66:2372:73:2590:-191.502,0,-171.895	0/0:191:189,2:189:6792:2:72:0,-50.66,-604.512	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:171:170,0:170:6073:0:0:0,-51.1751,-546.402	0/1:301:173,128:173:6147:128:4580:-321.729,0,-462.719	0/1:147:70,77:70:2500:77:2772:-205.469,0,-181.002	0/0:95:95,0:95:3396:0:0:0,-28.5978,-305.855	0/1:122:53,69:53:1904:69:2479:-186.637,0,-134.912	0/1:162:56,106:56:2008:106:3795:-292.969,0,-132.226	0/1:49:24,25:24:856:25:896:-66.2099,0,-62.6106	0/1:124:57,67:57:2006:67:2404:-179.284,0,-143.482	0/1:155:87,68:87:3117:68:2429:-172.204,0,-234.095	0/0:38:38,0:38:1349:0:0:0,-11.4391,-121.708	0/0:163:163,0:163:5808:0:0:0,-49.0679,-522.833	0/1:103:48,55:48:1705:55:1946:-144.403,0,-122.728	0/0:396:395,0:395:14113:0:0:0,-118.907,-1269.72	0/0:155:155,0:155:5568:0:0:0,-46.6596,-501.241	0/1:202:85,117:85:3022:117:4174:-314.989,0,-211.4	0/1:214:115,99:115:4120:99:3545:-254.834,0,-306.564	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:135:135,0:135:4824:0:0:0,-40.639,-434.313	0/1:202:110,92:110:3925:92:3304:-236.77,0,-292.634	0/1:217:113,104:113:4018:104:3736:-271.116,0,-296.484	0/0:123:123,0:123:4416:0:0:0,-37.0267,-397.611	0/0:97:97,0:97:3488:0:0:0,-29.1999,-314.13	0/0:138:138,0:138:4952:0:0:0,-41.5421,-445.828	0/1:172:98,74:98:3507:74:2664:-188.228,0,-264.063	0/1:31:13,18:13:464:18:644:-48.9587,0,-32.7656	0/1:102:41,61:41:1468:61:2196:-167.199,0,-101.711	0/0:91:91,0:91:3256:0:0:0,-27.3937,-293.261	0/1:93:36,56:36:1288:56:2016:-153.658,0,-88.1691	0/1:109:54,55:54:1944:55:1972:-144.943,0,-142.424	0/1:63:22,41:22:788:41:1476:-114.171,0,-52.2799	0/0:91:91,0:91:3264:0:0:0,-27.3937,-293.98	0/0:129:129,0:129:4631:0:0:0,-38.8329,-416.951
chr02	24468990	.	TAAAATG	TAAAAATG	165576	PASS	AB=0.486667;ABP=13.8966;AC=135;AF=0.718085;AN=188;AO=8333;CIGAR=1M1I6M;DP=12001;DPB=13195.6;DPRA=0;EPP=18054.5;EPPR=7763.94;GTI=0;LEN=1;MEANALT=1.62766;MQM=59.9928;MQMR=59.9127;NS=94;NUMALT=1;ODDS=1.00923;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=291867;QR=126801;RO=3598;RPL=8328;RPP=18054.5;RPPR=7763.94;RPR=5;RUN=1;SAF=8333;SAP=18097.9;SAR=0;SRF=3598;SRP=7815.97;SRR=0;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	1/1:45:0,45:0:0:45:1576:-142.13,-13.5464,0	1/1:226:3,220:3:104:220:7667:-680.38,-57.7801,0	0/1:154:91,62:91:3164:62:2160:-148.247,0,-238.547	1/1:194:1,192:1:36:192:6715:-600.846,-54.8603,0	0/1:83:44,39:44:1554:39:1380:-99.5133,0,-115.168	0/1:94:57,37:57:2013:37:1296:-88.6443,0,-153.147	0/1:195:98,96:98:3452:96:3337:-241.795,0,-252.139	0/1:229:124,105:124:4370:105:3646:-259.413,0,-324.543	0/1:127:60,67:60:2122:67:2352:-173.707,0,-153.02	0/1:170:106,63:106:3738:63:2224:-149.192,0,-285.301	1/1:71:1,70:1:36:70:2504:-222.014,-17.7749,0	0/1:93:57,36:57:2027:36:1264:-86.0668,0,-154.707	1/1:82:0,81:0:0:81:2887:-259.707,-24.3834,0	0/1:197:89,106:89:3121:106:3755:-279.132,0,-221.969	0/1:70:35,35:35:1246:35:1234:-90.2906,0,-91.373	0/1:75:32,42:32:1124:42:1479:-110.768,0,-78.8323	1/1:126:0,126:0:0:126:4478:-403.192,-37.9298,0	1/1:97:0,97:0:0:97:3434:-309.275,-29.1999,0	1/1:58:0,58:0:0:58:2064:-186.031,-17.4597,0	0/1:181:87,94:87:3066:94:3285:-241.389,0,-221.685	1/1:171:0,170:0:0:170:5930:-533.458,-51.1751,0	1/1:150:0,149:0:0:149:5244:-471.881,-44.8535,0	0/1:70:26,44:26:903:44:1542:-117.996,0,-60.5117	1/1:153:0,150:0:0:150:5229:-470.509,-45.1545,0	1/1:105:0,101:0:0:101:3474:-312.517,-30.404,0	1/1:345:3,341:3:108:341:11955:-1065.77,-93.8165,0	1/1:243:0,241:0:0:241:8327:-748.996,-72.5482,0	1/1:45:0,45:0:0:45:1588:-143.21,-13.5464,0	0/1:246:112,134:112:3955:134:4613:-341.292,0,-282.084	0/1:256:127,129:127:4486:129:4512:-329.194,0,-326.839	0/1:192:105,86:105:3704:86:3052:-217.164,0,-275.818	0/1:16:9,7:9:313:7:240:-17.1182,0,-23.6896	1/1:50:0,50:0:0:50:1737:-156.612,-15.0515,0	1/1:5:0,5:0:0:5:172:-15.818,-1.50515,0	1/1:10:0,10:0:0:10:352:-32.0182,-3.0103,0	0/1:14:4,10:4:144:10:356:-28.1668,0,-9.0992	0/1:232:117,112:117:4156:112:3959:-287.22,0,-304.942	0/1:322:148,173:148:5225:173:6027:-445.56,0,-373.407	0/1:86:45,40:45:1580:40:1436:-103.59,0,-116.542	0/1:4:3,1:3:107:1:36:-2.39415,0,-8.77805	1/1:163:1,162:1:35:162:5657:-505.72,-45.5693,0	1/1:47:0,47:0:0:47:1671:-150.677,-14.1484,0	0/1:177:83,92:83:2933:92:3232:-238.138,0,-211.242	0/1:71:33,38:33:1177:38:1344:-99.887,0,-84.8651	0/1:82:33,49:33:1159:49:1724:-130.758,0,-79.9106	1/1:88:0,85:0:0:85:2961:-266.416,-25.5876,0	0/1:188:96,91:96:3375:91:3232:-234.452,0,-247.313	0/1:215:108,106:108:3807:106:3687:-267.26,0,-277.963	0/1:136:63,73:63:2202:73:2549:-188.722,0,-157.506	1/1:210:0,208:0:0:208:7315:-658.133,-62.6142,0	0/1:147:80,67:80:2824:67:2336:-166.251,0,-210.148	0/1:13:10,3:10:355:3:108:-6.16178,0,-28.3772	1/1:207:0,205:0:0:205:7155:-643.742,-61.7112,0	1/1:62:0,62:0:0:62:2184:-196.827,-18.6639,0	0/1:30:15,14:15:519:14:488:-35.1615,0,-37.9482	0/1:149:71,78:71:2502:78:2728:-200.911,0,-180.582	1/1:31:0,31:0:0:31:1062:-95.8867,-9.33193,0	0/1:7:2,5:2:64:5:172:-13.7108,0,-3.97116	0/1:46:22,24:22:789:24:833:-61.4375,0,-57.4879	0/1:138:74,64:74:2587:64:2241:-160.411,0,-191.537	1/1:186:2,181:2:72:181:6420:-571.078,-48.5969,0	1/1:11:0,11:0:0:11:380:-34.532,-3.31133,0	1/1:158:0,158:0:0:158:5524:-497.297,-47.5627,0	0/1:295:128,166:128:4502:166:5807:-433.898,0,-316.467	0/1:143:77,66:77:2738:66:2311:-165.205,0,-203.617	1/1:88:0,87:0:0:87:3052:-274.555,-26.1896,0	0/1:122:69,53:69:2426:53:1859:-130.863,0,-181.872	0/1:163:108,55:108:3798:55:1936:-125.449,0,-292.953	0/1:48:25,22:25:883:22:772:-55.4367,0,-65.4247	0/1:124:65,57:65:2291:57:1976:-141.047,0,-169.385	0/1:156:69,86:69:2439:86:3047:-227.59,0,-172.895	1/1:36:0,36:0:0:36:1226:-110.637,-10.8371,0	1/1:152:0,150:0:0:150:5163:-464.486,-45.1545,0	0/1:105:58,47:58:2031:47:1657:-117.807,0,-151.44	1/1:381:0,379:0:0:379:13242:-1191.31,-114.09,0	1/1:151:1,150:1:24:150:5253:-470.518,-43.0556,0	0/1:198:119,77:119:4170:77:2728:-186.403,0,-316.116	0/1:211:98,113:98:3446:113:3929:-290.295,0,-246.839	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	1/1:131:0,130:0:0:130:4537:-408.149,-39.1339,0	0/1:196:92,102:92:3238:102:3565:-262.356,0,-232.941	0/1:214:104,107:104:3647:107:3696:-269.025,0,-264.613	1/1:123:0,123:0:0:123:4337:-390.508,-37.0267,0	1/1:97:0,97:0:0:97:3426:-308.556,-29.1999,0	1/1:131:0,130:0:0:130:4582:-412.19,-39.1339,0	0/1:173:74,97:74:2632:97:3408:-255.155,0,-185.346	0/1:31:18,13:18:633:13:456:-32.0413,0,-47.9651	0/1:103:61,41:61:2157:41:1451:-99.8204,0,-163.333	1/1:86:0,86:0:0:86:3033:-273.202,-25.8886,0	0/1:92:57,34:57:2026:34:1163:-77.2168,0,-154.859	0/1:108:57,51:57:2010:51:1820:-131.57,0,-148.661	0/1:63:41,22:41:1456:22:780:-51.5581,0,-112.372	1/1:88:0,87:0:0:87:3000:-270.021,-26.1896,0	1/1:126:0,124:0:0:124:4350:-391.363,-37.3277,0
chr02	24637033	.	G	A	84022.8	PASS	AB=0.541385;ABP=44.8885;AC=134;AF=0.712766;AN=188;AO=4032;CIGAR=1X;DP=5327;DPB=5327;DPRA=0;EPP=8732.35;EPPR=2784.73;GTI=5;LEN=1;MEANALT=1.02128;MQM=59.5866;MQMR=59.9737;NS=94;NUMALT=1;ODDS=1.45213;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=143696;QR=45792;RO=1293;RPL=4032;RPP=8758.39;RPPR=2810.72;RPR=0;RUN=1;SAF=4029;SAP=8732.35;SAR=3;SRF=1290;SRP=2784.73;SRR=3;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:13:0,13:0:0:13:462:-41.9141,-3.91339,0	1/1:22:0,22:0:0:22:784:-70.8675,-6.62266,0	0/1:49:23,26:23:820:26:932:-69.4475,0,-59.372	1/1:58:0,58:0:0:58:2080:-187.47,-17.4597,0	0/1:12:5,7:5:180:7:237:-18.0467,0,-12.9397	0/1:21:7,14:7:252:14:495:-38.5467,0,-16.7073	0/1:18:7,11:7:248:11:381:-29.1997,0,-17.2457	0/1:38:16,22:16:572:22:784:-59.4362,0,-40.3661	0/1:15:10,5:10:352:5:180:-12.0366,0,-27.5027	0/1:38:15,23:15:532:23:820:-62.6787,0,-36.7739	1/1:60:0,59:0:0:59:2101:-188.981,-17.7608,0	0/1:38:23,15:23:800:15:540:-37.4974,0,-60.8766	1/1:23:0,23:0:0:23:821:-74.2107,-6.92369,0	0/1:16:7,9:7:240:9:324:-24.6894,0,-17.1182	0/1:26:15,11:15:513:11:396:-28.156,0,-38.6661	0/1:23:9,14:9:315:14:496:-38.0409,0,-21.7635	0/1:8:1,7:1:32:7:252:-20.6207,0,-0.791073	1/1:9:0,9:0:0:9:316:-28.7789,-2.70927,0	1/1:24:0,24:0:0:24:851:-76.8999,-7.22472,0	0/1:53:22,31:22:779:31:1093:-82.7231,0,-54.4775	1/1:57:0,57:0:0:57:2033:-183.24,-17.1587,0	1/1:34:0,34:0:0:34:1220:-110.106,-10.235,0	0/1:41:19,22:19:667:22:788:-58.9026,0,-48.0118	1/1:23:0,23:0:0:23:820:-74.1146,-6.92369,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:103:0,103:0:0:103:3700:-333.129,-31.0061,0	1/1:60:0,60:0:0:60:2131:-191.919,-18.0618,0	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:92:47,45:47:1671:45:1603:-116.86,0,-122.982	0/1:44:13,31:13:468:31:1107:-86.6902,0,-29.2143	0/1:24:11,13:11:392:13:464:-34.8728,0,-28.3953	0/1:112:57,55:57:2012:55:1964:-143.285,0,-147.631	1/1:252:0,252:0:0:252:9014:-811.186,-75.8596,0	1/1:332:1,331:1:36:331:11800:-1057.78,-96.3437,0	1/1:459:0,459:0:0:459:16291:-1465.64,-138.173,0	0/1:324:155,168:155:5491:168:5985:-441.11,0,-396.726	0/1:62:33,29:33:1167:29:1026:-73.9875,0,-86.6725	0/1:44:17,27:17:612:27:949:-72.4758,0,-42.1681	0/1:61:34,27:34:1208:27:957:-68.0244,0,-90.6633	0/1:107:51,56:51:1824:56:1999:-147.961,0,-132.231	1/1:44:0,44:0:0:44:1568:-141.393,-13.2453,0	1/1:38:0,38:0:0:38:1364:-123.039,-11.4391,0	0/1:44:13,31:13:464:31:1100:-86.0641,0,-28.8522	0/1:11:7,4:7:235:4:144:-10.0023,0,-18.1666	0/1:17:10,7:10:360:7:252:-17.9114,0,-27.6268	1/1:23:1,22:1:36:22:772:-66.2026,-3.32542,0	0/1:24:9,15:9:311:15:540:-41.7118,0,-21.099	0/1:46:21,25:21:748:25:892:-66.729,0,-53.7979	0/1:29:10,19:10:360:19:684:-52.5308,0,-24.0144	1/1:50:0,50:0:0:50:1762:-158.86,-15.0515,0	0/1:38:18,20:18:644:20:720:-53.6864,0,-46.8515	0/1:71:32,39:32:1129:39:1385:-103.569,0,-80.5432	1/1:33:0,33:0:0:33:1180:-106.506,-9.93399,0	1/1:15:0,15:0:0:15:540:-48.9356,-4.51545,0	0/1:100:48,52:48:1707:52:1860:-137.418,0,-123.812	0/1:59:27,32:27:960:32:1139:-85.0502,0,-68.9555	1/1:29:0,29:0:0:29:1040:-93.9079,-8.72987,0	0/1:110:46,64:46:1611:64:2291:-172.799,0,-112.16	0/1:69:26,43:26:928:43:1540:-118.098,0,-63.0672	0/1:14:3,11:3:93:11:396:-31.7683,0,-4.46231	1/1:36:0,36:0:0:36:1273:-114.866,-10.8371,0	1/1:109:0,109:0:0:109:3904:-351.507,-32.8123,0	1/1:51:0,51:0:0:51:1816:-163.72,-15.3525,0	0/1:58:27,31:27:964:31:1116:-83.292,0,-69.6171	0/1:16:5,11:5:176:11:396:-31.1616,0,-11.3685	1/1:20:0,20:0:0:20:716:-64.5901,-6.0206,0	0/1:52:18,34:18:644:34:1220:-94.4532,0,-42.637	0/1:54:29,25:29:1032:25:900:-65.0654,0,-76.9379	0/1:72:36,36:36:1275:36:1292:-94.8913,0,-93.3781	0/1:8:1,7:1:36:7:242:-19.6987,0,-1.19003	0/1:9:1,8:1:36:8:284:-23.1937,0,-0.889005	1/1:144:0,144:0:0:144:5124:-461.284,-43.3483,0	1/1:58:0,58:0:0:58:2072:-186.734,-17.4597,0	0/1:31:15,16:15:532:16:547:-40.1945,0,-38.8812	1/1:31:0,31:0:0:31:1108:-100.031,-9.33193,0	1/1:63:0,63:0:0:63:2247:-202.483,-18.9649,0	0/1:11:3,8:3:104:8:284:-22.5911,0,-6.39148	0/1:46:18,28:18:644:28:1004:-76.8285,0,-44.4432	0/1:253:132,121:132:4712:121:4325:-313.04,0,-348.078	1/1:48:0,48:0:0:48:1724:-155.432,-14.4494,0	1/1:42:0,42:0:0:42:1474:-132.928,-12.6433,0	0/1:61:22,39:22:760:39:1391:-107.121,0,-50.353	1/1:24:0,24:0:0:24:852:-76.9958,-7.22472,0	1/1:26:0,26:0:0:26:923:-83.3583,-7.82678,0	1/1:6:0,6:0:0:6:212:-19.42,-1.80618,0	0/1:25:16,9:16:559:9:320:-21.6166,0,-43.1119	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/1:23:15,8:15:523:8:288:-19.3437,0,-40.4748	1/1:9:0,9:0:0:9:312:-28.4135,-2.70927,0	0/1:69:31,38:31:1088:38:1359:-101.774,0,-77.4582	0/1:112:45,67:45:1582:67:2338:-176.923,0,-108.949	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	1/1:35:0,35:0:0:35:1256:-113.342,-10.5361,0	1/1:19:1,18:1:32:18:648:-55.4502,-2.52026,0
chr02	24638620	.	T	C	379342	PASS	AB=0.503586;ABP=4.27166;AC=135;AF=0.718085;AN=188;AO=14525;CIGAR=1X;DP=20147;DPB=20147;DPRA=0;EPP=31535;EPPR=12191.5;GTI=0;LEN=1;MEANALT=1.05319;MQM=59.8547;MQMR=59.9578;NS=94;NUMALT=1;ODDS=5.83453;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=511555;QR=200126;RO=5617;RPL=5905;RPP=1105;RPPR=581.243;RPR=8620;RUN=1;SAF=5904;SAP=1106.62;SAR=8621;SRF=2196;SRP=583.136;SRR=3421;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:113:0,113:0:0:113:3964:-356.945,-34.0164,0	1/1:407:0,407:0:0:407:14352:-1291.36,-122.519,0	0/1:272:138,134:138:4942:134:4683:-339.53,0,-363.048	1/1:508:3,504:3:108:504:17820:-1593.35,-142.877,0	0/1:273:149,124:149:5332:124:4410:-314.876,0,-397.815	0/1:174:82,92:82:2931:92:3279:-242.943,0,-211.004	0/1:305:145,160:145:5172:160:5641:-415.997,0,-373.805	0/1:414:194,220:194:6910:220:7766:-574.268,0,-497.333	0/1:277:154,123:154:5498:123:4322:-305.74,0,-411.532	0/1:337:160,177:160:5724:177:6278:-463.654,0,-413.829	1/1:67:0,67:0:0:67:2363:-212.926,-20.169,0	0/1:102:49,53:49:1747:53:1843:-135.428,0,-126.808	1/1:96:0,96:0:0:96:3378:-304.221,-28.8989,0	0/1:84:37,47:37:1328:47:1639:-122.374,0,-94.5357	0/1:138:51,87:51:1815:87:3037:-232.02,0,-122.089	0/1:91:33,58:33:1172:58:2048:-157.196,0,-78.3938	1/1:104:0,104:0:0:104:3620:-325.985,-31.3071,0	1/1:75:0,75:0:0:75:2617:-235.765,-22.5773,0	1/1:74:0,74:0:0:74:2583:-232.7,-22.2762,0	0/1:587:282,305:282:10046:305:10779:-793.313,0,-727.373	1/1:373:0,373:0:0:373:12993:-1168.98,-112.284,0	1/1:223:2,221:2:72:221:7786:-693.869,-60.293,0	0/1:212:102,110:102:3664:110:3890:-286.463,0,-266.144	1/1:176:0,176:0:0:176:6260:-563.46,-52.9813,0	1/1:196:0,196:0:0:196:6927:-623.465,-59.0019,0	1/1:839:2,837:2:72:837:29632:-2659.06,-245.727,0	1/1:506:1,505:1:36:505:17778:-1596.01,-148.723,0	1/1:49:0,49:0:0:49:1730:-155.983,-14.7505,0	0/1:661:342,318:342:12226:318:11221:-810.833,0,-901.249	0/1:184:85,99:85:3047:99:3480:-258.008,0,-217.88	0/1:283:129,154:129:4628:154:5427:-403.351,0,-331.491	0/1:6:2,4:2:68:4:129:-10.1215,0,-4.65153	1/1:13:0,13:0:0:13:464:-42.0929,-3.91339,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:14:0,14:0:0:14:482:-43.7061,-4.21442,0	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/1:261:138,123:138:4926:123:4276:-306.454,0,-364.922	0/1:370:179,191:179:6365:191:6743:-495.513,0,-461.373	0/1:90:37,52:37:1311:52:1806:-135.757,0,-91.227	0/1:7:5,2:5:171:2:72:-4.72951,0,-13.6182	1/1:303:0,303:0:0:303:10669:-960.066,-91.2121,0	1/1:40:0,40:0:0:40:1407:-126.917,-12.0412,0	0/1:366:204,162:204:7260:162:5718:-404.477,0,-543.192	0/1:160:74,86:74:2598:86:3008:-222.786,0,-185.902	0/1:101:46,55:46:1639:55:1912:-141.949,0,-117.394	1/1:306:0,306:0:0:306:10789:-970.919,-92.1152,0	0/1:305:131,174:131:4668:174:6115:-458.642,0,-328.47	0/1:416:205,211:205:7289:211:7474:-547.386,0,-530.836	0/1:290:141,149:141:5021:149:5259:-386.134,0,-364.739	1/1:266:2,264:2:72:264:9272:-827.606,-73.2373,0	0/1:272:132,140:132:4713:140:4978:-366.2,0,-342.449	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:348:0,348:0:0:348:12246:-1101.96,-104.758,0	1/1:105:0,105:0:0:105:3687:-332.024,-31.6082,0	0/1:8:2,6:2:72:6:212:-17.0166,0,-4.42848	0/1:369:194,175:194:6909:175:6161:-443.453,0,-510.778	1/1:98:0,98:0:0:98:3455:-311.161,-29.5009,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:29:18,11:18:648:11:392:-26.8893,0,-49.922	0/1:144:81,63:81:2895:63:2234:-157.97,0,-217.437	1/1:154:0,153:0:0:153:5309:-477.63,-46.0576,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:533:1,532:1:36:532:18821:-1689.86,-156.851,0	0/1:405:209,196:209:7431:196:6949:-503.374,0,-546.922	0/1:152:73,79:73:2606:79:2798:-206.281,0,-189.031	1/1:205:0,205:0:0:205:7222:-650.025,-61.7112,0	0/1:585:293,292:293:10398:292:10334:-753.772,0,-759.642	0/1:269:174,95:174:6185:95:3347:-220.462,0,-475.774	0/1:24:13,11:13:468:11:374:-26.7617,0,-35.2349	0/1:170:73,97:73:2585:97:3393:-254.41,0,-181.723	0/1:131:71,60:71:2532:60:2118:-151.452,0,-188.697	1/1:19:0,19:0:0:19:657:-59.4498,-5.71957,0	1/1:235:0,235:0:0:235:8184:-736.546,-70.7421,0	0/1:210:108,102:108:3880:102:3580:-259.189,0,-286.174	1/1:381:0,381:0:0:381:13440:-1208.58,-114.692,0	1/1:379:0,379:0:0:379:13493:-1214.09,-114.09,0	0/1:279:137,142:137:4899:142:5028:-368.678,0,-357.074	0/1:239:131,108:131:4677:108:3821:-272.135,0,-349.075	0/1:10:7,3:7:239:3:108:-7.06487,0,-18.8324	1/1:279:1,278:1:36:278:9812:-879.37,-80.3891,0	1/1:320:0,320:0:0:320:11237:-1010.95,-96.3296,0	0/1:594:263,331:263:9336:331:11725:-876.184,0,-661.4	1/1:158:0,158:0:0:158:5514:-496.302,-47.5627,0	1/1:81:0,81:0:0:81:2838:-255.656,-24.3834,0	1/1:151:0,151:0:0:151:5189:-467.14,-45.4555,0	0/1:207:98,109:98:3437:109:3777:-277.817,0,-247.231	0/1:73:36,37:36:1279:37:1323:-97.388,0,-93.4373	0/1:97:49,47:49:1752:47:1591:-114.214,0,-128.697	1/1:121:0,121:0:0:121:4248:-382.489,-36.4246,0	0/1:41:22,19:22:780:19:636:-45.2113,0,-58.1808	0/1:90:43,47:43:1500:47:1615:-118.527,0,-108.198	0/1:111:67,44:67:2363:44:1561:-107.279,0,-179.512	1/1:364:0,364:0:0:364:12859:-1157.14,-109.575,0	1/1:159:1,158:1:36:158:5500:-491.499,-44.2655,0
chr02	24684889	.	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chr02	24773135	.	T	G	48423.6	PASS	AB=0.477335;ABP=30.4725;AC=53;AF=0.281915;AN=188;AO=2944;CIGAR=1X;DP=11404;DPB=11404;DPRA=1.11172;EPP=6395.83;EPPR=18352;GTI=1;LEN=1;MEANALT=1.14035;MQM=59.5187;MQMR=59.9683;NS=94;NUMALT=1;ODDS=4.5798;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104885;QR=302693;RO=8450;RPL=2944;RPP=6395.83;RPPR=18343.3;RPR=0;RUN=1;SAF=2944;SAP=6395.83;SAR=0;SRF=8449;SRP=18343.3;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:72:72,0:72:2588:0:0:0,-21.6742,-232.979	0/0:171:171,0:171:6117:0:0:0,-51.4761,-550.624	0/1:126:86,40:86:3083:40:1431:-91.0855,0,-239.767	0/0:331:331,0:331:11855:0:0:0,-99.6409,-1066.6	0/1:80:45,35:45:1604:35:1235:-87.3262,0,-120.568	0/1:80:52,28:52:1863:28:1008:-66.954,0,-143.862	0/1:200:115,85:115:4132:85:3039:-213.499,0,-311.851	0/1:127:47,80:47:1669:80:2868:-220.09,0,-112.265	0/1:152:58,94:58:2059:94:3335:-254.436,0,-139.824	0/1:104:55,49:55:1972:49:1733:-124.932,0,-146.448	0/0:49:49,0:49:1736:0:0:0,-14.7505,-156.522	0/1:61:27,34:27:945:34:1220:-91.7082,0,-66.9994	0/0:73:73,0:73:2628:0:0:0,-21.9752,-236.766	0/1:59:26,33:26:920:33:1178:-88.5424,0,-65.3563	0/1:77:34,42:34:1220:42:1504:-112.403,0,-86.8687	0/1:48:22,26:22:788:26:920:-68.6452,0,-56.7954	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.114	0/0:65:65,0:65:2323:0:0:0,-19.5669,-209.33	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/1:373:189,183:189:6780:183:6520:-474.286,0,-497.701	0/0:205:202,3:202:7243:3:108:0,-51.636,-641.844	0/0:216:216,0:216:7748:0:0:0,-65.0225,-697.35	0/1:134:52,82:52:1848:82:2927:-223.256,0,-126.262	0/0:149:149,0:149:5326:0:0:0,-44.8535,-479.473	0/0:129:129,0:129:4623:0:0:0,-38.8329,-416.21	0/0:509:505,1:505:18074:1:36:0,-149.079,-1622.67	0/0:262:261,0:261:9354:0:0:0,-78.5688,-841.439	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/1:368:211,157:211:7562:157:5603:-393.576,0,-569.838	0/1:226:116,110:116:4139:110:3905:-283.587,0,-304.659	0/1:180:79,101:79:2832:101:3601:-270.069,0,-200.933	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/1:195:97,97:97:3488:97:3437:-250.76,0,-255.37	0/1:233:125,108:125:4477:108:3844:-275.893,0,-332.957	0/1:30:17,13:17:608:13:464:-33.0666,0,-46.0211	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/0:217:217,0:217:7780:0:0:0,-65.3235,-700.181	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/1:160:107,53:107:3835:53:1900:-123.091,0,-297.181	0/1:80:48,32:48:1728:32:1135:-78.3556,0,-131.723	0/1:50:22,28:22:788:28:1008:-75.9711,0,-56.1933	0/0:174:173,1:173:6192:1:36:0,-48.7809,-553.777	0/1:162:84,78:84:3012:78:2774:-200.581,0,-222.544	0/1:165:96,69:96:3456:69:2468:-172.676,0,-261.581	0/1:185:113,72:113:4042:72:2555:-174.477,0,-308.276	0/0:135:135,0:135:4830:0:0:0,-40.639,-434.854	0/1:182:91,91:91:3272:91:3247:-237.626,0,-239.912	0/1:17:7,10:7:252:10:360:-27.6268,0,-17.9114	0/0:153:153,0:153:5500:0:0:0,-46.0576,-495.124	0/0:71:71,0:71:2544:0:0:0,-21.3731,-229.211	0/1:18:9,9:9:320:9:324:-24.0512,0,-23.7238	0/1:188:101,87:101:3591:87:3097:-222.363,0,-266.802	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/1:6:3,3:3:108:3:104:-7.89663,0,-8.26899	0/1:20:17,3:17:612:3:104:-3.68221,0,-49.3928	0/1:76:35,40:35:1252:40:1419:-104.98,0,-90.0481	0/0:112:112,0:112:4024:0:0:0,-33.7154,-362.347	0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7255	0/0:307:307,0:307:10985:0:0:0,-92.4162,-988.544	0/1:234:141,92:141:5072:92:3255:-222.391,0,-386.122	0/1:61:36,25:36:1292:25:896:-62.5705,0,-98.2209	0/0:142:142,0:142:5093:0:0:0,-42.7463,-458.51	0/1:252:136,116:136:4888:116:4147:-297.507,0,-364.21	0/1:178:67,110:67:2383:110:3929:-300.071,0,-161.072	0/1:20:13,7:13:464:7:252:-17.0084,0,-36.0769	0/1:73:33,40:33:1175:40:1410:-105.141,0,-84.0818	0/1:84:49,35:49:1760:35:1252:-87.1913,0,-133.397	0/0:26:26,0:26:927:0:0:0,-7.82678,-83.7474	0/0:103:103,0:103:3682:0:0:0,-31.0061,-331.582	0/1:60:36,24:36:1296:24:860:-59.66,0,-98.8821	0/0:233:233,0:233:8314:0:0:0,-70.14,-748.268	0/0:222:222,0:222:7980:0:0:0,-66.8287,-718.217	0/1:90:35,55:35:1256:55:1937:-147.463,0,-86.251	0/1:99:47,52:47:1692:52:1856:-137.48,0,-122.765	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	0/0:163:163,0:163:5836:0:0:0,-49.0679,-525.35	0/0:153:153,0:153:5496:0:0:0,-46.0576,-494.76	0/1:339:207,132:207:7431:132:4720:-322.428,0,-566.78	0/0:97:97,0:97:3488:0:0:0,-29.1999,-314.13	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/0:85:85,0:85:3042:0:0:0,-25.5875,-274.008	0/1:137:60,77:60:2148:77:2733:-204.93,0,-152.346	0/1:62:32,30:32:1152:30:1068:-77.7242,0,-85.3263	0/1:80:38,42:38:1364:42:1500:-110.895,0,-98.9783	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.853	0/1:27:14,13:14:504:13:468:-34.3318,0,-37.5703	0/1:81:40,41:40:1403:41:1440:-105.51,0,-102.18	0/1:69:17,52:17:612:52:1851:-146.071,0,-34.6424	0/0:157:156,1:156:5580:1:36:0,-43.6634,-497.668	0/0:92:92,0:92:3285:0:0:0,-27.6948,-295.868
chr02	24773233	.	C	T	199636	PASS	AB=0.516861;ABP=21.3906;AC=135;AF=0.718085;AN=188;AO=9650;CIGAR=1X;DP=13252;DPB=13252;DPRA=0;EPP=20957.7;EPPR=7811.63;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.4336;MQMR=59.639;NS=94;NUMALT=1;ODDS=12.1573;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=344629;QR=128282;RO=3596;RPL=9650;RPP=20957.7;RPPR=7811.63;RPR=0;RUN=1;SAF=0;SAP=20957.7;SAR=9650;SRF=0;SRP=7811.63;SRR=3596;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:162:1,161:1:36:161:5711:-509.87,-45.2,0	0/1:163:94,69:94:3376:69:2472:-173.525,0,-254.968	1/1:363:0,363:0:0:363:12923:-1162.47,-109.274,0	0/1:69:38,31:38:1337:31:1108:-79.2315,0,-99.7998	0/1:81:30,51:30:1080:51:1820:-139.669,0,-73.0435	0/1:272:121,150:121:4279:150:5312:-396.066,0,-302.654	0/1:238:138,100:138:4933:100:3557:-247.61,0,-372.364	0/1:118:54,63:54:1940:63:2264:-168.414,0,-139.243	0/1:55:21,34:21:752:34:1216:-93.1615,0,-51.3945	1/1:64:0,64:0:0:64:2304:-207.62,-19.2659,0	0/1:101:51,50:51:1813:50:1784:-130.382,0,-132.887	1/1:89:0,89:0:0:89:3192:-287.486,-26.7917,0	0/1:96:42,54:42:1493:54:1940:-145.964,0,-105.655	0/1:68:31,37:31:1104:37:1313:-98.0005,0,-79.1983	0/1:71:35,36:35:1211:36:1292:-95.1822,0,-87.9129	1/1:76:0,76:0:0:76:2720:-244.963,-22.8783,0	1/1:83:0,83:0:0:83:2984:-268.791,-24.9855,0	1/1:39:0,39:0:0:39:1385:-124.93,-11.7402,0	0/1:389:179,209:179:6386:209:7433:-550.51,0,-457.495	1/1:213:0,213:0:0:213:7583:-681.656,-64.1194,0	1/1:217:0,217:0:0:217:7777:-699.755,-65.3235,0	0/1:100:61,39:61:2177:39:1389:-95.2039,0,-166.08	1/1:91:0,91:0:0:91:3234:-291.226,-27.3937,0	1/1:99:0,99:0:0:99:3537:-318.407,-29.802,0	1/1:464:0,464:0:0:464:16613:-1494.4,-139.678,0	1/1:299:1,298:1:36:298:10661:-955.534,-86.4097,0	1/1:30:1,29:1:36:29:1040:-90.2927,-5.43263,0	0/1:566:257,309:257:9197:309:11025:-821.205,0,-657.293	0/1:167:78,89:78:2800:89:3181:-236.156,0,-201.962	0/1:143:76,67:76:2728:67:2404:-173.287,0,-202.712	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9895	1/1:63:0,63:0:0:63:2264:-203.937,-18.9649,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:37:0,37:0:0:37:1313:-118.356,-11.1381,0	0/1:15:8,7:8:288:7:252:-18.5135,0,-21.752	0/1:252:122,130:122:4337:130:4664:-344.004,0,-314.619	0/1:302:156,146:156:5574:146:5213:-377.789,0,-410.861	0/1:83:47,36:47:1684:36:1291:-91.5067,0,-126.544	0/1:7:4,3:4:144:3:108:-7.93859,0,-11.2064	1/1:213:0,213:0:0:213:7628:-685.455,-64.1194,0	1/1:34:0,34:0:0:34:1205:-108.696,-10.235,0	0/1:161:78,83:78:2778:83:2968:-218.83,0,-201.468	0/1:92:56,36:56:2000:36:1284:-88.1653,0,-152.576	0/1:53:28,25:28:996:25:890:-64.1645,0,-73.9956	1/1:167:0,167:0:0:167:5926:-533.428,-50.272,0	0/1:230:101,129:101:3609:129:4628:-346.514,0,-255.029	0/1:274:119,155:119:4234:155:5556:-416.987,0,-298.316	0/1:191:93,98:93:3321:98:3520:-259.371,0,-241.604	1/1:188:0,188:0:0:188:6703:-602.92,-56.5936,0	0/1:177:90,87:90:3220:87:3093:-225.214,0,-236.736	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	1/1:178:1,177:1:36:177:6311:-564.359,-49.9851,0	1/1:76:0,76:0:0:76:2716:-244.655,-22.8783,0	0/1:47:21,26:21:756:26:932:-70.0505,0,-53.8998	0/1:279:127,151:127:4533:151:5362:-398.449,0,-324.088	1/1:41:0,41:0:0:41:1457:-131.34,-12.3422,0	0/1:7:4,3:4:144:3:104:-7.5956,0,-11.2064	0/1:27:8,19:8:284:19:680:-53.4014,0,-17.7755	0/1:86:53,33:53:1870:33:1176:-80.1624,0,-142.685	1/1:133:0,133:0:0:133:4751:-427.428,-40.037,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:322:0,322:0:0:322:11505:-1035,-96.9317,0	0/1:236:88,148:88:3137:148:5276:-403.601,0,-211.499	0/1:58:35,23:35:1240:23:817:-56.391,0,-94.3855	1/1:161:0,161:0:0:161:5721:-513.039,-48.4658,0	0/1:322:129,193:129:4605:193:6909:-524.175,0,-317.418	0/1:124:80,44:80:2868:44:1572:-104.348,0,-221.024	0/1:38:24,14:24:864:14:504:-34.259,0,-66.6434	0/1:133:48,85:48:1720:85:3003:-230.403,0,-115.045	0/1:113:49,64:49:1748:64:2284:-171.749,0,-123.575	1/1:39:0,39:0:0:39:1381:-124.26,-11.7402,0	1/1:243:0,242:0:0:242:8617:-773.095,-72.8493,0	0/1:97:48,49:48:1686:49:1764:-129.844,0,-122.805	1/1:248:0,248:0:0:248:8834:-792.774,-74.6554,0	1/1:239:0,239:0:0:239:8483:-762.23,-71.9462,0	0/1:182:75,107:75:2665:107:3821:-289.157,0,-185.216	0/1:122:70,52:70:2508:52:1864:-131.086,0,-189.155	0/1:15:6,9:6:216:9:324:-24.9904,0,-15.2387	1/1:161:0,161:0:0:161:5788:-519.975,-48.4658,0	1/1:222:0,222:0:0:222:7952:-715.365,-66.8287,0	0/1:450:222,228:222:7869:228:8125:-595.43,0,-572.61	1/1:116:0,116:0:0:116:4168:-375.132,-34.9195,0	1/1:74:0,74:0:0:74:2652:-238.813,-22.2762,0	1/1:99:0,99:0:0:99:3564:-320.84,-29.802,0	0/1:142:70,72:70:2512:72:2592:-190.614,0,-183.579	0/1:51:27,24:27:964:24:849:-61.3753,0,-71.7212	0/1:79:42,37:42:1504:37:1328:-95.9987,0,-111.817	1/1:87:0,87:0:0:87:3112:-280.242,-26.1896,0	0/1:72:30,42:30:1080:42:1496:-113.243,0,-75.8187	0/1:131:62,69:62:2202:69:2477:-183.567,0,-158.998	0/1:72:49,23:49:1760:23:820:-52.3922,0,-137.006	1/1:207:0,206:0:0:206:7384:-664.076,-62.0122,0	1/1:140:0,140:0:0:140:5002:-450.182,-42.1442,0
chr02	24847822	.	C	A	49849.2	PASS	AB=0.537157;ABP=65.9449;AC=56;AF=0.297872;AN=188;AO=2848;CIGAR=1X;DP=9372;DPB=9372;DPRA=0.993756;EPP=6118.07;EPPR=14011.6;GTI=0;LEN=1;MEANALT=1.07018;MQM=59.5207;MQMR=59.6564;NS=94;NUMALT=1;ODDS=0.601809;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102068;QR=233403;RO=6519;RPL=8;RPP=6118.07;RPPR=14011.6;RPR=2840;RUN=1;SAF=2848;SAP=6187.36;SAR=0;SRF=6519;SRP=14158.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5477	0/0:131:130,1:130:4624:1:36:0,-35.8367,-412.466	0/1:129:79,50:79:2828:50:1796:-122.853,0,-215.836	0/0:143:143,0:143:5115:0:0:0,-43.0473,-460.413	0/1:81:28,53:28:1004:53:1904:-147.125,0,-66.2761	0/1:29:9,20:9:324:20:712:-55.6768,0,-20.776	0/1:102:46,56:46:1652:56:2016:-150.993,0,-118.242	0/1:168:91,77:91:3238:77:2764:-198.402,0,-241.056	0/1:130:63,66:63:2255:66:2361:-173.524,0,-164.02	0/1:154:68,86:68:2426:86:3081:-231.12,0,-172.236	0/0:55:55,0:55:1980:0:0:0,-16.5566,-178.433	0/1:92:47,45:47:1680:45:1620:-118.342,0,-123.773	0/1:72:37,34:37:1324:34:1217:-88.0991,0,-97.7163	0/1:75:48,27:48:1724:27:972:-65.2125,0,-132.827	0/1:66:34,32:34:1216:32:1152:-84.1222,0,-89.8656	0/1:64:26,38:26:936:38:1368:-104.138,0,-65.2935	0/0:101:101,0:101:3632:0:0:0,-30.404,-327.057	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.181	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/1:211:111,100:111:3980:100:3588:-259.174,0,-294.779	0/0:118:118,0:118:4202:0:0:0,-35.5215,-378.357	0/0:113:113,0:113:4040:0:0:0,-34.0164,-363.777	0/1:71:41,30:41:1472:30:1080:-76.1355,0,-111.392	0/0:49:49,0:49:1744:0:0:0,-14.7505,-157.053	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.39	0/0:415:415,0:415:14852:0:0:0,-124.927,-1336.34	0/0:250:250,0:250:8933:0:0:0,-75.2575,-803.555	0/0:53:53,0:53:1896:0:0:0,-15.9546,-170.918	0/1:373:184,188:184:6603:188:6730:-493.422,0,-481.853	0/1:90:31,59:31:1104:59:2124:-164.141,0,-72.5694	0/1:113:61,52:61:2184:52:1860:-133.662,0,-162.797	1/1:4:0,4:0:0:4:144:-13.3052,-1.20412,0	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.0356	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:6:5,1:5:176:1:36:-1.79209,0,-14.3788	0/1:216:107,109:107:3825:109:3898:-285.8,0,-279.397	0/1:159:97,62:97:3458:62:2217:-151.896,0,-263.527	0/1:70:32,38:32:1148:38:1368:-102.285,0,-82.5392	0/1:4:3,1:3:104:1:36:-2.39415,0,-8.49024	0/0:95:95,0:95:3400:0:0:0,-28.5978,-306.212	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.17	0/1:116:42,74:42:1504:74:2649:-203.734,0,-100.735	0/1:89:35,54:35:1252:54:1917:-145.99,0,-86.1828	0/1:90:42,48:42:1512:48:1728:-128.624,0,-109.25	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.339	0/1:130:58,72:58:2079:72:2581:-193.311,0,-148.245	0/1:165:66,99:66:2368:99:3517:-266.727,0,-163.667	0/1:147:58,89:58:2075:89:3185:-242.577,0,-142.736	0/0:283:282,0:282:10086:0:0:0,-84.8905,-907.134	0/1:141:46,95:46:1656:95:3405:-264.215,0,-106.873	0/1:12:10,2:10:356:2:72:-3.22436,0,-28.7689	0/0:134:134,0:134:4788:0:0:0,-40.338,-431.062	0/0:34:34,0:34:1215:0:0:0,-10.235,-109.633	1/1:24:2,22:2:72:22:792:-64.7689,-0.387998,0	0/1:97:57,40:57:2036:40:1440:-100.693,0,-154.312	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7755	0/1:17:10,7:10:360:7:252:-17.9114,0,-27.6268	0/1:54:23,31:23:828:31:1116:-84.4833,0,-58.587	0/0:105:105,0:105:3763:0:0:0,-31.6081,-338.853	0/0:11:11,0:11:388:0:0:0,-3.31133,-35.2466	0/0:211:211,0:211:7572:0:0:0,-63.5173,-681.266	0/1:199:78,121:78:2800:121:4318:-328.832,0,-192.303	0/1:44:18,26:18:648:26:934:-71.1206,0,-45.4066	0/0:110:110,0:110:3930:0:0:0,-33.1133,-353.67	0/1:137:67,69:67:2408:69:2479:-182.081,0,-175.677	0/1:78:22,56:22:788:56:2006:-157.329,0,-47.7561	0/1:24:11,13:11:392:13:453:-33.8422,0,-28.3953	0/1:63:29,34:29:1040:34:1220:-90.5026,0,-74.9433	0/1:100:54,46:54:1931:46:1652:-118.865,0,-143.949	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:62:62,0:62:2223:0:0:0,-18.6639,-200.19	0/1:76:27,49:27:968:49:1721:-132.257,0,-64.5591	0/0:117:117,0:117:4181:0:0:0,-35.2205,-376.451	0/0:166:166,0:166:5948:0:0:0,-49.971,-535.386	0/1:102:45,57:45:1620:57:2044:-153.309,0,-115.35	0/1:113:52,61:52:1851:61:2192:-163.464,0,-132.851	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/0:133:133,0:133:4766:0:0:0,-40.037,-429.083	0/0:132:132,0:132:4698:0:0:0,-39.736,-422.895	0/1:220:56,164:56:1992:164:5890:-463.874,0,-113.304	0/0:123:123,0:123:4420:0:0:0,-37.0267,-397.871	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.469	0/0:147:147,0:147:5259:0:0:0,-44.2514,-473.174	0/1:178:81,97:81:2891:97:3484:-260.151,0,-206.831	0/1:50:31,19:31:1116:19:684:-46.7327,0,-85.694	0/1:104:51,53:51:1828:53:1908:-140.606,0,-133.478	0/0:120:119,1:119:4276:1:36:0,-32.5322,-380.379	0/1:36:23,13:23:828:13:468:-31.6226,0,-63.9907	0/1:61:37,24:37:1328:24:864:-59.6788,0,-101.441	0/1:115:38,77:38:1368:77:2765:-213.904,0,-88.7902	0/0:142:141,1:141:5064:1:36:0,-39.148,-452.257	0/0:129:129,0:129:4632:0:0:0,-38.8329,-417.037
chr02	24847861	.	C	G	130916	PASS	AB=0.460624;ABP=72.0978;AC=132;AF=0.702128;AN=188;AO=6346;CIGAR=1X;DP=9145;DPB=9145;DPRA=24.5726;EPP=13783.2;EPPR=6065.76;GTI=0;LEN=1;MEANALT=1.07527;MQM=59.6645;MQMR=59.6067;NS=94;NUMALT=1;ODDS=0.88864;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=226170;QR=98704;RO=2792;RPL=6329;RPP=13635.9;RPPR=6057.08;RPR=17;RUN=1;SAF=6329;SAP=13635.9;SAR=17;SRF=2791;SRP=6057.08;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:29:0,29:0:0:29:1027:-92.7397,-8.72987,0	1/1:128:1,127:1:36:127:4532:-404.105,-34.9336,0	0/1:130:52,78:52:1830:78:2796:-212.656,0,-125.609	1/1:140:0,140:0:0:140:4995:-449.659,-42.1442,0	0/1:80:53,27:53:1855:27:950:-61.7218,0,-143.014	0/1:29:20,9:20:699:9:324:-20.776,0,-54.5026	0/1:100:55,45:55:1971:45:1616:-115.598,0,-147.546	0/1:162:74,88:74:2586:88:3135:-233.597,0,-184.207	0/1:121:63,58:63:2221:58:2064:-149.6,0,-163.706	0/1:149:83,66:83:2920:66:2348:-166.726,0,-218.169	1/1:54:0,54:0:0:54:1908:-171.961,-16.2556,0	0/1:90:43,47:43:1511:47:1676:-124.015,0,-109.134	0/1:70:34,36:34:1180:36:1266:-93.1552,0,-85.4208	0/1:71:26,45:26:924:45:1600:-122.876,0,-62.0964	0/1:65:31,34:31:1116:34:1207:-89.3646,0,-81.1847	0/1:64:38,26:38:1343:26:923:-64.1208,0,-101.893	1/1:97:0,97:0:0:97:3476:-313.025,-29.1999,0	1/1:79:0,79:0:0:79:2822:-254.206,-23.7814,0	1/1:42:0,42:0:0:42:1500:-135.295,-12.6433,0	0/1:205:95,109:95:3392:109:3895:-288.886,0,-243.089	1/1:118:0,118:0:0:118:4220:-379.97,-35.5215,0	1/1:109:0,109:0:0:109:3878:-349.202,-32.8123,0	0/1:69:29,40:29:1007:40:1428:-108.036,0,-70.1656	1/1:44:0,44:0:0:44:1584:-142.661,-13.2453,0	1/1:52:1,51:1:36:51:1817:-160.201,-12.0553,0	1/1:403:0,402:0:0:402:14325:-1288.61,-121.014,0	1/1:241:0,241:0:0:241:8618:-775.325,-72.5482,0	1/1:54:0,54:0:0:54:1927:-173.706,-16.2556,0	0/1:366:183,183:183:6505:183:6522:-476.853,0,-475.354	0/1:89:57,31:57:2026:31:1108:-73.1728,0,-155.572	0/1:109:49,60:49:1748:60:2125:-158.687,0,-124.791	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9362	1/1:15:0,15:0:0:15:531:-48.1137,-4.51545,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:7:0,7:0:0:7:243:-22.2075,-2.10721,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:214:107,107:107:3798:107:3808:-278.479,0,-277.569	0/1:152:60,92:60:2098:92:3270:-248.739,0,-143.311	0/1:66:37,29:37:1309:29:1031:-73.2161,0,-98.1948	0/1:4:1,3:1:36:3:104:-8.49024,0,-2.39415	1/1:93:0,93:0:0:93:3308:-297.938,-27.9958,0	1/1:37:0,37:0:0:37:1332:-120.17,-11.1381,0	0/1:111:70,41:70:2492:41:1460:-98.2817,0,-191.119	0/1:86:54,32:54:1902:32:1152:-78.0909,0,-145.544	0/1:86:46,40:46:1611:40:1427:-102.806,0,-119.385	1/1:35:0,35:0:0:35:1229:-110.902,-10.5361,0	0/1:125:71,53:71:2498:53:1887:-132.421,0,-187.296	0/1:161:99,62:99:3504:62:2216:-151.215,0,-266.76	0/1:144:88,56:88:3060:56:2000:-136.893,0,-232.272	1/1:277:0,277:0:0:277:9849:-886.182,-83.3853,0	0/1:139:93,46:93:3307:46:1643:-106.306,0,-256.005	0/1:12:2,10:2:72:10:352:-28.4058,0,-3.22436	1/1:131:0,130:0:0:130:4643:-417.666,-39.1339,0	1/1:32:0,32:0:0:32:1144:-103.246,-9.63296,0	0/0:24:22,2:22:784:2:72:0,-0.387997,-64.0472	0/1:94:38,56:38:1331:56:2008:-152.697,0,-91.7922	1/1:14:0,14:0:0:14:495:-44.883,-4.21442,0	0/1:10:4,6:4:144:6:216:-16.7755,0,-10.3033	0/1:17:7,10:7:244:10:360:-27.6268,0,-17.1819	0/1:52:30,22:30:1044:22:784:-55.2288,0,-78.6034	1/1:101:0,101:0:0:101:3608:-324.912,-30.404,0	1/1:10:0,10:0:0:10:347:-31.5636,-3.0103,0	1/1:207:0,207:0:0:207:7388:-664.906,-62.3132,0	0/1:195:118,77:118:4187:77:2743:-188.38,0,-318.224	0/1:42:26,16:26:920:16:568:-38.8086,0,-70.4623	1/1:110:0,110:0:0:110:3893:-350.235,-33.1133,0	0/1:130:66,64:66:2328:64:2289:-167.087,0,-170.637	0/1:78:56,22:56:1967:22:761:-45.3133,0,-153.815	0/1:24:12,12:12:419:12:419:-30.818,0,-30.8075	0/1:63:35,28:35:1260:28:1000:-71.3443,0,-94.1014	0/1:100:49,51:49:1718:51:1832:-135.047,0,-124.799	1/1:23:0,23:0:0:23:820:-74.1216,-6.92369,0	1/1:58:0,58:0:0:58:2076:-186.781,-17.4597,0	0/1:74:45,29:45:1591:29:1029:-70.6362,0,-121.182	1/1:113:0,113:0:0:113:4017:-361.702,-34.0164,0	1/1:165:0,165:0:0:165:5896:-530.705,-49.67,0	0/1:99:55,44:55:1963:44:1576:-112.312,0,-147.117	0/1:114:63,51:63:2239:51:1807:-128.592,0,-167.391	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	1/1:131:0,131:0:0:131:4659:-419.462,-39.4349,0	1/1:130:0,130:0:0:130:4574:-411.81,-39.1339,0	0/1:218:161,57:161:5695:57:2032:-117.507,0,-447.029	1/1:122:0,122:0:0:122:4347:-391.305,-36.7257,0	1/1:65:0,65:0:0:65:2324:-209.273,-19.567,0	1/1:141:0,141:0:0:141:5034:-453.067,-42.4452,0	0/1:176:96,80:96:3398:80:2851:-203.73,0,-253.017	0/1:51:20,31:20:716:31:1103:-84.2265,0,-49.3009	0/1:102:53,49:53:1866:49:1755:-127.515,0,-137.469	1/1:114:0,113:0:0:113:4021:-361.665,-34.0164,0	0/1:37:14,23:14:496:23:824:-63.3288,0,-33.8362	0/1:59:23,36:23:828:36:1288:-98.4358,0,-57.0506	0/1:115:77,37:77:2725:37:1332:-85.4929,0,-209.702	1/1:134:1,133:1:36:133:4734:-422.585,-36.7397,0	1/1:123:0,123:0:0:123:4399:-396.079,-37.0267,0
chr02	25259700	.	T	C	69258.1	PASS	AB=0.411599;ABP=219.542;AC=133;AF=0.707447;AN=188;AO=3525;CIGAR=1X;DP=5420;DPB=5420;DPRA=9.7971;EPP=7657.45;EPPR=3688.62;GTI=2;LEN=1;MEANALT=1.03261;MQM=59.8948;MQMR=59.9873;NS=94;NUMALT=1;ODDS=0.0122765;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123974;QR=67428;RO=1892;RPL=0;RPP=7657.45;RPPR=3688.62;RPR=3525;RUN=1;SAF=0;SAP=7657.45;SAR=3525;SRF=0;SRP=4111.44;SRR=1892;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:63:0,63:0:0:63:2170:-195.561,-18.9649,0	1/1:34:0,34:0:0:34:1203:-108.575,-10.235,0	0/1:89:64,25:64:2279:25:875:-52.2745,0,-178.58	1/1:101:1,100:1:36:100:3527:-314.042,-26.8058,0	0/1:56:26,30:26:932:30:1063:-79.1208,0,-67.335	0/1:34:28,6:28:996:6:212:-9.18978,0,-79.65	0/1:76:51,25:51:1820:25:880:-56.6394,0,-141.203	0/1:84:53,31:53:1896:31:1085:-72.6687,0,-145.632	0/1:99:44,55:44:1580:55:1912:-142.551,0,-112.69	0/1:45:26,19:26:936:19:680:-47.9828,0,-71.0131	1/1:26:0,26:0:0:26:920:-83.1137,-7.82678,0	0/1:79:37,42:37:1315:42:1492:-110.792,0,-94.8697	0/1:57:22,35:22:788:35:1235:-94.2947,0,-54.0861	0/1:29:14,15:14:504:15:531:-39.392,0,-36.9682	0/1:63:28,35:28:1004:35:1244:-93.2942,0,-71.711	0/1:34:11,23:11:392:23:828:-64.6068,0,-25.385	1/1:18:0,18:0:0:18:636:-57.5665,-5.41854,0	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	1/1:13:0,13:0:0:13:460:-41.7338,-3.91339,0	0/1:86:55,31:55:1968:31:1108:-74.1424,0,-151.506	1/1:154:0,154:0:0:154:5408:-486.851,-46.3586,0	1/1:50:0,49:0:0:49:1719:-154.63,-14.7505,0	0/1:74:61,13:61:2171:13:464:-19.8199,0,-173.38	1/1:46:0,46:0:0:46:1586:-143.024,-13.8474,0	1/1:59:0,58:0:0:58:2063:-185.723,-17.4597,0	1/1:121:0,121:0:0:121:4230:-380.87,-36.4246,0	1/1:118:0,118:0:0:118:4104:-369.547,-35.5215,0	1/1:25:1,24:1:36:24:852:-73.4021,-3.92748,0	0/1:135:74,61:74:2648:61:2163:-154.298,0,-197.927	0/1:72:40,32:40:1411:32:1117:-79.1612,0,-105.612	0/1:76:52,24:52:1868:24:856:-54.4828,0,-145.521	0/1:8:5,3:5:180:3:104:-7.29457,0,-14.1438	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:5:0,5:0:0:5:167:-15.3584,-1.50515,0	0/1:16:11,5:11:396:5:180:-11.7356,0,-31.1663	0/1:153:69,83:69:2443:83:2895:-214.66,0,-174.009	0/1:95:58,37:58:2062:37:1300:-88.6973,0,-157.252	0/1:28:18,10:18:640:10:348:-23.2263,0,-49.5005	0/1:7:6,1:6:212:1:36:-1.49107,0,-17.3176	1/1:91:0,91:0:0:91:3176:-286.06,-27.3937,0	1/1:27:1,26:1:36:26:899:-77.6198,-4.52954,0	0/1:126:77,49:77:2724:49:1752:-120.034,0,-207.473	0/1:32:19,13:19:676:13:468:-32.8267,0,-51.535	0/1:52:23,29:23:820:29:1011:-75.6469,0,-58.469	1/1:103:0,103:0:0:103:3630:-326.891,-31.0061,0	0/1:95:61,34:61:2142:34:1203:-79.9772,0,-164.447	0/1:99:70,29:70:2503:29:1019:-62.2193,0,-195.72	0/1:50:32,18:32:1144:18:629:-41.8818,0,-88.218	1/1:46:0,46:0:0:46:1612:-145.358,-13.8474,0	0/1:68:33,35:33:1184:35:1236:-91.0742,0,-86.3983	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	1/1:71:0,71:0:0:71:2513:-226.421,-21.3731,0	1/1:24:0,24:0:0:24:848:-76.635,-7.22472,0	0/1:19:13,6:13:468:6:208:-13.3395,0,-36.7401	0/1:92:54,38:54:1906:38:1337:-92.9332,0,-144.122	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	0/1:7:4,3:4:136:3:99:-7.12937,0,-10.4683	0/1:10:3,7:3:108:7:244:-19.2891,0,-7.06487	0/1:66:45,21:45:1607:21:748:-47.7773,0,-125.051	1/1:97:0,97:0:0:97:3405:-306.668,-29.1999,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:46:0,46:0:0:46:1639:-147.784,-13.8474,0	1/1:93:0,93:0:0:93:3258:-293.428,-27.9958,0	0/1:35:25,10:25:884:10:356:-21.8452,0,-69.3423	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	0/1:80:55,25:55:1968:25:884:-55.796,0,-153.313	0/1:95:82,13:82:2924:13:445:-11.7741,0,-234.798	0/1:26:15,11:15:532:11:392:-27.7909,0,-40.3863	0/1:36:15,21:15:528:21:739:-55.9937,0,-37.0143	0/1:41:15,26:15:540:26:916:-70.4142,0,-36.5943	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:114:1,113:1:36:113:3963:-353.262,-30.7191,0	0/1:47:27,20:27:972:20:699:-49.0823,0,-73.6495	1/1:42:0,42:0:0:42:1491:-134.484,-12.6433,0	1/1:72:0,72:0:0:72:2527:-227.68,-21.6742,0	0/1:77:46,31:46:1648:31:1090:-75.2286,0,-125.429	0/1:55:28,27:28:1008:27:960:-70.1596,0,-74.4797	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	1/1:42:0,42:0:0:42:1471:-132.674,-12.6433,0	1/1:63:0,63:0:0:63:2223:-200.335,-18.9649,0	0/1:127:69,58:69:2468:58:2051:-146.628,0,-184.143	1/1:51:0,51:0:0:51:1773:-159.839,-15.3525,0	1/1:56:0,56:0:0:56:1956:-176.313,-16.8577,0	1/1:47:0,47:0:0:47:1630:-146.979,-14.1484,0	0/1:115:69,46:69:2451:46:1600:-109.664,0,-186.226	0/1:27:12,15:12:432:15:532:-40.0853,0,-31.0934	0/1:68:37,31:37:1316:31:1068:-75.9547,0,-98.2718	1/1:55:0,55:0:0:55:1955:-176.117,-16.5567,0	0/1:30:13,17:13:460:17:584:-43.8486,0,-32.7045	0/1:66:42,24:42:1479:24:851:-57.0388,0,-113.536	0/1:54:39,15:39:1383:15:532:-31.9575,0,-108.512	1/1:37:0,37:0:0:37:1300:-117.301,-11.1381,0	1/1:97:0,97:0:0:97:3427:-308.638,-29.1999,0
chr02	25367997	.	A	G	155746	PASS	AB=0.50857;ABP=25.6766;AC=94;AF=0.5;AN=188;AO=18070;CIGAR=1X;DP=35531;DPB=35531;DPRA=0;EPP=39224.1;EPPR=37875.7;GTI=0;LEN=1;MEANALT=1.12766;MQM=28.4843;MQMR=52.3142;NS=94;NUMALT=1;ODDS=138.886;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=639782;QR=623253;RO=17449;RPL=9110;RPP=5.71413;RPPR=8.34272;RPR=8960;RUN=1;SAF=9112;SAP=5.86025;SAR=8958;SRF=8623;SRP=8.13863;SRR=8826;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:256:110,146:110:3935:146:5161:-331.285,0,-272.395	0/1:491:216,275:216:7716:275:9714:-330.153,0,-544.508	0/1:574:261,313:261:9278:313:11042:-276.792,0,-653.185	0/1:861:391,469:391:13981:469:16518:-386.629,0,-990.726	0/1:243:131,112:131:4671:112:3960:-105.871,0,-343.65	0/1:124:62,61:62:2216:61:2143:-78.0804,0,-160.428	0/1:554:283,271:283:10080:271:9540:-220.18,0,-733.138	0/1:669:305,364:305:10898:364:12786:-342.668,0,-773.248	0/1:425:230,195:230:8217:195:6897:-221.586,0,-605.671	0/1:438:170,268:170:6069:268:9530:-252.694,0,-408.141	0/1:306:163,142:163:5830:142:5011:-209.254,0,-427.362	0/1:404:205,198:205:7299:198:7013:-230.494,0,-530.26	0/1:347:167,180:167:5965:180:6297:-182.784,0,-428.154	0/1:347:172,175:172:6129:175:6129:-164.153,0,-442.439	0/1:306:152,154:152:5440:154:5466:-136.806,0,-393.34	0/1:290:152,138:152:5379:138:4864:-134.831,0,-393.561	0/1:278:142,136:142:5037:136:4806:-140.576,0,-366.165	0/1:245:128,117:128:4556:117:4135:-137.593,0,-333.907	0/1:170:89,81:89:3184:81:2865:-134.092,0,-233.887	0/1:805:422,383:422:15082:383:13620:-501.762,0,-1101.38	0/1:542:269,273:269:9600:273:9640:-390.201,0,-693.894	0/1:266:122,144:122:4375:144:5088:-216.063,0,-308.876	0/1:377:201,176:201:7197:176:6285:-199.694,0,-527.657	0/1:404:196,207:196:7023:207:7355:-303.107,0,-507.188	0/1:368:188,179:188:6727:179:6294:-260.876,0,-489.123	0/1:1005:503,501:503:17948:501:17864:-571.156,0,-1301.42	0/1:1065:480,584:480:17186:584:20810:-900.306,0,-1213.95	0/1:125:66,59:66:2364:59:2112:-87.8079,0,-174.194	0/1:690:369,321:369:13196:321:11422:-297.421,0,-968.261	0/1:431:219,212:219:7842:212:7541:-177.083,0,-573.408	0/1:466:242,224:242:8647:224:7947:-194.091,0,-629.636	0/1:41:16,25:16:561:25:888:-31.9209,0,-38.0151	0/1:85:41,44:41:1467:44:1569:-86.7497,0,-103.331	0/1:43:21,22:21:756:22:767:-26.2751,0,-54.9477	0/1:41:32,9:32:1139:9:324:-14.8863,0,-89.6148	0/1:75:47,28:47:1684:28:1000:-31.8735,0,-127.956	0/1:808:422,386:422:15037:386:13642:-321.017,0,-1097.37	0/1:371:164,207:164:5863:207:7294:-165.369,0,-413.873	0/1:260:136,124:136:4855:124:4376:-147.821,0,-355.596	0/1:12:6,6:6:216:6:212:-7.01144,0,-15.9983	0/1:589:268,321:268:9576:321:11384:-398.289,0,-676.079	0/1:182:111,71:111:3941:71:2497:-65.1257,0,-297.031	0/1:568:268,299:268:9584:299:10628:-338.488,0,-684.166	0/1:318:158,160:158:5637:160:5665:-129.285,0,-408.594	0/1:265:140,125:140:4990:125:4447:-115.367,0,-366.441	0/1:493:242,251:242:8658:251:8835:-377.146,0,-623.6	0/1:424:202,222:202:7184:222:7877:-152.692,0,-514.734	0/1:705:363,342:363:12995:342:12052:-262.284,0,-947.414	0/1:279:127,152:127:4536:152:5385:-83.5225,0,-320.582	0/1:482:202,280:202:7251:280:9921:-325.199,0,-504.021	0/1:375:193,182:193:6919:182:6479:-180.714,0,-504.743	0/1:63:33,30:33:1175:30:1058:-22.2726,0,-86.4287	0/1:515:220,295:220:7877:295:10481:-427.235,0,-546.892	0/1:226:102,124:102:3645:124:4398:-223.402,0,-257.566	0/1:34:12,22:12:428:22:779:-25.186,0,-28.501	0/1:472:236,236:236:8452:236:8294:-249.721,0,-613.038	0/1:222:107,115:107:3848:115:4118:-178.601,0,-277.49	0/1:29:11,18:11:396:18:644:-15.4264,0,-26.9815	0/1:75:33,42:33:1188:42:1477:-52.7823,0,-84.0448	0/1:288:154,134:154:5516:134:4792:-156.138,0,-405.145	0/1:424:212,212:212:7532:212:7513:-314.449,0,-544.827	0/1:54:20,34:20:716:34:1193:-52.6823,0,-47.9267	0/1:578:293,285:293:10499:285:10178:-381.198,0,-762.646	0/1:704:268,436:268:9608:436:15421:-758.398,0,-645.379	0/1:283:129,154:129:4620:154:5457:-154.149,0,-328.792	0/1:314:181,133:181:6471:133:4731:-159.672,0,-482.062	0/1:553:301,252:301:10753:252:8911:-195.174,0,-789.066	0/1:383:201,182:201:7159:182:6473:-158.356,0,-524.653	0/1:245:125,120:125:4457:120:4258:-131.884,0,-323.253	0/1:232:94,138:94:3368:138:4934:-151.105,0,-231.346	0/1:341:177,164:177:6315:164:5838:-117.731,0,-462.569	0/1:89:44,45:44:1568:45:1584:-64.2514,0,-110.712	0/1:370:180,190:180:6420:190:6669:-343.236,0,-455.592	0/1:316:141,175:141:5052:175:6179:-172.672,0,-352.543	0/1:803:413,389:413:14727:389:13810:-706.025,0,-1067.18	0/1:578:255,323:255:9144:323:11445:-452.914,0,-642.757	0/1:430:225,205:225:8061:205:7231:-190.373,0,-589.591	0/1:517:252,265:252:8974:265:9402:-225.357,0,-645.219	0/1:54:30,24:30:1076:24:855:-33.8946,0,-80.0228	0/1:504:206,298:206:7375:298:10583:-400.123,0,-509.106	0/1:458:222,236:222:7930:236:8365:-341.058,0,-571.593	0/1:774:352,422:352:12572:422:14949:-396.228,0,-888.733	0/1:329:161,168:161:5764:168:5919:-213.888,0,-416.659	0/1:334:199,135:199:7116:135:4774:-224.868,0,-535.303	0/1:352:180,172:180:6419:172:6068:-180.522,0,-469.436	0/1:608:326,281:326:11597:281:9949:-222.332,0,-853.074	0/1:171:94,77:94:3343:77:2715:-57.5313,0,-247.283	0/1:286:152,134:152:5412:134:4722:-122.156,0,-396.079	0/1:315:151,164:151:5375:164:5754:-256.734,0,-386.14	0/1:243:121,122:121:4324:122:4317:-142.265,0,-312.858	0/1:428:222,205:222:7899:205:7211:-208.032,0,-574.739	0/1:343:189,154:189:6741:154:5485:-103.976,0,-499.14	0/1:462:227,235:227:8098:235:8278:-439.668,0,-582.168	0/1:444:233,211:233:8327:211:7473:-300.294,0,-608.134
chr02	25368003	.	T	A	119072	PASS	AB=0.371308;ABP=5072.82;AC=94;AF=0.5;AN=188;AO=13086;CIGAR=1X;DP=35243;DPB=35243;DPRA=0;EPP=28418.9;EPPR=48057.7;GTI=0;LEN=1;MEANALT=1.18085;MQM=35.0867;MQMR=43.0262;NS=94;NUMALT=1;ODDS=8.15153;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=467703;QR=787574;RO=22134;RPL=6632;RPP=8.2679;RPPR=3.80496;RPR=6454;RUN=1;SAF=6632;SAP=8.2679;SAR=6454;SRF=11021;SRP=3.84067;SRR=11113;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:262:112,150:112:3975:150:5348:-344.048,0,-273.901	0/1:484:215,269:215:7642:269:9626:-325.292,0,-540.072	0/1:564:412,152:412:14633:152:5447:-122.467,0,-792.253	0/1:853:646,207:646:22974:207:7408:-144.861,0,-1228.99	0/1:241:192,49:192:6847:49:1760:-46.3668,0,-398.592	0/1:124:95,29:95:3396:29:1030:-50.974,0,-192.56	0/1:548:430,118:430:15321:118:4216:-71.2719,0,-863.312	0/1:675:484,191:484:17267:191:6806:-168.858,0,-941.804	0/1:416:309,107:309:10957:107:3789:-137.868,0,-661.279	0/1:433:288,145:288:10251:145:5203:-132.4,0,-511.707	0/1:306:161,144:161:5702:144:5132:-216.42,0,-415.567	0/1:404:287,117:287:10233:117:4158:-146.686,0,-612.092	0/1:346:257,89:257:9090:89:3186:-89.0035,0,-519.137	0/1:342:253,89:253:8965:89:3187:-83.8931,0,-509.69	0/1:306:236,69:236:8403:69:2471:-54.3185,0,-473.147	0/1:293:224,68:224:7895:68:2411:-65.3305,0,-458.893	0/1:275:139,136:139:4919:136:4820:-145.037,0,-354.235	0/1:242:124,118:124:4411:118:4179:-140.583,0,-322.357	0/1:166:85,81:85:3039:81:2880:-137.088,0,-222.18	0/1:787:562,225:562:20013:225:8062:-355.636,0,-1199.56	0/1:541:265,276:265:9476:276:9904:-401.147,0,-682.083	0/1:267:120,147:120:4282:147:5263:-220.637,0,-299.562	0/1:373:271,101:271:9648:101:3636:-131.05,0,-584.419	0/1:399:190,209:190:6769:209:7438:-306.55,0,-485.138	0/1:367:186,181:186:6634:181:6469:-259.945,0,-481.749	0/1:994:491,501:491:17514:501:17901:-586.657,0,-1257.13	0/1:1065:473,591:473:16827:591:21138:-914.734,0,-1182.1	0/1:122:62,60:62:2203:60:2156:-89.9689,0,-160.698	0/1:690:528,162:528:18778:162:5806:-160.438,0,-1107.08	0/1:430:321,109:321:11422:109:3887:-67.9077,0,-671.011	0/1:450:324,126:324:11557:126:4509:-96.9481,0,-688.944	0/1:41:25,16:25:900:16:576:-23.3437,0,-45.9169	0/1:82:39,43:39:1400:43:1540:-86.4228,0,-98.274	0/1:43:21,22:21:733:22:769:-26.2529,0,-52.926	0/1:39:30,9:30:1048:9:324:-15.4883,0,-82.1275	0/1:73:61,12:61:2176:12:432:-14.9756,0,-141.73	0/1:806:626,179:626:22291:179:6411:-129.295,0,-1279.85	0/1:370:270,100:270:9664:100:3581:-59.9651,0,-517.902	0/1:261:191,70:191:6792:70:2497:-99.2747,0,-402.356	0/1:12:10,2:10:360:2:72:-3.22436,0,-19.855	0/1:588:267,320:267:9507:320:11491:-401.811,0,-665.92	0/1:181:145,36:145:5159:36:1288:-31.5908,0,-331.009	0/1:559:410,147:410:14592:147:5253:-191.815,0,-796.319	0/1:313:228,85:228:8106:85:3036:-56.9826,0,-468.842	0/1:262:201,61:201:7150:61:2184:-57.3811,0,-424.164	0/1:486:240,246:240:8526:246:8765:-379.149,0,-609.285	0/1:419:307,110:307:10920:110:3943:-42.3665,0,-606.649	0/1:708:541,167:541:19263:167:5979:-90.6262,0,-1119.36	0/1:274:206,68:206:7311:68:2429:-5.52346,0,-384.247	0/1:483:201,282:201:7181:282:10112:-327.596,0,-497.401	0/1:370:267,103:267:9523:103:3684:-105.718,0,-561.433	0/1:60:46,14:46:1627:14:504:-8.77312,0,-98.494	0/1:514:216,298:216:7686:298:10648:-437.393,0,-528.045	0/1:226:99,127:99:3532:127:4518:-223.815,0,-247.512	0/1:33:21,12:21:752:12:432:-15.6647,0,-37.9346	0/1:461:343,118:343:12243:118:4189:-129.529,0,-709.553	0/1:216:104,112:104:3691:112:4017:-180.861,0,-263.117	0/1:25:18,7:18:636:7:252:-5.99736,0,-29.3819	0/1:75:54,21:54:1923:21:747:-30.8668,0,-106.011	0/1:276:211,65:211:7515:65:2331:-85.584,0,-443.801	0/1:420:208,212:208:7405:212:7597:-315.525,0,-534.468	0/1:55:21,34:21:756:34:1215:-53.2786,0,-51.0952	0/1:586:295,291:295:10484:291:10424:-387.717,0,-756.615	0/1:703:266,437:266:9482:437:15576:-768.594,0,-634.437	0/1:279:204,75:204:7212:75:2688:-74.5531,0,-389.259	0/1:308:176,132:176:6261:132:4735:-161.051,0,-467.279	0/1:545:407,138:407:14473:138:4941:-84.9214,0,-877.019	0/1:375:312,62:312:11142:62:2224:-43.3118,0,-626.164	0/1:241:175,65:175:6216:65:2321:-75.6165,0,-363.303	0/1:231:162,69:162:5779:69:2480:-77.3045,0,-294.827	0/1:344:256,85:256:9089:85:3005:-43.0229,0,-527.079	0/1:86:41,45:41:1460:45:1600:-67.7019,0,-103.616	0/1:359:169,190:169:6055:190:6780:-354.894,0,-429.373	0/1:313:223,90:223:7943:90:3219:-87.8642,0,-432.263	0/1:808:410,397:410:14558:397:14228:-719.593,0,-1050.45	0/1:582:253,329:253:8996:329:11758:-464.322,0,-628.5	0/1:421:309,110:309:11016:110:3924:-100.366,0,-640.366	0/1:518:378,140:378:13463:140:5019:-95.8159,0,-769.352	0/1:52:42,10:42:1508:10:342:-15.4552,0,-92.4569	0/1:502:203,299:203:7238:299:10700:-412.637,0,-497.622	0/1:463:220,243:220:7803:243:8673:-355.318,0,-555.799	0/1:763:525,238:525:18705:238:8524:-228.163,0,-1027.12	0/1:323:161,162:161:5726:162:5789:-201.845,0,-412.891	0/1:337:201,136:201:7111:136:4860:-227.41,0,-534.225	0/1:348:177,171:177:6265:171:6131:-186.443,0,-457.133	0/1:603:466,135:466:16579:135:4800:-85.4282,0,-975.599	0/1:169:132,37:132:4687:37:1310:-18.4886,0,-277.698	0/1:288:227,61:227:8042:61:2149:-42.6031,0,-470.004	0/1:312:148,164:148:5205:164:5888:-264.753,0,-369.763	0/1:239:174,65:174:6215:65:2332:-79.6102,0,-365.114	0/1:429:324,105:324:11487:105:3725:-115.354,0,-666.459	0/1:327:283,44:283:10062:44:1580:-6.53094,0,-556.013	0/1:454:219,235:219:7817:235:8405:-448.292,0,-560.237	0/1:439:227,212:227:8084:212:7531:-304.573,0,-586.212
chr02	25368015	.	C	T	189281	PASS	AB=0.512349;ABP=43.7166;AC=94;AF=0.5;AN=188;AO=15745;CIGAR=1X;DP=30731;DPB=30731;DPRA=0;EPP=6743.48;EPPR=6078.59;GTI=0;LEN=1;MEANALT=1.06383;MQM=31.0615;MQMR=51.2172;NS=94;NUMALT=1;ODDS=132.668;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=562333;QR=532510;RO=14980;RPL=11171;RPP=6005.13;RPPR=5365.12;RPR=4574;RUN=1;SAF=6794;SAP=644.681;SAR=8951;SRF=6278;SRP=854.752;SRR=8702;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:211:92,119:92:3257:119:4216:-316.1,0,-225.172	0/1:147:54,93:54:1940:93:3302:-253.134,0,-128.57	0/1:287:141,146:141:5015:146:5205:-204.879,0,-357.037	0/1:856:385,471:385:13694:471:16757:-402.768,0,-965.748	0/1:238:125,113:125:4469:113:4056:-112.446,0,-327.032	0/1:108:57,51:57:2040:51:1817:-72.8496,0,-149.332	0/1:549:277,272:277:9788:272:9695:-219.041,0,-709.073	0/1:297:142,155:142:5080:155:5529:-264.781,0,-362.861	0/1:282:152,129:152:5383:129:4593:-203.544,0,-393.742	0/1:429:166,263:166:5835:263:9353:-242.914,0,-390.286	0/1:302:162,140:162:5739:140:4993:-213.972,0,-420.2	0/1:258:133,125:133:4723:125:4472:-204.382,0,-341.445	0/1:187:96,91:96:3394:91:3252:-145.157,0,-245.253	0/1:340:168,172:168:5982:172:6146:-165.984,0,-431.541	0/1:304:151,153:151:5362:153:5496:-137.178,0,-386.914	0/1:287:147,140:147:5242:140:5016:-140.145,0,-378.955	0/1:82:42,40:42:1495:40:1428:-101.877,0,-104.302	0/1:90:50,40:50:1788:40:1436:-102.445,0,-132.329	0/1:91:45,46:45:1616:46:1633:-119.863,0,-116.739	0/1:798:417,381:417:14830:381:13610:-502.867,0,-1070.82	0/1:533:261,272:261:9286:272:9726:-397.985,0,-668.134	0/1:261:118,143:118:4197:143:5132:-215.963,0,-293.69	0/1:376:202,174:202:7147:174:6196:-201.412,0,-523.818	0/1:393:189,204:189:6706:204:7312:-304.233,0,-481.456	0/1:364:181,183:181:6461:183:6541:-267.196,0,-467.196	0/1:973:477,496:477:16833:496:17648:-577.256,0,-1211.09	0/1:1041:458,583:458:16347:583:20857:-907.486,0,-1146.3	0/1:124:63,61:63:2237:61:2196:-92.6087,0,-163.134	0/1:685:358,327:358:12779:327:11658:-310.457,0,-935.197	0/1:421:213,208:213:7596:208:7435:-174.946,0,-554.305	0/1:456:235,221:235:8350:221:7902:-191.687,0,-605.556	0/1:40:14,26:14:504:26:932:-33.4797,0,-33.1892	0/1:86:42,44:42:1500:44:1580:-86.1149,0,-106.326	0/1:21:13,8:13:468:8:288:-19.9458,0,-35.6612	0/1:34:26,8:26:932:8:284:-15.6683,0,-73.0348	0/1:54:32,22:32:1152:22:786:-32.1417,0,-86.518	0/1:782:402,380:402:14305:380:13604:-325.738,0,-1038.4	0/1:352:150,202:150:5372:202:7224:-167.786,0,-375.466	0/1:145:64,81:64:2284:81:2908:-148.383,0,-156.96	0/1:11:5,6:5:180:6:216:-7.31421,0,-13.0602	0/1:584:267,317:267:9509:317:11358:-393.627,0,-669.009	0/1:181:110,71:110:3927:71:2531:-66.1952,0,-295.947	0/1:560:259,301:259:9253:301:10776:-355.855,0,-656.46	0/1:310:154,156:154:5458:156:5592:-127.701,0,-394.251	0/1:260:133,127:133:4715:127:4524:-124.051,0,-342.605	0/1:496:246,250:246:8736:250:8916:-386.291,0,-626.365	0/1:160:97,63:97:3439:63:2235:-70.582,0,-257.468	0/1:686:349,336:349:12348:336:12044:-266.335,0,-895.097	0/1:269:119,150:119:4197:150:5371:-87.7281,0,-293.246	0/1:481:200,281:200:7126:281:10036:-324.144,0,-492.952	0/1:370:188,182:188:6665:182:6493:-178.004,0,-483.07	0/1:61:33,28:33:1171:28:1004:-21.3631,0,-86.6256	0/1:248:121,127:121:4340:127:4533:-331.23,0,-309.382	0/1:234:103,131:103:3650:131:4649:-233.389,0,-255.542	0/1:14:4,10:4:144:10:360:-17.157,0,-8.95246	0/1:462:224,238:224:7954:238:8483:-265.425,0,-571.819	0/1:209:100,109:100:3497:109:3895:-170.011,0,-250.06	0/1:30:12,18:12:416:18:644:-15.1254,0,-27.66	0/1:76:33,43:33:1168:43:1540:-53.4083,0,-82.0216	0/1:284:151,133:151:5404:133:4741:-154.896,0,-394.592	0/1:414:207,207:207:7338:207:7382:-305.511,0,-528.038	0/1:53:20,33:20:697:33:1176:-53.2694,0,-46.5587	0/1:578:286,292:286:10182:292:10474:-395.824,0,-732.296	0/1:698:263,435:263:9338:435:15532:-779.117,0,-622.951	0/1:285:129,156:129:4612:156:5576:-155.837,0,-327.283	0/1:309:178,131:178:6298:131:4660:-154.968,0,-468.947	0/1:543:292,250:292:10362:250:8905:-195.442,0,-758.731	0/1:374:193,180:193:6843:180:6440:-157.941,0,-499.098	0/1:238:116,122:116:4124:122:4349:-138.237,0,-295.526	0/1:124:49,75:49:1756:75:2688:-120.12,0,-118.965	0/1:341:173,168:173:6097:168:5997:-125.354,0,-440.91	0/1:84:41,43:41:1434:43:1540:-62.367,0,-102.443	0/1:240:115,125:115:4132:125:4445:-327.966,0,-295.312	0/1:154:72,82:72:2584:82:2932:-130.171,0,-180.784	0/1:801:405,396:405:14376:396:14154:-729.618,0,-1036.16	0/1:569:247,322:247:8752:322:11544:-450.172,0,-610.596	0/1:178:103,74:103:3662:74:2644:-137.532,0,-268.25	0/1:146:61,85:61:2146:85:3047:-153.921,0,-145.598	0/1:49:24,25:24:849:25:877:-37.7387,0,-61.1515	0/1:495:197,298:197:7048:298:10673:-413.363,0,-482.669	0/1:210:96,114:96:3369:114:4058:-299.938,0,-236.743	0/1:759:339,420:339:12063:420:14957:-398.978,0,-849.64	0/1:327:162,165:162:5745:165:5884:-207.297,0,-415.595	0/1:328:193,135:193:6909:135:4826:-231.204,0,-518.477	0/1:339:167,172:167:5944:172:6155:-187.376,0,-428.562	0/1:595:312,282:312:11127:282:10045:-235.587,0,-810.626	0/1:60:30,30:30:1067:30:1076:-45.2223,0,-76.1584	0/1:140:75,65:75:2656:65:2332:-98.6752,0,-193.112	0/1:160:74,86:74:2636:86:3076:-226.651,0,-186.555	0/1:234:115,119:115:4087:119:4267:-136.245,0,-294.65	0/1:420:214,206:214:7638:206:7330:-222.187,0,-554.005	0/1:333:181,152:181:6489:152:5452:-107.641,0,-477.728	0/1:453:218,235:218:7737:235:8405:-448.595,0,-552.664	0/1:430:225,205:225:7988:205:7280:-291.407,0,-584.439
chr02	25436282	.	C	T	312983	PASS	AB=0.514385;ABP=25.1887;AC=129;AF=0.68617;AN=188;AO=15415;CIGAR=1X;DP=22422;DPB=22422;DPRA=0;EPP=33224.8;EPPR=14928.9;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9803;MQMR=59.967;NS=94;NUMALT=1;ODDS=14.5469;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=544639;QR=250485;RO=7005;RPL=15386;RPP=33224.8;RPPR=14937.5;RPR=29;RUN=1;SAF=0;SAP=33476.3;SAR=15415;SRF=1;SRP=15205.5;SRR=7004;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:99:0,99:0:0:99:3477:-313.146,-29.802,0	1/1:107:0,107:0:0:107:3800:-342.201,-32.2102,0	0/1:177:85,92:85:3036:92:3240:-238.544,0,-220.185	0/1:236:113,123:113:4032:123:4337:-319.468,0,-292.019	0/1:80:36,44:36:1292:44:1547:-115.439,0,-92.5014	0/1:45:9,36:9:320:36:1265:-100.604,0,-15.596	0/1:79:21,58:21:752:58:2033:-159.46,0,-44.2249	0/1:171:80,91:80:2876:91:3232:-239.628,0,-207.593	0/1:154:88,66:88:3147:66:2333:-163.87,0,-237.096	0/1:110:58,52:58:2071:52:1840:-132.767,0,-153.547	1/1:354:1,353:1:36:353:12593:-1129.61,-102.966,0	0/1:118:53,65:53:1892:65:2280:-169.938,0,-135.037	0/1:85:40,45:40:1432:45:1612:-119.783,0,-103.59	0/1:48:21,27:21:756:27:964:-72.6274,0,-53.9178	0/1:76:32,44:32:1139:44:1572:-118.893,0,-79.9401	0/1:109:57,52:57:2044:52:1848:-133.788,0,-151.42	1/1:37:0,37:0:0:37:1303:-117.555,-11.1381,0	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:142:0,142:0:0:142:5064:-455.907,-42.7463,0	0/1:147:59,88:59:2101:88:3069:-232.188,0,-145.105	1/1:167:0,167:0:0:167:5916:-532.555,-50.272,0	1/1:146:0,146:0:0:146:5161:-464.637,-43.9504,0	0/1:156:73,83:73:2620:83:2921:-216.166,0,-189.087	1/1:99:0,99:0:0:99:3490:-314.313,-29.802,0	1/1:132:0,132:0:0:132:4632:-416.966,-39.736,0	1/1:374:0,374:0:0:374:13253:-1192.59,-112.585,0	1/1:317:0,317:0:0:317:11120:-1000.72,-95.4265,0	1/1:40:0,40:0:0:40:1412:-127.377,-12.0412,0	0/1:372:152,220:152:5460:220:7744:-585.025,0,-379.543	0/1:52:13,39:13:468:39:1388:-109.565,0,-26.8061	0/1:122:62,60:62:2216:60:2067:-149.571,0,-162.979	0/0:659:638,21:638:22805:21:736:0,-131.816,-1985.28	1/1:529:3,526:3:108:526:18583:-1661.99,-149.17,0	1/1:875:1,874:1:36:874:30881:-2774.75,-259.803,0	1/1:2572:1,2571:1:36:2571:90893:-8173.28,-770.651,0	0/1:1325:532,793:532:19021:793:28062:-2125.94,0,-1312.28	0/1:183:80,103:80:2868:103:3652:-273.799,0,-203.268	0/1:155:68,87:68:2423:87:3084:-231.131,0,-171.666	0/1:220:172,48:172:6151:48:1724:-89.2188,0,-487.185	0/1:596:308,287:308:11016:287:10125:-731.672,0,-811.861	1/1:78:1,77:1:36:77:2724:-241.807,-19.8821,0	0/1:185:76,109:76:2736:109:3868:-292.628,0,-190.791	0/1:248:114,134:114:4048:134:4725:-350.76,0,-289.853	0/1:75:21,54:21:756:54:1940:-152.299,0,-45.79	0/1:62:29,33:29:1035:33:1184:-88.2045,0,-74.7969	1/1:160:0,160:0:0:160:5673:-510.693,-48.1648,0	0/1:149:69,80:69:2476:80:2824:-209.548,0,-178.24	0/1:195:79,116:79:2820:116:4096:-310.131,0,-195.337	0/1:86:38,48:38:1352:48:1704:-127.757,0,-96.0918	1/1:135:1,134:1:36:134:4745:-423.614,-37.0408,0	0/1:138:59,79:59:2116:79:2710:-202.595,0,-149.167	0/1:825:448,377:448:16014:377:13136:-933.74,0,-1192.59	1/1:179:1,178:1:36:178:6270:-560.806,-50.2861,0	1/1:70:0,70:0:0:70:2498:-225.073,-21.0721,0	0/0:184:171,13:171:6119:13:464:0,-13.292,-508.713	0/1:142:46,96:46:1648:96:3362:-260.054,0,-105.862	1/1:73:0,73:0:0:73:2600:-234.249,-21.9752,0	0/1:1033:513,520:513:18329:520:18349:-1340.06,0,-1338.23	0/1:333:243,90:243:8621:90:3146:-183.124,0,-675.646	0/1:85:31,54:31:1095:54:1889:-144.699,0,-73.2715	1/1:110:1,109:1:36:109:3881:-345.887,-29.515,0	1/1:276:2,274:2:72:274:9519:-849.862,-76.2476,0	1/1:144:2,142:2:72:142:5028:-445.836,-36.5116,0	1/1:189:0,189:0:0:189:6619:-595.577,-56.8947,0	0/1:97:39,58:39:1404:58:2052:-155.752,0,-97.4594	1/1:141:1,140:1:36:140:4908:-438.283,-38.847,0	0/1:196:96,100:96:3428:100:3560:-261.608,0,-249.733	0/1:303:223,80:223:7974:80:2828:-163.549,0,-626.47	0/0:205:186,19:186:6653:19:676:0,-0.54315,-537.679	0/1:81:47,34:47:1676:34:1200:-83.9222,0,-126.744	0/1:52:26,26:26:932:26:917:-67.191,0,-68.5453	1/1:265:0,265:0:0:265:9356:-842.019,-79.773,0	1/1:100:0,100:0:0:100:3560:-320.61,-30.103,0	0/1:89:31,58:31:1108:58:2036:-156.721,0,-73.2393	1/1:188:1,187:1:36:187:6597:-590.219,-52.9954,0	1/1:250:0,250:0:0:250:8802:-792.186,-75.2575,0	0/1:146:74,72:74:2652:72:2560:-186.701,0,-194.785	0/1:124:54,70:54:1936:70:2468:-185.048,0,-137.189	0/1:1178:578,599:578:20675:599:21193:-1552.19,0,-1504.46	1/1:131:2,129:2:72:129:4520:-400.139,-32.5982,0	1/1:102:0,102:0:0:102:3608:-324.93,-30.7051,0	0/1:182:92,90:92:3300:90:3176:-231.28,0,-242.431	1/1:54:0,54:0:0:54:1928:-173.797,-16.2556,0	1/1:96:1,95:1:32:95:3388:-301.937,-25.6996,0	1/1:60:0,60:0:0:60:2136:-192.508,-18.0618,0	0/1:175:84,91:84:3008:91:3248:-239.862,0,-218.271	0/1:34:18,16:18:648:16:576:-41.94,0,-48.4169	0/1:78:36,42:36:1288:42:1495:-111.364,0,-92.7432	0/1:87:37,50:37:1328:50:1788:-135.013,0,-93.6326	0/1:371:175,196:175:6263:196:6968:-515.509,0,-452.082	0/1:692:349,343:349:12497:343:12204:-889.901,0,-916.116	0/1:82:53,29:53:1896:29:1028:-68.1486,0,-146.234	1/1:67:1,66:1:36:66:2340:-207.257,-16.5707,0	1/1:129:0,129:0:0:129:4596:-413.807,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chr02	25436291	.	TGAT	TGAC,CGAC	480358	PASS	AB=0.508433,0.486932;ABP=10.7376,21.5694;AC=129,59;AF=0.68617,0.31383;AN=188;AO=15519,7120;CIGAR=3M1X,1X2M1X;DP=22748;DPB=22748.2;DPRA=0,2.10145;EPP=33702.1,15463.9;EPPR=26.8965;GTI=0;LEN=1,4;MEANALT=2.5,2.98485;MQM=59.9797,59.9678;MQMR=60;NS=94;NUMALT=2;ODDS=14.3621;PAIRED=0,0;PAIREDR=0;PAO=0,2;PQA=0,68;PQR=0;PRO=0;QA=554208,251694;QR=382;RO=11;RPL=15519,7120;RPP=33702.1,15463.9;RPPR=26.8965;RPR=0,0;RUN=1,1;SAF=0,0;SAP=33702.1,15463.9;SAR=15519,7120;SRF=0;SRP=26.8965;SRR=11;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:97:0,97,0:0:0:97,0:3451,0:-310.804,-29.1999,0,-310.804,-29.1999,-310.804	1/1:106:0,106,0:0:0:106,0:3765,0:-339.048,-31.9092,0,-339.048,-31.9092,-339.048	1/2:185:0,94,87:0:0:94,87:3368,3047:-522.653,-247.966,-219.67,-274.735,0,-248.545	1/2:235:0,119,114:0:0:119,114:4256,4029:-675.162,-328.121,-292.298,-347.037,0,-312.719	1/2:81:0,44,37:0:0:44,37:1576,1318:-236.313,-107.783,-94.5381,-128.886,0,-117.748	1/2:44:0,35,9:0:0:35,9:1252,311:-127.716,-25.6148,-15.0788,-102.449,0,-99.7398	1/2:80:0,58,22:0:0:58,22:2084,788:-234.634,-64.6225,-47.1627,-170.37,0,-163.748	1/2:176:0,89,85:0:0:89,85:3184,2980:-502.121,-242.482,-215.691,-259.633,0,-234.045	1/2:156:0,65,89:0:0:65,89:2316,3154:-445.714,-256.935,-237.368,-188.774,0,-161.982	1/2:112:0,54,57:0:0:54,57:1928,2011:-320.989,-163.802,-147.547,-157.24,0,-140.081	1/1:350:0,349,1:0:0:349,1:12443,36:-1119.35,-105.059,0,-1116.41,-101.762,-1116.11	1/2:120:0,65,55:0:0:65,55:2320,1942:-347.629,-158.499,-138.932,-189.485,0,-172.929	1/2:86:0,46,39:0:0:46,39:1648,1378:-246.624,-112.218,-98.3709,-134.401,0,-122.661	1/2:49:0,26,23:0:0:26,23:927,802:-141.142,-65.5738,-57.7471,-75.9206,0,-68.9969	1/2:78:0,44,32:0:0:44,32:1580,1140:-221.858,-92.9673,-79.722,-128.939,0,-119.306	1/2:108:0,51,57:0:0:51,57:1809,2022:-312.476,-165.093,-149.741,-147.737,0,-130.578	1/1:36:0,36,0:0:0:36,0:1274,0:-114.961,-10.8371,0,-114.961,-10.8371,-114.961	1/1:48:0,48,0:0:0:48,0:1702,0:-153.464,-14.4494,0,-153.464,-14.4494,-153.464	1/1:143:0,143,0:0:0:143,0:5124,0:-461.302,-43.0473,0,-461.302,-43.0473,-461.302	1/2:148:0,87,60:0:0:87,60:3124,2101:-425.778,-170.936,-144.746,-254.836,0,-236.774	1/1:169:0,167,0:0:0:167,0:5972,0:-537.228,-50.272,0,-537.228,-50.272,-537.228	1/1:147:0,147,0:0:0:147,0:5249,0:-472.547,-44.2514,0,-472.547,-44.2514,-472.547	1/2:160:0,83,75:0:0:83,75:2959,2646:-456.652,-215.45,-190.465,-241.197,0,-218.62	1/1:98:0,98,0:0:0:98,0:3504,0:-315.571,-29.5009,0,-315.571,-29.5009,-315.571	1/1:138:0,138,0:0:0:138,0:4924,0:-443.275,-41.5421,0,-443.275,-41.5421,-443.275	1/1:385:0,380,0:0:0:380,0:13565,0:-1220.33,-114.391,0,-1220.33,-114.391,-1220.33	1/1:333:0,333,0:0:0:333,0:11872,0:-1068.34,-100.243,0,-1068.34,-100.243,-1068.34	1/1:41:0,39,0:0:0:39,0:1400,0:-125.939,-11.7402,0,-125.939,-11.7402,-125.939	1/2:378:0,221,155:0:0:221,155:7924,5537:-1097.73,-451.437,-384.91,-646.295,0,-599.636	1/2:55:0,44,11:0:0:44,11:1548,394:-158.497,-32.4902,-19.2449,-126.364,0,-123.052	1/2:130:0,64,66:0:0:64,66:2296,2312:-375.754,-188.473,-169.207,-187.635,0,-167.767	2/2:666:0,20,639:0:0:20,639:697,22560:-2029.49,-1972.81,-1966.79,-192.358,-135.684,0	1/1:539:0,534,3:0:0:534,3:19061,108:-1714.7,-160.75,0,-1705.89,-151.905,-1704.99	1/1:893:0,889,1:0:0:889,1:31725,36:-2853.91,-267.616,0,-2850.98,-264.669,-2850.68	1/1:2607:0,2587,6:0:0:2587,6:92310,212:-8303.14,-778.765,0,-8285.88,-761.49,-8284.07	1/2:1351:1,801,546:1:36:801,546:28671,19221:-3899.59,-1561.83,-1323.64,-2335.19,0,-2173.77	1/2:184:0,103,81:0:0:103,81:3687,2867:-534.554,-233.884,-202.878,-301.026,0,-276.643	1/2:157:0,86,70:0:0:86,70:3073,2470:-451.786,-201.23,-175.342,-250.659,0,-229.587	1/2:226:0,50,175:0:0:50,175:1788,6180:-648.969,-503.175,-488.123,-145.791,0,-93.1111	1/2:606:0,290,316:0:0:290,316:10351,11183:-1754.98,-911.247,-823.948,-844.083,0,-748.958	1/1:80:0,80,0:0:0:80,0:2819,0:-253.952,-24.0824,0,-253.952,-24.0824,-253.952	1/2:188:0,110,78:0:0:110,78:3912,2779:-545.675,-226.871,-193.758,-319.16,0,-295.679	1/2:252:1,133,118:1:36:133,118:4756,4157:-723.005,-335.499,-298.399,-384.864,0,-352.28	1/2:75:0,53,22:0:0:53,22:1893,770:-217.339,-62.9973,-47.0427,-154.694,0,-148.071	1/2:61:0,31,30:0:0:31,30:1099,1054:-175.644,-86.138,-76.8061,-89.8591,0,-80.8282	1/1:162:1,161,0:1:30:161,0:5756,0:-515.157,-45.7673,0,-515.458,-48.4658,-517.856	1/2:151:0,81,68:0:0:81,68:2886,2420:-432.522,-197.284,-172.901,-235.292,0,-214.822	1/2:198:0,116,81:0:0:116,81:4160,2848:-571.214,-231.905,-196.985,-339.392,0,-315.008	1/2:86:1,45,40:1:36:45,40:1605,1386:-240.234,-109.694,-99.0854,-127.895,0,-118.791	1/1:141:0,139,1:0:0:139,1:4929,36:-443.442,-41.8432,0,-440.504,-38.8658,-440.203	1/2:139:0,80,59:0:0:80,59:2853,2102:-404.233,-171.688,-147.606,-232.901,0,-215.14	1/2:838:0,379,454:0:0:379,454:13545,16098:-2415.94,-1311.54,-1197.45,-1104.44,0,-967.77	1/1:188:1,187,0:1:36:187,0:6707,0:-600.105,-52.9954,0,-600.406,-56.2926,-603.343	1/1:66:0,65,0:0:0:65,0:2321,0:-208.789,-19.567,0,-208.789,-19.567,-208.789	2/2:190:0,12,177:0:0:12,177:43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chr02	25448514	.	GCA	GCG	50593.2	PASS	AB=0.452621;ABP=136.552;AC=55;AF=0.292553;AN=188;AO=3121;CIGAR=2M1X;DP=12079;DPB=12079;DPRA=1.20857;EPP=6736.82;EPPR=19229.6;GTI=2;LEN=1;MEANALT=1.27941;MQM=59.9837;MQMR=59.9861;NS=94;NUMALT=1;ODDS=1.38767;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111467;QR=314097;RO=8930;RPL=3121;RPP=6780.18;RPPR=19333.5;RPR=0;RUN=1;SAF=5;SAP=6736.82;SAR=3116;SRF=12;SRP=19290.2;SRR=8918;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.869	0/0:171:170,0:170:5993:0:0:0,-51.1751,-539.118	0/1:118:54,63:54:1919:63:2244:-166.762,0,-137.522	0/1:361:149,212:149:5215:212:7572:-572.849,0,-360.823	0/1:98:36,62:36:1285:62:2220:-170.563,0,-86.452	0/1:98:54,44:54:1935:44:1580:-112.991,0,-144.926	0/1:157:87,69:87:3046:69:2472:-175.522,0,-227.158	0/1:217:128,89:128:4414:89:3180:-221.101,0,-332.115	0/1:98:49,49:49:1718:49:1756:-128.823,0,-125.403	0/1:80:38,42:38:1333:42:1504:-111.572,0,-96.1856	0/0:106:105,1:105:3700:1:36:0,-28.3109,-329.605	0/1:107:57,49:57:1992:49:1752:-125.695,0,-147.282	0/1:109:56,53:56:1988:53:1883:-136.936,0,-146.38	0/1:126:63,63:63:2202:63:2249:-164.743,0,-160.512	0/1:92:47,45:47:1672:45:1616:-118.035,0,-123.072	0/1:91:36,55:36:1243:55:1968:-150.001,0,-84.7734	0/0:130:130,0:130:4594:0:0:0,-39.1339,-413.625	0/0:99:97,2:97:3442:2:72:0,-22.9652,-303.157	0/0:58:58,0:58:2047:0:0:0,-17.4597,-184.501	0/1:196:137,59:137:4847:59:2104:-130.628,0,-377.386	0/0:227:226,0:226:7894:0:0:0,-68.0328,-710.136	0/0:78:78,0:78:2789:0:0:0,-23.4803,-251.251	0/1:101:69,32:69:2428:32:1152:-73.5861,0,-188.351	0/0:201:201,0:201:6984:0:0:0,-60.507,-628.637	0/0:85:85,0:85:2983:0:0:0,-25.5875,-268.703	0/0:190:188,1:188:6634:1:36:0,-53.6562,-593.546	0/0:266:264,2:264:9280:2:72:0,-73.2373,-828.344	0/0:53:53,0:53:1884:0:0:0,-15.9546,-169.838	0/1:292:183,109:183:6377:109:3904:-263.653,0,-486.126	0/1:187:87,99:87:3082:99:3537:-262.187,0,-221.257	0/1:220:142,78:142:5030:78:2767:-183.045,0,-386.625	0/1:13:6,7:6:214:7:252:-19.1156,0,-15.6944	0/0:14:14,0:14:499:0:0:0,-4.21442,-45.2456	0/0:13:13,0:13:462:0:0:0,-3.91339,-41.9162	0/0:24:24,0:24:847:0:0:0,-7.22472,-76.5493	0/1:16:11,5:11:394:5:180:-11.7356,0,-30.985	0/1:278:131,147:131:4648:147:5271:-390.838,0,-334.797	0/1:151:86,65:86:2988:65:2324:-163.965,0,-223.695	0/1:89:47,42:47:1635:42:1491:-107.692,0,-120.641	0/1:9:6,3:6:214:3:108:-7.3659,0,-16.8985	0/0:323:322,1:322:11227:1:36:0,-93.6344,-1006.74	0/1:61:26,35:26:909:35:1256:-94.9825,0,-63.7602	0/1:191:142,48:142:4997:48:1703:-95.9998,0,-392.327	0/1:141:72,68:72:2550:68:2444:-177.858,0,-187.394	0/1:98:56,42:56:1962:42:1500:-105.794,0,-147.351	0/0:147:147,0:147:5137:0:0:0,-44.2514,-462.478	0/1:146:90,56:90:3185:56:1984:-134.884,0,-242.924	0/1:231:130,100:130:4584:100:3549:-250.024,0,-343.129	0/1:112:73,39:73:2583:39:1392:-91.8637,0,-199.003	0/0:243:242,1:242:8523:1:36:0,-69.552,-763.321	0/1:168:95,73:95:3379:73:2595:-183.225,0,-253.754	0/1:16:14,2:14:495:2:72:-2.02024,0,-40.0666	0/0:159:159,0:159:5626:0:0:0,-47.8638,-506.466	0/0:71:71,0:71:2456:0:0:0,-21.3731,-221.294	0/1:19:9,10:9:322:10:360:-27.0247,0,-23.6046	0/1:161:99,61:99:3420:61:2148:-145.061,0,-259.491	0/0:67:67,0:67:2350:0:0:0,-20.169,-211.757	0/0:20:19,1:19:665:1:36:0,-2.42232,-56.5753	0/1:13:7,3:7:240:3:108:-6.70504,0,-18.5693	0/1:103:68,35:68:2422:35:1244:-81.2586,0,-187.228	0/0:155:153,2:153:5421:2:72:0,-39.8229,-481.185	0/0:26:26,0:26:920:0:0:0,-7.82678,-83.1167	0/0:218:218,0:218:7658:0:0:0,-65.6245,-689.262	0/0:276:273,3:273:9541:3:108:0,-73.0091,-848.593	0/1:112:72,40:72:2545:40:1428:-95.1022,0,-195.584	0/0:99:99,0:99:3479:0:0:0,-29.802,-313.323	0/1:122:76,45:76:2670:45:1603:-107.882,0,-203.866	0/1:115:35,79:35:1243:79:2836:-220.801,0,-77.4961	0/1:56:37,18:37:1292:18:648:-41.7354,0,-99.6623	0/1:115:67,48:67:2352:48:1711:-119.657,0,-177.32	0/1:109:50,59:50:1788:59:2104:-156.817,0,-128.39	0/0:35:35,0:35:1244:0:0:0,-10.536,-112.264	0/0:102:100,2:100:3484:2:72:0,-23.8683,-306.936	0/1:85:42,43:42:1499:43:1548:-114.026,0,-109.616	0/0:315:313,1:313:10979:1:36:0,-91.285,-984.428	0/0:200:198,0:198:7003:0:0:0,-59.6039,-629.98	0/1:123:82,41:82:2888:41:1476:-96.1095,0,-223.131	0/1:154:82,71:82:2896:71:2536:-182.074,0,-214.46	0/1:22:13,9:13:456:9:320:-22.5197,0,-34.7502	0/0:170:169,0:169:5902:0:0:0,-50.8741,-530.937	0/0:52:51,1:51:1798:1:36:0,-12.0553,-158.502	0/1:194:106,88:106:3705:88:3147:-225.056,0,-275.252	0/0:151:151,0:151:5349:0:0:0,-45.4555,-481.545	0/0:111:111,0:111:3929:0:0:0,-33.4143,-353.789	0/0:170:169,0:169:5966:0:0:0,-50.8741,-536.691	0/1:254:135,119:135:4795:119:4234:-304.781,0,-355.247	0/1:58:29,29:29:1010:29:1040:-76.4546,0,-73.75	0/1:114:52,62:52:1778:62:2206:-163.996,0,-125.977	0/1:88:49,37:49:1742:37:1319:-92.718,0,-130.816	0/1:91:46,45:46:1630:45:1611:-117.886,0,-119.594	0/1:153:80,73:80:2794:73:2620:-189.99,0,-205.642	0/1:120:36,81:36:1259:81:2883:-224.152,0,-78.0556	0/0:192:192,0:192:6781:0:0:0,-57.7978,-610.369	0/0:180:177,3:177:6234:3:108:0,-44.1102,-551.091
chr02	25492018	.	A	G	60271.4	PASS	AB=0.512323;ABP=12.055;AC=56;AF=0.297872;AN=188;AO=3535;CIGAR=1X;DP=11758;DPB=11758;DPRA=1.29806;EPP=7635.8;EPPR=17700.9;GTI=1;LEN=1;MEANALT=1.01587;MQM=59.976;MQMR=59.9884;NS=94;NUMALT=1;ODDS=4.73123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126222;QR=293493;RO=8222;RPL=3531;RPP=7644.46;RPPR=17700.9;RPR=4;RUN=1;SAF=1;SAP=7670.48;SAR=3534;SRF=0;SRP=17856.9;SRR=8222;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:60:60,0:60:2129:0:0:0,-18.0618,-191.877	0/0:189:188,1:188:6727:1:36:0,-53.2964,-601.906	0/1:149:77,72:77:2756:72:2564:-186.145,0,-203.428	0/1:245:107,138:107:3828:138:4952:-372.076,0,-270.965	0/1:68:36,32:36:1283:32:1148:-82.3812,0,-95.3026	0/1:68:37,31:37:1309:31:1104:-79.2006,0,-97.6395	0/1:138:83,55:83:2948:55:1971:-136.122,0,-224.011	0/1:242:95,147:95:3384:147:5245:-399.338,0,-231.917	0/1:137:73,64:73:2582:64:2304:-166.379,0,-191.386	0/1:172:83,89:83:2976:89:3170:-233.747,0,-216.295	0/0:91:91,0:91:3268:0:0:0,-27.3937,-294.34	0/1:106:51,55:51:1828:55:1967:-145.395,0,-132.892	0/1:94:51,43:51:1832:43:1518:-108.615,0,-136.864	0/1:193:97,96:97:3476:96:3401:-248.198,0,-254.953	0/1:90:56,34:56:2003:34:1224:-83.3743,0,-153.45	0/1:72:34,38:34:1224:38:1352:-100.306,0,-88.7929	0/0:109:109,0:109:3915:0:0:0,-32.8123,-352.541	0/0:125:125,0:125:4484:0:0:0,-37.6287,-403.728	0/0:62:61,1:61:2192:1:36:0,-15.0656,-193.947	0/1:166:84,82:84:2997:82:2927:-213.694,0,-219.99	0/0:182:182,0:182:6505:0:0:0,-54.7875,-585.534	0/0:63:63,0:63:2244:0:0:0,-18.9649,-202.224	0/1:131:73,58:73:2605:58:2073:-147.404,0,-195.262	0/0:73:72,1:72:2592:1:36:0,-18.3769,-229.925	0/0:67:67,0:67:2372:0:0:0,-20.169,-213.736	0/0:352:351,1:351:12458:1:36:0,-102.364,-1116.98	0/0:163:163,0:163:5793:0:0:0,-49.0679,-521.486	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/1:318:161,157:161:5769:157:5602:-408.574,0,-423.595	0/1:210:113,97:113:4033:97:3453:-247.766,0,-299.941	0/1:178:86,92:86:3038:92:3273:-241.206,0,-220.066	0/1:9:7,2:7:252:2:68:-3.74844,0,-20.3197	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:13:5,8:5:180:8:288:-22.3401,0,-12.6387	0/1:273:134,139:134:4788:139:4961:-364.456,0,-348.896	0/1:228:105,122:105:3722:122:4355:-323.588,0,-266.643	0/1:127:61,66:61:2171:66:2342:-172.808,0,-157.425	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/0:162:162,0:162:5773:0:0:0,-48.7669,-519.686	0/1:64:34,30:34:1220:30:1067:-77.0753,0,-90.8409	0/1:109:44,65:44:1545:65:2324:-176.608,0,-106.528	0/1:126:63,63:63:2260:63:2252:-165.013,0,-165.733	0/1:67:36,31:36:1288:31:1112:-80.2223,0,-96.0546	0/0:133:133,0:133:4766:0:0:0,-40.037,-429.095	0/1:155:81,74:81:2885:74:2651:-192.176,0,-213.226	0/1:228:121,107:121:4320:107:3824:-275.721,0,-320.343	0/1:122:53,69:53:1896:69:2463:-185.199,0,-134.192	0/0:93:93,0:93:3291:0:0:0,-27.9958,-296.407	0/1:177:82,95:82:2936:95:3393:-252.303,0,-211.192	0/1:25:16,9:16:572:9:318:-21.4346,0,-44.2877	0/0:188:188,0:188:6748:0:0:0,-56.5936,-607.392	0/0:78:78,0:78:2781:0:0:0,-23.4803,-250.53	0/1:18:12,6:12:424:6:216:-14.372,0,-33.0779	0/1:171:80,91:80:2841:91:3248:-241.066,0,-204.452	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/1:15:8,7:8:288:7:252:-18.5135,0,-21.752	0/1:29:14,15:14:500:15:536:-39.8449,0,-36.6063	0/1:76:41,35:41:1464:35:1240:-89.0262,0,-109.178	0/0:165:165,0:165:5916:0:0:0,-49.6699,-532.548	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:206:206,0:206:7376:0:0:0,-62.0122,-663.887	0/0:234:232,2:232:8274:2:72:0,-63.6043,-737.831	0/1:56:32,24:32:1148:24:844:-59.4194,0,-86.7722	0/0:99:95,4:95:3392:4:144:0,-16.4884,-292.182	0/0:243:237,6:237:8443:6:216:0,-53.3598,-740.088	0/1:152:36,116:36:1269:116:4125:-325.678,0,-68.7542	0/1:55:20,35:20:712:35:1247:-95.9774,0,-47.85	0/1:81:44,37:44:1568:37:1319:-94.6277,0,-116.992	0/1:129:68,61:68:2423:61:2192:-158.713,0,-179.493	0/0:45:45,0:45:1597:0:0:0,-13.5463,-144.018	0/0:141:141,0:141:5013:0:0:0,-42.4452,-451.316	0/1:91:41,50:41:1468:50:1781:-133.177,0,-105.022	0/0:412:411,1:411:14658:1:36:0,-120.426,-1315.37	0/0:170:170,0:170:6032:0:0:0,-51.1751,-542.983	0/1:148:89,59:89:3188:59:2101:-144.806,0,-242.591	0/1:159:59,100:59:2104:100:3567:-273.374,0,-141.766	0/1:17:9,8:9:324:8:284:-20.7858,0,-24.3883	0/0:110:110,0:110:3891:0:0:0,-33.1133,-350.383	0/0:141:141,0:141:5033:0:0:0,-42.4452,-453.116	0/1:270:137,133:137:4886:133:4760:-347.279,0,-358.612	0/0:156:156,0:156:5584:0:0:0,-46.9607,-502.683	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.955	0/0:120:120,0:120:4304:0:0:0,-36.1236,-387.536	0/1:196:102,94:102:3648:94:3363:-243.884,0,-269.153	0/1:54:27,27:27:964:27:972:-71.5423,0,-70.8212	0/1:110:50,60:50:1784:60:2160:-161.553,0,-127.729	0/1:101:41,60:41:1464:60:2156:-163.903,0,-101.652	0/1:107:50,57:50:1784:57:2030:-150.761,0,-128.633	0/1:225:114,111:114:4084:111:3981:-290.747,0,-300.014	0/1:97:30,67:30:1072:67:2394:-186.516,0,-67.5925	0/0:114:114,0:114:4073:0:0:0,-34.3174,-366.755	0/0:126:126,0:126:4524:0:0:0,-37.9298,-407.326
chr02	25569605	.	C	T	144929	PASS	AB=0.503125;ABP=3.47174;AC=133;AF=0.707447;AN=188;AO=6995;CIGAR=1X;DP=9708;DPB=9708;DPRA=0;EPP=15192.5;EPPR=5892.04;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9838;MQMR=59.9926;NS=94;NUMALT=1;ODDS=0.71342;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=250335;QR=96947;RO=2712;RPL=0;RPP=15192.5;RPPR=5892.04;RPR=6995;RUN=1;SAF=6995;SAP=15192.5;SAR=0;SRF=2712;SRP=5892.04;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	1/1:206:0,206:0:0:206:7400:-666.043,-62.0122,0	0/1:127:50,77:50:1780:77:2764:-210.77,0,-122.252	0/1:209:114,95:114:4084:95:3377:-241.23,0,-304.83	0/1:57:19,38:19:680:38:1352:-104.82,0,-44.3705	0/1:100:37,63:37:1320:63:2260:-173.56,0,-88.9989	0/1:140:81,59:81:2900:59:2098:-146.888,0,-219.092	0/1:164:80,84:80:2852:84:3001:-220.951,0,-207.55	0/1:114:62,52:62:2208:52:1862:-133.542,0,-164.668	0/1:112:47,65:47:1676:65:2333:-176.514,0,-117.412	1/1:86:0,86:0:0:86:3080:-277.428,-25.8886,0	0/1:56:26,30:26:936:30:1072:-79.9348,0,-67.7018	0/1:49:24,25:24:864:25:896:-66.2099,0,-63.3321	0/1:177:87,90:87:3104:90:3223:-237.009,0,-226.306	0/1:53:29,24:29:1036:24:851:-60.9549,0,-77.5993	0/1:63:34,29:34:1220:29:1040:-74.9495,0,-91.1419	1/1:117:0,117:0:0:117:4200:-378.094,-35.2205,0	1/1:57:1,56:1:36:56:1997:-176.404,-13.5604,0	1/1:58:0,58:0:0:58:2084:-187.83,-17.4597,0	0/1:177:85,92:85:3040:92:3296:-243.577,0,-220.548	1/1:264:2,262:2:72:262:9335:-833.278,-72.6352,0	1/1:78:0,78:0:0:78:2796:-251.88,-23.4803,0	0/1:32:17,15:17:608:15:532:-38.5801,0,-45.4191	1/1:99:0,99:0:0:99:3552:-319.888,-29.802,0	1/1:62:0,62:0:0:62:2232:-201.139,-18.6639,0	1/1:264:0,263:0:0:263:9412:-846.832,-79.1709,0	1/1:243:0,243:0:0:243:8716:-784.429,-73.1503,0	1/1:31:0,31:0:0:31:1112:-100.391,-9.33193,0	0/1:225:119,106:119:4268:106:3812:-275.544,0,-316.566	0/1:210:94,116:94:3360:116:4142:-309.744,0,-239.401	0/1:158:69,89:69:2449:89:3172:-238.143,0,-173.101	0/1:10:2,8:2:72:8:268:-21.4347,0,-3.82642	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:13:0,13:0:0:13:449:-40.7375,-3.91339,0	0/1:18:10,8:10:356:8:284:-20.4848,0,-26.9627	0/1:152:74,78:74:2652:78:2793:-205.853,0,-193.17	0/1:162:73,89:73:2612:89:3192:-238.736,0,-186.561	0/1:98:50,48:50:1780:48:1722:-125.764,0,-130.982	0/1:12:5,7:5:180:7:252:-19.4166,0,-12.9397	1/1:147:1,146:1:36:146:5236:-467.778,-40.6531,0	0/1:45:16,29:16:564:29:1044:-80.5381,0,-37.544	0/1:136:56,80:56:2004:80:2838:-214.716,0,-139.693	0/1:74:40,34:40:1424:34:1204:-86.3891,0,-106.181	0/1:39:22,17:22:792:17:603:-42.8593,0,-59.8655	1/1:55:0,55:0:0:55:1972:-177.755,-16.5567,0	0/1:103:56,47:56:2000:47:1688:-121.201,0,-149.268	0/1:126:58,68:58:2084:68:2428:-180.845,0,-149.9	0/1:82:48,34:48:1716:34:1216:-85.0621,0,-130.041	1/1:224:0,224:0:0:224:8005:-720.471,-67.4307,0	0/1:117:61,56:61:2192:56:2008:-145.773,0,-162.325	0/1:32:14,18:14:489:18:644:-48.6576,0,-34.7059	1/1:137:0,137:0:0:137:4906:-441.691,-41.2411,0	1/1:55:0,55:0:0:55:1968:-177.395,-16.5567,0	0/1:20:13,7:13:468:7:252:-17.0084,0,-36.439	0/1:129:73,56:73:2624:56:1993:-140.809,0,-197.574	1/1:35:0,35:0:0:35:1244:-112.265,-10.5361,0	0/1:25:15,10:15:540:10:360:-25.2186,0,-41.4108	0/1:23:9,14:9:324:14:504:-38.7744,0,-22.5822	0/1:190:103,87:103:3660:87:3116:-223.471,0,-272.404	1/1:130:0,130:0:0:130:4664:-419.92,-39.1339,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:163:0,163:0:0:163:5850:-526.598,-49.0679,0	1/1:163:1,162:1:36:162:5806:-519.055,-45.4696,0	0/1:116:53,63:53:1900:63:2268:-169.463,0,-136.358	1/1:67:0,67:0:0:67:2377:-214.187,-20.169,0	1/1:179:1,178:1:36:178:6380:-570.69,-50.2861,0	0/1:138:92,46:92:3296:46:1652:-107.426,0,-255.317	0/1:53:27,26:27:972:26:926:-67.7031,0,-71.8433	0/1:76:37,39:37:1332:39:1400:-103.421,0,-97.3041	0/1:83:35,48:35:1260:48:1728:-130.82,0,-88.72	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	1/1:68:0,68:0:0:68:2433:-219.224,-20.47,0	0/1:36:9,27:9:324:27:972:-76.9608,0,-18.6688	1/1:398:1,397:1:36:397:14191:-1273.34,-116.212,0	1/1:133:0,133:0:0:133:4764:-428.917,-40.037,0	0/1:199:107,92:107:3816:92:3300:-237.314,0,-283.734	0/1:140:63,77:63:2240:77:2760:-206.497,0,-159.72	0/1:27:14,13:14:504:13:468:-34.3318,0,-37.5703	1/1:132:0,132:0:0:132:4740:-426.757,-39.736,0	1/1:108:0,108:0:0:108:3842:-345.975,-32.5112,0	0/1:163:83,80:83:2964:80:2849:-207.579,0,-217.926	1/1:98:1,97:1:36:97:3479:-309.722,-25.9027,0	1/1:80:0,80:0:0:80:2849:-256.647,-24.0824,0	1/1:84:0,84:0:0:84:3001:-270.322,-25.2865,0	0/1:131:70,61:70:2492:61:2165:-155.682,0,-185.099	0/1:42:22,20:22:792:20:720:-52.4855,0,-58.9624	0/1:64:33,31:33:1184:31:1116:-81.4858,0,-87.5942	0/1:55:25,30:25:887:30:1076:-80.5962,0,-63.5915	0/1:90:48,42:48:1716:42:1503:-108.471,0,-127.633	0/1:157:78,79:78:2791:79:2840:-208.576,0,-204.168	0/1:54:35,19:35:1239:19:680:-45.2735,0,-95.558	1/1:66:0,66:0:0:66:2372:-213.738,-19.868,0	1/1:60:1,59:1:32:59:2100:-186.07,-14.8625,0
chr02	25569655	.	G	T	104403	PASS	AB=0.487144;ABP=16.6331;AC=55;AF=0.292553;AN=188;AO=4635;CIGAR=1X;DP=16440;DPB=16440;DPRA=1.10938;EPP=10059.1;EPPR=25596;GTI=0;LEN=1;MEANALT=1.08065;MQM=59.9922;MQMR=59.9862;NS=94;NUMALT=1;ODDS=18.0823;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164856;QR=419773;RO=11798;RPL=2633;RPP=189.547;RPPR=707.19;RPR=2002;RUN=1;SAF=2632;SAP=188.366;SAR=2003;SRF=6874;SRP=702.877;SRR=4924;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:71:71,0:71:2534:0:0:0,-21.3731,-228.31	0/0:257:257,0:257:9160:0:0:0,-77.3647,-824.373	0/1:264:147,117:147:5236:117:4146:-293.854,0,-391.906	0/1:400:194,206:194:6894:206:7386:-544.374,0,-500.119	0/1:79:46,33:46:1652:33:1172:-82.0061,0,-125.187	0/1:147:84,63:84:2972:63:2248:-158.332,0,-223.461	0/1:252:126,126:126:4428:126:4501:-329.398,0,-322.836	0/1:294:162,132:162:5750:132:4703:-334.929,0,-429.115	0/1:259:141,118:141:5036:118:4182:-298.597,0,-375.421	0/1:177:93,84:93:3310:84:2999:-216.86,0,-244.836	0/0:120:120,0:120:4227:0:0:0,-36.1236,-380.614	0/1:169:92,76:92:3277:76:2693:-191.681,0,-244.216	0/1:152:78,74:78:2788:74:2615:-189.842,0,-205.404	0/1:228:109,119:109:3895:119:4226:-311.887,0,-282.109	0/1:144:76,68:76:2719:68:2417:-174.437,0,-201.605	0/1:117:59,58:59:2073:58:2076:-151.89,0,-151.619	0/0:145:145,0:145:5156:0:0:0,-43.6493,-464.096	0/0:83:83,0:83:2940:0:0:0,-24.9855,-264.834	0/0:94:94,0:94:3309:0:0:0,-28.2968,-298.028	0/1:289:138,151:138:4897:151:5373:-396.705,0,-353.885	0/0:388:388,0:388:13796:0:0:0,-116.8,-1241.42	0/0:176:176,0:176:6241:0:0:0,-52.9813,-561.788	0/1:99:47,52:47:1652:52:1843:-136.348,0,-119.163	0/0:153:153,0:153:5433:0:0:0,-46.0576,-489.1	0/0:149:149,0:149:5314:0:0:0,-44.8535,-478.395	0/0:408:408,0:408:14550:0:0:0,-122.82,-1309.25	0/0:457:457,0:457:16267:0:0:0,-137.571,-1463.71	0/0:63:63,0:63:2252:0:0:0,-18.9649,-202.943	0/1:401:203,198:203:7251:198:7085:-516.994,0,-531.926	0/1:256:147,109:147:5244:109:3874:-271.792,0,-395.033	0/1:229:128,101:128:4540:101:3567:-252.301,0,-339.83	0/1:16:10,6:10:360:6:201:-13.6006,0,-27.9278	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:35:17,18:17:612:18:644:-47.7545,0,-44.8774	0/1:328:172,156:172:6108:156:5527:-398.821,0,-451.087	0/1:231:127,103:127:4544:103:3671:-260.997,0,-339.53	0/1:143:68,75:68:2427:75:2643:-195.068,0,-175.638	0/1:14:8,6:8:284:6:212:-15.2104,0,-21.6889	0/0:259:259,0:259:9170:0:0:0,-77.9668,-825.275	0/1:70:36,34:36:1284:34:1206:-87.7724,0,-94.7913	0/1:327:180,147:180:6405:147:5201:-369.794,0,-478.102	0/1:106:51,55:51:1806:55:1954:-144.225,0,-130.911	0/1:100:47,53:47:1688:53:1883:-139.645,0,-122.104	0/0:165:165,0:165:5867:0:0:0,-49.6699,-528.14	0/1:190:99,90:99:3543:90:3207:-231.599,0,-261.824	0/1:285:136,149:136:4867:149:5314:-392.602,0,-352.388	0/1:158:81,77:81:2874:77:2746:-199.82,0,-211.246	0/0:279:279,0:279:9950:0:0:0,-83.9874,-895.438	0/1:269:138,131:138:4930:131:4657:-338.314,0,-362.873	0/1:37:22,15:22:773:15:540:-37.7984,0,-58.7514	0/0:183:182,0:182:6496:0:0:0,-54.7875,-584.447	0/0:107:107,0:107:3826:0:0:0,-32.2102,-344.536	0/1:27:7,20:7:248:20:716:-56.6399,0,-14.5364	0/1:218:100,116:100:3551:116:4134:-306.861,0,-254.418	0/0:83:83,0:83:2923:0:0:0,-24.9855,-263.302	0/1:27:10,17:10:360:17:612:-47.2856,0,-24.6165	0/1:30:15,15:15:536:15:516:-37.7325,0,-39.5439	0/1:262:120,142:120:4291:142:5039:-374.787,0,-307.497	0/0:212:212,0:212:7591:0:0:0,-63.8184,-683.228	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:291:290,1:290:10272:1:36:0,-84.0015,-920.802	0/0:228:226,1:226:8031:1:36:0,-65.0204,-719.289	0/1:178:115,63:115:4097:63:2260:-150.079,0,-315.332	0/0:141:138,3:138:4913:3:108:0,-32.3701,-432.245	0/0:264:264,0:264:9407:0:0:0,-79.4719,-846.403	0/1:212:85,127:85:3040:127:4522:-343.331,0,-210.012	0/1:76:35,41:35:1243:41:1468:-109.538,0,-89.2956	0/1:122:58,64:58:2060:64:2281:-168.825,0,-148.943	0/1:130:77,53:77:2730:53:1899:-132.054,0,-206.809	0/0:50:50,0:50:1762:0:0:0,-15.0515,-158.862	0/0:206:205,1:205:7279:1:34:0,-58.6133,-650.152	0/1:112:70,42:70:2492:42:1500:-101.579,0,-190.816	0/0:507:504,3:504:17952:3:99:0,-143.386,-1606.06	0/0:262:262,0:262:9339:0:0:0,-78.8699,-840.478	0/1:254:111,143:111:3943:143:5077:-380.614,0,-278.6	0/1:190:101,89:101:3616:89:3161:-227.521,0,-268.45	0/1:36:20,16:20:707:16:567:-40.5243,0,-53.1175	0/0:195:193,2:193:6869:2:72:0,-51.8641,-611.443	0/0:193:193,0:193:6874:0:0:0,-58.0988,-618.729	0/1:342:168,174:168:5976:174:6181:-453.435,0,-434.997	0/0:143:143,0:143:5075:0:0:0,-43.0473,-456.896	0/0:145:145,0:145:5164:0:0:0,-43.6493,-464.901	0/0:119:119,0:119:4243:0:0:0,-35.8226,-382.05	0/1:241:127,114:127:4463:114:4031:-290.432,0,-329.292	0/1:54:27,27:27:953:27:951:-69.6487,0,-69.8277	0/1:125:64,61:64:2253:61:2162:-157.208,0,-165.403	0/1:127:74,53:74:2629:53:1908:-133.767,0,-198.626	0/1:127:60,67:60:2131:67:2395:-177.576,0,-153.827	0/1:217:111,106:111:3941:106:3756:-272.916,0,-289.56	0/1:118:45,73:45:1612:73:2591:-197.918,0,-109.849	0/0:112:112,0:112:4007:0:0:0,-33.7154,-360.819	0/0:162:161,1:161:5721:1:32:0,-45.5675,-511.811
chr02	25569657	.	G	C	308742	PASS	AB=0.508483;ABP=8.97889;AC=133;AF=0.707447;AN=188;AO=11795;CIGAR=1X;DP=16507;DPB=16507;DPRA=0;EPP=25589.5;EPPR=10200.2;GTI=0;LEN=1;MEANALT=1.12766;MQM=59.9782;MQMR=59.997;NS=94;NUMALT=1;ODDS=17.5997;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=417482;QR=166253;RO=4700;RPL=6965;RPP=842.185;RPPR=132.79;RPR=4830;RUN=1;SAF=6962;SAP=837.474;SAR=4833;SRF=2614;SRP=131.813;SRR=2086;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:70:0,70:0:0:70:2437:-219.582,-21.0721,0	1/1:257:0,257:0:0:257:9140:-822.577,-77.3647,0	0/1:272:120,151:120:4271:151:5334:-398.337,0,-302.71	0/1:404:209,194:209:7379:194:6854:-495.259,0,-542.488	0/1:78:31,47:31:1091:47:1680:-128.007,0,-75.0184	0/1:145:61,84:61:2176:84:2984:-225.145,0,-152.457	0/1:253:130,123:130:4635:123:4364:-316.746,0,-341.154	0/1:286:126,160:126:4502:160:5612:-419.112,0,-319.253	0/1:254:116,138:116:4074:138:4881:-362.984,0,-290.389	0/1:177:85,92:85:3020:92:3265:-240.788,0,-218.747	1/1:119:0,119:0:0:119:4248:-382.5,-35.8226,0	0/1:168:77,91:77:2715:91:3223:-239.721,0,-194.02	0/1:155:76,79:76:2686:79:2812:-206.661,0,-195.323	0/1:233:121,112:121:4289:112:3943:-284.923,0,-316.05	0/1:148:71,77:71:2532:77:2748:-203.01,0,-183.579	0/1:119:61,58:61:2122:58:2053:-149.218,0,-155.421	1/1:145:0,145:0:0:145:5133:-462.028,-43.6494,0	1/1:83:0,83:0:0:83:2942:-265.015,-24.9855,0	1/1:93:0,93:0:0:93:3261:-293.711,-27.9958,0	0/1:299:156,143:156:5506:143:5089:-368.148,0,-405.659	1/1:384:1,383:1:36:383:13607:-1220.83,-111.997,0	1/1:176:0,176:0:0:176:6258:-563.316,-52.9813,0	0/1:101:54,47:54:1906:47:1655:-118.83,0,-141.412	1/1:153:0,153:0:0:153:5382:-484.516,-46.0576,0	1/1:150:1,149:1:36:149:5300:-473.537,-41.5562,0	1/1:414:0,413:0:0:413:14589:-1312.41,-124.325,0	1/1:460:0,459:0:0:459:16314:-1467.58,-138.173,0	1/1:60:0,60:0:0:60:2136:-192.506,-18.0618,0	0/1:400:199,201:199:7101:201:7122:-520.629,0,-518.738	0/1:262:110,151:110:3874:151:5371:-404.673,0,-270.005	0/1:231:104,127:104:3696:127:4479:-333.743,0,-263.304	0/1:16:6,10:6:216:10:360:-27.9278,0,-14.974	1/1:30:0,30:0:0:30:1067:-96.3412,-9.0309,0	1/1:17:0,17:0:0:17:599:-54.2381,-5.11751,0	1/1:23:0,23:0:0:23:810:-73.219,-6.92369,0	0/1:37:20,16:20:698:16:572:-40.6167,0,-51.9451	0/1:328:157,171:157:5535:171:6029:-443.984,0,-399.542	0/1:233:107,126:107:3775:126:4385:-324.685,0,-269.811	0/1:141:72,69:72:2538:69:2464:-179.569,0,-186.224	0/1:14:6,8:6:203:8:280:-21.3249,0,-14.3868	1/1:261:0,260:0:0:260:9188:-826.538,-78.2678,0	0/1:67:31,36:31:1107:36:1260:-93.3404,0,-79.7711	0/1:333:155,177:155:5461:177:6262:-463.455,0,-391.397	0/1:108:58,50:58:2053:50:1780:-127.972,0,-152.529	0/1:103:54,49:54:1912:49:1694:-121.733,0,-141.349	1/1:165:0,164:0:0:164:5797:-521.486,-49.3689,0	0/1:190:91,99:91:3215:99:3526:-260.354,0,-232.377	0/1:289:150,139:150:5311:139:4837:-348.49,0,-391.128	0/1:155:77,78:77:2729:78:2741:-200.186,0,-199.193	1/1:281:0,281:0:0:281:9950:-895.449,-84.5894,0	0/1:268:131,137:131:4661:137:4899:-360.386,0,-338.977	0/1:39:16,23:16:568:23:810:-61.4801,0,-39.7117	1/1:185:0,184:0:0:184:6481:-583.022,-55.3895,0	1/1:108:0,108:0:0:108:3828:-344.718,-32.5112,0	0/1:29:21,8:21:740:8:273:-16.1703,0,-58.1935	0/1:216:118,98:118:4157:98:3452:-245.872,0,-309.293	1/1:82:0,82:0:0:82:2891:-260.426,-24.6845,0	0/1:28:18,10:18:629:10:345:-22.952,0,-48.5049	0/1:30:15,15:15:527:15:536:-39.5439,0,-38.7293	0/1:264:143,121:143:5079:121:4303:-307.977,0,-377.782	1/1:212:1,211:1:36:211:7470:-668.745,-60.2201,0	1/1:15:0,15:0:0:15:527:-47.7602,-4.51545,0	1/1:294:1,293:1:36:293:10347:-927.537,-84.9045,0	1/1:231:1,230:1:36:230:8114:-726.684,-65.9397,0	0/1:174:63,111:63:2225:111:3923:-300.883,0,-148.134	1/1:140:2,138:2:72:138:4890:-433.416,-35.3075,0	1/1:263:0,263:0:0:263:9328:-839.469,-79.1709,0	0/1:214:130,84:130:4574:84:2952:-201.492,0,-347.407	0/1:77:41,36:41:1456:36:1260:-90.5203,0,-108.157	0/1:121:63,58:63:2229:58:2054:-148.706,0,-164.448	0/1:127:54,73:54:1908:73:2577:-193.948,0,-133.764	1/1:51:0,51:0:0:51:1823:-164.35,-15.3525,0	1/1:205:0,205:0:0:205:7293:-655.807,-61.7112,0	0/1:117:47,70:47:1636:70:2476:-187.872,0,-112.302	1/1:514:3,511:3:108:511:18157:-1623.6,-144.654,0	1/1:261:0,260:0:0:260:9240:-831.216,-78.2678,0	0/1:250:142,108:142:5031:108:3832:-269.82,0,-377.684	0/1:201:95,106:95:3279:106:3758:-277.915,0,-234.822	0/1:36:16,20:16:568:20:716:-53.9306,0,-40.6148	1/1:193:1,192:1:36:192:6733:-602.454,-54.5005,0	1/1:192:0,192:0:0:192:6849:-616.479,-57.7978,0	0/1:342:178,164:178:6284:164:5820:-420.959,0,-462.707	1/1:142:1,141:1:36:141:4986:-445.296,-39.148,0	1/1:143:0,143:0:0:143:5106:-459.684,-43.0473,0	1/1:117:0,117:0:0:117:4142:-372.967,-35.2205,0	0/1:244:115,129:115:4082:129:4524:-333.88,0,-294.117	0/1:55:28,27:28:989:27:944:-68.7147,0,-72.7654	0/1:124:61,63:61:2154:63:2208:-161.656,0,-156.796	0/1:127:54,73:54:1919:73:2603:-196.287,0,-134.756	0/1:126:66,60:66:2330:60:2111:-152.327,0,-172.03	0/1:218:106,112:106:3768:112:3941:-289.258,0,-273.697	0/1:122:75,46:75:2668:46:1644:-111.552,0,-203.668	1/1:107:0,107:0:0:107:3789:-341.21,-32.2102,0	1/1:163:1,162:1:32:162:5710:-510.822,-45.8686,0
chr02	25609471	.	G	A	39576.3	PASS	AB=0.598257;ABP=320.493;AC=55;AF=0.292553;AN=188;AO=2277;CIGAR=1X;DP=5858;DPB=5858;DPRA=1.63525;EPP=4947.45;EPPR=7763.86;GTI=4;LEN=1;MEANALT=1.03175;MQM=59.9877;MQMR=59.9916;NS=94;NUMALT=1;ODDS=0.790539;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80998;QR=127427;RO=3578;RPL=2277;RPP=4947.45;RPPR=7763.86;RPR=0;RUN=1;SAF=2277;SAP=4947.45;SAR=0;SRF=3578;SRP=7772.54;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:41:41,0:41:1457:0:0:0,-12.3422,-131.424	0/1:76:43,33:43:1523:33:1160:-81.8265,0,-114.484	0/1:298:140,158:140:4994:158:5602:-414.598,0,-359.902	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.8309	0/1:61:30,31:30:1061:31:1103:-81.217,0,-77.4365	0/1:66:23,43:23:815:43:1544:-119.385,0,-53.8028	0/1:73:30,43:30:1076:43:1536:-116.558,0,-75.1777	0/1:60:37,23:37:1328:23:820:-56.0607,0,-101.76	0/0:42:42,0:42:1487:0:0:0,-12.6433,-134.124	0/1:98:32,66:32:1140:66:2320:-179.561,0,-73.4083	0/1:86:34,52:34:1203:52:1844:-140.352,0,-82.6865	0/1:95:41,54:41:1464:54:1920:-144.479,0,-103.458	0/1:57:17,40:17:612:40:1420:-110.939,0,-38.2547	0/1:62:14,48:14:504:48:1698:-134.441,0,-27.0342	0/0:44:44,0:44:1544:0:0:0,-13.2453,-139.091	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/1:104:51,53:51:1828:53:1880:-138.169,0,-133.494	0/0:98:97,1:97:3459:1:36:0,-25.9027,-307.925	0/0:48:48,0:48:1712:0:0:0,-14.4494,-154.366	0/1:70:8,62:8:288:62:2211:-178.181,0,-5.19531	0/0:82:81,0:81:2895:0:0:0,-24.3834,-260.426	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/0:139:139,0:139:4968:0:0:0,-41.8432,-447.267	0/0:105:104,1:104:3728:1:36:0,-28.0099,-332.122	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:99:39,59:39:1400:59:2108:-160.129,0,-96.4384	0/1:71:20,51:20:720:51:1824:-143.068,0,-43.7556	0/1:65:33,32:33:1184:32:1135:-82.8918,0,-87.3014	0/1:15:10,5:10:360:5:180:-12.0366,0,-28.2289	0/0:20:20,0:20:703:0:0:0,-6.0206,-63.5935	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/1:16:4,12:4:144:12:432:-34.4047,0,-8.49714	0/1:216:99,117:99:3494:117:4146:-308.303,0,-249.649	0/1:96:46,50:46:1644:50:1779:-131.493,0,-119.35	0/1:59:28,31:28:987:31:1100:-81.5495,0,-71.3823	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:132:132,0:132:4724:0:0:0,-39.736,-425.319	0/1:32:18,14:18:644:14:504:-36.0651,0,-48.6576	0/1:77:30,47:30:1076:47:1680:-128.308,0,-73.9735	0/1:41:16,25:16:563:25:896:-68.6181,0,-38.6569	0/1:54:22,32:22:780:32:1132:-85.933,0,-54.2674	0/0:77:76,1:76:2715:1:36:0,-19.581,-240.995	0/1:49:31,18:31:1104:18:644:-43.5401,0,-84.9202	0/1:126:46,80:46:1643:80:2860:-219.708,0,-110.228	0/1:99:44,55:44:1572:55:1976:-148.313,0,-111.97	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/1:120:52,68:52:1864:68:2424:-182.293,0,-131.916	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.203	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.541	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	0/1:56:22,34:22:792:34:1198:-91.2663,0,-54.748	0/0:77:74,3:74:2633:3:108:0,-13.1041,-227.141	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:21:7,14:7:252:14:500:-39.0145,0,-16.7073	0/1:61:27,34:27:951:34:1209:-90.7518,0,-67.5415	0/0:126:124,1:124:4384:1:36:0,-34.3903,-391.138	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:71:71,0:71:2543:0:0:0,-21.3731,-229.12	0/0:112:109,3:109:3884:3:108:0,-23.6402,-339.678	0/1:36:17,19:17:597:19:680:-50.6921,0,-43.219	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:56:55,1:55:1972:1:36:0,-13.2594,-174.157	0/1:75:20,55:20:720:55:1946:-152.835,0,-42.5515	0/1:40:7,33:7:252:33:1169:-93.4741,0,-10.9878	0/1:33:29,4:29:1022:4:144:-3.37963,0,-82.3569	0/1:56:24,32:24:841:32:1131:-85.2401,0,-59.1487	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:51:12,39:12:423:39:1392:-110.189,0,-23.0525	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:63:31,32:31:1080:32:1152:-85.0253,0,-78.5409	0/1:33:11,22:11:387:22:792:-61.6717,0,-25.2319	0/1:39:4,35:4:144:35:1256:-101.605,0,-1.57345	0/0:20:20,0:20:701:0:0:0,-6.0206,-63.4117	0/0:28:28,0:28:995:0:0:0,-8.42884,-89.864	0/1:122:45,77:45:1608:77:2751:-211.106,0,-108.284	0/0:95:95,0:95:3320:0:0:0,-28.5978,-299.02	0/0:50:50,0:50:1774:0:0:0,-15.0515,-159.942	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/1:146:58,88:58:2060:88:3168:-241.393,0,-141.721	0/1:27:9,18:9:324:18:644:-50.1628,0,-21.378	0/1:80:30,50:30:1071:50:1771:-135.59,0,-72.6192	0/1:74:25,49:25:891:49:1740:-134.608,0,-58.2326	0/1:43:12,31:12:423:31:1076:-84.2011,0,-25.4608	0/1:163:45,118:45:1586:118:4156:-325.158,0,-93.961	0/1:66:16,50:16:544:50:1769:-139.623,0,-29.4118	0/0:24:24,0:24:830:0:0:0,-7.22472,-75.0124	0/0:66:65,1:65:2312:1:36:0,-16.2697,-204.743
chr02	25632056	.	CGAC	TGAG,CGAG	459387	PASS	AB=0.490813,0.503789;ABP=10.0725,4.21156;AC=133,55;AF=0.707447,0.292553;AN=188;AO=12381,4865;CIGAR=1X2M1X,3M1X;DP=17325;DPB=17326.5;DPRA=0,1.00513;EPP=26888,10567.2;EPPR=5.18177;GTI=0;LEN=4,1;MEANALT=2.40426,2.79688;MQM=59.9683,59.8923;MQMR=60;NS=94;NUMALT=2;ODDS=9.17839;PAIRED=0,0;PAIREDR=0;PAO=3.5,2.5;PQA=118,82;PQR=0;PRO=0;QA=430606,171680;QR=25;RO=1;RPL=5610,2248;RPP=239.419,63.7852;RPPR=5.18177;RPR=6771,2617;RUN=1,1;SAF=5610,2248;SAP=239.419,63.7852;SAR=6771,2617;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:58:0,58,0:0:0:58,0:1992,0:-179.551,-17.4597,0,-179.551,-17.4597,-179.551	1/1:190:0,190,0:0:0:190,0:6599,0:-594.006,-57.1957,0,-594.006,-57.1957,-594.006	1/2:240:0,127,113:0:0:127,113:4394,4017:-684.764,-327.703,-289.472,-357.412,0,-323.395	1/2:428:0,243,182:0:0:243,182:8463,6407:-1209.46,-521.264,-448.114,-688.242,0,-633.454	1/2:60:0,45,15:0:0:45,15:1564,536:-171.204,-44.057,-30.5107,-127.502,0,-122.987	1/2:61:0,28,33:0:0:28,33:990,1176:-176.837,-96.2056,-87.7768,-80.9856,0,-71.0516	1/2:168:0,89,78:0:0:89,78:3142,2714:-476.603,-220.779,-193.988,-255.932,0,-232.452	1/2:260:0,96,162:0:0:96,162:3372,5719:-740.214,-465.763,-436.864,-274.55,0,-225.783	1/2:158:0,65,93:0:0:65,93:2259,3294:-452.335,-268.678,-249.111,-184.007,0,-156.011	1/2:188:0,87,99:0:0:87,99:3043,3543:-536.51,-288.951,-262.761,-247.587,0,-217.785	1/1:187:0,186,1:0:0:186,1:6443,36:-579.393,-55.9916,0,-576.456,-52.6943,-576.155	1/2:193:0,87,106:0:0:87,106:2979,3702:-543.267,-301.456,-275.266,-242.157,0,-210.247	1/2:196:0,107,88:0:0:107,88:3745,3103:-557.327,-252.634,-220.424,-304.685,0,-278.194	1/2:158:1,79,78:1:25:79,78:2712,2738:-440.872,-220.978,-199.144,-218.343,0,-196.811	1/2:158:0,64,94:0:0:64,94:2272,3329:-456.637,-271.514,-252.248,-185.478,0,-157.181	1/2:117:0,57,59:0:0:57,59:1992,2104:-333.519,-171.477,-154.318,-162.036,0,-144.275	1/1:118:0,118,0:0:0:118,0:4114,0:-370.451,-35.5215,0,-370.451,-35.5215,-370.451	1/1:124:0,124,0:0:0:124,0:4341,0:-390.871,-37.3277,0,-390.871,-37.3277,-390.871	1/1:94:0,93,0:0:0:93,0:3248,0:-292.222,-27.9958,0,-292.222,-27.9958,-292.222	1/2:237:0,138,96:0:0:138,96:4815,3367:-665.69,-274.063,-232.521,-391.697,0,-362.798	1/1:330:0,328,0:0:0:328,0:11258,0:-1012.88,-98.7378,0,-1012.88,-98.7378,-1012.88	1/1:112:0,110,0:0:0:110,0:3818,0:-343.454,-33.1133,0,-343.454,-33.1133,-343.454	1/2:140:0,63,76:0:0:63,76:2172,2666:-393.499,-217.065,-198.1,-176.558,0,-153.68	1/1:156:0,156,0:0:0:156,0:5485,0:-493.785,-46.9607,0,-493.785,-46.9607,-493.785	1/1:113:0,112,1:0:0:112,1:3910,21:-351.891,-33.7154,0,-350.303,-31.9164,-350.002	1/1:501:0,498,2:0:0:498,2:17287,72:-1555.15,-149.913,0,-1549.27,-144.078,-1548.67	1/1:477:0,472,3:0:0:472,3:16404,108:-1475.78,-142.086,0,-1466.96,-133.211,-1466.06	1/1:65:0,64,1:0:0:64,1:2241,36:-201.594,-19.2659,0,-198.656,-15.9687,-198.355	1/2:408:0,215,193:0:0:215,193:7467,6811:-1162,-554.969,-490.247,-607.377,0,-549.278	1/2:220:0,112,108:0:0:112,108:3883,3862:-630.733,-315.128,-281.412,-315.957,0,-283.446	1/2:211:0,104,104:0:0:104,104:3630,3670:-594.115,-298.865,-267.558,-295.274,0,-263.967	1/2:18:0,2,16:0:0:2,16:69,555:-51.065,-45.4596,-44.8575,-5.95048,0,-1.134	1/1:33:0,33,0:0:0:33,0:1137,0:-102.634,-9.93399,0,-102.634,-9.93399,-102.634	1/1:6:0,6,0:0:0:6,0:215,0:-19.6992,-1.80618,0,-19.6992,-1.80618,-19.6992	1/1:24:0,24,0:0:0:24,0:824,0:-74.4732,-7.22472,0,-74.4732,-7.22472,-74.4732	1/2:47:0,26,21:0:0:26,21:891,730:-132.028,-59.6978,-51.871,-72.6755,0,-66.3539	1/2:437:0,217,215:0:0:217,215:7598,7627:-1239.64,-621.437,-556.113,-618.244,0,-553.523	1/2:238:0,118,120:0:0:118,120:4152,4219:-681.744,-343.749,-308.227,-338.347,0,-302.223	1/2:134:0,66,68:0:0:66,68:2298,2398:-382.469,-195.607,-175.739,-187.213,0,-166.743	1/2:8:0,5,3:0:0:5,3:180,108:-23.8592,-9.17208,-7.66693,-15.0469,0,-14.1438	1/1:306:0,304,0:0:0:304,0:10526,0:-947.025,-91.5131,0,-947.025,-91.5131,-947.025	1/2:70:0,31,39:0:0:31,39:1090,1338:-197.702,-108.973,-99.6412,-89.0768,0,-77.3367	1/2:223:0,100,121:0:0:100,121:3444,4215:-622.458,-342.728,-312.625,-279.717,0,-243.292	1/2:171:0,81,90:0:0:81,90:2868,3194:-494.209,-260.587,-236.203,-233.977,0,-206.884	1/2:133:0,66,64:0:0:66,64:2190,2244:-359.776,-182.623,-162.755,-177.161,0,-157.895	1/1:176:0,176,0:0:0:176,0:6093,0:-548.479,-52.9813,0,-548.479,-52.9813,-548.479	1/2:237:0,131,105:0:0:131,105:4531,3694:-668.804,-300.619,-261.184,-368.303,0,-336.694	1/2:299:0,159,138:0:0:159,138:5529,4892:-848.051,-398.516,-350.652,-449.6,0,-408.058	1/2:170:0,74,94:0:0:74,94:2581,3314:-479.825,-269.91,-247.634,-209.997,0,-181.701	1/1:248:0,248,0:0:0:248,0:8645,0:-778.063,-74.6554,0,-778.063,-74.6554,-778.063	1/2:157:0,82,75:0:0:82,75:2833,2634:-444.909,-214.731,-190.046,-230.527,0,-207.949	1/2:31:0,16,15:0:0:16,15:563,518:-88.2642,-42.4301,-37.6136,-46.1825,0,-41.667	1/1:248:0,248,0:0:0:248,0:8686,0:-781.698,-74.6554,0,-781.698,-74.6554,-781.698	1/1:160:0,160,0:0:0:160,0:5510,0:-495.957,-48.1648,0,-495.957,-48.1648,-495.957	1/2:17:0,3,14:0:0:3,14: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chr02	25796955	.	G	T	51543.6	PASS	AB=0.499508;ABP=3.02312;AC=56;AF=0.297872;AN=188;AO=3058;CIGAR=1X;DP=10627;DPB=10627;DPRA=1.12437;EPP=6634.69;EPPR=16395.5;GTI=0;LEN=1;MEANALT=1.04762;MQM=59.9964;MQMR=60;NS=94;NUMALT=1;ODDS=11.115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=109333;QR=270135;RO=7565;RPL=1;RPP=6634.69;RPPR=16395.5;RPR=3057;RUN=1;SAF=0;SAP=6643.37;SAR=3058;SRF=0;SRP=16430.2;SRR=7565;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:45:45,0:45:1589:0:0:0,-13.5463,-143.298	0/0:263:263,0:263:9424:0:0:0,-79.1709,-848.117	0/1:128:63,65:63:2252:65:2324:-170.888,0,-164.411	0/1:142:67,75:67:2412:75:2696:-200.138,0,-174.59	0/1:74:36,38:36:1296:38:1364:-100.784,0,-94.6677	0/1:79:41,38:41:1455:38:1360:-98.9192,0,-107.464	0/1:154:70,84:70:2495:84:2987:-222.703,0,-178.444	0/1:186:110,76:110:3943:76:2714:-188.511,0,-299.069	0/1:92:57,35:57:2027:35:1260:-86.0107,0,-155.007	0/1:122:58,64:58:2071:64:2296:-170.175,0,-149.934	0/1:87:38,49:38:1360:49:1756:-132.117,0,-96.511	0/1:106:61,45:61:2188:45:1612:-113.461,0,-165.277	0/1:74:47,27:47:1688:27:968:-65.1611,0,-129.931	0/1:92:55,37:55:1941:37:1316:-91.047,0,-147.269	0/1:66:32,33:32:1152:33:1184:-86.9416,0,-84.0634	0/1:131:68,63:68:2413:63:2263:-164.497,0,-177.99	0/0:101:100,1:100:3576:1:36:0,-26.8058,-318.45	0/0:87:87,0:87:3089:0:0:0,-26.1896,-278.238	0/0:51:51,0:51:1805:0:0:0,-15.3525,-162.73	0/1:122:68,54:68:2425:54:1928:-137.071,0,-181.779	0/0:185:185,0:185:6611:0:0:0,-55.6905,-595.068	0/0:117:117,0:117:4189:0:0:0,-35.2205,-377.19	0/1:64:32,32:32:1130:32:1147:-84.2737,0,-82.741	0/0:133:133,0:133:4742:0:0:0,-40.037,-426.937	0/0:111:111,0:111:3968:0:0:0,-33.4143,-357.312	0/0:296:295,1:295:10533:1:36:0,-85.5066,-944.286	0/0:218:218,0:218:7794:0:0:0,-65.6245,-701.49	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/1:249:118,130:118:4236:130:4644:-343.106,0,-306.403	0/1:144:69,75:69:2476:75:2696:-199.535,0,-179.745	0/1:134:87,47:87:3116:47:1680:-111.149,0,-240.329	0/1:20:7,13:7:252:13:464:-36.0769,0,-17.0084	0/0:34:33,0:33:1171:0:0:0,-9.93399,-105.337	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/1:25:8,17:8:288:17:608:-47.5263,0,-18.7417	0/1:243:119,124:119:4233:124:4440:-326.621,0,-307.998	0/1:245:146,99:146:5214:99:3544:-245.416,0,-395.646	0/1:94:48,46:48:1716:46:1644:-119.952,0,-126.429	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:145:145,0:145:5197:0:0:0,-43.6493,-467.866	0/1:50:25,25:25:896:25:896:-65.9089,0,-65.9089	0/1:160:79,81:79:2817:81:2891:-212.261,0,-205.603	0/1:88:49,39:49:1737:39:1385:-98.4562,0,-130.122	0/1:65:36,29:36:1287:29:1040:-74.3474,0,-96.5658	0/0:101:101,0:101:3605:0:0:0,-30.404,-324.655	0/1:97:55,41:55:1968:41:1472:-103.517,0,-148.136	0/1:177:94,83:94:3351:83:2968:-214.071,0,-248.525	0/1:150:78,72:78:2764:72:2583:-187.564,0,-203.846	0/0:123:123,0:123:4394:0:0:0,-37.0267,-395.633	0/1:141:58,83:58:2076:83:2972:-225.268,0,-144.665	0/1:19:11,8:11:396:8:288:-20.5478,0,-30.2632	0/0:237:237,0:237:8445:0:0:0,-71.3441,-760.054	0/0:90:90,0:90:3162:0:0:0,-27.0927,-284.805	0/1:57:22,35:22:788:35:1256:-96.1866,0,-54.0861	0/1:100:50,50:50:1781:50:1764:-128.94,0,-130.468	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.102	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/1:27:10,17:10:360:17:604:-46.5628,0,-24.6165	0/1:81:35,46:35:1256:46:1648:-124.225,0,-88.9619	0/0:179:178,1:178:6347:1:36:0,-50.2861,-567.723	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:177:177,0:177:6316:0:0:0,-53.2823,-568.532	0/0:309:307,2:307:10990:2:72:0,-86.1815,-982.157	0/1:134:40,94:40:1428:94:3353:-261.648,0,-88.4795	0/0:81:81,0:81:2870:0:0:0,-24.3834,-258.538	0/0:174:170,4:170:6080:4:144:0,-39.0656,-533.989	0/1:254:97,157:97:3472:157:5581:-425.955,0,-236.23	0/1:32:17,15:17:608:15:540:-39.3036,0,-45.4191	0/1:104:52,52:52:1855:52:1853:-135.741,0,-135.922	0/1:110:61,49:61:2179:49:1755:-125.121,0,-163.262	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/0:149:149,0:149:5324:0:0:0,-44.8535,-479.295	0/1:38:15,23:15:540:23:824:-63.0442,0,-37.4974	0/0:243:243,0:243:8689:0:0:0,-73.1503,-781.999	0/0:111:111,0:111:3939:0:0:0,-33.4143,-354.702	0/1:155:75,80:75:2672:80:2860:-210.978,0,-194.067	0/1:121:56,65:56:1975:65:2315:-172.186,0,-141.597	0/1:8:3,5:3:108:5:176:-13.7768,0,-7.66693	0/0:71:71,0:71:2537:0:0:0,-21.3731,-228.579	0/0:104:104,0:104:3699:0:0:0,-31.3071,-333.111	0/1:216:104,112:104:3723:112:3997:-294.897,0,-270.248	0/0:142:140,2:140:5020:2:72:0,-35.9095,-445.109	0/0:70:70,0:70:2503:0:0:0,-21.0721,-225.522	0/1:78:40,38:40:1436:38:1362:-99.4001,0,-106.057	0/1:181:90,91:90:3214:91:3266:-239.673,0,-234.995	0/1:45:22,23:22:780:23:820:-60.5762,0,-56.9767	0/1:103:49,54:49:1751:54:1917:-141.801,0,-126.867	0/1:98:52,46:52:1855:46:1644:-118.748,0,-137.728	0/1:69:42,27:42:1504:27:968:-66.6663,0,-114.884	0/1:200:106,94:106:3796:94:3368:-243.13,0,-281.632	0/1:60:20,40:20:716:40:1424:-110.396,0,-46.7059	0/0:93:92,1:92:3267:1:36:0,-24.3975,-290.651	0/0:108:108,0:108:3860:0:0:0,-32.5112,-347.596
chr02	25933998	.	C	T	237868	PASS	AB=0.500895;ABP=3.15808;AC=56;AF=0.297872;AN=188;AO=10655;CIGAR=1X;DP=35647;DPB=35647;DPRA=1.69631;EPP=23131.4;EPPR=54233.4;GTI=0;LEN=1;MEANALT=1.08333;MQM=59.9946;MQMR=59.9947;NS=94;NUMALT=1;ODDS=10.0593;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=379287;QR=884775;RO=24982;RPL=3435;RPP=2922.67;RPPR=4414.4;RPR=7220;RUN=1;SAF=3434;SAP=2925.76;SAR=7221;SRF=8931;SRP=4409.44;SRR=16051;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:130:130,0:130:4581:0:0:0,-39.1339,-412.269	0/0:446:446,0:446:15723:0:0:0,-134.259,-1414.78	0/1:393:203,190:203:7180:190:6770:-491.07,0,-527.958	0/1:534:283,251:283:10025:251:8994:-648.687,0,-741.442	0/1:206:114,92:114:4039:92:3256:-231.249,0,-301.687	0/1:183:93,90:93:3312:90:3219:-234.843,0,-243.209	0/1:381:207,174:207:7311:174:6195:-442.957,0,-543.353	0/1:363:184,179:184:6545:179:6325:-460.072,0,-479.859	0/1:248:132,116:132:4652:116:4136:-297.756,0,-344.19	0/1:266:158,108:158:5612:108:3847:-266.353,0,-425.131	0/1:401:209,192:209:7425:192:6795:-490.916,0,-547.586	0/1:120:69,51:69:2421:51:1807:-126.787,0,-182.02	0/1:102:43,59:43:1527:59:2112:-159.644,0,-107.017	0/1:105:56,49:56:1990:49:1748:-125.996,0,-147.678	0/1:109:56,53:56:1995:53:1884:-137.026,0,-147.011	0/1:116:60,56:60:2113:56:2004:-145.714,0,-155.518	0/0:150:150,0:150:5328:0:0:0,-45.1545,-479.656	0/0:116:116,0:116:4103:0:0:0,-34.9195,-369.457	0/0:237:237,0:237:8400:0:0:0,-71.3441,-756.011	0/1:440:218,222:218:7748:222:7911:-579.565,0,-564.904	0/0:270:270,0:270:9544:0:0:0,-81.2781,-858.927	0/0:185:185,0:185:6555:0:0:0,-55.6905,-590.035	0/1:194:114,80:114:4008:80:2872:-200.317,0,-302.509	0/0:276:275,1:275:9779:1:34:0,-79.6854,-876.659	0/0:211:211,0:211:7440:0:0:0,-63.5173,-669.65	0/0:803:802,1:802:28318:1:36:0,-238.129,-2544.21	0/0:623:620,2:620:21901:2:72:0,-180.664,-1963.77	0/0:66:66,0:66:2304:0:0:0,-19.868,-207.618	0/1:637:337,300:337:11872:300:10726:-773.49,0,-876.597	0/1:418:210,208:210:7411:208:7405:-540.67,0,-541.212	0/1:528:242,286:242:8578:286:10216:-760.424,0,-613.079	0/1:990:553,437:553:19676:437:15525:-1098.94,0,-1472.36	0/0:759:756,3:756:26894:3:108:0,-218.407,-2409.63	0/0:830:828,2:828:29303:2:68:0,-243.397,-2629.98	0/0:1649:1647,2:1647:58628:2:72:0,-489.562,-5267.62	0/1:1257:621,635:621:22113:635:22609:-1655.78,0,-1611.16	0/1:291:147,144:147:5215:144:5130:-374.242,0,-381.891	0/1:369:165,204:165:5851:204:7244:-540.934,0,-415.625	0/1:488:229,259:229:8135:259:9274:-687.723,0,-585.269	0/0:744:743,1:743:26357:1:36:0,-220.368,-2367.8	0/0:449:447,2:447:15797:2:72:0,-128.326,-1414.6	0/1:220:98,122:98:3456:122:4332:-323.83,0,-245.028	0/1:352:175,177:175:6199:177:6299:-461.042,0,-452.047	0/1:94:60,34:60:2128:34:1207:-80.6385,0,-163.489	0/1:99:41,58:41:1440:58:2048:-154.789,0,-100.091	0/0:262:261,1:261:9230:1:36:0,-75.2716,-827.082	0/1:270:137,133:137:4848:133:4733:-344.424,0,-355.197	0/1:459:214,245:214:7576:245:8730:-647.52,0,-543.71	0/1:248:100,148:100:3548:148:5253:-398.252,0,-244.873	0/0:230:230,0:230:8157:0:0:0,-69.2369,-734.148	0/1:390:215,175:215:7595:175:6235:-443.844,0,-566.19	0/1:1137:582,555:582:20580:555:19783:-1437.73,0,-1509.45	0/0:395:392,3:392:13931:3:108:0,-108.832,-1243.49	0/0:153:152,1:152:5381:1:36:0,-42.4593,-480.826	0/1:1147:596,551:596:21161:551:19566:-1415.21,0,-1558.68	0/1:394:204,190:204:7250:190:6738:-487.893,0,-533.95	0/0:141:140,1:140:4934:1:36:0,-38.847,-440.614	0/1:880:396,484:396:14040:484:17233:-1285.7,0,-998.475	0/1:994:513,480:513:18203:480:17052:-1235.03,0,-1338.58	0/1:152:79,73:79:2780:73:2572:-185.971,0,-204.682	0/0:176:175,1:175:6170:1:36:0,-49.383,-551.808	0/0:733:733,0:733:25982:0:0:0,-220.655,-2337.54	0/0:168:167,0:167:5876:0:0:0,-50.272,-528.745	0/0:402:401,1:401:14213:1:36:0,-117.416,-1275.34	0/1:128:41,87:41:1460:87:3116:-242.135,0,-93.1642	0/0:270:270,0:270:9525:0:0:0,-81.2781,-857.216	0/0:472:468,4:468:16599:4:140:0,-129.142,-1480.64	0/1:216:72,144:72:2552:144:5143:-397.99,0,-164.909	0/1:345:194,151:194:6886:151:5377:-380.208,0,-515.957	0/1:199:93,106:93:3272:106:3784:-280.852,0,-234.794	0/1:136:62,74:62:2181:74:2625:-195.556,0,-155.615	0/0:854:852,1:852:30274:1:36:0,-253.54,-2720.16	0/0:220:220,0:220:7786:0:0:0,-66.2266,-700.776	0/1:162:63,99:63:2217:99:3525:-268.692,0,-151.024	0/0:664:663,0:663:23315:0:0:0,-199.583,-2097.4	0/0:366:366,0:366:12926:0:0:0,-110.177,-1163.17	0/1:359:177,181:177:6286:181:6438:-471.38,0,-457.707	0/1:271:138,133:138:4878:133:4735:-344.732,0,-357.596	0/1:828:337,490:337:11960:490:17449:-1320.73,0,-826.952	0/0:287:286,0:286:10086:0:0:0,-86.0946,-907.325	0/0:256:255,0:255:9004:0:0:0,-76.7626,-809.987	0/1:589:291,298:291:10209:298:10655:-781.552,0,-741.446	0/0:181:181,0:181:6377:0:0:0,-54.4864,-574.028	0/0:105:105,0:105:3733:0:0:0,-31.6081,-336.171	0/1:162:89,73:89:3113:73:2595:-185.03,0,-231.631	0/1:208:103,105:103:3639:105:3739:-274.098,0,-265.101	0/1:70:28,42:28:985:42:1499:-114.132,0,-67.8894	0/1:112:58,54:58:2050:54:1907:-138.192,0,-151.055	0/1:136:71,65:71:2531:65:2312:-167.401,0,-187.101	0/1:446:224,222:224:7966:222:7897:-576.499,0,-582.696	0/1:762:391,371:391:13862:371:13207:-959.052,0,-1017.99	0/1:114:41,73:41:1447:73:2537:-194.26,0,-96.2077	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:142:142,0:142:4985:0:0:0,-42.7463,-448.802
chr02	26001038	.	T	A	330760	PASS	AB=0.507761;ABP=9.65065;AC=132;AF=0.702128;AN=188;AO=13469;CIGAR=1X;DP=19728;DPB=19728;DPRA=0;EPP=8563.85;EPPR=4659.23;GTI=0;LEN=1;MEANALT=1.05319;MQM=46.2633;MQMR=59.9591;NS=94;NUMALT=1;ODDS=18.142;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=482329;QR=223582;RO=6254;RPL=84;RPP=28525.5;RPPR=13272.5;RPR=13385;RUN=1;SAF=10462;SAP=8963.14;SAR=3007;SRF=4994;SRP=4844.12;SRR=1260;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:34:0,34:0:0:34:1216:-108.131,-10.235,0	1/1:192:1,191:1:36:191:6853:-604.657,-54.1995,0	0/1:99:56,43:56:1986:43:1544:-107.157,0,-149.211	0/1:360:192,168:192:6818:168:6006:-419.313,0,-505.316	0/1:95:42,53:42:1495:53:1900:-140.443,0,-106.246	0/1:60:21,39:21:752:39:1404:-105.194,0,-49.9445	0/1:272:125,147:125:4476:147:5276:-385.259,0,-321.101	0/1:170:83,87:83:2963:87:3100:-224.685,0,-215.728	0/1:127:69,58:69:2461:58:2072:-145.631,0,-183.512	0/1:219:104,115:104:3724:115:4116:-296.451,0,-269.432	0/1:402:174,227:174:6218:227:8148:-603.47,0,-438.645	0/1:80:36,44:36:1283:44:1580:-114.388,0,-91.6902	0/1:63:31,32:31:1116:32:1148:-82.7739,0,-81.7868	0/1:96:40,56:40:1436:56:2000:-149.913,0,-100.639	0/1:124:53,71:53:1900:71:2542:-187.813,0,-133.95	0/1:60:28,32:28:1008:32:1152:-84.7941,0,-72.9746	1/1:52:0,52:0:0:52:1864:-164.906,-15.6536,0	1/1:62:0,62:0:0:62:2214:-195.703,-18.6639,0	1/1:237:0,237:0:0:237:8511:-752.508,-71.3441,0	0/1:353:202,151:202:7204:151:5412:-372.192,0,-542.153	1/1:83:0,83:0:0:83:2965:-264.926,-24.9855,0	1/1:130:0,130:0:0:130:4644:-409.217,-39.1339,0	0/1:98:49,49:49:1739:49:1756:-124.851,0,-127.293	1/1:61:0,61:0:0:61:2184:-195.051,-18.3628,0	1/1:75:0,75:0:0:75:2692:-240.209,-22.5773,0	1/1:501:2,499:2:72:499:17795:-1565.22,-143.979,0	1/1:163:0,163:0:0:163:5864:-523.023,-49.0679,0	1/1:42:0,42:0:0:42:1512:-135.061,-12.6433,0	0/1:439:245,194:245:8763:194:6926:-476.623,0,-656.479	0/1:98:43,55:43:1531:55:1976:-147.221,0,-108.581	0/1:218:119,99:119:4244:99:3548:-247.337,0,-316.004	0/1:452:248,204:248:8899:204:7305:-514.267,0,-664.824	1/1:497:0,497:0:0:497:17803:-1580.18,-149.612,0	1/1:114:0,114:0:0:114:4062:-356.655,-34.3174,0	1/1:542:0,542:0:0:542:19398:-1716.12,-163.158,0	0/1:512:238,274:238:8514:274:9848:-716.288,0,-612.132	0/1:347:152,195:152:5376:195:6983:-509.99,0,-379.52	0/1:99:50,49:50:1796:49:1764:-127.802,0,-132.12	0/1:383:202,181:202:7236:181:6496:-459.482,0,-535.96	1/1:110:0,110:0:0:110:3933:-349.121,-33.1133,0	1/1:94:1,93:1:36:93:3329:-292.865,-24.6985,0	0/1:188:102,86:102:3641:86:3092:-218.673,0,-271.3	0/1:129:60,69:60:2148:69:2464:-179.271,0,-154.755	0/1:121:51,70:51:1815:70:2508:-185.292,0,-127.205	0/1:125:70,55:70:2500:55:1968:-136.85,0,-187.579	1/1:116:0,116:0:0:116:4152:-363.612,-34.9195,0	0/1:107:43,64:43:1540:64:2300:-171.729,0,-106.683	0/1:285:154,131:154:5503:131:4688:-328.674,0,-409.603	0/1:142:46,96:46:1635:96:3444:-262.503,0,-104.673	1/1:279:0,279:0:0:279:9996:-881.606,-83.9874,0	0/1:328:154,174:154:5503:174:6216:-452.083,0,-396.659	0/1:565:333,232:333:11917:232:8314:-570.362,0,-902.303	1/1:120:0,120:0:0:120:4307:-381.285,-36.1236,0	1/1:88:0,88:0:0:88:3152:-279.133,-26.4906,0	0/1:465:223,242:223:7998:242:8678:-628.355,0,-579.859	0/1:84:50,34:50:1784:34:1224:-84.3139,0,-135.556	1/1:84:2,82:2:68:82:2935:-251.927,-18.8288,0	0/1:354:171,183:171:6118:183:6550:-480.203,0,-444.155	0/1:664:265,399:265:9503:399:14318:-1080.43,0,-655.341	0/1:86:46,40:46:1648:40:1440:-102.657,0,-122.72	1/1:206:1,205:1:36:205:7352:-644.185,-58.4139,0	1/1:308:0,308:0:0:308:11032:-983.585,-92.7172,0	1/1:183:0,183:0:0:183:6503:-572.397,-55.0885,0	1/1:243:1,242:1:32:242:8680:-764.881,-69.951,0	0/1:73:37,36:37:1332:36:1280:-92.7473,0,-98.2072	1/1:113:0,113:0:0:113:4048:-357.579,-34.0164,0	1/1:250:2,248:2:72:248:8864:-772.246,-68.4208,0	0/1:147:85,62:85:3039:62:2210:-152.389,0,-229.488	0/1:294:149,145:149:5352:145:5196:-373.246,0,-393.308	0/1:86:44,42:44:1575:42:1496:-104.432,0,-116.152	0/1:208:95,112:95:3408:112:4007:-290.921,0,-244.277	1/1:649:0,649:0:0:649:23211:-2070.99,-195.368,0	1/1:82:0,82:0:0:82:2930:-258.129,-24.6845,0	0/1:71:34,37:34:1216:37:1320:-96.1856,0,-88.3734	1/1:161:0,161:0:0:161:5728:-508.516,-48.4658,0	1/1:290:0,290:0:0:290:10377:-917.399,-87.2987,0	0/1:84:42,42:42:1500:42:1504:-107.972,0,-110.008	0/1:125:66,59:66:2364:59:2107:-148.758,0,-175.39	0/1:522:251,269:251:8986:269:9644:-691.755,0,-651.825	1/1:124:0,123:0:0:123:4412:-393.342,-37.0267,0	1/1:98:1,97:1:36:97:3482:-304.799,-25.9027,0	0/1:396:214,182:214:7621:182:6500:-454.481,0,-565.703	1/1:200:0,200:0:0:200:7172:-633.062,-60.206,0	1/1:142:0,142:0:0:142:5080:-445.989,-42.7463,0	0/1:179:84,95:84:3000:95:3400:-245.932,0,-216.302	0/1:277:129,148:129:4591:148:5303:-383.689,0,-329.952	0/1:33:18,15:18:648:15:536:-38.0013,0,-48.7179	0/1:39:14,25:14:504:25:900:-68.6846,0,-33.9579	0/1:50:22,28:22:792:28:1004:-73.9668,0,-56.5542	0/1:405:170,235:170:6099:235:8444:-627.555,0,-427.092	0/1:686:328,358:328:11728:358:12840:-929.726,0,-848.852	0/1:147:91,56:91:3248:56:2000:-131.185,0,-248.291	1/1:66:0,66:0:0:66:2360:-206.885,-19.868,0	1/1:246:0,246:0:0:246:8820:-776.372,-74.0534,0
chr02	26001050	.	TACTA	AACTG	403325	PASS	AB=0.507373;ABP=10.1193;AC=132;AF=0.702128;AN=188;AO=16248;CIGAR=1X3M1X;DP=23730;DPB=23760;DPRA=0;EPP=35285.1;EPPR=15959;GTI=0;LEN=5;MEANALT=2.25532;MQM=45.4481;MQMR=59.9118;NS=94;NUMALT=1;ODDS=39.1348;PAIRED=0;PAIREDR=0;PAO=4;PQA=140;PQR=0;PRO=0;QA=569885;QR=257108;RO=7348;RPL=10405;RPP=2784.42;RPPR=2106.58;RPR=5843;RUN=1;SAF=10405;SAP=2784.42;SAR=5843;SRF=5008;SRP=2106.58;SRR=2340;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:98:0,97:0:0:97:3397:-294.5,-29.1999,0	1/1:312:1,308:1:36:308:10781:-946.875,-89.7675,0	0/1:222:113,108:113:3931:108:3829:-269.032,0,-287.108	0/1:368:194,174:194:6746:174:6076:-422.823,0,-496.449	0/1:196:87,109:87:3032:109:3835:-280.455,0,-214.107	0/1:134:65,68:65:2244:68:2413:-170.114,0,-161.824	0/1:282:133,148:133:4613:148:5195:-376.364,0,-330.448	0/1:323:145,178:145:5057:178:6204:-449.914,0,-358.025	0/1:213:117,96:117:4047:96:3312:-227.86,0,-300.294	0/1:232:112,120:112:3914:120:4126:-294.369,0,-282.619	0/1:403:175,226:175:6150:226:7925:-585.467,0,-432.574	0/1:160:68,91:68:2389:91:3164:-229.264,0,-166.646	0/1:147:69,78:69:2429:78:2741:-195.618,0,-174.503	0/1:171:73,98:73:2578:98:3430:-253.552,0,-180.797	0/1:126:54,70:54:1903:70:2456:-180.307,0,-133.872	0/1:127:57,69:57:1988:69:2422:-176.463,0,-140.914	1/1:161:0,160:0:0:160:5628:-492.586,-48.1648,0	1/1:121:0,121:0:0:121:4226:-369.12,-36.4246,0	1/1:272:0,271:0:0:271:9484:-839.864,-81.5791,0	0/1:358:206,151:206:7220:151:5334:-365.031,0,-542.164	1/1:178:0,178:0:0:178:6218:-551.237,-53.5833,0	1/1:135:0,135:0:0:135:4713:-415.332,-40.6391,0	0/1:100:52,48:52:1788:48:1692:-118.821,0,-131.095	1/1:187:0,187:0:0:187:6589:-582.312,-56.2926,0	1/1:119:0,118:0:0:118:4152:-368.842,-35.5215,0	1/1:503:1,500:1:27:500:17472:-1541.97,-148.405,0	1/1:324:0,319:0:0:319:11238:-995.707,-96.0286,0	1/1:71:0,70:0:0:70:2458:-217.917,-21.0721,0	0/1:447:250,196:250:8634:196:6921:-474.867,0,-642.464	0/1:167:83,84:83:2913:84:2945:-211.024,0,-212.134	0/1:219:119,100:119:4086:100:3507:-243.83,0,-301.906	0/1:451:245,205:245:8641:205:7231:-508.671,0,-641.878	1/1:500:0,495:0:0:495:17437:-1550.82,-149.01,0	1/1:115:0,112:0:0:112:3922:-346.112,-33.7154,0	1/1:546:0,543:0:0:543:18860:-1671.81,-163.459,0	0/1:522:238,277:238:8318:277:9715:-705.637,0,-593.283	0/1:357:157,200:157:5516:200:7038:-513.098,0,-389.111	0/1:186:93,93:93:3251:93:3245:-231.747,0,-235.866	0/1:451:234,216:234:8196:216:7613:-536.752,0,-601.92	1/1:113:0,111:0:0:111:3910:-347.359,-33.4143,0	1/1:204:1,201:1:35:201:7066:-621.736,-57.6318,0	0/1:216:117,96:117:4107:96:3359:-234.82,0,-305.35	0/1:244:113,130:113:3912:130:4503:-323.751,0,-278.853	0/1:122:51,71:51:1775:71:2510:-185.377,0,-123.306	0/1:130:70,60:70:2431:60:2102:-147.334,0,-179.914	1/1:118:0,118:0:0:118:4146:-363.829,-35.5215,0	0/1:187:79,107:79:2796:107:3772:-276.194,0,-195.548	0/1:291:156,133:156:5459:133:4662:-325.607,0,-404.197	0/1:148:46,101:46:1612:101:3495:-265.409,0,-100.757	1/1:286:0,285:0:0:285:10048:-887.277,-85.7936,0	0/1:334:155,179:155:5394:179:6290:-457.271,0,-385.065	0/1:570:335,229:335:11816:229:8024:-545.639,0,-893.215	1/1:208:0,208:0:0:208:7289:-640.222,-62.6142,0	1/1:87:0,87:0:0:87:3040:-269.819,-26.1896,0	0/1:472:223,247:223:7823:247:8573:-618.626,0,-562.275	0/1:157:89,68:89:3125:68:2403:-166.34,0,-234.218	1/1:85:2,83:2:72:83:2889:-248.33,-18.7508,0	0/1:353:169,181:169:5919:181:6370:-464.65,0,-427.113	0/1:663:265,393:265:9235:393:13848:-1041.71,0,-632.75	0/1:159:71,88:71:2484:88:3101:-227.138,0,-175.95	1/1:207:1,204:1:34:204:7185:-631.118,-58.6504,0	1/1:309:0,308:0:0:308:10796:-964.001,-92.7172,0	1/1:188:0,188:0:0:188:6621:-583.602,-56.5936,0	1/1:248:1,245:1:35:245:8604:-759.412,-70.8995,0	0/1:115:62,52:62:2158:52:1837:-129.172,0,-159.82	1/1:115:0,115:0:0:115:4006:-354.867,-34.6185,0	1/1:256:1,254:1:36:254:8852:-777.133,-73.4803,0	0/1:149:84,62:84:2949:62:2193:-151.256,0,-221.353	0/1:317:158,154:158:5571:154:5401:-385.536,0,-407.279	0/1:137:66,70:66:2317:70:2431:-169.746,0,-167.527	0/1:208:93,113:93:3268:113:3987:-289.824,0,-231.916	1/1:657:0,652:0:0:652:22819:-2036.62,-196.272,0	1/1:138:0,137:0:0:137:4807:-421.455,-41.2411,0	0/1:144:78,64:78:2723:64:2268:-157.378,0,-202.223	1/1:318:0,312:0:0:312:10902:-964.761,-93.9214,0	1/1:294:0,293:0:0:293:10336:-914.806,-88.2018,0	0/1:268:133,135:133:4682:135:4742:-333.011,0,-340.844	0/1:249:124,125:124:4354:125:4365:-306.816,0,-317.084	0/1:529:255,267:255:8982:267:9327:-669.41,0,-650.952	1/1:285:0,284:0:0:284:10068:-890.363,-85.4925,0	1/1:246:2,244:2:72:244:8591:-747.671,-67.2167,0	0/1:404:215,189:215:7465:189:6634:-464.881,0,-549.363	1/1:204:0,201:0:0:201:7103:-627.421,-60.507,0	1/1:146:0,146:0:0:146:5148:-452.227,-43.9504,0	0/1:184:85,99:85:2966:99:3426:-247.741,0,-211.753	0/1:281:133,148:133:4627:148:5184:-373.233,0,-331.974	0/1:81:44,37:44:1565:37:1304:-89.9482,0,-116.756	0/1:102:30,70:30:1056:70:2462:-186.014,0,-64.9568	0/1:109:54,55:54:1889:55:1873:-132.793,0,-137.369	0/1:451:188,260:188:6640:260:9181:-678.665,0,-462.51	0/1:768:366,395:366:12861:395:13834:-997.37,0,-927.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chr02	26089026	.	G	T	24687.5	PASS	AB=0.32761;ABP=1656.84;AC=56;AF=0.297872;AN=188;AO=2105;CIGAR=1X;DP=12415;DPB=12415;DPRA=0.917182;EPP=4573.96;EPPR=22362.7;GTI=9;LEN=1;MEANALT=1.08197;MQM=39.8774;MQMR=45.8562;NS=94;NUMALT=1;ODDS=3.47125;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75265;QR=364145;RO=10305;RPL=2088;RPP=4427.49;RPPR=195.998;RPR=17;RUN=1;SAF=2088;SAP=4427.49;SAR=17;SRF=4676;SRP=194.388;SRR=5629;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:86:86,0:86:3002:0:0:0,-25.8886,-245.208	0/0:221:221,0:221:7834:0:0:0,-66.5276,-664.514	0/1:145:106,39:106:3750:39:1396:-69.7631,0,-262.781	0/1:111:98,13:98:3429:13:464:-5.27944,0,-253.399	0/1:59:36,23:36:1276:23:824:-53.6838,0,-89.7479	0/1:91:54,37:54:1927:37:1324:-84.0914,0,-124.382	0/1:85:71,14:71:2522:14:504:-16.5351,0,-185.499	0/1:225:131,94:131:4584:94:3365:-215.257,0,-314.379	0/1:159:116,43:116:4104:43:1548:-80.5053,0,-297.015	0/1:164:103,61:103:3625:61:2192:-142.478,0,-267.708	0/1:91:59,32:59:2058:32:1152:-72.2346,0,-149.925	0/1:125:87,37:87:3051:37:1315:-72.8625,0,-215.457	0/1:133:80,53:80:2880:53:1900:-117.881,0,-200.68	0/1:112:68,44:68:2416:44:1558:-99.0611,0,-172.923	0/1:123:83,40:83:2963:40:1432:-88.411,0,-219.467	0/1:112:78,34:78:2757:34:1220:-70.8044,0,-197.227	0/0:119:119,0:119:4247:0:0:0,-35.8226,-356.265	0/0:101:101,0:101:3598:0:0:0,-30.404,-304.981	0/0:73:73,0:73:2600:0:0:0,-21.9752,-212.399	0/1:142:100,42:100:3530:42:1508:-89.7592,0,-255.664	0/0:258:257,1:257:9016:1:36:0,-75.0171,-752.252	0/0:105:105,0:105:3708:0:0:0,-31.6081,-320.778	0/1:101:73,28:73:2573:28:1000:-55.9662,0,-186.581	0/0:116:116,0:116:4111:0:0:0,-34.9195,-356.114	0/0:169:169,0:169:5984:0:0:0,-50.8741,-481.847	0/0:532:530,1:530:18705:1:36:0,-156.609,-1637.51	0/0:293:293,0:293:10318:0:0:0,-88.2018,-838.209	0/0:92:92,0:92:3253:0:0:0,-27.6948,-279.639	0/1:172:139,33:139:4846:33:1188:-51.9281,0,-365.993	0/1:103:86,17:86:3035:17:612:-22.1325,0,-219.263	0/1:123:96,27:96:3374:27:968:-47.6797,0,-253.962	0/1:5:3,2:3:108:2:72:-5.05838,0,-7.80347	0/0:31:31,0:31:1089:0:0:0,-9.33193,-91.8408	0/0:8:8,0:8:288:0:0:0,-2.40824,-24.7789	0/0:15:15,0:15:527:0:0:0,-4.51545,-41.7187	0/1:13:10,3:10:344:3:95:-4.63333,0,-24.8015	0/1:372:260,111:260:9172:111:3975:-236.706,0,-685.004	0/1:173:103,70:103:3671:70:2494:-161.067,0,-266.426	0/1:113:83,30:83:2909:30:1056:-55.8663,0,-208.556	0/0:4:4,0:4:144:0:0:0,-1.20412,-12.8107	0/0:213:213,0:213:7482:0:0:0,-64.1194,-600.323	0/1:48:35,13:35:1213:13:453:-24.7162,0,-89.2588	0/1:186:114,72:114:4023:72:2574:-165.151,0,-285.026	0/1:149:86,63:86:3036:63:2255:-152.065,0,-216.421	0/1:115:82,33:82:2868:33:1180:-67.1009,0,-210.387	0/0:163:163,0:163:5749:0:0:0,-49.0679,-491.216	0/1:218:151,67:151:5361:67:2397:-135.897,0,-377.866	0/1:130:94,36:94:3329:36:1292:-74.2783,0,-244.58	0/1:103:62,41:62:2182:41:1442:-95.6451,0,-153.557	0/0:170:170,0:170:5998:0:0:0,-51.1751,-518.386	0/1:65:42,23:42:1504:23:824:-53.6128,0,-112.301	0/1:10:4,6:4:140:6:216:-16.2104,0,-8.96994	0/0:198:198,0:198:6967:0:0:0,-59.6039,-582.762	0/0:64:64,0:64:2210:0:0:0,-19.2659,-189.913	0/1:15:6,9:6:216:9:324:-23.2629,0,-14.2782	0/1:106:86,20:86:3000:20:712:-30.0107,0,-219.896	0/0:82:81,1:81:2861:1:36:0,-21.1818,-233.697	0/1:15:9,6:9:307:6:212:-14.6008,0,-22.8622	0/1:15:10,5:10:347:5:180:-10.4215,0,-25.754	0/1:115:85,30:85:3031:30:1076:-58.221,0,-220.398	0/0:221:221,0:221:7873:0:0:0,-66.5276,-675.726	0/0:8:8,0:8:275:0:0:0,-2.40824,-24.0855	0/0:282:282,0:282:10016:0:0:0,-84.8905,-876.167	0/0:251:251,0:251:8900:0:0:0,-75.5585,-755.562	0/1:82:47,35:47:1663:35:1260:-83.588,0,-116.471	0/0:103:103,0:103:3658:0:0:0,-31.0061,-308.764	0/0:256:254,2:254:8979:2:72:0,-70.4085,-760.831	0/1:85:54,30:54:1936:30:1057:-66.9312,0,-135.358	0/1:48:33,15:33:1171:15:540:-32.5316,0,-84.3084	0/1:88:46,42:46:1607:42:1512:-101.719,0,-108.923	0/1:118:69,49:69:2454:49:1756:-119.989,0,-183.387	0/0:49:49,0:49:1710:0:0:0,-14.7505,-143.831	0/0:156:156,0:156:5481:0:0:0,-46.9607,-437.511	0/1:88:65,23:65:2278:23:813:-42.7192,0,-158.546	0/0:299:299,0:299:10589:0:0:0,-90.008,-891.645	0/0:190:190,0:190:6753:0:0:0,-57.1957,-578.968	0/1:160:112,48:112:3974:48:1671:-94.2092,0,-287.324	0/1:126:83,43:83:2948:43:1544:-92.2567,0,-213.657	0/1:15:13,2:13:455:2:72:-1.92099,0,-33.9183	0/0:185:185,0:185:6508:0:0:0,-55.6905,-534.657	0/0:163:163,0:163:5781:0:0:0,-49.0679,-472.503	0/1:215:148,67:148:5200:67:2408:-145.292,0,-383.587	0/0:216:216,0:216:7671:0:0:0,-65.0225,-667.571	0/0:140:140,0:140:4939:0:0:0,-42.1442,-423.596	0/1:167:101,66:101:3590:66:2360:-154.85,0,-265.935	0/1:261:163,98:163:5801:98:3519:-229.176,0,-425.636	0/1:72:46,26:46:1626:26:932:-57.0882,0,-118.31	0/1:118:80,38:80:2868:38:1359:-78.208,0,-202.126	0/1:108:70,38:70:2476:38:1364:-82.3618,0,-179.31	0/1:58:40,18:40:1405:18:648:-38.1374,0,-101.328	0/1:140:94,46:94:3350:46:1652:-98.2392,0,-239.649	0/1:116:52,64:52:1837:64:2283:-162.521,0,-122.764	0/0:102:102,0:102:3552:0:0:0,-30.7051,-299.489	0/0:274:272,1:272:9669:1:36:0,-79.8449,-827.71
chr02	26089042	.	A	C	22964.8	PASS	AB=0.323749;ABP=1739.05;AC=56;AF=0.297872;AN=188;AO=2087;CIGAR=1X;DP=12471;DPB=12471;DPRA=0.837737;EPP=4534.87;EPPR=22542.9;GTI=9;LEN=1;MEANALT=1.01695;MQM=39.8874;MQMR=45.6723;NS=94;NUMALT=1;ODDS=0.964881;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72932;QR=370584;RO=10380;RPL=2072;RPP=4405.52;RPPR=239.842;RPR=15;RUN=1;SAF=2072;SAP=4405.52;SAR=15;SRF=4658;SRP=239.842;SRR=5722;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:82:82,0:82:2948:0:0:0,-24.6845,-238.763	0/0:226:226,0:226:8059:0:0:0,-68.0328,-677.045	0/1:145:107,38:107:3826:38:1351:-66.0633,0,-265.347	0/1:113:99,14:99:3529:14:495:-6.70779,0,-259.388	0/1:59:36,23:36:1267:23:820:-53.4261,0,-88.7076	0/1:90:53,37:53:1900:37:1308:-82.9234,0,-122.483	0/1:83:70,13:70:2516:13:451:-14.3419,0,-183.619	0/1:230:137,93:137:4885:93:3255:-206.883,0,-334.96	0/1:157:115,42:115:4095:42:1463:-75.3328,0,-295.47	0/1:167:104,63:104:3699:63:2201:-142.881,0,-271.72	0/1:92:60,32:60:2131:32:1105:-68.9774,0,-155.567	0/1:125:89,36:89:3180:36:1259:-68.2198,0,-222.884	0/1:130:78,52:78:2774:52:1827:-113.47,0,-193.226	0/1:113:71,42:71:2536:42:1456:-90.3099,0,-182.329	0/1:122:83,39:83:2980:39:1375:-83.9347,0,-219.77	0/1:109:78,31:78:2796:31:1060:-58.6503,0,-199.859	0/0:121:121,0:121:4306:0:0:0,-36.4246,-360.414	0/0:101:101,0:101:3611:0:0:0,-30.404,-304.894	0/0:74:74,0:74:2652:0:0:0,-22.2762,-217.02	0/1:143:101,42:101:3613:42:1483:-87.4565,0,-260.675	0/0:259:259,0:259:9276:0:0:0,-77.9668,-767.932	0/0:104:104,0:104:3724:0:0:0,-31.3071,-320.115	0/1:100:73,27:73:2612:27:964:-53.1145,0,-190.075	0/0:116:116,0:116:4134:0:0:0,-34.9195,-357.177	0/0:173:173,0:173:6212:0:0:0,-52.0782,-494.518	0/0:532:531,1:531:18992:1:36:0,-156.551,-1655.01	0/0:296:296,0:296:10574:0:0:0,-89.1049,-853.385	0/0:95:95,0:95:3378:0:0:0,-28.5978,-288.119	0/1:172:138,34:138:4929:34:1207:-53.158,0,-370.703	0/1:109:91,18:91:3242:18:640:-22.2083,0,-232.163	0/1:123:95,28:95:3365:28:967:-47.5419,0,-251.836	0/1:5:3,2:3:108:2:72:-5.05838,0,-7.80347	0/0:31:31,0:31:1112:0:0:0,-9.33193,-92.6721	0/0:8:8,0:8:288:0:0:0,-2.40824,-24.7789	0/0:13:13,0:13:464:0:0:0,-3.91339,-36.7518	0/1:14:11,3:11:392:3:99:-4.59818,0,-26.8804	0/1:376:266,110:266:9469:110:3852:-225.073,0,-707.445	0/1:176:106,70:106:3796:70:2454:-157.69,0,-272.84	0/1:115:83,32:83:2951:32:1131:-61.0319,0,-210.287	0/0:4:4,0:4:144:0:0:0,-1.20412,-12.8107	0/0:215:215,0:215:7688:0:0:0,-64.7214,-610.994	0/1:47:34,13:34:1220:13:456:-25.5996,0,-88.9479	0/1:187:115,72:115:4116:72:2515:-160.569,0,-290.284	0/1:149:85,64:85:3039:64:2225:-149.881,0,-215.29	0/1:117:82,35:82:2940:35:1222:-71.1696,0,-214.329	0/0:165:165,0:165:5869:0:0:0,-49.6699,-498.406	0/1:213:148,65:148:5275:65:2275:-128.574,0,-368.375	0/1:132:97,35:97:3476:35:1203:-66.3304,0,-255.368	0/1:101:62,39:62:2216:39:1372:-89.9764,0,-156.165	0/0:175:175,0:175:6211:0:0:0,-52.6802,-531.023	0/1:66:43,23:43:1540:23:820:-52.9669,0,-114.175	0/1:10:4,6:4:144:6:216:-16.2104,0,-9.19609	0/0:195:195,0:195:6963:0:0:0,-58.7008,-579.571	0/0:68:68,0:68:2427:0:0:0,-20.47,-205.699	0/1:16:7,9:7:243:9:316:-22.4427,0,-15.8996	0/1:111:90,21:90:3205:21:724:-29.6825,0,-231.605	0/0:82:81,1:81:2908:1:36:0,-21.1818,-234.925	0/1:13:8,5:8:275:5:168:-11.3518,0,-20.6535	0/1:15:10,5:10:360:5:180:-10.4215,0,-26.7089	0/1:116:86,30:86:3058:30:1039:-55.2001,0,-221.846	0/0:221:219,0:219:7789:0:0:0,-65.9256,-668.09	0/0:8:8,0:8:288:0:0:0,-2.40824,-24.9021	0/0:282:282,0:282:10112:0:0:0,-84.8905,-881.145	0/0:250:250,0:250:8943:0:0:0,-75.2575,-757.588	0/1:81:46,35:46:1629:35:1244:-82.7393,0,-114.215	0/0:103:103,0:103:3676:0:0:0,-31.0061,-308.305	0/0:253:251,2:251:8964:2:72:0,-69.5055,-754.06	0/1:84:56,28:56:1989:28:980:-60.7784,0,-139.617	0/1:48:33,15:33:1180:15:527:-31.5397,0,-84.7361	0/1:90:47,43:47:1670:43:1504:-101.061,0,-112.208	0/1:120:71,49:71:2544:49:1697:-114.395,0,-188.65	0/0:51:51,0:51:1832:0:0:0,-15.3525,-153.158	0/0:158:158,0:158:5636:0:0:0,-47.5627,-445.37	0/1:89:67,22:67:2404:22:775:-39.3742,0,-165.355	0/0:301:300,0:300:10711:0:0:0,-90.309,-900.358	0/0:187:187,0:187:6657:0:0:0,-56.2926,-567.626	0/1:161:112,49:112:4003:49:1695:-95.8933,0,-287.068	0/1:125:84,41:84:3000:41:1451:-85.0867,0,-216.216	0/1:16:14,2:14:500:2:72:-1.61996,0,-36.7946	0/0:192:192,0:192:6878:0:0:0,-57.7978,-562.499	0/0:163:163,0:163:5840:0:0:0,-49.0679,-474.198	0/1:216:149,67:149:5336:67:2363:-141.381,0,-391.186	0/0:214:214,0:214:7633:0:0:0,-64.4204,-663.003	0/0:139:139,0:139:4954:0:0:0,-41.8432,-422.724	0/1:167:102,65:102:3629:65:2249:-145.723,0,-269.117	0/1:262:164,97:164:5838:97:3348:-215.33,0,-425.964	0/1:70:45,25:45:1586:25:864:-52.6926,0,-115.21	0/1:117:79,38:79:2799:38:1325:-76.3965,0,-197.311	0/1:110:71,39:71:2527:39:1346:-80.7883,0,-180.317	0/1:59:42,17:42:1500:17:571:-31.5709,0,-106.829	0/1:143:97,46:97:3454:46:1588:-92.9554,0,-247.851	0/1:115:53,62:53:1892:62:2163:-153.651,0,-126.539	0/0:106:106,0:106:3787:0:0:0,-31.9092,-316.265	0/0:274:274,0:274:9766:0:0:0,-82.4822,-836.975
chr02	26515062	.	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chr02	26611974	.	G	A	346989	PASS	AB=0.4622;ABP=132.863;AC=134;AF=0.712766;AN=188;AO=13299;CIGAR=1X;DP=18952;DPB=18952;DPRA=0;EPP=28812;EPPR=12243.6;GTI=0;LEN=1;MEANALT=1.11702;MQM=56.3306;MQMR=59.9846;NS=94;NUMALT=1;ODDS=3.29965;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=467838;QR=200442;RO=5641;RPL=7396;RPP=366.971;RPPR=47.772;RPR=5903;RUN=1;SAF=7404;SAP=374.814;SAR=5895;SRF=2992;SRP=48.2986;SRR=2649;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:156:0,156:0:0:156:5537:-497.251,-46.9607,0	1/1:383:2,381:2:72:381:13331:-1188.09,-108.458,0	0/1:273:154,119:154:5448:119:4198:-295.113,0,-408.273	0/1:414:217,197:217:7697:197:6979:-502.994,0,-568.141	0/1:131:82,49:82:2922:49:1712:-114.647,0,-223.777	0/1:143:65,78:65:2318:78:2761:-205.365,0,-165.832	0/1:272:130,142:130:4607:142:4980:-366.166,0,-332.916	0/1:376:186,190:186:6558:190:6525:-472.355,0,-477.111	0/1:254:130,124:130:4627:124:4371:-316.374,0,-340.131	0/1:209:128,79:128:4525:79:2836:-192.492,0,-344.737	0/1:169:77,92:77:2752:92:3132:-230.769,0,-197.048	0/1:182:103,79:103:3657:79:2791:-196.265,0,-274.547	0/1:158:80,78:80:2849:78:2742:-198.312,0,-209.084	0/1:219:117,102:117:4165:102:3573:-255.405,0,-309.108	0/1:120:62,58:62:2211:58:2031:-146.839,0,-163.131	0/1:184:89,95:89:3167:95:3238:-235.698,0,-229.866	1/1:168:0,167:0:0:167:5798:-520.476,-50.272,0	1/1:127:0,127:0:0:127:4424:-397.436,-38.2308,0	1/1:144:1,143:1:36:143:4950:-440.672,-39.75,0	1/1:391:0,391:0:0:391:13813:-1241.65,-117.703,0	1/1:254:0,254:0:0:254:8958:-805.088,-76.4616,0	1/1:174:1,173:1:36:173:6076:-543.178,-48.7809,0	0/1:137:67,70:67:2408:70:2469:-180.609,0,-175.735	1/1:245:0,245:0:0:245:8711:-782.38,-73.7524,0	1/1:136:0,136:0:0:136:4802:-431.936,-40.9401,0	1/1:398:1,397:1:36:397:14044:-1259.44,-116.212,0	1/1:379:0,379:0:0:379:13380:-1201.95,-114.09,0	1/1:80:2,78:2:57:78:2753:-242.302,-18.6691,0	1/1:466:0,466:0:0:466:16465:-1480.94,-140.28,0	0/1:170:79,91:79:2832:91:3198:-236.423,0,-203.943	0/1:244:130,114:130:4623:114:4014:-287.729,0,-342.782	0/1:9:5,4:5:180:4:140:-10.2236,0,-13.8428	0/1:48:27,21:27:957:21:737:-51.7521,0,-71.9944	1/1:7:0,7:0:0:7:252:-22.9755,-2.10721,0	1/1:8:0,8:0:0:8:280:-25.4431,-2.40824,0	0/1:24:13,11:13:468:11:388:-27.99,0,-35.2349	0/1:428:214,214:214:7574:214:7459:-542.162,0,-552.861	0/1:220:129,91:129:4587:91:3186:-219.858,0,-346.77	0/1:158:77,81:77:2726:81:2799:-203.825,0,-198.021	1/1:6:0,6:0:0:6:208:-19.0485,-1.80618,0	1/1:260:1,259:1:36:259:9115:-814.928,-74.6695,0	0/1:107:57,50:57:2028:50:1757:-125.971,0,-150.581	0/1:352:216,136:216:7677:136:4845:-329.629,0,-585.003	0/1:162:69,93:69:2476:93:3261:-244.774,0,-174.327	0/1:120:71,49:71:2495:49:1711:-118.056,0,-188.676	1/1:188:0,188:0:0:188:6605:-593.97,-56.5936,0	0/1:194:117,76:117:4159:76:2646:-179.284,0,-316.037	0/1:322:189,131:189:6749:131:4653:-321.946,0,-510.795	0/1:206:112,94:112:3950:94:3329:-237.64,0,-293.678	1/1:289:0,289:0:0:289:10225:-918.329,-86.9977,0	0/1:318:169,149:169:6008:149:5283:-379.697,0,-445.093	0/1:18:13,5:13:464:5:180:-11.1194,0,-36.6786	0/1:334:162,172:162:5762:172:6041:-441.087,0,-418.143	1/1:100:0,100:0:0:100:3533:-316.983,-30.103,0	0/1:36:24,12:24:864:12:417:-26.8522,0,-67.2455	0/1:287:157,130:157:5594:130:4589:-326.075,0,-417.186	1/1:96:0,96:0:0:96:3393:-305.519,-28.8989,0	1/1:11:0,11:0:0:11:392:-35.5849,-3.31133,0	0/1:28:16,12:16:576:12:419:-29.6021,0,-43.7461	0/1:165:95,70:95:3390:70:2473:-172.85,0,-255.645	1/1:254:7,247:7:252:247:8578:-748.207,-53.4327,0	1/1:22:0,22:0:0:22:766:-69.1899,-6.62266,0	1/1:288:1,287:1:36:287:10154:-909.608,-83.0984,0	1/1:384:1,381:1:36:381:13351:-1196.2,-111.729,0	0/1:177:102,75:102:3630:75:2650:-184.893,0,-273.623	1/1:152:1,151:1:36:151:5365:-479.051,-42.1583,0	1/1:265:0,265:0:0:265:9372:-842.253,-79.773,0	0/1:214:158,56:158:5571:56:1958:-111.752,0,-437.081	0/1:74:33,41:33:1184:41:1411:-104.782,0,-84.5921	0/1:202:119,83:119:4167:83:2919:-200.697,0,-314.406	0/1:226:116,110:116:4109:110:3815:-275.265,0,-301.962	1/1:46:0,46:0:0:46:1618:-145.861,-13.8474,0	1/1:142:0,142:0:0:142:5004:-449.238,-42.7463,0	0/1:152:102,50:102:3639:50:1709:-107.544,0,-281.959	1/1:482:0,482:0:0:482:17081:-1533.79,-145.096,0	1/1:362:1,361:1:36:361:12734:-1141.28,-105.375,0	0/1:302:151,151:151:5360:151:5335:-387.694,0,-391.622	0/1:283:158,125:158:5577:125:4393:-309.266,0,-416.867	0/1:26:16,10:16:572:10:356:-24.5118,0,-43.9866	1/1:319:0,319:0:0:319:11319:-1017.68,-96.0286,0	1/1:198:0,198:0:0:198:6958:-623.789,-59.6039,0	0/1:549:268,281:268:9549:281:9956:-729.129,0,-694.103	1/1:206:0,206:0:0:206:7213:-648.589,-62.0122,0	1/1:132:1,131:1:21:131:4592:-411.163,-37.636,0	0/1:183:94,89:94:3351:89:3127:-226.468,0,-246.719	1/1:333:2,330:2:72:330:11602:-1036.56,-93.4651,0	0/1:87:48,39:48:1683:39:1362:-96.4107,0,-125.563	0/1:153:85,67:85:3019:67:2318:-162.539,0,-225.944	0/1:180:84,94:84:3008:94:3280:-241.068,0,-217.152	0/1:142:78,64:78:2796:64:2241:-158.605,0,-209.134	0/1:196:98,98:98:3507:98:3444:-250.738,0,-256.838	0/1:126:81,45:81:2908:45:1553:-102.08,0,-224.025	1/1:204:0,204:0:0:204:7205:-647.623,-61.4101,0	1/1:234:0,234:0: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chr02	26800725	.	TTTCTA	ATTTTA,ATTTTT	234351	PASS	AB=0.531762,0.463713;ABP=49.497,63.6826;AC=135,53;AF=0.718085,0.281915;AN=188;AO=8610,2472;CIGAR=1X2M1X2M,1X2M1X1M1X;DP=11126;DPB=11126.3;DPRA=0,0.995042;EPP=18699.4,5370.89;EPPR=0;GTI=4;LEN=6,6;MEANALT=2.10638,2.40323;MQM=58.9869,47.4632;MQMR=0;NS=94;NUMALT=2;ODDS=2.04803;PAIRED=0,0;PAIREDR=0;PAO=0,6;PQA=0,140;PQR=0;PRO=0;QA=304908,87101;QR=0;RO=0;RPL=0,0;RPP=18699.4,5370.89;RPPR=0;RPR=8610,2472;RUN=1,1;SAF=8610,2472;SAP=18699.4,5370.89;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:43:0,43,0:0:0:43,0:1509,0:-136.01,-12.9443,0,-136.01,-12.9443,-136.01	1/1:187:0,185,1:0:0:185,1:6535,36:-587.523,-55.6906,0,-584.604,-52.7636,-584.302	1/2:142:0,77,65:0:0:77,65:2734,2279:-406.674,-184.254,-161.074,-222.771,0,-203.204	1/2:289:0,156,132:0:0:156,132:5518,4662:-825.129,-375.799,-328.839,-449.342,0,-409.606	1/2:76:0,41,35:0:0:41,35:1448,1251:-218.91,-101.051,-88.7085,-118.212,0,-107.676	1/2:24:0,10,14:0:0:10,14:359,482:-68.5018,-39.2884,-36.2781,-29.565,0,-25.3505	1/2:130:0,68,62:0:0:68,62:2418,2183:-371.554,-174.525,-154.055,-197.379,0,-178.715	1/2:275:0,144,130:0:0:144,130:5092,4517:-776.526,-362.316,-318.967,-414.234,0,-375.1	1/2:117:0,44,71:0:0:44,71:1551,2503:-327.935,-201.685,-188.44,-126.249,0,-104.875	1/2:105:0,64,41:0:0:64,41:2253,1439:-299.861,-116.483,-97.2171,-183.727,0,-171.385	1/2:43:0,22,21:0:0:22,21:784,737:-123.931,-60.0252,-53.4025,-64.2588,0,-57.9372	1/2:75:0,42,33:0:0:42,33:1480,1172:-214.656,-94.1925,-81.5492,-120.814,0,-110.88	1/2:64:0,30,34:0:0:30,34:1067,1209:-185.106,-98.3279,-89.297,-87.1326,0,-76.8976	1/2:79:0,45,33:0:0:45,33:1601,1166:-223.077,-92.6858,-79.1395,-130.386,0,-120.452	1/2:54:0,28,26:0:0:28,26:997,932:-157.159,-75.9274,-67.4986,-81.5879,0,-73.7611	1/2:42:0,18,24:0:0:18,24:626,847:-119.438,-68.5874,-63.1689,-51.1992,0,-43.9744	1/1:67:0,66,0:0:0:66,0:2336,0:-209.778,-19.868,0,-209.778,-19.868,-209.778	1/1:40:0,40,0:0:0:40,0:1436,0:-129.367,-12.0412,0,-129.367,-12.0412,-129.367	1/1:26:0,26,0:0:0:26,0:921,0:-83.1786,-7.82678,0,-83.1786,-7.82678,-83.1786	1/1:248:0,246,0:0:0:246,0:8766,0:-788.415,-74.0534,0,-788.415,-74.0534,-788.415	1/1:184:0,184,0:0:0:184,0:6463,0:-581.008,-55.3895,0,-581.008,-55.3895,-581.008	1/1:142:0,141,1:0:0:141,1:4987,36:-448.568,-42.4452,0,-445.857,-39.4001,-445.556	1/2:101:0,40,61:0:0:40,61:1401,2150:-287.958,-173.995,-161.954,-114.313,0,-95.9502	1/1:128:0,128,0:0:0:128,0:4549,0:-409.307,-38.5318,0,-409.307,-38.5318,-409.307	1/1:89:0,89,0:0:0:89,0:3144,0:-283.002,-26.7917,0,-283.002,-26.7917,-283.002	1/1:453:0,452,1:0:0:452,1:16039,36:-1442.04,-136.066,0,-1439.33,-133.02,-1439.03	1/1:252:0,250,0:0:0:250,0:8849,0:-795.768,-75.2575,0,-795.768,-75.2575,-795.768	1/1:27:0,27,0:0:0:27,0:950,0:-85.7587,-8.12781,0,-85.7587,-8.12781,-85.7587	1/1:377:0,376,1:0:0:376,1:13316,36:-1197.57,-113.187,0,-1194.86,-110.142,-1194.56	1/2:232:0,129,103:0:0:129,103:4573,3628:-666.073,-293.601,-254.768,-372.824,0,-341.818	1/2:145:0,65,80:0:0:65,80:2307,2802:-414.16,-226.263,-206.696,-188.248,0,-164.166	1/2:7:0,5,2:0:0:5,2:179,72:-20.795,-6.1976,-4.69245,-14.9552,0,-14.3532	1/2:11:0,7,4:0:0:7,4:251,142:-31.6244,-11.1363,-9.0291,-20.8306,0,-19.6265	1/1:9:0,9,0:0:0:9,0:312,0:-28.4051,-2.70927,0,-28.4051,-2.70927,-28.4051	1/1:6:0,6,0:0:0:6,0:210,0:-19.0803,-1.80618,0,-19.0803,-1.80618,-19.0803	1/2:9:0,8,1:0:0:8,1:288,36:-26.7724,-3.27774,-0.869497,-23.8527,0,-23.5517	1/2:194:0,104,89:0:0:104,89:3724,3159:-540.929,-237.24,-205.933,-303.702,0,-276.91	1/2:272:0,164,105:0:0:164,105:5822,3702:-773.101,-299.136,-249.767,-474.061,0,-442.453	1/2:22:0,14,7:0:0:14,7:484,250:-59.2467,-19.9252,-15.7108,-39.3877,0,-37.2805	1/1:6:0,6,0:0:0:6,0:210,0:-19.2297,-1.80618,0,-19.2297,-1.80618,-19.2297	1/1:157:0,156,0:0:0:156,0:5504,0:-494.421,-46.9607,0,-494.421,-46.9607,-494.421	1/2:21:0,11,10:0:0:11,10:393,359:-61.5118,-29.4694,-26.158,-32.3995,0,-29.3892	1/2:145:0,75,70:0:0:75,70:2668,2466:-417.078,-199.696,-177.119,-217.568,0,-196.495	1/2:64:0,36,25:0:0:36,25:1259,898:-175.262,-72.8958,-62.0587,-102.446,0,-94.9207	1/2:59:0,35,23:0:0:35,23:1251,822:-166.769,-64.7904,-54.2543,-101.97,0,-95.0468	1/1:107:0,107,0:0:0:107,0:3752,0:-337.451,-32.2102,0,-337.451,-32.2102,-337.451	1/2:224:0,120,102:0:0:120,102:4235,3599:-635.104,-290.773,-254.65,-344.336,0,-313.63	1/2:245:0,135,109:0:0:135,109:4754,3852:-696.97,-310.154,-269.515,-386.84,0,-354.028	1/2:133:0,58,73:0:0:58,73:2039,2562:-370.935,-204.976,-187.516,-165.963,0,-143.988	1/1:185:0,183,0:0:0:183,0:6508,0:-585.376,-55.0885,0,-585.376,-55.0885,-585.376	1/2:132:0,82,49:0:0:82,49:2903,1726:-367.245,-130.784,-106.099,-236.452,0,-221.702	1/2:6:0,2,4:0:0:2,4:72,136:-16.7497,-10.8928,-10.2907,-6.20477,0,-5.00065	1/2:130:0,65,65:0:0:65,65:2279,2298:-370.561,-185.654,-166.087,-185.257,0,-165.69	1/1:84:0,84,0:0:0:84,0:2977,0:-268.118,-25.2865,0,-268.118,-25.2865,-268.118	1/2:16:0,14,2:0:0:14,2:484,72:-45.5035,-6.1976,-1.98318,-39.6622,0,-39.0601	1/1:182:0,181,1:0:0:181,1:6388,34:-574.507,-54.4864,0,-571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chr03	741905	.	C	A	21746.5	PASS	AB=0.475142;ABP=18.1242;AC=39;AF=0.207447;AN=188;AO=1341;CIGAR=1X;DP=7231;DPB=7231;DPRA=0.900621;EPP=2914.95;EPPR=12788.6;GTI=1;LEN=1;MEANALT=1;MQM=49.7554;MQMR=59.4506;NS=94;NUMALT=1;ODDS=6.76823;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48071;QR=210209;RO=5888;RPL=1341;RPP=2914.95;RPPR=12788.6;RPR=0;RUN=1;SAF=0;SAP=2914.95;SAR=1341;SRF=0;SRP=12788.6;SRR=5888;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:25:15,10:15:540:10:356:-24.7577,0,-41.4108	0/1:50:26,24:26:936:24:860:-61.1607,0,-69.4916	0/1:71:37,34:37:1320:34:1224:-88.2109,0,-97.6705	0/0:128:127,0:127:4525:0:0:0,-38.2308,-406.957	0/0:41:41,0:41:1434:0:0:0,-12.3422,-129.352	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4082	0/0:116:116,0:116:4140:0:0:0,-34.9195,-372.205	0/1:76:33,43:33:1169:43:1532:-112.895,0,-82.6256	0/0:112:112,0:112:4000:0:0:0,-33.7154,-360.148	0/0:94:93,0:93:3313:0:0:0,-27.9958,-297.952	0/0:121:121,0:121:4319:0:0:0,-36.4246,-388.75	0/0:120:120,0:120:4300:0:0:0,-36.1236,-386.88	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.04	0/0:176:176,0:176:6296:0:0:0,-52.9813,-566.123	0/0:74:74,0:74:2652:0:0:0,-22.2762,-238.873	0/0:90:90,0:90:3207:0:0:0,-27.0927,-288.779	0/0:61:61,0:61:2196:0:0:0,-18.3628,-197.89	0/0:35:35,0:35:1243:0:0:0,-10.536,-112.166	0/0:67:67,0:67:2383:0:0:0,-20.169,-214.717	0/0:116:116,0:116:4148:0:0:0,-34.9195,-373.175	0/0:114:114,0:114:4065:0:0:0,-34.3174,-365.993	0/1:44:12,32:12:432:32:1144:-89.2396,0,-25.9582	0/0:65:65,0:65:2320:0:0:0,-19.5669,-209.021	0/1:48:31,17:31:1108:17:612:-40.7256,0,-85.5816	0/1:74:43,31:43:1540:31:1112:-76.923,0,-116.617	0/1:167:97,70:97:3465:70:2512:-174.007,0,-261.698	0/0:133:133,0:133:4756:0:0:0,-40.037,-428.02	0/1:35:23,12:23:828:12:432:-28.5566,0,-64.2965	0/1:108:59,49:59:2108:49:1752:-124.121,0,-157.441	0/0:61:61,0:61:2180:0:0:0,-18.3628,-196.466	0/0:69:69,0:69:2448:0:0:0,-20.7711,-220.57	0/1:9:4,5:4:144:5:180:-13.7885,0,-10.6043	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.238	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:10:10,0:10:352:0:0:0,-3.0103,-31.9331	0/0:20:19,1:19:657:1:36:0,-2.43137,-55.8521	0/0:233:233,0:233:8327:0:0:0,-70.14,-749.302	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.654	0/1:93:46,47:46:1648:47:1683:-123.094,0,-120.613	0/1:7:6,1:6:212:1:36:-0.713871,0,-17.3176	0/1:98:56,42:56:2008:42:1504:-105.758,0,-151.481	0/1:58:24,34:24:864:34:1224:-92.0304,0,-60.6228	0/1:62:33,29:33:1172:29:1040:-74.6304,0,-87.1014	0/1:75:38,37:38:1360:37:1332:-96.5217,0,-100.104	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.162	0/1:63:19,44:19:676:44:1572:-122.068,0,-41.5735	0/1:63:35,28:35:1244:28:1004:-71.1395,0,-93.2998	0/0:88:88,0:88:3083:0:0:0,-26.4906,-277.55	0/0:77:77,0:77:2744:0:0:0,-23.1793,-246.99	0/1:62:37,25:37:1319:25:900:-61.8847,0,-100.334	0/0:108:108,0:108:3849:0:0:0,-32.5112,-346.422	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:83:45,38:45:1620:38:1364:-97.7698,0,-121.083	0/0:51:51,0:51:1801:0:0:0,-15.3525,-162.352	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8554	0/1:68:38,30:38:1356:30:1080:-76.0493,0,-101.87	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8564	0/1:12:8,4:8:288:4:144:-9.62908,0,-22.6495	0/1:20:10,10:10:360:10:351:-25.5323,0,-26.7237	0/1:98:66,32:66:2368:32:1137:-72.4553,0,-183.845	0/0:150:150,0:150:5371:0:0:0,-45.1545,-482.197	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:96:55,41:55:1972:41:1460:-101.545,0,-148.814	0/0:129:128,1:128:4550:1:36:0,-35.2498,-405.73	0/1:58:35,23:35:1252:23:824:-56.7847,0,-95.5253	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/0:110:110,0:110:3913:0:0:0,-33.1133,-350.88	0/1:174:61,113:61:2188:113:4048:-309.586,0,-144.646	0/0:115:115,0:115:4128:0:0:0,-34.6184,-370.613	0/1:37:18,19:18:648:19:680:-50.2485,0,-47.5138	0/1:56:29,27:29:1032:27:968:-69.492,0,-76.0478	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.0272	0/0:128:128,0:128:4560:0:0:0,-38.5318,-410.182	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.269	0/0:206:206,0:206:7306:0:0:0,-62.0122,-657.43	0/0:80:79,1:79:2828:1:36:0,-20.4993,-251.112	0/1:45:21,24:21:756:24:856:-63.4325,0,-54.8118	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.81	0/1:12:8,4:8:284:4:144:-9.66779,0,-22.2793	0/0:47:47,0:47:1667:0:0:0,-14.1484,-150.312	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.61	0/0:60:60,0:60:2148:0:0:0,-18.0618,-193.552	0/1:58:36,22:36:1288:22:792:-52.799,0,-98.7222	0/1:98:42,56:42:1508:56:2012:-149.989,0,-106.486	0/1:49:29,20:29:1031:20:720:-50.0707,0,-78.338	0/1:133:62,71:62:2220:71:2552:-188.002,0,-160.013	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.626	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.496	0/0:97:97,0:97:3458:0:0:0,-29.1999,-311.373	0/1:133:84,49:84:3020:49:1764:-118.262,0,-231.53	0/1:224:129,95:129:4603:95:3404:-236.908,0,-346.94	0/1:74:28,46:28:1004:46:1652:-125.837,0,-68.3996	0/0:152:152,0:152:5371:0:0:0,-45.7566,-483.43	0/0:95:95,0:95:3416:0:0:0,-28.5978,-307.557
chr03	846207	.	G	A	14947.8	PASS	AB=0.401791;ABP=152.718;AC=32;AF=0.170213;AN=188;AO=737;CIGAR=1X;DP=6142;DPB=6142;DPRA=0.832493;EPP=20.4793;EPPR=19.2415;GTI=2;LEN=1;MEANALT=1;MQM=59.9647;MQMR=59.9948;NS=94;NUMALT=1;ODDS=6.20407;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26408;QR=192432;RO=5405;RPL=1;RPP=1594.71;RPPR=7079.8;RPR=736;RUN=1;SAF=331;SAP=19.5836;SAR=406;SRF=3407;SRP=800.602;SRR=1998;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:12,12:12:432:12:432:-31.9965,0,-31.9965	0/1:36:24,12:24:856:12:432:-28.3841,0,-66.524	0/1:53:28,25:28:1000:25:900:-65.3664,0,-74.3608	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:15:15,0:15:531:0:0:0,-4.51545,-48.1219	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.3154	0/1:37:27,10:27:968:10:351:-20.7886,0,-76.2993	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/0:29:28,1:28:1000:1:32:0,-5.53056,-87.1161	0/0:174:174,0:174:6199:0:0:0,-52.3792,-558.01	0/0:124:124,0:124:4393:0:0:0,-37.3277,-395.546	0/0:139:139,0:139:4963:0:0:0,-41.8432,-446.82	0/0:74:74,0:74:2630:0:0:0,-22.2762,-236.947	0/0:105:105,0:105:3742:0:0:0,-31.6081,-336.981	0/0:98:97,1:97:3472:1:36:0,-25.9027,-309.094	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.713	0/0:77:77,0:77:2752:0:0:0,-23.1793,-247.922	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.553	0/0:35:35,0:35:1234:0:0:0,-10.536,-111.363	0/0:36:36,0:36:1279:0:0:0,-10.8371,-115.412	0/1:11:2,9:2:68:9:324:-26.1945,0,-3.14638	0/0:37:37,0:37:1305:0:0:0,-11.1381,-117.749	0/1:24:12,12:12:432:12:428:-31.6341,0,-31.9965	0/1:11:9,2:9:320:2:72:-3.52539,0,-25.831	0/1:42:20,22:20:716:22:792:-58.9624,0,-52.1245	0/0:55:55,0:55:1963:0:0:0,-16.5566,-176.945	0/1:43:19,24:19:672:24:860:-64.7775,0,-47.8625	0/1:47:26,21:26:928:21:756:-54.2188,0,-69.6898	0/1:9:8,1:8:288:1:32:-0.490043,0,-23.5581	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.613	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.102	0/0:83:83,0:83:2944:0:0:0,-24.9855,-265.196	0/0:85:85,0:85:3024:0:0:0,-25.5875,-272.392	0/0:151:151,0:151:5401:0:0:0,-45.4555,-486.219	0/0:93:93,0:93:3317:0:0:0,-27.9958,-298.747	0/0:243:243,0:243:8645:0:0:0,-73.1503,-778.05	0/0:6:6,0:6:203:0:0:0,-1.80618,-18.6012	0/1:114:68,46:68:2414:46:1639:-113.481,0,-183.198	0/0:93:93,0:93:3321:0:0:0,-27.9958,-299.107	0/1:42:24,18:24:851:18:644:-45.6473,0,-64.2662	0/1:81:65,16:65:2305:16:576:-27.7916,0,-183.326	0/1:43:19,24:19:684:24:848:-63.6931,0,-48.946	0/1:83:56,27:56:1999:27:961:-61.8077,0,-155.198	0/0:84:84,0:84:2979:0:0:0,-25.2865,-268.344	0/1:27:13,14:13:453:14:504:-37.5703,0,-32.9718	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/0:33:33,0:33:1175:0:0:0,-9.93399,-106.057	0/1:19:8,11:8:288:11:396:-30.2632,0,-20.5478	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:117:117,0:117:4164:0:0:0,-35.2205,-374.943	0/1:20:13,7:13:464:7:248:-16.6436,0,-36.0769	0/0:12:12,0:12:415:0:0:0,-3.61236,-37.6803	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/1:34:23,11:23:812:11:396:-25.7477,0,-63.1659	0/0:16:16,0:16:564:0:0:0,-4.81648,-51.0903	0/0:57:57,0:57:2039:0:0:0,-17.1587,-183.781	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/1:26:14,12:14:500:12:428:-31.032,0,-37.5094	0/0:109:109,0:109:3850:0:0:0,-32.8123,-346.697	0/0:40:40,0:40:1424:0:0:0,-12.0412,-128.457	0/0:139:129,10:129:4594:10:356:0,-9.46192,-381.242	0/0:26:25,1:25:896:1:36:0,-4.2285,-77.3621	0/1:21:12,9:12:415:9:324:-23.1796,0,-31.3587	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:32:31,1:31:1093:1:36:0,-6.03468,-95.0794	0/1:32:9,23:9:320:23:828:-65.2112,0,-19.5094	0/0:220:220,0:220:7846:0:0:0,-66.2266,-706.171	0/0:15:15,0:15:524:0:0:0,-4.51545,-47.4896	0/1:68:39,29:39:1374:29:1044:-73.8048,0,-103.487	0/0:54:54,0:54:1913:0:0:0,-16.2556,-172.445	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:34:33,1:33:1184:1:36:0,-6.63674,-103.27	0/1:25:19,6:19:684:6:212:-11.899,0,-54.3646	0/0:45:45,0:45:1577:0:0:0,-13.5463,-142.218	0/0:51:49,2:49:1756:2:72:0,-8.51581,-151.487	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:38:37,1:37:1314:1:36:0,-7.84086,-114.962	0/0:55:55,0:55:1949:0:0:0,-16.5566,-175.647	0/1:83:36,47:36:1280:47:1692:-127.581,0,-90.5177	0/1:88:51,37:51:1799:37:1328:-93.3316,0,-135.687	0/1:101:52,49:52:1860:49:1760:-128.28,0,-137.276	0/1:172:83,89:83:2955:89:3185:-235.096,0,-214.407	0/0:44:44,0:44:1562:0:0:0,-13.2453,-140.87	0/0:100:100,0:100:3526:0:0:0,-30.103,-317.55	0/0:104:104,0:104:3710:0:0:0,-31.3071,-334.102	0/1:132:112,20:112:4007:20:720:-25.3928,0,-321.083	0/1:165:139,26:139:4940:26:936:-34.8895,0,-395.082	0/1:74:27,47:27:959:47:1684:-129.571,0,-64.3492	0/0:293:293,0:293:10357:0:0:0,-88.2018,-932.062	0/0:172:171,1:171:6116:1:36:0,-48.1789,-546.943
chr03	1018985	.	G	A	66707.1	PASS	AB=0.442746;ABP=291.695;AC=92;AF=0.489362;AN=188;AO=4489;CIGAR=1X;DP=10149;DPB=10149;DPRA=22.0413;EPP=9750.75;EPPR=12254.5;GTI=6;LEN=1;MEANALT=1.06522;MQM=51.2589;MQMR=47.226;NS=94;NUMALT=1;ODDS=1.01128;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160155;QR=199779;RO=5654;RPL=1;RPP=9742.07;RPPR=12280.5;RPR=4488;RUN=1;SAF=1;SAP=9742.07;SAR=4488;SRF=3;SRP=12254.5;SRR=5651;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:15,21:15:512:21:748:-50.2013,0,-35.2797	0/1:119:54,65:54:1936:65:2335:-155.637,0,-137.056	0/1:88:37,51:37:1303:51:1832:-126.313,0,-89.7696	0/1:168:118,50:118:4184:50:1747:-106.645,0,-322.176	0/1:72:48,24:48:1675:24:847:-54.7816,0,-125.228	0/1:51:35,16:35:1247:16:572:-36.4527,0,-96.444	0/1:136:81,55:81:2882:55:1964:-136.088,0,-214.772	0/1:115:40,75:40:1394:75:2668:-189.115,0,-90.1744	0/1:151:94,57:94:3337:57:2044:-138.768,0,-252.422	0/1:130:87,43:87:3084:43:1531:-98.9326,0,-235.412	0/1:70:45,25:45:1574:25:888:-59.1578,0,-119.785	0/1:114:62,52:62:2151:52:1860:-133.319,0,-157.543	0/1:104:63,41:63:2234:41:1463:-100.605,0,-168.527	0/1:80:60,20:60:2077:20:720:-41.0357,0,-161.462	0/1:89:47,42:47:1642:42:1504:-108.836,0,-117.886	0/1:68:31,37:31:1090:37:1311:-97.8108,0,-77.308	0/1:71:48,23:48:1678:23:824:-52.9853,0,-128.635	0/1:82:45,37:45:1583:37:1324:-94.6363,0,-115.89	0/1:53:35,18:35:1252:18:636:-41.613,0,-95.7669	0/1:223:178,45:178:6322:45:1605:-77.1787,0,-496.049	0/1:185:111,74:111:3876:74:2652:-183.146,0,-289.722	0/1:97:28,69:28:993:69:2467:-170.76,0,-59.8441	0/1:89:71,18:71:2535:18:648:-31.8455,0,-199.227	0/1:169:101,68:101:3611:68:2436:-168.497,0,-269.685	0/1:73:22,51:22:775:51:1787:-127.306,0,-47.6548	0/1:257:101,155:101:3532:155:5515:-378.555,0,-234.905	0/1:268:174,93:174:6172:93:3335:-219.233,0,-467.872	0/1:45:29,16:29:1017:16:564:-37.5397,0,-76.6351	0/1:232:110,122:110:3915:122:4317:-291.475,0,-278.571	0/1:150:96,54:96:3422:54:1914:-126.323,0,-260.199	0/1:117:70,47:70:2464:47:1688:-116.985,0,-182.426	0/1:4:3,1:3:108:1:36:-2.04204,0,-8.8015	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.3768	0/1:6:4,2:4:140:2:72:-5.03054,0,-11.0681	0/1:5:4,1:4:135:1:36:-2.09312,0,-10.9055	0/1:10:2,8:2:72:8:280:-20.6915,0,-3.77922	0/1:292:167,125:167:5872:125:4459:-313.404,0,-436.603	0/1:149:91,57:91:3187:57:2032:-138.235,0,-239.446	0/1:80:39,41:39:1372:41:1464:-99.328,0,-98.8072	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.2217	0/1:660:326,334:326:11586:334:11916:-808.791,0,-832.976	0/1:53:14,39:14:487:39:1400:-102.375,0,-27.4767	0/1:127:56,71:56:1991:71:2531:-178.725,0,-139.937	0/1:84:36,48:36:1258:48:1702:-116.725,0,-86.7764	0/1:70:42,28:42:1472:28:1004:-69.2327,0,-110.668	0/1:102:42,60:42:1495:60:2147:-142.772,0,-101.499	0/1:139:105,34:105:3719:34:1216:-67.3282,0,-287.599	0/1:148:110,38:110:3908:38:1355:-77.2705,0,-303.633	0/1:160:123,37:123:4389:37:1328:-71.6574,0,-339.14	0/1:113:50,63:50:1773:63:2256:-150.12,0,-121.974	0/1:144:101,43:101:3563:43:1511:-91.1027,0,-274.344	0/0:6:6,0:6:201:0:0:0,-1.80618,-17.8936	0/1:229:116,113:116:4122:113:4049:-268.908,0,-297.504	0/1:56:49,7:49:1740:7:248:-5.80651,0,-138.979	0/1:43:23,20:23:809:20:710:-51.2628,0,-59.6888	0/1:110:40,70:40:1427:70:2520:-174.914,0,-94.5822	0/1:70:55,15:55:1948:15:527:-26.6881,0,-152.639	0/1:8:4,4:4:144:4:144:-9.38597,0,-10.8135	0/1:10:3,7:3:108:7:239:-17.849,0,-6.99532	0/1:82:28,54:28:993:54:1935:-139.419,0,-64.0302	0/1:149:91,58:91:3178:58:2071:-141.46,0,-235.414	0/1:9:7,2:7:248:2:72:-4.12745,0,-19.7854	0/1:88:47,41:47:1684:41:1463:-96.6888,0,-124.286	0/1:235:152,83:152:5392:83:2964:-196.167,0,-406.885	0/1:58:13,45:13:464:45:1612:-119.263,0,-23.2689	0/1:78:55,23:55:1963:23:813:-49.9024,0,-150.509	0/1:193:131,62:131:4595:62:2220:-141.965,0,-350.281	0/1:109:39,70:39:1364:70:2512:-174.814,0,-88.3111	0/1:32:23,9:23:810:9:324:-19.8729,0,-63.0972	0/1:84:32,52:32:1148:52:1809:-137.775,0,-77.5822	0/1:66:23,43:23:824:43:1522:-107.817,0,-54.0162	0/1:14:6,8:6:216:8:284:-21.6889,0,-15.403	0/1:172:115,56:115:4055:56:2014:-129.679,0,-310.245	0/1:85:62,23:62:2202:23:828:-49.255,0,-170.693	0/1:148:82,66:82:2858:66:2357:-167.376,0,-211.28	0/1:181:120,60:120:4233:60:2156:-139.679,0,-322.765	0/1:110:40,70:40:1432:70:2499:-173.088,0,-94.0686	0/1:110:81,29:81:2891:29:1044:-60.8081,0,-224.841	0/1:5:2,3:2:72:3:108:-7.52946,0,-5.28437	0/1:103:62,41:62:2193:41:1464:-101.017,0,-164.754	0/1:117:65,52:65:2287:52:1868:-133.031,0,-168.211	0/1:167:91,76:91:3203:76:2715:-194.274,0,-234.651	0/1:93:29,64:29:1019:64:2278:-158.583,0,-63.2494	0/1:72:24,48:24:796:48:1720:-120.377,0,-49.3647	0/1:95:26,69:26:915:69:2464:-179.136,0,-53.3104	0/1:149:49,99:49:1699:99:3507:-247.245,0,-106.379	0/1:82:46,36:46:1631:36:1290:-91.7036,0,-118.846	0/1:99:58,41:58:2011:41:1472:-102.974,0,-150.238	0/1:111:66,45:66:2308:45:1603:-111.138,0,-173.222	0/1:45:15,30:15:536:30:1072:-77.6535,0,-34.7039	0/1:104:31,73:31:1096:73:2584:-185.492,0,-66.2147	0/1:75:20,55:20:716:55:1963:-141.832,0,-41.6101	0/1:89:67,22:67:2386:22:792:-44.7441,0,-184.946	0/1:147:97,50:97:3434:50:1792:-116.912,0,-261.312
chr03	1019005	.	C	G	98350.6	PASS	AB=0.556404;ABP=281.531;AC=96;AF=0.510638;AN=188;AO=5618;CIGAR=1X;DP=10089;DPB=10089;DPRA=0;EPP=11635.8;EPPR=9218.33;GTI=6;LEN=1;MEANALT=1.06383;MQM=47.2307;MQMR=51.194;NS=94;NUMALT=1;ODDS=0.896756;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199461;QR=159571;RO=4465;RPL=5555;RPP=11661.3;RPPR=9226.8;RPR=63;RUN=1;SAF=3;SAP=12176.3;SAR=5615;SRF=1;SRP=9689.95;SRR=4464;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:35:20,15:20:716:15:514:-35.7808,0,-47.9955	0/1:116:64,52:64:2296:52:1839:-129.451,0,-153.226	0/1:87:50,37:50:1754:37:1328:-92.4412,0,-121.095	0/1:167:49,118:49:1747:118:4195:-323.688,0,-106.806	0/1:69:23,46:23:828:46:1640:-123.27,0,-54.0372	0/1:50:15,35:15:540:35:1235:-95.7178,0,-33.8768	0/1:137:56,81:56:1988:81:2885:-214.92,0,-137.937	0/1:115:77,38:77:2754:38:1364:-86.8843,0,-196.41	0/1:151:57,94:57:2029:94:3304:-249.58,0,-137.417	0/1:132:45,87:45:1608:87:3076:-234.177,0,-105.252	0/1:68:24,44:24:864:44:1580:-120.816,0,-57.5901	0/1:111:52,59:52:1860:59:2103:-153.966,0,-134.222	0/1:106:41,65:41:1467:65:2299:-173.605,0,-100.363	0/1:80:21,59:21:752:59:2078:-161.655,0,-43.9132	0/1:87:41,46:41:1457:46:1647:-119.561,0,-105.207	0/1:66:36,30:36:1296:30:1080:-76.972,0,-97.0535	0/1:71:24,47:24:860:47:1683:-128.716,0,-56.3311	0/1:84:37,47:37:1332:47:1657:-122.215,0,-94.7545	0/1:51:16,35:16:572:35:1247:-95.9685,0,-36.4605	0/1:224:45,179:45:1612:179:6371:-500.068,0,-77.4983	0/1:186:73,113:73:2607:113:4015:-301.337,0,-178.797	0/1:98:71,27:71:2531:27:959:-56.5241,0,-175.484	0/1:92:18,74:18:648:74:2639:-207.286,0,-30.9424	0/1:168:67,101:67:2412:101:3549:-264.553,0,-166.639	0/1:70:47,23:47:1684:23:810:-51.6834,0,-118.389	0/1:261:158,103:158:5639:103:3644:-243.391,0,-387.11	0/1:272:94,178:94:3365:178:6341:-481.027,0,-220.739	0/1:45:17,28:17:604:28:978:-73.5903,0,-40.2797	0/1:225:119,105:119:4238:105:3725:-264.44,0,-285.797	0/1:149:52,97:52:1868:97:3480:-264.758,0,-122.59	0/1:116:46,70:46:1648:70:2484:-183.718,0,-113.688	0/1:4:1,3:1:36:3:108:-8.8015,0,-2.04204	0/1:10:2,8:2:72:8:288:-23.0758,0,-3.82642	0/1:6:2,4:2:72:4:144:-11.4351,0,-5.03054	0/1:5:1,4:1:36:4:144:-11.7166,0,-2.09312	0/1:10:8,2:8:273:2:72:-3.77922,0,-19.8502	0/1:284:118,166:118:4232:166:5870:-438.342,0,-295.346	0/1:148:57,91:57:2040:91:3251:-245.401,0,-139.275	0/1:82:43,39:43:1536:39:1388:-99.681,0,-104.769	1/1:4:0,4:0:0:4:144:-13.2217,-1.20412,0	0/1:656:331,324:331:11860:324:11497:-826.458,0,-804.763	0/1:53:39,14:39:1400:14:495:-28.1634,0,-102.375	0/1:124:72,52:72:2580:52:1838:-127.196,0,-183.083	0/1:82:48,34:48:1720:34:1196:-81.7874,0,-118.124	0/1:70:29,41:29:1040:41:1472:-110.615,0,-72.1003	0/1:102:62,40:62:2216:40:1406:-94.2472,0,-147.571	0/1:141:32,109:32:1148:109:3850:-298.68,0,-61.167	0/1:147:41,106:41:1472:106:3773:-292.296,0,-88.098	0/1:155:37,118:37:1324:118:4191:-325.117,0,-72.8024	0/1:111:63,48:63:2268:48:1708:-117.164,0,-152.836	0/1:141:44,97:44:1576:97:3420:-262.319,0,-97.5494	1/1:6:0,6:0:0:6:212:-18.8905,-1.80618,0	0/1:226:110,116:110:3937:116:4117:-298.133,0,-259.975	0/1:57:7,50:7:252:50:1775:-141.843,0,-5.87025	0/1:42:19,23:19:669:23:820:-60.9699,0,-47.8883	0/1:112:74,38:74:2660:38:1356:-87.6456,0,-185.218	0/1:71:15,55:15:540:55:1976:-154.735,0,-27.5076	0/1:8:4,4:4:144:4:144:-10.8135,0,-9.38597	0/1:10:6,4:6:201:4:135:-9.31362,0,-14.2621	0/1:82:54,28:54:1928:28:991:-63.8762,0,-139.162	0/1:144:55,89:55:1957:89:3123:-231.57,0,-132.681	0/1:9:2,7:2:72:7:240:-19.09,0,-4.12745	0/1:87:41,46:41:1468:46:1629:-119.724,0,-97.0028	0/1:230:82,148:82:2923:148:5239:-396.043,0,-193.427	0/1:57:45,12:45:1604:12:428:-21.4427,0,-118.844	0/1:78:22,56:22:792:56:1995:-153.437,0,-48.019	0/1:193:60,133:60:2152:133:4705:-359.302,0,-135.848	0/1:111:71,40:71:2548:40:1423:-92.7731,0,-176.89	0/1:32:9,23:9:316:23:819:-63.8902,0,-19.1459	0/1:84:52,32:52:1864:32:1135:-76.3963,0,-142.731	0/1:68:44,24:44:1567:24:847:-55.1447,0,-110.761	0/1:13:8,5:8:284:5:176:-12.144,0,-21.99	0/1:169:54,114:54:1932:114:4078:-312.251,0,-123.17	0/1:85:23,62:23:820:62:2171:-168.357,0,-48.5334	0/1:143:62,81:62:2224:81:2882:-214.839,0,-156.884	0/1:178:60,118:60:2139:118:4188:-319.243,0,-139.175	0/1:107:69,38:69:2445:38:1326:-85.9504,0,-169.432	0/1:109:28,81:28:1008:81:2888:-225.06,0,-57.8707	0/1:5:3,2:3:108:2:72:-5.28437,0,-7.52946	0/1:103:42,61:42:1504:61:2192:-164.613,0,-104.615	0/1:117:54,63:54:1901:63:2264:-165.928,0,-135.998	0/1:169:77,92:77:2755:92:3269:-239.848,0,-196.414	0/1:90:61,29:61:2188:29:1014:-63.6784,0,-151.788	0/1:72:48,24:48:1715:24:864:-55.2531,0,-120.766	0/1:94:67,26:67:2374:26:932:-55.1252,0,-171.56	0/1:147:96,50:96:3413:50:1773:-113.459,0,-239.097	0/1:83:37,46:37:1328:46:1637:-118.701,0,-94.8181	0/1:101:44,57:44:1568:57:2020:-150.355,0,-111.008	0/1:110:45,65:45:1594:65:2320:-174.498,0,-110.579	0/1:44:29,15:29:1036:15:527:-34.1966,0,-73.5233	0/1:107:74,33:74:2644:33:1178:-72.4052,0,-189.496	0/1:74:54,20:54:1932:20:716:-41.9111,0,-139.562	0/1:90:22,68:22:779:68:2432:-189.068,0,-43.2695	0/1:148:51,97:51:1809:97:3429:-260.033,0,-118.155
chr03	1019018	.	TG	CG	121245	PASS	AB=0.68707;ABP=3052.08;AC=100;AF=0.531915;AN=188;AO=7014;CIGAR=1X1M;DP=10162;DPB=10162;DPRA=0;EPP=15207.7;EPPR=6754.16;GTI=13;LEN=1;MEANALT=1.19149;MQM=44.569;MQMR=59.3309;NS=94;NUMALT=1;ODDS=0.923608;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=247020;QR=110600;RO=3125;RPL=7014;RPP=15233.7;RPPR=6754.16;RPR=0;RUN=1;SAF=3;SAP=15207.7;SAR=7011;SRF=0;SRP=6788.86;SRR=3125;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:4,32:4:144:32:1092:-82.8535,0,-2.47654	0/1:115:18,97:18:648:97:3400:-258.06,0,-24.0158	0/1:88:19,69:19:684:69:2394:-179.56,0,-35.382	0/1:167:51,116:51:1804:116:4146:-319.421,0,-111.979	0/1:71:24,47:24:856:47:1657:-126.378,0,-55.8952	0/1:51:16,32:16:572:32:1144:-87.6894,0,-36.9964	0/1:136:57,79:57:2028:79:2806:-208.673,0,-141.837	0/1:117:25,92:25:877:92:3204:-238.432,0,-44.0117	0/1:154:59,94:59:2057:94:3347:-252.56,0,-138.785	0/1:134:45,89:45:1592:89:3153:-240.896,0,-103.208	0/1:69:25,44:25:880:44:1568:-119.482,0,-58.7309	0/1:115:54,61:54:1916:61:2161:-158.255,0,-138.055	0/1:103:42,61:42:1488:61:2183:-164.236,0,-103.153	0/1:79:22,56:22:782:56:1991:-154.091,0,-46.8532	0/1:89:42,47:42:1497:47:1668:-121.347,0,-108.214	0/1:70:39,31:39:1367:31:1112:-78.637,0,-102.232	0/1:72:25,47:25:874:47:1651:-125.857,0,-57.1248	0/1:84:35,46:35:1256:46:1638:-121.461,0,-88.501	0/1:52:19,33:19:667:33:1178:-89.5555,0,-44.7006	0/1:223:44,178:44:1566:178:6366:-499.88,0,-73.9735	0/1:187:76,111:76:2696:111:3904:-292.362,0,-186.522	0/1:97:16,81:16:561:81:2796:-207.608,0,-21.6179	0/1:88:17,71:17:606:71:2509:-197.194,0,-28.3672	0/1:169:68,101:68:2424:101:3553:-265.4,0,-167.417	0/1:72:17,55:17:584:55:1913:-142.165,0,-31.2069	0/1:254:59,195:59:2110:195:6727:-500.099,0,-113.67	0/1:274:97,177:97:3421:177:6309:-478.913,0,-225.233	0/1:45:17,28:17:590:28:996:-75.7777,0,-39.1621	0/1:223:52,171:52:1834:171:5968:-449.236,0,-98.1389	0/1:153:52,101:52:1862:101:3593:-273.508,0,-121.776	0/1:116:48,68:48:1713:68:2412:-179.988,0,-119.533	1/1:4:0,4:0:0:4:143:-12.8754,-1.20412,0	0/1:9:2,7:2:72:7:248:-19.8094,0,-4.12745	0/1:6:2,4:2:67:4:144:-11.4351,0,-4.55666	0/1:5:1,4:1:36:4:144:-11.7166,0,-2.09312	0/1:9:2,7:2:70:7:247:-18.4492,0,-3.93806	0/1:291:125,165:125:4426:165:5898:-439.004,0,-310.861	0/1:145:58,87:58:2063:87:3098:-232.996,0,-142.246	0/1:83:16,67:16:565:67:2349:-178.347,0,-26.1954	1/1:4:0,4:0:0:4:144:-13.2217,-1.20412,0	0/1:652:156,496:156:5545:496:17456:-1319.63,0,-302.691	0/1:53:16,37:16:567:37:1291:-93.7717,0,-35.085	0/1:126:36,90:36:1261:90:3159:-235.924,0,-75.4673	0/1:85:19,66:19:677:66:2270:-169.86,0,-35.6707	0/1:72:27,45:27:946:45:1590:-120.098,0,-63.7775	1/1:104:8,96:8:277:96:3298:-255.379,-6.04201,0	0/1:138:33,105:33:1169:105:3698:-287.545,0,-63.9563	0/1:151:41,109:41:1446:109:3880:-300.028,0,-84.8638	0/1:158:37,121:37:1322:121:4283:-333.776,0,-71.7198	0/1:111:15,96:15:527:96:3326:-250.868,0,-14.3456	0/1:148:45,103:45:1577:103:3648:-279.848,0,-96.877	1/1:6:0,5:0:0:5:168:-14.7292,-1.50515,0	0/1:227:43,183:43:1539:183:6443:-489.514,0,-70.3845	0/1:57:8,49:8:280:49:1760:-140.439,0,-8.3808	0/1:43:20,23:20:699:23:816:-60.3249,0,-50.284	0/1:114:19,95:19:680:95:3310:-247.433,0,-26.5079	0/1:69:15,54:15:538:54:1933:-151.727,0,-27.9847	1/1:8:0,8:0:0:8:280:-24.3546,-2.40824,0	0/1:11:3,8:3:104:8:266:-19.7659,0,-6.39148	0/1:80:24,55:24:825:55:1914:-140.125,0,-50.525	0/1:151:59,92:59:2060:92:3261:-245.079,0,-139.847	0/1:9:2,7:2:72:7:252:-20.1332,0,-4.12745	0/1:90:16,74:16:576:74:2577:-197.211,0,-25.0819	0/1:235:85,147:85:3011:147:5191:-391.229,0,-198.875	0/1:57:21,36:21:741:36:1237:-88.2177,0,-49.8536	0/1:79:23,56:23:811:56:1975:-152.313,0,-49.4222	0/1:197:63,134:63:2234:134:4735:-362.117,0,-142.019	0/1:111:18,92:18:642:92:3188:-237.983,0,-24.6952	0/1:32:9,23:9:308:23:810:-63.0712,0,-18.4176	0/1:85:54,31:54:1923:31:1089:-72.0519,0,-147.736	0/1:68:16,52:16:567:52:1783:-132.01,0,-30.8863	0/1:14:8,6:8:277:6:216:-15.403,0,-21.0507	0/1:174:57,117:57:2024:117:4164:-318.8,0,-129.983	0/1:82:23,59:23:786:59:2099:-162.869,0,-46.366	0/1:151:68,81:68:2364:81:2879:-212.456,0,-166.819	0/1:181:60,121:60:2126:121:4339:-332.122,0,-137.035	0/1:109:12,96:12:425:96:3345:-251.813,0,-5.11767	0/1:110:28,81:28:980:81:2885:-224.166,0,-55.3039	1/1:5:0,5:0:0:5:176:-15.3125,-1.50515,0	0/1:105:43,61:43:1525:61:2158:-161.187,0,-105.855	0/1:118:54,64:54:1907:64:2266:-166.793,0,-136.252	0/1:167:78,89:78:2775:89:3175:-232.502,0,-198.83	0/1:93:22,71:22:779:71:2395:-176.149,0,-42.3776	0/1:73:18,55:18:637:55:1888:-139.029,0,-35.669	0/1:94:33,61:33:1179:61:2097:-151.142,0,-78.1193	0/1:149:40,109:40:1402:109:3746:-274.808,0,-81.52	0/1:82:37,45:37:1312:45:1608:-118.842,0,-93.6775	0/1:101:45,56:45:1610:56:2012:-149.601,0,-114.786	0/1:111:46,65:46:1647:65:2336:-175.582,0,-115.048	0/1:46:12,34:12:423:34:1172:-86.6399,0,-24.536	0/1:105:28,77:28:986:77:2674:-196.336,0,-56.5945	0/1:73:20,53:20:705:53:1814:-131.965,0,-41.7987	0/1:87:22,65:22:769:65:2311:-179.759,0,-43.3275	0/1:146:50,96:50:1783:96:3424:-260.824,0,-116.773
chr03	1019028	.	G	T	80587.8	PASS	AB=0.535181;ABP=108.894;AC=96;AF=0.510638;AN=188;AO=5281;CIGAR=1X;DP=9859;DPB=9859;DPRA=0;EPP=11470.6;EPPR=9924.47;GTI=4;LEN=1;MEANALT=1.07447;MQM=47.2376;MQMR=51.1821;NS=94;NUMALT=1;ODDS=1.24707;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=178554;QR=163509;RO=4569;RPL=5281;RPP=11470.6;RPPR=9924.47;RPR=0;RUN=1;SAF=0;SAP=11470.6;SAR=5281;SRF=0;SRP=9924.47;SRR=4569;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:34:21,13:21:756:13:430:-28.5611,0,-51.1087	0/1:112:65,47:65:2332:47:1597:-108.968,0,-157.245	0/1:88:51,37:51:1821:37:1218:-82.5593,0,-125.122	0/1:166:51,114:51:1824:114:3902:-297.4,0,-114.047	0/1:68:24,44:24:860:44:1488:-110.084,0,-57.1071	0/1:49:16,33:16:572:33:1115:-85.3611,0,-37.0548	0/1:132:56,76:56:1996:76:2579:-189.34,0,-140.172	0/1:110:79,31:79:2844:31:1058:-61.1386,0,-204.777	0/1:150:59,91:59:2112:91:3108:-232.446,0,-144.994	0/1:129:44,84:44:1576:84:2844:-214.304,0,-103.217	0/1:66:25,41:25:900:41:1381:-103.771,0,-61.4306	0/1:110:53,57:53:1883:57:1968:-142.984,0,-136.591	0/1:98:40,58:40:1432:58:1996:-149.228,0,-99.6238	0/1:79:22,57:22:788:57:1990:-153.87,0,-47.4528	0/1:87:41,46:41:1467:46:1592:-114.533,0,-106.109	0/1:69:39,30:39:1391:30:1035:-72.0519,0,-104.694	0/1:69:25,44:25:900:44:1497:-112.803,0,-60.3044	0/1:80:37,43:37:1332:43:1459:-105.377,0,-95.9586	0/1:46:18,28:18:639:28:955:-71.4392,0,-43.9905	0/1:215:46,167:46:1618:167:5638:-438.688,0,-80.9874	0/1:179:76,103:76:2708:103:3420:-251.827,0,-189.988	0/1:98:71,27:71:2536:27:933:-54.2136,0,-176.113	0/1:84:18,66:18:648:66:2172:-168.964,0,-33.3507	0/1:162:68,94:68:2440:94:3211:-236.812,0,-170.978	0/1:73:50,23:50:1788:23:786:-48.6897,0,-127.077	0/1:253:159,94:159:5704:94:3080:-198.001,0,-394.225	0/1:267:99,168:99:3522:168:5651:-422.067,0,-236.322	0/1:42:16,26:16:572:26:913:-68.2918,0,-38.2988	0/1:222:120,102:120:4304:102:3421:-239.133,0,-292.025	0/1:150:56,93:56:2004:93:3139:-234.571,0,-134.211	0/1:111:47,64:47:1677:64:2132:-154.787,0,-117.799	0/1:4:1,3:1:36:3:93:-7.42549,0,-2.04204	0/1:9:2,7:2:72:7:252:-20.1607,0,-4.12745	0/1:4:2,2:2:72:2:72:-5.5854,0,-5.6326	0/1:5:1,4:1:36:4:144:-11.7166,0,-2.09312	0/1:10:8,2:8:288:2:72:-3.77922,0,-21.2175	0/1:278:124,154:124:4439:154:5205:-381.325,0,-315.886	0/1:135:58,77:58:2080:77:2543:-186.295,0,-146.786	0/1:79:44,35:44:1576:35:1217:-85.3364,0,-108.752	1/1:4:0,4:0:0:4:140:-12.8663,-1.20412,0	0/1:645:336,307:336:12043:307:10363:-730.779,0,-823.7	0/1:50:39,11:39:1404:11:347:-16.3128,0,-103.352	0/1:125:72,53:72:2588:53:1771:-120.868,0,-183.97	0/1:84:50,34:50:1787:34:1212:-82.6163,0,-122.882	0/1:68:29,38:29:1044:38:1258:-92.2118,0,-73.0071	0/1:101:63,38:63:2260:38:1262:-81.9084,0,-150.981	0/1:133:32,101:32:1152:101:3376:-259.545,0,-63.9355	0/1:144:40,103:40:1432:103:3415:-261.721,0,-85.3439	0/1:152:37,115:37:1328:115:3682:-282.177,0,-74.0657	0/1:111:64,47:64:2304:47:1594:-107.966,0,-154.091	0/1:138:44,94:44:1576:94:3150:-239.128,0,-98.4766	1/1:6:0,6:0:0:6:204:-18.3792,-1.80618,0	0/1:222:112,110:112:3974:110:3615:-255.427,0,-265.07	0/1:54:8,46:8:280:46:1527:-120.633,0,-9.28368	0/1:40:21,19:21:752:19:642:-45.6958,0,-55.8951	0/1:114:76,38:76:2724:38:1302:-82.3819,0,-189.639	0/1:65:16,49:16:572:49:1672:-129.638,0,-31.3858	0/1:8:4,4:4:144:4:121:-8.73897,0,-9.38597	0/1:9:7,2:7:252:2:53:-2.31469,0,-18.8714	0/1:80:54,26:54:1936:26:921:-58.1991,0,-139.883	0/1:147:59,88:59:2095:88:3083:-228.932,0,-144.208	0/1:7:2,5:2:72:5:165:-12.9497,0,-4.72951	0/1:88:44,44:44:1565:44:1466:-104.933,0,-104.697	0/1:227:86,141:86:3080:141:4705:-350.497,0,-206.792	0/1:55:44,11:44:1568:11:358:-14.7078,0,-116.061	0/1:77:22,55:22:788:55:1854:-142.16,0,-47.9591	0/1:186:62,124:62:2224:124:4130:-310.044,0,-144.432	0/1:109:71,38:71:2552:38:1235:-77.0919,0,-177.831	0/1:30:8,22:8:288:22:765:-59.7125,0,-17.2365	0/1:83:54,29:54:1940:29:983:-63.1831,0,-149.868	0/1:69:45,24:45:1604:24:794:-50.1516,0,-112.437	0/1:13:8,5:8:284:5:157:-10.4437,0,-21.99	0/1:167:57,110:57:2052:110:3764:-285.438,0,-134.608	0/1:83:22,61:22:788:61:2043:-157.195,0,-46.2578	0/1:145:68,77:68:2428:77:2606:-189.76,0,-173.53	0/1:170:60,110:60:2148:110:3791:-286.369,0,-142.283	0/1:106:70,36:70:2496:36:1144:-70.2338,0,-173.653	0/1:104:27,77:27:972:77:2653:-205.744,0,-56.1373	0/1:5:3,2:3:108:2:72:-5.28437,0,-7.52946	0/1:103:44,59:44:1561:59:1950:-143.084,0,-109.739	0/1:115:55,60:55:1968:60:2014:-144.442,0,-142.629	0/1:167:78,89:78:2800:89:3057:-221.849,0,-201.064	0/1:90:64,26:64:2291:26:922:-55.5407,0,-160.699	0/1:71:49,22:49:1751:22:776:-47.8295,0,-124.183	0/1:93:69,24:69:2472:24:848:-48.0132,0,-180.119	0/1:142:100,42:100:3563:42:1488:-89.194,0,-253.583	0/1:79:37,42:37:1328:42:1421:-101.975,0,-96.0222	0/1:99:44,55:44:1580:55:1953:-144.945,0,-112.69	0/1:108:46,62:46:1652:62:2150:-159.999,0,-116.401	0/1:45:31,14:31:1098:14:481:-29.7792,0,-78.821	0/1:106:77,29:77:2755:29:1032:-60.6376,0,-198.104	0/1:71:55,16:55:1980:16:538:-26.9689,0,-143.928	0/1:81:22,59:22:777:59:2006:-155.036,0,-45.7819	0/1:143:50,93:50:1784:93:3217:-243.169,0,-117.413
chr03	1947689	.	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chr03	2439353	.	T	C	11847.5	PASS	AB=0.517216;ABP=6.52443;AC=34;AF=0.180851;AN=188;AO=731;CIGAR=1X;DP=4065;DPB=4065;DPRA=1.12798;EPP=1590.36;EPPR=7242.7;GTI=1;LEN=1;MEANALT=1;MQM=59.8837;MQMR=59.961;NS=94;NUMALT=1;ODDS=0.108065;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=25794;QR=118426;RO=3334;RPL=0;RPP=1590.36;RPPR=7242.7;RPR=731;RUN=1;SAF=0;SAP=1590.36;SAR=731;SRF=0;SRP=7242.7;SRR=3334;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:19:8,11:8:284:11:388:-29.5378,0,-20.1838	0/1:44:21,23:21:748:23:824:-61.238,0,-54.4	0/1:27:15,12:15:532:12:419:-29.9149,0,-40.0853	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.408	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:68:68,0:68:2403:0:0:0,-20.47,-216.527	0/1:72:30,42:30:1055:42:1457:-109.745,0,-73.5859	0/0:30:30,0:30:1056:0:0:0,-9.0309,-95.3509	0/0:40:40,0:40:1398:0:0:0,-12.0412,-126.116	0/0:28:28,0:28:996:0:0:0,-8.42884,-89.9549	0/1:17:3,14:3:108:14:488:-39.132,0,-4.95766	0/0:17:17,0:17:600:0:0:0,-5.11751,-54.3292	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:20:20,0:20:707:0:0:0,-6.0206,-63.9369	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/0:20:20,0:20:703:0:0:0,-6.0206,-63.5935	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:100:100,0:100:3553:0:0:0,-30.103,-319.974	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/1:65:27,38:27:964:38:1346:-101.872,0,-67.5099	0/0:18:18,0:18:626:0:0:0,-5.41854,-56.6633	0/0:37:37,0:37:1315:0:0:0,-11.1381,-118.651	0/1:19:12,7:12:424:7:248:-16.9446,0,-32.7768	0/1:177:85,92:85:3027:92:3214:-236.198,0,-219.378	0/0:55:55,0:55:1929:0:0:0,-16.5566,-173.885	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:104:57,47:57:2040:47:1628:-115.496,0,-152.295	0/0:67:67,0:67:2374:0:0:0,-20.169,-213.918	0/0:58:58,0:58:2072:0:0:0,-17.4597,-186.751	0/0:60:57,3:57:2036:3:108:0,-7.98663,-173.437	0/0:104:104,0:104:3716:0:0:0,-31.3071,-334.642	0/0:135:135,0:135:4746:0:0:0,-40.639,-427.304	0/0:186:185,1:185:6590:1:36:0,-52.3933,-589.571	0/1:6:1,5:1:36:5:176:-14.3788,0,-1.79209	0/0:76:76,0:76:2724:0:0:0,-22.8783,-245.395	0/0:85:85,0:85:3035:0:0:0,-25.5875,-273.38	0/1:29:16,13:16:576:13:468:-33.7298,0,-43.4451	0/0:63:63,0:63:2199:0:0:0,-18.9649,-198.174	0/1:54:30,24:30:1062:24:852:-60.7448,0,-79.6344	0/1:20:11,9:11:392:9:324:-23.4853,0,-29.5995	0/1:52:34,18:34:1208:18:644:-42.637,0,-93.3644	0/1:17:7,10:7:248:10:352:-26.9003,0,-17.5467	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:33:23,10:23:807:10:356:-22.4473,0,-63.0152	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:56:56,0:56:1991:0:0:0,-16.8577,-179.464	0/0:46:46,0:46:1631:0:0:0,-13.8474,-147.078	0/1:73:30,43:30:1076:43:1528:-115.83,0,-75.1777	0/0:91:91,0:91:3236:0:0:0,-27.3937,-291.461	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:50:25,25:25:881:25:892:-65.5482,0,-64.5367	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:36:12,24:12:432:24:836:-64.7204,0,-28.3841	0/0:28:28,0:28:996:0:0:0,-8.42884,-89.9493	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	0/1:6:2,4:2:72:4:144:-11.5065,0,-5.03054	0/0:38:38,0:38:1355:0:0:0,-11.4391,-122.25	0/0:58:58,0:58:2063:0:0:0,-17.4597,-185.941	0/0:4:4,0:4:135:0:0:0,-1.20412,-12.4825	0/1:87:42,45:42:1496:45:1612:-119.179,0,-108.744	0/0:94:94,0:94:3356:0:0:0,-28.2968,-302.257	0/1:26:8,18:8:273:18:640:-50.0575,0,-17.0734	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.355	0/1:59:30,29:30:1072:29:1023:-74.6212,0,-79.0317	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/0:24:24,0:24:841:0:0:0,-7.22472,-76.0064	0/1:41:24,17:24:864:17:600:-41.987,0,-65.7403	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:42:42,0:42:1484:0:0:0,-12.6433,-133.855	0/0:7:7,0:7:235:0:0:0,-2.10721,-21.4779	0/0:86:86,0:86:3054:0:0:0,-25.8886,-275.09	0/0:74:74,0:74:2609:0:0:0,-22.2762,-235.058	0/1:62:31,31:31:1116:31:1108:-81.3671,0,-82.0878	0/0:28:28,0:28:991:0:0:0,-8.42884,-89.5035	0/1:6:5,1:5:171:1:36:-1.79209,0,-13.9193	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/0:43:43,0:43:1501:0:0:0,-12.9443,-135.381	0/0:69:69,0:69:2448:0:0:0,-20.7711,-220.576	0/1:40:18,22:18:630:22:784:-58.8419,0,-44.9834	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	1/1:19:1,18:1:36:18:625:-52.9742,-2.1213,0	0/1:50:15,35:15:532:35:1219:-94.8477,0,-33.1616	0/0:22:22,0:22:767:0:0:0,-6.62266,-69.3494	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/0:18:18,0:18:636:0:0:0,-5.41854,-57.568	0/0:44:41,3:41:1460:3:104:0,-3.54251,-121.993	0/1:40:25,15:25:896:15:532:-36.1719,0,-68.9192	0/1:10:2,8:2:72:8:279:-22.4372,0,-3.82642	0/0:39:39,0:39:1375:0:0:0,-11.7402,-124.048	0/0:18:18,0:18:635:0:0:0,-5.41854,-57.477
chr03	2785012	.	G	T	112487	PASS	AB=0.441849;ABP=123.727;AC=153;AF=0.81383;AN=188;AO=5573;CIGAR=1X;DP=7883;DPB=7883;DPRA=0;EPP=12104.6;EPPR=5019.11;GTI=8;LEN=1;MEANALT=1;MQM=54.7244;MQMR=59.6745;NS=94;NUMALT=1;ODDS=1.16422;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=196771;QR=82668;RO=2310;RPL=5573;RPP=12104.6;RPPR=5019.11;RPR=0;RUN=1;SAF=0;SAP=12104.6;SAR=5573;SRF=0;SRP=5019.11;SRR=2310;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:56:42,14:42:1483:14:477:-26.3577,0,-116.899	0/1:175:112,63:112:4005:63:2194:-144.853,0,-307.832	0/1:122:64,58:64:2300:58:2064:-149.121,0,-170.535	1/1:71:0,71:0:0:71:2528:-227.33,-21.3731,0	1/1:130:0,130:0:0:130:4537:-406.69,-39.1339,0	1/1:51:0,51:0:0:51:1786:-160.654,-15.3525,0	1/1:44:0,44:0:0:44:1557:-140.267,-13.2453,0	0/1:184:107,77:107:3828:77:2699:-187.235,0,-289.302	1/1:77:1,76:1:36:76:2681:-237.674,-19.581,0	1/1:41:0,41:0:0:41:1429:-127.519,-12.3422,0	1/1:21:0,21:0:0:21:756:-68.2299,-6.32163,0	0/1:70:42,28:42:1504:28:1004:-69.4043,0,-114.563	1/1:37:0,37:0:0:37:1313:-118.351,-11.1381,0	1/1:30:0,30:0:0:30:1076:-96.8695,-9.0309,0	1/1:49:0,49:0:0:49:1764:-158.927,-14.7505,0	1/1:12:0,12:0:0:12:432:-38.4125,-3.61236,0	1/1:31:0,31:0:0:31:1116:-100.539,-9.33193,0	1/1:36:0,36:0:0:36:1284:-114.563,-10.8371,0	1/1:16:0,16:0:0:16:571:-51.5324,-4.81648,0	1/1:52:0,52:0:0:52:1856:-166.714,-15.6536,0	1/1:94:0,94:0:0:94:3283:-294.661,-28.2968,0	0/1:198:120,78:120:4296:78:2753:-188.182,0,-327.202	1/1:36:0,36:0:0:36:1269:-114.288,-10.8371,0	1/1:126:0,126:0:0:126:4359:-391.9,-37.9298,0	0/1:124:45,79:45:1612:79:2805:-214.702,0,-107.899	0/1:279:228,51:228:8152:51:1812:-78.8878,0,-648.728	1/1:141:1,140:1:36:140:4931:-438.503,-38.847,0	1/1:16:0,16:0:0:16:572:-51.6165,-4.81648,0	0/1:274:164,110:164:5849:110:3870:-265.735,0,-444.033	1/1:132:7,125:7:248:125:4404:-372.614,-17.0718,0	1/1:78:0,78:0:0:78:2754:-247.006,-23.4803,0	0/1:43:10,33:10:352:33:1176:-92.7541,0,-18.9431	1/1:34:0,34:0:0:34:1171:-105.532,-10.235,0	1/1:81:0,81:0:0:81:2866:-257.386,-24.3834,0	1/1:93:0,93:0:0:93:3297:-296.436,-27.9958,0	0/1:17:2,15:2:72:15:536:-43.4089,0,-1.71921	1/1:71:0,71:0:0:71:2536:-228.239,-21.3731,0	1/1:144:1,143:1:36:143:5039:-448.416,-39.75,0	0/1:51:33,18:33:1184:18:629:-41.3998,0,-91.3996	1/1:85:0,85:0:0:85:2997:-268.617,-25.5876,0	0/1:102:60,42:60:2152:42:1462:-100.991,0,-163.218	0/1:26:16,10:16:576:10:360:-24.8711,0,-44.3482	0/1:178:99,79:99:3552:79:2782:-196.193,0,-265.597	0/1:94:45,49:45:1616:49:1748:-129.082,0,-117.429	1/1:38:0,38:0:0:38:1364:-122.962,-11.4391,0	0/1:153:92,61:92:3296:61:2153:-146.711,0,-250.631	1/1:73:0,73:0:0:73:2529:-227.069,-21.9752,0	1/1:78:0,78:0:0:78:2757:-247.549,-23.4803,0	1/1:70:0,70:0:0:70:2458:-221.148,-21.0721,0	0/1:164:70,94:70:2516:94:3326:-249.866,0,-177.313	1/1:27:0,27:0:0:27:948:-85.6134,-8.12781,0	1/1:96:0,96:0:0:96:3343:-300.58,-28.8989,0	0/1:120:61,59:61:2192:59:2058:-149.091,0,-161.355	1/1:10:0,10:0:0:10:356:-32.3698,-3.0103,0	1/1:74:0,74:0:0:74:2640:-237.362,-22.2762,0	0/1:179:75,104:75:2670:104:3642:-273.024,0,-186.653	1/1:15:0,15:0:0:15:513:-46.4465,-4.51545,0	0/1:29:5,24:5:180:24:848:-67.8887,0,-7.82219	0/1:27:17,10:17:612:10:352:-23.8793,0,-47.2856	1/1:27:1,26:1:36:26:886:-76.2972,-4.52954,0	1/1:59:1,58:1:36:58:2076:-183.209,-14.1625,0	1/1:33:0,33:0:0:33:1176:-105.9,-9.93399,0	0/1:298:113,185:113:4029:185:6562:-500.126,0,-273.086	1/1:156:0,156:0:0:156:5479:-491.948,-46.9607,0	0/1:106:44,62:44:1580:62:2212:-166.829,0,-110.578	1/1:54:0,54:0:0:54:1871:-168.402,-16.2556,0	1/1:161:2,159:2:72:159:5611:-497.47,-41.6291,0	0/1:188:113,75:113:4029:75:2680:-184.539,0,-306.176	1/1:4:0,4:0:0:4:144:-13.2947,-1.20412,0	1/1:41:2,39:2:68:39:1396:-119.146,-5.88452,0	0/1:101:65,36:65:2336:36:1292:-85.9268,0,-180.086	1/1:9:0,9:0:0:9:324:-29.4846,-2.70927,0	1/1:31:0,31:0:0:31:1085:-97.6913,-9.33193,0	1/1:51:0,51:0:0:51:1812:-163.19,-15.3525,0	1/1:55:0,55:0:0:55:1910:-171.086,-16.5567,0	1/1:132:0,132:0:0:132:4661:-419.242,-39.736,0	0/1:131:56,75:56:2008:75:2673:-200.951,0,-141.547	1/1:19:0,19:0:0:19:684:-61.7187,-5.71957,0	0/1:23:13,10:13:460:10:356:-25.4258,0,-34.8117	1/1:58:0,58:0:0:58:2040:-182.851,-17.4597,0	1/1:134:0,134:0:0:134:4761:-427.693,-40.338,0	1/1:258:0,258:0:0:258:9078:-815.274,-77.6657,0	0/1:81:56,25:56:2012:25:896:-56.1363,0,-156.89	0/1:68:41,27:41:1476:27:968:-66.8169,0,-112.664	0/1:127:77,50:77:2755:50:1788:-122.588,0,-209.951	0/1:145:79,66:79:2828:66:2345:-167.355,0,-211.083	1/1:21:0,21:0:0:21:744:-67.2199,-6.32163,0	1/1:25:0,25:0:0:25:892:-80.3141,-7.52575,0	1/1:17:0,17:0:0:17:604:-54.5201,-5.11751,0	0/1:19:13,6:13:468:6:212:-13.6805,0,-36.7354	0/1:80:51,29:51:1820:29:1017:-67.5117,0,-139.998	0/1:78:64,14:64:2300:14:504:-22.1848,0,-183.778	1/1:65:0,65:0:0:65:2324:-209.053,-19.567,0	1/1:53:0,53:0:0:53:1886:-169.85,-15.9546,0
chr03	3806214	.	CCTAC	CC	51353.8	PASS	AB=0.421263;ABP=433.524;AC=26;AF=0.138298;AN=188;AO=3404;CIGAR=1M3D1M;DP=34951;DPB=32910;DPRA=1.07489;EPP=7394.7;EPPR=68213.3;GTI=1;LEN=3;MEANALT=2.05263;MQM=59.9965;MQMR=59.9903;NS=94;NUMALT=1;ODDS=2.61619;PAIRED=0;PAIREDR=0;PAO=2.5;PQA=88;PQR=256;PRO=7.5;QA=108090;QR=1069675;RO=31424;RPL=2964;RPP=4066.91;RPPR=26381.7;RPR=440;RUN=1;SAF=2964;SAP=4066.91;SAR=440;SRF=25482;SRP=26387.1;SRR=5942;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:23,20:23:792:20:643:-44.8893,0,-58.307	0/1:219:125,94:125:4255:94:3017:-205.84,0,-317.222	0/1:122:77,44:77:2620:44:1367:-86.5589,0,-199.309	0/0:338:335,0:335:11570:0:0:0,-100.845,-1040.87	0/0:168:167,0:167:5697:0:0:0,-50.272,-512.516	0/0:103:103,0:103:3540:0:0:0,-31.0061,-318.818	0/0:263:261,0:261:8973:0:0:0,-78.5688,-807.241	0/0:336:334,0:334:11352:0:0:0,-100.544,-1021.34	0/0:174:173,0:173:5906:0:0:0,-52.0782,-531.41	0/0:215:213,0:213:7345:0:0:0,-64.1194,-660.794	0/0:891:887,0:887:29874:0:0:0,-267.014,-2687.74	0/1:75:40,35:40:1339:35:1022:-69.6777,0,-98.2275	0/1:70:35,34:35:1154:34:1027:-71.581,0,-83.0241	0/0:165:165,0:165:5591:0:0:0,-49.6699,-503.347	0/0:168:168,0:168:5756:0:0:0,-50.573,-518.187	0/0:115:115,0:115:3966:0:0:0,-34.6184,-357.146	0/0:121:120,0:120:3992:0:0:0,-36.1236,-359.134	0/0:80:79,0:79:2628:0:0:0,-23.7814,-236.412	0/1:218:120,98:120:4046:98:3026:-206.962,0,-298.724	0/0:410:409,0:409:14006:0:0:0,-123.121,-1260.04	0/0:370:370,0:370:12638:0:0:0,-111.381,-1137.33	0/0:262:261,0:261:8907:0:0:0,-78.5688,-801.306	0/0:345:343,0:343:11696:0:0:0,-103.253,-1052.22	0/0:257:257,0:257:8736:0:0:0,-77.3647,-786.283	0/0:237:237,0:237:8204:0:0:0,-71.3441,-738.411	0/1:614:339,273:339:11442:273:9016:-626.895,0,-845.147	0/0:540:537,0:537:18530:0:0:0,-161.653,-1667.03	0/0:61:61,0:61:2134:0:0:0,-18.3628,-192.329	0/0:493:492,0:492:17009:0:0:0,-148.107,-1530.19	0/0:372:359,8:359:12201:8:272:0,-86.0104,-1073.21	0/0:315:315,0:315:10789:0:0:0,-94.8244,-970.979	0/1:649:391,256:391:13318:256:8199:-542.896,0,-1003.4	0/0:1066:1058,6:1058:36017:6:198:0,-302.445,-3222.52	0/0:1044:1035,0:1035:34889:0:0:0,-311.566,-3138.83	0/0:1407:1403,0:1403:47414:0:0:0,-422.345,-4265.67	0/0:1125:1123,1:1123:38074:1:32:0,-335.498,-3422.51	0/0:394:391,0:391:13417:0:0:0,-117.703,-1207.06	0/0:408:406,0:406:13693:0:0:0,-122.218,-1231.89	0/1:500:289,211:289:9707:211:6535:-437.796,0,-723.145	0/0:728:726,0:726:24687:0:0:0,-218.548,-2221.01	0/1:166:129,36:129:4468:36:1107:-49.8826,0,-352.276	0/1:254:145,108:145:4964:108:3280:-218.92,0,-370.413	0/0:373:372,0:372:12784:0:0:0,-111.983,-1150.09	0/0:109:109,0:109:3734:0:0:0,-32.8123,-336.273	0/0:117:117,0:117:3948:0:0:0,-35.2205,-355.531	0/0:295:294,0:294:10198:0:0:0,-88.5028,-917.583	0/0:193:193,0:193:6572:0:0:0,-58.0988,-591.595	0/0:415:410,1:410:14009:1:32:0,-120.844,-1257.45	0/0:274:273,0:273:9378:0:0:0,-82.1812,-843.674	0/1:242:129,113:129:4425:113:3783:-267.829,0,-325.588	0/0:323:323,0:323:11137:0:0:0,-97.2327,-1002.28	0/0:1227:1220,2:1220:41772:2:72:0,-361.356,-3750.96	0/1:178:98,79:98:3290:79:2569:-177.945,0,-242.546	0/0:125:125,0:125:4302:0:0:0,-37.6287,-387.371	0/0:1047:1041,1:1041:35170:1:32:0,-310.799,-3161.25	0/1:252:153,99:153:5162:99:3109:-204.122,0,-388.831	0/1:141:84,57:84:2858:57:1880:-127.023,0,-215.018	0/1:1001:598,402:598:20381:402:12999:-868.463,0,-1532.55	0/0:960:956,0:956:32525:0:0:0,-287.785,-2926.13	0/0:216:215,0:215:7295:0:0:0,-64.7214,-656.283	0/0:191:189,1:189:6441:1:27:0,-54.7359,-577.144	0/0:862:860,0:860:29393:0:0:0,-258.886,-2644.41	0/0:295:294,0:294:10055:0:0:0,-88.5028,-904.673	0/0:335:329,6:329:11110:6:207:0,-81.8782,-980.905	0/0:194:187,7:187:6368:7:212:0,-39.0215,-553.864	0/0:148:147,0:147:4974:0:0:0,-44.2514,-447.473	0/0:403:402,0:402:13742:0:0:0,-121.014,-1236.29	0/1:231:92,139:92:3128:139:4541:-339.333,0,-212.216	0/0:676:675,0:675:22791:0:0:0,-203.195,-2050.22	0/0:91:91,0:91:3096:0:0:0,-27.3937,-278.873	0/1:133:73,60:73:2459:60:1957:-136.363,0,-181.531	0/0:1009:1005,0:1005:33920:0:0:0,-302.535,-3051.71	0/0:110:107,1:107:3636:1:32:0,-29.6152,-324.29	0/0:75:74,0:74:2526:0:0:0,-22.2762,-227.237	0/0:570:566,0:566:19306:0:0:0,-170.383,-1736.86	0/0:327:323,0:323:11119:0:0:0,-97.2327,-1000.3	0/1:97:52,45:52:1784:45:1422:-98.7006,0,-131.282	0/1:116:79,37:79:2703:37:1157:-69.4906,0,-208.601	0/0:1421:1421,0:1421:48337:0:0:0,-427.764,-4349.02	0/0:213:213,0:213:7342:0:0:0,-64.1194,-660.863	0/0:106:105,0:105:3581:0:0:0,-31.6081,-322.148	0/0:567:564,1:564:19417:1:32:0,-167.193,-1744	0/0:195:195,0:195:6587:0:0:0,-58.7008,-592.953	0/1:122:66,56:66:2235:56:1833:-128.52,0,-164.688	0/1:158:95,63:95:3160:63:1997:-132.431,0,-237.071	0/1:258:143,115:143:4799:115:3744:-259.508,0,-354.424	0/0:42:41,0:41:1410:0:0:0,-12.3422,-126.944	0/0:96:95,0:95:3194:0:0:0,-28.5978,-287.336	0/0:90:90,0:90:3059:0:0:0,-27.0927,-275.549	0/1:816:465,350:465:15796:350:10734:-720.479,0,-1175.8	0/1:1202:718,476:718:24150:476:14731:-965.988,0,-1813.29	0/1:118:48,68:48:1676:68:2226:-165.325,0,-115.849	0/0:97:96,1:96:3340:1:21:0,-27.1,-298.727	0/0:198:198,0:198:6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chr03	4327357	.	A	G	179092	PASS	AB=0.545191;ABP=45.7951;AC=159;AF=0.845745;AN=188;AO=8199;CIGAR=1X;DP=9309;DPB=9309;DPRA=0;EPP=17806.9;EPPR=2402.49;GTI=1;LEN=1;MEANALT=1.05319;MQM=59.9929;MQMR=59.9964;NS=94;NUMALT=1;ODDS=4.60963;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=289705;QR=39297;RO=1105;RPL=6;RPP=17754.8;RPPR=2402.49;RPR=8193;RUN=1;SAF=6;SAP=17754.8;SAR=8193;SRF=0;SRP=2402.49;SRR=1105;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:21,9:21:734:9:324:-20.475,0,-57.3495	0/1:48:27,21:27:963:21:748:-53.1959,0,-72.5365	0/1:125:54,71:54:1923:71:2519:-189.332,0,-135.718	1/1:228:0,228:0:0:228:8043:-723.897,-68.6348,0	1/1:37:2,35:2:72:35:1256:-106.509,-4.30139,0	1/1:29:0,29:0:0:29:1025:-92.5607,-8.72987,0	1/1:116:1,114:1:36:114:4080:-363.786,-31.38,0	1/1:118:0,118:0:0:118:4160:-374.581,-35.5215,0	1/1:136:0,136:0:0:136:4788:-431.077,-40.9401,0	1/1:50:0,49:0:0:49:1729:-155.533,-14.7505,0	1/1:61:0,61:0:0:61:2108:-189.984,-18.3628,0	0/1:98:43,55:43:1519:55:1935:-144.922,0,-107.501	0/1:71:37,34:37:1307:34:1196:-86.5695,0,-96.5576	1/1:99:0,99:0:0:99:3389:-305.222,-29.802,0	1/1:79:0,79:0:0:79:2772:-249.719,-23.7814,0	1/1:80:0,80:0:0:80:2800:-252.239,-24.0824,0	1/1:48:0,48:0:0:48:1690:-152.383,-14.4494,0	1/1:40:0,40:0:0:40:1420:-128.097,-12.0412,0	0/1:45:20,25:20:693:25:874:-65.4289,0,-49.1433	1/1:159:0,159:0:0:159:5567:-501.146,-47.8638,0	1/1:131:0,131:0:0:131:4649:-418.573,-39.4349,0	1/1:166:1,165:1:36:165:5855:-523.465,-46.3727,0	1/1:150:0,150:0:0:150:5273:-474.707,-45.1545,0	1/1:86:1,85:1:36:85:3010:-267.533,-22.2903,0	1/1:129:0,129:0:0:129:4582:-412.545,-38.8329,0	0/1:255:98,157:98:3475:157:5581:-425.652,0,-236.199	1/1:324:0,324:0:0:324:11491:-1034.07,-97.5337,0	1/1:48:0,48:0:0:48:1686:-152.025,-14.4494,0	1/1:337:0,337:0:0:337:11888:-1069.79,-101.447,0	1/1:130:3,127:3:108:127:4500:-395.094,-29.0587,0	1/1:81:0,81:0:0:81:2863:-257.905,-24.3834,0	0/1:6:4,2:4:144:2:68:-4.65153,0,-11.5074	1/1:37:0,37:0:0:37:1319:-119.011,-11.1381,0	1/1:14:0,14:0:0:14:487:-44.1592,-4.21442,0	1/1:15:0,15:0:0:15:530:-48.032,-4.51545,0	0/1:29:11,18:11:381:18:636:-48.8382,0,-25.8908	1/1:246:0,246:0:0:246:8689:-782.003,-74.0534,0	1/1:71:0,71:0:0:71:2498:-225.071,-21.3731,0	0/1:49:19,30:19:680:30:1076:-82.4024,0,-46.7787	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:119:46,73:46:1652:73:2615:-199.775,0,-113.146	0/1:32:13,19:13:437:19:676:-51.535,0,-30.0179	1/1:162:0,162:0:0:162:5709:-513.931,-48.7669,0	1/1:57:0,57:0:0:57:2014:-181.532,-17.1587,0	1/1:67:0,67:0:0:67:2307:-207.885,-20.169,0	1/1:179:1,178:1:36:178:6315:-564.845,-50.2861,0	1/1:102:0,102:0:0:102:3601:-324.297,-30.7051,0	1/1:224:0,224:0:0:224:7976:-717.866,-67.4307,0	1/1:152:0,152:0:0:152:5340:-480.737,-45.7566,0	0/1:134:62,72:62:2193:72:2523:-186.983,0,-157.296	1/1:197:0,197:0:0:197:6964:-626.828,-59.3029,0	1/1:14:0,14:0:0:14:476:-43.1619,-4.21442,0	0/1:127:62,65:62:2213:65:2285:-167.678,0,-161.202	1/1:72:0,72:0:0:72:2530:-227.95,-21.6742,0	1/1:19:0,19:0:0:19:668:-60.4457,-5.71957,0	0/1:133:67,66:67:2385:66:2355:-172.171,0,-174.869	0/1:72:26,46:26:932:46:1585:-121.26,0,-62.5247	0/1:20:12,8:12:428:8:288:-20.2468,0,-32.8382	1/1:59:0,59:0:0:59:2082:-187.647,-17.7608,0	1/1:86:0,86:0:0:86:3045:-274.278,-25.8886,0	0/1:127:61,65:61:2188:65:2300:-169.122,0,-159.049	1/1:21:0,21:0:0:21:733:-66.2897,-6.32163,0	1/1:112:0,112:0:0:112:3996:-359.831,-33.7154,0	1/1:131:0,131:0:0:131:4653:-418.934,-39.4349,0	0/1:51:8,43:8:288:43:1525:-122.189,0,-10.9149	1/1:87:0,87:0:0:87:3081:-277.519,-26.1896,0	1/1:88:0,88:0:0:88:3135:-282.374,-26.4906,0	0/1:42:27,15:27:960:15:540:-36.2933,0,-74.0721	1/1:59:0,59:0:0:59:2088:-188.188,-17.7608,0	1/1:43:0,43:0:0:43:1523:-137.362,-12.9443,0	0/1:34:20,14:20:716:14:500:-35.1012,0,-54.5327	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:213:0,212:0:0:212:7497:-674.418,-63.8184,0	1/1:102:0,102:0:0:102:3628:-326.725,-30.7051,0	1/1:220:0,220:0:0:220:7776:-699.769,-66.2266,0	1/1:208:0,208:0:0:208:7350:-661.553,-62.6142,0	0/1:101:39,61:39:1391:61:2161:-164.293,0,-95.0255	0/1:88:40,48:40:1420:48:1690:-125.894,0,-101.607	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	1/1:96:1,95:1:36:95:3391:-301.808,-25.3006,0	1/1:129:0,129:0:0:129:4535:-408.318,-38.8329,0	1/1:228:0,228:0:0:228:8061:-725.517,-68.6348,0	1/1:78:0,78:0:0:78:2736:-246.483,-23.4803,0	0/1:72:25,47:25:896:47:1643:-126.481,0,-59.2862	0/1:44:23,21:23:806:21:756:-55.1219,0,-59.6129	0/1:136:73,63:73:2607:63:2238:-160.743,0,-193.938	1/1:35:0,35:0:0:35:1239:-111.814,-10.5361,0	1/1:76:0,76:0:0:76:2665:-240.094,-22.8783,0	1/1:84:0,84:0:0:84:2955:-266.184,-25.2865,0	0/1:63:30,33:30:1068:33:1184:-87.9034,0,-77.4672	0/1:183:70,113:70:2508:113:3967:-302.133,0,-170.884	0/1:78:57,21:57:2030:21:752:-44.5259,0,-159.491	1/1:84:0,84:0:0:84:3005:-270.68,-25.2865,0	1/1:107:0,107:0:0:107:3764:-338.958,-32.2102,0
chr03	5422673	.	CA	TG,CG	133740	PASS	AB=0.533602,0.463984;ABP=27.3806,31.0087;AC=157,31;AF=0.835106,0.164894;AN=188;AO=5024,1164;CIGAR=2X,1M1X;DP=6203;DPB=6203;DPRA=0,1.57723;EPP=10912.5,2530.6;EPPR=7.35324;GTI=2;LEN=2,1;MEANALT=1.53191,2.18919;MQM=59.8953,60;MQMR=60;NS=94;NUMALT=2;ODDS=0.136703;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=178116,41583;QR=72;RO=2;RPL=0,0;RPP=10912.5,2530.6;RPPR=7.35324;RPR=5024,1164;RUN=1,1;SAF=5024,1164;SAP=10912.5,2530.6;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:18:0,15,3:0:0:15,3:519,108:-51.3355,-9.17208,-4.65663,-42.5209,0,-41.6178	1/2:177:0,90,86:0:0:90,86:3213,3071:-512.313,-250.37,-223.277,-261.94,0,-236.051	1/2:109:0,57,52:0:0:57,52:1974,1868:-313.163,-152.746,-135.587,-160.771,0,-145.117	1/1:78:0,78,0:0:0:78,0:2736,0:-246.464,-23.4803,0,-246.464,-23.4803,-246.464	1/1:13:0,13,0:0:0:13,0:466,0:-42.2787,-3.91339,0,-42.2787,-3.91339,-42.2787	1/1:13:0,13,0:0:0:13,0:464,0:-42.0975,-3.91339,0,-42.0975,-3.91339,-42.0975	1/1:45:0,45,0:0:0:45,0:1592,0:-143.568,-13.5464,0,-143.568,-13.5464,-143.568	1/2:118:0,56,62:0:0:56,62:2000,2220:-344.458,-181.401,-164.543,-163.415,0,-144.751	1/1:21:0,21,0:0:0:21,0:752,0:-68.0065,-6.32163,0,-68.0065,-6.32163,-68.0065	1/1:82:0,82,0:0:0:82,0:2927,0:-263.653,-24.6845,0,-263.653,-24.6845,-263.653	1/1:100:0,100,0:0:0:100,0:3564,0:-320.969,-30.103,0,-320.969,-30.103,-320.969	1/2:56:0,30,26:0:0:30,26:1056,923:-161.523,-75.56,-66.5291,-86.3169,0,-78.4901	1/2:85:0,44,41:0:0:44,41:1548,1454:-244.823,-118.812,-105.567,-126.364,0,-114.022	1/1:106:0,106,0:0:0:106,0:3763,0:-338.847,-31.9092,0,-338.847,-31.9092,-338.847	1/1:62:0,62,0:0:0:62,0:2208,0:-198.984,-18.6639,0,-198.984,-18.6639,-198.984	1/1:80:0,80,0:0:0:80,0:2867,0:-258.266,-24.0824,0,-258.266,-24.0824,-258.266	1/1:93:0,93,0:0:0:93,0:3305,0:-297.667,-27.9958,0,-297.667,-27.9958,-297.667	1/1:75:0,75,0:0:0:75,0:2648,0:-238.564,-22.5773,0,-238.564,-22.5773,-238.564	1/2:66:0,36,30:0:0:36,30:1292,1080:-193.87,-88.4823,-77.6453,-105.747,0,-96.716	1/1:84:0,84,0:0:0:84,0:2984,0:-268.78,-25.2865,0,-268.78,-25.2865,-268.78	1/1:84:0,81,3:0:0:81,3:2888,108:-259.795,-24.3834,0,-250.983,-15.2114,-250.08	1/1:28:0,28,0:0:0:28,0:1002,0:-90.4897,-8.42884,0,-90.4897,-8.42884,-90.4897	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:56:0,56,0:0:0:56,0:2001,0:-180.363,-16.8577,0,-180.363,-16.8577,-180.363	1/1:19:0,19,0:0:0:19,0:669,0:-60.5327,-5.71957,0,-60.5327,-5.71957,-60.5327	1/2:122:0,66,56:0:0:66,56:2337,2004:-353.944,-163.776,-143.908,-190.524,0,-173.666	1/1:92:0,92,0:0:0:92,0:3281,0:-295.51,-27.6948,0,-295.51,-27.6948,-295.51	1/1:31:0,31,0:0:0:31,0:1112,0:-100.392,-9.33193,0,-100.392,-9.33193,-100.392	1/1:100:0,99,0:0:0:99,0:3456,0:-310.907,-29.802,0,-310.907,-29.802,-310.907	1/1:244:0,241,2:0:0:241,2:8477,72:-762.581,-72.5482,0,-756.706,-66.6734,-756.104	1/1:39:0,39,0:0:0:39,0:1345,0:-121.342,-11.7402,0,-121.342,-11.7402,-121.342	1/2:6:0,4,2:0:0:4,2:144,72:-17.9843,-6.23466,-5.03054,-12.1095,0,-11.5074	1/1:10:0,10,0:0:0:10,0:347,0:-31.5633,-3.0103,0,-31.5633,-3.0103,-31.5633	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:5:0,1,4:0:0:1,4:36,144:-15.0469,-12.1095,-11.8085,-3.29724,0,-2.09312	1/1:159:0,157,0:0:0:157,0:5552,0:-499.499,-47.2617,0,-499.499,-47.2617,-499.499	1/1:81:0,81,0:0:0:81,0:2880,0:-259.386,-24.3834,0,-259.386,-24.3834,-259.386	1/2:125:0,60,64:0:0:60,64:2133,2300:-361.562,-187.743,-169.682,-173.924,0,-154.658	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/2:91:0,42,49:0:0:42,49:1482,1747:-263.33,-142.763,-130.12,-120.922,0,-106.171	1/2:69:1,32,36:1:36:32,36:1144,1287:-194.976,-101.998,-95.303,-90.3388,0,-82.4392	1/1:50:0,50,0:0:0:50,0:1755,0:-158.23,-15.0515,0,-158.23,-15.0515,-158.23	1/1:60:0,60,0:0:0:60,0:2132,0:-192.146,-18.0618,0,-192.146,-18.0618,-192.146	1/1:48:0,48,0:0:0:48,0:1724,0:-155.446,-14.4494,0,-155.446,-14.4494,-155.446	1/1:28:0,28,0:0:0:28,0:980,0:-88.5102,-8.42884,0,-88.5102,-8.42884,-88.5102	1/1:120:0,120,0:0:0:120,0:4223,0:-380.077,-36.1236,0,-380.077,-36.1236,-380.077	1/1:112:0,112,0:0:0:112,0:3978,0:-358.202,-33.7154,0,-358.202,-33.7154,-358.202	1/1:73:0,73,0:0:0:73,0:2599,0:-234.158,-21.9752,0,-234.158,-21.9752,-234.158	1/2:115:0,64,51:0:0:64,51:2263,1790:-330.338,-146.026,-126.76,-184.664,0,-169.312	1/1:51:0,51,0:0:0:51,0:1824,0:-164.441,-15.3525,0,-164.441,-15.3525,-164.441	1/1:7:0,7,0:0:0:7,0:244,0:-22.2989,-2.10721,0,-22.2989,-2.10721,-22.2989	1/2:97:0,65,32:0:0:65,32:2310,1152:-282.586,-94.3572,-74.7902,-188.587,0,-178.954	1/1:26:0,26,0:0:0:26,0:915,0:-82.6647,-7.82678,0,-82.6647,-7.82678,-82.6647	1/1:25:0,25,0:0:0:25,0:884,0:-79.8428,-7.52575,0,-79.8428,-7.52575,-79.8428	1/2:100:0,63,37:0:0:63,37:2211,1294:-285.556,-105.619,-86.654,-180.287,0,-169.149	1/2:17:0,12,5:0:0:12,5:417,180:-48.9392,-15.0469,-11.4346,-34.2484,0,-32.7433	1/2:7:0,4,3:0:0:4,3:133,108:-19.9175,-9.17208,-7.96796,-11.09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chr03	6266640	.	AGAG	CGAA,AGAA	195017	PASS	AB=0.496371,0.501901;ABP=3.34131,3.10112;AC=157,31;AF=0.835106,0.164894;AN=188;AO=7738,1472;CIGAR=1X2M1X,3M1X;DP=9219;DPB=9221.75;DPRA=0,1.26443;EPP=16805.9,3199.42;EPPR=0;GTI=0;LEN=4,1;MEANALT=1.54255,2.14286;MQM=56.2128,59.6359;MQMR=0;NS=94;NUMALT=2;ODDS=6.30884;PAIRED=0,0;PAIREDR=0;PAO=11,0;PQA=380,0;PQR=0;PRO=0;QA=267906,52291;QR=0;RO=0;RPL=7738,1472;RPP=16805.9,3199.42;RPPR=0;RPR=0,0;RUN=1,1;SAF=7738,1472;SAP=16805.9,3199.42;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:34:0,18,16:0:0:18,16:630,572:-98.231,-46.9937,-41.5751,-51.5911,0,-46.7746	1/2:175:0,105,69:0:0:105,69:3679,2419:-495.877,-196.756,-165.148,-299.111,0,-278.34	1/2:94:0,47,47:0:0:47,47:1657,1637:-268.174,-133.431,-119.282,-135.094,0,-120.945	1/1:180:0,178,2:0:0:178,2:6110,68:-549.031,-53.5833,0,-543.516,-47.7277,-542.914	1/1:84:0,84,0:0:0:84,0:2917,0:-262.596,-25.2865,0,-262.596,-25.2865,-262.596	1/1:78:0,78,0:0:0:78,0:2699,0:-242.884,-23.4803,0,-242.884,-23.4803,-242.884	1/1:110:0,110,0:0:0:110,0:3807,0:-342.283,-33.1133,0,-342.283,-33.1133,-342.283	1/2:181:0,77,104:0:0:77,104:2701,3683:-520.095,-300.351,-277.171,-220.096,0,-188.789	1/1:48:0,48,0:0:0:48,0:1686,0:-151.857,-14.4494,0,-151.857,-14.4494,-151.857	1/1:77:0,77,0:0:0:77,0:2701,0:-241.71,-23.1793,0,-241.71,-23.1793,-241.71	1/1:133:0,133,0:0:0:133,0:4561,0:-409.946,-40.037,0,-409.946,-40.037,-409.946	1/2:64:0,28,36:0:0:28,36:972,1288:-184.297,-105.383,-96.9544,-79.2654,0,-68.4283	1/2:67:0,35,31:0:0:35,31:1187,1075:-183.443,-87.3545,-76.8184,-96.072,0,-86.7401	1/1:85:0,85,0:0:0:85,0:2927,0:-263.15,-25.5876,0,-263.15,-25.5876,-263.15	1/1:63:0,63,0:0:0:63,0:2154,0:-193.521,-18.9649,0,-193.521,-18.9649,-193.521	1/1:74:0,74,0:0:0:74,0:2581,0:-232.297,-22.2762,0,-232.297,-22.2762,-232.297	1/1:76:0,75,1:0:0:75,1:2551,36:-229.265,-22.5773,0,-226.328,-19.28,-226.027	1/1:59:0,59,0:0:0:59,0:2047,0:-184.252,-17.7608,0,-184.252,-17.7608,-184.252	1/1:65:0,65,0:0:0:65,0:2274,0:-204.668,-19.567,0,-204.668,-19.567,-204.668	1/1:202:0,202,0:0:0:202,0:6910,0:-621.121,-60.8081,0,-621.121,-60.8081,-621.121	1/1:147:0,145,2:0:0:145,2:5008,72:-449.721,-43.6494,0,-443.846,-37.4147,-443.244	1/2:105:0,39,66:0:0:39,66:1347,2330:-299.397,-190.087,-178.347,-109.658,0,-89.7898	1/1:20:0,20,0:0:0:20,0:672,0:-60.0115,-6.0206,0,-60.0115,-6.0206,-60.0115	1/1:93:0,93,0:0:0:93,0:3237,0:-291.424,-27.9958,0,-291.424,-27.9958,-291.424	1/1:91:0,90,0:0:0:90,0:3066,0:-273.283,-27.0927,0,-273.283,-27.0927,-273.283	1/2:220:0,125,95:0:0:125,95:4251,3404:-621.892,-277.975,-240.347,-344.266,0,-315.668	1/1:255:0,255,0:0:0:255,0:8777,0:-788.21,-76.7627,0,-788.21,-76.7627,-788.21	1/1:38:0,38,0:0:0:38,0:1318,0:-118.833,-11.4391,0,-118.833,-11.4391,-118.833	1/1:396:0,393,2:0:0:393,2:13641,72:-1225.37,-118.305,0,-1219.5,-112.402,-1218.9	1/1:118:0,115,3:0:0:115,3:3967,108:-356.519,-34.6185,0,-347.711,-25.8109,-346.808	1/1:91:0,91,0:0:0:91,0:3159,0:-284.166,-27.3937,0,-284.166,-27.3937,-284.166	1/2:16:0,5,11:0:0:5,11:156,392:-44.4996,-31.9839,-30.4788,-12.521,0,-9.20972	1/1:37:0,37,0:0:0:37,0:1262,0:-113.82,-11.1381,0,-113.82,-11.1381,-113.82	1/1:12:0,12,0:0:0:12,0:407,0:-36.9474,-3.61236,0,-36.9474,-3.61236,-36.9474	1/1:14:0,14,0:0:0:14,0:497,0:-44.6943,-4.21442,0,-44.6943,-4.21442,-44.6943	1/2:17:0,13,4:0:0:13,4:449,144:-48.5689,-12.1095,-8.19611,-36.8157,0,-35.6116	1/1:245:0,245,0:0:0:245,0:8454,0:-759.864,-73.7524,0,-759.864,-73.7524,-759.864	1/1:212:0,211,1:0:0:211,1:7269,36:-652.934,-63.5173,0,-649.996,-60.2201,-649.695	1/2:122:0,66,55:0:0:66,55:2335,1976:-351.027,-161.165,-141.297,-189.86,0,-173.304	1/1:5:0,5,0:0:0:5,0:178,0:-16.3615,-1.50515,0,-16.3615,-1.50515,-16.3615	1/2:113:0,59,54:0:0:59,54:2035,1933:-323.015,-157.974,-140.214,-165.392,0,-149.136	1/2:68:0,35,33:0:0:35,33:1226,1179:-196.048,-96.4832,-85.9472,-99.9183,0,-89.9843	1/1:93:0,93,0:0:0:93,0:3190,0:-287.072,-27.9958,0,-287.072,-27.9958,-287.072	1/1:78:0,77,0:0:0:77,0:2624,0:-235.741,-23.1793,0,-235.741,-23.1793,-235.741	1/1:72:0,72,0:0:0:72,0:2458,0:-220.953,-21.6742,0,-220.953,-21.6742,-220.953	1/2:57:0,23,34:0:0:23,34:770,1208:-160.837,-98.7902,-91.8665,-62.389,0,-52.154	1/1:151:0,151,0:0:0:151,0:5235,0:-470.857,-45.4555,0,-470.857,-45.4555,-470.857	1/1:146:0,146,0:0:0:146,0:5085,0:-456.772,-43.9504,0,-456.772,-43.9504,-456.772	1/1:112:0,112,0:0:0:112,0:3914,0:-351.887,-33.7154,0,-351.887,-33.7154,-351.887	1/2:176:0,93,83:0:0:93,83:3283,2976:-510.14,-243.084,-215.089,-267.411,0,-242.426	1/1:185:0,183,2:0:0:183,2:6381,72:-572.878,-55.0885,0,-567.004,-48.8538,-566.401	1/1:24:0,24,0:0:0:24,0:829,0:-74.7245,-7.22472,0,-74.7245,-7.22472,-74.7245	1/2:140:0,59,81:0:0:59,81:2014,2861:-396.281,-233.325,-215.564,-163.302,0,-138.919	1/1:24:0,24,0:0:0:24,0:803,0:-72.3943,-7.22472,0,-72.3943,-7.22472,-72.3943	1/1:22:0,22,0:0:0:22,0:757,0:-68.4325,-6.62266,0,-68.4325,-6.62266,-68.4325	1/2:126:0,66,60:0:0:66,60:2306,2144:-362.546,-175.138,-155.27,-187.761,0,-169.699	1/2:30:0,18,12:0:0:18,12:626,428:-86.0641,-35.2049,-29.7863,-5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chr03	7504563	.	C	G	67301.8	PASS	AB=0.506639;ABP=5.5474;AC=32;AF=0.170213;AN=188;AO=3391;CIGAR=1X;DP=18340;DPB=18340;DPRA=1.24573;EPP=7366.47;EPPR=32449.2;GTI=1;LEN=1;MEANALT=1.04545;MQM=45.6948;MQMR=45.9971;NS=94;NUMALT=1;ODDS=1.73829;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120093;QR=532783;RO=14942;RPL=1747;RPP=9.80392;RPPR=323.92;RPR=1644;RUN=1;SAF=1747;SAP=9.80392;SAR=1644;SRF=6728;SRP=323.92;SRR=8214;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:136:85,51:85:3034:51:1816:-112.468,0,-223.152	0/1:225:119,106:119:4268:106:3759:-198.836,0,-274.41	0/1:288:131,157:131:4654:157:5568:-368.059,0,-303.099	0/0:261:261,0:261:9274:0:0:0,-78.5688,-792.064	0/0:116:114,2:114:4070:2:72:0,-29.4042,-335.906	0/0:92:92,0:92:3281:0:0:0,-27.6948,-269.248	0/0:191:189,2:189:6746:2:72:0,-52.3643,-563.599	0/1:390:186,204:186:6646:204:7256:-453.795,0,-416.217	0/0:182:180,0:180:6389:0:0:0,-54.1854,-520.875	0/0:274:271,3:271:9688:3:108:0,-73.736,-818.233	0/0:171:170,1:170:6057:1:36:0,-47.8779,-514.485	0/1:272:149,123:149:5275:123:4364:-280.276,0,-360.293	0/1:233:113,120:113:4030:120:4238:-261.486,0,-265.812	0/0:199:199,0:199:7056:0:0:0,-59.905,-596.289	0/0:195:195,0:195:6947:0:0:0,-58.7008,-600.509	0/0:164:164,0:164:5848:0:0:0,-49.3689,-500.269	0/0:135:135,0:135:4804:0:0:0,-40.639,-379.489	0/0:126:126,0:126:4462:0:0:0,-37.9298,-358.427	0/0:85:85,0:85:3056:0:0:0,-25.5875,-245.77	0/0:339:339,0:339:12146:0:0:0,-102.049,-1035.67	0/0:387:387,0:387:13747:0:0:0,-116.499,-1167.63	0/1:90:36,54:36:1283:54:1889:-134.535,0,-83.3334	0/0:204:204,0:204:7311:0:0:0,-61.4101,-630.794	0/0:223:222,1:222:7914:1:36:0,-64.2269,-646.675	0/0:87:87,0:87:3083:0:0:0,-26.1896,-262.465	0/1:505:245,260:245:8745:260:9199:-623.974,0,-602.043	0/0:461:460,0:460:16418:0:0:0,-138.474,-1379.03	0/0:104:104,0:104:3697:0:0:0,-31.3071,-311.437	0/1:377:186,191:186:6636:191:6787:-463.714,0,-459.668	0/0:133:132,1:132:4724:1:36:0,-36.4387,-393.869	0/0:258:258,0:258:9191:0:0:0,-77.6657,-779.688	0/1:4:2,2:2:72:2:72:-4.64501,0,-5.24248	0/0:33:33,0:33:1175:0:0:0,-9.93399,-96.5175	0/0:12:12,0:12:432:0:0:0,-3.61236,-33.9323	0/0:14:14,0:14:504:0:0:0,-4.21442,-38.567	0/1:30:17,13:17:593:13:460:-28.2976,0,-37.2694	0/0:474:474,0:474:16871:0:0:0,-142.688,-1473.7	0/0:197:197,0:197:7028:0:0:0,-59.3029,-576.805	0/1:151:91,60:91:3243:60:2127:-120.735,0,-213.626	0/0:4:4,0:4:144:0:0:0,-1.20412,-12.4308	0/1:283:136,147:136:4842:147:5229:-340.693,0,-319.809	0/1:74:31,43:31:1097:43:1536:-103.366,0,-70.9408	0/0:394:394,0:394:14029:0:0:0,-118.606,-1185.38	0/0:234:233,0:233:8317:0:0:0,-70.14,-712.866	0/0:170:170,0:170:6052:0:0:0,-51.1751,-512.763	0/1:218:122,95:122:4359:95:3373:-226.022,0,-317.413	0/0:163:163,0:163:5830:0:0:0,-49.0679,-480.41	0/0:405:404,1:404:14402:1:36:0,-118.319,-1233.02	0/0:206:206,0:206:7330:0:0:0,-62.0122,-628.843	0/1:222:103,119:103:3672:119:4220:-282.622,0,-242.847	0/0:171:171,0:171:6059:0:0:0,-51.4761,-512.365	0/0:19:19,0:19:684:0:0:0,-5.71957,-57.6557	0/1:205:99,106:99:3537:106:3770:-244.762,0,-228.308	0/0:92:92,0:92:3275:0:0:0,-27.6948,-288.985	0/0:7:7,0:7:243:0:0:0,-2.10721,-21.7103	0/1:279:139,140:139:4939:140:4963:-332.551,0,-331.563	0/1:125:42,83:42:1512:83:2915:-204.28,0,-91.1277	0/1:22:15,7:15:540:7:252:-14.1528,0,-40.6233	0/0:20:20,0:20:711:0:0:0,-6.0206,-61.9205	0/0:221:221,0:221:7895:0:0:0,-66.5276,-679.102	0/1:223:113,110:113:4044:110:3907:-264.926,0,-281.781	0/0:8:8,0:8:288:0:0:0,-2.40824,-25.3471	0/0:215:215,0:215:7659:0:0:0,-64.7214,-664.439	0/0:344:337,7:337:12029:7:252:0,-81.3933,-1000.56	0/0:169:157,12:157:5628:12:432:0,-16.3877,-433.277	0/0:127:127,0:127:4541:0:0:0,-38.2308,-386.99	0/0:411:410,1:410:14652:1:36:0,-120.125,-1261.65	0/1:229:84,145:84:2999:145:5143:-371.241,0,-192.059	0/0:102:102,0:102:3632:0:0:0,-30.7051,-313.089	0/0:158:158,0:158:5659:0:0:0,-47.5627,-456.25	0/1:166:102,64:102:3640:64:2287:-144.535,0,-265.95	0/0:33:33,0:33:1184:0:0:0,-9.93399,-102.537	0/0:198:197,1:197:7017:1:36:0,-56.8677,-592.656	0/0:196:196,0:196:6978:0:0:0,-59.0019,-589.705	0/0:405:405,0:405:14431:0:0:0,-121.917,-1196.21	0/0:283:283,0:283:10147:0:0:0,-85.1915,-864.494	0/1:284:113,170:113:4031:170:6038:-404.276,0,-241.574	0/1:240:134,106:134:4803:106:3750:-213.835,0,-312.609	0/1:23:15,8:15:523:8:279:-16.5575,0,-35.3925	0/0:220:220,0:220:7875:0:0:0,-66.2266,-654.808	0/0:193:193,0:193:6886:0:0:0,-58.0988,-550.424	0/0:328:327,1:327:11674:1:36:0,-95.6142,-999.655	0/0:174:173,0:173:6128:0:0:0,-52.0782,-524.948	0/1:168:85,83:85:3014:83:2954:-198.879,0,-213.211	0/1:210:118,92:118:4184:92:3225:-202.897,0,-293.374	0/1:380:200,180:200:7123:180:6298:-415.881,0,-499.348	0/0:76:76,0:76:2706:0:0:0,-22.8783,-214.818	0/0:216:216,0:216:7656:0:0:0,-65.0225,-629.638	0/0:169:169,0:169:6055:0:0:0,-50.8741,-500.284	0/1:132:70,62:70:2512:62:2183:-138.625,0,-170.109	0/1:172:79,93:79:2785:93:3280:-219.342,0,-181.197	0/1:272:108,164:108:3854:164:5768:-413.823,0,-255.746	0/0:131:131,0:131:4666:0:0:0,-39.4349,-404.76	0/0:333:333,0:333:11913:0:0:0,-100.243,-1033.12
chr03	7939923	.	GC	TT,TC	300482	PASS	AB=0.483292,0.514251;ABP=12.8785,10.1895;AC=156,32;AF=0.829787,0.170213;AN=188;AO=9146,2118;CIGAR=2X,1X1M;DP=11282;DPB=11283.5;DPRA=0,1.43777;EPP=19863.3,4602.19;EPPR=7.35324;GTI=0;LEN=2,1;MEANALT=1.65957,2.21277;MQM=48.1956,54.3211;MQMR=60;NS=94;NUMALT=2;ODDS=1.30071;PAIRED=0,0;PAIREDR=0;PAO=1.5,1.5;PQA=54,54;PQR=0;PRO=0;QA=321173,75326;QR=72;RO=2;RPL=3905,862;RPP=426.786,162.165;RPPR=7.35324;RPR=5241,1256;RUN=1,1;SAF=3905,862;SAP=426.786,162.165;SAR=5241,1256;SRF=2;SRP=7.35324;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:88:0,47,41:0:0:47,41:1594,1443:-241.977,-117.328,-103.18,-124.988,0,-112.646	1/2:141:0,74,67:0:0:74,67:2600,2391:-401.252,-195.101,-172.824,-206.502,0,-186.333	1/2:250:0,124,126:0:0:124,126:4320,4459:-701.719,-362.035,-324.707,-340.028,0,-302.099	1/1:266:0,264,1:0:0:264,1:9203,36:-811.415,-79.4719,0,-808.477,-76.4791,-808.176	1/1:88:0,87,1:0:0:87,1:3041,36:-268.032,-26.1896,0,-265.094,-22.8924,-264.793	1/1:86:0,86,0:0:0:86,0:3075,0:-270.346,-25.8886,0,-270.346,-25.8886,-270.346	1/1:120:0,120,0:0:0:120,0:4217,0:-371.187,-36.1236,0,-371.187,-36.1236,-371.187	1/2:173:0,86,86:0:0:86,86:3019,3079:-485.038,-250.042,-224.153,-235.091,0,-209.202	1/1:113:0,112,1:0:0:112,1:3904,36:-345.652,-33.7154,0,-342.723,-30.4272,-342.421	1/1:148:0,147,0:0:0:147,0:5171,0:-448.638,-44.2514,0,-448.638,-44.2514,-448.638	1/1:83:0,83,0:0:0:83,0:2925,0:-255.241,-24.9855,0,-255.241,-24.9855,-255.241	1/2:124:0,77,47:0:0:77,47:2701,1688:-351.389,-137.718,-114.538,-214.023,0,-199.875	1/2:87:0,42,42:0:0:42,42:1449,1488:-234.54,-120.882,-108.239,-113.693,0,-101.05	1/1:113:0,113,0:0:0:113,0:3923,0:-342.019,-34.0164,0,-342.019,-34.0164,-342.019	1/1:69:0,69,0:0:0:69,0:2426,0:-215.718,-20.7711,0,-215.718,-20.7711,-215.718	1/1:62:0,62,0:0:0:62,0:2186,0:-190.242,-18.6639,0,-190.242,-18.6639,-190.242	1/1:67:0,66,1:0:0:66,1:2324,36:-202.305,-19.868,0,-199.375,-16.5798,-199.074	1/1:64:0,64,0:0:0:64,0:2248,0:-199.715,-19.2659,0,-199.715,-19.2659,-199.715	1/1:66:0,66,0:0:0:66,0:2350,0:-205.457,-19.868,0,-205.457,-19.868,-205.457	1/1:276:0,276,0:0:0:276,0:9661,0:-848.403,-83.0843,0,-848.403,-83.0843,-848.403	1/1:191:0,189,2:0:0:189,2:6644,72:-577.201,-56.8947,0,-571.46,-50.8014,-570.857	1/2:127:0,47,80:0:0:47,80:1657,2864:-365.154,-233.217,-219.069,-132.286,0,-108.204	1/1:91:0,91,0:0:0:91,0:3252,0:-288.087,-27.3937,0,-288.087,-27.3937,-288.087	1/1:122:0,121,1:0:0:121,1:4266,36:-374.797,-36.4246,0,-371.859,-33.1274,-371.558	1/1:117:0,115,2:0:0:115,2:4033,72:-347.23,-34.6185,0,-341.364,-28.3935,-340.762	1/2:303:0,141,160:0:0:141,160:4951,5685:-854.296,-461.314,-418.869,-392.982,0,-344.817	1/1:304:0,303,1:0:0:303,1:10579,36:-929.904,-91.2121,0,-926.971,-87.9199,-926.67	1/1:48:0,48,0:0:0:48,0:1700,0:-149.395,-14.4494,0,-149.395,-14.4494,-149.395	1/2:266:0,123,142:0:0:123,142:4343,5034:-751.542,-407.699,-370.672,-343.941,0,-301.195	1/1:167:0,166,1:0:0:166,1:5834,36:-510.856,-49.971,0,-507.919,-46.6737,-507.618	1/1:146:0,146,0:0:0:146,0:5111,0:-450.21,-43.9504,0,-450.21,-43.9504,-450.21	1/2:7:0,2,5:0:0:2,5:72,176:-20.2735,-14.6592,-14.0572,-5.96147,0,-4.45632	1/1:53:0,53,0:0:0:53,0:1852,0:-161.533,-15.9546,0,-161.533,-15.9546,-161.533	1/1:16:0,15,0:0:0:15,0:508,0:-44.8337,-4.51545,0,-44.8337,-4.51545,-44.8337	1/1:11:0,11,0:0:0:11,0:396,0:-33.5602,-3.31133,0,-33.5602,-3.31133,-33.5602	1/2:36:0,10,26:0:0:10,26:339,905:-100,-73.7385,-70.7282,-26.5932,0,-18.7664	1/1:187:0,187,0:0:0:187,0:6518,0:-574.682,-56.2926,0,-574.682,-56.2926,-574.682	1/1:157:0,156,0:0:0:156,0:5455,0:-476.089,-46.9607,0,-476.089,-46.9607,-476.089	1/2:91:0,46,45:0:0:46,45:1615,1608:-257.648,-130.951,-117.104,-127.045,0,-113.498	1/1:6:0,6,0:0:0:6,0:203,0:-18.1051,-1.80618,0,-18.1051,-1.80618,-18.1051	1/2:174:0,107,67:0:0:107,67:3769,2375:-494.484,-193.362,-161.152,-301.473,0,-281.304	1/2:45:0,20,25:0:0:20,25:686,887:-126.64,-72.3505,-66.3299,-54.6328,0,-47.1071	1/1:234:0,234,0:0:0:234,0:8174,0:-713.44,-70.441,0,-713.44,-70.441,-713.44	1/1:99:0,99,0:0:0:99,0:3457,0:-302.504,-29.802,0,-302.504,-29.802,-302.504	1/1:76:1,75,0:1:36:75,0:2635,0:-229.268,-19.28,0,-229.569,-22.5773,-232.506	1/2:93:0,55,38:0:0:55,38:1962,1346:-266.293,-109.174,-92.6171,-157.471,0,-146.032	1/1:177:0,176,0:0:0:176,0:6183,0:-540.005,-52.9813,0,-540.005,-52.9813,-540.005	1/1:180:0,180,0:0:0:180,0:6321,0:-556.761,-54.1854,0,-556.761,-54.1854,-556.761	1/1:116:0,116,0:0:0:116,0:4084,0:-360.517,-34.9195,0,-360.517,-34.9195,-360.517	1/2:180:0,95,85:0:0:95,85:3376,3004:-511.972,-244.044,-215.446,-268.278,0,-242.69	1/1:199:0,199,0:0:0:199,0:6986,0:-614.708,-59.905,0,-614.708,-59.905,-614.708	1/1:22:0,22,0:0:0:22,0:787,0:-69.3619,-6.62266,0,-69.3619,-6.62266,-69.3619	1/2:178:0,89,89:0:0:89,89:3134,3168:-504.035,-257.603,-230.811,-246.78,0,-219.988	1/1:68:0,68,0:0:0:68,0:2411,0:-211.238,-20.47,0,-211.238,-20.47,-211.238	1/1:15:0,15,0:0:0:15,0:513,0:-45.1594,-4.51545,0,-45.1594,-4.51545,-45.1594	1/2:172:0,91,81:0:0:91,81:3170,2874:-484.353,-233.844,-206.45,-250.856,0,-226.473	1/2:72:0,28,4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chr03	8414045	.	A	T	104912	PASS	AB=0.542536;ABP=176.288;AC=34;AF=0.180851;AN=188;AO=6129;CIGAR=1X;DP=28937;DPB=28937;DPRA=3.0351;EPP=13312;EPPR=49530;GTI=1;LEN=1;MEANALT=1;MQM=59.9884;MQMR=59.9808;NS=94;NUMALT=1;ODDS=3.4761;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=219574;QR=816387;RO=22808;RPL=0;RPP=13312;RPPR=49530;RPR=6129;RUN=1;SAF=6129;SAP=13312;SAR=0;SRF=22808;SRP=49530;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:42:18,24:18:648:24:856:-64.7178,0,-46.0086	0/1:254:113,141:113:4026:141:5052:-378.363,0,-286.065	0/1:152:81,71:81:2889:71:2548:-183.814,0,-214.488	0/0:240:240,0:240:8616:0:0:0,-72.2472,-775.432	0/0:110:110,0:110:3948:0:0:0,-33.1133,-355.511	0/0:104:104,0:104:3725:0:0:0,-31.3071,-335.449	0/0:191:186,5:186:6652:5:180:0,-40.9447,-582.184	0/1:253:122,131:122:4331:131:4692:-346.194,0,-313.803	0/0:108:108,0:108:3868:0:0:0,-32.5112,-348.315	0/0:135:135,0:135:4833:0:0:0,-40.639,-434.96	0/0:507:497,10:497:17856:10:360:0,-119.878,-1573.89	0/1:100:42,58:42:1497:58:2076:-157.008,0,-104.92	0/1:76:39,37:39:1404:37:1328:-96.944,0,-103.781	0/0:60:59,1:59:2093:1:36:0,-14.4635,-185.04	0/0:73:71,2:71:2541:2:72:0,-15.1385,-222.102	0/0:86:86,0:86:3073:0:0:0,-25.8886,-276.797	0/0:88:86,2:86:3069:2:72:0,-19.6539,-269.601	0/0:77:76,1:76:2736:1:36:0,-19.581,-242.884	0/0:322:311,11:311:11161:11:388:0,-61.6743,-969.115	0/0:302:302,0:302:10802:0:0:0,-90.9111,-972.081	0/0:114:114,0:114:4084:0:0:0,-34.3174,-367.746	0/1:112:24,88:24:856:88:3156:-250.549,0,-43.5998	0/0:108:108,0:108:3838:0:0:0,-32.5112,-345.615	0/0:157:157,0:157:5602:0:0:0,-47.2617,-504.299	0/0:91:90,1:90:3221:1:36:0,-23.7955,-286.512	0/1:362:178,184:178:6365:184:6584:-483.666,0,-463.965	0/0:216:215,1:215:7698:1:36:0,-61.4242,-689.252	0/1:50:45,5:45:1616:5:176:-1.13352,0,-130.679	0/1:247:107,140:107:3825:140:5020:-377.591,0,-270.063	0/0:169:163,6:163:5848:6:216:0,-31.0836,-506.64	0/0:169:167,2:167:5930:2:72:0,-44.0373,-526.887	0/1:1265:623,642:623:22247:642:22996:-1688.23,0,-1620.84	0/0:1510:1508,2:1508:53988:2:72:0,-447.719,-4850.16	0/0:1078:1069,9:1069:38250:9:324:0,-295.004,-3411.08	0/0:1879:1865,14:1865:66576:14:500:0,-520.299,-5942.97	0/1:1084:571,513:571:20420:513:18408:-1329.95,0,-1510.98	0/0:233:232,1:232:8328:1:32:0,-66.9407,-746.325	0/0:236:236,0:236:8440:0:0:0,-71.0431,-759.604	0/1:649:294,355:294:10553:355:12727:-949.881,0,-754.309	0/0:736:731,5:731:26197:5:180:0,-205.006,-2340.4	0/1:167:70,97:70:2520:97:3476:-262.779,0,-176.779	0/1:342:169,173:169:6072:173:6204:-455.503,0,-443.627	0/0:194:192,2:192:6873:2:72:0,-51.5631,-611.8	0/0:62:58,4:58:2088:4:144:0,-5.35024,-174.876	0/0:72:72,0:72:2565:0:0:0,-21.6742,-231.099	0/1:133:67,66:67:2396:66:2352:-171.894,0,-175.86	0/0:135:133,2:133:4784:2:72:0,-33.8023,-423.877	0/0:168:168,0:168:6036:0:0:0,-50.573,-543.341	0/0:130:130,0:130:4668:0:0:0,-39.1339,-420.28	0/1:193:77,116:77:2772:116:4156:-316.124,0,-191.621	0/0:148:148,0:148:5300:0:0:0,-44.5524,-477.135	0/0:1092:1087,5:1087:38998:5:180:0,-312.173,-3491.97	0/1:242:127,115:127:4556:115:4128:-298.854,0,-337.356	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.307	0/0:1112:1105,7:1105:39473:7:252:0,-311.716,-3528.23	0/1:208:132,76:132:4744:76:2693:-180,0,-364.502	0/1:74:40,34:40:1440:34:1216:-87.4703,0,-107.622	0/1:1048:435,613:435:15516:613:21887:-1653.79,0,-1080.64	0/0:1139:1128,11:1128:40377:11:396:0,-306.89,-3596.51	0/0:112:111,1:111:3954:1:36:0,-30.1171,-352.451	0/1:94:46,48:46:1641:48:1720:-126.789,0,-119.68	0/0:673:665,8:665:23799:8:288:0,-176.326,-2113.98	0/0:111:111,0:111:3992:0:0:0,-33.4143,-359.468	0/0:228:225,3:225:8034:3:108:0,-58.5597,-712.873	0/1:88:78,10:78:2792:10:356:-5.89061,0,-225.025	0/0:111:110,1:110:3940:1:36:0,-29.8161,-351.194	0/0:215:214,1:214:7630:1:36:0,-61.1232,-683.137	0/1:131:34,97:34:1224:97:3483:-274.246,0,-71.0321	0/0:391:384,7:384:13770:7:252:0,-94.6738,-1216.04	0/0:68:68,0:68:2410:0:0:0,-20.47,-217.154	0/1:112:42,70:42:1512:70:2508:-192.257,0,-102.659	0/0:1006:994,12:994:35600:12:428:0,-263.977,-3163.99	0/0:114:114,0:114:4092:0:0:0,-34.3174,-368.465	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.901	0/0:225:225,0:225:8038:0:0:0,-67.7317,-723.381	0/0:195:193,2:193:6909:2:72:0,-51.8641,-615.039	0/1:171:67,104:67:2404:104:3728:-284.244,0,-165.132	0/1:154:79,75:79:2840:75:2688:-195.806,0,-209.479	0/1:998:341,657:341:12220:657:23596:-1822.56,0,-799.214	0/0:133:132,1:132:4740:1:36:0,-36.4387,-423.159	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.528	0/0:286:283,3:283:10141:3:108:0,-76.0194,-902.543	0/0:109:108,1:108:3869:1:36:0,-29.214,-344.805	0/1:82:32,50:32:1148:50:1784:-136.158,0,-78.9454	0/1:95:42,53:42:1497:53:1887:-141.51,0,-106.425	0/1:175:73,102:73:2624:102:3652:-276.204,0,-183.722	0/0:61:61,0:61:2181:0:0:0,-18.3628,-196.554	0/0:104:102,2:102:3664:2:72:0,-24.4704,-323.126	0/0:62:62,0:62:2217:0:0:0,-18.6639,-199.793	0/1:622:273,349:273:9789:349:12513:-938.756,0,-693.711	0/1:1160:534,626:534:19145:626:22428:-1668.58,0,-1373.4	0/1:91:29,62:29:1029:62:2228:-173.39,0,-65.5274	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:129:128,1:128:4574:1:36:0,-35.2346,-40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chr03	8630273	.	C	T	50133.2	PASS	AB=0.480442;ABP=21.9517;AC=32;AF=0.170213;AN=188;AO=2764;CIGAR=1X;DP=18293;DPB=18293;DPRA=1.79959;EPP=4960.43;EPPR=27389.2;GTI=0;LEN=1;MEANALT=1.1087;MQM=59.9787;MQMR=59.9724;NS=94;NUMALT=1;ODDS=30.9715;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98934;QR=555966;RO=15521;RPL=126;RPP=4960.43;RPPR=27389.2;RPR=2638;RUN=1;SAF=2764;SAP=6004.96;SAR=0;SRF=15521;SRP=33706.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:12,18:12:428:18:648:-49.621,0,-29.8279	0/1:192:98,94:98:3508:94:3372:-245.898,0,-258.063	0/1:83:53,30:53:1908:30:1065:-71.1743,0,-147.012	0/0:189:189,0:189:6776:0:0:0,-56.8947,-609.911	0/0:89:89,0:89:3181:0:0:0,-26.7917,-286.323	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03	0/0:126:126,0:126:4508:0:0:0,-37.9298,-405.889	0/1:157:90,67:90:3232:67:2379:-167.104,0,-243.804	0/0:104:103,1:103:3692:1:36:0,-27.7088,-328.884	0/0:76:76,0:76:2705:0:0:0,-22.8783,-243.693	0/0:139:139,0:139:4974:0:0:0,-41.8432,-447.807	0/1:74:36,38:36:1292:38:1360:-100.424,0,-94.3075	0/1:52:25,27:25:888:27:972:-72.1443,0,-64.5855	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/0:57:57,0:57:2040:0:0:0,-17.1587,-183.872	0/0:38:38,0:38:1351:0:0:0,-11.4391,-121.89	0/0:138:137,1:137:4889:1:36:0,-37.9439,-436.564	0/0:175:175,0:175:6284:0:0:0,-52.6802,-565.646	0/0:119:119,0:119:4260:0:0:0,-35.8226,-383.579	0/1:118:35,83:35:1256:83:2964:-231.472,0,-77.8237	0/0:144:144,0:144:5172:0:0:0,-43.3483,-465.614	0/0:92:92,0:92:3304:0:0:0,-27.6948,-297.578	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.285	0/1:318:172,146:172:6156:146:5238:-375.821,0,-458.284	0/0:272:272,0:272:9761:0:0:0,-81.8802,-878.432	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/1:189:101,88:101:3632:88:3144:-226.289,0,-270.189	0/0:160:155,5:155:5557:5:180:0,-31.6127,-483.699	0/0:159:158,0:158:5646:0:0:0,-47.5627,-507.797	0/1:951:471,480:471:16893:480:17187:-1260.15,0,-1233.73	0/0:834:830,3:830:29809:3:108:0,-241.043,-2671.68	0/0:982:982,0:982:35166:0:0:0,-295.611,-3163.8	0/0:1244:1242,1:1242:44452:1:36:0,-370.942,-3995.12	0/1:476:266,210:266:9540:210:7497:-531.463,0,-715.264	0/0:176:175,1:175:6251:1:36:0,-49.383,-559.088	0/0:251:251,0:251:9004:0:0:0,-75.5585,-810.334	0/1:217:122,95:122:4358:95:3390:-239.992,0,-327.071	0/0:597:597,0:597:21418:0:0:0,-179.715,-1927.01	0/1:151:99,52:99:3545:52:1837:-120.153,0,-273.801	0/1:104:56,48:56:1999:48:1720:-123.778,0,-148.876	0/0:163:162,0:162:5789:0:0:0,-48.7669,-520.736	0/0:46:45,1:45:1598:1:36:0,-10.2491,-140.51	0/0:49:49,0:49:1743:0:0:0,-14.7505,-157.154	0/1:73:40,33:40:1440:33:1172:-83.8123,0,-107.923	0/0:165:164,1:164:5868:1:36:0,-46.0717,-524.633	0/0:225:225,0:225:8041:0:0:0,-67.7317,-723.71	0/0:129:129,0:129:4617:0:0:0,-38.8329,-415.692	0/1:144:69,75:69:2453:75:2692:-199.176,0,-177.675	0/0:182:182,0:182:6513:0:0:0,-54.7875,-586.25	0/0:687:686,1:686:24554:1:36:0,-203.209,-2205.58	0/1:87:45,42:45:1616:42:1512:-110.185,0,-119.54	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:847:844,1:844:30237:1:36:0,-251.125,-2716.82	0/1:126:79,47:79:2831:47:1688:-114.276,0,-216.825	0/1:53:32,21:32:1152:21:741:-51.057,0,-88.0356	0/1:747:365,382:365:13046:382:13678:-1005.93,0,-949.079	0/0:690:688,1:688:24680:1:36:0,-204.171,-2216.88	0/0:92:92,0:92:3300:0:0:0,-27.6948,-297.218	0/1:65:30,35:30:1061:35:1237:-92.0653,0,-76.2324	0/0:539:536,3:536:19203:3:108:0,-152.18,-1717.72	0/0:142:142,0:142:5068:0:0:0,-42.7463,-456.264	0/0:248:248,0:248:8904:0:0:0,-74.6554,-801.311	0/0:114:110,4:110:3952:4:144:0,-21.0038,-342.427	0/0:72:72,0:72:2584:0:0:0,-21.6742,-232.809	0/0:185:185,0:185:6605:0:0:0,-55.6905,-594.53	0/1:100:51,49:51:1820:49:1756:-128.221,0,-133.978	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.829	0/0:81:81,0:81:2900:0:0:0,-24.3834,-261.228	0/1:40:27,13:27:968:13:468:-30.4184,0,-75.3962	0/0:138:138,0:138:4952:0:0:0,-41.5421,-445.828	0/0:84:84,0:84:3008:0:0:0,-25.2865,-270.951	0/0:47:47,0:47:1677:0:0:0,-14.1484,-151.214	0/0:129:129,0:129:4620:0:0:0,-38.8329,-415.96	0/0:134:133,1:133:4776:1:36:0,-36.7397,-426.397	0/1:113:68,45:68:2436:45:1615:-111.624,0,-185.479	0/1:52:18,34:18:644:34:1224:-94.8135,0,-42.637	0/1:333:150,183:150:5372:183:6580:-492.034,0,-383.357	0/0:125:124,0:124:4448:0:0:0,-37.3277,-400.13	0/0:114:114,0:114:4092:0:0:0,-34.3174,-368.465	0/0:171:171,0:171:6136:0:0:0,-51.4761,-552.338	0/0:88:88,0:88:3164:0:0:0,-26.4906,-284.984	0/1:24:14,10:14:500:10:360:-25.5196,0,-38.1115	0/1:70:42,28:42:1512:28:1008:-69.9643,0,-115.303	0/1:129:71,58:71:2544:58:2069:-147.646,0,-190.378	0/0:34:34,0:34:1207:0:0:0,-10.235,-108.935	0/0:70:70,0:70:2487:0:0:0,-21.0721,-224.083	0/0:41:41,0:41:1459:0:0:0,-12.3422,-131.605	0/1:103:54,49:54:1944:49:1763:-127.948,0,-144.23	0/1:281:157,124:157:5623:124:4442:-315.36,0,-421.601	0/1:49:14,35:14:500:35:1256:-98.5948,0,-30.5857	0/0:107:107,0:107:3783:0:0:0,-32.2102,-340.67	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545
chr03	9215221	.	AAC	GAC,GAT	650147	PASS	AB=0.56886,0.427483;ABP=138.184,152.92;AC=172,16;AF=0.914894,0.0851064;AN=188;AO=22542,1441;CIGAR=1X2M,1X1M1X;DP=24039;DPB=24112.7;DPRA=0,1.19817;EPP=48943.7,3132.1;EPPR=22.5536;GTI=1;LEN=1,3;MEANALT=1.75532,2.62069;MQM=59.928,59.6371;MQMR=60;NS=94;NUMALT=2;ODDS=48.2304;PAIRED=0,0;PAIREDR=0;PAO=69.5,72.5;PQA=2359.5,2467.5;PQR=0;PRO=78;QA=794548,50068;QR=267;RO=9;RPL=5765,375;RPP=11684.4,722.536;RPPR=3.25157;RPR=16777,1066;RUN=1,1;SAF=5764,375;SAP=11688.6,722.536;SAR=16778,1066;SRF=5;SRP=3.25157;SRR=4;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:54:0,54,0:0:0:54,0:1888,0:-170.109,-16.2556,0,-170.109,-16.2556,-170.109	1/1:133:0,132,1:0:0:132,1:4671,36:-420.327,-39.736,0,-417.459,-36.8251,-417.158	1/1:127:0,127,0:0:0:127,0:4471,0:-402.318,-38.2308,0,-402.318,-38.2308,-402.318	1/1:459:0,457,0:0:0:457,0:16175,0:-1455.04,-137.571,0,-1455.04,-137.571,-1455.04	1/1:188:0,188,0:0:0:188,0:6661,0:-599.5,-56.5936,0,-599.5,-56.5936,-599.5	1/1:129:0,129,0:0:0:129,0:4554,0:-409.914,-38.8329,0,-409.914,-38.8329,-409.914	1/1:179:0,179,0:0:0:179,0:6265,0:-563.821,-53.8844,0,-563.821,-53.8844,-563.821	1/1:183:0,183,0:0:0:183,0:6489,0:-584.01,-55.0885,0,-584.01,-55.0885,-584.01	1/1:259:0,259,0:0:0:259,0:9110,0:-819.824,-77.9668,0,-819.824,-77.9668,-819.824	1/1:182:0,182,0:0:0:182,0:6438,0:-579.503,-54.7875,0,-579.503,-54.7875,-579.503	1/1:262:0,262,0:0:0:262,0:9256,0:-833.007,-78.8699,0,-833.007,-78.8699,-833.007	1/1:65:0,65,0:0:0:65,0:2311,0:-208.157,-19.567,0,-208.157,-19.567,-208.157	1/1:42:0,42,0:0:0:42,0:1480,0:-133.493,-12.6433,0,-133.493,-12.6433,-133.493	1/1:88:0,88,0:0:0:88,0:3109,0:-280.038,-26.4906,0,-280.038,-26.4906,-280.038	1/1:83:0,83,0:0:0:83,0:2951,0:-265.76,-24.9855,0,-265.76,-24.9855,-265.76	1/1:86:0,86,0:0:0:86,0:3033,0:-273.195,-25.8886,0,-273.195,-25.8886,-273.195	1/1:60:0,60,0:0:0:60,0:2131,0:-191.993,-18.0618,0,-191.993,-18.0618,-191.993	1/1:66:0,66,0:0:0:66,0:2343,0:-211.129,-19.868,0,-211.129,-19.868,-211.129	1/1:181:0,180,0:0:0:180,0:6350,0:-571.381,-54.1854,0,-571.381,-54.1854,-571.381	1/1:433:0,432,0:0:0:432,0:15235,0:-1370.57,-130.045,0,-1370.57,-130.045,-1370.57	1/1:249:1,247,0:1:36:247,0:8615,0:-771.894,-71.367,0,-772.195,-74.3544,-775.132	1/2:295:0,83,208:0:0:83,208:2902,7194:-820.38,-584.298,-559.313,-236.114,0,-173.5	1/1:268:1,267,0:1:28:267,0:9373,0:-840.498,-77.8763,0,-840.799,-80.375,-843.017	1/1:261:0,259,0:0:0:259,0:9092,0:-817.917,-77.9668,0,-817.917,-77.9668,-817.917	1/1:203:0,203,0:0:0:203,0:7114,0:-640.143,-61.1091,0,-640.143,-61.1091,-640.143	1/2:490:1,272,214:1:21:272,214:9633,7441:-1387.76,-603.358,-523.066,-783.205,0,-720.373	1/1:462:0,461,0:0:0:461,0:16356,0:-1471.54,-138.775,0,-1471.54,-138.775,-1471.54	1/1:32:0,32,0:0:0:32,0:1132,0:-102.189,-9.63296,0,-102.189,-9.63296,-102.189	1/2:545:0,284,259:0:0:284,259:10016,9091:-1555.1,-739.925,-654.433,-815.288,0,-737.321	1/1:306:0,301,4:0:0:301,4:10629,138:-956.084,-90.61,0,-944.873,-79.3869,-943.668	1/1:324:0,322,0:0:0:322,0:11364,0:-1021.89,-96.9317,0,-1021.89,-96.9317,-1021.89	1/1:436:0,435,0:0:0:435,0:15323,0:-1378.43,-130.948,0,-1378.43,-130.948,-1378.43	1/1:858:0,856,2:0:0:856,2:30131,65:-2710.7,-257.682,0,-2705.46,-252.259,-2704.85	1/1:763:0,763,0:0:0:763,0:26867,0:-2417.24,-229.686,0,-2417.24,-229.686,-2417.24	1/1:700:0,699,0:0:0:699,0:24524,0:-2206.38,-210.42,0,-2206.38,-210.42,-2206.38	1/1:263:0,263,0:0:0:263,0:9302,0:-837.089,-79.1709,0,-837.089,-79.1709,-837.089	1/1:317:1,314,0:1:28:314,0:11054,0:-991.935,-92.2889,0,-992.236,-94.5234,-994.454	1/1:379:0,377,1:0:0:377,1:13270,36:-1193.76,-113.488,0,-1190.82,-110.531,-1190.52	1/1:137:0,137,0:0:0:137,0:4833,0:-434.943,-41.2411,0,-434.943,-41.2411,-434.943	1/1:385:1,384,0:1:36:384,0:13505,0:-1211.81,-112.508,0,-1212.11,-115.596,-1215.05	1/2:228:0,166,62:0:0:166,62:5860,2154:-652.492,-175.3,-125.329,-477.417,0,-458.753	1/1:82:0,75,7:0:0:75,7:2628,250:-236.411,-22.5773,0,-216.039,-1.84856,-213.932	1/1:347:0,347,0:0:0:347,0:12281,0:-1104.96,-104.457,0,-1104.96,-104.457,-1104.96	1/1:94:0,94,0:0:0:94,0:3355,0:-302.101,-28.2968,0,-302.101,-28.2968,-302.101	1/1:85:0,85,0:0:0:85,0:2961,0:-266.643,-25.5876,0,-266.643,-25.5876,-266.643	1/2:203:0,113,90:0:0:113,90:3961,3130:-577.031,-254.772,-220.756,-322.549,0,-295.456	1/1:233:0,233,0:0:0:233,0:8205,0:-738.348,-70.14,0,-738.348,-70.14,-738.348	1/1:395:0,394,0:0:0:394,0:13901,0:-1250.73,-118.606,0,-1250.73,-118.606,-1250.73	1/1:222:0,215,1:0:0:215,1:7639,36:-687.218,-64.7215,0,-684.281,-61.7798,-683.98	1/2:200:0,116,84:0:0:116,84:4104,2938:-573.602,-239.367,-204.447,-334.586,0,-309.3	1/1:355:0,355,0:0:0:355,0:12494,0:-1123.96,-106.866,0,-1123.96,-106.866,-1123.96	1/1:992:1,988,0:1:28:988,0:34875,0:-3134.83,-295.219,0,-3135.13,-297.418,-3137.35	1/1:112:0,112,0:0:0:112,0:3902,0:-351.288,-33.7154,0,-351.288,-33.7154,-351.288	1/1:113:0,112,0:0:0:112,0:3954,0:-355.635,-33.7154,0,-355.635,-33.7154,-355.635	1/1:944:0,943,0:0:0:943,0:33195,0:-2986.21,-283.871,0,-2986.21,-283.871,-2986.21	1/2:197:0,139,57:0:0:139,57:4889,195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chr03	9215264	.	C	T	25935.7	PASS	AB=0.451905;ABP=76.3256;AC=27;AF=0.143617;AN=188;AO=1670;CIGAR=1X;DP=19510;DPB=19510;DPRA=0.791;EPP=3629.37;EPPR=37593.2;GTI=2;LEN=1;MEANALT=1.02857;MQM=59.6389;MQMR=59.9664;NS=94;NUMALT=1;ODDS=7.95166;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59844;QR=637157;RO=17835;RPL=1670;RPP=3629.37;RPPR=37593.2;RPR=0;RUN=1;SAF=0;SAP=3629.37;SAR=1670;SRF=0;SRP=38731.2;SRR=17835;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:16,20:16:572:20:716:-53.9306,0,-40.9763	0/1:189:121,68:121:4319:68:2429:-161.895,0,-331.992	0/1:140:88,52:88:3147:52:1872:-126.608,0,-241.311	0/0:288:288,0:288:10296:0:0:0,-86.6966,-926.407	0/0:97:97,0:97:3468:0:0:0,-29.1999,-312.332	0/0:78:78,0:78:2769:0:0:0,-23.4803,-249.395	0/0:84:84,0:84:2986:0:0:0,-25.2865,-268.97	0/1:255:132,123:132:4707:123:4398:-319.097,0,-347.029	0/0:150:147,3:147:5212:3:108:0,-35.0793,-459.147	0/0:118:118,0:118:4220:0:0:0,-35.5215,-379.981	0/0:237:237,0:237:8449:0:0:0,-71.3441,-760.416	0/1:69:26,43:26:928:43:1536:-117.758,0,-63.0672	0/1:66:27,39:27:953:39:1404:-106.789,0,-66.2153	0/0:61:61,0:61:2167:0:0:0,-18.3628,-195.296	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:54:54,0:54:1932:0:0:0,-16.2556,-174.155	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/0:55:55,0:55:1964:0:0:0,-16.5566,-177.035	0/0:160:160,0:160:5686:0:0:0,-48.1648,-511.859	0/0:218:218,0:218:7779:0:0:0,-65.6245,-700.143	0/0:157:157,0:157:5611:0:0:0,-47.2617,-505.111	0/1:172:41,131:41:1433:131:4710:-371.962,0,-77.4866	0/0:177:177,0:177:6327:0:0:0,-53.2823,-569.522	0/0:196:196,0:196:6974:0:0:0,-59.0019,-627.729	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/1:382:212,170:212:7591:170:6070:-431.263,0,-568.234	0/0:232:232,0:232:8288:0:0:0,-69.839,-745.926	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:223:122,101:122:4357:101:3628:-259.559,0,-325.174	0/0:237:233,4:233:8338:4:144:0,-58.0305,-737.113	0/0:261:261,0:261:9298:0:0:0,-78.5688,-836.79	0/0:442:441,0:441:15761:0:0:0,-132.754,-1417.82	0/0:855:855,0:855:30582:0:0:0,-257.381,-2751.45	0/0:785:784,1:784:27999:1:36:0,-232.71,-2515.48	0/0:724:724,0:724:25902:0:0:0,-217.946,-2328.82	0/0:254:254,0:254:9070:0:0:0,-76.4616,-815.09	0/0:164:164,0:164:5876:0:0:0,-49.3689,-528.932	0/0:261:261,0:261:9355:0:0:0,-78.5688,-841.655	0/1:158:130,28:130:4643:28:1008:-43.4713,0,-370.469	0/0:386:386,0:386:13782:0:0:0,-116.198,-1240.16	0/1:152:87,65:87:3116:65:2331:-164.24,0,-234.91	0/1:77:69,8:69:2467:8:288:-3.07497,0,-199.104	0/0:184:184,0:184:6584:0:0:0,-55.3895,-592.64	0/0:64:64,0:64:2291:0:0:0,-19.2659,-206.448	0/0:53:53,0:53:1879:0:0:0,-15.9546,-169.388	0/1:71:44,27:44:1576:27:972:-66.4248,0,-120.758	0/0:138:138,0:138:4908:0:0:0,-41.5421,-441.872	0/0:299:299,0:299:10689:0:0:0,-90.008,-961.918	0/0:130:130,0:130:4643:0:0:0,-39.1339,-418.033	0/1:172:89,83:89:3187:83:2978:-216.471,0,-235.273	0/0:157:157,0:157:5624:0:0:0,-47.2617,-505.724	0/0:1029:1029,0:1029:36803:0:0:0,-309.76,-3310.78	0/1:120:72,48:72:2575:48:1713:-118.328,0,-195.875	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/0:962:962,0:962:34413:0:0:0,-289.591,-3095.45	0/1:165:106,59:106:3804:59:2112:-140.617,0,-292.881	0/1:58:22,36:22:788:36:1281:-98.1315,0,-53.7851	0/0:463:463,0:463:16497:0:0:0,-139.377,-1484.39	0/0:1076:1074,0:1074:38366:0:0:0,-323.306,-3450.47	0/0:127:127,0:127:4540:0:0:0,-38.2308,-408.768	0/1:82:31,51:31:1116:51:1824:-139.757,0,-76.0672	0/0:712:710,2:710:25418:2:72:0,-207.497,-2280.06	0/0:135:135,0:135:4827:0:0:0,-40.639,-434.585	0/0:270:269,1:269:9620:1:36:0,-77.6798,-862.151	0/0:94:90,3:90:3216:3:108:0,-18.1681,-279.622	0/0:128:128,0:128:4579:0:0:0,-38.5318,-412.275	0/0:307:307,0:307:10956:0:0:0,-92.4162,-984.999	0/1:99:44,55:44:1565:55:1972:-147.923,0,-111.338	0/0:167:167,0:167:5939:0:0:0,-50.272,-534.62	0/0:81:81,0:81:2899:0:0:0,-24.3834,-261.145	0/1:74:29,45:29:1035:45:1616:-123.419,0,-71.1868	0/0:276:276,0:276:9843:0:0:0,-83.0843,-885.819	0/0:113:113,0:113:4047:0:0:0,-34.0164,-364.413	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.613	0/0:246:243,3:243:8646:3:108:0,-63.9782,-768.063	0/0:149:149,0:149:5334:0:0:0,-44.8535,-480.192	0/1:173:82,91:82:2931:91:3253:-240.907,0,-211.924	0/1:144:69,75:69:2467:75:2700:-199.893,0,-178.935	0/0:445:444,0:444:15879:0:0:0,-133.657,-1428.37	0/0:147:147,0:147:5248:0:0:0,-44.2514,-472.458	0/0:125:125,0:125:4462:0:0:0,-37.6287,-401.749	0/0:219:219,0:219:7803:0:0:0,-65.9256,-702.298	0/0:80:80,0:80:2864:0:0:0,-24.0824,-257.889	0/1:41:19,22:19:676:22:781:-58.2306,0,-48.8258	0/1:91:41,50:41:1476:50:1788:-133.691,0,-105.742	0/1:150:58,92:58:2058:92:3308:-252.782,0,-140.336	0/0:55:55,0:55:1956:0:0:0,-16.5566,-176.316	0/0:72:72,0:72:2564:0:0:0,-21.6742,-231.011	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/0:88:84,4:84:2986:4:144:0,-13.177,-255.658	0/1:241:211,30:211:7505:30:1076:-24.4143,0,-602.943	0/1:49:12,37:12:423:37:1324:-104.697,0,-23.6546	0/0:95:95,0:95:3408:0:0:0,-28.5978,-306.92	0/0:67:67,0:67:2400:0:0:0,-20.169,-216.257
chr03	9216114	.	G	T	42750.7	PASS	AB=0.425;ABP=231.666;AC=28;AF=0.148936;AN=188;AO=2044;CIGAR=1X;DP=17626;DPB=17626;DPRA=1.29117;EPP=4441.5;EPPR=33828;GTI=0;LEN=1;MEANALT=1;MQM=59.8038;MQMR=59.98;NS=94;NUMALT=1;ODDS=36.9308;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72802;QR=548403;RO=15581;RPL=910;RPP=56.3155;RPPR=6896.52;RPR=1134;RUN=1;SAF=910;SAP=56.3155;SAR=1134;SRF=4273;SRP=6900.44;SRR=11308;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:47,18:47:1658:18:648:-39.0743,0,-129.939	0/1:109:61,48:61:2173:48:1712:-121.553,0,-163.022	0/1:97:57,40:57:2019:40:1432:-99.9419,0,-152.783	0/0:198:198,0:198:7004:0:0:0,-59.6039,-630.427	0/0:82:82,0:82:2914:0:0:0,-24.6845,-262.495	0/0:51:47,4:47:1668:4:140:0,-2.40795,-137.463	0/0:97:97,0:97:3428:0:0:0,-29.1999,-308.735	0/1:89:54,35:54:1902:35:1248:-85.8299,0,-144.665	0/0:145:145,0:145:5113:0:0:0,-43.6493,-460.309	0/0:101:100,1:100:3547:1:36:0,-26.8058,-315.843	0/0:431:430,1:430:15043:1:36:0,-126.146,-1349.94	0/1:202:101,101:101:3574:101:3606:-263.931,0,-261.051	0/1:127:73,54:73:2556:54:1940:-136.482,0,-192.06	0/0:164:164,0:164:5817:0:0:0,-49.3689,-523.645	0/0:140:140,0:140:4941:0:0:0,-42.1442,-444.843	0/0:111:111,0:111:3917:0:0:0,-33.4143,-352.727	0/0:105:105,0:105:3701:0:0:0,-31.6081,-333.293	0/0:85:85,0:85:3006:0:0:0,-25.5875,-270.773	0/0:155:155,0:155:5506:0:0:0,-46.6596,-495.67	0/0:235:234,1:234:8227:1:36:0,-67.1438,-736.854	0/0:248:248,0:248:8704:0:0:0,-74.6554,-783.364	0/1:82:36,46:36:1280:46:1625:-121.842,0,-90.8188	0/0:132:132,0:132:4652:0:0:0,-39.736,-418.845	0/0:92:92,0:92:3256:0:0:0,-27.6948,-293.261	0/0:110:110,0:110:3882:0:0:0,-33.1133,-349.577	0/1:255:148,107:148:5184:107:3835:-268.572,0,-389.943	0/0:272:272,0:272:9646:0:0:0,-81.8802,-868.093	0/0:65:64,1:64:2275:1:36:0,-15.9687,-201.414	0/1:235:108,127:108:3787:127:4529:-337.034,0,-270.288	0/0:145:137,8:137:4866:8:273:0,-18.7492,-413.193	0/0:130:130,0:130:4593:0:0:0,-39.1339,-413.539	0/0:268:262,6:262:9198:6:203:0,-62.0749,-809.205	0/0:516:516,0:516:18175:0:0:0,-155.331,-1635.38	0/0:227:227,0:227:7851:0:0:0,-68.3338,-706.63	0/0:1227:1225,2:1225:42742:2:72:0,-362.527,-3838.55	0/0:410:407,3:407:14204:3:108:0,-113.347,-1268.07	0/0:427:426,1:426:15003:1:36:0,-124.942,-1346.42	0/0:131:130,1:130:4613:1:36:0,-35.8367,-411.738	0/1:253:178,75:178:6248:75:2688:-165.983,0,-486.248	0/0:309:309,0:309:10892:0:0:0,-93.0183,-980.193	0/1:111:52,59:52:1836:59:2116:-157.289,0,-132.101	0/1:124:91,33:91:3225:33:1184:-69.534,0,-253.145	0/0:192:192,0:192:6740:0:0:0,-57.7978,-606.684	0/0:165:165,0:165:5802:0:0:0,-49.6699,-522.301	0/0:144:144,0:144:5065:0:0:0,-43.3483,-455.914	0/1:105:67,38:67:2334:38:1368:-91.7974,0,-178.71	0/0:120:120,0:120:4230:0:0:0,-36.1236,-380.88	0/0:159:159,0:159:5574:0:0:0,-47.8638,-501.786	0/0:99:99,0:99:3506:0:0:0,-29.802,-315.752	0/1:182:103,79:103:3626:79:2844:-201.384,0,-271.723	0/0:129:129,0:129:4560:0:0:0,-38.8329,-410.57	0/0:240:239,1:239:8432:1:21:0,-70.1473,-756.793	0/1:103:55,48:55:1947:48:1707:-122.902,0,-144.499	0/0:87:87,0:87:3035:0:0:0,-26.1896,-273.38	0/0:191:191,0:191:6705:0:0:0,-57.4967,-603.537	0/1:131:62,69:62:2195:69:2452:-181.364,0,-158.376	0/1:48:28,20:28:980:20:716:-50.3183,0,-74.0607	0/0:262:254,8:254:8924:8:284:0,-52.9665,-777.255	0/0:417:416,0:416:14534:0:0:0,-125.228,-1307.49	0/0:136:136,0:136:4830:0:0:0,-40.9401,-434.855	0/1:230:108,122:108:3819:122:4340:-321.501,0,-274.671	0/0:218:218,0:218:7676:0:0:0,-65.6245,-690.887	0/0:184:184,0:184:6525:0:0:0,-55.3895,-587.337	0/0:171:171,0:171:6118:0:0:0,-51.4761,-550.72	0/0:76:71,5:71:2515:5:180:0,-6.32621,-209.921	0/0:94:94,0:94:3309:0:0:0,-28.2968,-298.028	0/0:212:210,2:210:7447:2:72:0,-56.9816,-663.442	0/1:132:45,87:45:1572:87:3103:-239.744,0,-102.032	0/0:604:601,3:601:21158:3:108:0,-171.747,-1893.64	0/0:56:56,0:56:1999:0:0:0,-16.8577,-180.183	0/1:136:63,73:63:2222:73:2601:-193.38,0,-159.304	0/0:304:304,0:304:10599:0:0:0,-91.5131,-953.846	0/0:109:109,0:109:3819:0:0:0,-32.8123,-343.909	0/0:128:128,0:128:4501:0:0:0,-38.5318,-405.263	0/0:145:145,0:145:5111:0:0:0,-43.6493,-460.136	0/0:152:152,0:152:5393:0:0:0,-45.7566,-485.505	0/1:67:43,24:43:1528:24:830:-54.8373,0,-117.644	0/1:146:50,96:50:1753:96:3414:-263.518,0,-113.911	0/0:122:117,5:117:4162:5:172:0,-20.9077,-358.946	0/0:91:90,1:90:3203:1:36:0,-23.7955,-284.896	0/0:109:109,0:109:3824:0:0:0,-32.8123,-344.341	0/0:177:177,0:177:6226:0:0:0,-53.2823,-560.441	0/0:148:148,0:148:5275:0:0:0,-44.5524,-474.831	0/1:157:80,77:80:2815:77:2760:-201.348,0,-206.327	0/1:150:81,69:81:2838:69:2448:-175.409,0,-210.504	0/1:349:176,173:176:6188:173:6137:-447.368,0,-451.965	0/0:65:65,0:65:2292:0:0:0,-19.5669,-206.54	0/0:188:188,0:188:6634:0:0:0,-56.5936,-597.148	0/0:155:154,1:154:5418:1:36:0,-43.0614,-484.158	0/1:120:75,45:75:2655:45:1597:-107.723,0,-203.074	0/1:731:596,135:596:20949:135:4770:-209.383,0,-1664.88	0/1:144:53,91:53:1874:91:3231:-247.647,0,-125.589	0/0:102:102,0:102:3590:0:0:0,-30.7051,-323.309	0/0:186:186,0:186:6551:0:0:0,-55.9916,-589.68
chr03	9796101	.	G	A	13288	PASS	AB=0.513427;ABP=5.45945;AC=33;AF=0.175532;AN=188;AO=805;CIGAR=1X;DP=4341;DPB=4341;DPRA=1.02198;EPP=1751.05;EPPR=7668.31;GTI=0;LEN=1;MEANALT=1.05882;MQM=52.1553;MQMR=59.9179;NS=94;NUMALT=1;ODDS=3.2182;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=28889;QR=126213;RO=3534;RPL=0;RPP=1751.05;RPPR=7676.99;RPR=805;RUN=1;SAF=805;SAP=1751.05;SAR=0;SRF=3533;SRP=7668.31;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:22:5,17:5:180:17:608:-47.19,0,-9.9294	0/1:70:43,27:43:1544:27:972:-65.7651,0,-118.181	0/1:33:14,19:14:504:19:675:-50.4333,0,-35.7595	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.088	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/0:51:51,0:51:1824:0:0:0,-15.3525,-164.313	0/1:37:17,20:17:608:20:720:-52.5244,0,-43.9139	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.126	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/1:38:22,16:22:792:16:557:-38.6827,0,-60.1665	0/1:56:20,36:20:688:36:1296:-99.2771,0,-45.3799	0/0:55:55,0:55:1955:0:0:0,-16.5566,-176.22	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/0:63:63,0:63:2247:0:0:0,-18.9649,-202.492	0/0:49:49,0:49:1752:0:0:0,-14.7505,-157.964	0/0:41:41,0:41:1460:0:0:0,-12.3422,-131.696	0/0:81:81,0:81:2897:0:0:0,-24.3834,-260.964	0/0:66:66,0:66:2334:0:0:0,-19.868,-210.309	0/1:49:16,33:16:572:33:1188:-90.8073,0,-37.063	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:78:36,42:36:1292:42:1512:-111.982,0,-93.1034	0/0:82:82,0:82:2910:0:0:0,-24.6845,-262.133	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5128	0/1:59:29,30:29:1040:30:1065:-77.5136,0,-76.1536	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:7:2,5:2:72:5:180:-14.4214,0,-4.72951	0/0:8:8,0:8:273:0:0:0,-2.40824,-24.9002	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.4756	0/1:8:6,2:6:201:2:72:-3.60092,0,-16.0088	0/0:102:102,0:102:3664:0:0:0,-30.7051,-329.951	0/0:90:90,0:90:3205:0:0:0,-27.0927,-288.672	0/1:54:28,26:28:1000:26:936:-67.5396,0,-74.0598	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:94:38,56:38:1360:56:2000:-150.068,0,-94.4029	0/1:26:15,11:15:540:11:396:-27.9808,0,-41.1098	0/0:60:60,0:60:2129:0:0:0,-18.0618,-191.877	0/0:46:46,0:46:1628:0:0:0,-13.8474,-146.806	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/1:30:18,12:18:621:12:428:-29.8123,0,-47.1794	0/0:38:38,0:38:1353:0:0:0,-11.4391,-122.068	0/0:59:59,0:59:2097:0:0:0,-17.7608,-188.998	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/1:64:25,39:25:892:39:1404:-107.048,0,-61.3338	0/0:78:78,0:78:2787:0:0:0,-23.4803,-251.066	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:77:37,40:37:1317:40:1440:-105.068,0,-95.6505	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.056	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/1:80:37,43:37:1324:43:1544:-114.649,0,-95.3715	0/1:12:6,6:6:216:6:212:-15.4488,0,-16.1782	0/1:9:6,3:6:216:3:108:-7.36308,0,-17.0812	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/1:47:28,18:28:1004:18:648:-44.2304,0,-76.469	0/1:9:6,3:6:216:3:108:-7.35863,0,-17.0812	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.658	0/0:64:64,0:64:2273:0:0:0,-19.2659,-204.831	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/0:34:34,0:34:1220:0:0:0,-10.235,-109.917	0/0:76:76,0:76:2705:0:0:0,-22.8783,-243.693	0/1:80:28,51:28:1000:51:1828:-140.007,0,-66.1745	0/0:28:26,2:26:932:2:72:0,-1.83649,-77.6065	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1179	0/1:51:24,27:24:864:27:968:-71.9902,0,-62.73	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9361	0/0:53:53,0:53:1870:0:0:0,-15.9546,-168.385	0/0:36:36,0:36:1281:0:0:0,-10.8371,-115.591	0/0:52:52,0:52:1849:0:0:0,-15.6536,-166.688	0/0:91:91,0:91:3268:0:0:0,-27.3937,-294.34	0/1:41:22,19:22:788:19:684:-47.3077,0,-58.8898	0/1:72:37,35:37:1320:35:1260:-91.1826,0,-97.4278	0/1:22:7,15:7:252:15:540:-41.66,0,-16.4063	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.784	0/0:51:51,0:51:1809:0:0:0,-15.3525,-163.061	0/0:86:86,0:86:3053:0:0:0,-25.8886,-274.995	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.393	0/1:36:19,17:19:672:17:612:-44.321,0,-49.9606	0/1:58:33,25:33:1184:25:900:-63.5981,0,-89.4086	0/1:77:38,39:38:1360:39:1404:-102.941,0,-99.5167	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9522	0/0:48:48,0:48:1719:0:0:0,-14.4494,-154.995	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.709	0/1:58:32,26:32:1137:26:936:-66.4615,0,-85.1772	0/1:84:50,34:50:1792:34:1224:-83.525,0,-136.276	0/1:26:15,11:15:540:11:392:-27.4567,0,-41.1098	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.468
chr03	9796116	.	C	T	13034.1	PASS	AB=0.509994;ABP=4.35574;AC=33;AF=0.175532;AN=188;AO=796;CIGAR=1X;DP=4340;DPB=4340;DPRA=1.05292;EPP=1731.5;EPPR=7209.41;GTI=0;LEN=1;MEANALT=1.02703;MQM=52.3153;MQMR=59.9165;NS=94;NUMALT=1;ODDS=2.81981;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=28522;QR=126421;RO=3543;RPL=0;RPP=1731.5;RPPR=7201;RPR=796;RUN=1;SAF=796;SAP=1731.5;SAR=0;SRF=3542;SRP=7687.85;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:21:5,16:5:171:16:576:-44.8371,0,-9.40382	0/1:68:41,27:41:1467:27:968:-66.1097,0,-111.855	0/1:33:14,19:14:504:19:684:-50.9342,0,-35.7595	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.503	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:51:51,0:51:1820:0:0:0,-15.3525,-163.99	0/1:38:19,19:19:671:19:684:-49.9256,0,-49.2767	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:47:47,0:47:1675:0:0:0,-14.1484,-151.035	0/0:45:45,0:45:1603:0:0:0,-13.5463,-144.559	0/1:36:22,14:22:792:14:500:-34.1908,0,-60.7686	0/1:56:21,35:21:752:35:1252:-95.4239,0,-51.1486	0/0:53:53,0:53:1888:0:0:0,-15.9546,-170.194	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/0:42:42,0:42:1496:0:0:0,-12.6433,-134.935	0/0:64:64,0:64:2284:0:0:0,-19.2659,-205.813	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.203	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:81:80,1:80:2852:1:36:0,-20.7852,-253.32	0/0:65:65,0:65:2315:0:0:0,-19.5669,-208.602	0/1:48:15,33:15:532:33:1179:-90.2978,0,-33.7636	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4777	0/1:77:35,42:35:1252:42:1508:-111.923,0,-89.8058	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.834	0/0:31:31,0:31:1100:0:0:0,-9.33193,-99.3101	0/1:59:29,30:29:1036:30:1072:-78.1465,0,-75.7931	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.937	0/1:7:2,5:2:68:5:180:-14.4214,0,-4.3505	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:8:8,0:8:280:0:0:0,-2.40824,-25.5393	0/0:22:22,0:22:776:0:0:0,-6.62266,-70.105	0/1:8:6,2:6:203:2:72:-3.60092,0,-16.1929	0/0:101:101,0:101:3620:0:0:0,-30.404,-325.993	0/0:95:95,0:95:3373:0:0:0,-28.5978,-303.782	0/1:53:27,26:27:968:26:936:-67.8406,0,-71.4828	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:95:38,57:38:1360:57:2040:-153.404,0,-94.1027	0/1:25:15,10:15:540:10:360:-25.174,0,-41.4108	0/0:60:60,0:60:2131:0:0:0,-18.0618,-192.058	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/1:30:18,12:18:644:12:432:-30.1742,0,-49.2588	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:58:58,0:58:2063:0:0:0,-17.4597,-185.94	0/0:47:47,0:47:1679:0:0:0,-14.1484,-151.396	0/1:67:27,40:27:972:40:1440:-109.381,0,-67.6005	0/0:78:77,1:77:2756:1:36:0,-19.8872,-244.689	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:75:37,38:37:1319:38:1368:-99.429,0,-96.4339	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.844	0/0:28:28,0:28:996:0:0:0,-8.42884,-89.9549	0/1:76:33,42:33:1171:42:1485:-110.502,0,-82.7516	0/1:11:6,5:6:212:5:180:-12.7158,0,-16.1135	0/1:10:7,3:7:248:3:108:-7.06205,0,-19.6539	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:37:37,0:37:1311:0:0:0,-11.1381,-118.291	0/1:47:28,19:28:1008:19:680:-47.1653,0,-76.8879	0/1:9:6,3:6:216:3:108:-7.35863,0,-17.0812	0/0:62:62,0:62:2215:0:0:0,-18.6639,-199.609	0/0:64:64,0:64:2288:0:0:0,-19.2659,-206.182	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:35:35,0:35:1243:0:0:0,-10.536,-112.087	0/0:75:75,0:75:2680:0:0:0,-22.5772,-241.445	0/1:80:29,51:29:1031:51:1836:-140.784,0,-69.0202	0/0:27:25,2:25:896:2:68:0,-1.7876,-74.6201	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5951	0/1:53:26,27:26:932:27:945:-69.3158,0,-68.2443	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.813	0/0:55:55,0:55:1945:0:0:0,-16.5566,-175.134	0/0:35:35,0:35:1239:0:0:0,-10.536,-111.813	0/0:52:52,0:52:1834:0:0:0,-15.6536,-165.339	0/0:91:91,0:91:3252:0:0:0,-27.3937,-292.902	0/1:40:22,18:22:780:18:648:-44.4395,0,-58.469	0/1:69:35,34:35:1234:34:1224:-88.8553,0,-90.5916	0/1:22:7,15:7:252:15:534:-41.2507,0,-16.4063	0/0:64:64,0:64:2275:0:0:0,-19.2659,-205.012	0/0:52:52,0:52:1863:0:0:0,-15.6536,-167.895	0/0:84:84,0:84:2994:0:0:0,-25.2865,-269.562	0/0:59:59,0:59:2112:0:0:0,-17.7608,-190.321	0/1:36:19,17:19:654:17:612:-44.321,0,-48.3401	0/1:58:33,25:33:1167:25:896:-63.2542,0,-87.8767	0/1:74:37,37:37:1310:37:1328:-97.0795,0,-95.9239	0/0:25:24,1:24:860:1:36:0,-3.92747,-74.1154	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/0:59:59,0:59:2107:0:0:0,-17.7608,-189.899	0/1:60:34,26:34:1220:26:936:-65.8594,0,-92.045	0/1:84:51,33:51:1828:33:1188:-80.514,0,-139.514	0/1:26:15,11:15:527:11:387:-27.0032,0,-39.9334	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:61:61,0:61:2176:0:0:0,-18.3628,-196.104
chr03	10120566	.	T	A	28713.4	PASS	AB=0.560201;ABP=103.146;AC=32;AF=0.170213;AN=188;AO=1794;CIGAR=1X;DP=8411;DPB=8411;DPRA=1.27164;EPP=3769.43;EPPR=13731.7;GTI=2;LEN=1;MEANALT=1.02632;MQM=39.3255;MQMR=59.9648;NS=94;NUMALT=1;ODDS=0.373295;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63851;QR=236877;RO=6615;RPL=15;RPP=3769.43;RPPR=13731.7;RPR=1779;RUN=1;SAF=1794;SAP=3898.63;SAR=0;SRF=6615;SRP=14367.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:21:14,7:14:500:7:242:-14.9558,0,-39.0145	0/1:139:26,113:26:936:113:4011:-305.06,0,-42.7163	0/1:113:60,53:60:2152:53:1890:-129.115,0,-159.931	0/0:159:159,0:159:5704:0:0:0,-47.8638,-513.476	0/0:27:27,0:27:948:0:0:0,-8.12781,-85.6319	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.818	0/0:81:81,0:81:2895:0:0:0,-24.3834,-260.786	0/1:135:52,83:52:1853:83:2949:-213.989,0,-126.395	0/0:61:61,0:61:2177:0:0:0,-18.3628,-196.191	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/0:65:65,0:65:2312:0:0:0,-19.5669,-208.338	0/1:95:46,48:46:1656:48:1708:-118.247,0,-120.711	0/1:76:33,43:33:1184:43:1540:-111.573,0,-83.99	0/0:97:96,1:96:3452:1:25:0,-26.8189,-308.51	0/0:62:62,0:62:2232:0:0:0,-18.6639,-201.144	0/0:63:63,0:63:2268:0:0:0,-18.9649,-204.382	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:183:183,0:183:6559:0:0:0,-55.0885,-590.384	0/0:138:138,0:138:4940:0:0:0,-41.5421,-444.75	0/1:128:35,93:35:1256:93:3305:-243.798,0,-74.8134	0/0:92:92,0:92:3304:0:0:0,-27.6948,-297.48	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5288	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.123	0/1:308:128,180:128:4568:180:6389:-450.274,0,-318.567	0/0:205:205,0:205:7315:0:0:0,-61.7111,-658.399	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/1:241:129,112:129:4623:112:3958:-262.748,0,-343.684	0/0:139:134,5:134:4808:5:180:0,-26.6133,-417.644	0/0:104:104,0:104:3736:0:0:0,-31.3071,-336.439	0/1:16:4,12:4:129:12:424:-32.2591,0,-7.11118	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.3154	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:6:3,3:3:108:3:108:-8.04605,0,-8.26899	0/0:195:195,0:195:6995:0:0:0,-58.7008,-629.611	0/0:133:130,3:130:4641:3:108:0,-30.3644,-408.179	0/1:59:22,37:22:788:37:1324:-96.5507,0,-53.484	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:134:54,80:54:1919:80:2859:-205.71,0,-132.648	0/1:24:12,12:12:432:12:432:-29.7768,0,-31.9965	0/0:162:162,0:162:5790:0:0:0,-48.7669,-521.214	0/0:43:42,1:42:1504:1:36:0,-9.52069,-132.231	0/0:45:45,0:45:1597:0:0:0,-13.5463,-144.018	0/1:65:45,20:45:1612:20:693:-39.2094,0,-125.646	0/0:109:108,0:108:3867:0:0:0,-32.5112,-347.862	0/0:191:191,0:191:6852:0:0:0,-57.4967,-616.748	0/0:99:99,0:99:3560:0:0:0,-29.802,-320.607	0/1:175:77,98:77:2772:98:3462:-242.961,0,-197.04	0/0:115:115,0:115:4116:0:0:0,-34.6184,-370.625	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:158:89,69:89:3192:69:2448:-163.173,0,-239.94	0/0:91:91,0:91:3247:0:0:0,-27.3937,-292.451	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:126:71,55:71:2539:55:1960:-131.269,0,-190.831	0/1:4:2,2:2:72:2:68:-5.08843,0,-5.6326	0/1:10:7,3:7:252:3:108:-6.57578,0,-20.0187	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:67:67,0:67:2399:0:0:0,-20.169,-216.161	0/1:138:54,84:54:1940:84:3003:-213.249,0,-133.334	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:220:219,1:219:7843:1:36:0,-62.803,-702.313	0/0:191:191,0:191:6839:0:0:0,-57.4967,-615.579	0/0:83:82,1:82:2925:1:36:0,-21.5619,-260.06	0/0:94:94,0:94:3380:0:0:0,-28.2968,-304.413	0/0:151:151,0:151:5405:0:0:0,-45.4555,-486.579	0/1:122:56,66:56:2012:66:2345:-163.722,0,-144.627	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/0:26:26,0:26:919:0:0:0,-7.82678,-83.0262	0/1:82:24,58:24:864:58:2084:-151.513,0,-53.3981	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5561	0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.705	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.147	0/0:122:122,0:122:4356:0:0:0,-36.7257,-392.214	0/0:146:146,0:146:5240:0:0:0,-43.9504,-471.73	0/1:141:55,86:55:1963:86:3084:-223.076,0,-134.494	0/1:109:56,53:56:2007:53:1884:-130.818,0,-148.09	0/1:21:12,9:12:432:9:320:-21.9174,0,-32.8996	0/0:96:96,0:96:3427:0:0:0,-28.8989,-308.644	0/0:133:133,0:133:4759:0:0:0,-40.037,-428.464	0/0:200:200,0:200:7138:0:0:0,-60.206,-642.347	0/0:55:55,0:55:1972:0:0:0,-16.5566,-177.755	0/1:62:29,33:29:1044:33:1188:-83.039,0,-75.6109	0/1:64:12,52:12:428:52:1855:-139.884,0,-19.5929	0/1:135:55,80:55:1980:80:2856:-201.172,0,-137.835	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:72:72,0:72:2564:0:0:0,-21.6742,-231.008	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/1:60:32,28:32:1148:28:1008:-69.019,0,-85.5634	0/1:151:85,66:85:3047:66:2364:-156.316,0,-228.995	0/1:63:19,44:19:684:44:1561:-113.349,0,-42.9254	0/0:154:154,0:154:5517:0:0:0,-46.3586,-496.648	0/0:93:93,0:93:3335:0:0:0,-27.9958,-300.36
chr03	10120575	.	TGGCATT	GGGTATT,GGGTATG	179320	PASS	AB=0.438586,0.555211;ABP=108.631,88.3713;AC=156,32;AF=0.829787,0.170213;AN=188;AO=6700,1801;CIGAR=1X2M1X3M,1X2M1X2M1X;DP=8567;DPB=8567.14;DPRA=0,1.18234;EPP=14543.2,3913.83;EPPR=7.35324;GTI=2;LEN=7,7;MEANALT=2.04255,2.64865;MQM=59.9673,39.276;MQMR=60;NS=94;NUMALT=2;ODDS=1.38829;PAIRED=0,0;PAIREDR=0;PAO=1,1;PQA=34,34;PQR=0;PRO=0;QA=235845,63238;QR=72;RO=2;RPL=6699,1801;RPP=14543.2,3913.83;RPPR=7.35324;RPR=1,0;RUN=1,1;SAF=6700,1801;SAP=14551.9,3913.83;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:21:0,14,7:0:0:14,7:495,239:-59.0784,-18.744,-14.5296,-40.6693,0,-38.5621	1/2:139:0,26,113:0:0:26,113:926,3967:-384.722,-309.243,-301.416,-75.8312,0,-41.8148	1/2:111:0,60,49:0:0:60,49:2085,1703:-302.026,-132.51,-114.448,-169.525,0,-154.775	1/1:160:0,158,0:0:0:158,0:5563,0:-500.467,-47.5627,0,-500.467,-47.5627,-500.467	1/1:27:0,27,0:0:0:27,0:943,0:-85.1825,-8.12781,0,-85.1825,-8.12781,-85.1825	1/1:40:0,40,0:0:0:40,0:1390,0:-125.394,-12.0412,0,-125.394,-12.0412,-125.394	1/1:85:0,84,0:0:0:84,0:2944,0:-264.835,-25.2865,0,-264.835,-25.2865,-264.835	1/2:138:0,50,85:0:0:50,85:1738,2984:-374.19,-232.885,-217.834,-141.302,0,-115.715	1/1:62:0,61,0:0:0:61,0:2137,0:-192.321,-18.3628,0,-192.321,-18.3628,-192.321	1/1:73:0,72,0:0:0:72,0:2526,0:-227.32,-21.6742,0,-227.32,-21.6742,-227.32	1/1:65:0,64,0:0:0:64,0:2236,0:-201.145,-19.2659,0,-201.145,-19.2659,-201.145	1/2:96:0,48,46:0:0:48,46:1708,1607:-264.163,-124.952,-110.502,-139.257,0,-125.41	1/2:77:0,33,44:0:0:33,44:1180,1542:-217.279,-121.053,-111.119,-96.5746,0,-83.3292	1/1:99:0,97,0:0:0:97,0:3400,0:-305.905,-29.1999,0,-305.905,-29.1999,-305.905	1/1:63:0,63,0:0:0:63,0:2232,0:-201.143,-18.9649,0,-201.143,-18.9649,-201.143	1/1:64:0,64,0:0:0:64,0:2250,0:-202.763,-19.2659,0,-202.763,-19.2659,-202.763	1/1:53:0,53,0:0:0:53,0:1890,0:-170.378,-15.9546,0,-170.378,-15.9546,-170.378	1/1:36:0,36,0:0:0:36,0:1272,0:-114.782,-10.8371,0,-114.782,-10.8371,-114.782	1/1:18:0,17,0:0:0:17,0:610,0:-54.8731,-5.11751,0,-54.8731,-5.11751,-54.8731	1/1:187:0,187,0:0:0:187,0:6587,0:-592.912,-56.2926,0,-592.912,-56.2926,-592.912	1/1:143:0,143,0:0:0:143,0:5058,0:-455.369,-43.0473,0,-455.369,-43.0473,-455.369	1/2:129:0,36,93:0:0:36,93:1270,3280:-356.188,-252.771,-241.934,-103.765,0,-75.7692	1/1:94:0,92,1:0:0:92,1:3210,32:-288.711,-27.6948,0,-286.136,-25.1386,-285.834	1/1:19:0,19,0:0:0:19,0:676,0:-61.1677,-5.71957,0,-61.1677,-5.71957,-61.1677	1/1:44:0,43,0:0:0:43,0:1514,0:-136.185,-12.9443,0,-136.185,-12.9443,-136.185	1/2:317:0,134,182:0:0:134,182:4689,6364:-870.795,-489.3,-448.962,-381.578,0,-326.791	1/1:209:0,208,0:0:0:208,0:7300,0:-656.851,-62.6142,0,-656.851,-62.6142,-656.851	1/1:31:0,31,0:0:0:31,0:1094,0:-98.7694,-9.33193,0,-98.7694,-9.33193,-98.7694	1/2:244:0,131,112:0:0:131,112:4608,3959:-676.762,-301.65,-262.215,-375.094,0,-341.379	1/1:142:0,136,5:0:0:136,5:4805,180:-432.271,-40.9401,0,-418.878,-27.5704,-417.373	1/1:105:0,105,0:0:0:105,0:3724,0:-335.363,-31.6082,0,-335.363,-31.6082,-335.363	1/2:16:0,4,12:0:0:4,12:143,422:-45.0039,-33.3393,-32.1352,-12.0173,0,-8.40496	1/1:29:0,29,0:0:0:29,0:1021,0:-92.2022,-8.72987,0,-92.2022,-8.72987,-92.2022	1/1:13:0,13,0:0:0:13,0:451,0:-40.9201,-3.91339,0,-40.9201,-3.91339,-40.9201	1/1:10:0,10,0:0:0:10,0:351,0:-31.9273,-3.0103,0,-31.9273,-3.0103,-31.9273	1/2:6:0,3,3:0:0:3,3:104,101:-16.871,-8.41087,-7.50778,-8.79971,0,-7.89662	1/1:199:0,199,0:0:0:199,0:7005,0:-630.523,-59.905,0,-630.523,-59.905,-630.523	1/1:132:0,128,3:0:0:128,3:4549,107:-409.263,-38.5318,0,-400.906,-30.0895,-400.002	1/2:59:0,22,37:0:0:22,37:754,1303:-162.777,-101.565,-94.9419,-61.5535,0,-50.4154	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:140:0,54,84:0:0:54,84:1912,2976:-386.915,-231.162,-214.906,-155.8,0,-130.513	1/2:24:0,12,12:0:0:12,12:415,426:-66.706,-32.9794,-29.367,-34.0674,0,-30.455	1/1:168:0,165,0:0:0:165,0:5834,0:-524.842,-49.67,0,-524.842,-49.67,-524.842	1/1:44:0,42,1:0:0:42,1:1496,35:-134.586,-12.6433,0,-131.868,-9.93743,-131.567	1/1:44:0,44,0:0:0:44,0:1548,0:-139.611,-13.2453,0,-139.611,-13.2453,-139.611	1/2:64:0,44,18:0:0:44,18:1553,615:-173.433,-46.9836,-33.7383,-126.5,0,-121.081	1/1:111:0,111,0:0:0:111,0:3900,0:-351.193,-33.4143,0,-351.193,-33.4143,-351.193	1/1:199:0,196,0:0:0:196,0:6868,0:-617.86,-59.0019,0,-617.86,-59.0019,-617.86	1/1:99:0,97,0:0:0:97,0:3415,0:-307.25,-29.1999,0,-307.25,-29.1999,-307.25	1/2:180:0,77,102:0:0:77,102:2749,3603:-501.282,-277.156,-253.977,-224.114,0,-193.409	1/1:120:0,118,0:0:0:118,0:4142,0:-372.667,-35.5215,0,-372.667,-35.5215,-372.667	1/1:17:0,17,0:0:0:17,0:610,0:-55.2329,-5.11751,0,-55.2329,-5.11751,-55.2329	1/2:160:0,89,69:0:0:89,69:3152,2440:-446.106,-189.337,-162.546,-256.755,0,-235.983	1/1:92:0,91,0:0:0:91,0:3182,0:-286.2,-27.3937,0,-286.2,-27.3937,-286.2	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/2:130:0,73,57:0:0:73,57:2527,1972:-359.557,-154.191,-132.216,-205.705,0,-188.547	1/2:4:0,2,2:0:0:2,2:72,72:-11.8595,-5.9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chr03	10120588	.	A	G	27328.2	PASS	AB=0.554255;ABP=83.8302;AC=32;AF=0.170213;AN=188;AO=1764;CIGAR=1X;DP=8431;DPB=8431;DPRA=1.25565;EPP=3833.49;EPPR=14467.2;GTI=2;LEN=1;MEANALT=1.13514;MQM=39.2857;MQMR=59.9529;NS=94;NUMALT=1;ODDS=2.23574;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62619;QR=238383;RO=6661;RPL=1764;RPP=3833.49;RPPR=14467.2;RPR=0;RUN=1;SAF=1764;SAP=3833.49;SAR=0;SRF=6661;SRP=14467.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:20:14,6:14:504:6:212:-12.8187,0,-39.6775	0/1:138:26,112:26:928:112:3994:-303.595,0,-42.2961	0/1:108:61,47:61:2188:47:1651:-110.298,0,-164.674	0/0:160:160,0:160:5716:0:0:0,-48.1648,-514.559	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:84:84,0:84:2988:0:0:0,-25.2865,-269.154	0/1:131:51,80:51:1828:80:2826:-204.773,0,-125.339	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.173	0/0:72:72,0:72:2576:0:0:0,-21.6742,-232.089	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/1:93:47,46:47:1684:46:1619:-111.115,0,-123.851	0/1:76:33,43:33:1180:43:1519:-109.509,0,-83.6298	0/0:99:99,0:99:3539:0:0:0,-29.802,-318.092	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.663	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.901	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:184:184,0:184:6604:0:0:0,-55.3895,-594.432	0/0:141:141,0:141:5039:0:0:0,-42.4452,-453.656	0/1:128:34,92:34:1224:92:3281:-241.222,0,-72.1774	0/0:93:93,0:93:3316:0:0:0,-27.9958,-298.644	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:44:44,0:44:1568:0:0:0,-13.2453,-141.403	0/1:306:130,176:130:4660:176:6288:-442.839,0,-327.446	0/0:207:207,0:207:7408:0:0:0,-62.3132,-666.766	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/1:239:131,107:131:4692:107:3831:-251.546,0,-350.453	0/0:142:137,5:137:4924:5:180:0,-27.5164,-428.079	0/0:103:103,0:103:3700:0:0:0,-31.0061,-333.201	0/1:16:4,12:4:144:12:428:-32.5483,0,-8.49714	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:10:10,0:10:347:0:0:0,-3.0103,-31.5636	0/1:6:3,3:3:108:3:108:-8.04951,0,-8.26553	0/0:195:195,0:195:7004:0:0:0,-58.7008,-630.42	0/0:131:128,3:128:4587:3:104:0,-30.0595,-403.618	0/1:59:22,36:22:776:36:1279:-92.651,0,-52.3541	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:139:54,85:54:1923:85:3024:-218.628,0,-131.503	0/1:24:12,12:12:419:12:432:-29.7768,0,-30.818	0/0:165:165,0:165:5912:0:0:0,-49.6699,-532.188	0/0:44:43,1:43:1540:1:36:0,-9.82172,-135.469	0/0:45:45,0:45:1587:0:0:0,-13.5463,-143.12	0/1:63:44,19:44:1569:19:668:-37.6598,0,-122.377	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.551	0/0:194:194,0:194:6947:0:0:0,-58.3998,-625.209	0/0:98:98,0:98:3497:0:0:0,-29.5009,-314.94	0/1:180:77,103:77:2764:103:3677:-259.568,0,-194.816	0/0:112:112,0:112:3991:0:0:0,-33.7154,-359.381	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:157:89,68:89:3188:68:2426:-161.931,0,-239.882	0/0:91:91,0:91:3264:0:0:0,-27.3937,-293.753	0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7255	0/1:126:71,55:71:2544:55:1953:-130.801,0,-191.281	0/1:4:2,2:2:72:2:72:-5.37587,0,-5.6326	0/1:10:7,3:7:252:3:104:-6.29339,0,-20.0187	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.565	0/1:135:54,81:54:1932:81:2847:-202.698,0,-133.518	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:225:224,1:224:7989:1:36:0,-64.3081,-715.445	0/0:190:190,0:190:6824:0:0:0,-57.1957,-614.228	0/0:83:81,2:81:2899:2:72:0,-18.3147,-254.474	0/0:96:96,0:96:3428:0:0:0,-28.8989,-308.734	0/0:152:152,0:152:5421:0:0:0,-45.7566,-488.02	0/1:123:55,67:55:1972:67:2374:-165.573,0,-140.669	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:27:27,0:27:955:0:0:0,-8.12781,-86.2648	0/1:81:25,56:25:891:56:1977:-143.088,0,-56.1253	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:63:63,0:63:2247:0:0:0,-18.9649,-202.493	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.386	0/0:126:126,0:126:4501:0:0:0,-37.9298,-405.244	0/0:144:144,0:144:5137:0:0:0,-43.3483,-462.471	0/1:138:54,83:54:1935:83:2963:-213.742,0,-132.823	0/1:108:56,52:56:1996:52:1821:-126.146,0,-147.403	0/1:21:12,9:12:432:9:324:-22.2201,0,-32.8996	0/0:96:96,0:96:3440:0:0:0,-28.8989,-309.813	0/0:132:132,0:132:4707:0:0:0,-39.736,-423.788	0/0:199:199,0:199:7132:0:0:0,-59.905,-641.801	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/1:63:29,34:29:1025:34:1190:-83.3451,0,-73.5958	0/1:63:12,51:12:432:51:1801:-135.285,0,-20.2563	0/1:133:55,78:55:1971:78:2728:-192.596,0,-137.627	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/1:59:32,27:32:1135:27:964:-65.997,0,-84.6927	0/1:153:87,66:87:3128:66:2335:-153.927,0,-235.675	0/1:61:20,41:20:716:41:1475:-106.956,0,-46.4049	0/0:156:156,0:156:5577:0:0:0,-46.9607,-502.047	0/0:95:95,0:95:3397:0:0:0,-28.5978,-305.943
chr03	11258341	.	AC	GA	12258.5	PASS	AB=0.226261;ABP=4478.96;AC=45;AF=0.239362;AN=188;AO=1601;CIGAR=2X;DP=13407;DPB=13408;DPRA=1.21651;EPP=3479.54;EPPR=5041.5;GTI=19;LEN=2;MEANALT=1.61111;MQM=59.8089;MQMR=46.5899;NS=94;NUMALT=1;ODDS=0.878;PAIRED=0;PAIREDR=0;PAO=2;PQA=72;PQR=0;PRO=0;QA=54582;QR=410446;RO=11685;RPL=0;RPP=3479.54;RPPR=25368;RPR=1601;RUN=1;SAF=0;SAP=3479.54;SAR=1601;SRF=3240;SRP=5037.63;SRR=8445;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:140:140,0:140:4883:0:0:0,-42.1442,-433.759	0/0:146:146,0:146:5153:0:0:0,-43.9504,-457.604	0/1:207:175,32:175:6099:32:1067:-34.0139,0,-479.663	0/1:208:158,48:158:5550:48:1568:-79.0617,0,-426.049	0/1:142:119,22:119:4200:22:773:-27.1937,0,-329.955	0/1:159:141,15:141:4913:15:532:-0.976156,0,-388.52	0/0:136:136,0:136:4749:0:0:0,-40.9401,-419.312	0/1:277:198,73:198:6992:73:2506:-143.891,0,-538.345	0/1:140:125,15:125:4402:15:500:-3.17153,0,-347.259	0/0:108:108,0:108:3820:0:0:0,-32.5112,-337.699	0/1:146:121,25:121:4276:25:833:-31.3234,0,-334.194	0/0:286:286,0:286:10001:0:0:0,-86.0946,-884.621	0/1:208:177,31:177:6186:31:1076:-34.5321,0,-484.12	0/1:256:220,33:220:7726:33:1146:-26.956,0,-604.782	0/0:151:148,0:148:5233:0:0:0,-44.5524,-460.047	0/0:177:161,12:161:5637:12:414:0,-14.7864,-460.4	0/0:134:133,0:133:4648:0:0:0,-40.037,-408.768	0/1:137:115,22:115:4071:22:739:-25.0884,0,-317.205	0/0:88:86,0:86:3019:0:0:0,-25.8886,-267.7	0/0:94:94,0:94:3349:0:0:0,-28.2968,-297.572	0/1:188:118,70:118:4138:70:2326:-153.003,0,-311.313	0/0:76:76,0:76:2682:0:0:0,-22.8783,-238.128	0/0:146:144,0:144:5038:0:0:0,-43.3483,-447.135	0/1:147:110,34:110:3856:34:1152:-60.2671,0,-298.023	0/0:104:102,0:102:3571:0:0:0,-30.7051,-314.715	0/1:201:116,84:116:4011:84:2897:-200.354,0,-293.473	0/1:237:166,67:166:5872:67:2249:-131.848,0,-449.443	0/0:107:104,0:104:3686:0:0:0,-31.3071,-323.468	0/1:172:89,82:89:3125:82:2787:-198.212,0,-223.297	0/1:132:87,43:87:3040:43:1484:-94.3846,0,-230.321	0/1:190:136,53:136:4741:53:1819:-106.734,0,-359.666	0/1:4:3,1:3:108:1:34:-2.19479,0,-8.83803	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.8474	0/0:5:5,0:5:162:0:0:0,-1.50515,-14.4478	0/1:19:14,5:14:475:5:166:-9.54709,0,-37.0158	0/1:6:2,4:2:72:4:133:-9.9202,0,-4.87157	0/1:606:510,91:510:17970:91:3082:-96.0784,0,-1398.81	0/0:104:104,0:104:3620:0:0:0,-31.3071,-321.889	0/0:178:176,0:176:6197:0:0:0,-52.9813,-548.507	0/1:4:2,2:2:72:2:48:-3.35567,0,-5.60694	0/0:127:126,0:126:4416:0:0:0,-37.9298,-388.5	0/0:85:78,0:78:2743:0:0:0,-23.4803,-242.806	0/0:218:216,0:216:7612:0:0:0,-65.0225,-674.681	0/0:194:192,0:192:6753:0:0:0,-57.7978,-592.768	0/0:146:143,0:143:5012:0:0:0,-43.0473,-444.348	0/1:91:66,24:66:2313:24:807:-45.6139,0,-176.503	0/0:121:121,0:121:4242:0:0:0,-36.4246,-376.234	0/1:195:140,55:140:4921:55:1903:-112.485,0,-375.652	0/0:77:77,0:77:2661:0:0:0,-23.1793,-235.158	0/1:145:99,45:99:3525:45:1527:-94.0075,0,-265.739	0/0:92:92,0:92:3234:0:0:0,-27.6948,-283.801	0/1:5:2,3:2:61:3:108:-8.57002,0,-4.27342	0/1:166:119,45:119:4181:45:1520:-87.2998,0,-321.213	0/1:73:62,11:62:2167:11:388:-13.2824,0,-168.827	0/1:11:3,7:3:108:7:239:-18.4746,0,-6.63974	0/1:199:146,53:146:5134:53:1798:-102.193,0,-395.41	0/0:56:56,0:56:1970:0:0:0,-16.8577,-173.995	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.54684	0/0:8:8,0:8:286:0:0:0,-2.40824,-25.7333	0/0:143:143,0:143:5055:0:0:0,-43.0473,-447.438	0/1:243:189,50:189:6668:50:1739:-84.509,0,-519.992	0/0:6:6,0:6:211:0:0:0,-1.80618,-19.2033	0/0:77:77,0:77:2731:0:0:0,-23.1793,-241.187	0/0:118:116,2:116:4094:2:70:0,-28.8742,-358.001	0/0:72:70,2:70:2466:2:65:0,-15.5007,-212.184	0/1:41:26,15:26:912:15:493:-32.3401,0,-68.1994	0/1:223:192,27:192:6714:27:928:-17.602,0,-530.097	0/0:81:77,2:77:2715:2:70:0,-17.4813,-236.134	0/1:167:149,18:149:5285:18:618:-5.66774,0,-419.08	0/0:51:51,0:51:1810:0:0:0,-15.3525,-161.871	0/1:245:179,47:179:6254:47:1632:-78.8065,0,-480.745	0/1:26:14,11:14:498:11:383:-27.0374,0,-36.8849	0/0:118:118,0:118:4089:0:0:0,-35.5215,-364.333	0/0:80:80,0:80:2824:0:0:0,-24.0824,-251.854	0/1:273:202,69:202:6970:69:2309:-126.225,0,-537.69	0/0:164:162,0:162:5729:0:0:0,-48.7669,-508.354	0/0:161:161,0:161:5647:0:0:0,-48.4658,-502.582	0/1:103:47,56:47:1656:56:1929:-142.881,0,-116.709	0/1:14:10,4:10:350:4:140:-8.73016,0,-27.4753	0/0:131:130,1:130:4585:1:34:0,-36.036,-400.863	0/1:159:132,26:132:4622:26:871:-30.7751,0,-359.858	0/0:283:283,0:283:9888:0:0:0,-85.1915,-875.34	0/0:180:177,0:177:6193:0:0:0,-53.2823,-542.347	0/0:221:199,21:199:6981:21:709:0,-2.36679,-552.149	0/0:184:182,0:182:6358:0:0:0,-54.7875,-556.808	0/0:394:392,2:392:13790:2:70:0,-111.958,-1203.95	0/1:102:81,20:81:2888:20:691:-31.8319,0,-222.956	0/0:183:182,0:182:6370:0:0:0,-54.7875,-562.905	0/1:195:172,21:172:5996:21:720:-6.69928,0,-471.957	0/0:89:87,2:87:3099:2:70:0,-20.1443,-268.324	0/1:211:158,50:158:5524:50:1747:-94.6121,0,-427.912	0/1:199:154,45:154:5453:45:1565:-81.2343,0,-425.018	0/0:173:172,1:172:6055:1:36:0,-48.4799,-529.826	0/0:310:308,0:308:10924:0:0:0,-92.7172,-959.994
chr03	11258347	.	G	T	64511.1	PASS	AB=0.357699;ABP=2351.43;AC=93;AF=0.494681;AN=188;AO=4776;CIGAR=1X;DP=13357;DPB=13357;DPRA=28.714;EPP=10374;EPPR=1344.44;GTI=1;LEN=1;MEANALT=1.29032;MQM=45.5819;MQMR=49.5694;NS=94;NUMALT=1;ODDS=70.4221;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=170521;QR=304648;RO=8541;RPL=0;RPP=10374;RPPR=18117.8;RPR=4776;RUN=1;SAF=0;SAP=10374;SAR=4776;SRF=3170;SRP=1234.66;SRR=5371;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:139:59,80:59:2108:80:2864:-211.206,0,-145.288	0/1:142:75,67:75:2681:67:2404:-171.698,0,-193.828	0/1:203:124,79:124:4430:79:2828:-189.257,0,-334.792	0/1:201:144,57:144:5136:57:2048:-121.208,0,-392.31	0/1:142:78,63:78:2804:63:2264:-157.886,0,-207.237	0/1:155:75,77:75:2677:77:2741:-196.139,0,-193.143	0/1:136:64,72:64:2292:72:2560:-185.386,0,-160.363	0/1:276:166,110:166:5922:110:3929:-265.209,0,-446.632	0/1:140:100,40:100:3557:40:1424:-84.4733,0,-272.954	0/1:108:43,65:43:1533:65:2315:-173.916,0,-100.555	0/1:149:130,19:130:4620:19:680:-14.8314,0,-365.207	0/1:285:178,107:178:6294:107:3806:-250.506,0,-471.24	0/1:205:169,36:169:6031:36:1275:-50.2456,0,-473.114	0/1:252:184,67:184:6545:67:2404:-136.475,0,-503.39	0/1:152:127,25:127:4553:25:892:-33.2416,0,-351.798	0/1:178:128,49:128:4576:49:1760:-102.819,0,-348.772	0/1:125:95,30:95:3351:30:1080:-58.0401,0,-256.893	0/1:136:106,30:106:3771:30:1080:-55.2247,0,-290.927	0/1:86:68,18:68:2432:18:636:-30.9478,0,-189.836	0/1:92:42,50:42:1500:50:1796:-132.062,0,-105.426	0/1:186:122,64:122:4375:64:2284:-147.169,0,-335.977	0/1:73:27,46:27:968:46:1636:-122.952,0,-64.6207	0/1:145:56,88:56:1993:88:3160:-236.994,0,-133.384	0/1:146:94,52:94:3333:52:1868:-122.493,0,-252.603	0/1:104:69,34:69:2459:34:1216:-76.5699,0,-184.616	0/1:198:134,64:134:4785:64:2273:-140.162,0,-368.541	0/1:236:139,97:139:4975:97:3440:-234.569,0,-369.765	0/1:107:73,32:73:2605:32:1148:-69.6354,0,-195.63	0/1:174:105,69:105:3751:69:2472:-164.625,0,-283.28	0/1:132:81,49:81:2891:49:1756:-116.929,0,-218.448	0/1:188:127,60:127:4535:60:2130:-130.931,0,-343.313	0/1:4:1,3:1:36:3:108:-8.83803,0,-2.39415	0/1:7:4,3:4:140:3:108:-7.93494,0,-10.7481	0/1:4:2,2:2:72:2:72:-5.06878,0,-5.60694	0/1:19:6,13:6:212:13:468:-36.3127,0,-13.7052	0/1:6:5,1:5:180:1:36:-1.74234,0,-14.0696	0/1:608:432,176:432:15436:176:6304:-364.91,0,-1182.43	0/1:104:49,55:49:1749:55:1960:-141.936,0,-124.273	0/1:175:122,52:122:4368:52:1855:-110.938,0,-334.741	0/1:4:3,1:3:108:1:36:-2.38236,0,-8.85684	0/1:124:78,46:78:2791:46:1635:-108.475,0,-206.586	0/1:84:63,19:63:2264:19:679:-35.1813,0,-174.161	0/1:215:104,110:104:3713:110:3944:-285.006,0,-263.666	0/1:195:147,48:147:5245:48:1724:-93.024,0,-398.111	0/1:145:99,46:99:3529:46:1629:-100.901,0,-268.919	0/1:91:50,41:50:1777:41:1457:-99.9029,0,-131.779	0/1:123:68,54:68:2423:54:1936:-135.306,0,-176.832	0/1:196:142,54:142:5037:54:1932:-113.064,0,-387.424	0/1:77:53,24:53:1900:24:860:-53.5703,0,-143.903	0/1:146:105,40:105:3743:40:1405:-79.0912,0,-287.486	0/1:91:25,66:25:900:66:2352:-179.638,0,-51.5745	0/1:7:6,1:6:216:1:36:-1.47584,0,-17.6778	0/1:165:117,48:117:4177:48:1724:-103.679,0,-322.495	0/1:74:37,37:37:1319:37:1320:-94.2921,0,-94.5462	0/1:11:8,2:8:280:2:68:-3.0444,0,-22.166	0/1:198:99,99:99:3537:99:3533:-254.721,0,-256.209	0/1:54:36,18:36:1273:18:633:-40.4293,0,-95.8396	0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7225	0/1:8:3,5:3:108:5:180:-14.0024,0,-7.44711	0/1:144:63,81:63:2264:81:2890:-213.081,0,-156.561	0/1:247:208,38:208:7426:38:1360:-46.1486,0,-586.315	0/1:7:3,4:3:104:4:144:-11.0862,0,-7.5558	0/1:79:28,51:28:1000:51:1828:-138.186,0,-64.337	0/1:120:83,37:83:2954:37:1328:-82.5125,0,-226.721	0/1:70:48,22:48:1711:22:784:-48.5307,0,-130.427	0/1:42:22,20:22:788:20:716:-50.9725,0,-57.8076	0/1:221:102,118:102:3655:118:4215:-308.234,0,-257.997	0/1:82:47,34:47:1692:34:1206:-82.8863,0,-127.273	0/1:169:112,57:112:3986:57:2021:-126.497,0,-305.205	0/1:52:22,30:22:792:30:1060:-78.2574,0,-55.3605	0/1:251:210,32:210:7494:32:1152:-27.0772,0,-585.249	0/1:26:16,10:16:576:10:360:-24.5276,0,-44.1558	0/1:117:44,73:44:1564:73:2607:-197.19,0,-104.14	0/1:78:35,43:35:1256:43:1531:-113.143,0,-88.8164	0/1:273:188,85:188:6719:85:3028:-186.377,0,-516.348	0/1:165:47,117:47:1677:117:4150:-320.763,0,-96.7084	0/1:161:99,62:99:3530:62:2228:-149.561,0,-265.645	0/1:104:77,27:77:2755:27:968:-55.2109,0,-216.032	0/1:14:4,10:4:144:10:360:-28.3735,0,-9.0992	0/1:131:65,66:65:2313:66:2357:-169.957,0,-163.197	0/1:157:97,60:97:3444:60:2159:-142.78,0,-258.379	0/1:285:124,161:124:4405:161:5726:-421.908,0,-300.358	0/1:179:151,27:151:5361:27:955:-30.7763,0,-413.242	0/1:220:156,63:156:5540:63:2264:-133.813,0,-422.903	0/1:181:130,50:130:4611:50:1796:-104.305,0,-345.949	0/1:391:264,127:264:9451:127:4515:-282.326,0,-707.372	0/1:104:91,12:91:3251:12:424:-6.10033,0,-255.614	0/1:182:120,62:120:4299:62:2211:-139.554,0,-326.444	0/1:194:131,62:131:4669:62:2190:-134.409,0,-355.536	0/1:90:71,18:71:2519:18:644:-29.9201,0,-195.651	0/1:212:168,44:168:5940:44:1580:-75.3467,0,-465.516	0/1:198:175,23:175:6233:23:824:-13.7983,0,-496.584	0/1:171:97,74:97:3452:74:2626:-181.849,0,-251.806	0/1:309:192,116:192:6886:116:4151:-273.47,0,-510.088
chr03	11258364	.	TCT	TTT,ACC	246747	PASS	AB=0.503644,0.358795;ABP=4.56131,2331.5;AC=78,83;AF=0.414894,0.441489;AN=188;AO=6772,4824;CIGAR=1M1X1M,1X1M1X;DP=13450;DPB=13450.3;DPRA=0,0;EPP=68.5213,4492.23;EPPR=1841.59;GTI=10;LEN=1,3;MEANALT=2.36559,2.36559;MQM=47.0777,45.5985;MQMR=58.8216;NS=94;NUMALT=2;ODDS=2.03089;PAIRED=0,0;PAIREDR=0;PAO=1.5,0;PQA=54,0;PQR=54;PRO=1.5;QA=240621,169489;QR=64324;RO=1816;RPL=6323,3991;RPP=11066.8,4492.23;RPPR=1841.59;RPR=449,833;RUN=1,1;SAF=3163,0;SAP=66.7936,10478.2;SAR=3609,4824;SRF=0;SRP=3946.4;SRR=1816;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:142:0,62,80:0:0:62,80:2201,2766:-398.887,-222.17,-203.506,-177.063,0,-152.981	1/2:145:0,77,68:0:0:77,68:2708,2421:-411.715,-195.533,-172.354,-216.531,0,-196.061	1/2:207:32,94,81:32:1138:94,81:3324,2824:-391.167,-132.802,-197.249,-175.248,0,-243.606	1/2:206:50,96,60:50:1769:96,60:3391,2118:-277.695,-25.4147,-140.589,-123.253,0,-249.266	1/2:142:25,53,64:25:898:53,64:1891,2268:-253.774,-109.351,-165.955,-79.387,0,-132.679	1/2:159:18,61,79:18:635:61,79:2170,2726:-337.265,-167.84,-199.084,-125.243,0,-151.066	1/2:136:0,63,71:0:0:63,71:2259,2491:-378.093,-198.984,-180.02,-179.117,0,-157.744	1/2:278:80,87,110:80:2825:87,110:3120,3857:-306.17,-79.083,-282.905,-21.1585,0,-218.054	1/2:138:15,83,40:15:533:83,40:2958,1404:-300.716,-69.3107,-87.7604,-192.48,0,-223.873	1/2:109:1,43,65:1:36:43,65:1483,2287:-297.454,-181.194,-171.187,-113.604,0,-96.9754	0/1:149:24,105,19:24:847:105,19:3713,676:-289.373,0,-37.359,-243.319,-15.6917,-306.564	1/2:283:1,173,106:1:36:173,106:6155,3737:-788.13,-295.403,-246.262,-490.101,0,-461.129	1/2:209:32,140,36:32:1145:140,36:4986,1277:-396.372,-8.15623,-59.387,-304.47,0,-387.004	1/2:251:39,144,68:39:1383:144,68:5114,2398:-475.101,-79.2498,-147.866,-295.623,0,-387.116	1/2:154:5,124,25:5:172:124,25:4379,894:-403.929,-58.5783,-34.1351,-333.996,0,-339.359	1/2:180:16,113,50:16:566:113,50:4015,1744:-410.694,-94.6482,-105.526,-275.971,0,-305.813	1/2:129:0,99,30:0:0:99,30:3469,1031:-358.18,-82.6613,-52.8593,-275.858,0,-266.827	1/2:136:23,83,30:23:824:83,30:2956,1071:-247.048,-19.581,-61.0224,-167.961,0,-225.358	1/2:87:2,67,18:2:64:67,18:2396,601:-234.324,-42.8824,-27.8631,-186.907,0,-186.639	1/2:95:0,42,52:0:0:42,52:1508,1843:-268.999,-148.017,-135.374,-120.991,0,-105.338	0/2:189:73,50,66:73:2585:50,66:1770,2320:-164.334,-43.8582,-239.379,0,-68.1227,-190.703	1/2:76:0,27,49:0:0:27,49:968,1699:-214.151,-136.019,-127.891,-78.4814,0,-63.7309	1/2:144:2,54,88:2:72:54,88:1916,3105:-396.693,-243.606,-232.826,-148.224,0,-127.209	1/2:146:38,55,53:38:1342:55,53:1929,1856:-182.569,-40.1915,-132.869,-44.5777,0,-137.858	1/2:103:2,65,36:2:70:65,36:2298,1258:-278.471,-96.268,-81.348,-178.209,0,-172.02	0/2:200:85,51,64:85:3031:51,64:1827,2245:-152.341,-31.3465,-263.016,0,-100.441,-227.751	0/2:237:73,67,97:73:2550:67,97:2402,3416:-252.202,-83.5318,-269.053,0,-15.0431,-176.489	1/2:107:4,70,32:4:144:70,32:2510,1119:-275.463,-78.3935,-68.3681,-187.241,0,-188.654	0/2:177:89,17,71:89:3121:17,71:599,2501:-172.19,-151.432,-399.246,0,-205.385,-231.56	0/2:133:45,39,49:45:1583:39,49:1388,1717:-124.394,-27.2475,-143.911,0,-17.7113,-113.652	1/2:190:55,74,60:55:1947:74,60:2627,2097:-199.675,-8.32726,-144.651,-49.2997,0,-189.836	0/2:4:1,0,3:1:36:0,3:0,108:-8.83803,-9.13906,-12.0768,0,-3.29724,-2.39415	1/2:7:0,4,3:0:0:4,3:135,108:-20.0109,-9.13906,-7.93494,-11.2207,0,-10.3176	1/2:5:0,3,2:0:0:3,2:104,69:-13.8092,-5.40952,-4.50643,-8.7271,0,-8.12504	0/2:20:6,1,13:6:214:1,13:36,458:-35.0792,-33.9471,-51.0936,0,-14.5043,-13.5288	0/2:6:3,1,1:3:101:1,1:36,36:-2.00014,-0.0644291,-7.95294,0,-5.35575,-7.89055	1/2:609:101,332,174:101:3588:332,174:11787,6148:-1100.66,-191.043,-382.949,-648.164,0,-887.63	1/2:105:0,49,56:0:0:49,56:1760,1967:-299.037,-157.566,-142.815,-141.822,0,-124.964	1/2:177:2,122,53:2:72:122,53:4329,1862:-489.49,-142.882,-111.327,-342.063,0,-331.279	0/2:4:2,1,1:2:64:1,1:36,36:-2.32492,-0.00343253,-4.83271,0,-2.19402,-4.82951	1/2:125:1,77,47:1:27:77,47:2741,1670:-349.163,-132.487,-111.435,-214.927,0,-202.907	1/2:85:7,58,19:7:252:58,19:2079,664:-198.812,-34.2135,-35.3464,-148.122,0,-160.996	1/2:218:1,106,110:1:36:106,110:3740,3825:-603.232,-304.952,-275.28,-296.367,0,-265.491	1/2:192:6,138,48:6:216:138,48:4896,1708:-504.649,-119.259,-94.2368,-370.683,0,-372.754	1/2:148:4,96,48:4:144:96,48:3415,1685:-395.861,-123.475,-105.913,-262.252,0,-259.14	0/2:89:25,24,40:25:889:24,40:856,1373:-100.525,-39.4263,-104.64,0,-3.81654,-60.3906	1/2:122:0,67,55:0:0:67,55:2390,1904:-343.588,-153.092,-132.923,-190.841,0,-174.284	0/1:197:63,79,54:63:2223:79,54:2795,1886:-202.68,0,-157.238,-70.05,-29.4279,-234.813	1/2:76:0,52,24:0:0:52,24:1864,850:-216.537,-68.6788,-53.0252,-148.208,0,-140.983	0/1:149:48,58,43:48:1711:58,43:2079,1506:-149.683,0,-122.016,-44.4266,-19.7733,-170.954	1/2:91:0,24,67:0:0:24,67:824,2370:-253.493,-188.274,-181.049,-65.5569,0,-45.3879	0/1:8:4,3,1:4:142:3,1:108,36:-7.60371,0,-10.6644,-5.88445,-8.64307,-17.1509	0/1:165:47,70,48:47:1679:70,48:2477,1700:-183.994,0,-115.544,-61.6745,-0.152226,-183.841	1/2:74:12,25,37:12:428:25,37:892,1286:-134.45,-67.3352,-94.7035,-35.8249,0,-59.5798	0/2:11:8,1,2:8:270:1,2:36,70:-3.24291,-2.72073,-24.2934,0,-18.934,-21.2611	0/2:199:53,46,100:53:1906:46,100:1628,3517:-266.312,-152.437,-294.098,0,-25.6861,-125.407	1/2:55:0,37,18:0:0:37,18:1320,636:-156.05,-51.5961,-40.458,-104.803,0,-99.3845	0/1:5:2,3,0:2:72:3,0:108,0:-8.54684,0,-5.33157,-9.14889,-6.23466,-15.0241	1/2:8:0,3,5:0:0:3,5:108,172:-22.7822,-14.1778,-13.2747,-8.95226,0,-7.44711	1/2:144:0,63,81:0:0:63,81:2224,2868:-407.709,-230.155,-211.19,-177.901,0,-153.517	0/1:249:63,148,37:63:2224:148,37:5262,1317:-403.383,0,-135.475,-317.216,-74.8951,-486.103	1/2:7:0,3,4:0:0:3,4:108,144:-20.7372,-11.9893,-11.0862,-9.10501,0,-7.90089	1/2:80:0,27,53:0:0:27,53:964,1882:-227.179,-150.767,-142.639,-76.7597,0,-60.8051	1/2:118:2,79,37:2:72:79,37:2795,1317:-324.262,-100.345,-82.4384,-218.636,0,-213.373	1/2:71:2,46,23:2:72:46,23:1643,818:-190.354,-59.7096,-51.7376,-125.335,0,-124.286	0/2:43:16,7,20:16:572:7,20:252,693:-50.4226,-35.4653,-80.0054,0,-26.8779,-40.6262	1/2:224:28,77,118:28:987:77,118:2727,4172:-464.875,-255.445,-311.853,-138.273,0,-182.338	1/2:82:4,44,34:4:142:44,34:1572,1206:-211.951,-85.5064,-83.5571,-116.358,0,-117.418	1/2:167:18,91,56:18:640:91,56:3252,1982:-362.444,-105.348,-130.112,-210.354,0,-245.652	1/2:52:0,22,30:0:0:22,30:775,1044:-146.751,-84.1593,-77.5366,-62.9389,0,-53.908	0/1:255:77,142,33:77:2713:142,33:5035,1164:-375.852,0,-172.98,-307.876,-124.57,-513.663	0/2:26:12,4,10:12:424:4,10:144,358:-25.212,-17.2621,-50.5875,0,-22.9664,-31.5184	1/2:118:0,44,74:0:0:44,74:1560,2617:-336.539,-211.145,-197.9,-125.744,0,-103.468	1/2:79:0,36,43:0:0:36,43:1296,1540:-228.909,-124.404,-113.567,-104.86,0,-91.9157	1/2:279:74,117,88:74:2622:117,88:4142,3062:-342.733,-32.2334,-210.125,-119.661,0,-306.279	1/2:165:2,46,117:2:72:46,117:1648,4103:-455.501,-325.842,-317.064,-125.224,0,-95.0721	1/2:164:0,99,65:0:0:99,65:3551,2288:-470.256,-184.444,-154.642,-286.162,0,-266.595	0/2:104:58,19,27:58:2036:19,27:675,967:-60.4905,-23.7164,-183.694,0,-111.465,-157.572	0/2:15:4,1,10:4:144:1,10:36,350:-27.1199,-25.3859,-36.8379,0,-8.8127,-8.73941	1/2:133:1,64,68:1:36:64,68:2237,2375:-364.667,-187.84,-171.512,-174.173,0,-156.641	1/2:159:28,69,61:28:975:69,61:2449,2127:-277.199,-90.3399,-148.855,-116.003,0,-176.924	1/2:284:1,118,165:1:36:118,165:4201,5782:-794.508,-460.717,-428.133,-331.142,0,-284.41	1/2:183:12,143,28:12:429:143,28:5103,984:-442.47,-43.9824,-35.2083,-367.823,0,-393.665	1/2:220:25,131,64:25:885:131,64:4677,2258:-473.391,-108.782,-140.737,-300.742,0,-352.865	1/2:182:2,129,50:2:72:129,50:4566,1777:-495.001,-136.682,-102.947,-353.843,0,-343.89	1/2:392:3,260,128:3:108:260,128:9171,4458:-1070.47,-347.74,-278.285,-714.841,0,-685.122	0/1:108:26,66,12:26:926:66,12:2367,430:-180.646,0,-54.9062,-154.839,-41.1406,-225.991	1/2:180:1,118,61:1:36:118,61:4195,2148:-505.828,-169.159,-136.258,-334.372,0,-318.63	1/2:197:25,108,63:25:884:108,63:3873,2192:-404.298,-102.074,-141.554,-237.754,0,-290.777	1/2:89:3,66,18:3:108:66,18:2360,646:-231.337,-42.6625,-31.6088,-180.781,0,-184.175	0/1:215:56,114,44:56:2001:114,44:4059,1529:-310.302,0,-128.467,-205.801,-41.4295,-355.332	0/1:197:45,129,23:45:1616:129,23:4590,807:-356.333,0,-93.0001,-305.159,-67.1162,-430.062	1/2:170:1,95,73:1:36:95,73:3358,2553:-467.841,-202.092,-176.432,-263.124,0,-244.087	1/2:308:2,189,117:2:70:189,117:6745,4114:-855.536,-322.342,-271.142,-528.097,0,-498.572
chr03	11258371	.	C	T	295667	PASS	AB=0.763928;ABP=4303.65;AC=141;AF=0.75;AN=188;AO=11587;CIGAR=1X;DP=13355;DPB=13355;DPRA=0;EPP=5064.62;EPPR=3596.31;GTI=16;LEN=1;MEANALT=1.03191;MQM=46.4926;MQMR=58.5637;NS=94;NUMALT=1;ODDS=0.61231;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=413743;QR=63115;RO=1765;RPL=11554;RPP=24878;RPPR=3596.31;RPR=33;RUN=1;SAF=3162;SAP=5194;SAR=8425;SRF=0;SRP=3835.66;SRR=1765;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:139:0,139:0:0:139:4976:-440.123,-41.8432,0	1/1:144:1,143:1:36:143:5115:-451.077,-40.4456,0	0/1:207:32,175:32:1152:175:6243:-492.361,0,-41.6769	0/1:205:48,157:48:1724:157:5619:-431.692,0,-93.7121	0/1:143:22,121:22:792:121:4313:-338.801,0,-28.5584	0/1:158:15,143:15:540:143:5077:-400.199,0,-1.3738	1/1:135:0,135:0:0:135:4816:-424.367,-40.6391,0	0/1:273:77,195:77:2745:195:6963:-536.026,0,-165.027	0/1:137:14,123:14:504:123:4362:-344.934,0,-4.45698	1/1:105:1,104:1:36:104:3724:-326.873,-29.3293,0	0/1:145:24,121:24:845:121:4330:-338.342,0,-32.7071	1/1:282:2,280:2:72:280:10005:-876.073,-78.0586,0	0/1:209:32,177:32:1144:177:6314:-493.714,0,-40.3542	0/1:250:36,214:36:1281:214:7668:-599.896,0,-40.3225	1/1:152:5,147:5:180:147:5253:-447.162,-31.521,0	1/1:178:14,164:14:500:164:5860:-472.225,-9.73758,0	1/1:129:0,129:0:0:129:4588:-402.584,-38.8329,0	0/1:135:21,114:21:752:114:4092:-319.418,0,-26.5872	1/1:87:2,85:2:72:85:3045:-263.24,-19.3626,0	1/1:93:1,92:1:36:92:3281:-288,-24.6082,0	0/1:186:72,114:72:2565:114:4096:-307.865,0,-175.107	1/1:75:0,75:0:0:75:2675:-237.474,-22.5773,0	1/1:143:1,142:1:36:142:5062:-445.718,-39.5928,0	0/1:148:38,110:38:1364:110:3917:-302.588,0,-78.4527	1/1:102:2,100:2:68:100:3549:-306.845,-24.7327,0	0/1:197:85,112:85:3018:112:3970:-290.617,0,-212.479	0/1:234:71,163:71:2544:163:5848:-446.25,0,-156.872	1/1:107:3,104:3:104:104:3732:-317.852,-23.2362,0	0/1:175:86,88:86:3069:88:3156:-224.816,0,-222.8	0/1:130:43,87:43:1544:87:3086:-234.373,0,-99.9291	0/1:190:54,136:54:1919:136:4849:-367.107,0,-115.79	0/1:4:1,3:1:21:3:104:-8.47225,0,-0.895826	1/1:7:0,7:0:0:7:252:-22.8474,-2.10721,0	1/1:5:0,5:0:0:5:176:-15.5125,-1.50515,0	0/1:20:6,14:6:216:14:504:-39.2504,0,-13.7699	0/1:6:4,2:4:144:2:72:-4.87157,0,-10.9362	0/1:606:100,506:100:3568:506:18134:-1408.16,0,-136.885	1/1:105:1,104:1:36:104:3702:-324.655,-28.0099,0	1/1:175:1,174:1:36:174:6215:-545.889,-49.0871,0	0/1:4:2,2:2:57:2:72:-5.60694,0,-4.20919	1/1:124:1,123:1:36:123:4379:-382.163,-33.732,0	1/1:84:7,77:7:252:77:2764:-223.733,-4.25436,0	1/1:217:0,217:0:0:217:7737:-685.262,-65.3235,0	1/1:195:5,190:5:176:190:6790:-582.746,-45.7325,0	1/1:143:4,139:4:140:139:4958:-426.698,-30.509,0	0/1:91:25,66:25:900:66:2341:-178.329,0,-53.9096	1/1:122:2,120:2:72:120:4287:-373.376,-30.2892,0	0/1:194:56,138:56:2008:138:4937:-377.449,0,-122.594	1/1:77:0,77:0:0:77:2748:-242.482,-23.1793,0	0/1:150:48,102:48:1709:102:3648:-274.209,0,-108.937	1/1:92:0,92:0:0:92:3292:-288.794,-27.6948,0	0/1:8:4,4:4:144:4:144:-10.8857,0,-10.9054	0/1:165:47,118:47:1688:118:4221:-324.472,0,-102.258	0/1:74:13,61:13:464:61:2173:-169.116,0,-19.6301	0/1:10:7,3:7:252:3:104:-6.63167,0,-20.0187	0/1:197:53,144:53:1900:144:5141:-396.192,0,-111.975	1/1:56:0,56:0:0:56:1966:-173.509,-16.8577,0	0/1:5:2,3:2:72:3:108:-8.54684,0,-5.33157	1/1:8:0,8:0:0:8:284:-25.5531,-2.40824,0	1/1:141:0,141:0:0:141:5009:-443.121,-42.4452,0	0/1:249:59,190:59:2115:190:6798:-527.808,0,-114.126	0/1:7:1,6:1:36:6:216:-17.5439,0,-1.44131	1/1:80:0,80:0:0:80:2849:-251.634,-24.0824,0	1/1:117:4,113:4:140:113:4035:-347.134,-23.1556,0	1/1:70:2,68:2:68:68:2419:-207.707,-14.6144,0	0/1:42:16,26:16:576:26:924:-68.939,0,-39.5317	0/1:223:27,196:27:968:196:6956:-548.35,0,-20.3077	1/1:80:3,77:3:108:77:2750:-235.667,-14.012,0	0/1:167:19,148:19:684:148:5273:-417.638,0,-11.3901	1/1:53:0,53:0:0:53:1902:-168.955,-15.9546,0	0/1:254:73,181:73:2620:181:6485:-489.965,0,-153.65	0/1:25:11,14:11:396:14:504:-37.5944,0,-28.457	1/1:115:0,115:0:0:115:4092:-364.523,-34.6185,0	1/1:81:0,81:0:0:81:2889:-257.574,-24.3834,0	0/1:270:73,197:73:2612:197:6985:-538.421,0,-153.56	1/1:160:2,158:2:72:158:5641:-494.656,-42.1781,0	1/1:160:1,159:1:36:159:5677:-501.631,-44.6163,0	0/1:104:57,47:57:2035:47:1676:-118.223,0,-152.114	0/1:15:4,11:4:144:11:373:-29.2409,0,-8.79817	1/1:131:1,130:1:36:130:4648:-405.696,-35.8367,0	0/1:157:28,129:28:996:129:4607:-358.67,0,-42.6923	1/1:286:1,285:1:36:285:10173:-894.565,-82.4963,0	1/1:179:9,170:9:324:170:6077:-504.082,-26.2981,0	0/1:220:24,196:24:864:196:7036:-553.792,0,-11.1165	1/1:182:2,180:2:72:180:6397:-555.354,-50.4576,0	1/1:384:4,380:4:144:380:13606:-1178.7,-102.319,0	0/1:109:22,87:22:788:87:3111:-240.025,0,-37.9657	1/1:181:1,180:1:36:180:6417:-564.291,-51.2403,0	0/1:195:23,172:23:828:172:6180:-486.523,0,-16.1318	1/1:91:4,87:4:144:87:3116:-264.598,-15.5179,0	0/1:216:56,160:56:2016:160:5687:-440.277,0,-115.379	0/1:199:45,154:45:1620:154:5512:-430.352,0,-86.1846	1/1:170:1,169:1:36:169:6044:-528.508,-47.5768,0	1/1:305:1,303:1:32:303:10842:-949.318,-88.6335,0
chr03	11258377	.	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chr03	11309557	.	A	G	15791.5	PASS	AB=0.558449;ABP=52.0019;AC=32;AF=0.170213;AN=188;AO=937;CIGAR=1X;DP=4289;DPB=4289;DPRA=1.51173;EPP=2037.68;EPPR=7279.61;GTI=2;LEN=1;MEANALT=1;MQM=59.9861;MQMR=59.9779;NS=94;NUMALT=1;ODDS=0.350047;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=33472;QR=119688;RO=3351;RPL=0;RPP=2037.68;RPPR=7279.61;RPR=937;RUN=1;SAF=937;SAP=2037.68;SAR=0;SRF=3351;SRP=7279.61;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:10:3,7:3:108:7:252:-20.0187,0,-7.06487	0/1:90:31,59:31:1112:59:2124:-164.336,0,-73.2986	0/1:56:24,32:24:849:32:1140:-86.0515,0,-59.8701	0/0:92:91,0:91:3251:0:0:0,-27.3937,-292.451	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:26:26,0:26:913:0:0:0,-7.82678,-82.484	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/1:63:33,30:33:1184:30:1076:-78.188,0,-87.9034	0/0:55:55,0:55:1968:0:0:0,-16.5566,-177.395	0/0:51:51,0:51:1816:0:0:0,-15.3525,-163.721	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:32:19,13:19:680:13:468:-32.8267,0,-51.8962	0/1:39:21,18:21:748:18:640:-46.1891,0,-55.9051	0/0:44:44,0:44:1571:0:0:0,-13.2453,-141.681	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.274	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:57:55,2:55:1957:2:72:0,-10.322,-169.567	0/0:90:90,0:90:3209:0:0:0,-27.0927,-289.032	0/1:37:10,27:10:360:27:968:-76.2993,0,-21.6062	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/1:184:84,100:84:2997:100:3542:-263.599,0,-214.571	0/0:80:80,0:80:2838:0:0:0,-24.0824,-255.656	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:78:33,45:33:1188:45:1612:-121.89,0,-83.7483	0/0:81:78,3:78:2742:3:108:0,-14.3083,-236.944	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:5:4,1:4:140:1:36:-2.09312,0,-11.4394	0/0:126:125,1:125:4476:1:36:0,-34.3315,-399.411	0/0:94:93,1:93:3276:1:36:0,-24.6985,-291.458	0/1:34:18,16:18:644:16:568:-41.2168,0,-48.0556	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:64:21,43:21:747:43:1535:-119.176,0,-48.2884	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:32:15,17:15:536:17:608:-45.4191,0,-38.9337	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.102	0/0:73:73,0:73:2590:0:0:0,-21.9752,-233.346	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/1:110:46,64:46:1637:64:2291:-173.337,0,-114.503	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.282	0/0:9:9,0:9:316:0:0:0,-2.70927,-28.7789	0/1:55:30,25:30:1076:25:896:-64.4037,0,-80.5962	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:74:31,43:31:1116:43:1532:-115.892,0,-78.4755	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/1:6:2,4:2:72:4:140:-11.1384,0,-5.03054	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2902	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.056	0/1:96:50,46:50:1796:46:1652:-120.07,0,-133.023	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:72:71,1:71:2548:1:36:0,-18.0759,-225.972	0/0:87:87,0:87:3093:0:0:0,-26.1896,-278.597	0/0:56:52,4:52:1864:4:144:0,-3.54406,-154.726	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:40:40,0:40:1424:0:0:0,-12.0412,-128.457	0/1:78:17,61:17:612:61:2178:-172.805,0,-31.9331	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:81:38,43:38:1368:43:1532:-113.79,0,-99.0374	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/0:51:51,0:51:1824:0:0:0,-15.3525,-164.441	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/0:90:90,0:90:3213:0:0:0,-27.0927,-289.387	0/0:91:91,0:91:3222:0:0:0,-27.3937,-289.575	0/1:25:12,13:12:428:13:464:-34.5718,0,-31.3331	0/1:87:33,54:33:1169:54:1940:-148.687,0,-79.3257	0/1:17:10,7:10:356:7:252:-17.9114,0,-27.2637	0/0:51:50,1:50:1777:1:36:0,-11.7543,-156.613	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:66:65,1:65:2321:1:36:0,-16.2697,-205.55	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.818	0/1:21:12,9:12:432:9:324:-23.1833,0,-32.8996	0/1:36:16,20:16:576:20:695:-52.033,0,-41.3379	0/1:69:36,33:36:1284:33:1163:-84.2051,0,-95.0923	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.229	0/1:28:14,14:14:504:14:504:-37.2693,0,-37.2693	0/1:78:42,36:42:1504:36:1292:-93.1034,0,-112.174	0/1:33:9,24:9:324:24:860:-67.7878,0,-19.5719	0/0:62:62,0:62:2220:0:0:0,-18.6639,-200.064	0/0:58:57,1:57:2040:1:36:0,-13.8615,-180.274
chr03	12661213	.	C	G	26802.4	PASS	AB=0.447645;ABP=91.4597;AC=32;AF=0.170213;AN=188;AO=1677;CIGAR=1X;DP=10082;DPB=10082;DPRA=1.2247;EPP=3644.57;EPPR=18254.2;GTI=0;LEN=1;MEANALT=1;MQM=59.4019;MQMR=59.9779;NS=94;NUMALT=1;ODDS=6.32455;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59940;QR=300511;RO=8405;RPL=0;RPP=3644.57;RPPR=18254.2;RPR=1677;RUN=1;SAF=1677;SAP=3644.57;SAR=0;SRF=8405;SRP=18254.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:17,19:17:608:19:680:-50.6744,0,-44.2149	0/1:167:114,53:114:4079:53:1900:-119.622,0,-317.023	0/1:138:73,65:73:2616:65:2305:-166.114,0,-194.059	0/0:233:232,1:232:8288:1:36:0,-66.5417,-742.333	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.055	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.806	0/0:154:154,0:154:5504:0:0:0,-46.3586,-495.442	0/1:185:115,70:115:4116:70:2508:-170.204,0,-314.926	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:106:106,0:106:3789:0:0:0,-31.9092,-341.207	0/0:119:119,0:119:4232:0:0:0,-35.8226,-381.06	0/1:65:32,33:32:1134:33:1188:-87.6264,0,-82.8003	0/1:78:39,39:39:1396:39:1400:-102.763,0,-102.459	0/0:112:112,0:112:4019:0:0:0,-33.7154,-361.897	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/0:64:64,0:64:2300:0:0:0,-19.2659,-207.256	0/0:100:100,0:100:3576:0:0:0,-30.103,-322.047	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/0:63:63,0:63:2252:0:0:0,-18.9649,-202.943	0/0:286:286,0:286:10252:0:0:0,-86.0946,-922.605	0/0:156:156,0:156:5535:0:0:0,-46.9607,-498.278	0/1:105:34,71:34:1220:71:2556:-198.659,0,-78.4987	0/0:32:32,0:32:1132:0:0:0,-9.63296,-102.189	0/0:97:97,0:97:3442:0:0:0,-29.1999,-309.994	0/0:78:78,0:78:2792:0:0:0,-23.4803,-251.52	0/1:296:185,111:185:6620:111:3954:-266.888,0,-506.775	0/0:180:180,0:180:6416:0:0:0,-54.1854,-577.513	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:307:176,131:176:6312:131:4662:-326.605,0,-475.755	0/0:185:181,4:181:6476:4:144:0,-42.3878,-569.623	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/1:9:4,5:4:144:5:180:-13.8319,0,-10.6043	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:13:13,0:13:460:0:0:0,-3.91339,-41.7354	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:21:16,5:16:572:5:165:-8.85197,0,-45.4918	0/0:193:193,0:193:6915:0:0:0,-58.0988,-622.415	0/0:245:245,0:245:8733:0:0:0,-73.7523,-785.961	0/1:140:62,78:62:2215:78:2800:-210.049,0,-157.47	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:160:67,93:67:2389:93:3331:-251.729,0,-167.101	0/1:65:39,26:39:1392:26:936:-64.9712,0,-106.012	0/0:128:128,0:128:4588:0:0:0,-38.5318,-413.084	0/0:67:67,0:67:2396:0:0:0,-20.169,-215.897	0/0:71:71,0:71:2532:0:0:0,-21.3731,-228.132	0/1:90:49,41:49:1740:41:1476:-106.037,0,-129.787	0/0:136:136,0:136:4859:0:0:0,-40.9401,-437.463	0/0:169:169,0:169:6052:0:0:0,-50.8741,-544.783	0/0:87:87,0:87:3124:0:0:0,-26.1896,-281.386	0/1:193:124,69:124:4444:69:2480:-165.164,0,-342.032	0/0:194:194,0:194:6945:0:0:0,-58.3998,-625.113	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:177:113,64:113:4036:64:2277:-151.873,0,-310.14	0/0:51:50,1:50:1796:1:36:0,-11.7543,-158.324	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:158:92,66:92:3259:66:2364:-165.439,0,-245.97	0/1:31:13,18:13:468:18:625:-47.2406,0,-33.1277	0/1:33:19,14:19:672:14:504:-35.7607,0,-50.8728	0/0:38:38,0:38:1356:0:0:0,-11.4391,-122.34	0/0:72:72,0:72:2580:0:0:0,-21.6742,-232.449	0/1:152:78,74:78:2796:74:2644:-192.423,0,-206.123	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:222:222,0:222:7874:0:0:0,-66.8287,-708.691	0/0:202:200,2:200:7152:2:72:0,-53.9778,-636.905	0/0:102:99,3:99:3552:3:108:0,-20.6299,-309.809	0/0:136:136,0:136:4872:0:0:0,-40.9401,-438.633	0/0:116:116,0:116:4148:0:0:0,-34.9195,-373.504	0/1:85:37,48:37:1324:48:1724:-129.856,0,-93.8745	0/0:84:83,1:83:2980:1:36:0,-21.6882,-264.834	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.286	0/1:128:62,66:62:2232:66:2349:-173.128,0,-162.612	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/0:106:106,0:106:3780:0:0:0,-31.9092,-340.394	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/0:86:86,0:86:3072:0:0:0,-25.8886,-276.661	0/0:175:175,0:175:6268:0:0:0,-52.6802,-564.214	0/1:137:77,60:77:2760:60:2143:-151.251,0,-207.4	0/1:109:68,41:68:2428:41:1462:-98.6881,0,-185.964	0/1:21:11,10:11:388:10:360:-26.4049,0,-28.9357	0/0:114:112,2:112:3992:2:68:0,-27.8642,-353.016	0/0:168:168,0:168:5980:0:0:0,-50.573,-538.308	0/0:229:229,0:229:8196:0:0:0,-68.9359,-737.653	0/0:97:97,0:97:3468:0:0:0,-29.1999,-312.304	0/1:89:46,43:46:1656:43:1544:-112.451,0,-122.537	0/1:60:37,23:37:1303:23:828:-56.7757,0,-99.5088	0/1:127:81,46:81:2891:46:1622:-108.022,0,-222.195	0/0:40:40,0:40:1424:0:0:0,-12.0412,-128.457	0/0:72:72,0:72:2568:0:0:0,-21.6742,-231.37	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.827	0/1:113:56,57:56:2004:57:2048:-150.536,0,-146.617	0/1:169:94,75:94:3372:75:2684:-190.875,0,-252.821	0/1:71:22,49:22:783:49:1741:-135.593,0,-49.4198	0/0:129:129,0:129:4624:0:0:0,-38.8329,-416.267	0/0:109:109,0:109:3912:0:0:0,-32.8123,-352.272
chr03	12661233	.	G	T	182065	PASS	AB=0.547124;ABP=74.4355;AC=156;AF=0.829787;AN=188;AO=8280;CIGAR=1X;DP=9981;DPB=9981;DPRA=0;EPP=17551.1;EPPR=3269.88;GTI=0;LEN=1;MEANALT=1.08511;MQM=59.9807;MQMR=59.4855;NS=94;NUMALT=1;ODDS=7.26936;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=295841;QR=60519;RO=1691;RPL=50;RPP=17551.1;RPPR=3269.88;RPR=8230;RUN=1;SAF=8280;SAP=17982.8;SAR=0;SRF=1691;SRP=3674.97;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:35:18,17:18:644:17:600:-43.7931,0,-47.7369	0/1:163:50,112:50:1792:112:4024:-313.26,0,-110.95	0/1:134:65,69:65:2324:69:2460:-181.228,0,-169.022	1/1:226:1,225:1:36:225:8057:-721.548,-64.4345,0	1/1:84:1,83:1:36:83:2949:-262.027,-21.6882,0	1/1:68:0,68:0:0:68:2440:-219.855,-20.47,0	1/1:150:0,150:0:0:150:5384:-484.584,-45.1545,0	0/1:182:68,114:68:2429:114:4059:-310.71,0,-164.006	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	1/1:105:0,105:0:0:105:3776:-340.037,-31.6082,0	1/1:115:0,115:0:0:115:4115:-370.534,-34.6185,0	0/1:64:33,31:33:1175:31:1108:-80.7651,0,-86.7734	0/1:78:41,37:41:1472:37:1323:-95.891,0,-109.24	1/1:110:0,110:0:0:110:3879:-349.304,-33.1133,0	1/1:60:0,60:0:0:60:2141:-192.956,-18.0618,0	1/1:64:0,64:0:0:64:2289:-206.265,-19.2659,0	1/1:98:0,98:0:0:98:3494:-314.669,-29.5009,0	1/1:60:0,60:0:0:60:2137:-192.596,-18.0618,0	1/1:62:1,61:1:36:61:2142:-189.446,-15.0656,0	1/1:284:0,284:0:0:284:10150:-913.432,-85.4925,0	1/1:157:0,156:0:0:156:5585:-502.56,-46.9607,0	0/1:108:75,33:75:2684:33:1176:-73.6365,0,-209.271	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	1/1:95:0,95:0:0:95:3400:-306.215,-28.5979,0	1/1:79:0,79:0:0:79:2840:-255.838,-23.7814,0	0/1:304:114,190:114:4083:190:6788:-519.478,0,-275.929	1/1:177:0,177:0:0:177:6308:-567.808,-53.2823,0	1/1:28:0,28:0:0:28:993:-89.6825,-8.42884,0	0/1:304:128,175:128:4583:175:6270:-472.821,0,-321.049	1/1:179:4,175:4:144:175:6261:-550.28,-40.5817,0	1/1:61:0,61:0:0:61:2196:-197.905,-18.3628,0	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5309	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:22:5,17:5:176:17:612:-48.7908,0,-9.56236	1/1:186:0,186:0:0:186:6659:-599.385,-55.9916,0	1/1:240:0,237:0:0:237:8471:-762.03,-71.3441,0	0/1:140:79,61:79:2832:61:2170:-153.421,0,-212.928	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:159:94,64:94:3368:64:2297:-159.069,0,-255.312	0/1:66:27,39:27:972:39:1391:-105.62,0,-67.9086	1/1:127:0,127:0:0:127:4560:-410.565,-38.2308,0	1/1:67:0,67:0:0:67:2397:-215.985,-20.169,0	1/1:75:0,75:0:0:75:2685:-241.893,-22.5773,0	0/1:88:42,46:42:1508:46:1637:-121.126,0,-109.517	1/1:132:0,132:0:0:132:4695:-422.711,-39.736,0	1/1:166:0,166:0:0:166:5944:-535.065,-49.971,0	1/1:89:0,89:0:0:89:3173:-285.793,-26.7917,0	0/1:194:71,123:71:2544:123:4420:-339.57,0,-170.62	1/1:190:1,189:1:36:189:6770:-605.772,-53.5974,0	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	0/1:181:68,113:68:2436:113:4043:-309.57,0,-164.974	1/1:50:1,49:1:36:49:1743:-153.555,-11.4532,0	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	0/1:155:67,88:67:2404:88:3138:-235.985,0,-169.934	0/1:32:18,13:18:625:13:468:-32.7679,0,-46.8814	0/1:33:14,19:14:496:19:680:-51.5952,0,-35.0369	1/1:37:0,37:0:0:37:1320:-119.102,-11.1381,0	1/1:73:0,73:0:0:73:2612:-235.328,-21.9752,0	0/1:154:76,78:76:2723:78:2784:-204.441,0,-198.923	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:219:0,218:0:0:218:7801:-701.866,-65.6245,0	1/1:202:2,200:2:72:200:7155:-637.177,-53.9778,0	1/1:99:3,96:3:104:96:3444:-300.47,-20.0992,0	1/1:135:0,135:0:0:135:4825:-434.404,-40.6391,0	1/1:110:0,110:0:0:110:3925:-353.442,-33.1133,0	0/1:85:48,37:48:1716:37:1332:-94.5948,0,-129.13	1/1:82:1,81:1:36:81:2899:-257.547,-21.0862,0	1/1:74:0,74:0:0:74:2613:-235.416,-22.2762,0	0/1:126:65,61:65:2324:61:2192:-159.616,0,-171.484	1/1:46:0,46:0:0:46:1648:-148.609,-13.8474,0	1/1:106:1,105:1:36:105:3768:-335.714,-28.3109,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	1/1:86:0,86:0:0:86:3047:-274.41,-25.8886,0	1/1:175:0,175:0:0:175:6260:-563.493,-52.6803,0	0/1:138:62,76:62:2212:76:2715:-203.051,0,-157.785	0/1:105:37,68:37:1332:68:2435:-187.796,0,-88.3312	0/1:22:10,12:10:360:12:431:-32.508,0,-26.1039	1/1:113:2,111:2:72:111:3982:-351.744,-27.1909,0	1/1:166:0,166:0:0:166:5849:-526.528,-49.971,0	1/1:222:0,221:0:0:221:7880:-708.868,-66.5276,0	1/1:93:0,93:0:0:93:3255:-293.16,-27.9958,0	0/1:88:43,45:43:1540:45:1616:-119.239,0,-112.392	0/1:57:22,35:22:776:35:1245:-95.194,0,-53.0006	0/1:125:47,78:47:1679:78:2774:-212.27,0,-113.755	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	1/1:71:0,71:0:0:71:2539:-228.76,-21.3731,0	1/1:81:0,81:0:0:81:2899:-261.145,-24.3834,0	0/1:110:56,54:56:2012:54:1926:-140.503,0,-148.197	0/1:173:79,94:79:2831:94:3363:-250.808,0,-202.893	0/1:68:46,22:46:1643:22:783:-50.3229,0,-127.682	1/1:125:0,125:0:0:125:4467:-402.144,-37.6288,0	1/1:109:0,109:0:0:109:3888:-350.113,-32.8123,0
chr03	12661258	.	G	A	26235	PASS	AB=0.45536;ABP=66.7938;AC=32;AF=0.170213;AN=188;AO=1692;CIGAR=1X;DP=9920;DPB=9920;DPRA=1.23581;EPP=3677.14;EPPR=17865.5;GTI=0;LEN=1;MEANALT=1.02564;MQM=59.5071;MQMR=59.9869;NS=94;NUMALT=1;ODDS=7.46138;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59317;QR=292342;RO=8226;RPL=1692;RPP=3677.14;RPPR=17804.8;RPR=0;RUN=1;SAF=1692;SAP=3677.14;SAR=0;SRF=8219;SRP=17804.8;SRR=7;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:17,19:17:608:19:654:-48.3359,0,-44.2149	0/1:163:117,46:117:4168:46:1615:-95.3554,0,-326.234	0/1:135:71,64:71:2532:64:2251:-162.159,0,-187.407	0/0:228:227,1:227:8060:1:36:0,-65.0366,-721.825	0/0:84:84,0:84:3005:0:0:0,-25.2865,-270.662	0/0:68:68,0:68:2399:0:0:0,-20.47,-216.168	0/0:151:151,0:151:5396:0:0:0,-45.4555,-485.772	0/1:180:113,67:113:4033:67:2350:-157.514,0,-308.964	0/0:44:44,0:44:1563:0:0:0,-13.2453,-140.961	0/0:103:103,0:103:3639:0:0:0,-31.0061,-327.716	0/0:119:119,0:119:4234:0:0:0,-35.8226,-381.241	0/1:67:32,35:32:1135:35:1228:-90.6301,0,-82.2891	0/1:77:36,41:36:1292:41:1441:-106.761,0,-93.4045	0/0:110:110,0:110:3904:0:0:0,-33.1133,-351.554	0/0:60:60,0:60:2148:0:0:0,-18.0618,-193.587	0/0:63:63,0:63:2248:0:0:0,-18.9649,-202.584	0/0:94:94,0:94:3332:0:0:0,-28.2968,-300.098	0/0:59:59,0:59:2072:0:0:0,-17.7608,-186.749	0/0:64:64,0:64:2265:0:0:0,-19.2659,-204.111	0/0:282:282,0:282:10045:0:0:0,-84.8905,-903.986	0/0:153:153,0:153:5433:0:0:0,-46.0576,-489.103	0/1:111:33,78:33:1180:78:2743:-213.679,0,-73.0937	0/0:30:30,0:30:1057:0:0:0,-9.0309,-95.439	0/0:96:96,0:96:3403:0:0:0,-28.8989,-306.484	0/0:80:80,0:80:2845:0:0:0,-24.0824,-256.287	0/1:302:184,118:184:6541:118:4141:-281.781,0,-497.863	0/0:174:174,0:174:6158:0:0:0,-52.3792,-554.321	0/0:26:26,0:26:927:0:0:0,-7.82678,-83.7474	0/1:305:175,130:175:6235:130:4538:-316.768,0,-469.435	0/0:179:175,4:175:6251:4:131:0,-41.7818,-550.583	0/0:62:61,0:61:2172:0:0:0,-18.3628,-195.387	0/1:10:5,5:5:180:5:171:-12.7138,0,-13.5418	0/0:35:35,0:35:1247:0:0:0,-10.536,-112.534	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:22:17,5:17:612:5:167:-8.73575,0,-48.7908	0/0:184:184,0:184:6579:0:0:0,-55.3895,-592.191	0/0:241:241,0:241:8577:0:0:0,-72.5482,-771.93	0/1:142:61,81:61:2171:81:2861:-214.929,0,-152.91	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:160:65,95:65:2322:95:3316:-250.447,0,-161.074	0/1:63:38,25:38:1356:25:888:-61.2612,0,-103.376	0/0:129:129,0:129:4595:0:0:0,-38.8329,-413.714	0/0:66:66,0:66:2325:0:0:0,-19.868,-209.509	0/0:71:71,0:71:2506:0:0:0,-21.3731,-225.791	0/1:87:46,41:46:1626:41:1438:-103.521,0,-120.435	0/0:133:133,0:133:4707:0:0:0,-40.037,-423.792	0/0:169:169,0:169:5964:0:0:0,-50.8741,-536.87	0/0:87:87,0:87:3112:0:0:0,-26.1896,-280.307	0/1:187:122,65:122:4367:65:2274:-148.603,0,-336.911	0/0:181:181,0:181:6430:0:0:0,-54.4864,-578.79	0/0:15:15,0:15:531:0:0:0,-4.51545,-48.1219	0/1:181:112,68:112:3998:68:2406:-162.216,0,-305.464	0/0:49:48,1:48:1694:1:32:0,-11.5512,-149.545	0/0:24:24,0:24:840:0:0:0,-7.22472,-75.9154	0/1:155:87,68:87:3078:68:2371:-166.98,0,-230.588	0/1:29:13,16:13:464:16:551:-41.1846,0,-33.3676	0/1:31:18,13:18:629:13:464:-32.7622,0,-47.6018	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:73:73,0:73:2602:0:0:0,-21.9752,-234.428	0/1:155:77,78:77:2742:78:2753:-201.328,0,-200.362	0/0:12:12,0:12:424:0:0:0,-3.61236,-38.4964	0/0:214:214,0:214:7608:0:0:0,-64.4204,-684.758	0/0:200:198,2:198:7085:2:72:0,-53.3758,-630.878	0/0:100:97,3:97:3484:3:104:0,-20.4002,-304.067	0/0:136:136,0:136:4831:0:0:0,-40.9401,-434.946	0/0:114:114,0:114:4038:0:0:0,-34.3174,-363.611	0/1:85:38,47:38:1353:47:1637:-122.022,0,-96.4808	0/0:80:79,1:79:2831:1:36:0,-20.4841,-251.43	0/0:72:72,0:72:2562:0:0:0,-21.6742,-230.829	0/1:124:59,65:59:2120:65:2287:-168.756,0,-153.741	0/0:44:44,0:44:1548:0:0:0,-13.2453,-139.583	0/0:103:103,0:103:3630:0:0:0,-31.0061,-326.906	0/0:40:40,0:40:1423:0:0:0,-12.0412,-128.367	0/0:83:83,0:83:2938:0:0:0,-24.9855,-264.655	0/0:173:173,0:173:6175:0:0:0,-52.0782,-555.85	0/1:132:74,58:74:2639:58:1999:-140.442,0,-198.021	0/1:102:63,39:63:2235:39:1350:-91.0282,0,-170.709	0/1:21:12,9:12:432:9:312:-22.076,0,-32.8996	0/0:112:110,2:110:3927:2:72:0,-26.8898,-346.797	0/0:167:167,0:167:5862:0:0:0,-50.272,-527.699	0/0:223:223,0:223:7920:0:0:0,-67.1297,-712.828	0/0:95:95,0:95:3326:0:0:0,-28.5978,-299.529	0/1:88:45,43:45:1608:43:1540:-112.392,0,-118.519	0/1:57:34,23:34:1203:23:799:-55.0623,0,-91.4163	0/1:125:77,48:77:2723:48:1669:-112.853,0,-207.683	0/0:38:38,0:38:1334:0:0:0,-11.4391,-120.358	0/0:72:72,0:72:2531:0:0:0,-21.6742,-228.04	0/0:79:79,0:79:2815:0:0:0,-23.7814,-253.587	0/1:111:53,58:53:1850:58:2049:-151.232,0,-133.362	0/1:174:92,82:92:3261:82:2902:-208.981,0,-241.332	0/1:68:20,48:20:708:48:1669:-130.023,0,-43.5756	0/0:129:129,0:129:4575:0:0:0,-38.8329,-411.861	0/0:105:105,0:105:3729:0:0:0,-31.6081,-335.812
chr03	13370685	.	T	C	21664.8	PASS	AB=0.476019;ABP=16.8621;AC=33;AF=0.175532;AN=188;AO=1327;CIGAR=1X;DP=7364;DPB=7364;DPRA=1.14012;EPP=2849.92;EPPR=13006;GTI=1;LEN=1;MEANALT=1.02703;MQM=59.8779;MQMR=59.9833;NS=94;NUMALT=1;ODDS=1.67915;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47053;QR=215771;RO=6036;RPL=4;RPP=2849.92;RPPR=13006;RPR=1323;RUN=1;SAF=1327;SAP=2884.55;SAR=0;SRF=6036;SRP=13110;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:38,43:38:1360:43:1521:-112.798,0,-98.3172	0/1:45:26,19:26:932:19:653:-45.5429,0,-70.6525	0/1:161:107,54:107:3829:54:1916:-124.252,0,-296.339	0/0:224:224,0:224:8020:0:0:0,-67.4307,-721.82	0/0:52:52,0:52:1859:0:0:0,-15.6536,-167.589	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.8	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/1:131:82,48:82:2921:48:1696:-113.431,0,-223.63	0/0:74:74,0:74:2652:0:0:0,-22.2762,-238.926	0/0:30:30,0:30:1068:0:0:0,-9.0309,-96.4321	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/1:90:42,48:42:1503:48:1712:-127.273,0,-108.471	0/1:88:43,45:43:1548:45:1583:-116.266,0,-113.122	0/0:86:86,0:86:3076:0:0:0,-25.8886,-277.069	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/0:56:56,0:56:2003:0:0:0,-16.8577,-180.543	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:98:98,0:98:3528:0:0:0,-29.5009,-317.723	0/0:127:127,0:127:4548:0:0:0,-38.2308,-409.486	0/1:91:32,59:32:1129:59:2096:-161.516,0,-74.5226	0/0:75:75,0:75:2664:0:0:0,-22.5772,-240.007	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/1:126:66,60:66:2360:60:2148:-155.658,0,-174.721	0/0:233:233,0:233:8287:0:0:0,-70.14,-745.841	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/1:205:96,109:96:3452:109:3872:-286.956,0,-249.18	0/0:128:126,2:126:4490:2:72:0,-31.6951,-397.431	0/0:87:87,0:87:3112:0:0:0,-26.1896,-280.307	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/0:22:22,0:22:776:0:0:0,-6.62266,-70.1622	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:22:17,5:17:608:5:169:-8.89951,0,-48.4294	0/0:168:168,0:168:6003:0:0:0,-50.573,-540.376	0/0:120:118,2:118:4212:2:72:0,-29.2869,-372.423	0/1:65:33,32:33:1188:32:1136:-82.9819,0,-87.6616	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:91:60,31:60:2137:31:1100:-71.9166,0,-165.202	0/1:31:15,16:15:532:16:567:-42.0288,0,-38.8812	0/0:193:193,0:193:6911:0:0:0,-58.0988,-622.056	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.37	0/1:72:47,25:47:1692:25:881:-57.9304,0,-130.893	0/0:135:135,0:135:4817:0:0:0,-40.639,-433.495	0/0:145:145,0:145:5167:0:0:0,-43.6493,-465.168	0/0:53:53,0:53:1880:0:0:0,-15.9546,-169.476	0/1:116:61,55:61:2167:55:1952:-141.036,0,-160.377	0/0:92:92,0:92:3276:0:0:0,-27.6948,-295.059	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:87:48,39:48:1724:39:1380:-98.3091,0,-129.256	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.416	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:111:59,52:59:2108:52:1813:-129.962,0,-156.575	0/1:18:4,14:4:144:14:500:-39.9176,0,-7.89508	0/1:24:18,6:18:621:6:216:-12.5658,0,-48.9861	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:90:90,0:90:3217:0:0:0,-27.0927,-289.751	0/1:128:60,68:60:2160:68:2415:-179.058,0,-156.135	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:127:127,0:127:4510:0:0:0,-38.2308,-406.068	0/0:158:158,0:158:5656:0:0:0,-47.5627,-508.967	0/1:60:54,6:54:1936:6:212:-1.363,0,-156.455	0/0:79:79,0:79:2829:0:0:0,-23.7814,-254.847	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:142:56,86:56:1999:86:3056:-232.525,0,-137.437	0/0:47:47,0:47:1661:0:0:0,-14.1484,-149.776	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/1:42:17,25:17:604:25:896:-68.3171,0,-42.0473	0/0:18:18,0:18:639:0:0:0,-5.41854,-57.8382	0/0:119:119,0:119:4215:0:0:0,-35.8226,-379.529	0/0:92:92,0:92:3293:0:0:0,-27.6948,-296.587	0/0:148:148,0:148:5293:0:0:0,-44.5524,-476.504	0/0:129:129,0:129:4627:0:0:0,-38.8329,-416.591	0/1:144:79,65:79:2794:65:2302:-164.092,0,-208.35	0/1:97:55,42:55:1948:42:1483:-104.564,0,-146.396	0/1:16:10,6:10:360:6:212:-14.6083,0,-27.9278	0/0:96:96,0:96:3444:0:0:0,-28.8989,-310.172	0/0:87:87,0:87:3093:0:0:0,-26.1896,-278.597	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.307	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/1:81:40,41:40:1436:41:1455:-106.861,0,-105.154	0/1:35:19,16:19:680:16:563:-40.4608,0,-50.9931	0/1:121:53,68:53:1904:68:2401:-179.693,0,-135.213	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/0:60:58,2:58:2084:2:72:0,-11.2251,-180.993	0/0:51:50,1:50:1796:1:36:0,-11.7543,-158.324	0/1:61:31,30:31:1100:30:1072:-78.4296,0,-80.9475	0/1:142:65,77:65:2319:77:2756:-205.479,0,-166.224	0/1:42:13,29:13:468:29:1031:-80.4594,0,-29.8164	0/0:97:97,0:97:3475:0:0:0,-29.1999,-312.961	0/0:83:83,0:83:2967:0:0:0,-24.9855,-267.263
chr03	13749969	.	A	G	50310.1	PASS	AB=0.490204;ABP=7.00928;AC=32;AF=0.170213;AN=188;AO=2383;CIGAR=1X;DP=13489;DPB=13489;DPRA=1.1985;EPP=5177.63;EPPR=24110.7;GTI=0;LEN=1;MEANALT=1.06;MQM=52.3907;MQMR=59.9307;NS=94;NUMALT=1;ODDS=7.29597;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=84342;QR=391011;RO=11102;RPL=794;RPP=578.933;RPPR=29.4983;RPR=1589;RUN=1;SAF=794;SAP=578.933;SAR=1589;SRF=5367;SRP=29.4983;SRR=5735;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:64:43,21:43:1513:21:752:-48.0973,0,-117.195	0/1:174:94,79:94:3318:79:2818:-201.053,0,-246.388	0/1:208:136,72:136:4743:72:2499:-160.991,0,-364.423	0/0:243:243,0:243:8612:0:0:0,-73.1503,-775.064	0/0:104:104,0:104:3691:0:0:0,-31.3071,-332.392	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.442	0/0:136:136,0:136:4769:0:0:0,-40.9401,-429.352	0/1:196:113,83:113:3966:83:2945:-205.935,0,-297.761	0/0:158:158,0:158:5583:0:0:0,-47.5627,-502.596	0/0:148:148,0:148:5228:0:0:0,-44.5524,-470.664	0/0:141:141,0:141:4945:0:0:0,-42.4452,-445.207	0/1:106:62,44:62:2162:44:1551:-107.071,0,-162.938	0/1:98:59,39:59:2057:39:1375:-94.2601,0,-155.9	0/0:161:161,0:161:5618:0:0:0,-48.4658,-505.724	0/0:102:101,1:101:3578:1:36:0,-27.1068,-318.631	0/0:126:125,1:125:4336:1:36:0,-34.3315,-386.823	0/0:122:122,0:122:4325:0:0:0,-36.7257,-389.428	0/0:53:52,1:52:1791:1:36:0,-12.3563,-157.869	0/0:84:84,0:84:2908:0:0:0,-25.2865,-261.957	0/0:218:218,0:218:7712:0:0:0,-65.6245,-694.121	0/0:200:200,0:200:7049:0:0:0,-60.206,-634.448	0/1:139:45,94:45:1580:94:3337:-247.267,0,-100.645	0/0:78:77,1:77:2748:1:36:0,-19.8821,-243.964	0/0:149:148,1:148:5239:1:36:0,-41.2552,-468.053	0/0:154:154,0:154:5479:0:0:0,-46.3586,-493.209	0/1:403:204,199:204:7203:199:7099:-508.355,0,-526.65	0/0:457:457,0:457:16094:0:0:0,-137.571,-1448.17	0/0:54:54,0:54:1909:0:0:0,-16.2556,-172.086	0/1:474:207,267:207:7329:267:9442:-682.554,0,-516.125	0/0:189:180,9:180:6321:9:324:0,-27.4175,-539.492	0/0:122:121,0:121:4290:0:0:0,-36.4246,-385.921	0/1:27:16,11:16:572:11:392:-27.4697,0,-43.6833	0/0:35:35,0:35:1228:0:0:0,-10.536,-110.819	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:25:25,0:25:868:0:0:0,-7.52575,-78.4357	0/1:27:17,10:17:573:10:360:-24.4025,0,-43.7598	0/0:304:303,1:303:10688:1:36:0,-87.9148,-958.246	0/0:204:203,1:203:7142:1:36:0,-57.8118,-639.2	0/1:81:46,35:46:1623:35:1207:-84.4544,0,-121.975	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:189:96,93:96:3377:93:3310:-240.59,0,-247.252	0/1:66:43,23:43:1512:23:800:-51.9234,0,-116.505	0/0:239:239,0:239:8388:0:0:0,-71.9462,-754.922	0/0:114:114,0:114:4017:0:0:0,-34.3174,-361.715	0/0:102:101,1:101:3574:1:36:0,-27.1068,-318.272	0/1:187:75,111:75:2630:111:3921:-283.574,0,-180.595	0/0:174:174,0:174:6129:0:0:0,-52.3792,-551.719	0/0:192:192,0:192:6746:0:0:0,-57.7978,-607.185	0/0:193:191,2:191:6726:2:68:0,-51.6411,-598.937	0/1:220:120,100:120:4235:100:3524:-243.369,0,-315.07	0/0:281:281,0:281:9897:0:0:0,-84.5894,-890.688	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:155:104,51:104:3613:51:1804:-115.576,0,-278.719	0/0:87:87,0:87:3080:0:0:0,-26.1896,-277.428	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9319	0/1:176:116,60:116:4081:60:2135:-139.02,0,-314.428	0/1:62:35,27:35:1232:27:950:-65.6055,0,-92.5202	0/1:25:12,13:12:424:13:445:-31.725,0,-30.9707	0/0:17:17,0:17:599:0:0:0,-5.11751,-53.3778	0/0:137:137,0:137:4862:0:0:0,-41.2411,-437.57	0/1:235:106,129:106:3647:129:4583:-327.338,0,-257.61	0/0:24:24,0:24:848:0:0:0,-7.22472,-76.6397	0/0:261:260,1:260:9201:1:36:0,-74.9706,-824.445	0/0:221:218,3:218:7764:3:99:0,-57.322,-689.585	0/0:144:143,1:143:5020:1:36:0,-39.75,-448.285	0/0:203:201,1:201:7080:1:36:0,-57.5696,-633.637	0/0:227:227,0:227:8056:0:0:0,-68.3338,-725.064	0/1:224:83,141:83:2860:141:4983:-362.34,0,-190.209	0/0:110:110,0:110:3871:0:0:0,-33.1133,-347.569	0/0:122:122,0:122:4329:0:0:0,-36.7257,-389.788	0/1:150:53,97:53:1880:97:3456:-257.628,0,-124.324	0/0:44:44,0:44:1568:0:0:0,-13.2453,-141.383	0/0:227:227,0:227:7988:0:0:0,-68.3338,-718.528	0/0:120:120,0:120:4212:0:0:0,-36.1236,-379.264	0/0:140:139,1:139:4883:1:36:0,-38.5459,-436.029	0/0:203:203,0:203:7202:0:0:0,-61.1091,-648.237	0/1:127:65,62:65:2265:62:2189:-157.761,0,-165.851	0/1:162:79,83:79:2754:83:2964:-218.005,0,-199.265	0/1:27:17,10:17:612:10:360:-24.5879,0,-47.2856	0/0:181:181,0:181:6404:0:0:0,-54.4864,-576.409	0/0:192:192,0:192:6711:0:0:0,-57.7978,-604.077	0/0:223:220,3:220:7778:3:108:0,-57.0545,-689.927	0/0:112:112,0:112:3919:0:0:0,-33.7154,-352.906	0/1:109:40,69:40:1423:69:2440:-177.922,0,-95.5544	0/1:100:44,56:44:1556:56:1961:-144.18,0,-110.229	0/1:223:112,111:112:3969:111:3963:-283.202,0,-290.271	0/0:51:51,0:51:1789:0:0:0,-15.3525,-161.29	0/0:119:119,0:119:4208:0:0:0,-35.8226,-378.904	0/0:123:122,1:122:4286:1:36:0,-33.4284,-382.322	0/1:73:45,28:45:1565:28:973:-65.7685,0,-119.161	0/1:166:127,39:127:4438:39:1364:-72.7125,0,-349.59	0/1:125:30,95:30:1039:95:3337:-256.454,0,-56.1869	0/0:70:70,0:70:2471:0:0:0,-21.0721,-222.645	0/0:165:164,1:164:5707:1:36:0,-46.0717,-510.162
chr03	13749974	.	GGCA	GGCG,AGCG	395048	PASS	AB=0.532511,0.462716;ABP=49.1812,63.7308;AC=156,32;AF=0.829787,0.170213;AN=188;AO=12068,2348;CIGAR=3M1X,1X2M1X;DP=14490;DPB=14507.8;DPRA=0,1.12453;EPP=26191,5101.63;EPPR=13.8677;GTI=0;LEN=1,4;MEANALT=2.09574,2.70732;MQM=59.938,52.6346;MQMR=60;NS=94;NUMALT=2;ODDS=14.2775;PAIRED=0,0;PAIREDR=0;PAO=10.5,52.5;PQA=83.5,1731.5;PQR=0;PRO=8;QA=427178,81186;QR=168;RO=5;RPL=6181,737;RPP=18.5633,709.456;RPPR=3.44459;RPR=5887,1611;RUN=1,1;SAF=6179,737;SAP=18.143,709.456;SAR=5889,1611;SRF=3;SRP=3.44459;SRR=2;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:64:0,45,19:0:0:45,19:1608,651:-183.974,-52.8567,-39.3104,-131.13,0,-125.41	1/2:179:0,98,80:0:0:98,80:3452,2795:-508.084,-227.058,-197.557,-281.105,0,-257.023	1/2:216:0,156,59:0:0:156,59:5531,2043:-616.533,-165.917,-118.957,-450.646,0,-432.885	1/1:266:0,264,0:0:0:264,0:9337,0:-839.726,-79.4719,0,-839.726,-79.4719,-839.726	1/1:110:0,109,0:0:0:109,0:3873,0:-348.406,-32.8123,0,-348.406,-32.8123,-348.406	1/1:47:0,47,0:0:0:47,0:1684,0:-151.847,-14.1484,0,-151.847,-14.1484,-151.847	1/1:144:0,143,0:0:0:143,0:5042,0:-453.558,-43.0473,0,-453.558,-43.0473,-453.558	1/2:207:0,124,83:0:0:124,83:4392,2902:-593.812,-236.036,-198.708,-357.796,0,-332.81	1/1:172:0,171,0:0:0:171,0:6082,0:-547.123,-51.4761,0,-547.123,-51.4761,-547.123	1/1:166:0,166,0:0:0:166,0:5884,0:-529.359,-49.971,0,-529.359,-49.971,-529.359	1/1:156:0,156,0:0:0:156,0:5525,0:-497.367,-46.9607,0,-497.367,-46.9607,-497.367	1/2:107:0,65,41:0:0:65,41:2312,1382:-300.447,-112.016,-92.4492,-188.461,0,-176.119	1/2:101:0,63,37:0:0:63,37:2238,1262:-284.781,-102.407,-83.4421,-182.416,0,-171.277	1/1:175:0,174,0:0:0:174,0:6152,0:-553.556,-52.3792,0,-553.556,-52.3792,-553.556	1/1:113:0,113,0:0:0:113,0:3995,0:-359.741,-34.0164,0,-359.741,-34.0164,-359.741	1/1:128:0,128,0:0:0:128,0:4535,0:-408.317,-38.5318,0,-408.317,-38.5318,-408.317	1/1:139:1,137,0:1:30:137,0:4874,0:-435.845,-38.8125,0,-436.146,-41.2411,-438.544	1/1:59:0,58,1:0:0:58,1:2048,35:-184.229,-17.4597,0,-181.381,-14.2621,-181.08	1/1:101:0,101,0:0:0:101,0:3596,0:-323.848,-30.404,0,-323.848,-30.404,-323.848	1/1:236:0,236,0:0:0:236,0:8332,0:-749.894,-71.0431,0,-749.894,-71.0431,-749.894	1/1:213:0,213,0:0:0:213,0:7495,0:-674.597,-64.1194,0,-674.597,-64.1194,-674.597	1/2:145:0,47,96:0:0:47,96:1643,3314:-394.607,-260.945,-246.797,-133.769,0,-104.87	1/1:99:0,97,0:0:0:97,0:3425,0:-308.137,-29.1999,0,-308.137,-29.1999,-308.137	1/1:164:0,163,1:0:0:163,1:5759,36:-518.069,-49.0679,0,-515.132,-45.7706,-514.831	1/1:163:0,162,0:0:0:162,0:5749,0:-517.165,-48.7669,0,-517.165,-48.7669,-517.165	1/2:421:0,219,201:0:0:219,201:7765,6965:-1189.91,-557.665,-491.739,-632.172,0,-571.665	1/1:485:0,483,0:0:0:483,0:17163,0:-1544.07,-145.397,0,-1544.07,-145.397,-1544.07	1/1:59:0,59,0:0:0:59,0:2071,0:-186.658,-17.7608,0,-186.658,-17.7608,-186.658	1/2:497:0,228,268:0:0:228,268:8085,9300:-1391.25,-733.767,-665.132,-657.516,0,-576.84	1/1:220:1,209,9:1:30:209,9:7419,312:-664.702,-60.5204,0,-639.673,-37.543,-639.362	1/1:128:0,127,0:0:0:127,0:4515,0:-406.158,-38.2308,0,-406.158,-38.2308,-406.158	1/2:28:0,17,11:0:0:17,11:599,383:-80.249,-31.4917,-26.3742,-49.107,0,-45.7957	1/1:37:0,37,0:0:0:37,0:1296,0:-116.938,-11.1381,0,-116.938,-11.1381,-116.938	1/1:15:0,15,0:0:0:15,0:540,0:-48.9365,-4.51545,0,-48.9365,-4.51545,-48.9365	1/1:28:0,28,0:0:0:28,0:1004,0:-90.6759,-8.42884,0,-90.6759,-8.42884,-90.6759	1/2:25:0,17,8:0:0:17,8:600,286:-72.281,-23.4107,-18.2931,-48.9562,0,-46.548	1/1:328:0,328,0:0:0:328,0:11586,0:-1042.63,-98.7378,0,-1042.63,-98.7378,-1042.63	1/1:214:0,212,1:0:0:212,1:7547,36:-678.962,-63.8184,0,-676.024,-60.806,-675.723	1/2:91:0,56,34:0:0:56,34:1979,1151:-254.532,-93.3485,-76.4908,-161.22,0,-150.985	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/2:198:0,105,92:0:0:105,92:3734,3171:-561.689,-257.385,-225.777,-304.321,0,-276.626	1/2:70:0,47,23:0:0:47,23:1660,784:-198.598,-63.427,-49.2786,-135.514,0,-128.59	1/1:252:0,250,0:0:0:250,0:8852,0:-796.419,-75.2575,0,-796.419,-75.2575,-796.419	1/1:121:0,121,0:0:0:121,0:4285,0:-385.822,-36.4246,0,-385.822,-36.4246,-385.822	1/1:109:0,107,0:0:0:107,0:3747,0:-337.112,-32.2102,0,-337.112,-32.2102,-337.112	1/2:193:0,81,110:0:0:81,110:2868,3820:-532.777,-299.15,-274.766,-233.669,0,-200.555	1/1:190:0,189,0:0:0:189,0:6716,0:-604.16,-56.8947,0,-604.16,-56.8947,-604.16	1/1:217:0,217,0:0:0:217,0:7623,0:-686.08,-65.3235,0,-686.08,-65.3235,-686.08	1/1:203:0,195,2:0:0:195,2:6938,58:-624.194,-58.7009,0,-619.577,-54.0839,-618.975	1/2:238:0,133,103:0:0:133,103:4751,3542:-668.548,-281.191,-241.154,-387.359,0,-356.353	1/1:310:0,309,0:0:0:309,0:10907,0:-981.256,-93.0183,0,-981.256,-93.0183,-981.256	1/1:14:0,14,0:0:0:14,0:491,0:-44.5211,-4.21442,0,-44.5211,-4.21442,-44.5211	1/2:164:0,117,47:0:0:117,47:4159,1649:-473.107,-134.183,-98.9621,-338.951,0,-324.802	1/1:97:0,97,0:0:0:97,0:3462,0:-311.792,-29.1999,0,-311.792,-29.1999,-311.792	1/1:27:0,27,0:0:0:27,0:964,0:-87.0768,-8.12781,0,-87.0768,-8.12781,-87.0768	1/2:187:0,128,59:0:0:128,59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chr03	15548830	.	G	T	93323.3	PASS	AB=0.46855;ABP=19.1273;AC=156;AF=0.829787;AN=188;AO=3933;CIGAR=1X;DP=4941;DPB=4941;DPRA=0;EPP=5429.33;EPPR=2150.67;GTI=2;LEN=1;MEANALT=1.07447;MQM=53.9858;MQMR=59.9401;NS=94;NUMALT=1;ODDS=0.235042;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=136840;QR=35722;RO=1001;RPL=3836;RPP=7721.66;RPPR=2082.16;RPR=97;RUN=1;SAF=302;SAP=6121.69;SAR=3631;SRF=987;SRP=2056.75;SRR=14;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:10:8,2:8:288:2:68:-3.44248,0,-23.2571	0/1:41:18,23:18:644:23:816:-61.3484,0,-45.9484	0/1:69:54,15:54:1940:15:521:-26.4001,0,-154.097	1/1:39:0,39:0:0:39:1342:-120.891,-11.7402,0	1/1:21:0,21:0:0:21:752:-67.8847,-6.32163,0	1/1:16:0,16:0:0:16:560:-50.5998,-4.81648,0	1/1:42:0,42:0:0:42:1450:-130.523,-12.6433,0	0/1:53:35,18:35:1247:18:621:-40.1057,0,-96.5795	1/1:45:0,45:0:0:45:1550:-137.951,-13.5464,0	1/1:19:0,19:0:0:19:660:-59.4434,-5.71957,0	1/1:137:0,137:0:0:137:4789:-429.678,-41.2411,0	0/1:60:28,32:28:1004:32:1143:-84.9825,0,-72.6141	0/1:63:38,25:38:1355:25:865:-59.0212,0,-103.285	1/1:39:0,39:0:0:39:1376:-123.993,-11.7402,0	1/1:26:0,26:0:0:26:928:-83.6924,-7.82678,0	1/1:47:0,47:0:0:47:1674:-150.683,-14.1484,0	1/1:35:0,35:0:0:35:1211:-109.11,-10.5361,0	1/1:36:0,35:0:0:35:1213:-109.014,-10.5361,0	1/1:98:0,97:0:0:97:3351:-300.804,-29.1999,0	1/1:59:0,59:0:0:59:2034:-183.057,-17.7608,0	1/1:65:0,65:0:0:65:2243:-201.541,-19.567,0	0/1:29:21,8:21:752:8:284:-17.1493,0,-59.2764	1/1:19:0,19:0:0:19:668:-59.7287,-5.71957,0	1/1:41:1,39:1:36:39:1380:-120.738,-8.8025,0	1/1:13:0,13:0:0:13:448:-40.6051,-3.91339,0	0/1:106:67,39:67:2397:39:1317:-86.8537,0,-184.076	1/1:42:0,42:0:0:42:1481:-133.327,-12.6433,0	1/1:18:0,18:0:0:18:632:-57.1389,-5.41854,0	0/1:136:81,55:81:2912:55:1960:-135.643,0,-221.374	0/1:21:2,19:2:72:19:660:-53.2046,0,-0.515092	1/1:28:0,28:0:0:28:984:-88.5853,-8.42884,0	1/1:51:0,51:0:0:51:1754:-157.918,-15.3525,0	1/1:105:1,104:1:36:104:3600:-319.924,-28.015,0	1/1:92:0,92:0:0:92:3159:-283.985,-27.6948,0	1/1:119:0,119:0:0:119:4146:-372.213,-35.8226,0	0/1:74:8,66:8:284:66:2267:-181.6,0,-3.62713	1/1:223:0,222:0:0:222:7818:-702.134,-66.8287,0	1/1:14:0,14:0:0:14:484:-43.836,-4.21442,0	0/1:95:19,76:19:684:76:2627:-207.796,0,-33.2925	1/1:67:0,67:0:0:67:2302:-206.13,-20.169,0	0/1:65:50,15:50:1760:15:520:-27.4309,0,-139.114	0/1:34:13,21:13:464:21:737:-56.3289,0,-31.8625	1/1:45:0,45:0:0:45:1556:-139.9,-13.5464,0	1/1:49:0,49:0:0:49:1702:-153.148,-14.7505,0	1/1:29:0,29:0:0:29:1007:-90.4242,-8.72987,0	0/1:39:29,10:29:1032:10:352:-20.2652,0,-81.4533	1/1:28:0,28:0:0:28:946:-85.2713,-8.42884,0	1/1:35:0,35:0:0:35:1190:-107.157,-10.5361,0	1/1:24:0,24:0:0:24:791:-71.3885,-7.22472,0	0/1:68:57,11:57:2036:11:377:-13.5782,0,-163.042	1/1:66:0,66:0:0:66:2316:-208.464,-19.868,0	1/1:78:0,77:0:0:77:2688:-240.325,-23.1793,0	0/1:45:31,14:31:1108:14:488:-30.6651,0,-86.4846	1/1:18:0,17:0:0:17:588:-52.7973,-5.11751,0	1/1:20:1,19:1:21:19:676:-58.9149,-3.92065,0	0/1:86:72,14:72:2588:14:500:-19.3904,0,-207.28	0/1:21:14,7:14:496:7:234:-14.8033,0,-38.6526	0/1:34:4,30:4:144:30:1076:-86.3186,0,-3.0786	1/1:98:0,98:0:0:98:3381:-304.009,-29.5009,0	1/1:24:0,24:0:0:24:856:-77.034,-7.22472,0	0/1:66:38,28:38:1368:28:992:-69.4278,0,-103.553	1/1:50:0,50:0:0:50:1705:-153.449,-15.0515,0	1/1:81:0,81:0:0:81:2900:-261.203,-24.3834,0	1/1:34:0,34:0:0:34:1177:-105.914,-10.235,0	0/1:17:4,13:4:140:13:440:-34.7132,0,-7.82644	1/1:23:0,23:0:0:23:789:-71.21,-6.92369,0	1/1:31:0,31:0:0:31:1068:-96.0793,-9.33193,0	0/1:70:62,8:62:2189:8:284:-4.63344,0,-176.202	1/1:118:0,118:0:0:118:4075:-365.824,-35.5215,0	1/1:24:0,24:0:0:24:852:-76.8968,-7.22472,0	0/1:56:16,40:16:563:40:1410:-110.255,0,-34.1346	1/1:69:0,69:0:0:69:2369:-212.798,-20.7711,0	1/1:14:0,14:0:0:14:482:-43.6576,-4.21442,0	1/1:20:0,20:0:0:20:685:-61.8117,-6.0206,0	1/1:58:0,58:0:0:58:2025:-182.214,-17.4597,0	1/1:24:0,24:0:0:24:856:-76.9252,-7.22472,0	0/1:29:18,11:18:648:11:373:-25.0651,0,-49.7312	0/1:36:28,8:28:1000:8:276:-14.2722,0,-79.4783	1/1:81:1,80:1:36:80:2715:-240.671,-20.7852,0	1/1:24:0,24:0:0:24:826:-74.5482,-7.22472,0	1/1:25:0,25:0:0:25:853:-76.8756,-7.52575,0	1/1:89:0,88:0:0:88:3036:-270.989,-26.4906,0	1/1:36:0,36:0:0:36:1259:-113.418,-10.8371,0	0/1:36:22,14:22:771:14:488:-33.336,0,-58.8732	0/1:58:25,33:25:900:33:1165:-87.2247,0,-63.8613	0/1:94:43,51:43:1520:51:1794:-132.559,0,-108.791	1/1:26:0,26:0:0:26:893:-80.4916,-7.82678,0	1/1:39:0,39:0:0:39:1380:-124.272,-11.7402,0	1/1:40:0,40:0:0:40:1404:-126.434,-12.0412,0	0/1:87:12,75:12:428:75:2609:-207.94,0,-12.6692	0/1:122:32,90:32:1148:90:3130:-244.45,0,-66.9042	0/1:56:48,8:48:1711:8:288:-9.3597,0,-137.417	1/1:19:0,19:0:0:19:672:-60.7197,-5.71957,0	1/1:70:0,70:0:0:70:2451:-220.307,-21.0721,0
chr03	15548857	.	GCA	CCG,CCA	117422	PASS	AB=0.413333,0.586061;ABP=110.657,109.157;AC=161,27;AF=0.856383,0.143617;AN=188;AO=4251,982;CIGAR=1X1M1X,1X2M;DP=5237;DPB=5239.67;DPRA=0,1.13296;EPP=8278.52,2135.4;EPPR=5.18177;GTI=1;LEN=3,1;MEANALT=1.40426,2.02857;MQM=53.609,59.0978;MQMR=60;NS=94;NUMALT=2;ODDS=0.623385;PAIRED=0,0;PAIREDR=0;PAO=4,4;PQA=86,86;PQR=0;PRO=0;QA=149987,34852;QR=36;RO=1;RPL=4138,0;RPP=8278.52,2135.4;RPPR=5.18177;RPR=113,982;RUN=1,1;SAF=0,0;SAP=9233.94,2135.4;SAR=4251,982;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:6:0,2,4:0:0:2,4:66,140:-17.0666,-11.7405,-11.1384,-5.66262,0,-4.4585	1/2:66:0,29,37:0:0:29,37:1034,1328:-192.777,-108.599,-99.8691,-84.5353,0,-73.3972	1/2:58:0,16,42:0:0:16,42:560,1500:-168.118,-122.605,-117.788,-45.8655,0,-33.2222	1/1:49:0,49,0:0:0:49,0:1737,0:-156.345,-14.7505,0,-156.345,-14.7505,-156.345	1/1:29:0,29,0:0:0:29,0:1023,0:-92.2512,-8.72987,0,-92.2512,-8.72987,-92.2512	1/1:16:0,16,0:0:0:16,0:567,0:-51.2983,-4.81648,0,-51.2983,-4.81648,-51.2983	1/1:46:0,46,0:0:0:46,0:1625,0:-146.182,-13.8474,0,-146.182,-13.8474,-146.182	1/2:38:0,21,17:0:0:21,17:754,604:-110.881,-49.5446,-43.223,-61.693,0,-56.5755	1/1:51:0,51,0:0:0:51,0:1806,0:-161.15,-15.3525,0,-161.15,-15.3525,-161.15	1/1:20:0,20,0:0:0:20,0:698,0:-62.8719,-6.0206,0,-62.8719,-6.0206,-62.8719	1/1:145:0,145,0:0:0:145,0:5100,0:-457.182,-43.6494,0,-457.182,-43.6494,-457.182	1/2:67:0,37,30:0:0:37,30:1322,1072:-195.248,-87.6939,-76.5558,-107.911,0,-98.8801	1/2:55:0,30,25:0:0:30,25:1043,888:-156.848,-72.667,-63.6361,-84.531,0,-77.0052	1/1:40:0,40,0:0:0:40,0:1382,0:-124.53,-12.0412,0,-124.53,-12.0412,-124.53	1/1:27:0,27,0:0:0:27,0:966,0:-87.1017,-8.12781,0,-87.1017,-8.12781,-87.1017	1/1:53:0,53,0:0:0:53,0:1874,0:-168.601,-15.9546,0,-168.601,-15.9546,-168.601	1/1:37:0,37,0:0:0:37,0:1318,0:-118.696,-11.1381,0,-118.696,-11.1381,-118.696	1/1:38:0,38,0:0:0:38,0:1358,0:-122.4,-11.4391,0,-122.4,-11.4391,-122.4	1/1:122:0,122,0:0:0:122,0:4327,0:-388.656,-36.7257,0,-388.656,-36.7257,-388.656	1/1:63:0,63,0:0:0:63,0:2233,0:-200.888,-18.9649,0,-200.888,-18.9649,-200.888	1/1:75:0,75,0:0:0:75,0:2668,0:-239.633,-22.5773,0,-239.633,-22.5773,-239.633	1/2:37:0,5,32:0:0:5,32:178,1144:-108.093,-93.6259,-92.1208,-14.8222,0,-5.18921	1/1:27:0,27,0:0:0:27,0:945,0:-84.0303,-8.12781,0,-84.0303,-8.12781,-84.0303	1/1:44:0,44,0:0:0:44,0:1568,0:-141.217,-13.2453,0,-141.217,-13.2453,-141.217	1/1:15:0,15,0:0:0:15,0:536,0:-48.5142,-4.51545,0,-48.5142,-4.51545,-48.5142	1/2:129:0,28,101:0:0:28,101:1004,3553:-370.818,-289.121,-280.693,-82.053,0,-51.649	1/1:51:0,51,0:0:0:51,0:1817,0:-163.425,-15.3525,0,-163.425,-15.3525,-163.425	1/1:21:0,21,0:0:0:21,0:745,0:-67.2854,-6.32163,0,-67.2854,-6.32163,-67.2854	1/2:110:0,35,75:0:0:35,75:1229,2654:-316.289,-216.37,-205.834,-100.271,0,-77.6935	1/1:22:0,22,0:0:0:22,0:772,0:-69.5836,-6.62266,0,-69.5836,-6.62266,-69.5836	1/1:31:0,31,0:0:0:31,0:1109,0:-99.8566,-9.33193,0,-99.8566,-9.33193,-99.8566	1/1:60:0,60,0:0:0:60,0:2113,0:-190.064,-18.0618,0,-190.064,-18.0618,-190.064	1/1:127:0,127,0:0:0:127,0:4422,0:-397.195,-38.2308,0,-397.195,-38.2308,-397.195	1/1:112:0,112,0:0:0:112,0:3918,0:-351.95,-33.7154,0,-351.95,-33.7154,-351.95	1/1:156:0,155,0:0:0:155,0:5439,0:-488.24,-46.6597,0,-488.24,-46.6597,-488.24	1/1:74:0,74,0:0:0:74,0:2623,0:-235.772,-22.2762,0,-235.772,-22.2762,-235.772	1/1:133:0,133,0:0:0:133,0:4653,0:-417.719,-40.037,0,-417.719,-40.037,-417.719	1/1:16:0,15,1:0:0:15,1:537,36:-48.2424,-4.51545,0,-45.3499,-1.26796,-45.0489	1/2:104:0,85,19:0:0:85,19:3012,684:-301.135,-56.1708,-30.5832,-245.323,0,-239.604	1/1:81:0,81,0:0:0:81,0:2859,0:-255.445,-24.3834,0,-255.445,-24.3834,-255.445	1/2:64:0,18,46:0:0:18,46:643,1648:-186.986,-134.716,-129.298,-52.6268,0,-38.7794	1/2:31:0,24,7:0:0:24,7:832,252:-88.4409,-20.9208,-13.6961,-67.8768,0,-65.7696	1/1:48:0,48,0:0:0:48,0:1702,0:-152.881,-14.4494,0,-152.881,-14.4494,-152.881	1/1:51:0,50,0:0:0:50,0:1777,0:-159.55,-15.0515,0,-159.55,-15.0515,-159.55	1/1:32:0,32,0:0:0:32,0:1131,0:-101.548,-9.63296,0,-101.548,-9.63296,-101.548	1/2:23:0,5,17:0:0:5,17:175,608:-63.9343,-49.7105,-48.2054,-14.34,0,-9.22253	1/1:32:0,32,0:0:0:32,0:1145,0:-102.834,-9.63296,0,-102.834,-9.63296,-102.834	1/1:35:0,35,0:0:0:35,0:1252,0:-112.761,-10.5361,0,-112.761,-10.5361,-112.761	1/1:31:0,31,0:0:0:31,0:1088,0:-98.0356,-9.33193,0,-98.0356,-9.33193,-98.0356	1/2:65:0,14,51:0:0:14,51:491,1824:-188.767,-149.038,-144.824,-40.0796,0,-24.7271	1/1:40:0,40,0:0:0:40,0:1404,0:-126.413,-12.0412,0,-126.413,-12.0412,-126.413	1/1:91:0,91,0:0:0:91,0:3225,0:-288.849,-27.3937,0,-288.849,-27.3937,-288.849	1/2:56:0,15,41:0:0:15,41:531,1468:-163.224,-120.017,-115.502,-43.5611,0,-31.2189	1/1:12:0,12,0:0:0:12,0:432,0:-39.1808,-3.61236,0,-39.1808,-3.61236,-39.1808	1/1:21:0,21,0:0:0:21,0:747,0:-67.3335,-6.32163,0,-67.3335,-6.32163,-67.3335	1/2:88:0,17,71:0:0:17,71:603,2483:-251.339,-202.277,-197.16,-49.4151,0,-28.042	1/2:18:0,7,11:0:0:7,11:236,392:-51.3166,-32.3087,-30.2015,-19.3513,0,-16.04	1/1:41:0,38,3:0:0:38,3:1363,108:-121.995,-1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chr03	15897846	.	AGAAC	TGAAT,TGAAC	244739	PASS	AB=0.566765,0.424405;ABP=147.698,188.504;AC=156,32;AF=0.829787,0.170213;AN=188;AO=9806,1602;CIGAR=1X3M1X,1X4M;DP=11494;DPB=11496;DPRA=0,1.02516;EPP=21279.1,3481.71;EPPR=5.18177;GTI=0;LEN=5,1;MEANALT=2.2234,2.95;MQM=59.9119,60;MQMR=60;NS=94;NUMALT=2;ODDS=2.43431;PAIRED=0,0;PAIREDR=0;PAO=5,5;PQA=160.5,160.5;PQR=0;PRO=0;QA=341243,57206;QR=36;RO=1;RPL=9786,1599;RPP=21123.1,3455.7;RPPR=5.18177;RPR=20,3;RUN=1,1;SAF=9788,1599;SAP=21140.4,3455.7;SAR=18,3;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:50:0,34,16:0:0:34,16:1166,572:-141.65,-46.9969,-36.7619,-95.0062,0,-90.1897	1/2:169:0,117,52:0:0:117,52:4027,1863:-479.325,-152.295,-117.075,-327.384,0,-311.73	1/2:245:0,130,114:0:0:130,114:4489,4083:-697.673,-333.077,-293.943,-364.687,0,-330.369	1/1:364:0,361,0:0:0:361,0:12602,0:-1133.55,-108.672,0,-1133.55,-108.672,-1133.55	1/1:64:0,63,0:0:0:63,0:2201,0:-197.986,-18.9649,0,-197.986,-18.9649,-197.986	1/1:53:0,52,1:0:0:52,1:1809,36:-162.727,-15.6536,0,-159.79,-12.3563,-159.489	1/1:57:0,57,0:0:0:57,0:2005,0:-180.723,-17.1587,0,-180.723,-17.1587,-180.723	1/2:166:0,97,68:0:0:97,68:3358,2427:-470.744,-197.856,-168.656,-272.881,0,-252.411	1/1:109:0,108,0:0:0:108,0:3760,0:-338.294,-32.5112,0,-338.294,-32.5112,-338.294	1/1:136:0,136,0:0:0:136,0:4769,0:-429.374,-40.9401,0,-429.374,-40.9401,-429.374	1/1:52:0,51,0:0:0:51,0:1775,0:-159.711,-15.3525,0,-159.711,-15.3525,-159.711	1/2:74:0,41,32:0:0:41,32:1423,1127:-207.455,-91.7824,-79.4402,-115.701,0,-106.068	1/2:60:0,28,32:0:0:28,32:962,1121:-169.676,-91.5632,-83.1343,-78.4599,0,-68.8269	1/1:42:0,42,0:0:0:42,0:1458,0:-131.514,-12.6433,0,-131.514,-12.6433,-131.514	1/1:54:1,50,0:1:36:50,0:1707,0:-150.331,-12.1083,0,-150.632,-15.0515,-153.569	1/1:73:0,73,0:0:0:73,0:2531,0:-228.044,-21.9752,0,-228.044,-21.9752,-228.044	1/1:67:0,66,0:0:0:66,0:2278,0:-204.921,-19.868,0,-204.921,-19.868,-204.921	1/1:57:0,57,0:0:0:57,0:1979,0:-178.383,-17.1587,0,-178.383,-17.1587,-178.383	1/1:44:0,44,0:0:0:44,0:1514,0:-136.55,-13.2453,0,-136.55,-13.2453,-136.55	1/1:365:0,360,0:0:0:360,0:12608,0:-1134.2,-108.371,0,-1134.2,-108.371,-1134.2	1/1:228:0,228,0:0:0:228,0:7936,0:-714.255,-68.6348,0,-714.255,-68.6348,-714.255	1/2:155:0,82,70:0:0:82,70:2808,2484:-430.299,-202.38,-177.696,-227.909,0,-206.836	1/1:117:0,117,0:0:0:117,0:4054,0:-365.049,-35.2205,0,-365.049,-35.2205,-365.049	1/1:169:0,169,0:0:0:169,0:5860,0:-527.526,-50.8741,0,-527.526,-50.8741,-527.526	1/1:139:0,139,0:0:0:139,0:4818,0:-433.787,-41.8432,0,-433.787,-41.8432,-433.787	1/2:346:0,215,123:0:0:215,123:7474,4399:-966.385,-358.734,-294.012,-607.683,0,-570.656	1/1:249:0,247,0:0:0:247,0:8598,0:-773.512,-74.3544,0,-773.512,-74.3544,-773.512	1/1:30:0,30,0:0:0:30,0:1051,0:-94.8995,-9.0309,0,-94.8995,-9.0309,-94.8995	1/2:313:0,171,141:0:0:171,141:5995,5042:-898.956,-411.118,-359.642,-487.832,0,-445.387	1/1:202:0,192,9:0:0:192,9:6667,324:-599.762,-57.7978,0,-573.324,-31.3071,-570.615	1/1:154:0,152,0:0:0:152,0:5261,0:-473.278,-45.7566,0,-473.278,-45.7566,-473.278	1/2:12:0,7,5:0:0:7,5:251,180:-35.5183,-15.0469,-12.9397,-20.8306,0,-19.3255	1/1:25:0,24,0:0:0:24,0:831,0:-74.7946,-7.22472,0,-74.7946,-7.22472,-74.7946	1/1:7:0,7,0:0:0:7,0:247,0:-22.5729,-2.10721,0,-22.5729,-2.10721,-22.5729	1/1:9:0,9,0:0:0:9,0:289,0:-26.3224,-2.70927,0,-26.3224,-2.70927,-26.3224	1/2:22:0,15,7:0:0:15,7:530,252:-64.0808,-20.9217,-16.4063,-43.5168,0,-41.4096	1/1:192:0,192,0:0:0:192,0:6688,0:-602.016,-57.7978,0,-602.016,-57.7978,-602.016	1/1:228:0,225,0:0:0:225,0:7821,0:-703.651,-67.7318,0,-703.651,-67.7318,-703.651	1/2:69:0,37,31:0:0:37,31:1260,1103:-192.216,-90.0044,-78.8663,-102.316,0,-92.9837	1/1:6:0,6,0:0:0:6,0:209,0:-19.1504,-1.80618,0,-19.1504,-1.80618,-19.1504	1/2:202:0,125,76:0:0:125,76:4368,2696:-575.081,-219.763,-182.135,-355.429,0,-332.551	1/2:42:0,23,19:0:0:23,19:808,684:-121.93,-56.1708,-49.2471,-66.1153,0,-60.3958	1/1:204:0,204,0:0:0:204,0:7110,0:-639.975,-61.4101,0,-639.975,-61.4101,-639.975	1/1:74:0,72,1:0:0:72,1:2524,36:-226.983,-21.6742,0,-224.045,-18.7367,-223.744	1/1:56:0,56,0:0:0:56,0:1955,0:-176.224,-16.8577,0,-176.224,-16.8577,-176.224	1/2:137:0,74,60:0:0:74,60:2572,2147:-384.167,-175.078,-152.802,-209.086,0,-191.024	1/1:191:0,191,0:0:0:191,0:6651,0:-598.598,-57.4967,0,-598.598,-57.4967,-598.598	1/1:202:0,200,0:0:0:200,0:6997,0:-629.233,-60.206,0,-629.233,-60.206,-629.233	1/1:185:0,184,0:0:0:184,0:6410,0:-576.73,-55.3895,0,-576.73,-55.3895,-576.73	1/2:162:0,90,69:0:0:90,69:3122,2452:-453.65,-199.882,-172.789,-253.839,0,-233.068	1/1:205:0,204,0:0:0:204,0:7205,0:-648.311,-61.4101,0,-648.311,-61.4101,-648.311	1/1:12:0,12,0:0:0:12,0:409,0:-37.1359,-3.61236,0,-37.1359,-3.61236,-37.1359	1/2:235:0,141,90:0:0:141,90:4932,3218:-663.678,-262.435,-219.99,-401.283,0,-374.19	1/1:90:0,90,0:0:0:90,0:3100,0:-279.219,-27.0927,0,-279.219,-27.0927,-279.219	1/1:27:0,27,0:0:0:27,0:942,0:-85.0932,-8.12781,0,-85.0932,-8.12781,-85.0932	1/2:144:0,91,53:0:0:91,53:3147,1880:-409.235,-153.521,-126.128,-256.065,0,-240.11	1/2:75:0,40,35: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chr03	15897913	.	T	C	28090.2	PASS	AB=0.497739;ABP=3.1576;AC=32;AF=0.170213;AN=188;AO=1669;CIGAR=1X;DP=9249;DPB=9249;DPRA=1.21653;EPP=3575.27;EPPR=15969.2;GTI=0;LEN=1;MEANALT=1.025;MQM=59.9784;MQMR=59.9898;NS=94;NUMALT=1;ODDS=3.21279;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59640;QR=271883;RO=7579;RPL=1663;RPP=3575.27;RPPR=15969.2;RPR=6;RUN=1;SAF=0;SAP=3627.2;SAR=1669;SRF=0;SRP=16460.6;SRR=7579;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:16,15:16:576:15:536:-39.2429,0,-42.8431	0/1:122:80,42:80:2872:42:1500:-98.5689,0,-221.991	0/1:185:78,107:78:2792:107:3810:-287.406,0,-195.83	0/0:198:198,0:198:7085:0:0:0,-59.6039,-637.706	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/0:52:52,0:52:1853:0:0:0,-15.6536,-167.048	0/0:148:148,0:148:5316:0:0:0,-44.5524,-478.572	0/1:117:60,57:60:2156:57:2035:-148.201,0,-159.086	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/0:73:73,0:73:2628:0:0:0,-21.9752,-236.766	0/0:82:82,0:82:2948:0:0:0,-24.6845,-265.553	0/1:88:57,31:57:2052:31:1083:-71.2747,0,-158.461	0/1:78:41,37:41:1476:37:1324:-95.9818,0,-109.656	0/0:92:92,0:92:3292:0:0:0,-27.6948,-296.499	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.286	0/0:66:65,1:65:2340:1:36:0,-16.2697,-207.261	0/0:87:87,0:87:3116:0:0:0,-26.1896,-280.667	0/0:61:61,0:61:2196:0:0:0,-18.3628,-197.905	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/0:205:205,0:205:7342:0:0:0,-61.7111,-660.822	0/0:121:121,0:121:4340:0:0:0,-36.4246,-390.774	0/1:133:40,93:40:1432:93:3331:-259.97,0,-89.1406	0/0:89:89,0:89:3189:0:0:0,-26.7917,-287.231	0/0:80:80,0:80:2880:0:0:0,-24.0824,-259.431	0/0:92:92,0:92:3274:0:0:0,-27.6948,-294.878	0/1:224:108,116:108:3876:116:4172:-308.23,0,-281.603	0/0:226:226,0:226:8117:0:0:0,-68.0328,-730.541	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/1:229:113,116:113:4064:116:4152:-304.927,0,-297.009	0/0:154:147,6:147:5276:6:216:0,-26.4985,-455.204	0/0:130:130,0:130:4668:0:0:0,-39.1339,-420.28	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/0:229:229,0:229:8228:0:0:0,-68.9359,-740.527	0/0:176:173,3:173:6166:3:104:0,-43.2785,-545.335	0/1:88:36,52:36:1292:52:1868:-141.909,0,-90.0931	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:118:67,51:67:2408:51:1819:-128.469,0,-181.455	0/1:61:39,22:39:1404:22:776:-51.7993,0,-108.296	0/0:153:153,0:153:5492:0:0:0,-46.0576,-494.405	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.311	0/0:89:89,0:89:3187:0:0:0,-26.7917,-287.053	0/1:183:125,58:125:4477:58:2084:-132.742,0,-348.009	0/0:115:115,0:115:4136:0:0:0,-34.6184,-372.422	0/0:134:134,0:134:4808:0:0:0,-40.338,-432.874	0/0:85:85,0:85:3060:0:0:0,-25.5875,-275.628	0/1:144:70,74:70:2516:74:2645:-194.946,0,-183.343	0/0:158:158,0:158:5676:0:0:0,-47.5627,-510.957	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:181:87,94:87:3116:94:3359:-248.038,0,-226.18	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:139:70,69:70:2497:69:2447:-178.639,0,-182.511	0/1:74:28,46:28:1004:46:1643:-125.882,0,-68.3996	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/1:153:80,73:80:2876:73:2608:-188.911,0,-213.018	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:156:156,0:156:5592:0:0:0,-46.9607,-503.384	0/0:200:197,3:197:7072:3:104:0,-50.5032,-626.834	0/0:72:70,2:70:2516:2:72:0,-14.8374,-219.855	0/0:90:90,0:90:3236:0:0:0,-27.0927,-291.461	0/0:100:99,1:99:3552:1:21:0,-28.0031,-317.788	0/1:117:39,78:39:1396:78:2764:-213.782,0,-90.7186	0/0:51:51,0:51:1817:0:0:0,-15.3525,-163.809	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/1:90:53,37:53:1900:37:1328:-92.7295,0,-144.185	0/0:13:13,0:13:453:0:0:0,-3.91339,-41.0996	0/0:117:116,1:116:4160:1:36:0,-31.6222,-370.976	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/0:132:132,0:132:4721:0:0:0,-39.736,-425.043	0/0:182:181,1:181:6500:1:36:0,-51.1892,-581.483	0/1:88:47,41:47:1692:41:1457:-104.933,0,-126.076	0/1:65:29,36:29:1040:36:1287:-96.5648,0,-74.3474	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/0:126:126,0:126:4509:0:0:0,-37.9298,-405.972	0/0:117:117,0:117:4204:0:0:0,-35.2205,-378.539	0/0:213:213,0:213:7630:0:0:0,-64.1194,-686.732	0/0:120:120,0:120:4320:0:0:0,-36.1236,-388.974	0/1:60:21,39:21:756:39:1404:-108.597,0,-50.3054	0/1:92:55,37:55:1976:37:1328:-92.1275,0,-150.42	0/1:153:78,75:78:2796:75:2696:-196.826,0,-205.822	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:111:111,0:111:3992:0:0:0,-33.4143,-359.468	0/0:68:68,0:68:2448:0:0:0,-20.47,-220.574	0/1:76:41,35:41:1457:35:1256:-90.467,0,-108.546	0/1:119:58,61:58:2088:61:2183:-160.914,0,-152.367	0/1:72:27,45:27:972:45:1616:-124.056,0,-66.1237	0/0:120:120,0:120:4289:0:0:0,-36.1236,-386.186	0/0:104:104,0:104:3732:0:0:0,-31.3071,-336.08
chr03	18673127	.	ACAGA	TCAGG,GCAGA	186608	PASS	AB=0.47345,0.517643;ABP=20.8827,10.9024;AC=156,32;AF=0.829787,0.170213;AN=188;AO=6798,1520;CIGAR=1X3M1X,1X4M;DP=8391;DPB=8398.2;DPRA=0,1.23232;EPP=13457.4,2981.84;EPPR=5.18177;GTI=0;LEN=5,1;MEANALT=2.10638,2.69231;MQM=59.6633,59.6842;MQMR=60;NS=94;NUMALT=2;ODDS=3.41694;PAIRED=0,0;PAIREDR=0;PAO=0,37;PQA=0,1332;PQR=0;PRO=0;QA=238490,54101;QR=36;RO=1;RPL=6644,1482;RPP=13457.4,2981.84;RPPR=5.18177;RPR=154,38;RUN=1,1;SAF=0,0;SAP=14764.7,3303.65;SAR=6798,1520;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:41:0,14,24:0:0:14,24:483,852:-108.588,-69.3518,-65.1374,-39.2561,0,-32.0314	1/2:88:0,49,39:0:0:49,39:1709,1387:-252.368,-113.385,-98.6342,-139.336,0,-127.596	1/2:77:0,25,52:0:0:25,52:873,1864:-223.384,-152.378,-144.852,-71.3587,0,-55.7051	1/1:265:0,260,1:0:0:260,1:9052,36:-814.154,-78.2678,0,-811.217,-75.3228,-810.916	1/1:83:0,83,0:0:0:83,0:2923,0:-263.294,-24.9855,0,-263.294,-24.9855,-263.294	1/1:39:0,39,0:0:0:39,0:1383,0:-124.757,-11.7402,0,-124.757,-11.7402,-124.757	1/1:137:0,135,1:0:0:135,1:4749,32:-427.217,-40.6391,0,-424.639,-38.0806,-424.338	1/2:81:0,29,51:0:0:29,51:980,1819:-227.682,-148.262,-139.533,-79.42,0,-64.0674	1/1:84:0,84,0:0:0:84,0:2928,0:-262.998,-25.2865,0,-262.998,-25.2865,-262.998	1/1:82:0,82,0:0:0:82,0:2883,0:-259.656,-24.6845,0,-259.656,-24.6845,-259.656	1/1:75:0,75,0:0:0:75,0:2616,0:-235.687,-22.5773,0,-235.687,-22.5773,-235.687	1/2:65:0,38,27:0:0:38,27:1332,968:-187.471,-79.2033,-67.7642,-108.623,0,-100.495	1/2:74:0,43,31:0:0:43,31:1511,1097:-212.6,-89.7052,-76.7609,-123.247,0,-113.915	1/1:84:0,84,0:0:0:84,0:2946,0:-265.344,-25.2865,0,-265.344,-25.2865,-265.344	1/1:57:0,56,0:0:0:56,0:1967,0:-176.939,-16.8577,0,-176.939,-16.8577,-176.939	1/1:52:0,51,0:0:0:51,0:1775,0:-159.67,-15.3525,0,-159.67,-15.3525,-159.67	1/1:73:0,72,0:0:0:72,0:2527,0:-227.308,-21.6742,0,-227.308,-21.6742,-227.308	1/1:66:0,65,0:0:0:65,0:2309,0:-207.713,-19.567,0,-207.713,-19.567,-207.713	1/1:53:0,53,0:0:0:53,0:1869,0:-168.488,-15.9546,0,-168.488,-15.9546,-168.488	1/1:106:0,106,0:0:0:106,0:3721,0:-335.079,-31.9092,0,-335.079,-31.9092,-335.079	1/1:136:0,135,0:0:0:135,0:4717,0:-424.304,-40.6391,0,-424.304,-40.6391,-424.304	1/2:48:0,19,29:0:0:19,29:672,1040:-139.559,-84.8271,-79.1075,-54.7302,0,-46.0003	1/1:105:0,103,1:0:0:103,1:3635,36:-326.99,-31.0061,0,-324.053,-28.0685,-323.752	1/1:38:0,37,0:0:0:37,0:1281,0:-115.216,-11.1381,0,-115.216,-11.1381,-115.216	1/1:37:0,37,0:0:0:37,0:1279,0:-115.408,-11.1381,0,-115.408,-11.1381,-115.408	1/2:288:0,156,130:0:0:156,130:5514,4632:-826.554,-377.511,-330.551,-449.039,0,-409.905	1/1:200:0,200,0:0:0:200,0:6996,0:-629.573,-60.206,0,-629.573,-60.206,-629.573	1/1:28:0,25,0:0:0:25,0:884,0:-79.5295,-7.52575,0,-79.5295,-7.52575,-79.5295	1/2:418:0,199,215:0:0:199,215:7035,7663:-1197.55,-624.601,-564.696,-572.978,0,-508.256	1/1:114:0,112,2:0:0:112,2:3933,72:-353.751,-33.7154,0,-347.881,-27.4855,-347.279	1/1:90:0,89,0:0:0:89,0:3127,0:-281.289,-26.7917,0,-281.289,-26.7917,-281.289	1/2:18:0,13,5:0:0:13,5:461,171:-51.7796,-14.2203,-10.3069,-37.9047,0,-36.3995	1/1:16:0,16,0:0:0:16,0:561,0:-50.8133,-4.81648,0,-50.8133,-4.81648,-50.8133	1/1:5:0,5,0:0:0:5,0:177,0:-16.277,-1.50515,0,-16.277,-1.50515,-16.277	1/1:17:0,17,0:0:0:17,0:601,0:-54.4048,-5.11751,0,-54.4048,-5.11751,-54.4048	1/2:9:0,6,3:0:0:6,3:207,108:-25.9775,-9.17208,-7.3659,-17.1602,0,-16.2572	1/1:227:0,223,0:0:0:223,0:7865,0:-707.528,-67.1297,0,-707.528,-67.1297,-707.528	1/1:148:0,147,1:0:0:147,1:5162,36:-464.341,-44.2514,0,-461.404,-40.9542,-461.103	1/2:77:0,45,31:0:0:45,31:1594,1095:-219.156,-89.3109,-75.7645,-129.992,0,-120.661	1/1:8:0,8,0:0:0:8,0:283,0:-25.8122,-2.40824,0,-25.8122,-2.40824,-25.8122	1/2:245:0,124,116:0:0:124,116:4310,4145:-688.328,-337.979,-300.651,-350.388,0,-315.468	1/2:38:0,14,24:0:0:14,24:492,849:-109.538,-69.4937,-65.2793,-40.3965,0,-33.1718	1/1:82:0,82,0:0:0:82,0:2829,0:-254.844,-24.6845,0,-254.844,-24.6845,-254.844	1/1:83:0,81,0:0:0:81,0:2869,0:-258.194,-24.3834,0,-258.194,-24.3834,-258.194	1/1:99:0,96,0:0:0:96,0:3382,0:-304.233,-28.8989,0,-304.233,-28.8989,-304.233	1/2:74:0,32,41:0:0:32,41:1106,1459:-208.753,-118.891,-109.258,-89.8548,0,-77.5126	1/1:103:0,103,0:0:0:103,0:3611,0:-325.176,-31.0061,0,-325.176,-31.0061,-325.176	1/1:157:0,154,0:0:0:154,0:5358,0:-482.016,-46.3586,0,-482.016,-46.3586,-482.016	1/1:121:0,120,0:0:0:120,0:4226,0:-380.152,-36.1236,0,-380.152,-36.1236,-380.152	1/2:102:0,40,61:0:0:40,61:1374,2175:-288.844,-177.283,-165.242,-111.55,0,-93.1876	1/1:134:0,133,0:0:0:133,0:4685,0:-421.437,-40.037,0,-421.437,-40.037,-421.437	1/1:8:0,8,0:0:0:8,0:288,0:-26.267,-2.40824,0,-26.267,-2.40824,-26.267	1/2:74:0,38,35:0:0:38,35:1343,1247:-210.914,-101.64,-90.2005,-109.271,0,-98.7351	1/1:37:0,37,0:0:0:37,0:1309,0:-118.108,-11.1381,0,-118.108,-11.1381,-118.108	1/1:18:0,18,0:0:0:18,0:635,0:-57.4693,-5.41854,0,-57.4693,-5.41854,-57.4693	1/2:146:0,56,86:0:0:56,86:1951,3046:-406.71,-248.064,-231.206,-158.644,0,-132.756	1/2:30:0,19,11:0:0:19,11:675,392:-86.9879,-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chr03	18673135	.	T	A	26469.8	PASS	AB=0.523497;ABP=16.8885;AC=32;AF=0.170213;AN=188;AO=1526;CIGAR=1X;DP=8283;DPB=8283;DPRA=1.24039;EPP=3213.27;EPPR=14289.3;GTI=0;LEN=1;MEANALT=1.07317;MQM=59.6429;MQMR=59.6249;NS=94;NUMALT=1;ODDS=2.98517;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54559;QR=241667;RO=6750;RPL=1514;RPP=3213.27;RPPR=14289.3;RPR=12;RUN=1;SAF=0;SAP=3316.68;SAR=1526;SRF=0;SRP=14660.4;SRR=6750;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:17,26:17:600:26:924:-70.3329,0,-40.435	0/1:86:47,39:47:1680:39:1385:-99.0549,0,-125.59	0/1:78:25,53:25:885:53:1904:-148.149,0,-56.478	0/0:261:259,1:259:9253:1:36:0,-75.0292,-828.452	0/0:82:82,0:82:2928:0:0:0,-24.6845,-263.741	0/0:38:38,0:38:1345:0:0:0,-11.4391,-121.34	0/0:133:132,1:132:4740:1:36:0,-36.4387,-423.013	0/1:82:30,52:30:1072:52:1860:-142.966,0,-71.9177	0/0:84:84,0:84:3012:0:0:0,-25.2865,-270.681	0/0:80:80,0:80:2857:0:0:0,-24.0824,-257.257	0/0:73:73,0:73:2612:0:0:0,-21.9752,-235.326	0/1:65:38,27:38:1360:27:972:-68.1247,0,-103.011	0/1:74:43,31:43:1532:31:1116:-78.4746,0,-115.806	0/0:82:82,0:82:2936:0:0:0,-24.6845,-264.443	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.348	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.031	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.022	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.491	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.638	0/0:105:105,0:105:3764:0:0:0,-31.6081,-338.936	0/0:134:133,0:133:4753:0:0:0,-40.037,-427.5	0/1:46:18,28:18:644:28:1008:-77.189,0,-44.4432	0/0:104:103,1:103:3681:1:36:0,-27.7088,-327.881	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.562	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.939	0/1:287:156,131:156:5604:131:4658:-332.804,0,-418.021	0/0:191:191,0:191:6841:0:0:0,-57.4967,-615.605	0/0:28:28,0:28:996:0:0:0,-8.42884,-89.8157	0/1:409:201,208:201:7188:208:7453:-547.633,0,-523.248	0/0:110:108,2:108:3872:2:72:0,-26.2814,-341.423	0/0:88:88,0:88:3156:0:0:0,-26.4906,-284.252	0/1:18:13,5:13:468:5:180:-11.1331,0,-37.0318	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.686	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.0356	0/1:9:6,3:6:212:3:108:-7.3659,0,-16.7128	0/0:225:225,0:225:8080:0:0:0,-67.7317,-727.197	0/0:143:142,1:142:5073:1:36:0,-39.449,-453.079	0/1:77:45,32:45:1620:32:1135:-79.2591,0,-122.902	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:244:122,120:122:4349:120:4286:-312.673,0,-318.209	0/1:38:14,24:14:504:24:860:-66.2689,0,-34.2543	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.7	0/0:79:79,0:79:2836:0:0:0,-23.7814,-254.716	0/0:99:99,0:99:3536:0:0:0,-29.802,-318.423	0/1:71:29,42:29:1040:42:1497:-113.628,0,-72.5412	0/0:102:102,0:102:3641:0:0:0,-30.7051,-327.853	0/0:157:157,0:157:5605:0:0:0,-47.2617,-504.547	0/0:118:118,0:118:4236:0:0:0,-35.5215,-381.401	0/1:97:39,58:39:1396:58:2080:-158.254,0,-96.7368	0/0:132:132,0:132:4720:0:0:0,-39.736,-424.845	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.267	0/1:75:39,36:39:1388:36:1292:-94.0061,0,-102.527	0/0:37:37,0:37:1305:0:0:0,-11.1381,-117.747	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6437	0/1:141:56,85:56:2004:85:3039:-231.217,0,-138.172	0/1:32:19,13:19:684:13:468:-32.808,0,-52.2574	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/0:34:34,0:34:1216:0:0:0,-10.235,-108.468	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.842	0/1:128:61,67:61:2184:67:2385:-176.362,0,-158.276	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5035	0/0:207:206,0:206:7381:0:0:0,-62.0122,-663.453	0/0:161:161,0:161:5772:0:0:0,-48.4658,-519.538	0/0:68:66,2:66:2353:2:72:0,-13.6333,-205.177	0/0:87:87,0:87:3128:0:0:0,-26.1896,-281.731	0/0:155:154,1:154:5483:1:36:0,-43.0614,-489.959	0/1:68:14,54:14:500:54:1936:-154.038,0,-24.8579	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4787	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.409	0/1:58:28,30:28:1000:30:1067:-78.8733,0,-72.8547	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8564	0/0:67:67,0:67:2400:0:0:0,-20.169,-216.241	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.438	0/0:120:119,1:119:4260:1:36:0,-32.5304,-379.62	0/0:108:108,0:108:3853:0:0:0,-32.5112,-346.958	0/1:83:31,52:31:1116:52:1860:-142.686,0,-75.5596	0/1:73:43,30:43:1540:30:1057:-73.4552,0,-116.874	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/0:87:87,0:87:3124:0:0:0,-26.1896,-281.353	0/0:84:84,0:84:3016:0:0:0,-25.2865,-271.616	0/0:275:275,0:275:9860:0:0:0,-82.7832,-887.226	0/0:127:127,0:127:4568:0:0:0,-38.2308,-411.17	0/1:60:27,33:27:968:33:1180:-88.4401,0,-69.3732	0/1:76:42,34:42:1493:34:1212:-86.5019,0,-111.771	0/1:154:91,62:91:3264:62:2232:-154.708,0,-247.555	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.589	0/0:73:73,0:73:2620:0:0:0,-21.9752,-235.615	0/0:78:77,0:77:2760:0:0:0,-23.1793,-248.203	0/1:33:14,19:14:504:19:669:-50.5953,0,-35.629	0/1:104:42,62:42:1504:62:2216:-168.391,0,-104.344	0/1:67:20,47:20:712:47:1692:-132.392,0,-44.2329	0/0:68:67,1:67:2404:1:36:0,-16.8744,-212.994	0/0:119:119,0:119:4268:0:0:0,-35.8226,-384.278
chr03	19418855	.	GAACA	ATACA,ATACG	234726	PASS	AB=0.492034,0.505045;ABP=5.08606,3.84291;AC=155,33;AF=0.824468,0.175532;AN=188;AO=8267,1919;CIGAR=2X3M,2X2M1X;DP=10209;DPB=10209.2;DPRA=0,1.13065;EPP=10731.6,4170.07;EPPR=0;GTI=0;LEN=2,5;MEANALT=1.60638,2.27778;MQM=56.4436,37.9224;MQMR=0;NS=94;NUMALT=2;ODDS=2.76453;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=287023,67870;QR=0;RO=0;RPL=7329,1919;RPP=10731.6,4170.07;RPPR=0;RPR=938,0;RUN=1,1;SAF=8267,1919;SAP=17954.6,4170.07;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=mnp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:37:0,26,11:0:0:26,11:921,376:-104.231,-29.1848,-21.358,-75.3795,0,-72.0682	1/2:265:0,134,129:0:0:134,129:4762,4549:-735.187,-347.132,-306.794,-388.123,0,-349.29	1/2:188:0,81,107:0:0:81,107:2884,3788:-525.026,-289.968,-265.584,-235.405,0,-203.194	1/1:256:0,256,0:0:0:256,0:9031,0:-812.505,-77.0637,0,-812.505,-77.0637,-812.505	1/1:83:0,81,0:0:0:81,0:2904,0:-261.235,-24.3834,0,-261.235,-24.3834,-261.235	1/1:19:0,19,0:0:0:19,0:673,0:-60.896,-5.71957,0,-60.896,-5.71957,-60.896	1/1:104:0,103,0:0:0:103,0:3651,0:-328.434,-31.0061,0,-328.434,-31.0061,-328.434	1/2:252:0,128,124:0:0:128,124:4558,4404:-708.62,-337.112,-298.58,-371.854,0,-334.526	1/1:107:0,107,0:0:0:107,0:3794,0:-341.657,-32.2102,0,-341.657,-32.2102,-341.657	1/1:153:0,153,0:0:0:153,0:5413,0:-487.171,-46.0576,0,-487.171,-46.0576,-487.171	1/1:78:0,77,0:0:0:77,0:2729,0:-245.491,-23.1793,0,-245.491,-23.1793,-245.491	1/2:61:0,31,30:0:0:31,30:1103,1066:-171.798,-81.8956,-72.5637,-90.2476,0,-81.2167	1/2:54:0,30,24:0:0:30,24:1065,850:-152.202,-65.416,-56.3851,-87.1299,0,-79.9052	1/1:93:0,93,0:0:0:93,0:3241,0:-291.91,-27.9958,0,-291.91,-27.9958,-291.91	1/1:50:0,50,0:0:0:50,0:1785,0:-160.932,-15.0515,0,-160.932,-15.0515,-160.932	1/1:53:0,53,0:0:0:53,0:1887,0:-170.108,-15.9546,0,-170.108,-15.9546,-170.108	1/1:94:0,94,0:0:0:94,0:3352,0:-301.892,-28.2968,0,-301.892,-28.2968,-301.892	1/1:54:0,54,0:0:0:54,0:1934,0:-174.337,-16.2556,0,-174.337,-16.2556,-174.337	1/1:29:0,29,0:0:0:29,0:1027,0:-92.7421,-8.72987,0,-92.7421,-8.72987,-92.7421	1/1:246:0,246,0:0:0:246,0:8762,0:-788.561,-74.0534,0,-788.561,-74.0534,-788.561	1/1:178:0,178,0:0:0:178,0:6334,0:-570.151,-53.5833,0,-570.151,-53.5833,-570.151	1/2:88:0,35,52:0:0:35,52:1023,1838:-213.5,-140.788,-130.252,-72.7429,0,-57.0893	1/1:86:0,86,0:0:0:86,0:3044,0:-274.188,-25.8886,0,-274.188,-25.8886,-274.188	1/1:139:0,139,0:0:0:139,0:4922,0:-443.132,-41.8432,0,-443.132,-41.8432,-443.132	1/1:97:0,97,0:0:0:97,0:3447,0:-310.445,-29.1999,0,-310.445,-29.1999,-310.445	1/2:384:0,175,207:0:0:175,207:5097,7305:-919.735,-556.869,-504.189,-362.822,0,-300.509	1/1:250:0,250,0:0:0:250,0:8822,0:-793.973,-75.2575,0,-793.973,-75.2575,-793.973	1/1:39:0,39,0:0:0:39,0:1402,0:-126.479,-11.7402,0,-126.479,-11.7402,-126.479	1/2:282:0,142,139:0:0:142,139:4135,4901:-667.467,-374.778,-332.032,-292.649,0,-250.806	1/1:153:0,140,12:0:0:140,12:4942,419:-444.597,-42.1442,0,-412.508,-10.0811,-408.896	1/1:131:0,131,0:0:0:131,0:4578,0:-412.188,-39.4349,0,-412.188,-39.4349,-412.188	1/2:18:0,13,5:0:0:13,5:466,179:-52.041,-14.0189,-10.1055,-38.3653,0,-36.8601	1/1:24:0,24,0:0:0:24,0:851,0:-76.9092,-7.22472,0,-76.9092,-7.22472,-76.9092	1/1:8:0,8,0:0:0:8,0:286,0:-26.0855,-2.40824,0,-26.0855,-2.40824,-26.0855	1/1:15:0,15,0:0:0:15,0:529,0:-47.9406,-4.51545,0,-47.9406,-4.51545,-47.9406	1/2:9:0,7,2:0:0:7,2:252,66:-26.0014,-5.40552,-3.29831,-20.9217,0,-20.3197	1/1:156:0,156,0:0:0:156,0:4565,0:-372.454,-46.9607,0,-372.454,-46.9607,-372.454	1/1:181:0,181,0:0:0:181,0:6462,0:-581.663,-54.4864,0,-581.663,-54.4864,-581.663	1/2:34:0,21,13:0:0:21,13:752,456:-96.6027,-35.2597,-28.9381,-61.6848,0,-57.7714	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/2:178:0,87,91:0:0:87,91:3108,3235:-500.486,-247.075,-220.885,-253.757,0,-226.364	1/2:33:0,18,15:0:0:18,15:648,533:-93.9254,-41.0384,-35.6198,-53.2333,0,-48.7179	1/1:181:0,181,0:0:0:181,0:6415,0:-577.439,-54.4864,0,-577.439,-54.4864,-577.439	1/1:74:0,73,0:0:0:73,0:2599,0:-233.902,-21.9752,0,-233.902,-21.9752,-233.902	1/1:53:0,53,0:0:0:53,0:1884,0:-169.836,-15.9546,0,-169.836,-15.9546,-169.836	1/2:53:0,22,31:0:0:22,31:642,1087:-128.941,-83.4545,-76.8318,-45.7778,0,-36.4459	1/1:160:0,160,0:0:0:160,0:5633,0:-507.091,-48.1648,0,-507.091,-48.1648,-507.091	1/1:185:0,185,0:0:0:185,0:6573,0:-591.652,-55.6906,0,-591.652,-55.6906,-591.652	1/1:132:0,131,0:0:0:131,0:4641,0:-417.494,-39.4349,0,-417.494,-39.4349,-417.494	1/2:222:0,104,118:0:0:104,118:3730,4176:-623.42,-319.173,-287.866,-304.594,0,-269.072	1/1:124:0,123,0:0:0:123,0:3556,0:-287.619,-37.0267,0,-287.619,-37.0267,-287.619	1/1:13:0,12,1:0:0:12,1:404,36:-36.3439,-3.61236,0,-33.5959,-0.52579,-33.2949	1/2:180:0,98,80:0:0:98,80:3486,2829:-500.355,-216.249,-186.748,-284.09,0,-260.008	1/1:24:0,24,0:0:0:24,0:681,0:-55.5122,-7.22472,0,-55.5122,-7.22472,-55.5122	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:166:0,71,93:0:0:71,93:2500,3287:-454.569,-251.305,-229.932,-203.292,0,-175.296	1/2:38:0,6,32:0:0:6,32:214,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chr03	19443678	.	A	T	15256.6	PASS	AB=0.506254;ABP=4.09672;AC=33;AF=0.175532;AN=188;AO=1630;CIGAR=1X;DP=8335;DPB=8335;DPRA=1.41127;EPP=3542.51;EPPR=14430.6;GTI=0;LEN=1;MEANALT=1.02564;MQM=28.4098;MQMR=40.1413;NS=94;NUMALT=1;ODDS=3.21202;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57744;QR=239075;RO=6704;RPL=1630;RPP=3542.51;RPPR=14430.6;RPR=0;RUN=1;SAF=1630;SAP=3542.51;SAR=0;SRF=6704;SRP=14560.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:35,28:35:1247:28:995:-44.9361,0,-86.9426	0/1:63:23,40:23:828:40:1405:-71.819,0,-50.7476	0/1:176:90,86:90:3212:86:3036:-143.211,0,-213.098	0/0:135:135,0:135:4830:0:0:0,-40.639,-422.445	0/0:22:22,0:22:788:0:0:0,-6.62266,-68.6813	0/0:18:18,0:18:648:0:0:0,-5.41854,-55.1377	0/0:62:62,0:62:2216:0:0:0,-18.6639,-193.421	0/1:125:61,64:61:2168:64:2263:-108.921,0,-147.193	0/0:59:59,0:59:2096:0:0:0,-17.7608,-177.813	0/0:71:71,0:71:2509:0:0:0,-21.3731,-218.116	0/0:92:92,0:92:3300:0:0:0,-27.6948,-288.624	0/1:79:37,42:37:1298:42:1479:-72.4501,0,-85.62	0/1:68:31,37:31:1086:37:1292:-62.9083,0,-72.4542	0/0:92:92,0:92:3225:0:0:0,-27.6948,-277.482	0/0:53:53,0:53:1873:0:0:0,-15.9546,-162.029	0/0:67:67,0:67:2380:0:0:0,-20.169,-203.101	0/0:44:44,0:44:1568:0:0:0,-13.2453,-134.029	0/0:31:31,0:31:1078:0:0:0,-9.33193,-91.6323	0/0:63:63,0:63:2212:0:0:0,-18.9649,-186.044	0/0:181:181,0:181:6488:0:0:0,-54.4864,-566.018	0/0:108:108,0:108:3855:0:0:0,-32.5112,-329.11	0/1:67:21,46:21:756:46:1645:-105.166,0,-45.0297	0/0:56:55,1:55:1972:1:36:0,-13.9549,-168.232	0/0:65:65,0:65:2315:0:0:0,-19.5669,-197.71	0/0:71:71,0:71:2548:0:0:0,-21.3731,-217.63	0/1:186:100,86:100:3563:86:3053:-174.817,0,-256.473	0/0:245:244,1:244:8679:1:36:0,-71.0161,-741.103	0/0:23:23,0:23:824:0:0:0,-6.92369,-71.4257	0/1:276:123,152:123:4412:152:5400:-324.721,0,-304.622	0/0:152:149,3:149:5318:3:99:0,-38.6169,-449.285	0/0:73:73,0:73:2603:0:0:0,-21.9752,-227.723	0/1:7:6,1:6:216:1:36:-0.628992,0,-16.8312	0/0:45:45,0:45:1604:0:0:0,-13.5463,-137.934	0/0:29:29,0:29:1040:0:0:0,-8.72987,-88.0786	0/0:35:35,0:35:1239:0:0:0,-10.536,-104.753	0/1:47:20,27:20:711:27:956:-47.6977,0,-45.7647	0/0:149:149,0:149:5310:0:0:0,-44.8535,-466.472	0/0:122:122,0:122:4376:0:0:0,-36.7257,-376.915	0/1:64:35,29:35:1243:29:1019:-47.5403,0,-84.5831	0/0:9:9,0:9:324:0:0:0,-2.70927,-28.2659	0/1:152:80,72:80:2849:72:2571:-131.089,0,-198.357	0/1:25:14,11:14:496:11:392:-19.7621,0,-35.1284	0/0:263:263,0:263:9388:0:0:0,-79.1709,-801.994	0/0:43:43,0:43:1518:0:0:0,-12.9443,-131.628	0/0:43:43,0:43:1535:0:0:0,-12.9443,-133.91	0/1:87:42,45:42:1496:45:1590:-94.2613,0,-105.504	0/0:141:141,0:141:5022:0:0:0,-42.4452,-422.357	0/0:128:128,0:128:4580:0:0:0,-38.5318,-399.355	0/0:80:80,0:80:2864:0:0:0,-24.0824,-250.074	0/1:139:66,73:66:2356:73:2584:-144.423,0,-162.212	0/0:78:78,0:78:2779:0:0:0,-23.4803,-241.486	0/0:14:14,0:14:500:0:0:0,-4.21442,-43.0837	0/1:162:94,68:94:3355:68:2395:-106.985,0,-235.265	0/0:74:74,0:74:2639:0:0:0,-22.2762,-232.222	0/0:16:16,0:16:576:0:0:0,-4.81648,-48.6418	0/1:148:69,79:69:2472:79:2803:-147.259,0,-165.587	0/1:11:5,6:5:180:6:216:-12.6539,0,-12.8011	0/1:21:12,9:12:432:9:313:-17.657,0,-32.203	0/0:15:15,0:15:536:0:0:0,-4.51545,-46.9952	0/0:81:81,0:81:2895:0:0:0,-24.3834,-247.219	0/1:130:66,64:66:2352:64:2269:-125.901,0,-164.976	0/0:20:20,0:20:716:0:0:0,-6.0206,-61.9778	0/0:134:134,0:134:4820:0:0:0,-40.338,-420.557	0/0:261:257,4:257:9178:4:144:0,-67.8286,-785.788	0/1:92:43,49:43:1540:49:1756:-91.6061,0,-102.144	0/0:63:63,0:63:2264:0:0:0,-18.9649,-197.866	0/0:117:116,1:116:4114:1:36:0,-32.3177,-354.858	0/1:178:66,112:66:2352:112:3942:-234.833,0,-150.918	0/0:70:70,0:70:2486:0:0:0,-21.0721,-213.937	0/0:56:56,0:56:1983:0:0:0,-16.8577,-167.417	0/1:45:23,22:23:811:22:788:-46.0813,0,-57.7412	0/0:40:40,0:40:1436:0:0:0,-12.0412,-125.552	0/0:140:139,1:139:4946:1:36:0,-39.5855,-409.832	0/0:85:85,0:85:3023:0:0:0,-25.5875,-255.414	0/0:82:82,0:82:2881:0:0:0,-24.6845,-246.665	0/0:197:197,0:197:7059:0:0:0,-59.3029,-614.679	0/1:109:69,40:69:2476:40:1419:-58.8213,0,-175.175	0/1:130:76,54:76:2727:54:1918:-84.2954,0,-191.435	0/1:34:18,16:18:636:16:572:-26.8156,0,-44.232	0/0:113:113,0:113:4022:0:0:0,-34.0164,-347.282	0/0:111:111,0:111:3968:0:0:0,-33.4143,-330.322	0/0:138:138,0:138:4940:0:0:0,-41.5421,-428.387	0/0:42:42,0:42:1500:0:0:0,-12.6433,-130.597	0/1:72:37,35:37:1324:35:1230:-67.8159,0,-94.0227	0/1:32:14,18:14:500:18:627:-36.3061,0,-33.9408	0/1:93:50,43:50:1788:43:1527:-83.2303,0,-126.785	0/0:20:20,0:20:716:0:0:0,-6.0206,-60.8974	0/0:57:57,0:57:2006:0:0:0,-17.1587,-169.132	0/0:77:77,0:77:2736:0:0:0,-23.1793,-228.43	0/1:99:46,53:46:1625:53:1888:-100.856,0,-110.367	0/1:178:93,85:93:3335:85:3030:-154.143,0,-232.14	0/1:40:13,27:13:468:27:948:-57.3175,0,-29.1751	0/0:95:95,0:95:3408:0:0:0,-28.5978,-295.512	0/0:71:71,0:71:2513:0:0:0,-21.3731,-217.114
chr03	19767693	.	AAGG	CAGA,CAGG	559967	PASS	AB=0.496492,0.498291;ABP=3.60444,3.15131;AC=163,25;AF=0.867021,0.132979;AN=188;AO=17588,2837;CIGAR=1X2M1X,1X3M;DP=20517;DPB=20518.5;DPRA=0,1.34501;EPP=38168.8,6163.48;EPPR=11.6962;GTI=0;LEN=4,1;MEANALT=2.42553,2.94643;MQM=59.9078,59.9771;MQMR=60;NS=94;NUMALT=2;ODDS=3.87812;PAIRED=0,0;PAIREDR=0;PAO=3.5,2.5;PQA=118.5,82.5;PQR=0;PRO=0;QA=611909,100259;QR=128;RO=4;RPL=9205,1426;RPP=86.4325,3.18252;RPPR=5.18177;RPR=8383,1411;RUN=1,1;SAF=9208,1426;SAP=87.6548,3.18252;SAR=8380,1411;SRF=1;SRP=5.18177;SRR=3;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:54:1,23,30:1:28:23,30:789,1047:-146.764,-83.0093,-78.3021,-61.9029,0,-55.0881	1/2:328:0,183,144:0:0:183,144:6305,5086:-926.281,-414.18,-359.092,-512.09,0,-468.742	1/2:344:1,195,148:1:29:195,148:6752,5229:-972.006,-423.6,-367.208,-546.458,0,-504.214	1/1:537:0,534,0:0:0:534,0:18596,0:-1672.24,-160.75,0,-1672.24,-160.75,-1672.24	1/1:125:0,125,0:0:0:125,0:4412,0:-396.322,-37.6288,0,-396.322,-37.6288,-396.322	1/1:124:0,124,0:0:0:124,0:4283,0:-385.636,-37.3277,0,-385.636,-37.3277,-385.636	1/1:399:0,397,1:0:0:397,1:13807,32:-1242.1,-119.509,0,-1239.52,-116.951,-1239.22	1/1:421:0,419,0:0:0:419,0:14543,0:-1308.4,-126.132,0,-1308.4,-126.132,-1308.4	1/1:256:0,254,1:0:0:254,1:8861,27:-796.08,-76.4616,0,-793.951,-74.3778,-793.65	1/1:212:0,212,0:0:0:212,0:7364,0:-662.757,-63.8184,0,-662.757,-63.8184,-662.757	1/1:147:0,143,2:0:0:143,2:5011,68:-450.785,-43.0473,0,-445.272,-37.5239,-444.67	1/2:200:0,101,98:0:0:101,98:3509,3404:-562.023,-276.748,-246.344,-285.301,0,-255.8	1/2:187:0,94,93:0:0:94,93:3280,3259:-531.208,-265.535,-237.238,-266.022,0,-238.026	1/1:153:0,152,0:0:0:152,0:5255,0:-472.797,-45.7566,0,-472.797,-45.7566,-472.797	1/1:146:0,145,1:0:0:145,1:5091,36:-457.283,-43.6494,0,-454.345,-40.3521,-454.044	1/1:166:0,165,1:0:0:165,1:5724,36:-514.931,-49.67,0,-511.994,-46.3727,-511.693	1/1:160:0,159,0:0:0:159,0:5556,0:-499.911,-47.8638,0,-499.911,-47.8638,-499.911	1/1:123:0,121,2:0:0:121,2:4264,72:-383.584,-36.4246,0,-377.71,-30.19,-377.107	1/2:125:0,53,72:0:0:53,72:1840,2529:-355.758,-206.185,-190.23,-149.921,0,-128.247	1/1:433:0,430,2:0:0:430,2:14976,68:-1347.01,-129.443,0,-1341.49,-123.927,-1340.89	1/1:367:0,365,0:0:0:365,0:12782,0:-1149.93,-109.876,0,-1149.93,-109.876,-1149.93	1/1:167:0,166,1:0:0:166,1:5738,32:-516.235,-49.971,0,-513.657,-47.0727,-513.356	1/1:176:0,174,0:0:0:174,0:6025,0:-541.994,-52.3792,0,-541.994,-52.3792,-541.994	1/1:236:0,236,0:0:0:236,0:8190,0:-737.137,-71.0431,0,-737.137,-71.0431,-737.137	1/1:188:0,186,2:0:0:186,2:6453,72:-580.483,-55.9916,0,-574.608,-49.7569,-574.006	1/2:651:0,320,329:0:0:320,329:11093,11741:-1858.9,-957.285,-860.955,-901.731,0,-802.692	1/1:494:0,490,3:0:0:490,3:17009,108:-1530.16,-147.505,0,-1521.35,-138.655,-1520.45	1/1:94:0,93,1:0:0:93,1:3230,36:-290.564,-27.9958,0,-287.626,-24.6985,-287.325	1/1:548:0,547,0:0:0:547,0:19095,0:-1717.71,-164.663,0,-1717.71,-164.663,-1717.71	1/1:243:0,234,8:0:0:234,8:8102,284:-728.869,-70.441,0,-705.728,-47.243,-703.32	1/1:289:0,286,1:0:0:286,1:9908,36:-890.971,-86.0946,0,-888.033,-83.1538,-887.732	1/2:12:0,5,7:0:0:5,7:168,244:-33.7955,-20.1922,-18.6871,-13.9444,0,-11.8372	1/1:28:0,28,0:0:0:28,0:970,0:-87.6104,-8.42884,0,-87.6104,-8.42884,-87.6104	1/1:6:0,6,0:0:0:6,0:209,0:-19.1504,-1.80618,0,-19.1504,-1.80618,-19.1504	1/1:22:0,22,0:0:0:22,0:763,0:-68.9889,-6.62266,0,-68.9889,-6.62266,-68.9889	1/1:26:0,26,0:0:0:26,0:902,0:-81.4926,-7.82678,0,-81.4926,-7.82678,-81.4926	1/1:475:0,471,2:0:0:471,2:16456,68:-1480.42,-141.785,0,-1474.9,-136.259,-1474.3	1/1:323:0,322,0:0:0:322,0:11234,0:-1010.67,-96.9317,0,-1010.67,-96.9317,-1010.67	1/2:165:0,87,77:0:0:87,77:3033,2691:-465.522,-218.895,-192.705,-246.618,0,-223.438	1/1:9:0,9,0:0:0:9,0:320,0:-29.1426,-2.70927,0,-29.1426,-2.70927,-29.1426	1/2:312:0,185,122:0:0:185,122:6409,4311:-871.561,-351.117,-295.426,-520.469,0,-483.744	1/2:88:0,38,50:0:0:38,50:1355,1774:-255.345,-144.89,-133.451,-110.811,0,-95.7591	1/1:224:0,221,1:0:0:221,1:7641,36:-687.415,-66.5276,0,-684.477,-63.5619,-684.176	1/1:195:1,192,0:1:35:192,0:6705,0:-600.068,-54.9367,0,-600.369,-57.7978,-603.217	1/1:130:0,129,0:0:0:129,0:4485,0:-403.145,-38.8329,0,-403.145,-38.8329,-403.145	1/1:151:0,150,0:0:0:150,0:5192,0:-467.162,-45.1545,0,-467.162,-45.1545,-467.162	1/1:272:0,270,0:0:0:270,0:9248,0:-831.968,-81.2781,0,-831.968,-81.2781,-831.968	1/1:389:0,384,1:0:0:384,1:13361,36:-1202.02,-115.596,0,-1199.08,-112.645,-1198.78	1/1:243:0,242,0:0:0:242,0:8417,0:-757.172,-72.8493,0,-757.172,-72.8493,-757.172	1/2:373:0,169,201:0:0:169,201:5900,7092:-1057.4,-577.496,-526.622,-479.91,0,-419.403	1/1:334:0,327,3:0:0:327,3:11411,108:-1026.56,-98.4368,0,-1017.74,-89.6128,-1016.84	1/1:16:0,16,0:0:0:16,0:557,0:-50.4569,-4.81648,0,-50.4569,-4.81648,-50.4569	1/2:268:1,145,120:1:36:145,120:5074,4246:-755.447,-342.939,-302.227,-409.903,0,-376.717	1/1:87:0,86,0:0:0:86,0:3011,0:-270.982,-25.8886,0,-270.982,-25.8886,-270.982	1/1:41:0,41,0:0:0:41,0:1411,0:-127.254,-12.3422,0,-127.254,-12.3422,-127.254	1/2:315:0,156,158:0:0:156,158:5355,5585:-889.661,-454.874,-407.914,-434.794,0,-387.232	1/2:157:0,90,67:0:0:90,67:3139,2379:-449.481,-194.199,-167.106,-255.634,0,-235.465	1/1:13:0,12,1:0:0:12,1:421,36:-37.8654,-3.61236,0,-34.9273,-0.315115,-34.6263	1/1:30:0,30,0:0:0:30,0:1064,0:-96.0714,-9.0309,0,-96.0714,-9.0309,-96.0714	1/1:233:0,233,0:0:0:233,0:8073,0:-725.68,-70.14,0,-725.68,-70.14,-725.68	1/1:254:0,252,1:0:0:252,1:8764,32:-788.433,-75.8596,0,-785.854,-73.3012,-785.553	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:363:0,360,0:0:0:360,0:12523,0:-1126.54,-108.371,0,-1126.54,-108.371,-1126.54	1/1:444:0,434,4:0:0:434,4:15141,144:-1362.14,-130.647,0,-1350.39,-118.875,-1349.18	1/1:167:0,156,11:0:0:156,11:5386,388:-484.532,-46.9607,0,-452.939,-15.0152,-449.627	1/1:230:0,230,0:0:0:230,0:7893,0:-710.264,-69.2369,0,-710.264,-69.2369,-710.264	1/1:336:0,332,3:0:0:332,3:11489,108:-1033.59,-99.942,0,-1024.77,-91.0938,-1023.87	1/2:236:0,77,159:0:0:77,159:2705,5615:-677.77,-457.607,-434.428,-220.514,0,-172.65	1/1:84:0,83,1:0:0:83,1:2921,36:-262.731,-24.9855,0,-259.795,-21.69,-259.494	1/1:171:0,170,1:0:0:170,1:5879,36:-528.883,-51.1751,0,-525.945,-47.8779,-525.644	1/2:196:0,86,109:0:0:86,109:3011,3883:-561.434,-316.451,-290.562,-244.936,0,-212.124	1/1:66:0,62,4:0:0:62,4:2123,144:-190.965,-18.6639,0,-179.214,-6.55436,-178.01	1/1:202:0,201,0:0:0:201,0:6947,0:-624.96,-60.507,0,-624.96,-60.507,-624.96	1/1:171:0,171,0:0:0:171,0:5956,0:-536.164,-51.4761,0,-536.164,-51.4761,-536.164	1/1:497:0,495,2:0:0:495,2:17224,72:-1549.15,-149.01,0,-1543.28,-142.775,-1542.67	1/1:301:0,300,1:0:0:300,1:10506,36:-945.002,-90.309,0,-942.064,-87.0118,-941.763	1/2:215:0,115,100:0:0:115,100:4054,3556:-620.226,-290.147,-255.529,-330.432,0,-300.329	1/2:286:0,130,155:0:0:130,155:4485,5458:-808.749,-444.402,-405.268,-364.404,0,-317.745	1/1:21:0,21,0:0:0:21,0:742,0:-67.1039,-6.32163,0,-67.1039,-6.32163,-67.1039	1/1:245:0,242,1:0:0:242,1:8473,36:-762.172,-72.8493,0,-759.235,-69.9118,-758.934	1/1:292:0,291,0:0:0:291,0:10032,0:-902.553,-87.5997,0,-902.553,-87.5997,-902.553	1/1:532:0,527,2:0:0:527,2:18410,72:-1656.19,-158.643,0,-1650.32,-152.759,-1649.72	1/1:215:0,214,0:0:0:214,0:7503,0:-675.039,-64.4204,0,-675.039,-64.4204,-675.039	1/2:138:0,62,75:0:0:62,75:2178,2630:-391.37,-214.098,-195.434,-177.351,0,-154.774	1/2:177:0,84,92:0:0:84,92:2960,3253:-505.933,-264.937,-239.65,-240.989,0,-213.294	1/2:308:0,162,142:0:0:162,142:5579,5056:-865.272,-412.138,-363.371,-453.183,0,-410.437	1/1:102:0,102,0:0:0:102,0:3578,0:-322.225,-30.7051,0,-322.225,-30.7051,-322.225	1/1:176:0,175,1:0:0:175,1:6118,36:-550.371,-52.6803,0,-547.434,-49.383,-547.133	1/1:155:0,155,0:0:0:155,0:5444,0:-490.099,-46.6597,0,-490.099,-46.6597,-490.099	1/2:100:0,56,42:0:0:56,42:1980,1491:-282.741,-121.481,-104.623,-161.255,0,-148.612	1/2:169:0,91,78:0:0:91,78:3160,2749:-481.051,-224.17,-196.776,-257.231,0,-233.75	1/2:155:0,53,102:0:0:53,102:1861,3584:-443.529,-292.065,-276.111,-151.815,0,-121.109	1/1:225:0,223,1:0:0:223,1:7750,36:-696.665,-67.1297,0,-693.727,-64.1374,-693.426	1/1:254:0,254,0:0:0:254,0:8863,0:-797.669,-76.4616,0,-797.669,-76.4616,-797.669
chr03	20320634	.	CGTCTATG	TGTTTATA,CGTTTATG	101022	PASS	AB=0.504119,0.487644;ABP=3.18917,4.62012;AC=163,25;AF=0.867021,0.132979;AN=188;AO=4399,595;CIGAR=1X2M1X3M1X,3M1X4M;DP=5019;DPB=5022.75;DPRA=0,1.00571;EPP=9555.32,1295.04;EPPR=0;GTI=0;LEN=8,1;MEANALT=1.54255,2.39286;MQM=38.5238,59.721;MQMR=0;NS=94;NUMALT=2;ODDS=5.11904;PAIRED=0,0;PAIREDR=0;PAO=28,0;PQA=978,0;PQR=0;PRO=0;QA=153486,21163;QR=0;RO=0;RPL=0,0;RPP=9555.32,1295.04;RPPR=0;RPR=4399,595;RUN=1,1;SAF=0,0;SAP=9555.32,1295.04;SAR=4399,595;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:30:0,21,9:0:0:21,9:716,320:-80.9187,-26.0737,-19.7521,-54.8323,0,-52.123	1/2:59:0,32,26:0:0:32,26:1103,928:-158.918,-75.6862,-66.0532,-83.2547,0,-75.4279	1/2:119:0,54,64:0:0:54,64:1856,2262:-325.413,-184.285,-168.029,-141.185,0,-121.919	1/1:89:0,89,0:0:0:89,0:3105,0:-269.969,-26.7917,0,-269.969,-26.7917,-269.969	1/1:40:0,40,0:0:0:40,0:1408,0:-120.433,-12.0412,0,-120.433,-12.0412,-120.433	1/1:26:0,26,0:0:0:26,0:905,0:-77.6265,-7.82678,0,-77.6265,-7.82678,-77.6265	1/1:37:0,37,0:0:0:37,0:1306,0:-112.908,-11.1381,0,-112.908,-11.1381,-112.908	1/1:94:0,94,0:0:0:94,0:3321,0:-280.149,-28.2968,0,-280.149,-28.2968,-280.149	1/1:80:0,78,0:0:0:78,0:2741,0:-232.928,-23.4803,0,-232.928,-23.4803,-232.928	1/1:37:0,37,0:0:0:37,0:1317,0:-114.328,-11.1381,0,-114.328,-11.1381,-114.328	1/1:18:0,18,0:0:0:18,0:635,0:-55.3937,-5.41854,0,-55.3937,-5.41854,-55.3937	1/1:71:0,70,0:0:0:70,0:2465,0:-208.167,-21.0721,0,-208.167,-21.0721,-208.167	1/2:44:0,29,14:0:0:29,14:1020,504:-119.407,-41.2209,-32.491,-78.2903,0,-74.0759	1/1:31:0,31,0:0:0:31,0:1092,0:-95.0571,-9.33193,0,-95.0571,-9.33193,-95.0571	1/1:35:0,35,0:0:0:35,0:1222,0:-105.967,-10.5361,0,-105.967,-10.5361,-105.967	1/1:41:0,41,0:0:0:41,0:1426,0:-124.157,-12.3422,0,-124.157,-12.3422,-124.157	1/1:21:0,21,0:0:0:21,0:725,0:-61.2538,-6.32163,0,-61.2538,-6.32163,-61.2538	1/1:9:0,9,0:0:0:9,0:319,0:-27.4775,-2.70927,0,-27.4775,-2.70927,-27.4775	1/2:19:0,14,5:0:0:14,5:485,180:-52.293,-15.0469,-10.8325,-37.5978,0,-36.0927	1/1:100:0,98,0:0:0:98,0:3407,0:-294.209,-29.5009,0,-294.209,-29.5009,-294.209	1/1:194:0,194,0:0:0:194,0:6736,0:-583.34,-58.3998,0,-583.34,-58.3998,-583.34	1/1:102:0,102,0:0:0:102,0:3555,0:-294.779,-30.7051,0,-294.779,-30.7051,-294.779	1/1:48:0,48,0:0:0:48,0:1684,0:-145.504,-14.4494,0,-145.504,-14.4494,-145.504	1/1:25:0,25,0:0:0:25,0:859,0:-74.071,-7.52575,0,-74.071,-7.52575,-74.071	1/1:89:0,89,0:0:0:89,0:3128,0:-268.42,-26.7917,0,-268.42,-26.7917,-268.42	1/2:124:0,64,58:0:0:64,58:2229,2064:-332.438,-168.238,-148.972,-164.252,0,-146.793	1/1:160:0,160,0:0:0:160,0:5574,0:-481.205,-48.1648,0,-481.205,-48.1648,-481.205	1/1:17:0,17,0:0:0:17,0:590,0:-51.5769,-5.11751,0,-51.5769,-5.11751,-51.5769	1/1:110:0,110,0:0:0:110,0:3863,0:-316.556,-33.1133,0,-316.556,-33.1133,-316.556	1/1:49:0,48,0:0:0:48,0:1670,0:-144.386,-14.4494,0,-144.386,-14.4494,-144.386	1/1:69:0,69,0:0:0:69,0:2402,0:-207.866,-20.7711,0,-207.866,-20.7711,-207.866	1/2:8:0,5,3:0:0:5,3:180,104:-22.8391,-8.79971,-7.29456,-14.3855,0,-13.4824	1/1:10:0,10,0:0:0:10,0:357,0:-31.2306,-3.0103,0,-31.2306,-3.0103,-31.2306	1/1:5:0,5,0:0:0:5,0:173,0:-15.1396,-1.50515,0,-15.1396,-1.50515,-15.1396	1/1:7:0,5,0:0:0:5,0:174,0:-14.8347,-1.50515,0,-14.8347,-1.50515,-14.8347	1/1:18:0,18,0:0:0:18,0:622,0:-52.0023,-5.41854,0,-52.0023,-5.41854,-52.0023	1/1:96:0,96,0:0:0:96,0:3356,0:-278.644,-28.8989,0,-278.644,-28.8989,-278.644	1/1:65:0,65,0:0:0:65,0:2274,0:-196.755,-19.567,0,-196.755,-19.567,-196.755	1/2:35:0,19,15:0:0:19,15:668,536:-93.5103,-43.7536,-38.034,-49.7936,0,-45.2782	1/1:6:0,6,0:0:0:6,0:212,0:-18.7079,-1.80618,0,-18.7079,-1.80618,-18.7079	1/2:39:0,24,15:0:0:24,15:829,540:-108.53,-44.0609,-36.8361,-64.4596,0,-59.9442	1/2:20:0,11,8:0:0:11,8:373,284:-52.3059,-23.1363,-19.825,-29.156,0,-26.7477	1/1:103:0,101,1:0:0:101,1:3485,36:-302.322,-30.404,0,-299.384,-27.4498,-299.083	1/1:21:0,21,0:0:0:21,0:732,0:-63.96,-6.32163,0,-63.96,-6.32163,-63.96	1/1:27:0,27,0:0:0:27,0:928,0:-79.1652,-8.12781,0,-79.1652,-8.12781,-79.1652	1/1:76:0,76,0:0:0:76,0:2674,0:-222.473,-22.8783,0,-222.473,-22.8783,-222.473	1/1:62:0,61,0:0:0:61,0:2132,0:-181.261,-18.3628,0,-181.261,-18.3628,-181.261	1/1:106:0,106,0:0:0:106,0:3725,0:-323.562,-31.9092,0,-323.562,-31.9092,-323.562	1/1:70:0,70,0:0:0:70,0:2452,0:-211.404,-21.0721,0,-211.404,-21.0721,-211.404	1/2:41:0,20,20:0:0:20,20:708,720:-113.313,-58.7488,-52.7282,-54.5539,0,-48.5333	1/1:106:0,106,0:0:0:106,0:3727,0:-310.609,-31.9092,0,-310.609,-31.9092,-310.609	1/1:12:0,12,0:0:0:12,0:418,0:-36.6028,-3.61236,0,-36.6028,-3.61236,-36.6028	1/2:97:0,61,35:0:0:61,35:2133,1260:-263.547,-102.89,-84.5272,-160.729,0,-150.193	1/1:22:0,21,0:0:0:21,0:745,0:-61.5536,-6.32163,0,-61.5536,-6.32163,-61.5536	1/1:5:0,5,0:0:0:5,0:174,0:-15.1676,-1.50515,0,-15.1676,-1.50515,-15.1676	1/2:57:0,27,30:0:0:27,30:930,1076:-160.563,-87.9875,-79.8596,-72.9196,0,-63.8887	1/2:65:0,30,35:0:0:30,35:1048,1222:-180.435,-99.7435,-90.7126,-81.0316,0,-70.4956	1/2:11:0,3,8:0:0:3,8:96,273:-29.774,-22.4919,-21.5889,-7.5958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chr03	20479020	.	G	T	57903.6	PASS	AB=0.515904;ABP=13.7162;AC=24;AF=0.12766;AN=188;AO=2546;CIGAR=1X;DP=19231;DPB=19231;DPRA=1.42815;EPP=5531.58;EPPR=36197.1;GTI=0;LEN=1;MEANALT=1.16279;MQM=59.9756;MQMR=59.9942;NS=94;NUMALT=1;ODDS=5.06559;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90618;QR=587077;RO=16676;RPL=1274;RPP=3.01371;RPPR=143.31;RPR=1272;RUN=1;SAF=1274;SAP=3.01371;SAR=1272;SRF=8857;SRP=143.31;SRR=7819;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:78:48,30:48:1720:30:1072:-73.3121,0,-131.605	0/1:205:109,96:109:3866:96:3418:-246.123,0,-286.426	0/1:235:125,110:125:4430:110:3915:-281.803,0,-328.13	0/0:521:520,1:520:18354:1:36:0,-153.238,-1647.87	0/0:49:48,1:48:1699:1:36:0,-11.1522,-149.597	0/0:52:52,0:52:1826:0:0:0,-15.6536,-164.62	0/0:217:217,0:217:7630:0:0:0,-65.3235,-686.745	0/0:355:354,1:354:12512:1:36:0,-103.267,-1122.33	0/0:294:294,0:294:10372:0:0:0,-88.5028,-933.417	0/0:244:243,1:243:8528:1:36:0,-69.853,-763.935	0/0:98:98,0:98:3459:0:0:0,-29.5009,-311.521	0/0:216:216,0:216:7601:0:0:0,-65.0225,-684.143	0/1:163:88,75:88:3102:75:2680:-192.378,0,-230.342	0/0:129:129,0:129:4503:0:0:0,-38.8329,-405.442	0/0:137:137,0:137:4836:0:0:0,-41.2411,-435.397	0/0:122:122,0:122:4272:0:0:0,-36.7257,-384.66	0/0:95:94,1:94:3313:1:22:0,-26.3979,-296.191	0/0:94:94,0:94:3317:0:0:0,-28.2968,-298.75	0/1:78:39,39:39:1365:39:1404:-103.179,0,-99.6661	0/0:543:542,1:542:19063:1:36:0,-159.861,-1711.66	0/0:443:441,1:441:15441:1:36:0,-129.817,-1385.83	0/0:168:168,0:168:5916:0:0:0,-50.573,-532.554	0/0:203:203,0:203:7120:0:0:0,-61.1091,-640.866	0/0:148:148,0:148:5261:0:0:0,-44.5524,-473.629	0/0:122:122,0:122:4315:0:0:0,-36.7257,-388.529	0/1:719:340,378:340:11907:378:13436:-992.54,0,-855.01	0/0:531:530,1:530:18776:1:36:0,-156.249,-1685.82	0/0:87:87,0:87:3010:0:0:0,-26.1896,-271.13	0/0:550:549,0:549:19452:0:0:0,-165.265,-1749.87	0/0:198:196,2:196:6912:2:72:0,-52.7672,-615.317	0/0:245:245,0:245:8599:0:0:0,-73.7523,-773.923	0/1:6:3,3:3:104:3:108:-8.26899,0,-7.89663	0/0:22:22,0:22:780:0:0:0,-6.62266,-70.523	0/0:4:4,0:4:120:0:0:0,-1.20412,-11.0966	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:492:492,0:492:17216:0:0:0,-148.107,-1549.09	0/0:256:255,1:255:8940:1:36:0,-73.4654,-800.998	0/1:88:48,40:48:1676:40:1432:-102.687,0,-124.631	0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7255	0/1:309:176,133:176:6200:133:4734:-333.197,0,-465.084	0/1:80:41,39:41:1443:39:1396:-101.857,0,-106.083	0/0:229:228,0:228:7968:0:0:0,-68.6348,-716.798	0/0:182:182,0:182:6302:0:0:0,-54.7875,-567.284	0/0:149:149,0:149:5203:0:0:0,-44.8535,-468.416	0/0:238:238,0:238:8427:0:0:0,-71.6451,-758.441	0/0:224:224,0:224:7939:0:0:0,-67.4307,-714.521	0/0:278:276,2:276:9727:2:68:0,-77.2886,-868.993	0/0:233:233,0:233:8170:0:0:0,-70.14,-735.329	0/1:340:160,179:160:5639:179:6394:-473.14,0,-405.224	0/0:327:327,0:327:11534:0:0:0,-98.4368,-1037.94	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:214:103,111:103:3643:111:3956:-291.813,0,-263.658	0/0:116:116,0:116:4116:0:0:0,-34.9195,-370.626	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:332:155,177:155:5515:177:6280:-465.354,0,-396.535	0/1:112:52,60:52:1819:60:2129:-158.161,0,-130.272	0/0:16:16,0:16:563:0:0:0,-4.81648,-50.9992	0/0:39:39,0:39:1387:0:0:0,-11.7402,-125.128	0/0:194:194,0:194:6802:0:0:0,-58.3998,-612.214	0/0:191:190,1:190:6656:1:36:0,-53.8985,-595.529	0/0:8:8,0:8:280:0:0:0,-2.40824,-25.5393	0/0:432:432,0:432:15313:0:0:0,-130.045,-1377.9	0/0:367:365,2:365:12874:2:72:0,-103.641,-1151.66	0/0:193:189,4:189:6642:4:144:0,-44.7852,-584.549	0/0:147:147,0:147:5173:0:0:0,-44.2514,-465.714	0/0:504:496,8:496:17549:8:273:0,-126.83,-1554.15	0/1:371:111,260:111:3954:260:9259:-721.597,0,-244.325	0/0:57:57,0:57:2000:0:0:0,-17.1587,-180.272	0/0:188:187,1:187:6629:1:32:0,-53.3943,-593.497	0/1:140:64,75:64:2210:75:2653:-196.813,0,-156.958	0/0:49:49,0:49:1751:0:0:0,-14.7505,-157.873	0/0:214:214,0:214:7570:0:0:0,-64.4204,-681.346	0/0:132:132,0:132:4642:0:0:0,-39.736,-417.942	0/0:387:387,0:387:13605:0:0:0,-116.499,-1224.26	0/0:346:344,1:344:12165:1:36:0,-100.592,-1091.14	0/1:84:51,33:51:1795:33:1184:-81.5818,0,-136.545	0/1:251:118,133:118:4160:133:4776:-354.437,0,-299.025	0/0:21:21,0:21:740:0:0:0,-6.32163,-66.9234	0/0:277:277,0:277:9822:0:0:0,-83.3853,-883.932	0/0:269:269,0:269:9453:0:0:0,-80.9771,-850.75	0/0:628:628,0:628:22107:0:0:0,-189.047,-1989.09	0/0:162:161,1:161:5606:1:27:0,-46.0671,-501.97	0/1:155:80,75:80:2797:75:2662:-193.166,0,-205.31	0/1:189:107,81:107:3714:81:2897:-204.011,0,-277.507	0/1:351:172,179:172:6007:179:6365:-467.279,0,-435.085	0/0:71:71,0:71:2466:0:0:0,-21.3731,-222.191	0/0:169:168,1:168:5949:1:21:0,-48.7746,-533.425	0/0:151:151,0:151:5282:0:0:0,-45.4555,-475.524	0/1:62:29,33:29:1024:33:1184:-88.2045,0,-73.8087	0/1:129:70,58:70:2403:58:2059:-146.689,0,-177.631	0/1:182:65,117:65:2286:117:4134:-317.461,0,-151.214	0/0:242:242,0:242:8479:0:0:0,-72.8493,-763.122	0/0:249:249,0:249:8705:0:0:0,-74.9565,-783.44
chr03	20955308	.	G	C	25844.8	PASS	AB=0.52059;ABP=13.741;AC=24;AF=0.12766;AN=188;AO=1524;CIGAR=1X;DP=11764;DPB=11764;DPRA=1.05581;EPP=3312.33;EPPR=22089.2;GTI=0;LEN=1;MEANALT=1.17241;MQM=59.6667;MQMR=55.8846;NS=94;NUMALT=1;ODDS=6.50673;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54357;QR=363991;RO=10231;RPL=0;RPP=3312.33;RPPR=22089.2;RPR=1524;RUN=1;SAF=0;SAP=3312.33;SAR=1524;SRF=0;SRP=22219.3;SRR=10231;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:26,44:26:921:44:1576:-120.507,0,-61.75	0/1:103:44,59:44:1557:59:2112:-159.318,0,-109.376	0/1:241:118,123:118:4178:123:4391:-322.777,0,-303.074	0/0:369:369,0:369:13130:0:0:0,-111.08,-1177.65	0/0:83:83,0:83:2971:0:0:0,-24.9855,-266.492	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.626	0/0:108:108,0:108:3854:0:0:0,-32.5112,-346.512	0/0:201:199,1:199:7052:1:36:0,-56.9723,-630.072	0/0:137:137,0:137:4878:0:0:0,-41.2411,-438.86	0/1:67:32,35:32:1144:35:1236:-91.3725,0,-82.2293	0/0:41:41,0:41:1454:0:0:0,-12.3422,-130.785	0/0:87:87,0:87:3084:0:0:0,-26.1896,-276.402	0/1:73:44,29:44:1552:29:1029:-70.946,0,-117.247	0/0:66:66,0:66:2319:0:0:0,-19.868,-208.769	0/0:78:78,0:78:2768:0:0:0,-23.4803,-248.564	0/0:47:47,0:47:1688:0:0:0,-14.1484,-151.785	0/0:27:27,0:27:968:0:0:0,-8.12781,-86.4599	0/0:30:30,0:30:1052:0:0:0,-9.0309,-94.8923	0/1:29:18,11:18:623:11:396:-27.2529,0,-46.7904	0/0:306:305,0:305:10859:0:0:0,-91.8141,-973.723	0/0:211:211,0:211:7506:0:0:0,-63.5173,-674.222	0/0:253:253,0:253:8999:0:0:0,-76.1606,-807.831	0/0:212:212,0:212:7553:0:0:0,-63.8184,-678.366	0/0:65:65,0:65:2327:0:0:0,-19.5669,-209.544	0/0:110:110,0:110:3931:0:0:0,-33.1133,-353.532	0/1:307:148,159:148:5265:159:5656:-416.247,0,-380.605	0/0:342:342,0:342:12198:0:0:0,-102.952,-1096.12	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0396	0/0:372:372,0:372:13201:0:0:0,-111.983,-1185.53	0/0:168:165,3:165:5893:3:108:0,-40.4979,-518.536	0/0:198:198,0:198:7020:0:0:0,-59.6039,-630.857	0/1:14:11,3:11:387:3:108:-5.86075,0,-30.6198	0/0:29:29,0:29:1027:0:0:0,-8.72987,-92.0824	0/0:24:24,0:24:864:0:0:0,-7.22472,-75.9657	0/0:30:30,0:30:1053:0:0:0,-9.0309,-93.8904	0/0:43:43,0:43:1516:0:0:0,-12.9443,-134.911	0/0:190:190,0:190:6726:0:0:0,-57.1957,-604.93	0/0:180:180,0:180:6390:0:0:0,-54.1854,-573.823	0/1:62:36,26:36:1277:26:936:-65.891,0,-95.8475	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.4118	0/1:171:107,64:107:3819:64:2284:-154.26,0,-291.884	0/1:33:12,21:12:424:21:755:-58.3394,0,-28.4731	0/0:201:201,0:201:7178:0:0:0,-60.507,-645.309	0/0:55:55,0:55:1972:0:0:0,-16.5566,-177.468	0/0:50:50,0:50:1745:0:0:0,-15.0515,-157.138	0/0:142:142,0:142:5067:0:0:0,-42.7463,-454.684	0/0:164:164,0:164:5858:0:0:0,-49.3689,-526.133	0/0:231:231,0:231:8261:0:0:0,-69.5379,-742.743	0/0:122:122,0:122:4307:0:0:0,-36.7257,-386.851	0/1:162:89,72:89:3157:72:2579:-183.531,0,-234.911	0/0:164:163,1:163:5812:1:36:0,-45.7706,-518.707	0/0:26:26,0:26:928:0:0:0,-7.82678,-82.0744	0/1:183:88,95:88:3129:95:3398:-250.926,0,-226.414	0/0:140:140,0:140:4991:0:0:0,-42.1442,-448.816	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.3252	0/1:241:118,122:118:4176:122:4335:-317.811,0,-302.895	0/1:88:49,39:49:1739:39:1386:-98.4949,0,-129.63	0/0:15:15,0:15:536:0:0:0,-4.51545,-47.6009	0/0:12:12,0:12:432:0:0:0,-3.61236,-38.9985	0/0:148:148,0:148:5259:0:0:0,-44.5524,-471.636	0/0:112:112,0:112:3984:0:0:0,-33.7154,-358.267	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2054	0/0:244:244,0:244:8705:0:0:0,-73.4513,-782.324	0/0:237:236,1:236:8393:1:36:0,-67.7458,-750.127	0/0:83:82,1:82:2882:1:32:0,-21.7862,-256.238	0/0:137:137,0:137:4881:0:0:0,-41.2411,-438.623	0/0:327:327,0:327:11627:0:0:0,-98.4368,-1044.35	0/1:268:78,190:78:2792:190:6779:-529.471,0,-169.726	0/0:36:36,0:36:1288:0:0:0,-10.8371,-115.613	0/0:78:78,0:78:2791:0:0:0,-23.4803,-251.049	0/0:32:32,0:32:1144:0:0:0,-9.63296,-102.957	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.733	0/0:206:206,0:206:7318:0:0:0,-62.0122,-656.911	0/0:131:131,0:131:4644:0:0:0,-39.4349,-417.406	0/0:140:140,0:140:4940:0:0:0,-42.1442,-444.276	0/0:276:276,0:276:9849:0:0:0,-83.0843,-883.369	0/1:184:73,110:73:2599:110:3935:-298.838,0,-178.234	0/1:153:69,84:69:2472:84:3012:-225.233,0,-175.59	0/0:50:50,0:50:1788:0:0:0,-15.0515,-158.551	0/0:192:192,0:192:6833:0:0:0,-57.7978,-614.292	0/0:231:231,0:231:8224:0:0:0,-69.5379,-736.411	0/0:252:251,0:251:8950:0:0:0,-75.5585,-802.745	0/0:60:60,0:60:2131:0:0:0,-18.0618,-191.629	0/1:55:28,27:28:1004:27:968:-70.876,0,-73.7837	0/1:42:20,22:20:720:22:783:-58.145,0,-52.4313	0/1:125:70,55:70:2495:55:1950:-138.139,0,-186.569	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.5567	0/0:60:60,0:60:2131:0:0:0,-18.0618,-191.934	0/0:69:69,0:69:2447:0:0:0,-20.7711,-219.42	0/1:38:28,10:28:1008:10:352:-20.5791,0,-78.9684	0/1:105:52,53:52:1825:53:1874:-137.329,0,-132.725	0/1:97:33,64:33:1169:64:2279:-176.162,0,-76.0746	0/0:180:180,0:180:6403:0:0:0,-54.1854,-574.906	0/0:87:87,0:87:3103:0:0:0,-26.1896,-279.075
chr03	20955333	.	GGGTCAC	AGGCCAT,GGGCCAT	261314	PASS	AB=0.472782,0.518481;ABP=22.1595,11.8392;AC=164,24;AF=0.87234,0.12766;AN=188;AO=10397,1551;CIGAR=1X2M1X2M1X,3M1X2M1X;DP=12045;DPB=12046.4;DPRA=0,1.21206;EPP=22579.8,3370.96;EPPR=5.18177;GTI=0;LEN=7,7;MEANALT=2.2766,3.03333;MQM=55.8534,59.6634;MQMR=60;NS=94;NUMALT=2;ODDS=5.90864;PAIRED=0,0;PAIREDR=0;PAO=4,1.5;PQA=138,0;PQR=0;PRO=1.5;QA=366922,54801;QR=32;RO=1;RPL=10397,1551;RPP=22579.8,3370.96;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=0,0;SAP=22579.8,3370.96;SAR=10397,1551;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:74:0,26,47:0:0:26,47:923,1681:-212.054,-136.871,-129.044,-75.1795,0,-61.0311	1/2:105:0,44,61:0:0:44,61:1548,2160:-302.257,-176.281,-163.036,-126.329,0,-107.966	1/2:246:0,118,127:0:0:118,127:4168,4483:-703.908,-365.002,-329.481,-338.899,0,-300.668	1/1:379:0,378,0:0:0:378,0:13342,0:-1196.21,-113.789,0,-1196.21,-113.789,-1196.21	1/1:83:0,83,0:0:0:83,0:2963,0:-265.818,-24.9855,0,-265.818,-24.9855,-265.818	1/1:39:0,39,0:0:0:39,0:1385,0:-124.639,-11.7402,0,-124.639,-11.7402,-124.639	1/1:109:0,109,0:0:0:109,0:3849,0:-346.098,-32.8123,0,-346.098,-32.8123,-346.098	1/1:208:0,207,1:0:0:207,1:7289,28:-654.763,-62.3132,0,-652.545,-60.1344,-652.244	1/1:139:0,137,0:0:0:137,0:4834,0:-434.606,-41.2411,0,-434.606,-41.2411,-434.606	1/2:67:0,31,35:0:0:31,35:1081,1240:-188.181,-101.115,-91.7835,-87.161,0,-76.625	1/1:42:0,42,0:0:0:42,0:1489,0:-133.952,-12.6433,0,-133.952,-12.6433,-133.952	1/1:87:0,87,0:0:0:87,0:3068,0:-275.618,-26.1896,0,-275.618,-26.1896,-275.618	1/2:77:0,46,31:0:0:46,31:1645,1113:-224.491,-91.1498,-77.3024,-133.699,0,-124.367	1/1:68:0,67,0:0:0:67,0:2337,0:-210.039,-20.169,0,-210.039,-20.169,-210.039	1/1:79:0,78,0:0:0:78,0:2742,0:-245.984,-23.4803,0,-245.984,-23.4803,-245.984	1/1:47:0,47,0:0:0:47,0:1667,0:-149.922,-14.1484,0,-149.922,-14.1484,-149.922	1/1:27:0,27,0:0:0:27,0:960,0:-85.7996,-8.12781,0,-85.7996,-8.12781,-85.7996	1/1:31:0,31,0:0:0:31,0:1090,0:-98.315,-9.33193,0,-98.315,-9.33193,-98.315	1/2:29:0,18,11:0:0:18,11:627,392:-82.3793,-32.309,-26.8905,-50.4214,0,-47.11	1/1:313:0,310,0:0:0:310,0:10970,0:-984.45,-93.3193,0,-984.45,-93.3193,-984.45	1/1:215:0,214,0:0:0:214,0:7554,0:-678.326,-64.4204,0,-678.326,-64.4204,-678.326	1/1:264:0,262,1:0:0:262,1:9283,35:-833.536,-78.8699,0,-830.689,-76.0267,-830.388	1/1:219:0,217,0:0:0:217,0:7638,0:-686.06,-65.3235,0,-686.06,-65.3235,-686.06	1/1:67:0,66,0:0:0:66,0:2329,0:-209.457,-19.868,0,-209.457,-19.868,-209.457	1/1:110:0,110,0:0:0:110,0:3910,0:-351.685,-33.1133,0,-351.685,-33.1133,-351.685	1/2:318:0,154,164:0:0:154,164:5400,5731:-904.91,-466.371,-420.013,-438.889,0,-389.52	1/1:350:0,348,0:0:0:348,0:12333,0:-1108.07,-104.758,0,-1108.07,-104.758,-1108.07	1/1:27:0,27,0:0:0:27,0:954,0:-86.1411,-8.12781,0,-86.1411,-8.12781,-86.1411	1/1:388:0,384,0:0:0:384,0:13540,0:-1215.73,-115.596,0,-1215.73,-115.596,-1215.73	1/1:172:0,167,3:0:0:167,3:5890,108:-528.195,-50.272,0,-519.382,-41.4256,-518.479	1/1:201:0,201,0:0:0:201,0:7061,0:-634.38,-60.507,0,-634.38,-60.507,-634.38	1/2:15:0,12,3:0:0:12,3:421,108:-42.9853,-9.17208,-5.55972,-34.1704,0,-33.2674	1/1:29:0,29,0:0:0:29,0:1033,0:-92.6365,-8.72987,0,-92.6365,-8.72987,-92.6365	1/1:24:0,24,0:0:0:24,0:855,0:-75.296,-7.22472,0,-75.296,-7.22472,-75.296	1/1:31:0,31,0:0:0:31,0:1072,0:-95.3551,-9.33193,0,-95.3551,-9.33193,-95.3551	1/1:43:0,42,0:0:0:42,0:1481,0:-131.81,-12.6433,0,-131.81,-12.6433,-131.81	1/1:191:0,189,0:0:0:189,0:6706,0:-602.795,-56.8947,0,-602.795,-56.8947,-602.795	1/1:183:0,181,0:0:0:181,0:6402,0:-574.584,-54.4864,0,-574.584,-54.4864,-574.584	1/2:61:0,36,25:0:0:36,25:1275,885:-175.643,-72.4413,-61.6042,-103.555,0,-96.0288	1/1:16:0,16,0:0:0:16,0:563,0:-50.6939,-4.81648,0,-50.6939,-4.81648,-50.6939	1/2:172:0,105,64:0:0:105,64:3738,2254:-487.666,-183.541,-151.933,-304.176,0,-284.91	1/2:33:0,12,21:0:0:12,21:424,755:-96.3966,-61.9508,-58.3385,-34.8007,0,-28.479	1/1:203:0,203,0:0:0:203,0:7170,0:-644.408,-61.1091,0,-644.408,-61.1091,-644.408	1/1:54:0,54,0:0:0:54,0:1921,0:-172.932,-16.2556,0,-172.932,-16.2556,-172.932	1/1:57:0,57,0:0:0:57,0:2009,0:-180.807,-17.1587,0,-180.807,-17.1587,-180.807	1/1:144:0,139,0:0:0:139,0:4906,0:-440.365,-41.8432,0,-440.365,-41.8432,-440.365	1/1:169:0,168,0:0:0:168,0:5930,0:-532.488,-50.573,0,-532.488,-50.573,-532.488	1/1:244:0,243,0:0:0:243,0:8586,0:-771.622,-73.1503,0,-771.622,-73.1503,-771.622	1/1:126:0,125,0:0:0:125,0:4410,0:-395.878,-37.6288,0,-395.878,-37.6288,-395.878	1/2:164:0,92,72:0:0:92,72:3251,2533:-470.617,-206.54,-178.845,-264.429,0,-242.755	1/1:168:0,166,1:0:0:166,1:5862,36:-526.806,-49.971,0,-523.868,-47.0331,-523.567	1/1:27:0,27,0:0:0:27,0:951,0:-84.178,-8.12781,0,-84.178,-8.12781,-84.178	1/2:182:0,87,89:0:0:87,89:3058,3136:-503.95,-255.3,-229.11,-248.643,0,-221.851	1/1:145:0,143,0:0:0:143,0:5021,0:-451.17,-43.0473,0,-451.17,-43.0473,-451.17	1/1:15:0,15,0:0:0:15,0:533,0:-48.0143,-4.51545,0,-48.0143,-4.51545,-48.0143	1/2:251:0,121,126:0:0:121,126:4270,4500:-713.969,-366.854,-330.429,-347.123,0,-309.193	1/2:90:0,49,38:0:0:49,38:1713,1324:-246.473,-107.699,-92.9484,-138.806,0,-127.367	1/1:16:0,16,0:0:0:16,0:564,0:-50.1334,-4.81648,0,-50.1334,-4.81648,-50.1334	1/1:13:0,13,0:0:0:13,0:456,0:-41.1494,-3.91339,0,-41.1494,-3.91339,-41.1494	1/1:150:0,149,0:0:0:149,0:5242,0:-469.93,-44.8535,0,-469.93,-44.8535,-469.93	1/1:112:0,110,0:0:0:110,0:3899,0:-350.433,-33.1133,0,-350.433,-33.1133,-350.433	1/1:8:0,8,0:0:0:8,0:286,0:-26.0245,-2.40824,0,-26.0245,-2.40824,-26.0245	1/1:252:0,250,0:0:0:250,0:8794,0:-789.727,-75.2575,0,-789.727,-75.2575,-789.727	1/1:242:0,238,1:0:0:238,1:8401,36:-754.235,-71.6451,0,-751.298,-68.7067,-750.997	1/1:85:0,84,0:0:0:84,0:2953,0:-265.481,-25.2865,0,-265.481,-25.2865,-265.481	1/1:139:0,138,0:0:0:138,0:4897,0:-439.773,-41.5421,0,-439.773,-41.5421,-439.773	1/1:334:0,330,1:0:0:330,1:11662,36:-1047.22,-99.3399,0,-1044.29,-96.3997,-1043.99	1/2:275:0,82,193:0:0:82,193:2882,6836:-790.221,-556.705,-532.021,-233.867,0,-175.768	1/1:37:0,36,0:0:0:36,0:1279,0:-114.485,-10.8371,0,-114.485,-10.8371,-114.485	1/1:82:0,80,0:0:0:80,0:2794,0:-251.15,-24.0824,0,-251.15,-24.0824,-251.15	1/1:33:0,33,0:0:0:33,0:1164,0:-104.886,-9.93399,0,-104.886,-9.93399,-104.886	1/1:33:0,33,0:0:0:33,0:1149,0:-103.365,-9.93399,0,-103.365,-9.93399,-103.365	1/1:208:0,205,0:0:0:205,0:7243,0:-650.224,-61.7112,0,-650.224,-61.7112,-650.224	1/1:133:0,132,0:0:0:132,0:4647,0:-417.437,-39.736,0,-417.437,-39.736,-417.437	1/1:145:0,144,0:0:0:144,0:5039,0:-453.024,-43.3483,0,-453.024,-43.3483,-453.024	1/1:281:0,279,0:0:0:279,0:9891,0:-886.882,-83.9874,0,-886.882,-83.9874,-886.882	1/2:188:0,74,113:0:0:74,113:2581,4002:-535.099,-325.969,-303.693,-209.121,0,-175.105	1/2:156:0,70,85:0:0:70,85:2448,3004:-442.94,-244.752,-223.679,-198.297,0,-172.709	1/1:51:0,51,0:0:0:51,0:1780,0:-158.112,-15.3525,0,-158.112,-15.3525,-158.112	1/1:197:0,196,0:0:0:196,0:6918,0:-621.614,-59.0019,0,-621.614,-59.0019,-621.614	1/1:241:0,239,0:0:0:239,0:8384,0:-751.685,-71.9462,0,-751.685,-71.9462,-751.685	1/1:257:0,254,0:0:0:254,0:8968,0:-804.579,-76.4616,0,-804.579,-76.4616,-804.579	1/1:62:0,62,0:0:0:62,0:2179,0:-195.979,-18.6639,0,-195.979,-18.6639,-195.979	1/2:57:0,29,27:0:0:29,27:1032,964:-162.418,-78.6819,-69.952,-83.8265,0,-75.6987	1/2:43:0,20,22:0:0:20,22:707,782:-121.246,-63.7164,-57.6958,-57.524,0,-50.9013	1/2:128:0,69,57:0:0:69,57:2435,1997:-360.233,-162.49,-141.718,-197.747,0,-180.588	1/1:20:0,20,0:0:0:20,0:703,0:-63.5011,-6.0206,0,-63.5011,-6.0206,-63.5011	1/1:62:0,62,0:0:0:62,0:2192,0:-197.421,-18.6639,0,-197.421,-18.6639,-197.421	1/1:69:0,68,0:0:0:68,0:2416,0:-216.68,-20.47,0,-216.68,-20.47,-216.68	1/2:38:1,27,10:1:32:27,10:966,352:-103.97,-26.1093,-20.5569,-75.6159,0,-75.1827	1/2:110:0,52,58:0:0:52,58:1843,2063:-318.423,-168.481,-152.828,-150.296,0,-132.836	1/2:97:0,33,64:0:0:33,64:1166,2227:-276.148,-181.421,-171.487,-95.0777,0,-75.8118	1/1:184:0,182,0:0:0:182,0:6426,0:-576.924,-54.7875,0,-576.924,-54.7875,-576.924	1/1:90:0,88,0:0:0:88,0:3106,0:-279.013,-26.4906,0,-279.013,-26.4906,-279.013
chr03	20990167	.	G	A	97916.2	PASS	AB=0.565985;ABP=43.7032;AC=164;AF=0.87234;AN=188;AO=4374;CIGAR=1X;DP=4845;DPB=4845;DPRA=0;EPP=9501.03;EPPR=1023.6;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9463;MQMR=59.9277;NS=94;NUMALT=1;ODDS=8.0465;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=156631;QR=16836;RO=470;RPL=4374;RPP=9501.03;RPPR=1023.6;RPR=0;RUN=1;SAF=0;SAP=9501.03;SAR=4374;SRF=0;SRP=1023.6;SRR=470;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:10,17:10:360:17:612:-47.2856,0,-24.6165	0/1:17:10,7:10:356:7:252:-17.9114,0,-27.2637	0/1:40:22,18:22:788:18:629:-44.8926,0,-59.1954	1/1:104:0,104:0:0:104:3736:-336.282,-31.3071,0	1/1:29:0,29:0:0:29:1036:-93.5539,-8.72987,0	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	1/1:50:0,50:0:0:50:1792:-161.562,-15.0515,0	1/1:60:0,60:0:0:60:2144:-193.228,-18.0618,0	1/1:89:0,89:0:0:89:3168:-285.343,-26.7917,0	0/1:58:29,29:29:1040:29:1044:-76.8151,0,-76.4546	1/1:14:0,14:0:0:14:495:-44.883,-4.21442,0	1/1:71:0,71:0:0:71:2548:-229.57,-21.3731,0	0/1:40:19,21:19:676:21:756:-56.326,0,-49.1268	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:42:0,42:0:0:42:1504:-135.655,-12.6433,0	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:17:6,11:6:212:11:392:-30.5025,0,-14.3073	1/1:96:0,96:0:0:96:3452:-310.891,-28.8989,0	1/1:109:0,109:0:0:109:3901:-350.965,-32.8123,0	1/1:79:0,79:0:0:79:2836:-255.478,-23.7814,0	1/1:75:0,75:0:0:75:2669:-240.441,-22.5773,0	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	1/1:51:0,51:0:0:51:1836:-165.521,-15.3525,0	0/1:165:66,98:66:2364:98:3524:-267.639,0,-163.29	1/1:162:0,162:0:0:162:5800:-522.085,-48.7669,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:130:0,130:0:0:130:4659:-419.441,-39.1339,0	0/1:50:5,45:5:180:45:1577:-127.166,0,-1.50056	1/1:89:0,89:0:0:89:3196:-287.863,-26.7917,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:10:0,10:0:0:10:352:-32.0182,-3.0103,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:147:0,147:0:0:147:5265:-473.986,-44.2514,0	1/1:72:0,72:0:0:72:2574:-231.907,-21.6742,0	0/1:17:5,12:5:180:12:432:-34.1037,0,-11.4346	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:59:24,35:24:848:35:1229:-93.1405,0,-58.8789	0/1:19:7,12:7:252:12:432:-33.5016,0,-17.3094	1/1:53:0,53:0:0:53:1897:-171.007,-15.9546,0	1/1:27:0,27:0:0:27:972:-87.797,-8.12781,0	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	1/1:94:0,94:0:0:94:3372:-303.679,-28.2968,0	1/1:64:0,64:0:0:64:2292:-206.532,-19.2659,0	1/1:115:0,115:0:0:115:4089:-368.193,-34.6185,0	1/1:44:0,44:0:0:44:1584:-142.838,-13.2453,0	0/1:30:12,18:12:432:18:648:-49.621,0,-30.1879	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:32:9,23:9:320:23:828:-65.2112,0,-19.5094	1/1:58:0,58:0:0:58:2080:-187.47,-17.4597,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/1:50:22,28:22:792:28:996:-74.9034,0,-56.5542	0/1:22:10,12:10:360:12:426:-32.0547,0,-26.1193	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:56:0,56:0:0:56:2012:-181.351,-16.8577,0	1/1:57:1,56:1:36:56:2008:-177.377,-13.5604,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:113:0,113:0:0:113:4040:-363.786,-34.0164,0	1/1:77:0,77:0:0:77:2756:-248.282,-23.1793,0	1/1:50:0,50:0:0:50:1780:-160.483,-15.0515,0	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	1/1:69:1,68:1:32:68:2443:-216.915,-17.5718,0	0/1:87:50,37:50:1796:37:1328:-93.622,0,-135.647	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:83:1,82:1:36:82:2944:-261.595,-21.3872,0	1/1:45:1,44:1:36:44:1572:-138.173,-9.94808,0	1/1:116:0,116:0:0:116:4119:-370.89,-34.9195,0	1/1:58:0,58:0:0:58:2073:-186.839,-17.4597,0	0/1:31:13,18:13:468:18:633:-47.9631,0,-33.1277	0/1:49:19,30:19:680:30:1071:-81.9511,0,-46.7787	1/1:25:0,25:0:0:25:884:-79.8784,-7.52575,0	1/1:46:0,46:0:0:46:1656:-149.328,-13.8474,0	1/1:46:0,46:0:0:46:1652:-148.772,-13.8474,0	1/1:166:0,166:0:0:166:5938:-534.525,-49.971,0	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	0/1:48:22,26:22:788:26:936:-70.11,0,-56.7954	0/1:26:13,13:13:464:13:468:-34.6329,0,-34.2707	0/1:95:47,48:47:1688:48:1728:-127.194,0,-123.609	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:63:0,63:0:0:63:2260:-203.663,-18.9649,0	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	0/1:17:8,9:8:284:9:324:-24.3883,0,-20.7858	0/1:54:23,31:23:828:31:1112:-84.1356,0,-58.5885	0/1:26:15,11:15:540:11:396:-28.156,0,-41.1098	1/1:103:0,103:0:0:103:3688:-332.123,-31.0061,0	1/1:56:0,56:0:0:56:2012:-181.353,-16.8577,0
chr03	21269154	.	ACCC	ACCT,GCCT	415958	PASS	AB=0.497471,0.496371;ABP=3.26293,3.53036;AC=164,24;AF=0.87234,0.12766;AN=188;AO=12630,2288;CIGAR=3M1X,1X2M1X;DP=15001;DPB=15002.8;DPRA=0,1.34433;EPP=27420,4971.34;EPPR=44.2683;GTI=2;LEN=1,4;MEANALT=2.09574,3;MQM=59.986,59.9712;MQMR=60;NS=94;NUMALT=2;ODDS=3.51562;PAIRED=0,0;PAIREDR=0;PAO=3,4;PQA=106,142;PQR=0;PRO=2;QA=450485,79976;QR=664;RO=19;RPL=5600,985;RPP=354.589,98.9841;RPPR=3.12459;RPR=7030,1303;RUN=1,1;SAF=5601,985;SAP=353.607,98.9841;SAR=7029,1303;SRF=10;SRP=3.12459;SRR=9;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:92:0,43,49:0:0:43,49:1544,1702:-264.661,-138.706,-125.761,-126.309,0,-111.558	1/2:246:0,128,115:0:0:128,115:4579,4047:-702.866,-329.48,-290.948,-373.417,0,-338.798	1/2:409:1,198,208:1:35:198,208:7059,7240:-1161.02,-585.919,-529.163,-572.609,0,-512.842	1/1:239:0,237,0:0:0:237,0:8459,0:-760.982,-71.3441,0,-760.982,-71.3441,-760.982	1/1:95:0,95,0:0:0:95,0:3369,0:-303.427,-28.5979,0,-303.427,-28.5979,-303.427	1/1:53:0,53,0:0:0:53,0:1875,0:-169.026,-15.9546,0,-169.026,-15.9546,-169.026	1/1:181:1,179,0:1:36:179,0:6322,0:-565.511,-50.912,0,-565.812,-53.8844,-568.75	1/1:293:0,293,0:0:0:293,0:10467,0:-941.95,-88.2018,0,-941.95,-88.2018,-941.95	1/1:189:0,188,0:0:0:188,0:6728,0:-605.295,-56.5936,0,-605.295,-56.5936,-605.295	1/2:168:0,87,81:0:0:87,81:3109,2830:-484.05,-230.557,-204.367,-253.846,0,-229.462	1/1:166:1,162,1:1:36:162,1:5781,36:-516.85,-45.8145,0,-514.214,-45.8145,-516.85	1/1:185:0,184,1:0:0:184,1:6520,35:-586.535,-55.3895,0,-583.687,-52.1919,-583.386	1/2:149:1,92,56:1:36:92,56:3280,1938:-421.609,-154.536,-129.779,-264.426,0,-250.506	1/1:201:0,200,0:0:0:200,0:7138,0:-642.268,-60.206,0,-642.268,-60.206,-642.268	1/1:161:0,161,0:0:0:161,0:5723,0:-515.187,-48.4658,0,-515.187,-48.4658,-515.187	1/1:141:0,140,0:0:0:140,0:4990,0:-448.998,-42.1442,0,-448.998,-42.1442,-448.998	1/1:169:0,168,0:0:0:168,0:5988,0:-538.726,-50.573,0,-538.726,-50.573,-538.726	1/1:115:1,114,0:1:36:114,0:4046,0:-360.724,-31.0202,0,-361.025,-34.3174,-363.963	1/2:106:1,52,53:1:32:52,53:1833,1819:-294.08,-145.134,-132.058,-146.697,0,-133.32	1/1:260:0,259,0:0:0:259,0:9243,0:-831.48,-77.9668,0,-831.48,-77.9668,-831.48	1/1:234:0,232,0:0:0:232,0:8272,0:-744.187,-69.839,0,-744.187,-69.839,-744.187	1/1:76:0,75,0:0:0:75,0:2692,0:-242.31,-22.5773,0,-242.31,-22.5773,-242.31	1/1:114:4,110,0:4:143:110,0:3932,0:-340.849,-21.096,0,-342.053,-33.1133,-353.713	1/1:151:0,149,1:0:0:149,1:5287,35:-475.687,-44.8535,0,-472.839,-41.9358,-472.538	1/1:107:0,105,1:0:0:105,1:3750,36:-337.369,-31.6082,0,-334.432,-28.6408,-334.131	1/2:305:1,151,152:1:36:151,152:5365,5342:-868.779,-431.903,-389.385,-434.267,0,-391.448	1/1:450:0,450,0:0:0:450,0:16038,0:-1443.11,-135.464,0,-1443.11,-135.464,-1443.11	1/1:80:0,80,0:0:0:80,0:2822,0:-254.147,-24.0824,0,-254.147,-24.0824,-254.147	1/1:312:0,307,1:0:0:307,1:10976,36:-987.358,-92.4162,0,-984.421,-89.4658,-984.12	1/1:178:0,173,4:0:0:173,4:6160,142:-554.144,-52.0782,0,-542.574,-40.5119,-541.37	1/1:126:0,126,0:0:0:126,0:4466,0:-402.111,-37.9298,0,-402.111,-37.9298,-402.111	1/2:7:0,2,5:0:0:2,5:72,174:-20.3748,-14.4965,-13.8945,-6.23466,0,-4.72951	1/1:19:0,19,0:0:0:19,0:680,0:-61.5292,-5.71957,0,-61.5292,-5.71957,-61.5292	1/1:15:0,15,0:0:0:15,0:540,0:-48.9365,-4.51545,0,-48.9365,-4.51545,-48.9365	1/1:12:0,12,0:0:0:12,0:428,0:-38.8588,-3.61236,0,-38.8588,-3.61236,-38.8588	1/1:22:0,22,0:0:0:22,0:780,0:-70.523,-6.62266,0,-70.523,-6.62266,-70.523	1/1:404:1,402,0:1:36:402,0:14324,0:-1285.32,-118.077,0,-1285.62,-121.014,-1288.56	1/1:158:0,158,0:0:0:158,0:5653,0:-508.888,-47.5627,0,-508.888,-47.5627,-508.888	1/2:173:0,74,98:0:0:74,98:2643,3464:-497.6,-282.115,-259.839,-215.48,0,-185.979	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:426:0,201,222:0:0:201,222:7168,7748:-1214.54,-630.22,-569.713,-584.345,0,-517.516	1/2:67:0,39,28:0:0:39,28:1383,990:-193.659,-80.9852,-69.245,-113.028,0,-104.599	1/1:205:0,205,0:0:0:205,0:7328,0:-659.525,-61.7112,0,-659.525,-61.7112,-659.525	1/1:122:0,121,0:0:0:121,0:4340,0:-390.415,-36.4246,0,-390.415,-36.4246,-390.415	1/1:147:0,147,0:0:0:147,0:5169,0:-465.349,-44.2514,0,-465.349,-44.2514,-465.349	1/1:132:0,132,0:0:0:132,0:4732,0:-426.038,-39.736,0,-426.038,-39.736,-426.038	1/1:168:0,166,0:0:0:166,0:5948,0:-535.112,-49.971,0,-535.112,-49.971,-535.112	1/1:202:0,202,0:0:0:202,0:7222,0:-650.034,-60.8081,0,-650.034,-60.8081,-650.034	1/1:140:0,137,1:0:0:137,1:4905,36:-441.3,-41.2411,0,-438.363,-38.2737,-438.062	1/2:258:0,135,122:0:0:135,122:4812,4294:-741.798,-349.556,-308.917,-392.237,0,-355.511	1/1:169:0,169,0:0:0:169,0:6017,0:-541.634,-50.8741,0,-541.634,-50.8741,-541.634	1/1:15:0,15,0:0:0:15,0:527,0:-47.7602,-4.51545,0,-47.7602,-4.51545,-47.7602	1/2:213:0,114,98:0:0:114,98:4070,3424:-610.153,-278.338,-244.021,-331.63,0,-302.129	1/1:43:0,42,1:0:0:42,1:1495,36:-134.484,-12.6433,0,-131.547,-9.34602,-131.246	1/1:29:0,27,0:0:0:27,0:972,0:-87.5078,-8.12781,0,-87.5078,-8.12781,-87.5078	1/2:186:0,95,90:0:0:95,90:3380,3122:-529.284,-253.816,-225.219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chr03	21557332	.	TGAAA	CAAAA	113786	PASS	AB=0.515755;ABP=6.91031;AC=163;AF=0.867021;AN=188;AO=5273;CIGAR=2X3M;DP=6175;DPB=6175.4;DPRA=0;EPP=11453.2;EPPR=1898.71;GTI=2;LEN=2;MEANALT=1.24468;MQM=59.5524;MQMR=60;NS=94;NUMALT=1;ODDS=2.80884;PAIRED=0;PAIREDR=0;PAO=1;PQA=36;PQR=36;PRO=1;QA=185778;QR=30952;RO=873;RPL=0;RPP=11453.2;RPPR=1898.71;RPR=5273;RUN=1;SAF=5273;SAP=11453.2;SAR=0;SRF=873;SRP=1898.71;SRR=0;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:11,13:11:393:13:453:-33.8755,0,-28.4862	0/1:72:36,36:36:1285:36:1281:-93.91,0,-94.2795	0/1:113:57,56:57:1999:56:1969:-143.45,0,-146.168	1/1:94:0,94:0:0:94:3321:-299.099,-28.2968,0	1/1:24:0,24:0:0:24:845:-76.3673,-7.22472,0	1/1:25:0,25:0:0:25:885:-79.9665,-7.52575,0	1/1:40:0,40:0:0:40:1401:-126.366,-12.0412,0	1/1:118:0,117:0:0:117:4115:-370.265,-35.2205,0	1/1:36:0,36:0:0:36:1238:-111.688,-10.8371,0	0/1:72:43,29:43:1505:29:1038:-72.0603,0,-114.068	1/1:72:0,71:0:0:71:2517:-226.124,-21.3731,0	1/1:90:0,90:0:0:90:3198:-287.879,-27.0927,0	0/1:38:16,22:16:564:22:790:-59.9676,0,-39.6511	1/1:84:0,84:0:0:84:2970:-267.519,-25.2865,0	1/1:32:0,32:0:0:32:1135:-102.449,-9.63296,0	0/1:63:6,57:6:207:57:1987:-160.125,0,-0.00281594	1/1:29:0,28:0:0:28:991:-89.1837,-8.42884,0	1/1:28:0,28:0:0:28:975:-88.0598,-8.42884,0	0/1:38:15,23:15:539:23:811:-61.7721,0,-37.4071	1/1:99:0,98:0:0:98:3465:-311.712,-29.5009,0	1/1:88:0,88:0:0:88:3103:-279.424,-26.4906,0	1/1:52:0,52:0:0:52:1837:-165.599,-15.6536,0	1/1:50:0,50:0:0:50:1772:-159.757,-15.0515,0	1/1:24:0,24:0:0:24:858:-77.5392,-7.22472,0	1/1:81:0,80:0:0:80:2791:-251.154,-24.0824,0	0/1:158:86,71:86:3066:71:2477:-175.512,0,-228.549	1/1:137:0,137:0:0:137:4834:-435.039,-41.2411,0	1/1:28:0,28:0:0:28:996:-89.9432,-8.42884,0	1/1:111:0,111:0:0:111:3922:-353.132,-33.4143,0	1/1:70:0,70:0:0:70:2470:-222.539,-21.0721,0	1/1:84:0,84:0:0:84:2956:-266.191,-25.2865,0	0/1:21:3,18:3:107:18:633:-50.9745,0,-3.66054	1/1:13:1,12:1:36:12:432:-35.6229,-0.315115,0	1/1:10:0,10:0:0:10:349:-31.7447,-3.0103,0	1/1:18:0,18:0:0:18:633:-57.2419,-5.41854,0	1/1:33:0,33:0:0:33:1160:-104.631,-9.93399,0	1/1:131:0,130:0:0:130:4521:-406.682,-39.1339,0	1/1:113:0,112:0:0:112:3918:-352.285,-33.7154,0	0/1:64:33,30:33:1159:30:1054:-75.8057,0,-85.2908	1/1:6:0,6:0:0:6:205:-18.7836,-1.80618,0	0/1:52:20,31:20:698:31:1106:-84.2164,0,-47.5062	0/1:31:16,15:16:573:15:535:-39.1514,0,-42.5721	1/1:138:0,137:0:0:137:4866:-437.747,-41.2411,0	1/1:45:0,45:0:0:45:1598:-144.102,-13.5464,0	1/1:34:0,34:0:0:34:1189:-107.084,-10.235,0	1/1:86:0,86:0:0:86:3022:-272.205,-25.8886,0	1/1:81:0,81:0:0:81:2884:-259.75,-24.3834,0	1/1:110:0,110:0:0:110:3859:-347.504,-33.1133,0	1/1:68:1,67:1:36:67:2369:-209.861,-16.8718,0	0/1:121:56,65:56:1975:65:2285:-169.476,0,-141.6	1/1:59:0,58:0:0:58:2029:-182.491,-17.4597,0	1/1:21:0,21:0:0:21:744:-67.1929,-6.32163,0	0/1:84:40,44:40:1432:44:1545:-113.856,0,-103.891	1/1:68:0,68:0:0:68:2418:-217.874,-20.47,0	1/1:13:0,13:0:0:13:462:-41.9168,-3.91339,0	0/1:99:36,63:36:1267:63:2213:-169.47,0,-84.5306	0/1:19:11,8:11:390:8:282:-19.9974,0,-29.7193	1/1:30:0,30:0:0:30:1061:-95.8006,-9.0309,0	1/1:32:0,32:0:0:32:1124:-101.465,-9.63296,0	1/1:95:0,95:0:0:95:3348:-301.506,-28.5979,0	1/1:87:0,86:0:0:86:3057:-274.992,-25.8886,0	1/1:8:0,8:0:0:8:286:-26.0855,-2.40824,0	1/1:70:0,70:0:0:70:2473:-222.745,-21.0721,0	1/1:129:1,128:1:35:128:4482:-399.943,-35.3342,0	1/1:47:0,47:0:0:47:1644:-148.235,-14.1484,0	1/1:59:0,59:0:0:59:2048:-184.358,-17.7608,0	1/1:110:0,109:0:0:109:3818:-343.546,-32.8123,0	0/1:125:82,43:82:2905:43:1542:-101.431,0,-224.059	1/1:58:0,56:0:0:56:1937:-174.223,-16.8577,0	1/1:35:0,35:0:0:35:1222:-110.281,-10.5361,0	1/1:36:0,36:0:0:36:1251:-112.878,-10.8371,0	1/1:29:0,29:0:0:29:1030:-92.9541,-8.72987,0	1/1:61:0,55:0:0:55:1927:-173.313,-16.5567,0	1/1:71:0,71:0:0:71:2473:-222.731,-21.3731,0	1/1:210:0,210:0:0:210:7391:-665.117,-63.2163,0	1/1:105:0,104:0:0:104:3643:-327.607,-31.3071,0	0/1:93:45,48:45:1586:48:1704:-125.64,0,-115.034	0/1:71:27,43:27:963:43:1520:-115.735,0,-65.6324	1/1:18:0,18:0:0:18:629:-56.9349,-5.41854,0	1/1:40:0,40:0:0:40:1425:-128.547,-12.0412,0	1/1:56:0,56:0:0:56:1959:-176.525,-16.8577,0	1/1:125:0,124:0:0:124:4381:-394.156,-37.3277,0	1/1:38:0,37:0:0:37:1328:-119.44,-11.1381,0	0/1:54:25,29:25:893:29:1040:-77.659,0,-64.4343	0/1:30:15,14:15:535:14:489:-35.2481,0,-39.3951	0/1:92:48,43:48:1702:43:1514:-108.795,0,-125.712	1/1:16:0,16:0:0:16:561:-50.8143,-4.81648,0	1/1:47:0,47:0:0:47:1655:-149.13,-14.1484,0	1/1:68:1,67:1:36:67:2384:-211.189,-16.8718,0	0/1:62:30,32:30:1077:32:1152:-85.3181,0,-78.5794	0/1:167:80,86:80:2850:86:3032:-222.248,0,-206.35	0/1:46:32,14:32:1139:14:493:-30.8497,0,-88.9721	1/1:61:0,61:0:0:61:2123:-191.324,-18.3628,0	1/1:82:0,82:0:0:82:2920:-263.021,-24.6845,0
chr03	21557370	.	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chr03	21961324	.	A	G	24843	PASS	AB=0.5;ABP=3.0103;AC=25;AF=0.132979;AN=188;AO=1476;CIGAR=1X;DP=10862;DPB=10862;DPRA=1.03091;EPP=3190.76;EPPR=20225.9;GTI=0;LEN=1;MEANALT=1.41379;MQM=59.9844;MQMR=33.8803;NS=94;NUMALT=1;ODDS=7.45796;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=52695;QR=333491;RO=9313;RPL=2;RPP=3190.76;RPPR=20225.9;RPR=1474;RUN=1;SAF=1476;SAP=3208.1;SAR=0;SRF=9313;SRP=20225.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:72:41,31:41:1472:31:1112:-78.7172,0,-92.4864	0/1:87:44,43:44:1568:43:1530:-111.802,0,-96.0814	0/1:165:117,48:117:4181:48:1720:-105.416,0,-274.258	0/0:251:245,1:245:8769:1:36:0,-70.802,-694.189	0/0:94:94,0:94:3368:0:0:0,-28.2968,-263.04	0/0:35:35,0:35:1256:0:0:0,-10.536,-98.2563	0/0:87:87,0:87:3116:0:0:0,-26.1896,-249.225	0/0:379:379,0:379:13444:0:0:0,-114.09,-1055.84	0/0:126:123,0:123:4416:0:0:0,-37.0267,-344.396	0/1:80:46,34:46:1648:34:1216:-85.6642,0,-106.772	0/0:97:96,0:96:3429:0:0:0,-28.8989,-274.303	0/0:154:153,0:153:5496:0:0:0,-46.0576,-426.713	0/1:96:43,48:43:1544:48:1724:-127.754,0,-92.4725	0/0:62:62,0:62:2224:0:0:0,-18.6639,-173.356	0/0:113:110,0:110:3948:0:0:0,-33.1133,-315.772	0/0:101:99,0:99:3530:0:0:0,-29.802,-275.079	0/0:42:42,0:42:1508:0:0:0,-12.6433,-118.32	0/0:51:48,0:48:1708:0:0:0,-14.4494,-132.306	0/1:64:31,32:31:1116:32:1152:-84.749,0,-67.2855	0/0:138:138,0:138:4956:0:0:0,-41.5421,-396.606	0/0:147:147,0:147:5276:0:0:0,-44.2514,-411.855	0/0:131:130,0:130:4645:0:0:0,-39.1339,-354.416	0/0:141:140,0:140:4990:0:0:0,-42.1442,-401.617	0/0:60:60,0:60:2156:0:0:0,-18.0618,-169.406	0/0:87:87,0:87:3124:0:0:0,-26.1896,-241.087	0/1:303:165,138:165:5901:138:4920:-351.738,0,-361.082	0/0:307:307,0:307:10986:0:0:0,-92.4162,-857.652	0/0:43:43,0:43:1533:0:0:0,-12.9443,-117.706	0/0:278:275,0:275:9849:0:0:0,-82.7832,-746.716	0/0:139:135,4:135:4848:4:144:0,-28.5296,-367.21	0/0:70:70,0:70:2516:0:0:0,-21.0721,-197.879	0/1:27:21,6:21:752:6:216:-11.6627,0,-51.0608	0/1:42:24,18:24:864:18:648:-46.0086,0,-55.6633	0/0:24:24,0:24:864:0:0:0,-7.22472,-67.7829	0/0:16:15,1:15:536:1:36:0,-1.2182,-38.9518	0/0:59:59,0:59:2116:0:0:0,-17.7608,-164.943	0/0:262:258,0:258:9268:0:0:0,-77.6657,-704.185	0/0:111:111,0:111:3977:0:0:0,-33.4143,-309.736	0/1:106:49,57:49:1764:57:2040:-151.963,0,-103.58	0/0:24:24,0:24:856:0:0:0,-7.22472,-67.1332	0/1:90:42,48:42:1504:48:1716:-127.633,0,-89.5296	0/1:46:15,31:15:540:31:1104:-85.8233,0,-27.8682	0/0:228:227,0:227:8129:0:0:0,-68.3338,-630.869	0/0:78:77,1:77:2772:1:36:0,-19.8821,-216.389	0/0:78:77,0:77:2756:0:0:0,-23.1793,-220.243	0/0:149:145,0:145:5189:0:0:0,-43.6493,-392.043	0/0:137:137,0:137:4912:0:0:0,-41.2411,-382.077	0/0:238:237,0:237:8447:0:0:0,-71.3441,-675.682	0/0:90:90,0:90:3228:0:0:0,-27.0927,-259.848	0/1:178:78,99:78:2796:99:3527:-264.075,0,-169.641	0/0:65:65,0:65:2336:0:0:0,-19.5669,-179.661	0/0:26:26,0:26:936:0:0:0,-7.82678,-76.0227	0/1:191:111,79:111:3977:79:2829:-197.376,0,-251.998	0/0:45:45,0:45:1620:0:0:0,-13.5463,-123.174	0/0:31:31,0:31:1112:0:0:0,-9.33193,-88.4587	0/1:184:117,67:117:4204:67:2393:-160.238,0,-270.569	0/1:103:56,47:56:2012:47:1670:-119.58,0,-130.529	0/0:29:29,0:29:1040:0:0:0,-8.72987,-80.8709	0/0:13:13,0:13:468:0:0:0,-3.91339,-35.3734	0/0:92:92,0:92:3304:0:0:0,-27.6948,-258.906	0/0:145:145,0:145:5185:0:0:0,-43.6493,-411.335	0/0:8:8,0:8:288:0:0:0,-2.40824,-22.7278	0/0:202:202,0:202:7233:0:0:0,-60.8081,-550.633	0/0:145:144,0:144:5145:0:0:0,-43.3483,-410.144	0/0:59:59,0:59:2101:0:0:0,-17.7608,-162.674	0/0:125:123,0:123:4428:0:0:0,-37.0267,-353.47	0/0:186:186,0:186:6680:0:0:0,-55.9916,-535.128	0/1:180:58,119:58:2084:119:4244:-328.542,0,-112.942	0/0:60:58,0:58:2076:0:0:0,-17.4597,-162.943	0/0:85:85,0:85:3044:0:0:0,-25.5875,-234.764	0/0:70:69,0:69:2461:0:0:0,-20.7711,-185.568	0/0:18:18,0:18:648:0:0:0,-5.41854,-51.261	0/0:185:185,0:185:6612:0:0:0,-55.6905,-518.944	0/0:104:103,0:103:3700:0:0:0,-31.0061,-288.514	0/0:143:141,0:141:5049:0:0:0,-42.4452,-392.778	0/0:260:259,0:259:9288:0:0:0,-77.9668,-738.102	0/1:99:41,58:41:1472:58:2043:-154.334,0,-84.9453	0/1:102:51,50:51:1813:50:1764:-128.362,0,-111.823	0/0:22:22,0:22:792:0:0:0,-6.62266,-61.2223	0/0:167:167,0:167:5969:0:0:0,-50.272,-466.43	0/0:153:150,0:150:5345:0:0:0,-45.1545,-417.337	0/0:239:239,0:239:8564:0:0:0,-71.9462,-687.517	0/0:74:74,0:74:2656:0:0:0,-22.2762,-213.193	0/1:107:46,60:46:1652:60:2135:-160.225,0,-99.0335	0/1:81:36,44:36:1276:44:1584:-118.485,0,-79.204	0/1:179:78,100:78:2804:100:3572:-267.822,0,-171.241	0/0:20:19,0:19:672:0:0:0,-5.71957,-53.3955	0/0:106:103,0:103:3700:0:0:0,-31.0061,-288.311	0/0:117:117,0:117:4185:0:0:0,-35.2205,-327.837	0/1:81:35,45:35:1256:45:1604:-120.292,0,-73.2981	0/1:138:75,63:75:2688:63:2248:-161.039,0,-166.654	0/1:137:33,104:33:1180:104:3732:-294.839,0,-51.6803	0/0:141:140,0:140:5020:0:0:0,-42.1442,-406.208	0/0:162:157,0:157:5625:0:0:0,-47.2617,-451.846
chr03	21961334	.	TCCACAA	TCACAA	152154	PASS	AB=0.482546;ABP=10.742;AC=163;AF=0.867021;AN=188;AO=9008;CIGAR=1M1D5M;DP=10568;DPB=9274.71;DPRA=0;EPP=19554.9;EPPR=2110.56;GTI=0;LEN=1;MEANALT=1.44681;MQM=33.8168;MQMR=59.9835;NS=94;NUMALT=1;ODDS=2.66364;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=295169;QR=53249;RO=1511;RPL=0;RPP=19563.6;RPPR=2110.56;RPR=9008;RUN=1;SAF=9007;SAP=19554.9;SAR=1;SRF=1511;SRP=3284.11;SRR=0;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:75:32,43:32:1120:43:1372:-90.1136,0,-78.5297	0/1:87:44,43:44:1524:43:1404:-88.9077,0,-111.262	0/1:164:48,116:48:1707:116:3764:-259.444,0,-104.546	1/1:248:1,245:1:36:245:8163:-669.21,-70.7733,0	1/1:90:0,90:0:0:90:2938:-240.683,-27.0927,0	1/1:32:0,32:0:0:32:1051:-86.3071,-9.63296,0	1/1:84:0,84:0:0:84:2797:-231.826,-25.2865,0	1/1:364:0,363:0:0:363:11858:-974.525,-109.274,0	1/1:123:0,123:0:0:123:3973:-325.824,-37.0267,0	0/1:81:36,45:36:1283:45:1500:-99.1647,0,-91.3906	1/1:93:0,93:0:0:93:3130:-257.929,-27.9958,0	1/1:154:0,152:0:0:152:4926:-404.243,-45.7566,0	0/1:96:49,47:49:1735:47:1512:-95.5359,0,-127.536	1/1:62:0,62:0:0:62:2025:-166.068,-18.6639,0	1/1:111:0,111:0:0:111:3725:-307.083,-33.4143,0	1/1:99:0,99:0:0:99:3227:-264.582,-29.802,0	1/1:41:0,41:0:0:41:1345:-110.557,-12.3422,0	1/1:49:0,49:0:0:49:1560:-127.857,-14.7505,0	0/1:61:32,28:32:1141:28:916:-57.1772,0,-84.7527	1/1:138:0,138:0:0:138:4635:-382.44,-41.5421,0	1/1:139:0,139:0:0:139:4563:-374.003,-41.8432,0	1/1:122:0,121:0:0:121:3836:-313.223,-36.4246,0	1/1:137:0,137:0:0:137:4609:-381.799,-41.2411,0	1/1:58:0,58:0:0:58:1903:-156.842,-17.4597,0	1/1:86:0,85:0:0:85:2762:-226.533,-25.5876,0	0/1:294:140,153:140:4921:153:4881:-310.205,0,-354.489	1/1:297:0,297:0:0:297:9697:-795.567,-89.4059,0	1/1:41:0,41:0:0:41:1313:-107.986,-12.3422,0	1/1:266:0,264:0:0:264:8339:-681.036,-79.4719,0	1/1:134:4,130:4:143:130:4230:-334.534,-27.1166,0	1/1:65:0,64:0:0:64:2146:-176.59,-19.2659,0	0/1:26:6,20:6:215:20:651:-45.9544,0,-11.8724	0/1:42:18,24:18:630:24:778:-52.2742,0,-44.3819	1/1:23:0,23:0:0:23:746:-61.4961,-6.92369,0	1/1:14:1,13:1:36:13:427:-31.9246,-0.616145,0	1/1:55:0,55:0:0:55:1787:-146.875,-16.5567,0	1/1:254:0,253:0:0:253:8016:-655.144,-76.1606,0	1/1:103:0,102:0:0:102:3329:-272.875,-30.7051,0	0/1:104:56,48:56:1964:48:1560:-96.5179,0,-145.726	1/1:22:0,22:0:0:22:710:-58.5681,-6.62266,0	0/1:88:48,40:48:1701:40:1282:-78.9953,0,-126.886	0/1:46:32,14:32:1135:14:451:-23.2867,0,-88.612	1/1:218:0,217:0:0:217:7004:-574.859,-65.3235,0	1/1:77:1,75:1:36:75:2499:-202.787,-19.5648,0	1/1:76:0,76:0:0:76:2553:-210.633,-22.8783,0	1/1:145:0,144:0:0:144:4505:-367.39,-43.3483,0	1/1:130:0,129:0:0:129:4210:-345.791,-38.8329,0	1/1:227:0,226:0:0:226:7557:-626.239,-68.0328,0	1/1:85:0,85:0:0:85:2853:-235.274,-25.5876,0	0/1:181:103,77:103:3657:77:2591:-159.696,0,-274.961	1/1:61:0,61:0:0:61:1946:-159.451,-18.3628,0	1/1:26:0,26:0:0:26:888:-74.0808,-7.82678,0	0/1:192:80,111:80:2839:111:3591:-237.818,0,-198.07	1/1:44:0,44:0:0:44:1400:-114.454,-13.2453,0	1/1:27:0,27:0:0:27:884:-73.1699,-8.12781,0	0/1:180:72,108:72:2517:108:3507:-233.166,0,-172.596	0/1:103:49,54:49:1733:54:1822:-119.406,0,-125.25	1/1:28:0,28:0:0:28:900:-74.2504,-8.42884,0	1/1:12:0,12:0:0:12:363:-29.9373,-3.61236,0	1/1:90:0,90:0:0:90:2930:-241.105,-27.0927,0	1/1:137:0,136:0:0:136:4534:-373.91,-40.9401,0	1/1:8:0,7:0:0:7:238:-19.9874,-2.10721,0	1/1:197:0,197:0:0:197:6234:-509.029,-59.3029,0	1/1:136:0,135:0:0:135:4518:-372.946,-40.6391,0	1/1:54:0,53:0:0:53:1725:-141.139,-15.9546,0	1/1:121:0,120:0:0:120:4035:-332.672,-36.1236,0	1/1:181:0,179:0:0:179:6032:-499.53,-53.8844,0	0/1:179:120,58:120:4218:58:1937:-105.714,0,-325.861	1/1:59:0,59:0:0:59:1924:-158.185,-17.7608,0	1/1:85:0,79:0:0:79:2598:-213.6,-23.7814,0	1/1:61:0,61:0:0:61:1914:-156.299,-18.3628,0	1/1:17:0,17:0:0:17:563:-46.7188,-5.11751,0	1/1:181:0,181:0:0:181:5914:-485.531,-54.4864,0	1/1:99:0,99:0:0:99:3228:-265.09,-29.802,0	1/1:140:0,140:0:0:140:4559:-374.158,-42.1442,0	1/1:251:0,248:0:0:248:8322:-686.906,-74.6554,0	0/1:99:59,39:59:2048:39:1264:-73.9454,0,-154.717	0/1:102:51,51:51:1796:51:1674:-106.654,0,-131.217	1/1:22:0,21:0:0:21:687:-56.3397,-6.32163,0	1/1:162:0,161:0:0:161:5230:-429.395,-48.4658,0	1/1:153:0,153:0:0:153:4944:-406.631,-46.0576,0	1/1:237:0,237:0:0:237:7984:-661.466,-71.3441,0	1/1:70:0,69:0:0:69:2320:-192.159,-20.7711,0	0/1:107:62,44:62:2199:44:1479:-90.2586,0,-166.074	0/1:81:44,37:44:1566:37:1229:-77.9499,0,-116.849	0/1:180:105,75:105:3710:75:2532:-155.431,0,-279.921	1/1:19:0,19:0:0:19:612:-50.2698,-5.71957,0	1/1:103:0,101:0:0:101:3315:-273.684,-30.404,0	1/1:113:0,113:0:0:113:3700:-304.267,-34.0164,0	0/1:81:47,34:47:1662:34:1102:-66.0113,0,-125.484	0/1:136:66,69:66:2303:69:2265:-145.762,0,-166.709	0/1:137:105,32:105:3674:32:1050:-45.332,0,-289.631	1/1:134:0,131:0:0:131:4415:-371.447,-39.4349,0	1/1:156:0,156:0:0:156:5252:-434.202,-46.9607,0
chr03	22478688	.	G	A	39508.7	PASS	AB=0.501438;ABP=3.07273;AC=28;AF=0.148936;AN=188;AO=1760;CIGAR=1X;DP=12739;DPB=12739;DPRA=1.16319;EPP=3824.8;EPPR=23837.1;GTI=1;LEN=1;MEANALT=1.02564;MQM=59.9909;MQMR=59.9876;NS=94;NUMALT=1;ODDS=0.817228;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62529;QR=388773;RO=10976;RPL=959;RPP=33.8107;RPPR=565.384;RPR=801;RUN=1;SAF=959;SAP=33.8107;SAR=801;SRF=6331;SRP=565.384;SRR=4645;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:76:34,42:34:1208:42:1486:-111.155,0,-86.1478	0/1:123:74,49:74:2639:49:1729:-118.866,0,-200.73	0/1:137:78,59:78:2785:59:2108:-148.748,0,-209.648	0/0:306:306,0:306:10801:0:0:0,-92.1152,-971.993	0/0:119:119,0:119:4227:0:0:0,-35.8226,-380.61	0/0:65:65,0:65:2307:0:0:0,-19.5669,-207.891	0/0:99:99,0:99:3503:0:0:0,-29.802,-315.481	0/0:247:247,0:247:8740:0:0:0,-74.3544,-786.545	0/0:242:242,0:242:8627:0:0:0,-72.8493,-776.411	0/1:119:57,62:57:2043:62:2216:-163.882,0,-148.319	0/0:84:84,0:84:2994:0:0:0,-25.2865,-269.691	0/0:195:195,0:195:6898:0:0:0,-58.7008,-620.825	0/1:131:59,72:59:2069:72:2568:-191.935,0,-147.045	0/0:129:128,1:128:4516:1:36:0,-35.2346,-403.012	0/0:114:114,0:114:3964:0:0:0,-34.3174,-356.955	0/0:91:91,0:91:3187:0:0:0,-27.3937,-287.053	0/0:66:66,0:66:2351:0:0:0,-19.868,-211.849	0/0:65:65,0:65:2254:0:0:0,-19.5669,-203.121	0/1:60:20,40:20:703:40:1406:-108.773,0,-45.5317	0/0:207:207,0:207:7376:0:0:0,-62.3132,-663.89	0/0:289:289,0:289:10272:0:0:0,-86.9977,-924.414	0/0:119:119,0:119:4238:0:0:0,-35.8226,-381.598	0/0:227:227,0:227:8039:0:0:0,-68.3338,-723.536	0/0:71:71,0:71:2504:0:0:0,-21.3731,-225.612	0/0:132:132,0:132:4704:0:0:0,-39.736,-423.522	0/1:421:209,212:209:7419:212:7528:-550.83,0,-541.025	0/0:292:292,0:292:10328:0:0:0,-87.9008,-929.452	0/0:62:61,0:61:2152:0:0:0,-18.3628,-193.714	0/0:318:316,2:316:11222:2:72:0,-88.8908,-1003.04	0/0:141:138,3:138:4924:3:95:0,-33.581,-434.446	0/0:185:185,0:185:6576:0:0:0,-55.6905,-591.925	0/1:9:7,2:7:252:2:68:-3.74844,0,-20.3197	0/1:21:9,12:9:302:12:428:-32.5372,0,-21.1835	0/0:21:21,0:21:743:0:0:0,-6.32163,-67.1933	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:25:25,0:25:870:0:0:0,-7.52575,-78.6146	0/0:369:369,0:369:13013:0:0:0,-111.08,-1171	0/0:159:159,0:159:5572:0:0:0,-47.8638,-501.608	0/1:95:44,51:44:1513:51:1823:-135.753,0,-107.859	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:167:101,66:101:3605:66:2357:-162.115,0,-274.383	0/1:61:34,27:34:1198:27:960:-68.3534,0,-89.7612	0/0:251:250,1:250:8899:1:36:0,-71.9603,-797.299	0/0:120:120,0:120:4267:0:0:0,-36.1236,-384.209	0/0:88:88,0:88:3072:0:0:0,-26.4906,-276.709	0/0:133:133,0:133:4726:0:0:0,-40.037,-425.502	0/0:136:135,1:135:4797:1:36:0,-37.3418,-428.287	0/0:256:255,0:255:9038:0:0:0,-76.7626,-813.044	0/0:86:86,0:86:3031:0:0:0,-25.8886,-273.02	0/1:156:74,82:74:2622:82:2923:-216.344,0,-189.267	0/0:124:124,0:124:4410:0:0:0,-37.3277,-397.074	0/0:16:16,0:16:557:0:0:0,-4.81648,-50.4556	0/1:74:24,50:24:864:50:1754:-135.864,0,-55.8063	0/0:131:131,0:131:4665:0:0:0,-39.4349,-420.012	0/1:17:11,6:11:396:6:216:-14.673,0,-30.8652	0/1:219:124,95:124:4425:95:3376:-238.13,0,-332.496	0/1:41:13,28:13:468:28:1004:-78.3336,0,-30.1174	0/0:20:20,0:20:707:0:0:0,-6.0206,-63.9546	0/1:22:15,7:15:540:7:252:-16.4063,0,-42.3139	0/0:129:129,0:129:4599:0:0:0,-38.8329,-414.076	0/0:133:131,2:131:4631:2:72:0,-33.2003,-410.12	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:225:224,1:224:7958:1:36:0,-64.1335,-712.647	0/0:309:307,2:307:10928:2:72:0,-86.1815,-976.586	0/0:103:103,0:103:3622:0:0:0,-31.0061,-326.187	0/0:119:119,0:119:4230:0:0:0,-35.8226,-380.882	0/0:259:258,1:258:9150:1:36:0,-74.3685,-819.831	0/1:180:55,125:55:1936:125:4451:-346.576,0,-119.551	0/0:106:106,0:106:3713:0:0:0,-31.9092,-334.374	0/0:84:84,0:84:2958:0:0:0,-25.2865,-266.453	0/0:78:78,0:78:2769:0:0:0,-23.4803,-249.451	0/0:50:50,0:50:1772:0:0:0,-15.0515,-159.76	0/1:137:82,55:82:2882:55:1964:-135.794,0,-218.375	0/0:126:126,0:126:4481:0:0:0,-37.9298,-403.46	0/0:248:247,1:247:8752:1:36:0,-71.0572,-784.077	0/0:131:130,1:130:4551:1:36:0,-35.8367,-406.161	0/1:160:89,70:89:3173:70:2471:-174.417,0,-237.57	0/1:166:87,79:87:3087:79:2828:-204.788,0,-228.088	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/0:132:132,0:132:4706:0:0:0,-39.736,-423.701	0/0:164:164,0:164:5853:0:0:0,-49.3689,-526.882	0/0:306:306,0:306:10870:0:0:0,-92.1152,-978.207	0/0:92:92,0:92:3236:0:0:0,-27.6948,-291.464	0/1:125:60,65:60:2123:65:2305:-170.081,0,-153.71	0/1:124:66,58:66:2300:58:2044:-146.903,0,-169.933	0/1:265:136,129:136:4783:129:4567:-331.425,0,-350.856	0/0:40:40,0:40:1419:0:0:0,-12.0412,-128.007	0/0:146:146,0:146:5145:0:0:0,-43.9504,-463.197	0/0:140:140,0:140:4913:0:0:0,-42.1442,-442.323	0/1:78:41,37:41:1430:37:1309:-94.6292,0,-105.514	0/1:151:81,70:81:2871:70:2483:-178.264,0,-213.17	0/1:143:49,94:49:1747:94:3342:-257.95,0,-114.466	0/0:77:77,0:77:2709:0:0:0,-23.1793,-244.052	0/0:202:202,0:202:7142:0:0:0,-60.8081,-642.843
chr03	22708840	.	T	C	248985	PASS	AB=0.518701;ABP=14.7058;AC=157;AF=0.835106;AN=188;AO=11203;CIGAR=1X;DP=13076;DPB=13076;DPRA=0;EPP=24035.6;EPPR=4011.66;GTI=1;LEN=1;MEANALT=1.07447;MQM=59.982;MQMR=59.9727;NS=94;NUMALT=1;ODDS=4.2223;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=400706;QR=66875;RO=1866;RPL=34;RPP=24035.6;RPPR=4011.66;RPR=11169;RUN=1;SAF=11203;SAP=24330;SAR=0;SRF=1866;SRP=4054.98;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:11,25:11:396:25:888:-69.4019,0,-25.1457	1/1:281:1,280:1:36:280:10037:-899.663,-80.9912,0	0/1:140:74,66:74:2664:66:2356:-170.155,0,-197.861	1/1:319:0,319:0:0:319:11403:-1026.15,-96.0286,0	1/1:79:0,79:0:0:79:2832:-255.118,-23.7814,0	1/1:88:0,88:0:0:88:3133:-282.196,-26.4906,0	1/1:200:0,200:0:0:200:7146:-643.198,-60.206,0	1/1:169:0,169:0:0:169:6055:-545.052,-50.8741,0	1/1:102:1,101:1:36:101:3615:-321.956,-27.1068,0	0/1:181:82,98:82:2933:98:3520:-262.602,0,-209.796	1/1:93:0,93:0:0:93:3331:-300.007,-27.9958,0	1/1:91:0,91:0:0:91:3268:-294.34,-27.3937,0	0/1:79:37,42:37:1332:42:1489:-110.521,0,-96.4001	1/1:120:0,120:0:0:120:4301:-387.265,-36.1236,0	1/1:88:0,88:0:0:88:3160:-284.624,-26.4906,0	1/1:74:0,74:0:0:74:2656:-239.286,-22.2762,0	0/1:115:62,53:62:2224:53:1897:-136.389,0,-165.806	1/1:63:0,63:0:0:63:2232:-201.142,-18.9649,0	0/1:50:22,28:22:792:28:1008:-75.9849,0,-56.5542	1/1:333:1,332:1:36:332:11859:-1063.5,-96.6447,0	1/1:233:1,232:1:36:232:8302:-743.589,-66.5417,0	1/1:148:0,148:0:0:148:5245:-472.187,-44.5524,0	1/1:51:0,51:0:0:51:1832:-165.161,-15.3525,0	1/1:141:0,141:0:0:141:5051:-454.734,-42.4452,0	1/1:153:0,153:0:0:153:5454:-490.988,-46.0576,0	0/1:448:193,255:193:6898:255:9102:-684.292,0,-486.024	1/1:237:0,237:0:0:237:8471:-762.39,-71.3441,0	0/1:41:22,18:22:788:18:648:-46.2509,0,-58.8438	1/1:397:0,397:0:0:397:14235:-1280.9,-119.509,0	1/1:238:2,236:2:72:236:8438:-752.583,-64.8084,0	1/1:185:0,185:0:0:185:6613:-595.249,-55.6906,0	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/1:12:3,9:3:108:9:324:-25.8935,0,-6.46281	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:275:0,274:0:0:274:9844:-885.698,-82.4822,0	1/1:262:0,262:0:0:262:9379:-844.073,-78.8699,0	0/1:91:53,38:53:1908:38:1364:-95.667,0,-144.604	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:295:131,164:131:4685:164:5845:-437.357,0,-333.005	0/1:28:11,17:11:396:17:612:-46.9846,0,-27.5539	0/1:180:68,112:68:2436:112:4004:-306.365,0,-164.373	0/1:80:42,38:42:1500:38:1368:-99.3384,0,-111.212	1/1:88:0,88:0:0:88:3139:-282.736,-26.4906,0	1/1:93:0,93:0:0:93:3329:-299.827,-27.9958,0	1/1:206:1,205:1:36:205:7343:-657.319,-58.4139,0	1/1:245:0,244:0:0:244:8709:-783.443,-73.4513,0	1/1:169:0,169:0:0:169:6052:-544.539,-50.8741,0	0/1:267:129,137:129:4632:137:4908:-361.586,0,-336.756	1/1:231:0,231:0:0:231:8274:-744.611,-69.5379,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:229:100,129:100:3584:129:4624:-347.387,0,-253.831	1/1:69:0,69:0:0:69:2472:-222.734,-20.7711,0	0/1:16:5,11:5:180:11:392:-30.8036,0,-11.7356	0/1:194:103,91:103:3685:91:3219:-231.533,0,-273.451	0/1:31:13,18:13:468:18:644:-48.9587,0,-33.1277	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:39:21,18:21:752:18:640:-46.1891,0,-56.2661	1/1:131:1,130:1:36:130:4649:-414.973,-35.8367,0	1/1:163:0,163:0:0:163:5850:-526.608,-49.0679,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:443:0,443:0:0:443:15826:-1423.66,-133.356,0	1/1:335:0,335:0:0:335:11978:-1077.87,-100.845,0	1/1:170:1,168:1:36:168:5991:-535.771,-47.5607,0	1/1:116:0,116:0:0:116:4103:-369.454,-34.9195,0	1/1:155:4,151:4:129:151:5414:-475.457,-34.732,0	0/1:142:87,55:87:3105:55:1948:-132.847,0,-236.93	1/1:54:0,54:0:0:54:1935:-174.426,-16.2556,0	1/1:111:1,110:1:36:110:3947:-351.822,-29.8161,0	1/1:131:0,131:0:0:131:4642:-417.943,-39.4349,0	1/1:46:0,46:0:0:46:1640:-147.886,-13.8474,0	0/1:180:87,93:87:3124:93:3322:-245.011,0,-227.2	1/1:86:0,86:0:0:86:3075:-276.948,-25.8886,0	1/1:215:0,215:0:0:215:7725:-695.278,-64.7215,0	1/1:251:0,250:0:0:250:8960:-806.166,-75.2575,0	0/1:176:95,81:95:3397:81:2869:-205.463,0,-252.962	0/1:180:98,82:98:3520:82:2940:-210.648,0,-262.823	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:179:0,179:0:0:179:6399:-575.997,-53.8844,0	1/1:179:0,179:0:0:179:6399:-575.98,-53.8844,0	1/1:194:1,193:1:36:193:6928:-619.986,-54.8015,0	1/1:142:1,141:1:36:141:5037:-449.874,-39.148,0	0/1:80:36,44:36:1296:44:1572:-117.689,0,-92.8615	0/1:119:52,67:52:1872:67:2399:-180.344,0,-132.892	0/1:150:71,79:71:2548:79:2832:-209.964,0,-184.416	1/1:68:0,68:0:0:68:2444:-220.214,-20.47,0	1/1:82:0,82:0:0:82:2939:-264.736,-24.6845,0	1/1:104:0,104:0:0:104:3740:-336.799,-31.3071,0	0/1:50:27,23:27:963:23:824:-59.4318,0,-71.9344	0/1:119:53,66:53:1900:66:2360:-176.836,0,-135.455	0/1:94:55,39:55:1976:39:1404:-98.3625,0,-149.818	1/1:154:0,154:0:0:154:5510:-496.026,-46.3586,0	1/1:117:0,117:0:0:117:4175:-375.93,-35.2205,0
chr03	22868964	.	C	T	772853	PASS	AB=0.446252;ABP=327.006;AC=157;AF=0.835106;AN=188;AO=29539;CIGAR=1X;DP=36764;DPB=36764;DPRA=0;EPP=64128.8;EPPR=15670.2;GTI=1;LEN=1;MEANALT=1.09574;MQM=53.4837;MQMR=56.4832;NS=94;NUMALT=1;ODDS=2.60311;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1052660;QR=257271;RO=7215;RPL=22831;RPP=19112.6;RPPR=4625.42;RPR=6708;RUN=1;SAF=22829;SAP=19103.1;SAR=6710;SRF=5567;SRP=4625.42;SRR=1648;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:142:85,57:85:3016:57:2031:-140.008,0,-225.323	1/1:282:0,282:0:0:282:10001:-897.268,-84.8905,0	0/1:305:178,127:178:6368:127:4521:-314.494,0,-474.069	1/1:501:1,500:1:36:500:17820:-1597.24,-147.237,0	1/1:161:0,161:0:0:161:5751:-516.279,-48.4658,0	1/1:122:0,122:0:0:122:4347:-389.884,-36.7257,0	1/1:339:0,339:0:0:339:12103:-1086.11,-102.049,0	1/1:271:0,271:0:0:271:9637:-865.042,-81.5791,0	1/1:226:3,223:3:108:223:7943:-702.659,-57.9576,0	0/1:245:123,122:123:4384:122:4319:-314.286,0,-319.196	1/1:657:2,654:2:72:654:23242:-2074.32,-190.93,0	1/1:137:0,137:0:0:137:4875:-437.364,-41.2411,0	0/1:159:89,70:89:3144:70:2477:-174.869,0,-232.254	1/1:149:0,149:0:0:149:5323:-477.98,-44.8535,0	1/1:129:0,129:0:0:129:4571:-410.3,-38.8329,0	1/1:123:1,122:1:36:122:4345:-386.359,-33.4284,0	0/1:134:69,65:69:2465:65:2315:-167.857,0,-180.907	1/1:89:0,89:0:0:89:3184:-286.126,-26.7917,0	0/1:314:161,153:161:5762:153:5455:-393.717,0,-423.753	1/1:530:1,529:1:36:529:18829:-1685.43,-155.948,0	1/1:323:0,323:0:0:323:11500:-1032.21,-97.2327,0	1/1:253:0,253:0:0:253:8990:-807.272,-76.1606,0	1/1:299:1,298:1:36:298:10623:-950.768,-86.4097,0	1/1:182:1,181:1:36:181:6445:-574.833,-51.1892,0	1/1:144:0,144:0:0:144:5154:-463.286,-43.3483,0	0/1:653:348,305:348:12384:305:10863:-778.245,0,-912.861	1/1:537:1,536:1:36:536:19152:-1715.01,-158.055,0	0/1:57:38,19:38:1355:19:672:-43.4695,0,-104.193	1/1:657:0,657:0:0:657:23499:-2108.68,-197.777,0	1/1:278:17,261:17:593:261:9316:-782.369,-30.916,0	1/1:319:0,319:0:0:319:11385:-1021.81,-96.0286,0	0/1:1200:672,528:672:24047:528:18839:-1326.66,0,-1801.67	0/1:982:532,450:532:18993:450:16031:-1141.4,0,-1412.54	1/1:1489:2,1485:2:72:1485:52860:-4725.84,-441.122,0	1/1:1811:4,1806:4:144:1806:64389:-5757.8,-531.821,0	1/1:1019:0,1019:0:0:1019:36366:-3259.47,-306.75,0	1/1:371:1,370:1:36:370:13122:-1173.96,-108.084,0	1/1:197:0,197:0:0:197:7031:-630.608,-59.3029,0	0/1:643:329,314:329:11696:314:11205:-809.544,0,-856.316	1/1:622:3,619:3:108:619:22102:-1971.41,-177.165,0	0/1:326:209,117:209:7446:117:4177:-277.057,0,-565.686	0/1:313:176,137:176:6289:137:4891:-343.047,0,-470.596	0/1:427:261,166:261:9342:166:5886:-400.273,0,-706.105	0/1:151:82,69:82:2932:69:2455:-175.411,0,-218.076	1/1:128:0,128:0:0:128:4592:-411.365,-38.5318,0	1/1:191:0,191:0:0:191:6792:-609.945,-57.4967,0	1/1:220:1,219:1:36:219:7795:-695.689,-62.6283,0	1/1:486:0,486:0:0:486:17292:-1551.44,-146.301,0	1/1:250:1,249:1:36:249:8913:-796.889,-71.6592,0	0/1:384:214,170:214:7630:170:6041:-427.153,0,-568.764	1/1:338:0,338:0:0:338:12034:-1080.23,-101.748,0	1/1:1073:0,1073:0:0:1073:38366:-3435.73,-323.005,0	0/1:260:141,119:141:5060:119:4250:-303.579,0,-372.549	1/1:145:0,145:0:0:145:5164:-463.427,-43.6494,0	0/1:757:451,305:451:16084:305:10846:-744.018,0,-1218.64	0/1:343:219,124:219:7757:124:4433:-294.733,0,-589.695	0/1:175:83,92:83:2965:92:3308:-244.919,0,-213.291	1/1:961:1,959:1:36:959:34172:-3055.08,-285.75,0	0/1:1100:600,499:600:21415:499:17803:-1262.72,0,-1594.71	1/1:156:0,156:0:0:156:5544:-497.975,-46.9607,0	1/1:205:1,204:1:36:204:7300:-651.614,-58.1129,0	1/1:716:0,715:0:0:715:25562:-2288.6,-215.236,0	1/1:172:0,172:0:0:172:6137:-551.063,-51.7772,0	1/1:330:4,326:4:144:326:11622:-1029.76,-86.0554,0	1/1:116:0,116:0:0:116:4115:-368.993,-34.9195,0	1/1:222:0,222:0:0:222:7916:-709.438,-66.8287,0	1/1:335:2,333:2:72:333:11876:-1057.49,-94.0083,0	0/1:230:176,53:176:6232:53:1866:-98.5056,0,-489.187	1/1:576:8,568:8:279:568:20189:-1782.09,-147.946,0	1/1:111:0,111:0:0:111:3967:-355.594,-33.4143,0	1/1:141:0,141:0:0:141:5040:-451.498,-42.4452,0	1/1:975:1,974:1:36:974:34631:-3095.83,-289.906,0	0/1:253:116,136:116:4082:136:4832:-357.983,0,-288.257	1/1:134:0,134:0:0:134:4755:-426.989,-40.338,0	1/1:366:1,365:1:36:365:12981:-1160.23,-106.61,0	1/1:445:3,442:3:108:442:15783:-1406.89,-123.913,0	0/1:280:174,106:174:6166:106:3749:-252.666,0,-465.557	0/1:250:145,105:145:5195:105:3754:-261.748,0,-389.22	1/1:1183:7,1176:7:252:1176:41922:-3734.19,-333.096,0	1/1:269:0,269:0:0:269:9629:-863.98,-80.9771,0	1/1:275:0,275:0:0:275:9790:-878.732,-82.7833,0	1/1:503:0,503:0:0:503:17885:-1604.94,-151.418,0	1/1:144:0,144:0:0:144:5116:-459.025,-43.3483,0	0/1:193:102,91:102:3644:91:3220:-231.525,0,-268.434	0/1:182:104,78:104:3695:78:2787:-195.752,0,-277.364	0/1:284:164,120:164:5834:120:4283:-298.491,0,-437.187	1/1:43:0,43:0:0:43:1540:-138.357,-12.9443,0	1/1:137:0,137:0:0:137:4873:-437.598,-41.2411,0	1/1:98:1,97:1:36:97:3450:-306.268,-25.9027,0	0/1:765:384,381:384:13718:381:13548:-983.872,0,-1002.7	0/1:1240:602,638:602:21464:638:22723:-1663.15,0,-1555.5	0/1:165:119,46:119:4251:46:1609:-95.2591,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chr03	22876374	.	CA	AA	22026.3	PASS	AB=0.478986;ABP=14.0532;AC=31;AF=0.164894;AN=188;AO=1394;CIGAR=1X1M;DP=9631;DPB=9631;DPRA=1.07798;EPP=3030.04;EPPR=17852.5;GTI=2;LEN=1;MEANALT=1.075;MQM=59.9813;MQMR=59.9917;NS=94;NUMALT=1;ODDS=0.367677;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48965;QR=285449;RO=8220;RPL=0;RPP=3030.04;RPPR=17852.5;RPR=1394;RUN=1;SAF=1394;SAP=3030.04;SAR=0;SRF=8220;SRP=17852.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:30,23:30:1070:23:809:-57.1737,0,-80.6572	0/0:82:81,1:81:2803:1:23:0,-22.3845,-250.208	0/1:240:115,125:115:4026:125:4374:-321.586,0,-290.283	0/0:313:313,0:313:10897:0:0:0,-94.2224,-980.655	0/0:119:117,2:117:4073:2:68:0,-29.365,-360.299	0/0:20:20,0:20:702:0:0:0,-6.0206,-63.503	0/0:98:97,0:97:3396:0:0:0,-29.1999,-305.645	0/0:188:186,2:186:6511:2:57:0,-51.1803,-580.67	0/0:121:121,0:121:4197:0:0:0,-36.4246,-377.915	0/1:96:50,46:50:1697:46:1598:-115.206,0,-124.107	0/0:38:38,0:38:1334:0:0:0,-11.4391,-120.359	0/0:101:100,0:100:3513:0:0:0,-30.103,-316.061	0/1:86:55,31:55:1860:31:1096:-73.0614,0,-141.783	0/0:63:62,0:62:2122:0:0:0,-18.6639,-190.882	0/0:84:84,0:84:2886:0:0:0,-25.2865,-259.975	0/0:69:69,0:69:2338:0:0:0,-20.7711,-210.674	0/1:34:18,16:18:604:16:568:-41.2168,0,-44.4399	0/0:37:37,0:37:1216:0:0:0,-11.1381,-109.727	0/1:19:8,11:8:269:11:392:-29.9005,0,-18.8179	0/0:284:284,0:284:9755:0:0:0,-85.4925,-877.928	0/0:153:153,0:153:5320:0:0:0,-46.0576,-478.94	0/0:67:65,0:65:2271:0:0:0,-19.5669,-204.292	0/0:123:122,1:122:4292:1:36:0,-33.4284,-382.863	0/0:75:75,0:75:2659:0:0:0,-22.5772,-239.556	0/0:80:80,0:80:2776:0:0:0,-24.0824,-250.079	0/1:252:138,114:138:4827:114:3992:-283.609,0,-358.731	0/0:241:240,1:240:8364:1:36:0,-68.95,-749.183	0/1:33:17,16:17:590:16:564:-41.1563,0,-43.4905	0/0:299:297,0:297:10367:0:0:0,-89.4059,-932.614	0/0:115:110,5:110:3850:5:180:0,-18.0664,-330.148	0/0:87:87,0:87:3043:0:0:0,-26.1896,-274.099	0/1:6:5,1:5:170:1:36:-1.79209,0,-13.8278	0/1:19:11,8:11:386:8:288:-20.5478,0,-29.356	0/0:5:5,0:5:167:0:0:0,-1.50515,-15.3581	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:152:152,0:152:5329:0:0:0,-45.7566,-479.749	0/0:104:104,0:104:3631:0:0:0,-31.3071,-326.998	0/1:33:11,19:11:396:19:650:-49.4281,0,-26.592	0/0:8:8,0:8:286:0:0:0,-2.40824,-26.0855	0/1:195:112,83:112:3919:83:2926:-204.87,0,-294.204	0/1:32:20,12:20:694:12:417:-28.2273,0,-53.1468	0/1:244:120,124:120:4167:124:4373:-320.29,0,-301.765	0/1:69:31,38:31:1071:38:1360:-101.916,0,-75.9229	0/0:72:72,0:72:2435:0:0:0,-21.6742,-219.399	0/0:103:103,0:103:3548:0:0:0,-31.0061,-318.903	0/0:149:148,0:148:5126:0:0:0,-44.5524,-461.13	0/0:216:215,1:215:7492:1:36:0,-61.4242,-670.738	0/0:123:123,0:123:4222:0:0:0,-37.0267,-380.168	0/1:181:114,67:114:3962:67:2384:-160.33,0,-302.29	0/0:97:97,0:97:3370:0:0:0,-29.1999,-303.517	0/0:13:13,0:13:458:0:0:0,-3.91339,-41.5538	0/1:149:72,77:72:2486:77:2710:-199.287,0,-179.137	0/0:53:53,0:53:1842:0:0:0,-15.9546,-166.056	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:184:95,88:95:3303:88:3012:-215.858,0,-242.043	0/1:41:16,25:16:561:25:858:-65.1865,0,-38.476	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:10:5,5:5:178:5:176:-13.1747,0,-13.3583	0/0:98:97,0:97:3367:0:0:0,-29.1999,-302.886	0/0:145:144,1:144:4920:1:36:0,-40.0511,-439.359	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:188:188,0:188:6484:0:0:0,-56.5936,-583.66	0/0:189:189,0:189:6636:0:0:0,-56.8947,-597.325	0/0:85:85,0:85:2921:0:0:0,-25.5875,-263.124	0/0:144:144,0:144:5037:0:0:0,-43.3483,-453.483	0/0:168:167,1:167:5817:1:36:0,-46.9748,-520.035	0/1:140:43,97:43:1500:97:3443:-267.935,0,-93.1441	0/0:61:61,0:61:2120:0:0:0,-18.3628,-191.065	0/0:61:61,0:61:2144:0:0:0,-18.3628,-193.225	0/0:40:40,0:40:1387:0:0:0,-12.0412,-125.124	0/0:23:23,0:23:787:0:0:0,-6.92369,-71.1434	0/1:85:47,38:47:1626:38:1322:-93.6879,0,-121.036	0/0:111:111,0:111:3817:0:0:0,-33.4143,-343.733	0/0:120:119,0:119:4131:0:0:0,-35.8226,-371.618	0/0:225:223,0:223:7820:0:0:0,-67.1297,-703.481	0/1:142:71,71:71:2381:71:2494:-181.964,0,-171.795	0/1:94:51,43:51:1738:43:1514:-108.252,0,-128.401	0/0:8:8,0:8:274:0:0:0,-2.40824,-24.993	0/0:144:144,0:144:5004:0:0:0,-43.3483,-450.516	0/0:163:163,0:163:5574:0:0:0,-49.0679,-501.798	0/0:213:213,0:213:7404:0:0:0,-64.1194,-666.332	0/0:57:57,0:57:2006:0:0:0,-17.1587,-180.811	0/1:69:38,31:38:1347:31:1081:-76.8255,0,-100.759	0/1:58:34,24:34:1187:24:864:-60.6228,0,-89.6719	0/1:130:75,54:75:2647:54:1896:-131.724,0,-199.282	0/0:25:25,0:25:886:0:0:0,-7.52575,-80.0584	0/0:91:91,0:91:3129:0:0:0,-27.3937,-281.835	0/0:82:82,0:82:2826:0:0:0,-24.6845,-254.575	0/1:35:24,11:24:834:11:392:-25.084,0,-64.8392	0/1:69:41,28:41:1438:28:1004:-69.9048,0,-108.942	0/1:75:24,51:24:825:51:1792:-138.937,0,-51.9849	0/0:204:204,0:204:7051:0:0:0,-61.4101,-634.667	0/0:120:120,0:120:4157:0:0:0,-36.1236,-374.315
chr03	23002462	.	GGGAGG	GGGAAA,GGGAGA	200340	PASS	AB=0.474899,0.512642;ABP=17.9448,6.79864;AC=157,31;AF=0.835106,0.164894;AN=188;AO=7933,1417;CIGAR=4M2X,5M1X;DP=9449;DPB=9481.33;DPRA=0,1.12317;EPP=17229.3,3079.99;EPPR=5.18177;GTI=0;LEN=2,1;MEANALT=2.35106,2.92683;MQM=59.9824,60;MQMR=60;NS=94;NUMALT=2;ODDS=16.6474;PAIRED=0,0;PAIREDR=0;PAO=17.3333,17.3333;PQA=559.667,559.667;PQR=559.667;PRO=17.3333;QA=275442,50435;QR=27;RO=1;RPL=7924,1417;RPP=17151.2,3079.99;RPPR=5.18177;RPR=9,0;RUN=1,1;SAF=7924,1417;SAP=17151.2,3079.99;SAR=9,0;SRF=1;SRP=5.18177;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:75:0,30,45:0:0:30,45:1033,1600:-214.639,-130.744,-121.713,-84.2442,0,-70.6979	1/1:94:0,94,0:0:0:94,0:3272,0:-294.699,-28.2968,0,-294.699,-28.2968,-294.699	1/2:167:0,74,89:0:0:74,89:2571,3169:-467.33,-258.318,-236.042,-209.039,0,-182.247	1/1:161:0,160,0:0:0:160,0:5572,0:-501.258,-48.1648,0,-501.258,-48.1648,-501.258	1/1:80:0,75,0:0:0:75,0:2586,0:-232.644,-22.5773,0,-232.644,-22.5773,-232.644	1/1:49:0,49,0:0:0:49,0:1733,0:-156.253,-14.7505,0,-156.253,-14.7505,-156.253	1/1:90:0,89,0:0:0:89,0:3074,0:-276.569,-26.7917,0,-276.569,-26.7917,-276.569	1/1:154:0,152,0:0:0:152,0:5307,0:-477.465,-45.7566,0,-477.465,-45.7566,-477.465	1/1:141:0,139,0:0:0:139,0:4824,0:-434.007,-41.8432,0,-434.007,-41.8432,-434.007	1/2:75:0,38,33:0:0:38,33:1315,1176:-202.732,-95.8766,-84.4375,-106.869,0,-96.9353	1/1:39:0,37,1:0:0:37,1:1229,36:-110.542,-11.1381,0,-107.604,-8.20069,-107.303	1/1:96:0,96,0:0:0:96,0:3313,0:-298.337,-28.8989,0,-298.337,-28.8989,-298.337	1/2:73:0,38,34:0:0:38,34:1270,1212:-201.675,-98.8691,-87.43,-102.869,0,-92.6338	1/1:64:0,63,1:0:0:63,1:2174,36:-195.564,-18.9649,0,-192.626,-15.6676,-192.325	1/1:42:0,42,0:0:0:42,0:1432,0:-129.168,-12.6433,0,-129.168,-12.6433,-129.168	1/1:49:0,48,0:0:0:48,0:1686,0:-151.666,-14.4494,0,-151.666,-14.4494,-151.666	1/2:21:0,8,13:0:0:8,13:262,464:-59.3357,-38.1841,-35.7759,-21.4902,0,-17.5768	1/1:25:0,25,0:0:0:25,0:861,0:-77.8014,-7.52575,0,-77.8014,-7.52575,-77.8014	1/2:29:0,15,14:0:0:15,14:520,504:-83.3692,-41.1118,-36.5963,-42.2399,0,-38.0255	1/1:152:0,150,0:0:0:150,0:5262,0:-473.353,-45.1545,0,-473.353,-45.1545,-473.353	1/1:236:0,232,0:0:0:232,0:8021,0:-721.601,-69.839,0,-721.601,-69.839,-721.601	1/1:147:0,147,0:0:0:147,0:5119,0:-460.394,-44.2514,0,-460.394,-44.2514,-460.394	1/1:128:0,127,0:0:0:127,0:4428,0:-398.285,-38.2308,0,-398.285,-38.2308,-398.285	1/1:100:0,99,0:0:0:99,0:3373,0:-303.452,-29.802,0,-303.452,-29.802,-303.452	1/1:94:0,94,0:0:0:94,0:3311,0:-298.209,-28.2968,0,-298.209,-28.2968,-298.209	1/2:274:1,169,102:1:27:169,102:5884,3629:-771.793,-293.643,-244.897,-476.336,0,-447.76	1/1:162:0,161,0:0:0:161,0:5594,0:-503.121,-48.4658,0,-503.121,-48.4658,-503.121	1/2:20:0,6,14:0:0:6,14:216,496:-58.3861,-40.7598,-38.9537,-17.9843,0,-13.7699	1/1:228:0,225,1:0:0:225,1:7810,36:-702.616,-67.7318,0,-699.678,-64.7794,-699.377	1/1:157:0,148,7:0:0:148,7:5103,252:-459.071,-44.5524,0,-438.509,-23.9645,-436.401	1/1:98:0,97,0:0:0:97,0:3337,0:-300.189,-29.1999,0,-300.189,-29.1999,-300.189	1/2:27:0,17,10:0:0:17,10:595,356:-77.7762,-29.3709,-24.2534,-48.7589,0,-45.7486	1/2:55:0,29,26:0:0:29,26:1003,932:-157.866,-76.3721,-67.6422,-81.8467,0,-74.0199	1/1:28:0,26,0:0:0:26,0:882,0:-79.356,-7.82678,0,-79.356,-7.82678,-79.356	1/1:28:0,28,0:0:0:28,0:977,0:-88.2405,-8.42884,0,-88.2405,-8.42884,-88.2405	1/1:64:0,64,0:0:0:64,0:2197,0:-197.99,-19.2659,0,-197.99,-19.2659,-197.99	1/1:167:0,165,1:0:0:165,1:5661,36:-509.263,-49.67,0,-506.325,-46.7325,-506.024	1/1:204:0,199,3:0:0:199,3:6956,94:-624.43,-59.905,0,-616.877,-52.3681,-615.974	1/2:31:0,14,17:0:0:14,17:482,612:-89.4355,-50.2959,-46.0815,-39.4908,0,-34.3733	1/1:11:0,11,0:0:0:11,0:378,0:-34.3495,-3.31133,0,-34.3495,-3.31133,-34.3495	1/2:110:0,52,58:0:0:52,58:1835,2061:-317.721,-168.3,-152.646,-149.775,0,-132.316	1/2:36:0,18,18:0:0:18,18:616,639:-102.412,-52.4197,-47.0012,-50.3403,0,-44.9218	1/2:199:0,84,109:0:0:84,109:2875,3877:-549.303,-315.953,-290.666,-233.339,0,-200.527	1/2:45:0,23,21:0:0:23,21:795,748:-125.61,-61.0184,-54.0948,-64.6368,0,-58.3152	1/1:51:0,51,0:0:0:51,0:1737,0:-156.556,-15.3525,0,-156.556,-15.3525,-156.556	1/1:156:0,156,0:0:0:156,0:5441,0:-489.772,-46.9607,0,-489.772,-46.9607,-489.772	1/1:118:0,117,0:0:0:117,0:4047,0:-364.061,-35.2205,0,-364.061,-35.2205,-364.061	1/1:254:0,252,1:0:0:252,1:8699,36:-782.539,-75.8596,0,-779.602,-72.9086,-779.301	1/1:107:0,107,0:0:0:107,0:3719,0:-334.912,-32.2102,0,-334.912,-32.2102,-334.912	1/2:132:0,67,64:0:0:67,64:2336,2279:-375.716,-185.742,-165.573,-189.964,0,-170.698	1/1:171:0,170,0:0:0:170,0:5938,0:-534.207,-51.1751,0,-534.207,-51.1751,-534.207	1/1:15:0,14,0:0:0:14,0:493,0:-44.4915,-4.21442,0,-44.4915,-4.21442,-44.4915	1/2:122:0,58,64:0:0:58,64:2050,2264:-351.607,-184.65,-167.191,-167.207,0,-147.941	1/1:70:0,69,0:0:0:69,0:2368,0:-213.015,-20.7711,0,-213.015,-20.7711,-213.015	1/2:36:0,12,24:0:0:12,24:406,829:-100.61,-67.6995,-64.0871,-33.251,0,-26.0263	1/2:156:0,80,75:0:0:80,75:2768,2658:-441.403,-216.477,-192.395,-224.865,0,-2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chr03	23489147	.	A	G	24047.8	PASS	AB=0.531143;ABP=25.0561;AC=29;AF=0.154255;AN=188;AO=1399;CIGAR=1X;DP=8543;DPB=8543;DPRA=1.03678;EPP=2997.63;EPPR=15041.8;GTI=0;LEN=1;MEANALT=1.05556;MQM=59.9278;MQMR=59.9924;NS=94;NUMALT=1;ODDS=4.87438;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=49975;QR=253778;RO=7140;RPL=4;RPP=3006.26;RPPR=15041.8;RPR=1395;RUN=1;SAF=1398;SAP=3032.22;SAR=1;SRF=7140;SRP=15507.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:33:13,20:13:441:20:716:-54.8337,0,-30.0792	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.303	0/1:128:54,74:54:1920:74:2646:-199.853,0,-134.545	0/0:212:211,0:211:7489:0:0:0,-63.5173,-673.74	0/0:54:54,0:54:1928:0:0:0,-16.2556,-173.797	0/0:33:33,0:33:1172:0:0:0,-9.93399,-105.787	0/0:77:77,0:77:2717:0:0:0,-23.1793,-244.774	0/0:150:149,0:149:5264:0:0:0,-44.8535,-473.686	0/0:64:64,0:64:2253:0:0:0,-19.2659,-203.032	0/1:62:37,25:37:1316:25:884:-61.2145,0,-100.078	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/0:119:119,0:119:4252:0:0:0,-35.8226,-382.86	0/0:101:101,0:101:3599:0:0:0,-30.404,-324.117	0/0:74:74,0:74:2632:0:0:0,-22.2762,-237.128	0/0:101:101,0:101:3608:0:0:0,-30.404,-324.927	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.541	0/1:34:15,19:15:532:19:675:-50.8419,0,-37.9781	0/0:43:43,0:43:1533:0:0:0,-12.9443,-138.261	0/1:38:19,19:19:684:19:684:-50.4512,0,-50.4512	0/0:101:99,2:99:3505:2:72:0,-23.5673,-308.825	0/0:143:143,0:143:5069:0:0:0,-43.0473,-456.359	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.592	0/0:81:81,0:81:2856:0:0:0,-24.3834,-257.281	0/0:46:46,0:46:1632:0:0:0,-13.8474,-147.169	0/0:47:47,0:47:1672:0:0:0,-14.1484,-150.767	0/1:253:122,130:122:4348:130:4656:-343.065,0,-315.367	0/0:234:234,0:234:8348:0:0:0,-70.441,-751.331	0/1:34:16,18:16:572:18:648:-48.4169,0,-41.5784	0/0:189:189,0:189:6725:0:0:0,-56.8947,-605.329	0/0:117:116,1:116:4125:1:36:0,-31.6222,-367.837	0/0:121:121,0:121:4320:0:0:0,-36.4246,-388.977	0/1:17:2,15:2:68:15:531:-42.7747,0,-1.3402	0/1:21:7,14:7:252:14:504:-39.3765,0,-16.7073	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:19:19,0:19:623:0:0:0,-5.71957,-56.3765	0/0:35:35,0:35:1233:0:0:0,-10.536,-111.272	0/0:211:211,0:211:7532:0:0:0,-63.5173,-677.916	0/0:133:133,0:133:4740:0:0:0,-40.037,-426.761	0/1:67:41,26:41:1460:26:932:-64.0299,0,-111.527	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:133:68,65:68:2397:65:2313:-168.392,0,-175.95	0/0:49:48,1:48:1720:1:36:0,-11.1522,-151.487	0/1:190:83,107:83:2952:107:3826:-287.34,0,-208.719	0/1:66:29,37:29:1036:37:1328:-99.9543,0,-73.6683	0/0:54:54,0:54:1913:0:0:0,-16.2556,-172.445	0/0:86:86,0:86:3056:0:0:0,-25.8886,-275.271	0/0:97:97,0:97:3414:0:0:0,-29.1999,-307.475	0/0:192:192,0:192:6852:0:0:0,-57.7978,-616.753	0/0:97:97,0:97:3444:0:0:0,-29.1999,-310.175	0/1:133:58,75:58:2042:75:2696:-202.847,0,-144.012	0/0:75:75,0:75:2644:0:0:0,-22.5772,-238.209	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:112:52,60:52:1840:60:2156:-160.592,0,-132.165	0/0:63:61,2:61:2165:2:72:0,-12.1282,-188.279	0/1:16:8,8:8:273:8:280:-20.7228,0,-20.0837	0/1:131:67,64:67:2392:64:2286:-166.512,0,-176.103	0/1:42:28,14:28:1000:14:504:-33.0548,0,-77.6721	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:15:6,9:6:204:9:316:-24.2634,0,-14.1779	0/0:102:102,0:102:3640:0:0:0,-30.7051,-327.806	0/0:123:123,0:123:4400:0:0:0,-37.0267,-396.173	0/0:16:16,0:16:561:0:0:0,-4.81648,-50.8171	0/0:151:151,0:151:5369:0:0:0,-45.4555,-483.345	0/0:166:165,1:165:5849:1:36:0,-46.3727,-522.843	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.993	0/0:76:76,0:76:2689:0:0:0,-22.8783,-242.255	0/0:203:203,0:203:7197:0:0:0,-61.1091,-647.793	0/1:140:35,105:35:1237:105:3756:-296.096,0,-69.4881	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/0:58:58,0:58:2060:0:0:0,-17.4597,-185.672	0/0:59:59,0:59:2108:0:0:0,-17.7608,-189.989	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/1:121:73,48:73:2585:48:1728:-119.381,0,-196.474	0/0:52:52,0:52:1836:0:0:0,-15.6536,-165.521	0/0:120:120,0:120:4288:0:0:0,-36.1236,-386.098	0/0:151:150,1:150:5280:1:36:0,-41.8573,-471.738	0/1:159:73,86:73:2597:86:3017:-223.886,0,-186.114	0/0:81:80,1:80:2842:1:36:0,-20.8166,-252.449	0/1:25:13,12:13:468:12:432:-31.6954,0,-34.9339	0/1:99:49,50:49:1715:50:1784:-131.041,0,-124.827	0/0:116:116,0:116:4110:0:0:0,-34.9195,-370.085	0/0:138:138,0:138:4885:0:0:0,-41.5421,-439.807	0/0:66:66,0:66:2341:0:0:0,-19.868,-210.879	0/1:74:36,38:36:1280:38:1368:-101.145,0,-93.227	0/1:65:34,31:34:1220:31:1101:-79.8314,0,-90.5399	0/0:158:158,0:158:5676:0:0:0,-47.5627,-510.957	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/0:87:87,0:87:3084:0:0:0,-26.1896,-277.788	0/0:92:92,0:92:3273:0:0:0,-27.6948,-294.79	0/1:80:43,37:43:1544:37:1328:-95.7398,0,-115.171	0/1:166:84,81:84:2993:81:2876:-209.046,0,-219.571	0/1:163:60,103:60:2152:103:3680:-282.336,0,-144.879	0/0:91:91,0:91:3195:0:0:0,-27.3937,-287.773	0/0:116:116,0:116:4140:0:0:0,-34.9195,-372.785
chr03	23489170	.	G	C	22820.2	PASS	AB=0.533719;ABP=28.637;AC=29;AF=0.154255;AN=188;AO=1396;CIGAR=1X;DP=8471;DPB=8471;DPRA=1.13904;EPP=3025.71;EPPR=15353.1;GTI=0;LEN=1;MEANALT=1.05263;MQM=59.942;MQMR=59.9949;NS=94;NUMALT=1;ODDS=4.59594;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48800;QR=249110;RO=7069;RPL=1396;RPP=3034.39;RPPR=15335.8;RPR=0;RUN=1;SAF=1395;SAP=3025.71;SAR=1;SRF=7067;SRP=15335.8;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:13,19:13:464:19:672:-51.1739,0,-32.4645	0/0:62:61,0:61:2136:0:0:0,-18.3628,-192.147	0/1:130:52,78:52:1823:78:2689:-203.116,0,-125.214	0/0:206:206,0:206:7319:0:0:0,-62.0122,-658.764	0/0:53:53,0:53:1882:0:0:0,-15.9546,-169.657	0/0:32:32,0:32:1139:0:0:0,-9.63296,-102.818	0/0:77:77,0:77:2743:0:0:0,-23.1793,-247.113	0/0:151:151,0:151:5348:0:0:0,-45.4555,-481.457	0/0:63:63,0:63:2218:0:0:0,-18.9649,-199.884	0/1:62:36,26:36:1257:26:923:-64.7229,0,-94.7661	0/0:72:72,0:72:2491:0:0:0,-21.6742,-224.441	0/0:117:117,0:117:4040:0:0:0,-35.2205,-363.795	0/0:99:99,0:99:3444:0:0:0,-29.802,-310.174	0/0:72:72,0:72:2532:0:0:0,-21.6742,-228.131	0/0:101:101,0:101:3532:0:0:0,-30.404,-318.092	0/0:64:64,0:64:2211:0:0:0,-19.2659,-199.251	0/1:35:15,20:15:528:20:708:-53.5089,0,-37.3153	0/0:43:43,0:43:1532:0:0:0,-12.9443,-138.173	0/1:38:19,19:19:684:19:680:-50.09,0,-50.4512	0/0:99:97,2:97:3383:2:72:0,-22.9652,-297.85	0/0:139:139,0:139:4918:0:0:0,-41.8432,-442.776	0/0:88:88,0:88:3104:0:0:0,-26.4906,-279.585	0/0:80:80,0:80:2799:0:0:0,-24.0824,-252.151	0/0:45:45,0:45:1603:0:0:0,-13.5463,-144.559	0/0:47:47,0:47:1671:0:0:0,-14.1484,-150.677	0/1:253:119,134:119:4195:134:4719:-348.703,0,-301.572	0/0:233:233,0:233:8238:0:0:0,-70.14,-741.439	0/1:35:17,18:17:599:18:625:-46.0373,0,-43.702	0/0:182:181,1:181:6454:1:27:0,-52.0877,-578.246	0/0:117:116,1:116:4090:1:36:0,-31.6222,-364.69	0/0:120:120,0:120:4236:0:0:0,-36.1236,-381.423	0/1:16:2,14:2:72:14:496:-39.6637,0,-2.02024	0/1:22:8,14:8:288:14:504:-39.0754,0,-19.6447	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:20:20,0:20:694:0:0:0,-6.0206,-62.7804	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/0:215:215,0:215:7553:0:0:0,-64.7214,-679.82	0/0:128:128,0:128:4558:0:0:0,-38.5318,-410.387	0/1:66:40,26:40:1411:26:903:-61.7158,0,-107.419	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:133:69,64:69:2435:64:2225:-160.473,0,-179.367	0/0:48:47,1:47:1633:1:36:0,-10.8512,-143.658	0/1:187:82,105:82:2886:105:3660:-273.313,0,-203.683	0/1:61:28,33:28:969:33:1129:-83.5469,0,-69.1389	0/0:52:52,0:52:1809:0:0:0,-15.6536,-163.087	0/0:90:90,0:90:3161:0:0:0,-27.0927,-284.715	0/0:95:95,0:95:3348:0:0:0,-28.5978,-301.536	0/0:191:190,1:190:6738:1:36:0,-53.8985,-602.901	0/0:97:97,0:97:3448:0:0:0,-29.1999,-310.535	0/1:128:55,73:55:1939:73:2530:-189.414,0,-136.254	0/0:73:73,0:73:2547:0:0:0,-21.9752,-229.481	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:113:52,60:52:1847:60:2082:-153.57,0,-132.434	0/0:61:59,2:59:2100:2:72:0,-11.5261,-182.433	0/1:16:8,8:8:284:8:271:-19.9029,0,-21.0869	0/1:129:64,63:64:2265:63:2224:-161.949,0,-165.637	0/1:41:26,15:26:928:15:536:-36.2326,0,-71.496	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:15:5,10:5:180:10:356:-27.8658,0,-12.0366	0/0:98:98,0:98:3468:0:0:0,-29.5009,-312.333	0/0:120:120,0:120:4137:0:0:0,-36.1236,-372.521	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:147:146,0:146:5203:0:0:0,-43.9504,-468.049	0/0:162:161,1:161:5704:1:36:0,-45.1686,-509.882	0/0:55:55,0:55:1933:0:0:0,-16.5566,-174.245	0/0:76:76,0:76:2700:0:0:0,-22.8783,-243.243	0/0:205:204,0:204:7203:0:0:0,-61.4101,-647.973	0/1:140:34,106:34:1201:106:3705:-291.505,0,-66.2495	0/0:61:61,0:61:2137:0:0:0,-18.3628,-192.594	0/0:57:57,0:57:1993:0:0:0,-17.1587,-179.643	0/0:60:60,0:60:2107:0:0:0,-18.0618,-189.897	0/0:25:25,0:25:883:0:0:0,-7.52575,-79.7875	0/1:118:70,48:70:2455:48:1693:-117.132,0,-185.682	0/0:53:53,0:53:1870:0:0:0,-15.9546,-168.578	0/0:122:122,0:122:4294:0:0:0,-36.7257,-386.638	0/0:158:157,1:157:5585:1:36:0,-43.9645,-499.177	0/1:154:72,82:72:2539:82:2879:-212.987,0,-182.401	0/0:80:79,1:79:2789:1:36:0,-20.5156,-247.684	0/1:26:13,13:13:468:13:458:-33.7273,0,-34.6329	0/1:97:49,48:49:1724:48:1698:-123.905,0,-126.242	0/0:114:114,0:114:4043:0:0:0,-34.3174,-364.058	0/0:139:139,0:139:4897:0:0:0,-41.8432,-440.884	0/0:67:67,0:67:2359:0:0:0,-20.169,-212.56	0/1:75:37,38:37:1287:38:1348:-99.043,0,-93.5528	0/1:64:34,30:34:1200:30:1034:-74.1013,0,-89.0397	0/0:156:156,0:156:5432:0:0:0,-46.9607,-489.021	0/0:22:22,0:22:779:0:0:0,-6.62266,-70.4321	0/0:83:83,0:83:2855:0:0:0,-24.9855,-257.19	0/0:91:91,0:91:3187:0:0:0,-27.3937,-287.059	0/1:78:43,35:43:1500:35:1235:-87.9731,0,-111.81	0/1:167:83,84:83:2885:84:2904:-211.323,0,-209.616	0/1:164:62,102:62:2207:102:3527:-268.274,0,-149.526	0/0:90:90,0:90:3171:0:0:0,-27.0927,-285.615	0/0:119:119,0:119:4197:0:0:0,-35.8226,-377.916
chr03	23539543	.	T	A	70369.3	PASS	AB=0.491911;ABP=6.62851;AC=29;AF=0.154255;AN=188;AO=3162;CIGAR=1X;DP=23234;DPB=23234;DPRA=1.15614;EPP=6860.52;EPPR=43547.5;GTI=0;LEN=1;MEANALT=1.13043;MQM=59.9557;MQMR=59.9884;NS=94;NUMALT=1;ODDS=20.2776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=112009;QR=715315;RO=20057;RPL=1811;RPP=148.325;RPPR=273.625;RPR=1351;RUN=1;SAF=1810;SAP=147.064;SAR=1352;SRF=10818;SRP=272.941;SRR=9239;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:98:37,61:37:1304:61:2163:-165.436,0,-88.1604	0/0:401:400,1:400:14308:1:36:0,-117.115,-1283.87	0/1:303:152,151:152:5440:151:5377:-392.851,0,-398.517	0/0:531:531,0:531:18964:0:0:0,-159.847,-1706.13	0/0:225:224,1:224:7935:1:36:0,-64.1335,-710.579	0/0:77:77,0:77:2764:0:0:0,-23.1793,-249.001	0/0:406:404,2:404:14429:2:72:0,-115.381,-1291.52	0/0:472:471,0:471:16831:0:0:0,-141.785,-1514.08	0/0:272:272,0:272:9712:0:0:0,-81.8802,-874.033	0/1:196:103,93:103:3683:93:3316:-239.658,0,-272.671	0/0:172:172,0:172:6112:0:0:0,-51.7772,-550.184	0/0:176:176,0:176:6288:0:0:0,-52.9813,-566.015	0/0:158:158,0:158:5672:0:0:0,-47.5627,-510.596	0/0:178:178,0:178:6302:0:0:0,-53.5833,-567.277	0/0:169:168,0:168:6011:0:0:0,-50.573,-540.775	0/0:176:176,0:176:6250:0:0:0,-52.9813,-561.234	0/1:166:82,84:82:2919:84:2987:-219.084,0,-212.974	0/0:170:170,0:170:6078:0:0:0,-51.1751,-547.122	0/1:128:72,56:72:2564:56:2004:-142.102,0,-192.479	0/0:1102:1100,1:1100:39296:1:32:0,-328.575,-3531.91	0/0:386:385,1:385:13684:1:36:0,-112.599,-1227.75	0/0:281:281,0:281:9992:0:0:0,-84.5894,-899.206	0/0:174:174,0:174:6193:0:0:0,-52.3792,-557.467	0/0:382:382,0:382:13689:0:0:0,-114.993,-1231.79	0/0:210:210,0:210:7451:0:0:0,-63.2163,-670.639	0/1:784:438,345:438:15619:345:12126:-855.132,0,-1169.34	0/0:444:443,1:443:15797:1:36:0,-130.059,-1417.83	0/1:115:68,47:68:2425:47:1648:-113.986,0,-183.886	0/0:594:593,0:593:21120:0:0:0,-178.511,-1899.92	0/0:258:254,4:254:8999:4:144:0,-64.3521,-796.584	0/0:252:252,0:252:8984:0:0:0,-75.8596,-808.54	0/1:22:13,9:13:468:9:315:-22.0646,0,-35.837	0/1:43:17,26:17:593:26:924:-70.5334,0,-40.7504	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:451:451,0:451:16087:0:0:0,-135.765,-1447.52	0/0:430:430,0:430:15301:0:0:0,-129.443,-1376.81	0/1:153:64,89:64:2280:89:3145:-237.211,0,-159.405	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:476:261,215:261:9314:215:7625:-542.946,0,-694.936	0/0:112:112,0:112:4003:0:0:0,-33.7154,-360.459	0/1:394:214,180:214:7639:180:6344:-452.453,0,-568.94	0/1:242:116,124:116:4139:124:4372:-321.03,0,-300.087	0/0:177:177,0:177:6324:0:0:0,-53.2823,-569.254	0/0:233:233,0:233:8281:0:0:0,-70.14,-745.304	0/0:310:310,0:310:11027:0:0:0,-93.3193,-992.33	0/0:308:308,0:308:10955:0:0:0,-92.7172,-985.85	0/0:231:230,1:230:8161:1:36:0,-65.9397,-730.908	0/1:445:211,234:211:7489:234:8316:-614.496,0,-540.099	0/0:443:443,0:443:15858:0:0:0,-133.356,-1426.91	0/0:30:30,0:30:1048:0:0:0,-9.0309,-94.6273	0/1:429:221,208:221:7916:208:7395:-536.462,0,-583.322	0/0:114:113,1:113:4039:1:36:0,-30.7191,-360.1	0/1:25:13,12:13:464:12:428:-31.3331,0,-34.5718	0/1:319:176,143:176:6268:143:5100:-363.117,0,-468.187	0/1:140:76,64:76:2720:64:2248:-160.438,0,-202.899	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:36:26,10:26:928:10:338:-19.9089,0,-73.0012	0/0:140:139,1:139:4954:1:36:0,-38.5459,-442.41	0/0:253:252,0:252:9035:0:0:0,-75.8596,-812.765	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:383:382,0:382:13628:0:0:0,-114.993,-1225.95	0/0:419:417,2:417:14856:2:72:0,-119.295,-1329.94	0/0:196:196,0:196:6964:0:0:0,-59.0019,-626.827	0/0:206:206,0:206:7278:0:0:0,-62.0122,-655.076	0/0:443:437,6:437:15544:6:212:0,-113.931,-1379.21	0/1:201:80,121:80:2859:121:4307:-327.302,0,-197.04	0/0:75:73,2:73:2615:2:72:0,-15.7405,-228.76	0/0:187:187,0:187:6668:0:0:0,-56.2926,-600.197	0/0:190:190,0:190:6803:0:0:0,-57.1957,-612.341	0/0:53:53,0:53:1890:0:0:0,-15.9546,-170.377	0/1:164:83,81:83:2964:81:2898:-211.687,0,-217.625	0/0:174:173,0:173:6188:0:0:0,-52.0782,-556.658	0/0:449:448,0:448:15928:0:0:0,-134.861,-1432.86	0/0:553:553,0:553:19702:0:0:0,-166.47,-1772.72	0/1:234:118,116:118:4203:116:4128:-301.252,0,-308.012	0/0:277:275,1:275:9856:1:32:0,-80.2248,-883.762	0/1:31:18,13:18:644:13:458:-32.2221,0,-48.9587	0/1:322:176,146:176:6299:146:5175:-368.961,0,-470.071	0/0:217:216,1:216:7740:1:32:0,-62.1242,-693.362	0/0:469:466,2:466:16621:2:68:0,-134.778,-1489.09	0/0:238:238,0:238:8496:0:0:0,-71.6451,-764.641	0/1:170:85,84:85:3044:84:3011:-219.93,0,-222.956	0/1:282:146,136:146:5201:136:4842:-351.045,0,-383.34	0/0:319:318,0:318:11362:0:0:0,-95.7275,-1022.1	0/0:120:120,0:120:4300:0:0:0,-36.1236,-387.177	0/0:205:205,0:205:7348:0:0:0,-61.7111,-661.367	0/0:161:161,0:161:5772:0:0:0,-48.4658,-519.594	0/1:85:41,44:41:1464:44:1492:-108.979,0,-106.469	0/1:191:77,114:77:2723:114:4031:-305.465,0,-187.815	0/1:173:47,126:47:1688:126:4436:-347.334,0,-100.129	0/0:238:236,2:236:8394:2:72:0,-64.8084,-748.632	0/0:274:274,0:274:9755:0:0:0,-82.4822,-877.902
chr03	23609825	.	G	T	16288.3	PASS	AB=0.436711;ABP=88.4914;AC=31;AF=0.164894;AN=188;AO=1084;CIGAR=1X;DP=9868;DPB=9868;DPRA=0.900611;EPP=2356.89;EPPR=19059.9;GTI=4;LEN=1;MEANALT=1.07317;MQM=59.9465;MQMR=59.9945;NS=94;NUMALT=1;ODDS=1.98572;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38334;QR=311521;RO=8776;RPL=0;RPP=2356.89;RPPR=19051.2;RPR=1084;RUN=1;SAF=0;SAP=2356.89;SAR=1084;SRF=1;SRP=19051.2;SRR=8775;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:35:14,21:14:491:21:756:-57.8312,0,-33.9851	0/0:31:31,0:31:1097:0:0:0,-9.33193,-99.038	0/1:156:95,61:95:3317:61:2165:-148.154,0,-251.785	0/0:298:298,0:298:10609:0:0:0,-89.7069,-954.726	0/0:87:87,0:87:3086:0:0:0,-26.1896,-277.969	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/0:56:56,0:56:1996:0:0:0,-16.8577,-179.914	0/0:215:214,0:214:7539:0:0:0,-64.4204,-678.199	0/0:121:121,0:121:4295:0:0:0,-36.4246,-386.728	0/1:83:38,45:38:1355:45:1586:-118.041,0,-97.2642	0/0:42:42,0:42:1480:0:0:0,-12.6433,-133.494	0/0:120:120,0:120:4261:0:0:0,-36.1236,-383.67	0/0:89:88,1:88:3089:1:36:0,-23.1934,-274.639	0/0:63:63,0:63:2203:0:0:0,-18.9649,-198.533	0/0:104:104,0:104:3717:0:0:0,-31.3071,-334.73	0/0:74:74,0:74:2592:0:0:0,-22.2762,-233.529	0/1:34:15,19:15:536:19:670:-50.391,0,-38.3398	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/1:43:18,25:18:622:25:896:-68.0161,0,-43.3578	0/0:217:215,1:215:7650:1:36:0,-61.784,-684.94	0/0:211:211,0:211:7434:0:0:0,-63.5173,-669.11	0/0:192:191,1:191:6805:1:36:0,-54.1995,-608.926	0/0:96:95,1:95:3392:1:36:0,-25.3006,-301.898	0/0:65:65,0:65:2311:0:0:0,-19.5669,-208.25	0/0:126:126,0:126:4440:0:0:0,-37.9298,-399.773	0/1:257:144,113:144:5114:113:4025:-285.074,0,-383.021	0/0:309:309,0:309:11019:0:0:0,-93.0183,-991.607	0/1:36:12,23:12:432:23:816:-62.8661,0,-28.3253	0/0:323:323,0:323:11463:0:0:0,-97.2327,-1031.55	0/0:56:55,1:55:1937:1:36:0,-13.2594,-170.983	0/0:122:122,0:122:4353:0:0:0,-36.7257,-391.944	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:39:27,12:27:959:12:432:-27.481,0,-74.8852	0/0:8:8,0:8:275:0:0:0,-2.40824,-25.0835	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:28:28,0:28:984:0:0:0,-8.42884,-88.8707	0/0:240:238,0:238:8427:0:0:0,-71.6451,-758.079	0/0:160:158,2:158:5600:2:72:0,-41.3281,-497.287	0/1:34:18,16:18:631:16:568:-41.2168,0,-46.8807	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:118:69,49:69:2468:49:1707:-118.387,0,-186.853	0/0:42:41,1:41:1472:1:36:0,-9.04498,-129.178	0/1:190:132,58:132:4684:58:2019:-124.772,0,-364.527	0/1:43:22,21:22:779:21:748:-54.701,0,-57.4878	0/0:64:64,0:64:2269:0:0:0,-19.2659,-204.471	0/0:167:167,0:167:5909:0:0:0,-50.272,-531.921	0/0:177:176,0:176:6245:0:0:0,-52.9813,-561.788	0/0:292:291,1:291:10301:1:36:0,-84.3025,-923.416	0/0:95:95,0:95:3399:0:0:0,-28.5978,-306.124	0/1:92:64,28:64:2270:28:1004:-62.9673,0,-176.864	0/0:173:173,0:173:6200:0:0:0,-52.0782,-558.096	0/1:21:19,2:19:684:2:72:-0.515093,0,-55.5687	0/1:155:96,59:96:3416:59:2109:-143.417,0,-260.994	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/1:145:90,54:90:3210:54:1893:-126.936,0,-245.414	0/1:67:31,36:31:1103:36:1282:-95.5134,0,-79.4108	0/1:8:6,2:6:201:2:72:-4.42848,0,-16.0088	0/1:12:7,5:7:243:5:161:-11.1942,0,-18.5951	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.844	0/0:112:112,0:112:3947:0:0:0,-33.7154,-355.425	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/0:255:255,0:255:9008:0:0:0,-76.7626,-810.704	0/0:220:220,0:220:7817:0:0:0,-66.2266,-703.563	0/0:71:71,0:71:2531:0:0:0,-21.3731,-228.041	0/0:130:130,0:130:4664:0:0:0,-39.1339,-419.92	0/0:212:211,1:211:7504:1:36:0,-60.2201,-671.808	0/1:126:57,69:57:2019:69:2440:-181.924,0,-144.053	0/0:24:24,0:24:806:0:0:0,-7.22472,-72.8478	0/0:62:62,0:62:2220:0:0:0,-18.6639,-200.064	0/0:50:50,0:50:1777:0:0:0,-15.0515,-160.211	0/0:28:28,0:28:999:0:0:0,-8.42884,-90.2245	0/1:160:88,72:88:3143:72:2561:-182.574,0,-234.931	0/0:126:126,0:126:4510:0:0:0,-37.9298,-406.067	0/0:73:73,0:73:2595:0:0:0,-21.9752,-233.799	0/0:218:218,0:218:7788:0:0:0,-65.6245,-700.95	0/1:113:66,47:66:2355:47:1657:-115.399,0,-178.192	0/0:112:112,0:112:3990:0:0:0,-33.7154,-359.291	0/1:16:10,6:10:356:6:201:-13.6006,0,-27.5648	0/1:111:71,40:71:2515:40:1432:-95.7633,0,-193.186	0/0:135:135,0:135:4766:0:0:0,-40.639,-429.098	0/0:239:238,1:238:8441:1:36:0,-68.3479,-756.101	0/0:72:72,0:72:2558:0:0:0,-21.6742,-230.47	0/1:89:44,45:44:1572:45:1580:-115.697,0,-114.98	0/1:54:31,23:31:1090:23:805:-56.5129,0,-82.1523	0/0:149:149,0:149:5237:0:0:0,-44.8535,-471.469	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.102	0/0:76:76,0:76:2679:0:0:0,-22.8783,-241.354	0/0:67:67,0:67:2392:0:0:0,-20.169,-215.537	0/1:46:20,26:20:716:26:924:-69.6303,0,-50.9203	0/1:69:41,28:41:1442:28:975:-67.2804,0,-109.303	0/1:85:26,59:26:932:59:2058:-159.899,0,-58.6113	0/0:187:187,0:187:6659:0:0:0,-56.2926,-599.389	0/0:98:97,0:97:3446:0:0:0,-29.1999,-309.994
chr03	23609844	.	C	G	23273.6	PASS	AB=0.43745;ABP=88.3085;AC=30;AF=0.159574;AN=188;AO=1108;CIGAR=1X;DP=10049;DPB=10049;DPRA=0.872866;EPP=76.7698;EPPR=198.925;GTI=2;LEN=1;MEANALT=1.05;MQM=59.963;MQMR=59.9947;NS=94;NUMALT=1;ODDS=1.21589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=39381;QR=320431;RO=8938;RPL=457;RPP=76.7698;RPPR=198.925;RPR=651;RUN=1;SAF=0;SAP=2409;SAR=1108;SRF=2;SRP=19394.3;SRR=8936;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:16,24:16:576:24:856:-65.3199,0,-40.1338	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/1:159:97,61:97:3467:61:2145:-145.393,0,-264.319	0/0:305:305,0:305:10951:0:0:0,-91.8141,-985.481	0/0:88:88,0:88:3152:0:0:0,-26.4906,-283.905	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/0:221:221,0:221:7920:0:0:0,-66.5276,-712.823	0/0:117:117,0:117:4147:0:0:0,-35.2205,-373.412	0/1:85:38,47:38:1355:47:1682:-126.08,0,-96.6622	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:120:120,0:120:4312:0:0:0,-36.1236,-388.255	0/0:89:88,1:88:3168:1:36:0,-23.1934,-281.744	0/0:63:63,0:63:2249:0:0:0,-18.9649,-202.671	0/0:108:108,0:108:3884:0:0:0,-32.5112,-349.753	0/0:76:76,0:76:2724:0:0:0,-22.8783,-245.403	0/1:38:15,23:15:540:23:824:-63.0442,0,-37.4974	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/1:42:18,24:18:630:24:860:-65.0786,0,-44.3814	0/0:220:219,1:219:7868:1:36:0,-62.6283,-704.545	0/0:214:214,0:214:7668:0:0:0,-64.4204,-690.152	0/0:198:197,1:197:7072:1:36:0,-56.0057,-632.939	0/0:98:97,1:97:3464:1:21:0,-27.401,-309.873	0/0:64:64,0:64:2291:0:0:0,-19.2659,-206.451	0/0:127:127,0:127:4552:0:0:0,-38.2308,-409.846	0/1:263:148,115:148:5296:115:4099:-289.926,0,-397.604	0/0:313:313,0:313:11252:0:0:0,-94.2224,-1012.56	0/1:37:13,24:13:468:24:856:-66.223,0,-31.3215	0/0:324:323,0:323:11590:0:0:0,-97.2327,-1042.6	0/0:55:54,1:54:1923:1:32:0,-13.3573,-169.919	0/0:126:126,0:126:4536:0:0:0,-37.9298,-408.404	0/1:10:6,4:6:216:4:136:-9.56524,0,-16.7802	0/1:40:28,12:28:1004:12:428:-26.8176,0,-78.6347	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:244:244,0:244:8753:0:0:0,-73.4513,-787.755	0/0:163:161,1:161:5788:1:36:0,-45.5284,-517.433	0/1:34:19,15:19:684:15:525:-37.343,0,-51.6553	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:123:73,50:73:2620:50:1760:-121.655,0,-199.01	0/0:43:42,1:42:1512:1:36:0,-9.34601,-132.776	0/1:195:136,59:136:4864:59:2100:-130.558,0,-379.213	0/1:43:22,21:22:792:21:752:-55.062,0,-58.6614	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/0:171:171,0:171:6132:0:0:0,-51.4761,-551.979	0/0:177:177,0:177:6360:0:0:0,-53.2823,-572.487	0/0:297:297,0:297:10651:0:0:0,-89.4059,-958.488	0/0:97:97,0:97:3476:0:0:0,-29.1999,-313.051	0/1:92:65,27:65:2336:27:958:-58.841,0,-182.804	0/0:177:177,0:177:6352:0:0:0,-53.2823,-571.769	0/0:21:21,0:21:741:0:0:0,-6.32163,-67.0116	0/1:161:100,61:100:3588:61:2147:-145.022,0,-274.66	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/1:145:92,53:92:3296:53:1895:-127.178,0,-253.21	0/1:68:31,37:31:1116:37:1323:-98.9013,0,-80.2817	0/1:8:6,2:6:212:2:72:-4.42848,0,-17.0166	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:114:114,0:114:4096:0:0:0,-34.3174,-368.824	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:255:255,0:255:9149:0:0:0,-76.7626,-823.378	0/0:224:224,0:224:8024:0:0:0,-67.4307,-722.177	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.401	0/0:133:133,0:133:4767:0:0:0,-40.037,-429.186	0/0:215:214,1:214:7656:1:36:0,-61.1232,-685.476	0/1:133:61,72:61:2192:72:2566:-191.153,0,-157.508	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/1:162:89,73:89:3188:73:2584:-184.043,0,-238.377	0/0:128:128,0:128:4584:0:0:0,-38.5318,-412.725	0/0:76:76,0:76:2707:0:0:0,-22.8783,-243.874	0/0:223:223,0:223:7967:0:0:0,-67.1297,-717.052	0/1:118:71,47:71:2540:47:1656:-113.804,0,-193.33	0/0:112:111,1:111:3980:1:36:0,-30.1171,-354.792	0/1:16:10,6:10:360:6:212:-14.6083,0,-27.9278	0/1:110:71,39:71:2552:39:1395:-92.735,0,-196.817	0/0:136:136,0:136:4872:0:0:0,-40.9401,-438.633	0/0:243:242,1:242:8667:1:36:0,-69.552,-776.424	0/0:74:74,0:74:2648:0:0:0,-22.2762,-238.567	0/1:92:46,46:46:1643:46:1644:-120.554,0,-120.463	0/1:56:33,23:33:1184:23:820:-57.2648,0,-90.0106	0/0:152:152,0:152:5452:0:0:0,-45.7566,-490.807	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.863	0/0:75:75,0:75:2677:0:0:0,-22.5772,-241.174	0/0:72:72,0:72:2580:0:0:0,-21.6742,-232.449	0/1:49:20,29:20:720:29:1029:-78.1727,0,-50.3783	0/1:71:45,26:45:1612:26:936:-63.1165,0,-123.997	0/1:98:30,68:30:1080:68:2420:-188.556,0,-68.0123	0/0:190:190,0:190:6815:0:0:0,-57.1957,-613.419	0/0:98:98,0:98:3516:0:0:0,-29.5009,-316.649
chr03	23646340	.	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chr03	23805973	.	A	G	75672.2	PASS	AB=0.520366;ABP=25.8303;AC=32;AF=0.170213;AN=188;AO=3343;CIGAR=1X;DP=22612;DPB=22612;DPRA=1.1326;EPP=7262.24;EPPR=41736.6;GTI=0;LEN=1;MEANALT=1.06;MQM=59.9824;MQMR=59.9648;NS=94;NUMALT=1;ODDS=10.9552;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118829;QR=688835;RO=19263;RPL=1770;RPP=28.219;RPPR=228.716;RPR=1573;RUN=1;SAF=1770;SAP=28.219;SAR=1573;SRF=10328;SRP=221.753;SRR=8935;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:132:60,72:60:2156:72:2558:-190.726,0,-154.571	0/0:352:352,0:352:12607:0:0:0,-105.963,-1133.09	0/1:283:140,143:140:5015:143:5110:-374.852,0,-366.304	0/0:526:524,2:524:18734:2:72:0,-151.505,-1678.79	0/0:99:99,0:99:3564:0:0:0,-29.802,-320.966	0/0:118:118,0:118:4236:0:0:0,-35.5215,-381.418	0/0:421:420,1:420:15018:1:36:0,-123.135,-1347.75	0/0:322:322,0:322:11519:0:0:0,-96.9317,-1036.58	0/0:222:221,0:221:7893:0:0:0,-66.5276,-710.186	0/1:249:130,119:130:4628:119:4272:-309.7,0,-341.725	0/0:114:114,0:114:4061:0:0:0,-34.3174,-365.677	0/0:216:216,0:216:7678:0:0:0,-65.0225,-691.059	0/0:186:186,0:186:6658:0:0:0,-55.9916,-599.296	0/0:162:162,0:162:5760:0:0:0,-48.7669,-518.515	0/0:197:197,0:197:7016:0:0:0,-59.3029,-631.505	0/1:129:53,76:53:1886:76:2719:-206.12,0,-131.184	0/1:133:58,75:58:2075:75:2653:-198.979,0,-146.983	0/0:109:109,0:109:3884:0:0:0,-32.8123,-349.754	0/1:59:28,31:28:1004:31:1080:-79.745,0,-71.5492	0/0:643:640,3:640:22895:3:108:0,-183.487,-2049.84	0/0:548:547,0:547:19544:0:0:0,-164.663,-1758.28	0/0:248:248,0:248:8892:0:0:0,-74.6554,-800.262	0/0:282:282,0:282:10090:0:0:0,-84.8905,-908.008	0/1:295:173,122:173:6196:122:4296:-298.014,0,-468.93	0/0:143:143,0:143:5127:0:0:0,-43.0473,-461.571	0/1:624:304,319:304:10827:319:11327:-831.415,0,-786.431	0/0:607:605,2:605:21620:2:72:0,-175.888,-1938.32	0/1:99:40,59:40:1427:59:2112:-160.547,0,-98.9248	0/0:741:740,1:740:26525:1:36:0,-219.465,-2381.44	0/0:358:342,16:342:12201:16:568:0,-56.3169,-1046.36	0/0:306:305,1:305:10865:1:36:0,-88.5169,-974.045	0/1:30:15,15:15:540:15:540:-39.9056,0,-39.9056	0/1:50:24,26:24:864:26:923:-68.3353,0,-63.0311	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:7:7,0:7:237:0:0:0,-2.10721,-21.6591	0/0:23:23,0:23:811:0:0:0,-6.92369,-73.31	0/0:418:417,1:417:14918:1:36:0,-122.232,-1337.3	0/0:300:298,1:298:10655:1:36:0,-86.6896,-955.338	0/1:145:82,63:82:2939:63:2246:-158.754,0,-221.094	0/0:18:18,0:18:640:0:0:0,-5.41854,-57.9293	0/1:451:222,229:222:7956:229:8128:-595.774,0,-578.936	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.955	0/1:322:155,167:155:5541:167:5975:-440.925,0,-401.882	0/1:199:110,89:110:3928:89:3172:-225.801,0,-293.806	0/0:128:128,0:128:4563:0:0:0,-38.5318,-410.837	0/0:333:331,2:331:11824:2:72:0,-93.4063,-1057.18	0/0:277:277,0:277:9902:0:0:0,-83.3853,-891.122	0/0:453:453,0:453:16215:0:0:0,-136.367,-1457.66	0/0:271:271,0:271:9736:0:0:0,-81.5791,-875.866	0/1:334:156,178:156:5604:178:6309:-467.359,0,-403.936	0/0:299:298,1:298:10669:1:36:0,-86.4097,-956.519	0/0:30:30,0:30:1063:0:0:0,-9.0309,-95.9808	0/1:343:178,165:178:6384:165:5858:-424.076,0,-471.394	0/0:138:138,0:138:4911:0:0:0,-41.5421,-442.141	0/1:23:16,7:16:576:7:248:-15.7405,0,-45.2513	0/1:296:160,136:160:5692:136:4775:-340.785,0,-423.293	0/1:184:94,90:94:3338:90:3199:-232.742,0,-245.246	0/1:19:5,14:5:180:14:495:-39.1635,0,-10.8325	0/1:31:17,14:17:608:14:500:-36.0042,0,-45.7201	0/0:273:273,0:273:9724:0:0:0,-82.1812,-875.111	0/0:215:215,0:215:7679:0:0:0,-64.7214,-691.144	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:417:417,0:417:14937:0:0:0,-125.53,-1344.06	0/0:342:336,6:336:12012:6:216:0,-83.1617,-1061.14	0/0:196:196,0:196:7032:0:0:0,-59.0019,-632.94	0/0:237:237,0:237:8466:0:0:0,-71.3441,-761.943	0/0:424:424,0:424:15194:0:0:0,-127.637,-1367.17	0/1:322:112,210:112:4024:210:7483:-576.582,0,-265.411	0/0:121:120,1:120:4300:1:36:0,-32.8264,-383.578	0/0:214:210,4:210:7506:4:140:0,-51.4758,-662.638	0/0:145:145,0:145:5173:0:0:0,-43.6493,-465.71	0/0:64:64,0:64:2300:0:0:0,-19.2659,-207.261	0/1:215:112,103:112:4020:103:3655:-264.432,0,-297.266	0/0:198:197,1:197:7063:1:36:0,-56.0057,-632.13	0/0:448:448,0:448:16005:0:0:0,-134.861,-1437.47	0/0:441:441,0:441:15787:0:0:0,-132.754,-1420.52	0/1:173:65,108:65:2328:108:3829:-292.727,0,-157.702	0/0:320:318,2:318:11408:2:72:0,-89.4929,-1019.76	0/1:22:8,14:8:288:14:500:-38.7135,0,-19.6447	0/1:317:150,167:150:5361:167:5948:-440.003,0,-387.149	0/0:408:408,0:408:14612:0:0:0,-122.82,-1314.63	0/0:557:557,0:557:19923:0:0:0,-167.674,-1791.8	0/0:187:187,0:187:6661:0:0:0,-56.2926,-599.568	0/1:156:67,89:67:2395:89:3184:-239.823,0,-168.846	0/1:183:86,97:86:3084:97:3440:-254.723,0,-222.699	0/0:329:329,0:329:11721:0:0:0,-99.0389,-1054.76	0/0:76:75,1:75:2688:1:36:0,-19.28,-237.204	0/0:168:167,1:167:5955:1:36:0,-46.9748,-532.458	0/0:172:172,0:172:6151:0:0:0,-51.7772,-553.689	0/1:101:55,46:55:1959:46:1644:-117.845,0,-146.181	0/1:236:115,120:115:4128:120:4214:-308.342,0,-300.601	0/1:179:46,133:46:1648:133:4757:-374.402,0,-93.7027	0/0:363:362,0:362:12984:0:0:0,-108.973,-1168.02	0/0:241:241,0:241:8580:0:0:0,-72.5482,-772.199
chr03	23806342	.	AAAGAAGGAGC	AAAGGAGC	20518.1	PASS	AB=0.448479;ABP=69.6892;AC=32;AF=0.170213;AN=188;AO=1307;CIGAR=1M3D7M;DP=8990;DPB=8630.55;DPRA=0.97106;EPP=2815.13;EPPR=16439;GTI=0;LEN=3;MEANALT=1.76471;MQM=59.4124;MQMR=59.992;NS=94;NUMALT=1;ODDS=5.04187;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46243;QR=268844;RO=7609;RPL=1304;RPP=2815.13;RPPR=16447.7;RPR=3;RUN=1;SAF=1307;SAP=2841.12;SAR=0;SRF=7608;SRP=16517.1;SRR=1;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:14,16:14:493:16:545:-40.34,0,-35.6726	0/0:158:158,0:158:5585:0:0:0,-47.5627,-502.783	0/1:95:50,45:50:1767:45:1600:-115.683,0,-130.713	0/0:226:221,0:221:7788:0:0:0,-66.5276,-700.616	0/0:53:53,0:53:1879:0:0:0,-15.9546,-169.389	0/0:46:46,0:46:1612:0:0:0,-13.8474,-145.368	0/0:82:82,0:82:2896:0:0:0,-24.6845,-260.879	0/0:144:141,0:141:4980:0:0:0,-42.4452,-447.998	0/0:98:96,2:96:3379:2:72:0,-22.6642,-297.495	0/1:112:53,59:53:1862:59:2095:-155.046,0,-134.146	0/0:76:76,0:76:2698:0:0:0,-22.8783,-243.067	0/0:92:92,0:92:3229:0:0:0,-27.6948,-290.836	0/0:76:76,0:76:2677:0:0:0,-22.8783,-241.177	0/0:80:80,0:80:2821:0:0:0,-24.0824,-254.134	0/0:55:55,0:55:1959:0:0:0,-16.5566,-176.587	0/1:57:34,23:34:1201:23:820:-56.9638,0,-91.2374	0/1:76:41,34:41:1460:34:1212:-86.5725,0,-108.905	0/0:64:63,0:63:2245:0:0:0,-18.9649,-201.956	0/1:42:27,14:27:961:14:489:-31.6166,0,-74.1072	0/0:69:69,0:69:2442:0:0:0,-20.7711,-220.038	0/0:101:101,0:101:3569:0:0:0,-30.404,-321.424	0/0:36:36,0:36:1283:0:0:0,-10.8371,-115.774	0/0:99:99,0:99:3495:0:0:0,-29.802,-314.765	0/1:175:86,88:86:3006:88:3083:-224.81,0,-218.038	0/0:47:46,0:46:1618:0:0:0,-13.8474,-145.549	0/1:351:194,157:194:6851:157:5504:-389.708,0,-511.013	0/0:127:125,0:125:4423:0:0:0,-37.6287,-397.889	0/1:36:22,13:22:779:13:456:-30.4549,0,-59.5375	0/0:145:143,0:143:5078:0:0:0,-43.0473,-456.811	0/0:201:190,8:190:6703:8:288:0,-33.6964,-577.094	0/0:99:99,0:99:3493:0:0:0,-29.802,-314.586	0/1:11:7,4:7:244:4:144:-10.0023,0,-18.988	0/1:30:16,14:16:570:14:481:-34.575,0,-42.6021	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:13:13,0:13:458:0:0:0,-3.91339,-41.5546	0/0:14:14,0:14:492:0:0:0,-4.21442,-44.6122	0/0:195:192,0:192:6792:0:0:0,-57.7978,-611.002	0/0:263:262,0:262:9256:0:0:0,-78.8699,-832.669	0/1:70:39,30:39:1370:30:1064:-74.9172,0,-102.467	0/0:7:7,0:7:240:0:0:0,-2.10721,-21.9349	0/1:159:99,58:99:3504:58:2057:-137.678,0,-267.957	0/0:54:54,0:54:1929:0:0:0,-16.2556,-173.887	0/1:160:78,80:78:2743:80:2821:-205.775,0,-199.194	0/1:64:28,35:28:992:35:1244:-92.9094,0,-70.273	0/0:77:77,0:77:2720:0:0:0,-23.1793,-245.045	0/0:73:72,0:72:2541:0:0:0,-21.6742,-228.583	0/0:135:135,0:135:4784:0:0:0,-40.639,-430.723	0/0:209:206,0:206:7256:0:0:0,-62.0122,-652.749	0/0:66:66,0:66:2343:0:0:0,-19.868,-211.131	0/1:121:78,43:78:2773:43:1519:-100.546,0,-213.389	0/0:125:124,0:124:4341:0:0:0,-37.3277,-390.518	0/0:21:20,0:20:717:0:0:0,-6.0206,-64.6412	0/1:240:151,86:151:5372:86:3031:-201.196,0,-411.95	0/0:8:8,0:8:280:0:0:0,-2.40824,-25.5394	0/1:38:15,23:15:524:23:824:-63.0442,0,-36.0508	0/1:93:54,39:54:1895:39:1376:-96.1172,0,-142.833	0/1:44:24,19:24:853:19:680:-48.345,0,-63.9305	0/1:18:4,14:4:144:14:500:-39.9176,0,-7.89508	0/1:27:16,11:16:568:11:396:-27.8549,0,-43.3244	0/0:61:60,0:60:2115:0:0:0,-18.0618,-190.261	0/0:142:140,0:140:4939:0:0:0,-42.1442,-444.276	0/0:14:14,0:14:487:0:0:0,-4.21442,-44.1599	0/0:160:159,0:159:5653:0:0:0,-47.8638,-508.536	0/0:241:240,0:240:8494:0:0:0,-72.2472,-764.118	0/0:73:70,0:70:2482:0:0:0,-21.0721,-223.277	0/0:62:61,0:61:2167:0:0:0,-18.3628,-195.086	0/0:161:160,0:160:5663:0:0:0,-48.1648,-509.44	0/1:87:33,53:33:1178:53:1850:-140.653,0,-80.2259	0/0:19:18,0:18:626:0:0:0,-5.41854,-56.3056	0/0:100:99,0:99:3500:0:0:0,-29.802,-314.856	0/0:108:107,0:107:3797:0:0:0,-32.2102,-341.572	0/0:43:43,0:43:1530:0:0:0,-12.9443,-137.993	0/1:84:55,28:55:1946:28:1000:-65.0939,0,-150.201	0/0:81:81,0:81:2861:0:0:0,-24.3834,-257.731	0/0:152:150,0:150:5301:0:0:0,-45.1545,-476.875	0/0:209:206,0:206:7276:0:0:0,-62.0122,-654.547	0/1:160:84,75:84:2930:75:2664:-191.716,0,-215.717	0/0:113:112,0:112:3960:0:0:0,-33.7154,-356.239	0/1:15:3,12:3:105:12:428:-34.3434,0,-5.28064	0/1:110:55,54:55:1927:54:1928:-140.642,0,-140.574	0/0:43:43,0:43:1530:0:0:0,-12.9443,-137.994	0/0:232:232,0:232:8143:0:0:0,-69.839,-732.908	0/0:130:130,0:130:4626:0:0:0,-39.1339,-416.508	0/1:59:38,21:38:1321:21:744:-49.492,0,-101.428	0/1:85:59,24:59:2085:24:860:-52.2946,0,-162.577	0/0:128:128,0:128:4513:0:0:0,-38.5318,-406.345	0/0:30:30,0:30:1064:0:0:0,-9.0309,-96.0722	0/0:95:93,0:93:3284:0:0:0,-27.9958,-295.424	0/0:74:73,0:73:2579:0:0:0,-21.9752,-232.002	0/1:68:40,27:40:1428:27:964:-66.528,0,-108.292	0/1:124:57,65:57:2000:65:2316:-171.586,0,-143.215	0/1:51:17,33:17:604:33:1188:-91.7724,0,-39.2796	0/0:89:88,0:88:3115:0:0:0,-26.4906,-280.368	0/0:100:100,0:100:3538:0:0:0,-30.103,-318.634
chr03	23917904	.	A	C	18313.7	PASS	AB=0.443719;ABP=74.6272;AC=32;AF=0.170213;AN=188;AO=1163;CIGAR=1X;DP=9394;DPB=9394;DPRA=0.885553;EPP=2493.81;EPPR=17739.8;GTI=1;LEN=1;MEANALT=1.02778;MQM=59.5916;MQMR=59.984;NS=94;NUMALT=1;ODDS=10.6816;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41517;QR=294159;RO=8228;RPL=4;RPP=2493.81;RPPR=17739.8;RPR=1159;RUN=1;SAF=0;SAP=2528.43;SAR=1163;SRF=0;SRP=17869.9;SRR=8228;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:41:22,19:22:779:19:665:-47.7826,0,-58.0898	0/0:181:181,0:181:6457:0:0:0,-54.4864,-581.215	0/1:120:63,57:63:2245:57:2040:-147.723,0,-166.188	0/0:158:158,0:158:5655:0:0:0,-47.5627,-509.069	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:50:50,0:50:1776:0:0:0,-15.0515,-160.121	0/0:162:162,0:162:5793:0:0:0,-48.7669,-521.483	0/0:106:106,0:106:3792:0:0:0,-31.9092,-341.479	0/0:99:99,0:99:3537:0:0:0,-29.802,-318.519	0/1:110:57,53:57:2044:53:1900:-138.165,0,-151.118	0/0:66:66,0:66:2351:0:0:0,-19.868,-211.849	0/0:91:91,0:91:3226:0:0:0,-27.3937,-290.56	0/0:82:82,0:82:2914:0:0:0,-24.6845,-262.495	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/0:79:79,0:79:2817:0:0:0,-23.7814,-253.768	0/1:52:36,16:36:1292:16:563:-35.3456,0,-100.93	0/1:53:34,19:34:1216:19:665:-44.1685,0,-93.792	0/0:92:92,0:92:3269:0:0:0,-27.6948,-294.426	0/1:56:31,25:31:1108:25:881:-62.6123,0,-83.1733	0/0:240:240,0:240:8609:0:0:0,-72.2472,-774.801	0/0:147:147,0:147:5223:0:0:0,-44.2514,-470.21	0/0:157:157,0:157:5596:0:0:0,-47.2617,-503.763	0/0:104:104,0:104:3736:0:0:0,-31.3071,-336.437	0/1:132:87,45:87:3109:45:1616:-105.98,0,-240.3	0/0:90:90,0:90:3240:0:0:0,-27.0927,-291.82	0/1:390:198,192:198:7030:192:6872:-501.135,0,-515.362	0/0:195:195,0:195:6979:0:0:0,-58.7008,-628.174	0/1:21:10,11:10:356:11:396:-29.6611,0,-26.0596	0/0:241:240,1:240:8592:1:36:0,-68.95,-769.675	0/0:188:183,5:183:6536:5:180:0,-40.0416,-571.773	0/0:118:118,0:118:4206:0:0:0,-35.5215,-378.719	0/1:7:5,2:5:180:2:68:-4.3505,0,-14.4433	0/1:27:18,9:18:640:9:324:-21.378,0,-49.8015	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:225:225,0:225:8039:0:0:0,-67.7317,-723.531	0/0:189:187,1:187:6677:1:36:0,-53.3552,-597.179	0/1:68:44,24:44:1580:24:864:-57.5611,0,-122.022	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:107:69,38:69:2476:38:1353:-89.8582,0,-190.883	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/1:99:54,45:54:1940:45:1592:-113.587,0,-145.074	0/1:70:50,20:50:1777:20:716:-43.6897,0,-139.139	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/0:128:128,0:128:4575:0:0:0,-38.5318,-411.915	0/0:103:103,0:103:3704:0:0:0,-31.0061,-333.554	0/0:133:133,0:133:4739:0:0:0,-40.037,-426.668	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.855	0/1:114:54,60:54:1936:60:2142:-158.689,0,-140.199	0/0:111:110,1:110:3933:1:36:0,-29.8161,-350.563	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:142:66,76:66:2376:76:2715:-201.776,0,-171.351	0/0:80:80,0:80:2860:0:0:0,-24.0824,-257.638	0/1:18:10,8:10:356:8:288:-20.8489,0,-26.9627	0/1:98:64,34:64:2284:34:1215:-80.141,0,-176.321	0/1:64:23,41:23:824:41:1468:-113.141,0,-55.2174	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	0/1:14:5,9:5:180:9:324:-25.2905,0,-12.3376	0/0:98:98,0:98:3516:0:0:0,-29.5009,-316.649	0/0:145:145,0:145:5164:0:0:0,-43.6493,-464.898	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:204:204,0:204:7315:0:0:0,-61.4101,-658.398	0/0:203:203,0:203:7248:0:0:0,-61.1091,-651.882	0/0:75:75,0:75:2654:0:0:0,-22.5772,-238.834	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.401	0/0:200:200,0:200:7161:0:0:0,-60.206,-644.544	0/1:102:35,67:35:1243:67:2391:-184.739,0,-81.4688	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:85:85,0:85:3036:0:0:0,-25.5875,-273.471	0/0:119:119,0:119:4255:0:0:0,-35.8226,-383.129	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:125:78,47:78:2788:47:1688:-114.339,0,-213.532	0/0:85:85,0:85:3060:0:0:0,-25.5875,-275.628	0/0:158:158,0:158:5640:0:0:0,-47.5627,-507.72	0/0:135:135,0:135:4848:0:0:0,-40.639,-436.472	0/1:64:43,21:43:1539:21:756:-49.1013,0,-119.536	0/0:86:85,0:85:3056:0:0:0,-25.5875,-275.057	0/1:24:14,10:14:496:10:360:-25.5172,0,-37.7495	0/1:100:53,47:53:1908:47:1669:-120.392,0,-141.895	0/0:117:117,0:117:4193:0:0:0,-35.2205,-377.549	0/0:243:243,0:243:8711:0:0:0,-73.1503,-783.979	0/0:114:114,0:114:4084:0:0:0,-34.3174,-367.746	0/1:84:55,29:55:1955:29:1015:-66.37,0,-150.938	0/1:76:51,25:51:1820:25:887:-57.2528,0,-141.203	0/0:176:175,0:175:6254:0:0:0,-52.6802,-562.595	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/0:103:103,0:103:3696:0:0:0,-31.0061,-332.842	0/0:92:92,0:92:3291:0:0:0,-27.6948,-296.409	0/1:46:24,22:24:851:22:788:-57.3866,0,-63.0621	0/1:88:54,34:54:1931:34:1216:-83.2513,0,-147.575	0/1:73:30,43:30:1072:43:1540:-116.918,0,-74.8173	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/0:115:115,0:115:4076:0:0:0,-34.6184,-367.025
chr03	23917933	.	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chr03	24020155	.	C	T	226229	PASS	AB=0.496256;ABP=3.49815;AC=157;AF=0.835106;AN=188;AO=10299;CIGAR=1X;DP=12348;DPB=12348;DPRA=0;EPP=22219.6;EPPR=4383.02;GTI=0;LEN=1;MEANALT=1.08511;MQM=59.9573;MQMR=59.9701;NS=94;NUMALT=1;ODDS=5.74163;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=368235;QR=72742;RO=2041;RPL=18;RPP=22210.9;RPPR=4383.02;RPR=10281;RUN=1;SAF=1;SAP=22358.3;SAR=10298;SRF=0;SRP=4434.99;SRR=2041;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:98:46,52:46:1631:52:1864:-138.538,0,-117.577	1/1:296:1,295:1:36:295:10558:-946.428,-85.5066,0	0/1:245:132,113:132:4731:113:4030:-289.136,0,-352.195	1/1:290:2,288:2:72:288:10340:-923.637,-80.462,0	1/1:95:0,95:0:0:95:3383:-304.675,-28.5979,0	1/1:86:1,85:1:36:85:3048:-270.951,-22.2903,0	1/1:201:0,201:0:0:201:7191:-647.215,-60.507,0	1/1:180:0,180:0:0:180:6429:-578.071,-54.1854,0	1/1:135:0,135:0:0:135:4832:-435.033,-40.6391,0	0/1:113:35,77:35:1230:77:2745:-213.217,0,-76.9275	1/1:125:0,125:0:0:125:4450:-400.67,-37.6288,0	1/1:107:0,107:0:0:107:3794:-341.657,-32.2102,0	1/1:103:0,103:0:0:103:3667:-330.235,-31.0061,0	1/1:167:0,167:0:0:167:5966:-536.959,-50.272,0	1/1:76:0,76:0:0:76:2703:-243.512,-22.8783,0	0/1:88:37,51:37:1296:51:1836:-139.03,0,-90.4477	0/1:126:61,65:61:2156:65:2315:-170.68,0,-156.375	1/1:94:0,94:0:0:94:3355:-302.166,-28.2968,0	0/1:85:38,47:38:1368:47:1659:-124.009,0,-97.8333	1/1:232:0,231:0:0:231:8281:-744.937,-69.5379,0	1/1:203:1,202:1:36:202:7256:-649.489,-57.5108,0	1/1:127:1,126:1:36:126:4504:-401.633,-34.6325,0	1/1:144:0,144:0:0:144:5172:-465.618,-43.3483,0	0/1:179:86,93:86:3054:93:3340:-246.932,0,-221.205	1/1:111:0,111:0:0:111:3954:-356.05,-33.4143,0	0/1:370:198,171:198:7072:171:6101:-437.753,0,-525.1	1/1:263:1,262:1:36:262:9341:-837.054,-75.5726,0	0/1:37:16,21:16:552:21:756:-57.2291,0,-38.8648	1/1:279:0,279:0:0:279:9997:-899.664,-83.9874,0	1/1:152:1,151:1:36:151:5404:-482.891,-42.1583,0	1/1:128:0,128:0:0:128:4590:-413.263,-38.5318,0	0/1:4:2,2:2:68:2:72:-5.6326,0,-5.25359	0/1:28:12,16:12:428:16:576:-43.7461,0,-30.43	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:221:0,221:0:0:221:7905:-711.473,-66.5276,0	1/1:167:5,162:5:180:162:5803:-505.83,-33.7199,0	0/1:177:86,91:86:3060:91:3238:-238.359,0,-222.345	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:313:105,208:105:3752:208:7439:-575.331,0,-243.658	1/1:81:0,81:0:0:81:2889:-260.245,-24.3834,0	0/1:208:116,91:116:4147:91:3241:-228.381,0,-310.74	0/1:130:66,64:66:2372:64:2292:-167.407,0,-174.604	1/1:67:0,67:0:0:67:2395:-215.316,-20.169,0	1/1:93:0,93:0:0:93:3336:-300.457,-27.9958,0	1/1:112:0,112:0:0:112:3984:-358.75,-33.7154,0	1/1:207:0,207:0:0:207:7399:-665.956,-62.3132,0	1/1:163:0,163:0:0:163:5868:-528.227,-49.0679,0	0/1:144:65,79:65:2328:79:2828:-211.411,0,-166.432	1/1:166:2,164:2:72:164:5879:-522.383,-43.1347,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:149:58,90:58:2067:90:3219:-245.02,0,-141.388	1/1:79:0,79:0:0:79:2819:-253.949,-23.7814,0	0/1:46:28,18:28:985:18:648:-44.8045,0,-75.1141	0/1:178:95,83:95:3383:83:2950:-212.149,0,-251.103	1/1:100:1,99:1:36:99:3506:-312.15,-26.5047,0	0/1:5:3,2:3:104:2:72:-5.33157,0,-8.19766	0/1:44:27,17:27:968:17:612:-42.1681,0,-74.192	1/1:161:0,161:0:0:161:5759:-518.423,-48.4658,0	1/1:187:2,185:2:72:185:6610:-588.115,-49.4559,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:123:1,122:1:36:122:4329:-384.999,-33.4284,0	1/1:195:0,195:0:0:195:6987:-628.892,-58.7009,0	1/1:95:0,95:0:0:95:3383:-304.685,-28.5979,0	1/1:82:0,82:0:0:82:2929:-263.844,-24.6845,0	1/1:199:3,196:3:108:196:7027:-622.414,-49.8298,0	0/1:207:149,58:149:5339:58:2084:-125.517,0,-418.329	1/1:85:0,85:0:0:85:3030:-272.931,-25.5876,0	1/1:110:1,109:1:36:109:3855:-343.547,-29.515,0	1/1:115:1,114:1:36:114:4055:-361.538,-31.0202,0	1/1:47:0,47:0:0:47:1669:-150.495,-14.1484,0	0/1:122:62,60:62:2216:60:2148:-156.862,0,-162.979	1/1:115:0,115:0:0:115:4103:-369.455,-34.6185,0	1/1:328:0,328:0:0:328:11713:-1054.03,-98.7378,0	1/1:143:1,142:1:36:142:5088:-454.453,-39.449,0	0/1:104:61,43:61:2175:43:1537:-107.269,0,-164.709	1/1:108:0,108:0:0:108:3880:-349.393,-32.5112,0	0/1:24:14,10:14:504:10:360:-25.5196,0,-38.4734	0/1:115:60,55:60:2127:55:1970:-142.956,0,-157.08	1/1:109:0,109:0:0:109:3905:-351.641,-32.8123,0	1/1:147:0,147:0:0:147:5249:-472.547,-44.2514,0	1/1:157:3,154:3:104:154:5508:-487.175,-38.5922,0	0/1:80:43,37:43:1544:37:1313:-94.3873,0,-115.171	0/1:109:45,64:45:1607:64:2291:-173.638,0,-112.107	1/1:177:0,176:0:0:176:6308:-567.452,-52.9813,0	1/1:71:0,71:0:0:71:2548:-229.57,-21.3731,0	1/1:99:0,99:0:0:99:3552:-319.888,-29.802,0	1/1:83:0,83:0:0:83:2972:-267.713,-24.9855,0	0/1:157:84,73:84:2979:73:2611:-187.976,0,-221.082	0/1:216:106,110:106:3747:110:3947:-290.393,0,-272.409	0/1:105:77,27:77:2748:27:968:-55.7705,0,-215.896	1/1:143:0,143:0:0:143:5109:-459.95,-43.0473,0	1/1:137:0,136:0:0:136:4883:-439.261,-40.9401,0
chr03	24034698	.	TATG	GATT,AATT	218112	PASS	AB=0.493472,0.504854;ABP=4.11603,3.62169;AC=157,31;AF=0.835106,0.164894;AN=188;AO=8683,1529;CIGAR=1X2M1X,1X2M1X;DP=10233;DPB=10235;DPRA=0,1.00096;EPP=18857.9,3323.19;EPPR=0;GTI=1;LEN=4,4;MEANALT=1.62766,2.20513;MQM=59.9735,59.9778;MQMR=0;NS=94;NUMALT=2;ODDS=0.87673;PAIRED=0,0;PAIREDR=0;PAO=5,3;PQA=172,36;PQR=0;PRO=0;QA=302367,53468;QR=0;RO=0;RPL=8683,1529;RPP=18857.9,3323.19;RPPR=0;RPR=0,0;RUN=1,1;SAF=8683,1529;SAP=18857.9,3323.19;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:83:0,46,36:0:0:46,36:1609,1256:-233.165,-102.262,-88.4151,-131.008,0,-120.171	1/1:138:0,138,0:0:0:138,0:4763,0:-428.838,-41.5421,0,-428.838,-41.5421,-428.838	1/2:230:0,124,106:0:0:124,106:4306,3717:-652.748,-302.699,-265.371,-350.397,0,-318.488	1/1:224:0,224,0:0:0:224,0:7773,0:-699.631,-67.4307,0,-699.631,-67.4307,-699.631	1/1:76:0,75,0:0:0:75,0:2583,0:-232.37,-22.5773,0,-232.37,-22.5773,-232.37	1/1:29:0,29,0:0:0:29,0:1019,0:-92.0217,-8.72987,0,-92.0217,-8.72987,-92.0217	1/1:74:0,73,1:0:0:73,1:2515,36:-226.244,-21.9752,0,-223.306,-18.6779,-223.005	1/1:101:0,101,0:0:0:101,0:3494,0:-314.679,-30.404,0,-314.679,-30.404,-314.679	1/1:148:0,145,3:0:0:145,3:5015,104:-451.166,-43.6494,0,-442.712,-34.8495,-441.809	1/2:109:0,55,54:0:0:55,54:1904,1863:-306.424,-151.691,-135.134,-155.079,0,-138.823	1/1:36:0,36,0:0:0:36,0:1248,0:-112.432,-10.8371,0,-112.432,-10.8371,-112.432	1/1:114:0,114,0:0:0:114,0:3904,0:-351.566,-34.3174,0,-351.566,-34.3174,-351.566	1/1:97:0,97,0:0:0:97,0:3405,0:-306.67,-29.1999,0,-306.67,-29.1999,-306.67	1/1:45:0,45,0:0:0:45,0:1523,0:-137.357,-13.5464,0,-137.357,-13.5464,-137.357	1/1:84:0,84,0:0:0:84,0:2944,0:-265.196,-25.2865,0,-265.196,-25.2865,-265.196	1/2:82:0,33,48:0:0:33,48:1169,1707:-234.376,-139.146,-129.212,-95.2632,0,-80.8137	1/2:31:0,16,15:0:0:16,15:558,521:-88.0849,-42.7012,-37.8847,-45.7316,0,-41.2162	1/1:34:0,34,0:0:0:34,0:1191,0:-107.495,-10.235,0,-107.495,-10.235,-107.495	1/2:27:0,15,12:0:0:15,12:535,431:-79.1297,-35.5183,-31.0029,-43.9693,0,-40.3569	1/1:305:0,305,0:0:0:305,0:10644,0:-957.908,-91.8142,0,-957.908,-91.8142,-957.908	1/1:196:0,195,0:0:0:195,0:6742,0:-606.576,-58.7009,0,-606.576,-58.7009,-606.576	1/1:139:0,139,0:0:0:139,0:4875,0:-438.914,-41.8432,0,-438.914,-41.8432,-438.914	1/1:173:0,173,0:0:0:173,0:6051,0:-544.707,-52.0782,0,-544.707,-52.0782,-544.707	1/2:114:0,54,60:0:0:54,60:1878,2102:-324.08,-171.388,-155.133,-153.04,0,-134.978	1/1:114:0,114,0:0:0:114,0:3995,0:-359.739,-34.3174,0,-359.739,-34.3174,-359.739	1/2:244:0,133,111:0:0:133,111:4646,3851:-691.302,-313.377,-273.34,-378.273,0,-344.859	1/1:317:0,316,0:0:0:316,0:11072,0:-996.169,-95.1255,0,-996.169,-95.1255,-996.169	1/2:39:0,19,20:0:0:19,20:664,703:-111.587,-57.5737,-51.8541,-54.3635,0,-48.3429	1/1:319:0,316,1:0:0:316,1:10983,36:-988.076,-95.1255,0,-985.138,-92.1748,-984.837	1/1:185:0,176,8:0:0:176,8:6171,283:-555.155,-52.9813,0,-532.104,-29.8828,-529.695	1/1:140:0,140,0:0:0:140,0:4834,0:-435.224,-42.1442,0,-435.224,-42.1442,-435.224	1/2:6:0,4,2:0:0:4,2:144,72:-17.9843,-6.23466,-5.03054,-12.1095,0,-11.5074	1/2:21:0,14,7:0:0:14,7:490,244:-60.0594,-20.1916,-15.9772,-40.2167,0,-38.1094	1/1:4:0,4,0:0:0:4,0:143,0:-13.2214,-1.20412,0,-13.2214,-1.20412,-13.2214	1/1:19:0,19,0:0:0:19,0:653,0:-59.0898,-5.71957,0,-59.0898,-5.71957,-59.0898	1/1:31:0,31,0:0:0:31,0:1073,0:-96.8777,-9.33193,0,-96.8777,-9.33193,-96.8777	1/1:155:0,153,0:0:0:153,0:5370,0:-483.117,-46.0576,0,-483.117,-46.0576,-483.117	1/1:214:0,213,0:0:0:213,0:7482,0:-673.08,-64.1194,0,-673.08,-64.1194,-673.08	1/2:46:0,19,27:0:0:19,27:667,951:-132.063,-77.7777,-72.0581,-54.6364,0,-46.5085	1/1:5:0,5,0:0:0:5,0:164,0:-15.0836,-1.50515,0,-15.0836,-1.50515,-15.0836	1/2:126:0,70,56:0:0:70,56:2431,1961:-357.534,-159.908,-138.836,-197.975,0,-181.117	1/1:36:0,36,0:0:0:36,0:1259,0:-113.613,-10.8371,0,-113.613,-10.8371,-113.613	1/2:208:0,129,78:0:0:129,78:4455,2724:-583.629,-221.675,-182.842,-362.05,0,-338.57	1/2:69:0,36,33:0:0:36,33:1246,1159:-195.938,-94.6828,-83.8458,-101.604,0,-91.6696	1/1:60:0,60,0:0:0:60,0:2101,0:-189.36,-18.0618,0,-189.36,-18.0618,-189.36	1/1:173:0,173,0:0:0:173,0:5971,0:-537.474,-52.0782,0,-537.474,-52.0782,-537.474	1/1:146:0,145,0:0:0:145,0:5082,0:-457.253,-43.6494,0,-457.253,-43.6494,-457.253	1/1:291:0,291,0:0:0:291,0:10164,0:-914.723,-87.5997,0,-914.723,-87.5997,-914.723	1/1:82:0,81,1:0:0:81,1:2829,36:-254.512,-24.3834,0,-251.575,-21.4261,-251.274	1/2:248:0,120,128:0:0:120,128:4201,4503:-708.719,-366.915,-330.791,-342.155,0,-303.624	1/1:149:0,148,1:0:0:148,1:5097,35:-458.542,-44.5524,0,-455.694,-41.3548,-455.393	1/1:7:0,7,0:0:0:7,0:250,0:-22.8468,-2.10721,0,-22.8468,-2.10721,-22.8468	1/2:144:0,61,83:0:0:61,83:2104,2902:-407.353,-236.433,-218.07,-171.267,0,-146.281	1/1:116:0,116,0:0:0:116,0:4058,0:-365.414,-34.9195,0,-365.414,-34.9195,-365.414	1/2:13:0,5,8:0:0:5,8:173,284:-37.5504,-23.4953,-21.9901,-14.4044,0,-11.9962	1/2:172:0,93,78:0:0:93,78:3229,2694:-481.422,-218.927,-190.932,-262.54,0,-239.06	1/1:64:0,64,0:0:0:64,0:22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chr03	24185052	.	T	A	25115.6	PASS	AB=0.465502;ABP=37.3201;AC=31;AF=0.164894;AN=188;AO=1565;CIGAR=1X;DP=12210;DPB=12210;DPRA=1.03472;EPP=3401.36;EPPR=23105.3;GTI=1;LEN=1;MEANALT=1.02326;MQM=59.9827;MQMR=59.9897;NS=94;NUMALT=1;ODDS=2.53911;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56009;QR=380447;RO=10639;RPL=0;RPP=3401.36;RPPR=23105.3;RPR=1565;RUN=1;SAF=1565;SAP=3401.36;SAR=0;SRF=10639;SRP=23105.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:22,23:22:792:23:828:-61.2978,0,-58.0593	0/0:208:207,0:207:7423:0:0:0,-62.3132,-667.753	0/1:183:106,77:106:3764:77:2753:-192.922,0,-283.871	0/0:321:321,0:321:11488:0:0:0,-96.6306,-1033.8	0/0:112:112,0:112:3999:0:0:0,-33.7154,-360.1	0/0:51:51,0:51:1836:0:0:0,-15.3525,-165.521	0/0:176:174,0:174:6228:0:0:0,-52.3792,-560.256	0/0:288:288,0:288:10277:0:0:0,-86.6966,-924.859	0/0:98:98,0:98:3516:0:0:0,-29.5009,-316.649	0/1:148:85,63:85:3027:63:2245:-157.331,0,-228.109	0/0:71:71,0:71:2530:0:0:0,-21.3731,-227.951	0/0:67:67,0:67:2387:0:0:0,-20.169,-215.087	0/0:78:78,0:78:2783:0:0:0,-23.4803,-250.711	0/0:62:62,0:62:2215:0:0:0,-18.6639,-199.614	0/0:80:80,0:80:2880:0:0:0,-24.0824,-259.436	0/1:59:26,33:26:936:33:1188:-89.4678,0,-66.7987	0/1:74:37,37:37:1320:37:1328:-97.546,0,-96.8257	0/0:61:61,0:61:2180:0:0:0,-18.3628,-196.466	0/1:57:33,24:33:1188:24:864:-60.9239,0,-90.0699	0/0:396:396,0:396:14162:0:0:0,-119.208,-1274.34	0/0:281:281,0:281:10067:0:0:0,-84.5894,-905.963	0/0:178:178,0:178:6366:0:0:0,-53.5833,-573.029	0/0:93:93,0:93:3323:0:0:0,-27.9958,-299.288	0/1:195:108,87:108:3867:87:3132:-223.404,0,-289.524	0/0:97:97,0:97:3468:0:0:0,-29.1999,-312.332	0/1:430:239,191:239:8559:191:6811:-483.614,0,-640.864	0/0:306:306,0:306:10906:0:0:0,-92.1152,-981.44	0/1:32:16,16:16:576:16:576:-42.542,0,-42.542	0/0:448:448,0:448:15962:0:0:0,-134.861,-1436.27	0/0:145:143,2:143:5112:2:57:0,-38.236,-454.808	0/0:100:100,0:100:3567:0:0:0,-30.103,-321.238	0/1:11:6,5:6:216:5:176:-12.8737,0,-16.4792	0/1:13:5,8:5:180:8:288:-22.354,0,-12.6387	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:187:185,1:185:6636:1:36:0,-52.7531,-593.716	0/0:277:274,3:274:9840:3:100:0,-74.0549,-876.209	0/1:87:48,39:48:1724:39:1404:-100.47,0,-129.256	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:194:115,79:115:4100:79:2821:-195.728,0,-310.785	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/1:196:98,98:98:3511:98:3512:-257.288,0,-257.197	0/1:95:48,47:48:1706:47:1688:-123.609,0,-125.227	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.459	0/0:164:164,0:164:5859:0:0:0,-49.3689,-527.421	0/0:207:206,1:206:7384:1:36:0,-58.7149,-661.008	0/0:235:234,0:234:8400:0:0:0,-70.441,-755.641	0/0:176:176,0:176:6283:0:0:0,-52.9813,-565.565	0/1:198:105,93:105:3756:93:3336:-240.853,0,-278.209	0/0:267:267,0:267:9555:0:0:0,-80.375,-859.906	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:180:103,77:103:3675:77:2738:-192.474,0,-276.768	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/1:18:13,5:13:468:5:180:-11.1335,0,-37.0411	0/1:208:119,89:119:4232:89:3192:-224.889,0,-318.446	0/0:58:58,0:58:2068:0:0:0,-17.4597,-186.391	0/1:16:5,11:5:176:11:392:-30.8036,0,-11.3685	0/1:29:16,13:16:568:13:464:-33.3676,0,-42.722	0/0:95:95,0:95:3408:0:0:0,-28.5978,-306.934	0/0:110:108,2:108:3875:2:68:0,-26.6556,-342.486	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:237:236,1:236:8423:1:36:0,-67.7458,-754.476	0/0:299:297,2:297:10644:2:72:0,-83.1712,-950.255	0/0:93:93,0:93:3323:0:0:0,-27.9958,-299.288	0/0:143:143,0:143:5101:0:0:0,-43.0473,-459.234	0/0:205:202,3:202:7234:3:108:0,-51.636,-641.025	0/1:127:48,79:48:1724:79:2825:-216.256,0,-117.215	0/0:38:38,0:38:1355:0:0:0,-11.4391,-122.25	0/0:121:121,0:121:4332:0:0:0,-36.4246,-390.056	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.834	0/0:18:18,0:18:640:0:0:0,-5.41854,-57.9293	0/1:128:57,71:57:2032:71:2552:-191.398,0,-144.621	0/0:73:72,1:72:2588:1:36:0,-18.3769,-229.57	0/0:183:183,0:183:6539:0:0:0,-55.0885,-588.594	0/0:291:291,0:291:10409:0:0:0,-87.5997,-936.729	0/1:86:52,34:52:1859:34:1224:-84.5785,0,-141.7	0/0:157:155,2:155:5560:2:72:0,-40.425,-493.686	0/1:17:8,9:8:288:9:320:-24.0248,0,-21.1499	0/1:151:85,66:85:3043:66:2349:-166.212,0,-228.644	0/0:167:167,0:167:5952:0:0:0,-50.272,-535.788	0/0:341:340,1:340:12110:1:36:0,-99.0529,-1086.16	0/0:116:116,0:116:4133:0:0:0,-34.9195,-372.154	0/1:61:30,31:30:1060:31:1116:-82.3889,0,-77.3484	0/1:101:50,51:50:1800:51:1836:-135.117,0,-131.874	0/0:132:131,1:131:4699:1:36:0,-36.1377,-419.47	0/0:52:52,0:52:1860:0:0:0,-15.6536,-167.68	0/0:84:84,0:84:3007:0:0:0,-25.2865,-270.861	0/0:79:78,0:78:2782:0:0:0,-23.4803,-250.26	0/1:42:28,14:28:1008:14:504:-33.0548,0,-78.3931	0/1:70:43,27:43:1536:27:968:-66.3653,0,-117.461	0/1:68:20,48:20:712:48:1706:-133.356,0,-43.9366	0/0:199:199,0:199:7132:0:0:0,-59.905,-641.937	0/0:96:96,0:96:3418:0:0:0,-28.8989,-307.834
chr03	24185057	.	T	A	237696	PASS	AB=0.537833;ABP=44.0869;AC=157;AF=0.835106;AN=188;AO=10741;CIGAR=1X;DP=12289;DPB=12289;DPRA=0;EPP=23257.4;EPPR=3334.07;GTI=1;LEN=1;MEANALT=1.06383;MQM=59.9912;MQMR=59.9825;NS=94;NUMALT=1;ODDS=1.51275;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=383528;QR=55101;RO=1542;RPL=8;RPP=23257.4;RPPR=3334.07;RPR=10733;RUN=1;SAF=10741;SAP=23326.8;SAR=0;SRF=1542;SRP=3351.42;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:23,22:23:801:22:788:-57.6984,0,-58.8604	1/1:209:0,209:0:0:209:7461:-671.532,-62.9153,0	0/1:181:75,106:75:2680:106:3771:-285.102,0,-186.959	1/1:330:0,330:0:0:330:11765:-1058.71,-99.3399,0	1/1:113:0,113:0:0:113:4060:-365.586,-34.0164,0	1/1:52:0,52:0:0:52:1842:-166.056,-15.6536,0	1/1:179:0,179:0:0:179:6360:-572.488,-53.8844,0	1/1:290:0,290:0:0:290:10374:-933.578,-87.2987,0	1/1:100:0,100:0:0:100:3588:-323.126,-30.103,0	0/1:148:62,86:62:2220:86:3078:-232.695,0,-155.084	1/1:74:0,74:0:0:74:2637:-237.576,-22.2762,0	1/1:68:0,68:0:0:68:2444:-220.215,-20.47,0	1/1:78:0,78:0:0:78:2789:-251.25,-23.4803,0	1/1:64:0,64:0:0:64:2296:-206.901,-19.2659,0	1/1:79:0,79:0:0:79:2817:-253.768,-23.7814,0	0/1:58:32,26:32:1152:26:936:-67.0997,0,-86.5304	0/1:72:36,36:36:1292:36:1296:-95.2698,0,-94.9096	1/1:60:0,60:0:0:60:2160:-194.667,-18.0618,0	0/1:55:23,32:23:824:32:1152:-87.4335,0,-57.9267	1/1:398:0,397:0:0:397:14181:-1275.69,-119.509,0	1/1:283:0,283:0:0:283:10081:-907.223,-85.1915,0	1/1:179:0,179:0:0:179:6391:-575.276,-53.8844,0	1/1:96:0,96:0:0:96:3379:-304.324,-28.8989,0	0/1:194:84,110:84:3000:110:3914:-294.052,0,-211.832	1/1:95:0,95:0:0:95:3389:-305.224,-28.5979,0	0/1:425:188,237:188:6752:237:8461:-633.553,0,-479.813	1/1:312:0,312:0:0:312:11076:-996.731,-93.9214,0	0/1:32:16,16:16:572:16:576:-42.542,0,-42.1805	1/1:451:0,451:0:0:451:16106:-1449.22,-135.765,0	1/1:146:1,145:1:36:145:5193:-463.909,-40.3521,0	1/1:100:0,100:0:0:100:3592:-323.486,-30.103,0	0/1:12:5,7:5:180:7:237:-18.0467,0,-12.9397	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	1/1:7:0,7:0:0:7:237:-21.6591,-2.10721,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:190:1,189:1:32:189:6775:-606.619,-53.9964,0	1/1:281:3,278:3:104:278:9928:-883.753,-74.8866,0	0/1:87:40,47:40:1432:47:1673:-124.666,0,-102.988	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:192:78,114:78:2785:114:4058:-307.608,0,-193.091	1/1:58:0,57:0:0:57:2033:-182.881,-17.1587,0	0/1:195:96,99:96:3432:99:3545:-260.556,0,-250.393	0/1:96:47,49:47:1692:49:1745:-128.433,0,-123.668	1/1:58:0,58:0:0:58:2065:-186.114,-17.4597,0	1/1:164:0,164:0:0:164:5803:-522.383,-49.3689,0	1/1:209:0,209:0:0:209:7469:-672.251,-62.9153,0	1/1:237:0,237:0:0:237:8508:-765.716,-71.3441,0	1/1:178:0,177:0:0:177:6330:-569.578,-53.2823,0	0/1:197:92,105:92:3291:105:3723:-275.538,0,-237.106	1/1:271:0,271:0:0:271:9674:-870.607,-81.5791,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	0/1:179:78,101:78:2796:101:3620:-272.121,0,-197.996	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/1:18:5,13:5:180:13:453:-35.6811,0,-11.1335	0/1:206:89,117:89:3159:117:4183:-314.638,0,-222.524	1/1:57:0,57:0:0:57:2052:-184.951,-17.1587,0	0/1:17:12,5:12:424:5:180:-11.4346,0,-33.3789	0/1:29:13,16:13:438:16:572:-43.0836,0,-31.0097	1/1:93:0,93:0:0:93:3340:-300.816,-27.9958,0	1/1:111:2,108:2:68:108:3884:-343.288,-27.0088,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:242:0,242:0:0:242:8577:-771.928,-72.8493,0	1/1:303:2,301:2:72:301:10798:-964.881,-84.3754,0	1/1:94:0,94:0:0:94:3350:-301.714,-28.2968,0	1/1:145:0,145:0:0:145:5177:-466.07,-43.6494,0	1/1:204:3,201:3:108:201:7166:-634.912,-51.335,0	0/1:129:79,50:79:2820:50:1792:-122.73,0,-215.207	1/1:39:0,39:0:0:39:1404:-126.659,-11.7402,0	1/1:122:0,122:0:0:122:4374:-393.833,-36.7257,0	1/1:82:0,82:0:0:82:2933:-264.203,-24.6845,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:126:71,55:71:2527:55:1942:-137.123,0,-189.752	1/1:74:1,73:1:36:73:2586:-229.388,-18.6779,0	1/1:186:0,186:0:0:186:6632:-596.958,-55.9916,0	1/1:294:0,294:0:0:294:10517:-946.441,-88.5028,0	0/1:85:32,53:32:1144:53:1896:-145.331,0,-77.682	1/1:157:1,155:1:36:155:5549:-495.934,-43.7222,0	0/1:17:9,7:9:324:7:252:-17.8527,0,-24.3295	0/1:151:63,88:63:2228:88:3134:-236.828,0,-155.327	1/1:169:0,169:0:0:169:6017:-541.633,-50.8741,0	1/1:348:1,347:1:36:347:12357:-1108.37,-101.16,0	1/1:115:0,115:0:0:115:4126:-371.523,-34.6185,0	0/1:63:31,32:31:1116:32:1137:-83.6721,0,-81.7868	0/1:99:49,50:49:1756:50:1800:-132.476,0,-128.522	1/1:135:1,134:1:36:134:4781:-426.846,-37.0408,0	1/1:52:0,52:0:0:52:1867:-168.309,-15.6536,0	1/1:89:0,89:0:0:89:3170:-285.522,-26.7917,0	1/1:79:0,79:0:0:79:2840:-255.838,-23.7814,0	0/1:44:15,29:15:540:29:1044:-81.0295,0,-35.6912	0/1:70:27,43:27:972:43:1540:-117.821,0,-66.7258	0/1:68:47,21:47:1684:21:756:-47.8972,0,-131.377	1/1:202:0,202:0:0:202:7185:-646.704,-60.8081,0	1/1:97:0,97:0:0:97:3477:-313.14,-29.1999,0
chr03	24235657	.	AGTAGTCG	GGTAGTCG,GGTAG	383553	PASS	AB=0.482159,0.512351;ABP=12.0757,7.35523;AC=163,25;AF=0.867021,0.132979;AN=188;AO=12239,1721;CIGAR=1X7M,1X3M3D1M;DP=14049;DPB=13402.2;DPRA=0,0.78409;EPP=26562.3,3740.11;EPPR=13.8677;GTI=1;LEN=1,5;MEANALT=2.19149,2.65789;MQM=59.9883,48.9553;MQMR=60;NS=94;NUMALT=2;ODDS=3.0297;PAIRED=0,0;PAIREDR=0;PAO=6.5,0.5;PQA=208,18;PQR=0;PRO=0;QA=429769,60138;QR=150;RO=5;RPL=4808,1001;RPP=1223.7,102.639;RPPR=6.91895;RPR=7431,720;RUN=1,1;SAF=4808,1001;SAP=1223.7,102.639;SAR=7431,720;SRF=4;SRP=6.91895;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:54:0,47,7:0:0:47,7:1624,250:-151.631,-19.6775,-5.52907,-132.294,0,-130.187	1/1:107:0,107,0:0:0:107,0:3786,0:-340.939,-32.2102,0,-340.939,-32.2102,-340.939	1/2:87:0,74,12:0:0:74,12:2593,422:-242.451,-31.438,-9.1618,-211.021,0,-207.408	1/1:189:0,187,0:0:0:187,0:6563,0:-590.453,-56.2926,0,-590.453,-56.2926,-590.453	1/1:98:0,98,0:0:0:98,0:3437,0:-309.545,-29.5009,0,-309.545,-29.5009,-309.545	1/1:71:0,71,0:0:0:71,0:2484,0:-223.813,-21.3731,0,-223.813,-21.3731,-223.813	1/1:91:0,91,0:0:0:91,0:3196,0:-287.593,-27.3937,0,-287.593,-27.3937,-287.593	1/1:190:1,186,0:1:33:186,0:6563,0:-587.444,-53.3275,0,-587.745,-55.9916,-590.413	1/1:99:0,97,0:0:0:97,0:3397,0:-305.417,-29.1999,0,-305.417,-29.1999,-305.417	1/2:140:0,38,102:0:0:38,102:1333,3571:-394.193,-285.714,-274.274,-108.828,0,-78.123	1/1:191:0,190,0:0:0:190,0:6709,0:-603.531,-57.1957,0,-603.531,-57.1957,-603.531	1/1:88:1,87,0:1:21:87,0:3036,0:-271.37,-24.3907,0,-271.672,-26.1896,-273.259	1/1:102:0,102,0:0:0:102,0:3585,0:-322.858,-30.7051,0,-322.858,-30.7051,-322.858	1/1:132:0,132,0:0:0:132,0:4639,0:-417.676,-39.736,0,-417.676,-39.736,-417.676	1/1:131:0,129,0:0:0:129,0:4514,0:-406.073,-38.8329,0,-406.073,-38.8329,-406.073	1/2:116:0,46,69:0:0:46,69:1589,2383:-319.391,-190.289,-176.441,-129.087,0,-108.316	1/2:110:0,54,56:0:0:54,56:1914,1964:-306.638,-150.701,-134.446,-156.28,0,-139.423	1/1:89:0,87,2:0:0:87,2:3044,71:-273.851,-26.1896,0,-268.353,-20.3525,-267.751	1/2:60:0,33,27:0:0:33,27:1156,927:-165.165,-71.0883,-61.1543,-94.4124,0,-86.2846	1/1:167:1,165,0:1:30:165,0:5770,0:-516.416,-47.2764,0,-516.717,-49.67,-519.115	1/1:141:0,139,0:0:0:139,0:4891,0:-439.999,-41.8432,0,-439.999,-41.8432,-439.999	1/1:123:0,122,0:0:0:122,0:4290,0:-385.938,-36.7257,0,-385.938,-36.7257,-385.938	1/1:145:0,143,1:0:0:143,1:5060,36:-455.192,-43.0473,0,-452.324,-40.1833,-452.023	1/2:90:0,51,39:0:0:51,39:1800,1375:-255.993,-109.414,-94.0614,-146.927,0,-135.187	1/1:125:0,125,0:0:0:125,0:4409,0:-396.624,-37.6288,0,-396.624,-37.6288,-396.624	1/2:202:0,88,111:0:0:88,111:3109,3878:-565.628,-312.43,-285.939,-253.253,0,-219.838	1/1:227:1,224,0:1:33:224,0:7886,0:-706.497,-64.7525,0,-706.798,-67.4307,-709.466	1/2:87:0,36,50:0:0:36,50:1272,1739:-241.554,-137.956,-127.119,-103.598,0,-88.5461	1/1:235:0,235,0:0:0:235,0:8301,0:-747.107,-70.7421,0,-747.107,-70.7421,-747.107	1/1:108:0,103,5:0:0:103,5:3566,178:-320.825,-31.0061,0,-307.73,-17.586,-306.225	1/1:123:0,123,0:0:0:123,0:4304,0:-387.536,-37.0267,0,-387.536,-37.0267,-387.536	1/1:170:0,166,2:0:0:166,2:5844,66:-525.735,-49.971,0,-520.429,-44.6802,-519.826	1/1:210:0,200,8:0:0:200,8:7034,288:-632.783,-60.206,0,-609.283,-36.6547,-606.875	1/1:336:0,333,0:0:0:333,0:11630,0:-1046.23,-100.243,0,-1046.23,-100.243,-1046.23	1/1:514:0,512,0:0:0:512,0:17985,0:-1617.95,-154.127,0,-1617.95,-154.127,-1617.95	1/1:858:0,853,0:0:0:853,0:29967,0:-2695.86,-256.779,0,-2695.86,-256.779,-2695.86	1/1:409:0,405,0:0:0:405,0:14286,0:-1285.16,-121.917,0,-1285.16,-121.917,-1285.16	1/1:126:0,126,0:0:0:126,0:4412,0:-397.255,-37.9298,0,-397.255,-37.9298,-397.255	1/2:96:0,58,38:0:0:58,38:2015,1311:-264.985,-101.162,-83.7025,-164.158,0,-152.719	1/1:377:0,375,0:0:0:375,0:13187,0:-1186.29,-112.886,0,-1186.29,-112.886,-1186.29	1/2:203:0,109,93:0:0:109,93:3852,3268:-572.579,-258.863,-226.051,-313.734,0,-285.739	1/1:91:0,91,0:0:0:91,0:3200,0:-288.225,-27.3937,0,-288.225,-27.3937,-288.225	1/2:112:0,90,21:0:0:90,21:3181,741:-319.404,-60.3302,-33.2375,-259.181,0,-252.86	1/2:153:0,69,83:0:0:69,83:2422,2902:-429.071,-231.952,-211.181,-197.202,0,-172.217	1/1:124:0,124,0:0:0:124,0:4327,0:-389.61,-37.3277,0,-389.61,-37.3277,-389.61	1/1:87:0,86,0:0:0:86,0:2996,0:-269.51,-25.8886,0,-269.51,-25.8886,-269.51	1/1:139:0,133,0:0:0:133,0:4750,0:-427.308,-40.037,0,-427.308,-40.037,-427.308	1/1:190:0,187,1:0:0:187,1:6590,36:-592.854,-56.2926,0,-589.986,-53.414,-589.685	1/1:96:0,96,0:0:0:96,0:3370,0:-303.515,-28.8989,0,-303.515,-28.8989,-303.515	1/2:171:0,38,132:0:0:38,132:1325,4667:-480.509,-372.749,-361.31,-107.826,0,-68.0905	1/1:108:0,107,0:0:0:107,0:3734,0:-335.904,-32.2102,0,-335.904,-32.2102,-335.904	1/1:198:0,197,1:0:0:197,1:6888,36:-619.64,-59.3029,0,-616.702,-56.0057,-616.401	1/2:99:0,69,30:0:0:69,30:2452,1050:-280.954,-81.1293,-60.3582,-200.164,0,-191.134	1/1:66:0,65,0:0:0:65,0:2316,0:-208.341,-19.567,0,-208.341,-19.567,-208.341	1/2:70:0,57,13:0:0:57,13:2012,462:-198.508,-34.647,-17.4883,-164.192,0,-160.279	1/2:172:0,60,112:0:0:60,112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chr03	24395293	.	A	G	113529	PASS	AB=0.449859;ABP=64.8543;AC=144;AF=0.765957;AN=188;AO=5484;CIGAR=1X;DP=7212;DPB=7212;DPRA=15.4989;EPP=11911.4;EPPR=3746.63;GTI=2;LEN=1;MEANALT=1.03226;MQM=59.9686;MQMR=59.9762;NS=94;NUMALT=1;ODDS=0.368553;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=195471;QR=61797;RO=1724;RPL=5484;RPP=11911.4;RPPR=3746.63;RPR=0;RUN=1;SAF=0;SAP=11911.4;SAR=5484;SRF=0;SRP=3746.63;SRR=1724;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:89:65,24:65:2340:24:852:-50.2087,0,-184.067	1/1:72:2,70:2:72:70:2490:-216.065,-14.8374,0	0/1:124:74,50:74:2664:50:1757:-121.083,0,-202.677	1/1:99:5,94:5:180:94:3376:-287.503,-13.2499,0	1/1:43:2,41:2:72:41:1458:-124.679,-6.10757,0	0/1:66:9,57:9:324:57:2036:-163.454,0,-9.63787	1/1:49:3,46:3:104:46:1648:-138.906,-5.04766,0	1/1:124:6,118:6:216:118:4203:-358.662,-17.5372,0	1/1:102:7,95:7:252:95:3404:-283.545,-7.6761,0	0/1:68:32,36:32:1148:36:1280:-95.0332,0,-83.1598	1/1:86:7,79:7:252:79:2809:-230.02,-2.85962,0	1/1:112:5,107:5:180:107:3827:-328.074,-17.1633,0	1/1:112:6,106:6:216:106:3774:-320.069,-13.9248,0	1/1:73:4,69:4:144:69:2463:-208.61,-8.66157,0	1/1:84:5,79:5:180:79:2823:-237.757,-8.73446,0	0/1:70:38,32:38:1368:32:1136:-81.4768,0,-102.349	0/1:36:17,19:17:612:19:684:-51.0532,0,-44.5764	1/1:62:2,60:2:72:60:2148:-186.751,-11.8271,0	0/1:81:43,38:43:1540:38:1347:-97.146,0,-114.51	1/1:65:2,63:2:72:63:2238:-194.842,-12.7302,0	1/1:110:8,102:8:284:102:3617:-299.834,-7.20995,0	0/1:37:5,32:5:180:32:1148:-92.4917,0,-5.41395	1/1:87:4,83:4:136:83:2972:-255.137,-13.6141,0	0/1:38:17,21:17:604:21:752:-56.5671,0,-43.2515	1/1:70:1,69:1:36:69:2472:-219.135,-17.4738,0	0/1:148:69,79:69:2480:79:2816:-209.072,0,-178.901	1/1:176:7,168:7:252:168:6016:-518.516,-30.0111,0	0/1:51:31,20:31:1104:20:711:-48.9631,0,-84.3158	1/1:129:8,121:8:288:121:4311:-361.898,-12.5655,0	0/1:81:14,67:14:504:67:2370:-189.174,0,-21.3147	1/1:67:5,62:5:180:62:2208:-182.432,-3.61695,0	0/1:21:16,5:16:572:5:176:-9.86339,0,-45.4918	0/1:21:17,4:17:612:4:144:-6.99199,0,-49.0918	0/1:42:36,6:36:1296:6:195:-5.22649,0,-104.301	0/1:21:12,9:12:428:9:311:-22.0021,0,-32.5372	0/1:71:55,16:55:1955:16:576:-30.8019,0,-154.852	1/1:181:6,175:6:216:175:6245:-542.355,-34.6959,0	1/1:47:0,47:0:0:47:1668:-150.407,-14.1484,0	0/1:73:44,29:44:1576:29:1036:-71.5782,0,-120.156	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:65:31,34:31:1116:34:1212:-89.8194,0,-81.1847	1/1:52:2,50:2:72:50:1775:-153.196,-8.81684,0	0/1:110:79,31:79:2808:31:1104:-66.5573,0,-219.848	0/1:99:55,44:55:1980:44:1555:-110.439,0,-148.672	1/1:80:4,76:4:144:76:2706:-230.469,-10.7688,0	1/1:71:0,71:0:0:71:2544:-229.211,-21.3731,0	1/1:89:2,87:2:72:87:3095:-271.941,-19.9549,0	1/1:86:1,85:1:36:85:3036:-269.872,-22.2903,0	1/1:65:1,64:1:36:64:2292:-202.943,-15.9687,0	0/1:83:49,34:49:1752:34:1212:-84.4008,0,-132.979	1/1:34:0,34:0:0:34:1208:-109.026,-10.235,0	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	0/1:78:54,24:54:1940:24:860:-54.2415,0,-151.396	1/1:33:2,29:2:68:29:1035:-86.9956,-3.22408,0	0/1:24:20,4:20:720:4:144:-6.0889,0,-57.9041	0/1:110:77,33:77:2760:33:1180:-73.3947,0,-215.528	1/1:39:0,39:0:0:39:1404:-126.659,-11.7402,0	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:16:7,9:7:248:9:320:-24.3259,0,-17.8477	1/1:88:1,87:1:36:87:3110:-276.526,-22.8924,0	1/1:110:2,108:2:72:108:3884:-342.916,-26.2766,0	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	1/1:91:0,90:0:0:90:3212:-288.944,-27.0927,0	1/1:104:3,101:3:108:101:3604:-314.492,-21.232,0	1/1:49:1,48:1:36:48:1704:-150.048,-11.1522,0	0/1:60:10,50:10:352:50:1792:-143.501,0,-13.9564	1/1:126:3,123:3:108:123:4369:-383.31,-27.8546,0	0/1:86:60,26:60:2152:26:936:-58.6709,0,-168.059	0/1:97:16,81:16:576:81:2874:-229.697,0,-22.9751	1/1:41:1,40:1:36:40:1432:-125.579,-8.74396,0	1/1:72:1,71:1:36:71:2516:-223.092,-18.0759,0	0/1:28:4,24:4:144:24:860:-69.293,0,-4.88478	0/1:76:40,36:40:1440:36:1268:-91.4552,0,-107.019	1/1:93:4,89:4:140:89:3157:-271.409,-15.0512,0	1/1:171:6,165:6:216:165:5894:-510.78,-31.6856,0	1/1:44:2,42:2:72:42:1500:-128.458,-6.4086,0	0/1:59:42,17:42:1500:17:612:-37.6527,0,-117.533	1/1:96:6,90:6:216:90:3179:-266.546,-9.10837,0	0/1:54:41,13:41:1464:13:464:-25.8419,0,-115.8	0/1:77:49,28:49:1760:28:1000:-67.1361,0,-135.375	1/1:77:3,74:3:108:74:2643:-228.041,-13.1041,0	1/1:110:2,108:2:72:108:3868:-341.478,-26.2766,0	1/1:88:2,86:2:72:86:3058:-268.613,-19.6539,0	0/1:113:56,57:56:1990:57:2028:-148.776,0,-145.356	0/1:88:45,43:45:1620:43:1529:-111.409,0,-119.599	1/1:133:4,129:4:144:129:4584:-399.412,-26.7234,0	1/1:36:1,35:1:36:35:1256:-109.747,-7.23881,0	1/1:65:3,62:3:108:62:2206:-188.729,-9.49178,0	1/1:79:5,74:5:180:74:2644:-221.654,-7.22931,0	0/1:100:63,37:63:2252:37:1319:-88.9082,0,-172.84	0/1:150:82,68:82:2944:68:2397:-170.832,0,-219.994	0/1:88:66,22:66:2372:22:784:-44.3933,0,-187.247	1/1:74:0,74:0:0:74:2644:-238.207,-22.2762,0	1/1:129:4,125:4:144:125:4425:-385.108,-25.5193,0
chr03	24476744	.	C	T	454861	PASS	AB=0.458415;ABP=95.1173;AC=157;AF=0.835106;AN=188;AO=16572;CIGAR=1X;DP=19934;DPB=19934;DPRA=0;EPP=35980;EPPR=7288.3;GTI=0;LEN=1;MEANALT=1.06383;MQM=55.0666;MQMR=59.5502;NS=94;NUMALT=1;ODDS=9.53682;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=588098;QR=118667;RO=3355;RPL=6632;RPP=1436.88;RPPR=4.69376;RPR=9940;RUN=1;SAF=6631;SAP=1438.62;SAR=9941;SRF=1652;SRP=4.69376;SRR=1703;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:74:29,45:29:1022:45:1586:-119.62,0,-69.9553	1/1:324:0,324:0:0:324:11464:-1026.36,-97.5337,0	0/1:349:193,155:193:6820:155:5495:-386.322,0,-508.399	1/1:417:0,417:0:0:417:14826:-1331.32,-125.53,0	1/1:156:0,156:0:0:156:5554:-497.164,-46.9607,0	1/1:103:0,103:0:0:103:3645:-325.918,-31.0061,0	1/1:343:0,343:0:0:343:12161:-1092.44,-103.253,0	1/1:304:0,304:0:0:304:10774:-965.782,-91.5131,0	1/1:217:1,216:1:36:216:7655:-682.76,-61.7252,0	0/1:281:127,154:127:4498:154:5470:-407.489,0,-319.797	1/1:110:1,109:1:36:109:3881:-344.973,-29.515,0	1/1:157:1,156:1:36:156:5526:-491.468,-43.6725,0	1/1:154:0,154:0:0:154:5506:-493.048,-46.3586,0	1/1:165:1,164:1:36:164:5827:-520.337,-46.0717,0	1/1:157:0,157:0:0:157:5591:-502.069,-47.2617,0	0/1:114:60,54:60:2111:54:1916:-137.393,0,-155.93	0/1:141:68,73:68:2400:73:2547:-186.073,0,-173.79	1/1:146:0,146:0:0:146:5194:-464.208,-43.9504,0	0/1:121:64,57:64:2263:57:1997:-143.271,0,-167.496	1/1:507:1,506:1:36:506:18029:-1612.97,-149.024,0	1/1:379:0,379:0:0:379:13441:-1204.96,-114.09,0	1/1:184:1,183:1:36:183:6509:-581.514,-51.7912,0	1/1:111:1,110:1:36:110:3909:-347.464,-29.8161,0	0/1:253:109,144:109:3865:144:5089:-380.456,0,-271.869	1/1:164:0,164:0:0:164:5776:-516.823,-49.3689,0	0/1:669:383,286:383:13536:286:10129:-709.141,0,-1016.58	1/1:549:0,549:0:0:549:19481:-1743.88,-165.265,0	0/1:54:32,22:32:1100:22:773:-53.6025,0,-82.959	1/1:485:2,483:2:72:483:17121:-1530.15,-139.163,0	1/1:172:1,171:1:36:171:6073:-541.254,-48.1789,0	1/1:227:0,227:0:0:227:8032:-721.042,-68.3338,0	0/1:18:10,8:10:351:8:288:-20.8116,0,-26.5081	0/1:36:20,16:20:720:16:543:-38.2817,0,-54.2847	1/1:13:0,13:0:0:13:464:-41.4097,-3.91339,0	1/1:15:0,15:0:0:15:534:-48.2944,-4.51545,0	1/1:23:0,23:0:0:23:828:-74.5768,-6.92369,0	1/1:345:0,345:0:0:345:12225:-1098.39,-103.855,0	1/1:351:0,351:0:0:351:12396:-1111.38,-105.662,0	0/1:153:83,70:83:2923:70:2496:-178.317,0,-217.105	1/1:9:0,9:0:0:9:324:-29.4532,-2.70927,0	0/1:376:183,193:183:6486:193:6864:-502.688,0,-470.561	1/1:108:1,107:1:36:107:3775:-335.726,-28.913,0	0/1:446:259,187:259:9159:187:6628:-461.296,0,-689.741	0/1:129:67,62:67:2299:62:2181:-157.468,0,-168.329	1/1:131:0,131:0:0:131:4630:-415.378,-39.4349,0	1/1:266:1,265:1:36:265:9417:-842.542,-76.4757,0	1/1:280:0,280:0:0:280:9927:-889.186,-84.2884,0	1/1:415:0,415:0:0:415:14662:-1316.93,-124.927,0	1/1:264:1,263:1:27:263:9363:-837.638,-76.7723,0	0/1:348:199,149:199:7068:149:5316:-372.793,0,-531.338	1/1:401:0,401:0:0:401:14267:-1282.51,-120.713,0	1/1:58:0,58:0:0:58:2036:-182.931,-17.4597,0	0/1:309:204,105:204:7272:105:3756:-244.454,0,-561.482	1/1:98:0,98:0:0:98:3494:-314.365,-29.5009,0	0/1:16:7,9:7:252:9:309:-22.3144,0,-18.2125	0/1:281:148,132:148:5233:132:4649:-333.073,0,-385.892	1/1:117:0,117:0:0:117:4196:-376.117,-35.2205,0	0/1:29:13,16:13:460:16:563:-42.2564,0,-33.0055	0/1:41:15,26:15:540:26:899:-68.8012,0,-36.5943	1/1:215:1,214:1:36:214:7613:-679.352,-61.1232,0	1/1:210:0,210:0:0:210:7446:-669.323,-63.2163,0	1/1:10:0,10:0:0:10:352:-31.9591,-3.0103,0	1/1:246:2,244:2:72:244:8660:-771.514,-67.2167,0	1/1:403:1,402:1:36:402:14299:-1278.96,-117.717,0	1/1:356:0,356:0:0:356:12668:-1136.55,-107.167,0	1/1:194:0,194:0:0:194:6908:-620.076,-58.3998,0	1/1:326:8,318:8:284:318:11283:-987.101,-72.2367,0	0/1:306:219,87:219:7759:87:3104:-187.39,0,-606.057	1/1:80:2,77:2:72:77:2722:-237.212,-17.3041,0	1/1:208:0,208:0:0:208:7374:-660.161,-62.6142,0	1/1:173:2,171:2:72:171:6047:-536.925,-45.2501,0	1/1:39:0,39:0:0:39:1382:-124.539,-11.7402,0	0/1:225:105,120:105:3684:120:4239:-313.108,0,-263.99	1/1:163:0,163:0:0:163:5714:-512.627,-49.0679,0	1/1:277:0,277:0:0:277:9842:-882.831,-83.3853,0	1/1:328:1,327:1:36:327:11651:-1043.05,-95.1396,0	0/1:287:160,127:160:5675:127:4493:-316.266,0,-424.182	1/1:242:3,239:3:99:239:8526:-754.99,-63.6848,0	0/1:22:18,4:18:628:4:144:-6.65749,0,-50.2146	0/1:314:169,145:169:6038:145:5146:-367.547,0,-448.832	1/1:299:2,297:2:72:297:10568:-940.659,-83.1712,0	1/1:420:1,419:1:36:419:14915:-1335.94,-122.834,0	1/1:179:0,179:0:0:179:6374:-572.255,-53.8844,0	0/1:147:68,79:68:2383:79:2818:-209.164,0,-170.157	0/1:187:89,98:89:3154:98:3487:-257.42,0,-227.782	1/1:305:0,305:0:0:305:10839:-973.677,-91.8142,0	1/1:88:1,87:1:36:87:3054:-270.143,-22.8924,0	1/1:148:0,148:0:0:148:5242:-470.01,-44.5524,0	1/1:176:0,174:0:0:174:6203:-555.731,-52.3792,0	0/1:100:45,55:45:1595:55:1929:-143.374,0,-113.737	0/1:163:92,71:92:3240:71:2538:-178.719,0,-242.712	0/1:143:80,62:80:2823:62:2185:-152.878,0,-211.193	1/1:115:0,114:0:0:114:4054:-363.099,-34.3174,0	1/1:177:0,177:0:0:177:6272:-563.679,-53.2823,0
chr03	24476756	.	G	A	219201	PASS	AB=0.49722;ABP=3.23971;AC=157;AF=0.835106;AN=188;AO=10070;CIGAR=1X;DP=11804;DPB=11804;DPRA=0;EPP=21869.7;EPPR=3746.65;GTI=0;LEN=1;MEANALT=1.02128;MQM=53.6031;MQMR=59.4376;NS=94;NUMALT=1;ODDS=6.07074;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=358575;QR=61720;RO=1732;RPL=1;RPP=21861.1;RPPR=3737.99;RPR=10069;RUN=1;SAF=1;SAP=21861.1;SAR=10069;SRF=1;SRP=3755.32;SRR=1731;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:12,24:12:423:24:837:-64.222,0,-27.5535	1/1:232:0,232:0:0:232:8254:-736.323,-69.839,0	0/1:243:131,112:131:4695:112:4009:-284.318,0,-349.029	1/1:254:1,253:1:36:253:9068:-809.845,-72.8633,0	1/1:125:0,125:0:0:125:4462:-399.42,-37.6288,0	1/1:76:0,76:0:0:76:2685:-240.073,-22.8783,0	1/1:185:0,185:0:0:185:6605:-592.571,-55.6906,0	1/1:202:0,202:0:0:202:7204:-641.532,-60.8081,0	1/1:141:0,141:0:0:141:5048:-451.927,-42.4452,0	0/1:166:72,94:72:2569:94:3322:-248.851,0,-181.257	1/1:33:0,33:0:0:33:1166:-104.48,-9.93399,0	1/1:86:0,86:0:0:86:3063:-274.3,-25.8886,0	1/1:58:0,58:0:0:58:2019:-180.235,-17.4597,0	1/1:44:0,44:0:0:44:1536:-137.467,-13.2453,0	1/1:80:0,80:0:0:80:2833:-254.302,-24.0824,0	0/1:45:21,24:21:752:24:845:-61.8135,0,-54.4553	0/1:69:33,36:33:1184:36:1264:-92.4727,0,-86.0786	1/1:71:0,71:0:0:71:2514:-223.791,-21.3731,0	0/1:66:37,29:37:1332:29:1033:-73.0564,0,-100.298	1/1:334:1,333:1:36:333:11873:-1060.22,-96.9457,0	1/1:269:0,269:0:0:269:9571:-855.163,-80.9771,0	1/1:117:0,117:0:0:117:4208:-378.239,-35.2205,0	1/1:90:0,90:0:0:90:3197:-287.084,-27.0927,0	0/1:172:66,106:66:2326:106:3783:-287.373,0,-157.804	1/1:101:0,101:0:0:101:3620:-322.542,-30.404,0	0/1:390:216,173:216:7717:173:6167:-436.505,0,-577.135	1/1:385:0,385:0:0:385:13793:-1232.78,-115.897,0	0/1:22:14,8:14:500:8:288:-19.4774,0,-38.7089	1/1:302:1,301:1:36:301:10740:-958.367,-87.3128,0	1/1:83:0,83:0:0:83:2933:-263.201,-24.9855,0	1/1:110:0,110:0:0:110:3912:-350.894,-33.1133,0	0/1:15:7,8:7:239:8:288:-21.7147,0,-17.3273	0/1:26:11,15:11:396:15:531:-39.9502,0,-28.149	1/1:12:0,12:0:0:12:432:-38.5362,-3.61236,0	1/1:8:0,8:0:0:8:279:-25.3887,-2.40824,0	1/1:20:0,20:0:0:20:720:-64.8612,-6.0206,0	1/1:184:0,184:0:0:184:6516:-585.387,-55.3895,0	1/1:222:0,222:0:0:222:7923:-710.596,-66.8287,0	0/1:81:43,38:43:1514:38:1359:-97.7301,0,-111.315	1/1:9:0,9:0:0:9:324:-29.4532,-2.70927,0	0/1:238:100,138:100:3583:138:4922:-369.264,0,-250.998	1/1:49:0,49:0:0:49:1756:-157.968,-14.7505,0	0/1:224:126,98:126:4460:98:3511:-246.808,0,-333.948	0/1:71:39,32:39:1368:32:1139:-81.0011,0,-102.04	1/1:62:0,62:0:0:62:2168:-194.679,-18.6639,0	1/1:214:1,213:1:36:213:7575:-677.344,-60.8221,0	1/1:183:0,183:0:0:183:6514:-582.921,-55.0885,0	1/1:282:0,282:0:0:282:10037:-899.794,-84.8905,0	1/1:162:1,161:1:36:161:5754:-512.053,-45.1696,0	0/1:219:109,110:109:3874:110:3934:-286.811,0,-282.846	1/1:237:0,237:0:0:237:8403:-755.601,-71.3441,0	1/1:57:0,57:0:0:57:2048:-183.916,-17.1587,0	0/1:135:62,73:62:2213:73:2598:-191.892,0,-158.769	1/1:54:0,54:0:0:54:1940:-174.609,-16.2556,0	0/1:9:4,5:4:144:5:176:-13.0681,0,-10.6043	0/1:159:75,84:75:2657:84:2944:-215.97,0,-191.069	1/1:82:0,82:0:0:82:2918:-261.924,-24.6845,0	0/1:24:9,15:9:324:15:540:-41.6967,0,-22.2811	0/1:35:13,22:13:459:22:788:-60.5772,0,-31.108	1/1:89:1,88:1:36:88:3101:-274.498,-23.1934,0	1/1:96:0,96:0:0:96:3412:-306.37,-28.8989,0	1/1:9:0,9:0:0:9:320:-29.0369,-2.70927,0	1/1:161:0,161:0:0:161:5729:-515.007,-48.4658,0	1/1:302:0,302:0:0:302:10782:-966.773,-90.9111,0	1/1:253:0,253:0:0:253:9039:-809.845,-76.1606,0	1/1:133:0,133:0:0:133:4725:-422.226,-40.037,0	1/1:224:5,219:5:180:219:7762:-680.09,-50.8833,0	0/1:148:109,39:109:3900:39:1395:-81.164,0,-306.623	1/1:29:0,29:0:0:29:1040:-93.5293,-8.72987,0	1/1:107:0,107:0:0:107:3822:-341.421,-32.2102,0	1/1:76:0,76:0:0:76:2728:-245.37,-22.8783,0	1/1:24:0,24:0:0:24:844:-76.1876,-7.22472,0	0/1:98:37,61:37:1320:61:2176:-164.446,0,-89.5561	1/1:105:0,105:0:0:105:3731:-333.529,-31.6082,0	1/1:153:0,153:0:0:153:5463:-489.338,-46.0576,0	1/1:216:2,214:2:72:214:7651:-679.375,-58.1858,0	0/1:190:105,85:105:3741:85:3013:-212.405,0,-279.502	1/1:142:1,141:1:27:141:5017:-446.201,-40.0465,0	0/1:22:18,4:18:648:4:144:-6.65749,0,-52.021	0/1:183:81,102:81:2875:102:3641:-271.763,0,-203.45	1/1:210:0,210:0:0:210:7492:-671.2,-63.2163,0	1/1:268:1,267:1:36:267:9508:-849.599,-77.0778,0	1/1:71:0,71:0:0:71:2513:-225.947,-21.3731,0	0/1:63:22,41:22:783:41:1464:-112.721,0,-51.5093	0/1:86:41,45:41:1472:45:1569:-115.289,0,-106.881	1/1:147:0,147:0:0:147:5218:-468.587,-44.2514,0	1/1:48:0,48:0:0:48:1711:-153.025,-14.4494,0	1/1:71:0,70:0:0:70:2508:-224.44,-21.0721,0	1/1:88:0,88:0:0:88:3136:-281.507,-26.4906,0	0/1:33:12,21:12:432:21:744:-57.1937,0,-29.2872	0/1:67:46,21:46:1633:21:756:-47.8325,0,-127.076	0/1:82:46,36:46:1656:36:1255:-88.0146,0,-124.637	1/1:65:0,65:0:0:65:2283:-204.431,-19.567,0	1/1:85:0,85:0:0:85:2994:-268.835,-25.5876,0
chr03	24476759	.	C	T	26237.8	PASS	AB=0.486178;ABP=8.53294;AC=31;AF=0.164894;AN=188;AO=1633;CIGAR=1X;DP=11723;DPB=11723;DPRA=1.00863;EPP=3523.01;EPPR=21887.1;GTI=0;LEN=1;MEANALT=1.14634;MQM=59.3803;MQMR=53.6647;NS=94;NUMALT=1;ODDS=0.915753;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57539;QR=357394;RO=10078;RPL=4;RPP=3514.37;RPPR=21878.4;RPR=1629;RUN=1;SAF=1;SAP=3540.34;SAR=1632;SRF=1;SRP=21878.4;SRR=10077;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:24,12:24:860:12:424:-27.6449,0,-66.2283	0/0:227:227,0:227:8081:0:0:0,-68.3338,-721.673	0/1:243:116,127:116:4106:127:4497:-331.677,0,-293.331	0/0:254:253,0:253:9001:0:0:0,-76.1606,-807.818	0/0:126:126,0:126:4486:0:0:0,-37.9298,-401.551	0/0:76:76,0:76:2715:0:0:0,-22.8783,-242.52	0/0:184:184,0:184:6533:0:0:0,-55.3895,-586.242	0/0:201:201,0:201:7130:0:0:0,-60.507,-634.978	0/0:140:140,0:140:4980:0:0:0,-42.1442,-446.284	0/1:160:92,68:92:3239:68:2394:-167.546,0,-243.127	0/0:33:33,0:33:1158:0:0:0,-9.93399,-103.767	0/0:85:85,0:85:2979:0:0:0,-25.5875,-266.837	0/0:57:56,1:56:1935:1:36:0,-13.7711,-169.32	0/0:44:44,0:44:1572:0:0:0,-13.2453,-140.614	0/0:84:84,0:84:2957:0:0:0,-25.2865,-265.334	0/1:46:25,21:25:859:21:734:-52.5284,0,-63.3188	0/1:65:34,30:34:1192:30:1036:-73.9302,0,-87.2618	0/0:72:72,0:72:2541:0:0:0,-21.6742,-226.597	0/1:65:29,35:29:1031:35:1191:-87.8875,0,-73.2592	0/0:331:328,1:328:11655:1:36:0,-95.7972,-1040.84	0/0:272:272,0:272:9664:0:0:0,-81.8802,-863.562	0/0:123:123,0:123:4378:0:0:0,-37.0267,-393.046	0/0:89:89,0:89:3184:0:0:0,-26.7917,-285.415	0/1:168:106,62:106:3777:62:2182:-146.056,0,-288.265	0/0:97:97,0:97:3449:0:0:0,-29.1999,-307.964	0/1:382:174,208:174:6193:208:7320:-543.409,0,-441.182	0/0:381:381,0:381:13574:0:0:0,-114.692,-1213.3	0/1:21:8,13:8:288:13:460:-35.4091,0,-19.7784	0/0:303:303,0:303:10738:0:0:0,-91.2121,-962.301	0/0:85:85,0:85:3010:0:0:0,-25.5875,-269.204	0/0:109:109,0:109:3860:0:0:0,-32.8123,-346.004	0/1:13:8,5:8:288:5:176:-12.2716,0,-22.3168	0/1:23:15,8:15:524:8:288:-19.3391,0,-40.228	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.3054	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.0731	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.6365	0/0:187:187,0:187:6565:0:0:0,-56.2926,-589.816	0/0:219:218,0:218:7768:0:0:0,-65.6245,-696.599	0/1:76:39,37:39:1379:37:1255:-89.521,0,-100.863	0/0:9:9,0:9:315:0:0:0,-2.70927,-28.6387	0/1:228:139,89:139:4960:89:3160:-215.955,0,-375.425	0/0:51:51,0:51:1819:0:0:0,-15.3525,-163.632	0/1:210:95,115:95:3348:115:4065:-302.722,0,-237.07	0/1:73:35,38:35:1205:38:1304:-95.6782,0,-86.4494	0/0:61:61,0:61:2133:0:0:0,-18.3628,-191.839	0/0:223:220,2:220:7790:2:72:0,-60.3469,-693.635	0/0:182:182,0:182:6459:0:0:0,-54.7875,-578.231	0/0:277:277,0:277:9810:0:0:0,-83.3853,-879.926	0/0:164:163,1:163:5797:1:36:0,-45.7716,-515.913	0/1:213:111,102:111:3935:102:3601:-259.447,0,-289.393	0/0:237:237,0:237:8391:0:0:0,-71.3441,-754.029	0/0:57:56,0:56:1990:0:0:0,-16.8577,-178.598	0/1:130:71,59:71:2527:59:2103:-150.373,0,-187.019	0/0:53:52,0:52:1837:0:0:0,-15.6536,-165.151	0/1:8:4,4:4:140:4:131:-9.70523,0,-10.2354	0/1:161:87,74:87:3080:74:2636:-188.649,0,-227.494	0/0:85:84,1:84:3004:1:36:0,-22.0848,-266.071	0/1:24:15,9:15:532:9:320:-21.9176,0,-40.9743	0/1:35:22,13:22:779:13:468:-31.9236,0,-59.7988	0/0:89:88,1:88:3144:1:36:0,-23.1934,-277.773	0/0:96:96,0:96:3398:0:0:0,-28.8989,-305.248	0/0:9:9,0:9:316:0:0:0,-2.70927,-28.6748	0/0:160:160,0:160:5672:0:0:0,-48.1648,-509.736	0/0:309:309,0:309:10985:0:0:0,-93.0183,-984.359	0/0:253:253,0:253:9013:0:0:0,-76.1606,-808.276	0/0:131:129,0:129:4570:0:0:0,-38.8329,-409.152	0/0:222:216,5:216:7663:5:176:0,-50.6135,-671.675	0/1:139:36,103:36:1292:103:3634:-285.41,0,-74.6577	0/0:30:30,0:30:1076:0:0:0,-9.0309,-96.638	0/0:110:110,0:110:3875:0:0:0,-33.1133,-346.243	0/0:76:76,0:76:2658:0:0:0,-22.8783,-239.024	0/0:24:24,0:24:851:0:0:0,-7.22472,-76.8063	0/1:98:62,36:62:2184:36:1270:-85.0498,0,-165.221	0/0:103:103,0:103:3680:0:0:0,-31.0061,-329.902	0/0:155:154,1:154:5443:1:36:0,-43.2052,-484.192	0/0:218:217,1:217:7721:1:36:0,-62.0263,-689.078	0/1:180:88,92:88:3144:92:3242:-237.61,0,-226.476	0/0:142:142,0:142:5060:0:0:0,-42.7463,-452.569	0/1:21:4,17:4:144:17:612:-49.0836,0,-6.95852	0/1:183:103,80:103:3664:80:2860:-202.099,0,-273.494	0/0:207:207,0:207:7335:0:0:0,-62.3132,-657.144	0/0:266:265,1:265:9438:1:36:0,-76.4757,-843.457	0/0:69:69,0:69:2448:0:0:0,-20.7711,-220.138	0/1:62:40,22:40:1436:22:766:-50.2752,0,-110.631	0/1:86:46,40:46:1603:40:1415:-101.752,0,-118.412	0/0:151:151,0:151:5246:0:0:0,-45.4555,-470.354	0/0:48:48,0:48:1665:0:0:0,-14.4494,-149.072	0/0:72:72,0:72:2531:0:0:0,-21.6742,-227.085	0/0:89:89,0:89:3148:0:0:0,-26.7917,-282.668	0/1:33:23,10:23:824:10:352:-22.0842,0,-64.1368	0/1:65:21,44:21:741:44:1521:-117.603,0,-47.0834	0/1:81:36,45:36:1256:45:1586:-118.638,0,-88.6737	0/0:63:63,0:63:2243:0:0:0,-18.9649,-200.668	0/0:86:86,0:86:3027:0:0:0,-25.8886,-272.154
chr03	24476768	.	TGCG	CCCA,CCCG	261993	PASS	AB=0.497562,0.497276;ABP=3.19027,3.23511;AC=157,31;AF=0.835106,0.164894;AN=188;AO=10273,1745;CIGAR=2X1M1X,2X2M;DP=12095;DPB=12095.5;DPRA=0,0.969271;EPP=21999,3757.57;EPPR=5.18177;GTI=0;LEN=4,2;MEANALT=2.14894,2.67568;MQM=53.5695,59.3857;MQMR=60;NS=94;NUMALT=2;ODDS=5.38297;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=361758,61484;QR=35;RO=1;RPL=10237,1741;RPP=21999,3757.57;RPPR=5.18177;RPR=36,4;RUN=1,1;SAF=0,0;SAP=22310.5,3792.23;SAR=10273,1745;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:37:0,25,12:0:0:25,12:881,415:-104.868,-34.063,-26.5372,-71.1511,0,-67.5388	1/1:236:0,232,0:0:0:232,0:8163,0:-729.265,-69.839,0,-729.265,-69.839,-729.265	1/2:252:0,118,133:0:0:118,133:4137,4719:-718.085,-384.095,-348.574,-333.981,0,-293.944	1/1:264:0,264,0:0:0:264,0:9226,0:-827.499,-79.4719,0,-827.499,-79.4719,-827.499	1/1:128:0,127,0:0:0:127,0:4511,0:-403.747,-38.2308,0,-403.747,-38.2308,-403.747	1/1:81:0,81,0:0:0:81,0:2857,0:-254.991,-24.3834,0,-254.991,-24.3834,-254.991	1/1:186:0,184,0:0:0:184,0:6478,0:-581.826,-55.3895,0,-581.826,-55.3895,-581.826	1/1:210:0,208,0:0:0:208,0:7277,0:-649.118,-62.6142,0,-649.118,-62.6142,-649.118	1/1:144:0,143,0:0:0:143,0:5050,0:-452.356,-43.0473,0,-452.356,-43.0473,-452.356	1/2:169:0,93,76:0:0:93,76:3287,2644:-482.602,-215.302,-187.306,-267.651,0,-244.773	1/1:34:0,34,0:0:0:34,0:1199,0:-107.447,-10.235,0,-107.447,-10.235,-107.447	1/1:87:0,87,0:0:0:87,0:3038,0:-272.172,-26.1896,0,-272.172,-26.1896,-272.172	1/1:58:0,58,0:0:0:58,0:2034,0:-181.476,-17.4597,0,-181.476,-17.4597,-181.476	1/1:44:0,43,0:0:0:43,0:1517,0:-135.28,-12.9443,0,-135.28,-12.9443,-135.28	1/1:85:0,85,0:0:0:85,0:3012,0:-270.29,-25.5876,0,-270.29,-25.5876,-270.29	1/2:47:0,23,22:0:0:23,22:825,768:-129.052,-62.4861,-55.5624,-66.5911,0,-59.9685	1/2:70:0,37,33:0:0:37,33:1305,1151:-199.328,-93.9402,-82.802,-105.737,0,-95.8031	1/1:74:0,74,0:0:0:74,0:2576,0:-229.653,-22.2762,0,-229.653,-22.2762,-229.653	1/2:68:0,31,37:0:0:31,37:1100,1332:-198.234,-109.028,-99.696,-89.5627,0,-78.4246	1/1:339:0,336,0:0:0:336,0:11800,0:-1058.08,-101.146,0,-1058.08,-101.146,-1058.08	1/1:278:0,278,0:0:0:278,0:9797,0:-877.317,-83.6863,0,-877.317,-83.6863,-877.317	1/1:123:0,122,0:0:0:122,0:4283,0:-384.58,-36.7257,0,-384.58,-36.7257,-384.58	1/1:91:0,91,0:0:0:91,0:3225,0:-289.148,-27.3937,0,-289.148,-27.3937,-289.148	1/2:175:0,110,64:0:0:110,64:3857,2258:-496.216,-183.84,-150.727,-312.368,0,-293.102	1/1:102:0,102,0:0:0:102,0:3577,0:-319.271,-30.7051,0,-319.271,-30.7051,-319.271	1/2:403:0,178,221:0:0:178,221:6284,7798:-1145.38,-634.635,-581.051,-510.736,0,-444.209	1/1:393:0,390,0:0:0:390,0:13764,0:-1230.07,-117.402,0,-1230.07,-117.402,-1230.07	1/2:22:0,8,14:0:0:8,14:288,493:-63.8189,-40.4826,-38.0744,-23.6918,0,-19.4774	1/1:309:1,306,0:1:35:306,0:10723,0:-957.499,-89.2705,0,-957.8,-92.1152,-960.648	1/1:86:0,86,0:0:0:86,0:3035,0:-271.236,-25.8886,0,-271.236,-25.8886,-271.236	1/1:113:0,113,0:0:0:113,0:3979,0:-356.764,-34.0164,0,-356.764,-34.0164,-356.764	1/2:15:0,8,7:0:0:8,7:288,250:-44.2033,-20.7395,-18.3312,-23.8219,0,-21.7147	1/2:26:0,14,11:0:0:14,11:484,381:-69.9711,-30.9515,-26.737,-39.0091,0,-35.6978	1/1:12:0,12,0:0:0:12,0:417,0:-37.2184,-3.61236,0,-37.2184,-3.61236,-37.2184	1/1:9:0,9,0:0:0:9,0:324,0:-29.4317,-2.70927,0,-29.4317,-2.70927,-29.4317	1/1:20:0,20,0:0:0:20,0:711,0:-64.0809,-6.0206,0,-64.0809,-6.0206,-64.0809	1/1:192:0,190,0:0:0:190,0:6663,0:-598.139,-57.1957,0,-598.139,-57.1957,-598.139	1/1:227:0,225,0:0:0:225,0:7963,0:-714.358,-67.7318,0,-714.358,-67.7318,-714.358	1/2:82:0,40,42:0:0:40,42:1421,1479:-235.404,-120.258,-108.217,-115.498,0,-102.855	1/1:9:0,9,0:0:0:9,0:321,0:-29.1848,-2.70927,0,-29.1848,-2.70927,-29.1848	1/2:241:0,138,102:0:0:138,102:4892,3623:-691.785,-295.162,-253.62,-396.617,0,-365.912	1/1:51:0,50,0:0:0:50,0:1769,0:-158.817,-15.0515,0,-158.817,-15.0515,-158.817	1/2:227:0,97,129:0:0:97,129:3424,4519:-645.127,-367.635,-338.435,-277.592,0,-238.759	1/2:74:0,34,39:0:0:34,39:1199,1371:-208.759,-111.587,-101.352,-97.1636,0,-85.4234	1/1:66:0,66,0:0:0:66,0:2332,0:-209.357,-19.868,0,-209.357,-19.868,-209.357	1/1:223:0,222,1:0:0:222,1:7788,36:-699.75,-66.8287,0,-696.812,-63.5314,-696.511	1/1:184:0,183,0:0:0:183,0:6453,0:-577.879,-55.0885,0,-577.879,-55.0885,-577.879	1/1:290:0,286,0:0:0:286,0:9929,0:-891.37,-86.0946,0,-891.37,-86.0946,-891.37	1/1:166:0,165,0:0:0:165,0:5833,0:-523.015,-49.67,0,-523.015,-49.67,-523.015	1/2:222:0,111,109:0:0:111,109:3908,3870:-631.85,-315.241,-281.826,-316.603,0,-283.79	1/1:242:0,237,0:0:0:237,0:8336,0:-749.184,-71.3441,0,-749.184,-71.3441,-749.184	1/1:57:0,57,0:0:0:57,0:2019,0:-181.446,-17.1587,0,-181.446,-17.1587,-181.446	1/2:134:0,73,61:0:0:73,61:2598,2178:-388.378,-177.893,-155.918,-210.84,0,-192.477	1/1:55:0,55,0:0:0:55,0:1924,0:-173.252,-16.5567,0,-173.252,-16.5567,-173.252	1/2:9:0,5,4:0:0:5,4:173,144:-25.758,-12.1095,-10.6043,-13.9982,0,-12.7941	1/2:163:0,88,75:0:0:88,75:3066,2619:-460.974,-213.065,-186.574,-248.256,0,-225.679	1/1:85:0,84,0:0:0:84,0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chr03	24476780	.	G	A	28916.2	PASS	AB=0.500581;ABP=3.0204;AC=31;AF=0.164894;AN=188;AO=1735;CIGAR=1X;DP=11953;DPB=11953;DPRA=1.06601;EPP=3770.51;EPPR=22184.6;GTI=0;LEN=1;MEANALT=1;MQM=59.3435;MQMR=53.5883;NS=94;NUMALT=1;ODDS=5.34367;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61999;QR=365389;RO=10215;RPL=1735;RPP=3770.51;RPPR=22184.6;RPR=0;RUN=1;SAF=0;SAP=3770.51;SAR=1735;SRF=0;SRP=22184.6;SRR=10215;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:34:23,11:23:820:11:392:-25.3817,0,-62.5191	0/0:236:236,0:236:8442:0:0:0,-71.0431,-753.08	0/1:250:117,133:117:4183:133:4755:-352.58,0,-297.272	0/0:265:265,0:265:9470:0:0:0,-79.7729,-848.795	0/0:128:128,0:128:4577:0:0:0,-38.5318,-409.788	0/0:78:78,0:78:2769:0:0:0,-23.4803,-247.694	0/0:187:187,0:187:6701:0:0:0,-56.2926,-600.555	0/0:207:207,0:207:7375:0:0:0,-62.3132,-656.478	0/0:146:146,0:146:5223:0:0:0,-43.9504,-467.628	0/1:168:93,75:93:3328:75:2656:-188.687,0,-248.718	0/0:34:34,0:34:1224:0:0:0,-10.235,-109.694	0/0:84:84,0:84:3011:0:0:0,-25.2865,-269.696	0/0:58:58,0:58:2084:0:0:0,-17.4597,-185.523	0/0:44:44,0:44:1580:0:0:0,-13.2453,-141.273	0/0:83:83,0:83:2958:0:0:0,-24.9855,-265.376	0/1:46:24,22:24:851:22:773:-56.0375,0,-62.8292	0/1:69:36,33:36:1296:33:1168:-84.6389,0,-95.1028	0/0:72:72,0:72:2579:0:0:0,-21.6742,-230.365	0/1:67:31,36:31:1108:36:1296:-96.7586,0,-79.5046	0/0:332:331,0:331:11884:0:0:0,-99.6409,-1065	0/0:274:274,0:274:9809:0:0:0,-82.4822,-876.531	0/0:120:120,0:120:4295:0:0:0,-36.1236,-386.109	0/0:91:91,0:91:3272:0:0:0,-27.3937,-293.182	0/1:170:106,64:106:3777:64:2296:-155.71,0,-287.78	0/0:101:101,0:101:3612:0:0:0,-30.404,-322.002	0/1:396:176,220:176:6292:220:7900:-591.312,0,-445.898	0/0:385:384,0:384:13746:0:0:0,-115.596,-1227.82	0/1:22:8,14:8:288:14:500:-38.7089,0,-19.4774	0/0:310:310,0:310:11104:0:0:0,-93.3193,-993.923	0/0:85:84,0:84:2999:0:0:0,-25.2865,-267.761	0/0:111:111,0:111:3983:0:0:0,-33.4143,-357.065	0/1:14:8,6:8:284:6:216:-15.5761,0,-21.6545	0/1:26:15,11:15:536:11:381:-26.7891,0,-40.4018	0/0:12:12,0:12:432:0:0:0,-3.61236,-38.5362	0/0:8:8,0:8:273:0:0:0,-2.40824,-24.8421	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.5606	0/0:193:193,0:193:6906:0:0:0,-58.0988,-620.092	0/0:223:223,0:223:7997:0:0:0,-67.1297,-717.114	0/1:79:38,41:38:1360:41:1476:-108.496,0,-98.4256	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.0947	0/1:240:137,103:137:4920:103:3681:-259.183,0,-368.42	0/0:51:51,0:51:1828:0:0:0,-15.3525,-164.436	0/1:221:94,127:94:3364:127:4556:-343.357,0,-235.705	0/1:69:34,35:34:1220:35:1260:-92.9321,0,-88.9552	0/0:65:65,0:65:2303:0:0:0,-19.5669,-206.598	0/0:222:221,1:221:7899:1:36:0,-63.2304,-705.506	0/0:183:183,0:183:6568:0:0:0,-55.0885,-587.69	0/0:281:280,1:280:9952:1:36:0,-81.0867,-889.529	0/0:164:164,0:164:5880:0:0:0,-49.3689,-527.021	0/1:221:111,110:111:3975:110:3909:-285.396,0,-289.241	0/0:241:241,0:241:8623:0:0:0,-72.5482,-774.861	0/0:56:56,0:56:2012:0:0:0,-16.8577,-180.682	0/1:135:73,62:73:2624:62:2194:-157.051,0,-194.19	0/0:54:54,0:54:1935:0:0:0,-16.2556,-174.165	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.4302	0/1:159:87,72:87:3080:72:2569:-183.279,0,-228.091	0/0:82:82,0:82:2948:0:0:0,-24.6845,-264.498	0/1:24:15,9:15:532:9:324:-22.2811,0,-40.9752	0/1:35:21,14:21:752:14:504:-35.162,0,-57.341	0/0:88:87,1:87:3089:1:36:0,-22.8924,-272.921	0/0:97:97,0:97:3466:0:0:0,-29.1999,-311.334	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.0369	0/0:161:161,0:161:5755:0:0:0,-48.4658,-516.982	0/0:311:310,1:310:11047:1:36:0,-90.1176,-985.806	0/0:260:260,0:260:9284:0:0:0,-78.2678,-831.732	0/0:133:133,0:133:4768:0:0:0,-40.037,-425.502	0/0:221:216,5:216:7737:5:172:0,-50.7115,-677.758	0/1:150:39,111:39:1404:111:3945:-310.071,0,-81.3709	0/0:30:30,0:30:1080:0:0:0,-9.0309,-96.9956	0/0:110:110,0:110:3943:0:0:0,-33.1133,-352.028	0/0:75:75,0:75:2684:0:0:0,-22.5772,-241.405	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.4254	0/1:100:62,38:62:2228:38:1364:-92.9046,0,-168.722	0/0:106:106,0:106:3763:0:0:0,-31.9092,-337.168	0/0:151:151,0:151:5395:0:0:0,-45.4555,-483.128	0/0:220:219,1:219:7841:1:36:0,-62.6283,-700.387	0/1:192:88,104:88:3164:104:3713:-276.175,0,-224.79	0/0:145:144,1:144:5172:1:36:0,-40.0511,-458.772	0/1:21:4,17:4:144:17:608:-48.7222,0,-6.95852	0/1:183:103,80:103:3678:80:2876:-203.403,0,-274.918	0/0:212:212,0:212:7586:0:0:0,-63.8184,-679.339	0/0:272:271,1:271:9694:1:36:0,-78.2819,-866.295	0/0:74:73,1:73:2615:1:36:0,-18.8217,-231.647	0/1:63:41,22:41:1468:22:783:-51.5093,0,-113.121	0/1:90:48,42:48:1698:42:1508:-108.915,0,-125.579	0/0:149:149,0:149:5344:0:0:0,-44.8535,-479.053	0/0:49:49,0:49:1755:0:0:0,-14.7505,-157.143	0/0:74:74,0:74:2639:0:0:0,-22.2762,-236.561	0/0:91:91,0:91:3254:0:0:0,-27.3937,-291.814	0/1:34:22,12:22:773:12:424:-28.2614,0,-59.2509	0/1:68:21,47:21:756:47:1688:-131.725,0,-47.5314	0/1:85:38,47:38:1352:47:1680:-125.893,0,-94.8137	0/0:66:66,0:66:2347:0:0:0,-19.868,-209.931	0/0:88:88,0:88:3151:0:0:0,-26.4906,-282.794
chr03	24486621	.	G	A	26006.6	PASS	AB=0.471594;ABP=25.956;AC=31;AF=0.164894;AN=188;AO=1563;CIGAR=1X;DP=12307;DPB=12307;DPRA=1.0964;EPP=3074.98;EPPR=21501;GTI=3;LEN=1;MEANALT=1;MQM=59.5701;MQMR=59.9406;NS=94;NUMALT=1;ODDS=8.22522;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54954;QR=383468;RO=10743;RPL=38;RPP=3074.98;RPPR=21501;RPR=1525;RUN=1;SAF=1563;SAP=3397.02;SAR=0;SRF=10743;SRP=23331.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:20,17:20:712:17:592:-42.4683,0,-53.2685	0/0:127:127,0:127:4539:0:0:0,-38.2308,-408.673	0/1:104:56,48:56:2016:48:1673:-119.538,0,-150.406	0/0:281:281,0:281:10026:0:0:0,-84.5894,-902.277	0/0:113:113,0:113:4037:0:0:0,-34.0164,-363.512	0/0:84:84,0:84:2989:0:0:0,-25.2865,-269.24	0/0:161:161,0:161:5742:0:0:0,-48.4658,-516.891	0/0:299:297,2:297:10609:2:72:0,-83.1712,-947.108	0/0:129:129,0:129:4605:0:0:0,-38.8329,-414.614	0/1:123:58,65:58:2076:65:2282:-168.609,0,-150.079	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.307	0/0:87:87,0:87:3092:0:0:0,-26.1896,-277.48	0/0:77:77,0:77:2768:0:0:0,-23.1793,-249.361	0/0:120:120,0:120:4278:0:0:0,-36.1236,-385.197	0/0:68:68,0:68:2433:0:0:0,-20.47,-219.217	0/1:64:37,27:37:1328:27:960:-67.4504,0,-100.556	0/1:68:41,27:41:1467:27:968:-66.9673,0,-111.855	0/0:80:80,0:80:2850:0:0:0,-24.0824,-256.737	0/1:44:19,25:19:684:25:880:-66.2679,0,-48.645	0/0:303:302,1:302:10803:1:36:0,-87.6138,-968.573	0/0:124:124,0:124:4390:0:0:0,-37.3277,-395.134	0/0:150:150,0:150:5336:0:0:0,-45.1545,-480.367	0/0:154:154,0:154:5490:0:0:0,-46.3586,-494.226	0/1:192:113,79:113:4052:79:2727:-187.858,0,-307.069	0/0:102:102,0:102:3606:0:0:0,-30.7051,-324.64	0/1:402:214,188:214:7659:188:6625:-475.056,0,-568.318	0/0:244:244,0:244:8699:0:0:0,-73.4513,-782.766	0/1:44:12,32:12:432:32:1140:-89.654,0,-25.9759	0/0:355:355,0:355:12615:0:0:0,-106.866,-1135.04	0/0:222:216,6:216:7718:6:212:0,-47.4072,-675.228	0/0:234:233,1:233:8352:1:36:0,-66.8427,-748.08	0/1:4:3,1:3:108:1:32:-1.99519,0,-8.87105	0/1:20:8,12:8:288:12:420:-32.1134,0,-20.2468	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:14:14,0:14:495:0:0:0,-4.21442,-44.883	0/0:254:254,0:254:9044:0:0:0,-76.4616,-813.939	0/0:253:253,0:253:8991:0:0:0,-76.1606,-809.171	0/1:61:29,32:29:1044:32:1123:-83.0143,0,-75.912	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:214:135,79:135:4825:79:2812:-188.859,0,-369.983	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/1:268:152,116:152:5412:116:4092:-287.725,0,-406.534	0/1:100:57,43:57:2031:43:1528:-107.707,0,-152.873	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/0:178:178,0:178:6332:0:0:0,-53.5833,-569.965	0/0:126:126,0:126:4491:0:0:0,-37.9298,-404.36	0/0:330:329,0:329:11755:0:0:0,-99.0389,-1057.4	0/0:164:164,0:164:5865:0:0:0,-49.3689,-527.96	0/1:212:125,87:125:4430:87:3041:-210.085,0,-335.036	0/0:246:245,1:245:8742:1:32:0,-70.8541,-783.479	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:168:86,82:86:3076:82:2866:-207.559,0,-226.268	0/0:95:95,0:95:3370:0:0:0,-28.5978,-303.504	0/1:13:2,11:2:72:11:366:-29.3461,0,-2.92333	0/1:134:71,63:71:2532:63:2199:-157.83,0,-187.794	0/0:78:78,0:78:2761:0:0:0,-23.4803,-248.721	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:24:13,11:13:468:11:369:-26.3078,0,-35.2349	0/0:141:141,0:141:5048:0:0:0,-42.4452,-454.465	0/0:123:123,0:123:4408:0:0:0,-37.0267,-396.887	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:323:323,0:323:11553:0:0:0,-97.2327,-1039.57	0/0:346:344,2:344:12260:2:68:0,-97.6987,-1096.79	0/0:115:115,0:115:4105:0:0:0,-34.6184,-369.634	0/0:93:93,0:93:3312:0:0:0,-27.9958,-298.298	0/0:247:246,1:246:8762:1:32:0,-71.1551,-784.652	0/1:16:9,7:9:316:7:252:-18.1993,0,-23.9624	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:44:43,1:43:1531:1:36:0,-9.64704,-134.484	0/0:118:118,0:118:4232:0:0:0,-35.5215,-381.059	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:163:63,100:63:2247:100:3489:-265.14,0,-153.425	0/0:108:108,0:108:3849:0:0:0,-32.5112,-346.606	0/0:280:280,0:280:10013:0:0:0,-84.2884,-901.104	0/0:220:220,0:220:7896:0:0:0,-66.2266,-710.66	0/1:185:97,88:97:3446:88:3120:-225.126,0,-254.661	0/0:161:159,2:159:5691:2:72:0,-41.6291,-505.471	0/1:21:19,2:19:680:2:72:-0.515093,0,-55.2075	0/1:150:78,72:78:2792:72:2524:-182.029,0,-206.366	0/0:134:134,0:134:4788:0:0:0,-40.338,-431.073	0/0:335:334,1:334:11932:1:36:0,-97.2468,-1070.13	0/0:127:127,0:127:4529:0:0:0,-38.2308,-407.777	0/1:73:39,34:39:1396:34:1203:-86.36,0,-103.958	0/1:110:57,53:57:2044:53:1868:-135.281,0,-151.118	0/0:177:177,0:177:6279:0:0:0,-53.2823,-565.196	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/0:69:68,1:68:2429:1:36:0,-17.1728,-215.266	0/1:82:35,47:35:1239:47:1667:-125.002,0,-87.1292	0/1:88:48,40:48:1724:40:1412:-100.872,0,-128.955	0/1:84:30,54:30:1080:54:1912:-146.802,0,-72.2267	0/0:142:142,0:142:5040:0:0:0,-42.7463,-453.747	0/0:94:94,0:94:3372:0:0:0,-28.2968,-303.695
chr03	24495456	.	C	T	494527	PASS	AB=0.493717;ABP=5.16588;AC=157;AF=0.835106;AN=188;AO=18431;CIGAR=1X;DP=21665;DPB=21665;DPRA=0;EPP=40025.4;EPPR=7019.04;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9173;MQMR=59.9985;NS=94;NUMALT=1;ODDS=6.57786;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=654691;QR=114714;RO=3231;RPL=13536;RPP=8799.99;RPPR=1742.93;RPR=4895;RUN=1;SAF=13536;SAP=8799.99;SAR=4895;SRF=2420;SRP=1742.93;SRR=811;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:100:53,47:53:1896:47:1645:-118.23,0,-140.815	1/1:327:2,325:2:72:325:11584:-1035.57,-91.6001,0	0/1:287:153,134:153:5431:134:4767:-342.765,0,-402.526	1/1:442:0,442:0:0:442:15736:-1415.94,-133.055,0	1/1:152:3,149:3:108:149:5298:-466.863,-35.6814,0	1/1:118:0,118:0:0:118:4177:-375.922,-35.5215,0	1/1:278:2,276:2:68:276:9791:-874.673,-77.2286,0	1/1:490:5,485:5:180:485:17201:-1531.19,-130.953,0	1/1:292:1,291:1:36:291:10288:-922.169,-84.3025,0	0/1:319:199,120:199:7023:120:4287:-289.979,0,-536.112	1/1:127:1,126:1:36:126:4477:-399.502,-34.6325,0	1/1:187:0,187:0:0:187:6652:-598.636,-56.2926,0	1/1:181:0,181:0:0:181:6432:-578.919,-54.4864,0	1/1:204:0,204:0:0:204:7217:-649.574,-61.4101,0	1/1:154:0,154:0:0:154:5427:-488.561,-46.3586,0	0/1:158:87,71:87:3112:71:2544:-181.646,0,-232.744	0/1:144:70,74:70:2495:74:2636:-194.138,0,-181.453	1/1:140:0,140:0:0:140:4959:-446.461,-42.1442,0	0/1:75:40,35:40:1420:35:1252:-90.4078,0,-105.52	1/1:319:0,319:0:0:319:11364:-1022.6,-96.0286,0	1/1:379:2,377:2:54:377:13385:-1199.22,-108.961,0	1/1:181:2,179:2:68:179:6337:-563.965,-48.0287,0	1/1:319:0,319:0:0:319:11352:-1021.55,-96.0286,0	0/1:305:113,192:113:4022:192:6780:-518.439,0,-270.355	1/1:256:1,255:1:36:255:9014:-807.581,-73.4654,0	0/1:796:380,416:380:13546:416:14791:-1090.94,0,-979.311	1/1:501:0,501:0:0:501:17878:-1608.61,-150.816,0	0/1:74:35,39:35:1248:39:1392:-103.303,0,-90.3486	1/1:452:0,452:0:0:452:16099:-1448.59,-136.066,0	1/1:281:19,262:19:665:262:9292:-775.996,-24.4166,0	1/1:289:1,287:1:36:287:10231:-917.158,-83.4132,0	0/1:20:10,10:10:360:10:356:-26.3606,0,-26.7237	0/1:28:6,22:6:216:22:792:-63.1768,0,-11.3617	1/1:10:0,10:0:0:10:351:-31.9267,-3.0103,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:32:0,32:0:0:32:1135:-102.458,-9.63296,0	1/1:429:0,429:0:0:429:15310:-1377.61,-129.142,0	1/1:477:1,476:1:36:476:16940:-1520.47,-139.993,0	0/1:133:76,57:76:2674:57:2040:-143.834,0,-200.867	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:262:133,129:133:4711:129:4590:-334.387,0,-345.282	1/1:68:0,68:0:0:68:2403:-216.525,-20.47,0	0/1:382:183,199:183:6477:199:7051:-519.663,0,-468.027	0/1:197:86,111:86:3045:111:3935:-295.04,0,-214.977	1/1:134:0,134:0:0:134:4788:-431.074,-40.338,0	1/1:317:0,317:0:0:317:11251:-1012.48,-95.4265,0	1/1:194:0,194:0:0:194:6889:-620.074,-58.3998,0	1/1:416:1,414:1:36:414:14678:-1316.38,-121.614,0	1/1:346:0,345:0:0:345:12228:-1100.11,-103.855,0	0/1:284:143,141:143:5103:141:4998:-364.475,0,-373.922	1/1:392:0,392:0:0:392:13883:-1249.23,-118.004,0	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	0/1:225:97,128:97:3423:128:4541:-341.129,0,-240.553	1/1:222:0,222:0:0:222:7887:-709.859,-66.8287,0	0/1:37:14,23:14:500:23:816:-62.6236,0,-34.1981	0/1:281:158,123:158:5593:123:4357:-307.717,0,-418.906	1/1:171:0,171:0:0:171:6049:-544.515,-51.4761,0	0/1:22:13,9:13:464:9:297:-20.4276,0,-35.4748	0/1:66:33,33:33:1171:33:1172:-85.9195,0,-85.8287	1/1:288:0,288:0:0:288:10233:-920.748,-86.6966,0	1/1:193:1,192:1:36:192:6794:-607.937,-54.5005,0	1/1:20:0,20:0:0:20:699:-63.2325,-6.0206,0	1/1:470:0,470:0:0:470:16792:-1510.9,-141.484,0	1/1:489:1,488:1:36:488:17357:-1558.12,-143.605,0	1/1:122:0,122:0:0:122:4312:-388.245,-36.7257,0	1/1:164:0,164:0:0:164:5810:-522.999,-49.3689,0	1/1:420:0,420:0:0:420:14943:-1344.05,-126.433,0	0/1:307:192,115:192:6776:115:4106:-277.307,0,-517.502	1/1:69:0,69:0:0:69:2464:-222.01,-20.7711,0	1/1:189:0,189:0:0:189:6676:-600.918,-56.8947,0	1/1:184:1,183:1:36:183:6510:-582.381,-51.7912,0	1/1:95:0,95:0:0:95:3368:-303.334,-28.5979,0	0/1:335:131,204:131:4645:204:7257:-552.335,0,-317.37	1/1:199:0,199:0:0:199:7037:-633.388,-59.905,0	1/1:488:0,488:0:0:488:17292:-1555.86,-146.903,0	1/1:320:0,320:0:0:320:11409:-1026.67,-96.3296,0	0/1:354:194,160:194:6862:160:5673:-404.119,0,-511.089	1/1:248:2,246:2:72:246:8718:-777.672,-67.8187,0	0/1:45:19,26:19:672:26:928:-70.2919,0,-47.2605	0/1:208:126,82:126:4516:82:2912:-199.702,0,-343.993	1/1:225:0,225:0:0:225:8003:-720.289,-67.7318,0	1/1:498:0,498:0:0:498:17630:-1586.33,-149.913,0	1/1:217:2,215:2:72:215:7672:-683.674,-58.4868,0	0/1:192:94,98:94:3380:98:3503:-257.678,0,-246.617	0/1:206:99,107:99:3501:107:3788:-279.101,0,-253.29	1/1:311:0,311:0:0:311:11032:-992.746,-93.6203,0	1/1:79:0,79:0:0:79:2811:-253.227,-23.7814,0	1/1:143:0,143:0:0:143:5069:-456.334,-43.0473,0	1/1:161:0,161:0:0:161:5743:-516.984,-48.4658,0	0/1:105:59,46:59:2107:46:1635:-115.83,0,-158.29	0/1:183:80,103:80:2846:103:3636:-272.333,0,-201.289	0/1:157:107,50:107:3796:50:1770:-112.314,0,-294.577	1/1:231:0,231:0:0:231:8203:-737.492,-69.5379,0	1/1:242:0,242:0:0:242:8596:-773.477,-72.8493,0
chr03	24505101	.	CTTTAT	CTTTAC,CTTAC	328316	PASS	AB=0.503463,0.489372;ABP=3.44646,7.11831;AC=157,31;AF=0.835106,0.164894;AN=188;AO=12650,2060;CIGAR=5M1X,1M1D3M1X;DP=14775;DPB=14430.2;DPRA=0,0.886618;EPP=27203.5,4467.56;EPPR=13.8677;GTI=0;LEN=1,5;MEANALT=1.96809,2.56098;MQM=59.9636,58.5932;MQMR=60;NS=94;NUMALT=2;ODDS=1.43925;PAIRED=0,0;PAIREDR=0;PAO=1.5,1.5;PQA=54,54;PQR=0;PRO=0;QA=452317,73068;QR=175;RO=5;RPL=31,1;RPP=27203.5,4467.56;RPPR=13.8677;RPR=12619,2059;RUN=1,1;SAF=12650,2060;SAP=27472.1,4476.24;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:108:0,57,50:0:0:57,50:2014,1763:-307.523,-143.505,-126.346,-164.05,0,-148.998	1/1:235:0,234,0:0:0:234,0:8396,0:-755.272,-70.441,0,-755.272,-70.441,-755.272	1/2:227:0,120,106:0:0:120,106:4264,3760:-653.18,-305.775,-269.652,-347.402,0,-315.493	1/1:404:0,403,0:0:0:403,0:14405,0:-1295.88,-121.315,0,-1295.88,-121.315,-1295.88	1/1:125:0,124,0:0:0:124,0:4443,0:-399.68,-37.3277,0,-399.68,-37.3277,-399.68	1/1:97:0,97,0:0:0:97,0:3455,0:-311.163,-29.1999,0,-311.163,-29.1999,-311.163	1/1:356:0,356,0:0:0:356,0:12665,0:-1139.68,-107.167,0,-1139.68,-107.167,-1139.68	1/1:241:0,241,0:0:0:241,0:8609,0:-774.796,-72.5482,0,-774.796,-72.5482,-774.796	1/1:211:0,208,2:0:0:208,2:7439,65:-669.267,-62.6142,0,-664.025,-57.296,-663.423	1/2:199:0,97,101:0:0:97,101:3472,3556:-572.563,-289.426,-260.226,-283.132,0,-252.728	1/1:124:0,124,0:0:0:124,0:4456,0:-401.209,-37.3277,0,-401.209,-37.3277,-401.209	1/1:108:0,108,0:0:0:108,0:3872,0:-348.673,-32.5112,0,-348.673,-32.5112,-348.673	1/1:97:0,97,0:0:0:97,0:3480,0:-313.411,-29.1999,0,-313.411,-29.1999,-313.411	1/1:161:0,161,0:0:0:161,0:5724,0:-515.278,-48.4658,0,-515.278,-48.4658,-515.278	1/1:109:0,108,0:0:0:108,0:3880,0:-349.029,-32.5112,0,-349.029,-32.5112,-349.029	1/2:96:0,48,46:0:0:48,46:1716,1632:-272.807,-132.887,-118.437,-139.94,0,-126.093	1/2:151:0,87,63:0:0:87,63:3115,2252:-437.44,-183.411,-157.221,-254.034,0,-235.069	1/1:98:0,98,0:0:0:98,0:3524,0:-317.368,-29.5009,0,-317.368,-29.5009,-317.368	1/2:59:0,29,29:0:0:29,29:1044,1037:-169.636,-84.4497,-75.7198,-85.1926,0,-76.4627	1/1:355:0,354,0:0:0:354,0:12669,0:-1139.67,-106.565,0,-1139.67,-106.565,-1139.67	1/1:244:0,242,0:0:0:242,0:8644,0:-777.637,-72.8493,0,-777.637,-72.8493,-777.637	1/1:131:0,131,0:0:0:131,0:4695,0:-422.709,-39.4349,0,-422.709,-39.4349,-422.709	1/1:178:0,177,1:0:0:177,1:6302,26:-567.013,-53.2823,0,-564.974,-50.9835,-564.673	1/2:196:0,107,89:0:0:107,89:3829,3181:-571.796,-259.567,-227.357,-312.587,0,-285.795	1/1:153:0,152,0:0:0:152,0:5420,0:-487.592,-45.7566,0,-487.592,-45.7566,-487.592	1/2:408:1,216,190:1:36:216,190:7736,6693:-1172.49,-541.897,-479.812,-627.953,0,-573.695	1/1:354:0,353,0:0:0:353,0:12591,0:-1132.72,-106.264,0,-1132.72,-106.264,-1132.72	1/2:47:0,20,27:0:0:20,27:710,970:-137.333,-79.4842,-73.4636,-58.2056,0,-50.0778	1/1:434:0,427,0:0:0:427,0:15300,0:-1376.37,-128.54,0,-1376.37,-128.54,-1376.37	1/1:183:1,181,1:1:36:181,1:6439,36:-575.996,-51.549,0,-573.36,-51.549,-575.996	1/1:227:0,226,0:0:0:226,0:8050,0:-724.16,-68.0328,0,-724.16,-68.0328,-724.16	1/2:8:0,4,4:0:0:4,4:144,144:-23.8592,-12.1095,-10.9054,-12.1095,0,-10.9054	1/2:26:0,9,17:0:0:9,17:324,603:-75.9211,-49.4825,-46.7733,-26.7966,0,-21.6791	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:18:0,18,0:0:0:18,0:633,0:-57.2951,-5.41854,0,-57.2951,-5.41854,-57.2951	1/1:20:0,20,0:0:0:20,0:707,0:-63.9546,-6.0206,0,-63.9546,-6.0206,-63.9546	1/1:223:0,222,0:0:0:222,0:7946,0:-714.312,-66.8287,0,-714.312,-66.8287,-714.312	1/1:190:0,190,0:0:0:190,0:6814,0:-613.324,-57.1957,0,-613.324,-57.1957,-613.324	1/2:104:0,51,53:0:0:51,53:1832,1893:-304.065,-154.615,-139.262,-149.808,0,-133.854	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/2:218:0,106,112:0:0:106,112:3785,3998:-634.809,-326.245,-294.336,-308.921,0,-275.205	1/1:62:0,60,1:0:0:60,1:2151,36:-193.502,-18.0618,0,-190.564,-15.1194,-190.263	1/2:203:0,112,89:0:0:112,89:3979,3163:-581.897,-257.67,-223.955,-324.271,0,-297.479	1/2:112:0,55,56:0:0:55,56:1968,1985:-322.116,-161.662,-145.105,-160.463,0,-143.605	1/1:80:0,80,0:0:0:80,0:2872,0:-258.714,-24.0824,0,-258.714,-24.0824,-258.714	1/1:159:0,159,0:0:0:159,0:5686,0:-511.859,-47.8638,0,-511.859,-47.8638,-511.859	1/1:204:0,203,1:0:0:203,1:7272,36:-654.172,-61.1091,0,-651.236,-57.8136,-650.935	1/1:228:0,228,0:0:0:228,0:8129,0:-731.621,-68.6348,0,-731.621,-68.6348,-731.621	1/1:173:0,172,0:0:0:172,0:6128,0:-551.418,-51.7772,0,-551.418,-51.7772,-551.418	1/2:233:0,131,102:0:0:131,102:4708,3601:-677.614,-293.527,-254.092,-384.443,0,-353.738	1/1:211:0,211,0:0:0:211,0:7543,0:-678.908,-63.5173,0,-678.908,-63.5173,-678.908	1/1:10:0,10,0:0:0:10,0:359,0:-32.6536,-3.0103,0,-32.6536,-3.0103,-32.6536	1/2:184:0,91,92:0:0:91,92:3241,3276:-530.909,-266.747,-239.353,-264.238,0,-236.543	1/1:100:0,99,0:0:0:99,0:3539,0:-318.351,-29.802,0,-318.351,-29.802,-318.351	1/2:19:0,6,13:0:0:6,13:216,468:-56.1488,-38.5243,-36.7181,-17.9843,0,-14.0709	1/2:266:0,139,120:0:0:139,120:4964,423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chr03	24726378	.	T	C	149710	PASS	AB=0.468578;ABP=24.8444;AC=158;AF=0.840426;AN=188;AO=6878;CIGAR=1X;DP=8246;DPB=8246;DPRA=0;EPP=14903.7;EPPR=2958.39;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9849;MQMR=59.9949;NS=94;NUMALT=1;ODDS=1.66807;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=244214;QR=48704;RO=1365;RPL=4;RPP=14903.7;RPPR=2958.39;RPR=6874;RUN=1;SAF=0;SAP=14938.4;SAR=6878;SRF=0;SRP=2967.07;SRR=1365;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:25:15,10:15:536:10:352:-24.4924,0,-41.0491	1/1:112:0,112:0:0:112:3963:-356.863,-33.7154,0	0/1:88:47,41:47:1669:41:1460:-105.205,0,-124.005	1/1:72:0,72:0:0:72:2579:-232.359,-21.6742,0	1/1:91:1,90:1:36:90:3228:-287.143,-23.7955,0	1/1:54:0,54:0:0:54:1927:-173.706,-16.2556,0	1/1:86:0,86:0:0:86:3069:-276.438,-25.8886,0	1/1:125:0,125:0:0:125:4401:-396.263,-37.6288,0	1/1:57:0,57:0:0:57:2025:-182.521,-17.1587,0	0/1:111:61,50:61:2176:50:1775:-126.618,0,-162.692	1/1:82:0,82:0:0:82:2923:-263.305,-24.6845,0	1/1:78:0,78:0:0:78:2759:-248.54,-23.4803,0	1/1:77:0,77:0:0:77:2736:-246.481,-23.1793,0	1/1:103:0,103:0:0:103:3626:-326.55,-31.0061,0	1/1:80:0,80:0:0:80:2851:-256.828,-24.0824,0	0/1:51:26,25:26:928:25:870:-63.2612,0,-68.4857	0/1:85:31,54:31:1116:54:1892:-144.968,0,-75.1641	1/1:80:0,80:0:0:80:2798:-252.06,-24.0824,0	0/1:71:31,40:31:1116:40:1423:-106.994,0,-79.3786	1/1:180:1,179:1:36:179:6383:-570.962,-50.5871,0	1/1:111:0,111:0:0:111:3933:-354.162,-33.4143,0	1/1:98:0,98:0:0:98:3464:-311.971,-29.5009,0	1/1:19:0,19:0:0:19:675:-61.077,-5.71957,0	0/1:100:51,49:51:1809:49:1756:-128.221,0,-132.98	1/1:68:0,68:0:0:68:2406:-216.796,-20.47,0	0/1:290:168,122:168:6003:122:4333:-302.844,0,-453.077	1/1:155:0,153:0:0:153:5439:-489.282,-46.0576,0	0/1:55:21,34:21:756:34:1212:-92.8297,0,-51.8106	1/1:250:0,250:0:0:250:8953:-805.749,-75.2575,0	1/1:122:9,113:9:324:113:4013:-331.853,-7.21981,0	1/1:74:0,74:0:0:74:2628:-236.766,-22.2762,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:22:11,11:11:396:11:392:-28.9974,0,-29.3601	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:15:0,15:0:0:15:521:-47.2163,-4.51545,0	1/1:25:0,25:0:0:25:887:-80.1481,-7.52575,0	1/1:220:0,220:0:0:220:7770:-699.342,-66.2266,0	1/1:153:0,153:0:0:153:5439:-489.639,-46.0576,0	0/1:144:77,67:77:2752:67:2386:-171.648,0,-204.574	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:98:59,39:59:2120:39:1404:-97.1583,0,-161.568	1/1:68:0,68:0:0:68:2414:-217.515,-20.47,0	0/1:111:71,40:71:2514:40:1428:-95.4032,0,-193.098	0/1:60:24,36:24:855:36:1256:-95.2754,0,-59.2084	1/1:72:0,72:0:0:72:2553:-230.013,-21.6742,0	1/1:50:0,50:0:0:50:1769:-159.491,-15.0515,0	1/1:103:0,103:0:0:103:3652:-328.885,-31.0061,0	1/1:141:0,141:0:0:141:5022:-452.127,-42.4452,0	1/1:88:0,88:0:0:88:3134:-282.284,-26.4906,0	0/1:131:73,58:73:2596:58:2012:-141.865,0,-194.455	1/1:93:0,93:0:0:93:3322:-299.197,-27.9958,0	1/1:31:0,31:0:0:31:1096:-98.9477,-9.33193,0	0/1:146:71,75:71:2512:75:2672:-196.773,0,-182.381	1/1:52:0,52:0:0:52:1850:-166.707,-15.6536,0	0/1:26:12,14:12:428:14:496:-37.1475,0,-31.032	0/1:92:53,39:53:1904:39:1387:-97.4334,0,-143.943	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.57002	0/1:34:20,14:20:707:14:500:-35.1012,0,-53.7196	1/1:84:0,84:0:0:84:2990:-269.332,-25.2865,0	1/1:142:0,142:0:0:142:5004:-450.515,-42.7463,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:115:0,115:0:0:115:4073:-366.757,-34.6185,0	1/1:152:0,152:0:0:152:5426:-488.469,-45.7566,0	1/1:78:0,78:0:0:78:2770:-249.54,-23.4803,0	1/1:62:0,62:0:0:62:2212:-199.345,-18.6639,0	1/1:65:0,65:0:0:65:2299:-207.17,-19.567,0	0/1:146:104,42:104:3711:42:1500:-91.3442,0,-290.242	1/1:51:0,51:0:0:51:1797:-162.011,-15.3525,0	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	1/1:97:0,97:0:0:97:3443:-310.085,-29.1999,0	1/1:23:0,23:0:0:23:806:-72.8582,-6.92369,0	0/1:53:22,31:22:779:31:1104:-83.716,0,-54.4775	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:132:0,132:0:0:132:4664:-419.925,-39.736,0	1/1:184:0,184:0:0:184:6582:-592.46,-55.3895,0	0/1:101:58,43:58:2071:43:1507:-105.516,0,-156.256	1/1:119:1,118:1:36:118:4198:-374.404,-32.2243,0	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:132:43,89:43:1536:89:3183:-246.957,0,-98.7971	1/1:82:0,82:0:0:82:2924:-263.396,-24.6845,0	1/1:180:0,180:0:0:180:6356:-572.134,-54.1854,0	1/1:131:0,131:0:0:131:4626:-416.505,-39.4349,0	1/1:70:0,70:0:0:70:2485:-223.902,-21.0721,0	0/1:72:38,34:38:1359:34:1220:-88.4326,0,-100.936	1/1:155:0,155:0:0:155:5520:-496.928,-46.6597,0	1/1:37:0,37:0:0:37:1307:-117.931,-11.1381,0	1/1:89:0,89:0:0:89:3156:-284.267,-26.7917,0	1/1:85:0,84:0:0:84:2988:-268.9,-25.2865,0	0/1:97:48,49:48:1707:49:1725:-126.333,0,-124.715	0/1:130:80,50:80:2860:50:1780:-121.349,0,-218.504	0/1:59:32,27:32:1140:27:963:-69.2252,0,-85.1484	1/1:65:0,65:0:0:65:2280:-205.458,-19.567,0	1/1:101:0,101:0:0:101:3596:-323.848,-30.404,0
chr03	24726421	.	G	A	23325	PASS	AB=0.526193;ABP=18.3673;AC=30;AF=0.159574;AN=188;AO=1368;CIGAR=1X;DP=8450;DPB=8450;DPRA=0.940131;EPP=2973.58;EPPR=15374.9;GTI=1;LEN=1;MEANALT=1.08824;MQM=59.9751;MQMR=59.9904;NS=94;NUMALT=1;ODDS=0.170724;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=49045;QR=253931;RO=7079;RPL=1368;RPP=2973.58;RPPR=15374.9;RPR=0;RUN=1;SAF=0;SAP=2973.58;SAR=1368;SRF=0;SRP=15374.9;SRR=7079;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:26:10,16:10:360:16:549:-41.9057,0,-24.9175	0/0:116:116,0:116:4164:0:0:0,-34.9195,-374.941	0/1:90:44,46:44:1576:46:1652:-121.876,0,-115.039	0/0:78:78,0:78:2800:0:0:0,-23.4803,-252.24	0/0:93:91,1:91:3260:1:36:0,-24.4563,-290.022	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/0:128:128,0:128:4584:0:0:0,-38.5318,-412.725	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/1:112:51,61:51:1836:61:2180:-162.751,0,-131.805	0/0:84:84,0:84:2995:0:0:0,-25.2865,-269.782	0/0:83:83,0:83:2966:0:0:0,-24.9855,-267.086	0/0:80:80,0:80:2876:0:0:0,-24.0824,-259.076	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.318	0/0:82:82,0:82:2948:0:0:0,-24.6845,-265.553	0/1:51:25,26:25:900:26:936:-69.2069,0,-65.9685	0/1:85:54,31:54:1932:31:1112:-74.8038,0,-148.569	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/1:74:43,31:43:1535:31:1097:-76.7618,0,-116.166	0/0:183:183,0:183:6588:0:0:0,-55.0885,-592.996	0/0:113:113,0:113:4056:0:0:0,-34.0164,-365.226	0/0:100:100,0:100:3580:0:0:0,-30.103,-322.407	0/0:22:21,1:21:752:1:36:0,-3.02438,-64.408	0/1:102:50,52:50:1792:52:1864:-137.328,0,-130.857	0/0:72:72,0:72:2588:0:0:0,-21.6742,-233.168	0/1:295:121,173:121:4344:173:6212:-470.461,0,-302.42	0/0:162:162,0:162:5828:0:0:0,-48.7669,-524.629	0/1:55:35,20:35:1260:20:720:-48.5721,0,-97.1488	0/0:257:257,0:257:9232:0:0:0,-77.3647,-830.845	0/0:124:115,9:115:4120:9:324:0,-7.82186,-341.478	0/0:79:79,0:79:2824:0:0:0,-23.7814,-254.399	0/1:7:6,1:6:212:1:36:-1.49107,0,-17.3176	0/1:22:11,11:11:396:11:396:-29.3601,0,-29.3601	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:220:220,0:220:7916:0:0:0,-66.2266,-712.459	0/0:161:161,0:161:5772:0:0:0,-48.4658,-519.594	0/1:145:68,77:68:2439:77:2764:-205.352,0,-176.115	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:99:40,59:40:1428:59:2124:-161.626,0,-99.0156	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/1:111:39,72:39:1400:72:2588:-199.749,0,-92.8849	0/1:60:37,23:37:1332:23:828:-56.7823,0,-102.121	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.282	0/0:105:105,0:105:3752:0:0:0,-31.6081,-337.881	0/0:145:145,0:145:5184:0:0:0,-43.6493,-466.701	0/0:89:89,0:89:3189:0:0:0,-26.7917,-287.231	0/1:137:63,74:63:2252:74:2641:-196.694,0,-161.702	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.528	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/1:144:72,71:72:2588:71:2540:-185.444,0,-189.761	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.058	0/1:26:14,12:14:500:12:432:-31.3944,0,-37.5094	0/1:92:38,54:38:1364:54:1944:-147.541,0,-95.366	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:32:14,18:14:504:18:640:-48.2964,0,-36.0651	0/0:90:90,0:90:3216:0:0:0,-27.0927,-289.663	0/0:147:147,0:147:5268:0:0:0,-44.2514,-474.256	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:121:121,0:121:4324:0:0:0,-36.4246,-389.337	0/0:155:155,0:155:5544:0:0:0,-46.6596,-499.085	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.834	0/0:65:65,0:65:2340:0:0:0,-19.5669,-210.859	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.972	0/1:149:45,104:45:1616:104:3710:-289.088,0,-100.877	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.528	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:53:33,20:33:1172:20:716:-48.8131,0,-89.8329	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:140:140,0:140:5016:0:0:0,-42.1442,-451.586	0/0:186:186,0:186:6680:0:0:0,-55.9916,-601.188	0/1:104:46,58:46:1652:58:2084:-156.523,0,-117.661	0/0:121:120,1:120:4308:1:36:0,-32.8264,-384.297	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:135:92,43:92:3308:43:1544:-98.614,0,-257.298	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/0:183:183,0:183:6568:0:0:0,-55.0885,-591.199	0/0:133:133,0:133:4768:0:0:0,-40.037,-429.277	0/0:73:73,0:73:2628:0:0:0,-21.9752,-236.766	0/1:72:34,38:34:1224:38:1368:-101.747,0,-88.7929	0/0:160:160,0:160:5740:0:0:0,-48.1648,-516.715	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:92:92,0:92:3312:0:0:0,-27.6948,-298.297	0/0:87:87,0:87:3123:0:0:0,-26.1896,-281.295	0/1:97:49,48:49:1756:48:1728:-126.605,0,-129.124	0/1:134:54,80:54:1932:80:2876:-218.738,0,-133.819	0/1:58:26,32:26:928:32:1152:-86.5304,0,-66.3785	0/0:69:69,0:69:2464:0:0:0,-20.7711,-222.014	0/0:102:102,0:102:3660:0:0:0,-30.7051,-329.603
chr03	24962803	.	AGCC	GGCC,GGCT	361264	PASS	AB=0.458014,0.53702;ABP=70.8426,55.7452;AC=154,34;AF=0.819149,0.180851;AN=188;AO=10665,2391;CIGAR=1X3M,1X2M1X;DP=13145;DPB=13152.5;DPRA=0,0.992699;EPP=23057.7,5186.32;EPPR=16.0391;GTI=0;LEN=1,4;MEANALT=2.20213,2.63636;MQM=59.9134,59.4931;MQMR=60;NS=94;NUMALT=2;ODDS=5.98646;PAIRED=0,0;PAIREDR=0;PAO=14.5,15;PQA=300,332;PQR=0;PRO=0.5;QA=377957,83363;QR=180;RO=6;RPL=4838,1022;RPP=202.163,112.364;RPPR=8.80089;RPR=5827,1369;RUN=1,1;SAF=4850,1023;SAP=192.615,111.107;SAR=5815,1368;SRF=1;SRP=8.80089;SRR=5;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:92:0,53,37:0:0:53,37:1896,1293:-259.665,-105.054,-89.0996,-154.618,0,-143.48	1/1:229:0,227,1:0:0:227,1:8023,36:-721.718,-68.3338,0,-718.781,-65.3964,-718.479	1/2:156:0,55,100:0:0:55,100:1968,3462:-441.909,-281.425,-264.869,-160.633,0,-130.53	1/1:293:0,290,0:0:0:290,0:10310,0:-927.464,-87.2987,0,-927.464,-87.2987,-927.464	1/1:118:0,114,2:0:0:114,2:4068,71:-365.967,-34.3174,0,-360.182,-28.5148,-359.58	1/1:91:0,91,0:0:0:91,0:3212,0:-289.029,-27.3937,0,-289.029,-27.3937,-289.029	1/1:129:0,126,0:0:0:126,0:4439,0:-399.364,-37.9298,0,-399.364,-37.9298,-399.364	1/1:227:0,226,0:0:0:226,0:7917,0:-712.2,-68.0328,0,-712.2,-68.0328,-712.2	1/1:177:0,177,0:0:0:177,0:6210,0:-558.9,-53.2823,0,-558.9,-53.2823,-558.9	1/2:197:0,93,104:0:0:93,104:3305,3652:-566.762,-297.445,-269.449,-269.611,0,-238.304	1/1:107:0,106,1:0:0:106,1:3761,36:-338.199,-31.9092,0,-335.262,-28.6119,-334.961	1/1:153:0,153,0:0:0:153,0:5410,0:-487.032,-46.0576,0,-487.032,-46.0576,-487.032	1/1:134:0,133,0:0:0:133,0:4706,0:-423.241,-40.037,0,-423.241,-40.037,-423.241	1/1:96:0,95,0:0:0:95,0:3343,0:-300.607,-28.5979,0,-300.607,-28.5979,-300.607	1/1:144:0,143,0:0:0:143,0:5076,0:-456.666,-43.0473,0,-456.666,-43.0473,-456.666	1/2:135:1,70,64:1:28:70,64:2496,2216:-380.478,-177.309,-158.454,-201.323,0,-184.274	1/2:91:0,50,41:0:0:50,41:1788,1449:-264.133,-118.337,-103.285,-146.151,0,-133.809	1/1:111:0,111,0:0:0:111,0:3901,0:-351.286,-33.4143,0,-351.286,-33.4143,-351.286	1/2:108:0,55,53:0:0:55,53:1956,1843:-309.576,-150.168,-133.611,-159.759,0,-143.804	1/1:278:0,275,0:0:0:275,0:9798,0:-881.408,-82.7833,0,-881.408,-82.7833,-881.408	1/1:214:0,210,0:0:0:210,0:7448,0:-670.003,-63.2163,0,-670.003,-63.2163,-670.003	1/2:65:0,20,45:0:0:20,45:705,1575:-185.889,-128.488,-122.467,-57.7522,0,-44.2058	1/1:164:1,160,0:1:35:160,0:5693,0:-508.899,-45.3296,0,-509.2,-48.1648,-512.048	1/2:195:0,122,73:0:0:122,73:4325,2548:-559.762,-207.483,-170.758,-352.629,0,-330.654	1/1:114:0,114,0:0:0:114,0:4052,0:-364.867,-34.3174,0,-364.867,-34.3174,-364.867	1/2:393:0,189,203:0:0:189,203:6670,7056:-1116.52,-573.383,-516.489,-543.127,0,-482.018	1/1:278:0,278,0:0:0:278,0:9805,0:-882.129,-83.6863,0,-882.129,-83.6863,-882.129	1/2:74:0,36,38:0:0:36,38:1288,1345:-214.914,-109.883,-99.0458,-105.387,0,-93.9474	1/1:202:0,200,1:0:0:200,1:7125,36:-640.943,-60.206,0,-638.005,-57.2686,-637.704	1/1:110:0,109,0:0:0:109,0:3844,0:-345.943,-32.8123,0,-345.943,-32.8123,-345.943	1/1:161:0,151,0:0:0:151,0:5367,0:-482.81,-45.4555,0,-482.81,-45.4555,-482.81	1/2:17:0,6,11:0:0:6,11:208,386:-48.668,-31.7631,-29.9569,-17.2529,0,-13.9416	1/2:20:0,13,7:0:0:13,7:468,251:-58.9667,-20.8076,-16.8942,-38.5177,0,-36.4105	1/1:10:0,10,0:0:0:10,0:351,0:-31.9267,-3.0103,0,-31.9267,-3.0103,-31.9267	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:23:0,23,0:0:0:23,0:820,0:-74.1225,-6.92369,0,-74.1225,-6.92369,-74.1225	1/1:347:0,346,0:0:0:346,0:12258,0:-1102.77,-104.156,0,-1102.77,-104.156,-1102.77	1/1:147:0,145,0:0:0:145,0:5118,0:-460.434,-43.6494,0,-460.434,-43.6494,-460.434	1/2:108:0,39,69:0:0:39,69:1371,2393:-306.415,-194.818,-183.078,-111.946,0,-91.1754	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:153:0,77,76:0:0:77,76:2764,2723:-447.892,-222.428,-199.249,-225.822,0,-202.944	1/1:76:0,76,0:0:0:76,0:2690,0:-242.341,-22.8783,0,-242.341,-22.8783,-242.341	1/2:263:0,112,149:0:0:112,149:3953,5203:-744.887,-423.124,-389.408,-321.726,0,-276.872	1/2:218:0,104,113:0:0:104,113:3695,3926:-620.117,-319.155,-287.848,-300.953,0,-266.936	1/1:114:0,113,0:0:0:113,0:4033,0:-362.926,-34.0164,0,-362.926,-34.0164,-362.926	1/1:125:0,125,0:0:0:125,0:4443,0:-400.041,-37.6288,0,-400.041,-37.6288,-400.041	1/1:128:0,128,0:0:0:128,0:4517,0:-406.698,-38.5318,0,-406.698,-38.5318,-406.698	1/1:165:0,164,0:0:0:164,0:5834,0:-524.752,-49.3689,0,-524.752,-49.3689,-524.752	1/1:131:0,131,0:0:0:131,0:4610,0:-414.958,-39.4349,0,-414.958,-39.4349,-414.958	1/2:165:0,72,91:0:0:72,91:2580,3198:-470.712,-260.294,-238.62,-210.452,0,-183.058	1/1:165:0,165,0:0:0:165,0:5852,0:-526.721,-49.67,0,-526.721,-49.67,-526.721	1/1:9:0,9,0:0:0:9,0:320,0:-29.1424,-2.70927,0,-29.1424,-2.70927,-29.1424	1/2:149:0,59,90:0:0:59,90:2116,3121:-426.522,-253.928,-236.167,-172.948,0,-145.855	1/1:79:0,78,1:0:0:78,1:2776,36:-249.734,-23.4803,0,-246.902,-20.3007,-246.601	1/2:7:0,1,6:0:0:1,6:36,216:-20.9217,-17.9843,-17.6833,-3.29724,0,-1.49106	1/2:186:0,82,104:0:0:82,104:2909,3602:-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chr03	25277847	.	AA	CA	309755	PASS	AB=0.485078;ABP=11.1757;AC=154;AF=0.819149;AN=188;AO=11131;CIGAR=1X1M;DP=13353;DPB=13353.5;DPRA=0;EPP=36.2855;EPPR=1235.15;GTI=1;LEN=1;MEANALT=1.24468;MQM=59.9731;MQMR=59.9712;NS=94;NUMALT=1;ODDS=2.26188;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18;PQR=0;PRO=0;QA=397013;QR=74689;RO=2191;RPL=5359;RPP=36.2855;RPPR=1235.15;RPR=5772;RUN=1;SAF=11131;SAP=24173.7;SAR=0;SRF=2191;SRP=4760.71;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:29:14,15:14:482:15:528:-39.1215,0,-34.9757	1/1:193:0,193:0:0:193:6906:-621.606,-58.0988,0	0/1:137:90,47:90:3081:47:1653:-107.814,0,-236.275	1/1:256:0,256:0:0:256:9126:-821.232,-77.0637,0	1/1:133:2,130:2:59:130:4617:-410.087,-34.4376,0	1/1:141:0,141:0:0:141:5035:-453.292,-42.4452,0	0/1:149:87,62:87:2993:62:2206:-153.95,0,-224.746	1/1:245:0,245:0:0:245:8740:-786.474,-73.7524,0	1/1:103:0,103:0:0:103:3648:-328.524,-31.0061,0	0/1:122:71,51:71:2388:51:1828:-128.075,0,-178.4	1/1:72:0,72:0:0:72:2579:-232.359,-21.6742,0	1/1:83:0,83:0:0:83:2962:-266.812,-24.9855,0	1/1:96:0,96:0:0:96:3428:-308.732,-28.8989,0	1/1:117:0,117:0:0:117:4167:-375.2,-35.2205,0	1/1:85:0,85:0:0:85:3033:-273.199,-25.5876,0	0/1:87:39,47:39:1370:47:1680:-125.239,0,-97.3477	0/1:104:49,55:49:1669:55:1944:-143.926,0,-119.182	1/1:90:1,89:1:36:89:3153:-280.395,-23.4944,0	0/1:71:42,29:42:1429:29:1022:-70.9177,0,-107.523	1/1:269:1,265:1:23:265:9432:-846.475,-78.0274,0	1/1:215:0,215:0:0:215:7676:-690.747,-64.7215,0	0/1:180:110,70:110:3759:70:2499:-170.977,0,-284.325	1/1:58:0,57:0:0:57:2039:-183.422,-17.1587,0	0/1:112:58,54:58:1971:54:1917:-138.863,0,-143.94	1/1:94:0,94:0:0:94:3372:-303.695,-28.2968,0	0/1:452:236,216:236:7996:216:7677:-554.904,0,-583.622	1/1:288:0,286:0:0:286:10185:-916.286,-86.0946,0	0/1:45:19,26:19:611:26:932:-70.6525,0,-41.7465	1/1:414:1,413:1:32:413:14742:-1323.32,-121.427,0	1/1:203:8,194:8:265:194:6908:-597.612,-36.9921,0	1/1:172:0,171:0:0:171:6103:-549.129,-51.4761,0	0/1:14:3,11:3:102:11:392:-31.4056,0,-5.30231	0/1:68:18,50:18:583:50:1778:-139.831,0,-32.3058	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:16:0,16:0:0:16:563:-50.9998,-4.81648,0	1/1:44:0,44:0:0:44:1558:-140.51,-13.2453,0	1/1:254:1,252:1:36:252:9003:-806.65,-72.9221,0	1/1:331:0,330:0:0:330:11781:-1059.79,-99.3399,0	0/1:92:50,42:50:1690:42:1508:-108.32,0,-124.682	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	0/1:213:98,115:98:3271:115:4077:-302.997,0,-230.488	1/1:64:0,63:0:0:63:2249:-202.307,-18.9649,0	0/1:174:93,81:93:3260:81:2887:-207.687,0,-241.241	0/1:82:40,42:40:1344:42:1498:-110.429,0,-96.5625	1/1:79:0,78:0:0:78:2790:-250.423,-23.4803,0	1/1:98:0,98:0:0:98:3491:-314.402,-29.5009,0	1/1:229:0,229:0:0:229:8175:-735.762,-68.9359,0	1/1:319:1,318:1:23:318:11357:-1019.52,-93.7287,0	1/1:184:0,184:0:0:184:6564:-590.842,-55.3895,0	1/1:257:0,256:0:0:256:9136:-821.966,-77.0637,0	1/1:192:0,192:0:0:192:6858:-617.29,-57.7978,0	1/1:39:0,39:0:0:39:1404:-126.659,-11.7402,0	0/1:218:99,119:99:3372:119:4240:-316.155,0,-238.071	1/1:124:1,123:1:25:123:4412:-394.751,-34.8279,0	0/1:55:30,20:30:1008:20:720:-49.7334,0,-75.63	0/1:229:118,111:118:4090:111:3966:-288.194,0,-299.351	1/1:48:0,48:0:0:48:1728:-155.805,-14.4494,0	0/1:13:4,9:4:140:9:324:-25.5925,0,-9.0314	0/1:28:18,10:18:634:10:360:-24.3155,0,-48.9583	1/1:101:0,101:0:0:101:3611:-325.196,-30.404,0	1/1:155:0,155:0:0:155:5527:-497.554,-46.6597,0	0/1:17:5,12:5:178:12:428:-33.7413,0,-11.2511	1/1:351:0,351:0:0:351:12528:-1127.08,-105.662,0	0/1:216:73,143:73:2533:143:5120:-395.92,0,-162.97	1/1:146:0,146:0:0:146:5224:-470.297,-43.9504,0	1/1:162:0,160:0:0:160:5711:-513.746,-48.1648,0	1/1:183:5,178:5:163:178:6363:-557.757,-40.1465,0	0/1:251:164,87:164:5594:87:3094:-203.129,0,-428.034	1/1:41:0,41:0:0:41:1437:-129.623,-12.3422,0	1/1:89:0,89:0:0:89:3188:-287.144,-26.7917,0	1/1:131:0,131:0:0:131:4685:-421.809,-39.4349,0	1/1:27:0,27:0:0:27:950:-85.8125,-8.12781,0	0/1:146:68,78:68:2307:78:2775:-206.041,0,-163.935	1/1:85:0,85:0:0:85:3020:-272.03,-25.5876,0	1/1:188:1,187:1:36:187:6655:-595.433,-52.9954,0	1/1:297:2,295:2:59:295:10533:-942.283,-83.8021,0	0/1:222:94,128:94:3153:128:4522:-340.292,0,-217.166	1/1:177:1,176:1:36:176:6286:-562.236,-49.684,0	0/1:31:21,10:21:707:10:360:-23.4124,0,-54.6089	0/1:217:113,104:113:3953:104:3706:-268.419,0,-290.639	1/1:142:0,141:0:0:141:5019:-451.499,-42.4452,0	1/1:343:0,343:0:0:343:12273:-1104.41,-103.253,0	1/1:129:0,129:0:0:129:4599:-414.076,-38.8329,0	1/1:79:1,78:1:34:78:2783:-247.312,-20.3825,0	0/1:93:40,52:40:1326:52:1856:-139.265,0,-91.5718	1/1:179:0,177:0:0:177:6345:-570.832,-53.2823,0	0/1:42:23,18:23:802:18:640:-45.2275,0,-59.7952	1/1:98:0,98:0:0:98:3491:-314.369,-29.5009,0	1/1:92:0,92:0:0:92:3283:-295.69,-27.6948,0	0/1:85:44,41:44:1509:41:1455:-105.658,0,-110.51	0/1:152:77,75:77:2649:75:2688:-196.408,0,-192.896	0/1:76:57,18:57:1908:18:641:-35.0824,0,-149.052	1/1:173:0,170:0:0:170:6054:-544.64,-51.1751,0	1/1:127:0,127:0:0:127:4499:-405.077,-38.2308,0
chr03	25277880	.	A	G	28200.8	PASS	AB=0.498538;ABP=3.07379;AC=31;AF=0.164894;AN=188;AO=1726;CIGAR=1X;DP=12364;DPB=12364;DPRA=0.886169;EPP=3716.31;EPPR=23055.4;GTI=2;LEN=1;MEANALT=1;MQM=59.9635;MQMR=59.9747;NS=94;NUMALT=1;ODDS=4.39543;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60998;QR=376816;RO=10636;RPL=1722;RPP=3716.31;RPPR=23046.7;RPR=4;RUN=1;SAF=1726;SAP=3750.97;SAR=0;SRF=10635;SRP=23090.1;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:29:16,13:16:572:13:464:-33.3676,0,-43.0836	0/0:173:173,0:173:6136:0:0:0,-52.0782,-552.347	0/1:124:45,79:45:1584:79:2820:-216.712,0,-105.523	0/0:247:247,0:247:8766:0:0:0,-74.3544,-788.85	0/0:130:130,0:130:4583:0:0:0,-39.1339,-412.635	0/0:139:139,0:139:4900:0:0:0,-41.8432,-441.153	0/1:144:63,81:63:2252:81:2854:-213.751,0,-159.595	0/0:239:239,0:239:8516:0:0:0,-71.9462,-766.305	0/0:103:102,1:102:3628:1:36:0,-27.4078,-323.129	0/1:121:51,70:51:1805:70:2488:-187.705,0,-126.305	0/0:71:71,0:71:2510:0:0:0,-21.3731,-226.152	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.759	0/0:88:88,0:88:3144:0:0:0,-26.4906,-283.186	0/0:111:111,0:111:3951:0:0:0,-33.4143,-355.654	0/0:82:82,0:82:2890:0:0:0,-24.6845,-260.338	0/1:82:45,37:45:1595:37:1312:-93.6972,0,-119.155	0/1:97:51,46:51:1804:46:1636:-118.329,0,-133.442	0/0:83:83,0:83:2952:0:0:0,-24.9855,-265.915	0/1:71:30,41:30:1060:41:1460:-110.323,0,-74.3381	0/0:263:263,0:263:9314:0:0:0,-79.1709,-838.237	0/0:208:208,0:208:7351:0:0:0,-62.6142,-661.592	0/1:77:69,8:69:2440:8:284:-2.72404,0,-196.675	0/0:54:54,0:54:1916:0:0:0,-16.2556,-172.717	0/1:103:50,53:50:1771:53:1877:-138.201,0,-128.666	0/0:91:91,0:91:3216:0:0:0,-27.3937,-289.663	0/0:216:209,7:209:7343:7:252:0,-41.9935,-637.903	0/0:284:284,0:284:10052:0:0:0,-85.4925,-904.627	0/1:42:26,16:26:932:16:555:-37.6328,0,-71.5556	0/0:389:389,0:389:13799:0:0:0,-117.101,-1241.7	0/0:187:181,6:181:6362:6:203:0,-37.6914,-554.078	0/0:165:165,0:165:5844:0:0:0,-49.6699,-525.705	0/1:14:11,3:11:383:3:108:-5.86075,0,-30.5888	0/1:61:47,14:47:1663:14:478:-24.9813,0,-131.594	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:15:15,0:15:524:0:0:0,-4.51545,-47.4896	0/0:40:40,0:40:1420:0:0:0,-12.0412,-128.097	0/0:249:249,0:249:8836:0:0:0,-74.9565,-795.235	0/0:312:312,0:312:11047:0:0:0,-93.9214,-994.136	0/1:84:36,48:36:1292:48:1712:-129.079,0,-91.2972	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:199:104,95:104:3690:95:3360:-242.711,0,-272.399	0/0:62:62,0:62:2202:0:0:0,-18.6639,-198.44	0/1:165:78,87:78:2743:87:3074:-227.22,0,-197.442	0/1:79:41,38:41:1464:38:1347:-97.7481,0,-108.275	0/0:74:74,0:74:2617:0:0:0,-22.2762,-235.777	0/0:93:93,0:93:3260:0:0:0,-27.9958,-293.624	0/0:213:213,0:213:7560:0:0:0,-64.1194,-680.446	0/0:303:303,0:303:10746:0:0:0,-91.2121,-966.281	0/0:179:179,0:179:6340:0:0:0,-53.8844,-570.697	0/0:246:246,0:246:8715:0:0:0,-74.0534,-784.348	0/0:184:182,0:182:6503:0:0:0,-54.7875,-584.995	0/0:37:37,0:37:1312:0:0:0,-11.1381,-118.382	0/1:200:104,96:104:3700:96:3432:-248.888,0,-272.998	0/0:117:117,0:117:4139:0:0:0,-35.2205,-372.695	0/1:49:22,27:22:788:27:956:-71.6053,0,-56.4943	0/1:216:109,107:109:3846:107:3730:-270.884,0,-281.318	0/0:45:45,0:45:1590:0:0:0,-13.5463,-143.389	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:98:98,0:98:3445:0:0:0,-29.5009,-310.266	0/0:147:147,0:147:5236:0:0:0,-44.2514,-471.378	0/1:17:12,5:12:432:5:171:-10.6079,0,-34.1037	0/0:340:340,0:340:12069:0:0:0,-102.35,-1085.59	0/1:213:140,73:140:4956:73:2547:-165.338,0,-382.074	0/0:135:135,0:135:4763:0:0:0,-40.639,-428.832	0/0:160:160,0:160:5661:0:0:0,-48.1648,-509.613	0/0:172:167,5:167:5889:5:180:0,-35.2251,-513.572	0/1:239:81,158:81:2871:158:5563:-428.848,0,-186.682	0/0:37:37,0:37:1286:0:0:0,-11.1381,-116.039	0/0:83:83,0:83:2960:0:0:0,-24.9855,-266.634	0/0:126:126,0:126:4454:0:0:0,-37.9298,-401.035	0/0:22:22,0:22:780:0:0:0,-6.62266,-70.523	0/1:131:69,62:69:2468:62:2196:-158.471,0,-182.939	0/0:74:74,0:74:2632:0:0:0,-22.2762,-237.128	0/0:180:180,0:180:6376:0:0:0,-54.1854,-573.936	0/0:288:287,1:287:10137:1:32:0,-83.4973,-909.078	0/1:208:118,90:118:4196:90:3184:-224.173,0,-315.02	0/0:161:161,0:161:5728:0:0:0,-48.4658,-515.642	0/1:29:7,22:7:248:22:784:-62.154,0,-13.9343	0/1:204:97,107:97:3402:107:3777:-278.722,0,-244.987	0/0:129:128,1:128:4548:1:36:0,-35.2346,-405.892	0/0:337:337,0:337:11937:0:0:0,-101.447,-1074.2	0/0:130:130,0:130:4617:0:0:0,-39.1339,-415.696	0/0:74:74,0:74:2624:0:0:0,-22.2762,-236.406	0/1:88:49,39:49:1718:39:1354:-95.6651,0,-128.413	0/0:170:170,0:170:6006:0:0:0,-51.1751,-540.651	0/1:39:17,22:17:608:22:780:-58.7829,0,-43.3119	0/0:94:94,0:94:3356:0:0:0,-28.2968,-302.068	0/0:87:87,0:87:3096:0:0:0,-26.1896,-278.869	0/1:82:40,42:40:1394:42:1468:-107.727,0,-101.068	0/1:142:70,72:70:2492:72:2564:-188.264,0,-181.787	0/1:71:17,54:17:600:54:1924:-152.064,0,-32.9561	0/0:155:155,0:155:5501:0:0:0,-46.6596,-495.22	0/0:127:127,0:127:4450:0:0:0,-38.2308,-400.677
chr03	25373560	.	CTTTTTTATTATTCTG	CTTTTTATTATTCTG	27796.1	PASS	AB=0.481399;ABP=13.8351;AC=36;AF=0.191489;AN=188;AO=1755;CIGAR=1M1D14M;DP=12432;DPB=12320.9;DPRA=0.97302;EPP=3813.94;EPPR=22875.1;GTI=1;LEN=1;MEANALT=2.23404;MQM=59.9208;MQMR=59.9922;NS=94;NUMALT=1;ODDS=1.80018;PAIRED=0;PAIREDR=0;PAO=0.666667;PQA=16.6667;PQR=16.6667;PRO=0.666667;QA=61950;QR=365438;RO=10533;RPL=1755;RPP=3813.94;RPPR=22875.1;RPR=0;RUN=1;SAF=1755;SAP=3813.94;SAR=0;SRF=10533;SRP=22875.1;SRR=0;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:19,12:19:645:12:428:-29.513,0,-49.0361	0/0:214:210,0:210:7286:0:0:0,-63.2163,-655.521	0/1:151:83,67:83:2904:67:2380:-168.944,0,-216.089	0/0:375:367,0:367:12725:0:0:0,-110.478,-1144.84	0/0:25:25,0:25:873:0:0:0,-7.52575,-78.8875	0/0:32:32,0:32:1126:0:0:0,-9.63296,-101.649	0/1:125:44,80:44:1523:80:2811:-215.64,0,-99.7731	0/0:267:261,0:261:9052:0:0:0,-78.5688,-814.428	0/0:124:121,3:121:4221:3:108:0,-27.2525,-370.009	0/1:135:51,83:51:1770:83:2947:-224.765,0,-118.885	0/0:56:55,0:55:1878:0:0:0,-16.5566,-169.077	0/0:57:57,0:57:1989:0:0:0,-17.1587,-179.287	0/0:62:59,0:59:2021:0:0:0,-17.7608,-181.864	0/0:44:44,0:44:1528:0:0:0,-13.2453,-137.812	0/0:63:62,0:62:2167:0:0:0,-18.6639,-194.998	0/1:46:19,25:19:660:25:892:-67.0175,0,-46.142	0/1:58:30,27:30:1048:27:956:-68.847,0,-77.1214	0/0:78:77,0:77:2680:0:0:0,-23.1793,-241.092	0/1:42:22,20:22:762:20:694:-50.1371,0,-56.2538	0/0:329:322,5:322:11238:5:176:0,-82.5915,-995.174	0/0:244:239,0:239:8289:0:0:0,-71.9462,-745.757	0/1:151:37,113:37:1291:113:3992:-314.106,0,-71.1231	0/0:123:122,0:122:4199:0:0:0,-36.7257,-377.748	0/1:82:48,34:48:1662:34:1199:-83.5299,0,-125.181	0/0:88:86,0:86:2967:0:0:0,-25.8886,-266.941	0/1:540:299,238:299:10236:238:8356:-590.057,0,-759.272	0/0:345:343,0:343:11950:0:0:0,-103.253,-1075.05	0/1:38:20,16:20:694:16:563:-39.8298,0,-51.6142	0/0:495:493,0:493:17009:0:0:0,-148.408,-1530.29	0/0:105:99,0:99:3411:0:0:0,-29.802,-306.858	0/0:177:176,0:176:6078:0:0:0,-52.9813,-546.881	0/1:11:4,7:4:139:7:248:-19.3529,0,-9.54117	0/1:51:27,23:27:923:23:820:-58.7113,0,-67.9702	0/1:7:6,1:6:204:1:32:-1.0921,0,-16.5857	0/0:15:15,0:15:525:0:0:0,-4.51545,-47.5804	0/0:33:33,0:33:1161:0:0:0,-9.93399,-104.798	0/0:199:196,0:196:6832:0:0:0,-59.0019,-614.623	0/0:311:310,1:310:10757:1:36:0,-90.0225,-964.493	0/1:50:20,30:20:704:30:1072:-81.7348,0,-48.6332	0/0:4:4,0:4:141:0:0:0,-1.20412,-13.037	0/1:188:96,91:96:3312:91:3232:-234.451,0,-241.657	0/0:41:39,2:39:1367:2:72:0,-5.50551,-116.493	0/1:187:110,72:110:3806:72:2528:-172.634,0,-287.617	0/1:68:34,34:34:1184:34:1207:-88.4652,0,-86.3953	0/0:89:88,0:88:3013:0:0:0,-26.4906,-271.14	0/0:73:73,0:73:2512:0:0:0,-21.9752,-226.338	0/0:208:204,0:204:7046:0:0:0,-61.4101,-633.913	0/0:312:310,1:310:10681:1:32:0,-90.7609,-958.046	0/0:123:121,1:121:4216:1:36:0,-33.4322,-376.092	0/0:227:223,0:223:7789:0:0:0,-67.1297,-700.753	0/0:224:220,2:220:7629:2:72:0,-60.3043,-679.896	0/0:16:16,0:16:558:0:0:0,-4.81648,-50.5485	0/1:182:94,84:94:3284:84:2988:-215.209,0,-241.843	0/0:62:62,0:62:2128:0:0:0,-18.6639,-191.79	0/1:13:3,10:3:106:10:348:-27.7417,0,-5.97577	0/1:203:110,90:110:3819:90:3147:-222.943,0,-283.407	0/0:50:50,0:50:1736:0:0:0,-15.0515,-156.523	0/1:19:11,8:11:367:8:284:-20.1822,0,-27.6333	0/1:66:35,26:35:1213:26:928:-65.1295,0,-90.7665	0/0:78:77,0:77:2678:0:0:0,-23.1793,-240.988	0/0:97:97,0:97:3386:0:0:0,-29.1999,-304.964	0/1:24:14,10:14:480:10:347:-24.3346,0,-36.302	0/0:461:458,0:458:15842:0:0:0,-137.872,-1425.21	0/1:190:103,86:103:3551:86:3012:-214.168,0,-262.675	0/0:83:83,0:83:2852:0:0:0,-24.9855,-256.925	0/0:151:151,0:151:5232:0:0:0,-45.4555,-471.038	0/0:351:345,1:345:11967:1:36:0,-100.911,-1073.39	0/1:172:65,104:65:2251:104:3656:-278.021,0,-151.634	0/0:17:17,0:17:589:0:0:0,-5.11751,-53.3358	0/0:65:64,0:64:2215:0:0:0,-19.2659,-199.39	0/0:53:52,0:52:1804:0:0:0,-15.6536,-162.283	0/0:16:16,0:16:557:0:0:0,-4.81648,-50.4584	0/1:93:60,32:60:2100:32:1127:-73.7702,0,-161.306	0/1:100:53,46:53:1847:46:1632:-116.958,0,-136.3	0/0:257:254,0:254:8777:0:0:0,-76.4616,-789.705	0/0:336:335,1:335:11714:1:36:0,-97.5478,-1050.58	0/1:68:25,43:25:869:43:1507:-115.452,0,-58.0561	0/0:228:217,3:217:7572:3:108:0,-56.5027,-671.495	0/1:25:18,7:18:638:7:252:-15.5032,0,-50.2236	0/1:189:113,72:113:3890:72:2568:-175.339,0,-294.279	0/0:149:149,0:149:5155:0:0:0,-44.8535,-464.116	0/0:421:417,0:417:14518:0:0:0,-125.53,-1306.14	0/0:104:104,0:104:3609:0:0:0,-31.3071,-325.027	0/0:56:55,0:55:1936:0:0:0,-16.5566,-174.159	0/1:96:52,42:52:1810:42:1483:-105.168,0,-134.589	0/0:150:148,1:148:5181:1:36:0,-41.615,-462.849	0/1:31:21,9:21:733:9:300:-17.934,0,-56.9011	0/0:81:78,0:78:2707:0:0:0,-23.4803,-243.546	0/0:56:55,0:55:1920:0:0:0,-16.5566,-172.867	0/1:27:13,13:13:456:13:468:-34.2731,0,-33.1879	0/1:59:24,34:24:844:34:1204:-90.8467,0,-58.4605	0/1:84:36,45:36:1268:45:1594:-119.006,0,-89.6814	0/0:215:213,0:213:7418:0:0:0,-64.1194,-667.362	0/0:115:115,0:115:4038:0:0:0,-34.6184,-363.619
chr03	25388396	.	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chr03	25388438	.	T	G	156562	PASS	AB=0.467143;ABP=29.2665;AC=153;AF=0.81383;AN=188;AO=7226;CIGAR=1X;DP=8733;DPB=8733;DPRA=0;EPP=15694.1;EPPR=3245.04;GTI=0;LEN=1;MEANALT=1.05319;MQM=53.7328;MQMR=59.2318;NS=94;NUMALT=1;ODDS=2.37727;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=257213;QR=53796;RO=1501;RPL=7226;RPP=15694.1;RPPR=3245.04;RPR=0;RUN=1;SAF=0;SAP=15694.1;SAR=7226;SRF=0;SRP=3262.39;SRR=1501;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:25,13:25:900:13:464:-30.6166,0,-69.8819	1/1:122:0,121:0:0:121:4321:-387.933,-36.4246,0	0/1:69:32,37:32:1152:37:1326:-98.5762,0,-83.2191	1/1:232:0,231:0:0:231:8235:-738.416,-69.5379,0	1/1:65:0,65:0:0:65:2323:-208.699,-19.567,0	1/1:68:0,68:0:0:68:2407:-215.739,-20.47,0	0/1:148:75,72:75:2654:72:2569:-186.42,0,-193.932	1/1:159:0,159:0:0:159:5684:-510.041,-47.8638,0	1/1:54:0,52:0:0:52:1834:-164.826,-15.6536,0	0/1:73:32,41:32:1144:41:1472:-110.044,0,-81.2881	1/1:75:0,75:0:0:75:2680:-240.872,-22.5773,0	1/1:76:0,76:0:0:76:2685:-241.376,-22.8783,0	1/1:73:0,73:0:0:73:2605:-233.027,-21.9752,0	1/1:83:0,83:0:0:83:2952:-265.543,-24.9855,0	1/1:74:0,74:0:0:74:2631:-236.032,-22.2762,0	0/1:81:37,44:37:1328:44:1563:-116.394,0,-95.3489	0/1:65:35,30:35:1260:30:1076:-77.4942,0,-94.0971	1/1:98:0,98:0:0:98:3495:-313.757,-29.5009,0	0/1:78:47,31:47:1688:31:1103:-76.0078,0,-128.567	1/1:153:0,153:0:0:153:5472:-491.357,-46.0576,0	1/1:137:0,136:0:0:136:4843:-434.748,-40.9401,0	0/1:97:58,39:58:2053:39:1380:-95.0285,0,-155.713	1/1:38:0,38:0:0:38:1364:-122.797,-11.4391,0	0/1:88:52,36:52:1868:36:1292:-89.9301,0,-141.898	1/1:73:1,72:1:36:72:2551:-225.34,-18.3769,0	0/1:334:186,148:186:6646:148:5284:-374.254,0,-496.971	1/1:149:1,148:1:36:148:5240:-466.51,-41.2552,0	0/1:48:28,20:28:1004:20:716:-49.9741,0,-76.2115	1/1:246:0,246:0:0:246:8780:-788.887,-74.0534,0	1/1:114:3,111:3:108:111:3951:-345.118,-24.2423,0	1/1:101:0,101:0:0:101:3620:-324.836,-30.404,0	0/1:5:4,1:4:144:1:36:-2.08802,0,-11.8085	0/1:19:13,6:13:468:6:212:-13.6812,0,-36.7224	1/1:6:0,6:0:0:6:216:-19.7701,-1.80618,0	1/1:7:0,7:0:0:7:235:-21.4607,-2.10721,0	1/1:15:0,15:0:0:15:536:-48.5298,-4.51545,0	1/1:196:0,196:0:0:196:6966:-624.993,-59.0019,0	1/1:86:0,86:0:0:86:3072:-276.062,-25.8886,0	0/1:85:44,41:44:1584:41:1442:-104.277,0,-117.06	1/1:6:0,6:0:0:6:212:-19.3995,-1.80618,0	0/1:147:66,81:66:2368:81:2880:-214.522,0,-168.654	1/1:48:0,48:0:0:48:1712:-154.166,-14.4494,0	0/1:107:50,57:50:1800:57:2031:-150.254,0,-130.053	0/1:76:41,35:41:1472:35:1248:-89.3941,0,-109.07	1/1:71:0,71:0:0:71:2509:-225.69,-21.3731,0	1/1:79:0,79:0:0:79:2794:-251.035,-23.7814,0	1/1:101:0,101:0:0:101:3599:-323.118,-30.404,0	1/1:129:0,129:0:0:129:4590:-411.939,-38.8329,0	1/1:167:0,167:0:0:167:5952:-534.045,-50.272,0	1/1:136:0,136:0:0:136:4854:-435.298,-40.9401,0	1/1:158:0,158:0:0:158:5639:-506.571,-47.5627,0	1/1:24:0,24:0:0:24:856:-77.142,-7.22472,0	0/1:114:61,53:61:2175:53:1896:-136.133,0,-161.499	1/1:108:0,108:0:0:108:3860:-346.645,-32.5112,0	0/1:20:7,13:7:252:13:455:-35.2112,0,-17.0084	0/1:70:37,33:37:1328:33:1180:-85.0545,0,-98.6739	1/1:25:0,25:0:0:25:885:-79.6005,-7.52575,0	0/1:17:9,8:9:324:8:288:-21.1228,0,-24.385	0/1:27:17,10:17:608:10:352:-23.8542,0,-46.9209	1/1:91:0,91:0:0:91:3215:-288.899,-27.3937,0	1/1:111:2,109:2:72:109:3879:-341.725,-26.5841,0	0/1:4:2,2:2:72:2:72:-5.61958,0,-5.6326	1/1:234:0,234:0:0:234:8331:-748.691,-70.441,0	0/1:139:69,70:69:2480:70:2508:-182.784,0,-181.366	1/1:61:0,61:0:0:61:2160:-194.138,-18.3628,0	1/1:90:0,90:0:0:90:3215:-288.47,-27.0927,0	1/1:142:2,140:2:72:140:4935:-436.337,-35.9394,0	0/1:50:39,11:39:1392:11:396:-20.8643,0,-110.506	1/1:26:0,26:0:0:26:932:-83.961,-7.82678,0	1/1:85:0,85:0:0:85:2997:-269.364,-25.5876,0	1/1:109:0,109:0:0:109:3894:-349.992,-32.8123,0	1/1:24:0,24:0:0:24:843:-76.0811,-7.22472,0	0/1:125:63,62:63:2264:62:2215:-161.735,0,-166.35	0/1:69:29,40:29:1044:40:1423:-107.371,0,-73.4639	1/1:155:0,155:0:0:155:5512:-495.06,-46.6597,0	1/1:144:0,144:0:0:144:5103:-458.047,-43.3483,0	0/1:110:53,57:53:1904:57:2032:-149.658,0,-138.027	1/1:121:0,121:0:0:121:4306:-387.066,-36.4246,0	0/1:11:6,5:6:216:5:176:-12.8587,0,-16.1385	0/1:130:76,54:76:2736:54:1924:-133.951,0,-207.326	1/1:134:0,134:0:0:134:4779:-429.531,-40.338,0	1/1:210:0,210:0:0:210:7467:-670.444,-63.2163,0	1/1:92:0,92:0:0:92:3284:-295.05,-27.6948,0	1/1:50:0,50:0:0:50:1782:-160.334,-15.0515,0	0/1:81:38,43:38:1368:43:1536:-113.876,0,-99.025	1/1:126:0,126:0:0:126:4457:-400.22,-37.9298,0	0/1:30:19,11:19:684:11:387:-26.0208,0,-52.6687	1/1:57:0,57:0:0:57:2048:-184.09,-17.1587,0	1/1:70:0,70:0:0:70:2495:-224.585,-21.0721,0	0/1:68:30,38:30:1080:38:1343:-100.416,0,-76.1853	0/1:101:57,44:57:2040:44:1563:-110.358,0,-153.411	0/1:76:54,22:54:1936:22:766:-46.1049,0,-151.613	1/1:136:1,135:1:36:135:4781:-425.277,-37.3418,0	1/1:113:0,113:0:0:113:4032:-362.271,-34.0164,0
chr03	25690420	.	C	G	34634.8	PASS	AB=0.49274;ABP=4.93366;AC=37;AF=0.196809;AN=188;AO=2086;CIGAR=1X;DP=12246;DPB=12246;DPRA=0.874918;EPP=4532.7;EPPR=22047.8;GTI=1;LEN=1;MEANALT=1.08696;MQM=59.8859;MQMR=59.9836;NS=94;NUMALT=1;ODDS=3.1999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74536;QR=362641;RO=10152;RPL=0;RPP=4532.7;RPPR=22047.8;RPR=2086;RUN=1;SAF=2086;SAP=4532.7;SAR=0;SRF=10152;SRP=22047.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:116:71,45:71:2532:45:1604:-109.726,0,-193.212	0/0:89:89,0:89:3180:0:0:0,-26.7917,-286.355	0/1:244:122,122:122:4332:122:4357:-318.848,0,-316.604	0/0:379:379,0:379:13536:0:0:0,-114.09,-1218.03	0/0:67:67,0:67:2396:0:0:0,-20.169,-215.897	0/0:78:78,0:78:2776:0:0:0,-23.4803,-250.082	0/1:119:46,73:46:1644:73:2578:-196.443,0,-112.426	0/0:302:302,0:302:10772:0:0:0,-90.9111,-969.363	0/0:133:133,0:133:4756:0:0:0,-40.037,-428.198	0/1:100:43,57:43:1532:57:2048:-154.46,0,-108.07	0/0:108:108,0:108:3879:0:0:0,-32.5112,-349.303	0/0:107:107,0:107:3801:0:0:0,-32.2102,-342.289	0/0:103:102,0:102:3659:0:0:0,-30.7051,-329.153	0/0:84:84,0:84:3000:0:0:0,-25.2865,-270.232	0/0:88:88,0:88:3140:0:0:0,-26.4906,-282.827	0/1:65:38,27:38:1359:27:956:-66.7874,0,-103.043	0/1:40:22,18:22:792:18:644:-46.2469,0,-59.5645	0/0:49:48,1:48:1703:1:36:0,-11.1522,-149.957	0/1:34:18,16:18:640:16:568:-41.2168,0,-47.6943	0/0:140:139,1:139:4972:1:36:0,-38.5459,-443.945	0/0:216:216,0:216:7712:0:0:0,-65.0225,-694.116	0/1:122:42,80:42:1496:80:2848:-219.827,0,-98.2089	0/0:178:178,0:178:6364:0:0:0,-53.5833,-572.851	0/1:53:29,24:29:1032:24:849:-60.7732,0,-77.2389	0/0:94:94,0:94:3360:0:0:0,-28.2968,-302.127	0/1:364:186,178:186:6648:178:6366:-463.454,0,-488.825	0/0:231:229,0:229:8200:0:0:0,-68.9359,-737.653	0/1:30:17,13:17:612:13:464:-33.0666,0,-46.3825	0/0:389:389,0:389:13908:0:0:0,-117.101,-1251.5	0/0:208:203,4:203:7276:4:144:0,-49.3594,-641.577	0/0:204:201,3:201:7140:3:108:0,-51.3349,-632.59	0/1:14:6,8:6:212:8:288:-22.053,0,-15.2104	0/1:40:34,6:34:1220:6:216:-7.74931,0,-98.0656	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.056	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:194:194,0:194:6938:0:0:0,-58.3998,-624.486	0/0:219:219,0:219:7807:0:0:0,-65.9256,-702.664	0/1:83:39,44:39:1404:44:1568:-116.354,0,-101.674	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:222:131,91:131:4676:91:3229:-223.983,0,-354.174	0/0:53:53,0:53:1899:0:0:0,-15.9546,-171.187	0/1:323:156,166:156:5568:166:5933:-436.781,0,-403.954	0/1:62:27,35:27:968:35:1252:-94.3212,0,-68.7735	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/0:138:138,0:138:4924:0:0:0,-41.5421,-443.313	0/0:124:124,0:124:4444:0:0:0,-37.3277,-400.129	0/0:271:271,0:271:9672:0:0:0,-81.5791,-870.436	0/0:127:127,0:127:4532:0:0:0,-38.2308,-408.049	0/0:193:193,0:193:6904:0:0:0,-58.0988,-621.428	0/0:97:97,0:97:3464:0:0:0,-29.1999,-311.973	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/1:156:82,74:82:2928:74:2652:-191.965,0,-216.795	0/0:152:152,0:152:5448:0:0:0,-45.7566,-490.448	0/1:25:3,22:3:108:22:792:-64.0799,0,-2.54942	0/1:149:82,67:82:2928:67:2404:-171.762,0,-218.902	0/0:80:79,0:79:2804:0:0:0,-23.7814,-252.242	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:19:9,10:9:320:10:360:-27.0247,0,-23.4228	0/0:165:165,0:165:5876:0:0:0,-49.6699,-528.955	0/0:90:89,1:89:3174:1:36:0,-23.4944,-282.286	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	0/0:226:226,0:226:8080:0:0:0,-68.0328,-727.22	0/1:276:147,129:147:5240:129:4605:-331.403,0,-388.656	0/0:101:101,0:101:3612:0:0:0,-30.404,-325.286	0/0:119:119,0:119:4252:0:0:0,-35.8226,-382.86	0/0:262:260,2:260:9292:2:66:0,-72.6137,-829.98	0/1:224:86,138:86:3084:138:4944:-377.675,0,-210.357	0/0:51:50,1:50:1788:1:36:0,-11.7543,-157.604	0/0:91:91,0:91:3256:0:0:0,-27.3937,-293.261	0/0:59:59,0:59:2087:0:0:0,-17.7608,-188.1	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:203:97,106:97:3475:106:3789:-280.092,0,-251.851	0/1:106:60,46:60:2156:46:1648:-116.69,0,-162.398	0/0:316:316,0:316:11268:0:0:0,-95.1255,-1012.99	0/0:255:255,0:255:9108:0:0:0,-76.7626,-819.698	0/1:243:138,105:138:4944:105:3752:-264.723,0,-371.959	0/0:184:183,1:183:6572:1:36:0,-51.7912,-587.96	0/1:17:9,8:9:324:8:284:-20.784,0,-24.3883	0/1:176:113,63:113:4048:63:2256:-150.322,0,-311.526	0/0:128:128,0:128:4576:0:0:0,-38.5318,-412.006	0/0:196:193,2:193:6880:2:72:0,-52.224,-612.436	0/1:60:31,28:31:1092:28:1004:-72.5553,0,-80.4692	0/0:93:93,0:93:3319:0:0:0,-27.9958,-298.928	0/1:55:16,39:16:576:39:1396:-109.382,0,-35.6183	0/0:141:141,0:141:5047:0:0:0,-42.4452,-453.748	0/1:25:16,9:16:567:9:320:-21.6166,0,-43.835	0/0:72:72,0:72:2563:0:0:0,-21.6742,-230.92	0/0:97:97,0:97:3463:0:0:0,-29.1999,-311.882	0/1:113:55,58:55:1956:58:2072:-152.734,0,-142.299	0/1:231:124,107:124:4414:107:3840:-276.257,0,-327.896	0/1:66:20,46:20:720:46:1648:-128.741,0,-45.2608	0/0:211:211,0:211:7528:0:0:0,-63.5173,-677.565	0/0:111:111,0:111:3959:0:0:0,-33.4143,-356.502
chr03	25690426	.	C	T	34194.6	PASS	AB=0.490304;ABP=6.42113;AC=37;AF=0.196809;AN=188;AO=2068;CIGAR=1X;DP=12241;DPB=12241;DPRA=0.82175;EPP=4493.62;EPPR=22082.5;GTI=2;LEN=1;MEANALT=1;MQM=59.8472;MQMR=59.9826;NS=94;NUMALT=1;ODDS=1.59447;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73916;QR=363347;RO=10168;RPL=0;RPP=4493.62;RPPR=22082.5;RPR=2068;RUN=1;SAF=2068;SAP=4493.62;SAR=0;SRF=10168;SRP=22082.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:116:71,45:71:2535:45:1601:-109.454,0,-193.481	0/0:89:89,0:89:3171:0:0:0,-26.7917,-285.586	0/1:241:122,119:122:4376:119:4224:-307.789,0,-321.463	0/0:382:382,0:382:13628:0:0:0,-114.993,-1226.31	0/0:68:68,0:68:2424:0:0:0,-20.47,-218.416	0/0:77:77,0:77:2768:0:0:0,-23.1793,-249.361	0/1:116:45,71:45:1612:71:2552:-195.009,0,-110.45	0/0:310:309,0:309:11033:0:0:0,-93.0183,-992.46	0/0:133:133,0:133:4772:0:0:0,-40.037,-429.636	0/1:97:42,55:42:1496:55:1963:-147.733,0,-105.735	0/0:108:108,0:108:3845:0:0:0,-32.5112,-346.246	0/0:105:105,0:105:3733:0:0:0,-31.6081,-336.171	0/0:102:102,0:102:3647:0:0:0,-30.7051,-328.434	0/0:83:83,0:83:2953:0:0:0,-24.9855,-266.003	0/0:90:89,1:89:3184:1:36:0,-23.4944,-283.186	0/1:67:39,28:39:1392:28:1000:-70.143,0,-105.41	0/1:41:23,18:23:824:18:644:-45.9459,0,-62.1411	0/0:51:50,1:50:1788:1:36:0,-11.7543,-157.604	0/1:35:19,16:19:676:16:576:-41.6389,0,-50.6319	0/0:142:141,1:141:5044:1:36:0,-39.148,-450.471	0/0:217:217,0:217:7776:0:0:0,-65.3235,-699.87	0/1:122:43,79:43:1536:79:2836:-218.745,0,-101.807	0/0:181:181,0:181:6478:0:0:0,-54.4864,-583.104	0/1:52:30,22:30:1051:22:792:-55.9521,0,-79.2461	0/0:92:92,0:92:3279:0:0:0,-27.6948,-294.84	0/1:358:185,173:185:6624:173:6209:-451.136,0,-488.47	0/0:229:229,0:229:8178:0:0:0,-68.9359,-736.035	0/1:31:17,14:17:612:14:500:-36.0042,0,-46.0815	0/0:382:382,0:382:13675:0:0:0,-114.993,-1230.53	0/0:210:205,5:205:7301:5:180:0,-46.6642,-640.592	0/0:206:204,2:204:7270:2:72:0,-55.1755,-647.519	0/1:13:5,8:5:180:8:280:-21.6259,0,-12.6387	0/1:40:34,6:34:1208:6:216:-7.74931,0,-96.9849	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:41:40,1:40:1436:1:36:0,-8.74395,-125.939	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:194:194,0:194:6941:0:0:0,-58.3998,-624.754	0/0:215:215,0:215:7681:0:0:0,-64.7214,-691.325	0/1:83:40,43:40:1436:43:1544:-114.185,0,-104.552	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:218:130,88:130:4648:88:3122:-215.297,0,-352.858	0/0:53:53,0:53:1887:0:0:0,-15.9546,-170.108	0/1:324:156,168:156:5592:168:5968:-439.692,0,-405.868	0/1:62:26,36:26:936:36:1288:-97.5597,0,-65.8956	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/0:137:136,0:136:4864:0:0:0,-40.9401,-437.554	0/0:128:127,0:127:4539:0:0:0,-38.2308,-408.315	0/0:272:272,0:272:9756:0:0:0,-81.8802,-877.985	0/0:127:127,0:127:4544:0:0:0,-38.2308,-409.127	0/0:191:190,0:190:6816:0:0:0,-57.1957,-613.149	0/0:98:98,0:98:3512:0:0:0,-29.5009,-316.29	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/1:157:82,75:82:2907:75:2696:-195.621,0,-214.605	0/0:153:153,0:153:5472:0:0:0,-46.0576,-492.608	0/1:26:3,23:3:108:23:828:-67.0173,0,-2.24839	0/1:150:82,68:82:2936:68:2431:-173.891,0,-219.32	0/0:77:76,1:76:2703:1:36:0,-19.581,-239.916	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:20:9,11:9:320:11:383:-28.7826,0,-23.1218	0/0:166:166,0:166:5911:0:0:0,-49.971,-532.103	0/0:92:91,1:91:3259:1:36:0,-24.0965,-289.932	0/1:14:10,4:10:360:4:125:-7.3442,0,-28.5299	0/0:223:223,0:223:7983:0:0:0,-67.1297,-718.491	0/1:276:145,131:145:5187:131:4682:-338.348,0,-383.885	0/0:101:100,0:100:3588:0:0:0,-30.103,-322.766	0/0:123:123,0:123:4407:0:0:0,-37.0267,-396.801	0/0:264:262,2:262:9345:2:72:0,-72.6651,-834.197	0/1:218:87,131:87:3104:131:4677:-355.463,0,-213.964	0/0:51:50,1:50:1792:1:36:0,-11.7543,-157.964	0/0:91:91,0:91:3264:0:0:0,-27.3937,-293.98	0/0:58:58,0:58:2037:0:0:0,-17.4597,-183.601	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/1:202:96,106:96:3418:106:3768:-278.435,0,-247.025	0/1:107:60,47:60:2148:47:1680:-119.268,0,-161.377	0/0:317:317,0:317:11300:0:0:0,-95.4265,-1015.87	0/0:254:254,0:254:9079:0:0:0,-76.4616,-817.087	0/1:242:138,104:138:4944:104:3724:-261.567,0,-372.26	0/0:185:184,1:184:6576:1:36:0,-52.0923,-588.324	0/1:17:9,8:9:324:8:288:-21.1481,0,-24.3883	0/1:175:112,63:112:4007:63:2264:-151.342,0,-308.139	0/0:131:130,1:130:4632:1:36:0,-35.8367,-413.447	0/0:194:192,2:192:6851:2:72:0,-51.5631,-609.825	0/1:59:32,27:32:1134:27:972:-70.0371,0,-84.6065	0/0:91:91,0:91:3263:0:0:0,-27.3937,-293.889	0/1:54:16,38:16:576:38:1364:-106.805,0,-35.9194	0/0:140:140,0:140:4998:0:0:0,-42.1442,-449.341	0/1:23:14,9:14:491:9:324:-22.5822,0,-37.5974	0/0:74:74,0:74:2648:0:0:0,-22.2762,-238.567	0/0:97:97,0:97:3467:0:0:0,-29.1999,-312.242	0/1:112:56,56:56:2008:56:2003:-146.827,0,-147.278	0/1:231:125,106:125:4442:106:3808:-273.378,0,-330.415	0/1:67:21,46:21:731:46:1648:-128.44,0,-45.9414	0/0:215:215,0:215:7691:0:0:0,-64.7214,-692.224	0/0:113:113,0:113:4035:0:0:0,-34.0164,-363.338
chr03	25904443	.	C	T	32381	PASS	AB=0.601131;ABP=270.048;AC=40;AF=0.212766;AN=188;AO=1824;CIGAR=1X;DP=7667;DPB=7667;DPRA=0.994537;EPP=3963.78;EPPR=12686.6;GTI=2;LEN=1;MEANALT=1.02128;MQM=59.9764;MQMR=59.9707;NS=94;NUMALT=1;ODDS=1.13607;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65313;QR=207641;RO=5841;RPL=0;RPP=3963.78;RPPR=12686.6;RPR=1824;RUN=1;SAF=1824;SAP=3963.78;SAR=0;SRF=5841;SRP=12686.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:49:10,39:10:360:39:1391:-110.738,0,-17.9938	0/0:54:54,0:54:1920:0:0:0,-16.2556,-173.077	0/1:178:104,74:104:3660:74:2647:-184.893,0,-276.022	0/0:169:169,0:169:6029:0:0:0,-50.8741,-542.715	0/0:65:65,0:65:2316:0:0:0,-19.5669,-208.701	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/1:60:18,42:18:640:42:1496:-116.872,0,-39.8675	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/0:56:55,1:55:1939:1:36:0,-13.2594,-171.179	0/1:75:24,51:24:860:51:1813:-140.873,0,-55.1446	0/0:61:61,0:61:2160:0:0:0,-18.3628,-194.668	0/0:115:115,0:115:4054:0:0:0,-34.6184,-365.049	0/0:78:78,0:78:2757:0:0:0,-23.4803,-248.372	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.286	0/0:92:92,0:92:3267:0:0:0,-27.6948,-294.252	0/1:64:31,33:31:1103:33:1188:-87.9627,0,-80.3139	0/1:22:11,11:11:396:11:396:-29.3601,0,-29.3601	0/0:33:33,0:33:1175:0:0:0,-9.93399,-106.057	0/1:43:17,26:17:600:26:936:-71.6152,0,-41.3849	0/0:138:138,0:138:4932:0:0:0,-41.5421,-443.714	0/0:93:93,0:93:3303:0:0:0,-27.9958,-297.49	0/1:124:25,99:25:896:99:3548:-282.2,0,-43.6326	0/0:84:83,1:83:2954:1:36:0,-21.6882,-262.493	0/1:39:10,29:10:352:29:1036:-81.8091,0,-20.2762	0/0:51:51,0:51:1803:0:0:0,-15.3525,-162.551	0/1:209:85,124:85:3036:124:4439:-336.764,0,-210.555	0/0:158:158,0:158:5610:0:0:0,-47.5627,-505.026	0/1:31:10,21:10:343:21:756:-59.0353,0,-21.8686	0/0:191:191,0:191:6796:0:0:0,-57.4967,-611.714	0/0:140:135,5:135:4794:5:180:0,-25.5921,-415.067	0/0:62:62,0:62:2203:0:0:0,-18.6639,-198.535	0/1:12:10,2:10:352:2:72:-3.22436,0,-28.4058	0/1:27:14,13:14:500:13:468:-34.3318,0,-37.2084	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:192:192,0:192:6827:0:0:0,-57.7978,-614.503	0/0:83:83,0:83:2951:0:0:0,-24.9855,-265.824	0/1:56:33,23:33:1163:23:828:-57.9864,0,-88.1184	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:141:43,98:43:1536:98:3520:-274.563,0,-96.0879	0/0:42:42,0:42:1499:0:0:0,-12.6433,-135.204	0/1:179:71,108:71:2515:108:3861:-293.801,0,-172.718	0/1:66:21,45:21:748:45:1616:-125.862,0,-47.7773	0/0:74:74,0:74:2626:0:0:0,-22.2762,-236.587	0/0:82:82,0:82:2922:0:0:0,-24.6845,-263.214	0/0:91:91,0:91:3211:0:0:0,-27.3937,-289.205	0/0:134:134,0:134:4758:0:0:0,-40.338,-428.381	0/0:62:62,0:62:2211:0:0:0,-18.6639,-199.254	0/0:141:141,0:141:5034:0:0:0,-42.4452,-453.099	0/0:48:47,1:47:1684:1:36:0,-10.8512,-148.249	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:146:69,77:69:2446:77:2764:-205.051,0,-176.444	0/0:45:45,0:45:1595:0:0:0,-13.5463,-143.84	0/1:23:5,18:5:176:18:648:-51.7282,0,-9.26133	0/1:137:70,67:70:2504:67:2400:-175.008,0,-184.371	0/0:38:38,0:38:1346:0:0:0,-11.4391,-121.439	0/1:8:3,5:3:104:5:180:-14.1438,0,-7.29457	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	0/0:63:63,0:63:2243:0:0:0,-18.9649,-202.133	0/1:142:64,78:64:2272:78:2808:-210.21,0,-161.996	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:180:179,0:179:6366:0:0:0,-53.8844,-572.674	0/1:162:73,89:73:2595:89:3183:-237.927,0,-185.032	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/0:96:96,0:96:3405:0:0:0,-28.8989,-306.665	0/0:112:111,1:111:3932:1:36:0,-30.1171,-350.473	0/1:143:36,107:36:1292:107:3806:-299.689,0,-73.5365	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.771	0/0:46:46,0:46:1635:0:0:0,-13.8474,-147.438	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5035	0/1:135:34,101:34:1220:101:3599:-283.477,0,-69.4678	0/1:80:39,41:39:1400:41:1468:-108.334,0,-102.217	0/0:73:73,0:73:2603:0:0:0,-21.9752,-234.514	0/0:140:140,0:140:4999:0:0:0,-42.1442,-450.058	0/1:126:41,85:41:1447:85:3014:-233.559,0,-92.5954	0/0:94:94,0:94:3334:0:0:0,-28.2968,-300.279	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	0/1:82:40,42:40:1424:42:1512:-111.69,0,-103.771	0/0:108:108,0:108:3843:0:0:0,-32.5112,-346.068	0/0:116:115,1:115:4089:1:36:0,-31.3212,-364.598	0/1:54:24,30:24:864:30:1080:-81.2576,0,-61.8269	0/0:73:73,0:73:2590:0:0:0,-21.9752,-233.348	0/1:47:15,31:15:540:31:1112:-86.2036,0,-34.7482	0/0:125:124,1:124:4386:1:36:0,-34.0305,-391.317	0/1:30:11,19:11:392:19:684:-52.8594,0,-26.5892	0/0:80:80,0:80:2825:0:0:0,-24.0824,-254.481	0/0:91:91,0:91:3239:0:0:0,-27.3937,-291.724	0/1:55:27,28:27:951:28:1004:-74.1146,0,-69.3477	0/1:138:69,69:69:2443:69:2476:-181.549,0,-178.583	0/1:91:25,66:25:870:66:2376:-186.704,0,-51.2208	0/0:131:130,1:130:4582:1:36:0,-35.8367,-408.954	0/0:103:103,0:103:3674:0:0:0,-31.0061,-330.861
chr03	25904452	.	T	A	129144	PASS	AB=0.396477;ABP=283.107;AC=148;AF=0.787234;AN=188;AO=5889;CIGAR=1X;DP=7723;DPB=7723;DPRA=16.5978;EPP=12420;EPPR=3851.93;GTI=2;LEN=1;MEANALT=1.02151;MQM=59.954;MQMR=59.9596;NS=94;NUMALT=1;ODDS=1.01538;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=211075;QR=65496;RO=1832;RPL=43;RPP=12420;RPPR=3851.93;RPR=5846;RUN=1;SAF=5889;SAP=12790.8;SAR=0;SRF=1832;SRP=3981.15;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:40,10:40:1428:10:360:-17.6928,0,-113.766	1/1:52:0,52:0:0:52:1868:-168.399,-15.6536,0	0/1:175:72,103:72:2580:103:3668:-277.371,0,-179.769	1/1:169:0,169:0:0:169:6060:-545.502,-50.8741,0	1/1:67:0,67:0:0:67:2393:-215.626,-20.169,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:62:44,18:44:1567:18:648:-39.988,0,-122.43	1/1:78:0,78:0:0:78:2808:-252.959,-23.4803,0	1/1:55:1,54:1:21:54:1936:-172.408,-14.4567,0	0/1:77:53,24:53:1895:24:860:-54.5425,0,-147.648	1/1:63:0,63:0:0:63:2260:-203.663,-18.9649,0	1/1:117:0,117:0:0:117:4183:-376.652,-35.2205,0	1/1:82:0,82:0:0:82:2944:-265.193,-24.6845,0	1/1:76:0,76:0:0:76:2728:-245.763,-22.8783,0	1/1:95:0,95:0:0:95:3403:-306.484,-28.5979,0	0/1:64:33,31:33:1175:31:1112:-81.1254,0,-86.791	0/1:21:10,11:10:356:11:396:-29.6611,0,-26.0596	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	0/1:43:26,17:26:912:17:608:-42.1077,0,-69.4488	1/1:139:0,139:0:0:139:5000:-449.827,-41.8432,0	1/1:93:0,93:0:0:93:3344:-301.176,-27.9958,0	0/1:124:99,25:99:3517:25:900:-43.9933,0,-279.412	1/1:87:1,86:1:36:86:3072:-273.108,-22.5913,0	0/1:38:30,8:30:1080:8:288:-14.8283,0,-86.0695	1/1:54:0,54:0:0:54:1932:-174.157,-16.2556,0	0/1:211:125,86:125:4454:86:3084:-214.27,0,-337.513	1/1:156:0,155:0:0:155:5560:-500.163,-46.6597,0	0/1:31:21,10:21:752:10:360:-23.4124,0,-58.6743	1/1:195:0,195:0:0:195:7004:-630.417,-58.7009,0	1/1:142:6,136:6:216:136:4888:-420.279,-22.9557,0	1/1:63:0,63:0:0:63:2264:-204.022,-18.9649,0	0/1:12:2,10:2:72:10:360:-29.1319,0,-3.22436	0/1:27:14,13:14:504:13:468:-34.3318,0,-37.5703	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	1/1:194:0,194:0:0:194:6960:-626.407,-58.3998,0	1/1:86:0,86:0:0:86:3082:-277.579,-25.8886,0	0/1:54:21,33:21:743:33:1184:-90.6127,0,-50.9377	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:140:97,43:97:3461:43:1544:-97.1089,0,-269.557	1/1:42:0,42:0:0:42:1512:-136.375,-12.6433,0	0/1:182:108,74:108:3858:74:2644:-183.419,0,-292.627	0/1:67:45,22:45:1603:22:779:-50.2631,0,-124.39	1/1:77:0,77:0:0:77:2748:-247.527,-23.1793,0	1/1:84:0,84:0:0:84:2998:-270.048,-25.2865,0	1/1:94:0,94:0:0:94:3351:-301.806,-28.2968,0	1/1:133:0,133:0:0:133:4772:-429.636,-40.037,0	1/1:62:0,62:0:0:62:2223:-200.334,-18.6639,0	1/1:143:0,143:0:0:143:5107:-459.758,-43.0473,0	1/1:46:0,46:0:0:46:1656:-149.328,-13.8474,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:146:77,69:77:2763:69:2472:-178.783,0,-204.952	1/1:45:0,45:0:0:45:1608:-145.01,-13.5464,0	0/1:23:18,5:18:648:5:176:-9.26133,0,-51.7282	0/1:138:69,69:69:2468:69:2466:-180.651,0,-180.829	1/1:39:0,39:0:0:39:1375:-124.046,-11.7402,0	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	1/1:64:0,64:0:0:64:2296:-206.901,-19.2659,0	0/1:141:78,63:78:2789:63:2264:-161.577,0,-208.801	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:178:0,178:0:0:178:6392:-575.365,-53.5833,0	0/1:161:88,73:88:3139:73:2624:-187.941,0,-234.27	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	1/1:96:0,96:0:0:96:3448:-310.532,-28.8989,0	1/1:115:1,114:1:36:114:4094:-365.044,-31.0202,0	0/1:143:107,36:107:3848:36:1292:-73.5365,0,-303.467	1/1:65:0,65:0:0:65:2340:-210.85,-19.567,0	1/1:48:0,48:0:0:48:1724:-155.445,-14.4494,0	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	1/1:9:0,9:0:0:9:324:-29.5035,-2.70927,0	0/1:132:99,33:99:3547:33:1188:-67.4926,0,-279.702	0/1:79:41,38:41:1472:38:1360:-98.9192,0,-108.995	1/1:72:0,72:0:0:72:2577:-232.178,-21.6742,0	1/1:140:0,140:0:0:140:5006:-450.684,-42.1442,0	0/1:127:87,40:87:3080:40:1413:-89.2345,0,-239.193	1/1:94:0,94:0:0:94:3368:-303.336,-28.2968,0	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	0/1:81:42,39:42:1508:39:1404:-102.274,0,-111.631	1/1:107:0,107:0:0:107:3840:-345.795,-32.2102,0	1/1:117:1,116:1:36:116:4149:-369.993,-31.6222,0	0/1:53:29,24:29:1044:24:856:-61.4065,0,-78.3202	1/1:72:0,72:0:0:72:2588:-233.168,-21.6742,0	0/1:47:31,16:31:1116:16:565:-37.0288,0,-86.6033	1/1:125:1,124:1:36:124:4452:-397.251,-34.0305,0	0/1:31:20,11:20:720:11:396:-26.6508,0,-55.7968	1/1:83:0,83:0:0:83:2962:-266.811,-24.9855,0	1/1:96:0,96:0:0:96:3441:-309.901,-28.8989,0	0/1:55:29,26:29:1040:26:936:-68.0028,0,-77.3531	0/1:140:71,68:71:2556:68:2448:-178.371,0,-188.082	0/1:92:67,25:67:2412:25:894:-53.0854,0,-189.641	1/1:132:1,131:1:36:131:4689:-418.57,-36.1377,0	1/1:105:0,105:0:0:105:3757:-338.327,-31.6082,0
chr03	26147566	.	G	A	727.587	PASS	AB=0.33046;ABP=176.778;AC=28;AF=0.148936;AN=188;AO=246;CIGAR=1X;DP=4174;DPB=4174;DPRA=0.909562;EPP=537.193;EPPR=8528.21;GTI=15;LEN=1;MEANALT=1.05263;MQM=26.1545;MQMR=42.6544;NS=94;NUMALT=1;ODDS=0.110871;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8622;QR=138265;RO=3926;RPL=0;RPP=537.193;RPPR=8528.21;RPR=246;RUN=1;SAF=0;SAP=537.193;SAR=246;SRF=0;SRP=8528.21;SRR=3926;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:14:12,2:12:428:2:68:-0.594103,0,-33.13	0/0:28:28,0:28:996:0:0:0,-8.42884,-87.4821	0/1:28:23,5:23:794:5:180:-3.34121,0,-61.7809	0/0:34:34,0:34:1211:0:0:0,-10.235,-104.378	0/0:21:21,0:21:752:0:0:0,-6.32163,-66.5185	0/0:17:17,0:17:593:0:0:0,-5.11751,-52.613	0/1:26:20,6:20:701:6:216:-6.24611,0,-52.8469	0/0:72:72,0:72:2534:0:0:0,-21.6742,-223.216	0/0:46:46,0:46:1624:0:0:0,-13.8474,-141.558	0/1:20:15,5:15:531:5:176:-5.6981,0,-41.111	0/0:49:49,0:49:1729:0:0:0,-14.7505,-151.373	0/0:19:19,0:19:676:0:0:0,-5.71957,-59.8853	0/0:9:9,0:9:302:0:0:0,-2.70927,-27.0339	0/0:16:16,0:16:545:0:0:0,-4.81648,-48.3516	0/0:15:15,0:15:523:0:0:0,-4.51545,-45.8574	0/1:16:10,6:10:352:6:207:-9.06196,0,-26.598	0/1:13:2,11:2:72:11:392:-21.6229,0,-2.77653	0/0:10:10,0:10:351:0:0:0,-3.0103,-31.2843	0/1:24:17,7:17:589:7:239:-8.90603,0,-44.9793	0/0:55:55,0:55:1960:0:0:0,-16.5566,-172.301	0/0:53:53,0:53:1862:0:0:0,-15.9546,-163.39	0/1:28:17,11:17:599:11:392:-17.1075,0,-44.7204	0/0:34:34,0:34:1197:0:0:0,-10.235,-105.291	0/1:30:23,7:23:824:7:240:-7.19174,0,-63.8858	0/0:27:27,0:27:942:0:0:0,-8.12781,-81.1917	0/1:69:47,21:47:1662:21:721:-27.098,0,-122.445	0/0:76:76,0:76:2627:0:0:0,-22.8783,-229.436	0/1:4:2,2:2:72:2:63:-3.4559,0,-5.4858	0/0:78:78,0:78:2784:0:0:0,-23.4803,-244.315	0/0:26:25,1:25:871:1:36:0,-5.26807,-73.3052	0/0:52:52,0:52:1868:0:0:0,-15.6536,-164.905	0/0:204:203,1:203:7142:1:32:0,-58.9072,-625.378	0/0:65:63,2:63:2231:2:68:0,-14.7584,-190.024	0/0:153:153,0:153:5433:0:0:0,-46.0576,-477.056	0/0:184:184,0:184:6496:0:0:0,-55.3895,-568.906	0/0:83:83,0:83:2866:0:0:0,-24.9855,-251.63	0/0:54:54,0:54:1895:0:0:0,-16.2556,-166.266	0/1:48:30,18:30:1055:18:644:-27.8929,0,-78.1518	0/0:32:30,2:30:1037:2:72:0,-4.77142,-86.972	0/0:62:62,0:62:2162:0:0:0,-18.6639,-189.006	0/1:12:10,2:10:352:2:68:-1.19616,0,-27.7237	0/0:28:28,0:28:981:0:0:0,-8.42884,-86.0755	0/1:31:20,11:20:694:11:383:-15.8432,0,-52.3217	0/1:8:5,3:5:176:3:100:-4.65196,0,-13.097	0/0:10:10,0:10:348:0:0:0,-3.0103,-30.8241	0/0:16:16,0:16:572:0:0:0,-4.81648,-50.3132	0/0:31:31,0:31:1073:0:0:0,-9.33193,-94.9487	0/0:40:40,0:40:1386:0:0:0,-12.0412,-119.118	0/0:39:39,0:39:1361:0:0:0,-11.7402,-119.996	0/0:44:44,0:44:1564:0:0:0,-13.2453,-136.078	0/0:48:48,0:48:1711:0:0:0,-14.4494,-148.709	0/0:150:150,0:150:5283:0:0:0,-45.1545,-462.812	0/1:43:36,7:36:1296:7:252:-3.43143,0,-101.13	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.5443	0/0:110:109,1:109:3842:1:36:0,-30.3771,-334.635	0/1:16:13,3:13:453:3:104:-2.29581,0,-35.4391	0/0:12:12,0:12:424:0:0:0,-3.61236,-37.6751	0/0:98:98,0:98:3483:0:0:0,-29.5009,-304.19	0/0:212:207,5:207:7299:5:171:0,-51.9883,-623.873	0/0:20:20,0:20:716:0:0:0,-6.0206,-63.5211	0/1:29:14,15:14:476:15:536:-26.0179,0,-33.4986	0/0:109:109,0:109:3835:0:0:0,-32.8123,-337.722	0/0:61:61,0:61:2166:0:0:0,-18.3628,-188.802	0/1:35:23,12:23:806:12:432:-17.3539,0,-60.9183	0/0:28:28,0:28:980:0:0:0,-8.42884,-86.6958	0/0:31:31,0:31:1099:0:0:0,-9.33193,-97.1972	0/0:62:61,1:61:2163:1:36:0,-16.1052,-187.673	0/1:39:16,23:16:568:23:781:-41.066,0,-38.1796	0/0:22:22,0:22:756:0:0:0,-6.62266,-65.295	0/0:23:23,0:23:824:0:0:0,-6.92369,-73.0564	0/0:35:35,0:35:1214:0:0:0,-10.536,-107.455	0/0:144:144,0:144:5070:0:0:0,-43.3483,-444.453	0/1:39:31,8:31:1092:8:280:-6.83653,0,-84.0477	0/1:14:9,5:9:324:5:176:-7.50428,0,-24.6578	0/0:50:50,0:50:1722:0:0:0,-15.0515,-150.796	0/0:44:44,0:44:1571:0:0:0,-13.2453,-138.797	0/1:25:17,8:17:593:8:288:-11.1528,0,-45.0594	0/0:14:14,0:14:496:0:0:0,-4.21442,-43.5427	0/0:146:145,1:145:5136:1:36:0,-41.2142,-446.3	0/1:18:10,8:10:360:8:288:-13.26,0,-26.6226	0/0:16:16,0:16:576:0:0:0,-4.81648,-50.2665	0/0:103:103,0:103:3639:0:0:0,-31.0061,-319.048	0/1:28:17,11:17:593:11:392:-17.1075,0,-43.3124	0/0:12:12,0:12:415:0:0:0,-3.61236,-37.0502	0/0:11:10,1:10:320:1:21:0,-1.32983,-26.7596	0/0:34:34,0:34:1182:0:0:0,-10.235,-104.716	0/1:12:10,2:10:352:2:72:-1.24918,0,-27.0095	0/0:14:14,0:14:488:0:0:0,-4.21442,-43.1292	0/0:21:21,0:21:744:0:0:0,-6.32163,-65.5783	0/0:29:28,1:28:985:1:36:0,-6.17116,-83.9502	0/1:14:12,2:12:419:2:72:-0.647123,0,-32.8635	0/1:13:3,9:3:104:9:316:-17.0116,0,-5.63892	0/0:20:20,0:20:698:0:0:0,-6.0206,-61.8285	0/0:10:10,0:10:345:0:0:0,-3.0103,-30.7456
chr03	26147586	.	T	G	826.101	PASS	AB=0.341326;ABP=158.061;AC=28;AF=0.148936;AN=188;AO=257;CIGAR=1X;DP=4217;DPB=4217;DPRA=0.768593;EPP=561.079;EPPR=8550;GTI=15;LEN=1;MEANALT=1;MQM=26.0778;MQMR=42.6356;NS=94;NUMALT=1;ODDS=1.03329;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9145;QR=141885;RO=3960;RPL=0;RPP=561.079;RPPR=8550;RPR=257;RUN=1;SAF=0;SAP=561.079;SAR=257;SRF=0;SRP=8602.04;SRR=3960;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:14:12,2:12:432:2:72:-0.647123,0,-33.4517	0/0:28:28,0:28:993:0:0:0,-8.42884,-87.1558	0/1:29:23,6:23:828:6:216:-5.34302,0,-64.1984	0/0:33:33,0:33:1188:0:0:0,-9.93399,-104.287	0/0:22:22,0:22:792:0:0:0,-6.62266,-69.9477	0/0:17:17,0:17:608:0:0:0,-5.11751,-53.9027	0/1:27:21,6:21:756:6:216:-5.94508,0,-56.6826	0/0:73:73,0:73:2616:0:0:0,-21.9752,-227.871	0/0:46:46,0:46:1644:0:0:0,-13.8474,-142.805	0/1:21:15,6:15:540:6:212:-7.7001,0,-41.5641	0/0:49:49,0:49:1756:0:0:0,-14.7505,-153.583	0/0:18:18,0:18:648:0:0:0,-5.41854,-57.3576	0/0:9:9,0:9:324:0:0:0,-2.70927,-28.8723	0/0:19:19,0:19:684:0:0:0,-5.71957,-57.5076	0/0:15:15,0:15:540:0:0:0,-4.51545,-47.3143	0/1:17:10,7:10:360:7:243:-11.0108,0,-26.9653	0/1:14:3,11:3:104:11:387:-21.1798,0,-5.31383	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.0412	0/1:22:15,7:15:540:7:243:-9.55912,0,-41.1424	0/0:55:55,0:55:1968:0:0:0,-16.5566,-172.582	0/0:53:53,0:53:1908:0:0:0,-15.9546,-167.142	0/1:29:18,11:18:648:11:396:-16.8572,0,-48.6626	0/0:33:33,0:33:1184:0:0:0,-9.93399,-104.152	0/1:30:21,9:21:752:9:315:-11.3271,0,-57.5478	0/0:27:27,0:27:968:0:0:0,-8.12781,-83.5309	0/1:69:47,22:47:1661:22:779:-29.7373,0,-122.404	0/0:76:76,0:76:2728:0:0:0,-22.8783,-237.44	0/1:4:2,2:2:59:2:72:-3.65742,0,-4.35915	0/0:76:76,0:76:2728:0:0:0,-22.8783,-239.534	0/0:27:26,1:26:927:1:36:0,-5.5691,-78.0754	0/0:51:51,0:51:1832:0:0:0,-15.3525,-161.796	0/0:207:206,1:206:7365:1:36:0,-59.7545,-643.837	0/0:67:64,3:64:2296:3:104:0,-13.0567,-193.501	0/0:156:156,0:156:5584:0:0:0,-46.9607,-488.614	0/0:181:181,0:181:6500:0:0:0,-54.4864,-569.64	0/0:84:84,0:84:3020:0:0:0,-25.2865,-264.011	0/0:54:54,0:54:1932:0:0:0,-16.2556,-169.728	0/1:50:32,18:32:1152:18:648:-27.3414,0,-85.638	0/0:31:29,2:29:1040:2:72:0,-4.47039,-87.0689	0/0:68:68,0:68:2427:0:0:0,-20.47,-210.879	0/1:12:10,2:10:356:2:72:-1.24918,0,-28.046	0/0:29:29,0:29:1035:0:0:0,-8.72987,-90.7396	0/1:33:20,13:20:720:13:464:-20.04,0,-53.8662	0/1:9:5,4:5:180:4:144:-6.75794,0,-13.1218	0/0:10:10,0:10:356:0:0:0,-3.0103,-31.4688	0/0:16:16,0:16:572:0:0:0,-4.81648,-50.3132	0/0:33:33,0:33:1180:0:0:0,-9.93399,-103.931	0/0:42:42,0:42:1496:0:0:0,-12.6433,-128.69	0/0:39:39,0:39:1396:0:0:0,-11.7402,-122.955	0/0:42:42,0:42:1508:0:0:0,-12.6433,-131.078	0/0:47:47,0:47:1680:0:0:0,-14.1484,-145.97	0/0:146:146,0:146:5217:0:0:0,-43.9504,-457.082	0/1:44:37,7:37:1332:7:248:-3.07938,0,-103.998	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.5443	0/0:106:106,0:106:3799:0:0:0,-31.9092,-331.938	0/1:16:13,3:13:468:3:108:-2.3479,0,-36.7314	0/0:12:12,0:12:432:0:0:0,-3.61236,-38.3186	0/0:101:101,0:101:3612:0:0:0,-30.404,-314.662	0/0:220:215,5:215:7707:5:180:0,-54.4565,-658.754	0/0:21:21,0:21:756:0:0:0,-6.32163,-66.3004	0/1:28:13,15:13:468:15:531:-26.1772,0,-33.1191	0/0:110:110,0:110:3929:0:0:0,-33.1133,-345.714	0/0:61:61,0:61:2192:0:0:0,-18.3628,-190.941	0/1:35:23,12:23:828:12:432:-17.3539,0,-62.6505	0/0:28:28,0:28:1004:0:0:0,-8.42884,-88.7014	0/0:33:33,0:33:1180:0:0:0,-9.93399,-102.903	0/0:62:61,1:61:2188:1:36:0,-16.1052,-189.701	0/1:38:16,22:16:572:22:788:-39.9396,0,-38.8253	0/0:22:22,0:22:792:0:0:0,-6.62266,-68.0497	0/0:23:23,0:23:824:0:0:0,-6.92369,-73.0564	0/0:35:35,0:35:1260:0:0:0,-10.536,-111.305	0/0:147:147,0:147:5265:0:0:0,-44.2514,-461.115	0/1:38:31,7:31:1116:7:248:-4.88556,0,-86.4215	0/1:14:9,5:9:324:5:180:-7.55563,0,-24.6578	0/0:49:49,0:49:1756:0:0:0,-14.7505,-152.875	0/0:45:45,0:45:1612:0:0:0,-13.5463,-142.396	0/1:27:17,10:17:612:10:356:-15.1056,0,-46.0355	0/0:16:16,0:16:576:0:0:0,-4.81648,-51.0546	0/0:147:147,0:147:5260:0:0:0,-44.2514,-458.438	0/1:19:11,8:11:396:8:284:-12.9081,0,-29.4905	0/0:15:15,0:15:540:0:0:0,-4.51545,-47.1138	0/0:107:107,0:107:3836:0:0:0,-32.2102,-336.169	0/1:30:18,12:18:644:12:424:-18.5894,0,-47.1694	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.2803	0/0:11:10,1:10:360:1:36:0,-0.752623,-29.5242	0/0:35:35,0:35:1256:0:0:0,-10.536,-110.986	0/1:12:10,2:10:356:2:72:-1.24918,0,-27.3644	0/0:15:15,0:15:540:0:0:0,-4.51545,-47.2232	0/0:20:20,0:20:720:0:0:0,-6.0206,-63.7303	0/0:28:27,1:27:972:1:36:0,-5.87013,-82.8657	0/1:14:12,2:12:432:2:72:-0.647123,0,-33.9645	0/1:14:3,11:3:108:11:387:-21.1798,0,-5.6444	0/0:20:20,0:20:712:0:0:0,-6.0206,-62.7802	0/0:12:12,0:12:413:0:0:0,-3.61236,-36.7641
chr03	26204445	.	TC	TG	158626	PASS	AB=0.440287;ABP=128.007;AC=148;AF=0.787234;AN=188;AO=7780;CIGAR=1M1X;DP=10064;DPB=10064.5;DPRA=0;EPP=16897.1;EPPR=4932.25;GTI=0;LEN=1;MEANALT=1.10638;MQM=59.608;MQMR=59.8815;NS=94;NUMALT=1;ODDS=1.11179;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18;PQR=0;PRO=0;QA=268799;QR=79850;RO=2270;RPL=1;RPP=16888.4;RPPR=4932.25;RPR=7779;RUN=1;SAF=1;SAP=16888.4;SAR=7779;SRF=0;SRP=4932.25;SRR=2270;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:44,37:44:1550:37:1285:-91.5569,0,-115.408	1/1:52:0,52:0:0:52:1794:-161.707,-15.6536,0	0/1:164:98,66:98:3475:66:2286:-156.599,0,-263.596	1/1:195:0,194:0:0:194:6677:-600.606,-58.3998,0	1/1:64:4,60:4:142:60:2047:-171.361,-6.13671,0	1/1:54:1,53:1:36:53:1870:-164.971,-12.6573,0	0/1:112:57,55:57:1983:55:1914:-138.811,0,-145.025	1/1:149:1,148:1:36:148:5157:-460.574,-41.2552,0	1/1:62:0,62:0:0:62:2118:-190.844,-18.6639,0	0/1:107:57,50:57:2029:50:1713:-122.181,0,-150.661	1/1:64:0,64:0:0:64:2211:-199.211,-19.2659,0	1/1:85:0,85:0:0:85:2909:-261.761,-25.5876,0	1/1:99:0,99:0:0:99:3403:-306.472,-29.802,0	1/1:74:0,74:0:0:74:2504:-225.605,-22.2762,0	1/1:81:0,81:0:0:81:2836:-255.442,-24.3834,0	0/1:61:33,28:33:1164:28:946:-67.0764,0,-86.7033	0/1:34:16,18:16:549:18:614:-45.3434,0,-39.497	1/1:62:0,62:0:0:62:2087:-188.072,-18.6639,0	0/1:51:22,29:22:790:29:965:-71.7898,0,-56.0728	1/1:141:0,141:0:0:141:4848:-436.205,-42.4452,0	1/1:206:1,203:1:25:203:7040:-631.093,-59.1786,0	0/1:161:127,34:127:4450:34:1191:-59.0176,0,-352.209	1/1:118:1,117:1:36:117:4041:-360.205,-31.9233,0	0/1:67:35,32:35:1250:32:1083:-77.5956,0,-92.6365	1/1:31:0,31:0:0:31:1084:-97.8561,-9.33193,0	0/1:367:195,171:195:6808:171:5939:-424.046,0,-501.83	1/1:202:0,202:0:0:202:7068:-636.037,-60.8081,0	0/1:45:22,23:22:786:23:789:-57.7713,0,-57.5183	1/1:189:0,189:0:0:189:6541:-588.745,-56.8947,0	1/1:100:2,98:2:72:98:3355:-295.181,-23.2663,0	1/1:142:0,142:0:0:142:4893:-440.455,-42.7463,0	0/1:14:7,7:7:252:7:243:-17.9931,0,-18.8063	0/1:9:4,5:4:144:5:180:-13.8365,0,-10.6043	0/1:13:2,11:2:72:11:342:-27.1662,0,-2.92333	1/1:9:0,9:0:0:9:316:-28.7706,-2.70927,0	1/1:23:0,23:0:0:23:820:-74.0947,-6.92369,0	1/1:214:0,214:0:0:214:7368:-663.123,-64.4204,0	0/1:185:109,76:109:3821:76:2632:-181.422,0,-288.387	0/1:58:33,25:33:1141:25:875:-61.59,0,-85.5335	0/1:12:10,2:10:360:2:72:-3.22436,0,-29.1315	0/1:197:95,102:95:3327:102:3555:-260.704,0,-240.347	1/1:100:0,100:0:0:100:3423:-308.276,-30.103,0	0/1:193:113,79:113:3981:79:2700:-185.164,0,-300.324	0/1:109:53,56:53:1877:56:1907:-139.078,0,-136.34	1/1:75:1,74:1:34:74:2558:-227.052,-19.1783,0	1/1:193:0,193:0:0:193:6602:-594.232,-58.0988,0	1/1:84:0,84:0:0:84:2940:-264.629,-25.2865,0	1/1:194:1,193:1:23:193:6720:-602.571,-56.0999,0	1/1:130:0,130:0:0:130:4473:-402.729,-39.1339,0	1/1:121:0,121:0:0:121:4236:-381.407,-36.4246,0	1/1:148:1,147:1:25:147:5126:-458.895,-42.0526,0	1/1:20:0,20:0:0:20:694:-62.7742,-6.0206,0	0/1:139:84,55:84:2969:55:1913:-130.575,0,-225.602	1/1:69:0,69:0:0:69:2407:-216.861,-20.7711,0	0/1:12:8,4:8:284:4:144:-9.70126,0,-22.2912	0/1:135:70,64:70:2475:64:2211:-158.632,0,-182.393	1/1:48:1,47:1:25:47:1630:-144.486,-11.9496,0	0/1:10:4,6:4:139:6:212:-16.4145,0,-9.84191	0/1:18:3,15:3:108:15:519:-41.5985,0,-4.65663	1/1:78:1,77:1:36:77:2657:-235.776,-19.8821,0	0/1:129:61,68:61:2134:68:2352:-173.094,0,-153.487	0/1:10:1,9:1:36:9:315:-25.6707,0,-0.587975	1/1:161:0,161:0:0:161:5631:-506.7,-48.4658,0	0/1:212:103,109:103:3589:109:3771:-275.656,0,-259.238	1/1:82:0,82:0:0:82:2817:-253.761,-24.6845,0	1/1:70:0,69:0:0:69:2417:-217.413,-20.7711,0	1/1:357:3,354:3:108:354:12220:-1089.52,-97.3925,0	0/1:183:127,54:127:4511:54:1880:-114.654,0,-351.353	1/1:42:0,42:0:0:42:1436:-129.52,-12.6433,0	1/1:64:0,64:0:0:64:2221:-200.152,-19.2659,0	1/1:202:0,202:0:0:202:6988:-628.742,-60.8081,0	1/1:25:0,25:0:0:25:888:-80.239,-7.52575,0	0/1:193:126,67:126:4467:67:2318:-150.566,0,-344.104	0/1:127:60,67:60:2112:67:2346:-172.952,0,-152.117	1/1:176:0,176:0:0:176:6086:-547.782,-52.9813,0	1/1:146:0,146:0:0:146:5079:-456.374,-43.9504,0	0/1:100:56,44:56:1988:44:1506:-105.686,0,-148.863	1/1:98:0,98:0:0:98:3422:-308.181,-29.5009,0	0/1:17:4,13:4:142:13:439:-34.7159,0,-8.0117	0/1:144:79,65:79:2798:65:2202:-155.078,0,-208.712	1/1:108:0,108:0:0:108:3721:-335.064,-32.5112,0	1/1:175:0,175:0:0:175:6139:-552.546,-52.6803,0	0/1:39:25,14:25:889:14:476:-31.4155,0,-68.5826	1/1:82:1,81:1:36:81:2793:-247.975,-21.0862,0	0/1:55:32,23:32:1099:23:767:-52.7818,0,-82.6564	1/1:157:1,156:1:34:156:5352:-478.364,-43.8628,0	0/1:41:23,18:23:789:18:618:-43.5893,0,-58.9806	1/1:60:0,60:0:0:60:2042:-184.023,-18.0618,0	1/1:84:0,84:0:0:84:2854:-257.071,-25.2865,0	0/1:52:24,25:24:846:25:830:-59.8935,0,-61.3541	0/1:88:41,47:41:1427:47:1598:-117.538,0,-102.233	0/1:292:186,104:186:6537:104:3519:-229.251,0,-500.755	1/1:145:1,144:1:34:144:4953:-442.508,-40.2504,0	1/1:118:0,118:0:0:118:4120:-370.981,-35.5215,0
chr03	26204540	.	C	T	31871	PASS	AB=0.389195;ABP=409.642;AC=31;AF=0.164894;AN=188;AO=1509;CIGAR=1X;DP=11789;DPB=11789;DPRA=1.12317;EPP=2787.33;EPPR=18877.6;GTI=0;LEN=1;MEANALT=1.06977;MQM=56.7097;MQMR=57.4328;NS=94;NUMALT=1;ODDS=26.8278;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53817;QR=362011;RO=10274;RPL=683;RPP=32.4367;RPPR=5181.76;RPR=826;RUN=1;SAF=742;SAP=3.90968;SAR=767;SRF=3074;SRP=3601.11;SRR=7200;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:22,28:22:780:28:1008:-75.8949,0,-55.4306	0/0:68:68,0:68:2409:0:0:0,-20.47,-216.974	0/1:67:33,34:33:1167:34:1209:-88.5154,0,-85.0921	0/0:108:108,0:108:3827:0:0:0,-32.5112,-344.519	0/0:27:26,1:26:908:1:36:0,-4.52953,-78.4302	0/0:55:55,0:55:1946:0:0:0,-16.5566,-175.38	0/1:88:38,50:38:1348:50:1796:-135.306,0,-95.0813	0/0:107:107,0:107:3805:0:0:0,-32.2102,-342.439	0/0:96:96,0:96:3380:0:0:0,-28.8989,-304.209	0/1:68:30,38:30:1059:38:1364:-102.553,0,-75.1483	0/0:505:505,0:505:17649:0:0:0,-152.02,-1587.04	0/0:175:175,0:175:6111:0:0:0,-52.6802,-548.745	0/0:189:189,0:189:6698:0:0:0,-56.8947,-602.163	0/0:161:159,2:159:5469:2:57:0,-43.0525,-486.633	0/0:127:126,0:126:4418:0:0:0,-37.9298,-396.831	0/1:125:56,69:56:1983:69:2472:-184.877,0,-140.967	0/1:120:59,61:59:2102:61:2160:-158.255,0,-152.808	0/0:105:105,0:105:3725:0:0:0,-31.6081,-335.253	0/1:197:148,48:148:5159:48:1705:-94.1737,0,-404.003	0/0:66:66,0:66:2346:0:0:0,-19.868,-211.341	0/0:91:91,0:91:3239:0:0:0,-27.3937,-291.5	0/1:24:9,15:9:320:15:527:-40.5327,0,-21.9176	0/0:51:51,0:51:1816:0:0:0,-15.3525,-163.502	0/1:77:56,21:56:1987:21:748:-44.4487,0,-155.845	0/0:46:46,0:46:1622:0:0:0,-13.8474,-146.218	0/1:132:65,67:65:2290:67:2386:-175.13,0,-166.623	0/0:118:118,0:118:4163:0:0:0,-35.5215,-374.474	0/1:61:23,38:23:808:38:1359:-103.889,0,-54.6671	0/0:82:82,0:82:2900:0:0:0,-24.6845,-261.179	0/0:50:50,0:50:1764:0:0:0,-15.0515,-158.953	0/0:63:63,0:63:2232:0:0:0,-18.9649,-200.718	0/0:75:75,0:75:2650:0:0:0,-22.5772,-238.332	0/0:118:111,7:111:3932:7:248:0,-13.0126,-330.123	0/0:69:69,0:69:2425:0:0:0,-20.7711,-217.525	0/0:444:444,0:444:15708:0:0:0,-133.657,-1408.04	0/0:388:388,0:388:13757:0:0:0,-116.8,-1233.38	0/0:268:268,0:268:9471:0:0:0,-80.676,-852.275	0/1:41:24,17:24:860:17:612:-43.0076,0,-65.3703	0/1:232:176,56:176:6165:56:2007:-110.481,0,-483.933	0/0:65:64,1:64:2255:1:32:0,-16.3697,-199.782	0/1:91:46,45:46:1624:45:1594:-116.153,0,-118.857	0/0:209:209,0:209:7341:0:0:0,-62.9153,-660.127	0/1:97:53,44:53:1875:44:1563:-111.611,0,-139.795	0/1:144:65,79:65:2278:79:2828:-211.258,0,-161.874	0/0:120:120,0:120:4215:0:0:0,-36.1236,-379.359	0/0:54:54,0:54:1890:0:0:0,-16.2556,-170.358	0/0:63:63,0:63:2239:0:0:0,-18.9649,-201.676	0/0:68:68,0:68:2394:0:0:0,-20.47,-215.552	0/0:25:25,0:25:870:0:0:0,-7.52575,-78.5555	0/0:75:75,0:75:2632:0:0:0,-22.5772,-237.026	0/0:52:52,0:52:1848:0:0:0,-15.6536,-166.597	0/0:241:240,1:240:8487:1:36:0,-68.9997,-759.454	0/1:59:38,20:38:1360:20:718:-46.7369,0,-104.829	0/0:34:34,0:34:1192:0:0:0,-10.235,-107.582	0/0:83:81,2:81:2863:2:72:0,-18.1574,-250.543	0/1:60:24,36:24:847:36:1284:-97.6701,0,-57.8263	0/0:46:46,0:46:1615:0:0:0,-13.8474,-145.495	0/0:72:71,1:71:2500:1:36:0,-18.0759,-221.396	0/0:57:55,2:55:1952:2:72:0,-10.3255,-169.033	0/0:71:70,0:70:2455:0:0:0,-21.0721,-220.734	0/1:173:95,78:95:3332:78:2761:-196.365,0,-247.854	0/0:86:84,2:84:2964:2:72:0,-19.0543,-259.95	0/0:55:55,0:55:1961:0:0:0,-16.5566,-176.707	0/1:93:50,43:50:1753:43:1531:-110.053,0,-129.914	0/0:46:46,0:46:1627:0:0:0,-13.8474,-146.622	0/0:52:52,0:52:1838:0:0:0,-15.6536,-165.633	0/0:101:101,0:101:3580:0:0:0,-30.404,-322.249	0/1:71:23,48:23:819:48:1716:-132.99,0,-52.6058	0/0:755:754,1:754:26354:1:36:0,-223.684,-2361.86	0/0:68:68,0:68:2417:0:0:0,-20.47,-217.544	0/0:117:117,0:117:4068:0:0:0,-35.2205,-365.963	0/0:244:244,0:244:8670:0:0:0,-73.4513,-779.553	0/1:44:19,25:19:659:25:888:-66.634,0,-46.3541	0/1:61:24,37:24:840:37:1319:-100.109,0,-57.3758	0/0:105:105,0:105:3690:0:0:0,-31.6081,-331.599	0/0:83:83,0:83:2953:0:0:0,-24.9855,-265.991	0/1:88:46,42:46:1619:42:1491:-107.831,0,-119.463	0/0:92:91,1:91:3227:1:36:0,-24.0965,-286.852	0/0:164:160,4:160:5639:4:144:0,-36.072,-493.18	0/1:67:36,31:36:1270:31:1108:-79.7686,0,-94.4119	0/0:80:80,0:80:2844:0:0:0,-24.0824,-256.123	0/0:95:94,0:94:3300:0:0:0,-28.2968,-296.71	0/1:134:58,76:58:2044:76:2717:-204.348,0,-143.821	0/0:147:147,0:147:5229:0:0:0,-44.2514,-469.381	0/1:142:65,77:65:2320:77:2764:-206.18,0,-166.221	0/0:235:235,0:235:8256:0:0:0,-70.742,-742.696	0/1:61:26,35:26:928:35:1260:-95.2679,0,-65.4453	0/0:110:110,0:110:3862:0:0:0,-33.1133,-347.554	0/0:131:131,0:131:4632:0:0:0,-39.4349,-416.709	0/1:468:411,56:411:14402:56:1992:-38.0387,0,-1152.63	0/1:547:475,72:475:16720:72:2567:-66.1045,0,-1337.15	0/1:131:33,98:33:1184:98:3486:-274.352,0,-67.3815	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:215:215,0:215:7592:0:0:0,-64.7214,-683.152
chr03	26371646	.	C	T	25700.3	PASS	AB=0.511644;ABP=6.39846;AC=41;AF=0.218085;AN=188;AO=1482;CIGAR=1X;DP=6875;DPB=6875;DPRA=1.02318;EPP=3092.16;EPPR=11353.8;GTI=2;LEN=1;MEANALT=1.02083;MQM=59.9804;MQMR=59.9922;NS=94;NUMALT=1;ODDS=1.83165;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53044;QR=191838;RO=5390;RPL=1467;RPP=3092.16;RPPR=11353.8;RPR=15;RUN=1;SAF=0;SAP=3221.13;SAR=1482;SRF=0;SRP=11707.2;SRR=5390;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:8,16:8:288:16:576:-44.9503,0,-19.0427	0/0:121:120,1:120:4275:1:36:0,-32.8264,-381.331	0/1:84:44,40:44:1571:40:1434:-104.071,0,-116.394	0/0:227:227,0:227:8090:0:0:0,-68.3338,-728.121	0/0:62:62,0:62:2184:0:0:0,-18.6639,-196.824	0/0:17:16,0:16:576:0:0:0,-4.81648,-51.8152	0/1:95:41,54:41:1456:54:1936:-145.919,0,-102.736	0/0:148:148,0:148:5279:0:0:0,-44.5524,-475.247	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/1:95:48,47:48:1692:47:1684:-123.249,0,-123.968	0/0:45:45,0:45:1611:0:0:0,-13.5463,-145.279	0/0:40:39,1:39:1396:1:36:0,-8.44292,-122.341	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/0:70:70,0:70:2479:0:0:0,-21.0721,-223.364	0/0:38:38,0:38:1343:0:0:0,-11.4391,-121.169	0/1:42:25,17:25:896:17:606:-42.2282,0,-68.3171	0/1:77:39,38:39:1392:38:1364:-99.8814,0,-102.4	0/0:53:53,0:53:1875:0:0:0,-15.9546,-169.028	0/1:29:11,18:11:396:18:644:-49.5607,0,-27.2529	0/0:120:118,2:118:4185:2:68:0,-29.6659,-370.376	0/0:128:128,0:128:4527:0:0:0,-38.5318,-407.6	0/1:92:21,71:21:735:71:2536:-200.797,0,-38.7766	0/0:30:30,0:30:1064:0:0:0,-9.0309,-96.0717	0/1:58:34,24:34:1204:24:860:-60.2621,0,-91.2061	0/0:55:55,0:55:1963:0:0:0,-16.5566,-176.945	0/1:219:93,126:93:3310:126:4517:-340.77,0,-232.193	0/0:109:109,0:109:3864:0:0:0,-32.8123,-347.959	0/1:17:8,9:8:288:9:324:-24.3883,0,-21.1499	0/0:164:164,0:164:5833:0:0:0,-49.3689,-525.029	0/0:181:181,0:181:6445:0:0:0,-54.4864,-580.139	0/0:67:63,3:63:2256:3:108:0,-10.1526,-193.228	0/0:8:8,0:8:275:0:0:0,-2.40824,-25.0835	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:9:8,1:8:280:1:36:-0.889005,0,-22.83	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:104:104,0:104:3710:0:0:0,-31.3071,-334.102	0/1:180:90,90:90:3190:90:3228:-236.556,0,-233.139	0/1:33:20,13:20:716:13:468:-32.5257,0,-54.8337	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:145:88,57:88:3142:57:2044:-140.582,0,-239.355	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:109:69,40:69:2472:40:1440:-97.0855,0,-189.921	0/1:42:25,17:25:892:17:612:-42.7702,0,-67.9564	0/0:60:60,0:60:2148:0:0:0,-18.0618,-193.587	0/1:48:43,5:43:1544:5:180:-2.10263,0,-124.804	0/0:90:90,0:90:3193:0:0:0,-27.0927,-287.594	0/0:164:163,0:163:5798:0:0:0,-49.0679,-521.578	0/0:79:79,0:79:2796:0:0:0,-23.7814,-251.88	0/0:144:144,0:144:5096:0:0:0,-43.3483,-458.785	0/0:145:145,0:145:5151:0:0:0,-43.6493,-463.735	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:95:46,49:46:1640:49:1740:-128.287,0,-119.291	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:22:13,9:13:468:9:324:-22.8832,0,-35.837	0/1:114:35,79:35:1244:79:2833:-220.889,0,-77.9472	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3611	0/1:10:5,5:5:176:5:180:-13.5418,0,-13.1747	0/1:27:11,16:11:383:16:576:-44.0472,0,-26.6754	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.422	0/1:81:41,40:41:1467:40:1436:-105.154,0,-107.942	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.303	0/1:179:81,98:81:2884:98:3500:-261.319,0,-205.913	0/0:60:60,0:60:2126:0:0:0,-18.0618,-191.607	0/0:119:119,0:119:4229:0:0:0,-35.8226,-380.791	0/0:165:164,1:164:5858:1:36:0,-46.0717,-523.733	0/1:141:53,88:53:1884:88:3137:-240.11,0,-127.393	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/0:47:47,0:47:1667:0:0:0,-14.1484,-150.317	0/0:71:70,1:70:2512:1:36:0,-17.7749,-222.734	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/1:94:48,46:48:1720:46:1648:-120.312,0,-126.789	0/1:36:22,14:22:775:14:496:-34.1372,0,-59.2341	0/0:114:114,0:114:4056:0:0:0,-34.3174,-365.227	0/1:112:49,63:49:1739:63:2246:-168.688,0,-123.078	0/1:135:73,62:73:2591:62:2219:-159.335,0,-192.713	0/0:111:111,0:111:3951:0:0:0,-33.4143,-355.783	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:85:49,36:49:1737:36:1268:-88.8331,0,-131.025	0/0:93:93,0:93:3319:0:0:0,-27.9958,-298.928	0/0:133:133,0:133:4744:0:0:0,-40.037,-427.12	0/1:80:40,40:40:1432:40:1424:-104.375,0,-105.095	0/0:39:39,0:39:1382:0:0:0,-11.7402,-124.677	0/1:66:33,33:33:1180:33:1188:-87.3606,0,-86.6401	0/0:89:88,1:88:3122:1:36:0,-23.1934,-277.609	0/1:31:10,21:10:360:21:752:-58.6743,0,-23.4124	0/0:53:53,0:53:1887:0:0:0,-15.9546,-170.108	0/0:45:45,0:45:1583:0:0:0,-13.5463,-142.76	0/1:39:22,17:22:784:17:608:-43.3119,0,-59.1437	0/1:65:32,33:32:1140:33:1184:-87.3014,0,-83.3423	0/1:40:13,27:13:455:27:972:-75.7567,0,-29.2408	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73
chr03	26475117	.	GC	AT,AC	122933	PASS	AB=0.574735,0.423819;ABP=103.627,107.559;AC=157,31;AF=0.835106,0.164894;AN=188;AO=7138,905;CIGAR=2X,1X1M;DP=8052;DPB=8052;DPRA=0,1.28141;EPP=8999.15,1823.31;EPPR=5.18177;GTI=3;LEN=2,1;MEANALT=1.56383,2.13333;MQM=23.8455,59.8431;MQMR=60;NS=94;NUMALT=2;ODDS=11.7439;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=254046,32309;QR=31;RO=1;RPL=6288,17;RPP=8999.15,1823.31;RPPR=5.18177;RPR=850,888;RUN=1,1;SAF=7138,905;SAP=15503,1968.19;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:5:0,4,1:0:0:4,1:144,32:-10.6597,-2.89828,-1.69416,-8.06748,0,-7.76645	1/1:77:0,77,0:0:0:77,0:2733,0:-165.911,-23.1793,0,-165.911,-23.1793,-165.911	1/2:41:0,18,23:0:0:18,23:644,824:-100.793,-67.5596,-62.1411,-33.5246,0,-26.6009	1/1:118:0,117,0:0:0:117,0:4159,0:-241.538,-35.2205,0,-241.538,-35.2205,-241.538	1/1:22:0,21,1:0:0:21,1:754,36:-43.7836,-6.32163,0,-40.8404,-3.02439,-40.5394	1/1:31:0,31,0:0:0:31,0:1116,0:-68.0431,-9.33193,0,-68.0431,-9.33193,-68.0431	1/2:65:0,38,27:0:0:38,27:1366,964:-147.611,-78.949,-67.5099,-68.9678,0,-60.84	1/1:65:0,65,0:0:0:65,0:2321,0:-141.425,-19.567,0,-141.425,-19.567,-141.425	1/1:46:0,46,0:0:0:46,0:1639,0:-98.6336,-13.8474,0,-98.6336,-13.8474,-98.6336	1/2:35:0,12,22:0:0:12,22:408,792:-85.3142,-64.6613,-61.049,-20.6109,0,-13.9883	1/1:200:0,200,0:0:0:200,0:7131,0:-412.856,-60.206,0,-412.856,-60.206,-412.856	1/1:41:0,41,0:0:0:41,0:1458,0:-87.7515,-12.3422,0,-87.7515,-12.3422,-87.7515	1/1:52:0,52,0:0:0:52,0:1870,0:-112.344,-15.6536,0,-112.344,-15.6536,-112.344	1/1:43:0,43,0:0:0:43,0:1537,0:-89.6803,-12.9443,0,-89.6803,-12.9443,-89.6803	1/1:44:0,44,0:0:0:44,0:1580,0:-91.5214,-13.2453,0,-91.5214,-13.2453,-91.5214	1/2:30:0,12,18:0:0:12,18:421,648:-74.0079,-53.2333,-49.621,-21.0543,0,-15.6357	1/2:43:0,19,23:0:0:19,23:673,815:-102.22,-66.5049,-60.7853,-35.7677,0,-28.844	1/1:41:0,41,0:0:0:41,0:1453,0:-88.8223,-12.3422,0,-88.8223,-12.3422,-88.8223	1/2:58:0,49,8:0:0:49,8:1736,284:-113.274,-23.2447,-8.49424,-90.1178,0,-87.7095	1/1:77:0,77,0:0:0:77,0:2751,0:-159.135,-23.1793,0,-159.135,-23.1793,-159.135	1/1:95:0,95,0:0:0:95,0:3377,0:-197.489,-28.5979,0,-197.489,-28.5979,-197.489	1/2:42:0,22,20:0:0:22,20:776,705:-99.5313,-57.7522,-51.1295,-42.0802,0,-36.0596	1/1:26:0,26,0:0:0:26,0:936,0:-54.5132,-7.82678,0,-54.5132,-7.82678,-54.5132	1/2:34:0,24,10:0:0:24,10:841,360:-71.5382,-29.7294,-22.5046,-42.1297,0,-39.1194	1/1:31:0,31,0:0:0:31,0:1092,0:-64.1587,-9.33193,0,-64.1587,-9.33193,-64.1587	1/2:173:0,85,88:0:0:85,88:3023,3104:-415.762,-253.051,-227.463,-163.009,0,-136.519	1/1:119:0,118,1:0:0:118,1:4223,35:-244.609,-35.5215,0,-242.03,-32.6235,-241.729	1/2:16:0,6,10:0:0:6,10:216,360:-40.1842,-29.734,-27.9278,-10.7276,0,-7.71728	1/1:124:0,123,1:0:0:123,1:4348,36:-272.033,-37.0267,0,-269.095,-33.7294,-268.794	1/1:56:0,56,0:0:0:56,0:2005,0:-116.662,-16.8577,0,-116.662,-16.8577,-116.662	1/1:74:0,74,0:0:0:74,0:2610,0:-153.493,-22.2762,0,-153.493,-22.2762,-153.493	1/1:353:0,352,1:0:0:352,1:12555,36:-730.862,-105.963,0,-727.924,-102.665,-727.623	1/1:221:0,219,1:0:0:219,1:7786,36:-454.93,-65.9256,0,-451.992,-62.9222,-451.691	1/1:90:0,88,2:0:0:88,2:3138,72:-187.839,-26.4906,0,-181.961,-20.256,-181.359	1/1:476:0,473,2:0:0:473,2:16785,72:-1010.89,-142.387,0,-1005.55,-136.968,-1004.95	1/1:467:0,467,0:0:0:467,0:16635,0:-1002.95,-140.581,0,-1002.95,-140.581,-1002.95	1/1:125:0,125,0:0:0:125,0:4462,0:-276.931,-37.6288,0,-276.931,-37.6288,-276.931	1/2:95:0,57,38:0:0:57,38:2037,1352:-210.282,-110.541,-93.3825,-100.045,0,-88.6059	1/2:137:0,112,25:0:0:112,25:3982,888:-278.268,-72.7115,-38.9962,-205.89,0,-198.364	1/1:88:0,87,1:0:0:87,1:3081,36:-180.288,-26.1896,0,-177.349,-22.8924,-177.048	1/2:64:0,32,32:0:0:32,32:1144,1148:-151.233,-93.9969,-84.3639,-57.5313,0,-47.8983	1/1:147:0,147,0:0:0:147,0:5273,0:-302.832,-44.2514,0,-302.832,-44.2514,-302.832	1/2:68:0,38,30:0:0:38,30:1351,1071:-154.488,-87.6707,-76.2316,-67.1176,0,-58.0867	1/2:35:0,16,19:0:0:16,19:574,684:-84.0989,-56.1708,-51.3543,-28.2163,0,-22.4967	1/1:28:0,28,0:0:0:28,0:1006,0:-58.3782,-8.42884,0,-58.3782,-8.42884,-58.3782	1/1:41:0,41,0:0:0:41,0:1470,0:-91.2261,-12.3422,0,-91.2261,-12.3422,-91.2261	1/1:39:0,39,0:0:0:39,0:1387,0:-83.2634,-11.7402,0,-83.2634,-11.7402,-83.2634	1/1:112:0,112,0:0:0:112,0:3973,0:-229.339,-33.7154,0,-229.339,-33.7154,-229.339	1/1:47:0,45,1:0:0:45,1:1595,31:-93.1274,-13.5464,0,-90.6373,-11.0652,-90.3362	1/1:64:0,64,0:0:0:64,0:2261,0:-132.875,-19.2659,0,-132.875,-19.2659,-132.875	1/1:32:0,32,0:0:0:32,0:1150,0:-71.304,-9.63296,0,-71.304,-9.63296,-71.304	1/1:229:0,227,2:0:0:227,2:8083,72:-467.934,-68.3338,0,-462.087,-62.129,-461.485	1/2:83:0,39,44:0:0:39,44:1365,1580:-201.453,-129.238,-117.498,-72.5102,0,-59.2649	1/1:12:0,12,0:0:0:12,0:432,0:-26.7185,-3.61236,0,-26.7185,-3.61236,-26.7185	1/1:191:0,188,3:0:0:188,3:6719,108:-406.551,-56.5936,0,-397.737,-47.4216,-396.834	1/2:47:0,20,27:0:0:20,27:707,968:-114.769,-79.3096,-73.289,-35.7443,0,-27.6165	1/1:25:0,25,0:0:0:25,0:900,0:-52.1519,-7.52575,0,-52.1519,-7.52575,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chr03	26475135	.	AAT	AACTAC	75150.9	PASS	AB=0.559339;ABP=65.8901;AC=157;AF=0.835106;AN=188;AO=6904;CIGAR=1M3I1M1X;DP=7865;DPB=14786;DPRA=0;EPP=14977.5;EPPR=2020.31;GTI=3;LEN=6;MEANALT=1.30851;MQM=23.5963;MQMR=59.9419;NS=94;NUMALT=1;ODDS=9.1478;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243647;QR=32708;RO=929;RPL=6902;RPP=14977.5;RPPR=2020.31;RPR=2;RUN=1;SAF=6904;SAP=14994.9;SAR=0;SRF=929;SRP=2020.31;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:4:1,3:1:36:3:107:-5.43561,0,-2.39415	1/1:73:0,73:0:0:73:2565:-155.548,-21.9752,0	0/1:40:23,17:23:812:17:610:-24.4992,0,-61.3596	1/1:113:0,113:0:0:113:3979:-231.373,-34.0164,0	1/1:20:1,19:1:36:19:677:-35.6454,-2.42233,0	1/1:30:1,29:1:36:29:1036:-58.536,-5.43263,0	0/1:64:29,35:29:998:35:1251:-53.2421,0,-70.8616	1/1:59:0,59:0:0:59:2091:-125.74,-17.7608,0	1/1:45:0,45:0:0:45:1586:-95.9763,-13.5464,0	0/1:35:23,12:23:795:12:426:-14.3557,0,-61.3304	1/1:196:0,196:0:0:196:6945:-402.131,-59.0019,0	1/1:40:0,40:0:0:40:1419:-85.5629,-12.0412,0	1/1:50:0,50:0:0:50:1775:-106.933,-15.0515,0	1/1:41:0,40:0:0:40:1432:-82.3308,-12.0412,0	1/1:43:0,43:0:0:43:1526:-88.7938,-12.9443,0	0/1:31:19,12:19:677:12:422:-15.4401,0,-51.9266	0/1:42:23,19:23:821:19:671:-28.0584,0,-61.5697	1/1:38:0,38:0:0:38:1339:-80.9793,-11.4391,0	0/1:57:8,49:8:286:49:1725:-87.3946,0,-8.92678	1/1:75:0,74:0:0:74:2627:-151.614,-22.2762,0	1/1:90:0,90:0:0:90:3158:-184.053,-27.0927,0	0/1:43:21,22:21:740:22:765:-35.7262,0,-53.9789	1/1:26:0,26:0:0:26:920:-54.2339,-7.82678,0	0/1:34:10,24:10:352:24:827:-39.1261,0,-21.7811	1/1:30:0,30:0:0:30:1059:-61.63,-9.0309,0	0/1:174:91,82:91:3218:82:2884:-128.932,0,-237.248	1/1:116:0,114:0:0:114:4027:-234.029,-34.3174,0	0/1:16:10,6:10:355:6:216:-7.71728,0,-27.4739	1/1:121:1,119:1:34:119:4159:-258.65,-33.0108,0	1/1:55:0,54:0:0:54:1917:-110.886,-16.2556,0	1/1:70:0,70:0:0:70:2470:-143.422,-21.0721,0	1/1:347:1,344:1:34:344:12106:-705.766,-100.761,0	1/1:209:1,206:1:36:206:7210:-418.034,-59.0371,0	1/1:88:2,85:2:72:85:2998:-173.96,-19.6276,0	1/1:462:0,459:0:0:459:16145:-976.978,-138.173,0	1/1:453:0,450:0:0:450:15956:-959.591,-135.464,0	1/1:125:0,125:0:0:125:4402:-276.3,-37.6288,0	0/1:95:39,56:39:1361:56:1976:-85.9073,0,-94.1892	0/1:135:26,108:26:921:108:3822:-189.67,0,-42.6691	1/1:84:1,83:1:36:83:2928:-166.746,-21.6882,0	0/1:64:34,30:34:1191:30:1055:-42.5349,0,-88.2277	1/1:148:0,147:0:0:147:5222:-301.651,-44.2514,0	0/1:68:31,37:31:1085:37:1310:-55.9042,0,-77.4877	0/1:37:21,16:21:745:16:562:-21.8004,0,-56.2358	1/1:27:0,26:0:0:26:914:-53.137,-7.82678,0	1/1:41:0,41:0:0:41:1433:-90.7402,-12.3422,0	1/1:38:0,38:0:0:38:1344:-80.6253,-11.4391,0	1/1:112:0,111:0:0:111:3887:-226.643,-33.4143,0	1/1:45:1,44:1:36:44:1540:-87.3817,-9.94808,0	1/1:60:0,60:0:0:60:2153:-123.747,-18.0618,0	1/1:31:0,31:0:0:31:1104:-68.6187,-9.33193,0	1/1:221:1,219:1:36:219:7746:-444.284,-62.9212,0	0/1:80:44,36:44:1549:36:1250:-52.5731,0,-115.614	1/1:12:0,12:0:0:12:432:-26.7185,-3.61236,0	1/1:180:3,177:3:108:177:6257:-366.958,-44.1102,0	0/1:46:27,19:27:959:19:674:-25.4531,0,-72.7794	1/1:24:0,24:0:0:24:846:-49.3586,-7.22472,0	1/1:90:0,89:0:0:89:3116:-195.689,-26.7917,0	1/1:144:1,141:1:36:141:4969:-308.136,-39.477,0	1/1:40:0,40:0:0:40:1378:-81.7985,-12.0412,0	0/1:58:26,31:26:908:31:1101:-46.3507,0,-64.5166	1/1:65:1,64:1:36:64:2267:-127.644,-15.9687,0	1/1:70:0,70:0:0:70:2455:-154.513,-21.0721,0	0/1:155:71,84:71:2498:84:2957:-125.207,0,-178.413	1/1:25:0,25:0:0:25:889:-51.5071,-7.52575,0	1/1:24:0,24:0:0:24:851:-50.8889,-7.22472,0	1/1:72:0,72:0:0:72:2555:-147.586,-21.6742,0	0/1:61:50,11:50:1790:11:389:-4.38971,0,-143.019	1/1:133:0,133:0:0:133:4664:-272.758,-40.037,0	1/1:22:0,22:0:0:22:783:-47.1621,-6.62266,0	1/1:47:0,46:0:0:46:1623:-101.76,-13.8474,0	1/1:206:0,204:0:0:204:7175:-416.985,-61.4101,0	0/1:47:28,19:28:956:19:679:-26.6464,0,-72.1989	0/1:37:14,23:14:498:23:817:-38.2267,0,-34.0174	1/1:76:0,76:0:0:76:2653:-156.294,-22.8783,0	0/1:96:56,40:56:1944:40:1415:-53.2044,0,-146.336	0/1:33:17,16:17:609:16:571:-24.4509,0,-45.2085	1/1:39:0,39:0:0:39:1378:-83.3429,-11.7402,0	1/1:207:0,206:0:0:206:7265:-438.159,-62.0122,0	0/1:55:25,30:25:887:30:1064:-45.2524,0,-63.5915	1/1:70:0,70:0:0:70:2456:-149.129,-21.0721,0	1/1:66:1,65:1:36:65:2292:-129.822,-16.2697,0	0/1:67:35,32:35:1221:32:1139:-45.7602,0,-90.0189	1/1:37:0,37:0:0:37:1320:-76.2875,-11.1381,0	0/1:63:31,32:31:1079:32:1146:-47.0279,0,-78.4535	1/1:79:0,79:0:0:79:2783:-161.691,-23.7814,0	0/1:44:21,23:21:739:23:798:-35.437,0,-53.5859	1/1:54:0,54:0:0:54:1920:-116.167,-16.2556,0	1/1:41:0,41:0:0:41:1458:-87.9341,-12.3422,0	1/1:108:10,98:10:352:98:3475:-169.292,-0.497827,0	0/1:237:25,212:25:892:212:7495:-364.164,0,-9.25583	0/1:38:24,14:24:862:14:500:-17.482,0,-66.4632	1/1:11:0,11:0:0:11:395:-22.7838,-3.31133,0	1/1:45:0,44:0:0:44:1573:-90.1557,-13.2453,0
chr03	27134691	.	A	G	29892.3	PASS	AB=0.484371;ABP=11.0876;AC=46;AF=0.244681;AN=188;AO=1853;CIGAR=1X;DP=8731;DPB=8731;DPRA=0.823573;EPP=4009.4;EPPR=14810.5;GTI=2;LEN=1;MEANALT=1.03846;MQM=59.966;MQMR=59.9748;NS=94;NUMALT=1;ODDS=6.25023;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65385;QR=246088;RO=6875;RPL=1852;RPP=4018.07;RPPR=14801.9;RPR=1;RUN=1;SAF=1;SAP=4018.07;SAR=1852;SRF=1;SRP=14923.2;SRR=6874;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:60:35,25:35:1233:25:866:-60.1921,0,-93.2103	0/1:81:55,26:55:1980:26:902:-57.1094,0,-154.091	0/1:143:68,75:68:2416:75:2635:-194.295,0,-174.647	0/0:207:207,0:207:7380:0:0:0,-62.3132,-663.473	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:60:60,0:60:2148:0:0:0,-18.0618,-193.587	0/1:134:76,58:76:2728:58:2022:-141.914,0,-205.425	0/0:152:152,0:152:5444:0:0:0,-45.7566,-490.086	0/0:112:112,0:112:3993:0:0:0,-33.7154,-359.514	0/1:108:59,49:59:2124:49:1739:-124.283,0,-158.917	0/1:63:42,20:42:1512:20:695:-43.8491,0,-117.351	0/1:114:57,57:57:2048:57:2006:-146.495,0,-150.274	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.684	0/0:85:85,0:85:3056:0:0:0,-25.5875,-275.268	0/1:51:22,29:22:788:29:988:-73.8731,0,-55.8923	0/1:42:23,19:23:828:19:671:-48.0725,0,-62.2009	0/0:27:26,1:26:936:1:36:0,-4.52953,-80.9608	0/1:32:14,18:14:504:18:636:-47.9351,0,-36.0651	0/0:123:123,0:123:4397:0:0:0,-37.0267,-395.902	0/0:217:217,0:217:7757:0:0:0,-65.3235,-698.161	0/1:70:22,48:22:792:48:1699:-132.123,0,-50.5336	0/0:99:99,0:99:3552:0:0:0,-29.802,-319.888	0/1:35:19,16:19:684:16:576:-41.6389,0,-51.3543	0/0:103:103,0:103:3692:0:0:0,-31.0061,-332.482	0/1:290:138,152:138:4922:152:5379:-396.902,0,-355.255	0/0:240:240,0:240:8602:0:0:0,-72.2472,-774.173	0/1:29:11,18:11:396:18:639:-49.1002,0,-27.2529	0/0:270:270,0:270:9649:0:0:0,-81.2781,-868.363	0/0:121:121,0:121:4335:0:0:0,-36.4246,-390.324	0/0:146:146,0:146:5196:0:0:0,-43.9504,-467.78	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:27:19,8:19:680:8:280:-17.4115,0,-53.4014	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/0:195:195,0:195:6999:0:0:0,-58.7008,-629.97	0/1:155:75,80:75:2688:80:2821:-207.471,0,-195.505	0/1:57:25,32:25:887:32:1117:-83.6765,0,-62.9894	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:92:58,34:58:2080:34:1195:-80.159,0,-159.776	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/1:133:61,71:61:2179:71:2505:-185.745,0,-156.427	0/1:52:28,24:28:1008:24:843:-60.5344,0,-75.3828	0/0:57:57,0:57:2032:0:0:0,-17.1587,-183.153	0/0:120:119,1:119:4280:1:36:0,-32.5253,-381.288	0/0:72:72,0:72:2564:0:0:0,-21.6742,-231.011	0/0:130:130,0:130:4637:0:0:0,-39.1339,-417.49	0/0:92:92,0:92:3286:0:0:0,-27.6948,-295.959	0/0:120:119,0:119:4268:0:0:0,-35.8226,-383.938	0/0:84:84,0:84:3024:0:0:0,-25.2865,-272.389	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:107:52,55:52:1852:55:1946:-143.205,0,-134.75	0/1:75:32,43:32:1144:43:1510:-113.614,0,-80.6877	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:142:73,69:73:2619:69:2448:-177.83,0,-193.21	0/0:42:42,0:42:1489:0:0:0,-12.6433,-134.303	0/1:4:3,1:3:108:1:32:-1.99519,0,-8.87105	0/1:30:15,15:15:536:15:536:-39.5439,0,-39.5439	0/1:117:57,60:57:2040:60:2139:-157.557,0,-148.652	0/1:95:47,48:47:1692:48:1683:-123.157,0,-123.969	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/0:185:185,0:185:6585:0:0:0,-55.6905,-592.731	0/1:159:95,64:95:3408:64:2256:-155.439,0,-259.07	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/0:71:71,0:71:2543:0:0:0,-21.3731,-229.12	0/0:151:149,2:149:5337:2:72:0,-38.6188,-473.624	0/1:135:47,88:47:1684:88:3128:-241.109,0,-111.208	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.818	0/0:70:70,0:70:2507:0:0:0,-21.0721,-225.882	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/1:248:126,122:126:4498:122:4326:-314.863,0,-330.333	0/1:126:72,54:72:2588:54:1893:-132.717,0,-195.238	0/0:207:207,0:207:7392:0:0:0,-62.3132,-665.327	0/1:213:130,83:130:4668:83:2930:-199.817,0,-356.16	0/1:76:38,38:38:1350:38:1342:-98.2003,0,-98.9205	0/0:79:77,2:77:2760:2:68:0,-17.3237,-242.184	0/1:21:12,9:12:432:9:324:-23.1842,0,-32.8996	0/1:107:63,44:63:2264:44:1566:-109.017,0,-171.812	0/0:77:76,1:76:2712:1:36:0,-19.581,-240.656	0/0:240:240,0:240:8585:0:0:0,-72.2472,-772.646	0/1:42:22,20:22:792:20:720:-52.4855,0,-58.9624	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.76	0/1:40:18,22:18:644:22:779:-58.3909,0,-46.2494	0/0:147:145,2:145:5191:2:72:0,-37.4147,-460.492	0/1:23:11,12:11:396:12:419:-31.119,0,-29.0591	0/1:70:38,32:38:1368:32:1126:-80.5745,0,-102.349	0/0:57:57,0:57:2036:0:0:0,-17.1587,-183.512	0/1:35:15,20:15:540:20:712:-53.8706,0,-38.4005	0/1:86:50,36:50:1792:36:1257:-87.5414,0,-135.674	0/1:55:22,33:22:792:33:1167:-88.7798,0,-55.049	0/0:125:125,0:125:4480:0:0:0,-37.6287,-403.369	0/0:94:94,0:94:3364:0:0:0,-28.2968,-302.976
chr03	27197321	.	ACG	ACT,TCT	211225	PASS	AB=0.468904,0.529083;ABP=40.5539,35.8496;AC=140,48;AF=0.744681,0.255319;AN=188;AO=7314,2389;CIGAR=2M1X,1X1M1X;DP=9726;DPB=9726.33;DPRA=0,0.892466;EPP=14927.2,4891.11;EPPR=0;GTI=1;LEN=1,3;MEANALT=1.79787,2.24528;MQM=59.1529,47.4977;MQMR=0;NS=94;NUMALT=2;ODDS=4.26778;PAIRED=0,0;PAIREDR=0;PAO=0,1;PQA=0,36;PQR=0;PRO=0;QA=258428,83311;QR=0;RO=0;RPL=7203,2354;RPP=14935.7,4891.11;RPPR=0;RPR=111,35;RUN=1,1;SAF=1,0;SAP=15876.5,5190.66;SAR=7313,2389;SRF=0;SRP=0;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:34:0,20,14:0:0:20,14:716,476:-96.7032,-38.4071,-32.3865,-58.6407,0,-54.4263	1/2:229:0,113,116:0:0:113,116:4008,4062:-650.723,-324.388,-290.371,-326.685,0,-291.766	1/2:119:0,38,81:0:0:38,81:1356,2819:-335.418,-224.891,-213.452,-110.879,0,-86.4957	1/1:197:0,196,0:0:0:196,0:6870,0:-617.48,-59.0019,0,-617.48,-59.0019,-617.48	1/1:64:0,64,0:0:0:64,0:2284,0:-205.748,-19.2659,0,-205.748,-19.2659,-205.748	1/1:83:0,83,0:0:0:83,0:2980,0:-268.194,-24.9855,0,-268.194,-24.9855,-268.194	1/2:139:0,66,73:0:0:66,73:2328,2495:-390.643,-201.132,-181.264,-189.857,0,-167.881	1/1:109:0,109,0:0:0:109,0:3823,0:-343.704,-32.8123,0,-343.704,-32.8123,-343.704	1/1:133:0,133,0:0:0:133,0:4760,0:-428.433,-40.037,0,-428.433,-40.037,-428.433	1/2:130:0,54,76:0:0:54,76:1872,2623:-364.098,-211.952,-195.696,-152.491,0,-129.613	1/2:102:0,49,53:0:0:49,53:1743,1870:-293.417,-151.382,-136.632,-142.388,0,-126.433	1/2:86:0,49,37:0:0:49,37:1748,1304:-246.246,-103.93,-89.1791,-142.666,0,-131.528	1/1:100:0,100,0:0:0:100,0:3573,0:-321.655,-30.103,0,-321.655,-30.103,-321.655	1/1:122:0,122,0:0:0:122,0:4354,0:-391.884,-36.7257,0,-391.884,-36.7257,-391.884	1/1:73:0,73,0:0:0:73,0:2588,0:-233.011,-21.9752,0,-233.011,-21.9752,-233.011	1/2:100:0,52,48:0:0:52,48:1856,1691:-287.687,-136.437,-120.784,-151.603,0,-137.153	1/2:91:0,53,38:0:0:53,38:1900,1339:-262.378,-107.514,-91.5598,-155.215,0,-143.776	1/1:77:0,76,0:0:0:76,0:2711,0:-243.648,-22.8783,0,-243.648,-22.8783,-243.648	1/2:77:0,40,37:0:0:40,37:1432,1294:-220.193,-103.545,-91.5041,-116.643,0,-105.505	1/1:187:0,185,1:0:0:185,1:6442,23:-579.139,-55.6906,0,-577.372,-53.9873,-577.071	1/1:202:0,202,0:0:0:202,0:7174,0:-645.013,-60.8081,0,-645.013,-60.8081,-645.013	1/2:69:0,16,52:0:0:16,52:560,1805:-191.424,-145.863,-141.046,-45.5515,0,-29.898	1/1:108:0,108,0:0:0:108,0:3813,0:-342.212,-32.5112,0,-342.212,-32.5112,-342.212	1/2:129:0,57,71:0:0:57,71:2007,2496:-360.729,-197.428,-180.27,-163.291,0,-141.918	1/1:31:0,31,0:0:0:31,0:1081,0:-97.5647,-9.33193,0,-97.5647,-9.33193,-97.5647	1/2:238:0,122,116:0:0:122,116:4297,4039:-675.921,-326.164,-289.438,-350.106,0,-315.187	1/1:164:0,163,0:0:0:163,0:5761,0:-517.98,-49.0679,0,-517.98,-49.0679,-517.98	1/2:41:0,24,17:0:0:24,17:852,594:-117.755,-48.3295,-41.1048,-69.7757,0,-64.6582	1/1:194:0,194,0:0:0:194,0:6835,0:-614.908,-58.3998,0,-614.908,-58.3998,-614.908	1/1:160:0,158,0:0:0:158,0:5581,0:-500.754,-47.5627,0,-500.754,-47.5627,-500.754	1/1:152:0,152,0:0:0:152,0:5385,0:-484.486,-45.7566,0,-484.486,-45.7566,-484.486	1/1:12:0,12,0:0:0:12,0:409,0:-37.135,-3.61236,0,-37.135,-3.61236,-37.135	1/2:20:0,4,16:0:0:4,16:144,571:-58.3343,-46.5836,-45.3795,-12.1095,0,-7.29302	1/2:9:0,3,6:0:0:3,6:108,210:-25.7292,-16.9113,-16.0082,-9.17114,0,-7.36496	1/1:9:0,9,0:0:0:9,0:304,0:-27.6729,-2.70927,0,-27.6729,-2.70927,-27.6729	1/1:20:0,20,0:0:0:20,0:708,0:-63.7364,-6.0206,0,-63.7364,-6.0206,-63.7364	1/1:186:0,185,0:0:0:185,0:6512,0:-585.504,-55.6906,0,-585.504,-55.6906,-585.504	1/2:162:0,69,91:0:0:69,91:2403,3177:-450.874,-255.658,-234.887,-195.235,0,-167.841	1/2:133:0,80,53:0:0:80,53:2860,1873:-382.434,-149.392,-125.309,-233.393,0,-217.438	1/2:6:0,4,2:0:0:4,2:144,72:-17.916,-6.18746,-4.98334,-12.0865,0,-11.4845	1/2:148:0,67,81:0:0:67,81:2353,2840:-420.539,-229.171,-209.002,-191.717,0,-167.334	1/1:70:0,70,0:0:0:70,0:2458,0:-221.366,-21.0721,0,-221.366,-21.0721,-221.366	1/2:129:0,54,74:0:0:54,74:1897,2583:-362.328,-208.036,-191.78,-154.316,0,-132.039	1/2:79:0,39,40:0:0:39,40:1396,1396:-227.152,-113.324,-101.584,-114.181,0,-102.139	1/1:72:0,72,0:0:0:72,0:2568,0:-231.083,-21.6742,0,-231.083,-21.6742,-231.083	1/1:88:0,88,0:0:0:88,0:3120,0:-280.963,-26.4906,0,-280.963,-26.4906,-280.963	1/1:124:0,124,0:0:0:124,0:4412,0:-396.747,-37.3277,0,-396.747,-37.3277,-396.747	1/1:109:0,109,0:0:0:109,0:3888,0:-350.012,-32.8123,0,-350.012,-32.8123,-350.012	1/1:81:0,80,1:0:0:80,1:2824,34:-253.962,-24.0824,0,-251.213,-20.9942,-250.912	1/1:115:0,115,0:0:0:115,0:4034,0:-363.118,-34.6185,0,-363.118,-34.6185,-363.118	1/1:205:0,205,0:0:0:205,0:7125,0:-641.136,-61.7112,0,-641.136,-61.7112,-641.136	1/1:16:0,16,0:0:0:16,0:568,0:-51.4274,-4.81648,0,-51.4274,-4.81648,-51.4274	1/2:132:0,47,84:0:0:47,84:1634,2925:-367.026,-234.212,-220.064,-132.888,0,-107.602	1/2:59:0,26,33:0:0:26,33:917,1155:-168.6,-93.9339,-86.1071,-75.0169,0,-65.0829	1/2:25:0,17,8:0:0:17,8:604,259:-69.7955,-21.0284,-15.9109,-49.0981,0,-46.6898	1/2:146:0,67,78:0:0:67,78:2341,2699:-407.723,-217.45,-197.281,-190.262,0,-166.781	1/1:56:0,56,0:0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chr03	27561120	.	C	T	45981.8	PASS	AB=0.534683;ABP=55.1274;AC=50;AF=0.265957;AN=188;AO=2677;CIGAR=1X;DP=10068;DPB=10068;DPRA=0.971844;EPP=5816.04;EPPR=16045.8;GTI=0;LEN=1;MEANALT=1.01724;MQM=51.4662;MQMR=59.6477;NS=94;NUMALT=1;ODDS=0.64134;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96011;QR=264502;RO=7388;RPL=0;RPP=5816.04;RPPR=16045.8;RPR=2677;RUN=1;SAF=0;SAP=5816.04;SAR=2677;SRF=0;SRP=16045.8;SRR=7388;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:35,15:35:1256:15:525:-32.4115,0,-98.2938	0/1:194:92,102:92:3308:102:3672:-271.202,0,-239.521	0/1:150:55,95:55:1961:95:3405:-260.334,0,-131.608	0/0:123:123,0:123:4408:0:0:0,-37.0267,-396.478	0/1:96:42,54:42:1504:54:1944:-145.554,0,-106.737	0/1:120:57,63:57:2036:63:2264:-167.352,0,-147.119	0/1:122:67,55:67:2397:55:1980:-141.288,0,-179.242	0/0:102:102,0:102:3649:0:0:0,-30.7051,-328.577	0/0:133:132,0:132:4748:0:0:0,-39.736,-427.084	0/1:118:64,54:64:2281:54:1940:-138.918,0,-169.985	0/1:52:26,26:26:936:26:932:-67.9235,0,-68.8801	0/1:73:34,39:34:1220:39:1389:-102.934,0,-88.1316	0/0:79:79,0:79:2825:0:0:0,-23.7814,-254.471	0/0:98:98,0:98:3520:0:0:0,-29.5009,-316.834	0/1:68:36,32:36:1296:32:1152:-83.2444,0,-96.4657	0/1:43:18,25:18:648:25:896:-67.8165,0,-45.6912	0/1:86:34,52:34:1205:52:1872:-141.994,0,-82.8539	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.338	0/1:17:6,11:6:216:11:396:-30.7748,0,-14.6647	0/0:132:131,1:131:4685:1:36:0,-36.1467,-418.162	0/0:151:151,0:151:5394:0:0:0,-45.4555,-485.564	0/1:180:52,128:52:1849:128:4543:-353.056,0,-112.503	0/1:120:52,68:52:1848:68:2440:-182.864,0,-130.457	0/1:209:103,106:103:3651:106:3808:-277.186,0,-265.868	0/0:126:126,0:126:4502:0:0:0,-37.9298,-405.242	0/1:326:153,173:153:5469:173:6214:-458.182,0,-393.82	0/0:277:277,0:277:9932:0:0:0,-83.3853,-893.196	0/1:48:20,28:20:716:28:1008:-76.358,0,-50.3183	0/0:191:191,0:191:6848:0:0:0,-57.4967,-616.006	0/0:174:174,0:174:6245:0:0:0,-52.3792,-562.123	0/0:130:129,1:129:4617:1:36:0,-35.5447,-412.008	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:26:10,15:10:356:15:540:-40.7085,0,-24.4969	0/1:11:4,7:4:144:7:252:-19.6597,0,-10.0023	0/0:12:12,0:12:417:0:0:0,-3.61236,-37.86	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8424	0/0:219:218,0:218:7825:0:0:0,-65.6245,-703.631	0/1:257:143,114:143:5106:114:4052:-285.267,0,-382.099	0/1:56:32,24:32:1148:24:864:-60.3692,0,-86.7606	0/1:5:4,1:4:144:1:36:-2.08408,0,-11.8001	0/1:151:64,87:64:2300:87:3132:-235.572,0,-161.797	0/0:25:25,0:25:885:0:0:0,-7.52575,-79.9583	0/1:100:51,49:51:1832:49:1764:-128.541,0,-135.041	0/1:80:38,42:38:1368:42:1512:-111.871,0,-99.3058	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.849	0/0:110:110,0:110:3956:0:0:0,-33.1133,-356.212	0/0:137:137,0:137:4909:0:0:0,-41.2411,-441.84	0/0:189:189,0:189:6777:0:0:0,-56.8947,-609.958	0/0:164:163,1:163:5841:1:36:0,-45.7797,-521.873	0/0:135:135,0:135:4818:0:0:0,-40.639,-433.761	0/0:190:189,1:189:6750:1:36:0,-53.8496,-604.21	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:162:63,99:63:2268:99:3560:-270.132,0,-155.607	0/1:23:17,6:17:608:6:216:-12.5942,0,-48.1283	0/1:24:7,17:7:252:17:607:-47.5181,0,-15.796	0/1:122:62,60:62:2224:60:2156:-156.622,0,-163.698	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.745	0/1:20:8,12:8:288:12:432:-33.0925,0,-20.2468	0/1:48:27,21:27:972:21:756:-53.7364,0,-73.3485	0/1:153:72,81:72:2558:81:2916:-214.861,0,-184.374	0/1:121:73,48:73:2624:48:1720:-117.722,0,-199.941	0/1:11:6,5:6:216:5:176:-12.8371,0,-16.4792	0/0:118:118,0:118:4221:0:0:0,-35.5215,-380.059	0/1:237:98,139:98:3520:139:4977:-374.57,0,-245.262	0/0:94:93,1:93:3332:1:36:0,-24.7076,-296.467	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.776	0/0:155:152,3:152:5399:3:108:0,-36.6098,-475.953	0/1:87:28,59:28:989:59:2120:-163.745,0,-63.1324	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/0:120:120,0:120:4316:0:0:0,-36.1236,-388.263	0/0:100:100,0:100:3581:0:0:0,-30.103,-322.471	0/1:32:10,22:10:356:22:788:-61.2168,0,-22.7483	0/0:165:165,0:165:5893:0:0:0,-49.6699,-530.298	0/1:106:42,64:42:1482:64:2300:-174.623,0,-101.753	0/0:188:188,0:188:6722:0:0:0,-56.5936,-604.123	0/1:224:103,121:103:3700:121:4329:-320.676,0,-265.563	0/1:221:97,124:97:3488:124:4445:-331.72,0,-247.568	0/0:141:140,1:140:5028:1:36:0,-38.856,-449.043	0/1:21:8,13:8:273:13:468:-36.0313,0,-18.5783	0/1:98:52,46:52:1868:46:1652:-118.868,0,-138.898	0/0:111:111,0:111:3965:0:0:0,-33.4143,-356.999	0/0:194:194,0:194:6972:0:0:0,-58.3998,-627.5	0/1:113:64,49:64:2288:49:1764:-124.189,0,-172.123	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.609	0/1:90:44,46:44:1576:46:1641:-120.273,0,-115.039	0/0:150:149,1:149:5340:1:36:0,-41.5653,-477	0/1:41:23,18:23:824:18:633:-44.6913,0,-62.0266	0/1:74:35,39:35:1260:39:1400:-103.47,0,-91.3266	0/0:71:71,0:71:2537:0:0:0,-21.3731,-228.568	0/1:24:13,11:13:453:11:396:-28.6676,0,-33.646	0/1:91:46,45:46:1633:45:1615:-117.287,0,-119.847	0/1:87:30,57:30:1080:57:2052:-158.262,0,-71.3236	0/0:121:121,0:121:4325:0:0:0,-36.4246,-389.181	0/0:98:98,0:98:3505:0:0:0,-29.5009,-315.634
chr03	27564002	.	CCC	TCT,CCT	423845	PASS	AB=0.607253,0.388599;ABP=653.256,704.535;AC=139,49;AF=0.739362,0.260638;AN=188;AO=13642,2550;CIGAR=1X1M1X,2M1X;DP=16261;DPB=16262;DPRA=0,0.949558;EPP=29617.6,5540.26;EPPR=11.6962;GTI=5;LEN=3,1;MEANALT=2.34043,2.58462;MQM=59.3322,59.0212;MQMR=56.5;NS=94;NUMALT=2;ODDS=1.60165;PAIRED=0,0;PAIREDR=0;PAO=2,0.5;PQA=68,0;PQR=0;PRO=0.5;QA=470267,90504;QR=142;RO=4;RPL=7438,2333;RPP=245.396,3815.82;RPPR=3.0103;RPR=6204,217;RUN=1,1;SAF=7437,2333;SAP=244.611,3815.82;SAR=6205,217;SRF=2;SRP=3.0103;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:30:0,20,10:0:0:20,10:680,356:-84.4164,-29.3709,-23.3503,-55.3957,0,-52.3854	1/2:117:0,76,41:0:0:76,41:2598,1455:-329.034,-118.275,-95.3971,-211.107,0,-198.765	1/2:350:1,158,190:1:34:158,190:5502,6710:-990.498,-543.499,-498.694,-444.617,0,-390.179	1/1:482:0,479,1:0:0:479,1:16424,36:-1476.98,-144.193,0,-1474.04,-141.242,-1473.74	1/2:127:0,86,41:0:0:86,41:2986,1472:-362.428,-120.434,-94.5453,-242.349,0,-230.007	1/2:112:0,59,52:0:0:59,52:2050,1864:-318.789,-152.173,-134.412,-166.755,0,-151.101	1/2:218:0,127,89:0:0:127,89:4335,3166:-609.539,-257.845,-219.614,-351.728,0,-324.936	1/1:374:0,372,1:0:0:372,1:12831,36:-1153.42,-111.983,0,-1150.48,-109.046,-1150.18	1/1:250:0,248,2:0:0:248,2:8598,72:-772.755,-74.6554,0,-766.88,-68.4208,-766.278	1/2:140:0,114,25:0:0:114,25:3884,888:-386.823,-71.7664,-37.449,-315.162,0,-307.636	1/2:135:0,73,62:0:0:73,62:2518,2201:-384.235,-179.69,-157.715,-204.895,0,-186.231	1/2:168:0,115,52:0:0:115,52:3981,1847:-474.014,-150.576,-115.957,-323.511,0,-307.857	1/1:169:0,168,0:0:0:168,0:5882,0:-528.373,-50.573,0,-528.373,-50.573,-528.373	1/1:174:0,173,1:0:0:173,1:6011,36:-540.591,-52.0782,0,-537.654,-48.7809,-537.353	1/2:89:0,61,28:0:0:61,28:2092,1004:-252.077,-82.247,-63.8842,-170.183,0,-161.754	1/2:107:0,66,41:0:0:66,41:2284,1447:-303.724,-118.183,-98.3149,-185.891,0,-173.549	1/2:105:0,74,31:0:0:74,31:2492,1084:-290.345,-88.5345,-66.2583,-202.156,0,-192.824	1/1:93:0,92,0:0:0:92,0:3175,0:-285.45,-27.6948,0,-285.45,-27.6948,-285.45	1/2:87:0,56,31:0:0:56,31:1945,1097:-247.729,-89.7061,-72.8484,-158.374,0,-149.042	1/1:250:0,247,1:0:0:247,1:8610,36:-774.576,-74.3544,0,-771.639,-71.3904,-771.338	1/1:272:0,272,0:0:0:272,0:9333,0:-839.702,-81.8802,0,-839.702,-81.8802,-839.702	1/2:131:0,49,82:0:0:49,82:1698,2888:-372.582,-234.579,-219.829,-138.351,0,-113.667	1/2:173:0,94,77:0:0:94,77:3238,2732:-485.58,-222.656,-194.359,-262.991,0,-239.812	1/2:112:0,73,38:0:0:73,38:2528,1330:-313.537,-108.199,-86.2238,-205.328,0,-193.888	1/1:173:0,172,0:0:0:172,0:6005,0:-540.23,-51.7772,0,-540.23,-51.7772,-540.23	1/2:428:0,212,214:0:0:212,214:7292,7569:-1206.15,-614.354,-550.536,-591.898,0,-527.478	1/1:605:0,599,1:0:0:599,1:20846,36:-1874.87,-180.317,0,-1871.93,-177.371,-1871.63	1/2:64:0,46,18:0:0:46,18:1557,627:-177.494,-51.3359,-37.4885,-126.503,0,-121.085	1/1:431:0,428,0:0:0:428,0:14854,0:-1335.88,-128.841,0,-1335.88,-128.841,-1335.88	1/1:244:0,243,0:0:0:243,0:8296,0:-746.29,-73.1503,0,-746.29,-73.1503,-746.29	1/1:180:0,180,0:0:0:180,0:6196,0:-557.659,-54.1854,0,-557.659,-54.1854,-557.659	1/1:10:0,10,0:0:0:10,0:346,0:-31.4734,-3.0103,0,-31.4734,-3.0103,-31.4734	1/2:28:0,11,16:0:0:11,16:343,559:-72.9904,-45.4619,-42.1506,-27.4993,0,-22.6828	1/2:8:0,5,3:0:0:5,3:180,108:-23.8582,-9.17208,-7.66693,-15.046,0,-14.1429	1/1:21:0,21,0:0:0:21,0:712,0:-64.3815,-6.32163,0,-64.3815,-6.32163,-64.3815	1/1:16:0,16,0:0:0:16,0:571,0:-51.7176,-4.81648,0,-51.7176,-4.81648,-51.7176	1/1:416:0,413,2:0:0:413,2:14189,72:-1276.08,-124.325,0,-1270.21,-118.451,-1269.61	1/2:165:0,122,43:0:0:122,43:4181,1529:-464.348,-124.957,-88.2311,-339.744,0,-326.799	1/2:125:0,84,41:0:0:84,41:2882,1448:-352.201,-118.273,-92.986,-234.278,0,-221.936	1/2:5:0,3,2:0:0:3,2:93,72:-13.6623,-6.23466,-5.33157,-7.76739,0,-7.16533	1/2:199:0,164,34:0:0:164,34:5602,1199:-552.258,-97.6964,-48.3275,-454.63,0,-444.395	1/1:70:0,70,0:0:0:70,0:2410,0:-217.041,-21.0721,0,-217.041,-21.0721,-217.041	1/2:235:1,134,100:1:36:134,100:4645,3569:-665.078,-288.016,-250.616,-374.418,0,-347.253	1/2:121:0,90,31:0:0:90,31:3120,1108:-344.257,-90.6991,-63.6064,-253.913,0,-244.581	1/1:149:0,147,0:0:0:147,0:5031,0:-452.505,-44.2514,0,-452.505,-44.2514,-452.505	1/1:214:0,212,1:0:0:212,1:7233,32:-650.672,-63.8184,0,-648.094,-61.259,-647.793	1/1:232:0,232,0:0:0:232,0:7944,0:-714.872,-69.839,0,-714.872,-69.839,-714.872	1/1:265:0,263,0:0:0:263,0:9030,0:-812.249,-79.1709,0,-812.249,-79.1709,-812.249	1/1:218:0,216,1:0:0:216,1:7386,36:-664.308,-65.0225,0,-661.371,-62.0835,-661.07	1/1:191:0,191,0:0:0:191,0:6597,0:-593.36,-57.4967,0,-593.36,-57.4967,-593.36	1/1:207:0,207,0:0:0:207,0:7179,0:-646.183,-62.3132,0,-646.183,-62.3132,-646.183	1/1:8:0,8,0:0:0:8,0:276,0:-25.1686,-2.40824,0,-25.1686,-2.40824,-25.1686	1/2:201:0,128,72:0:0:128,72:4476,2562:-572.806,-208.803,-170.271,-364.005,0,-342.331	1/2:103:0,39,64:0:0:39,64:1342,2280:-294.649,-185.664,-173.924,-109.333,0,-90.0671	1/1:13:0,12,1:0:0:12,1:374,36:-33.5828,-3.61236,0,-30.6416,-0.315115,-30.3406	1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chr03	27564016	.	A	T	42243.1	PASS	AB=0.396439;ABP=589.045;AC=49;AF=0.260638;AN=188;AO=2504;CIGAR=1X;DP=15607;DPB=15607;DPRA=0.710688;EPP=5414.35;EPPR=28092;GTI=5;LEN=1;MEANALT=1.06897;MQM=59.0359;MQMR=59.3463;NS=94;NUMALT=1;ODDS=4.86235;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88724;QR=465819;RO=13091;RPL=2304;RPP=3841.95;RPPR=218.96;RPR=200;RUN=1;SAF=2301;SAP=3820.09;SAR=203;SRF=7077;SRP=190.444;SRR=6014;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:28:19,9:19:672:9:316:-20.35,0,-52.2012	0/1:110:71,39:71:2540:39:1362:-89.7636,0,-195.598	0/1:337:150,184:150:5311:184:6563:-489.85,0,-376.921	0/0:464:462,1:462:16474:1:36:0,-136.138,-1477.22	0/1:124:83,41:83:2968:41:1429:-91.5732,0,-229.244	0/1:109:59,50:59:2094:50:1769:-126.679,0,-155.859	0/1:210:120,90:120:4288:90:3223:-226.863,0,-322.805	0/0:349:348,1:348:12323:1:36:0,-101.461,-1104.38	0/0:243:242,1:242:8581:1:36:0,-69.552,-768.002	0/1:137:113,24:113:4025:24:835:-33.5227,0,-321.096	0/1:133:72,61:72:2553:61:2150:-153.73,0,-189.983	0/1:161:107,54:107:3793:54:1918:-124.43,0,-292.874	0/0:166:166,0:166:5911:0:0:0,-49.971,-529.841	0/0:169:169,0:169:6035:0:0:0,-50.8741,-542.969	0/1:85:57,28:57:2023:28:993:-64.095,0,-156.743	0/1:100:63,37:63:2252:37:1311:-88.1879,0,-172.76	0/1:102:70,32:70:2508:32:1124:-70.7547,0,-195.088	0/0:90:90,0:90:3208:0:0:0,-27.0927,-288.441	0/1:88:56,31:56:1986:31:1108:-73.4816,0,-152.361	0/0:239:238,1:238:8454:1:36:0,-68.3479,-757.233	0/0:254:254,0:254:9020:0:0:0,-76.4616,-811.386	0/1:130:49,81:49:1756:81:2865:-218.14,0,-119.19	0/1:167:87,80:87:3076:80:2828:-204.482,0,-226.578	0/1:113:72,41:72:2565:41:1460:-97.6796,0,-196.883	0/0:159:159,0:159:5672:0:0:0,-47.8638,-510.456	0/1:419:209,210:209:7466:210:7431:-539.38,0,-545.392	0/0:568:568,0:568:20191:0:0:0,-170.985,-1816.38	0/1:58:42,16:42:1504:16:551:-32.4548,0,-118.099	0/0:415:415,0:415:14769:0:0:0,-124.927,-1327.85	0/0:236:234,0:234:8338:0:0:0,-70.441,-749.922	0/0:172:172,0:172:6110:0:0:0,-51.7772,-549.839	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:24:9,15:9:324:15:540:-41.7118,0,-22.2695	0/1:9:5,4:5:176:4:135:-9.77324,0,-13.4748	0/0:19:19,0:19:676:0:0:0,-5.71957,-60.97	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.1686	0/0:403:402,0:402:14309:0:0:0,-121.014,-1286.21	0/1:161:117,44:117:4175:44:1551:-91.4152,0,-327.462	0/1:122:82,40:82:2899:40:1393:-88.9393,0,-224.274	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.52358	0/1:189:154,35:154:5496:35:1230:-54.1066,0,-437.791	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.238	0/1:220:126,94:126:4494:94:3360:-236.39,0,-338.175	0/1:115:84,31:84:2999:31:1090:-63.7895,0,-235.153	0/0:137:137,0:137:4859:0:0:0,-41.2411,-437.32	0/0:207:206,0:206:7334:0:0:0,-62.0122,-659.647	0/0:224:224,0:224:7977:0:0:0,-67.4307,-717.655	0/0:249:249,0:249:8849:0:0:0,-74.9565,-796.127	0/0:209:208,1:208:7410:1:36:0,-59.317,-663.171	0/0:177:177,0:177:6294:0:0:0,-53.2823,-566.211	0/0:200:200,0:200:7164:0:0:0,-60.206,-644.782	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9008	0/1:196:125,71:125:4449:71:2526:-168.589,0,-340.862	0/1:99:39,60:39:1384:60:2103:-159.236,0,-95.0569	0/0:12:11,1:11:392:1:36:0,-0.0140849,-31.9153	0/1:195:118,77:118:4193:77:2756:-189.581,0,-318.789	0/0:72:71,1:71:2531:1:36:0,-18.0759,-224.41	0/1:23:10,13:10:356:13:456:-34.3306,0,-25.4576	0/1:24:8,16:8:288:16:561:-43.4012,0,-19.0427	0/1:181:106,75:106:3796:75:2684:-187.262,0,-286.634	0/1:171:118,53:118:4157:53:1883:-118.271,0,-322.782	0/1:16:4,12:4:144:12:424:-33.6799,0,-8.49714	0/0:310:310,0:310:10997:0:0:0,-93.3193,-989.183	0/1:219:138,81:138:4917:81:2896:-194.95,0,-376.542	0/0:156:156,0:156:5499:0:0:0,-46.9607,-494.476	0/0:172:172,0:172:6152:0:0:0,-51.7772,-553.666	0/0:272:272,0:272:9708:0:0:0,-81.8802,-872.207	0/1:254:98,156:98:3480:156:5514:-419.927,0,-236.912	0/0:109:109,0:109:3895:0:0:0,-32.8123,-348.879	0/0:132:132,0:132:4713:0:0:0,-39.736,-424.045	0/0:131:131,0:131:4662:0:0:0,-39.4349,-419.628	0/1:45:28,17:28:989:17:600:-40.7828,0,-75.7726	0/0:208:208,0:208:7420:0:0:0,-62.6142,-667.157	0/1:80:49,31:49:1748:31:1086:-73.9652,0,-133.354	0/0:461:459,0:459:16287:0:0:0,-138.173,-1464.87	0/1:183:136,47:136:4838:47:1680:-96.3986,0,-380.336	0/1:222:128,94:128:4554:94:3321:-232.27,0,-343.14	0/0:227:227,0:227:8065:0:0:0,-68.3338,-725.225	0/1:11:10,1:10:352:1:36:-0.286945,0,-28.6619	0/1:191:135,56:135:4806:56:1996:-122.395,0,-375.059	0/0:205:205,0:205:7238:0:0:0,-61.7111,-650.318	0/0:432:432,0:432:15361:0:0:0,-130.045,-1382.02	0/1:93:69,24:69:2460:24:856:-48.6626,0,-193.625	0/0:138:138,0:138:4915:0:0:0,-41.5421,-442.386	0/1:96:77,19:77:2738:19:684:-32.9881,0,-217.577	0/0:270:268,2:268:9549:2:72:0,-74.4414,-852.259	0/1:28:25,3:25:888:3:100:-0.901601,0,-71.6132	0/1:106:65,41:65:2316:41:1464:-100.147,0,-176.549	0/0:134:134,0:134:4788:0:0:0,-40.338,-430.794	0/1:92:58,34:58:2046:34:1190:-79.7088,0,-156.669	0/1:225:129,96:129:4620:96:3413:-239.652,0,-348.186	0/1:85:41,44:41:1464:44:1528:-112.221,0,-106.469	0/0:182:180,1:180:6389:1:36:0,-51.248,-571.333	0/0:242:242,0:242:8614:0:0:0,-72.8493,-775.155
chr03	27599245	.	C	T	54915.2	PASS	AB=0.523708;ABP=32.663;AC=49;AF=0.260638;AN=188;AO=3194;CIGAR=1X;DP=13315;DPB=13315;DPRA=0.881979;EPP=6938.69;EPPR=21924.1;GTI=1;LEN=1;MEANALT=1.01754;MQM=59.8835;MQMR=59.9692;NS=94;NUMALT=1;ODDS=1.98886;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=114467;QR=361259;RO=10119;RPL=0;RPP=6938.69;RPPR=21924.1;RPR=3194;RUN=1;SAF=3194;SAP=6938.69;SAR=0;SRF=10119;SRP=21976.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:39:19,20:19:684:20:716:-53.0252,0,-50.1502	0/1:276:133,143:133:4738:143:5129:-378.58,0,-343.493	0/1:249:119,130:119:4243:130:4647:-343.425,0,-307.094	0/0:291:290,1:290:10370:1:36:0,-84.0015,-929.624	0/1:162:69,93:69:2476:93:3340:-252.05,0,-174.327	0/1:86:57,29:57:2036:29:1019:-66.1327,0,-156.686	0/1:246:148,98:148:5287:98:3524:-243.314,0,-401.913	0/0:265:265,0:265:9384:0:0:0,-79.7729,-844.53	0/0:135:134,1:134:4804:1:36:0,-37.0408,-428.916	0/1:185:78,107:78:2785:107:3852:-291.181,0,-195.198	0/1:68:30,38:30:1080:38:1342:-100.597,0,-77.0432	0/1:89:39,50:39:1404:50:1800:-135.491,0,-99.8676	0/0:79:79,0:79:2811:0:0:0,-23.7814,-253.23	0/0:79:79,0:79:2823:0:0:0,-23.7814,-254.309	0/1:71:41,30:41:1468:30:1080:-76.1335,0,-111.043	0/1:61:33,28:33:1184:28:1004:-72.313,0,-88.5055	0/1:87:52,35:52:1872:35:1252:-86.7955,0,-142.565	0/0:67:67,0:67:2399:0:0:0,-20.169,-216.166	0/1:49:23,26:23:824:26:932:-69.4484,0,-59.7328	0/0:339:339,0:339:12153:0:0:0,-102.049,-1093.61	0/0:230:230,0:230:8195:0:0:0,-69.2369,-737.557	0/1:145:49,96:49:1722:96:3435:-265.566,0,-111.612	0/1:118:64,54:64:2273:54:1940:-139.35,0,-169.309	0/1:239:121,118:121:4329:118:4228:-308.751,0,-317.838	0/0:94:94,0:94:3371:0:0:0,-28.2968,-303.605	0/1:534:218,316:218:7785:316:11337:-859.323,0,-539.931	0/0:270:270,0:270:9643:0:0:0,-81.2781,-867.047	0/1:46:25,21:25:900:21:752:-54.1589,0,-67.4736	0/0:437:437,0:437:15617:0:0:0,-131.55,-1405.23	0/0:143:143,0:143:5128:0:0:0,-43.0473,-461.66	0/0:163:163,0:163:5832:0:0:0,-49.0679,-524.974	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/1:6:4,2:4:140:2:72:-5.03054,0,-11.1384	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:195:194,0:194:6940:0:0:0,-58.3998,-623.52	0/1:235:118,116:118:4194:116:4156:-303.568,0,-306.991	0/1:73:34,39:34:1220:39:1400:-104.322,0,-88.1316	0/1:12:2,10:2:72:10:360:-29.1319,0,-3.22436	0/1:298:178,120:178:6313:120:4296:-297.065,0,-478.561	0/0:33:33,0:33:1167:0:0:0,-9.93399,-105.336	0/1:270:130,140:130:4640:140:5016:-370.251,0,-336.486	0/1:85:33,52:33:1184:52:1867:-142.634,0,-81.2808	0/0:65:65,0:65:2314:0:0:0,-19.5669,-208.519	0/0:122:122,0:122:4360:0:0:0,-36.7257,-392.575	0/0:152:151,1:151:5400:1:36:0,-42.1583,-482.533	0/0:269:269,0:269:9603:0:0:0,-80.9771,-864.227	0/0:176:176,0:176:6312:0:0:0,-52.9813,-568.142	0/0:263:263,0:263:9424:0:0:0,-79.1709,-848.12	0/0:199:199,0:199:7121:0:0:0,-59.905,-640.946	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:198:100,98:100:3580:98:3488:-254.526,0,-262.803	0/1:35:18,17:18:644:17:612:-44.8774,0,-47.7545	0/1:23:9,14:9:320:14:504:-38.7744,0,-22.2187	0/1:258:119,139:119:4218:139:4989:-371.487,0,-302.138	0/0:74:74,0:74:2648:0:0:0,-22.2762,-238.567	0/1:11:6,5:6:201:5:180:-13.2407,0,-15.1057	0/1:28:17,11:17:612:11:396:-27.5539,0,-46.9846	0/1:147:63,84:63:2245:84:3012:-227.041,0,-158.06	0/1:96:47,49:47:1688:49:1755:-129.334,0,-123.308	0/1:12:6,6:6:216:6:216:-16.1777,0,-16.1782	0/0:254:254,0:254:9047:0:0:0,-76.4616,-814.079	0/0:268:262,6:262:9276:6:216:0,-60.8855,-814.651	0/0:125:125,0:125:4464:0:0:0,-37.6287,-401.931	0/0:184:184,0:184:6588:0:0:0,-55.3895,-592.984	0/0:250:249,1:249:8859:1:36:0,-71.6592,-793.702	0/1:150:51,99:51:1813:99:3538:-273.469,0,-118.295	0/0:19:18,1:18:644:1:36:0,-2.12129,-54.6923	0/0:126:126,0:126:4512:0:0:0,-37.9298,-406.248	0/0:95:95,0:95:3412:0:0:0,-28.5978,-307.293	0/1:26:9,17:9:324:17:612:-47.569,0,-21.6791	0/0:103:103,0:103:3661:0:0:0,-31.0061,-329.694	0/1:90:50,40:50:1779:40:1440:-102.805,0,-133.299	0/0:332:331,1:331:11796:1:36:0,-96.3437,-1057.87	0/1:296:131,165:131:4669:165:5914:-443.254,0,-331.267	0/1:176:80,96:80:2872:96:3440:-256.832,0,-205.735	0/0:172:172,0:172:6132:0:0:0,-51.7772,-551.981	0/1:23:10,13:10:356:13:468:-35.536,0,-25.4576	0/1:221:110,111:110:3924:111:3973:-291.228,0,-286.827	0/0:190:190,0:190:6755:0:0:0,-57.1957,-608.029	0/0:354:354,0:354:12629:0:0:0,-106.565,-1136.43	0/1:129:65,64:65:2332:64:2300:-168.427,0,-171.307	0/0:92:92,0:92:3296:0:0:0,-27.6948,-296.854	0/1:107:47,60:47:1675:60:2138:-160.476,0,-118.826	0/0:149:148,1:148:5287:1:36:0,-41.2552,-472.368	0/1:43:20,23:20:720:23:824:-61.539,0,-52.1845	0/1:71:34,37:34:1224:37:1324:-98.089,0,-89.0939	0/0:73:73,0:73:2593:0:0:0,-21.9752,-233.618	0/1:47:19,28:19:676:28:1008:-76.8879,0,-47.0196	0/1:84:36,48:36:1287:48:1716:-129.436,0,-90.8463	0/1:64:24,40:24:856:40:1440:-110.631,0,-58.0952	0/0:175:175,0:175:6233:0:0:0,-52.6802,-561.066	0/0:107:107,0:107:3840:0:0:0,-32.2102,-345.795
chr03	27599257	.	T	A	54579.9	PASS	AB=0.528402;ABP=45.0728;AC=49;AF=0.260638;AN=188;AO=3194;CIGAR=1X;DP=13122;DPB=13122;DPRA=1.00418;EPP=6921.33;EPPR=20650.3;GTI=1;LEN=1;MEANALT=1.03125;MQM=59.8626;MQMR=59.9771;NS=94;NUMALT=1;ODDS=0.106153;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=113845;QR=354699;RO=9924;RPL=2;RPP=6921.33;RPPR=20650.3;RPR=3192;RUN=1;SAF=3194;SAP=6938.69;SAR=0;SRF=9924;SRP=21552.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:19,19:19:676:19:684:-50.4488,0,-49.7289	0/1:273:130,143:130:4587:143:5082:-375.255,0,-330.813	0/1:249:120,128:120:4296:128:4552:-334.831,0,-311.802	0/0:285:284,1:284:10100:1:36:0,-82.1953,-905.34	0/1:164:68,96:68:2440:96:3418:-258.464,0,-170.486	0/1:85:56,29:56:2003:29:1032:-67.6059,0,-154.955	0/1:240:141,99:141:5052:99:3533:-245.93,0,-382.578	0/0:263:263,0:263:9407:0:0:0,-79.1709,-846.591	0/0:134:133,1:133:4696:1:36:0,-36.7397,-419.204	0/1:186:79,107:79:2824:107:3815:-287.555,0,-198.405	0/1:67:29,38:29:1044:38:1364:-102.881,0,-74.1058	0/1:88:38,50:38:1360:50:1796:-135.432,0,-96.21	0/0:76:76,0:76:2712:0:0:0,-22.8783,-244.324	0/0:75:75,0:75:2653:0:0:0,-22.5772,-239.013	0/1:72:42,30:42:1512:30:1076:-75.4721,0,-114.7	0/1:61:33,28:33:1172:28:1008:-72.6735,0,-87.4247	0/1:85:49,36:49:1737:36:1296:-91.356,0,-131.02	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.778	0/1:48:22,26:22:780:26:917:-68.3952,0,-56.0736	0/0:336:336,0:336:12044:0:0:0,-101.146,-1083.8	0/0:232:232,0:232:8270:0:0:0,-69.839,-744.285	0/1:145:48,97:48:1720:97:3394:-262.006,0,-111.436	0/1:122:64,58:64:2292:58:2068:-149.649,0,-169.816	0/1:235:121,114:121:4316:114:4061:-294.934,0,-317.873	0/0:95:95,0:95:3412:0:0:0,-28.5978,-307.289	0/1:527:215,312:215:7700:312:11080:-838.406,0,-534.391	0/0:265:264,0:264:9441:0:0:0,-79.4719,-849.366	0/1:46:25,21:25:900:21:756:-54.5198,0,-67.4736	0/0:434:433,1:433:15497:1:36:0,-127.049,-1390.83	0/0:144:144,0:144:5129:0:0:0,-43.3483,-461.752	0/0:156:155,1:155:5524:1:21:0,-44.8612,-495.186	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:196:196,0:196:7008:0:0:0,-59.0019,-629.848	0/1:235:119,116:119:4260:116:4160:-303.838,0,-312.837	0/1:73:34,39:34:1216:39:1392:-103.601,0,-87.7714	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	0/1:291:172,119:172:6148:119:4260:-295.934,0,-465.821	0/0:32:32,0:32:1139:0:0:0,-9.63296,-102.818	0/1:265:128,137:128:4567:137:4878:-359.396,0,-331.423	0/1:83:32,51:32:1148:51:1832:-140.088,0,-78.6443	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.78	0/0:121:121,0:121:4320:0:0:0,-36.4246,-388.976	0/0:151:150,1:150:5372:1:36:0,-41.8573,-480.013	0/0:260:258,1:258:9209:1:30:0,-75.2421,-825.808	0/0:180:180,0:180:6451:0:0:0,-54.1854,-580.671	0/0:262:262,0:262:9361:0:0:0,-78.8699,-842.455	0/0:195:195,0:195:6968:0:0:0,-58.7008,-627.186	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:198:101,97:101:3601:97:3472:-253.088,0,-264.692	0/1:34:17,17:17:608:17:612:-45.1784,0,-44.817	0/1:23:9,14:9:316:14:504:-38.7744,0,-21.8552	0/1:256:117,139:117:4179:139:4968:-370.194,0,-299.229	0/0:75:75,0:75:2654:0:0:0,-22.5772,-239.104	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/1:27:16,11:16:576:11:396:-27.8549,0,-44.0472	0/1:141:58,83:58:2080:83:2953:-223.555,0,-145.025	0/1:96:46,50:46:1648:50:1788:-132.303,0,-119.71	0/1:11:5,6:5:180:6:212:-16.1131,0,-13.2407	0/0:249:248,1:248:8858:1:25:0,-72.4734,-794.721	0/0:262:255,7:255:9116:7:241:0,-56.9538,-798.482	0/0:119:118,1:118:4223:1:28:0,-33.0228,-377.45	0/0:180:180,0:180:6437:0:0:0,-54.1854,-579.412	0/0:239:238,1:238:8497:1:36:0,-68.3479,-761.134	0/1:147:48,99:48:1716:99:3531:-273.737,0,-110.474	0/0:18:17,1:17:608:1:36:0,-1.82026,-51.4537	0/0:121:121,0:121:4332:0:0:0,-36.4246,-390.056	0/0:89:88,0:88:3132:0:0:0,-26.4906,-281.807	0/1:25:9,16:9:320:16:568:-43.9227,0,-21.6166	0/0:104:103,1:103:3672:1:29:0,-28.4075,-327.783	0/1:82:43,39:43:1536:39:1396:-101.255,0,-113.849	0/0:318:316,2:316:11296:2:59:0,-90.1283,-1010.91	0/1:296:131,165:131:4700:165:5895:-441.47,0,-334.054	0/1:172:77,95:77:2735:95:3373:-252.009,0,-194.616	0/0:174:174,0:174:6224:0:0:0,-52.3792,-560.252	0/1:21:9,12:9:324:12:428:-32.5372,0,-23.1842	0/1:219:106,113:106:3807:113:4028:-296.74,0,-276.9	0/0:188:188,0:188:6731:0:0:0,-56.5936,-605.864	0/0:350:350,0:350:12531:0:0:0,-105.36,-1127.5	0/1:128:63,65:63:2268:65:2332:-171.607,0,-165.85	0/0:88:88,0:88:3168:0:0:0,-26.4906,-285.339	0/1:110:50,60:50:1788:60:2140:-159.754,0,-128.089	0/0:147:146,1:146:5236:1:36:0,-40.6531,-467.778	0/1:43:20,23:20:716:23:828:-61.8998,0,-51.8234	0/1:70:32,38:32:1140:38:1364:-101.989,0,-81.8371	0/0:67:66,1:66:2368:1:26:0,-17.5692,-210.778	0/1:46:18,28:18:644:28:993:-75.8351,0,-44.4432	0/1:80:34,46:34:1216:46:1635:-123.35,0,-85.6642	0/1:62:22,40:22:792:40:1436:-110.873,0,-52.9418	0/0:171:171,0:171:6120:0:0:0,-51.4761,-550.898	0/0:104:104,0:104:3723:0:0:0,-31.3071,-335.271
chr03	27599260	.	G	T	225734	PASS	AB=0.47834;ABP=27.7506;AC=139;AF=0.739362;AN=188;AO=10176;CIGAR=1X;DP=13359;DPB=13359;DPRA=0;EPP=20271.9;EPPR=6660.87;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.9642;MQMR=59.8834;NS=94;NUMALT=1;ODDS=2.63407;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=364219;QR=113870;RO=3181;RPL=212;RPP=20296.9;RPPR=6686.48;RPR=9964;RUN=1;SAF=10173;SAP=22073.9;SAR=3;SRF=3178;SRP=6884.43;SRR=3;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:19,18:19:684:18:648:-47.5138,0,-50.7499	0/1:275:142,133:142:5080:133:4753:-345.115,0,-374.475	0/1:254:131,123:131:4701:123:4371:-317.102,0,-346.777	1/1:290:1,289:1:32:289:10335:-926.872,-84.0994,0	0/1:162:93,69:93:3336:69:2463:-173.157,0,-251.69	0/1:86:30,56:30:1063:56:2008:-155.105,0,-70.0922	0/1:244:97,147:97:3480:147:5245:-398.736,0,-239.941	1/1:269:0,269:0:0:269:9615:-865.302,-80.9771,0	1/1:135:0,135:0:0:135:4836:-435.393,-40.6391,0	0/1:185:103,82:103:3696:82:2921:-207.433,0,-277.148	0/1:66:36,30:36:1288:30:1076:-77.2849,0,-96.3446	0/1:88:50,38:50:1796:38:1359:-96.1192,0,-135.432	1/1:77:0,77:0:0:77:2764:-249.001,-23.1793,0	1/1:77:0,77:0:0:77:2772:-249.72,-23.1793,0	0/1:72:30,42:30:1076:42:1512:-114.7,0,-75.4721	0/1:60:26,34:26:936:34:1216:-91.6848,0,-66.4977	0/1:88:36,52:36:1273:52:1868:-141.907,0,-88.3799	1/1:67:0,67:0:0:67:2404:-216.616,-20.169,0	0/1:50:27,23:27:959:23:814:-58.5292,0,-71.5739	1/1:340:0,340:0:0:340:12201:-1097.92,-102.35,0	1/1:233:0,233:0:0:233:8350:-751.495,-70.14,0	0/1:147:96,51:96:3421:51:1836:-121.269,0,-263.786	0/1:120:56,64:56:2012:64:2287:-169.967,0,-145.225	0/1:237:113,124:113:4035:124:4456:-329.864,0,-291.992	1/1:97:0,97:0:0:97:3467:-312.237,-29.1999,0	0/1:536:319,217:319:11380:217:7793:-540.043,0,-862.587	1/1:269:0,269:0:0:269:9613:-864.967,-80.9771,0	0/1:45:20,25:20:712:25:900:-67.7747,0,-50.8603	1/1:443:1,442:1:36:442:15832:-1420.97,-129.758,0	1/1:151:0,151:0:0:151:5374:-483.781,-45.4555,0	1/1:163:0,162:0:0:162:5777:-519.793,-48.7669,0	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:200:1,199:1:36:199:7116:-637.938,-57.6473,0	0/1:239:117,122:117:4204:122:4388:-323.145,0,-306.591	0/1:72:39,33:39:1387:33:1175:-84.3828,0,-103.452	0/1:13:10,3:10:360:3:93:-4.76334,0,-28.8309	0/1:298:121,177:121:4316:177:6342:-481.163,0,-298.863	1/1:32:0,32:0:0:32:1143:-103.179,-9.63296,0	0/1:270:138,132:138:4936:132:4719:-343.591,0,-363.064	0/1:85:52,33:52:1868:33:1184:-81.2808,0,-142.724	1/1:65:0,65:0:0:65:2336:-210.499,-19.567,0	1/1:123:0,123:0:0:123:4395:-395.723,-37.0267,0	1/1:155:1,154:1:32:154:5500:-491.927,-43.4603,0	1/1:269:0,269:0:0:269:9636:-867.188,-80.9771,0	1/1:178:0,178:0:0:178:6375:-573.81,-53.5833,0	1/1:266:0,266:0:0:266:9552:-859.631,-80.074,0	1/1:205:0,205:0:0:205:7342:-660.827,-61.7112,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/1:201:100,101:100:3537:101:3628:-266.217,0,-258.031	0/1:35:16,19:16:568:19:684:-51.3543,0,-40.9158	0/1:23:14,9:14:500:9:324:-22.5822,0,-38.4125	0/1:256:136,120:136:4876:120:4303:-310.382,0,-361.927	1/1:76:0,76:0:0:76:2728:-245.763,-22.8783,0	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/1:29:11,18:11:383:18:632:-48.4769,0,-26.0734	0/1:144:82,62:82:2948:62:2227:-157.346,0,-222.205	0/1:97:50,47:50:1796:47:1684:-122.647,0,-132.722	0/1:12:6,6:6:216:6:212:-15.8124,0,-16.1777	1/1:253:0,253:0:0:253:9055:-814.893,-76.1606,0	1/1:270:6,264:6:216:264:9435:-829.169,-61.4876,0	1/1:122:0,122:0:0:122:4380:-394.372,-36.7257,0	1/1:186:0,186:0:0:186:6651:-598.657,-55.9916,0	1/1:254:1,253:1:36:253:9038:-809.8,-72.8633,0	0/1:149:98,51:98:3524:51:1832:-120.307,0,-272.512	1/1:20:1,19:1:36:19:680:-57.9309,-2.42233,0	1/1:126:0,126:0:0:126:4511:-406.157,-37.9298,0	1/1:95:0,95:0:0:95:3377:-304.146,-28.5979,0	0/1:25:16,9:16:576:9:324:-21.9801,0,-44.6316	1/1:103:0,103:0:0:103:3676:-331.036,-31.0061,0	0/1:89:40,49:40:1436:49:1760:-131.892,0,-102.746	1/1:330:1,328:1:36:328:11734:-1052.38,-95.7353,0	0/1:297:166,131:166:5945:131:4657:-329.876,0,-445.676	0/1:174:95,79:95:3407:79:2832:-202.739,0,-254.464	1/1:173:0,173:0:0:173:6206:-558.629,-52.0782,0	0/1:22:13,9:13:468:9:324:-22.8832,0,-35.837	0/1:218:111,107:111:3992:107:3847:-280.8,0,-293.799	1/1:190:0,190:0:0:190:6741:-606.763,-57.1957,0	1/1:355:0,355:0:0:355:12684:-1141.37,-106.866,0	0/1:131:66,65:66:2372:65:2333:-170.794,0,-174.302	1/1:90:0,90:0:0:90:3236:-291.456,-27.0927,0	0/1:107:59,48:59:2124:48:1716:-122.515,0,-159.218	1/1:148:1,147:1:36:147:5276:-471.376,-40.9542,0	0/1:43:23,20:23:828:20:720:-52.1845,0,-61.8998	0/1:71:38,33:38:1355:33:1188:-85.8555,0,-100.877	1/1:71:0,71:0:0:71:2546:-229.39,-21.3731,0	0/1:46:27,19:27:968:19:680:-47.6818,0,-73.59	0/1:83:47,36:47:1684:36:1287:-91.1473,0,-126.856	0/1:64:40,24:40:1440:24:864:-58.8166,0,-110.631	1/1:177:0,177:0:0:177:6343:-570.958,-53.2823,0	1/1:110:0,110:0:0:110:3942:-354.971,-33.1133,0
chr03	27599295	.	C	T	128470	PASS	AB=0.527666;ABP=72.6996;AC=49;AF=0.260638;AN=188;AO=5557;CIGAR=1X;DP=22894;DPB=22894;DPRA=1.01231;EPP=11914;EPPR=37132.4;GTI=0;LEN=1;MEANALT=1.08475;MQM=59.9079;MQMR=59.9855;NS=94;NUMALT=1;ODDS=21.2686;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=197892;QR=614028;RO=17322;RPL=3116;RPP=181.052;RPPR=660.407;RPR=2441;RUN=1;SAF=3098;SAP=162.567;SAR=2459;SRF=9750;SRP=597.675;SRR=7572;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:160:67,93:67:2400:93:3304:-249.305,0,-168.092	0/1:359:171,188:171:6020:188:6709:-495.755,0,-433.84	0/1:442:202,240:202:7197:240:8518:-633.427,0,-514.73	0/0:499:499,0:499:17668:0:0:0,-150.214,-1589.75	0/1:288:112,176:112:3978:176:6274:-478.059,0,-271.516	0/1:121:75,46:75:2674:46:1633:-110.834,0,-203.543	0/1:412:225,186:225:7933:186:6615:-471.332,0,-589.921	0/0:400:400,0:400:14209:0:0:0,-120.412,-1278.58	0/0:311:309,2:309:11044:2:63:0,-87.6372,-987.868	0/1:286:130,156:130:4609:156:5569:-415.207,0,-328.88	0/1:126:63,63:63:2229:63:2246:-164.468,0,-162.943	0/1:204:88,116:88:3143:116:4115:-309.122,0,-221.685	0/0:160:160,0:160:5707:0:0:0,-48.1648,-513.75	0/0:126:126,0:126:4489:0:0:0,-37.9298,-404.179	0/1:166:93,73:93:3304:73:2611:-185.265,0,-247.607	0/1:125:64,61:64:2254:61:2168:-157.758,0,-165.494	0/1:117:72,45:72:2575:45:1612:-110.15,0,-196.778	0/0:106:106,0:106:3773:0:0:0,-31.9092,-339.769	0/1:85:36,49:36:1273:49:1742:-131.475,0,-89.2834	0/0:534:532,0:532:18924:0:0:0,-160.148,-1702.37	0/0:506:505,0:505:17916:0:0:0,-152.02,-1611.7	0/1:283:94,189:94:3333:189:6719:-519.529,0,-214.997	0/1:274:133,141:133:4718:141:5018:-369.239,0,-342.298	0/1:368:201,167:201:7156:167:5961:-425.818,0,-533.318	0/0:196:196,0:196:6945:0:0:0,-59.0019,-625.118	0/1:763:314,449:314:11068:449:15980:-1208.15,0,-766.34	0/0:630:628,1:628:22395:1:36:0,-186.109,-2011.32	0/1:83:41,42:41:1447:42:1486:-109.048,0,-105.54	0/0:722:720,2:720:25569:2:72:0,-210.507,-2293.67	0/0:244:244,0:244:8646:0:0:0,-73.4513,-778.099	0/0:237:237,0:237:8341:0:0:0,-71.3441,-750.7	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:32:12,19:12:424:19:680:-51.9704,0,-28.9342	0/1:12:6,6:6:212:6:216:-16.1782,0,-15.8124	0/0:23:23,0:23:812:0:0:0,-6.92369,-73.4009	0/0:23:23,0:23:816:0:0:0,-6.92369,-73.7617	0/0:368:368,0:368:13077:0:0:0,-110.779,-1176.75	0/1:319:162,157:162:5704:157:5589:-407.102,0,-417.456	0/1:108:50,58:50:1762:58:2063:-153.427,0,-126.351	0/1:15:5,10:5:180:10:360:-28.2289,0,-12.0366	0/1:465:264,201:264:9302:201:7181:-506.277,0,-697.158	0/0:65:65,0:65:2279:0:0:0,-19.5669,-205.37	0/1:488:229,259:229:8112:259:9153:-676.781,0,-583.204	0/1:141:61,80:61:2162:80:2829:-212.4,0,-152.401	0/0:103:103,0:103:3602:0:0:0,-31.0061,-324.387	0/0:257:257,0:257:9102:0:0:0,-77.3647,-819.163	0/0:300:299,1:299:10531:1:36:0,-86.7107,-944.122	0/0:397:397,0:397:14062:0:0:0,-119.509,-1265.35	0/0:280:280,0:280:9947:0:0:0,-84.2884,-895.147	0/0:359:359,0:359:12724:0:0:0,-108.07,-1144.99	0/0:344:343,0:343:12168:0:0:0,-103.253,-1094.61	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/1:403:198,205:198:7042:205:7314:-536.997,0,-512.529	0/1:109:53,56:53:1873:56:2004:-147.81,0,-136.035	0/1:46:29,17:29:1023:17:608:-41.2046,0,-78.5344	0/1:412:195,217:195:6868:217:7720:-570.809,0,-494.172	0/0:174:173,0:173:6135:0:0:0,-52.0782,-551.892	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/1:43:26,17:26:910:17:608:-42.1077,0,-69.2698	0/1:262:126,136:126:4480:136:4839:-356.75,0,-324.503	0/1:185:88,97:88:3155:97:3420:-252.321,0,-228.483	0/1:20:10,10:10:351:10:356:-26.3605,0,-25.9061	0/0:344:344,0:344:12192:0:0:0,-103.554,-1097.06	0/0:471:458,11:458:16260:11:392:0,-105.922,-1426.79	0/0:192:192,0:192:6849:0:0:0,-57.7978,-616.481	0/0:271:271,0:271:9609:0:0:0,-81.5791,-864.77	0/0:389:388,1:388:13607:1:36:0,-113.502,-1220.84	0/1:323:113,210:113:4001:210:7508:-578.528,0,-263.049	0/0:61:59,2:59:2107:2:72:0,-11.5261,-183.062	0/0:223:223,0:223:7884:0:0:0,-67.1297,-709.595	0/0:129:129,0:129:4569:0:0:0,-38.8329,-411.376	0/1:56:27,29:27:964:29:1032:-76.3182,0,-70.2191	0/0:212:211,0:211:7469:0:0:0,-63.5173,-671.901	0/1:220:121,99:121:4309:99:3540:-252.583,0,-321.76	0/0:528:527,1:527:18691:1:36:0,-155.346,-1678.16	0/1:485:212,273:212:7534:273:9771:-733.261,0,-532.108	0/1:302:143,159:143:5067:159:5642:-416.992,0,-365.267	0/0:256:256,0:256:9025:0:0:0,-77.0637,-812.242	0/1:43:17,26:17:612:26:928:-70.894,0,-42.4691	0/1:382:188,194:188:6638:194:6941:-509.743,0,-482.511	0/0:296:295,0:295:10395:0:0:0,-88.8038,-935.125	0/0:603:602,0:602:21339:0:0:0,-181.22,-1919.53	0/1:188:90,98:90:3194:98:3489:-257.625,0,-231.088	0/0:139:139,0:139:4940:0:0:0,-41.8432,-444.751	0/1:168:75,93:75:2633:93:3315:-247.987,0,-186.642	0/0:273:270,3:270:9571:3:108:0,-72.106,-851.276	0/1:61:29,32:29:1040:32:1144:-84.9067,0,-75.5515	0/1:134:67,67:67:2388:67:2376:-173.761,0,-174.84	0/0:132:132,0:132:4673:0:0:0,-39.736,-420.732	0/1:86:41,45:41:1460:45:1612:-119.481,0,-105.807	0/1:153:74,79:74:2609:79:2811:-207.171,0,-188.998	0/1:140:47,93:47:1662:93:3316:-256.514,0,-107.722	0/0:268:265,2:265:9359:2:72:0,-73.8981,-835.448	0/0:226:225,0:225:8010:0:0:0,-67.7317,-720.713
chr03	27777875	.	G	A	24450.3	PASS	AB=0.257114;ABP=5152.73;AC=45;AF=0.239362;AN=188;AO=2629;CIGAR=1X;DP=19465;DPB=19465;DPRA=1.0877;EPP=5711.81;EPPR=36559.7;GTI=8;LEN=1;MEANALT=1;MQM=40.7482;MQMR=59.5514;NS=94;NUMALT=1;ODDS=4.08273;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94204;QR=600364;RO=16835;RPL=0;RPP=5711.81;RPPR=36559.7;RPR=2629;RUN=1;SAF=2629;SAP=5711.81;SAR=0;SRF=16835;SRP=36559.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:102:78,24:78:2743:24:860:-44.4415,0,-216.318	0/1:460:350,110:350:12542:110:3941:-199.326,0,-989.302	0/1:163:122,41:122:4353:41:1461:-77.8887,0,-342.863	0/0:381:381,0:381:13496:0:0:0,-114.692,-1214	0/1:126:91,35:91:3260:35:1252:-68.1635,0,-255.629	0/1:119:75,44:75:2677:44:1584:-102.322,0,-205.329	0/1:177:119,58:119:4219:58:2084:-127.859,0,-326.6	0/1:289:208,81:208:7385:81:2908:-164.033,0,-577.548	0/0:215:214,1:214:7528:1:36:0,-61.2408,-673.651	0/1:243:207,36:207:7371:36:1292:-39.1104,0,-590.227	0/1:328:261,67:261:9342:67:2404:-109.422,0,-741.835	0/1:126:76,50:76:2736:50:1800:-117.707,0,-208.542	0/0:202:202,0:202:7241:0:0:0,-60.8081,-651.598	0/0:144:144,0:144:5097:0:0:0,-43.3483,-458.755	0/1:149:107,42:107:3810:42:1508:-87.4612,0,-298.237	0/1:126:83,43:83:2946:43:1544:-94.7601,0,-227.423	0/1:326:249,77:249:8916:77:2768:-140.762,0,-703.354	0/0:182:182,0:182:6487:0:0:0,-54.7875,-583.187	0/1:148:120,28:120:4301:28:1004:-43.209,0,-342.702	0/0:240:240,0:240:8608:0:0:0,-72.2472,-773.936	0/0:314:314,0:314:11121:0:0:0,-94.5234,-1000.02	0/0:127:127,0:127:4534:0:0:0,-38.2308,-408.219	0/1:258:200,58:200:7120:58:2088:-103.789,0,-562.057	0/1:340:282,58:282:10087:58:2088:-76.9782,0,-804.278	0/0:125:124,1:124:4460:1:21:0,-35.5617,-399.281	0/1:815:645,170:645:23049:170:6067:-288.294,0,-1827.09	0/0:331:330,1:330:11825:1:36:0,-96.0478,-1060.28	0/1:110:92,18:92:3274:18:648:-23.1949,0,-261.724	0/0:311:311,0:311:11153:0:0:0,-93.6203,-1003.18	0/0:198:197,1:197:7038:1:36:0,-56.1232,-629.688	0/0:164:164,0:164:5832:0:0:0,-49.3689,-524.872	0/0:115:115,0:115:4106:0:0:0,-34.6184,-369.695	0/1:89:79,10:79:2825:10:360:-4.69189,0,-227.642	0/0:112:109,3:109:3882:3:108:0,-23.9694,-339.488	0/0:210:210,0:210:7449:0:0:0,-63.2163,-670.265	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.8446	0/0:243:243,0:243:8678:0:0:0,-73.1503,-780.957	0/1:213:146,67:146:5169:67:2393:-141.806,0,-401.136	0/1:252:222,30:222:7946:30:1065:-16.6465,0,-638.983	0/1:28:24,4:24:845:4:144:-4.25256,0,-67.929	0/1:386:307,79:307:10979:79:2836:-128.592,0,-871.179	0/0:138:138,0:138:4933:0:0:0,-41.5421,-444.092	0/1:312:224,88:224:7964:88:3126:-174.798,0,-622.717	0/1:183:120,63:120:4288:63:2260:-142.314,0,-330.859	0/0:114:114,0:114:4073:0:0:0,-34.3174,-366.535	0/0:163:163,0:163:5811:0:0:0,-49.0679,-523.046	0/0:137:136,0:136:4850:0:0:0,-40.9401,-435.499	0/0:206:206,0:206:7305:0:0:0,-62.0122,-656.692	0/0:143:143,0:143:5101:0:0:0,-43.0473,-459.219	0/0:386:385,1:385:13716:1:36:0,-112.695,-1230.57	0/0:163:163,0:163:5833:0:0:0,-49.0679,-525.065	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/1:298:242,56:242:8609:56:1997:-83.2044,0,-684.836	0/0:177:161,16:161:5727:16:572:0,-2.41772,-464.655	0/1:55:40,15:40:1436:15:540:-30.7163,0,-112.97	0/1:195:117,78:117:4161:78:2804:-180.967,0,-315.831	0/1:140:125,15:125:4420:15:540:-5.49251,0,-355.781	0/0:72:71,1:71:2552:1:36:0,-18.138,-226.38	0/0:79:75,4:75:2688:4:144:0,-10.7799,-229.152	0/1:200:123,77:123:4416:77:2741:-175.969,0,-336.225	0/1:360:282,78:282:10072:78:2800:-136.272,0,-797.792	0/0:124:119,5:119:4231:5:180:0,-21.2153,-364.84	0/0:348:348,0:348:12373:0:0:0,-104.758,-1113.1	0/0:197:197,0:197:7065:0:0:0,-59.3029,-635.869	0/0:110:109,1:109:3916:1:36:0,-29.6588,-349.009	0/0:199:199,0:199:7125:0:0:0,-59.905,-641.212	0/0:233:227,6:227:8099:6:216:0,-50.7899,-709.377	0/1:151:56,95:56:1967:95:3397:-251.961,0,-131.786	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.817	0/0:111:111,0:111:3942:0:0:0,-33.4143,-354.921	0/0:147:147,0:147:5216:0:0:0,-44.2514,-469.291	0/1:95:73,22:73:2597:22:788:-39.284,0,-205.348	0/0:180:180,0:180:6359:0:0:0,-54.1854,-572.359	0/1:132:73,59:73:2590:59:2109:-142.895,0,-193.603	0/0:452:452,0:452:16087:0:0:0,-136.066,-1446.95	0/1:490:391,99:391:13995:99:3552:-161.778,0,-1110.55	0/1:189:121,68:121:4326:68:2444:-155.077,0,-332.572	0/0:164:164,0:164:5889:0:0:0,-49.3689,-529.988	0/1:78:65,13:65:2317:13:468:-16.9161,0,-185.182	0/1:342:250,92:250:8919:92:3308:-180.395,0,-699.58	0/0:154:154,0:154:5487:0:0:0,-46.3586,-492.616	0/0:206:206,0:206:7343:0:0:0,-62.0122,-660.594	0/1:336:261,75:261:9285:75:2692:-131.757,0,-734.306	0/0:207:207,0:207:7361:0:0:0,-62.3132,-662.447	0/1:342:254,88:254:9022:88:3156:-170.785,0,-708.608	0/0:181:177,4:177:6330:4:129:0,-42.9727,-558.234	0/1:84:43,41:43:1529:41:1468:-101.262,0,-112.488	0/1:141:94,47:94:3357:47:1692:-101.413,0,-259.883	0/0:179:179,0:179:6383:0:0:0,-53.8844,-574.519	0/1:136:89,47:89:3192:47:1692:-104.002,0,-246.473	0/1:288:225,63:225:8076:63:2268:-109.042,0,-639.795	0/1:130:55,75:55:1961:75:2677:-194.934,0,-137.62	0/0:385:385,0:385:13665:0:0:0,-115.897,-1228.71	0/0:299:299,0:299:10707:0:0:0,-90.008,-963.106
chr03	27777888	.	A	G	24396.1	PASS	AB=0.259136;ABP=4981.21;AC=46;AF=0.244681;AN=188;AO=2609;CIGAR=1X;DP=18797;DPB=18797;DPRA=1.32892;EPP=5668.38;EPPR=35150.5;GTI=9;LEN=1;MEANALT=1.02857;MQM=40.8616;MQMR=59.5699;NS=94;NUMALT=1;ODDS=1.13632;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93061;QR=573814;RO=16186;RPL=0;RPP=5668.38;RPPR=35150.5;RPR=2609;RUN=1;SAF=2609;SAP=5668.38;SAR=0;SRF=16186;SRP=35150.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:104:81,23:81:2877:23:824:-40.7495,0,-227.031	0/1:449:342,107:342:12098:107:3812:-192.314,0,-952.696	0/1:161:123,38:123:4358:38:1360:-69.6867,0,-343.905	0/0:362:361,1:361:12794:1:36:0,-105.47,-1147.45	0/1:122:87,35:87:3085:35:1248:-69.294,0,-241.091	0/1:119:74,45:74:2640:45:1593:-102.455,0,-202.008	0/1:172:115,57:115:4060:57:2018:-124.325,0,-313.803	0/1:278:200,78:200:7100:78:2766:-155.749,0,-554.956	0/0:213:212,1:212:7532:1:36:0,-60.6387,-674.194	0/1:232:196,36:196:6970:36:1292:-42.4325,0,-557.489	0/1:316:249,67:249:8865:67:2391:-112.677,0,-702.681	0/1:124:76,48:76:2724:48:1719:-111.995,0,-207.959	0/0:188:186,1:186:6633:1:36:0,-53.0575,-593.331	0/0:142:142,0:142:5081:0:0:0,-42.7463,-457.21	0/1:143:101,42:101:3574:42:1499:-88.5076,0,-278.815	0/1:122:80,42:80:2844:42:1500:-92.2081,0,-219.45	0/1:309:231,78:231:8194:78:2800:-148.779,0,-643.353	0/0:173:171,2:171:6076:2:72:0,-45.3567,-539.717	0/1:139:111,28:111:3896:28:1008:-46.2184,0,-308.986	0/0:235:234,1:234:8258:1:36:0,-67.2393,-739.005	0/0:302:302,0:302:10646:0:0:0,-90.9111,-957.065	0/0:124:124,0:124:4436:0:0:0,-37.3277,-399.402	0/1:248:193,55:193:6831:55:1952:-95.8554,0,-540.088	0/1:325:266,59:266:9467:59:2120:-84.4283,0,-753.192	0/0:116:116,0:116:4098:0:0:0,-34.9195,-368.924	0/1:778:612,166:612:21637:166:5931:-288.198,0,-1711.27	0/0:316:315,1:315:11105:1:36:0,-91.5323,-995.497	0/1:105:87,18:87:3108:18:640:-24.1235,0,-248.3	0/0:302:301,1:301:10648:1:27:0,-88.228,-955.145	0/0:191:189,2:189:6715:2:72:0,-50.9083,-597.602	0/0:158:158,0:158:5566:0:0:0,-47.5627,-500.959	0/0:110:110,0:110:3882:0:0:0,-33.1133,-349.558	0/1:85:76,9:76:2724:9:320:-2.4731,0,-219.783	0/0:106:103,3:103:3661:3:108:0,-22.1632,-319.573	0/0:192:192,0:192:6792:0:0:0,-57.7978,-610.795	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.606	0/0:233:233,0:233:8333:0:0:0,-70.14,-749.924	0/1:205:138,67:138:4868:67:2385:-144.033,0,-375.717	0/1:247:216,31:216:7700:31:1108:-21.8771,0,-618.469	0/1:26:22,4:22:754:4:140:-4.56015,0,-60.3373	0/1:373:293,80:293:10379:80:2868:-134.515,0,-821.206	0/0:130:130,0:130:4579:0:0:0,-39.1339,-412.209	0/1:297:210,87:210:7439:87:3120:-179.012,0,-579.847	0/1:181:118,63:118:4199:63:2268:-143.536,0,-323.528	0/0:112:112,0:112:3965:0:0:0,-33.7154,-356.802	0/0:160:160,0:160:5637:0:0:0,-48.1648,-507.416	0/0:128:128,0:128:4483:0:0:0,-38.5318,-403.631	0/0:196:195,1:195:6877:1:36:0,-55.4062,-614.609	0/0:134:134,0:134:4739:0:0:0,-40.338,-426.53	0/0:376:375,1:375:13220:1:36:0,-109.685,-1185.98	0/0:160:160,0:160:5702:0:0:0,-48.1648,-513.283	0/0:55:55,0:55:1952:0:0:0,-16.5566,-175.956	0/1:289:232,57:232:8214:57:2030:-88.9478,0,-651.931	0/1:167:151,16:151:5359:16:572:-0.620231,0,-432.089	0/1:54:39,15:39:1376:15:536:-30.7162,0,-107.87	0/1:189:113,76:113:3994:76:2703:-175.499,0,-302.619	0/1:135:120,15:120:4221:15:536:-6.68571,0,-339.231	0/0:70:68,2:68:2397:2:72:0,-14.2979,-209.196	0/0:76:72,4:72:2580:4:144:0,-9.87681,-219.429	0/1:195:119,76:119:4234:76:2724:-175.558,0,-321.356	0/1:354:277,77:277:9904:77:2734:-132.64,0,-784.577	0/0:123:118,5:118:4158:5:180:0,-20.9143,-358.28	0/0:333:331,2:331:11705:2:72:0,-93.6312,-1045.91	0/0:199:198,1:198:7028:1:36:0,-56.3093,-628.954	0/0:104:103,1:103:3631:1:36:0,-27.8526,-323.502	0/0:187:187,0:187:6600:0:0:0,-56.2926,-594.015	0/0:221:214,7:214:7542:7:252:0,-43.9403,-656.135	0/1:150:55,95:55:1892:95:3400:-252.319,0,-125.323	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.986	0/0:109:109,0:109:3870:0:0:0,-32.8123,-348.473	0/0:141:140,1:140:4946:1:36:0,-38.8507,-441.468	0/1:91:69,22:69:2429:22:767:-39.1071,0,-191.454	0/0:175:175,0:175:6233:0:0:0,-52.6802,-560.992	0/1:128:71,57:71:2536:57:2018:-136.807,0,-189.95	0/0:446:444,2:444:15754:2:72:0,-127.564,-1410.1	0/1:478:380,97:380:13460:97:3476:-158.74,0,-1065.56	0/1:183:116,67:116:4099:67:2404:-153.65,0,-313.959	0/0:159:158,1:158:5552:1:36:0,-44.3831,-496.258	0/1:75:62,13:62:2159:13:468:-17.8192,0,-171.939	0/1:331:240,91:240:8561:91:3245:-178.802,0,-670.688	0/0:152:149,3:149:5230:3:108:0,-36.0106,-459.862	0/0:201:200,1:200:7103:1:36:0,-56.9113,-635.498	0/1:320:247,73:247:8794:73:2597:-129.695,0,-695.069	0/0:203:203,0:203:7248:0:0:0,-61.1091,-652.315	0/1:325:242,83:242:8621:83:2928:-157.277,0,-677.664	0/0:180:176,4:176:6296:4:144:0,-41.3906,-553.898	0/1:79:39,40:39:1400:40:1436:-99.9767,0,-102.508	0/1:140:94,46:94:3355:46:1627:-97.0495,0,-260.006	0/0:179:179,0:179:6396:0:0:0,-53.8844,-575.688	0/1:130:84,46:84:3004:46:1623:-100.914,0,-231.371	0/1:280:218,62:218:7796:62:2216:-107.751,0,-616.912	0/1:126:53,73:53:1896:73:2584:-188.29,0,-132.789	0/0:370:370,0:370:13041:0:0:0,-111.381,-1170.96	0/0:292:292,0:292:10387:0:0:0,-87.9008,-934.512
chr03	27777920	.	C	T	37894.9	PASS	AB=0.192581;ABP=24124.3;AC=63;AF=0.335106;AN=188;AO=6480;CIGAR=1X;DP=42339;DPB=42339;DPRA=6.58719;EPP=14074.2;EPPR=77687.5;GTI=27;LEN=1;MEANALT=1.06452;MQM=59.8818;MQMR=58.3926;NS=94;NUMALT=1;ODDS=3.9372;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=230417;QR=1276156;RO=35851;RPL=15;RPP=13944.2;RPPR=392.243;RPR=6465;RUN=1;SAF=15;SAP=13944.2;SAR=6465;SRF=19212;SRP=403.999;SRR=16639;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:368:345,23:345:12255:23:816:0,-37.0532,-1025.94	0/0:737:689,48:689:24542:48:1716:0,-67.1335,-2036.75	0/1:484:431,53:431:15345:53:1880:-23.7796,0,-1230.32	0/1:1178:964,214:964:34398:214:7629:-331.936,0,-2739.77	0/0:253:239,14:239:8513:14:504:0,-30.4625,-713.468	0/1:180:163,17:163:5803:17:600:-0.143798,0,-463.671	0/1:481:409,72:409:14540:72:2560:-85.8053,0,-1157.8	0/1:664:572,92:572:20365:92:3281:-95.6258,0,-1621.81	0/1:655:532,123:532:18970:123:4332:-192.459,0,-1509.26	0/1:503:454,49:454:16128:49:1732:-4.47669,0,-1295.86	0/0:459:435,24:435:15475:24:852:0,-61.1724,-1308.09	0/1:368:317,51:317:11267:51:1820:-53.3022,0,-896.726	0/1:500:413,87:413:14721:87:3095:-128.157,0,-1174.09	0/1:265:201,63:201:7147:63:2227:-120.86,0,-563.278	0/1:311:275,36:275:9761:36:1288:-22.6033,0,-781.418	0/1:293:248,45:248:8801:45:1604:-56.4484,0,-697.585	0/0:407:396,11:396:14072:11:384:0,-87.6245,-1220.93	0/1:291:246,45:246:8713:45:1592:-55.8645,0,-696.055	0/0:284:266,18:266:9480:18:644:0,-27.2019,-792.106	0/1:618:517,101:517:18427:101:3593:-137.529,0,-1471.23	0/1:1111:914,197:914:32513:197:7010:-296.515,0,-2590.17	0/1:332:288,44:288:10206:44:1560:-40.7313,0,-818.497	0/0:639:599,40:599:21335:40:1428:0,-63.5548,-1784.04	0/0:612:585,27:585:20872:27:946:0,-98.7775,-1781.98	0/1:423:329,94:329:11755:94:3347:-174.109,0,-930.379	0/0:1652:1537,114:1537:54829:114:4053:0,-132.472,-4554.57	0/1:1039:788,251:788:28037:251:8952:-492.812,0,-2209.35	0/0:225:206,19:206:7271:19:668:0,-7.28608,-591.955	0/1:896:664,232:664:23680:232:8242:-471.866,0,-1860.63	0/1:440:331,108:331:11795:108:3828:-212.207,0,-927.712	0/1:365:297,68:297:10581:68:2432:-109.215,0,-842.216	0/0:146:141,5:141:5025:5:165:0,-28.7817,-437.203	0/0:163:158,5:158:5650:5:180:0,-32.5158,-490.494	0/0:122:119,3:119:4212:3:108:0,-26.6505,-368.488	0/0:238:226,12:226:8020:12:428:0,-32.7863,-682.782	0/1:49:36,13:36:1296:13:464:-27.347,0,-102.124	0/1:655:446,209:446:15849:209:7418:-470.496,0,-1228.88	0/0:370:341,29:341:12113:29:1012:0,-19.9905,-989.458	0/0:519:471,48:471:16719:48:1724:0,-0.793116,-1345.05	0/0:33:32,1:32:1139:1:36:0,-6.33616,-98.8218	0/0:844:776,68:776:27672:68:2436:0,-34.6189,-2257.94	0/1:222:196,26:196:6950:26:932:-17.3702,0,-558.659	0/1:711:615,96:615:21841:96:3390:-91.2855,0,-1737.06	0/0:308:280,25:280:9988:25:896:0,-11.2135,-811.927	0/1:230:177,52:177:6305:52:1864:-98.882,0,-498.341	0/1:485:397,88:397:14198:88:3120:-135.026,0,-1131.43	0/1:385:258,127:258:9180:127:4524:-291.388,0,-709.479	0/1:667:471,196:471:16802:196:7008:-429.997,0,-1310.98	0/1:352:268,84:268:9564:84:2983:-162.735,0,-753.946	0/1:803:678,125:678:24190:125:4455:-159.395,0,-1934.5	0/1:371:261,110:261:9333:110:3891:-238.692,0,-728.235	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/1:636:569,67:569:20260:67:2378:-22.8237,0,-1624.2	0/1:423:374,49:374:13328:49:1756:-30.9867,0,-1071.03	0/0:69:65,4:65:2328:4:136:0,-8.19553,-195.537	0/1:501:423,78:423:15085:78:2788:-100.345,0,-1193.89	0/0:333:316,17:316:11220:17:612:0,-44.8296,-952.545	0/1:95:86,9:86:3056:9:324:-0.9076,0,-246.592	0/0:112:110,2:110:3928:2:72:0,-26.8786,-346.611	0/1:377:334,43:334:11917:43:1521:-23.6937,0,-947.937	0/0:633:584,49:584:20793:49:1732:0,-34.3886,-1707.4	0/0:146:145,1:145:5184:1:36:0,-40.3521,-462.657	0/1:751:602,149:602:21465:149:5331:-253.77,0,-1704.94	0/1:540:394,146:394:14044:146:5183:-304.053,0,-1101.08	0/1:280:182,98:182:6497:98:3512:-231.997,0,-500.228	0/1:445:356,89:356:12687:89:3180:-152.466,0,-1007.65	0/1:504:409,95:409:14575:95:3387:-153.327,0,-1159.21	0/1:465:408,57:408:14506:57:2029:-42.9026,0,-1156.78	0/1:119:87,32:87:3073:32:1137:-66.7799,0,-240.965	0/1:256:178,78:178:6319:78:2762:-171.675,0,-491.715	0/1:232:181,50:181:6444:50:1762:-88.9648,0,-509.81	0/1:153:138,15:138:4864:15:536:-2.51723,0,-389.072	0/1:609:465,144:465:16560:144:5130:-278.507,0,-1306.7	0/1:336:271,65:271:9625:65:2315:-107.442,0,-758.377	0/1:1140:927,213:927:32973:213:7559:-337.177,0,-2622.34	0/0:879:817,62:817:29160:62:2201:0,-66.2502,-2414.46	0/1:404:330,74:330:11693:74:2644:-116.591,0,-922.91	0/1:333:240,93:240:8569:93:3276:-194.711,0,-670.941	0/1:117:106,11:106:3781:11:392:-0.399548,0,-303.948	0/0:656:611,45:611:21764:45:1596:0,-53.5454,-1799.86	0/1:394:253,141:253:8933:141:4988:-330.435,0,-683.948	0/1:596:453,143:453:16132:143:5095:-279.196,0,-1271.88	0/0:527:502,25:502:17855:25:884:0,-78.7644,-1518.44	0/1:459:376,83:376:13312:83:2963:-128.73,0,-1059.69	0/0:481:452,29:452:16067:29:1028:0,-51.9624,-1342.38	0/1:435:318,117:318:11297:117:4163:-243.907,0,-885.114	0/1:140:126,14:126:4466:14:491:-2.37692,0,-354.492	0/1:303:269,34:269:9498:34:1220:-18.8947,0,-756.649	0/1:410:343,67:343:12188:67:2333:-86.8073,0,-973.31	0/1:205:179,26:179:6362:26:932:-22.4877,0,-503.908	0/0:413:378,35:378:13463:35:1233:0,-13.0627,-1091.85	0/0:257:239,18:239:8504:18:636:0,-19.7967,-700.935	0/1:737:641,96:641:22774:96:3420:-86.1563,0,-1824.74	0/1:663:548,115:548:19492:115:4095:-169.108,0,-1553.84
chr03	27777938	.	C	T	132791	PASS	AB=0.289335;ABP=11348.8;AC=93;AF=0.494681;AN=188;AO=8517;CIGAR=1X;DP=29457;DPB=29457;DPRA=0;EPP=9319.67;EPPR=10588.5;GTI=17;LEN=1;MEANALT=1.12766;MQM=59.822;MQMR=59.8322;NS=94;NUMALT=1;ODDS=1.76559;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304459;QR=745541;RO=20926;RPL=8442;RPP=17851.7;RPPR=16227.3;RPR=75;RUN=1;SAF=1161;SAP=9787.77;SAR=7356;SRF=1204;SRP=35587.1;SRR=19722;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:291:192,99:192:6854:99:3552:-232.258,0,-529.295	0/1:341:240,101:240:8582:101:3602:-221.7,0,-669.726	0/1:357:263,94:263:9378:94:3369:-195.929,0,-736.516	0/1:892:589,303:589:21007:303:10859:-708.461,0,-1621.58	0/1:133:95,38:95:3396:38:1353:-81.9886,0,-265.818	0/1:68:56,12:56:1999:12:432:-18.7512,0,-159.713	0/1:350:264,86:264:9431:86:3072:-171.349,0,-743.379	0/1:434:354,80:354:12627:80:2867:-127.617,0,-1005.61	0/1:562:390,172:390:13927:172:6127:-382.313,0,-1083.6	0/1:319:243,76:243:8665:76:2724:-149.374,0,-683.532	0/1:171:118,53:118:4215:53:1900:-119.802,0,-328.053	0/1:302:235,67:235:8390:67:2374:-123.002,0,-664.193	0/1:387:289,98:289:10286:98:3511:-199.701,0,-809.167	0/1:143:111,31:111:3955:31:1104:-56.5647,0,-313.036	0/1:196:153,43:153:5428:43:1544:-80.2512,0,-429.651	0/1:199:156,43:156:5552:43:1539:-78.8905,0,-439.898	0/1:103:64,39:64:2304:39:1404:-95.6532,0,-176.614	0/1:149:111,38:111:3952:38:1368:-78.5674,0,-311.018	0/1:169:123,46:123:4378:46:1656:-98.4543,0,-343.318	0/1:423:278,145:278:9912:145:5204:-341.161,0,-764.559	0/1:995:661,334:661:23579:334:11912:-772.402,0,-1821.96	0/1:345:210,135:210:7443:135:4812:-329.32,0,-566.05	0/1:451:307,142:307:10930:142:5072:-321.103,0,-848.067	0/1:316:215,101:215:7671:101:3582:-227.401,0,-595.263	0/1:355:230,125:230:8197:125:4476:-296.142,0,-630.878	0/1:1675:1077,597:1077:38133:597:21275:-1409.57,0,-2918.13	0/1:865:623,241:623:22246:241:8624:-515.687,0,-1741.11	0/1:157:121,36:121:4301:36:1292:-69.3221,0,-340.007	0/1:950:617,332:617:21907:332:11846:-779.809,0,-1684.88	0/1:251:185,66:185:6591:66:2365:-137.231,0,-517.713	0/1:220:154,66:154:5468:66:2360:-146.43,0,-425.977	0/1:33:25,8:25:892:8:288:-16.3334,0,-70.6657	0/1:95:70,25:70:2512:25:900:-52.7232,0,-197.734	0/1:14:9,5:9:324:5:176:-11.9682,0,-25.2914	0/1:39:26,13:26:927:13:468:-30.7195,0,-72.0072	0/0:24:23,1:23:820:1:36:0,-3.62644,-70.5136	0/1:748:528,218:528:18672:218:7761:-473.562,0,-1455.15	0/1:190:133,57:133:4752:57:2036:-126.317,0,-370.643	0/1:326:243,83:243:8688:83:2984:-170.62,0,-683.738	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42806	0/1:521:359,162:359:12777:162:5786:-363.528,0,-992.924	0/1:105:72,33:72:2548:33:1188:-75.6204,0,-197.961	0/1:444:353,91:353:12606:91:3247:-158.736,0,-1000.09	0/1:157:118,39:118:4214:39:1385:-77.6602,0,-332.176	0/1:153:124,28:124:4427:28:1000:-44.1991,0,-352.486	0/1:563:356,206:356:12692:206:7364:-492.58,0,-972.569	0/1:276:213,63:213:7600:63:2260:-120.578,0,-600.91	0/1:500:371,128:371:13231:128:4542:-258.327,0,-1040.03	0/1:239:164,75:164:5868:75:2679:-169.301,0,-456.285	0/1:476:330,146:330:11800:146:5228:-327.365,0,-918.57	0/1:387:262,125:262:9251:125:4456:-284.705,0,-716.029	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/1:402:278,124:278:9955:124:4448:-279.468,0,-774.874	0/1:431:287,144:287:10158:144:5148:-333.702,0,-783.838	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.8309	0/1:342:280,61:280:9984:61:2194:-94.6695,0,-795.474	0/1:230:174,56:174:6220:56:1985:-109.686,0,-490.63	0/1:88:53,35:53:1888:35:1232:-84.6772,0,-143.521	0/1:105:65,40:65:2311:40:1436:-97.9195,0,-176.521	0/1:206:164,42:164:5867:42:1501:-73.1004,0,-466.129	0/1:333:248,85:248:8876:85:3044:-173.947,0,-698.579	0/1:23:9,14:9:324:14:504:-38.7744,0,-22.5822	0/1:779:485,294:485:17182:294:10476:-708.074,0,-1311.45	0/1:388:287,101:287:10276:101:3624:-209.52,0,-807.921	0/1:190:149,41:149:5325:41:1468:-75.2204,0,-422.187	0/1:288:207,81:207:7363:81:2912:-175.618,0,-576.025	0/1:316:209,106:209:7480:106:3789:-246.023,0,-578.059	0/1:352:306,46:306:10938:46:1648:-42.646,0,-878.356	0/1:73:59,14:59:2085:14:504:-23.7229,0,-165.914	0/1:177:140,37:140:5012:37:1324:-66.1798,0,-397.56	0/1:235:142,93:142:4985:93:3320:-228.131,0,-378.059	0/1:75:53,22:53:1908:22:788:-48.6675,0,-149.42	0/1:484:351,133:351:12534:133:4756:-282.498,0,-982.182	0/1:235:200,35:200:7172:35:1256:-42.6032,0,-574.783	0/1:780:526,254:526:18664:254:9053:-579.193,0,-1444.55	0/1:450:299,151:299:10673:151:5422:-352.644,0,-825.018	0/1:231:186,45:186:6634:45:1616:-76.1839,0,-527.603	0/1:194:155,39:155:5547:39:1388:-66.8158,0,-440.954	0/1:48:37,11:37:1328:11:396:-21.5333,0,-105.373	0/1:374:265,109:265:9474:109:3912:-239.558,0,-739.955	0/1:262:209,53:209:7464:53:1904:-92.7572,0,-592.929	0/1:473:341,132:341:12156:132:4724:-282.89,0,-951.5	0/1:270:197,73:197:7019:73:2619:-154.665,0,-550.493	0/1:310:216,94:216:7668:94:3360:-209.297,0,-596.839	0/1:205:163,42:163:5814:42:1504:-73.5729,0,-461.663	0/1:315:249,66:249:8859:66:2372:-118.871,0,-702.476	0/1:74:63,11:63:2243:11:396:-13.7065,0,-179.857	0/1:200:149,50:149:5319:50:1800:-102.009,0,-418.58	0/1:289:207,82:207:7384:82:2925:-176.486,0,-577.609	0/1:93:74,19:74:2619:19:680:-33.5334,0,-207.904	0/1:158:121,37:121:4331:37:1332:-72.6196,0,-342.386	0/1:151:126,25:126:4502:25:896:-35.5048,0,-359.892	0/1:423:289,134:289:10268:134:4782:-303.153,0,-796.717	0/1:514:387,127:387:13779:127:4556:-255.44,0,-1085.16
chr03	27777993	.	G	A	247137	PASS	AB=0.315736;ABP=12097.2;AC=94;AF=0.5;AN=188;AO=12948;CIGAR=1X;DP=41009;DPB=41009;DPRA=0;EPP=5856.74;EPPR=1196.53;GTI=2;LEN=1;MEANALT=2.09574;MQM=53.0099;MQMR=59.8924;NS=94;NUMALT=1;ODDS=21.3551;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=461916;QR=823429;RO=23110;RPL=38;RPP=27790.1;RPPR=49778.3;RPR=12910;RUN=1;SAF=9466;SAP=6008.31;SAR=3482;SRF=13384;SRP=1260.32;SRR=9726;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:355:224,110:224:7988:110:3924:-250.633,0,-617.909	0/1:962:487,347:487:17384:347:12360:-854.913,0,-1312.65	0/1:478:294,134:294:10492:134:4763:-297.334,0,-814.749	0/1:883:466,303:466:16585:303:10769:-728.295,0,-1260.47	0/1:251:154,81:154:5462:81:2885:-187.534,0,-420.54	0/1:169:87,58:87:3060:58:2075:-142.106,0,-231.617	0/1:407:236,138:236:8420:138:4939:-329.022,0,-644.295	0/1:687:393,203:393:14047:203:7213:-466.455,0,-1083.12	0/1:732:419,249:419:14920:249:8810:-587.131,0,-1141.07	0/1:602:325,222:325:11540:222:7906:-538.844,0,-871.986	0/1:469:241,119:241:8556:119:4264:-271.353,0,-661.309	0/1:498:337,119:337:11936:119:4264:-243.986,0,-936.372	0/1:664:393,206:393:13964:206:7347:-476.105,0,-1075.68	0/1:305:174,78:174:6207:78:2788:-174.037,0,-482.501	0/1:384:222,116:222:7917:116:4156:-268.964,0,-610.414	0/1:332:222,75:222:7928:75:2683:-151.026,0,-623.755	0/1:592:291,198:291:10393:198:7065:-484.323,0,-787.658	0/1:466:242,154:242:8626:154:5497:-373.165,0,-656.771	0/1:288:147,110:147:5272:110:3928:-272.625,0,-396.852	0/1:569:357,173:357:12733:173:6162:-390.911,0,-985.845	0/1:868:505,274:505:17965:274:9762:-638.623,0,-1379.85	0/1:308:176,97:176:6272:97:3475:-229.677,0,-482.032	0/1:496:258,177:258:9156:177:6300:-432.763,0,-692.661	0/1:690:342,292:342:12169:292:10419:-741.525,0,-903.809	0/1:443:265,143:265:9467:143:5089:-332.938,0,-728.809	0/1:1317:726,438:726:25797:438:15636:-1051.34,0,-1969.74	0/1:1210:652,431:652:23250:431:15387:-1051.66,0,-1765.5	0/1:354:188,119:188:6706:119:4268:-290.088,0,-510.837	0/1:607:366,181:366:13077:181:6468:-415.047,0,-1011.69	0/1:264:138,88:138:4931:88:3136:-212.763,0,-375.552	0/1:363:213,102:213:7558:102:3638:-229.855,0,-585.078	0/1:30:17,12:17:603:12:424:-29.3066,0,-45.5101	0/1:62:32,20:32:1137:20:716:-48.6122,0,-86.6247	0/1:40:16,16:16:572:16:576:-42.0235,0,-41.8215	0/1:42:22,13:22:777:13:464:-31.0466,0,-59.3648	0/1:30:12,9:12:408:9:320:-22.2994,0,-30.3712	0/1:860:569,201:569:20262:201:7211:-414.497,0,-1590.78	0/1:294:175,88:175:6267:88:3136:-202.018,0,-484.389	0/1:463:233,151:233:8306:151:5369:-364.14,0,-631.592	0/1:10:6,2:6:208:2:72:-4.05775,0,-16.2934	0/1:714:376,255:376:13442:255:9105:-625.687,0,-1019.24	0/1:263:126,103:126:4485:103:3655:-257.308,0,-334.528	0/1:517:327,158:327:11662:158:5648:-360.007,0,-902.423	0/1:362:217,103:217:7753:103:3696:-234.068,0,-601.099	0/1:297:183,81:183:6522:81:2865:-177.26,0,-507.234	0/1:430:257,136:257:9167:136:4852:-317.086,0,-706.295	0/1:416:263,116:263:9387:116:4122:-255.092,0,-730.342	0/1:473:270,141:270:9644:141:4979:-321.24,0,-743.819	0/1:322:197,91:197:7003:91:3238:-201.767,0,-543.273	0/1:717:345,258:345:12344:258:9193:-641.29,0,-928.91	0/1:333:203,105:203:7216:105:3756:-244.64,0,-556.42	0/1:37:22,12:22:769:12:424:-27.5172,0,-58.935	0/1:954:526,282:526:18776:282:10059:-656.16,0,-1445.17	0/1:193:98,62:98:3488:62:2224:-151.67,0,-265.6	0/1:23:16,5:16:576:5:180:-9.87061,0,-45.4935	0/1:361:211,95:211:7433:95:3404:-212.507,0,-576.548	0/1:249:125,86:125:4414:86:3056:-210.072,0,-333.548	0/1:11:7,3:7:244:3:108:-6.68831,0,-18.9307	0/1:22:15,7:15:532:7:248:-16.0182,0,-41.5904	0/1:267:148,80:148:5245:80:2864:-186.653,0,-403.182	0/1:720:384,210:384:13703:210:7497:-488.082,0,-1053.83	0/1:29:14,13:14:500:13:464:-33.4357,0,-36.8489	0/1:661:336,226:336:12020:226:8104:-558.584,0,-911.338	0/1:547:352,131:352:12502:131:4685:-273.47,0,-979.263	0/1:226:122,72:122:4355:72:2564:-171.587,0,-333.367	0/1:311:154,106:154:5516:106:3769:-257.921,0,-417.93	0/1:498:291,148:291:10319:148:5288:-340.451,0,-795.435	0/1:214:161,44:161:5715:44:1584:-80.0678,0,-452.393	0/1:160:85,50:85:3017:50:1773:-118.013,0,-230.768	0/1:249:141,87:141:5039:87:3108:-209.856,0,-384.667	0/1:385:231,107:231:8248:107:3808:-240.051,0,-640.205	0/1:98:55,35:55:1950:35:1248:-83.7962,0,-148.309	0/1:360:190,113:190:6781:113:4034:-269.15,0,-518.795	0/1:285:163,101:163:5823:101:3589:-241.904,0,-444.33	0/1:923:469,325:469:16737:325:11621:-802.417,0,-1266.43	0/1:727:385,227:385:13699:227:8121:-541.435,0,-1047.39	0/1:384:222,123:222:7893:123:4380:-287.668,0,-606.157	0/1:498:253,174:253:9030:174:6224:-428.775,0,-683.764	0/1:52:28,19:28:981:19:680:-46.9135,0,-74.0943	0/1:761:393,255:393:14006:255:9107:-620.467,0,-1064.83	0/1:409:231,141:231:8274:141:4987:-333.874,0,-632.279	0/1:593:365,174:365:12979:174:6215:-393.895,0,-1005.32	0/1:685:356,240:356:12698:240:8567:-583.038,0,-962.832	0/1:567:311,173:311:11044:173:6174:-405.163,0,-847.792	0/1:730:420,229:420:15039:229:8157:-529.832,0,-1156.74	0/1:643:397,171:397:14159:171:6140:-374.508,0,-1102.46	0/1:159:95,44:95:3388:44:1572:-98.1749,0,-262.912	0/1:382:242,107:242:8663:107:3802:-234.748,0,-674.228	0/1:585:313,199:313:11125:199:7084:-479.619,0,-846.533	0/1:208:125,56:125:4451:56:1982:-123.139,0,-345.907	0/1:341:192,86:192:6836:86:3071:-191.783,0,-531.252	0/1:273:199,58:199:7092:58:2084:-108.624,0,-559.168	0/1:577:305,199:305:10909:199:7112:-483.105,0,-829.605	0/1:964:576,279:576:20518:279:9981:-634.572,0,-1588.33
chr03	27778025	.	G	T	69609.4	PASS	AB=0.197399;ABP=23911.9;AC=80;AF=0.425532;AN=188;AO=6377;CIGAR=1X;DP=35841;DPB=35841;DPRA=0;EPP=409.808;EPPR=5120.77;GTI=27;LEN=1;MEANALT=1.01064;MQM=59.8444;MQMR=56.9218;NS=94;NUMALT=1;ODDS=0.222463;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=225080;QR=1045382;RO=29463;RPL=6334;RPP=13479.5;RPPR=62727.8;RPR=43;RUN=1;SAF=3692;SAP=348.311;SAR=2685;SRF=18753;SRP=4770.76;SRR=10710;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:336:318,18:318:11280:18:640:0,-43.2344,-955.305	0/0:815:755,60:755:26808:60:2122:0,-54.1381,-2214.68	0/1:429:358,71:358:12727:71:2487:-94.9381,0,-1013.37	0/1:755:626,129:626:22225:129:4535:-180.188,0,-1765.21	0/1:232:195,37:195:6902:37:1290:-46.5509,0,-550.429	0/0:144:135,9:135:4777:9:320:0,-14.206,-400.289	0/1:367:315,52:315:11174:52:1860:-57.2016,0,-892.468	0/1:585:484,101:484:17133:101:3581:-145.863,0,-1362.17	0/1:670:564,106:564:19922:106:3744:-135.469,0,-1586.47	0/1:541:488,53:488:17329:53:1884:-6.98141,0,-1389.63	0/1:356:319,37:319:11347:37:1324:-12.2954,0,-910.58	0/1:454:377,77:377:13336:77:2706:-107.057,0,-1061.22	0/1:614:483,131:483:17186:131:4630:-232.017,0,-1357.62	0/1:253:171,82:171:6063:82:2932:-187.923,0,-468.566	0/1:335:284,51:284:10139:51:1763:-58.1049,0,-809.295	0/1:289:232,57:232:8200:57:2028:-95.7951,0,-650.07	0/0:490:456,34:456:16133:34:1212:0,-38.1184,-1338.37	0/1:396:320,76:320:11340:76:2657:-120.169,0,-898.558	0/0:260:244,15:244:8680:15:532:0,-30.0992,-729.502	0/1:523:375,148:375:13351:148:5243:-314.571,0,-1040.55	0/1:773:610,163:610:21633:163:5711:-281.277,0,-1709.76	0/1:275:221,54:221:7880:54:1893:-87.8614,0,-626.04	0/1:449:399,50:399:14103:50:1771:-24.5063,0,-1130.77	0/1:635:555,80:555:19709:80:2844:-65.0256,0,-1576.99	0/1:414:340,74:340:12076:74:2615:-110.972,0,-959.74	0/0:1152:1050,102:1050:37289:102:3613:0,-21.4186,-3025.43	0/1:1071:882,189:882:31337:189:6677:-278.384,0,-2491.49	0/1:306:276,30:276:9828:30:1064:-3.95188,0,-791.112	0/1:539:388,151:388:13768:151:5297:-314.585,0,-1075.22	0/1:225:171,54:171:6041:54:1936:-106.785,0,-474.548	0/1:314:211,103:211:7530:103:3630:-232.38,0,-581.064	0/1:29:26,3:26:932:3:95:-0.134343,0,-75.3624	0/1:51:45,6:45:1584:6:201:-3.06451,0,-127.357	0/0:33:32,1:32:1122:1:36:0,-6.33571,-97.5505	0/1:37:31,6:31:1094:6:212:-8.28669,0,-87.4726	0/1:20:13,7:13:468:7:248:-16.6436,0,-36.1713	0/1:779:519,260:519:18392:260:9201:-593.514,0,-1418.15	0/1:263:235,28:235:8302:28:989:-10.1511,0,-666.996	0/0:382:355,27:355:12601:27:943:0,-29.8148,-1047	0/1:8:6,2:6:208:2:68:-4.04947,0,-16.6432	0/0:628:575,53:575:20444:53:1869:0,-20.5603,-1667.4	0/1:234:191,43:191:6787:43:1523:-66.9213,0,-537.842	0/1:475:410,65:410:14506:65:2324:-66.4203,0,-1160.25	0/1:320:276,44:276:9726:44:1572:-45.442,0,-777.465	0/1:261:175,86:175:6150:86:3055:-196.592,0,-474.195	0/1:396:336,60:336:11943:60:2109:-70.867,0,-954.437	0/1:375:270,105:270:9595:105:3693:-219.643,0,-749.575	0/1:412:290,122:290:10260:122:4281:-261.445,0,-796.526	0/1:282:187,95:187:6652:95:3319:-214.04,0,-511.134	0/1:606:520,86:520:18374:86:3072:-94.285,0,-1467.19	0/1:313:230,83:230:8206:83:2913:-168.184,0,-643.579	0/1:34:22,12:22:788:12:428:-28.6238,0,-60.5999	0/0:800:728,72:728:26038:72:2543:0,-11.7337,-2108.55	0/1:160:138,22:138:4897:22:772:-21.6365,0,-392.493	0/1:23:18,5:18:635:5:180:-9.62837,0,-50.5533	0/1:302:241,61:241:8540:61:2106:-98.8748,0,-676.211	0/1:203:179,24:179:6381:24:844:-15.1698,0,-512.071	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5416	0/1:22:19,3:19:653:3:108:-3.45251,0,-52.4484	0/1:230:194,36:194:6880:36:1265:-44.9137,0,-547.516	0/1:595:532,63:532:18877:63:2244:-23.111,0,-1513.22	0/0:26:25,1:25:896:1:36:0,-4.2285,-77.188	0/1:547:438,109:438:15606:109:3813:-178.699,0,-1238.43	0/1:481:342,139:342:12167:139:4931:-299.148,0,-947.975	0/1:191:138,53:138:4910:53:1880:-111.976,0,-383.524	0/1:246:202,44:202:7119:44:1549:-65.6178,0,-564.093	0/1:439:308,131:308:10940:131:4612:-282.969,0,-849.268	0/1:203:176,27:176:6252:27:945:-24.2547,0,-501.063	0/1:138:90,48:90:3177:48:1712:-112.824,0,-243.783	0/1:233:157,76:157:5550:76:2681:-171.387,0,-428.129	0/1:339:237,102:237:8320:102:3605:-222.597,0,-645.981	0/0:89:81,8:81:2879:8:280:0,-1.25237,-232.435	0/1:300:245,55:245:8671:55:1898:-80.7857,0,-688.55	0/1:260:226,34:226:8062:34:1187:-28.8646,0,-645.693	0/1:788:650,138:650:23106:138:4887:-202.772,0,-1837.41	0/1:605:542,63:542:19204:63:2236:-19.3813,0,-1540.58	0/1:342:286,56:286:10120:56:1984:-75.8751,0,-805.481	0/1:422:295,127:295:10481:127:4510:-279.026,0,-814.32	0/0:47:44,3:44:1555:3:104:0,-4.4456,-130.438	0/1:641:558,83:558:19868:83:2917:-69.8049,0,-1590.95	0/1:376:260,116:260:9265:116:4077:-253.843,0,-716.573	0/1:528:372,156:372:13186:156:5441:-330.882,0,-1024.53	0/0:578:538,40:538:19107:40:1410:0,-46.7996,-1585.24	0/1:482:389,93:389:13715:93:3301:-152.213,0,-1084.87	0/1:630:564,66:564:19911:66:2356:-22.6486,0,-1595.06	0/1:562:374,188:374:13196:188:6583:-422.901,0,-1013.7	0/1:141:126,15:126:4472:15:532:-5.57685,0,-358.651	0/1:338:282,56:282:10000:56:1957:-74.656,0,-796.022	0/1:513:413,100:413:14579:100:3552:-165.453,0,-1153.2	0/1:177:143,34:143:5089:34:1185:-53.6704,0,-404.02	0/1:280:243,37:243:8615:37:1320:-34.8136,0,-690.215	0/1:255:217,38:217:7756:38:1348:-44.8576,0,-618.444	0/1:507:420,87:420:14886:87:3104:-126.966,0,-1181.87	0/1:858:679,179:679:24153:179:6357:-313.927,0,-1909.47
chr03	27778030	.	A	T	2570.02	PASS	AB=0.137038;ABP=36718.8;AC=79;AF=0.420213;AN=188;AO=4693;CIGAR=1X;DP=35863;DPB=35863;DPRA=28.8035;EPP=10167.7;EPPR=1405.6;GTI=50;LEN=1;MEANALT=1.13187;MQM=48.7848;MQMR=58.722;NS=94;NUMALT=1;ODDS=591.768;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164525;QR=1100593;RO=31156;RPL=4693;RPP=10193.7;RPPR=67275.8;RPR=0;RUN=1;SAF=4690;SAP=10167.7;SAR=3;SRF=17777;SRP=1351.11;SRR=13379;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:335:314,21:314:11048:21:731:0,-35.8722,-928.382	0/1:822:691,131:691:24397:131:4603:-161.72,0,-1946.35	0/1:435:388,46:388:13651:46:1563:-8.63171,0,-1096.17	0/1:757:647,110:647:22930:110:3844:-112.507,0,-1833.07	0/1:228:196,31:196:6930:31:1060:-26.5173,0,-554.572	0/1:140:120,20:120:4194:20:720:-22.587,0,-333.637	0/1:373:321,52:321:11297:52:1831:-51.0697,0,-903.157	0/1:585:506,79:506:17756:79:2761:-70.0789,0,-1419.24	0/1:675:597,78:597:21066:78:2723:-38.8668,0,-1690.73	0/1:552:463,88:463:16299:88:3069:-106.811,0,-1296.34	0/1:353:305,48:305:10867:48:1698:-43.8677,0,-871.108	0/0:454:422,32:422:14912:32:1127:0,-36.0374,-1240.24	0/0:611:556,55:556:19791:55:1919:0,-11.808,-1605.92	0/1:251:226,25:226:7974:25:846:-0.670015,0,-641.381	0/1:335:295,40:295:10512:40:1395:-23.6016,0,-844.3	0/0:296:276,20:276:9737:20:698:0,-26.1697,-812.615	0/1:495:411,84:411:14577:84:2997:-117.02,0,-1161.89	0/1:393:330,63:330:11669:63:2215:-79.9631,0,-931.548	0/1:260:229,31:229:8162:31:1096:-20.1884,0,-653.294	0/1:525:447,78:447:15784:78:2745:-86.4837,0,-1261.51	0/1:761:671,90:671:23698:90:3138:-52.1868,0,-1899.68	0/1:273:243,30:243:8594:30:1025:-10.2387,0,-691.02	0/1:445:390,55:390:13829:55:1923:-37.5637,0,-1109.12	0/1:641:518,122:518:18264:122:4296:-190.984,0,-1448.66	0/1:409:364,45:364:12885:45:1607:-20.7701,0,-1035.18	0/1:1150:982,168:982:34729:168:5898:-183.772,0,-2775.46	0/1:1067:919,148:919:32443:148:5197:-143.177,0,-2594.49	0/1:304:269,35:269:9542:35:1239:-19.9532,0,-766.218	0/1:538:456,82:456:16084:82:2885:-97.1551,0,-1283.84	0/1:219:191,28:191:6714:28:990:-22.9826,0,-537.389	0/1:314:268,46:268:9388:46:1612:-49.336,0,-749.033	0/1:31:28,3:28:996:3:108:-0.710221,0,-80.358	0/1:51:46,5:46:1640:5:176:-0.784731,0,-132.44	0/1:31:22,9:22:772:9:324:-20.014,0,-60.4693	0/1:36:30,6:30:1054:6:212:-8.48655,0,-84.2951	0/1:21:19,2:19:675:2:68:-0.110053,0,-54.5237	0/0:784:718,64:718:25445:64:2261:0,-33.3796,-2085.99	0/1:261:230,31:230:8064:31:1074:-17.8626,0,-646.525	0/1:382:325,57:325:11493:57:2008:-64.732,0,-918.823	0/0:9:9,0:9:315:0:0:0,-2.70927,-28.6731	0/1:623:518,105:518:18301:105:3699:-143.704,0,-1457.8	0/1:229:200,29:200:7099:29:1012:-21.6526,0,-569.403	0/1:485:429,55:429:15194:55:1952:-29.1587,0,-1219.59	0/1:318:282,36:282:10044:36:1279:-18.61,0,-807.174	0/0:261:238,23:238:8316:23:820:0,-5.06702,-674.621	0/1:390:340,48:340:12028:48:1703:-35.7086,0,-964.738	0/1:373:330,43:330:11661:43:1504:-22.6668,0,-936.566	0/1:402:343,59:343:12088:59:2033:-60.3944,0,-966.486	0/1:277:242,35:242:8592:35:1227:-26.0804,0,-688.874	0/1:607:499,108:499:17624:108:3781:-154.96,0,-1402.28	0/1:294:264,30:264:9275:30:1050:-6.19232,0,-745.741	0/0:36:33,3:33:1172:3:108:0,-0.850005,-95.2863	0/1:797:683,114:683:24138:114:4012:-117.565,0,-1930.5	0/1:158:137,21:137:4842:21:748:-19.9956,0,-388.239	0/0:22:22,0:22:779:0:0:0,-6.62266,-70.4321	0/1:300:259,41:259:9075:41:1456:-40.3345,0,-725.509	0/1:212:185,27:185:6599:27:940:-20.4107,0,-529.615	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7278	0/1:21:19,2:19:676:2:72:-0.50805,0,-54.8349	0/1:224:176,48:176:6208:48:1676:-82.5893,0,-490.825	0/1:601:521,80:521:18474:80:2824:-68.0431,0,-1479.11	0/1:26:23,3:23:800:3:108:-2.1603,0,-64.4149	0/1:549:446,102:446:15737:102:3588:-157.041,0,-1249.59	0/1:485:435,50:435:15350:50:1749:-10.379,0,-1234.86	0/1:194:159,35:159:5612:35:1235:-52.4795,0,-446.353	0/1:253:210,43:210:7336:43:1511:-57.3041,0,-583.251	0/1:442:376,66:376:13292:66:2313:-72.8742,0,-1062.33	0/0:198:183,15:183:6495:15:510:0,-13.7667,-538.619	0/1:140:123,17:123:4357:17:604:-12.3776,0,-349.429	0/1:225:199,26:199:7018:26:906:-13.6924,0,-563.024	0/1:341:302,39:302:10666:39:1380:-21.539,0,-856.725	0/1:92:77,15:77:2707:15:527:-18.8756,0,-216.028	0/1:308:268,40:268:9448:40:1358:-28.8751,0,-756.141	0/1:261:228,33:228:8037:33:1140:-23.5675,0,-644.294	0/1:788:675,113:675:23674:113:3966:-117.114,0,-1891.25	0/1:601:510,90:510:18004:90:3123:-97.2045,0,-1437.14	0/1:347:308,39:308:10844:39:1352:-16.0857,0,-870.869	0/1:417:361,56:361:12719:56:1932:-47.7133,0,-1018.27	0/0:46:44,2:44:1584:2:72:0,-7.04772,-135.969	0/1:636:552,84:552:19395:84:2928:-71.3556,0,-1551.25	0/1:371:319,51:319:11206:51:1754:-43.8685,0,-894.773	0/1:532:478,54:478:16929:54:1853:-5.44283,0,-1361.84	0/1:594:502,92:502:17812:92:3283:-111.979,0,-1420.9	0/1:482:433,48:433:15379:48:1664:-1.78226,0,-1237.54	0/1:644:547,97:547:19211:97:3379:-102.799,0,-1532.56	0/1:569:500,69:500:17706:69:2381:-40.3785,0,-1418.57	0/1:139:123,16:123:4342:16:567:-8.23479,0,-348.852	0/1:346:304,42:304:10708:42:1487:-28.6928,0,-858.557	0/1:517:455,62:455:16061:62:2185:-39.997,0,-1286.84	0/0:179:162,17:162:5748:17:599:0,-0.0192068,-462.995	0/0:280:254,25:254:9009:25:892:0,-4.0001,-729.864	0/0:256:237,19:237:8453:19:663:0,-17.543,-700.343	0/1:501:419,82:419:14749:82:2894:-106.654,0,-1174.66	0/1:862:776,86:776:27483:86:3044:-11.237,0,-2211.21
chr03	27778040	.	C	T	181594	PASS	AB=0.719738;ABP=5695.46;AC=97;AF=0.515957;AN=188;AO=9807;CIGAR=1X;DP=13613;DPB=13613;DPRA=0;EPP=21237.9;EPPR=8206.92;GTI=14;LEN=1;MEANALT=1.04255;MQM=56.4397;MQMR=59.8322;NS=94;NUMALT=1;ODDS=2.08494;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=350752;QR=135552;RO=3802;RPL=9807;RPP=21298.6;RPPR=8241.59;RPR=0;RUN=1;SAF=7;SAP=21237.9;SAR=9800;SRF=4;SRP=8224.24;SRR=3798;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:201:38,163:38:1353:163:5807:-461.347,0,-61.5564	0/1:158:31,127:31:1082:127:4497:-355.99,0,-50.1173	0/1:184:74,110:74:2637:110:3935:-297.686,0,-182.168	0/1:292:57,235:57:2048:235:8421:-668.252,0,-96.6908	0/1:78:31,47:31:1093:47:1679:-127.572,0,-75.1973	0/1:45:12,33:12:417:33:1165:-91.3416,0,-24.2671	0/1:115:41,74:41:1442:74:2660:-204.426,0,-95.4534	0/1:130:38,92:38:1368:92:3276:-255.64,0,-84.2693	0/1:315:53,262:53:1904:262:9298:-740.666,0,-76.8087	0/1:181:45,136:45:1586:136:4876:-382.622,0,-88.5399	0/1:126:33,93:33:1179:93:3336:-262.053,0,-68.4833	0/1:276:102,173:102:3663:173:6212:-475.117,0,-246.557	0/1:317:74,243:74:2656:243:8688:-684.256,0,-143.859	0/1:89:30,59:30:1064:59:2112:-162.834,0,-69.2492	0/1:161:60,101:60:2152:101:3626:-277.232,0,-145.472	0/1:142:68,74:68:2425:74:2662:-196.602,0,-175.756	0/1:96:24,71:24:849:71:2544:-199.668,0,-47.809	0/1:100:24,76:24:864:76:2732:-215.84,0,-47.9796	0/1:120:26,94:26:932:94:3369:-264.565,0,-48.0642	0/1:162:49,113:49:1756:113:4011:-311.765,0,-109.557	0/1:321:67,254:67:2374:254:9040:-715.631,0,-117.279	0/1:111:31,80:31:1116:80:2855:-223.288,0,-67.3328	0/1:193:41,152:41:1468:152:5433:-430.076,0,-74.3173	0/1:221:48,173:48:1709:173:6183:-488.647,0,-87.5371	0/1:183:33,150:33:1188:150:5360:-426.416,0,-52.1397	0/1:420:100,320:100:3562:320:11414:-898.859,0,-194.339	0/1:440:105,335:105:3730:335:11952:-940.335,0,-203.447	0/1:149:35,114:35:1241:114:4075:-321.246,0,-67.1321	0/1:168:54,114:54:1902:114:4078:-315.815,0,-120.849	0/1:55:16,39:16:572:39:1400:-108.739,0,-35.2568	0/1:90:34,56:34:1220:56:2008:-152.633,0,-83.0141	1/1:19:1,18:1:36:18:633:-53.6251,-2.1213,0	0/1:30:9,21:9:309:21:756:-59.2403,0,-19.1098	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	1/1:15:1,14:1:36:14:504:-42.0681,-0.917175,0	0/1:16:6,10:6:216:10:360:-27.6949,0,-14.974	0/1:412:162,250:162:5759:250:8953:-680.974,0,-394.356	0/1:78:21,57:21:741:57:2028:-159.081,0,-43.5313	0/1:151:32,119:32:1152:119:4264:-338.184,0,-58.5346	0/1:7:4,3:4:144:3:108:-7.94851,0,-11.2064	0/1:157:30,127:30:1072:127:4515:-358.174,0,-49.5307	0/1:105:25,80:25:900:80:2853:-224.275,0,-49.7129	0/1:170:55,115:55:1942:115:4112:-318.203,0,-123.875	0/1:117:56,61:56:2012:61:2192:-161.846,0,-146.126	0/1:107:30,77:30:1080:77:2753:-215.466,0,-65.2893	0/1:186:28,158:28:978:158:5676:-454.492,0,-32.3368	0/1:151:44,107:44:1561:107:3852:-301.058,0,-95.3226	0/1:106:40,66:40:1425:66:2372:-181.569,0,-96.6363	0/1:119:45,74:45:1612:74:2647:-201.606,0,-109.547	0/1:153:23,130:23:828:130:4668:-373.454,0,-28.7865	0/1:121:35,86:35:1252:86:3080:-240.384,0,-76.5604	0/1:22:10,12:10:356:12:432:-32.2727,0,-25.7586	0/1:248:45,203:45:1612:203:7224:-574.594,0,-70.7146	0/1:64:17,47:17:593:47:1654:-129.749,0,-34.4288	1/1:6:0,6:0:0:6:208:-19.0591,-1.80618,0	0/1:115:41,74:41:1427:74:2653:-203.596,0,-94.1012	0/1:111:27,84:27:957:84:3000:-236.3,0,-53.0295	0/1:9:3,6:3:104:6:216:-17.0647,0,-6.99354	0/1:9:2,7:2:72:7:252:-20.3031,0,-4.12745	0/1:80:31,49:31:1108:49:1764:-134.448,0,-75.944	0/1:225:62,163:62:2219:163:5860:-459.023,0,-132.241	0/1:11:1,10:1:36:10:352:-28.6212,0,-0.286945	0/1:144:32,112:32:1148:112:4010:-317.391,0,-60.2794	0/1:182:56,126:56:2008:126:4509:-350.787,0,-126.206	0/1:63:29,34:29:1014:34:1224:-91.3662,0,-72.5888	0/1:98:18,80:18:644:80:2854:-227.013,0,-28.7897	0/1:184:69,115:69:2465:115:4094:-312.636,0,-166.711	0/1:100:60,40:60:2133:40:1425:-98.2639,0,-162.129	0/1:57:19,38:19:684:38:1364:-105.172,0,-44.7316	0/1:60:25,35:25:900:35:1248:-94.0237,0,-63.0664	0/1:96:28,68:28:993:68:2433:-189.947,0,-60.7836	0/1:43:9,34:9:324:34:1214:-96.47,0,-16.5616	0/1:136:36,100:36:1277:100:3600:-281.92,0,-74.291	0/1:118:44,74:44:1524:74:2620:-200.105,0,-101.91	0/1:294:48,246:48:1697:246:8823:-703.856,0,-64.5058	0/1:177:52,125:52:1857:125:4473:-348.704,0,-114.124	0/1:103:35,68:35:1228:68:2409:-185.509,0,-79.8085	0/1:126:37,89:37:1313:89:3204:-250.061,0,-80.5399	0/1:28:5,23:5:180:23:828:-66.3322,0,-8.12322	0/1:195:43,152:43:1533:152:5435:-428.538,0,-79.5579	0/1:109:29,80:29:1044:80:2865:-223.686,0,-61.4616	0/1:237:93,144:93:3306:144:5174:-393.386,0,-226.413	0/1:200:46,154:46:1648:154:5517:-435.139,0,-88.4007	0/1:237:52,184:52:1872:184:6616:-523.069,0,-97.3562	0/1:182:41,141:41:1476:141:5034:-397.768,0,-78.3487	0/1:253:90,163:90:3221:163:5837:-447.961,0,-213.935	0/1:38:21,17:21:756:17:612:-43.7425,0,-56.9281	0/1:156:63,93:63:2268:93:3344:-253.319,0,-157.408	0/1:253:60,193:60:2145:193:6921:-545.786,0,-117.155	0/1:82:30,52:30:1080:52:1867:-143.255,0,-72.8288	0/1:143:48,94:48:1709:94:3372:-260.125,0,-111.009	0/1:134:80,54:80:2868:54:1925:-132.309,0,-216.567	0/1:182:32,150:32:1148:150:5365:-426.56,0,-48.8248	0/1:439:110,329:110:3926:329:11783:-926.291,0,-221.377
chr03	27778065	.	G	A	210222	PASS	AB=0.595075;ABP=1549.34;AC=93;AF=0.494681;AN=188;AO=11720;CIGAR=1X;DP=19700;DPB=19700;DPRA=42.3548;EPP=25444;EPPR=17324.8;GTI=1;LEN=1;MEANALT=1.02151;MQM=56.9858;MQMR=59.9035;NS=94;NUMALT=1;ODDS=87.4664;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=420385;QR=284792;RO=7977;RPL=0;RPP=25452.7;RPPR=17324.8;RPR=11720;RUN=1;SAF=11719;SAP=25444;SAR=1;SRF=7977;SRP=17324.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:20:9,11:9:320:11:396:-29.9352,0,-23.1218	0/1:599:200,399:200:7157:399:14279:-1097.05,0,-463.729	0/1:192:59,133:59:2109:133:4761:-368.734,0,-132.244	0/1:652:251,401:251:8985:401:14420:-1099.35,0,-612.304	0/1:70:41,29:41:1472:29:1040:-72.6217,0,-111.704	0/1:76:41,35:41:1457:35:1260:-90.5756,0,-108.538	0/1:190:68,122:68:2436:122:4345:-333.583,0,-162.286	0/1:208:73,135:73:2590:135:4825:-369.71,0,-170.732	0/1:114:47,67:47:1669:67:2404:-182.142,0,-116.178	0/1:423:78,345:78:2780:345:12366:-981.856,0,-123.1	0/1:101:14,87:14:500:87:3128:-251.064,0,-14.9321	0/1:102:22,80:22:784:80:2868:-226.369,0,-40.1789	0/1:181:64,117:64:2300:117:4212:-323.738,0,-152.774	0/1:100:49,51:49:1760:51:1820:-133.086,0,-128.581	0/1:95:37,58:37:1320:58:2088:-159.23,0,-90.4904	0/1:98:34,64:34:1220:64:2304:-176.362,0,-80.6059	0/1:193:36,157:36:1292:157:5637:-447.006,0,-58.4846	0/1:178:59,119:59:2112:119:4280:-331.24,0,-136.766	0/1:63:13,50:13:468:50:1796:-142.205,0,-23.4948	0/1:433:275,157:275:9827:157:5632:-376.412,0,-753.941	0/1:356:149,207:149:5291:207:7413:-559.172,0,-369.134	0/1:158:81,77:81:2908:77:2768:-201.656,0,-214.392	0/1:230:55,175:55:1980:175:6294:-496.664,0,-109.238	0/1:285:68,215:68:2414:215:7724:-607.87,0,-132.035	0/1:78:38,40:38:1356:40:1436:-105.796,0,-98.8601	0/1:805:223,582:223:7969:582:20810:-1628.2,0,-474.903	0/1:518:209,309:209:7439:309:11054:-837.175,0,-513.621	0/1:109:25,84:25:900:84:3020:-238.774,0,-48.5078	0/1:469:282,187:282:10053:187:6712:-462.836,0,-763.019	0/1:553:460,93:460:16398:93:3318:-132.142,0,-1308.34	0/1:285:180,105:180:6441:105:3780:-254.464,0,-493.976	0/1:8:6,2:6:216:2:72:-4.42657,0,-17.3823	0/1:26:13,13:13:464:13:464:-34.0122,0,-34.2707	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:9:7,2:7:252:2:72:-4.12252,0,-20.3197	0/1:8:6,2:6:216:2:72:-4.14173,0,-17.3823	0/1:290:130,160:130:4672:160:5760:-430.937,0,-333.341	0/1:210:87,123:87:3109:123:4412:-332.896,0,-216.819	0/1:102:22,80:22:792:80:2876:-227.625,0,-40.8997	0/1:6:2,4:2:72:4:144:-11.4817,0,-5.03054	0/1:461:70,391:70:2486:391:14006:-1118.47,0,-85.2154	0/1:71:28,43:28:1004:43:1544:-117.211,0,-69.3027	0/1:177:70,107:70:2455:107:3835:-291.426,0,-167.919	0/1:187:59,128:59:2124:128:4589:-355.222,0,-135.136	0/1:137:64,73:64:2285:73:2624:-194.985,0,-164.669	0/1:205:102,103:102:3630:103:3704:-271.704,0,-265.192	0/1:186:122,64:122:4365:64:2296:-150.759,0,-337.028	0/1:317:200,117:200:7138:117:4204:-283.008,0,-547.033	0/1:240:149,91:149:5326:91:3276:-222.8,0,-407.224	0/1:492:169,323:169:6007:323:11600:-895.274,0,-392.61	0/1:254:121,133:121:4329:133:4761:-351.851,0,-312.622	0/1:14:9,5:9:324:5:180:-12.3342,0,-25.2914	0/1:318:71,247:71:2544:247:8872:-699.747,0,-133.377	0/1:65:17,48:17:608:48:1728:-136.12,0,-35.4851	0/1:17:10,7:10:360:7:252:-17.8925,0,-27.6268	0/1:192:68,124:68:2421:124:4404:-337.308,0,-160.311	0/1:73:14,59:14:500:59:2101:-167.194,0,-23.361	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:60:19,41:19:684:41:1476:-114.879,0,-43.8285	0/1:146:64,82:64:2254:82:2933:-219.808,0,-159.17	0/1:235:43,192:43:1548:192:6908:-549.85,0,-68.8555	0/1:13:9,4:9:324:4:140:-9.02647,0,-25.5925	0/1:970:349,621:349:12466:621:22282:-1711.18,0,-829.74	0/1:360:228,132:228:8130:132:4748:-319.052,0,-623.165	0/1:142:72,70:72:2546:70:2520:-184.237,0,-186.62	0/1:221:98,123:98:3457:123:4389:-328.578,0,-244.816	0/1:405:257,148:257:9175:148:5324:-356.574,0,-703.766	0/1:161:59,102:59:2108:102:3649:-279.093,0,-141.523	0/1:32:15,17:15:540:17:612:-45.6945,0,-39.3036	0/1:139:83,56:83:2950:56:2016:-139.732,0,-223.887	0/1:137:68,69:68:2429:69:2484:-182.532,0,-177.623	0/1:71:17,54:17:597:54:1906:-149.937,0,-32.6768	0/1:172:66,106:66:2360:106:3797:-289.692,0,-160.881	0/1:142:28,114:28:1004:114:4088:-322.447,0,-47.9062	0/1:330:148,182:148:5259:182:6528:-486.789,0,-373.788	0/1:591:137,454:137:4893:454:16293:-1285.86,0,-262.613	0/1:136:68,68:68:2440:68:2440:-178.113,0,-178.915	0/1:363:176,187:176:6274:187:6697:-492.303,0,-455.456	0/1:20:10,10:10:360:10:360:-26.7024,0,-26.7237	0/1:337:72,265:72:2573:265:9498:-751.723,0,-130.371	0/1:218:146,72:146:5224:72:2588:-167.268,0,-404.671	0/1:318:187,131:187:6716:131:4689:-326.181,0,-508.206	0/1:250:41,209:41:1472:209:7505:-597.685,0,-57.5049	0/1:173:59,114:59:2124:114:4096:-316.699,0,-139.35	0/1:259:59,200:59:2088:200:7184:-567.853,0,-110.2	0/1:238:113,125:113:4021:125:4496:-332.953,0,-290.422	0/1:65:18,47:18:644:47:1692:-131.405,0,-38.7236	0/1:104:24,80:24:856:80:2865:-224.239,0,-46.054	0/1:144:48,96:48:1705:96:3452:-267.212,0,-110.385	0/1:58:17,41:17:612:41:1468:-114.356,0,-37.9537	0/1:75:21,54:21:752:54:1936:-151.088,0,-45.429	0/1:102:25,77:25:896:77:2764:-217.585,0,-50.2553	0/1:241:172,69:172:6145:69:2480:-150.859,0,-480.591	0/1:263:96,167:96:3436:167:6008:-461.494,0,-230.276
chr03	27778075	.	CCTT	CCTG,TCTG	416870	PASS	AB=0.82617,0.166963;ABP=7269.85,7579.04;AC=147,41;AF=0.781915,0.218085;AN=188;AO=17918,1361;CIGAR=3M1X,1X2M1X;DP=19401;DPB=19400.8;DPRA=0,1.13029;EPP=38807.3,2958.38;EPPR=31.2394;GTI=10;LEN=1,4;MEANALT=2.46809,2.98039;MQM=58.9958,48.0602;MQMR=60;NS=94;NUMALT=2;ODDS=581.537;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=640078,48299;QR=459;RO=13;RPL=11,0;RPP=38816,2958.38;RPPR=31.2394;RPR=17907,1361;RUN=1,1;SAF=17917,1361;SAP=38902.8,2958.38;SAR=1,0;SRF=13;SRP=31.2394;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:21:0,21,0:0:0:21,0:744,0:-67.2507,-6.32163,0,-67.2507,-6.32163,-67.2507	1/2:596:0,463,127:0:0:463,127:16566,4523:-1713.06,-363.998,-224.622,-1349.12,0,-1310.89	1/2:190:0,150,39:0:0:150,39:5318,1374:-543.574,-110.551,-65.3967,-433.139,0,-421.399	1/1:641:1,634,0:1:34:634,0:22587,0:-2027.47,-188.091,0,-2027.77,-190.853,-2030.53	1/2:70:0,61,9:0:0:61,9:2184,322:-204.508,-26.4194,-8.0566,-178.444,0,-175.735	1/1:74:0,69,5:0:0:69,5:2460,180:-221.224,-20.7711,0,-206.715,-5.90658,-205.21	1/2:188:0,161,27:0:0:161,27:5760,962:-547.982,-78.3524,-29.8865,-469.984,0,-461.856	1/2:206:0,165,40:0:0:165,40:5871,1419:-592.226,-114.317,-64.6469,-478.057,0,-466.016	1/1:112:0,112,0:0:0:112,0:3975,0:-357.79,-33.7154,0,-357.79,-33.7154,-357.79	1/2:416:2,349,61:2:72:349,61:12451,2151:-1180.67,-168.266,-69.0817,-1007.17,0,-994.677	1/2:101:0,87,13:0:0:87,13:3093,467:-289.921,-37.8926,-11.703,-252.031,0,-248.117	1/2:100:0,76,24:0:0:76,24:2716,847:-289.528,-68.5086,-45.6304,-221.37,0,-214.146	1/1:177:0,175,0:0:0:175,0:6271,0:-563.241,-52.6803,0,-563.241,-52.6803,-563.241	1/1:98:0,97,0:0:0:97,0:3450,0:-310.013,-29.1999,0,-310.013,-29.1999,-310.013	1/2:95:0,74,19:0:0:74,19:2627,683:-269.578,-55.5795,-33.3033,-214.113,0,-208.393	1/2:97:0,74,21:0:0:74,21:2652,749:-275.757,-59.6349,-37.3587,-216.122,0,-209.8	1/2:189:0,161,28:0:0:161,28:5784,1000:-551.6,-80.4765,-32.0106,-471.476,0,-463.047	1/1:182:0,182,0:0:0:182,0:6516,0:-585.857,-54.7875,0,-585.857,-54.7875,-585.857	1/2:62:0,48,13:0:0:48,13:1712,467:-177.158,-37.7732,-23.3238,-139.511,0,-135.597	1/1:421:1,418,0:1:30:418,0:14927,0:-1340,-123.44,0,-1340.31,-125.831,-1342.7	1/1:344:0,344,0:0:0:344,0:12264,0:-1103.14,-103.554,0,-1103.14,-103.554,-1103.14	1/1:158:0,157,0:0:0:157,0:5587,0:-502.398,-47.2617,0,-502.398,-47.2617,-502.398	1/2:232:1,199,32:1:36:199,32:7107,1136:-668.07,-88.996,-32.0287,-576.431,0,-569.736	1/2:283:0,246,32:0:0:246,32:8801,1137:-809.069,-91.9088,-17.8554,-717.208,0,-707.575	1/1:78:0,78,0:0:0:78,0:2776,0:-249.91,-23.4803,0,-249.91,-23.4803,-249.91	1/2:799:0,708,85:0:0:708,85:25286,2981:-2303.21,-241.911,-28.7813,-2061.32,0,-2035.73	1/1:508:0,503,0:0:0:503,0:17993,0:-1617.61,-151.418,0,-1617.61,-151.418,-1617.61	1/2:108:0,90,17:0:0:90,17:3225,600:-311.543,-48.5782,-21.4855,-263.033,0,-257.915	1/1:451:1,447,0:1:36:447,0:15989,0:-1434.8,-131.607,0,-1435.1,-134.56,-1438.04	1/1:540:1,539,0:1:36:539,0:19231,0:-1726.03,-158.958,0,-1726.33,-162.255,-1729.27	1/1:279:1,276,0:1:36:276,0:9884,0:-885.833,-80.1296,0,-886.134,-83.0843,-889.071	1/1:8:0,8,0:0:0:8,0:288,0:-26.2656,-2.40824,0,-26.2656,-2.40824,-26.2656	1/2:26:0,20,5:0:0:20,5:712,180:-72.4839,-14.5597,-8.53905,-57.9217,0,-56.4165	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:9:0,9,0:0:0:9,0:324,0:-29.5011,-2.70927,0,-29.5011,-2.70927,-29.5011	1/1:8:0,8,0:0:0:8,0:284,0:-25.6279,-2.40824,0,-25.6279,-2.40824,-25.6279	1/1:278:0,276,1:0:0:276,1:9879,36:-888.547,-83.0843,0,-885.618,-80.0954,-885.317	1/2:211:0,175,35:0:0:175,35:6247,1248:-610.109,-101.083,-48.4029,-509.128,0,-498.592	1/1:101:0,93,8:0:0:93,8:3340,270:-300.165,-27.9958,0,-278.504,-5.99857,-276.096	1/2:6:0,5,1:0:0:5,1:180,29:-17.3365,-2.59354,-1.08839,-15.0441,0,-14.7431	1/2:455:0,408,44:0:0:408,44:14535,1549:-1308.74,-124.874,-2.05326,-1183.93,0,-1170.69	1/1:70:0,70,0:0:0:70,0:2490,0:-223.688,-21.0721,0,-223.688,-21.0721,-223.688	1/2:171:0,151,18:0:0:151,18:5381,648:-490.985,-52.4776,-7.02205,-438.519,0,-433.101	1/2:186:0,137,48:0:0:137,48:4897,1704:-537.49,-138.338,-97.0967,-399.298,0,-384.849	1/1:133:0,132,0:0:0:132,0:4744,0:-426.626,-39.736,0,-426.626,-39.736,-426.626	1/1:203:0,199,0:0:0:199,0:7132,0:-641.531,-59.905,0,-641.531,-59.905,-641.531	1/1:180:0,179,0:0:0:179,0:6386,0:-574.443,-53.8844,0,-574.443,-53.8844,-574.443	1/1:308:1,305,0:1:36:305,0:10892,0:-976.548,-88.8634,0,-976.849,-91.8142,-979.787	1/1:239:1,236,0:1:36:236,0:8439,0:-755.911,-68.1057,0,-756.212,-71.0431,-759.149	1/1:480:0,479,0:0:0:479,0:17163,0:-1543.55,-144.193,0,-1543.55,-144.193,-1543.55	1/1:253:0,250,1:0:0:250,1:8917,27:-801.724,-75.2575,0,-799.62,-73.1816,-799.319	1/1:14:0,14,0:0:0:14,0:496,0:-44.9709,-4.21442,0,-44.9709,-4.21442,-44.9709	1/1:317:0,290,25:0:0:290,25:10384,897:-931.946,-87.2987,0,-859.665,-15.0108,-852.139	1/2:64:0,54,9:0:0:54,9:1914,323:-182.197,-26.2737,-10.018,-155.921,0,-153.211	1/1:17:0,17,0:0:0:17,0:612,0:-55.3947,-5.11751,0,-55.3947,-5.11751,-55.3947	1/2:190:0,148,40:0:0:148,40:5300,1410:-546.057,-113.968,-69.4156,-432.133,0,-420.092	1/2:73:0,65,8:0:0:65,8:2304,288:-211.186,-23.5318,-3.9649,-188.009,0,-185.601	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/2:60:0,45,12:0:0:45,12:1612,419:-165.415,-33.943,-20.3966,-131.464,0,-127.852	1/2:144:0,130,14:0:0:130,14:4632,504:-418.661,-41.1682,-2.03429,-377.85,0,-373.635	1/2:235:0,195,40:0:0:195,40:6944,1426:-681.395,-115.772,-57.071,-565.977,0,-553.936	1/1:13:0,13,0:0:0:13,0:468,0:-42.455,-3.91339,0,-42.455,-3.91339,-42.455	1/1:956:0,951,1:0:0:951,1:34018,30:-3059.5,-286.28,0,-3057.11,-283.886,-3056.81	1/1:355:0,350,3:0:0:350,3:12528,108:-1126.81,-105.361,0,-1118.04,-96.5903,-1117.14	1/1:141:0,140,0:0:0:140,0:4995,0:-449.281,-42.1442,0,-449.281,-42.1442,-449.281	1/1:215:0,215,0:0:0:215,0:7641,0:-687.694,-64.7215,0,-687.694,-64.7215,-687.694	1/1:397:0,396,0:0:0:396,0:14149,0:-1272.5,-119.208,0,-1272.5,-119.208,-1272.5	1/2:158:0,110,46:0:0:110,46:3941,1649:-454.888,-133.48,-100.367,-321.434,0,-307.586	1/1:30:0,30,0:0:0:30,0:1076,0:-97.0676,-9.0309,0,-97.0676,-9.0309,-97.0676	1/1:133:0,133,0:0:0:133,0:4756,0:-428.066,-40.037,0,-428.066,-40.037,-428.066	1/1:139:0,139,0:0:0:139,0:4972,0:-447.59,-41.8432,0,-447.59,-41.8432,-447.59	1/2:67:0,54,13:0:0:54,13:1932,453:-194.398,-36.8873,-20.6317,-157.859,0,-153.946	1/1:164:0,164,0:0:0:164,0:5852,0:-526.358,-49.3689,0,-526.358,-49.3689,-526.358	1/2:143:0,96,46:0:0:96,46:3436,1620:-409.554,-129.618,-100.719,-280.034,0,-266.187	1/1:323:1,320,0:1:35:320,0:11431,0:-1024.57,-93.4586,0,-1024.87,-96.3296,-1027.72	1/2:582:0,487,94:0:0:487,94:17401,3330:-1688.05,-269.699,-123.097,-1418.45,0,-1390.15	1/2:132:0,118,14:0:0:118,14:4236,498:-385.804,-40.4524,-4.93083,-345.704,0,-341.49	1/1:362:1,358,2:1:36:358,2:12817,72:-1148.59,-104.83,0,-1143.09,-101.964,-1145.42	1/1:21:0,21,0:0:0:21,0:744,0:-67.267,-6.32163,0,-67.267,-6.32163,-67.267	1/2:333:0,289,44:0:0:289,44:10341,1579:-970.825,-128.179,-41.181,-843.003,0,-829.758	1/1:214:1,212,0:1:36:212,0:7577,0:-678.208,-60.8809,0,-678.509,-63.8184,-681.446	1/1:315:0,312,1:0:0:312,1:11130,36:-1001.07,-93.9214,0,-998.144,-90.9973,-997.843	1/2:247:0,200,46:0:0:200,46:7116,1642:-711.781,-131.931,-71.7247,-579.845,0,-565.998	1/1:173:0,173,0:0:0:173,0:6200,0:-558.05,-52.0782,0,-558.05,-52.0782,-558.05	1/2:253:0,211,40:0:0:211,40:7531,1427:-729.552,-115.813,-52.2957,-613.773,0,-601.731	1/1:237:0,236,1:0:0:236,1:8434,36:-758.405,-71.0431,0,-755.482,-67.7611,-755.181	1/2:64:0,48,16:0:0:48,16:1700,575:-184.313,-46.1134,-31.664,-138.551,0,-133.734	1/2:102:0,80,22:0:0:80,22:2860,781:-295.227,-62.3051,-38.2227,-233.27,0,-226.648	1/1:145:0,144,0:0:0:144,0:5158,0:-463.787,-43.3483,0,-463.787,-43.3483,-463.787	1/2:57:0,45,12:0:0:45,12:1616,425:-166.21,-34.725,-21.1787,-131.838,0,-128.226	1/2:74:0,52,22:0:0:52,22:1860,760:-212.986,-61.3337,-45.6801,-151.998,0,-145.376	1/2:99:0,62,37:0:0:62,37:2184,1322:-285.314,-107.556,-88.8924,-178.112,0,-166.974	1/1:234:0,230,0:0:0:230,0:8175,0:-735.427,-69.2369,0,-735.427,-69.2369,-735.427	1/1:258:0,257,0:0:0:257,0:9208,0:-828.164,-77.3647,0,-828.164,-77.3647,-828.164
chr03	27778138	.	A	T	629582	PASS	AB=0.792446;ABP=21656.5;AC=108;AF=0.574468;AN=188;AO=26898;CIGAR=1X;DP=33222;DPB=33222;DPRA=0;EPP=58411.3;EPPR=13702.8;GTI=31;LEN=1;MEANALT=1.1383;MQM=45.0714;MQMR=55.771;NS=94;NUMALT=1;ODDS=3.6949;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=956927;QR=225184;RO=6309;RPL=9406;RPP=5281.4;RPPR=13676.8;RPR=17492;RUN=1;SAF=9406;SAP=5281.4;SAR=17492;SRF=3;SRP=13676.8;SRR=6306;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:278:29,249:29:1016:249:8895:-667.529,0,-8.0174	1/1:441:11,430:11:396:430:15312:-1306.63,-96.7715,0	0/1:417:76,341:76:2732:341:12191:-919.789,0,-120.54	0/1:899:132,767:132:4714:767:27277:-2083.46,0,-152.547	0/1:163:19,144:19:684:144:5131:-397.728,0,-12.7774	0/1:99:27,72:27:964:72:2576:-195.377,0,-57.2749	0/1:165:27,138:27:955:138:4860:-372.948,0,-36.4963	0/1:423:49,374:49:1764:374:13337:-1033,0,-31.573	0/1:549:111,438:111:3966:438:15624:-1170.5,0,-191.616	0/1:582:105,477:105:3716:477:16972:-1274.06,0,-157.759	0/1:227:49,178:49:1743:178:6349:-473.187,0,-88.5754	0/1:317:99,218:99:3487:218:7754:-568.964,0,-218.28	0/1:480:118,361:118:4193:361:12871:-952.334,0,-232.999	0/1:194:65,129:65:2328:129:4596:-332.044,0,-151.156	0/1:267:85,182:85:3048:182:6444:-465.284,0,-193.905	0/1:176:58,118:58:2066:118:4215:-305.902,0,-133.162	0/1:219:45,174:45:1616:174:6228:-473.753,0,-79.804	0/1:230:50,180:50:1746:180:6415:-486.674,0,-87.8634	0/1:177:26,151:26:924:151:5381:-408.897,0,-30.1949	0/1:554:86,467:86:3056:467:16599:-1261.93,0,-107.807	0/1:887:96,790:96:3440:790:28125:-2118.12,0,-42.6027	1/1:422:34,388:34:1211:388:13779:-1093.9,-18.3484,0	0/1:565:83,481:83:2968:481:17105:-1296.11,0,-96.7186	1/1:505:45,460:45:1616:460:16365:-1259.74,-6.39765,0	0/1:435:65,370:65:2322:370:13152:-981.622,0,-77.5487	0/1:1430:160,1270:160:5727:1270:45135:-3508.02,0,-83.095	1/1:1047:77,970:77:2760:970:34468:-2690.7,-66.9694,0	0/1:221:41,180:41:1464:180:6409:-474.697,0,-65.5132	0/1:646:214,432:214:7662:432:15366:-1146.07,0,-491.519	0/1:224:29,195:29:1036:195:6968:-530.151,0,-25.9874	0/1:327:82,245:82:2917:245:8673:-649.206,0,-163.486	1/1:16:1,15:1:36:15:532:-41.9927,-1.21821,0	1/1:28:0,28:0:0:28:1000:-86.2147,-8.42884,0	1/1:27:1,26:1:36:26:936:-76.9249,-4.52954,0	0/1:43:21,22:21:743:22:779:-54.2184,0,-54.1142	0/1:20:7,13:7:237:13:464:-34.7383,0,-15.6385	0/1:763:253,510:253:9019:510:18204:-1337.91,0,-576.618	0/1:318:56,262:56:2012:262:9266:-705.219,0,-85.5252	0/1:236:38,198:38:1360:198:7045:-533.31,0,-51.3557	1/1:5:0,5:0:0:5:176:-15.2572,-1.50515,0	0/1:546:65,481:65:2328:481:17118:-1316.07,0,-45.1035	0/1:173:36,137:36:1288:137:4883:-359.668,0,-63.6703	0/1:390:45,345:45:1612:345:12300:-933.296,0,-27.877	0/1:217:58,159:58:2057:159:5644:-414.552,0,-119.643	0/1:233:76,157:76:2691:157:5599:-404.034,0,-171.604	0/1:660:133,527:133:4780:527:18814:-1427.38,0,-229.328	0/1:307:77,230:77:2723:230:8193:-619.364,0,-152.875	0/1:384:112,272:112:4011:272:9699:-717.957,0,-244.014	0/1:367:95,272:95:3387:272:9718:-718.316,0,-193.775	0/1:547:92,454:92:3295:454:16083:-1228.79,0,-131.253	0/1:435:106,329:106:3804:329:11621:-874.099,0,-210.177	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	1/1:543:33,510:33:1184:510:18214:-1461.18,-56.6392,0	0/1:211:29,182:29:1036:182:6467:-497.915,0,-29.8911	1/1:13:0,13:0:0:13:468:-40.7511,-3.91339,0	0/1:383:102,281:102:3623:281:9999:-734.997,0,-209.956	0/1:195:26,166:26:920:166:5870:-450.589,0,-24.8844	0/1:9:1,8:1:36:8:279:-21.9413,0,-0.879958	0/1:34:7,27:7:252:27:950:-73.8491,0,-12.7609	0/1:237:30,207:30:1065:207:7312:-560.374,0,-24.8156	0/1:497:109,388:109:3896:388:13848:-1018.49,0,-200.153	1/1:14:0,14:0:0:14:481:-42.2331,-4.21442,0	0/1:1055:175,880:175:6275:880:31301:-2401.41,0,-244.602	0/1:454:70,384:70:2489:384:13636:-1032.19,0,-87.1733	0/1:211:56,155:56:1982:155:5528:-413.826,0,-115.073	0/1:348:56,291:56:1990:291:10300:-782.913,0,-74.0947	0/1:435:62,373:62:2216:373:13274:-1016.52,0,-68.193	0/1:268:65,203:65:2315:203:7252:-533.421,0,-127.75	0/1:81:28,53:28:999:53:1891:-136.312,0,-65.743	0/1:189:36,153:36:1292:153:5456:-415.786,0,-59.6442	0/1:177:67,109:67:2395:109:3851:-278.936,0,-161.196	0/1:116:13,103:13:468:103:3648:-282.098,0,-7.48418	0/1:501:113,388:113:4032:388:13829:-1033.54,0,-212.07	0/1:278:90,187:90:3223:187:6679:-486.809,0,-206.42	0/1:719:141,578:141:5005:578:20535:-1542.02,0,-233.442	1/1:725:48,677:48:1715:677:24098:-1907.39,-63.9116,0	1/1:273:24,249:24:864:249:8850:-692.123,-4.18861,0	0/1:340:81,259:81:2912:259:9238:-691.361,0,-159.802	0/1:25:3,22:3:108:22:784:-61.0714,0,-2.54098	0/1:574:54,520:54:1940:520:18494:-1411.27,0,-2.02945	0/1:248:59,189:59:2109:189:6716:-507.727,0,-115.194	0/1:714:222,492:222:7941:492:17507:-1275.39,0,-497.902	0/1:385:82,302:82:2937:302:10724:-799.841,0,-147.951	0/1:473:95,378:95:3372:378:13432:-996.143,0,-160.142	0/1:358:67,291:67:2393:291:10397:-788.503,0,-107.289	0/1:480:171,309:171:6068:309:10961:-786.889,0,-399.68	0/1:103:22,81:22:762:81:2873:-219.143,0,-37.8465	0/1:216:75,141:75:2692:141:5015:-365.599,0,-176.342	0/1:387:77,309:77:2747:309:11023:-824.489,0,-130.716	0/1:77:30,47:30:1076:47:1671:-121.179,0,-73.9179	0/1:228:66,162:66:2350:162:5752:-412.539,0,-143.113	0/1:187:81,106:81:2904:106:3766:-264.067,0,-205.111	0/1:534:117,415:117:4187:415:14710:-1102.97,0,-213.97	0/1:632:161,471:161:5758:471:16702:-1225.13,0,-325.861
chr03	27793684	.	A	G	33771.5	PASS	AB=0.503702;ABP=3.49261;AC=51;AF=0.271277;AN=188;AO=2058;CIGAR=1X;DP=8972;DPB=8972;DPRA=0.854887;EPP=4471.9;EPPR=14994.9;GTI=2;LEN=1;MEANALT=1.01724;MQM=59.9631;MQMR=59.9899;NS=94;NUMALT=1;ODDS=1.79609;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72743;QR=246636;RO=6912;RPL=1;RPP=4463.22;RPPR=14986.2;RPR=2057;RUN=1;SAF=1;SAP=4463.22;SAR=2057;SRF=5;SRP=14968.8;SRR=6907;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:29,34:29:1040:34:1188:-88.2572,0,-74.9495	0/1:61:39,22:39:1395:22:788:-52.882,0,-107.486	0/1:152:63,89:63:2248:89:3135:-236.619,0,-156.827	0/0:218:218,0:218:7800:0:0:0,-65.6245,-702.03	0/1:32:23,9:23:820:9:306:-18.2356,0,-64.4896	0/1:19:5,14:5:180:14:485:-38.2574,0,-10.8325	0/1:32:16,16:16:576:16:572:-42.1805,0,-42.542	0/1:148:81,67:81:2894:67:2370:-168.816,0,-216.143	0/0:61:61,0:61:2161:0:0:0,-18.3628,-194.755	0/1:90:45,45:45:1591:45:1585:-115.846,0,-116.387	0/1:91:42,49:42:1484:49:1716:-127.329,0,-106.461	0/1:130:68,62:68:2366:62:2199:-159.041,0,-174.06	0/0:105:105,0:105:3745:0:0:0,-31.6081,-337.249	0/0:106:106,0:106:3783:0:0:0,-31.9092,-340.669	0/1:92:46,46:46:1622:46:1629:-119.202,0,-118.573	0/1:90:45,45:45:1616:45:1607:-117.827,0,-118.637	0/1:45:21,24:21:743:24:856:-63.8148,0,-53.647	0/0:49:49,0:49:1744:0:0:0,-14.7505,-157.244	0/1:53:29,24:29:1025:24:860:-61.7672,0,-76.6061	0/0:203:202,1:202:7235:1:27:0,-58.4093,-648.502	0/0:155:155,0:155:5532:0:0:0,-46.6596,-498.005	0/0:152:152,0:152:5422:0:0:0,-45.7566,-488.095	0/1:131:76,54:76:2709:54:1932:-134.81,0,-204.707	0/1:49:24,25:24:856:25:896:-66.2099,0,-62.6106	0/0:74:72,2:72:2571:2:72:0,-15.4395,-224.803	0/1:253:132,121:132:4727:121:4273:-308.586,0,-349.428	0/0:277:277,0:277:9902:0:0:0,-83.3853,-891.122	0/1:35:18,17:18:648:17:608:-44.516,0,-48.1158	0/0:246:246,0:246:8764:0:0:0,-74.0534,-788.747	0/0:149:148,1:148:5248:1:36:0,-41.2552,-468.851	0/0:102:102,0:102:3647:0:0:0,-30.7051,-328.434	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:17:6,11:6:212:11:392:-30.5025,0,-14.3073	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:208:208,0:208:7431:0:0:0,-62.6142,-668.834	0/1:189:88,101:88:3106:101:3580:-265.513,0,-222.872	0/1:69:35,34:35:1251:34:1194:-86.9927,0,-92.1232	1/1:6:0,6:0:0:6:198:-18.1433,-1.80618,0	0/1:92:49,43:49:1751:43:1507:-108.225,0,-130.179	0/0:27:27,0:27:951:0:0:0,-8.12781,-85.9043	0/1:128:69,59:69:2459:59:2044:-145.695,0,-183.032	0/1:67:23,44:23:811:44:1561:-120.611,0,-53.141	0/0:99:99,0:99:3543:0:0:0,-29.802,-319.078	0/0:116:116,0:116:4154:0:0:0,-34.9195,-373.955	0/0:116:116,0:116:4153:0:0:0,-34.9195,-373.951	0/0:171:169,2:169:6023:2:72:0,-44.6394,-535.338	0/0:81:80,1:80:2847:1:36:0,-20.7852,-252.867	0/0:163:163,0:163:5813:0:0:0,-49.0679,-523.284	0/0:98:98,0:98:3486:0:0:0,-29.5009,-313.952	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:161:80,81:80:2859:81:2852:-208.45,0,-209.081	0/1:66:40,26:40:1436:26:907:-62.0734,0,-109.67	0/1:10:3,7:3:104:7:248:-19.6539,0,-6.69251	0/1:166:85,81:85:3043:81:2845:-206.316,0,-224.128	0/1:52:24,28:24:864:28:1008:-75.3828,0,-62.429	0/1:8:5,3:5:176:3:108:-7.66693,0,-13.7768	0/1:8:4,4:4:140:4:144:-10.9054,0,-10.5363	0/1:75:39,36:39:1383:36:1292:-94.0003,0,-102.191	0/1:134:63,71:63:2259:71:2523:-186.984,0,-163.234	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/0:175:175,0:175:6244:0:0:0,-52.6802,-562.055	0/0:157:156,1:156:5577:1:36:0,-43.6634,-498.454	0/0:70:70,0:70:2495:0:0:0,-21.0721,-224.803	0/0:83:83,0:83:2968:0:0:0,-24.9855,-267.353	0/0:103:103,0:103:3681:0:0:0,-31.0061,-331.492	0/1:175:64,111:64:2300:111:3954:-303.372,0,-154.581	0/0:64:64,0:64:2284:0:0:0,-19.2659,-205.822	0/0:35:35,0:35:1243:0:0:0,-10.536,-112.174	0/0:47:47,0:47:1670:0:0:0,-14.1484,-150.586	0/1:29:16,13:16:572:13:460:-33.0055,0,-43.0836	0/0:126:126,0:126:4460:0:0:0,-37.9298,-401.57	0/1:87:53,34:53:1900:34:1211:-83.1059,0,-145.088	0/0:131:130,0:130:4630:0:0:0,-39.1339,-415.687	0/1:181:98,83:98:3511:83:2914:-208.008,0,-261.713	0/1:70:43,27:43:1544:27:946:-63.8225,0,-118.181	0/0:120:120,0:120:4284:0:0:0,-36.1236,-385.739	0/1:21:12,9:12:428:9:320:-22.8207,0,-32.5372	0/1:130:58,72:58:2088:72:2541:-189.807,0,-149.056	0/0:74:74,0:74:2638:0:0:0,-22.2762,-237.666	0/0:171:170,1:170:6096:1:36:0,-47.8779,-545.142	0/1:59:29,30:29:1036:30:1046:-76.6876,0,-75.7931	0/0:94:94,0:94:3351:0:0:0,-28.2968,-301.807	0/1:62:25,37:25:888:37:1305:-99.0855,0,-61.5752	0/0:134:132,2:132:4720:2:72:0,-33.5013,-418.123	0/1:36:19,17:19:680:17:599:-43.401,0,-50.6921	0/1:78:37,41:37:1316:41:1464:-108.576,0,-95.2615	0/0:84:84,0:84:3008:0:0:0,-25.2865,-270.951	0/1:88:39,49:39:1395:49:1722:-128.773,0,-99.3577	0/1:135:72,63:72:2571:63:2222:-159.604,0,-191	0/1:80:25,55:25:896:55:1956:-152.233,0,-56.878	0/0:114:114,0:114:4057:0:0:0,-34.3174,-365.317	0/0:118:118,0:118:4208:0:0:0,-35.5215,-378.9
chr03	28151039	.	C	T	29222.9	PASS	AB=0.446939;ABP=110.857;AC=43;AF=0.228723;AN=188;AO=1993;CIGAR=1X;DP=9116;DPB=9116;DPRA=1.07558;EPP=58.1687;EPPR=1009.48;GTI=0;LEN=1;MEANALT=1;MQM=40.7416;MQMR=59.9433;NS=94;NUMALT=1;ODDS=12.5963;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71389;QR=253630;RO=7123;RPL=2;RPP=4313.4;RPPR=12198.9;RPR=1991;RUN=1;SAF=1111;SAP=60.1474;SAR=882;SRF=4869;SRP=2087.67;SRR=2254;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:12,11:12:417:11:392:-18.6665,0,-30.9365	0/1:57:35,22:35:1248:22:788:-32.0516,0,-95.4662	0/1:50:24,26:24:852:26:928:-49.8539,0,-61.9489	0/0:71:71,0:71:2516:0:0:0,-21.3731,-226.69	0/1:21:13,8:13:468:8:288:-18.2059,0,-36.138	0/1:31:14,17:14:504:17:612:-35.7304,0,-36.3662	0/1:76:25,51:25:884:51:1828:-106.56,0,-57.0001	0/1:70:38,32:38:1347:32:1148:-65.3572,0,-100.457	0/0:88:87,1:87:3105:1:36:0,-24.796,-277.981	0/1:40:15,25:15:519:25:888:-49.9662,0,-34.9955	0/1:299:214,85:214:7648:85:3052:-140.266,0,-598.35	0/1:153:70,83:70:2492:83:2964:-156.786,0,-178.195	0/0:139:139,0:139:4915:0:0:0,-41.8432,-442.493	0/0:191:191,0:191:6782:0:0:0,-57.4967,-610.454	0/1:131:59,72:59:2124:72:2588:-140.873,0,-151.987	0/1:120:49,71:49:1755:71:2556:-152.961,0,-122.11	0/1:131:50,81:50:1751:81:2916:-164.89,0,-118.365	0/0:105:105,0:105:3724:0:0:0,-31.6081,-335.362	0/1:163:107,56:107:3828:56:2012:-108.236,0,-295.649	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.955	0/0:38:38,0:38:1343:0:0:0,-11.4391,-121.169	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/1:41:22,19:22:788:19:684:-35.7576,0,-58.9026	0/1:40:17,23:17:612:23:824:-38.3375,0,-43.3722	0/0:44:44,0:44:1563:0:0:0,-13.2453,-140.961	0/1:75:31,44:31:1095:44:1575:-84.1643,0,-76.2818	0/0:73:73,0:73:2607:0:0:0,-21.9752,-234.878	0/1:77:34,43:34:1212:43:1535:-87.184,0,-86.207	0/0:88:88,0:88:3156:0:0:0,-26.4906,-284.265	0/0:41:39,2:39:1383:2:72:0,-9.12235,-121.548	0/0:66:65,1:65:2319:1:36:0,-18.1733,-207.275	0/0:159:159,0:159:5692:0:0:0,-47.8638,-512.398	0/0:84:77,7:77:2752:7:243:0,-5.77272,-228.409	0/0:78:77,1:77:2742:1:27:0,-20.7806,-244.322	0/0:210:210,0:210:7489:0:0:0,-63.2163,-674.054	0/0:171:171,0:171:6116:0:0:0,-51.4761,-550.541	0/0:239:239,0:239:8509:0:0:0,-71.9462,-765.815	0/1:36:14,22:14:492:22:792:-43.5448,0,-33.7753	0/1:260:182,78:182:6507:78:2787:-129.305,0,-507.447	0/0:77:76,1:76:2715:1:36:0,-21.4846,-242.898	0/1:56:25,31:25:888:31:1116:-54.6589,0,-61.9269	0/0:160:159,1:159:5636:1:36:0,-44.5716,-503.769	0/1:43:21,22:21:737:22:788:-36.266,0,-53.7063	0/1:165:77,88:77:2724:88:3151:-164.495,0,-195.712	0/0:95:95,0:95:3312:0:0:0,-28.5978,-298.298	0/0:44:44,0:44:1567:0:0:0,-13.2453,-141.32	0/0:31:31,0:31:1098:0:0:0,-9.33193,-99.1286	0/0:36:36,0:36:1283:0:0:0,-10.8371,-115.773	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.634	0/0:63:63,0:63:2247:0:0:0,-18.9649,-202.493	0/0:169:168,1:168:5980:1:32:0,-47.6749,-535.108	0/1:49:28,21:28:973:21:743:-34.2747,0,-73.1296	0/1:30:18,12:18:631:12:432:-23.2706,0,-48.0848	0/0:40:40,0:40:1415:0:0:0,-12.0412,-127.647	0/1:48:22,26:22:779:26:923:-42.5379,0,-55.9826	0/1:30:11,19:11:396:19:672:-40.0568,0,-26.9518	0/0:128:128,0:128:4576:0:0:0,-38.5318,-412.006	0/0:48:47,1:47:1665:1:36:0,-12.7548,-148.441	0/1:46:27,19:27:968:19:680:-37.3372,0,-73.59	0/1:191:81,110:81:2889:110:3922:-214.737,0,-202.748	0/0:35:33,2:33:1180:2:72:0,-5.50817,-101.48	0/0:137:137,0:137:4849:0:0:0,-41.2411,-436.409	0/0:59:59,0:59:2112:0:0:0,-17.7608,-190.349	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/0:30:30,0:30:1057:0:0:0,-9.0309,-95.439	0/0:51:51,0:51:1816:0:0:0,-15.3525,-163.721	0/1:50:10,40:10:360:40:1423:-85.2322,0,-17.6928	0/0:334:334,0:334:11932:0:0:0,-100.544,-1073.74	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.491	0/0:132:132,0:132:4723:0:0:0,-39.736,-425.227	0/1:45:35,10:35:1256:10:360:-10.5345,0,-99.7989	0/0:24:24,0:24:855:0:0:0,-7.22472,-77.2702	0/1:13:6,7:6:216:7:252:-17.3727,0,-15.8771	0/1:151:81,70:81:2883:70:2512:-122.872,0,-214.251	0/1:67:28,39:28:999:39:1400:-63.5244,0,-70.0555	0/1:46:16,30:16:559:30:1076:-62.6634,0,-36.7898	0/0:30:30,0:30:1053:0:0:0,-9.0309,-95.0786	0/0:49:46,3:46:1647:3:108:0,-10.0054,-143.773	0/1:48:14,34:14:496:34:1220:-58.1739,0,-30.5248	0/0:42:42,0:42:1492:0:0:0,-12.6433,-134.574	0/0:99:99,0:99:3504:0:0:0,-29.802,-315.571	0/1:158:68,90:68:2406:90:3220:-168.719,0,-169.003	0/0:82:82,0:82:2931:0:0:0,-24.6845,-264.024	0/1:161:70,91:70:2481:91:3276:-157.367,0,-175.077	0/0:189:188,1:188:6711:1:36:0,-53.2968,-600.463	0/1:51:17,34:17:604:34:1220:-67.5987,0,-39.3381	0/1:101:39,62:39:1378:62:2220:-120.228,0,-93.9128	0/0:98:98,0:98:3507:0:0:0,-29.5009,-315.81	0/1:436:358,78:358:12765:78:2804:-82.2198,0,-1017.42	0/1:436:337,99:337:11977:99:3556:-137.866,0,-944.965	0/1:95:25,70:25:891:70:2496:-134.789,0,-51.9109	0/0:130:130,0:130:4644:0:0:0,-39.1339,-418.103	0/0:144:144,0:144:5119:0:0:0,-43.3483,-460.839
chr03	28355717	.	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chr03	28377653	.	G	C	42274.8	PASS	AB=0.511738;ABP=8.82176;AC=49;AF=0.260638;AN=188;AO=2496;CIGAR=1X;DP=10990;DPB=10990;DPRA=0.884551;EPP=5423.01;EPPR=18430.1;GTI=1;LEN=1;MEANALT=1.07273;MQM=59.8313;MQMR=59.9913;NS=94;NUMALT=1;ODDS=0.254602;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=89344;QR=303426;RO=8486;RPL=0;RPP=5423.01;RPPR=18430.1;RPR=2496;RUN=1;SAF=2496;SAP=5423.01;SAR=0;SRF=8486;SRP=18430.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:27,28:27:972:28:996:-73.3982,0,-71.2413	0/1:192:109,82:109:3901:82:2944:-207.276,0,-293.425	0/1:198:105,93:105:3734:93:3340:-241.213,0,-276.655	0/0:329:329,0:329:11768:0:0:0,-99.0389,-1058.98	0/1:90:46,43:46:1637:43:1548:-112.462,0,-120.465	0/1:78:33,45:33:1173:45:1609:-121.619,0,-82.3952	0/1:178:45,133:45:1584:133:4780:-376.763,0,-89.2643	0/1:136:64,72:64:2296:72:2584:-191.869,0,-165.961	0/0:87:87,0:87:3100:0:0:0,-26.1896,-279.226	0/1:136:75,61:75:2665:61:2176:-155.166,0,-199.149	0/1:26:13,13:13:460:13:468:-34.6329,0,-33.9086	0/1:39:19,20:19:684:20:716:-53.0275,0,-50.1502	0/1:45:19,26:19:684:26:936:-71.0131,0,-48.3431	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:33:12,21:12:432:21:756:-58.4048,0,-29.2872	0/1:43:27,16:27:972:16:559:-37.6933,0,-74.8536	0/1:30:18,12:18:648:12:428:-29.8093,0,-49.621	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:27:18,9:18:644:9:324:-21.378,0,-50.1628	0/0:312:311,1:311:11080:1:36:0,-90.3231,-993.494	0/0:164:163,0:163:5856:0:0:0,-49.0679,-526.753	0/0:199:199,0:199:7140:0:0:0,-59.905,-641.294	0/1:101:57,44:57:2044:44:1576:-111.714,0,-153.828	0/1:207:93,114:93:3325:114:4084:-305.43,0,-237.153	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/1:454:238,216:238:8502:216:7717:-557.707,0,-628.511	0/0:278:278,0:278:9942:0:0:0,-83.6863,-894.695	0/1:15:6,9:6:216:9:324:-24.9904,0,-15.2751	0/0:407:407,0:407:14537:0:0:0,-122.519,-1308.07	0/1:239:117,122:117:4166:122:4353:-319.93,0,-303.175	0/0:213:213,0:213:7618:0:0:0,-64.1194,-685.654	0/0:7:6,0:6:216:0:0:0,-1.80618,-19.4307	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6206	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:117:117,0:117:4189:0:0:0,-35.2205,-377.19	0/1:331:166,165:166:5960:165:5894:-430.61,0,-436.864	0/1:23:8,15:8:288:15:540:-42.0082,0,-19.3437	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:245:124,121:124:4437:121:4321:-315.313,0,-325.747	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:190:189,0:189:6764:0:0:0,-56.8947,-608.474	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/0:151:151,0:151:5378:0:0:0,-45.4555,-484.151	0/0:236:236,0:236:8465:0:0:0,-71.0431,-761.847	0/0:289:289,0:289:10349:0:0:0,-86.9977,-931.33	0/0:175:175,0:175:6269:0:0:0,-52.6802,-564.302	0/0:178:178,0:178:6344:0:0:0,-53.5833,-571.047	0/0:252:252,0:252:9045:0:0:0,-75.8596,-814.022	0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6206	0/1:180:98,82:98:3508:82:2940:-210.645,0,-261.745	0/1:81:31,50:31:1116:50:1788:-136.819,0,-76.3683	0/1:33:25,8:25:881:8:288:-16.3334,0,-69.6719	0/0:156:156,0:156:5608:0:0:0,-46.9607,-504.839	0/1:108:42,66:42:1512:66:2364:-180.507,0,-103.863	0/0:4:4,0:4:129:0:0:0,-1.20412,-11.9277	0/1:17:13,4:13:468:4:144:-8.19611,0,-37.3421	0/1:102:57,45:57:2048:45:1616:-114.791,0,-153.887	0/1:91:37,54:37:1332:54:1940:-147.482,0,-92.7887	0/1:11:7,4:7:248:4:140:-9.63325,0,-19.3529	0/0:315:315,0:315:11202:0:0:0,-94.8244,-1008.07	0/0:297:295,2:295:10546:2:72:0,-82.5692,-942.216	0/0:53:53,0:53:1885:0:0:0,-15.9546,-169.927	0/0:114:113,1:113:4056:1:36:0,-30.7191,-361.628	0/0:215:210,5:210:7491:5:180:0,-48.1694,-657.679	0/1:149:44,105:44:1580:105:3748:-292.386,0,-97.6381	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:128:127,1:127:4514:1:36:0,-34.9336,-402.829	0/0:66:66,0:66:2357:0:0:0,-19.868,-212.387	0/1:43:19,24:19:684:24:852:-63.9039,0,-48.946	0/0:190:190,0:190:6782:0:0:0,-57.1957,-610.451	0/1:76:41,35:41:1431:35:1244:-89.1579,0,-106.201	0/1:196:95,101:95:3385:101:3628:-267.68,0,-245.863	0/1:215:101,112:101:3602:112:3987:-294.539,0,-259.904	0/1:152:88,64:88:3129:64:2300:-160.877,0,-236.079	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/1:16:6,10:6:216:10:360:-27.9278,0,-14.974	0/1:156:70,85:70:2520:85:3044:-227.17,0,-180.032	0/0:178:177,1:177:6328:1:36:0,-49.9851,-566.012	0/0:222:222,0:222:7961:0:0:0,-66.8287,-716.509	0/1:74:41,33:41:1460:33:1176:-83.8715,0,-109.42	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:41:18,23:18:648:23:828:-62.5019,0,-46.3097	0/0:72:72,0:72:2584:0:0:0,-21.6742,-232.809	0/1:23:16,7:16:576:7:252:-16.1053,0,-45.2513	0/1:39:16,23:16:576:23:820:-62.3744,0,-40.4348	0/1:41:18,23:18:648:23:824:-62.1411,0,-46.3097	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	0/1:37:18,19:18:648:19:684:-50.7522,0,-47.5138	0/1:21:5,16:5:180:16:576:-45.8534,0,-10.2304	0/0:158:158,0:158:5661:0:0:0,-47.5627,-509.607	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467
chr03	28377680	.	TCTTT	TCTTG,CCTTG	231452	PASS	AB=0.478477,0.515108;ABP=22.4529,12.5896;AC=139,49;AF=0.739362,0.260638;AN=188;AO=8291,2502;CIGAR=4M1X,1X3M1X;DP=10864;DPB=10864;DPRA=0,0.856622;EPP=17989.3,5436.03;EPPR=13.8677;GTI=2;LEN=1,5;MEANALT=2.25532,2.60714;MQM=59.9995,59.8597;MQMR=60;NS=94;NUMALT=2;ODDS=0.262306;PAIRED=0,0;PAIREDR=0;PAO=0,1;PQA=0,32;PQR=0;PRO=0;QA=296122,86511;QR=173;RO=5;RPL=8289,2502;RPP=17989.3,5436.03;RPPR=13.8677;RPR=2,0;RUN=1,1;SAF=8291,2502;SAP=18006.7,5436.03;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:55:0,27,28:0:0:27,28:963,965:-157.239,-78.7312,-70.6034,-78.8581,0,-70.4293	1/2:186:0,104,82:0:0:104,82:3732,2872:-538.44,-234.021,-202.714,-304.773,0,-280.088	1/2:195:0,100,95:0:0:100,95:3571,3309:-560.578,-269.436,-239.333,-291.495,0,-262.897	1/1:321:0,320,0:0:0:320,0:11440,0:-1029.21,-96.3296,0,-1029.21,-96.3296,-1029.21	1/2:91:0,46,45:0:0:46,45:1652,1585:-264.156,-129.39,-115.543,-135.121,0,-121.575	1/2:77:0,31,45:0:0:31,45:1112,1567:-218.276,-127.569,-118.238,-90.8545,0,-77.3081	1/2:178:0,44,134:0:0:44,134:1580,4594:-502.182,-373.291,-360.046,-129.246,0,-88.9082	1/2:136:0,64,72:0:0:64,72:2266,2471:-385.557,-200.969,-181.703,-184.936,0,-163.262	1/1:83:0,82,0:0:0:82,0:2937,0:-264.311,-24.6845,0,-264.311,-24.6845,-264.311	1/2:133:0,72,61:0:0:72,61:2583,2098:-381.418,-170.725,-149.05,-211.044,0,-192.681	1/2:26:0,13,13:0:0:13,13:440,443:-71.9515,-36.2825,-32.3691,-36.0085,0,-32.0952	1/2:39:0,18,21:0:0:18,21:640,725:-111.407,-59.2473,-53.8288,-52.5108,0,-46.1891	1/2:44:0,19,25:0:0:19,25:654,860:-123.303,-70.1867,-64.4671,-53.4604,0,-45.9347	1/1:33:0,33,0:0:0:33,0:1168,0:-105.427,-9.93399,0,-105.427,-9.93399,-105.427	1/2:33:0,12,21:0:0:12,21:428,734:-94.9306,-60.0381,-56.4257,-35.2464,0,-28.9248	1/2:43:0,27,16:0:0:27,16:960,542:-122.527,-44.2833,-36.1555,-78.5885,0,-73.772	1/2:31:0,18,13:0:0:18,13:644,445:-88.9642,-36.4407,-31.0222,-52.8721,0,-48.9587	1/1:32:0,32,0:0:0:32,0:1139,0:-102.818,-9.63296,0,-102.818,-9.63296,-102.818	1/2:27:0,18,9:0:0:18,9:630,293:-75.2512,-23.9787,-18.5602,-51.6061,0,-48.8968	1/1:308:0,307,0:0:0:307,0:10962,0:-986.255,-92.4162,0,-986.255,-92.4162,-986.255	1/1:163:0,163,0:0:0:163,0:5821,0:-524.003,-49.0679,0,-524.003,-49.0679,-524.003	1/1:193:0,192,0:0:0:192,0:6862,0:-617.398,-57.7978,0,-617.398,-57.7978,-617.398	1/2:102:0,58,42:0:0:58,42:2077,1476:-289.538,-120.152,-102.692,-169.404,0,-156.761	1/2:208:0,93,115:0:0:93,115:3319,3977:-594.084,-323.503,-295.507,-270.933,0,-236.314	1/1:45:0,44,0:0:0:44,0:1557,0:-140.06,-13.2453,0,-140.06,-13.2453,-140.06	1/2:447:0,227,215:0:0:227,215:8124,7393:-1262.82,-600.326,-531.992,-662.55,0,-597.829	1/1:273:0,271,0:0:0:271,0:9716,0:-874.124,-81.5791,0,-874.124,-81.5791,-874.124	1/2:16:0,6,10:0:0:6,10:208,345:-45.2784,-28.3714,-26.5652,-17.2529,0,-14.2426	1/1:400:0,396,0:0:0:396,0:14142,0:-1272.24,-119.208,0,-1272.24,-119.208,-1272.24	1/2:241:0,115,124:0:0:115,124:4093,4302:-683.371,-349.786,-315.167,-333.704,0,-296.376	1/1:207:0,205,0:0:0:205,0:7345,0:-660.783,-61.7112,0,-660.783,-61.7112,-660.783	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/2:9:0,5,4:0:0:5,4:180,139:-26.3421,-11.6481,-10.1429,-15.0469,0,-13.8428	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:12:0,12,0:0:0:12,0:419,0:-38.0427,-3.61236,0,-38.0427,-3.61236,-38.0427	1/1:116:0,115,0:0:0:115,0:4100,0:-368.915,-34.6185,0,-368.915,-34.6185,-368.915	1/2:326:0,161,164:0:0:161,164:5771,5651:-929.746,-459.06,-410.595,-470.776,0,-421.407	1/2:23:0,8,15:0:0:8,15:288,518:-65.9296,-42.4251,-40.0169,-23.8592,0,-19.3437	1/2:6:0,5,1:0:0:5,1:180,36:-17.9843,-3.29724,-1.79209,-15.0469,0,-14.7459	1/2:248:0,121,124:0:0:121,124:4344,4265:-700.752,-346.394,-309.969,-354.392,0,-317.064	1/1:15:0,15,0:0:0:15,0:540,0:-48.9365,-4.51545,0,-48.9365,-4.51545,-48.9365	1/1:185:0,184,0:0:0:184,0:6560,0:-590.211,-55.3895,0,-590.211,-55.3895,-590.211	1/1:40:0,40,0:0:0:40,0:1421,0:-128.185,-12.0412,0,-128.185,-12.0412,-128.185	1/1:34:0,34,0:0:0:34,0:1175,0:-106.048,-10.235,0,-106.048,-10.235,-106.048	1/1:151:0,150,0:0:0:150,0:5343,0:-480.725,-45.1545,0,-480.725,-45.1545,-480.725	1/1:237:1,233,0:1:36:233,0:8340,0:-747.033,-67.1934,0,-747.334,-70.14,-750.272	1/1:282:1,278,1:1:36:278,1:9955,31:-892.321,-80.7373,0,-890.134,-81.2028,-892.77	1/1:171:1,170,0:1:30:170,0:6074,0:-543.763,-48.4766,0,-544.064,-51.1751,-546.462	1/1:176:0,176,0:0:0:176,0:6273,0:-564.664,-52.9813,0,-564.664,-52.9813,-564.664	1/1:250:0,250,0:0:0:250,0:8956,0:-806.017,-75.2575,0,-806.017,-75.2575,-806.017	1/1:10:0,10,0:0:0:10,0:360,0:-32.7443,-3.0103,0,-32.7443,-3.0103,-32.7443	1/2:181:0,96,82:0:0:96,82:3431,2821:-508.84,-229.086,-200.187,-279.748,0,-255.063	1/2:81:0,32,49:0:0:32,49:1148,1711:-233.167,-139.525,-129.892,-93.9969,0,-79.2464	1/2:32:0,24,8:0:0:24,8:864,276:-93.2757,-22.7664,-15.5417,-70.8578,0,-68.4496	1/1:154:0,151,0:0:0:151,0:5405,0:-486.285,-45.4555,0,-486.285,-45.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chr03	28491844	.	A	G	162565	PASS	AB=0.484761;ABP=12.7394;AC=137;AF=0.728723;AN=188;AO=7707;CIGAR=1X;DP=10211;DPB=10211;DPRA=0;EPP=16625.8;EPPR=5409.98;GTI=1;LEN=1;MEANALT=1.09574;MQM=50.3468;MQMR=59.5878;NS=94;NUMALT=1;ODDS=2.57399;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276030;QR=89438;RO=2494;RPL=7694;RPP=16625.8;RPPR=5409.98;RPR=13;RUN=1;SAF=0;SAP=16738.5;SAR=7707;SRF=0;SRP=5418.66;SRR=2494;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:86:39,47:39:1400:47:1688:-125.703,0,-100.409	0/1:77:29,48:29:1040:48:1728:-132.329,0,-70.7351	0/1:188:94,94:94:3376:94:3341:-243.479,0,-247.433	1/1:324:1,323:1:36:323:11563:-1029.7,-93.9354,0	0/1:60:41,19:41:1461:19:680:-43.3418,0,-113.695	0/1:42:23,19:23:824:19:684:-48.9728,0,-61.8294	0/1:161:91,70:91:3264:70:2500:-174.815,0,-245.422	0/1:177:85,92:85:3022:92:3288:-240.402,0,-218.504	0/1:111:57,54:57:2040:54:1944:-141.407,0,-150.451	0/1:81:34,47:34:1224:47:1680:-125.651,0,-85.9768	0/1:47:22,25:22:792:25:900:-66.7024,0,-57.4502	0/1:125:60,65:60:2144:65:2328:-171.541,0,-155.557	0/1:108:54,54:54:1944:54:1940:-141.826,0,-142.703	1/1:45:0,45:0:0:45:1608:-144.132,-13.5464,0	0/1:65:34,31:34:1220:31:1116:-80.6318,0,-90.4969	0/1:62:25,37:25:896:37:1319:-100.048,0,-62.2858	0/1:24:9,15:9:324:15:540:-41.6186,0,-22.2704	1/1:38:0,38:0:0:38:1364:-122.482,-11.4391,0	0/1:28:14,14:14:504:14:504:-36.8467,0,-37.263	1/1:246:1,245:1:36:245:8800:-781.219,-70.4669,0	1/1:169:0,168:0:0:168:6006:-538.619,-50.573,0	1/1:144:0,144:0:0:144:5164:-459.962,-43.3483,0	0/1:113:75,38:75:2696:38:1356:-87.5678,0,-208.832	0/1:87:47,40:47:1684:40:1436:-103.101,0,-125.65	1/1:111:0,111:0:0:111:3988:-357.598,-33.4143,0	0/1:303:143,160:143:5136:160:5744:-421.177,0,-370.332	1/1:287:0,286:0:0:286:10246:-918.302,-86.0946,0	0/1:30:8,22:8:288:22:792:-62.2937,0,-17.2365	1/1:317:0,317:0:0:317:11329:-1009.37,-95.4265,0	0/1:124:69,55:69:2476:55:1968:-139.038,0,-185.68	1/1:100:0,100:0:0:100:3572:-318.802,-30.103,0	1/1:23:0,23:0:0:23:824:-74.3464,-6.92369,0	0/1:22:13,9:13:468:9:316:-22.1075,0,-35.837	1/1:4:0,4:0:0:4:144:-13.2883,-1.20412,0	1/1:5:0,5:0:0:5:172:-15.7825,-1.50515,0	1/1:23:0,23:0:0:23:820:-73.944,-6.92369,0	1/1:189:0,189:0:0:189:6769:-603.485,-56.8947,0	0/1:187:80,107:80:2856:107:3824:-287.058,0,-200.957	0/1:68:35,32:35:1256:32:1148:-82.4042,0,-92.9622	0/1:7:2,5:2:72:5:180:-14.4133,0,-4.72951	0/1:211:101,110:101:3620:110:3940:-290.058,0,-262.436	1/1:37:0,37:0:0:37:1316:-118.422,-11.1381,0	1/1:272:0,272:0:0:272:9732:-872.485,-81.8802,0	1/1:47:0,47:0:0:47:1692:-151.668,-14.1484,0	1/1:58:0,58:0:0:58:2084:-186.836,-17.4597,0	1/1:125:0,125:0:0:125:4474:-396.993,-37.6288,0	1/1:162:0,161:0:0:161:5776:-518.03,-48.4658,0	1/1:190:0,190:0:0:190:6828:-610.603,-57.1957,0	1/1:116:0,116:0:0:116:4148:-370.432,-34.9195,0	1/1:89:1,88:1:36:88:3152:-278.346,-23.1934,0	1/1:186:0,186:0:0:186:6676:-596.246,-55.9916,0	1/1:5:0,5:0:0:5:180:-16.474,-1.50515,0	0/1:195:98,97:98:3516:97:3472:-252.901,0,-257.852	0/1:73:46,27:46:1648:27:964:-64.2264,0,-126.566	0/1:15:12,3:12:432:3:108:-5.54053,0,-34.7057	1/1:194:0,194:0:0:194:6947:-622.872,-58.3998,0	0/1:54:27,27:27:972:27:956:-69.6619,0,-71.4958	1/1:10:0,10:0:0:10:360:-32.2204,-3.0103,0	0/1:28:17,11:17:612:11:392:-26.9562,0,-46.9846	0/1:82:42,40:42:1508:40:1436:-103.375,0,-111.33	0/1:95:43,52:43:1548:52:1872:-138.101,0,-110.85	0/1:11:5,6:5:180:6:216:-16.3719,0,-13.2407	1/1:197:1,196:1:36:196:7032:-622.353,-55.7046,0	1/1:208:4,203:4:144:203:7276:-635.743,-49.3579,0	1/1:70:0,70:0:0:70:2487:-223.644,-21.0721,0	1/1:96:0,94:0:0:94:3368:-298.743,-28.2968,0	1/1:142:1,141:1:36:141:5060:-447.652,-39.148,0	0/1:180:115,65:115:4128:65:2332:-154.684,0,-317.491	1/1:58:1,57:1:36:57:2048:-180.641,-13.8615,0	0/1:99:54,45:54:1940:45:1620:-115.858,0,-145.074	1/1:39:0,39:0:0:39:1400:-125.084,-11.7402,0	0/1:44:22,22:22:788:22:792:-56.5583,0,-57.9995	1/1:164:0,163:0:0:163:5844:-523.239,-49.0679,0	0/1:153:79,74:79:2828:74:2664:-193.319,0,-208.4	0/1:157:71,86:71:2544:86:3065:-227.885,0,-181.938	0/1:241:119,121:119:4264:121:4348:-315.391,0,-311.116	0/1:115:61,54:61:2184:54:1932:-138.703,0,-162.196	1/1:94:0,93:0:0:93:3312:-296.785,-27.9958,0	0/1:26:9,17:9:324:17:608:-47.1234,0,-21.6791	0/1:131:74,57:74:2656:57:2046:-144.307,0,-199.832	1/1:161:1,160:1:36:160:5736:-510.918,-44.8676,0	1/1:210:0,210:0:0:210:7507:-669.6,-63.2163,0	0/1:60:31,29:31:1112:29:1027:-74.1695,0,-82.3295	1/1:77:0,77:0:0:77:2748:-244.945,-23.1793,0	0/1:47:22,25:22:780:25:888:-65.6906,0,-56.3388	1/1:138:0,138:0:0:138:4948:-442.278,-41.5421,0	0/1:31:21,10:21:756:10:356:-22.9683,0,-59.0353	0/1:80:50,30:50:1791:30:1067:-71.8186,0,-137.389	0/1:80:42,38:42:1512:38:1364:-98.5795,0,-112.282	0/1:48:22,26:22:788:26:928:-69.1747,0,-56.7954	0/1:104:61,43:61:2192:43:1540:-106.916,0,-165.923	0/1:80:56,24:56:2012:24:856:-52.5344,0,-157.254	1/1:118:0,118:0:0:118:4215:-376.932,-35.5215,0	1/1:100:0,100:0:0:100:3582:-319.722,-30.103,0
chr03	28818382	.	A	G	191538	PASS	AB=0.512;ABP=10.2022;AC=134;AF=0.712766;AN=188;AO=9071;CIGAR=1X;DP=11884;DPB=11884;DPRA=0;EPP=19700.4;EPPR=6102.68;GTI=2;LEN=1;MEANALT=1.04255;MQM=59.9804;MQMR=59.9836;NS=94;NUMALT=1;ODDS=2.70142;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=324131;QR=100641;RO=2809;RPL=9071;RPP=19700.4;RPPR=6102.68;RPR=0;RUN=1;SAF=0;SAP=19700.4;SAR=9071;SRF=0;SRP=6102.68;SRR=2809;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:30,27:30:1072:27:943:-68.0245,0,-79.6337	0/1:276:112,164:112:4020:164:5867:-445.048,0,-278.903	0/1:194:105,89:105:3745:89:3169:-227.034,0,-278.85	1/1:242:1,241:1:36:241:8624:-772.553,-69.251,0	0/1:79:41,38:41:1468:38:1349:-97.9223,0,-108.635	0/1:51:30,21:30:1068:21:748:-52.2928,0,-81.0795	0/1:228:113,115:113:4026:115:4116:-301.99,0,-293.892	0/1:212:95,117:95:3404:117:4174:-312.021,0,-242.734	0/1:93:47,46:47:1669:46:1635:-119.442,0,-122.5	0/1:149:87,62:87:3128:62:2219:-155.12,0,-236.892	0/1:71:30,41:30:1080:41:1468:-111.043,0,-76.1401	0/1:75:43,32:43:1544:32:1144:-80.6923,0,-116.676	0/1:77:26,51:26:936:51:1828:-141.622,0,-61.3802	1/1:104:0,104:0:0:104:3733:-336.169,-31.3071,0	0/1:95:47,48:47:1692:48:1724:-126.848,0,-123.969	0/1:45:18,27:18:644:27:968:-73.891,0,-44.7442	0/1:75:29,45:29:1040:45:1607:-122.429,0,-71.4232	1/1:64:0,64:0:0:64:2253:-203.02,-19.2659,0	0/1:55:22,33:22:788:33:1180:-89.9514,0,-54.6881	1/1:366:0,366:0:0:366:13079:-1176.92,-110.177,0	1/1:175:0,175:0:0:175:6244:-562.058,-52.6803,0	1/1:132:0,132:0:0:132:4736:-426.397,-39.736,0	0/1:86:42,44:42:1512:44:1562:-114.982,0,-110.486	0/1:180:85,95:85:3037:95:3396:-251.67,0,-219.373	1/1:93:0,93:0:0:93:3320:-299.019,-27.9958,0	0/1:382:209,173:209:7479:173:6177:-441.035,0,-558.05	1/1:371:0,371:0:0:371:13242:-1191.51,-111.682,0	0/1:36:21,15:21:748:15:536:-37.7377,0,-56.8082	1/1:328:0,328:0:0:328:11724:-1055.01,-98.7378,0	0/1:146:76,70:76:2732:70:2504:-181.662,0,-202.172	1/1:166:0,166:0:0:166:5936:-534.349,-49.971,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:8:4,4:4:144:4:140:-10.5363,0,-10.9054	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:22:0,22:0:0:22:772:-69.8001,-6.62266,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:194:0,194:0:0:194:6923:-623.136,-58.3998,0	0/1:166:91,75:91:3268:75:2664:-190.036,0,-244.369	0/1:90:39,51:39:1404:51:1828:-137.708,0,-99.5666	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/1:187:87,100:87:3112:100:3576:-265.755,0,-224.015	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	1/1:210:0,210:0:0:210:7470:-672.346,-63.2163,0	1/1:67:0,66:0:0:66:2372:-213.378,-19.868,0	1/1:69:0,69:0:0:69:2459:-221.562,-20.7711,0	1/1:74:0,74:0:0:74:2650:-238.746,-22.2762,0	0/1:169:87,82:87:3128:82:2920:-212.162,0,-230.871	1/1:319:0,319:0:0:319:11410:-1026.77,-96.0286,0	1/1:214:0,214:0:0:214:7637:-687.368,-64.4204,0	1/1:228:0,228:0:0:228:8134:-732.075,-68.6348,0	0/1:209:100,109:100:3565:109:3879:-286.391,0,-258.142	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:223:92,131:92:3304:131:4664:-351.936,0,-230.448	0/1:42:26,16:26:917:16:568:-38.8086,0,-70.2013	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	1/1:198:0,197:0:0:197:7027:-632.26,-59.3029,0	0/1:49:23,26:23:824:26:936:-69.809,0,-59.7328	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:34:20,14:20:720:14:504:-35.4631,0,-54.8938	0/1:84:29,55:29:1036:55:1976:-152.828,0,-68.2674	0/1:100:53,47:53:1900:47:1680:-121.383,0,-141.175	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	1/1:177:0,176:0:0:176:6287:-565.706,-52.9813,0	1/1:265:1,264:1:36:264:9448:-846.68,-76.1747,0	1/1:104:0,104:0:0:104:3727:-335.63,-31.3071,0	1/1:51:0,51:0:0:51:1824:-164.441,-15.3525,0	1/1:315:1,314:1:36:314:11185:-1002.94,-91.2262,0	0/1:119:67,52:67:2396:52:1868:-132.577,0,-180.075	1/1:40:0,40:0:0:40:1423:-128.367,-12.0412,0	0/1:127:69,58:69:2480:58:2080:-149.239,0,-185.222	1/1:111:0,111:0:0:111:3960:-356.589,-33.4143,0	0/1:28:9,19:9:324:19:676:-52.7392,0,-21.077	1/1:159:0,159:0:0:159:5691:-512.308,-47.8638,0	0/1:109:52,57:52:1872:57:2048:-151.779,0,-135.947	0/1:216:101,115:101:3595:115:4112:-305.243,0,-258.735	0/1:216:92,124:92:3296:124:4456:-336.186,0,-231.837	0/1:153:83,70:83:2984:70:2508:-179.915,0,-222.734	1/1:119:0,119:0:0:119:4256:-383.219,-35.8226,0	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	0/1:107:62,45:62:2224:45:1608:-112.8,0,-168.214	1/1:195:0,195:0:0:195:6965:-626.915,-58.7009,0	1/1:398:0,398:0:0:398:14235:-1280.91,-119.81,0	0/1:128:60,68:60:2160:68:2440:-181.323,0,-156.135	1/1:82:0,82:0:0:82:2952:-265.913,-24.6845,0	0/1:112:47,65:47:1688:65:2323:-175.614,0,-118.492	1/1:145:1,144:1:36:144:5168:-461.661,-40.0511,0	0/1:54:34,20:34:1220:20:720:-48.8732,0,-93.8512	0/1:76:28,48:28:1004:48:1713:-131.576,0,-67.7976	0/1:73:37,36:37:1328:36:1296:-94.9687,0,-97.847	0/1:35:9,26:9:324:26:936:-74.0234,0,-18.9698	0/1:67:26,41:26:936:41:1452:-110.805,0,-64.3905	0/1:65:44,21:44:1576:21:752:-48.4393,0,-122.565	1/1:165:0,165:0:0:165:5880:-529.314,-49.67,0	1/1:123:0,123:0:0:123:4416:-397.611,-37.0267,0
chr03	28933801	.	C	T	108135	PASS	AB=0.521288;ABP=38.3279;AC=53;AF=0.281915;AN=188;AO=4696;CIGAR=1X;DP=17457;DPB=17457;DPRA=0.950952;EPP=10191.6;EPPR=27635;GTI=1;LEN=1;MEANALT=1.04918;MQM=59.3901;MQMR=59.9821;NS=94;NUMALT=1;ODDS=6.97687;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=167324;QR=449456;RO=12753;RPL=2317;RPP=4.7878;RPPR=216.218;RPR=2379;RUN=1;SAF=2316;SAP=4.90433;SAR=2380;SRF=5812;SRP=220.045;SRR=6941;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:163:81,82:81:2878:82:2892:-211.44,0,-210.189	0/1:198:99,99:99:3506:99:3532:-258.256,0,-256.148	0/1:290:136,154:136:4823:154:5511:-408.495,0,-346.928	0/0:465:464,0:464:16381:0:0:0,-139.678,-1473.61	0/1:200:106,94:106:3726:94:3353:-241.714,0,-275.337	0/1:80:41,39:41:1472:39:1396:-101.486,0,-108.694	0/1:138:62,76:62:2200:76:2702:-201.881,0,-156.724	0/1:387:194,193:194:6865:193:6848:-499.718,0,-501.424	0/1:342:154,188:154:5430:188:6670:-497.017,0,-385.88	0/1:204:105,99:105:3718:99:3520:-255.574,0,-273.406	0/1:105:50,55:50:1748:55:1976:-146.459,0,-125.993	0/1:285:146,139:146:5063:139:4955:-359.884,0,-370.035	0/1:184:91,93:91:3187:93:3308:-242.49,0,-231.664	0/0:122:122,0:122:4206:0:0:0,-36.7257,-378.729	0/1:175:86,89:86:2956:89:3196:-235.158,0,-213.597	0/1:147:73,74:73:2513:74:2634:-192.996,0,-182.169	0/1:88:40,48:40:1392:48:1707:-127.423,0,-99.0836	0/0:83:83,0:83:2897:0:0:0,-24.9855,-260.863	0/1:75:33,42:33:1154:42:1487:-111.547,0,-81.5875	0/0:272:271,1:271:9595:1:36:0,-78.2819,-859.911	0/0:427:427,0:427:15097:0:0:0,-128.54,-1358.47	0/0:131:131,0:131:4654:0:0:0,-39.4349,-419.025	0/1:237:84,153:84:2979:153:5460:-420.125,0,-196.893	0/1:152:63,89:63:2242:89:3152:-238.093,0,-156.286	0/0:186:186,0:186:6597:0:0:0,-55.9916,-593.814	0/1:467:221,246:221:7850:246:8776:-648.416,0,-565.951	0/0:464:461,3:461:16331:3:108:0,-129.603,-1459.4	0/1:76:39,37:39:1335:37:1323:-96.4926,0,-97.566	0/0:546:546,0:546:19279:0:0:0,-164.362,-1734.68	0/1:192:96,96:96:3366:96:3427:-250.379,0,-245.355	0/0:202:201,0:201:7080:0:0:0,-60.507,-636.908	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/1:31:10,21:10:360:21:756:-59.0353,0,-23.4124	0/0:20:20,0:20:701:0:0:0,-6.0206,-63.4117	0/0:16:16,0:16:557:0:0:0,-4.81648,-50.4556	0/0:16:16,0:16:567:0:0:0,-4.81648,-51.3607	0/0:375:375,0:375:13103:0:0:0,-112.886,-1179.08	0/1:127:55,72:55:1959:72:2584:-194.51,0,-138.354	0/1:105:62,43:62:2144:43:1523:-105.658,0,-161.619	0/1:10:9,1:9:298:1:36:-0.587975,0,-24.1313	0/1:308:164,144:164:5819:144:5141:-370.107,0,-431.109	0/0:68:68,0:68:2363:0:0:0,-20.47,-212.928	0/0:255:255,0:255:8986:0:0:0,-76.7626,-808.721	0/0:134:134,0:134:4682:0:0:0,-40.338,-421.547	0/0:138:138,0:138:4815:0:0:0,-41.5421,-433.514	0/0:127:127,0:127:4490:0:0:0,-38.2308,-404.269	0/1:260:125,135:125:4422:135:4811:-354.526,0,-319.886	0/0:324:324,0:324:11493:0:0:0,-97.5337,-1034.25	0/0:165:165,0:165:5862:0:0:0,-49.6699,-527.696	0/0:205:205,0:205:7256:0:0:0,-61.7111,-653.101	0/1:226:91,135:91:3200:135:4799:-363.368,0,-220.189	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:191:88,103:88:3120:103:3676:-273.416,0,-223.529	0/1:111:56,55:56:1964:55:1950:-142.301,0,-143.616	0/1:8:4,4:4:144:4:140:-10.5363,0,-10.9054	0/0:262:262,0:262:9287:0:0:0,-78.8699,-835.798	0/1:155:71,84:71:2524:84:2976:-221.374,0,-180.722	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:25:9,16:9:320:16:576:-44.6432,0,-21.6166	0/1:239:116,121:116:4111:121:4330:-317.728,0,-298.472	0/1:160:89,71:89:3098:71:2521:-178.91,0,-230.885	0/1:17:8,9:8:279:9:324:-24.3883,0,-20.33	0/0:239:238,1:238:8436:1:36:0,-68.3489,-755.653	0/0:261:255,6:255:9020:6:216:0,-58.7783,-791.996	0/0:138:136,2:136:4781:2:72:0,-34.7054,-423.61	0/0:210:210,0:210:7396:0:0:0,-63.2163,-665.683	0/0:268:265,3:265:9381:3:108:0,-70.6009,-834.189	0/1:261:80,181:80:2831:181:6462:-501.512,0,-176.459	0/0:125:125,0:125:4349:0:0:0,-37.6287,-391.591	0/1:107:51,56:51:1812:56:1991:-147.113,0,-131.143	0/0:116:116,0:116:3981:0:0:0,-34.9195,-358.473	0/1:32:22,10:22:776:10:360:-23.1113,0,-60.5292	0/0:169:169,0:169:5954:0:0:0,-50.8741,-535.937	0/1:138:69,69:69:2442:69:2450:-179.115,0,-178.493	0/1:397:203,193:203:7182:193:6872:-498.683,0,-526.873	0/1:218:112,106:112:3989:106:3795:-276.087,0,-293.575	0/1:340:189,151:189:6670:151:5396:-383.109,0,-498.033	0/0:210:209,1:209:7378:1:36:0,-59.618,-660.477	0/1:20:10,10:10:352:10:360:-26.7016,0,-25.9976	0/1:247:107,140:107:3818:140:4997:-375.445,0,-269.463	0/0:311:311,0:311:10953:0:0:0,-93.6203,-985.68	0/0:488:487,0:487:17305:0:0:0,-146.602,-1556.82	0/1:136:63,73:63:2193:73:2581:-191.57,0,-156.691	0/0:152:152,0:152:5334:0:0:0,-45.7566,-480.147	0/1:105:53,50:53:1841:50:1784:-129.439,0,-134.6	0/0:303:301,2:301:10517:2:72:0,-84.3754,-939.636	0/1:63:22,41:22:763:41:1472:-113.763,0,-50.0237	0/1:161:81,80:81:2765:80:2829:-206.365,0,-200.571	0/1:158:86,72:86:3008:72:2549:-182.036,0,-223.391	0/1:111:47,64:47:1647:64:2296:-173.437,0,-115.103	0/1:160:81,79:81:2817:79:2797:-203.368,0,-205.608	0/1:160:57,103:57:1951:103:3681:-283.292,0,-127.696	0/0:170:170,0:170:6047:0:0:0,-51.1751,-544.338	0/0:271:271,0:271:9499:0:0:0,-81.5791,-854.114
chr03	28933810	.	CGC	CGT,TGT	397262	PASS	AB=0.6081,0.388326;ABP=684.685,730.499;AC=135,53;AF=0.718085,0.281915;AN=188;AO=12214,2622;CIGAR=2M1X,1X1M1X;DP=14883;DPB=14896.7;DPRA=0,0.784022;EPP=132.066,3795.72;EPPR=14.7363;GTI=6;LEN=1,3;MEANALT=1.93617,2.3;MQM=59.9836,59.3368;MQMR=60;NS=94;NUMALT=2;ODDS=0.446136;PAIRED=0,0;PAIREDR=0;PAO=0,40;PQA=0,1319;PQR=0;PRO=0;QA=432188,91318;QR=535;RO=15;RPL=12114,2569;RPP=25663.9,5245.56;RPPR=35.5824;RPR=100,53;RUN=1,1;SAF=5581,188;SAP=199.766,4180.75;SAR=6633,2434;SRF=3;SRP=14.7363;SRR=12;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:134:0,78,56:0:0:78,56:2757,1940:-382.19,-157.648,-134.168,-224.531,0,-207.674	1/2:144:0,94,50:0:0:94,50:3330,1721:-410.831,-139.558,-111.261,-271.273,0,-256.222	1/2:201:0,131,70:0:0:131,70:4634,2454:-577.454,-200.016,-160.581,-377.79,0,-356.718	1/1:447:0,446,0:0:0:446,0:15805,0:-1421.8,-134.259,0,-1421.8,-134.259,-1421.8	1/2:174:0,105,69:0:0:105,69:3751,2432:-503.792,-197.965,-166.356,-305.822,0,-285.051	1/2:49:0,38,11:0:0:38,11:1352,394:-142.461,-32.2678,-20.8287,-110.327,0,-107.016	1/2:92:0,59,33:0:0:59,33:2092,1174:-266.468,-96.0334,-78.2726,-170.789,0,-160.855	1/2:272:0,187,85:0:0:187,85:6656,2931:-780.53,-238.047,-181.754,-542.545,0,-516.957	1/2:273:0,147,126:0:0:147,126:5204,4384:-780.228,-356.328,-312.076,-423.891,0,-385.961	1/2:172:0,96,75:0:0:96,75:3383,2614:-488.006,-212.572,-183.674,-275.424,0,-252.847	1/2:74:0,50,24:0:0:50,24:1749,850:-211.881,-69.5927,-54.5412,-142.64,0,-135.416	1/2:199:1,138,60:1:36:138,60:4916,2104:-568.637,-168.238,-129.633,-397.768,0,-382.643	1/2:131:0,86,44:0:0:86,44:3068,1533:-374.763,-124.654,-98.7652,-250.102,0,-236.857	1/1:125:0,125,0:0:0:125,0:4453,0:-400.941,-37.6288,0,-400.941,-37.6288,-400.941	1/2:124:0,83,40:0:0:83,40:2954,1415:-355.997,-115.243,-90.2579,-240.748,0,-228.707	1/2:100:0,71,28:0:0:71,28:2507,992:-284.973,-80.8157,-59.4426,-204.17,0,-195.741	1/2:60:0,40,19:0:0:40,19:1424,650:-168.809,-52.7404,-40.6992,-116.057,0,-110.337	1/1:79:0,79,0:0:0:79,0:2809,0:-253.045,-23.7814,0,-253.045,-23.7814,-253.045	1/2:42:0,34,8:0:0:34,8:1208,280:-121.211,-22.7718,-12.5368,-98.4314,0,-96.0231	1/1:252:2,249,1:2:70:249,1:8802,36:-785.525,-69.2677,0,-783.189,-72.0157,-788.584	1/1:410:1,409,0:1:36:409,0:14418,0:-1293.79,-119.824,0,-1294.09,-123.121,-1297.03	1/1:124:0,124,0:0:0:124,0:4381,0:-394.465,-37.3277,0,-394.465,-37.3277,-394.465	1/2:147:0,79,67:0:0:79,67:2776,2298:-412.214,-186.534,-162.752,-225.667,0,-205.498	1/2:91:0,59,32:0:0:59,32:2091,1113:-261.157,-90.8083,-73.0476,-170.699,0,-161.066	1/1:179:0,179,0:0:0:179,0:6373,0:-573.663,-53.8844,0,-573.663,-53.8844,-573.663	1/2:457:1,203,252:1:36:203,252:7144,8779:-1291.39,-710.127,-651.955,-578.673,0,-505.751	1/1:447:0,445,1:0:0:445,1:15699,36:-1412.27,-133.958,0,-1409.33,-131.021,-1409.03	1/2:54:0,36,18:0:0:36,18:1266,619:-153.31,-50.2534,-39.4163,-103.044,0,-97.6251	1/1:521:1,520,0:1:36:520,0:18425,0:-1654.26,-153.238,0,-1654.56,-156.536,-1657.5	1/2:134:0,93,41:0:0:93,41:3291,1401:-382.083,-114.014,-86.0184,-268.414,0,-256.072	1/1:199:1,198,0:1:36:198,0:7006,0:-626.925,-56.3067,0,-627.226,-59.6039,-630.164	1/1:23:0,23,0:0:0:23,0:820,0:-74.1225,-6.92369,0,-74.1225,-6.92369,-74.1225	1/2:23:0,11,12:0:0:11,12:388,430:-67.0185,-35.4277,-32.1164,-31.946,0,-28.3337	1/1:20:0,20,0:0:0:20,0:696,0:-62.9624,-6.0206,0,-62.9624,-6.0206,-62.9624	1/1:16:0,16,0:0:0:16,0:553,0:-50.094,-4.81648,0,-50.094,-4.81648,-50.094	1/1:16:0,16,0:0:0:16,0:568,0:-51.4519,-4.81648,0,-51.4519,-4.81648,-51.4519	1/1:369:1,368,0:1:36:368,0:13027,0:-1168.66,-107.482,0,-1168.96,-110.779,-1171.9	1/2:90:0,49,41:0:0:49,41:1712,1441:-256.898,-117.637,-102.886,-139.612,0,-127.27	1/2:75:0,58,17:0:0:58,17:2084,602:-219.092,-49.0703,-31.6106,-170.063,0,-164.945	1/2:9:0,8,1:0:0:8,1:288,36:-26.7966,-3.29724,-0.889005,-23.8592,0,-23.5581	1/2:223:0,153,70:0:0:153,70:5416,2435:-639.485,-198.322,-152.264,-441.513,0,-420.441	1/1:66:0,66,0:0:0:66,0:2338,0:-210.679,-19.868,0,-210.679,-19.868,-210.679	1/1:244:3,241,0:3:108:241,0:8497,0:-754.662,-63.3762,0,-755.565,-72.5482,-764.378	1/1:131:0,131,0:0:0:131,0:4657,0:-419.293,-39.4349,0,-419.293,-39.4349,-419.293	1/1:134:0,133,0:0:0:133,0:4661,0:-419.297,-40.037,0,-419.297,-40.037,-419.297	1/1:125:0,122,2:0:0:122,2:4277,61:-384.786,-36.7257,0,-379.901,-31.876,-379.299	1/2:205:0,125,78:0:0:125,78:4419,2715:-580.641,-220.734,-183.105,-359.911,0,-336.431	1/1:319:0,318,1:0:0:318,1:11292,28:-1015.89,-95.7275,0,-1013.67,-93.2288,-1013.37	1/1:153:0,150,0:0:0:150,0:5363,0:-482.514,-45.1545,0,-482.514,-45.1545,-482.514	1/1:196:0,195,0:0:0:195,0:6861,0:-617.203,-58.7009,0,-617.203,-58.7009,-617.203	1/2:222:0,88,133:0:0:88,133:3105,4637:-629.426,-376.591,-350.1,-252.905,0,-212.868	1/1:10:0,10,0:0:0:10,0:351,0:-31.9267,-3.0103,0,-31.9267,-3.0103,-31.9267	1/2:140:0,87,53:0:0:87,53:3089,1897:-406.684,-154.993,-128.803,-252.048,0,-236.094	1/2:107:0,52,55:0:0:52,55:1864,1916:-307.723,-155.691,-140.037,-152.026,0,-135.469	1/2:7:0,4,3:0:0:4,3:136,100:-19.4621,-8.42677,-7.22265,-11.3714,0,-10.4683	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chr03	28960480	.	T	C	314868	PASS	AB=0.523835;ABP=30.9588;AC=142;AF=0.755319;AN=188;AO=14455;CIGAR=1X;DP=17224;DPB=17224;DPRA=0;EPP=31391.6;EPPR=5994.1;GTI=1;LEN=1;MEANALT=1.09574;MQM=59.6899;MQMR=59.9253;NS=94;NUMALT=1;ODDS=7.17862;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=518015;QR=98586;RO=2759;RPL=0;RPP=31391.6;RPPR=5994.1;RPR=14455;RUN=1;SAF=14455;SAP=31391.6;SAR=0;SRF=2759;SRP=5994.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:27,28:27:949:28:1004:-74.1192,0,-69.1661	0/1:223:127,96:127:4560:96:3444:-243.021,0,-343.411	0/1:107:49,58:49:1760:58:2080:-155.238,0,-126.474	1/1:216:0,216:0:0:216:7735:-695.881,-65.0225,0	0/1:38:18,20:18:633:20:720:-53.6896,0,-45.8559	0/1:49:30,19:30:1057:19:680:-46.7672,0,-80.6885	0/1:131:80,51:80:2848:51:1817:-124.367,0,-217.124	0/1:151:74,77:74:2644:77:2756:-202.62,0,-192.751	0/1:111:51,59:51:1832:59:2120:-157.695,0,-131.795	0/1:54:35,19:35:1230:19:680:-45.2735,0,-94.658	0/1:200:33,167:33:1176:167:6004:-480.162,0,-45.9418	0/1:82:40,42:40:1417:42:1512:-111.682,0,-103.141	0/1:87:39,48:39:1377:48:1709:-127.871,0,-98.0371	1/1:59:0,59:0:0:59:2116:-190.696,-17.7608,0	0/1:60:35,25:35:1260:25:900:-63.251,0,-95.6437	0/1:115:72,42:72:2554:42:1508:-101.058,0,-195.43	0/1:59:31,28:31:1101:28:1000:-72.5464,0,-81.6376	1/1:68:0,68:0:0:68:2444:-220.19,-20.47,0	0/1:130:29,101:29:1036:101:3616:-286.5,0,-54.42	1/1:223:2,220:2:72:220:7873:-701.74,-60.3518,0	1/1:126:0,126:0:0:126:4520:-406.94,-37.9298,0	1/1:158:1,157:1:36:157:5592:-499.757,-43.9645,0	0/1:59:40,19:40:1432:19:684:-44.1272,0,-111.417	0/1:107:47,60:47:1676:60:2148:-161.373,0,-118.917	1/1:74:0,74:0:0:74:2648:-238.565,-22.2762,0	0/1:303:161,142:161:5753:142:5073:-365.486,0,-426.673	1/1:234:0,234:0:0:234:8356:-751.948,-70.441,0	0/1:40:22,18:22:792:18:648:-46.6107,0,-59.5645	1/1:310:0,310:0:0:310:11112:-999.933,-93.3193,0	0/1:175:91,84:91:3242:84:3012:-218.602,0,-239.318	1/1:132:0,132:0:0:132:4752:-427.83,-39.736,0	1/1:760:1,758:1:36:758:27137:-2437.12,-225.243,0	1/1:351:8,343:8:288:343:12308:-1081.17,-79.3941,0	1/1:679:2,677:2:72:677:24288:-2178.08,-197.563,0	1/1:1000:0,999:0:0:999:35786:-3217.57,-300.729,0	1/1:805:1,804:1:36:804:28811:-2585.52,-238.731,0	1/1:231:0,231:0:0:231:8294:-746.42,-69.5379,0	0/1:256:143,113:143:5105:113:4044:-287.075,0,-382.529	0/1:274:46,228:46:1656:228:8173:-652.744,0,-66.8462	1/1:187:3,184:3:108:184:6581:-582.038,-46.2174,0	0/1:136:70,66:70:2497:66:2372:-172.785,0,-184.041	1/1:240:0,240:0:0:240:8605:-774.375,-72.2472,0	1/1:143:0,143:0:0:143:5108:-459.858,-43.0473,0	1/1:59:0,59:0:0:59:2116:-190.704,-17.7608,0	1/1:54:0,54:0:0:54:1940:-174.84,-16.2556,0	1/1:85:0,85:0:0:85:3052:-274.907,-25.5876,0	0/1:137:83,54:83:2958:54:1944:-133.987,0,-225.209	1/1:116:0,116:0:0:116:4164:-374.908,-34.9195,0	1/1:129:0,129:0:0:129:4613:-415.326,-38.8329,0	1/1:203:0,203:0:0:203:7269:-654.095,-61.1091,0	0/1:149:92,57:92:3273:57:2052:-140.074,0,-249.935	1/1:650:0,650:0:0:650:23322:-2098.24,-195.67,0	0/1:127:72,55:72:2569:55:1972:-138.459,0,-193.227	0/1:54:25,29:25:900:29:1036:-77.2983,0,-65.0654	1/1:395:5,390:5:180:390:13969:-1240.21,-102.355,0	1/1:123:0,122:0:0:122:4376:-393.644,-36.7257,0	0/1:35:16,19:16:572:19:676:-50.5445,0,-41.2774	1/1:488:0,486:0:0:486:17369:-1562.05,-146.301,0	1/1:433:13,420:13:468:420:15042:-1310.76,-87.8863,0	0/1:76:46,30:46:1641:30:1080:-74.635,0,-124.955	0/1:127:72,55:72:2592:55:1976:-139.847,0,-195.297	1/1:188:2,186:2:72:186:6649:-591.629,-49.7569,0	1/1:136:0,136:0:0:136:4880:-439.323,-40.9401,0	1/1:200:0,200:0:0:200:7176:-645.851,-60.206,0	1/1:48:0,48:0:0:48:1728:-155.801,-14.4494,0	1/1:95:1,94:1:36:94:3354:-298.442,-24.9996,0	1/1:124:1,123:1:36:123:4393:-391.897,-33.7294,0	0/1:101:70,31:70:2508:31:1112:-69.9873,0,-195.568	1/1:268:2,266:2:72:266:9543:-851.758,-73.8393,0	0/1:83:56,27:56:2008:27:960:-61.6907,0,-156.008	1/1:64:0,64:0:0:64:2300:-207.261,-19.2659,0	1/1:326:13,313:13:464:313:11208:-966.26,-56.0383,0	1/1:152:0,152:0:0:152:5448:-489.972,-45.7566,0	0/1:71:42,29:42:1508:29:1036:-72.1726,0,-114.633	0/1:157:71,85:71:2548:85:3052:-227.574,0,-182.25	0/1:190:98,92:98:3513:92:3297:-239.574,0,-259.166	0/1:106:57,49:57:2040:49:1745:-125.089,0,-151.961	1/1:127:0,127:0:0:127:4545:-408.18,-38.2308,0	1/1:452:8,443:8:288:443:15859:-1400.34,-109.857,0	0/1:113:77,36:77:2753:36:1296:-82.9275,0,-213.989	1/1:132:0,132:0:0:132:4736:-426.359,-39.736,0	1/1:194:0,194:0:0:194:6960:-626.147,-58.3998,0	0/1:105:71,34:71:2552:34:1224:-78.8473,0,-198.321	1/1:41:1,40:1:36:40:1440:-126.225,-8.74396,0	0/1:89:50,39:50:1780:39:1400:-99.5013,0,-133.691	1/1:142:1,141:1:36:141:5072:-452.999,-39.148,0	0/1:43:19,24:19:684:24:864:-65.1301,0,-48.7553	0/1:97:43,54:43:1528:54:1944:-146.028,0,-107.675	0/1:87:51,36:51:1816:36:1292:-90.386,0,-137.502	0/1:249:79,170:79:2832:170:6104:-474.452,0,-180.032	0/1:383:43,340:43:1544:340:12212:-983.245,0,-23.9586	0/1:83:71,12:71:2544:12:432:-14.2334,0,-204.225	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:133:0,133:0:0:133:4764:-428.902,-40.037,0
chr03	28960518	.	C	G	305972	PASS	AB=0.521856;ABP=26.1706;AC=142;AF=0.755319;AN=188;AO=14171;CIGAR=1X;DP=16925;DPB=16925;DPRA=0;EPP=30774.9;EPPR=5907.26;GTI=1;LEN=1;MEANALT=1.24468;MQM=59.7221;MQMR=59.9428;NS=94;NUMALT=1;ODDS=4.89034;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=505093;QR=96519;RO=2727;RPL=14171;RPP=30774.9;RPPR=5907.26;RPR=0;RUN=1;SAF=14171;SAP=30774.9;SAR=0;SRF=2727;SRP=5924.62;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:26,27:26:908:27:953:-69.8847,0,-65.8339	0/1:218:124,93:124:4377:93:3327:-233.953,0,-328.398	0/1:108:49,59:49:1739:59:2107:-157.094,0,-124.281	1/1:206:0,205:0:0:205:7324:-658.77,-61.7112,0	0/1:37:17,20:17:599:20:716:-53.6296,0,-43.1	0/1:49:30,19:30:1080:19:680:-46.7623,0,-82.7628	0/1:131:81,50:81:2886:50:1784:-121.403,0,-220.541	0/1:152:77,75:77:2759:75:2669:-194.492,0,-202.794	0/1:112:52,60:52:1868:60:2115:-156.893,0,-134.681	0/1:54:33,19:33:1165:19:684:-45.8814,0,-89.0604	0/1:196:32,163:32:1139:163:5780:-461.282,0,-43.7965	0/1:82:40,42:40:1411:42:1488:-109.522,0,-102.602	0/1:85:38,47:38:1342:47:1668:-124.784,0,-95.491	1/1:58:0,58:0:0:58:2034:-183.323,-17.4597,0	0/1:57:33,24:33:1164:24:832:-58.0271,0,-87.9055	0/1:115:74,41:74:2582:41:1455:-96.6176,0,-198.008	0/1:57:30,27:30:1054:27:938:-67.5624,0,-78.0105	1/1:66:0,66:0:0:66:2364:-213.002,-19.868,0	0/1:128:27,101:27:959:101:3549:-281.072,0,-48.0936	1/1:219:2,217:2:72:217:7731:-688.974,-59.0888,0	1/1:122:0,122:0:0:122:4326:-389.493,-36.7257,0	1/1:156:1,154:1:36:154:5494:-490.941,-43.4212,0	0/1:59:40,19:40:1436:19:684:-44.1272,0,-111.777	0/1:104:46,58:46:1622:58:2067:-154.989,0,-114.958	1/1:71:0,71:0:0:71:2548:-229.569,-21.3731,0	0/1:297:160,136:160:5680:136:4851:-347.361,0,-421.944	1/1:232:1,231:1:36:231:8184:-732.936,-66.2407,0	0/1:39:21,18:21:744:18:631:-45.3755,0,-55.5442	1/1:307:0,307:0:0:307:10995:-989.428,-92.4162,0	0/1:176:92,82:92:3272:82:2928:-211.017,0,-241.994	1/1:129:0,129:0:0:129:4605:-414.609,-38.8329,0	1/1:744:2,742:2:57:742:26496:-2378.04,-218.553,0	1/1:346:9,337:9:320:337:12027:-1053.08,-75.014,0	1/1:663:0,662:0:0:662:23561:-2119.24,-199.282,0	1/1:983:1,982:1:36:982:35059:-3150.21,-292.314,0	1/1:788:1,787:1:36:787:28025:-2515.96,-233.613,0	1/1:230:0,230:0:0:230:8168:-735.096,-69.2369,0	0/1:252:138,114:138:4940:114:4072:-290.796,0,-368.881	0/1:267:45,222:45:1575:222:7890:-629.587,0,-61.662	1/1:183:3,180:3:108:180:6385:-564.645,-45.0133,0	0/1:135:69,65:69:2463:65:2323:-168.696,0,-181.295	1/1:237:0,237:0:0:237:8415:-757.304,-71.3441,0	1/1:142:0,142:0:0:142:5069:-456.349,-42.7463,0	1/1:59:0,59:0:0:59:2103:-189.534,-17.7608,0	1/1:53:0,53:0:0:53:1875:-169,-15.9546,0	1/1:85:0,85:0:0:85:3039:-273.738,-25.5876,0	0/1:141:85,56:85:3047:56:1988:-136.738,0,-232.013	1/1:116:0,116:0:0:116:4145:-373.202,-34.9195,0	1/1:126:0,125:0:0:125:4480:-403.002,-37.6288,0	1/1:199:0,199:0:0:199:7144:-642.926,-59.905,0	0/1:147:91,56:91:3239:56:1988:-134.923,0,-247.478	1/1:639:1,638:1:36:638:22793:-2047.05,-188.76,0	0/1:126:73,53:73:2561:53:1894:-132.362,0,-192.806	0/1:53:26,27:26:932:27:972:-71.8433,0,-68.2443	1/1:381:5,375:5:180:375:13406:-1189.64,-98.1992,0	1/1:120:0,120:0:0:120:4293:-386.542,-36.1236,0	0/1:32:14,18:14:504:18:644:-48.6576,0,-36.0651	1/1:480:0,479:0:0:479:17125:-1540.45,-144.193,0	1/1:416:14,402:14:500:402:14308:-1242.03,-79.8923,0	0/1:75:45,30:45:1593:30:1080:-74.936,0,-121.079	0/1:123:68,55:68:2413:55:1955:-139.143,0,-180.398	1/1:184:3,181:3:108:181:6452:-570.67,-45.3144,0	1/1:137:0,135:0:0:135:4830:-434.437,-40.6391,0	1/1:201:0,200:0:0:200:7135:-641.806,-60.206,0	1/1:48:0,47:0:0:47:1671:-150.312,-14.1484,0	1/1:94:1,93:1:36:93:3330:-296.281,-24.6985,0	1/1:120:1,119:1:36:119:4272:-381.047,-32.5253,0	0/1:98:67,31:67:2368:31:1108:-70.5301,0,-183.876	1/1:268:3,265:3:108:265:9389:-834.781,-70.6009,0	0/1:82:56,26:56:1984:26:932:-59.5073,0,-154.147	1/1:61:0,61:0:0:61:2148:-193.586,-18.3628,0	1/1:323:13,309:13:460:309:11030:-950.441,-55.5557,0	1/1:149:1,148:1:36:148:5276:-471.329,-41.2552,0	0/1:70:41,29:41:1460:29:1016:-70.6687,0,-110.621	0/1:155:68,87:68:2389:87:3128:-235.072,0,-168.605	0/1:187:97,90:97:3441:90:3212:-232.919,0,-253.592	0/1:104:55,48:55:1945:48:1724:-124.063,0,-143.957	1/1:118:0,118:0:0:118:4232:-380.97,-35.5215,0	1/1:448:9,439:9:324:439:15703:-1383.11,-105.356,0	0/1:114:76,35:76:2684:35:1256:-79.5714,0,-208.03	1/1:125:0,124:0:0:124:4402:-395.957,-37.3277,0	1/1:195:0,195:0:0:195:6991:-628.935,-58.7009,0	0/1:104:71,33:71:2520:33:1150:-72.4921,0,-195.743	1/1:41:1,40:1:36:40:1389:-121.633,-8.74396,0	0/1:88:48,39:48:1647:39:1379:-97.8525,0,-121.96	1/1:137:1,136:1:36:136:4853:-433.297,-37.6428,0	0/1:41:17,24:17:595:24:864:-65.7322,0,-41.5344	0/1:94:41,53:41:1416:53:1879:-141.083,0,-98.4951	0/1:84:49,34:49:1726:34:1218:-84.6933,0,-130.394	0/1:247:79,168:79:2750:168:5917:-458.241,0,-173.367	0/1:372:44,328:44:1545:328:11640:-935.132,0,-27.3564	0/1:81:69,12:69:2399:12:420:-13.7482,0,-191.778	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:131:0,131:0:0:131:4662:-419.726,-39.4349,0
chr03	28960521	.	GTACC	GTACT,TTACT	373927	PASS	AB=0.517096,0.478345;ABP=17.4887,26.2401;AC=142,46;AF=0.755319,0.244681;AN=188;AO=14337,2804;CIGAR=4M1X,1X3M1X;DP=17221;DPB=17225.8;DPRA=0,1.23324;EPP=31135.4,6091.82;EPPR=22.5536;GTI=1;LEN=1,5;MEANALT=2.3617,2.72308;MQM=59.7281,59.9301;MQMR=60;NS=94;NUMALT=2;ODDS=6.58203;PAIRED=0,0;PAIREDR=0;PAO=3.5,2;PQA=121.5,72;PQR=121.5;PRO=3.5;QA=512235,98845;QR=315;RO=9;RPL=14337,2804;RPP=31135.4,6091.82;RPPR=22.5536;RPR=0,0;RUN=1,1;SAF=14337,2804;SAP=31135.4,6091.82;SAR=0,0;SRF=9;SRP=22.5536;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:55:0,27,28:0:0:27,28:968,958:-157.059,-78.0997,-69.9719,-79.3096,0,-70.8807	1/2:226:0,96,129:0:0:96,129:3448,4538:-650.651,-369.388,-340.489,-281.259,0,-242.427	1/2:110:0,59,51:0:0:59,51:2116,1784:-316.865,-145.481,-127.72,-171.736,0,-156.384	1/1:219:0,217,0:0:0:217,0:7756,0:-697.567,-65.3235,0,-697.567,-65.3235,-697.567	1/2:38:0,20,18:0:0:20,18:720,611:-108.647,-49.8883,-43.8677,-59.1082,0,-53.6896	1/2:49:0,19,30:0:0:19,30:684,1060:-142.477,-86.6801,-80.9605,-56.1544,0,-47.1235	1/2:136:0,54,82:0:0:54,82:1927,2884:-391.841,-234.753,-218.497,-157.084,0,-132.399	1/2:156:0,78,78:0:0:78,78:2783,2758:-451.653,-224.984,-201.503,-227.024,0,-203.544	1/2:114:0,58,54:0:0:58,54:2080,1916:-325.763,-156.109,-138.649,-169.661,0,-153.405	1/2:54:0,19,34:0:0:19,34:684,1203:-153.883,-98.0689,-92.3493,-55.8975,0,-45.6625	1/2:200:0,166,33:0:0:166,33:5948,1169:-580.232,-95.2243,-45.2533,-485.003,0,-475.069	1/2:82:0,41,41:0:0:41,41:1461,1444:-237,-117.913,-105.571,-119.441,0,-107.099	1/2:86:0,47,39:0:0:47,39:1667,1356:-246.377,-110.595,-96.447,-136.132,0,-124.392	1/1:58:1,56,0:1:36:56,0:2000,0:-176.714,-13.8753,0,-177.015,-16.8577,-179.953	1/2:60:0,25,35:0:0:25,35:892,1238:-173.898,-101.187,-93.6615,-73.0658,0,-62.5297	1/2:116:0,41,74:0:0:41,74:1448,2601:-329.602,-211.702,-199.36,-117.893,0,-95.6165	1/2:59:0,28,31:0:0:28,31:991,1101:-170.781,-90.069,-81.6401,-81.0665,0,-71.7346	1/1:68:0,67,0:0:0:67,0:2404,0:-216.246,-20.169,0,-216.246,-20.169,-216.246	1/2:131:0,102,26:0:0:102,26:3644,924:-372.419,-75.3306,-44.6255,-297.123,0,-289.296	1/1:222:0,220,2:0:0:220,2:7840,72:-705.253,-66.2266,0,-699.378,-59.9919,-698.776	1/1:126:0,125,0:0:0:125,0:4471,0:-402.183,-37.6288,0,-402.183,-37.6288,-402.183	1/1:156:0,155,1:0:0:155,1:5559,36:-500.023,-46.6597,0,-497.085,-43.3624,-496.784	1/2:60:0,19,41:0:0:19,41:684,1469:-175.973,-120.164,-114.445,-56.1684,0,-43.8262	1/2:107:0,60,47:0:0:60,47:2145,1659:-310.343,-135.448,-117.386,-175.249,0,-161.101	1/1:73:0,73,0:0:0:73,0:2611,0:-235.237,-21.9752,0,-235.237,-21.9752,-235.237	1/2:310:0,140,169:0:0:140,169:5021,5959:-894.795,-485.278,-443.133,-409.603,0,-358.729	1/1:230:0,229,1:0:0:229,1:8172,36:-734.969,-68.9359,0,-732.032,-65.6386,-731.731	1/2:40:0,18,22:0:0:18,22:639,783:-116.236,-64.1714,-58.7529,-52.4197,0,-45.797	1/1:309:0,307,0:0:0:307,0:10987,0:-988.268,-92.4162,0,-988.268,-92.4162,-988.268	1/2:175:0,82,93:0:0:82,93:2908,3255:-502.078,-265.179,-240.495,-237.252,0,-209.256	1/1:130:0,130,0:0:0:130,0:4655,0:-419.106,-39.1339,0,-419.106,-39.1339,-419.106	1/1:757:0,751,1:0:0:751,1:26826,36:-2413.03,-226.074,0,-2410.09,-223.133,-2409.79	1/1:351:0,341,9:0:0:341,9:12185,313:-1096.04,-102.651,0,-1070.59,-77.1958,-1067.88	1/1:673:0,665,4:0:0:665,4:23742,141:-2135.3,-200.185,0,-2123.83,-188.718,-2122.63	1/1:997:0,994,0:0:0:994,0:35465,0:-3189.36,-299.224,0,-3189.36,-299.224,-3189.36	1/1:798:0,791,1:0:0:791,1:28252,35:-2541.11,-238.115,0,-2538.26,-235.259,-2537.96	1/1:230:0,230,0:0:0:230,0:8217,0:-739.408,-69.2369,0,-739.408,-69.2369,-739.408	1/2:264:0,118,141:0:0:118,141:4219,4971:-748.765,-404.758,-369.236,-344.022,0,-301.577	1/2:272:0,226,46:0:0:226,46:8070,1623:-790.248,-132.511,-64.478,-658.091,0,-644.243	1/1:190:0,187,3:0:0:187,3:6660,108:-598.99,-56.2926,0,-590.178,-47.1205,-589.275	1/2:137:0,67,69:0:0:67,69:2391,2438:-393.454,-198.544,-178.375,-194.905,0,-174.134	1/1:241:0,239,0:0:0:239,0:8537,0:-767.928,-71.9462,0,-767.928,-71.9462,-767.928	1/1:142:0,142,0:0:0:142,0:5076,0:-456.977,-42.7463,0,-456.977,-42.7463,-456.977	1/1:62:1,61,0:1:35:61,0:2188,0:-193.682,-15.1652,0,-193.983,-18.3628,-196.831	1/1:51:0,51,0:0:0:51,0:1799,0:-162.124,-15.3525,0,-162.124,-15.3525,-162.124	1/1:85:0,84,0:0:0:84,0:3016,0:-271.389,-25.2865,0,-271.389,-25.2865,-271.389	1/2:140:0,54,86:0:0:54,86:1916,3010:-401.343,-245.245,-228.989,-156.451,0,-130.562	1/1:112:0,112,0:0:0:112,0:4009,0:-360.993,-33.7154,0,-360.993,-33.7154,-360.993	1/1:130:0,129,0:0:0:129,0:4613,0:-414.968,-38.8329,0,-414.968,-38.8329,-414.968	1/1:203:0,202,0:0:0:202,0:7251,0:-652.376,-60.8081,0,-652.376,-60.8081,-652.376	1/2:150:0,57,93:0:0:57,93:2039,3303:-435.736,-269.494,-252.336,-166.599,0,-138.603	1/1:646:1,644,1:1:35:644,1:23021,36:-2067.65,-191.021,0,-2065.02,-190.921,-2067.56	1/2:130:0,53,75:0:0:53,75:1899,2631:-368.989,-214.174,-198.219,-154.881,0,-132.304	1/2:54:0,28,26:0:0:28,26:1004,927:-157.811,-75.9213,-67.4925,-82.247,0,-74.4202	1/1:392:1,382,5:1:30:382,5:13656,178:-1225.62,-112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chr03	28966744	.	T	C	125288	PASS	AB=0.53974;ABP=59.9644;AC=135;AF=0.718085;AN=188;AO=7626;CIGAR=1X;DP=9554;DPB=9554;DPRA=0;EPP=16562.7;EPPR=4170.07;GTI=6;LEN=1;MEANALT=1.08511;MQM=31.7729;MQMR=58.8473;NS=94;NUMALT=1;ODDS=6.04553;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=273259;QR=68749;RO=1919;RPL=0;RPP=16562.7;RPPR=4170.07;RPR=7626;RUN=1;SAF=7626;SAP=16562.7;SAR=0;SRF=1919;SRP=4170.07;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:115:64,51:64:2296:51:1832:-105.476,0,-172.179	0/1:61:40,21:40:1421:21:752:-39.5328,0,-109.759	0/1:174:63,111:63:2260:111:3946:-250.243,0,-150.447	1/1:278:1,277:1:36:277:9932:-754.22,-80.0885,0	0/1:81:29,52:29:1040:52:1864:-118.183,0,-69.4721	0/1:32:15,17:15:540:17:612:-37.4069,0,-39.0299	0/1:83:22,61:22:784:61:2192:-141.731,0,-45.8459	0/1:194:80,114:80:2872:114:4096:-255.083,0,-200.227	0/1:112:53,59:53:1888:59:2120:-128.509,0,-136.459	0/1:80:43,37:43:1544:37:1328:-77.5513,0,-114.925	0/1:9:7,2:7:252:2:72:-3.09435,0,-20.2643	0/1:29:15,14:15:540:14:504:-30.0628,0,-40.2067	0/1:29:15,14:15:536:14:504:-29.851,0,-39.7998	1/1:11:0,11:0:0:11:392:-28.9878,-3.31133,0	0/1:22:13,9:13:468:9:324:-18.8074,0,-35.8326	0/1:17:7,10:7:252:10:356:-22.5373,0,-17.9105	0/1:10:5,5:5:180:5:180:-11.0406,0,-13.5418	1/1:11:0,11:0:0:11:396:-30.3331,-3.31133,0	0/1:4:2,2:2:72:2:72:-4.5995,0,-5.6326	1/1:305:0,305:0:0:305:10932:-829.391,-91.8142,0	1/1:163:0,163:0:0:163:5860:-444.359,-49.0679,0	1/1:234:0,233:0:0:233:8317:-633.927,-70.14,0	0/1:165:71,94:71:2544:94:3372:-207.506,0,-179.478	0/1:108:49,59:49:1737:59:2108:-129.156,0,-123.952	1/1:149:0,149:0:0:149:5337:-405.88,-44.8535,0	0/1:428:196,232:196:7005:232:8300:-502.905,0,-498.752	1/1:317:0,317:0:0:317:11364:-866.134,-95.4265,0	0/1:6:2,4:2:72:4:144:-9.49561,0,-5.03054	1/1:369:1,367:1:36:367:13176:-999.603,-108.03,0	0/1:166:81,85:81:2912:85:3056:-182.705,0,-212.271	1/1:206:0,206:0:0:206:7368:-561.345,-62.0122,0	1/1:21:0,21:0:0:21:752:-57.8956,-6.32163,0	0/1:23:4,19:4:144:19:684:-45.5476,0,-6.3439	1/1:8:0,8:0:0:8:288:-22.2981,-2.40824,0	1/1:9:0,9:0:0:9:320:-24.9056,-2.70927,0	1/1:8:0,8:0:0:8:288:-22.2981,-2.40824,0	1/1:56:0,54:0:0:54:1936:-146.094,-16.2556,0	0/1:193:104,89:104:3721:89:3186:-183.523,0,-276.967	0/1:12:6,6:6:216:6:216:-13.0485,0,-16.1782	0/1:9:7,2:7:248:2:72:-3.09435,0,-19.9549	0/1:139:54,85:54:1925:85:3048:-190.599,0,-131.622	1/1:8:0,8:0:0:8:288:-22.2981,-2.40824,0	1/1:201:0,201:0:0:201:7196:-545.603,-60.507,0	1/1:12:0,12:0:0:12:428:-33.1053,-3.61236,0	1/1:24:0,24:0:0:24:856:-65.116,-7.22472,0	1/1:191:0,191:0:0:191:6864:-516.994,-57.4967,0	0/1:126:57,69:57:2044:69:2476:-151.845,0,-146.23	1/1:230:1,229:1:36:229:8208:-621.938,-65.6386,0	1/1:122:0,122:0:0:122:4368:-331.61,-36.7257,0	1/1:190:0,190:0:0:190:6808:-515.422,-57.1957,0	0/1:204:107,97:107:3832:97:3472:-202.902,0,-283.034	1/1:17:0,17:0:0:17:612:-45.1095,-5.11751,0	0/1:157:75,82:75:2696:82:2926:-177.713,0,-195.599	0/1:91:28,63:28:1008:63:2251:-144.082,0,-63.5619	0/1:18:3,15:3:108:15:536:-35.9153,0,-4.65663	1/1:177:0,177:0:0:177:6351:-477.52,-53.2823,0	0/1:85:40,44:40:1436:44:1576:-92.7603,0,-103.881	1/1:13:0,13:0:0:13:468:-36.0435,-3.91339,0	0/1:21:10,11:10:352:11:392:-24.0824,0,-25.6861	0/1:81:27,54:27:968:54:1936:-124.026,0,-63.0535	0/1:47:24,23:24:864:23:820:-48.2295,0,-63.9265	0/1:12:8,4:8:288:4:136:-7.35299,0,-22.653	1/1:249:0,248:0:0:248:8874:-672.611,-74.6554,0	1/1:273:3,269:3:108:269:9648:-726.838,-72.0508,0	1/1:62:0,62:0:0:62:2212:-168.419,-18.6639,0	1/1:116:0,116:0:0:116:4176:-317.506,-34.9195,0	1/1:268:1,267:1:36:267:9596:-726.719,-77.0782,0	0/1:165:107,57:107:3844:57:2036:-106.649,0,-295.548	1/1:7:0,7:0:0:7:252:-19.549,-2.10721,0	0/1:38:20,18:20:720:18:648:-38.3498,0,-53.6896	1/1:29:0,29:0:0:29:1040:-79.8885,-8.72987,0	0/1:24:8,16:8:284:16:572:-36.8731,0,-18.6316	1/1:179:0,179:0:0:179:6403:-490.667,-53.8844,0	0/1:91:42,49:42:1504:49:1748:-106.919,0,-108.215	0/1:149:64,85:64:2288:85:3040:-187.164,0,-160.92	0/1:145:61,84:61:2192:84:3005:-185.058,0,-153.88	0/1:111:50,61:50:1788:61:2196:-133.824,0,-127.673	1/1:72:2,69:2:72:69:2476:-182.846,-14.9064,0	0/1:15:3,12:3:108:12:428:-28.6378,0,-5.4876	0/1:107:35,72:35:1256:72:2580:-165.759,0,-81.02	1/1:178:0,178:0:0:178:6361:-486.724,-53.5833,0	1/1:327:0,327:0:0:327:11716:-886.618,-98.4368,0	0/1:33:17,16:17:612:16:576:-34.3568,0,-45.4746	1/1:22:0,22:0:0:22:792:-59.3094,-6.62266,0	0/1:16:8,8:8:284:8:288:-17.4816,0,-21.0857	1/1:30:0,30:0:0:30:1080:-82.6409,-9.0309,0	0/1:18:7,11:7:252:11:396:-25.1268,0,-17.6104	0/1:24:13,11:13:468:11:381:-22.4229,0,-35.2349	0/1:17:10,7:10:360:7:252:-14.4315,0,-27.6268	0/1:6:2,4:2:72:4:144:-9.49561,0,-5.03054	0/1:16:9,7:9:320:7:252:-14.7326,0,-24.25	0/1:34:27,7:27:972:7:248:-9.17191,0,-77.5115	1/1:225:1,224:1:36:224:8028:-605.28,-64.1403,0	1/1:35:0,35:0:0:35:1249:-94.9984,-10.5361,0
chr03	28966787	.	C	T	123090	PASS	AB=0.539981;ABP=60.6568;AC=135;AF=0.718085;AN=188;AO=7591;CIGAR=1X;DP=9512;DPB=9512;DPRA=0;EPP=16486.7;EPPR=4165.72;GTI=6;LEN=1;MEANALT=1.04255;MQM=31.7791;MQMR=58.9416;NS=94;NUMALT=1;ODDS=3.9453;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=268132;QR=67991;RO=1917;RPL=7591;RPP=16486.7;RPPR=4165.72;RPR=0;RUN=1;SAF=7591;SAP=16486.7;SAR=0;SRF=1917;SRP=4165.72;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:111:60,51:60:2109:51:1784:-104.521,0,-156.617	0/1:62:42,20:42:1471:20:716:-36.4826,0,-113.971	0/1:175:63,112:63:2200:112:3952:-252.039,0,-144.961	1/1:275:1,274:1:36:274:9667:-739.587,-79.1854,0	0/1:81:28,53:28:984:53:1849:-118.81,0,-64.4304	0/1:32:14,18:14:504:18:636:-39.7337,0,-36.02	0/1:84:23,61:23:824:61:2171:-141.065,0,-49.1885	0/1:200:82,118:82:2929:118:4211:-263.147,0,-203.547	0/1:111:53,58:53:1878:58:2076:-125.781,0,-135.823	0/1:79:42,37:42:1503:37:1307:-77.0705,0,-111.764	0/1:9:7,2:7:248:2:68:-2.94669,0,-19.8995	0/1:31:15,16:15:540:16:533:-32.8193,0,-39.6046	0/1:29:15,14:15:528:14:492:-29.428,0,-39.0764	1/1:12:0,12:0:0:12:428:-31.7382,-3.61236,0	0/1:21:13,8:13:453:8:288:-15.9092,0,-34.7299	0/1:16:7,9:7:248:9:324:-20.2307,0,-17.8468	0/1:10:5,5:5:171:5:172:-10.7546,0,-12.7152	1/1:11:0,11:0:0:11:388:-30.0505,-3.31133,0	0/1:4:2,2:2:72:2:72:-4.5995,0,-5.6326	1/1:299:0,299:0:0:299:10526:-805.863,-90.008,0	1/1:160:0,160:0:0:160:5673:-433.324,-48.1648,0	1/1:231:0,230:0:0:230:8072:-618.675,-69.2369,0	0/1:168:74,94:74:2625:94:3331:-204.555,0,-185.854	0/1:106:48,58:48:1685:58:2043:-126.103,0,-119.979	1/1:151:0,151:0:0:151:5282:-404.971,-45.4555,0	0/1:431:196,235:196:6956:235:8355:-508.514,0,-494.282	1/1:314:0,313:0:0:313:10999:-845.164,-94.2224,0	0/1:7:3,4:3:108:4:135:-8.75644,0,-7.96796	1/1:364:0,364:0:0:364:12851:-985.378,-109.575,0	0/1:167:83,84:83:2962:84:2963:-177.943,0,-216.467	1/1:203:0,203:0:0:203:7193:-551.215,-61.1091,0	1/1:21:0,21:0:0:21:752:-57.8956,-6.32163,0	0/1:23:3,20:3:104:20:716:-48.622,0,-2.77912	1/1:8:0,8:0:0:8:275:-21.7241,-2.40824,0	1/1:9:0,9:0:0:9:316:-24.764,-2.70927,0	1/1:9:0,9:0:0:9:305:-24.0059,-2.70927,0	1/1:53:0,53:0:0:53:1844:-141.407,-15.9546,0	0/1:193:104,89:104:3711:89:3164:-182.771,0,-276.042	0/1:12:6,6:6:208:6:208:-12.8005,0,-15.4467	0/1:9:7,2:7:248:2:72:-3.09435,0,-19.9549	0/1:138:53,85:53:1892:85:2997:-188.883,0,-128.935	1/1:8:0,8:0:0:8:275:-21.7241,-2.40824,0	1/1:202:1,201:1:36:201:7117:-537.3,-57.2595,0	1/1:12:0,12:0:0:12:432:-33.2274,-3.61236,0	1/1:23:0,23:0:0:23:801:-61.4589,-6.92369,0	1/1:193:0,193:0:0:193:6858:-519.974,-58.0988,0	0/1:126:55,71:55:1968:71:2518:-156.006,0,-139.412	1/1:235:1,234:1:36:234:8211:-625.711,-67.1438,0	1/1:121:0,121:0:0:121:4262:-326.208,-36.4246,0	1/1:188:0,188:0:0:188:6669:-506.787,-56.5936,0	0/1:200:105,95:105:3728:95:3340:-196.969,0,-274.997	1/1:16:0,16:0:0:16:572:-42.2188,-4.81648,0	0/1:158:76,82:76:2686:82:2883:-174.891,0,-194.355	0/1:94:29,65:29:1036:65:2295:-147.194,0,-65.1766	0/1:18:3,15:3:108:15:532:-35.7934,0,-4.65663	1/1:177:0,177:0:0:177:6190:-471.73,-53.2823,0	0/1:85:40,45:40:1417:45:1600:-95.0931,0,-102.174	1/1:13:0,13:0:0:13:464:-35.9025,-3.91339,0	0/1:22:9,13:9:309:13:460:-29.1387,0,-21.5112	0/1:76:26,50:26:928:50:1788:-114.461,0,-60.9596	0/1:46:24,22:24:847:22:784:-45.7812,0,-62.6942	0/1:12:8,4:8:284:4:144:-7.62118,0,-22.2892	1/1:251:0,251:0:0:251:8911:-679.319,-75.5585,0	1/1:270:3,267:3:108:267:9512:-718.687,-71.2038,0	1/1:60:0,60:0:0:60:2115:-162.016,-18.0618,0	1/1:115:0,115:0:0:115:4066:-311.486,-34.6185,0	1/1:265:1,264:1:36:264:9329:-712.208,-76.1751,0	0/1:165:109,56:109:3867:56:1988:-102.646,0,-297.617	1/1:7:0,7:0:0:7:252:-19.549,-2.10721,0	0/1:36:19,17:19:676:17:600:-35.7804,0,-50.3309	1/1:29:0,29:0:0:29:1031:-79.4605,-8.72987,0	0/1:24:7,16:7:248:16:568:-36.7004,0,-15.3841	1/1:172:0,172:0:0:172:6002:-465.059,-51.7772,0	0/1:92:44,48:44:1540:48:1693:-102.838,0,-111.13	0/1:153:67,85:67:2388:85:3030:-185.205,0,-168.703	0/1:145:62,83:62:2200:83:2946:-181.777,0,-154.598	0/1:108:48,60:48:1708:60:2139:-131.341,0,-121.42	1/1:76:1,75:1:36:75:2649:-201.071,-19.28,0	0/1:15:3,12:3:108:12:423:-28.3488,0,-5.4876	0/1:105:35,70:35:1239:70:2471:-159.4,0,-80.0904	1/1:178:0,178:0:0:178:6280:-483.596,-53.5833,0	1/1:319:0,319:0:0:319:11309:-860.841,-96.0286,0	0/1:34:18,16:18:644:16:572:-33.9149,0,-47.9205	1/1:22:0,22:0:0:22:784:-59.0471,-6.62266,0	0/1:15:7,8:7:248:8:288:-17.7827,0,-18.1478	1/1:30:0,30:0:0:30:1064:-82.0792,-9.0309,0	0/1:18:7,11:7:252:11:368:-23.6572,0,-17.6104	0/1:23:12,11:12:424:11:381:-22.724,0,-31.5727	0/1:17:10,7:10:352:7:236:-13.8631,0,-26.9007	0/1:6:2,4:2:72:4:144:-9.49561,0,-5.03054	0/1:16:9,7:9:306:7:248:-14.5905,0,-23.0067	0/1:34:26,8:26:923:8:284:-11.9213,0,-73.1457	1/1:222:1,221:1:36:221:7773:-591.514,-63.2372,0	1/1:36:0,36:0:0:36:1275:-97.3579,-10.8371,0
chr03	29101203	.	C	T	33258.1	PASS	AB=0.496271;ABP=3.49621;AC=52;AF=0.276596;AN=188;AO=2000;CIGAR=1X;DP=7982;DPB=7982;DPRA=0.896867;EPP=4319.94;EPPR=12862.8;GTI=0;LEN=1;MEANALT=1;MQM=59.9875;MQMR=59.9943;NS=94;NUMALT=1;ODDS=5.75956;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71119;QR=213132;RO=5982;RPL=1997;RPP=4319.94;RPPR=12862.8;RPR=3;RUN=1;SAF=2000;SAP=4345.96;SAR=0;SRF=5982;SRP=12992.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:16:7,9:7:252:9:320:-24.3259,0,-18.2125	0/1:59:30,29:30:1063:29:1040:-76.1536,0,-78.2201	0/1:91:43,48:43:1548:48:1711:-126.881,0,-112.219	0/0:155:154,1:154:5499:1:36:0,-43.0614,-491.437	0/1:64:42,22:42:1508:22:784:-51.618,0,-116.749	0/1:39:19,20:19:680:20:716:-53.0275,0,-49.789	0/1:120:59,61:59:2116:61:2142:-156.85,0,-154.585	0/1:89:43,46:43:1531:46:1636:-120.737,0,-111.291	0/1:74:35,39:35:1243:39:1392:-103.303,0,-89.8976	0/1:62:35,27:35:1256:27:968:-68.7735,0,-94.6814	0/1:61:31,30:31:1099:30:1062:-77.5271,0,-80.8566	0/1:110:53,57:53:1876:57:2044:-151.118,0,-136.003	0/1:74:39,35:39:1372:35:1232:-88.9059,0,-101.5	0/0:87:87,0:87:3100:0:0:0,-26.1896,-279.226	0/1:70:28,42:28:999:42:1482:-112.601,0,-69.1524	0/1:78:40,38:40:1424:38:1351:-98.4093,0,-104.977	0/1:42:20,22:20:716:22:792:-58.9624,0,-52.1245	0/0:21:21,0:21:739:0:0:0,-6.32163,-66.8324	0/1:52:28,24:28:1004:24:846:-60.8042,0,-75.0223	0/0:141:141,0:141:4990:0:0:0,-42.4452,-449.248	0/0:152:152,0:152:5401:0:0:0,-45.7566,-486.221	0/0:180:180,0:180:6444:0:0:0,-54.1854,-580.047	0/1:115:55,60:55:1957:60:2152:-159.329,0,-141.785	0/1:51:34,17:34:1224:17:600:-38.9767,0,-95.1145	0/0:76:76,0:76:2714:0:0:0,-22.8783,-244.503	0/1:176:73,103:73:2604:103:3675:-277.972,0,-181.628	0/0:303:303,0:303:10787:0:0:0,-91.2121,-970.737	0/1:33:21,12:21:752:12:420:-28.2,0,-58.0723	0/0:243:243,0:243:8676:0:0:0,-73.1503,-780.833	0/1:103:53,50:53:1900:50:1762:-127.857,0,-140.272	0/0:111:110,1:110:3908:1:36:0,-29.8161,-348.315	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:19:10,9:10:360:9:320:-23.4228,0,-27.0247	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/0:223:223,0:223:7943:0:0:0,-67.1297,-714.896	0/1:130:67,63:67:2400:63:2260:-164.529,0,-177.123	0/1:68:41,27:41:1468:27:968:-66.9673,0,-111.946	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:105:56,49:56:2000:49:1744:-125.636,0,-148.666	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:110:110,0:110:3935:0:0:0,-33.1133,-354.342	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.634	0/0:66:66,0:66:2327:0:0:0,-19.868,-209.688	0/0:123:123,0:123:4342:0:0:0,-37.0267,-390.955	0/1:105:53,52:53:1900:52:1849:-135.073,0,-139.67	0/0:120:119,1:119:4253:1:32:0,-32.9243,-379.748	0/0:106:106,0:106:3747:0:0:0,-31.9092,-337.429	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.716	0/1:153:80,73:80:2852:73:2594:-187.652,0,-210.858	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:138:77,61:77:2759:61:2169:-153.933,0,-207.009	0/1:42:21,21:21:720:21:752:-55.363,0,-52.4723	0/1:11:2,9:2:72:9:320:-25.831,0,-3.52539	0/0:101:101,0:101:3583:0:0:0,-30.404,-322.677	0/1:80:40,40:40:1410:40:1413:-103.383,0,-103.113	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:15:4,11:4:144:11:392:-31.1046,0,-8.79817	0/1:100:51,49:51:1828:49:1747:-127.411,0,-134.698	0/1:133:69,64:69:2445:64:2270:-164.525,0,-180.267	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:144:144,0:144:5136:0:0:0,-43.3483,-462.381	0/0:116:116,0:116:4104:0:0:0,-34.9195,-369.545	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.282	0/1:65:35,30:35:1256:30:1076:-77.5859,0,-93.7783	0/0:153:153,0:153:5453:0:0:0,-46.0576,-490.899	0/1:113:49,64:49:1747:64:2281:-171.534,0,-123.497	0/0:43:43,0:43:1521:0:0:0,-12.9443,-136.553	0/1:47:34,13:34:1224:13:458:-27.4057,0,-96.3186	0/0:58:58,0:58:2067:0:0:0,-17.4597,-186.3	0/1:23:9,14:9:324:14:500:-38.4125,0,-22.5822	0/0:152:152,0:152:5414:0:0:0,-45.7566,-487.392	0/1:64:31,33:31:1108:33:1152:-84.7174,0,-80.7651	0/1:194:105,89:105:3726:89:3184:-228.384,0,-277.143	0/1:131:58,73:58:2061:73:2616:-196.253,0,-146.324	0/1:113:51,62:51:1819:62:2216:-165.688,0,-129.974	0/0:57:57,0:57:2008:0:0:0,-17.1587,-180.991	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/1:71:27,44:27:968:44:1572:-120.398,0,-66.0642	0/0:119:119,0:119:4213:0:0:0,-35.8226,-379.351	0/0:136:135,1:135:4833:1:36:0,-37.3418,-431.524	0/1:44:30,14:30:1076:14:482:-30.4607,0,-83.9075	0/0:78:78,0:78:2780:0:0:0,-23.4803,-250.442	0/1:40:17,23:17:593:23:824:-62.4421,0,-41.6535	0/0:123:123,0:123:4366:0:0:0,-37.0267,-393.114	0/1:20:15,5:15:540:5:176:-10.1644,0,-42.9159	0/1:71:40,31:40:1423:31:1061:-74.419,0,-106.994	0/1:82:37,45:37:1328:45:1591:-118.795,0,-95.1378	0/1:56:30,26:30:1068:26:923:-66.5291,0,-79.5744	0/1:125:62,63:62:2219:63:2239:-164.145,0,-162.345	0/1:73:29,44:29:1035:44:1559:-118.625,0,-71.4879	0/0:127:127,0:127:4521:0:0:0,-38.2308,-407.059	0/0:71:71,0:71:2531:0:0:0,-21.3731,-228.041
chr03	29103838	.	A	G	122017	PASS	AB=0.486212;ABP=13.7292;AC=134;AF=0.712766;AN=188;AO=8870;CIGAR=1X;DP=12221;DPB=12221;DPRA=0;EPP=19255.3;EPPR=7270.93;GTI=0;LEN=1;MEANALT=1.04255;MQM=28.84;MQMR=56.1321;NS=94;NUMALT=1;ODDS=11.8148;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316765;QR=119378;RO=3347;RPL=0;RPP=19264;RPPR=7270.93;RPR=8870;RUN=1;SAF=8869;SAP=19255.3;SAR=1;SRF=3347;SRP=7270.93;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:28,25:28:989:25:892:-41.9338,0,-73.2595	0/1:217:119,98:119:4231:98:3486:-160.135,0,-314.83	0/1:159:85,74:85:3044:74:2649:-122.606,0,-224.522	1/1:288:1,287:1:36:287:10275:-732.836,-83.0988,0	0/1:111:40,71:40:1421:71:2552:-140.377,0,-94.7052	0/1:89:48,41:48:1690:41:1467:-67.5219,0,-125.228	0/1:202:116,86:116:4153:86:3073:-159.784,0,-312.94	0/1:272:140,132:140:5032:132:4733:-221.74,0,-369.491	0/1:140:82,58:82:2944:58:2084:-91.6961,0,-220.84	0/1:149:77,72:77:2742:72:2554:-139.468,0,-201.528	0/1:78:47,31:47:1692:31:1073:-54.1637,0,-128.786	0/1:82:37,45:37:1328:45:1620:-78.7586,0,-94.9493	0/1:70:37,33:37:1309:33:1180:-54.4998,0,-96.5674	1/1:119:0,119:0:0:119:4238:-290.938,-35.8226,0	0/1:66:40,26:40:1440:26:931:-46.1422,0,-109.446	0/1:53:24,29:24:845:29:1029:-53.681,0,-60.3708	0/1:77:40,37:40:1440:37:1332:-62.9957,0,-106.443	1/1:76:0,76:0:0:76:2717:-175.266,-22.8783,0	0/1:46:21,25:21:756:25:900:-43.2944,0,-54.2622	1/1:235:0,235:0:0:235:8367:-601.581,-70.7421,0	1/1:182:0,182:0:0:182:6437:-441.834,-54.7875,0	1/1:170:0,170:0:0:170:6104:-460.665,-51.1751,0	0/1:132:73,59:73:2560:59:2082:-111.429,0,-190.858	0/1:163:85,78:85:3022:78:2793:-142.07,0,-222.441	1/1:92:0,92:0:0:92:3281:-225.427,-27.6948,0	0/1:486:254,232:254:8999:232:8270:-477.217,0,-661.013	1/1:267:1,266:1:36:266:9519:-646.831,-76.7784,0	0/1:44:21,23:21:756:23:828:-42.8405,0,-55.0101	1/1:404:0,404:0:0:404:14412:-1089,-121.616,0	0/1:207:96,111:96:3376:111:3984:-210.116,0,-239.9	1/1:205:0,205:0:0:205:7291:-521.962,-61.7112,0	1/1:18:0,18:0:0:18:648:-44.4394,-5.41854,0	0/1:38:22,16:22:777:16:576:-28.0749,0,-58.3774	1/1:7:0,7:0:0:7:252:-16.2918,-2.10721,0	1/1:25:0,25:0:0:25:877:-57.2676,-7.52575,0	1/1:23:0,23:0:0:23:828:-53.3024,-6.92369,0	1/1:227:0,227:0:0:227:8119:-608.889,-68.3338,0	0/1:277:123,154:123:4416:154:5471:-293.148,0,-313.321	0/1:78:42,36:42:1504:36:1296:-59.3209,0,-112.006	0/1:16:7,9:7:248:9:324:-17.4587,0,-17.7806	0/1:164:78,86:78:2808:86:3088:-160.963,0,-203.239	1/1:43:0,43:0:0:43:1533:-104.376,-12.9443,0	1/1:172:0,172:0:0:172:6093:-418.027,-51.7772,0	1/1:68:0,68:0:0:68:2440:-174.603,-20.47,0	1/1:69:0,69:0:0:69:2476:-178.574,-20.7711,0	1/1:218:2,216:2:72:216:7665:-571.334,-58.7878,0	0/1:155:69,86:69:2450:86:3051:-150.132,0,-173.399	1/1:246:0,246:0:0:246:8750:-619.813,-74.0534,0	1/1:137:1,136:1:36:136:4854:-345.39,-37.7866,0	1/1:161:0,160:0:0:160:5726:-410.793,-48.1648,0	0/1:191:108,82:108:3861:82:2947:-164.087,0,-290.099	1/1:21:0,21:0:0:21:756:-55.1525,-6.32163,0	0/1:191:94,97:94:3380:97:3454:-164.834,0,-246.103	0/1:81:40,41:40:1410:41:1468:-86.0671,0,-102.659	0/1:29:16,13:16:576:13:468:-21.2036,0,-43.3914	1/1:113:0,113:0:0:113:4041:-276.255,-34.0164,0	0/1:56:25,31:25:900:31:1091:-61.3872,0,-64.2609	1/1:14:0,14:0:0:14:504:-38.0675,-4.21442,0	0/1:45:29,16:29:1029:16:568:-30.2242,0,-79.3743	0/1:98:50,48:50:1796:48:1705:-87.7077,0,-131.64	0/1:165:83,82:83:2961:82:2917:-156.061,0,-216.695	0/1:11:8,3:8:273:3:108:-4.81641,0,-21.586	1/1:290:1,289:1:36:289:10328:-773.899,-83.7004,0	1/1:241:5,236:5:180:236:8461:-582.212,-55.9994,0	1/1:69:0,69:0:0:69:2480:-168.174,-20.7711,0	0/1:130:67,63:67:2385:63:2260:-121.147,0,-175.571	1/1:205:1,204:1:36:204:7284:-514.062,-58.1133,0	0/1:159:99,60:99:3545:60:2141:-106.682,0,-270.994	1/1:25:0,25:0:0:25:896:-61.5248,-7.52575,0	0/1:125:60,65:60:2141:65:2302:-111.251,0,-154.793	1/1:97:0,97:0:0:97:3477:-259.401,-29.1999,0	0/1:39:21,18:21:756:18:644:-34.4529,0,-56.2631	1/1:165:0,165:0:0:165:5928:-381.091,-49.67,0	0/1:67:43,24:43:1535:24:860:-35.562,0,-117.407	0/1:292:146,146:146:5188:146:5190:-268.513,0,-378.689	0/1:228:106,122:106:3797:122:4384:-246.476,0,-272.661	0/1:167:86,81:86:3039:81:2893:-137.534,0,-220.965	1/1:126:0,124:0:0:124:4441:-286.188,-37.3277,0	0/1:14:5,9:5:180:9:324:-16.767,0,-12.2901	0/1:122:63,59:63:2264:59:2109:-107.779,0,-167.108	1/1:145:0,145:0:0:145:5148:-333.068,-43.6494,0	1/1:311:0,311:0:0:311:11134:-797.034,-93.6203,0	0/1:132:69,63:69:2461:63:2249:-123.125,0,-181.901	1/1:75:0,75:0:0:75:2692:-192.164,-22.5773,0	0/1:100:51,49:51:1836:49:1764:-97.205,0,-134.951	1/1:131:1,130:1:36:130:4635:-328.433,-35.8371,0	0/1:47:26,21:26:936:21:747:-34.3229,0,-70.1292	0/1:84:42,42:42:1512:42:1512:-71.4851,0,-110.72	0/1:47:26,21:26:936:21:756:-34.0399,0,-70.0974	0/1:57:26,31:26:936:31:1112:-58.81,0,-66.5037	0/1:112:50,62:50:1755:62:2228:-118.093,0,-124.259	0/1:78:44,34:44:1550:34:1215:-64.066,0,-115.51	1/1:152:0,152:0:0:152:5445:-391.149,-45.7566,0	1/1:98:0,98:0:0:98:3479:-251.41,-29.5009,0
chr03	29103871	.	AGTAC	TGTAT,AGTAT	196139	PASS	AB=0.487366,0.510308;ABP=11.9537,8.9646;AC=134,54;AF=0.712766,0.287234;AN=188;AO=8852,3313;CIGAR=1X3M1X,4M1X;DP=12203;DPB=12206;DPRA=0,1.18022;EPP=19224.9,7197.1;EPPR=7.35324;GTI=0;LEN=5,1;MEANALT=2.06383,2.27941;MQM=28.8172,56.1464;MQMR=60;NS=94;NUMALT=2;ODDS=11.2023;PAIRED=0,0;PAIREDR=0;PAO=15,0;PQA=504,0;PQR=0;PRO=0;QA=309634,118098;QR=72;RO=2;RPL=8852,3313;RPP=19224.9,7197.1;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=8852,3313;SAP=19224.9,7197.1;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:54:0,26,28:0:0:26,28:896,981:-131.59,-79.9726,-72.1458,-51.9172,0,-43.4883	1/2:216:0,97,119:0:0:97,119:3399,4263:-539.66,-347.301,-318.101,-192.66,0,-156.837	1/2:155:0,73,82:0:0:73,82:2553,2935:-383.065,-237.974,-215.998,-145.393,0,-120.709	1/1:290:0,288,2:0:0:288,2:10102,72:-733.74,-86.6966,0,-727.971,-80.8268,-727.368	1/2:112:0,71,41:0:0:71,41:2472,1457:-269.284,-119.005,-97.632,-150.602,0,-138.26	1/2:87:0,41,46:0:0:41,46:1450,1638:-214.842,-133.127,-120.784,-82.0172,0,-68.1698	1/2:203:1,84,118:1:36:84,118:2944,4195:-526.871,-338.674,-316.325,-185.514,0,-152.931	1/2:263:0,128,134:0:0:128,134:4468,4740:-638.039,-384.844,-346.312,-253.223,0,-212.885	1/2:139:0,58,81:0:0:58,81:2050,2888:-349.186,-233.584,-216.124,-115.899,0,-91.5153	1/2:148:0,71,76:0:0:71,76:2442,2710:-378.845,-219.979,-198.606,-158.934,0,-136.056	1/2:78:0,31,47:0:0:31,47:1074,1679:-205.649,-137.035,-127.703,-68.9241,0,-54.7757	1/2:82:0,45,37:0:0:45,37:1552,1328:-196.937,-108.496,-94.9493,-88.752,0,-77.6139	1/2:71:0,34,37:0:0:34,37:1205,1319:-174.518,-107.339,-97.104,-67.4807,0,-56.3426	1/1:121:0,120,1:0:0:120,1:4194,32:-291.641,-36.1236,0,-289.433,-33.6369,-289.132	1/2:66:0,26,40:0:0:26,40:902,1428:-173.379,-116.413,-108.586,-57.2745,0,-45.2333	1/2:52:0,29,23:0:0:29,23:1012,820:-127.809,-67.1542,-58.4243,-60.9712,0,-54.0475	1/2:75:0,36,39:0:0:36,39:1248,1396:-185.066,-113.668,-102.831,-71.4344,0,-59.6942	1/1:75:0,74,0:0:0:74,0:2580,0:-168.463,-22.2762,0,-168.463,-22.2762,-168.463	1/2:47:0,25,22:0:0:25,22:887,783:-113.106,-63.9122,-56.3865,-49.5002,0,-42.8776	1/1:238:0,238,0:0:0:238,0:8284,0:-603.313,-71.6451,0,-603.313,-71.6451,-603.313	1/1:182:0,181,0:0:0:181,0:6246,0:-436.273,-54.4864,0,-436.273,-54.4864,-436.273	1/1:171:0,170,0:0:0:170,0:5938,0:-454.095,-51.1751,0,-454.095,-51.1751,-454.095	1/2:128:0,57,70:0:0:57,70:1981,2511:-332.889,-204.849,-187.69,-128.091,0,-107.018	1/2:164:0,78,85:0:0:78,85:2714,3036:-412.808,-247.328,-223.848,-165.534,0,-139.947	1/1:91:0,89,0:0:0:89,0:3127,0:-217.207,-26.7917,0,-217.207,-26.7917,-217.207	1/2:480:0,232,246:0:0:232,246:8082,8736:-1258.43,-711.274,-641.435,-547.181,0,-473.128	1/1:268:0,267,1:0:0:267,1:9366,36:-649.773,-80.375,0,-646.836,-77.0795,-646.535	1/2:44:0,23,21:0:0:23,21:789,756:-109.76,-61.9338,-55.0101,-48.1408,0,-41.8192	1/1:408:0,405,0:0:0:405,0:14121,0:-1081.6,-121.917,0,-1081.6,-121.917,-1081.6	1/2:209:0,112,96:0:0:112,96:3920,3427:-516.675,-278.533,-244.818,-238.137,0,-209.238	1/1:207:0,206,1:0:0:206,1:7213,36:-520.723,-62.0122,0,-517.83,-58.7647,-517.529	1/1:19:0,19,0:0:0:19,0:662,0:-46.473,-5.71957,0,-46.473,-5.71957,-46.473	1/2:37:0,16,21:0:0:16,21:565,756:-95.8423,-61.6117,-56.7953,-34.5392,0,-28.2176	1/1:7:0,7,0:0:0:7,0:244,0:-16.1927,-2.10721,0,-16.1927,-2.10721,-16.1927	1/1:24:0,24,0:0:0:24,0:831,0:-54.7865,-7.22472,0,-54.7865,-7.22472,-54.7865	1/1:24:0,24,0:0:0:24,0:838,0:-55.3066,-7.22472,0,-55.3066,-7.22472,-55.3066	1/1:231:0,230,0:0:0:230,0:8038,0:-611.406,-69.2369,0,-611.406,-69.2369,-611.406	1/2:278:0,153,124:0:0:153,124:5332,4424:-685.416,-360.131,-314.073,-325.394,0,-288.067	1/2:80:0,35,44:0:0:35,44:1227,1541:-193.773,-125.307,-114.771,-68.5486,0,-55.3033	1/2:15:0,9,6:0:0:9,6:322,216:-37.1935,-17.9749,-15.2657,-19.5429,0,-17.7367	1/2:168:0,90,78:0:0:90,78:3167,2788:-418.577,-227.406,-200.313,-191.487,0,-168.007	1/1:43:0,43,0:0:0:43,0:1502,0:-103.857,-12.9443,0,-103.857,-12.9443,-103.857	1/1:172:0,172,0:0:0:172,0:6023,0:-417.683,-51.7772,0,-417.683,-51.7772,-417.683	1/1:69:0,67,1:0:0:67,1:2336,36:-170.255,-20.169,0,-167.806,-17.6806,-167.505	1/1:72:0,72,0:0:0:72,0:2515,0:-184.553,-21.6742,0,-184.553,-21.6742,-184.553	1/1:218:0,214,2:0:0:214,2:7514,72:-571.591,-64.4204,0,-565.716,-58.5015,-565.114	1/2:153:0,85,68:0:0:85,68:2981,2429:-366.319,-197.534,-171.946,-168.805,0,-148.335	1/1:246:0,244,0:0:0:244,0:8550,0:-613.101,-73.4513,0,-613.101,-73.4513,-613.101	1/1:137:0,136,1:0:0:136,1:4769,36:-346.518,-40.9401,0,-343.625,-38.0062,-343.324	1/1:163:0,162,0:0:0:162,0:5694,0:-413.867,-48.7669,0,-413.867,-48.7669,-413.867	1/2:189:0,85,104:0:0:85,104:2954,3698:-501.217,-301.588,-276,-199.951,0,-168.644	1/1:21:0,21,0:0:0:21,0:729,0:-54.323,-6.32163,0,-54.323,-6.32163,-54.323	1/2:191:0,97,94:0:0:97,94:3396,3363:-466.019,-273.765,-244.565,-192.56,0,-164.263	1/2:81:0,43,36:0:0:43,36:1495,1283:-205.987,-104.575,-91.6307,-101.386,0,-90.5485	1/2:29:0,13,16:0:0:13,16:449,576:-72.7424,-47.3048,-43.3914,-25.7374,0,-20.9209	1/1:112:0,112,0:0:0:112,0:39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chr04	383615	.	GTA	GA	67408.2	PASS	AB=0.609206;ABP=1193.45;AC=102;AF=0.542553;AN=188;AO=7235;CIGAR=1M1D1M;DP=11761;DPB=9345.67;DPRA=0;EPP=15540.4;EPPR=289.964;GTI=13;LEN=1;MEANALT=1.14894;MQM=26.6807;MQMR=22.0027;NS=94;NUMALT=1;ODDS=0.209041;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=256105;QR=158996;RO=4510;RPL=0;RPP=15713.6;RPPR=9796.35;RPR=7235;RUN=1;SAF=7215;SAP=15540.4;SAR=20;SRF=2641;SRP=289.964;SRR=1869;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:97:26,71:26:912:71:2491:-134.317,0,-21.5026	0/1:109:49,60:49:1681:60:2102:-84.1876,0,-53.6208	0/1:244:101,143:101:3568:143:5038:-202.877,0,-134.089	0/1:194:58,136:58:2050:136:4842:-292.868,0,-52.5126	0/1:117:30,87:30:1058:87:3074:-177.527,0,-27.9936	0/1:53:21,32:21:748:32:1140:-59.0646,0,-17.3359	0/1:86:49,37:49:1737:37:1320:-74.1637,0,-60.1434	0/1:226:64,162:64:2254:162:5709:-245.692,0,-38.3817	0/1:135:39,96:39:1351:96:3398:-192.46,0,-22.991	0/1:117:46,71:46:1592:71:2529:-145.495,0,-61.956	0/1:140:85,54:85:3012:54:1932:-81.9185,0,-110.597	0/1:210:128,82:128:4491:82:2924:-137.333,0,-175.698	0/1:138:77,61:77:2747:61:2134:-74.8321,0,-82.6907	0/1:147:93,54:93:3284:54:1924:-70.3938,0,-141.631	0/1:141:61,80:61:2180:80:2853:-136.779,0,-68.4372	0/1:132:67,65:67:2375:65:2320:-116.35,0,-75.4127	0/1:115:89,26:89:3138:26:932:-14.8883,0,-101.796	0/1:106:83,22:83:2947:22:775:-11.0779,0,-91.9253	0/1:84:59,25:59:2094:25:862:-29.6693,0,-55.5152	0/1:197:56,141:56:1973:141:4953:-292.619,0,-51.2096	0/1:159:29,130:29:1035:130:4607:-266.149,0,-6.30372	0/1:87:16,71:16:542:71:2503:-146.274,0,-12.7235	0/1:102:23,79:23:795:79:2778:-163.856,0,-21.0376	0/1:97:30,67:30:1053:67:2381:-116.687,0,-31.297	0/1:88:20,68:20:701:68:2405:-138.113,0,-7.3469	0/1:253:65,188:65:2282:188:6656:-380.891,0,-50.7332	0/1:245:51,194:51:1808:194:6858:-396.681,0,-18.1292	0/1:86:48,38:48:1712:38:1356:-60.5764,0,-69.8744	0/1:325:76,248:76:2653:248:8746:-501.907,0,-35.6785	0/1:86:32,54:32:1124:54:1886:-92.3082,0,-34.4216	0/1:119:40,79:40:1413:79:2825:-144.198,0,-56.4083	1/1:10:0,10:0:0:10:356:-21.5653,-3.0103,0	0/1:16:4,12:4:144:12:428:-23.1539,0,-0.991332	0/1:8:2,6:2:64:6:197:-8.83649,0,-0.328121	1/1:19:3,16:3:108:16:568:-26.4525,-1.52889,0	1/1:12:2,10:2:72:10:356:-21.5076,-0.864945,0	0/1:371:195,175:195:6909:175:6249:-313.253,0,-356.401	1/1:87:10,76:10:328:76:2705:-157.258,-6.81977,0	0/1:130:97,33:97:3394:33:1184:-36.4571,0,-116.843	1/1:7:1,6:1:36:6:216:-14.8137,-0.709833,0	0/1:164:48,116:48:1653:116:4068:-196.223,0,-45.4255	0/1:67:40,27:40:1419:27:968:-38.0044,0,-50.1596	0/1:222:50,171:50:1770:171:6040:-334.238,0,-37.6774	0/1:119:76,43:76:2671:43:1544:-72.6579,0,-129.622	0/1:138:81,57:81:2831:57:2025:-88.9096,0,-139.085	0/1:100:20,80:20:690:80:2833:-182.667,0,-10.7226	0/1:162:33,129:33:1158:129:4529:-198.58,0,-12.533	0/1:234:43,191:43:1497:191:6756:-363.687,0,-11.4852	0/1:89:24,65:24:809:65:2272:-134.61,0,-18.599	0/1:150:36,114:36:1270:114:4050:-239.754,0,-30.079	0/1:138:57,80:57:2014:80:2792:-173.071,0,-99.6712	1/1:20:2,18:2:72:18:640:-35.936,-2.15206,0	0/1:114:37,77:37:1302:77:2768:-138.254,0,-22.9968	0/1:54:15,39:15:528:39:1388:-93.3841,0,-21.5595	0/1:7:5,2:5:165:2:72:-2.04078,0,-5.66535	0/1:165:38,127:38:1331:127:4519:-222.601,0,-31.7351	0/1:45:12,32:12:432:32:1132:-73.8365,0,-6.346	0/1:13:2,11:2:72:11:396:-22.9459,0,-1.75004	0/1:23:6,17:6:214:17:597:-36.0001,0,-4.31626	0/1:91:25,66:25:873:66:2348:-128.491,0,-24.5626	0/1:194:113,81:113:3998:81:2854:-125.683,0,-147.71	1/1:11:0,11:0:0:11:388:-29.1959,-3.31133,0	0/1:113:29,84:29:1022:84:2936:-166.275,0,-35.81	0/1:193:49,142:49:1729:142:4978:-259.93,0,-32.3261	0/1:76:16,60:16:562:60:2086:-116.28,0,-8.64637	0/1:110:21,89:21:748:89:3138:-169.14,0,-11.7568	0/1:106:32,74:32:1133:74:2632:-152.459,0,-42.0629	0/1:151:54,96:54:1903:96:3397:-168.37,0,-53.6879	0/1:87:50,37:50:1775:37:1324:-62.1819,0,-74.597	0/1:56:26,30:26:926:30:1064:-56.3607,0,-21.7329	0/1:136:104,32:104:3670:32:1152:-37.6367,0,-203.243	0/1:37:13,24:13:458:24:829:-41.916,0,-18.9275	1/1:103:16,87:16:559:87:3104:-140.131,-1.87049,0	0/1:129:27,102:27:966:102:3583:-158.627,0,-1.50053	0/1:172:60,112:60:2132:112:3959:-183.766,0,-57.2153	0/1:199:41,158:41:1445:158:5604:-299.763,0,-35.8563	0/1:155:46,109:46:1622:109:3858:-225.108,0,-35.8485	0/1:134:36,98:36:1269:98:3440:-180.854,0,-16.076	0/1:20:6,14:6:216:14:485:-28.7191,0,-3.18463	0/1:148:49,99:49:1739:99:3541:-195.016,0,-55.1783	0/1:105:20,85:20:712:85:3006:-163.43,0,-5.94869	0/1:312:43,267:43:1520:267:9427:-507.991,0,-7.19917	0/1:165:123,42:123:4369:42:1504:-47.3711,0,-166.779	0/1:125:62,63:62:2212:63:2248:-105.04,0,-97.6094	0/1:139:82,57:82:2896:57:2003:-84.0881,0,-134.236	0/1:275:152,123:152:5353:123:4373:-224.4,0,-250.898	0/1:42:23,19:23:814:19:684:-30.9581,0,-22.1239	0/1:142:80,61:80:2844:61:2165:-102.659,0,-102.453	0/1:136:71,65:71:2510:65:2324:-118.236,0,-84.1439	0/1:61:43,17:43:1539:17:604:-25.3484,0,-51.7415	0/1:158:91,67:91:3196:67:2396:-110.543,0,-104.166	0/1:130:59,71:59:2069:71:2520:-143.69,0,-63.9838	0/1:132:32,100:32:1110:100:3538:-188.974,0,-34.5344	0/1:299:166,132:166:5844:132:4712:-213.298,0,-279.307
chr04	383636	.	G	A	81016.8	PASS	AB=0.625805;ABP=1604.4;AC=104;AF=0.553191;AN=188;AO=7716;CIGAR=1X;DP=12142;DPB=12142;DPRA=0;EPP=16602.1;EPPR=7624.75;GTI=15;LEN=1;MEANALT=1.01064;MQM=26.5216;MQMR=22.0016;NS=94;NUMALT=1;ODDS=1.27086;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276656;QR=158049;RO=4425;RPL=7499;RPP=14926.3;RPPR=739.409;RPR=217;RUN=1;SAF=7495;SAP=14893.5;SAR=221;SRF=2587;SRP=278.309;SRR=1838;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:100:25,75:25:875:75:2673:-142.005,0,-18.1261	0/1:108:47,61:47:1680:61:2196:-87.4431,0,-50.8673	0/1:248:96,152:96:3411:152:5452:-219.884,0,-123.955	0/1:198:55,143:55:1963:143:5120:-310.156,0,-44.4603	0/1:121:29,92:29:1021:92:3289:-187.285,0,-24.479	0/1:54:21,33:21:752:33:1180:-61.597,0,-17.0708	0/1:86:48,38:48:1720:38:1364:-76.7365,0,-58.4238	0/1:235:65,170:65:2327:170:6116:-259.903,0,-39.1927	0/1:143:38,105:38:1355:105:3773:-210.611,0,-18.7995	0/1:119:45,74:45:1612:74:2656:-152.205,0,-60.4336	0/1:141:85,56:85:3019:56:2008:-86.0148,0,-111.744	0/1:210:124,86:124:4403:86:3084:-146.955,0,-168.085	0/1:141:76,65:76:2720:65:2338:-82.2088,0,-80.5973	0/1:149:92,57:92:3300:57:2052:-75.1366,0,-139.82	0/1:145:62,83:62:2186:83:2980:-143.366,0,-70.3327	0/1:137:67,70:67:2404:70:2500:-124.255,0,-74.5331	0/1:115:88,27:88:3139:27:972:-16.8753,0,-100.548	0/1:107:83,24:83:2963:24:851:-13.8756,0,-92.5875	0/1:83:58,25:58:2084:25:900:-30.8821,0,-54.5912	0/1:199:56,143:56:2008:143:5140:-299.265,0,-51.5062	0/1:167:28,139:28:1004:139:4988:-284.7,0,-1.6123	0/1:91:16,75:16:572:75:2684:-155.708,0,-13.0055	0/1:106:22,84:22:788:84:3024:-177.166,0,-18.7985	0/1:99:30,69:30:1076:69:2480:-120.875,0,-30.9589	0/1:92:21,71:21:752:71:2540:-144.195,0,-8.3013	0/1:261:63,198:63:2246:198:7099:-401.098,0,-44.0577	0/1:251:51,200:51:1832:200:7172:-412.056,0,-16.488	0/1:87:48,39:48:1716:39:1404:-61.8875,0,-69.5735	0/1:330:72,258:72:2588:258:9283:-529.13,0,-27.7893	0/1:90:30,60:30:1076:60:2142:-106.125,0,-29.7754	0/1:119:39,80:39:1392:80:2876:-146.242,0,-53.3721	1/1:10:0,10:0:0:10:360:-21.5991,-3.0103,0	1/1:26:4,22:4:144:22:788:-42.1093,-2.01897,0	0/1:8:2,6:2:72:6:216:-9.15132,0,-0.341107	1/1:19:3,16:3:108:16:576:-26.4965,-1.52889,0	1/1:32:2,30:2:72:30:1076:-60.3471,-6.88554,0	0/1:377:191,186:191:6843:186:6688:-336.879,0,-347.015	1/1:92:11,81:11:392:81:2904:-163.93,-5.76275,0	0/1:134:96,38:96:3416:38:1364:-43.5007,0,-115.199	1/1:14:1,13:1:36:13:468:-28.4882,-2.81704,0	0/1:169:46,123:46:1627:123:4406:-209.417,0,-41.2262	0/1:65:38,27:38:1356:27:972:-38.64,0,-47.5409	0/1:234:48,186:48:1720:186:6656:-366.87,0,-29.4819	0/1:124:76,48:76:2719:48:1720:-80.1766,0,-127.947	0/1:133:78,55:78:2736:55:1980:-85.421,0,-132.486	0/1:99:16,83:16:576:83:2967:-193.52,0,-3.63578	0/1:163:32,131:32:1140:131:4700:-204.243,0,-10.4588	0/1:240:39,201:39:1392:201:7186:-385.609,0,-4.25221	0/1:94:23,71:23:828:71:2539:-148.525,0,-17.1826	0/1:152:35,117:35:1251:117:4204:-247.695,0,-27.3476	0/1:142:57,85:57:2040:85:3056:-186.107,0,-98.3295	1/1:37:3,34:3:99:34:1201:-69.0372,-6.13915,0	0/1:117:37,80:37:1324:80:2861:-142.964,0,-22.3178	0/1:54:14,40:14:500:40:1432:-96.003,0,-19.1808	0/1:5:3,2:3:108:2:72:-2.64284,0,-2.68553	0/1:170:37,133:37:1303:133:4778:-232.972,0,-28.0279	0/1:51:12,39:12:432:39:1400:-90.371,0,-4.47188	0/1:15:2,13:2:72:13:468:-27.2697,0,-1.14798	0/1:28:7,21:7:244:21:752:-45.2913,0,-3.95543	0/1:94:24,70:24:860:70:2514:-136.793,0,-21.9804	0/1:198:110,88:110:3948:88:3168:-141.701,0,-142.14	1/1:19:1,18:1:36:18:648:-41.4713,-4.72055,0	0/1:117:29,88:29:1027:88:3168:-176.556,0,-33.6517	0/1:201:47,154:47:1688:154:5504:-283.601,0,-26.4021	0/1:80:16,64:16:576:64:2296:-124.899,0,-7.98071	0/1:113:21,92:21:748:92:3285:-175.812,0,-10.7876	0/1:115:31,84:31:1090:84:3008:-171.185,0,-36.8792	0/1:156:54,102:54:1936:102:3664:-180.37,0,-55.1221	0/1:94:51,43:51:1820:43:1544:-72.9397,0,-74.0959	0/1:60:26,34:26:936:34:1205:-65.9914,0,-20.5545	0/1:136:101,35:101:3611:35:1256:-42.0858,0,-197.47	0/1:36:13,23:13:464:23:820:-40.9268,0,-19.2538	1/1:108:16,92:16:576:92:3308:-147.526,-3.10974,0	1/1:136:26,110:26:932:110:3948:-172.41,-1.84235,0	0/1:179:58,121:58:2080:121:4329:-200.624,0,-51.4458	0/1:201:40,161:40:1440:161:5761:-304.605,0,-34.9813	0/1:160:44,116:44:1580:116:4157:-242.936,0,-30.9671	0/1:133:34,99:34:1220:99:3543:-184.771,0,-13.1422	0/1:28:6,22:6:216:22:783:-42.6876,0,-0.776388	0/1:154:47,107:47:1679:107:3847:-209.493,0,-49.4899	0/1:108:21,87:21:756:87:3114:-167.824,0,-7.02656	0/1:317:42,275:42:1512:275:9857:-525.147,0,-3.08924	0/1:165:121,44:121:4304:44:1584:-52.0774,0,-163.27	0/1:124:60,63:60:2160:63:2264:-106.122,0,-95.4506	0/1:138:80,58:80:2872:58:2088:-88.8945,0,-131.616	0/1:280:152,128:152:5407:128:4585:-235.175,0,-249.792	0/1:43:23,20:23:824:20:720:-32.6202,0,-21.8208	0/1:144:79,65:79:2809:65:2332:-109.774,0,-98.7374	0/1:140:69,71:69:2476:71:2551:-131.298,0,-78.1903	0/1:66:44,22:44:1580:22:788:-32.2126,0,-52.397	0/1:180:93,87:93:3308:87:3093:-145.294,0,-103.398	0/1:136:58,78:58:2076:78:2789:-158.69,0,-61.5353	0/1:142:33,109:33:1172:109:3894:-206.327,0,-31.3765	0/1:305:162,143:162:5796:143:5115:-235.227,0,-271.027
chr04	383641	.	CAAACAAG	CAACAAG	27312.4	PASS	AB=0.472679;ABP=75.9828;AC=91;AF=0.484043;AN=188;AO=5402;CIGAR=1M1D6M;DP=11737;DPB=11061.6;DPRA=0;EPP=11594.7;EPPR=2321.56;GTI=23;LEN=1;MEANALT=1.32979;MQM=25.077;MQMR=24.9721;NS=94;NUMALT=1;ODDS=0.0056172;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=134969;QR=221179;RO=6302;RPL=5362;RPP=11388.4;RPPR=12259.1;RPR=40;RUN=1;SAF=5346;SAP=11251.9;SAR=56;SRF=4281;SRP=1762.93;SRR=2021;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:96:62,34:62:2179:34:748:-29.4416,0,-119.034	0/1:108:50,58:50:1723:58:1286:-67.891,0,-55.8105	0/1:231:96,134:96:3364:134:2984:-163.317,0,-127.346	0/1:194:133,61:133:4686:61:1581:-67.625,0,-266.405	0/1:117:77,38:77:2735:38:906:-36.6363,0,-158.691	0/1:53:36,17:36:1256:17:374:-13.3107,0,-59.6387	0/1:85:71,13:71:2513:13:338:-1.52063,0,-125.138	0/1:216:68,148:68:2374:148:3260:-188.991,0,-52.1026	0/1:137:97,39:97:3411:39:868:-26.5757,0,-184.079	0/1:115:75,39:75:2628:39:1012:-46.217,0,-147.111	0/1:139:86,53:86:3010:53:1384:-68.822,0,-113.719	0/0:209:181,27:181:6321:27:594:0,-16.5419,-337.646	0/1:129:77,51:77:2710:51:1132:-49.4529,0,-83.7454	0/1:146:92,53:92:3253:53:1266:-55.9611,0,-140.452	0/1:139:62,77:62:2176:77:1979:-116.114,0,-73.1843	0/1:137:97,40:97:3419:40:969:-35.5674,0,-153.27	0/1:111:89,22:89:3123:22:484:-4.40248,0,-102.891	0/1:104:84,20:84:2965:20:440:-3.08908,0,-94.6342	0/1:84:67,17:67:2356:17:374:-3.97875,0,-77.5458	0/1:192:122,70:122:4306:70:1803:-85.8838,0,-237.74	0/1:164:87,77:87:3072:77:1873:-99.1881,0,-163.575	0/1:87:15,72:15:524:72:2000:-134.882,0,-10.8865	0/1:102:60,42:60:2125:42:1099:-57.5128,0,-123.885	0/1:95:36,59:36:1277:59:1412:-82.7536,0,-48.7795	0/1:89:54,33:54:1890:33:790:-35.9012,0,-98.0345	0/1:247:66,181:66:2323:181:5036:-330.59,0,-53.531	0/1:243:153,90:153:5421:90:2174:-98.5198,0,-296.071	0/1:82:59,22:59:2077:22:525:-16.8789,0,-101.325	0/1:324:76,247:76:2678:247:6897:-458.02,0,-36.3231	0/1:86:44,42:44:1525:42:1026:-55.5022,0,-66.6957	0/1:113:40,73:40:1375:73:1917:-119.005,0,-56.0418	1/1:10:0,10:0:0:10:240:-19.1085,-3.0103,0	0/1:25:17,8:17:588:8:192:-7.80305,0,-26.7416	0/1:7:2,5:2:71:5:110:-6.63436,0,-0.641494	1/1:15:3,12:3:108:12:262:-16.3421,-0.324768,0	0/0:34:29,5:29:972:5:110:0,-1.49345,-50.1797	0/1:366:192,172:192:6746:172:4797:-276.152,0,-349.72	0/1:91:41,49:41:1438:49:1168:-64.798,0,-73.0479	0/0:136:116,20:116:4037:20:439:0,-6.59159,-169.178	0/0:14:12,2:12:414:2:48:0,-0.224733,-22.3013	0/1:158:48,110:48:1686:110:2657:-162.697,0,-47.4373	0/1:65:40,25:40:1407:25:610:-29.0351,0,-50.6339	0/1:231:131,99:131:4572:99:2363:-116.71,0,-247.433	0/1:123:94,29:94:3314:29:741:-22.0484,0,-178.215	0/1:129:78,51:78:2700:51:1334:-68.1759,0,-133.177	0/1:103:57,45:57:2002:45:1249:-69.4782,0,-118.582	0/1:150:34,116:34:1177:116:2565:-154.765,0,-18.6699	0/1:228:45,183:45:1564:183:4742:-309.216,0,-17.405	0/1:91:50,41:50:1763:41:1070:-58.3183,0,-93.1031	0/1:151:79,72:79:2816:72:1884:-104.865,0,-152.919	0/1:142:98,42:98:3417:42:1170:-52.1416,0,-216.01	0/1:34:18,16:18:606:16:411:-22.6984,0,-26.6548	0/1:111:61,50:61:2149:50:1110:-53.192,0,-92.5193	0/1:52:39,13:39:1384:13:362:-13.657,0,-94.8205	0/1:7:5,2:5:168:2:44:-1.50344,0,-5.72684	0/1:167:39,127:39:1338:127:3047:-190.075,0,-34.2133	0/1:48:39,9:39:1376:9:234:-4.40659,0,-82.1106	0/1:14:2,12:2:72:12:330:-22.484,0,-1.44901	0/1:28:15,13:15:515:13:364:-21.0631,0,-25.7461	0/1:92:63,29:63:2217:29:694:-27.1407,0,-120.898	0/1:194:113,81:113:3976:81:2087:-108.069,0,-148.184	0/1:19:15,4:15:491:4:104:-2.78864,0,-27.4777	0/1:113:46,67:46:1606:67:1855:-115.336,0,-73.5425	0/1:179:49,130:49:1706:130:3377:-215.121,0,-35.7877	0/1:76:40,36:40:1402:36:874:-46.5357,0,-73.6622	0/1:107:22,85:22:776:85:2201:-143.288,0,-14.5213	0/1:112:66,45:66:2321:45:1160:-58.8126,0,-132.557	0/1:145:55,90:55:1939:90:2323:-141.453,0,-58.9412	0/1:93:74,19:74:2603:19:456:-8.12138,0,-132.301	0/1:58:45,13:45:1570:13:286:-4.9643,0,-74.6028	0/1:135:102,31:102:3554:31:855:-28.6103,0,-197.521	0/1:34:13,21:13:453:21:523:-31.5429,0,-19.6984	0/1:95:18,77:18:635:77:1694:-103.286,0,-5.26339	0/1:120:27,93:27:957:93:2049:-123.437,0,-4.20502	0/1:166:60,106:60:2112:106:2530:-149.305,0,-58.7952	0/1:194:41,153:41:1453:153:3965:-257.899,0,-37.6867	0/1:156:117,39:117:4117:39:858:-19.9314,0,-238.273	0/1:129:75,54:75:2636:54:1188:-53.7138,0,-125.173	0/1:28:23,5:23:791:5:110:-0.312735,0,-41.434	0/1:156:100,55:100:3555:55:1309:-56.3155,0,-190.316	0/1:105:55,49:55:1940:49:1102:-54.8907,0,-103.089	0/1:288:43,245:43:1515:245:6331:-417.489,0,-13.7982	0/1:167:122,44:122:4296:44:1144:-41.023,0,-162.825	0/1:122:62,60:62:2191:60:1543:-86.1483,0,-98.3733	0/1:136:82,54:82:2871:54:1390:-69.9491,0,-135.009	0/1:278:214,64:214:7539:64:1624:-45.7232,0,-419.883	0/1:43:32,11:32:1129:11:242:-6.05913,0,-45.7154	0/1:139:110,27:110:3871:27:593:-4.72293,0,-187.227	0/1:134:111,23:111:3926:23:516:-0.0923319,0,-197.211	0/0:64:57,6:57:2007:6:141:0,-8.01539,-92.9992	0/1:182:142,38:142:4936:38:900:-16.5988,0,-219.336	0/1:137:113,24:113:3920:24:619:-8.20708,0,-204.654	0/1:133:34,99:34:1168:99:2559:-163.733,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chr04	383651	.	C	T	35535.5	PASS	AB=0.375571;ABP=1564.2;AC=84;AF=0.446809;AN=188;AO=4428;CIGAR=1X;DP=12099;DPB=12099;DPRA=12.9989;EPP=270.101;EPPR=16411.5;GTI=14;LEN=1;MEANALT=1.03226;MQM=21.9598;MQMR=26.5586;NS=94;NUMALT=1;ODDS=0.349982;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158117;QR=273526;RO=7668;RPL=4420;RPP=9548.93;RPPR=14970.2;RPR=8;RUN=1;SAF=2575;SAP=258.646;SAR=1853;SRF=7441;SRP=14740.5;SRR=227;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:100:74,26:74:2645:26:905:-20.0723,0,-141.196	0/1:108:60,48:60:2122:48:1693:-52.7728,0,-84.5785	0/1:247:149,98:149:5302:98:3501:-128.759,0,-214.689	0/1:200:145,55:145:5185:55:1957:-44.1302,0,-313.384	0/1:118:89,29:89:3185:29:1040:-25.9212,0,-182.478	0/1:54:33,21:33:1175:21:752:-17.0248,0,-61.7448	0/1:86:38,48:38:1364:48:1720:-58.1509,0,-76.9068	0/1:233:167,66:167:5965:66:2368:-42.8657,0,-253.916	0/1:141:104,37:104:3699:37:1317:-17.5488,0,-206.757	0/1:119:73,46:73:2616:46:1619:-62.333,0,-149.564	0/1:140:57,83:57:2044:83:2955:-106.923,0,-89.5557	0/1:212:86,126:86:3061:126:4521:-171.613,0,-145.341	0/1:142:65,77:65:2320:77:2768:-81.6071,0,-81.8198	0/1:147:58,89:58:2052:89:3174:-133.037,0,-78.5933	0/1:143:80,63:80:2865:63:2260:-73.4396,0,-136.807	0/1:135:70,65:70:2512:65:2336:-71.1701,0,-126.419	0/1:115:27,88:27:947:88:3121:-100.749,0,-16.7268	0/1:107:24,83:24:856:83:2980:-91.254,0,-13.8834	0/1:83:25,58:25:892:58:2087:-54.64,0,-30.6794	0/1:197:143,54:143:5132:54:1935:-47.524,0,-300.562	0/1:167:139,28:139:4984:28:1004:-1.40802,0,-285.28	0/1:93:77,16:77:2732:16:572:-12.2135,0,-158.854	0/1:103:82,21:82:2948:21:752:-18.152,0,-173.199	0/1:98:68,30:68:2444:30:1080:-31.3103,0,-118.453	0/1:94:72,22:72:2575:22:777:-9.94217,0,-145.379	0/1:259:194,65:194:6931:65:2309:-48.545,0,-392.506	0/1:246:195,51:195:6978:51:1824:-18.0187,0,-405.102	0/1:86:39,47:39:1372:47:1675:-68.2506,0,-61.8027	0/1:333:258,75:258:9196:75:2668:-32.549,0,-524.221	0/1:90:58,32:58:2068:32:1144:-33.3002,0,-102.824	0/1:118:80,38:80:2860:38:1355:-50.602,0,-146.697	0/0:10:10,0:10:360:0:0:0,-3.0103,-21.5991	0/0:26:22,4:22:788:4:144:0,-2.01897,-42.087	0/1:6:4,2:4:140:2:72:-0.943167,0,-6.24901	0/0:19:16,3:16:563:3:108:0,-1.52889,-26.4249	0/0:32:30,2:30:1072:2:61:0,-6.95313,-59.7694	0/1:370:184,186:184:6550:186:6654:-338.425,0,-334.05	0/0:92:81,11:81:2908:11:377:0,-5.94168,-166.267	0/1:134:38,96:38:1338:96:3425:-113.788,0,-44.0566	0/0:14:13,1:13:459:1:36:0,-2.81704,-28.0155	0/1:169:124,45:124:4423:45:1612:-38.0103,0,-212.629	0/1:67:27,40:27:968:40:1436:-50.23,0,-38.0044	0/1:233:183,50:183:6487:50:1772:-33.9271,0,-356.406	0/1:124:48,76:48:1715:76:2700:-128.011,0,-80.3614	0/1:132:55,77:55:1971:77:2740:-132.671,0,-86.7366	0/1:104:84,20:84:2975:20:698:-8.98843,0,-191.738	0/1:164:131,33:131:4687:33:1171:-12.001,0,-203.231	0/1:239:199,40:199:7096:40:1436:-5.96946,0,-381.213	0/1:94:70,24:70:2508:24:855:-18.3876,0,-146.218	0/1:150:116,34:116:4167:34:1224:-26.5494,0,-246.145	0/1:140:84,56:84:3020:56:2001:-96.9842,0,-185.074	0/0:36:33,3:33:1176:3:108:0,-5.825,-65.9637	0/1:117:80,37:80:2860:37:1315:-22.0897,0,-144.436	0/1:55:40,15:40:1417:15:540:-21.6856,0,-94.5322	0/1:7:2,5:2:72:5:176:-5.74997,0,-2.04078	0/1:170:133,37:133:4744:37:1315:-28.2645,0,-232.303	0/1:49:38,11:38:1347:11:392:-3.98967,0,-87.5032	0/1:15:13,2:13:459:2:72:-1.14798,0,-27.0068	0/1:26:20,6:20:705:6:216:-3.41427,0,-42.2551	0/1:88:64,24:64:2300:24:864:-23.8043,0,-130.195	0/1:199:88,110:88:3142:110:3933:-138.813,0,-141.01	0/0:18:17,1:17:590:1:36:0,-4.41952,-37.0329	0/1:119:89,30:89:3185:30:1049:-35.1355,0,-176.655	0/1:202:154,48:154:5475:48:1720:-28.5092,0,-285.146	0/1:80:65,15:65:2294:15:521:-5.70125,0,-125.385	0/1:111:90,21:90:3232:21:756:-11.505,0,-172.035	0/1:116:84,32:84:2981:32:1138:-39,0,-169.282	0/1:156:101,55:101:3600:55:1961:-56.193,0,-178.236	0/1:94:43,51:43:1544:51:1808:-73.8054,0,-72.8132	0/1:60:34,26:34:1224:26:936:-20.5545,0,-66.4749	0/1:135:32,103:32:1135:103:3682:-202.872,0,-35.8951	0/1:37:24,13:24:860:13:468:-19.0411,0,-42.6398	0/0:106:90,16:90:3203:16:576:0,-2.50768,-145.84	0/0:137:110,27:110:3885:27:972:0,-0.885007,-170.631	0/1:179:119,60:119:4244:60:2118:-54.4529,0,-195.715	0/1:202:161,40:161:5756:40:1427:-34.678,0,-305.565	0/1:158:115,43:115:4115:43:1540:-29.4401,0,-241.683	0/1:133:98,34:98:3473:34:1224:-12.0716,0,-180.565	0/1:27:21,6:21:747:6:216:-1.07742,0,-41.0875	0/1:158:109,49:109:3915:49:1754:-52.8295,0,-212.995	0/1:105:85,20:85:3047:20:720:-5.96431,0,-164.518	0/1:319:277,42:277:9883:42:1500:-2.908,0,-527.474	0/1:165:45,120:45:1607:120:4289:-161.179,0,-53.7177	0/1:125:64,61:64:2276:61:2175:-95.1847,0,-106.788	0/1:139:60,79:60:2140:79:2828:-128.822,0,-92.2744	0/1:278:129,149:129:4562:149:5325:-244.618,0,-234.728	0/1:41:19,22:19:680:22:788:-20.0806,0,-31.0782	0/1:143:65,78:65:2332:78:2783:-97.9255,0,-111.083	0/1:139:70,69:70:2474:69:2460:-79.6034,0,-126.856	0/1:67:24,43:24:864:43:1540:-49.8337,0,-37.0967	0/1:175:87,88:87:3097:88:3151:-94.5172,0,-150.284	0/1:136:78,58:78:2757:58:2080:-61.09,0,-156.499	0/1:138:107,31:107:3806:31:1108:-27.9496,0,-202.805	0/1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chr04	867361	.	G	A	39642.6	PASS	AB=0.531434;ABP=42.4629;AC=43;AF=0.228723;AN=188;AO=2469;CIGAR=1X;DP=9772;DPB=9772;DPRA=1.06451;EPP=5338.35;EPPR=15794;GTI=1;LEN=1;MEANALT=1.07843;MQM=41.2345;MQMR=54.5596;NS=94;NUMALT=1;ODDS=0.293971;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88495;QR=260595;RO=7296;RPL=3;RPP=5338.35;RPPR=15794;RPR=2466;RUN=1;SAF=2469;SAP=5364.38;SAR=0;SRF=7296;SRP=15846.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:24:24,0:24:849:0:0:0,-7.22472,-76.4587	0/0:132:132,0:132:4717:0:0:0,-39.736,-420.173	0/0:125:125,0:125:4484:0:0:0,-37.6287,-403.163	0/1:258:118,140:118:4225:140:5028:-359.811,0,-302.155	0/0:32:32,0:32:1125:0:0:0,-9.63296,-101.452	0/0:40:40,0:40:1421:0:0:0,-12.0412,-127.851	0/1:150:61,89:61:2169:89:3192:-229.786,0,-150.057	0/0:186:186,0:186:6644:0:0:0,-55.9916,-596.646	0/1:121:64,57:64:2288:57:2044:-141.716,0,-168.133	0/0:128:128,0:128:4540:0:0:0,-38.5318,-408.344	0/1:83:38,45:38:1330:45:1605:-115.187,0,-94.8559	0/0:94:94,0:94:3371:0:0:0,-28.2968,-302.857	0/1:94:50,43:50:1800:43:1544:-105.96,0,-133.729	0/0:86:86,0:86:3088:0:0:0,-25.8886,-277.444	0/1:87:40,47:40:1425:47:1677:-120.565,0,-102.25	0/1:71:32,39:32:1148:39:1404:-98.9075,0,-82.1354	0/0:75:75,0:75:2684:0:0:0,-22.5772,-241.427	0/0:83:82,0:82:2913:0:0:0,-24.6845,-261.487	0/1:43:25,18:25:881:18:648:-43.7067,0,-66.5161	0/1:107:56,51:56:1985:51:1832:-126.266,0,-146.006	0/1:152:76,76:76:2702:76:2722:-191.546,0,-197.223	0/0:110:110,0:110:3924:0:0:0,-33.1133,-351.393	0/0:125:124,1:124:4448:1:36:0,-34.1481,-395.17	0/0:127:116,11:116:4105:11:396:0,-3.50849,-333.562	0/1:53:28,25:28:1008:25:892:-62.1086,0,-74.9783	0/1:328:165,163:165:5905:163:5840:-405.036,0,-428.825	0/1:167:78,89:78:2793:89:3186:-227.307,0,-200.599	0/0:47:47,0:47:1688:0:0:0,-14.1484,-151.792	0/1:210:95,115:95:3343:115:4132:-290.874,0,-237.178	0/0:132:125,7:125:4431:7:252:0,-17.5446,-375.888	0/0:189:189,0:189:6773:0:0:0,-56.8947,-608.715	0/1:4:2,2:2:57:2:72:-5.4092,0,-4.20567	0/1:8:5,3:5:172:3:108:-7.33771,0,-13.292	0/0:15:15,0:15:525:0:0:0,-4.51545,-47.5309	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.2999	0/1:6:3,3:3:104:3:108:-7.85288,0,-6.29592	0/0:265:265,0:265:9478:0:0:0,-79.7729,-850.363	0/0:187:187,0:187:6662:0:0:0,-56.2926,-596.494	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.218	0/1:5:3,2:3:108:2:68:-4.79262,0,-8.55964	0/1:147:57,90:57:2044:90:3240:-237.419,0,-139.756	0/1:33:12,21:12:432:21:756:-55.5079,0,-29.2468	0/0:131:131,0:131:4651:0:0:0,-39.4349,-415.565	0/0:78:78,0:78:2800:0:0:0,-23.4803,-250.64	0/0:104:104,0:104:3713:0:0:0,-31.3071,-333.125	0/1:138:51,86:51:1809:86:3080:-225.175,0,-120.301	0/0:106:106,0:106:3797:0:0:0,-31.9092,-339.137	0/1:211:119,92:119:4255:92:3312:-224.753,0,-317.371	0/1:155:69,86:69:2453:86:3069:-220.701,0,-174.158	0/1:57:29,28:29:1040:28:1008:-69.9016,0,-76.6774	0/0:220:220,0:220:7843:0:0:0,-66.2266,-704.185	0/1:16:7,9:7:248:9:320:-23.4226,0,-17.8325	0/1:111:38,73:38:1364:73:2616:-194.763,0,-89.0837	0/0:49:49,0:49:1744:0:0:0,-14.7505,-155.858	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.0052	0/0:103:102,0:102:3649:0:0:0,-30.7051,-327.815	0/1:64:30,34:30:1080:34:1209:-86.0131,0,-78.1673	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.8687	0/1:16:7,9:7:252:9:324:-23.5257,0,-18.1798	0/0:99:96,3:96:3429:3:108:0,-20.056,-298.562	0/1:125:69,56:69:2457:56:2008:-137.154,0,-183.594	0/1:7:6,1:6:216:1:36:-1.37349,0,-17.669	0/0:233:233,0:233:8285:0:0:0,-70.14,-742.932	0/1:189:104,84:104:3724:84:2983:-202.593,0,-272.685	0/1:123:68,55:68:2414:55:1965:-134.53,0,-179.805	0/0:50:50,0:50:1792:0:0:0,-15.0515,-160.828	0/1:275:105,169:105:3757:169:6038:-441.994,0,-255.016	0/1:152:43,109:43:1544:109:3910:-292.668,0,-93.196	0/0:24:24,0:24:860:0:0:0,-7.22472,-76.2292	0/0:90:90,0:90:3224:0:0:0,-27.0927,-289.708	0/0:111:111,0:111:3977:0:0:0,-33.4143,-357.279	0/1:18:3,15:3:108:15:536:-40.7114,0,-4.64936	0/0:115:115,0:115:4128:0:0:0,-34.6184,-370.971	0/1:85:44,41:44:1584:41:1468:-101.979,0,-117.087	0/1:223:114,109:114:4058:109:3911:-273.611,0,-297.855	0/0:110:110,0:110:3937:0:0:0,-33.1133,-354.026	0/0:48:47,1:47:1673:1:36:0,-10.9687,-147.187	0/1:95:59,36:59:2116:36:1292:-84.2249,0,-161.873	0/0:21:20,1:20:720:1:36:0,-2.72335,-61.4701	0/0:89:89,0:89:3188:0:0:0,-26.7917,-285.172	0/0:112:112,0:112:4011:0:0:0,-33.7154,-360.612	0/0:180:180,0:180:6415:0:0:0,-54.1854,-576.673	0/1:129:54,75:54:1940:75:2700:-196.65,0,-135.834	0/0:83:83,0:83:2961:0:0:0,-24.9855,-265.814	0/0:114:114,0:114:4092:0:0:0,-34.3174,-367.758	0/0:191:190,1:190:6832:1:36:0,-54.016,-610.197	0/1:52:21,31:21:752:31:1116:-81.5536,0,-52.2794	0/0:113:112,0:112:4007:0:0:0,-33.7154,-359.794	0/0:77:77,0:77:2768:0:0:0,-23.1793,-248.654	0/1:42:28,14:28:1004:14:504:-31.5838,0,-77.936	0/1:105:51,54:51:1787:54:1932:-136.697,0,-128.32	0/1:82:23,59:23:828:59:2124:-160.827,0,-50.0998	0/0:122:122,0:122:4376:0:0:0,-36.7257,-393.578	0/0:113:112,1:112:4024:1:36:0,-30.4272,-358.254
chr04	867379	.	G	C	39356.5	PASS	AB=0.529514;ABP=37.7468;AC=43;AF=0.228723;AN=188;AO=2459;CIGAR=1X;DP=9756;DPB=9756;DPRA=1.05208;EPP=5307.97;EPPR=15772.3;GTI=1;LEN=1;MEANALT=1.07692;MQM=41.1497;MQMR=54.5819;NS=94;NUMALT=1;ODDS=0.0596196;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88045;QR=260916;RO=7290;RPL=2455;RPP=5307.97;RPPR=15772.3;RPR=4;RUN=1;SAF=2459;SAP=5342.66;SAR=0;SRF=7290;SRP=15833;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.0405	0/0:131:130,0:130:4652:0:0:0,-39.1339,-414.397	0/0:123:123,0:123:4405:0:0:0,-37.0267,-396.071	0/1:258:117,141:117:4189:141:5039:-360.98,0,-298.922	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.519	0/0:39:39,0:39:1381:0:0:0,-11.7402,-124.277	0/1:152:64,88:64:2304:88:3160:-226.411,0,-161.581	0/0:186:186,0:186:6642:0:0:0,-55.9916,-596.496	0/1:119:65,54:65:2328:54:1940:-133.22,0,-171.097	0/0:128:128,0:128:4570:0:0:0,-38.5318,-411.091	0/1:87:42,45:42:1508:45:1607:-114.213,0,-109.511	0/0:95:95,0:95:3407:0:0:0,-28.5978,-306.369	0/1:94:50,44:50:1783:44:1566:-107.957,0,-132.253	0/0:86:86,0:86:3074:0:0:0,-25.8886,-276.188	0/1:89:42,47:42:1503:47:1677:-119.963,0,-108.656	0/1:70:30,40:30:1076:40:1436:-102.042,0,-75.9804	0/0:77:77,0:77:2768:0:0:0,-23.1793,-248.868	0/0:85:84,1:84:2995:1:36:0,-22.0665,-265.751	0/1:43:25,18:25:900:18:648:-43.7067,0,-68.2073	0/1:107:56,51:56:2012:51:1832:-126.266,0,-148.249	0/1:151:76,74:76:2732:74:2645:-185.067,0,-200.192	0/0:108:107,1:107:3823:1:36:0,-29.0567,-339.304	0/0:123:122,1:122:4376:1:36:0,-33.546,-389.551	0/0:125:114,11:114:4085:11:396:0,-2.90643,-331.739	0/1:54:29,25:29:1040:25:896:-62.1078,0,-77.554	0/1:325:161,164:161:5773:164:5859:-407.923,0,-416.522	0/1:169:81,88:81:2900:88:3168:-224.938,0,-209.312	0/0:48:48,0:48:1709:0:0:0,-14.4494,-153.882	0/1:205:90,115:90:3224:115:4097:-291.6,0,-228.059	0/0:133:126,7:126:4512:7:248:0,-18.1493,-383.226	0/0:189:189,0:189:6755:0:0:0,-56.8947,-607.106	0/1:4:2,2:2:63:2:68:-5.09365,0,-4.77551	0/1:8:5,3:5:180:3:108:-7.33771,0,-14.022	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.1212	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.2999	0/1:6:3,3:3:108:3:108:-7.85288,0,-8.26207	0/0:266:266,0:266:9516:0:0:0,-80.074,-853.778	0/0:189:189,0:189:6761:0:0:0,-56.8947,-605.437	0/0:68:68,0:68:2431:0:0:0,-20.47,-218.51	0/1:5:3,2:3:108:2:72:-5.10817,0,-8.55964	0/1:145:56,89:56:2008:89:3192:-233.829,0,-137.142	0/1:33:12,21:12:423:21:756:-55.5079,0,-28.4336	0/0:129:129,0:129:4608:0:0:0,-38.8329,-411.91	0/0:78:77,0:77:2745:0:0:0,-23.1793,-246.375	0/0:101:101,0:101:3623:0:0:0,-30.404,-325.892	0/1:138:52,86:52:1849:86:3080:-225.22,0,-123.931	0/0:107:107,0:107:3836:0:0:0,-32.2102,-342.408	0/1:210:119,91:119:4253:91:3260:-219.204,0,-319.252	0/1:152:69,83:69:2472:83:2964:-212.486,0,-176.771	0/1:58:30,28:30:1080:28:1008:-69.6005,0,-79.9715	0/0:219:219,0:219:7853:0:0:0,-65.9256,-703.831	0/1:17:8,9:8:284:9:324:-23.4242,0,-20.7707	0/1:113:38,75:38:1359:75:2683:-198.099,0,-88.3697	0/0:48:48,0:48:1720:0:0:0,-14.4494,-153.398	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.0052	0/0:106:106,0:106:3796:0:0:0,-31.9092,-341.235	0/1:64:30,34:30:1067:34:1206:-85.8345,0,-76.9987	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2263	0/1:16:7,9:7:252:9:324:-23.5257,0,-18.1798	0/0:100:97,3:97:3452:3:108:0,-20.3571,-300.671	0/1:126:70,56:70:2512:56:1994:-135.785,0,-188.235	0/1:7:6,1:6:216:1:36:-1.37349,0,-17.669	0/0:232:232,0:232:8303:0:0:0,-69.839,-744.511	0/1:185:102,83:102:3645:83:2980:-203.02,0,-267.023	0/1:121:67,52:67:2393:52:1868:-126.724,0,-178.762	0/0:49:49,0:49:1756:0:0:0,-14.7505,-157.309	0/1:275:105,169:105:3776:169:6071:-444.613,0,-256.814	0/1:152:45,107:45:1620:107:3839:-286.16,0,-99.9429	0/0:23:23,0:23:828:0:0:0,-6.92369,-73.3525	0/0:94:94,0:94:3367:0:0:0,-28.2968,-302.529	0/0:108:108,0:108:3888:0:0:0,-32.5112,-349.457	0/1:18:4,14:4:144:14:500:-37.5226,0,-7.87951	0/0:114:114,0:114:4073:0:0:0,-34.3174,-366.033	0/1:83:43,39:43:1536:39:1404:-96.6453,0,-113.327	0/1:222:113,109:113:4034:109:3893:-272.364,0,-295.998	0/0:112:112,0:112:4024:0:0:0,-33.7154,-361.83	0/0:47:46,1:46:1639:1:36:0,-10.6677,-144.133	0/1:96:59,37:59:2120:37:1332:-87.3563,0,-161.93	0/0:20:19,1:19:680:1:36:0,-2.42232,-57.8705	0/0:84:84,0:84:3004:0:0:0,-25.2865,-268.75	0/0:112:112,0:112:4024:0:0:0,-33.7154,-361.776	0/0:179:179,0:179:6373:0:0:0,-53.8844,-572.925	0/1:130:54,76:54:1944:76:2715:-197.122,0,-135.843	0/0:82:82,0:82:2935:0:0:0,-24.6845,-263.121	0/0:116:116,0:116:4160:0:0:0,-34.9195,-374.079	0/0:187:185,2:185:6644:2:68:0,-49.9422,-590.487	0/1:51:20,31:20:707:31:1116:-81.8547,0,-48.538	0/0:116:116,0:116:4119:0:0:0,-34.9195,-369.88	0/0:76:76,0:76:2727:0:0:0,-22.8783,-245.036	0/1:42:28,14:28:1008:14:504:-31.5838,0,-78.2945	0/1:106:51,55:51:1823:55:1959:-138.704,0,-131.648	0/1:85:26,59:26:927:59:2111:-158.814,0,-58.011	0/0:121:121,0:121:4325:0:0:0,-36.4246,-388.978	0/0:114:114,0:114:4061:0:0:0,-34.3174,-365.384
chr04	1141902	.	G	A	22579.9	PASS	AB=0.441277;ABP=99.6674;AC=43;AF=0.228723;AN=188;AO=1432;CIGAR=1X;DP=6811;DPB=6811;DPRA=1.11216;EPP=3112.56;EPPR=11676.8;GTI=0;LEN=1;MEANALT=1.02174;MQM=60;MQMR=60;NS=94;NUMALT=1;ODDS=1.50247;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51081;QR=192481;RO=5376;RPL=1432;RPP=3112.56;RPPR=11676.8;RPR=0;RUN=1;SAF=0;SAP=3112.56;SAR=1432;SRF=0;SRP=11676.8;SRR=5376;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/0:170:170,0:170:6108:0:0:0,-51.1751,-549.818	0/0:260:259,0:259:9276:0:0:0,-77.9668,-834.447	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/1:44:27,17:27:968:17:593:-40.4494,0,-74.192	0/0:114:113,1:113:4031:1:36:0,-30.7191,-359.381	0/1:37:17,20:17:604:20:705:-52.6347,0,-43.5525	0/0:62:62,0:62:2232:0:0:0,-18.6639,-201.144	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/1:43:23,20:23:820:20:720:-52.1845,0,-61.1782	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/1:55:25,30:25:891:30:1080:-80.9566,0,-63.9521	0/1:35:19,16:19:663:16:572:-41.2774,0,-49.4574	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:32:32,0:32:1139:0:0:0,-9.63296,-102.818	0/1:19:15,4:15:540:4:144:-7.59405,0,-43.217	0/1:106:72,34:72:2580:34:1212:-77.4771,0,-200.54	0/1:118:34,84:34:1220:84:2993:-234.079,0,-74.5853	0/0:110:110,0:110:3940:0:0:0,-33.1133,-354.792	0/1:101:60,41:60:2148:41:1449:-100.3,0,-163.183	0/0:55:54,1:54:1940:1:36:0,-12.9584,-171.278	0/1:52:23,29:23:820:29:1040:-78.2608,0,-58.469	0/1:277:182,93:182:6516:93:3328:-216.594,0,-503.381	0/1:160:87,73:87:3124:73:2605:-186.532,0,-233.221	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:171:92,79:92:3270:79:2796:-200.403,0,-243.042	0/0:118:112,6:112:4020:6:216:0,-15.731,-342.197	0/0:132:132,0:132:4728:0:0:0,-39.736,-425.679	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:23:13,10:13:468:10:356:-25.4576,0,-35.536	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:27:14,13:14:496:13:460:-33.6076,0,-36.8465	0/0:125:125,0:125:4470:0:0:0,-37.6287,-402.469	0/0:138:138,0:138:4936:0:0:0,-41.5421,-444.391	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:119:76,43:76:2716:43:1527:-101.898,0,-208.861	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/1:147:83,64:83:2960:64:2296:-162.65,0,-222.383	0/1:22:9,13:9:324:13:468:-35.837,0,-22.8832	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.818	0/1:83:43,40:43:1540:40:1432:-104.192,0,-113.908	0/0:106:106,0:106:3783:0:0:0,-31.9092,-340.669	0/1:114:57,57:57:2044:57:2052:-150.634,0,-149.914	0/1:60:42,18:42:1500:18:644:-40.2288,0,-117.233	0/1:108:69,39:69:2465:39:1393:-93.1567,0,-189.591	0/0:94:94,0:94:3364:0:0:0,-28.2968,-302.976	0/1:8:2,6:2:72:6:212:-17.0166,0,-4.42848	0/1:86:51,35:51:1828:35:1260:-87.8169,0,-138.912	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.976	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:147:147,0:147:5251:0:0:0,-44.2514,-472.728	0/1:32:18,14:18:648:14:496:-35.3413,0,-49.0189	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:16:8,8:8:288:8:273:-20.0837,0,-21.4509	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/1:74:41,33:41:1476:33:1172:-83.5101,0,-110.86	0/1:6:4,2:4:140:2:72:-5.03054,0,-11.1384	0/0:160:160,0:160:5728:0:0:0,-48.1648,-515.637	0/1:126:86,40:86:3080:40:1428:-90.8878,0,-239.498	0/1:42:26,16:26:932:16:568:-38.8086,0,-71.5556	0/0:78:78,0:78:2788:0:0:0,-23.4803,-251.161	0/1:146:92,54:92:3296:54:1940:-130.926,0,-252.909	0/1:190:67,123:67:2404:123:4380:-337.176,0,-159.421	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.056	0/1:14:8,6:8:284:6:216:-15.5761,0,-21.6889	0/0:81:81,0:81:2888:0:0:0,-24.3834,-260.157	0/1:63:41,22:41:1468:22:788:-52.2799,0,-113.451	0/1:115:68,47:68:2420:47:1665:-115.517,0,-183.438	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.072	0/1:77:49,28:49:1756:28:989:-66.1427,0,-135.145	0/1:60:27,33:27:972:33:1184:-88.8065,0,-69.7361	0/0:22:22,0:22:783:0:0:0,-6.62266,-70.7929	0/0:92:92,0:92:3300:0:0:0,-27.6948,-297.218	0/0:95:95,0:95:3396:0:0:0,-28.5978,-305.855	0/0:209:209,0:209:7493:0:0:0,-62.9153,-674.409	0/1:97:37,60:37:1332:60:2152:-164.747,0,-90.9825	0/0:39:39,0:39:1391:0:0:0,-11.7402,-125.488	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/1:26:16,10:16:576:10:356:-24.5545,0,-44.3482	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.847	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/1:23:17,6:17:612:6:216:-12.8668,0,-48.4897	0/1:67:44,23:44:1576:23:809:-52.9593,0,-121.963	0/1:27:12,15:12:432:15:536:-40.447,0,-31.0934	0/0:110:110,0:110:3932:0:0:0,-33.1133,-354.073	0/0:58:58,0:58:2075:0:0:0,-17.4597,-187.02
chr04	1195793	.	ACC	GCT,GCC	335522	PASS	AB=0.541463,0.455401;ABP=122.037,140.725;AC=144,44;AF=0.765957,0.234043;AN=188;AO=12080,3652;CIGAR=1X1M1X,1X2M;DP=15783;DPB=15783;DPRA=0,3.24784;EPP=25862.2,7863.89;EPPR=5.18177;GTI=0;LEN=3,1;MEANALT=2.10638,2.5614;MQM=59.9642,59.9942;MQMR=60;NS=94;NUMALT=2;ODDS=9.36503;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=425341,130005;QR=36;RO=1;RPL=12037,3644;RPP=25862.2,7863.89;RPPR=5.18177;RPR=43,8;RUN=1,1;SAF=0,0;SAP=26234.4,7933.23;SAR=12080,3652;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:60:0,59,1:0:0:59,1:2062,36:-185.488,-17.7608,0,-182.551,-14.4635,-182.25	1/1:44:0,43,1:0:0:43,1:1502,36:-135.099,-12.9443,0,-132.161,-9.64705,-131.86	1/1:98:0,96,0:0:0:96,0:3405,0:-306.409,-28.8989,0,-306.409,-28.8989,-306.409	1/1:132:0,132,0:0:0:132,0:4679,0:-421.273,-39.736,0,-421.273,-39.736,-421.273	1/1:54:0,54,0:0:0:54,0:1891,0:-170.465,-16.2556,0,-170.465,-16.2556,-170.465	1/1:16:0,16,0:0:0:16,0:572,0:-51.8136,-4.81648,0,-51.8136,-4.81648,-51.8136	1/2:32:0,19,13:0:0:19,13:669,454:-91.7429,-37.277,-31.5574,-54.8161,0,-50.9027	1/1:65:0,65,0:0:0:65,0:2314,0:-208.522,-19.567,0,-208.522,-19.567,-208.522	1/2:76:0,32,44:0:0:32,44:1131,1549:-218.565,-126.454,-116.821,-92.4639,0,-79.2185	1/1:50:0,49,0:0:0:49,0:1748,0:-157.391,-14.7505,0,-157.391,-14.7505,-157.391	1/1:219:0,219,0:0:0:219,0:7769,0:-699.249,-65.9256,0,-699.249,-65.9256,-699.249	1/1:93:0,92,0:0:0:92,0:3226,0:-290.22,-27.6948,0,-290.22,-27.6948,-290.22	1/2:55:0,33,22:0:0:33,22:1167,783:-159.219,-64.1703,-54.2363,-95.4032,0,-88.7805	1/1:37:0,37,0:0:0:37,0:1283,0:-115.768,-11.1381,0,-115.768,-11.1381,-115.768	1/2:42:0,25,17:0:0:25,17:884,612:-122.291,-50.2959,-42.7702,-72.3522,0,-67.2346	1/2:77:0,41,36:0:0:41,36:1442,1288:-222.765,-105.387,-93.0443,-117.733,0,-106.896	1/1:17:0,17,0:0:0:17,0:570,0:-51.6154,-5.11751,0,-51.6154,-5.11751,-51.6154	1/1:22:0,22,0:0:0:22,0:789,0:-71.3351,-6.62266,0,-71.3351,-6.62266,-71.3351	1/2:117:0,68,49:0:0:68,49:2412,1733:-338.015,-141.503,-121.032,-196.866,0,-182.116	1/2:124:0,62,62:0:0:62,62:2196,2203:-358.758,-179.871,-161.207,-179.241,0,-160.577	1/2:140:0,69,70:0:0:69,70:2436,2503:-402.607,-204.238,-183.467,-198.51,0,-177.438	1/1:116:0,116,0:0:0:116,0:4093,0:-368.559,-34.9195,0,-368.559,-34.9195,-368.559	1/2:93:0,46,46:0:0:46,46:1626,1648:-266.826,-134.401,-120.554,-132.421,0,-118.573	1/1:22:0,20,2:0:0:20,2:713,63:-64.1785,-6.0206,0,-59.1161,-0.639505,-58.5141	1/2:77:0,46,31:0:0:46,31:1602,1112:-221.324,-91.0594,-77.212,-130.619,0,-121.287	1/2:189:1,96,90:1:36:96,90:3383,3179:-531.181,-256.044,-230.083,-272.592,0,-248.437	1/2:194:0,100,94:0:0:100,94:3448,3350:-553.497,-273.42,-243.317,-280.428,0,-252.131	1/1:22:0,21,0:0:0:21,0:735,0:-66.1882,-6.32163,0,-66.1882,-6.32163,-66.1882	1/2:130:0,74,56:0:0:74,56:2626,1994:-376.831,-162.875,-140.599,-214.312,0,-197.454	1/1:85:0,81,3:0:0:81,3:2868,108:-258.003,-24.3834,0,-249.191,-15.5562,-248.287	1/1:60:0,60,0:0:0:60,0:2083,0:-187.736,-18.0618,0,-187.736,-18.0618,-187.736	1/2:374:0,208,164:0:0:208,164:7345,5851:-1075.15,-477.015,-414.4,-598.175,0,-548.806	1/2:872:0,499,370:0:0:499,370:17470,13187:-2496.34,-1074.94,-924.731,-1421.43,0,-1310.05	1/1:966:0,963,1:0:0:963,1:33831,36:-3043.44,-289.892,0,-3040.5,-286.938,-3040.2	1/1:1342:0,1337,1:0:0:1337,1:46789,36:-4209.14,-402.477,0,-4206.2,-399.524,-4205.9	1/2:960:0,511,447:0:0:511,447:18053,15943:-2769.98,-1299.76,-1145.94,-1470.33,0,-1335.77	1/1:151:0,146,5:0:0:146,5:5186,176:-466.529,-43.9504,0,-452.201,-29.2705,-450.696	1/1:101:0,100,0:0:0:100,0:3527,0:-317.434,-30.103,0,-317.434,-30.103,-317.434	1/1:222:0,220,0:0:0:220,0:7775,0:-699.477,-66.2266,0,-699.477,-66.2266,-699.477	1/2:359:0,202,157:0:0:202,157:7169,5576:-1038.81,-454.703,-393.895,-584.463,0,-537.202	1/2:55:0,32,23:0:0:32,23:1143,828:-161.085,-67.9204,-58.2875,-93.5231,0,-86.5994	1/1:114:0,114,0:0:0:114,0:3990,0:-359.294,-34.3174,0,-359.294,-34.3174,-359.294	1/2:110:0,65,45:0:0:65,45:2250,1591:-312.55,-129.933,-110.366,-182.967,0,-169.421	1/2:28:0,17,11:0:0:17,11:583,396:-79.9912,-32.6714,-27.5539,-47.673,0,-44.3616	1/1:34:0,33,0:0:0:33,0:1132,0:-101.967,-9.93399,0,-101.967,-9.93399,-101.967	1/2:82:0,47,35:0:0:47,35:1620,1260:-234.75,-103.169,-89.021,-131.934,0,-121.398	1/1:46:0,46,0:0:0:46,0:1631,0:-147.078,-13.8474,0,-147.078,-13.8474,-147.078	1/2:75:0,35,40:0:0:35,40:1222,1440:-217.249,-117.857,-107.32,-99.7462,0,-87.705	1/2:62:0,39,23:0:0:39,23:1380,824:-179.961,-67.5596,-55.8195,-112.757,0,-105.834	1/2:57:0,32,24:0:0:32,24:1122,860:-161.514,-70.214,-60.5811,-91.3709,0,-84.1462	1/1:92:0,91,1:0:0:91,1:3201,36:-287.955,-27.3937,0,-285.017,-24.0965,-284.716	1/2:546:0,307,234:0:0:307,234:10816,8359:-1562.14,-681.549,-589.132,-880.613,0,-810.172	1/2:81:0,31,50:0:0:31,50:1083,1792:-234.603,-146.511,-137.179,-88.4444,0,-73.3929	1/1:31:0,30,0:0:0:30,0:1034,0:-93.0035,-9.0309,0,-93.0035,-9.0309,-93.0035	1/1:399:0,398,1:0:0:398,1:13872,36:-1247.88,-119.81,0,-1244.94,-116.513,-1244.64	1/1:92:0,91,0:0:0:91,0:3193,0:-287.385,-27.3937,0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chr04	1253091	.	G	A	106596	PASS	AB=0.526458;ABP=63.7952;AC=45;AF=0.239362;AN=188;AO=5284;CIGAR=1X;DP=20367;DPB=20367;DPRA=1.18835;EPP=11442.4;EPPR=32581.8;GTI=1;LEN=1;MEANALT=1;MQM=42.384;MQMR=51.3092;NS=94;NUMALT=1;ODDS=1.71376;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=188262;QR=522512;RO=15079;RPL=1916;RPP=869.423;RPPR=580.765;RPR=3368;RUN=1;SAF=1920;SAP=859.902;SAR=3364;SRF=6557;SRP=559.051;SRR=8522;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:109:54,55:54:1898:55:1959:-134.933,0,-135.183	0/0:326:326,0:326:11227:0:0:0,-98.1358,-999.53	0/0:321:320,0:320:11146:0:0:0,-96.3296,-989.425	0/0:594:592,2:592:20271:2:72:0,-173.452,-1793.52	0/0:253:253,0:253:8723:0:0:0,-76.1606,-772.776	0/0:139:138,1:138:4741:1:36:0,-38.2539,-418.23	0/1:383:194,189:194:6625:189:6747:-458.761,0,-475.194	0/0:400:399,1:399:13657:1:36:0,-117.509,-1210.1	0/1:213:85,128:85:2921:128:4576:-318.372,0,-195.235	0/0:235:235,0:235:8136:0:0:0,-70.742,-721.975	0/0:120:120,0:120:4272:0:0:0,-36.1236,-371.762	0/0:133:133,0:133:4635:0:0:0,-40.037,-407.515	0/1:148:71,77:71:2477:77:2726:-172.017,0,-174.897	0/0:146:146,0:146:5136:0:0:0,-43.9504,-448.42	0/1:130:54,76:54:1910:76:2720:-175.542,0,-127.957	0/1:98:46,52:46:1601:52:1853:-113.115,0,-110.792	0/0:162:162,0:162:5675:0:0:0,-48.7669,-501.292	0/0:121:121,0:121:4281:0:0:0,-36.4246,-376.577	0/1:66:39,27:39:1327:27:968:-56.9778,0,-96.5939	0/1:530:249,281:249:8541:281:10039:-682.102,0,-601.433	0/1:345:143,202:143:4824:202:7156:-491.832,0,-324.134	0/0:169:169,0:169:5808:0:0:0,-50.8741,-516.14	0/1:206:100,106:100:3456:106:3756:-241.74,0,-244.053	0/0:310:297,13:297:10425:13:468:0,-53.8967,-881.324	0/1:209:92,117:92:3149:117:4163:-288.332,0,-217.217	0/1:622:318,304:318:11045:304:10827:-704.212,0,-785.351	0/1:546:261,285:261:8958:285:10123:-681.734,0,-626.402	0/0:76:76,0:76:2639:0:0:0,-22.8783,-231.55	0/1:537:265,272:265:9166:272:9721:-648.557,0,-651.097	0/0:213:210,3:210:7298:3:108:0,-54.7916,-635.13	0/0:355:355,0:355:12312:0:0:0,-106.866,-1088.79	0/1:20:7,13:7:243:13:449:-29.6439,0,-15.8644	0/1:37:22,15:22:739:15:540:-30.6984,0,-54.3857	0/0:8:8,0:8:288:0:0:0,-2.40824,-25.7441	0/0:29:29,0:29:1023:0:0:0,-8.72987,-90.138	0/1:37:14,23:14:496:23:824:-55.0915,0,-32.1231	0/0:354:354,0:354:12287:0:0:0,-106.565,-1077.12	0/0:254:254,0:254:8749:0:0:0,-76.4616,-775.066	0/0:134:134,0:134:4654:0:0:0,-40.338,-408.41	0/1:14:9,5:9:316:5:180:-8.76255,0,-23.9217	0/1:346:156,190:156:5401:190:6772:-464.981,0,-374.192	0/0:90:90,0:90:3169:0:0:0,-27.0927,-276.153	0/1:369:178,191:178:6135:191:6823:-446.023,0,-433.618	0/1:155:73,82:73:2540:82:2900:-185.584,0,-176.799	0/0:109:109,0:109:3747:0:0:0,-32.8123,-327.385	0/1:181:86,95:86:3016:95:3382:-223.179,0,-212.454	0/0:285:283,0:283:9830:0:0:0,-85.1915,-873.127	0/1:394:197,197:197:6703:197:7030:-479.914,0,-478.456	0/1:221:96,125:96:3301:125:4458:-302.838,0,-227.327	0/1:449:215,234:215:7550:234:8328:-565.939,0,-536.333	0/0:321:321,0:321:11103:0:0:0,-96.6306,-984.699	0/1:32:16,16:16:564:16:572:-34.6372,0,-40.2852	0/1:331:132,199:132:4628:199:7084:-486.216,0,-309.422	0/0:78:78,0:78:2674:0:0:0,-23.4803,-238.36	0/0:35:35,0:35:1235:0:0:0,-10.536,-109.139	0/0:274:274,0:274:9303:0:0:0,-82.4822,-826.066	0/1:128:67,61:67:2305:61:2165:-138.633,0,-167.186	0/0:32:32,0:32:1144:0:0:0,-9.63296,-99.7846	0/1:36:22,14:22:759:14:504:-30.7955,0,-55.7526	0/0:235:235,0:235:8237:0:0:0,-70.742,-727.272	0/1:173:87,86:87:3087:86:3076:-189.109,0,-218.33	0/1:18:12,6:12:428:6:216:-12.8176,0,-32.3071	0/0:337:337,0:337:11665:0:0:0,-101.447,-1030.49	0/1:449:209,240:209:7193:240:8518:-569.098,0,-502.111	0/1:143:73,70:73:2555:70:2481:-165.31,0,-183.231	0/0:234:233,0:233:7988:0:0:0,-70.14,-708.121	0/1:351:194,157:194:6684:157:5612:-365.481,0,-487.846	0/1:241:71,170:71:2498:170:6055:-423.987,0,-148.887	0/0:64:64,0:64:2283:0:0:0,-19.2659,-200.24	0/0:216:216,0:216:7516:0:0:0,-65.0225,-664.347	0/0:166:166,0:166:5843:0:0:0,-49.971,-508.419	0/1:21:10,11:10:344:11:392:-26.3836,0,-24.7565	0/0:229:229,0:229:7835:0:0:0,-68.9359,-695.509	0/1:159:79,80:79:2782:80:2851:-192.806,0,-198.434	0/1:384:173,211:173:6029:211:7517:-503.192,0,-414.985	0/0:415:415,0:415:14458:0:0:0,-124.927,-1282.46	0/1:283:116,167:116:4031:167:5962:-411.733,0,-272.458	0/1:283:144,139:144:5002:139:4946:-337.727,0,-360.823	0/0:59:59,0:59:2078:0:0:0,-17.7608,-184.554	0/0:272:272,0:272:9350:0:0:0,-81.8802,-827.89	0/0:261:260,1:260:8911:1:36:0,-74.9796,-791.094	0/0:503:503,0:503:17558:0:0:0,-151.418,-1547.38	0/1:179:94,85:94:3297:85:3039:-181.355,0,-236.445	0/0:140:140,0:140:4916:0:0:0,-42.1442,-432.753	0/0:164:164,0:164:5727:0:0:0,-49.3689,-505.077	0/0:242:242,0:242:8473:0:0:0,-72.8493,-740.177	0/1:73:38,35:38:1347:35:1248:-77.7509,0,-96.9718	0/0:136:136,0:136:4603:0:0:0,-40.9401,-404.527	0/0:113:113,0:113:3940:0:0:0,-34.0164,-348.342	0/1:102:50,52:50:1792:52:1863:-106.006,0,-125.532	0/1:136:80,56:80:2852:56:2001:-110.951,0,-208.936	0/1:110:43,67:43:1510:67:2384:-160.402,0,-98.9173	0/0:310:310,0:310:10514:0:0:0,-93.3193,-934.835	0/0:198:198,0:198:7004:0:0:0,-59.6039,-613.268
chr04	1438179	.	C	T	200348	PASS	AB=0.465774;ABP=65.2919;AC=144;AF=0.765957;AN=188;AO=9559;CIGAR=1X;DP=12847;DPB=12847;DPRA=0;EPP=20760.1;EPPR=7136.3;GTI=1;LEN=1;MEANALT=1.03191;MQM=56.7012;MQMR=59.9568;NS=94;NUMALT=1;ODDS=0.783431;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=340774;QR=117614;RO=3285;RPL=0;RPP=20760.1;RPPR=7136.3;RPR=9559;RUN=1;SAF=0;SAP=20760.1;SAR=9559;SRF=0;SRP=7136.3;SRR=3285;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:49:16,33:16:559:33:1180:-91.5483,0,-35.8871	1/1:152:0,152:0:0:152:5449:-488.306,-45.7566,0	1/1:168:0,168:0:0:168:5987:-537.353,-50.573,0	1/1:291:2,289:2:72:289:10286:-917.473,-80.763,0	1/1:90:0,90:0:0:90:3224:-290.234,-27.0927,0	1/1:92:0,92:0:0:92:3300:-296.544,-27.6948,0	0/1:156:72,84:72:2565:84:3004:-223.447,0,-184.138	1/1:197:0,196:0:0:196:6999:-626.283,-59.0019,0	0/1:70:30,40:30:1076:40:1425:-106.815,0,-76.0808	1/1:92:1,91:1:36:91:3253:-289.253,-24.0965,0	1/1:68:0,68:0:0:68:2436:-219.136,-20.47,0	1/1:88:0,88:0:0:88:3144:-282.472,-26.4906,0	0/1:82:48,34:48:1728:34:1203:-83.3604,0,-131.121	1/1:132:0,132:0:0:132:4720:-423.995,-39.736,0	0/1:84:41,43:41:1463:43:1540:-113.371,0,-106.679	0/1:62:28,34:28:1004:34:1212:-90.3999,0,-72.012	1/1:103:0,103:0:0:103:3623:-325.231,-31.0061,0	1/1:62:0,62:0:0:62:2186:-196.497,-18.6639,0	0/1:39:16,23:16:576:23:824:-62.6584,0,-40.4348	0/1:155:67,88:67:2408:88:3153:-236.747,0,-170.316	0/1:221:124,97:124:4452:97:3457:-244.294,0,-334.32	1/1:85:0,85:0:0:85:2965:-266.956,-25.5876,0	0/1:129:54,75:54:1925:75:2647:-199.078,0,-134.69	1/1:166:3,163:3:108:163:5844:-514.119,-39.8958,0	0/1:77:55,22:55:1961:22:792:-48.3923,0,-153.584	0/1:545:299,246:299:10731:246:8779:-625.532,0,-801.629	0/1:221:109,112:109:3898:112:3983:-291.411,0,-284.484	1/1:38:0,38:0:0:38:1356:-122.078,-11.4391,0	0/1:276:118,158:118:4236:158:5649:-424.806,0,-298.228	1/1:206:1,205:1:36:205:7300:-651.06,-58.4139,0	1/1:175:0,175:0:0:175:6241:-561.046,-52.6803,0	0/1:12:9,3:9:324:3:108:-6.45616,0,-25.8935	0/1:22:16,6:16:561:6:216:-13.1584,0,-44.1945	1/1:20:0,20:0:0:20:712:-64.2568,-6.0206,0	1/1:5:0,5:0:0:5:180:-16.535,-1.50515,0	0/1:17:13,4:13:468:4:144:-8.07706,0,-37.3283	1/1:308:0,308:0:0:308:10987:-987.577,-92.7172,0	1/1:254:0,254:0:0:254:9112:-819.037,-76.4616,0	1/1:112:0,112:0:0:112:3998:-358.969,-33.7154,0	0/1:5:3,2:3:108:2:72:-5.32832,0,-8.57002	0/1:226:116,110:116:4150:110:3913:-283.678,0,-305.649	1/1:33:0,33:0:0:33:1178:-106.156,-9.93399,0	0/1:266:139,127:139:5004:127:4516:-325.621,0,-370.428	0/1:116:56,60:56:2007:60:2121:-156.089,0,-145.983	1/1:106:0,106:0:0:106:3767:-336.649,-31.9092,0	0/1:186:100,86:100:3575:86:3080:-221.257,0,-265.262	1/1:192:1,191:1:36:191:6833:-609.277,-54.1995,0	0/1:322:162,160:162:5795:160:5687:-414.302,0,-424.73	0/1:184:77,107:77:2751:107:3800:-286.442,0,-192.442	0/1:180:107,72:107:3821:72:2565:-176.645,0,-289.84	1/1:206:0,206:0:0:206:7374:-663.229,-62.0122,0	0/1:17:9,8:9:324:8:288:-21.1466,0,-24.3883	0/1:207:124,83:124:4444:83:2961:-203.771,0,-337.817	1/1:39:1,38:1:36:38:1349:-117.965,-8.1419,0	1/1:47:0,47:0:0:47:1677:-150.827,-14.1484,0	1/1:174:0,174:0:0:174:6196:-556.96,-52.3792,0	0/1:51:32,19:32:1148:19:668:-45.0092,0,-88.2773	1/1:13:0,13:0:0:13:468:-42.4229,-3.91339,0	0/1:20:7,13:7:252:13:464:-36.0479,0,-17.0084	1/1:122:0,122:0:0:122:4349:-390.479,-36.7257,0	0/1:159:89,70:89:3192:70:2483:-175.295,0,-239.637	0/1:19:8,11:8:288:11:392:-29.8963,0,-20.5478	1/1:475:0,475:0:0:475:16914:-1520.68,-142.989,0	0/1:312:181,131:181:6467:131:4681:-327.384,0,-488.19	0/1:145:85,60:85:3056:60:2132:-148.277,0,-231.619	1/1:143:0,143:0:0:143:5079:-456.775,-43.0473,0	0/1:269:162,107:162:5788:107:3799:-260.938,0,-440.056	0/1:173:116,57:116:4168:57:2025:-130.096,0,-323.22	1/1:42:0,42:0:0:42:1485:-133.677,-12.6433,0	1/1:108:0,108:0:0:108:3842:-343.561,-32.5112,0	1/1:131:0,131:0:0:131:4676:-419.6,-39.4349,0	0/1:37:20,17:20:720:17:604:-43.5432,0,-53.9907	1/1:80:0,80:0:0:80:2859:-256.761,-24.0824,0	0/1:80:38,42:38:1352:42:1508:-111.591,0,-97.898	0/1:287:138,149:138:4948:149:5344:-392.763,0,-359.073	1/1:218:1,217:1:36:217:7758:-693.754,-62.0263,0	0/1:107:76,31:76:2709:31:1077:-64.7318,0,-211.684	0/1:205:123,82:123:4393:82:2920:-200.732,0,-333.809	1/1:10:0,10:0:0:10:335:-30.4393,-3.0103,0	1/1:161:1,160:1:36:160:5715:-509.099,-44.8676,0	1/1:67:0,67:0:0:67:2400:-215.625,-20.169,0	1/1:375:0,374:0:0:374:13339:-1198.13,-112.585,0	1/1:127:0,127:0:0:127:4494:-403.516,-38.2308,0	1/1:75:0,75:0:0:75:2649:-238.259,-22.5773,0	1/1:122:0,122:0:0:122:4339:-390.123,-36.7257,0	1/1:241:4,237:4:144:237:8481:-748.694,-59.2346,0	0/1:48:27,21:27:972:21:739:-52.2116,0,-73.3485	1/1:121:1,120:1:36:120:4273:-379.84,-32.8264,0	1/1:98:0,98:0:0:98:3459:-310.849,-29.5009,0	0/1:45:21,24:21:756:24:860:-64.0027,0,-54.8209	0/1:156:86,70:86:3059:70:2504:-178.345,0,-228.579	0/1:82:52,30:52:1856:30:1080:-72.7086,0,-142.635	1/1:155:0,155:0:0:155:5529:-496.681,-46.6597,0	1/1:141:0,141:0:0:141:5056:-454.879,-42.4452,0
chr04	1438184	.	ATTA	GCTT,GCTA	276740	PASS	AB=0.470091,0.525124;ABP=51.7204,37.3801;AC=144,44;AF=0.765957,0.234043;AN=188;AO=9856,3310;CIGAR=2X1M1X,2X2M;DP=13229;DPB=13229.5;DPRA=0,1.15174;EPP=21396.4,7190.58;EPPR=0;GTI=0;LEN=4,2;MEANALT=2.15957,2.68519;MQM=56.7065,59.965;MQMR=0;NS=94;NUMALT=2;ODDS=0.769388;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=36,0;PQR=0;PRO=0;QA=344809,117426;QR=0;RO=0;RPL=1,0;RPP=21396.4,7190.58;RPPR=0;RPR=9855,3310;RUN=1,1;SAF=0,0;SAP=21405,7190.58;SAR=9856,3310;SRF=0;SRP=0;SRR=0;TYPE=complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:53:0,35,18:0:0:35,18:1239,642:-153.403,-52.6917,-42.1557,-101.067,0,-95.6484	1/1:160:0,160,0:0:0:160,0:5568,0:-499.522,-48.1648,0,-499.522,-48.1648,-499.522	1/1:169:0,169,0:0:0:169,0:5982,0:-537.016,-50.8741,0,-537.016,-50.8741,-537.016	1/1:299:0,297,2:0:0:297,2:10361,72:-931.14,-89.4059,0,-925.265,-83.1712,-924.663	1/1:92:0,92,0:0:0:92,0:3199,0:-288.003,-27.6948,0,-288.003,-27.6948,-288.003	1/1:93:0,90,0:0:0:90,0:3157,0:-283.406,-27.0927,0,-283.406,-27.0927,-283.406	1/2:163:0,88,75:0:0:88,75:3080,2653:-466.856,-216.438,-189.947,-250.77,0,-228.193	1/1:204:0,203,0:0:0:203,0:7128,0:-638.639,-61.1091,0,-638.639,-61.1091,-638.639	1/2:73:0,40,33:0:0:40,33:1409,1153:-208.42,-94.1389,-82.0977,-114.631,0,-104.697	1/1:101:0,99,1:0:0:99,1:3472,36:-312.231,-29.802,0,-309.293,-26.834,-308.992	1/1:71:0,70,0:0:0:70,0:2408,0:-216.366,-21.0721,0,-216.366,-21.0721,-216.366	1/1:90:0,89,0:0:0:89,0:3138,0:-281.567,-26.7917,0,-281.567,-26.7917,-281.567	1/2:85:0,37,47:0:0:37,47:1286,1657:-238.714,-134.909,-123.771,-103.795,0,-89.6461	1/1:137:0,137,0:0:0:137,0:4827,0:-433.763,-41.2411,0,-433.763,-41.2411,-433.763	1/2:86:0,44,41:0:0:44,41:1547,1449:-243.731,-118.111,-104.866,-125.72,0,-113.378	1/2:65:0,36,29:0:0:36,29:1264,1035:-187.332,-84.734,-73.897,-102.952,0,-94.2222	1/1:105:0,105,0:0:0:105,0:3662,0:-329.135,-31.6082,0,-329.135,-31.6082,-329.135	1/1:64:0,64,0:0:0:64,0:2231,0:-200.549,-19.2659,0,-200.549,-19.2659,-200.549	1/2:40:0,24,16:0:0:24,16:858,561:-115.882,-46.0016,-38.7769,-70.2331,0,-65.4166	1/2:158:0,91,67:0:0:91,67:3188,2350:-450.605,-191.587,-164.193,-259.368,0,-239.199	1/2:225:0,100,122:0:0:100,122:3506,4333:-637.949,-353.092,-322.989,-284.885,0,-248.159	1/1:90:0,90,0:0:0:90,0:3078,0:-276.772,-27.0927,0,-276.772,-27.0927,-276.772	1/2:132:0,76,54:0:0:76,54:2628,1908:-368.723,-155.488,-132.61,-213.335,0,-197.079	1/1:169:0,165,3:0:0:165,3:5810,106:-520.889,-49.67,0,-512.257,-41.042,-511.354	1/2:77:0,22,54:0:0:22,54:774,1925:-219.886,-156.911,-150.288,-62.969,0,-46.7134	1/2:559:0,251,307:0:0:251,307:8746,10865:-1595.81,-885.048,-809.49,-710.824,0,-618.408	1/2:226:0,113,109:0:0:113,109:3987,3848:-637.119,-313.366,-279.35,-323.77,0,-290.958	1/1:39:0,39,0:0:0:39,0:1352,0:-121.732,-11.7402,0,-121.732,-11.7402,-121.732	1/2:285:0,163,121:0:0:163,121:5674,4326:-813.563,-352.684,-303.616,-460.932,0,-424.507	1/1:217:0,214,3:0:0:214,3:7469,106:-669.693,-64.4204,0,-661.061,-55.4354,-660.158	1/1:180:0,180,0:0:0:180,0:6267,0:-563.177,-54.1854,0,-563.177,-54.1854,-563.177	1/2:13:0,3,10:0:0:3,10:100,360:-37.8186,-29.734,-28.8309,-8.42385,0,-5.41355	1/2:22:0,6,16:0:0:6,16:208,554:-62.2667,-45.3676,-43.5615,-17.2454,0,-12.4289	1/1:21:0,21,0:0:0:21,0:726,0:-65.5554,-6.32163,0,-65.5554,-6.32163,-65.5554	1/1:5:0,5,0:0:0:5,0:180,0:-16.535,-1.50515,0,-16.535,-1.50515,-16.535	1/2:17:0,4,13:0:0:4,13:144,468:-50.1655,-38.5324,-37.3283,-11.9904,0,-8.07706	1/1:322:0,321,0:0:0:321,0:11226,0:-1008.83,-96.6306,0,-1008.83,-96.6306,-1008.83	1/1:261:0,260,0:0:0:260,0:9101,0:-818.103,-78.2678,0,-818.103,-78.2678,-818.103	1/1:113:0,113,0:0:0:113,0:3982,0:-357.54,-34.0164,0,-357.54,-34.0164,-357.54	1/2:5:0,2,3:0:0:2,3:61,106:-13.8513,-8.98601,-8.38395,-5.18942,0,-4.28633	1/2:230:0,113,117:0:0:113,117:3946,4165:-660.187,-339.811,-305.795,-320.727,0,-285.507	1/1:37:0,37,0:0:0:37,0:1279,0:-115.241,-11.1381,0,-115.241,-11.1381,-115.241	1/2:272:0,129,142:0:0:129,142:4492,5042:-775.343,-410.879,-372.046,-364.514,0,-321.767	1/2:118:0,61,56:0:0:61,56:2130,1994:-335.47,-162.516,-144.153,-172.947,0,-156.09	1/1:109:0,109,0:0:0:109,0:3820,0:-341.784,-32.8123,0,-341.784,-32.8123,-341.784	1/2:191:0,90,99:0:0:90,99:3128,3503:-539.495,-285.26,-258.168,-254.225,0,-224.423	1/1:196:0,190,1:0:0:190,1:6671,36:-598.479,-57.1957,0,-595.541,-54.2508,-595.24	1/2:332:0,170,162:0:0:170,162:5945,5734:-950.536,-467.41,-416.235,-483.477,0,-434.71	1/2:185:0,107,78:0:0:107,78:3765,2755:-530.732,-224.711,-192.5,-306.373,0,-282.893	1/2:186:0,77,108:0:0:77,108:2693,3831:-530.987,-312.115,-288.936,-218.864,0,-186.352	1/1:217:0,217,0:0:0:217,0:7607,0:-684.263,-65.3235,0,-684.263,-65.3235,-684.263	1/2:17:0,8,9:0:0:8,9:280,320:-49.2092,-26.4333,-24.0251,-23.1283,0,-20.419	1/2:209:0,85,124:0:0:85,124:2991,4413:-602.986,-360.014,-334.426,-243.326,0,-205.998	1/1:42:0,41,1:0:0:41,1:1432,36:-128.72,-12.3422,0,-125.782,-9.04499,-125.481	1/1:47:0,47,0:0:0:47,0:1637,0:-147.31,-14.1484,0,-147.31,-14.1484,-147.31	1/1:177:0,176,0:0:0:176,0:6200,0:-557.026,-52.9813,0,-557.026,-52.981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chr04	1461918	.	A	G	4771.97	PASS	AB=0.476739;ABP=23.0127;AC=45;AF=0.239362;AN=188;AO=2049;CIGAR=1X;DP=8464;DPB=8464;DPRA=1.19216;EPP=4452.36;EPPR=13930.8;GTI=11;LEN=1;MEANALT=1.02041;MQM=19.8023;MQMR=33.9146;NS=94;NUMALT=1;ODDS=0.686271;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73143;QR=229539;RO=6414;RPL=0;RPP=4452.36;RPPR=13930.8;RPR=2049;RUN=1;SAF=2049;SAP=4452.36;SAR=0;SRF=6414;SRP=13930.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:28,26:28:993:26:924:-19.1729,0,-58.3147	0/0:67:67,0:67:2397:0:0:0,-20.169,-182.002	0/0:167:167,0:167:5977:0:0:0,-50.272,-452.526	0/0:91:91,0:91:3252:0:0:0,-27.3937,-265.898	0/0:102:102,0:102:3660:0:0:0,-30.7051,-290.427	0/0:32:32,0:32:1152:0:0:0,-9.63296,-87.4328	0/1:71:41,30:41:1468:30:1080:-37.4062,0,-99.0515	0/0:171:171,0:171:6136:0:0:0,-51.4761,-460.096	0/1:85:50,35:50:1796:35:1251:-24.2868,0,-107.659	0/0:82:82,0:82:2940:0:0:0,-24.6845,-241.272	0/0:56:56,0:56:2004:0:0:0,-16.8577,-162.93	0/0:94:94,0:94:3368:0:0:0,-28.2968,-253.007	0/1:54:34,20:34:1209:20:716:-12.0079,0,-75.299	0/0:88:88,0:88:3156:0:0:0,-26.4906,-245.207	0/1:59:33,26:33:1180:26:928:-28.1052,0,-77.1995	0/1:50:26,24:26:921:24:860:-25.7476,0,-57.5123	0/0:38:38,0:38:1368:0:0:0,-11.4391,-103.734	0/0:41:41,0:41:1472:0:0:0,-12.3422,-111.64	0/1:46:31,15:31:1116:15:540:-8.7702,0,-68.8975	0/1:328:162,166:162:5804:166:5952:-205.283,0,-375.662	0/1:117:66,51:66:2372:51:1821:-58.1656,0,-150.003	0/0:114:114,0:114:4066:0:0:0,-34.3174,-339.024	0/1:80:29,51:29:1044:51:1828:-69.7028,0,-61.5845	0/0:56:52,4:52:1864:4:140:0,-10.3272,-140.127	0/1:84:48,36:48:1728:36:1284:-32.8563,0,-110.565	0/1:166:98,68:98:3501:68:2417:-86.6222,0,-242.646	0/1:231:126,105:126:4475:105:3753:-110.803,0,-284.462	0/0:24:24,0:24:860:0:0:0,-7.22472,-67.4554	0/1:277:160,117:160:5691:117:4181:-152.732,0,-391.553	0/0:147:143,4:143:5117:4:144:0,-38.347,-397.709	0/0:52:52,0:52:1857:0:0:0,-15.6536,-153.425	1/1:10:1,9:1:32:9:320:-14.4269,-0.0226366,0	0/1:29:17,12:17:608:12:432:-13.0074,0,-40.1784	0/0:7:7,0:7:252:0:0:0,-2.10721,-19.549	0/0:16:16,0:16:572:0:0:0,-4.81648,-43.2495	0/1:34:21,13:21:756:13:468:-9.00671,0,-47.0477	0/0:147:147,0:147:5280:0:0:0,-44.2514,-434.297	0/0:128:128,0:128:4588:0:0:0,-38.5318,-362.46	0/0:77:77,0:77:2760:0:0:0,-23.1793,-205.499	0/1:7:1,6:1:36:6:216:-10.4266,0,-1.08041	0/1:77:45,32:45:1620:32:1148:-32.0789,0,-104.936	0/0:34:34,0:34:1220:0:0:0,-10.235,-97.2481	0/1:151:85,66:85:3033:66:2326:-70.9486,0,-190.935	0/1:32:15,17:15:532:17:612:-22.6104,0,-34.0713	0/0:54:53,1:53:1908:1:36:0,-14.4623,-155.375	0/1:127:79,48:79:2829:48:1720:-55.1757,0,-196.521	0/0:181:181,0:181:6478:0:0:0,-54.4864,-488.394	0/1:169:89,80:89:3181:80:2861:-98.6691,0,-209.416	0/1:109:56,53:56:2012:53:1885:-60.4137,0,-133.568	0/1:140:67,73:67:2392:73:2605:-97.6919,0,-154.693	0/0:78:78,0:78:2766:0:0:0,-23.4803,-231.292	0/1:11:8,3:8:288:3:108:-2.33857,0,-20.258	0/1:161:79,82:79:2840:82:2933:-61.0415,0,-167.087	0/0:55:55,0:55:1980:0:0:0,-16.5566,-165.99	0/0:30:30,0:30:1080:0:0:0,-9.0309,-81.5852	0/0:137:137,0:137:4886:0:0:0,-41.2411,-383.3	0/1:12:4,8:4:144:8:288:-11.3226,0,-8.59403	0/0:14:14,0:14:500:0:0:0,-4.21442,-42.0776	0/1:26:12,14:12:424:14:500:-21.3226,0,-26.2841	0/0:81:81,0:81:2912:0:0:0,-24.3834,-229.434	0/1:103:46,57:46:1648:57:2029:-76.3595,0,-104.395	0/1:8:1,7:1:36:7:237:-10.1475,0,-0.890785	0/0:142:142,0:142:5059:0:0:0,-42.7463,-420.028	0/1:157:90,67:90:3194:67:2404:-78.4434,0,-212.615	0/1:73:49,24:49:1756:24:856:-19.2107,0,-116.505	0/0:77:77,0:77:2768:0:0:0,-23.1793,-223.86	0/1:106:57,49:57:2052:49:1737:-66.7122,0,-134.833	0/1:153:49,103:49:1730:103:3692:-151.964,0,-94.0697	0/0:61:61,0:61:2188:0:0:0,-18.3628,-170.348	0/0:57:57,0:57:2021:0:0:0,-17.1587,-152.998	0/0:42:42,0:42:1489:0:0:0,-12.6433,-123.957	0/1:14:9,5:9:320:5:180:-6.51361,0,-22.5133	0/0:155:154,1:154:5536:1:36:0,-45.5609,-416.519	0/1:88:49,39:49:1749:39:1388:-27.2716,0,-105.755	0/1:151:64,87:64:2277:87:3083:-118.754,0,-135.313	0/0:176:176,0:176:6312:0:0:0,-52.9813,-515.821	0/1:143:67,76:67:2389:76:2694:-64.9311,0,-137.074	0/1:110:58,52:58:2042:52:1830:-43.0681,0,-123.261	0/0:26:26,0:26:932:0:0:0,-7.82678,-70.3237	0/0:103:102,1:102:3656:1:36:0,-29.4103,-286.904	0/0:161:161,0:161:5772:0:0:0,-48.4658,-431.695	0/0:130:130,0:130:4649:0:0:0,-39.1339,-379.02	0/0:46:46,0:46:1656:0:0:0,-13.8474,-136.162	0/0:68:68,0:68:2440:0:0:0,-20.47,-201.153	0/0:38:38,0:38:1368:0:0:0,-11.4391,-112.863	0/0:100:100,0:100:3592:0:0:0,-30.103,-293.513	0/1:25:10,15:10:356:15:536:-12.8636,0,-20.1291	0/0:70:70,0:70:2508:0:0:0,-21.0721,-188.06	0/0:61:61,0:61:2188:0:0:0,-18.3628,-165.457	0/1:81:46,35:46:1656:35:1248:-32.4764,0,-107.356	0/1:136:78,58:78:2804:58:2080:-58.9226,0,-182.237	0/1:121:43,78:43:1544:78:2800:-104.153,0,-89.2535	0/0:152:152,0:152:5411:0:0:0,-45.7566,-439.466	0/0:72:72,0:72:2588:0:0:0,-21.6742,-209.331
chr04	1742717	.	CAA	TAG,TAA	622816	PASS	AB=0.556505,0.442085;ABP=298.226,313.134;AC=139,49;AF=0.739362,0.260638;AN=188;AO=18017,5342;CIGAR=1X1M1X,1X2M;DP=23414;DPB=23415.3;DPRA=0,1.04409;EPP=39126.4,11594.3;EPPR=7.35324;GTI=0;LEN=3,1;MEANALT=2.08511,2.44643;MQM=59.718,59.6043;MQMR=60;NS=94;NUMALT=2;ODDS=3.07829;PAIRED=0,0;PAIREDR=0;PAO=2,2;PQA=72,72;PQR=0;PRO=0;QA=627987,187727;QR=72;RO=2;RPL=6973,1859;RPP=2000.45,1075.08;RPPR=7.35324;RPR=11044,3483;RUN=1,1;SAF=6973,1858;SAP=2000.45,1077.72;SAR=11044,3484;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:87:0,46,41:0:0:46,41:1577,1435:-244.864,-117.061,-103.213,-128.15,0,-115.808	1/1:327:0,327,0:0:0:327,0:11295,0:-1016.17,-98.4368,0,-1016.17,-98.4368,-1016.17	1/1:239:0,238,0:0:0:238,0:8374,0:-753.381,-71.6451,0,-753.381,-71.6451,-753.381	1/1:537:0,535,0:0:0:535,0:18575,0:-1670.81,-161.051,0,-1670.81,-161.051,-1670.81	1/1:176:0,174,1:0:0:174,1:6042,36:-543.378,-52.3792,0,-540.441,-49.3669,-540.14	1/1:148:0,148,0:0:0:148,0:5107,0:-459.431,-44.5524,0,-459.431,-44.5524,-459.431	1/2:296:0,173,121:0:0:173,121:6061,4255:-839.492,-346.34,-294.262,-493.143,0,-456.719	1/1:260:0,258,2:0:0:258,2:8958,72:-805.792,-77.6657,0,-799.917,-71.4311,-799.315	1/2:203:0,129,74:0:0:129,74:4476,2628:-578.172,-214.47,-175.638,-364.053,0,-341.777	1/1:270:0,267,0:0:0:267,0:9291,0:-835.106,-80.375,0,-835.106,-80.375,-835.106	1/1:308:0,307,0:0:0:307,0:10720,0:-964.42,-92.4162,0,-964.42,-92.4162,-964.42	1/1:177:0,177,0:0:0:177,0:6165,0:-554.944,-53.2823,0,-554.944,-53.2823,-554.944	1/2:99:0,63,36:0:0:63,36:2218,1275:-284.761,-104.215,-85.2503,-180.899,0,-170.062	1/1:145:0,145,0:0:0:145,0:5047,0:-454.381,-43.6494,0,-454.381,-43.6494,-454.381	1/2:96:0,51,45:0:0:51,45:1784,1566:-272.821,-127.681,-112.329,-145.488,0,-131.942	1/2:98:0,50,48:0:0:50,48:1757,1663:-278.486,-135.479,-120.428,-143.355,0,-128.905	1/1:146:0,145,0:0:0:145,0:5020,0:-451.611,-43.6494,0,-451.611,-43.6494,-451.611	1/1:118:0,118,0:0:0:118,0:4140,0:-372.787,-35.5215,0,-372.787,-35.5215,-372.787	1/2:234:0,127,107:0:0:127,107:4429,3590:-650.948,-291.096,-252.866,-360.193,0,-327.983	1/2:383:0,228,154:0:0:228,154:8007,5476:-1097.85,-446.171,-377.537,-651.669,0,-605.311	1/2:265:0,155,108:0:0:155,108:5437,3803:-751.941,-309.628,-262.968,-442.353,0,-409.842	1/2:150:0,63,87:0:0:63,87:2205,3112:-433.502,-254.115,-235.15,-179.74,0,-153.55	1/2:153:0,102,50:0:0:102,50:3542,1762:-431.511,-143.59,-112.884,-288.059,0,-273.007	1/1:303:0,292,10:0:0:292,10:10131,356:-911.4,-87.9008,0,-882.389,-58.7941,-879.379	1/2:119:0,68,51:0:0:68,51:2383,1822:-342.306,-148.41,-127.94,-194.25,0,-178.897	1/2:581:0,352,229:0:0:352,229:12206,8125:-1654.29,-662.336,-556.374,-992.304,0,-923.368	1/2:356:0,212,144:0:0:212,144:7441,5104:-1021.6,-416.156,-352.338,-605.793,0,-562.445	1/1:67:0,67,0:0:0:67,0:2337,0:-210.559,-20.169,0,-210.559,-20.169,-210.559	1/2:635:0,344,291:0:0:344,291:11966,10395:-1820.35,-847.858,-744.304,-972.841,0,-885.241	1/2:228:0,112,115:0:0:112,115:3955,4091:-655.176,-333.377,-299.661,-321.794,0,-287.175	1/1:293:0,293,0:0:0:293,0:10136,0:-911.696,-88.2018,0,-911.696,-88.2018,-911.696	2/2:210:0,2,208:0:0:2,208:72,7249:-651.828,-645.953,-645.351,-62.6142,-56.3796,0	1/2:565:0,314,251:0:0:314,251:10898,8780:-1600.39,-714.564,-620.04,-886.171,0,-810.613	1/1:74:0,73,0:0:0:73,0:2541,0:-228.561,-21.9752,0,-228.561,-21.9752,-228.561	1/1:329:0,328,1:0:0:328,1:11309,36:-1016.99,-98.7378,0,-1014.05,-95.4406,-1013.75	1/2:567:0,343,224:0:0:343,224:11873,7735:-1592.7,-628.453,-525.199,-964.596,0,-897.165	1/1:361:0,361,0:0:0:361,0:12634,0:-1136.92,-108.672,0,-1136.92,-108.672,-1136.92	1/1:309:0,309,0:0:0:309,0:10784,0:-970.477,-93.0183,0,-970.477,-93.0183,-970.477	1/1:288:0,288,0:0:0:288,0:10047,0:-903.816,-86.6966,0,-903.816,-86.6966,-903.816	2/2:78:0,5,73:0:0:5,73:178,2551:-229.463,-214.955,-213.45,-21.9752,-7.11169,0	1/2:293:0,176,117:0:0:176,117:6160,4115:-836.354,-335.189,-282.208,-501.516,0,-466.295	1/1:152:0,152,0:0:0:152,0:5358,0:-482.335,-45.7566,0,-482.335,-45.7566,-482.335	1/2:247:0,132,115:0:0:132,115:4582,4038:-701.172,-328.71,-288.974,-372.811,0,-338.192	1/2:126:0,75,51:0:0:75,51:2646,1789:-361.397,-145.938,-123.36,-215.811,0,-200.458	1/1:109:0,109,0:0:0:109,0:3818,0:-343.82,-32.8123,0,-343.82,-32.8123,-343.82	1/2:206:0,121,85:0:0:121,85:4224,3024:-590.372,-246.804,-210.38,-343.921,0,-318.333	1/1:263:0,259,1:0:0:259,1:8988,36:-808.484,-77.9668,0,-805.546,-75.0293,-805.245	1/2:343:0,204,139:0:0:204,139:7155,4930:-984.082,-401.917,-340.506,-582.518,0,-540.675	1/2:151:0,95,56:0:0:95,56:3272,2002:-429.074,-163.32,-134.722,-266.106,0,-249.249	1/2:242:0,144,97:0:0:144,97:5009,3447:-688.297,-281.028,-237.68,-407.409,0,-378.209	1/1:419:0,415,2:0:0:415,2:14430,72:-1298.15,-124.927,0,-1292.27,-119.015,-1291.67	1/2:457:0,271,185:0:0:271,185:9489,6479:-1298.83,-526.796,-445.217,-772.028,0,-716.337	1/2:184:0,97,87:0:0:97,87:3407,3045:-525.345,-248.068,-218.868,-277.628,0,-251.438	1/1:132:0,132,0:0:0:132,0:4645,0:-418.218,-39.736,0,-418.218,-39.736,-418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chr04	1742755	.	T	G	68778.3	PASS	AB=0.47046;ABP=55.0966;AC=49;AF=0.260638;AN=188;AO=3922;CIGAR=1X;DP=15015;DPB=15015;DPRA=1.21686;EPP=8519.53;EPPR=24013;GTI=0;LEN=1;MEANALT=1;MQM=59.2183;MQMR=59.5694;NS=94;NUMALT=1;ODDS=12.1789;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=140189;QR=397211;RO=11093;RPL=3922;RPP=8519.53;RPPR=24013;RPR=0;RUN=1;SAF=0;SAP=8519.53;SAR=3922;SRF=0;SRP=24091.2;SRR=11093;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:22,32:22:788:32:1148:-87.3219,0,-54.7886	0/0:225:225,0:225:8076:0:0:0,-67.7317,-725.716	0/0:125:125,0:125:4472:0:0:0,-37.6287,-402.626	0/0:197:197,0:197:7056:0:0:0,-59.3029,-634.063	0/0:109:109,0:109:3908:0:0:0,-32.8123,-351.681	0/0:83:83,0:83:2988:0:0:0,-24.9855,-269.148	0/1:161:78,83:78:2789:83:2955:-217.655,0,-202.687	0/0:164:162,2:162:5804:2:72:0,-42.5322,-515.523	0/1:114:78,36:78:2789:36:1296:-82.5964,0,-216.735	0/0:145:145,0:145:5204:0:0:0,-43.6493,-468.38	0/0:270:270,0:270:9680:0:0:0,-81.2781,-870.925	0/0:80:80,0:80:2876:0:0:0,-24.0824,-259.048	0/1:49:31,18:31:1116:18:644:-43.3494,0,-85.9654	0/0:77:77,0:77:2764:0:0:0,-23.1793,-248.992	0/1:45:24,21:24:856:21:756:-54.8193,0,-63.8124	0/1:53:24,29:24:860:29:1023:-76.2828,0,-61.7591	0/0:85:85,0:85:3060:0:0:0,-25.5875,-275.159	0/0:68:68,0:68:2425:0:0:0,-20.47,-218.495	0/1:211:111,100:111:3992:100:3567:-257.671,0,-295.538	0/1:148:80,68:80:2857:68:2420:-173.417,0,-212.807	0/1:129:82,47:82:2940:47:1684:-112.977,0,-225.852	0/1:52:19,33:19:684:33:1184:-91.212,0,-46.2268	0/1:69:52,17:52:1856:17:612:-34.6318,0,-146.51	0/0:97:95,2:95:3420:2:72:0,-22.368,-301.167	0/1:71:42,29:42:1504:29:1044:-72.0455,0,-114.27	0/1:225:144,81:144:5152:81:2906:-194.034,0,-396.08	0/1:165:99,66:99:3556:66:2368:-163.559,0,-270.428	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.648	0/1:262:144,118:144:5138:118:4228:-301.81,0,-382.49	0/1:156:74,82:74:2652:82:2910:-215.156,0,-191.682	0/0:161:161,0:161:5748:0:0:0,-48.4658,-516.781	1/1:232:1,231:1:36:231:8252:-738.363,-66.2407,0	0/1:597:314,283:314:11179:283:10100:-728.085,0,-826.214	0/0:74:74,0:74:2652:0:0:0,-22.2762,-238.902	0/0:316:315,1:315:11289:1:36:0,-91.5272,-1011.18	0/1:592:343,249:343:12235:249:8916:-623.016,0,-921.48	0/0:170:170,0:170:6108:0:0:0,-51.1751,-549.812	0/0:188:188,0:188:6740:0:0:0,-56.5936,-606.652	0/0:228:228,0:228:8180:0:0:0,-68.6348,-735.506	1/1:84:3,81:3:104:81:2873:-248.948,-15.5837,0	0/1:150:81,69:81:2908:69:2484:-177.156,0,-216.783	0/0:122:122,0:122:4376:0:0:0,-36.7257,-393.976	0/1:124:63,61:63:2241:61:2188:-157.922,0,-164.595	0/1:48:27,21:27:972:21:752:-53.5522,0,-73.3485	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.602	0/1:70:46,24:46:1641:24:852:-55.9274,0,-126.9	0/0:163:163,0:163:5803:0:0:0,-49.0679,-522.065	0/1:175:102,73:102:3656:73:2616:-182.903,0,-276.468	0/1:65:42,23:42:1504:23:824:-54.2827,0,-116.087	0/1:119:68,51:68:2425:51:1828:-128.972,0,-182.681	0/0:171:171,0:171:6132:0:0:0,-51.4761,-551.974	0/1:468:271,197:271:9744:197:7047:-493.039,0,-735.98	0/1:116:57,59:57:2048:59:2104:-154.631,0,-149.644	0/0:70:70,0:70:2501:0:0:0,-21.0721,-225.332	0/0:316:316,0:316:11318:0:0:0,-95.1255,-1018.3	0/0:150:150,0:150:5365:0:0:0,-45.1545,-482.751	0/1:34:15,19:15:536:19:684:-51.6553,0,-38.3351	0/0:370:370,0:370:13229:0:0:0,-111.381,-1190.02	0/1:649:387,262:387:13877:262:9369:-647.704,0,-1052.29	0/0:151:151,0:151:5412:0:0:0,-45.4555,-487.184	0/1:94:51,43:51:1815:43:1542:-110.689,0,-135.328	1/1:135:0,135:0:0:135:4835:-435.147,-40.6391,0	0/0:110:110,0:110:3941:0:0:0,-33.1133,-354.821	0/1:182:103,79:103:3677:79:2815:-198.782,0,-276.319	0/1:97:50,47:50:1800:47:1684:-122.631,0,-133.032	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.426	0/1:98:53,45:53:1889:45:1608:-115.5,0,-140.778	0/1:140:40,100:40:1440:100:3578:-279.966,0,-87.7442	0/0:424:424,0:424:15199:0:0:0,-127.637,-1366.6	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.183	0/0:90:90,0:90:3224:0:0:0,-27.0927,-290.375	1/1:243:8,235:8:284:235:8413:-730.006,-47.2469,0	0/0:130:130,0:130:4660:0:0:0,-39.1339,-419.515	0/1:73:33,40:33:1176:40:1423:-105.746,0,-84.1726	0/1:378:183,195:183:6530:195:6968:-512.359,0,-473.83	0/0:213:213,0:213:7632:0:0:0,-64.1194,-686.891	0/1:137:68,69:68:2436:69:2444:-178.957,0,-178.252	0/1:110:56,54:56:1989:54:1918:-139.758,0,-145.505	0/0:414:412,2:412:14719:2:68:0,-118.169,-1317.63	0/0:142:142,0:142:5096:0:0:0,-42.7463,-458.757	0/0:126:126,0:126:4519:0:0:0,-37.9298,-406.845	0/0:253:253,0:253:9000:0:0:0,-76.1606,-809.659	0/0:94:94,0:94:3372:0:0:0,-28.2968,-303.605	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.608	0/0:74:74,0:74:2648:0:0:0,-22.2762,-238.559	0/0:101:101,0:101:3601:0:0:0,-30.404,-324.267	0/1:22:10,12:10:348:12:432:-32.5903,0,-25.0196	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.39	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.189	0/0:377:377,0:377:13531:0:0:0,-113.488,-1217.33	0/1:322:56,266:56:2008:266:9512:-756.484,0,-84.0163	0/1:48:16,32:16:576:32:1135:-87.9506,0,-37.6947	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:87:87,0:87:3116:0:0:0,-26.1896,-280.662
chr04	1750934	.	GAGG	GAGA,AAGA	45661.1	PASS	AB=0.476647,0.206163;ABP=61.3275,3775.21;AC=91,24;AF=0.484043,0.12766;AN=188;AO=6073,1038;CIGAR=3M1X,1X2M1X;DP=12556;DPB=12556;DPRA=0,4.40907;EPP=13190.4,2257;EPPR=11718.1;GTI=74;LEN=1,4;MEANALT=1.88298,2.36842;MQM=21.8758,21.9297;MQMR=14.0393;NS=94;NUMALT=2;ODDS=0.883262;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=216893,36381;QR=189346;RO=5395;RPL=6072,1038;RPP=13181.7,2257;RPPR=11109.5;RPR=1,0;RUN=1,1;SAF=6072,1038;SAP=13181.7,2257;SAR=1,0;SRF=5324;SRP=11109.5;SRR=71;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:14,40,0:14:499:40,0:1436,0:-62.2721,0,-1.21702,-66.4865,-13.2582,-79.5865	0/1:253:126,126,0:126:4399:126,0:4477,0:-169.47,0,-81.8276,-207.4,-119.757,-327.182	0/1:187:59,127,0:59:2088:127,0:4559,0:-192.656,0,-18.9443,-210.417,-57.1751,-267.584	0/1:277:133,143,1:133:4705:143,1:5113,36:-196.429,0,-82.4415,-234.802,-123.824,-360.031	0/2:131:66,32,33:66:2358:32,33:1144,1166:-34.1292,-0.794211,-55.4439,0,-11.0537,-54.3462	1/2:191:79,65,47:79:2758:65,47:2322,1648:-87.6514,-3.7265,-58.1382,-33.7575,0,-93.5937	0/1:161:45,115,0:45:1576:115,0:4132,0:-178.616,0,-8.04482,-192.162,-42.6633,-234.844	0/1:276:145,130,1:145:5111:130,1:4611,36:-171.706,0,-99.1416,-213.692,-136.611,-351.703	0/1:160:45,115,0:45:1595:115,0:4096,0:-177.249,0,-8.53997,-190.795,-43.1584,-233.792	0/1:129:54,75,0:54:1880:75,0:2665,0:-108.162,0,-28.7466,-124.418,-51.3238,-175.57	0/1:106:54,52,0:54:1864:52,0:1863,0:-69.774,0,-38.5058,-86.0296,-54.1594,-140.008	0/1:127:39,88,0:39:1356:88,0:3126,0:-132.899,0,-12.3239,-144.639,-38.8145,-183.288	0/1:98:32,64,0:32:1145:64,0:2264,0:-95.7285,0,-11.9047,-105.361,-31.1707,-136.562	1/2:94:35,24,34:35:1233:24,34:852,1196:-54.3269,-25.7849,-48.3915,-9.28703,0,-28.8767	1/2:117:51,35,31:51:1819:35,31:1256,1102:-45.3144,-2.89565,-40.9062,-9.25385,0,-48.4713	0/1:111:62,25,23:62:2170:25,23:892,804:-22.8022,0,-51.4526,-3.61958,-21.1114,-55.6744	0/1:82:43,39,0:43:1489:39,0:1384,0:-51.4388,0,-29.9624,-64.3831,-41.7026,-105.905	0/2:79:45,16,18:45:1567:16,18:572,623:-16.1385,-3.08509,-38.5729,0,-13.6799,-34.8827	0/1:89:46,43,0:46:1611:43,0:1548,0:-57.2136,0,-31.6819,-71.061,-44.6262,-115.507	1/2:353:118,126,107:118:4182:126,107:4466,3773:-239.33,-66.8258,-139.486,-97.4722,0,-175.856	0/2:253:136,48,69:136:4752:48,69:1713,2399:-73.1072,-34.748,-148.478,0,-48.8539,-107.403	0/1:57:14,42,0:14:477:42,0:1512,0:-65.7597,0,-0.277523,-69.9741,-12.9208,-82.9386	0/1:125:43,81,0:43:1504:81,0:2881,0:-120.698,0,-16.5695,-133.643,-40.9529,-174.609	1/2:111:31,33,47:31:1052:33,47:1168,1623:-89.3665,-44.8578,-67.5104,-21.2928,0,-39.7261	0/1:168:82,86,0:82:2850:86,0:3050,0:-114.654,0,-51.3294,-139.338,-77.2179,-216.381	0/1:371:162,209,0:162:5666:209,0:7481,0:-294.959,0,-90.8647,-343.726,-153.78,-497.333	0/1:259:108,147,2:108:3819:147,2:5256,72:-209.193,0,-60.3768,-239.264,-102.186,-343.276	0/1:63:20,42,0:20:716:42,0:1504,0:-63.4023,0,-6.43857,-69.4228,-19.0818,-88.5283	0/1:249:79,168,0:79:2782:168,0:6013,0:-253.286,0,-25.1716,-277.067,-75.7446,-352.803	0/1:125:46,78,0:46:1609:78,0:2777,0:-115.223,0,-19.8932,-129.071,-43.3735,-172.456	0/2:168:98,31,39:98:3405:31,39:1116,1373:-34.4146,-12.3364,-95.8547,0,-41.2476,-81.1045	1/1:9:0,9,0:0:0:9,0:320,0:-17.8797,-2.70927,0,-17.8797,-2.70927,-17.8797	0/1:42:20,22,0:20:707:22,0:792,0:-30.8014,0,-12.278,-36.822,-18.9007,-55.5466	1/1:12:2,9,0:2:72:9,0:324,0:-15.2229,-0.841999,0,-15.8249,-2.70927,-17.7252	0/1:14:10,2,2:10:350:2,2:72,71:-0.317418,0,-8.89104,-0.00404533,-6.15625,-8.89491	1/1:31:6,25,0:6:208:25,0:896,0:-41.6387,-1.65648,0,-43.4449,-7.52575,-49.1594	0/1:336:148,188,0:148:5157:188,0:6724,0:-264.279,0,-86.3528,-308.832,-142.946,-451.605	0/1:187:103,84,0:103:3651:84,0:2992,0:-108.317,0,-73.1359,-139.323,-98.4224,-237.563	0/1:139:87,35,17:87:3052:35,17:1247,604:-31.4089,0,-70.6861,-29.8755,-53.486,-105.989	1/2:4:0,1,3:0:0:1,3:36,96:-6.7872,-5.12262,-4.82159,-1.88212,0,-0.979031	0/1:137:59,78,0:59:2107:78,0:2800,0:-111.034,0,-33.6916,-128.794,-57.172,-185.793	0/1:61:14,45,0:14:481:45,0:1620,0:-69.1705,0,-0.332753,-73.3849,-13.8791,-87.3038	0/1:139:49,90,0:49:1719:90,0:3194,0:-133.389,0,-21.7895,-148.139,-48.8822,-196.852	0/1:119:36,82,0:36:1272:82,0:2940,0:-124.953,0,-9.4192,-135.79,-34.1037,-169.91	0/1:122:62,31,28:62:2137:31,28:1112,998:-32.4667,0,-50.562,-4.60067,-13.3413,-56.0683	0/1:139:87,52,0:87:3088:52,0:1845,0:-60.0041,0,-67.1282,-86.1937,-82.7818,-168.788	0/1:197:102,56,39:102:3563:56,39:2008,1362:-61.6253,0,-81.2918,-28.7208,-34.5185,-115.135	0/1:193:68,124,0:68:2391:124,0:4421,0:-182.974,0,-30.6366,-203.444,-67.9643,-271.36	0/1:142:57,84,0:57:1976:84,0:3005,0:-121.837,0,-28.9633,-138.996,-54.2498,-193.205	0/1:141:63,76,1:63:2203:76,1:2708,36:-105.699,0,-40.5984,-123.088,-61.8988,-186.255	0/1:137:67,69,0:67:2333:69,0:2468,0:-93.4844,0,-43.5418,-113.653,-64.3129,-177.919	1/2:14:6,4,4:6:203:4,4:140,138:-5.09539,-0.356052,-5.43574,-0.287424,0,-5.36822	0/1:240:107,132,1:107:3785:132,1:4717,35:-185.604,0,-62.1115,-216.154,-100.187,-317.744	0/1:68:39,29,0:39:1382:29,0:1040,0:-35.7383,0,-28.949,-47.4785,-37.6789,-84.9744	0/2:16:4,2,10:4:143:2,10:72,344:-15.3141,-13.1904,-16.3921,0,-0.419622,-0.763131	1/2:130:46,39,44:46:1610:39,44:1388,1529:-78.9723,-28.9054,-60.9858,-20.1296,0,-50.7034	0/1:106:43,63,0:43:1518:63,0:2237,0:-91.7037,0,-21.6508,-104.648,-40.6157,-145.093	1/2:12:0,8,4:0:0:8,4:273,143:-20.0483,-6.8696,-4.46136,-13.3963,0,-12.1922	1/2:14:4,3,7:4:126:3,7:108,251:-11.7171,-7.92976,-10.7903,-1.27843,0,-2.91829	0/1:135:59,75,1:59:2066:75,1:2688,35:-106.181,0,-34.3977,-122.368,-55.4,-179.075	1/2:131:47,37,46:47:1636:37,46:1332,1613:-78.0153,-31.1306,-66.1384,-14.9224,0,-47.2188	0/1:10:7,3,0:7:245:3,0:108,0:-3.10252,0,-5.92343,-5.20973,-6.82652,-11.8416	0/1:157:60,92,0:60:2115:92,0:3288,0:-135.104,0,-29.1245,-153.166,-56.8193,-210.005	1/2:206:63,56,85:63:2222:56,85:2004,2944:-152.542,-77.7434,-123.352,-31.3392,0,-68.2092	0/1:111:33,74,4:33:1179:74,4:2652,144:-111.46,0,-9.03359,-114.739,-24.646,-144.892	0/1:90:35,55,0:35:1240:55,0:1963,0:-81.0521,0,-16.9542,-91.5881,-33.5108,-124.929	0/2:276:143,66,66:143:5049:66,66:2341,2327:-66.2213,-1.35921,-116.358,0,-26.9339,-115	1/1:122:19,102,1:19:661:102,1:3642,29:-177.701,-13.1664,0,-181.813,-29.093,-199.109	0/1:35:20,15,0:20:718:15,0:540,0:-18.8915,0,-16.6696,-24.9121,-21.1851,-45.9091	1/1:71:10,60,0:10:357:60,0:2148,0:-104.099,-8.56973,0,-107.109,-18.0618,-116.573	1/2:116:45,34,37:45:1565:34,37:1206,1302:-61.156,-19.4705,-51.0917,-13.4102,0,-44.1286	0/1:26:11,14,0:11:389:14,0:500,0:-19.7869,0,-6.6805,-23.0982,-10.8949,-34.111	0/1:169:86,82,0:86:3025:82,0:2911,0:-110.286,0,-57.9491,-136.175,-82.6336,-218.836	0/2:144:70,23,51:70:2429:23,51:824,1773:-63.2543,-47.045,-107.146,0,-29.7131,-51.6614	0/1:393:212,181,0:212:7440:181,0:6465,0:-234.773,0,-148.6,-298.591,-203.086,-501.496	0/1:229:109,119,0:109:3896:119,0:4276,0:-163.114,0,-67.8903,-195.927,-103.713,-299.594	0/1:127:57,70,0:57:2003:70,0:2493,0:-99.07,0,-38.089,-116.229,-59.1611,-175.21	0/1:122:66,56,0:66:2313:56,0:2000,0:-73.261,0,-46.6783,-93.129,-63.5359,-156.483	0/1:20:5,15,0:5:172:15,0:539,0:-23.5796,0,-0.394758,-25.0848,-4.91021,-29.836	0/1:167:78,88,0:78:2739:88,0:3148,0:-121.978,0,-50.1322,-145.458,-76.6229,-222.111	1/2:73:24,24,25:24:835:24,25:856,872:-50.5462,-18.0593,-34.0383,-16.5468,0,-32.2237	0/1:204:96,107,0:96:3358:107,0:3844,0:-148.658,0,-59.926,-177.557,-92.1363,-269.724	0/1:138:64,74,0:64:2219:74,0:2643,0:-102.942,0,-39.4446,-122.208,-61.7208,-183.753	0/1:84:23,59,0:23:826:59,0:2112,0:-90.1571,0,-4.20291,-97.0808,-21.9637,-119.061	0/1:109:52,34,23:52:1846:34,23:1220,805:-40.1951,0,-38.9824,-17.8631,-11.2083,-60.1644	0/1:165:53,111,0:53:1826:111,0:3984,0:-168.09,0,-17.0353,-184.044,-50.4496,-234.509	0/2:37:16,6,15:16:558:6,15:216,528:-19.2189,-13.8784,-26.7729,0,-4.4999,-10.162	0/1:142:64,78,0:64:2242:78,0:2796,0:-109.008,0,-40.0537,-128.274,-63.534,-191.631	0/1:135:64,69,0:64:2244:69,0:2447,0:-94.5396,0,-39.5951,-113.806,-60.3662,-174.203	0/1:65:27,38,0:27:950:38,0:1347,0:-54.559,0,-14.9211,-62.6868,-26.3603,-88.8747	1/2:136:58,40,36:58:2019:40,36:1432,1267:-57.9338,-9.32295,-47.4367,-15.9467,0,-55.2664	1/2:93:23,34,36:23:798:34,36:1220,1284:-87.7038,-38.4298,-49.6463,-34.795,0,-45.4087	0/1:192:92,100,0:92:3240:100,0:3573,0:-136.34,0,-56.87,-164.035,-86.973,-250.833	0/1:201:105,95,0:105:3655:95,0:3387,0:-124.922,0,-71.8538,-156.53,-100.452,-257.01
chr04	1904998	.	GATAC	CATAG	48920.2	PASS	AB=0.509412;ABP=7.62925;AC=47;AF=0.25;AN=188;AO=3070;CIGAR=1X3M1X;DP=11808;DPB=11808;DPRA=1.077;EPP=6368.89;EPPR=16104.2;GTI=1;LEN=5;MEANALT=1.54717;MQM=40.657;MQMR=59.9479;NS=94;NUMALT=1;ODDS=1.95239;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=108300;QR=307928;RO=8681;RPL=35;RPP=6368.89;RPPR=16104.2;RPR=3035;RUN=1;SAF=3070;SAP=6669.43;SAR=0;SRF=8681;SRP=18853.6;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:28,16:28:979:16:572:-35.3276,0,-75.177	0/0:134:134,0:134:4719:0:0:0,-40.338,-424.831	0/0:174:174,0:174:6114:0:0:0,-52.3792,-550.369	0/0:290:286,1:286:10121:1:36:0,-83.2381,-907.34	0/0:100:100,0:100:3564:0:0:0,-30.103,-320.969	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/1:145:67,77:67:2388:77:2698:-192.131,0,-171.509	0/0:138:138,0:138:4866:0:0:0,-41.5421,-438.099	0/1:127:64,63:64:2269:63:2219:-149.75,0,-166.242	0/0:136:135,0:135:4743:0:0:0,-40.639,-426.834	0/0:121:121,0:121:4287:0:0:0,-36.4246,-386.008	0/0:104:104,0:104:3718:0:0:0,-31.3071,-334.823	0/1:118:60,58:60:2149:58:2058:-138.827,0,-158.156	0/0:169:167,0:167:5954:0:0:0,-50.272,-535.61	0/1:97:39,56:39:1404:56:1993:-144.382,0,-97.7016	0/1:95:39,56:39:1395:56:1974:-142.448,0,-97.2515	0/0:83:82,0:82:2928:0:0:0,-24.6845,-263.513	0/0:85:85,0:85:3032:0:0:0,-25.5875,-273.11	0/1:78:33,45:33:1172:45:1581:-110.048,0,-82.307	0/1:117:41,76:41:1449:76:2715:-200.197,0,-95.4847	0/1:165:76,89:76:2671:89:3155:-222.901,0,-190.967	0/1:61:23,38:23:821:38:1348:-100.809,0,-55.85	0/1:102:49,53:49:1738:53:1878:-133.844,0,-125.997	0/1:105:90,14:90:3207:14:497:-11.2361,0,-257.187	0/1:58:23,34:23:816:34:1191:-85.8543,0,-56.2428	0/1:473:259,210:259:9238:210:7353:-507.178,0,-689.861	0/1:263:131,131:131:4644:131:4617:-319.546,0,-338.896	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.563	0/1:215:99,115:99:3472:115:4068:-293.87,0,-247.92	0/1:225:109,111:109:3883:111:3897:-269.425,0,-283.149	0/0:243:241,0:241:8546:0:0:0,-72.5482,-768.674	0/1:5:2,3:2:72:3:107:-8.09855,0,-5.33157	0/1:17:8,9:8:286:9:313:-22.394,0,-20.968	0/0:7:7,0:7:249:0:0:0,-2.10721,-22.7555	0/0:18:18,0:18:634:0:0:0,-5.41854,-57.3871	0/1:18:7,11:7:252:11:385:-27.7328,0,-17.6104	0/0:282:281,0:281:10023:0:0:0,-84.5894,-901.651	0/0:202:202,0:202:7173:0:0:0,-60.8081,-645.315	0/0:165:165,0:165:5871:0:0:0,-49.6699,-528.504	0/1:8:4,4:4:143:4:139:-9.30802,0,-10.8132	0/1:197:105,90:105:3748:90:3168:-214.31,0,-278.541	0/0:65:65,0:65:2310:0:0:0,-19.5669,-208.161	0/1:136:68,68:68:2387:68:2407:-165.94,0,-174.147	0/1:102:41,61:41:1464:61:2163:-158.78,0,-101.351	0/0:87:87,0:87:3054:0:0:0,-26.1896,-275.09	0/1:76:34,42:34:1204:42:1463:-105.937,0,-85.7872	0/0:132:130,0:130:4571:0:0:0,-39.1339,-411.201	0/1:228:101,127:101:3573:127:4475:-323.411,0,-253.058	0/1:109:49,60:49:1712:60:2108:-152.38,0,-121.55	0/1:201:102,97:102:3629:97:3446:-241.125,0,-266.558	0/0:116:115,0:115:4094:0:0:0,-34.6184,-368.293	0/1:24:12,12:12:424:12:430:-30.7697,0,-31.2719	0/1:193:95,97:95:3362:97:3449:-233.732,0,-244.189	0/1:38:14,24:14:488:24:846:-63.7256,0,-32.8097	0/0:14:14,0:14:502:0:0:0,-4.21442,-45.5173	0/0:160:159,0:159:5652:0:0:0,-47.8638,-508.591	0/1:37:20,17:20:719:17:592:-41.2637,0,-53.9005	0/0:12:12,0:12:419:0:0:0,-3.61236,-38.0428	0/1:40:20,20:20:686:20:711:-51.1504,0,-50.017	0/0:63:63,0:63:2240:0:0:0,-18.9649,-201.864	0/1:221:106,114:106:3755:114:4066:-288.521,0,-271.374	0/1:15:7,7:7:251:7:239:-16.8191,0,-18.3987	0/0:215:213,0:213:7562:0:0:0,-64.1194,-680.314	0/1:269:121,146:121:4262:146:5154:-371.027,0,-303.103	0/1:100:56,43:56:1965:43:1505:-100.759,0,-147.047	0/0:92:92,0:92:3202:0:0:0,-27.6948,-288.39	0/1:226:109,113:109:3854:113:3957:-278.792,0,-279.681	0/1:127:33,94:33:1180:94:3330:-252.098,0,-68.2777	0/0:61:61,0:61:2170:0:0:0,-18.3628,-195.567	0/0:76:76,0:76:2680:0:0:0,-22.8783,-241.447	0/0:117:117,0:117:4119:0:0:0,-35.2205,-370.895	0/1:43:20,23:20:707:23:803:-57.3301,0,-51.0106	0/0:128:123,5:123:4367:5:166:0,-24.6543,-379.322	0/1:95:50,45:50:1760:45:1598:-106.733,0,-130.085	0/1:318:177,140:177:6270:140:4934:-330.882,0,-468.546	0/0:208:208,0:208:7372:0:0:0,-62.6142,-663.534	0/1:126:67,59:67:2366:59:2091:-140.215,0,-175.269	0/1:171:90,81:90:3198:81:2832:-188.911,0,-236.568	0/0:16:16,0:16:560:0:0:0,-4.81648,-50.7286	0/0:147:144,2:144:5094:2:72:0,-37.682,-452.066	0/0:94:93,1:93:3299:1:36:0,-24.9092,-293.742	0/0:298:298,0:298:10563:0:0:0,-89.7069,-950.562	0/0:135:134,0:134:4778:0:0:0,-40.338,-429.814	0/0:125:125,0:125:4455:0:0:0,-37.6287,-401.121	0/0:119:119,0:119:4241:0:0:0,-35.8226,-381.871	0/0:193:192,0:192:6866:0:0:0,-57.7978,-617.648	0/1:55:22,33:22:791:33:1164:-81.5933,0,-54.9589	0/0:109:108,0:108:3840:0:0:0,-32.5112,-345.421	0/0:104:99,1:99:3518:1:30:0,-27.4736,-313.843	0/0:101:100,0:100:3564:0:0:0,-30.103,-320.61	0/1:240:114,125:114:4057:125:4399:-307.088,0,-293.097	0/1:80:29,51:29:1039:51:1802:-132.821,0,-69.7422	0/0:106:104,2:104:3686:2:70:0,-25.4093,-325.446	0/0:142:142,0:142:5049:0:0:0,-42.7463,-454.56
chr04	1905007	.	G	A	59875.7	PASS	AB=0.517715;ABP=19.0897;AC=47;AF=0.25;AN=188;AO=3067;CIGAR=1X;DP=11532;DPB=11532;DPRA=1.17499;EPP=3297.14;EPPR=9547.38;GTI=0;LEN=1;MEANALT=1.01852;MQM=40.6609;MQMR=59.9505;NS=94;NUMALT=1;ODDS=3.38562;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110078;QR=302477;RO=8463;RPL=2612;RPP=3297.14;RPPR=9541.12;RPR=455;RUN=1;SAF=3067;SAP=6662.92;SAR=0;SRF=8462;SRP=18371.5;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:41:25,16:25:884:16:572:-36.218,0,-67.5361	0/0:132:132,0:132:4707:0:0:0,-39.736,-423.791	0/0:167:167,0:167:5969:0:0:0,-50.272,-537.316	0/0:280:279,1:279:9933:1:36:0,-80.7857,-890.316	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.247	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.976	0/1:145:67,78:67:2389:78:2794:-200.311,0,-171.616	0/0:136:136,0:136:4828:0:0:0,-40.9401,-434.676	0/1:126:63,63:63:2264:63:2260:-152.951,0,-166.093	0/0:130:130,0:130:4624:0:0:0,-39.1339,-416.1	0/0:116:116,0:116:4142:0:0:0,-34.9195,-372.959	0/0:99:99,0:99:3543:0:0:0,-29.802,-319.078	0/1:117:59,58:59:2108:58:2088:-141.066,0,-154.769	0/0:161:161,0:161:5762:0:0:0,-48.4658,-518.694	0/1:96:40,56:40:1440:56:2016:-146.113,0,-100.999	0/1:94:38,56:38:1368:56:2004:-144.767,0,-95.124	0/0:80:80,0:80:2864:0:0:0,-24.0824,-257.997	0/0:83:83,0:83:2966:0:0:0,-24.9855,-267.172	0/1:79:34,45:34:1215:45:1620:-112.273,0,-85.8744	0/1:116:41,75:41:1455:75:2695:-199.649,0,-95.3047	0/1:161:74,87:74:2626:87:3132:-221.403,0,-188.119	0/1:61:23,38:23:828:38:1368:-102.431,0,-56.4813	0/1:101:48,53:48:1704:53:1904:-136.13,0,-123.241	0/1:103:89,14:89:3181:14:504:-12.3444,0,-255.506	0/1:55:22,33:22:788:33:1184:-85.8377,0,-54.6881	0/1:468:255,213:255:9109:213:7646:-531.447,0,-678.83	0/1:262:131,131:131:4683:131:4708:-326.314,0,-342.761	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/1:211:96,115:96:3432:115:4128:-300.021,0,-245.577	0/1:223:110,113:110:3937:113:4060:-279.338,0,-287.391	0/0:235:235,0:235:8400:0:0:0,-70.742,-755.734	0/1:5:2,3:2:72:3:108:-8.16742,0,-5.33157	0/1:17:8,9:8:284:9:320:-22.9193,0,-20.7858	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:16:16,0:16:563:0:0:0,-4.81648,-50.9992	0/1:18:7,11:7:248:11:396:-28.4575,0,-17.2457	0/0:275:273,1:273:9769:1:36:0,-79.2438,-875.557	0/0:194:194,0:194:6940:0:0:0,-58.3998,-624.506	0/0:162:161,1:161:5741:1:36:0,-45.1686,-513.209	0/1:8:4,4:4:140:4:144:-9.64708,0,-10.5363	0/1:194:102,92:102:3664:92:3304:-224.37,0,-271.563	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.541	0/1:132:66,66:66:2356:66:2368:-162.775,0,-172.563	0/1:102:41,61:41:1472:61:2192:-160.888,0,-102.071	0/0:88:87,0:87:3115:0:0:0,-26.1896,-280.346	0/1:75:33,42:33:1180:42:1504:-109.474,0,-83.9308	0/0:130:130,0:130:4645:0:0:0,-39.1339,-418.211	0/1:221:95,126:95:3416:126:4498:-326.482,0,-241.123	0/1:108:48,60:48:1719:60:2152:-156.088,0,-122.479	0/1:195:96,99:96:3427:99:3556:-251.882,0,-249.943	0/0:117:117,0:117:4162:0:0:0,-35.2205,-374.676	0/1:24:12,12:12:428:12:432:-30.9109,0,-31.6341	0/1:190:95,95:95:3379:95:3396:-228.761,0,-246.744	0/1:37:14,23:14:500:23:813:-61.1125,0,-34.1981	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:158:158,0:158:5661:0:0:0,-47.5627,-509.607	0/1:36:20,16:20:716:16:576:-40.021,0,-53.9306	0/0:12:12,0:12:424:0:0:0,-3.61236,-38.4964	0/1:39:19,20:19:684:20:720:-52.1898,0,-50.1502	0/0:60:60,0:60:2148:0:0:0,-18.0618,-193.587	0/1:213:100,113:100:3575:113:4068:-290.646,0,-257.838	0/1:15:8,7:8:288:7:252:-17.9018,0,-21.752	0/0:207:207,0:207:7406:0:0:0,-62.3132,-666.538	0/1:262:116,146:116:4137:146:5248:-379.788,0,-293.643	0/1:98:55,43:55:1976:43:1548:-103.839,0,-148.614	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03	0/1:223:110,113:110:3927:113:4064:-286.605,0,-286.491	0/1:125:32,93:32:1152:93:3318:-251.279,0,-66.3614	0/0:58:58,0:58:2084:0:0:0,-17.4597,-187.83	0/0:74:74,0:74:2639:0:0:0,-22.2762,-237.757	0/0:113:113,0:113:4037:0:0:0,-34.0164,-363.514	0/1:43:20,23:20:712:23:828:-59.0241,0,-51.4624	0/0:123:118,5:118:4216:5:180:0,-22.0125,-364.601	0/1:93:49,44:49:1760:44:1584:-105.732,0,-130.688	0/1:309:169,140:169:6056:140:5020:-339.843,0,-452.124	0/0:206:206,0:206:7354:0:0:0,-62.0122,-661.905	0/1:125:66,59:66:2360:59:2116:-142.267,0,-175.03	0/1:164:83,81:83:2980:81:2894:-195.501,0,-219.063	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:143:141,2:141:5040:2:72:0,-36.4838,-447.178	0/0:90:89,1:89:3178:1:36:0,-23.7051,-282.856	0/0:289:289,0:289:10292:0:0:0,-86.9977,-926.174	0/0:130:130,0:130:4655:0:0:0,-39.1339,-419.106	0/0:123:123,0:123:4365:0:0:0,-37.0267,-393.023	0/0:115:115,0:115:4120:0:0:0,-34.6184,-370.984	0/0:186:186,0:186:6663:0:0:0,-55.9916,-599.744	0/1:55:22,33:22:792:33:1188:-83.1298,0,-55.049	0/0:105:105,0:105:3760:0:0:0,-31.6081,-338.583	0/0:102:102,0:102:3656:0:0:0,-30.7051,-329.235	0/0:99:99,0:99:3547:0:0:0,-29.802,-319.438	0/1:235:110,125:110:3895:125:4496:-314.843,0,-279.998	0/1:79:28,51:28:1004:51:1824:-134.704,0,-66.8945	0/0:101:99,2:99:3547:2:72:0,-23.7489,-312.783	0/0:137:137,0:137:4902:0:0:0,-41.2411,-441.33
chr04	1988188	.	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chr04	1988218	.	T	A	43412.8	PASS	AB=0.498117;ABP=3.16568;AC=44;AF=0.234043;AN=188;AO=2522;CIGAR=1X;DP=9071;DPB=9071;DPRA=1.51693;EPP=5196.58;EPPR=13209.1;GTI=3;LEN=1;MEANALT=1;MQM=59.3668;MQMR=59.9308;NS=94;NUMALT=1;ODDS=0.459534;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=89792;QR=234638;RO=6549;RPL=2490;RPP=5205.04;RPPR=13209.1;RPR=32;RUN=1;SAF=1;SAP=5470.78;SAR=2521;SRF=0;SRP=14224;SRR=6549;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:90:66,24:66:2353:24:847:-49.3751,0,-184.935	0/0:102:102,0:102:3638:0:0:0,-30.7051,-327.491	0/0:145:145,0:145:5201:0:0:0,-43.6493,-468.036	0/0:217:217,0:217:7800:0:0:0,-65.3235,-701.791	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.305	0/1:133:67,66:67:2397:66:2338:-170.526,0,-175.948	0/0:253:253,0:253:9032:0:0:0,-76.1606,-812.854	0/1:153:75,78:75:2700:78:2795:-205.643,0,-197.178	0/0:105:105,0:105:3780:0:0:0,-31.6081,-340.397	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:106:106,0:106:3782:0:0:0,-31.9092,-340.576	0/1:77:41,36:41:1472:36:1284:-92.538,0,-109.597	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/1:71:32,39:32:1152:39:1400:-104.891,0,-82.617	0/1:46:29,17:29:1044:17:604:-40.8361,0,-80.4274	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5051	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/1:34:22,12:22:792:12:432:-28.9862,0,-61.3707	0/1:135:69,66:69:2450:66:2351:-171.132,0,-180.113	0/1:235:121,114:121:4333:114:4072:-295.908,0,-319.401	0/1:60:24,36:24:864:36:1288:-98.1516,0,-60.0208	0/1:114:48,66:48:1728:66:2353:-177.612,0,-121.477	0/0:89:84,5:84:3016:5:180:0,-10.2396,-255.118	0/1:107:49,58:49:1756:58:2064:-153.78,0,-126.114	0/1:287:135,152:135:4806:152:5420:-401.14,0,-346.299	0/1:266:139,127:139:4989:127:4518:-326.643,0,-369.08	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/1:244:122,122:122:4362:122:4347:-317.931,0,-319.3	0/1:119:64,55:64:2285:55:1952:-140.106,0,-170.083	0/0:103:103,0:103:3685:0:0:0,-31.0061,-331.851	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:15:8,7:8:288:7:252:-18.5088,0,-21.752	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/0:161:161,0:161:5758:0:0:0,-48.4658,-518.115	0/0:108:108,0:108:3872:0:0:0,-32.5112,-348.674	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:130:91,39:91:3268:39:1385:-85.7599,0,-255.206	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/1:223:110,113:110:3944:113:4003:-293.212,0,-288.022	0/1:46:23,23:23:828:23:816:-59.9097,0,-60.9967	0/0:71:71,0:71:2556:0:0:0,-21.3731,-230.29	0/1:96:56,40:56:2016:40:1428:-99.8965,0,-152.324	0/0:152:152,0:152:5468:0:0:0,-45.7566,-490.606	0/1:328:149,179:149:5348:179:6398:-476.236,0,-382.622	0/1:116:58,58:58:2080:58:2088:-153.249,0,-152.551	0/1:142:69,73:69:2480:73:2593:-190.859,0,-180.707	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.937	0/1:7:2,5:2:72:5:176:-14.0778,0,-4.72951	0/1:107:61,46:61:2196:46:1624:-114.192,0,-165.695	0/1:77:38,39:38:1353:39:1392:-102.4,0,-98.8891	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:130:130,0:130:4672:0:0:0,-39.1339,-420.639	0/1:54:27,27:27:957:27:945:-69.1048,0,-70.1882	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5474	0/0:130:130,0:130:4657:0:0:0,-39.1339,-419.29	0/1:58:24,34:24:864:34:1220:-92.6392,0,-60.6228	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/0:104:104,0:104:3710:0:0:0,-31.3071,-334.099	0/1:126:71,55:71:2548:55:1952:-137.978,0,-191.641	0/1:59:40,19:40:1421:19:680:-43.718,0,-110.425	0/0:115:114,1:114:4096:1:32:0,-31.4212,-364.69	0/1:161:78,83:78:2808:83:2963:-218.411,0,-204.493	0/1:355:129,226:129:4598:226:7994:-611.895,0,-307.031	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:99:99,0:99:3534:0:0:0,-29.802,-318.266	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/1:27:11,16:11:396:16:557:-42.3231,0,-27.8549	0/0:99:99,0:99:3529:0:0:0,-29.802,-317.774	0/1:109:55,54:55:1976:54:1936:-141.657,0,-145.298	0/1:171:109,62:109:3909:62:2200:-146.693,0,-300.525	0/0:89:89,0:89:3181:0:0:0,-26.7917,-286.512	0/1:124:56,68:56:1986:68:2440:-182.452,0,-141.493	0/1:173:76,97:76:2694:97:3459:-258.904,0,-190.624	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:102:102,0:102:3672:0:0:0,-30.7051,-330.678	0/0:106:106,0:106:3782:0:0:0,-31.9092,-340.568	0/0:218:215,3:215:7702:3:108:0,-55.5494,-683.134	0/0:63:63,0:63:2253:0:0:0,-18.9649,-203.031	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.307	0/0:54:54,0:54:1944:0:0:0,-16.2556,-174.918	0/0:115:115,0:115:4128:0:0:0,-34.6184,-371.701	0/1:18:10,8:10:360:8:288:-20.8489,0,-27.3258	0/0:55:55,0:55:1980:0:0:0,-16.5566,-178.474	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:50:50,0:50:1785:0:0:0,-15.0515,-160.931	0/1:64:38,26:38:1349:26:917:-63.5785,0,-102.442	0/1:60:26,34:26:936:34:1197:-89.8575,0,-66.4977	0/0:113:113,0:113:4030:0:0:0,-34.0164,-362.886	0/0:128:128,0:128:4581:0:0:0,-38.5318,-412.453
chr04	2364594	.	CCC	CTC,CTT	217215	PASS	AB=0.458022,0.537706;ABP=74.6578,60.8153;AC=145,43;AF=0.771277,0.228723;AN=188;AO=7542,2528;CIGAR=1M1X1M,1M2X;DP=10109;DPB=10109;DPRA=0,1.03997;EPP=16380.3,5492.49;EPPR=18.2106;GTI=1;LEN=1,2;MEANALT=1.76596,2.35417;MQM=59.9879,59.2488;MQMR=60;NS=94;NUMALT=2;ODDS=0.292766;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=269692,89472;QR=229;RO=7;RPL=0,0;RPP=16380.3,5492.49;RPPR=18.2106;RPR=7542,2528;RUN=1,1;SAF=7542,2528;SAP=16380.3,5492.49;SAR=0,0;SRF=7;SRP=18.2106;SRR=0;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:35:0,18,17:0:0:18,17:646,608:-102.612,-49.9168,-44.4983,-53.0528,0,-47.9353	1/1:162:0,162,0:0:0:162,0:5791,0:-521.305,-48.7669,0,-521.305,-48.7669,-521.305	1/1:104:0,103,0:0:0:103,0:3681,0:-331.13,-31.0061,0,-331.13,-31.0061,-331.13	1/1:120:0,120,0:0:0:120,0:4285,0:-385.829,-36.1236,0,-385.829,-36.1236,-385.829	1/1:55:0,52,0:0:0:52,0:1864,0:-167.68,-15.6536,0,-167.68,-15.6536,-167.68	1/1:55:0,55,0:0:0:55,0:1968,0:-177.395,-16.5567,0,-177.395,-16.5567,-177.395	1/2:169:0,81,88:0:0:81,88:2883,3132:-490.4,-255.432,-231.049,-235.323,0,-208.832	1/1:211:2,209,0:2:72:209,0:7476,0:-666.047,-56.6806,0,-666.649,-62.9153,-672.524	1/2:87:0,46,41:0:0:46,41:1644,1429:-250.253,-116.204,-102.357,-134.401,0,-122.059	1/1:85:0,83,1:0:0:83,1:2963,36:-266.553,-24.9855,0,-263.615,-22.0381,-263.314	1/1:144:0,144,0:0:0:144,0:5161,0:-464.63,-43.3483,0,-464.63,-43.3483,-464.63	1/1:103:0,103,0:0:0:103,0:3675,0:-330.954,-31.0061,0,-330.954,-31.0061,-330.954	1/2:106:0,44,62:0:0:44,62:1584,2214:-310.109,-180.861,-167.616,-129.606,0,-110.942	1/1:129:0,129,0:0:0:129,0:4599,0:-414.074,-38.8329,0,-414.074,-38.8329,-414.074	1/2:80:0,32,48:0:0:32,48:1148,1698:-232.276,-138.636,-129.003,-93.9969,0,-79.5474	1/2:144:0,73,71:0:0:73,71:2628,2540:-421.561,-207.128,-185.153,-214.791,0,-193.418	1/1:98:0,98,0:0:0:98,0:3489,0:-314.221,-29.5009,0,-314.221,-29.5009,-314.221	1/1:74:0,74,0:0:0:74,0:2656,0:-239.286,-22.2762,0,-239.286,-22.2762,-239.286	1/2:83:0,40,43:0:0:40,43:1424,1537:-241.685,-125.626,-113.585,-116.416,0,-103.471	1/2:197:0,88,109:0:0:88,109:3147,3874:-572.569,-315.961,-289.47,-256.965,0,-224.153	1/2:155:0,80,74:0:0:80,74:2868,2621:-447.453,-213.534,-189.451,-234.023,0,-211.747	1/2:81:0,28,53:0:0:28,53:1000,1883:-235.253,-153.723,-145.294,-81.8865,0,-65.9319	1/2:89:0,43,46:0:0:43,46:1533,1624:-257.543,-132.581,-119.637,-125.317,0,-111.469	1/1:93:0,85,7:0:0:85,7:3039,248:-273.385,-25.5876,0,-253.183,-5.38947,-251.075	1/2:68:0,37,31:0:0:37,31:1328,1097:-197.888,-89.5597,-78.4216,-108.684,0,-99.3522	1/2:275:0,120,155:0:0:120,155:4277,5470:-794.244,-445.614,-409.49,-348.985,0,-302.325	1/2:138:0,70,67:0:0:70,67:2512,2363:-397.281,-192.377,-171.305,-204.9,0,-184.731	1/1:49:0,49,0:0:0:49,0:1760,0:-158.684,-14.7505,0,-158.684,-14.7505,-158.684	1/2:220:0,117,97:0:0:117,97:4168,3437:-619.393,-279.663,-244.443,-339.745,0,-310.545	1/2:219:0,103,116:0:0:103,116:3694,4065:-632.292,-330.991,-299.985,-301.656,0,-266.736	1/1:147:1,146,0:1:36:146,0:5219,0:-466.25,-40.6531,0,-466.551,-43.9504,-469.489	1/2:13:0,6,7:0:0:6,7:216,252:-38.5463,-20.9217,-19.1156,-17.9843,0,-15.8771	1/2:11:0,5,6:0:0:5,6:180,214:-32.4902,-17.8016,-16.2964,-15.0469,0,-13.2407	1/1:21:0,21,0:0:0:21,0:743,0:-67.1933,-6.32163,0,-67.1933,-6.32163,-67.1933	1/1:20:0,20,0:0:0:20,0:716,0:-64.7677,-6.0206,0,-64.7677,-6.0206,-64.7677	1/2:39:0,15,24:0:0:15,24:540,853:-113.893,-69.8294,-65.314,-44.4211,0,-37.1964	1/1:244:0,241,1:0:0:241,1:8574,36:-771.337,-72.5482,0,-768.4,-69.5925,-768.099	1/1:97:0,97,0:0:0:97,0:3472,0:-312.692,-29.1999,0,-312.692,-29.1999,-312.692	1/1:117:1,116,0:1:36:116,0:4130,0:-368.262,-31.6222,0,-368.563,-34.9195,-371.5	1/2:6:0,5,1:0:0:5,1:180,36:-17.9843,-3.29724,-1.79209,-15.0469,0,-14.7459	1/2:125:0,56,69:0:0:56,69:2004,2413:-360.001,-196.579,-179.721,-163.776,0,-143.005	1/1:105:0,104,0:0:0:104,0:3718,0:-334.569,-31.3071,0,-334.569,-31.3071,-334.569	1/2:159:0,73,86:0:0:73,86:2620,3053:-462.484,-248.769,-226.794,-214.072,0,-188.183	1/2:114:1,58,54:1:36:58,54:2084,1899:-321.275,-151.561,-137.039,-167.073,0,-153.755	1/1:76:0,76,0:0:0:76,0:2696,0:-242.884,-22.8783,0,-242.884,-22.8783,-242.884	1/2:95:0,46,49:0:0:46,49:1632,1738:-274.856,-141.889,-128.042,-133.321,0,-118.571	1/1:162:0,162,0:0:0:162,0:5794,0:-521.573,-48.7669,0,-521.573,-48.7669,-521.573	1/2:169:1,67,99:1:21:67,99:2376,3508:-477.133,-283.858,-265.277,-192.031,0,-163.816	1/1:95:0,94,1:0:0:94,1:3349,36:-301.266,-28.2968,0,-298.329,-24.9996,-298.028	1/2:175:0,80,95:0:0:80,95:2868,3354:-507.295,-273.376,-249.294,-234.275,0,-205.677	1/1:194:0,193,0:0:0:193,0:6908,0:-621.537,-58.0988,0,-621.537,-58.0988,-621.537	1/2:26:0,5,21:0:0:5,21:180,754:-76.5525,-61.8652,-60.3601,-15.0469,0,-8.72528	1/2:134:0,62,72:0:0:62,72:2228,2571:-391.692,-209.93,-191.266,-182.12,0,-160.446	1/2:46:0,20,25:0:0:20,25:720,885:-130.876,-72.1239,-66.1033,-58.8247,0,-51.299	1/1:16:0,16,0:0:0:16,0:572,0:-51.8134,-4.81648,0,-51.8134,-4.81648,-51.8134	1/1:127:0,127,0:0:0:127,0:4530,0:-407.867,-38.2308,0,-407.867,-3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chr04	2505035	.	G	A	101272	PASS	AB=0.477724;ABP=16.2644;AC=146;AF=0.776596;AN=188;AO=4690;CIGAR=1X;DP=6305;DPB=6305;DPRA=0;EPP=9647.36;EPPR=3434.28;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.9599;MQMR=59.9702;NS=94;NUMALT=1;ODDS=0.125882;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=167421;QR=57509;RO=1612;RPL=4627;RPP=9647.36;RPPR=3442.89;RPR=63;RUN=1;SAF=0;SAP=10187.2;SAR=4690;SRF=1;SRP=3494.74;SRR=1611;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:18,14:18:636:14:504:-36.0651,0,-47.9351	1/1:83:0,83:0:0:83:2950:-265.73,-24.9855,0	1/1:90:0,90:0:0:90:3206:-288.755,-27.0927,0	1/1:133:0,133:0:0:133:4738:-426.579,-40.037,0	1/1:61:0,61:0:0:61:2188:-197.186,-18.3628,0	1/1:34:0,34:0:0:34:1208:-109.026,-10.235,0	0/1:74:32,42:32:1148:42:1503:-113.288,0,-81.3536	1/1:146:2,144:2:72:144:5125:-454.552,-37.1137,0	0/1:88:32,56:32:1148:56:2004:-154.141,0,-77.1392	1/1:58:0,58:0:0:58:2076:-187.111,-17.4597,0	1/1:59:0,59:0:0:59:2100:-189.269,-17.7608,0	1/1:70:0,70:0:0:70:2505:-225.702,-21.0721,0	0/1:62:29,33:29:1031:33:1184:-88.2045,0,-74.4388	1/1:52:0,52:0:0:52:1864:-168.039,-15.6536,0	0/1:63:30,33:30:1076:33:1178:-87.3624,0,-78.188	0/1:53:26,27:26:924:27:956:-70.4011,0,-67.5231	1/1:44:0,44:0:0:44:1568:-141.412,-13.2453,0	1/1:34:1,33:1:36:33:1180:-102.91,-6.63675,0	0/1:34:14,20:14:504:20:716:-54.5327,0,-35.4631	0/1:152:92,60:92:3287:60:2148:-147.831,0,-250.293	0/1:89:50,39:50:1770:39:1392:-98.7873,0,-132.79	0/1:91:76,15:76:2692:15:536:-21.1811,0,-215.133	0/1:73:39,34:39:1396:34:1207:-86.9601,0,-103.964	1/1:75:3,72:3:108:72:2568:-221.295,-12.5021,0	0/1:84:29,55:29:1031:55:1929:-148.594,0,-67.8161	0/1:159:84,75:84:2995:75:2673:-192.951,0,-221.918	0/1:162:94,68:94:3349:68:2436:-170.728,0,-252.859	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:136:54,82:54:1915:82:2940:-223.894,0,-131.687	0/1:88:40,47:40:1432:47:1669:-123.946,0,-102.628	1/1:52:0,52:0:0:52:1852:-166.96,-15.6536,0	0/1:9:5,4:5:176:4:144:-10.6043,0,-13.4757	0/1:27:14,13:14:500:13:457:-33.3348,0,-37.2084	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:12:2,10:2:72:10:360:-29.1319,0,-3.22436	1/1:110:0,110:0:0:110:3931:-353.981,-33.1133,0	1/1:80:0,80:0:0:80:2867:-258.266,-24.0824,0	1/1:40:0,40:0:0:40:1423:-128.367,-12.0412,0	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:74:46,28:46:1643:28:1000:-68.0392,0,-125.882	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	0/1:124:57,67:57:2048:67:2404:-179.289,0,-147.228	0/1:43:25,18:25:896:18:631:-44.1714,0,-68.0161	1/1:48:0,48:0:0:48:1704:-153.538,-14.4494,0	0/1:61:32,29:32:1140:29:1036:-75.1911,0,-84.5464	1/1:88:0,88:0:0:88:3154:-284.085,-26.4906,0	0/1:73:30,43:30:1063:43:1537:-116.64,0,-74.0056	1/1:83:0,83:0:0:83:2937:-264.562,-24.9855,0	0/1:88:52,36:52:1868:36:1280:-89.0122,0,-141.909	1/1:94:0,94:0:0:94:3360:-302.617,-28.2968,0	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:103:66,36:66:2368:36:1296:-85.8757,0,-182.313	0/1:37:14,23:14:504:23:824:-63.3452,0,-34.56	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:65:0,65:0:0:65:2324:-209.403,-19.567,0	1/1:48:0,48:0:0:48:1724:-155.445,-14.4494,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:79:0,79:0:0:79:2813:-253.41,-23.7814,0	0/1:74:33,41:33:1184:41:1466:-109.959,0,-84.5921	1/1:4:0,4:0:0:4:144:-13.3132,-1.20412,0	1/1:80:0,80:0:0:80:2850:-256.69,-24.0824,0	0/1:97:44,53:44:1576:53:1891:-141.268,0,-112.932	0/1:71:30,41:30:1080:41:1468:-111.043,0,-76.1401	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	0/1:111:60,51:60:2139:51:1836:-132.102,0,-159.345	0/1:141:91,50:91:3260:50:1791:-119.027,0,-251.089	1/1:48:0,48:0:0:48:1715:-154.636,-14.4494,0	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	1/1:40:0,40:0:0:40:1399:-126.117,-12.0412,0	0/1:21:11,10:11:392:10:360:-26.4227,0,-29.2984	1/1:63:0,62:0:0:62:2223:-199.974,-18.6639,0	0/1:75:46,29:46:1639:29:1031:-70.5254,0,-125.221	1/1:126:0,126:0:0:126:4499:-405.079,-37.9298,0	1/1:75:0,75:0:0:75:2657:-239.376,-22.5773,0	0/1:108:52,56:52:1864:56:1991:-146.952,0,-135.528	0/1:91:41,50:41:1450:50:1792:-134.169,0,-103.401	0/1:7:4,3:4:140:3:108:-7.96796,0,-10.8374	1/1:69:0,69:0:0:69:2468:-222.374,-20.7711,0	1/1:90:0,90:0:0:90:3194:-287.682,-27.0927,0	1/1:123:0,123:0:0:123:4392:-395.434,-37.0267,0	1/1:63:0,63:0:0:63:2243:-202.133,-18.9649,0	1/1:65:1,64:1:36:64:2279:-201.773,-15.9687,0	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	1/1:97:0,97:0:0:97:3471:-312.601,-29.1999,0	0/1:29:13,16:13:459:16:572:-43.0836,0,-32.9109	1/1:55:0,55:0:0:55:1958:-176.389,-16.5567,0	1/1:73:1,72:1:36:72:2588:-229.57,-18.3769,0	1/1:53:0,53:0:0:53:1892:-170.558,-15.9546,0	0/1:86:48,38:48:1698:38:1355:-96.3611,0,-127.216	0/1:58:42,16:42:1476:16:576:-34.7152,0,-115.675	1/1:105:0,105:0:0:105:3748:-337.521,-31.6082,0	1/1:61:0,61:0:0:61:2187:-197.095,-18.3628,0
chr04	2526978	.	G	A	7149.52	PASS	AB=0.492811;ABP=13.5947;AC=93;AF=0.494681;AN=188;AO=11720;CIGAR=1X;DP=23839;DPB=23839;DPRA=0;EPP=25435.3;EPPR=26310.4;GTI=96;LEN=1;MEANALT=1.04255;MQM=11.3183;MQMR=10.5106;NS=94;NUMALT=1;ODDS=43.8166;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=418372;QR=431077;RO=12115;RPL=1;RPP=25444;RPPR=26310.4;RPR=11719;RUN=1;SAF=1;SAP=25444;SAR=11719;SRF=0;SRP=26310.4;SRR=12115;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:113:53,60:53:1879:60:2148:-30.2866,0,-20.6431	0/1:339:172,167:172:6124:167:5983:-70.2562,0,-66.9786	0/1:411:206,205:206:7341:205:7329:-84.9019,0,-79.3891	0/1:568:279,289:279:9939:289:10303:-115.885,0,-80.5106	0/1:206:122,83:122:4376:83:2984:-25.0576,0,-58.3945	0/1:138:77,61:77:2741:61:2184:-19.2424,0,-34.5802	0/1:332:183,149:183:6510:149:5347:-46.5994,0,-67.7869	0/1:461:235,226:235:8352:226:8093:-93.4274,0,-92.3603	0/0:183:133,50:133:4732:50:1779:0,-5.36917,-83.3879	0/1:306:146,160:146:5208:160:5708:-67.855,0,-39.5749	0/1:215:108,107:108:3832:107:3782:-40.4193,0,-32.6438	0/1:149:78,71:78:2796:71:2531:-27.7055,0,-31.9333	0/1:145:74,71:74:2635:71:2532:-29.4511,0,-28.9926	0/1:207:99,108:99:3506:108:3849:-46.9985,0,-37.1065	0/1:129:71,58:71:2511:58:2084:-18.5394,0,-25.4458	0/1:129:73,56:73:2586:56:1998:-16.6377,0,-32.9887	0/1:175:91,84:91:3204:84:2988:-31.5551,0,-36.7331	0/1:127:50,77:50:1780:77:2755:-38.3695,0,-11.2232	0/1:115:64,51:64:2267:51:1782:-15.7565,0,-28.0404	0/1:562:323,238:323:11495:238:8528:-68.6158,0,-123.083	0/1:267:162,105:162:5740:105:3749:-25.6875,0,-79.4858	0/1:225:138,87:138:4914:87:3105:-19.1979,0,-57.4039	0/1:108:59,49:59:2124:49:1752:-15.778,0,-21.0861	0/1:362:154,208:154:5458:208:7426:-101.766,0,-42.2383	0/1:224:111,113:111:3963:113:4027:-46.6474,0,-41.5274	0/1:897:385,512:385:13694:512:18313:-246.828,0,-77.1113	0/1:493:260,233:260:9245:233:8336:-82.2336,0,-108.055	0/1:87:41,46:41:1460:46:1652:-19.2264,0,-14.0072	0/1:675:347,328:347:12423:328:11726:-128.443,0,-109.141	0/1:480:232,248:232:8273:248:8839:-103.276,0,-82.6062	0/1:344:215,129:215:7664:129:4622:-25.1646,0,-90.6137	0/1:23:9,14:9:324:14:504:-7.03028,0,-1.9951	0/1:38:25,13:25:887:13:464:-1.61469,0,-13.3828	0/1:13:8,5:8:284:5:180:-1.1408,0,-4.10566	0/1:31:16,15:16:572:15:540:-5.88194,0,-6.50767	0/1:44:27,17:27:957:17:612:-3.58491,0,-13.5305	0/1:413:161,252:161:5723:252:9025:-130.974,0,-20.5706	0/1:603:347,256:347:12359:256:9167:-74.5888,0,-160.166	0/1:189:104,85:104:3720:85:3022:-27.781,0,-45.5975	0/0:9:8,1:8:279:1:36:0,-1.61053,-6.8249	0/1:363:178,185:178:6313:185:6597:-75.9633,0,-65.6961	0/1:113:56,57:56:1979:57:2040:-22.4536,0,-21.0921	0/1:452:248,204:248:8815:204:7279:-67.9162,0,-108.093	0/1:159:82,77:82:2924:77:2748:-30.6312,0,-26.1342	0/1:141:60,81:60:2117:81:2881:-37.1887,0,-11.7457	0/1:232:105,127:105:3738:127:4535:-58.0659,0,-24.8278	0/1:387:170,217:170:6026:217:7701:-101.976,0,-50.3607	0/1:408:202,206:202:7201:206:7327:-82.2889,0,-59.5504	0/1:247:125,122:125:4434:122:4328:-48.4694,0,-38.4958	0/1:401:220,181:220:7862:181:6438:-57.8432,0,-77.7957	0/1:436:185,251:185:6586:251:8996:-128.292,0,-35.4019	0/1:41:17,24:17:594:24:864:-13.58,0,-3.12077	0/1:421:213,208:213:7613:208:7444:-85.2451,0,-84.8653	0/1:174:99,75:99:3512:75:2684:-22.876,0,-37.1405	0/1:40:19,21:19:684:21:756:-8.9249,0,-6.76682	0/1:402:218,184:218:7741:184:6599:-61.3011,0,-93.5191	0/1:88:40,48:40:1431:48:1712:-20.9879,0,-9.65786	0/1:55:20,35:20:711:35:1240:-21.5021,0,-1.69825	1/1:70:20,50:20:705:50:1800:-34.5592,-2.83561,0	0/1:189:109,80:109:3878:80:2850:-26.6307,0,-50.5009	0/1:307:162,145:162:5765:145:5174:-50.3323,0,-53.5786	0/1:35:15,20:15:523:20:720:-9.3511,0,-3.13049	0/1:484:247,237:247:8781:237:8497:-92.9537,0,-76.4786	0/1:589:338,251:338:12022:251:8960:-69.9539,0,-130.514	0/1:238:114,124:114:4048:124:4390:-53.3088,0,-40.5123	0/1:244:126,118:126:4487:118:4171:-43.0667,0,-40.0734	0/1:270:117,153:117:4191:153:5449:-69.423,0,-24.3678	0/1:384:205,179:205:7291:179:6392:-61.1709,0,-69.6752	0/1:108:45,63:45:1571:63:2225:-32.122,0,-11.9521	0/1:174:91,83:91:3247:83:2972:-29.979,0,-37.1617	0/1:193:108,85:108:3867:85:3010:-28.9802,0,-39.0957	0/1:75:34,41:34:1207:41:1468:-18.0726,0,-8.26396	0/1:357:179,177:179:6334:177:6336:-71.5942,0,-68.9267	0/1:160:68,92:68:2426:92:3253:-45.9787,0,-18.9907	0/1:267:145,122:145:5183:122:4318:-40.3654,0,-61.8433	0/1:497:237,260:237:8418:260:9295:-110.38,0,-66.6273	0/1:331:199,132:199:7081:132:4678:-36.2387,0,-95.9925	0/1:328:162,166:162:5755:166:5943:-73.2452,0,-60.887	0/1:45:19,26:19:671:26:932:-14.6215,0,-5.2521	0/1:303:137,165:137:4897:165:5889:-78.7741,0,-43.6335	0/1:263:133,130:133:4711:130:4629:-56.8916,0,-51.9486	0/1:542:269,273:269:9573:273:9783:-106.174,0,-80.1246	0/1:239:108,131:108:3852:131:4692:-56.6171,0,-25.8745	0/1:143:73,70:73:2590:70:2507:-25.8241,0,-23.2085	0/1:160:76,84:76:2712:84:3008:-34.7332,0,-20.6195	0/1:285:139,146:139:4968:146:5232:-58.3208,0,-39.4513	0/1:90:47,43:47:1668:43:1519:-15.6118,0,-19.3938	0/1:176:64,112:64:2279:112:3978:-60.7961,0,-9.86218	0/1:156:79,77:79:2812:77:2737:-29.5379,0,-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chr04	2526998	.	A	C	4.5993e-09	PASS	AB=0.509924;ABP=23.0081;AC=95;AF=0.505319;AN=188;AO=12079;CIGAR=1X;DP=23636;DPB=23636;DPRA=0;EPP=25980.9;EPPR=24554.3;GTI=99;LEN=1;MEANALT=1.08511;MQM=10.5165;MQMR=11.3671;NS=94;NUMALT=1;ODDS=20.8904;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=432219;QR=412525;RO=11549;RPL=12050;RPP=25980.9;RPPR=24562.9;RPR=29;RUN=1;SAF=0;SAP=26232.2;SAR=12079;SRF=1;SRP=25072.7;SRR=11548;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:114:61,53:61:2173:53:1891:-20.3472,0,-32.3401	0/1:341:168,173:168:5984:173:6187:-67.4997,0,-72.0381	0/1:408:199,209:199:7124:209:7450:-83.2015,0,-79.9034	0/1:555:283,272:283:9987:272:9749:-78.3536,0,-115.978	0/1:206:83,123:83:2976:123:4416:-59.981,0,-24.853	0/1:136:59,77:59:2112:77:2753:-35.0975,0,-18.1356	0/1:327:144,183:144:5134:183:6542:-69.2032,0,-43.2755	0/1:460:220,240:220:7877:240:8548:-97.7103,0,-85.4362	1/1:182:50,132:50:1792:132:4736:-80.859,-3.66015,0	0/1:307:156,151:156:5568:151:5416:-43.803,0,-63.7068	0/1:211:104,107:104:3720:107:3823:-32.9551,0,-38.7057	0/1:149:71,78:71:2536:78:2785:-31.902,0,-28.4283	0/1:145:70,75:70:2495:75:2688:-29.9914,0,-29.8187	0/1:206:109,97:109:3896:97:3468:-35.8101,0,-48.3028	0/1:128:58,70:58:2067:70:2508:-24.6821,0,-20.3166	0/1:127:55,72:55:1948:72:2575:-32.6166,0,-16.222	0/1:174:82,92:82:2915:92:3272:-38.9865,0,-31.8079	0/1:126:76,50:76:2711:50:1777:-11.4876,0,-38.9854	0/1:116:51,65:51:1819:65:2328:-28.6523,0,-15.5213	0/1:558:236,321:236:8429:321:11489:-123.548,0,-69.0292	0/1:264:105,159:105:3756:159:5696:-79.7454,0,-26.531	0/1:225:86,139:86:3088:139:4979:-59.3172,0,-18.2255	0/1:107:49,58:49:1748:58:2084:-20.3065,0,-16.257	0/1:355:204,151:204:7300:151:5379:-41.2595,0,-101.09	0/1:218:109,109:109:3879:109:3890:-41.4233,0,-44.4692	0/1:892:505,386:505:17974:386:13810:-79.6692,0,-245.543	0/1:487:230,257:230:8211:257:9189:-106.933,0,-83.0449	0/1:87:46,41:46:1652:41:1463:-14.0042,0,-19.2264	0/1:667:318,349:318:11384:349:12512:-113.336,0,-118.482	0/1:471:244,227:244:8685:227:8089:-80.7958,0,-103.512	0/1:337:124,213:124:4416:213:7595:-90.7951,0,-20.512	0/1:22:13,9:13:464:9:324:-2.29613,0,-6.34072	0/1:37:13,24:13:460:24:849:-12.5881,0,-1.91399	0/1:11:4,7:4:144:7:252:-3.72059,0,-0.753999	0/1:29:13,16:13:468:16:561:-7.07794,0,-4.41613	0/1:44:17,27:17:612:27:964:-13.5604,0,-3.58491	0/1:409:249,160:249:8924:160:5731:-20.8247,0,-130.589	0/1:594:251,343:251:8978:343:12277:-158.895,0,-72.7065	0/1:189:84,105:84:2983:105:3772:-46.5034,0,-26.7635	1/1:8:1,7:1:36:7:248:-5.93144,-1.3095,0	0/1:354:178,176:178:6361:176:6288:-66.3973,0,-71.9371	0/1:112:56,56:56:2004:56:2012:-21.4095,0,-21.7657	0/1:448:206,242:206:7311:242:8672:-104.346,0,-71.3616	0/1:160:77,83:77:2749:83:2975:-26.7342,0,-30.3037	0/1:143:82,61:82:2920:61:2172:-13.1107,0,-38.9339	0/1:226:120,106:120:4271:106:3799:-28.5215,0,-53.0643	0/1:376:206,170:206:7397:170:6077:-53.7273,0,-94.1901	0/1:403:205,198:205:7296:198:7099:-57.5153,0,-84.3052	0/1:241:119,122:119:4260:122:4372:-37.5064,0,-45.4947	0/1:401:178,223:178:6368:223:7999:-80.5054,0,-55.7521	0/1:442:254,187:254:9111:187:6673:-35.6195,0,-129.653	0/1:41:23,18:23:824:18:640:-4.02941,0,-10.3294	0/1:417:204,213:204:7289:213:7633:-86.0837,0,-82.3735	0/1:172:75,97:75:2684:97:3484:-35.6239,0,-23.5673	0/1:38:21,17:21:752:17:612:-5.39109,0,-9.52524	0/1:404:181,223:181:6473:223:7984:-97.8852,0,-57.7915	0/1:87:47,40:47:1684:40:1436:-9.96365,0,-20.3035	0/1:53:34,19:34:1220:19:684:-1.31881,0,-22.4688	0/0:68:49,19:49:1756:19:676:0,-3.10904,-34.3526	0/1:189:81,108:81:2895:108:3868:-49.6433,0,-27.7171	0/1:302:140,162:140:5011:162:5795:-55.8998,0,-47.1742	0/1:35:20,15:20:720:15:536:-3.1393,0,-9.3511	0/1:480:235,245:235:8389:245:8777:-76.0334,0,-93.4829	0/1:592:253,339:253:9046:339:12155:-131.424,0,-71.1943	0/1:234:121,113:121:4332:113:4052:-40.9544,0,-51.6524	0/1:245:116,129:116:4090:129:4617:-42.7454,0,-40.7634	0/1:266:150,116:150:5347:116:4168:-24.77,0,-67.7053	0/1:375:172,203:172:6148:203:7273:-70.6895,0,-57.1992	0/1:108:62,46:62:2228:46:1652:-12.9947,0,-33.4136	0/1:172:80,91:80:2872:91:3260:-37.9645,0,-27.8985	0/1:192:82,110:82:2931:110:3956:-41.2037,0,-26.1753	0/1:76:40,36:40:1409:36:1284:-9.85553,0,-16.7459	0/1:350:169,180:169:6043:180:6420:-71.9229,0,-68.5112	0/1:161:93,68:93:3301:68:2432:-18.7001,0,-48.4068	0/1:267:124,143:124:4440:143:5116:-59.9622,0,-45.992	0/1:490:255,235:255:9130:235:8404:-64.4731,0,-107.685	0/1:324:129,195:129:4593:195:6977:-94.2984,0,-35.3912	0/1:329:163,166:163:5855:166:5956:-65.5622,0,-69.7148	0/1:45:27,18:27:964:18:624:-4.23866,0,-15.6979	0/1:305:166,139:166:5952:139:4972:-44.7266,0,-79.0105	0/1:263:130,132:130:4656:132:4723:-51.2845,0,-57.9804	0/1:547:272,275:272:9727:275:9822:-84.0752,0,-103.726	0/1:234:130,104:130:4617:104:3735:-23.7001,0,-57.0586	0/1:142:71,71:71:2548:71:2543:-21.4532,0,-27.2998	0/1:160:85,74:85:3032:74:2660:-18.8493,0,-37.3451	0/1:285:146,139:146:5227:139:4972:-39.6323,0,-61.1066	0/1:90:46,44:46:1648:44:1571:-16.2495,0,-21.5677	0/1:176:112,64:112:4020:64:2300:-9.87475,0,-62.2424	0/1:151:73,78:73:2620:78:2800:-31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chr04	2527004	.	T	C	0	PASS	AB=0.507924;ABP=15.9839;AC=95;AF=0.505319;AN=188;AO=12245;CIGAR=1X;DP=24054;DPB=24054;DPRA=0;EPP=26566.6;EPPR=25375.1;GTI=98;LEN=1;MEANALT=1.12766;MQM=10.5153;MQMR=11.37;NS=94;NUMALT=1;ODDS=43.3099;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=436747;QR=413864;RO=11796;RPL=12242;RPP=26566.6;RPPR=25375.1;RPR=3;RUN=1;SAF=0;SAP=26592.7;SAR=12245;SRF=0;SRP=25617.7;SRR=11796;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:113:60,53:60:2141:53:1870:-19.2793,0,-31.6457	0/1:344:168,176:168:5815:176:6262:-69.4017,0,-71.2902	0/1:415:205,209:205:7187:209:7467:-81.2495,0,-83.3856	0/1:572:293,279:293:10298:279:10001:-79.5371,0,-118.077	0/1:207:82,125:82:2888:125:4456:-61.5947,0,-22.1163	0/1:138:61,77:61:2151:77:2749:-34.5009,0,-19.3257	0/1:335:149,186:149:5253:186:6616:-68.1143,0,-45.7124	0/1:472:230,242:230:7999:242:8637:-95.8898,0,-93.606	1/1:187:53,134:53:1814:134:4771:-80.6263,-2.95437,0	0/1:314:162,151:162:5662:151:5409:-41.8736,0,-67.3539	0/1:215:106,109:106:3717:109:3908:-33.5566,0,-39.3039	0/1:149:71,78:71:2541:78:2789:-31.9932,0,-28.4933	0/1:149:73,76:73:2541:76:2724:-29.7762,0,-32.3161	0/1:208:111,97:111:3932:97:3484:-35.2149,0,-49.5471	0/1:131:61,70:61:2177:70:2516:-23.7816,0,-22.3579	0/1:129:55,74:55:1946:74:2640:-33.9665,0,-15.5961	0/1:181:87,94:87:3019:94:3380:-38.9231,0,-34.4013	0/1:126:77,49:77:2685:49:1741:-10.5076,0,-39.8984	0/1:116:51,65:51:1802:65:2336:-28.6557,0,-15.4641	0/1:563:240,322:240:8463:322:11482:-122.781,0,-72.1949	0/1:267:105,162:105:3731:162:5759:-81.7006,0,-25.5362	0/1:226:86,140:86:3058:140:5004:-57.9968,0,-17.669	0/1:111:51,60:51:1775:60:2152:-20.8993,0,-16.9306	0/1:362:209,153:209:7386:153:5476:-41.1362,0,-103.886	0/1:223:111,112:111:3931:112:3998:-42.7662,0,-44.8873	0/1:918:523,395:523:18206:395:14128:-79.8822,0,-252.96	0/1:499:237,261:237:8323:261:9256:-107.198,0,-86.4963	0/1:88:47,41:47:1654:41:1461:-13.6793,0,-19.8458	0/1:679:326,353:326:11397:353:12636:-113.311,0,-121.166	0/1:480:247,233:247:8597:233:8261:-83.5415,0,-102.64	0/1:348:133,215:133:4662:215:7615:-89.173,0,-27.6884	0/1:22:13,9:13:468:9:309:-2.2697,0,-6.34244	0/1:39:13,26:13:464:26:932:-13.9883,0,-1.31317	0/1:13:5,8:5:180:8:288:-4.10739,0,-1.1408	0/1:31:15,16:15:510:16:561:-6.47588,0,-5.80597	0/1:44:17,27:17:582:27:957:-13.5305,0,-3.5179	0/1:418:255,163:255:9096:163:5848:-20.9086,0,-133.807	0/1:609:254,353:254:8938:353:12554:-164.456,0,-71.2049	0/1:189:84,105:84:3001:105:3772:-46.5932,0,-26.6919	1/1:9:1,8:1:36:8:288:-6.83105,-1.61053,0	0/1:368:187,181:187:6486:181:6417:-66.9713,0,-76.0908	0/1:113:56,57:56:1971:57:2048:-22.0973,0,-21.3698	0/1:458:208,250:208:7235:250:8908:-108.937,0,-69.84	0/1:160:76,84:76:2675:84:2990:-27.5871,0,-29.2447	0/1:145:81,64:81:2897:64:2276:-15.2046,0,-37.381	0/1:236:128,108:128:4501:108:3814:-27.3169,0,-58.4205	0/1:384:215,169:215:7551:169:6008:-50.2637,0,-99.1925	0/1:407:206,201:206:7201:201:7164:-58.9056,0,-83.8949	0/1:250:124,126:124:4297:126:4528:-38.4878,0,-49.6881	0/1:404:179,225:179:6265:225:8070:-81.3614,0,-55.5083	0/1:447:258,188:258:9013:188:6718:-34.9881,0,-132.363	0/1:41:23,18:23:809:18:635:-4.01562,0,-10.2964	0/1:422:206,216:206:7276:216:7706:-87.4555,0,-82.694	0/1:175:78,97:78:2688:97:3488:-34.7226,0,-25.4436	0/1:40:21,19:21:748:19:680:-6.76509,0,-8.92098	0/1:409:185,224:185:6505:224:7962:-97.2899,0,-59.9788	0/1:88:48,40:48:1697:40:1431:-9.65786,0,-20.9545	0/1:54:34,20:34:1190:20:694:-1.96786,0,-22.0921	0/0:69:49,20:49:1722:20:701:0,-2.5363,-33.1406	0/1:187:79,108:79:2746:108:3833:-50.0828,0,-25.1919	0/1:306:143,163:143:5117:163:5782:-55.6049,0,-48.7337	0/1:35:20,15:20:690:15:527:-3.12454,0,-9.28416	0/1:485:237,247:237:8284:247:8791:-76.459,0,-93.6881	0/1:594:254,340:254:8832:340:12182:-131.589,0,-70.8916	0/1:245:127,117:127:4361:117:4189:-41.6741,0,-54.1363	0/1:251:121,129:121:4314:129:4628:-41.0854,0,-44.1561	0/1:273:154,119:154:5329:119:4250:-25.3092,0,-68.9521	0/1:388:180,208:180:6249:208:7422:-71.15,0,-60.7579	0/1:111:64,47:64:2221:47:1654:-13.012,0,-34.3196	0/1:174:81,93:81:2867:93:3336:-39.0609,0,-27.9786	0/1:195:84,111:84:2982:111:3961:-41.1683,0,-27.2829	0/1:78:42,35:42:1482:35:1233:-8.53212,0,-18.2988	0/1:358:176,182:176:6196:182:6464:-71.0987,0,-72.6349	0/1:162:95,67:95:3329:67:2370:-17.3453,0,-50.0084	0/1:270:129,141:129:4422:141:5011:-57.09,0,-49.0231	0/1:496:256,240:256:9038:240:8544:-69.6089,0,-105.575	0/1:337:134,203:134:4641:203:7239:-97.8628,0,-36.1122	0/1:332:164,168:164:5747:168:5922:-66.3166,0,-69.5744	0/1:47:27,19:27:949:19:680:-4.85296,0,-15.2484	0/1:300:164,136:164:5768:136:4852:-43.2257,0,-77.0486	0/1:270:136,134:136:4783:134:4717:-50.7105,0,-61.8282	0/1:555:277,278:277:9782:278:9929:-84.4002,0,-105.816	0/1:235:129,106:129:4534:106:3812:-25.2016,0,-55.6453	0/1:141:69,72:69:2476:72:2592:-22.7506,0,-25.6231	0/1:161:86,75:86:3013:75:2700:-19.2476,0,-37.7403	0/1:291:150,141:150:5271:141:5049:-39.6049,0,-64.2769	0/1:91:46,45:46:1611:45:1616:-16.9434,0,-21.17	0/1:175:113,62:113:3966:62:2224:-8.19669,0,-63.3147	0/1:153:75,78:75:2636:78:2808:-30.7343,0,-28.3514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chr04	2595949	.	TCCT	CCCT,TCCC	62577.3	PASS	AB=0.53407,0.459945;ABP=46.8077,63.5476;AC=113,75;AF=0.601064,0.398936;AN=188;AO=4263,2570;CIGAR=1X3M,3M1X;DP=6906;DPB=6908.5;DPRA=0,2.06996;EPP=9260,5583.69;EPPR=16.0391;GTI=10;LEN=1,1;MEANALT=2.29787,2.42683;MQM=27.259,25.5008;MQMR=34.1667;NS=94;NUMALT=2;ODDS=1981.8;PAIRED=0,0;PAIREDR=0;PAO=0,4.5;PQA=0,101.5;PQR=0;PRO=0;QA=115432,91477;QR=193;RO=6;RPL=0,29;RPP=9260,5334.65;RPPR=16.0391;RPR=4263,2541;RUN=1,1;SAF=0,29;SAP=9260,5334.65;SAR=4263,2541;SRF=0;SRP=16.0391;SRR=6;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:38:0,26,12:0:0:26,12:784,410:-89.2604,-33.6142,-25.7874,-55.9656,0,-52.3532	1/1:58:0,58,0:0:0:58,0:1729,0:-140.429,-17.4597,0,-140.429,-17.4597,-140.429	1/1:78:1,73,2:1:30:73,2:2198,72:-176.079,-19.7575,0,-170.503,-16.0202,-172.109	1/2:135:0,72,63:0:0:72,63:1771,2234:-174.998,-56.165,-34.4908,-119.005,0,-100.04	1/2:72:0,21,51:0:0:21,51:568,1819:-80.6628,-41.5114,-35.1898,-39.3577,0,-24.0052	1/1:32:0,32,0:0:0:32,0:963,0:-78.53,-9.63296,0,-78.53,-9.63296,-78.53	1/2:82:0,39,42:0:0:39,42:929,1500:-140.427,-79.1089,-67.3687,-61.2268,0,-48.5835	1/1:34:0,33,1:0:0:33,1:1007,23:-82.1363,-9.93399,0,-80.4059,-7.97621,-80.1049	1/2:57:0,35,20:0:0:35,20:1060,720:-134.324,-58.802,-48.266,-75.5542,0,-69.5336	1/2:55:0,24,30:0:0:24,30:585,1064:-63.4865,-24.5094,-17.2846,-38.8655,0,-29.8346	1/2:81:0,58,23:0:0:58,23:1391,820:-110.037,-17.9086,-0.448905,-92.2731,0,-85.3494	1/1:40:0,40,0:0:0:40,0:1204,0:-98.4517,-12.0412,0,-98.4517,-12.0412,-98.4517	1/2:55:0,34,21:0:0:34,21:1021,756:-134.616,-61.9801,-51.7451,-72.905,0,-66.5834	1/2:52:0,22,30:0:0:22,30:600,1055:-63.8469,-22.368,-15.7454,-41.6679,0,-32.637	1/2:52:0,21,31:0:0:21,31:504,1101:-87.6159,-54.2575,-47.9359,-33.5752,0,-24.2433	1/2:45:0,32,13:0:0:32,13:875,459:-86.6206,-25.9341,-16.3011,-60.937,0,-57.0236	1/1:18:0,18,0:0:0:18,0:540,0:-44.2318,-5.41854,0,-44.2318,-5.41854,-44.2318	1/1:9:0,9,0:0:0:9,0:274,0:-22.6113,-2.70927,0,-22.6113,-2.70927,-22.6113	1/2:19:0,12,7:0:0:12,7:360,252:-46.3957,-20.9135,-17.3011,-25.8089,0,-23.7017	1/2:100:0,45,55:0:0:45,55:1090,1938:-171.34,-98.9525,-85.4061,-72.6091,0,-56.0525	1/2:128:0,70,57:0:0:70,57:1899,2039:-221.565,-91.3977,-70.3256,-130.171,0,-113.013	2/2:48:0,1,47:0:0:1,47:24,1665:-121.448,-119.861,-119.56,-14.1484,-12.3496,0	1/2:110:0,58,51:0:0:58,51:1426,1821:-185.262,-89.9193,-72.4595,-95.2974,0,-79.9448	1/2:61:0,18,43:0:0:18,43:482,1535:-61.3749,-28.2439,-22.8253,-33.33,0,-20.3857	1/2:51:0,33,17:0:0:33,17:907,608:-80.1268,-17.1141,-7.18007,-62.9756,0,-57.8581	2/2:92:0,12,80:0:0:12,80:317,2824:-168.804,-148.411,-144.798,-24.0824,-3.46523,0	1/2:178:0,95,82:0:0:95,82:2576,2913:-307.034,-129.389,-100.791,-177.668,0,-152.983	1/2:24:1,14,9:1:36:14,9:376,320:-27.8057,-2.1841,-0.933088,-22.7796,0,-23.0158	2/2:74:0,6,68:0:0:6,68:169,2436:-138.456,-126.774,-124.968,-20.47,-8.53972,0	1/2:104:0,66,37:0:0:66,37:1796,1332:-160.705,-36.2019,-16.334,-124.58,0,-113.441	1/2:86:0,43,42:0:0:43,42:1039,1496:-102.961,-33.9697,-21.0254,-68.8254,0,-56.1821	1/2:13:0,7,2:0:0:7,2:187,68:-16.4574,-3.57752,-1.47031,-12.9166,0,-12.3146	1/1:204:0,189,9:0:0:189,9:5167,324:-414.911,-56.8947,0,-404.763,-46.7319,-402.054	1/1:108:0,102,0:0:0:102,0:3073,0:-249.782,-30.7051,0,-249.782,-30.7051,-249.782	1/1:16:0,10,0:0:0:10,0:298,0:-24.2151,-3.0103,0,-24.2151,-3.0103,-24.2151	1/1:242:0,235,5:0:0:235,5:7063,180:-572.486,-70.7421,0,-557.797,-55.9227,-556.292	2/2:141:0,12,129:0:0:12,129:301,4579:-175.489,-155.249,-151.637,-38.8329,-18.4292,0	1/2:120:0,59,61:0:0:59,61:1582,2184:-145.575,-36.8485,-19.0877,-108.897,0,-90.5344	1/1:35:0,35,0:0:0:35,0:1031,0:-83.9174,-10.5361,0,-83.9174,-10.5361,-83.9174	1/1:105:0,104,1:0:0:104,1:2816,36:-225.552,-31.3071,0,-223.24,-28.7054,-222.939	1/2:98:0,37,61:0:0:37,61:1006,2192:-160.808,-91.5587,-80.4205,-69.4751,0,-51.1123	1/2:33:0,19,13:0:0:19,13:511,459:-43.0707,-7.86051,-2.14094,-35.2636,0,-31.3502	1/2:142:0,78,63:0:0:78,63:2117,2231:-271.836,-125.6,-102.119,-146.245,0,-127.28	1/2:35:0,16,19:0:0:16,19:397,680:-61.1589,-34.5333,-29.7169,-26.8511,0,-21.1315	1/2:48:0,12,36:0:0:12,36:286,1274:-48.9322,-30.0252,-26.4129,-19.0946,0,-8.25756	2/2:83:0,2,81:0:0:2,81:56,2904:-168.125,-163.975,-163.373,-24.3834,-19.9708,0	1/1:37:0,34,1:0:0:34,1:1022,36:-82.998,-10.235,0,-80.0663,-7.26286,-79.7652	1/2:87:0,41,46:0:0:41,46:1041,1648:-151.656,-80.6998,-68.3576,-71.1831,0,-57.3357	1/2:74:0,32,42:0:0:32,42:767,1487:-85.1744,-34.3846,-24.7516,-50.9624,0,-38.3192	1/2:58:0,31,27:0:0:31,27:758,963:-99.796,-49.2947,-39.9627,-50.727,0,-42.5992	2/2:73:1,7,65:1:27:7,65:181,2317:-87.0278,-74.7834,-74.7992,-17.4411,-7.06129,0	1/1:156:0,154,1:0:0:154,1:3709,36:-292.56,-46.3586,0,-291.783,-45.571,-291.482	1/2:74:0,38,36:0:0:38,36:1166,1277:-187.77,-104.373,-92.9335,-83.7144,0,-72.8773	1/2:22:0,6,16:0:0:6,16:173,576:-40.9666,-30.0373,-28.2312,-11.1664,0,-6.34991	1/1:80:0,80,0:0:0:80,0:2415,0:-196.384,-24.0824,0,-196.384,-24.0824,-196.384	1/2:74:0,41,33:0:0:41,33:1131,1179:-99.2799,-19.9207,-7.57851,-79.5254,0,-69.5914	1/2:50: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chr04	2595960	.	A	G	5229.37	PASS	AB=0.230661;ABP=1786.84;AC=32;AF=0.170213;AN=188;AO=678;CIGAR=1X;DP=7494;DPB=7494;DPRA=1.36611;EPP=1475.27;EPPR=14740.9;GTI=5;LEN=1;MEANALT=1;MQM=59.5103;MQMR=22.3695;NS=94;NUMALT=1;ODDS=2.97123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=23763;QR=243082;RO=6815;RPL=0;RPP=1475.27;RPPR=14749.5;RPR=678;RUN=1;SAF=0;SAP=1475.27;SAR=678;SRF=1;SRP=14792.9;SRR=6814;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:39:27,12:27:968:12:428:-27.1186,0,-59.232	0/0:58:58,0:58:2075:0:0:0,-17.4597,-151.069	0/0:75:75,0:75:2692:0:0:0,-22.5772,-197.384	0/0:129:129,0:129:4600:0:0:0,-38.8329,-223.087	0/0:74:73,1:73:2599:1:32:0,-19.855,-106.383	0/0:33:33,0:33:1180:0:0:0,-9.93399,-86.6968	0/1:83:59,24:59:2096:24:832:-50.2085,0,-79.1129	0/0:35:35,0:35:1256:0:0:0,-10.536,-93.9201	0/1:58:37,21:37:1315:21:756:-50.8911,0,-79.232	0/0:53:53,0:53:1892:0:0:0,-15.9546,-86.9942	0/0:86:86,0:86:3045:0:0:0,-25.8886,-159.979	0/0:42:42,0:42:1504:0:0:0,-12.6433,-108.814	0/1:55:34,21:34:1220:21:743:-50.6285,0,-73.0331	0/0:54:54,0:54:1936:0:0:0,-16.2556,-87.4641	0/1:53:39,14:39:1391:14:500:-29.3816,0,-49.1559	0/1:47:38,9:38:1355:9:316:-14.6304,0,-69.0589	0/0:18:18,0:18:644:0:0:0,-5.41854,-46.0599	0/0:11:11,0:11:396:0:0:0,-3.31133,-28.1	0/1:21:13,8:13:468:8:288:-19.9375,0,-27.9008	0/1:96:75,21:75:2675:21:739:-37.9158,0,-101.176	0/1:124:101,23:101:3604:23:812:-36.0719,0,-156.553	0/1:89:64,25:64:2292:25:853:-50.2306,0,-73.2596	0/1:104:83,21:83:2933:21:752:-36.6944,0,-122.737	0/0:65:63,2:63:2233:2:68:0,-13.1102,-78.1108	0/0:50:47,3:47:1684:3:108:0,-4.97633,-83.8325	0/1:181:147,34:147:5242:34:1203:-54.0795,0,-176.259	0/1:173:140,33:140:5012:33:1177:-54.1578,0,-213.097	0/0:24:24,0:24:864:0:0:0,-7.22472,-44.7455	0/1:136:111,25:111:3968:25:892:-39.6034,0,-129.872	0/0:103:97,6:97:3468:6:216:0,-11.2156,-166.082	0/0:89:89,0:89:3188:0:0:0,-26.7917,-147.719	0/0:12:11,1:11:396:1:36:0,-0.0140849,-15.2245	0/0:203:201,2:201:7153:2:72:0,-54.2724,-459.505	0/0:105:105,0:105:3748:0:0:0,-31.6081,-266.948	0/0:17:17,0:17:604:0:0:0,-5.11751,-33.8901	0/0:245:240,5:240:8558:5:176:0,-57.5673,-606.614	0/0:211:211,0:211:7560:0:0:0,-63.5173,-315.73	0/0:118:118,0:118:4220:0:0:0,-35.5215,-194.115	0/0:38:37,1:37:1315:1:36:0,-10.4401,-91.8104	0/0:106:106,0:106:3779:0:0:0,-31.9092,-253.077	0/1:99:77,22:77:2733:22:767:-39.5408,0,-98.0543	0/0:35:35,0:35:1256:0:0:0,-10.536,-61.45	0/1:139:101,38:101:3584:38:1333:-78.4174,0,-163.234	0/1:36:27,9:27:968:9:315:-17.8501,0,-37.4769	0/0:50:50,0:50:1779:0:0:0,-15.0515,-69.711	0/1:108:81,27:81:2900:27:942:-52.5802,0,-87.1151	0/0:34:34,0:34:1205:0:0:0,-10.235,-86.9177	0/1:86:66,20:66:2352:20:698:-37.2347,0,-93.5387	0/0:72:72,0:72:2584:0:0:0,-21.6742,-112.336	0/1:56:43,13:43:1540:13:445:-23.5153,0,-60.8281	0/0:96:96,0:96:3396:0:0:0,-28.8989,-144.645	0/0:155:155,0:155:5506:0:0:0,-46.6596,-329.755	0/1:76:41,35:41:1460:35:1224:-87.5747,0,-85.7869	0/1:52:45,7:45:1608:7:243:-6.55392,0,-59.9517	0/0:80:80,0:80:2848:0:0:0,-24.0824,-207.602	0/0:75:75,0:75:2676:0:0:0,-22.5772,-130.288	0/0:49:49,0:49:1724:0:0:0,-14.7505,-82.5015	0/0:96:96,0:96:3401:0:0:0,-28.8989,-156.962	0/0:100:99,1:99:3512:1:36:0,-26.5047,-162.148	0/0:66:66,0:66:2356:0:0:0,-19.868,-122.77	0/1:108:81,27:81:2896:27:927:-51.2271,0,-103.747	0/0:96:96,0:96:3444:0:0:0,-28.8989,-206.631	0/0:60:60,0:60:2148:0:0:0,-18.0618,-94.2019	0/1:112:89,23:89:3169:23:828:-41.1288,0,-125.279	0/0:20:19,1:19:680:1:36:0,-2.42232,-23.8122	0/0:26:26,0:26:924:0:0:0,-7.82678,-44.8616	0/1:150:123,27:123:4396:27:932:-39.0328,0,-183.584	0/1:101:76,25:76:2712:25:889:-49.8795,0,-111.533	0/0:59:59,0:59:2096:0:0:0,-17.7608,-109.324	0/0:24:24,0:24:852:0:0:0,-7.22472,-62.8287	0/0:50:50,0:50:1779:0:0:0,-15.0515,-78.1056	0/0:175:174,1:174:6161:1:36:0,-49.082,-367.755	0/0:51:51,0:51:1815:0:0:0,-15.3525,-129.987	0/1:28:18,10:18:644:10:345:-22.944,0,-37.971	0/0:126:126,0:126:4500:0:0:0,-37.9298,-230.524	0/0:52:52,0:52:1864:0:0:0,-15.6536,-96.2965	0/1:98:70,28:70:2468:28:966:-57.7381,0,-152.97	0/1:34:27,7:27:972:7:252:-12.7939,0,-60.9126	0/0:175:174,1:174:6224:1:36:0,-49.082,-438.591	0/0:67:67,0:67:2408:0:0:0,-20.169,-111.926	0/0:42:42,0:42:1500:0:0:0,-12.6433,-108.861	0/0:141:141,0:141:5044:0:0:0,-42.4452,-216.653	0/0:57:57,0:57:2036:0:0:0,-17.1587,-90.6014	0/0:53:53,0:53:1892:0:0:0,-15.9546,-83.1371	0/0:23:23,0:23:824:0:0:0,-6.92369,-40.1114	0/0:94:93,0:93:3302:0:0:0,-27.9958,-139.848	0/1:10:7,3:7:248:3:84:-4.82784,0,-15.6071	0/0:32:32,0:32:1148:0:0:0,-9.63296,-79.5185	0/0:35:35,0:35:1239:0:0:0,-10.536,-93.6326	0/0:100:100,0:100:3572:0:0:0,-30.103,-206.079	0/1:221:199,22:199:7106:22:765:-2.6401,0,-369.441	0/1:58:39,19:39:1400:19:629:-39.4574,0,-60.0332	0/0:60:60,0:60:2140:0:0:0,-18.0618,-108.782	0/0:83:83,0:83:2963:0:0:0,-24.9855,-131.576
chr04	2595993	.	C	T	5721.17	PASS	AB=0.450139;ABP=112.149;AC=65;AF=0.345745;AN=188;AO=2371;CIGAR=1X;DP=7415;DPB=7415;DPRA=1.78448;EPP=5151.57;EPPR=10929.9;GTI=34;LEN=1;MEANALT=1.09756;MQM=25.4926;MQMR=25.9384;NS=94;NUMALT=1;ODDS=1.41894;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79469;QR=180063;RO=5036;RPL=2371;RPP=5151.57;RPPR=10929.9;RPR=0;RUN=1;SAF=0;SAP=5151.57;SAR=2371;SRF=0;SRP=10938.5;SRR=5036;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:26,10:26:936:10:341:-19.901,0,-57.5029	0/0:59:59,0:59:2124:0:0:0,-17.7608,-154.127	0/0:78:76,2:76:2720:2:72:0,-16.6436,-190.116	0/1:125:73,52:73:2605:52:1627:-19.9346,0,-121.459	0/1:70:22,48:22:792:48:1617:-33.0492,0,-31.6735	0/0:34:34,0:34:1216:0:0:0,-10.235,-89.3097	0/1:79:40,39:40:1432:39:1342:-55.8489,0,-61.2333	0/0:33:31,2:31:1116:2:72:0,-3.54817,-75.5615	0/1:56:37,19:37:1324:19:680:-44.6551,0,-80.1277	0/1:54:24,30:24:864:30:993:-17.7297,0,-36.8566	0/0:87:64,23:64:2281:23:794:0,-1.44021,-112.747	0/0:41:41,0:41:1472:0:0:0,-12.3422,-105.626	0/1:54:34,20:34:1220:20:678:-45.0698,0,-73.8343	0/1:55:25,30:25:892:30:989:-15.0764,0,-41.8872	0/1:51:22,29:22:792:29:994:-45.3264,0,-31.8807	0/1:47:34,13:34:1216:13:426:-14.4026,0,-66.6842	0/0:18:18,0:18:640:0:0:0,-5.41854,-47.2918	0/0:11:11,0:11:396:0:0:0,-3.31133,-28.1	0/1:20:13,7:13:468:7:218:-13.8955,0,-28.2018	0/1:92:45,47:45:1612:47:1521:-64.0184,0,-69.1722	0/1:126:73,53:73:2605:53:1704:-58.114,0,-135.211	0/1:86:49,37:49:1764:37:1290:-65.1617,0,-53.8088	0/1:109:60,48:60:2137:48:1580:-65.094,0,-96.0369	0/1:64:18,46:18:640:46:1534:-26.8047,0,-23.4745	0/1:50:34,16:34:1216:16:538:-6.44575,0,-67.2409	0/1:181:104,77:104:3732:77:2620:-109.527,0,-118.326	0/1:173:98,75:98:3516:75:2567:-90.2833,0,-181.626	0/1:23:15,8:15:540:8:268:-0.362405,0,-29.7936	0/1:133:73,60:73:2620:60:2079:-82.839,0,-83.2967	0/1:106:68,38:68:2436:38:1230:-17.4241,0,-129.973	0/1:87:47,40:47:1676:40:1393:-18.5493,0,-75.4045	0/1:14:12,2:12:428:2:72:-0.15301,0,-18.1854	0/0:210:200,10:200:7149:10:333:0,-47.5037,-458.692	0/0:108:108,0:108:3869:0:0:0,-32.5112,-273.571	0/0:17:17,0:17:608:0:0:0,-5.11751,-33.9943	0/0:248:244,4:244:8725:4:144:0,-61.3418,-618.896	0/1:202:87,114:87:3109:114:3655:-93.3659,0,-87.4785	0/1:115:60,55:60:2140:55:1798:-14.9304,0,-107.457	0/0:38:38,0:38:1368:0:0:0,-11.4391,-94.173	0/0:106:105,1:105:3749:1:36:0,-29.0064,-245.802	0/1:90:37,53:37:1313:53:1683:-62.1488,0,-61.023	0/1:36:21,15:21:752:15:457:-3.73029,0,-38.0581	0/1:139:79,60:79:2821:60:1958:-91.1769,0,-147.378	0/1:36:17,19:17:608:19:645:-28.6439,0,-26.6473	0/1:47:15,32:15:540:32:956:-19.8793,0,-18.8561	0/1:102:34,68:34:1220:68:2382:-105.236,0,-26.3594	0/0:36:35,1:35:1252:1:36:0,-7.24785,-86.5633	0/1:84:43,41:43:1529:41:1422:-60.9144,0,-71.8632	0/1:68:33,35:33:1184:35:1186:-17.1102,0,-50.0476	0/1:54:31,23:31:1116:23:801:-31.776,0,-51.2711	0/1:88:30,58:30:1042:58:1975:-53.7188,0,-26.8143	0/0:160:159,1:159:5666:1:32:0,-46.9688,-338.145	0/1:71:39,32:39:1396:32:1050:-73.2244,0,-81.8238	0/1:53:36,17:36:1284:17:593:-20.7829,0,-46.515	0/0:82:82,0:82:2902:0:0:0,-24.6845,-211.568	0/1:71:42,29:42:1504:29:964:-4.68967,0,-81.2255	0/1:50:31,19:31:1108:19:627:-5.42697,0,-50.4941	0/0:97:97,0:97:3446:0:0:0,-29.1999,-158.436	0/0:101:93,7:93:3325:7:229:0,-19.1358,-146.039	0/1:65:42,23:42:1508:23:786:-1.15618,0,-80.426	0/1:101:46,55:46:1652:55:1914:-76.4171,0,-69.5997	0/0:99:97,2:97:3473:2:72:0,-27.525,-208.361	0/1:58:26,32:26:928:32:1086:-28.0503,0,-28.5655	0/1:111:59,52:59:2097:52:1696:-63.0398,0,-95.3328	0/1:18:7,11:7:252:11:388:-4.56896,0,-9.85819	0/1:24:15,9:15:532:9:312:-2.50458,0,-24.9879	0/1:146:91,55:91:3261:55:1820:-64.1444,0,-149.747	0/1:102:59,43:59:2116:43:1423:-62.6362,0,-96.8617	0/0:56:38,17:38:1355:17:559:0,-1.49177,-70.9235	0/0:24:24,0:24:856:0:0:0,-7.22472,-63.1023	0/1:47:30,17:30:1061:17:570:-8.54161,0,-36.701	0/0:177:174,2:174:6194:2:57:0,-48.6936,-366.118	0/0:48:46,2:46:1652:2:72:0,-8.6089,-112.772	0/1:28:18,10:18:644:10:329:-21.4833,0,-37.971	0/1:123:81,42:81:2900:42:1430:-1.01192,0,-157.254	0/1:52:35,17:35:1252:17:585:-2.75253,0,-62.0002	0/1:104:76,27:76:2716:27:833:-43.9172,0,-166.493	0/1:34:27,7:27:968:7:237:-11.424,0,-60.8086	0/0:181:180,1:180:6419:1:36:0,-50.8882,-448.857	0/1:65:34,31:34:1220:31:1029:-8.27058,0,-62.5711	0/0:47:46,1:46:1652:1:36:0,-11.4998,-117.246	0/1:139:61,78:61:2192:78:2697:-41.7322,0,-88.8717	0/1:53:27,26:27:957:26:883:-11.7318,0,-41.6301	0/1:50:23,27:23:828:27:938:-14.3718,0,-35.6293	0/1:22:12,10:12:432:10:356:-4.28041,0,-19.6388	0/1:90:35,55:35:1241:55:1881:-32.7989,0,-49.0933	0/1:11:7,4:7:248:4:136:-9.26421,0,-15.3631	0/0:33:33,0:33:1184:0:0:0,-9.93399,-82.3309	0/0:34:31,3:31:1116:3:108:0,-0.15985,-71.5477	0/0:98:81,17:81:2904:17:581:0,-14.1477,-173.914	0/1:226:180,46:180:6448:46:1598:-27.6016,0,-355.148	0/1:54:29,25:29:1036:25:823:-42.925,0,-48.1696	0/1:56:39,17:39:1396:17:585:-1.45862,0,-68.1706	0/1:77:34,42:34:1220:42:1412:-25.4134,0,-49.4776
chr04	2744371	.	GCCGTG	CCCATG,GCCATA	158866	PASS	AB=0.741794,0.251204;ABP=1163.37,1231.55;AC=154,34;AF=0.819149,0.180851;AN=188;AO=6764,613;CIGAR=1X2M1X2M,3M1X1M1X;DP=7430;DPB=7430.67;DPRA=0,0.789397;EPP=14690.8,1334.12;EPPR=0;GTI=10;LEN=6,6;MEANALT=1.94681,2.41463;MQM=59.9342,59.9625;MQMR=0;NS=94;NUMALT=2;ODDS=1234.38;PAIRED=0,0;PAIREDR=0;PAO=0,4;PQA=0,144;PQR=0;PRO=0;QA=238429,21756;QR=0;RO=0;RPL=0,0;RPP=14690.8,1334.12;RPPR=0;RPR=6764,613;RUN=1,1;SAF=6764,613;SAP=14690.8,1334.12;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:23:0,16,7:0:0:16,7:571,244:-66.7476,-20.1916,-15.3752,-46.9069,0,-44.7997	1/1:40:0,40,0:0:0:40,0:1390,0:-125.395,-12.0412,0,-125.395,-12.0412,-125.395	1/1:183:0,182,0:0:0:182,0:6407,0:-576.419,-54.7875,0,-576.419,-54.7875,-576.419	1/1:165:0,164,0:0:0:164,0:5784,0:-520.32,-49.3689,0,-520.32,-49.3689,-520.32	1/1:32:0,32,0:0:0:32,0:1136,0:-102.548,-9.63296,0,-102.548,-9.63296,-102.548	1/1:35:0,35,0:0:0:35,0:1234,0:-111.363,-10.5361,0,-111.363,-10.5361,-111.363	1/2:53:0,44,9:0:0:44,9:1562,324:-154.063,-26.7966,-13.5513,-127.626,0,-124.917	1/1:147:0,146,0:0:0:146,0:5159,0:-464.093,-43.9504,0,-464.093,-43.9504,-464.093	1/2:66:0,44,20:0:0:44,20:1551,720:-185.095,-58.8119,-45.5665,-126.343,0,-120.323	1/1:109:0,106,0:0:0:106,0:3720,0:-334.659,-31.9092,0,-334.659,-31.9092,-334.659	1/1:152:0,152,0:0:0:152,0:5337,0:-480.471,-45.7566,0,-480.471,-45.7566,-480.471	1/1:108:0,108,0:0:0:108,0:3789,0:-341.21,-32.5112,0,-341.21,-32.5112,-341.21	1/2:97:0,50,46:0:0:50,46:1755,1621:-274.798,-131.969,-116.918,-142.82,0,-128.973	1/1:147:0,146,0:0:0:146,0:5103,0:-459.062,-43.9504,0,-459.062,-43.9504,-459.062	1/2:54:0,26,28:0:0:26,28:912,996:-155.735,-81.5257,-73.6989,-74.5626,0,-66.1337	1/2:68:0,34,34:0:0:34,34:1206,1183:-194.782,-96.5366,-86.3016,-98.5967,0,-88.3617	1/1:88:0,88,0:0:0:88,0:3102,0:-279.047,-26.4906,0,-279.047,-26.4906,-279.047	1/1:57:0,57,0:0:0:57,0:2020,0:-182.071,-17.1587,0,-182.071,-17.1587,-182.071	1/2:56:0,32,24:0:0:32,24:1115,855:-160.706,-70.0463,-60.4134,-91.0121,0,-83.7874	1/2:113:0,102,11:0:0:102,11:3554,396:-321.677,-32.6714,-1.96636,-289.364,0,-286.053	1/2:66:0,56,9:0:0:56,9:1995,324:-189.103,-26.4906,-9.63296,-162.666,0,-159.957	1/1:28:0,26,2:0:0:26,2:932,72:-83.8395,-7.82678,0,-77.9645,-1.59212,-77.3625	1/2:59:0,47,12:0:0:47,12:1655,428:-169.979,-35.2467,-21.0982,-135.088,0,-131.476	1/1:35:0,34,1:0:0:34,1:1199,36:-107.856,-10.235,0,-104.918,-6.93778,-104.617	1/2:33:0,25,8:0:0:25,8:870,288:-94.5907,-23.8592,-16.3334,-71.0884,0,-68.6802	1/2:154:0,130,23:0:0:130,23:4622,818:-443.323,-66.6655,-27.5316,-376.663,0,-369.739	1/2:118:0,98,20:0:0:98,20:3451,709:-339.062,-58.1155,-28.6145,-281.301,0,-275.28	1/1:21:0,21,0:0:0:21,0:750,0:-67.8255,-6.32163,0,-67.8255,-6.32163,-67.8255	1/1:152:0,139,12:0:0:139,12:4885,424:-439.456,-41.8432,0,-404.926,-7.319,-401.313	1/1:115:0,106,8:0:0:106,8:3759,288:-338.152,-31.9092,0,-314.652,-8.40984,-312.244	1/1:103:0,103,0:0:0:103,0:3631,0:-326.909,-31.0061,0,-326.909,-31.0061,-326.909	1/1:5:0,5,0:0:0:5,0:173,0:-15.9093,-1.50515,0,-15.9093,-1.50515,-15.9093	1/1:16:0,16,0:0:0:16,0:569,0:-51.5421,-4.81648,0,-51.5421,-4.81648,-51.5421	1/1:7:0,7,0:0:0:7,0:246,0:-22.4236,-2.10721,0,-22.4236,-2.10721,-22.4236	1/1:6:0,6,0:0:0:6,0:208,0:-19.0588,-1.80618,0,-19.0588,-1.80618,-19.0588	1/2:12:0,9,3:0:0:9,3:312,108:-34.5182,-9.17208,-6.46281,-25.7027,0,-24.7996	1/1:191:0,190,0:0:0:190,0:6712,0:-603.801,-57.1957,0,-603.801,-57.1957,-603.801	1/1:124:0,124,0:0:0:124,0:4358,0:-392.402,-37.3277,0,-392.402,-37.3277,-392.402	1/1:99:0,98,0:0:0:98,0:3495,0:-314.397,-29.5009,0,-314.397,-29.5009,-314.397	1/2:4:0,2,1:0:0:2,1:71,36:-8.77997,-2.97734,-2.37528,-5.83507,0,-5.53404	1/2:91:0,77,14:0:0:77,14:2726,502:-263.35,-41.3028,-18.1235,-222.405,0,-218.19	1/1:47:0,47,0:0:0:47,0:1641,0:-147.976,-14.1484,0,-147.976,-14.1484,-147.976	1/2:73:0,61,12:0:0:61,12:2139,425:-209.036,-34.9743,-16.6114,-174.415,0,-170.803	1/2:56:0,30,25:0:0:30,25:1077,898:-161.109,-73.2552,-64.2243,-87.8525,0,-80.3268	1/1:61:0,61,0:0:0:61,0:2156,0:-194.289,-18.3628,0,-194.289,-18.3628,-194.289	1/2:57:0,39,18:0:0:39,18:1369,638:-163.743,-52.3297,-40.5895,-111.767,0,-106.348	1/1:119:0,117,0:0:0:117,0:4115,0:-370.155,-35.2205,0,-370.155,-35.2205,-370.155	1/2:87:0,72,15:0:0:72,15:2561,535:-252.41,-43.9688,-22.2947,-208.797,0,-204.282	1/1:74:0,72,0:0:0:72,0:2492,0:-224.232,-21.6742,0,-224.232,-21.6742,-224.232	1/1:109:0,100,9:0:0:100,9:3514,314:-316.123,-30.103,0,-290.584,-4.21562,-287.875	1/1:65:0,62,0:0:0:62,0:2205,0:-198.405,-18.6639,0,-198.405,-18.6639,-198.405	1/1:4:0,4,0:0:0:4,0:132,0:-12.206,-1.20412,0,-12.206,-1.20412,-12.206	1/2:76:0,68,8:0:0:68,8:2404,284:-219.289,-23.4953,-3.02529,-196.148,0,-193.74	1/2:42:0,38,4:0:0:38,4:1336,144:-120.849,-12.1095,-0.670357,-109.099,0,-107.895	1/1:11:0,11,0:0:0:11,0:384,0:-34.8933,-3.31133,0,-34.8933,-3.31133,-34.8933	1/1:160:0,160,0:0:0:160,0:5623,0:-506.196,-48.1648,0,-506.196,-48.1648,-506.196	1/1:8:0,8,0:0:0:8,0:278,0:-25.3569,-2.40824,0,-25.3569,-2.40824,-25.3569	1/1:9:0,9,0:0:0:9,0:323,0:-29.4151,-2.70927,0,-29.4151,-2.70927,-29.4151	1/2:7:0,6,1:0:0:6,1:214,36:-20.7395,-3.29724,-1.49106,-17.8016,0,-17.5006	1/1:130:0,129,0:0:0:129,0:4508,0:-405.59,-38.8329,0,-405.59,-38.8329,-405.59	1/2:108:0,77,30:0:0:77,30:2730,1061:-308.822,-86.4106,-63.2313,-222.405,0,-213.374	1/1:9:0,9,0:0:0:9,0:317,0:-28.8699,-2.70927,0,-28.8699,-2.70927,-28.8699	1/1:127:0,126,0:0:0:126,0:4489,0:-403.751,-37.9298,0,-403.751,-37.9298,-403.751	1/2:109:0,87,21:0:0:87,21:3058,748:-309.869,-60.9634,-34.7738,-248.902,0,-242.58	1/2:65:0,49,16:0:0:49,16:1733,568:-187.785,-46.6348,-31.8844,-141.505,0,-136.688	1/1:82:0,82,0:0:0:82,0:2916,0:-262.671,-24.6845,0,-262.671,-24.6845,-262.671	1/2:72:0,55,15:0:0:55,15:1929,540:-201.077,-44.1053,-27.5486,-157.013,0,-152.498	1/1:79:0,72,6:0:0:72,6:2514,214:-226.16,-21.6742,0,-208.714,-4.19773,-206.908	1/1:110:0,108,0:0:0:108,0:3790,0:-340.944,-32.5112,0,-340.944,-32.5112,-340.944	1/1:64:0,61,0:0:0:61,0:2144,0:-192.908,-18.3628,0,-192.908,-18.3628,-192.908	1/1:69:0,69,0:0:0:69,0:2435,0:-219.134,-20.7711,0,-219.134,-20.7711,-219.134	1/2:20:0,13,5:0:0:13,5:460,178:-51.9707,-14.5048,-10.5914,-37.4627,0,-35.9575	1/1:167:0,167,0:0:0:167,0:5883,0:-529.591,-50.272,0,-529.591,-50.272,-529.591	1/2:41:0,31,9:0:0:31,9:1087,313:-114.002,-25.5366,-16.2046,-88.5536,0,-85.8443	1/1:226:0,225,0:0:0:225,0:7948,0:-714.991,-67.7318,0,-714.991,-67.7318,-714.991	1/1:107:0,107,0:0:0:107,0:3755,0:-338.153,-32.2102,0,-338.153,-32.2102,-338.153	1/2:88:0,75,12:0:0:75,12:2645,422:-249.689,-34.3391,-11.7618,-215.343,0,-211.731	1/2:72:0,59,12:0:0:59,12:2100,432:-206.399,-35.249,-17.4882,-171.149,0,-167.537	1/1:14:0,13,1:0:0:13,1:467,36:-42.0094,-3.91339,0,-39.072,-0.616145,-38.7709	1/1:86:0,86,0:0:0:86,0:3050,0:-274.731,-25.8886,0,-274.731,-25.8886,-274.731	1/1:101:0,101,0:0:0:101,0:3548,0:-319.527,-30.404,0,-319.527,-30.404,-319.527	1/1:138:0,136,0:0:0:136,0:4815,0:-433.187,-40.9401,0,-433.187,-40.9401,-433.187	1/1:64:0,64,0:0:0:64,0:2260,0:-203.663,-19.2659,0,-203.663,-19.2659,-203.663	1/1:93:0,93,0:0:0:93,0:3315,0:-298.57,-27.9958,0,-298.57,-27.9958,-298.57	1/1:50:0,49,0:0:0:49,0:1747,0:-157.254,-14.7505,0,-157.254,-14.7505,-157.254	1/1:146:0,144,0:0:0:144,0:5058,0:-455.053,-43.3483,0,-455.053,-43.3483,-455.053	1/2:25:0,14,11:0:0:14,11:475,391:-70.7268,-32.2179,-28.0035,-38.857,0,-35.5457	1/1:79:0,79,0:0:0:79,0:2793,0:-251.611,-23.7814,0,-251.611,-23.7814,-251.611	1/1:77:0,76,0:0:0:76,0:2708,0:-243.654,-22.8783,0,-243.654,-22.8783,-243.654	1/1:97:0,96,0:0:0:96,0:3363,0:-302.529,-28.8989,0,-302.529,-28.8989,-302.529	1/2:164:0,111,53:0:0:111,53:3926,1874:-472.739,-152.978,-119.563,-320.115,0,-304.16	1/2:56:0,18,38:0:0:18,38:636,1333:-160.625,-108.828,-103.409,-52.1497,0,-40.7106	1/1:104:0,102,0:0:0:102,0:3533,0:-317.847,-30.7051,0,-317.847,-30.7051,-317.847	1/1:94:0,93,0:0:0:93,0:3305,0:-297.303,-27.9958,0,-297.303,-27.9958,-297.303
chr04	2769482	.	GTT	CTC,GTC	228832	PASS	AB=0.561095,0.434917;ABP=181.844,205.956;AC=139,49;AF=0.739362,0.260638;AN=188;AO=8395,2413;CIGAR=1X1M1X,2M1X;DP=10834;DPB=10836;DPRA=0,1.07944;EPP=18232.5,5242.77;EPPR=9.52472;GTI=0;LEN=3,1;MEANALT=1.80851,2.35185;MQM=58.3575,59.1562;MQMR=60;NS=94;NUMALT=2;ODDS=0.602014;PAIRED=0,0;PAIREDR=0;PAO=6,0;PQA=216,0;PQR=0;PRO=0;QA=297270,86455;QR=108;RO=3;RPL=8395,2413;RPP=18232.5,5242.77;RPPR=9.52472;RPR=0,0;RUN=1,1;SAF=0,0;SAP=18232.5,5242.77;SAR=8395,2413;SRF=0;SRP=9.52472;SRR=3;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:22:0,22,0:0:0:22,0:771,0:-68.9971,-6.62266,0,-68.9971,-6.62266,-68.9971	1/2:99:0,61,38:0:0:61,38:2172,1368:-287.761,-111.775,-93.4124,-176.343,0,-164.904	1/2:146:0,71,75:0:0:71,75:2503,2681:-421.732,-218.935,-197.562,-203.15,0,-180.573	1/2:185:0,100,84:0:0:100,84:3516,3020:-525.025,-245.032,-214.929,-279.984,0,-254.698	1/1:54:0,54,0:0:0:54,0:1922,0:-172.027,-16.2556,0,-172.027,-16.2556,-172.027	1/1:46:0,46,0:0:0:46,0:1642,0:-147.898,-13.8474,0,-147.898,-13.8474,-147.898	1/2:149:0,86,63:0:0:86,63:3040,2258:-431.103,-184.109,-158.22,-247.35,0,-228.385	1/1:206:0,206,0:0:0:206,0:7316,0:-653.847,-62.0122,0,-653.847,-62.0122,-653.847	1/1:134:0,134,0:0:0:134,0:4771,0:-427.716,-40.338,0,-427.716,-40.338,-427.716	1/1:101:0,100,0:0:0:100,0:3550,0:-318.868,-30.103,0,-318.868,-30.103,-318.868	1/2:66:0,39,27:0:0:39,27:1399,968:-192.779,-79.2138,-67.4736,-113.923,0,-105.795	1/2:81:0,44,37:0:0:44,37:1573,1305:-234.661,-106.592,-93.3467,-128.423,0,-117.285	1/2:87:0,43,44:0:0:43,44:1539,1576:-254.18,-128.862,-115.917,-125.676,0,-112.43	1/2:77:0,43,34:0:0:43,34:1530,1224:-224.551,-100.222,-87.2776,-124.686,0,-114.451	1/1:80:0,80,0:0:0:80,0:2835,0:-254.891,-24.0824,0,-254.891,-24.0824,-254.891	1/2:100:0,54,46:0:0:54,46:1919,1656:-291.53,-135.19,-118.935,-156.697,0,-142.85	1/2:81:0,36,45:0:0:36,45:1285,1616:-235.463,-132.182,-121.345,-103.636,0,-90.0898	1/2:66:0,35,31:0:0:35,31:1242,1112:-191.838,-90.816,-80.28,-101.378,0,-92.0464	1/1:55:0,55,0:0:0:55,0:1957,0:-175.965,-16.5567,0,-175.965,-16.5567,-175.965	1/2:178:0,100,78:0:0:100,78:3554,2774:-514.36,-225.69,-195.587,-289.024,0,-265.544	1/2:196:0,116,79:0:0:116,79:4083,2821:-557.955,-228.957,-194.038,-328.99,0,-305.209	1/1:163:0,162,0:0:0:162,0:5734,0:-514.626,-48.7669,0,-514.626,-48.7669,-514.626	1/2:83:1,37,44:1:36:37,44:1300,1576:-230.81,-125.554,-117.354,-102.664,0,-92.3564	1/1:131:0,124,7:0:0:124,7:4394,252:-394.407,-37.3277,0,-373.849,-16.4106,-371.742	1/2:92:0,47,44:0:0:47,44:1652,1584:-261.219,-129.286,-115.138,-132.008,0,-118.763	1/2:271:0,191,80:0:0:191,80:6727,2864:-780.495,-233.475,-175.978,-547.017,0,-522.934	1/1:290:0,289,0:0:0:289,0:10235,0:-917.536,-86.9977,0,-917.536,-86.9977,-917.536	1/2:37:0,18,19:0:0:18,19:646,684:-108.819,-56.1615,-50.743,-53.0169,0,-47.2973	1/2:259:0,148,111:0:0:148,111:5214,3988:-749.126,-325.282,-280.73,-424.199,0,-390.785	1/2:145:0,90,54:0:0:90,54:3185,1936:-416.092,-157.978,-130.885,-258.218,0,-241.962	1/1:122:0,122,0:0:0:122,0:4311,0:-387.407,-36.7257,0,-387.407,-36.7257,-387.407	1/2:23:0,15,8:0:0:15,8:519,288:-65.9897,-23.8592,-19.3437,-42.4854,0,-40.0772	1/1:30:0,30,0:0:0:30,0:1042,0:-94.0863,-9.0309,0,-94.0863,-9.0309,-94.0863	1/2:14:0,5,9:0:0:5,9:175,324:-40.8319,-26.5964,-25.0912,-14.588,0,-11.8787	1/2:5:0,2,3:0:0:2,3:70,108:-14.8546,-9.17208,-8.57002,-6.03607,0,-5.13298	1/1:22:0,22,0:0:0:22,0:775,0:-69.9917,-6.62266,0,-69.9917,-6.62266,-69.9917	1/1:215:0,215,0:0:0:215,0:7671,0:-690.043,-64.7215,0,-690.043,-64.7215,-690.043	1/1:272:0,271,1:0:0:271,1:9603,36:-858.198,-81.5791,0,-855.266,-78.287,-854.965	1/2:72:1,36,33:1:36:36,33:1269,1184:-196.086,-93.6436,-85.744,-99.8243,0,-92.828	1/1:13:0,13,0:0:0:13,0:466,0:-42.2787,-3.91339,0,-42.2787,-3.91339,-42.2787	1/2:167:0,99,68:0:0:99,68:3494,2444:-481.523,-199.734,-169.932,-282.145,0,-261.675	1/2:57:1,23,33:1:36:23,33:824,1188:-160.465,-93.8579,-89.8716,-63.9689,0,-56.9725	1/2:100:0,56,43:0:0:56,43:1976,1544:-283.917,-124.705,-107.847,-159.225,0,-146.28	1/2:71:0,48,23:0:0:48,23:1711,828:-207.21,-67.834,-53.3846,-139.734,0,-132.811	1/1:69:0,69,0:0:0:69,0:2411,0:-216.907,-20.7711,0,-216.907,-20.7711,-216.907	1/1:139:0,139,0:0:0:139,0:4932,0:-442.087,-41.8432,0,-442.087,-41.8432,-442.087	1/1:128:0,128,0:0:0:128,0:4551,0:-408.636,-38.5318,0,-408.636,-38.5318,-408.636	1/1:239:0,239,0:0:0:239,0:8418,0:-754.027,-71.9462,0,-754.027,-71.9462,-754.027	1/2:148:0,100,48:0:0:100,48:3557,1724:-429.182,-139.586,-109.483,-289.952,0,-275.502	1/2:158:0,105,53:0:0:105,53:3711,1896:-455.467,-154.944,-123.336,-300.879,0,-284.924	1/2:277:0,140,135:0:0:140,135:4887,4841:-791.111,-394.326,-352.182,-396.842,0,-356.203	1/1:19:0,19,0:0:0:19,0:680,0:-61.5018,-5.71957,0,-61.5018,-5.71957,-61.5018	1/1:181:0,181,0:0:0:181,0:6433,0:-577.48,-54.4864,0,-577.48,-54.4864,-577.48	1/2:49:0,33,16:0:0:33,16:1163,572:-140.755,-46.9937,-37.0597,-94.116,0,-89.2995	1/2:31:0,14,17:0:0:14,17:504,612:-91.3839,-50.2959,-46.0815,-41.4477,0,-36.3302	1/2:130:0,60,68:0:0:60,68:2091,2440:-367.596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chr04	2800647	.	CCGCC	TGGCT,CCGCT	168381	PASS	AB=0.624348,0.368116;ABP=466.361,524.227;AC=145,43;AF=0.771277,0.228723;AN=188;AO=6523,1274;CIGAR=2X2M1X,4M1X;DP=7856;DPB=7855.8;DPRA=0,0.982837;EPP=13830.8,2769.47;EPPR=7.35324;GTI=3;LEN=5,1;MEANALT=2.05319,2.57447;MQM=59.4188,59.9749;MQMR=60;NS=94;NUMALT=2;ODDS=0.467957;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=230240,45591;QR=72;RO=2;RPL=39,0;RPP=13830.8,2769.47;RPPR=7.35324;RPR=6484,1274;RUN=1,1;SAF=6523,1274;SAP=14167.5,2769.47;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:56:0,38,17:0:0:38,17:1356,612:-160.528,-49.9838,-38.5447,-110.591,0,-105.473	1/1:51:0,51,0:0:0:51,0:1815,0:-163.481,-15.3525,0,-163.481,-15.3525,-163.481	1/1:186:0,185,0:0:0:185,0:6549,0:-588.893,-55.6906,0,-588.893,-55.6906,-588.893	1/1:235:0,233,1:0:0:233,1:8163,36:-733.95,-70.14,0,-731.012,-67.2026,-730.711	1/1:88:0,87,0:0:0:87,0:3083,0:-277.341,-26.1896,0,-277.341,-26.1896,-277.341	1/1:39:0,38,0:0:0:38,0:1342,0:-120.806,-11.4391,0,-120.806,-11.4391,-120.806	1/2:75:0,55,18:0:0:55,18:1953,644:-211.71,-52.5799,-36.0232,-159.194,0,-153.775	1/1:142:0,140,1:0:0:140,1:4969,36:-446.841,-42.1442,0,-443.903,-39.2068,-443.602	1/2:76:0,38,38:0:0:38,38:1338,1352:-219.431,-110.541,-99.1021,-109.243,0,-97.8041	1/1:90:0,90,0:0:0:90,0:3184,0:-286.137,-27.0927,0,-286.137,-27.0927,-286.137	1/1:32:0,32,0:0:0:32,0:1142,0:-102.999,-9.63296,0,-102.999,-9.63296,-102.999	1/1:87:0,87,0:0:0:87,0:3074,0:-276.647,-26.1896,0,-276.647,-26.1896,-276.647	1/2:43:0,24,19:0:0:24,19:835,684:-124.047,-56.1708,-48.946,-68.231,0,-62.5115	1/1:53:0,49,0:0:0:49,0:1718,0:-154.575,-14.7505,0,-154.575,-14.7505,-154.575	1/2:45:0,26,19:0:0:26,19:934,684:-132.346,-56.1708,-48.344,-76.535,0,-70.8155	1/2:28:0,12,16:0:0:12,16:427,572:-81.7906,-46.9969,-43.3846,-35.15,0,-30.3336	1/1:30:0,30,0:0:0:30,0:1035,0:-93.4521,-9.0309,0,-93.4521,-9.0309,-93.4521	1/1:21:0,21,0:0:0:21,0:753,0:-68.0438,-6.32163,0,-68.0438,-6.32163,-68.0438	1/2:19:0,10,9:0:0:10,9:357,324:-55.9001,-26.7966,-23.7863,-29.4619,0,-26.7526	1/2:93:0,60,33:0:0:60,33:2100,1188:-268.121,-97.2946,-79.2328,-171.182,0,-161.248	1/2:81:0,63,18:0:0:63,18:2208,635:-231.622,-52.0584,-33.0935,-179.916,0,-174.497	1/2:166:0,67,98:0:0:67,98:2358,3520:-479.178,-287.276,-267.107,-192.024,0,-162.523	1/2:91:0,58,33:0:0:58,33:2051,1175:-263.123,-96.123,-78.6632,-167.355,0,-157.421	1/1:52:0,50,1:0:0:50,1:1751,36:-157.512,-15.0515,0,-154.574,-12.1141,-154.273	1/2:92:0,73,19:0:0:73,19:2576,672:-264.75,-55.0854,-33.1102,-210.018,0,-204.298	1/2:251:0,163,87:0:0:163,87:5764,3110:-723.009,-253.577,-204.509,-469.429,0,-443.24	1/2:152:0,89,61:0:0:89,61:3137,2188:-433.882,-178.522,-151.73,-255.414,0,-237.052	1/1:14:0,14,0:0:0:14,0:497,0:-44.8736,-4.21442,0,-44.8736,-4.21442,-44.8736	1/2:241:0,127,113:0:0:127,113:4502,4040:-696.161,-329.405,-291.174,-366.752,0,-332.736	1/2:109:0,72,36:0:0:72,36:2525,1288:-310.456,-105.027,-83.3526,-205.424,0,-194.587	1/1:126:0,126,0:0:0:126,0:4445,0:-400.045,-37.9298,0,-400.045,-37.9298,-400.045	1/2:7:0,2,5:0:0:2,5:63,180:-20.0997,-15.0469,-14.4449,-5.38048,0,-3.87533	1/2:21:0,12,9:0:0:12,9:429,324:-61.7751,-26.7966,-23.1842,-35.3373,0,-32.628	1/1:6:0,6,0:0:0:6,0:209,0:-19.1501,-1.80618,0,-19.1501,-1.80618,-19.1501	1/1:20:0,20,0:0:0:20,0:704,0:-63.4721,-6.0206,0,-63.4721,-6.0206,-63.4721	1/2:18:0,7,11:0:0:7,11:246,392:-52.3122,-32.3087,-30.2015,-20.3565,0,-17.0452	1/1:132:0,132,0:0:0:132,0:4669,0:-420.292,-39.736,0,-420.292,-39.736,-420.292	1/1:187:0,186,0:0:0:186,0:6540,0:-588.024,-55.9916,0,-588.024,-55.9916,-588.024	1/1:22:0,22,0:0:0:22,0:768,0:-69.3386,-6.62266,0,-69.3386,-6.62266,-69.3386	1/2:5:0,1,4:0:0:1,4:30,144:-14.4809,-12.1095,-11.8085,-2.68203,0,-1.47791	1/2:114:0,75,39:0:0:75,39:2668,1383:-330.454,-113.023,-90.446,-217.786,0,-206.046	1/1:20:0,20,0:0:0:20,0:717,0:-64.8582,-6.0206,0,-64.8582,-6.0206,-64.8582	1/2:190:0,132,58:0:0:132,58:4659,2073:-548.739,-169.379,-129.643,-379.716,0,-362.256	1/2:24:0,15,9:0:0:15,9:534,318:-69.7759,-26.2514,-21.736,-43.8787,0,-41.1694	1/1:35:0,35,0:0:0:35,0:1249,0:-112.69,-10.5361,0,-112.69,-10.5361,-112.69	1/2:88:0,58,29:0:0:58,29:2043,1015:-248.936,-82.6675,-65.2077,-166.356,0,-157.626	1/1:164:2,158,0:2:72:158,0:5601,0:-497.163,-41.6808,0,-497.765,-47.5627,-503.64	1/2:110:0,74,35:0:0:74,35:2638,1244:-316.425,-101.398,-79.1218,-215.052,0,-204.515	1/1:118:0,116,0:0:0:116,0:4094,0:-368.376,-34.9195,0,-368.376,-34.9195,-368.376	1/2:114:0,85,29:0:0:85,29:2991,1036:-328.299,-84.824,-59.2365,-243.831,0,-235.101	1/1:151:0,148,0:0:0:148,0:5214,0:-469.073,-44.5524,0,-469.073,-44.5524,-469.073	1/2:9:0,5,3:0:0:5,3:177,108:-23.2272,-8.81263,-7.30748,-14.4133,0,-13.5102	1/2:113:0,83,29:0:0:83,29:2949,1044:-325.331,-85.187,-60.2015,-240.145,0,-231.415	1/2:68:0,40,26:0:0:40,26:1417,932:-191.428,-76.0171,-63.9759,-115.413,0,-107.586	1/1:23:0,23,0:0:0:23,0:818,0:-73.9417,-6.92369,0,-73.9417,-6.92369,-73.9417	1/1:171:0,171,0:0:0:171,0:6026,0:-542.232,-51.4761,0,-542.232,-51.4761,-542.232	1/1:47:0,47,0:0:0:47,0:1643,0:-1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chr04	2800678	.	A	T	19117.2	PASS	AB=0.388288;ABP=363.968;AC=43;AF=0.228723;AN=188;AO=1300;CIGAR=1X;DP=7477;DPB=7477;DPRA=1.09059;EPP=2825.92;EPPR=13405.3;GTI=2;LEN=1;MEANALT=1.02041;MQM=59.9423;MQMR=59.4875;NS=94;NUMALT=1;ODDS=2.10656;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46492;QR=217363;RO=6172;RPL=1300;RPP=2825.92;RPPR=13405.3;RPR=0;RUN=1;SAF=1300;SAP=2825.92;SAR=0;SRF=6172;SRP=13405.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:38,17:38:1368:17:608:-38.4954,0,-106.847	0/0:49:48,0:48:1705:0:0:0,-14.4494,-153.005	0/0:169:167,2:167:5858:2:72:0,-44.0744,-520.479	0/0:223:222,1:222:7876:1:36:0,-63.5314,-704.09	0/0:82:82,0:82:2902:0:0:0,-24.6845,-261.388	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.344	0/1:72:54,18:54:1906:18:642:-36.4356,0,-150.133	0/0:137:136,1:136:4777:1:36:0,-37.6428,-426.304	0/1:73:36,37:36:1246:37:1319:-97.036,0,-90.4264	0/0:86:86,0:86:3035:0:0:0,-25.8886,-271.991	0/0:28:27,0:27:929:0:0:0,-8.12781,-83.5245	0/0:81:81,0:81:2874:0:0:0,-24.3834,-258.472	0/1:44:25,19:25:884:19:684:-48.645,0,-66.624	0/0:50:50,0:50:1750:0:0:0,-15.0515,-157.746	0/1:42:24,18:24:860:18:648:-46.0086,0,-65.0601	0/1:28:12,16:12:424:16:576:-43.7461,0,-30.0604	0/0:27:27,0:27:956:0:0:0,-8.12781,-86.3516	0/0:20:20,0:20:667:0:0:0,-6.0206,-60.2857	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/1:94:60,34:60:2140:34:1216:-81.4497,0,-164.531	0/1:77:59,18:59:2104:18:648:-35.4726,0,-166.426	0/1:163:62,101:62:2167:101:3606:-275.677,0,-146.135	0/1:89:53,34:53:1858:34:1194:-81.2144,0,-140.933	0/0:50:49,1:49:1737:1:32:0,-11.8522,-153.396	0/1:87:70,17:70:2474:17:612:-29.2238,0,-196.536	0/1:243:156,87:156:5504:87:3120:-207.874,0,-422.271	0/1:147:84,63:84:2989:63:2239:-157.522,0,-224.931	0/0:14:14,0:14:496:0:0:0,-4.21442,-44.7831	0/1:238:122,116:122:4306:116:4158:-302.72,0,-316.06	0/1:102:65,37:65:2290:37:1328:-89.1172,0,-175.614	0/0:122:122,0:122:4326:0:0:0,-36.7257,-389.384	0/1:7:1,6:1:36:6:212:-17.3176,0,-1.49106	0/1:19:10,9:10:360:9:320:-23.4228,0,-27.0247	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:16:16,0:16:508:0:0:0,-4.81648,-45.8667	0/1:17:6,11:6:197:11:388:-30.1393,0,-12.9338	0/0:130:129,0:129:4496:0:0:0,-38.8329,-404.351	0/0:173:173,0:173:6072:0:0:0,-52.0782,-546.535	0/0:19:19,0:19:665:0:0:0,-5.71957,-60.1163	0/1:5:1,4:1:27:4:144:-11.8085,0,-1.18629	0/1:108:70,38:70:2451:38:1363:-90.4547,0,-188.322	0/0:20:20,0:20:686:0:0:0,-6.0206,-62.0557	0/1:181:120,61:120:4205:61:2168:-140.899,0,-324.122	0/1:22:15,7:15:532:7:248:-16.0415,0,-41.5904	0/0:31:31,0:31:1062:0:0:0,-9.33193,-95.8644	0/1:87:55,32:55:1949:32:1152:-77.8005,0,-149.485	0/0:147:147,0:147:5104:0:0:0,-44.2514,-459.317	0/1:103:68,35:68:2402:35:1243:-81.1684,0,-185.417	0/0:115:115,0:115:4092:0:0:0,-34.6184,-366.703	0/1:111:81,30:81:2832:30:1072:-63.3781,0,-221.695	0/0:143:143,0:143:5067:0:0:0,-43.0473,-456.055	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0766	0/1:110:80,30:80:2849:30:1071:-63.5883,0,-223.469	0/1:63:36,27:36:1292:27:968:-68.4725,0,-97.6133	0/0:22:22,0:22:750:0:0:0,-6.62266,-67.8124	0/0:159:159,0:159:5579:0:0:0,-47.8638,-501.976	0/0:43:43,0:43:1503:0:0:0,-12.9443,-135.466	0/0:5:5,0:5:161:0:0:0,-1.50515,-14.8066	0/1:25:20,5:20:720:5:180:-9.02631,0,-57.603	0/0:100:100,0:100:3558:0:0:0,-30.103,-320.115	0/1:76:46,30:46:1633:30:1076:-74.2746,0,-124.351	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.0196	0/0:183:183,0:183:6351:0:0:0,-55.0885,-571.658	0/1:145:98,47:98:3459:47:1675:-107.387,0,-267.793	0/1:47:28,19:28:992:19:680:-47.3808,0,-75.2997	0/0:110:110,0:110:3867:0:0:0,-33.1133,-347.942	0/1:148:89,59:89:3150:59:2120:-146.511,0,-239.137	0/1:70:39,31:39:1355:31:1116:-79.6796,0,-101.161	0/0:14:13,1:13:441:1:32:0,-1.01511,-36.7738	0/0:59:59,0:59:2074:0:0:0,-17.7608,-186.799	0/0:29:29,0:29:1000:0:0:0,-8.72987,-90.3048	0/1:19:14,5:14:481:5:180:-10.8325,0,-37.8909	0/0:165:165,0:165:5852:0:0:0,-49.6699,-526.444	0/1:66:47,19:47:1650:19:684:-42.0223,0,-128.706	0/0:128:128,0:128:4543:0:0:0,-38.5318,-408.917	0/0:127:127,0:127:4511:0:0:0,-38.2308,-406.064	0/1:146:90,56:90:3118:56:2003:-136.592,0,-236.817	0/1:57:27,30:27:941:30:1067:-79.1825,0,-67.8182	0/1:19:11,8:11:392:8:288:-20.5478,0,-28.9554	0/0:130:130,0:130:4580:0:0:0,-39.1339,-412.289	0/0:136:135,1:135:4734:1:36:0,-37.3613,-422.071	0/0:206:206,0:206:7212:0:0:0,-62.0122,-649.114	0/0:55:55,0:55:1949:0:0:0,-16.5566,-175.673	0/0:55:55,0:55:1945:0:0:0,-16.5566,-175.32	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.966	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.738	0/1:20:12,8:12:420:8:288:-20.2468,0,-32.1125	0/0:43:43,0:43:1521:0:0:0,-12.9443,-136.758	0/0:43:43,0:43:1494:0:0:0,-12.9443,-134.749	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:49:26,23:26:916:23:828:-60.0936,0,-68.006	0/1:28:9,19:9:320:19:684:-53.4615,0,-20.7092	0/0:162:162,0:162:5755:0:0:0,-48.7669,-518.032	0/0:68:68,0:68:2364:0:0:0,-20.47,-212.975
chr04	2883731	.	A	T	103913	PASS	AB=0.402778;ABP=251.282;AC=144;AF=0.765957;AN=188;AO=3915;CIGAR=1X;DP=5727;DPB=5727;DPRA=0;EPP=3.02417;EPPR=8.23623;GTI=4;LEN=1;MEANALT=1.02128;MQM=59.9351;MQMR=59.8906;NS=94;NUMALT=1;ODDS=0.353803;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=139708;QR=64797;RO=1810;RPL=1955;RPP=3.02417;RPPR=8.23623;RPR=1960;RUN=1;SAF=0;SAP=8504.32;SAR=3915;SRF=0;SRP=3933.38;SRR=1810;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:19,38:19:676:38:1348:-104.433,0,-44.0093	1/1:42:0,42:0:0:42:1492:-134.575,-12.6433,0	1/1:78:2,76:2:72:76:2716:-237.802,-16.6436,0	1/1:119:0,119:0:0:119:4247:-382.408,-35.8226,0	1/1:45:0,45:0:0:45:1608:-145.01,-13.5464,0	1/1:38:0,38:0:0:38:1356:-122.34,-11.4391,0	0/1:46:21,25:21:752:25:896:-67.113,0,-54.1589	1/1:84:0,84:0:0:84:2973:-267.804,-25.2865,0	0/1:73:36,37:36:1292:37:1328:-97.847,0,-94.6086	1/1:50:0,50:0:0:50:1776:-160.118,-15.0515,0	1/1:73:0,73:0:0:73:2620:-236.047,-21.9752,0	1/1:87:0,87:0:0:87:3103:-279.497,-26.1896,0	0/1:54:27,27:27:972:27:968:-71.1817,0,-71.5423	1/1:75:0,75:0:0:75:2677:-241.153,-22.5773,0	0/1:58:32,26:32:1152:26:932:-66.7391,0,-86.5304	0/1:43:27,16:27:937:16:568:-38.5076,0,-71.6966	1/1:33:0,32:0:0:32:1148:-103.269,-9.63296,0	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	0/1:27:15,12:15:540:12:432:-31.0934,0,-40.8087	0/1:88:56,32:56:2016:32:1140:-76.4186,0,-155.222	0/1:81:47,34:47:1684:34:1220:-85.7234,0,-127.453	0/1:85:67,18:67:2374:18:648:-33.0643,0,-188.325	0/1:51:29,22:29:1036:22:792:-56.2531,0,-78.2014	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:100:58,42:58:2080:42:1504:-105.552,0,-157.367	0/1:175:88,87:88:3156:87:3096:-226.189,0,-230.958	0/1:218:151,67:151:5432:67:2385:-149.281,0,-423.374	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:141:90,51:90:3228:51:1820:-121.632,0,-248.296	0/1:91:58,33:58:2072:33:1188:-79.8242,0,-159.357	1/1:60:0,60:0:0:60:2148:-193.587,-18.0618,0	0/1:18:6,12:6:212:12:421:-32.8049,0,-14.0063	0/1:15:6,9:6:216:9:324:-24.9904,0,-15.2572	1/1:10:0,10:0:0:10:360:-32.7419,-3.0103,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:32:20,12:20:720:12:424:-28.8635,0,-55.4958	1/1:164:0,164:0:0:164:5879:-529.219,-49.3689,0	1/1:61:0,61:0:0:61:2157:-194.393,-18.3628,0	1/1:41:0,41:0:0:41:1459:-131.605,-12.3422,0	0/1:6:2,4:2:68:4:136:-10.7694,0,-4.65153	0/1:66:44,22:44:1580:22:792:-51.7377,0,-122.624	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	0/1:116:78,38:78:2795:38:1360:-87.7564,0,-216.87	0/1:54:29,25:29:1036:25:896:-64.7047,0,-77.2983	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	0/1:81:35,46:35:1256:46:1637:-123.234,0,-88.9619	1/1:66:0,66:0:0:66:2348:-211.579,-19.868,0	0/1:120:80,40:80:2863:40:1428:-92.3762,0,-221.355	1/1:61:0,61:0:0:61:2155:-194.13,-18.3628,0	0/1:45:28,17:28:1000:17:608:-41.5057,0,-76.6827	1/1:92:0,92:0:0:92:3292:-296.499,-27.6948,0	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:72:45,27:45:1612:27:972:-66.1237,0,-123.684	0/1:56:38,18:38:1368:18:648:-41.7942,0,-106.56	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:81:0,81:0:0:81:2892:-260.516,-24.3834,0	1/1:25:0,25:0:0:25:860:-77.71,-7.52575,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	0/1:24:14,10:14:504:10:345:-24.1561,0,-38.4734	1/1:89:0,89:0:0:89:3173:-285.775,-26.7917,0	0/1:104:60,44:60:2147:44:1574:-110.644,0,-162.19	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:68:0,68:0:0:68:2420:-218.057,-20.47,0	0/1:91:56,35:56:2004:35:1252:-85.5913,0,-153.154	0/1:36:13,23:13:464:23:824:-63.6462,0,-31.2604	1/1:24:0,24:0:0:24:849:-76.7278,-7.22472,0	0/1:84:55,29:55:1967:29:1036:-68.2674,0,-151.86	0/1:140:102,38:102:3636:38:1355:-80.1032,0,-285.293	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:42:0,41:0:0:41:1453:-130.704,-12.3422,0	0/1:23:10,13:10:356:13:464:-35.1738,0,-25.4576	1/1:76:0,76:0:0:76:2700:-243.244,-22.8783,0	0/1:49:28,21:28:1000:21:748:-52.8939,0,-75.5649	1/1:109:1,108:1:36:108:3855:-343.548,-29.214,0	1/1:53:0,53:0:0:53:1881:-169.567,-15.9546,0	0/1:114:68,46:68:2435:46:1636:-113.211,0,-185.087	0/1:35:18,17:18:639:17:604:-44.1474,0,-47.3022	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:50:0,50:0:0:50:1792:-161.562,-15.0515,0	1/1:24:0,24:0:0:24:856:-77.3161,-7.22472,0	1/1:128:1,127:1:36:127:4505:-402.014,-34.9336,0	1/1:55:0,55:0:0:55:1964:-177.031,-16.5567,0	1/1:44:0,44:0:0:44:1583:-142.762,-13.2453,0	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	1/1:105:0,105:0:0:105:3760:-338.6,-31.6082,0	0/1:17:11,6:11:396:6:216:-14.673,0,-30.8652	1/1:46:0,46:0:0:46:1625:-146.537,-13.8474,0	1/1:40:0,40:0:0:40:1428:-128.818,-12.0412,0	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	0/1:144:81,63:81:2892:63:2264:-160.674,0,-217.15	0/1:65:43,22:43:1548:22:769:-49.9617,0,-120.046	1/1:57:0,57:0:0:57:2036:-183.512,-17.1587,0	1/1:66:0,66:0:0:66:2372:-213.738,-19.868,0
chr04	2883743	.	A	T	83618.3	PASS	AB=0.410382;ABP=216.684;AC=144;AF=0.765957;AN=188;AO=4036;CIGAR=1X;DP=5846;DPB=5846;DPRA=0;EPP=8767.07;EPPR=3931.2;GTI=3;LEN=1;MEANALT=1.01064;MQM=59.9115;MQMR=59.8966;NS=94;NUMALT=1;ODDS=0.230687;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=144554;QR=64782;RO=1809;RPL=4036;RPP=8767.07;RPPR=3931.2;RPR=0;RUN=1;SAF=0;SAP=8767.07;SAR=4036;SRF=0;SRP=3931.2;SRR=1809;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:19,39:19:684:39:1404:-109.171,0,-44.4306	1/1:48:0,48:0:0:48:1724:-155.445,-14.4494,0	1/1:81:1,80:1:36:80:2872:-255.069,-20.7852,0	1/1:122:0,122:0:0:122:4376:-394.002,-36.7257,0	1/1:44:0,44:0:0:44:1576:-142.132,-13.2453,0	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	0/1:46:21,25:21:752:25:896:-67.113,0,-54.1589	1/1:85:0,85:0:0:85:3037:-273.559,-25.5876,0	0/1:75:36,39:36:1296:39:1389:-102.73,0,-94.3667	1/1:52:0,52:0:0:52:1872:-168.757,-15.6536,0	1/1:76:0,76:0:0:76:2732:-246.122,-22.8783,0	1/1:88:0,88:0:0:88:3141:-282.915,-26.4906,0	0/1:55:28,27:28:1008:27:968:-70.8807,0,-74.4797	1/1:76:0,75:0:0:75:2685:-241.511,-22.5773,0	0/1:60:32,28:32:1152:28:989:-71.2602,0,-85.9283	0/1:43:27,16:27:960:16:576:-39.2307,0,-73.772	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:27:15,12:15:540:12:432:-31.0934,0,-40.8087	0/1:93:58,35:58:2076:35:1241:-83.9967,0,-159.115	0/1:88:50,38:50:1792:38:1358:-96.0263,0,-135.061	0/1:84:66,18:66:2368:18:648:-33.3654,0,-188.087	0/1:52:29,23:29:1044:23:824:-58.8298,0,-78.6212	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:101:57,44:57:2048:44:1576:-111.728,0,-154.188	0/1:179:90,89:90:3205:89:3200:-234.338,0,-234.161	0/1:217:148,69:148:5293:69:2480:-158.13,0,-411.177	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:142:91,51:91:3263:51:1828:-122.044,0,-251.143	0/1:92:58,34:58:2084:34:1224:-82.7616,0,-160.135	1/1:63:0,63:0:0:63:2260:-203.66,-18.9649,0	0/1:17:6,11:6:216:11:396:-30.8652,0,-14.673	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5582	1/1:10:0,10:0:0:10:360:-32.7419,-3.0103,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:31:19,12:19:684:12:424:-29.1645,0,-52.5584	1/1:165:0,165:0:0:165:5932:-533.985,-49.67,0	1/1:63:0,63:0:0:63:2264:-204.012,-18.9649,0	1/1:43:0,43:0:0:43:1544:-138.935,-12.9443,0	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:65:43,22:43:1529:22:792:-52.0387,0,-118.334	1/1:26:0,26:0:0:26:927:-83.7474,-7.82678,0	0/1:118:80,38:80:2867:38:1360:-87.1438,0,-222.745	0/1:54:29,25:29:1044:25:896:-64.7047,0,-78.0192	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	0/1:84:36,48:36:1296:48:1724:-130.159,0,-91.6574	1/1:71:0,71:0:0:71:2544:-229.211,-21.3731,0	0/1:126:80,46:80:2876:46:1626:-108.377,0,-220.719	1/1:64:0,64:0:0:64:2300:-207.175,-19.2659,0	0/1:44:27,17:27:968:17:608:-41.8067,0,-74.1057	1/1:92:0,92:0:0:92:3292:-296.499,-27.6948,0	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:76:47,29:47:1684:29:1040:-71.0361,0,-128.952	0/1:57:38,19:38:1334:19:684:-44.7316,0,-103.194	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:83:0,83:0:0:83:2982:-268.611,-24.9855,0	1/1:26:0,26:0:0:26:936:-84.5442,-7.82678,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:24:14,10:14:500:10:352:-24.7935,0,-38.1115	1/1:94:0,94:0:0:94:3350:-301.689,-28.2968,0	0/1:103:59,44:59:2120:44:1584:-111.845,0,-160.062	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:74:0,74:0:0:74:2660:-239.645,-22.2762,0	0/1:93:58,35:58:2080:35:1256:-85.3495,0,-159.388	0/1:35:12,23:12:432:23:824:-63.9473,0,-28.6851	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:84:54,30:54:1932:30:1061:-70.5128,0,-148.87	0/1:142:101,41:101:3579:41:1472:-90.0123,0,-279.56	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	1/1:29:0,29:0:0:29:1044:-94.2748,-8.72987,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	0/1:23:10,13:10:356:13:468:-35.536,0,-25.4576	1/1:78:0,78:0:0:78:2781:-250.53,-23.4803,0	0/1:49:27,22:27:963:22:777:-55.4975,0,-72.2355	1/1:116:1,115:1:36:115:4109:-366.202,-31.3212,0	1/1:54:0,54:0:0:54:1932:-174.146,-16.2556,0	0/1:116:67,49:67:2393:49:1730:-121.061,0,-180.706	0/1:36:18,18:18:648:18:639:-46.9961,0,-47.8148	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:51:0,51:0:0:51:1823:-164.351,-15.3525,0	1/1:25:0,25:0:0:25:900:-81.276,-7.52575,0	1/1:132:1,131:1:36:131:4643:-414.416,-36.1377,0	1/1:56:0,56:0:0:56:1997:-179.997,-16.8577,0	1/1:44:0,44:0:0:44:1580:-142.492,-13.2453,0	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	1/1:106:0,106:0:0:106:3806:-342.736,-31.9092,0	0/1:17:11,6:11:396:6:216:-14.673,0,-30.8652	1/1:47:0,47:0:0:47:1682:-151.667,-14.1484,0	1/1:40:0,40:0:0:40:1436:-129.538,-12.0412,0	1/1:48:0,48:0:0:48:1728:-155.788,-14.4494,0	0/1:144:80,64:80:2872:64:2300:-163.912,0,-215.353	0/1:65:43,22:43:1548:22:777:-50.6834,0,-120.046	1/1:61:0,61:0:0:61:2188:-197.186,-18.3628,0	1/1:67:0,67:0:0:67:2408:-216.976,-20.169,0
chr04	2883750	.	T	C	31142.5	PASS	AB=0.590984;ABP=219.942;AC=44;AF=0.234043;AN=188;AO=1787;CIGAR=1X;DP=5727;DPB=5727;DPRA=1.35353;EPP=3883.43;EPPR=8549.93;GTI=4;LEN=1;MEANALT=1.0625;MQM=59.8875;MQMR=59.9276;NS=94;NUMALT=1;ODDS=0.0178851;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63702;QR=140390;RO=3936;RPL=1787;RPP=3883.43;RPPR=8549.93;RPR=0;RUN=1;SAF=0;SAP=3883.43;SAR=1787;SRF=0;SRP=8549.93;SRR=3936;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:37,18:37:1290:18:636:-41.0114,0,-99.8402	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:78:77,1:77:2745:1:36:0,-19.8821,-243.688	0/0:121:121,0:121:4332:0:0:0,-36.4246,-390.045	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/1:45:23,21:23:824:21:741:-53.4076,0,-60.8782	0/0:80:80,0:80:2864:0:0:0,-24.0824,-257.997	0/1:76:39,37:39:1385:37:1328:-96.944,0,-102.069	0/0:50:50,0:50:1753:0:0:0,-15.0515,-158.052	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.122	0/0:88:88,0:88:3129:0:0:0,-26.4906,-281.835	0/1:54:27,27:27:968:27:968:-71.1817,0,-71.1817	0/0:73:73,0:73:2590:0:0:0,-21.9752,-233.332	0/1:58:27,31:27:972:31:1116:-83.292,0,-70.3382	0/1:41:16,25:16:576:25:883:-67.4452,0,-39.8328	0/0:32:32,0:32:1125:0:0:0,-9.63296,-101.555	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/1:26:12,14:12:432:14:504:-37.8713,0,-31.3944	0/1:91:34,57:34:1220:57:2025:-155.127,0,-82.7131	0/1:82:37,45:37:1304:45:1612:-120.675,0,-92.9708	0/1:82:18,64:18:648:64:2284:-181.137,0,-33.9674	0/1:52:23,29:23:816:29:1036:-77.9004,0,-58.1082	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:101:43,58:43:1548:58:2064:-155.627,0,-109.209	0/1:172:83,89:83:2960:89:3169:-233.03,0,-214.857	0/1:219:69,149:69:2453:149:5316:-412.586,0,-155.039	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:137:50,87:50:1773:87:3097:-237.716,0,-118.606	0/1:92:35,57:35:1233:57:2040:-156.177,0,-83.5667	0/0:61:61,0:61:2176:0:0:0,-18.3628,-196.104	0/1:17:11,6:11:396:6:207:-13.8494,0,-30.8652	0/1:15:9,6:9:324:6:216:-15.2572,0,-24.9904	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3789	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:33:13,20:13:456:20:716:-54.8337,0,-31.4392	0/0:161:161,0:161:5780:0:0:0,-48.4658,-520.312	0/0:61:61,0:61:2143:0:0:0,-18.3628,-193.133	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.659	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:64:22,42:22:773:42:1504:-116.389,0,-50.6236	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:116:36,80:36:1296:80:2842:-221.097,0,-81.9892	0/1:54:25,29:25:892:29:1036:-77.2983,0,-64.3441	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/1:85:49,36:49:1722:36:1296:-91.3564,0,-129.673	0/0:70:70,0:70:2493:0:0:0,-21.0721,-224.622	0/1:123:44,79:44:1553:79:2813:-215.954,0,-103.033	0/0:62:62,0:62:2205:0:0:0,-18.6639,-198.627	0/1:43:16,27:16:572:27:957:-73.4928,0,-38.8691	0/0:90:90,0:90:3213:0:0:0,-27.0927,-289.391	0/1:9:5,4:5:176:4:144:-10.6043,0,-13.4757	0/1:74:28,46:28:1008:46:1642:-125.775,0,-68.7601	0/1:56:19,37:19:684:37:1322:-102.419,0,-45.0326	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:80:80,0:80:2860:0:0:0,-24.0824,-257.638	0/0:24:24,0:24:852:0:0:0,-7.22472,-76.9851	0/0:15:14,1:14:496:1:36:0,-0.917175,-41.376	0/1:24:10,14:10:360:14:504:-38.4734,0,-25.5196	0/0:91:91,0:91:3199:0:0:0,-27.3937,-287.736	0/1:103:44,59:44:1580:59:2107:-158.892,0,-111.485	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/0:68:68,0:68:2425:0:0:0,-20.47,-218.504	0/1:94:35,59:35:1260:59:2070:-158.185,0,-85.4087	0/1:34:22,12:22:792:12:424:-28.2614,0,-61.3707	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/1:86:31,55:31:1097:55:1964:-150.989,0,-73.1494	0/1:141:38,103:38:1349:103:3661:-287.234,0,-79.263	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:41:41,0:41:1460:0:0:0,-12.3422,-131.696	0/1:23:13,10:13:468:10:345:-24.4571,0,-35.536	0/0:78:78,0:78:2796:0:0:0,-23.4803,-251.88	0/1:46:20,26:20:720:26:928:-69.9909,0,-51.279	0/0:111:110,1:110:3935:1:36:0,-29.8161,-350.735	0/0:54:54,0:54:1917:0:0:0,-16.2556,-172.801	0/1:113:44,69:44:1572:69:2484:-189.796,0,-107.755	0/1:34:18,16:18:640:16:572:-41.5784,0,-47.6766	0/1:6:1,5:1:36:5:176:-14.3788,0,-1.79209	0/0:49:49,0:49:1700:0:0:0,-14.7505,-153.278	0/0:26:26,0:26:917:0:0:0,-7.82678,-82.7996	0/0:132:131,1:131:4681:1:36:0,-36.1377,-417.834	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.397	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/1:14:6,6:6:216:6:212:-15.4543,0,-15.8183	0/0:103:103,0:103:3684:0:0:0,-31.0061,-331.763	0/1:17:6,11:6:212:11:396:-30.8652,0,-14.3073	0/0:46:46,0:46:1643:0:0:0,-13.8474,-148.158	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.078	0/1:143:64,79:64:2296:79:2810:-210.09,0,-163.854	0/1:62:24,38:24:864:38:1355:-103.586,0,-59.4187	0/0:57:57,0:57:2036:0:0:0,-17.1587,-183.512	0/0:66:66,0:66:2361:0:0:0,-19.868,-212.747
chr04	2883759	.	C	T	32140.3	PASS	AB=0.595044;ABP=243.656;AC=44;AF=0.234043;AN=188;AO=1829;CIGAR=1X;DP=5767;DPB=5767;DPRA=1.4882;EPP=3974.63;EPPR=8554.27;GTI=4;LEN=1;MEANALT=1;MQM=59.9016;MQMR=59.9271;NS=94;NUMALT=1;ODDS=0.126912;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65445;QR=140263;RO=3938;RPL=1829;RPP=3974.63;RPPR=8554.27;RPR=0;RUN=1;SAF=0;SAP=3974.63;SAR=1829;SRF=0;SRP=8554.27;SRR=3938;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:38,19:38:1360:19:680:-44.3705,0,-105.542	0/0:44:44,0:44:1554:0:0:0,-13.2453,-140.148	0/0:77:76,1:76:2716:1:36:0,-19.581,-241.067	0/0:120:119,1:119:4245:1:36:0,-32.5253,-378.62	0/0:44:44,0:44:1557:0:0:0,-13.2453,-140.42	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.701	0/1:46:25,21:25:888:21:756:-54.5198,0,-66.3916	0/0:82:82,0:82:2917:0:0:0,-24.6845,-262.764	0/1:76:39,37:39:1385:37:1320:-96.2231,0,-102.069	0/0:50:50,0:50:1785:0:0:0,-15.0515,-160.931	0/0:72:72,0:72:2554:0:0:0,-21.6742,-230.108	0/0:84:84,0:84:2993:0:0:0,-25.2865,-269.601	0/1:56:28,28:28:1000:28:1004:-73.8182,0,-73.4577	0/0:70:70,0:70:2499:0:0:0,-21.0721,-225.162	0/1:60:28,32:28:1004:32:1148:-85.568,0,-72.6141	0/1:43:16,27:16:572:27:968:-74.4931,0,-38.8691	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:27:12,15:12:432:15:540:-40.8087,0,-31.0934	0/1:92:34,58:34:1212:58:2069:-158.784,0,-81.6916	0/1:86:36,50:36:1280:50:1777:-134.311,0,-89.6133	0/1:85:18,67:18:648:67:2385:-189.317,0,-33.0643	0/1:53:23,30:23:820:30:1050:-78.8517,0,-58.1679	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:100:43,57:43:1536:57:2048:-154.489,0,-108.43	0/1:174:87,87:87:3086:87:3128:-228.995,0,-225.587	0/1:219:66,153:66:2341:153:5504:-429.549,0,-145.023	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:140:49,91:49:1744:91:3249:-250.486,0,-115.096	0/1:93:34,59:34:1197:59:2097:-161.002,0,-80.027	0/0:62:62,0:62:2171:0:0:0,-18.6639,-195.651	0/1:18:12,6:12:432:6:216:-14.372,0,-33.8027	0/1:15:9,6:9:324:6:212:-14.8915,0,-24.9904	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5035	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:33:13,20:13:460:20:720:-55.1948,0,-31.8014	0/0:165:165,0:165:5909:0:0:0,-49.6699,-531.917	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.696	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.337	0/1:6:4,2:4:144:2:68:-4.65153,0,-11.5074	0/1:66:22,44:22:784:44:1584:-122.984,0,-51.0159	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:118:38,80:38:1364:80:2868:-222.835,0,-87.5216	0/1:53:24,29:24:860:29:1040:-77.9598,0,-61.7672	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/1:85:49,36:49:1741:36:1280:-89.9157,0,-131.385	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.972	0/1:123:44,79:44:1580:79:2840:-218.811,0,-105.465	0/0:62:62,0:62:2209:0:0:0,-18.6639,-198.987	0/1:45:17,28:17:612:28:996:-76.3718,0,-41.8671	0/0:89:89,0:89:3184:0:0:0,-26.7917,-286.784	0/1:9:5,4:5:176:4:144:-10.6043,0,-13.4757	0/1:76:29,47:29:1040:47:1682:-128.773,0,-71.0361	0/1:58:19,39:19:657:39:1404:-109.188,0,-41.9907	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:82:82,0:82:2925:0:0:0,-24.6845,-263.484	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.3057	0/0:14:14,0:14:485:0:0:0,-4.21442,-43.977	0/1:24:10,14:10:360:14:504:-38.4734,0,-25.5196	0/0:88:88,0:88:3050:0:0:0,-26.4906,-274.517	0/1:104:44,60:44:1568:60:2139:-161.469,0,-110.105	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:71:71,0:71:2518:0:0:0,-21.3731,-226.869	0/1:92:33,59:33:1180:59:2120:-163.288,0,-78.8133	0/1:36:23,13:23:828:13:464:-31.2604,0,-64.007	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:86:30,56:30:1038:56:2008:-154.947,0,-67.8365	0/1:143:39,104:39:1355:104:3694:-289.6,0,-79.1943	0/0:25:25,0:25:885:0:0:0,-7.52575,-79.9665	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:42:42,0:42:1496:0:0:0,-12.6433,-134.935	0/1:23:13,10:13:464:10:360:-25.8206,0,-35.1738	0/0:73:73,0:73:2600:0:0:0,-21.9752,-234.249	0/1:49:21,28:21:756:28:1000:-75.5649,0,-53.6144	0/0:112:111,1:111:3915:1:36:0,-30.1171,-348.747	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.225	0/1:117:49,68:49:1740:68:2435:-184.185,0,-121.664	0/1:36:18,18:18:644:18:644:-47.4535,0,-47.4359	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.203	0/0:26:26,0:26:902:0:0:0,-7.82678,-81.4888	0/0:132:131,1:131:4669:1:36:0,-36.1377,-416.766	0/0:55:55,0:55:1957:0:0:0,-16.5566,-176.399	0/0:43:43,0:43:1525:0:0:0,-12.9443,-137.541	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	0/0:99:99,0:99:3537:0:0:0,-29.802,-318.538	0/1:17:6,11:6:216:11:396:-30.8652,0,-14.673	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.068	0/1:142:63,79:63:2233:79:2820:-211.286,0,-158.486	0/1:66:23,43:23:828:43:1544:-119.385,0,-54.9761	0/0:59:59,0:59:2097:0:0:0,-17.7608,-188.998	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.616
chr04	2901392	.	G	A	237417	PASS	AB=0.51825;ABP=18.5446;AC=144;AF=0.765957;AN=188;AO=8742;CIGAR=1X;DP=11351;DPB=11351;DPRA=0;EPP=163.577;EPPR=10.0684;GTI=0;LEN=1;MEANALT=1.05319;MQM=59.7561;MQMR=59.9704;NS=94;NUMALT=1;ODDS=8.8946;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=312651;QR=93097;RO=2604;RPL=3969;RPP=163.577;RPPR=10.0684;RPR=4773;RUN=1;SAF=0;SAP=18986;SAR=8742;SRF=0;SRP=5657.52;SRR=2604;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:13,25:13:468:25:900:-69.8726,0,-31.0205	1/1:174:1,173:1:36:173:6178:-552.441,-48.7809,0	1/1:188:0,188:0:0:188:6697:-602.646,-56.5936,0	1/1:182:1,181:1:36:181:6494:-580.944,-51.1892,0	1/1:60:1,59:1:36:59:2094:-185.105,-14.4635,0	1/1:63:0,63:0:0:63:2221:-199.973,-18.9649,0	0/1:196:90,106:90:3205:106:3785:-281.796,0,-229.67	1/1:180:3,177:3:108:177:6337:-560.182,-44.1102,0	0/1:80:32,48:32:1144:48:1697:-128.915,0,-79.1871	1/1:139:0,139:0:0:139:4945:-445.14,-41.8432,0	1/1:222:1,221:1:36:221:7924:-709.522,-63.2304,0	1/1:99:0,99:0:0:99:3547:-319.41,-29.802,0	0/1:96:52,44:52:1860:44:1580:-113.583,0,-138.781	1/1:142:0,142:0:0:142:5066:-456.076,-42.7463,0	0/1:83:43,39:43:1517:39:1396:-100.895,0,-111.777	0/1:61:24,37:24:860:37:1328:-101.459,0,-59.359	1/1:103:0,103:0:0:103:3674:-330.751,-31.0061,0	1/1:78:1,77:1:36:77:2772:-246.113,-19.8821,0	0/1:90:39,51:39:1400:51:1832:-138.066,0,-99.2065	0/1:220:106,114:106:3808:114:4081:-301.225,0,-276.676	0/1:122:49,73:49:1756:73:2592:-196.802,0,-121.598	0/1:71:38,33:38:1368:33:1184:-85.4952,0,-102.048	0/1:71:36,35:36:1287:35:1256:-91.9706,0,-94.7597	1/1:113:6,107:6:216:107:3840:-325.991,-14.2259,0	0/1:95:40,55:40:1424:55:1972:-149.157,0,-99.8596	0/1:350:147,203:147:5263:203:7269:-548.894,0,-368.445	0/1:229:113,116:113:4060:116:4168:-306.36,0,-296.65	1/1:53:0,53:0:0:53:1900:-171.148,-15.9546,0	0/1:340:174,166:174:6231:166:5960:-433.953,0,-458.535	0/1:168:78,90:78:2795:90:3209:-238.298,0,-201.216	1/1:158:0,158:0:0:158:5598:-503.91,-47.5627,0	0/1:13:9,4:9:320:4:140:-9.03119,0,-25.229	0/1:21:14,7:14:500:7:237:-15.3367,0,-39.0145	1/1:5:0,5:0:0:5:180:-16.5437,-1.50515,0	1/1:28:0,28:0:0:28:1008:-91.019,-8.42884,0	0/1:22:12,10:12:432:10:360:-26.1216,0,-32.5985	1/1:237:0,237:0:0:237:8482:-763.377,-71.3441,0	1/1:191:0,191:0:0:191:6825:-614.293,-57.4967,0	1/1:128:0,128:0:0:128:4588:-412.986,-38.5318,0	0/1:18:6,12:6:216:12:432:-33.8027,0,-14.372	0/1:160:71,89:71:2509:89:3185:-238.703,0,-177.897	1/1:73:0,73:0:0:73:2607:-234.819,-21.9752,0	0/1:89:40,49:40:1436:49:1754:-131.344,0,-102.746	0/1:126:60,66:60:2156:66:2357:-174.443,0,-156.377	1/1:76:1,75:1:32:75:2685:-238.679,-19.679,0	0/1:61:28,33:28:999:33:1176:-87.6272,0,-71.8617	1/1:133:0,133:0:0:133:4752:-427.803,-40.037,0	0/1:253:128,125:128:4557:125:4487:-327.823,0,-334.136	1/1:163:0,163:0:0:163:5834:-524.789,-49.0679,0	0/1:204:83,121:83:2937:121:4307:-326.343,0,-203.152	1/1:78:0,77:0:0:77:2739:-246.387,-23.1793,0	0/1:18:9,9:9:324:9:324:-24.0873,0,-24.0873	0/1:307:149,158:149:5318:158:5641:-415.108,0,-386.147	0/1:67:31,36:31:1116:36:1296:-96.7749,0,-80.5827	1/1:29:0,29:0:0:29:1035:-93.4538,-8.72987,0	1/1:145:0,145:0:0:145:5179:-466.239,-43.6494,0	1/1:66:0,66:0:0:66:2357:-212.382,-19.868,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/1:30:9,21:9:320:21:741:-57.9807,0,-20.1115	1/1:91:0,91:0:0:91:3252:-292.899,-27.3937,0	0/1:159:69,90:69:2471:90:3217:-241.874,0,-174.779	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:124:0,124:0:0:124:4419:-397.722,-37.3277,0	0/1:186:118,67:118:4200:67:2367:-157.234,0,-322.131	0/1:122:47,75:47:1680:75:2687:-205.307,0,-114.761	1/1:103:0,103:0:0:103:3681:-331.463,-31.0061,0	0/1:133:62,71:62:2224:71:2556:-190.246,0,-160.387	0/1:70:51,19:51:1832:19:676:-40.0959,0,-143.717	1/1:104:0,104:0:0:104:3732:-335.691,-31.3071,0	1/1:95:0,95:0:0:95:3405:-306.643,-28.5979,0	1/1:136:0,136:0:0:136:4856:-437.031,-40.9401,0	0/1:31:13,18:13:468:18:644:-48.9505,0,-33.1277	1/1:148:0,147:0:0:147:5237:-470.893,-44.2514,0	0/1:83:44,39:44:1576:39:1389:-100.309,0,-117.146	1/1:230:0,229:0:0:229:8196:-737.403,-68.9359,0	1/1:201:0,201:0:0:201:7195:-647.602,-60.507,0	0/1:206:116,90:116:4127:90:3228:-228.671,0,-309.601	0/1:176:85,91:85:3038:91:3272:-241.584,0,-220.668	0/1:22:10,12:10:356:12:428:-32.2361,0,-25.7586	1/1:178:2,176:2:72:176:6300:-560.25,-46.7466,0	1/1:154:0,154:0:0:154:5504:-495.335,-46.3586,0	1/1:173:0,173:0:0:173:6182:-556.35,-52.0782,0	1/1:132:0,132:0:0:132:4752:-427.835,-39.736,0	1/1:81:0,81:0:0:81:2901:-261.325,-24.3834,0	0/1:79:44,35:44:1576:35:1260:-89.8955,0,-118.35	1/1:178:1,177:1:36:177:6323:-565.499,-49.9851,0	0/1:69:32,37:32:1152:37:1332:-99.4021,0,-83.2191	1/1:95:0,95:0:0:95:3412:-307.254,-28.5979,0	1/1:114:0,114:0:0:114:4096:-368.788,-34.3174,0	1/1:124:0,124:0:0:124:4451:-400.736,-37.3277,0	0/1:250:117,133:117:4199:133:4762:-353.458,0,-302.832	0/1:85:54,31:54:1936:31:1116:-75.1641,0,-148.929	1/1:45:0,45:0:0:45:1601:-144.378,-13.5464,0	1/1:139:1,138:1:32:138:4938:-441.355,-38.6439,0
chr04	2986954	.	T	C	73429.4	PASS	AB=0.491252;ABP=8.89918;AC=45;AF=0.239362;AN=188;AO=4360;CIGAR=1X;DP=17757;DPB=17757;DPRA=1.18832;EPP=9470.63;EPPR=29079;GTI=1;LEN=1;MEANALT=1.1;MQM=59.7791;MQMR=59.9723;NS=94;NUMALT=1;ODDS=8.70916;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=155788;QR=479907;RO=13390;RPL=4360;RPP=9470.63;RPPR=29079;RPR=0;RUN=1;SAF=0;SAP=9470.63;SAR=4360;SRF=0;SRP=29079;SRR=13390;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	0/0:157:157,0:157:5636:0:0:0,-47.2617,-507.358	0/0:119:119,0:119:4249:0:0:0,-35.8226,-382.588	0/0:121:121,0:121:4352:0:0:0,-36.4246,-391.853	0/0:51:51,0:51:1836:0:0:0,-15.3525,-165.521	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:94:57,37:57:2048:37:1324:-91.1604,0,-156.295	0/0:194:193,1:193:6924:1:36:0,-54.8264,-619.651	0/1:45:28,17:28:1008:17:612:-41.8662,0,-77.49	0/0:123:123,0:123:4404:0:0:0,-37.0267,-396.53	0/0:416:416,0:416:14952:0:0:0,-125.228,-1345.18	0/0:74:74,0:74:2625:0:0:0,-22.2762,-236.497	0/1:69:30,39:30:1076:39:1400:-105.525,0,-76.3818	0/0:62:61,1:61:2192:1:36:0,-15.0656,-193.947	0/1:57:25,31:25:896:31:1103:-82.3624,0,-63.7429	0/1:66:34,32:34:1216:32:1148:-83.7619,0,-89.8786	0/0:67:67,0:67:2389:0:0:0,-20.169,-215.237	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/1:204:116,88:116:4172:88:3152:-222.475,0,-314.25	0/1:108:47,61:47:1662:61:2188:-164.672,0,-117.352	0/1:114:61,53:61:2177:53:1908:-137.607,0,-161.877	0/1:119:35,83:35:1260:83:2968:-231.468,0,-77.8241	0/1:60:30,30:30:1065:30:1076:-79.0687,0,-78.098	0/1:97:88,9:88:3152:9:324:-0.304388,0,-254.705	0/1:87:50,37:50:1773:37:1328:-93.6326,0,-133.662	0/1:219:103,116:103:3696:116:4152:-307.912,0,-266.916	0/1:210:104,106:104:3732:106:3796:-278.619,0,-272.864	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:242:116,126:116:4172:126:4509:-332.997,0,-302.811	0/1:172:93,79:93:3340:79:2815:-201.805,0,-249.039	0/0:81:81,0:81:2904:0:0:0,-24.3834,-261.593	0/1:992:507,485:507:18177:485:17358:-1263.19,0,-1336.89	0/1:515:298,217:298:10649:217:7696:-537.627,0,-802.841	0/0:980:980,0:980:35137:0:0:0,-295.009,-3161.16	0/0:970:968,2:968:34737:2:72:0,-285.163,-3118.32	0/1:534:286,248:286:10225:248:8880:-638.101,0,-759.428	0/0:156:156,0:156:5572:0:0:0,-46.9607,-501.594	0/0:193:193,0:193:6898:0:0:0,-58.0988,-620.878	0/0:393:393,0:393:14104:0:0:0,-118.305,-1269.06	0/1:310:165,145:165:5916:145:5161:-371.129,0,-439.227	0/1:77:34,43:34:1216:43:1536:-115.347,0,-86.5673	0/0:199:199,0:199:7148:0:0:0,-59.905,-643.374	0/1:92:45,47:45:1616:47:1684:-124.148,0,-118.035	0/1:73:40,33:40:1428:33:1179:-84.4397,0,-106.842	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.663	0/1:59:29,30:29:1036:30:1076:-79.3921,0,-75.7927	0/0:115:115,0:115:4124:0:0:0,-34.6184,-371.344	0/1:160:76,84:76:2732:84:2985:-220.694,0,-197.957	0/0:109:109,0:109:3900:0:0:0,-32.8123,-351.194	0/1:142:81,61:81:2908:61:2188:-154.435,0,-219.209	0/0:126:126,0:126:4483:0:0:0,-37.9298,-403.635	0/1:611:302,309:302:10837:309:11052:-810.153,0,-791.295	0/1:137:77,59:77:2764:59:2124:-150.145,0,-207.741	0/1:30:9,21:9:324:21:740:-57.8353,0,-20.475	0/0:751:751,0:751:26948:0:0:0,-226.074,-2424.43	0/0:78:78,0:78:2800:0:0:0,-23.4803,-251.463	0/0:33:32,1:32:1137:1:36:0,-6.33571,-99.0387	0/0:677:677,0:677:24218:0:0:0,-203.797,-2178.95	0/1:639:336,303:336:12026:303:10815:-780.689,0,-889.818	0/0:46:46,0:46:1640:0:0:0,-13.8474,-147.889	0/1:87:44,43:44:1584:43:1531:-111.888,0,-116.662	0/0:329:329,0:329:11759:0:0:0,-99.0389,-1058.17	0/0:66:66,0:66:2357:0:0:0,-19.868,-212.382	0/1:176:100,76:100:3580:76:2720:-192.016,0,-269.426	0/1:51:31,20:31:1116:20:716:-49.4152,0,-85.3992	0/0:54:54,0:54:1932:0:0:0,-16.2556,-174.157	0/1:133:68,65:68:2444:65:2314:-168.475,0,-180.178	0/1:88:32,56:32:1144:56:2012:-154.845,0,-76.7789	0/0:273:273,0:273:9761:0:0:0,-82.1812,-878.436	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/0:84:81,3:81:2904:3:108:0,-15.2113,-251.497	0/1:434:191,243:191:6852:243:8641:-647.02,0,-486.101	0/0:97:97,0:97:3465:0:0:0,-29.1999,-312.061	0/1:16:5,11:5:180:11:396:-31.1663,0,-11.7356	0/0:157:156,0:156:5593:0:0:0,-46.9607,-503.13	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/1:91:42,49:42:1504:49:1747:-130.116,0,-108.261	0/1:124:52,72:52:1859:72:2580:-195.118,0,-130.261	0/1:429:211,217:211:7561:217:7719:-565.52,0,-551.326	0/0:102:101,0:101:3632:0:0:0,-30.404,-326.662	0/0:92:92,0:92:3304:0:0:0,-27.6948,-297.578	0/0:97:97,0:97:3476:0:0:0,-29.1999,-313.051	0/0:83:83,0:83:2984:0:0:0,-24.9855,-268.791	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/1:78:34,44:34:1220:44:1576:-118.644,0,-86.6265	0/0:163:163,0:163:5852:0:0:0,-49.0679,-526.79	0/1:37:21,16:21:756:16:568:-40.3119,0,-57.2291	0/0:83:83,0:83:2965:0:0:0,-24.9855,-267.082	0/0:79:79,0:79:2832:0:0:0,-23.7814,-255.118	0/0:358:358,0:358:12851:0:0:0,-107.769,-1156.4	0/1:707:343,363:343:12317:363:12992:-956.093,0,-895.468	0/1:66:25,41:25:900:41:1459:-111.735,0,-61.453	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:64:64,0:64:2291:0:0:0,-19.2659,-206.451
chr04	3081283	.	C	T	24288.6	PASS	AB=0.452482;ABP=67.8101;AC=45;AF=0.239362;AN=188;AO=1496;CIGAR=1X;DP=7032;DPB=7032;DPRA=0.954817;EPP=3225.53;EPPR=11864;GTI=3;LEN=1;MEANALT=1.04348;MQM=59.5561;MQMR=59.3156;NS=94;NUMALT=1;ODDS=4.91026;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53419;QR=197750;RO=5530;RPL=1493;RPP=3225.53;RPPR=11864;RPR=3;RUN=1;SAF=0;SAP=3251.53;SAR=1496;SRF=0;SRP=12011.3;SRR=5530;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:13,11:13:464:11:396:-28.758,0,-34.7851	0/0:121:121,0:121:4340:0:0:0,-36.4246,-389.76	0/0:65:65,0:65:2324:0:0:0,-19.5669,-209.391	0/0:106:105,0:105:3759:0:0:0,-31.6081,-337.992	0/0:57:57,0:57:2031:0:0:0,-17.1587,-183.042	0/0:18:18,0:18:625:0:0:0,-5.41854,-56.3735	0/1:77:51,26:51:1824:26:932:-61.0196,0,-141.226	0/0:172:172,0:172:6147:0:0:0,-51.7772,-552.901	0/1:53:35,18:35:1256:18:636:-41.6053,0,-97.371	0/0:56:55,1:55:1968:1:36:0,-13.2594,-173.431	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.664	0/0:64:64,0:64:2279:0:0:0,-19.2659,-205.346	0/1:67:29,38:29:1032:38:1360:-102.532,0,-72.9999	0/0:66:66,0:66:2368:0:0:0,-19.868,-212.294	0/1:54:33,21:33:1175:21:756:-52.1112,0,-89.773	0/1:57:25,32:25:896:32:1140:-85.7459,0,-63.7924	0/0:60:60,0:60:2139:0:0:0,-18.0618,-192.777	0/0:41:40,0:40:1428:0:0:0,-12.0412,-128.488	0/1:43:20,23:20:720:23:820:-61.174,0,-52.1763	0/1:131:63,68:63:2247:68:2424:-178.917,0,-162.946	0/1:89:52,37:52:1860:37:1332:-93.3825,0,-140.74	0/1:79:36,43:36:1296:43:1536:-114.637,0,-93.1575	0/1:56:39,17:39:1400:17:608:-38.1943,0,-109.411	0/1:74:67,7:67:2396:7:248:-0.387975,0,-192.835	0/1:53:40,13:40:1428:13:460:-25.7808,0,-112.708	0/1:193:98,95:98:3516:95:3408:-248.804,0,-258.512	0/1:178:97,81:97:3475:81:2912:-208.601,0,-258.998	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8757	0/1:219:138,81:138:4951:81:2884:-193.87,0,-379.216	0/1:88:47,41:47:1672:41:1454:-104.654,0,-124.263	0/0:114:114,0:114:4067:0:0:0,-34.3174,-365.956	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6161	0/1:27:15,12:15:540:12:428:-30.7264,0,-40.7636	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3052	0/1:15:10,5:10:360:5:180:-12.0366,0,-28.2289	0/0:149:149,0:149:5322:0:0:0,-44.8535,-479.1	0/0:177:177,0:177:6335:0:0:0,-53.2823,-570.04	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.932	0/1:8:7,1:7:248:1:36:-1.19004,0,-20.2541	0/1:96:34,62:34:1216:62:2212:-170.434,0,-80.4714	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.767	0/1:161:98,63:98:3504:63:2245:-153.802,0,-267.057	0/1:44:22,22:22:792:22:788:-57.9513,0,-58.301	0/0:53:53,0:53:1895:0:0:0,-15.9546,-170.685	0/1:62:39,22:39:1392:22:790:-52.6631,0,-106.855	0/0:68:68,0:68:2432:0:0:0,-20.47,-219.103	0/1:161:89,72:89:3192:72:2572:-183.179,0,-238.867	0/0:41:41,0:41:1453:0:0:0,-12.3422,-130.86	0/1:104:51,52:51:1815:52:1860:-136.315,0,-132.238	0/0:126:126,0:126:4513:0:0:0,-37.9298,-406.233	0/1:10:3,7:3:108:7:252:-20.0104,0,-7.06487	0/1:79:47,32:47:1676:32:1140:-79.1033,0,-127.291	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.2922	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:115:115,0:115:4105:0:0:0,-34.6184,-369.543	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5434	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	0/0:77:77,0:77:2753:0:0:0,-23.1793,-247.95	0/1:103:54,49:54:1924:49:1752:-126.916,0,-142.409	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.4781	0/0:163:163,0:163:5822:0:0:0,-49.0679,-524.044	0/1:140:68,72:68:2427:72:2559:-188.36,0,-176.346	0/1:58:29,29:29:1044:29:1032:-75.602,0,-76.8105	0/0:65:65,0:65:2320:0:0:0,-19.5669,-208.997	0/1:102:47,55:47:1684:55:1953:-145.309,0,-120.508	0/1:75:28,47:28:1004:47:1680:-128.817,0,-68.0986	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.026	0/0:49:49,0:49:1752:0:0:0,-14.7505,-157.853	0/0:82:82,0:82:2936:0:0:0,-24.6845,-264.412	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	0/0:103:103,0:103:3679:0:0:0,-31.0061,-331.23	0/1:36:21,15:21:756:15:540:-38.0995,0,-57.5138	0/0:149:149,0:149:5300:0:0:0,-44.8535,-476.072	0/0:122:122,0:122:4361:0:0:0,-36.7257,-392.184	0/1:77:43,34:43:1536:34:1216:-86.5673,0,-114.831	0/1:93:57,36:57:2044:36:1292:-88.5856,0,-156.228	0/1:16:11,5:11:396:5:161:-9.99008,0,-31.1647	0/0:91:91,0:91:3249:0:0:0,-27.3937,-292.471	0/0:77:77,0:77:2756:0:0:0,-23.1793,-248.257	0/0:216:216,0:216:7754:0:0:0,-65.0225,-696.589	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.685	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.167	0/1:71:42,29:42:1495:29:1040:-72.5412,0,-113.365	0/0:130:130,0:130:4643:0:0:0,-39.1339,-417.666	0/1:31:17,14:17:612:14:500:-35.9813,0,-46.0815	0/0:51:49,0:49:1748:0:0:0,-14.7505,-157.325	0/0:42:42,0:42:1489:0:0:0,-12.6433,-134.299	0/0:51:51,0:51:1819:0:0:0,-15.3525,-163.971	0/1:85:45,40:45:1616:40:1436:-103.95,0,-120.133	0/1:65:18,47:18:633:47:1657:-129.817,0,-37.7005	0/0:95:95,0:95:3393:0:0:0,-28.5978,-305.478	0/0:79:79,0:79:2820:0:0:0,-23.7814,-253.962
chr04	3081289	.	CGGCC	TGGCG,TGGCC	138687	PASS	AB=0.585771,0.403258;ABP=195.22,247.535;AC=145,43;AF=0.771277,0.228723;AN=188;AO=5625,1218;CIGAR=1X3M1X,1X4M;DP=6919;DPB=6918.6;DPRA=0,0.903712;EPP=12217.5,2647.86;EPPR=0;GTI=3;LEN=5,1;MEANALT=2.2234,2.71111;MQM=59.3275,59.697;MQMR=0;NS=94;NUMALT=2;ODDS=1.78077;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=191827,41895;QR=0;RO=0;RPL=5625,1218;RPP=12217.5,2647.86;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=12217.5,2647.86;SAR=5625,1218;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:20:0,13,7:0:0:13,7:430,229:-53.5745,-18.8223,-14.9089,-35.0804,0,-32.9732	1/1:125:0,124,0:0:0:124,0:4233,0:-380.523,-37.3277,0,-380.523,-37.3277,-380.523	1/1:69:0,68,0:0:0:68,0:2276,0:-204.757,-20.47,0,-204.757,-20.47,-204.757	1/1:107:0,105,0:0:0:105,0:3593,0:-322.957,-31.6082,0,-322.957,-31.6082,-322.957	1/1:57:0,56,0:0:0:56,0:1905,0:-171.454,-16.8577,0,-171.454,-16.8577,-171.454	1/1:19:0,17,0:0:0:17,0:595,0:-53.5506,-5.11751,0,-53.5506,-5.11751,-53.5506	1/2:75:0,53,22:0:0:53,22:1801,753:-207.511,-61.4624,-45.5078,-146.39,0,-139.767	1/1:179:0,173,0:0:0:173,0:5902,0:-530.63,-52.0782,0,-530.63,-52.0782,-530.63	1/2:54:0,39,15:0:0:39,15:1333,532:-151.852,-43.6894,-31.9493,-108.514,0,-103.998	1/1:57:0,55,1:0:0:55,1:1863,36:-167.501,-16.5567,0,-164.564,-13.569,-164.263	1/1:72:0,71,0:0:0:71,0:2391,0:-215.135,-21.3731,0,-215.135,-21.3731,-215.135	1/1:65:0,63,0:0:0:63,0:2175,0:-195.742,-18.9649,0,-195.742,-18.9649,-195.742	1/2:60:0,28,31:0:0:28,31:967,1100:-168.304,-89.7542,-81.3253,-78.6732,0,-69.3413	1/1:67:0,65,0:0:0:65,0:2231,0:-200.461,-19.567,0,-200.461,-19.567,-200.461	1/2:51:0,32,17:0:0:32,17:1076,588:-134.939,-47.7791,-38.1462,-87.1542,0,-82.0366	1/2:48:0,25,23:0:0:25,23:870,808:-136.851,-66.1164,-58.5907,-71.0844,0,-64.1607	1/1:61:0,61,0:0:0:61,0:2085,0:-187.92,-18.3628,0,-187.92,-18.3628,-187.92	1/1:41:0,40,0:0:0:40,0:1384,0:-124.486,-12.0412,0,-124.486,-12.0412,-124.486	1/2:34:0,21,13:0:0:21,13:707,452:-94.372,-37.0968,-30.7752,-57.6185,0,-53.7051	1/2:120:0,60,59:0:0:60,59:2070,2037:-333.506,-165.489,-147.428,-168.051,0,-150.29	1/2:83:0,53,28:0:0:53,28:1784,943:-220.919,-76.4134,-60.4588,-144.512,0,-136.083	1/2:73:0,37,36:0:0:37,36:1239,1203:-198.057,-97.7255,-86.5874,-100.666,0,-89.8286	1/2:53:0,39,14:0:0:39,14:1366,473:-149.813,-38.6768,-26.9366,-111.477,0,-107.263	1/1:73:0,69,4:0:0:69,4:2374,136:-213.084,-20.7711,0,-202.053,-9.39965,-200.849	1/2:53:0,40,12:0:0:40,12:1365,416:-144.526,-33.7769,-21.7357,-110.818,0,-107.205	1/2:180:0,96,81:0:0:96,81:3271,2757:-489.027,-223.677,-194.778,-265.386,0,-241.002	1/2:170:0,100,67:0:0:100,67:3393,2325:-464.047,-188.993,-158.89,-275.058,0,-254.889	1/1:22:0,22,0:0:0:22,0:753,0:-68.078,-6.62266,0,-68.078,-6.62266,-68.078	1/2:214:0,145,67:0:0:145,67:4909,2238:-578.821,-181.178,-137.529,-397.648,0,-377.479	1/2:80:0,46,33:0:0:46,33:1562,1145:-219.792,-93.1216,-79.2742,-126.722,0,-116.788	1/1:118:0,117,0:0:0:117,0:4000,0:-359.786,-35.2205,0,-359.786,-35.2205,-359.786	1/2:8:0,7,1:0:0:7,1:245,36:-23.2178,-3.29724,-1.19003,-20.2791,0,-19.9781	1/2:25:0,15,10:0:0:15,10:520,341:-70.2432,-28.0028,-23.4874,-42.5834,0,-39.5731	1/1:4:0,4,0:0:0:4,0:143,0:-13.2214,-1.20412,0,-13.2214,-1.20412,-13.2214	1/1:4:0,4,0:0:0:4,0:137,0:-12.661,-1.20412,0,-12.661,-1.20412,-12.661	1/2:15:0,10,5:0:0:10,5:346,168:-42.07,-13.9458,-10.9355,-28.4634,0,-26.9583	1/1:153:0,153,0:0:0:153,0:5165,0:-465.016,-46.0576,0,-465.016,-46.0576,-465.016	1/1:180:0,179,0:0:0:179,0:6124,0:-550.829,-53.8844,0,-550.829,-53.8844,-550.829	1/1:69:0,69,0:0:0:69,0:2376,0:-214.07,-20.7711,0,-214.07,-20.7711,-214.07	1/1:7:0,7,0:0:0:7,0:245,0:-22.3893,-2.10721,0,-22.3893,-2.10721,-22.3893	1/2:91:0,36,55:0:0:36,55:1242,1906:-256.009,-155.245,-144.408,-101.109,0,-84.5526	1/1:42:0,41,0:0:0:41,0:1344,0:-120.994,-12.3422,0,-120.994,-12.3422,-120.994	1/2:153:0,101,51:0:0:101,51:3430,1749:-420.167,-142.022,-111.618,-278.177,0,-262.824	1/2:42:0,23,17:0:0:23,17:786,599:-112.616,-48.8552,-41.9315,-63.8409,0,-58.7233	1/1:55:0,54,0:0:0:54,0:1816,0:-163.367,-16.2556,0,-163.367,-16.2556,-163.367	1/2:61:0,40,21:0:0:40,21:1370,717:-169.707,-58.4949,-46.4537,-111.553,0,-105.232	1/1:69:0,69,0:0:0:69,0:2325,0:-209.487,-20.7711,0,-209.487,-20.7711,-209.487	1/2:153:0,90,59:0:0:90,59:3066,2019:-412.587,-163.887,-136.794,-248.769,0,-231.008	1/1:42:0,42,0:0:0:42,0:1426,0:-128.176,-12.6433,0,-128.176,-12.6433,-128.176	1/2:94:0,53,41:0:0:53,41:1780,1384:-256.652,-112.505,-96.5504,-144.483,0,-132.141	1/1:128:0,127,0:0:0:127,0:4377,0:-393.811,-38.2308,0,-393.811,-38.2308,-393.811	1/2:9:0,3,6:0:0:3,6:104,212:-26.0664,-17.6153,-16.7122,-8.79988,0,-6.9937	1/2:75:0,47,27:0:0:47,27:1628,917:-206.68,-74.47,-60.3216,-132.327,0,-124.199	1/2:15:0,10,4:0:0:10,4:333,140:-38.3848,-11.4383,-8.42797,-26.9886,0,-25.7845	1/1:5:0,5,0:0:0:5,0:169,0:-15.5423,-1.50515,0,-15.5423,-1.50515,-15.5423	1/1:122:0,122,0:0:0:122,0:4169,0:-375.324,-36.7257,0,-375.324,-36.7257,-375.324	1/1:26:0,25,0:0:0:25,0:859,0:-77.319,-7.52575,0,-77.319,-7.52575,-77.319	1/1:7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chr04	3697384	.	A	G	53300.9	PASS	AB=0.560162;ABP=173.627;AC=45;AF=0.239362;AN=188;AO=3064;CIGAR=1X;DP=11233;DPB=11233;DPRA=1.15662;EPP=6621.7;EPPR=17726.6;GTI=3;LEN=1;MEANALT=1.03509;MQM=59.7412;MQMR=59.9767;NS=94;NUMALT=1;ODDS=0.386999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=109168;QR=292785;RO=8166;RPL=3060;RPP=6621.7;RPPR=17735.3;RPR=4;RUN=1;SAF=3064;SAP=6656.4;SAR=0;SRF=8165;SRP=17726.6;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:28:6,22:6:216:22:773:-61.4588,0,-11.3617	0/0:144:144,0:144:5149:0:0:0,-43.3483,-463.55	0/0:143:143,0:143:5140:0:0:0,-43.0473,-462.739	0/0:207:206,1:206:7375:1:36:0,-58.7149,-660.199	0/0:81:80,1:80:2864:1:36:0,-20.7852,-254.399	0/0:79:79,0:79:2836:0:0:0,-23.7814,-254.538	0/1:178:80,98:80:2880:98:3512:-262.592,0,-205.852	0/0:150:149,1:149:5352:1:36:0,-41.5562,-478.212	0/1:96:40,56:40:1423:56:2004:-151.717,0,-99.4678	0/0:95:94,1:94:3368:1:36:0,-24.9996,-299.548	0/0:123:123,0:123:4424:0:0:0,-37.0267,-398.329	0/0:126:126,0:126:4519:0:0:0,-37.9298,-406.876	0/1:83:45,38:45:1607:38:1350:-96.7837,0,-119.934	0/0:139:139,0:139:4980:0:0:0,-41.8432,-448.348	0/1:78:43,35:43:1544:35:1240:-88.4218,0,-115.773	0/1:86:40,46:40:1431:46:1648:-122.713,0,-103.198	0/0:81:81,0:81:2899:0:0:0,-24.3834,-261.145	0/1:80:49,31:49:1760:31:1095:-74.7767,0,-134.601	0/1:70:36,34:36:1292:34:1192:-86.4952,0,-95.5117	0/1:287:108,179:108:3869:179:6419:-491.376,0,-262.007	0/1:207:119,88:119:4264:88:3119:-218.611,0,-321.625	0/1:194:37,157:37:1320:157:5599:-445.632,0,-60.7021	0/1:132:48,84:48:1724:84:2996:-229.941,0,-115.709	0/0:87:83,4:83:2984:4:144:0,-12.876,-255.478	0/1:74:48,26:48:1720:26:925:-61.2907,0,-132.809	0/1:361:170,190:170:6104:190:6777:-501.186,0,-440.728	0/1:212:120,92:120:4308:92:3304:-233.746,0,-324.077	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/1:349:160,189:160:5736:189:6765:-503.715,0,-411.296	0/1:174:67,107:67:2408:107:3819:-291.42,0,-164.597	0/0:160:160,0:160:5728:0:0:0,-48.1648,-515.637	0/1:18:6,12:6:216:12:423:-32.9842,0,-14.372	0/1:40:18,22:18:639:22:792:-59.5598,0,-45.797	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:19:8,11:8:284:11:388:-29.5378,0,-20.1838	0/0:290:290,0:290:10396:0:0:0,-87.2987,-935.558	0/0:186:186,0:186:6679:0:0:0,-55.9916,-601.155	0/0:132:132,0:132:4735:0:0:0,-39.736,-426.271	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:182:68,114:68:2432:114:4072:-311.877,0,-164.348	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.843	0/1:176:77,99:77:2768:99:3521:-264.104,0,-196.379	0/1:92:47,45:47:1688:45:1611:-117.582,0,-124.512	0/0:88:88,0:88:3168:0:0:0,-26.4906,-285.315	0/1:120:61,59:61:2188:59:2112:-154.225,0,-161.062	0/1:183:89,94:89:3200:94:3344:-245.913,0,-233.134	0/1:248:115,133:115:4117:133:4724:-350.65,0,-296.057	0/0:113:110,3:110:3948:3:108:0,-23.9412,-345.436	0/0:164:162,2:162:5816:2:72:0,-42.5322,-516.714	0/0:136:136,0:136:4880:0:0:0,-40.9401,-439.351	0/1:19:8,11:8:288:11:387:-29.2855,0,-20.5478	0/1:192:74,118:74:2651:118:4202:-320.544,0,-181.037	0/1:64:33,31:33:1180:31:1104:-80.3598,0,-87.2421	0/0:29:28,1:28:1004:1:25:0,-6.23073,-88.1767	0/0:184:183,1:183:6543:1:36:0,-51.7912,-585.351	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:16:4,12:4:144:12:428:-34.0423,0,-8.49714	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/1:149:73,76:73:2624:76:2698:-198.206,0,-191.553	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:188:188,0:188:6735:0:0:0,-56.5936,-606.219	0/0:179:178,1:178:6376:1:36:0,-50.2861,-570.331	0/1:51:7,43:7:252:43:1544:-123.948,0,-7.71448	0/0:98:98,0:98:3520:0:0:0,-29.5009,-317.009	0/1:238:82,156:82:2928:156:5547:-427.434,0,-191.93	0/1:137:27,110:27:968:110:3917:-311.375,0,-46.1963	0/0:55:55,0:55:1980:0:0:0,-16.5566,-178.474	0/0:95:95,0:95:3400:0:0:0,-28.5978,-306.215	0/0:111:111,0:111:3964:0:0:0,-33.4143,-356.949	0/1:24:11,13:11:396:13:464:-34.8719,0,-28.758	0/0:120:120,0:120:4300:0:0:0,-36.1236,-387.177	0/1:80:31,49:31:1112:49:1756:-134.228,0,-76.3056	0/0:198:196,2:196:7017:2:72:0,-52.7672,-624.751	0/0:173:173,0:173:6208:0:0:0,-52.0782,-558.808	0/1:126:58,68:58:2080:68:2422:-180.305,0,-149.537	0/1:100:43,57:43:1540:57:2048:-154.47,0,-108.79	0/1:20:8,12:8:288:12:432:-33.196,0,-20.2468	0/0:136:135,0:135:4852:0:0:0,-40.639,-436.472	0/0:144:143,1:143:5124:1:36:0,-39.75,-457.703	0/0:185:185,0:185:6632:0:0:0,-55.6905,-596.958	0/0:124:124,0:124:4425:0:0:0,-37.3277,-398.421	0/0:101:101,0:101:3623:0:0:0,-30.404,-326.274	0/1:124:67,57:67:2404:57:2024:-145.101,0,-179.289	0/0:183:183,0:183:6564:0:0:0,-55.0885,-590.84	0/1:67:36,31:36:1283:31:1099:-79.0495,0,-95.6036	0/0:117:117,0:117:4187:0:0:0,-35.2205,-377.011	0/0:111:111,0:111:3987:0:0:0,-33.4143,-359.015	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.453	0/1:153:83,70:83:2984:70:2469:-176.387,0,-222.734	0/1:100:35,65:35:1260:65:2250:-172.653,0,-83.6025	0/0:113:113,0:113:4045:0:0:0,-34.0164,-364.236	0/0:133:132,1:132:4723:1:36:0,-36.4387,-421.63
chr04	3823111	.	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chr04	4193459	.	G	A	34141.7	PASS	AB=0.513743;ABP=9.39643;AC=46;AF=0.244681;AN=188;AO=2016;CIGAR=1X;DP=7962;DPB=7962;DPRA=1.15712;EPP=4363.34;EPPR=12780.2;GTI=0;LEN=1;MEANALT=1.09615;MQM=59.9544;MQMR=59.9963;NS=94;NUMALT=1;ODDS=5.6934;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72098;QR=211808;RO=5936;RPL=2;RPP=4363.34;RPPR=12788.9;RPR=2014;RUN=1;SAF=2016;SAP=4380.7;SAR=0;SRF=5935;SRP=12884.2;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:77:33,44:33:1180:44:1569:-118.32,0,-83.3287	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.993	0/0:129:129,0:129:4602:0:0:0,-38.8329,-414.345	0/0:120:120,0:120:4291:0:0:0,-36.1236,-386.367	0/0:56:56,0:56:1984:0:0:0,-16.8577,-178.832	0/0:52:52,0:52:1848:0:0:0,-15.6536,-166.6	0/1:124:72,52:72:2572:52:1834:-128.009,0,-194.402	0/0:116:116,0:116:4134:0:0:0,-34.9195,-372.242	0/1:53:35,18:35:1244:18:648:-42.6973,0,-96.3101	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/0:93:93,0:93:3325:0:0:0,-27.9958,-299.466	0/0:126:126,0:126:4489:0:0:0,-37.9298,-404.179	0/0:113:113,0:113:4044:0:0:0,-34.0164,-364.148	0/0:78:78,0:78:2792:0:0:0,-23.4803,-251.52	0/1:95:47,48:47:1673:48:1724:-126.848,0,-122.257	0/1:76:49,27:49:1755:27:957:-63.5656,0,-135.355	0/0:45:45,0:45:1578:0:0:0,-13.5463,-142.306	0/1:41:24,17:24:852:17:612:-43.0712,0,-64.6582	0/1:61:37,23:37:1328:23:828:-56.5637,0,-101.544	0/1:157:82,75:82:2935:75:2688:-194.903,0,-217.122	0/1:131:73,58:73:2601:58:2072:-147.316,0,-194.902	0/1:54:16,38:16:576:38:1360:-106.445,0,-35.9194	0/1:98:55,43:55:1976:43:1521:-107.68,0,-148.614	0/0:62:62,0:62:2204:0:0:0,-18.6639,-198.623	0/1:98:40,58:40:1411:58:2076:-157.292,0,-97.7856	0/1:156:88,68:88:3148:68:2433:-172.259,0,-236.585	0/1:192:79,113:79:2776:113:4052:-307.069,0,-192.281	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:161:81,80:81:2881:80:2875:-210.492,0,-211.06	0/1:64:27,37:27:968:37:1313:-99.2038,0,-68.1714	0/0:103:103,0:103:3684:0:0:0,-31.0061,-331.763	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:18:13,5:13:468:5:180:-11.1335,0,-37.0411	0/0:19:18,0:18:644:0:0:0,-5.41854,-57.9309	0/0:15:15,0:15:521:0:0:0,-4.51545,-47.2163	0/1:19:9,10:9:324:10:360:-26.9682,0,-23.7863	0/0:202:201,1:201:7181:1:36:0,-57.2098,-642.748	0/0:72:72,0:72:2519:0:0:0,-21.6742,-226.959	0/1:66:31,35:31:1108:35:1252:-93.1171,0,-80.163	0/1:15:8,7:8:288:7:252:-18.5135,0,-21.752	0/1:112:56,55:56:1989:55:1964:-143.261,0,-145.508	0/0:66:66,0:66:2355:0:0:0,-19.868,-212.208	0/1:160:65,95:65:2327:95:3399:-257.959,0,-161.524	0/1:62:33,29:33:1180:29:1040:-75.2459,0,-87.8442	0/0:75:75,0:75:2679:0:0:0,-22.5772,-241.284	0/1:63:31,32:31:1108:32:1144:-84.3046,0,-81.0661	0/1:102:38,64:38:1353:64:2281:-174.845,0,-91.3633	0/1:123:53,70:53:1879:70:2491:-187.415,0,-132.361	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.763	0/0:76:76,0:76:2709:0:0:0,-22.8783,-244.053	0/0:75:74,0:74:2645:0:0:0,-22.2762,-237.935	0/1:23:7,16:7:252:16:576:-45.2513,0,-16.1053	0/1:94:51,43:51:1824:43:1540:-110.596,0,-136.144	0/1:66:36,30:36:1273:30:1076:-77.2849,0,-95.0029	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:104:104,0:104:3709:0:0:0,-31.3071,-334.011	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:16:11,5:11:366:5:180:-11.7356,0,-28.442	0/1:109:66,43:66:2345:43:1536:-105.721,0,-178.496	0/0:134:132,1:132:4698:1:36:0,-36.7236,-419.457	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:100:44,56:44:1580:56:1992:-149.444,0,-112.389	0/0:137:130,7:130:4652:7:252:0,-18.2121,-395.813	0/1:90:36,54:36:1296:54:1923:-146.253,0,-89.8512	0/0:63:62,0:62:2228:0:0:0,-18.6639,-200.424	0/1:150:63,86:63:2247:86:3092:-233.293,0,-157.28	0/1:154:57,97:57:2040:97:3468:-265.974,0,-137.513	0/0:100:100,0:100:3573:0:0:0,-30.103,-321.776	0/0:66:65,0:65:2321:0:0:0,-19.5669,-208.789	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/1:25:11,14:11:392:14:504:-38.1723,0,-28.0943	0/0:87:84,3:84:2984:3:108:0,-16.1144,-258.716	0/1:74:33,41:33:1180:41:1453:-108.788,0,-84.2318	0/0:120:119,0:119:4252:0:0:0,-35.8226,-382.649	0/0:142:139,3:139:4975:3:108:0,-32.6711,-437.822	0/1:124:67,57:67:2399:57:2029:-145.554,0,-178.838	0/1:105:50,55:50:1769:55:1976:-146.506,0,-127.883	0/1:13:6,7:6:212:7:248:-18.7508,0,-15.5114	0/0:81:81,0:81:2880:0:0:0,-24.3834,-259.438	0/0:56:56,0:56:2003:0:0:0,-16.8577,-180.543	0/0:180:180,0:180:6438:0:0:0,-54.1854,-579.506	0/0:58:58,0:58:2054:0:0:0,-17.4597,-185.128	0/0:125:125,0:125:4452:0:0:0,-37.6287,-400.85	0/1:61:27,33:27:937:33:1188:-88.807,0,-66.22	0/0:132:132,0:132:4717:0:0:0,-39.736,-424.688	0/1:20:7,13:7:248:13:468:-36.439,0,-16.6436	0/1:69:38,31:38:1364:31:1112:-79.6203,0,-102.29	0/0:94:93,1:93:3328:1:36:0,-24.6985,-296.14	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.503	0/1:136:72,64:72:2564:64:2296:-165.961,0,-190.071	0/1:80:31,49:31:1116:49:1760:-134.601,0,-76.6693	0/0:98:98,0:98:3508:0:0:0,-29.5009,-315.93	0/0:138:138,0:138:4920:0:0:0,-41.5421,-442.953
chr04	4348079	.	CAGT	TAT	17849.8	PASS	AB=0.428678;ABP=181.426;AC=46;AF=0.244681;AN=188;AO=1737;CIGAR=1X1M1D1M;DP=9183;DPB=8747.5;DPRA=0.876748;EPP=3774.86;EPPR=16104.5;GTI=4;LEN=3;MEANALT=1.22;MQM=31.4859;MQMR=36.8266;NS=94;NUMALT=1;ODDS=2.06422;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61206;QR=257497;RO=7415;RPL=0;RPP=3774.86;RPPR=16104.5;RPR=1737;RUN=1;SAF=1737;SAP=3774.86;SAR=0;SRF=7415;SRP=16104.5;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:30,13:30:1017:13:446:-21.7056,0,-72.1421	0/0:42:42,0:42:1467:0:0:0,-12.6433,-122.262	0/0:246:246,0:246:8591:0:0:0,-74.0534,-712.915	0/0:218:217,0:217:7517:0:0:0,-65.3235,-637.481	0/0:54:53,0:53:1837:0:0:0,-15.9546,-153.126	0/0:50:50,0:50:1767:0:0:0,-15.0515,-146.585	0/1:71:42,27:42:1460:27:945:-52.3461,0,-103.706	0/0:135:133,1:133:4577:1:34:0,-38.483,-376.138	0/1:76:57,19:57:1955:19:678:-29.4782,0,-140.473	0/0:79:79,0:79:2745:0:0:0,-23.7814,-232.202	0/0:153:151,0:151:5330:0:0:0,-45.4555,-450.172	0/0:107:106,0:106:3736:0:0:0,-31.9092,-309.343	0/0:91:91,0:91:3180:0:0:0,-27.3937,-262.127	0/0:252:252,0:252:8649:0:0:0,-75.8596,-721.293	0/1:80:35,45:35:1232:45:1607:-98.4307,0,-80.7814	0/1:95:40,55:40:1395:55:1954:-122.041,0,-85.3866	0/0:87:87,0:87:3021:0:0:0,-26.1896,-249.216	0/1:39:20,19:20:691:19:658:-38.7573,0,-46.1884	0/1:59:26,33:26:911:33:1171:-71.3801,0,-57.529	0/1:136:83,53:83:2890:53:1890:-103.914,0,-201.366	0/1:200:132,68:132:4480:68:2362:-121.431,0,-314.653	0/1:45:18,27:18:631:27:938:-56.5896,0,-41.409	0/1:56:31,25:31:1063:25:862:-50.7476,0,-73.6884	0/0:62:58,3:58:1997:3:108:0,-10.0917,-158.57	0/1:53:31,22:31:1073:22:777:-43.7617,0,-73.8792	0/1:198:105,92:105:3646:92:3230:-183.156,0,-255.273	0/1:215:133,82:133:4682:82:2876:-155.652,0,-320.369	0/0:23:22,0:22:716:0:0:0,-6.62266,-58.8698	0/1:191:111,80:111:3840:80:2822:-153.861,0,-272.076	0/1:103:63,40:63:2131:40:1394:-73.5365,0,-148.374	0/0:139:138,0:138:4798:0:0:0,-41.5421,-406.214	0/1:4:2,2:2:70:2:72:-4.5995,0,-4.9582	0/1:25:13,12:13:444:12:419:-24.2535,0,-29.8501	0/0:6:6,0:6:216:0:0:0,-1.80618,-18.1446	0/0:20:20,0:20:680:0:0:0,-6.0206,-54.6483	0/1:38:25,13:25:854:13:442:-22.7532,0,-59.8159	0/0:201:201,0:201:7043:0:0:0,-60.507,-605.41	0/0:85:84,0:84:2912:0:0:0,-25.2865,-241.786	0/1:93:47,45:47:1674:45:1575:-92.6018,0,-110.88	0/1:4:3,1:3:107:1:36:-1.85042,0,-7.98381	0/1:111:61,50:61:2127:50:1748:-98.5991,0,-142.388	0/0:46:46,0:46:1604:0:0:0,-13.8474,-132.638	0/1:137:88,49:88:3007:49:1717:-91.3288,0,-208.955	0/1:56:22,34:22:759:34:1203:-76.107,0,-47.2587	0/0:63:63,0:63:2206:0:0:0,-18.9649,-187.444	0/1:59:44,15:44:1522:15:516:-19.9382,0,-113.829	0/1:101:55,46:55:1897:46:1597:-90.985,0,-127.238	0/1:132:78,54:78:2717:54:1886:-104.549,0,-189.863	0/0:67:67,0:67:2314:0:0:0,-20.169,-197.095	0/0:137:137,0:137:4789:0:0:0,-41.2411,-405.51	0/0:72:72,0:72:2492:0:0:0,-21.6742,-216.659	0/1:19:13,6:13:454:6:214:-11.0191,0,-32.6663	0/1:111:60,51:60:2113:51:1824:-105.178,0,-142.099	0/1:98:72,25:72:2478:25:885:-37.5371,0,-185.639	0/0:5:4,0:4:143:0:0:0,-1.20412,-11.9194	0/0:209:208,1:208:7272:1:36:0,-59.8607,-598.013	0/0:22:22,0:22:764:0:0:0,-6.62266,-65.4938	0/0:15:15,0:15:532:0:0:0,-4.51545,-46.3371	0/1:14:11,3:11:379:3:108:-2.28104,0,-28.298	0/1:74:50,24:50:1692:24:848:-42.509,0,-119.838	0/0:125:125,0:125:4319:0:0:0,-37.6287,-367.928	0/0:12:12,0:12:417:0:0:0,-3.61236,-35.9304	0/1:139:70,66:70:2430:66:2363:-134.551,0,-169.341	0/0:139:138,1:138:4814:1:36:0,-38.7886,-406.311	0/1:64:49,15:49:1679:15:526:-21.6544,0,-121.408	0/0:120:120,0:120:4231:0:0:0,-36.1236,-357.948	0/1:164:100,63:100:3480:63:2202:-120.36,0,-246.105	0/1:118:47,71:47:1641:71:2504:-155.285,0,-103.582	0/0:147:147,0:147:5059:0:0:0,-44.2514,-421.005	0/0:38:38,0:38:1330:0:0:0,-11.4391,-110.552	0/0:66:64,0:64:2242:0:0:0,-19.2659,-193.26	0/1:30:16,14:16:556:14:489:-28.9701,0,-38.6718	0/0:101:101,0:101:3531:0:0:0,-30.404,-292.494	0/1:94:65,28:65:2277:28:1006:-47.2324,0,-161.446	0/0:470:470,0:470:16021:0:0:0,-141.484,-1333.06	0/0:133:132,0:132:4627:0:0:0,-39.736,-393.154	0/1:130:77,53:77:2684:53:1869:-104.854,0,-183.426	0/1:78:38,40:38:1281:40:1434:-86.6074,0,-83.0076	0/1:8:6,2:6:216:2:70:-3.33185,0,-15.7364	0/0:74:74,0:74:2586:0:0:0,-22.2762,-212.915	0/0:158:157,0:157:5418:0:0:0,-47.2617,-452.068	0/0:163:163,0:163:5733:0:0:0,-49.0679,-480.68	0/0:81:81,0:81:2831:0:0:0,-24.3834,-240.489	0/0:86:84,0:84:2933:0:0:0,-25.2865,-246.108	0/1:59:22,37:22:775:37:1313:-80.5629,0,-48.4463	0/0:153:153,0:153:5380:0:0:0,-46.0576,-454.516	0/1:14:6,8:6:216:8:288:-17.2004,0,-13.9302	0/1:91:48,43:48:1664:43:1535:-87.7862,0,-111.645	0/0:97:96,0:96:3384:0:0:0,-28.8989,-278.549	0/0:114:114,0:114:3957:0:0:0,-34.3174,-326.341	0/1:244:128,116:128:4438:116:4107:-239.266,0,-293.094	0/1:68:23,45:23:804:45:1586:-102.141,0,-46.9045	0/0:73:71,0:71:2412:0:0:0,-21.3731,-205.96	0/0:109:109,0:109:3845:0:0:0,-32.8123,-323.711
chr04	4348091	.	CA	TG,CG	174146	PASS	AB=0.577156,0.420071;ABP=208.081,223.09;AC=142,46;AF=0.755319,0.244681;AN=188;AO=7400,1680;CIGAR=2X,1M1X;DP=9098;DPB=9098;DPRA=0,0.994093;EPP=15941.9,1607.05;EPPR=5.18177;GTI=5;LEN=2,1;MEANALT=1.74468,2.17544;MQM=36.7596,31.6298;MQMR=45;NS=94;NUMALT=2;ODDS=0.942684;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=259066,59734;QR=25;RO=1;RPL=7385,1397;RPP=15941.9,1607.05;RPPR=5.18177;RPR=15,283;RUN=1,1;SAF=7400,1680;SAP=16071.9,3651.08;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:46:0,33,13:0:0:33,13:1158,464:-117.205,-31.9891,-22.0551,-85.5249,0,-81.6115	1/1:42:0,41,1:0:0:41,1:1407,36:-117.124,-12.3422,0,-114.189,-9.04869,-113.888	1/1:244:0,242,0:0:0:242,0:8517,0:-703.28,-72.8493,0,-703.28,-72.8493,-703.28	1/1:217:0,217,0:0:0:217,0:7547,0:-639.273,-65.3235,0,-639.273,-65.3235,-639.273	1/1:53:0,53,0:0:0:53,0:1848,0:-153.297,-15.9546,0,-153.297,-15.9546,-153.297	1/1:50:0,50,0:0:0:50,0:1737,0:-144.395,-15.0515,0,-144.395,-15.0515,-144.395	1/2:70:0,44,26:0:0:44,26:1540,927:-179.902,-63.5267,-50.2814,-116.688,0,-108.861	1/1:135:0,133,1:0:0:133,1:4568,36:-375.311,-40.037,0,-373.735,-38.5285,-373.434	1/2:76:0,57,19:0:0:57,19:2009,684:-195.77,-46.8185,-29.6598,-149.261,0,-143.542	1/1:79:0,79,0:0:0:79,0:2746,0:-231.858,-23.7814,0,-231.858,-23.7814,-231.858	1/1:154:0,154,0:0:0:154,0:5375,0:-453.803,-46.3586,0,-453.803,-46.3586,-453.803	1/1:107:0,106,1:0:0:106,1:3681,36:-304.677,-31.9092,0,-301.742,-28.6156,-301.441	1/1:90:0,88,1:0:0:88,1:3099,36:-253.192,-26.4906,0,-250.254,-23.5427,-249.953	1/1:253:0,253,0:0:0:253,0:8801,0:-729.322,-76.1606,0,-729.322,-76.1606,-729.322	1/2:81:0,34,47:0:0:34,47:1211,1673:-205.904,-113.954,-103.719,-92.2704,0,-78.122	1/2:91:0,38,53:0:0:38,53:1317,1877:-224.55,-128.847,-117.408,-96.0124,0,-80.0578	1/1:87:0,87,0:0:0:87,0:3029,0:-248.565,-26.1896,0,-248.565,-26.1896,-248.565	1/2:39:0,20,19:0:0:20,19:718,671:-98.6509,-45.3727,-39.3521,-53.5909,0,-47.8714	1/2:57:0,26,31:0:0:26,31:911,1108:-142.029,-74.7659,-66.9391,-67.5742,0,-58.2422	1/2:135:0,83,51:0:0:83,51:2885,1819:-341.73,-124.393,-99.4078,-217.458,0,-202.105	1/2:197:0,133,64:0:0:133,64:4624,2275:-498.018,-154.251,-114.214,-344.074,0,-324.808	1/2:46:0,19,26:0:0:19,26:668,928:-112.179,-60.1032,-54.3837,-52.1085,0,-44.2817	1/2:54:0,31,23:0:0:31,23:1075,812:-137.973,-56.2695,-46.9376,-82.0165,0,-75.0928	1/1:60:0,56,3:0:0:56,3:1992,104:-164.121,-16.8577,0,-156.918,-9.68729,-156.015	1/2:52:1,31,20:1:25:31,20:1103,694:-126.99,-45.4106,-38.0215,-79.9939,0,-75.916	1/2:196:0,104,91:0:0:104,91:3683,3230:-498.982,-214.397,-183.09,-284.71,0,-257.316	1/2:213:0,133,80:0:0:133,80:4693,2839:-537.842,-192.173,-152.136,-345.976,0,-321.894	1/1:21:0,21,0:0:0:21,0:725,0:-58.427,-6.32163,0,-58.427,-6.32163,-58.427	1/2:190:0,112,78:0:0:112,78:3871,2752:-480.365,-182.619,-148.904,-298.054,0,-274.574	1/2:100:0,61,39:0:0:61,39:2145,1383:-250.453,-91.8825,-73.5196,-158.876,0,-147.135	1/1:139:0,139,0:0:0:139,0:4845,0:-408.927,-41.8432,0,-408.927,-41.8432,-408.927	1/2:4:0,2,2:0:0:2,2:72,72:-10.55,-5.20156,-4.5995,-5.66609,0,-5.06403	1/2:26:0,14,12:0:0:14,12:462,432:-63.2678,-28.8029,-24.5885,-34.7667,0,-31.1544	1/1:6:0,6,0:0:0:6,0:216,0:-18.1446,-1.80618,0,-18.1446,-1.80618,-18.1446	1/1:19:0,18,1:0:0:18,1:624,36:-49.9961,-5.41854,0,-47.7595,-2.89849,-47.4585	1/2:38:0,25,13:0:0:25,13:865,464:-95.0909,-30.9583,-23.4325,-64.436,0,-60.5226	1/1:198:0,198,0:0:0:198,0:6941,0:-596.978,-59.6039,0,-596.978,-59.6039,-596.978	1/1:85:0,84,0:0:0:84,0:2955,0:-242.911,-25.2865,0,-242.911,-25.2865,-242.911	1/2:93:0,47,46:0:0:47,46:1649,1628:-231.861,-109.96,-95.812,-122.21,0,-108.363	1/2:4:0,3,1:0:0:3,1:108,36:-10.7761,-2.75351,-1.85042,-8.33418,0,-8.03315	1/2:109:0,60,49:0:0:60,49:2141,1734:-272.82,-115.713,-97.6512,-157.415,0,-142.665	1/1:45:0,45,0:0:0:45,0:1554,0:-128.66,-13.5464,0,-128.66,-13.5464,-128.66	1/2:131:0,88,43:0:0:88,43:3062,1544:-331.345,-105.066,-78.5755,-226.588,0,-213.643	1/2:54:0,22,32:0:0:22,32:724,1114:-131.187,-76.7996,-70.1769,-54.6922,0,-45.0593	1/1:61:0,61,0:0:0:61,0:2121,0:-179.831,-18.3628,0,-179.831,-18.3628,-179.831	1/2:58:0,44,14:0:0:44,14:1526,504:-150.026,-31.9093,-18.664,-118.413,0,-114.198	1/2:101:0,56,45:0:0:56,45:1929,1594:-249.592,-106.919,-90.0613,-142.979,0,-129.432	1/2:129:0,76,53:0:0:76,53:2662,1904:-328.955,-127.092,-104.214,-202.174,0,-186.22	1/1:67:0,67,0:0:0:67,0:2353,0:-199.745,-20.169,0,-199.745,-20.169,-199.745	1/1:137:0,137,0:0:0:137,0:4863,0:-410.233,-41.2411,0,-410.233,-41.2411,-410.233	1/1:72:0,72,0:0:0:72,0:2551,0:-220.958,-21.6742,0,-220.958,-21.6742,-220.958	1/2:18:0,13,5:0:0:13,5:464,180:-47.4508,-12.5457,-8.63233,-35.2178,0,-33.7126	1/2:107:0,58,47:0:0:58,47:2060,1684:-266.154,-113.638,-96.1782,-152.542,0,-138.394	1/2:98:0,72,25:0:0:72,25:2529,896:-256.29,-59.7731,-38.0989,-196.593,0,-189.067	1/1:5:0,5,0:0:0:5,0:169,0:-14.2455,-1.50515,0,-14.2455,-1.50515,-14.2455	1/1:209:0,208,1:0:0:208,1:7380,36:-605.548,-62.6142,0,-603.1,-59.8607,-602.799	1/1:22:0,22,0:0:0:22,0:766,0: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chr04	4787514	.	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chr04	8275750	.	ATTA	ATTG	184895	PASS	AB=0.476354;ABP=31.2506;AC=142;AF=0.755319;AN=188;AO=8862;CIGAR=3M1X;DP=11968;DPB=11969.5;DPRA=25.7269;EPP=19246.6;EPPR=6678.12;GTI=1;LEN=1;MEANALT=1.29032;MQM=59.9738;MQMR=59.9821;NS=94;NUMALT=1;ODDS=0.612634;PAIRED=0;PAIREDR=0;PAO=3.5;PQA=122;PQR=0;PRO=0;QA=315197;QR=108017;RO=3074;RPL=0;RPP=19246.6;RPPR=6678.12;RPR=8862;RUN=1;SAF=8862;SAP=19246.6;SAR=0;SRF=3074;SRP=6678.12;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:40,19:40:1390:19:684:-44.1296,0,-107.635	1/1:241:0,240:0:0:240:8486:-763.464,-72.2472,0	1/1:182:0,182:0:0:182:6471:-582.475,-54.7875,0	1/1:346:0,344:0:0:344:12246:-1101.73,-103.554,0	1/1:136:0,136:0:0:136:4839:-435.661,-40.9401,0	1/1:72:0,68:0:0:68:2423:-217.969,-20.47,0	0/1:191:110,80:110:3826:80:2849:-199.23,0,-287.129	1/1:175:2,171:2:66:171:6109:-543.671,-46.1027,0	0/1:188:89,99:89:3155:99:3522:-260.594,0,-227.584	1/1:138:0,137:0:0:137:4851:-436.434,-41.2411,0	1/1:40:0,40:0:0:40:1402:-126.473,-12.0412,0	1/1:76:0,76:0:0:76:2698:-243.062,-22.8783,0	1/1:60:0,59:0:0:59:2120:-190.817,-17.7608,0	1/1:37:0,37:0:0:37:1302:-117.477,-11.1381,0	0/1:62:41,21:41:1447:21:756:-49.7034,0,-111.861	0/1:48:25,23:25:883:23:828:-60.3947,0,-65.3377	1/1:57:0,57:0:0:57:2029:-182.881,-17.1587,0	0/1:62:31,31:31:1110:31:1112:-81.7275,0,-81.5478	0/1:43:18,25:18:633:25:892:-67.6554,0,-44.3525	0/1:400:210,189:210:7342:189:6764:-488.451,0,-540.468	0/1:218:116,102:116:4034:102:3607:-259.21,0,-297.63	0/1:126:74,52:74:2591:52:1856:-129.39,0,-195.511	0/1:126:67,59:67:2335:59:2086:-150.077,0,-172.468	1/1:231:14,217:14:497:217:7734:-651.029,-24.4733,0	1/1:92:0,92:0:0:92:3292:-296.499,-27.6948,0	0/1:459:245,214:245:8635:214:7649:-550.187,0,-638.992	0/1:246:111,135:111:3917:135:4827:-360.213,0,-278.674	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	0/1:358:182,176:182:6410:176:6269:-456.523,0,-469.21	0/1:138:80,58:80:2815:58:2066:-144.667,0,-212.049	1/1:179:0,179:0:0:179:6317:-568.622,-53.8844,0	0/1:18:6,12:6:209:12:432:-33.8027,0,-13.7318	0/1:12:4,8:4:142:8:288:-22.655,0,-9.51691	1/1:8:0,6:0:0:6:216:-19.4307,-1.80618,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:12:3,9:3:107:9:324:-25.8935,0,-6.36981	1/1:233:0,233:0:0:233:8338:-750.427,-70.14,0	1/1:167:0,167:0:0:167:5980:-538.242,-50.272,0	0/1:63:37,26:37:1319:26:932:-65.234,0,-100.047	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:236:121,115:121:4240:115:4078:-296.16,0,-310.743	1/1:38:0,38:0:0:38:1360:-122.701,-11.4391,0	0/1:204:113,91:113:3950:91:3245:-230.731,0,-294.287	0/1:113:58,55:58:2050:55:1938:-140.676,0,-150.755	1/1:81:0,80:0:0:80:2800:-252.03,-24.0824,0	0/1:112:61,51:61:2155:51:1821:-130.451,0,-160.503	0/1:179:91,88:91:3189:88:3111:-226.322,0,-233.344	0/1:261:138,123:138:4848:123:4346:-312.732,0,-357.914	1/1:158:0,158:0:0:158:5623:-506.19,-47.5627,0	1/1:173:0,173:0:0:173:6154:-553.9,-52.0782,0	1/1:221:0,220:0:0:220:7857:-706.928,-66.2266,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:205:86,118:86:3014:118:4172:-313.89,0,-209.725	0/1:38:16,22:16:562:22:784:-59.4448,0,-39.4703	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	1/1:179:0,179:0:0:179:6295:-566.644,-53.8844,0	1/1:62:2,60:2:72:60:2144:-186.391,-11.8271,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:25:13,12:13:463:12:417:-30.3345,0,-34.4813	0/1:70:42,28:42:1466:28:1008:-69.9643,0,-111.162	1/1:104:0,103:0:0:103:3643:-327.712,-31.0061,0	0/1:15:2,13:2:66:13:460:-37.2199,0,-1.7525	0/1:219:118,101:118:4110:101:3589:-257.292,0,-304.169	1/1:276:5,270:5:175:270:9605:-848.311,-67.0506,0	0/1:87:55,32:55:1951:32:1144:-77.0799,0,-149.676	1/1:124:0,123:0:0:123:4378:-393.906,-37.0267,0	0/1:325:157,168:157:5523:168:5951:-437.863,0,-399.371	0/1:149:98,50:98:3458:50:1800:-117.37,0,-266.524	1/1:24:0,24:0:0:24:852:-77.0004,-7.22472,0	1/1:69:0,66:0:0:66:2368:-213.053,-19.868,0	1/1:96:0,96:0:0:96:3432:-309.094,-28.8989,0	0/1:30:16,14:16:557:14:496:-35.9434,0,-41.4255	1/1:79:0,79:0:0:79:2828:-254.759,-23.7814,0	0/1:58:26,32:26:909:32:1147:-86.0799,0,-64.6662	1/1:183:0,182:0:0:182:6449:-580.138,-54.7875,0	1/1:251:2,249:2:68:249:8868:-791.586,-69.161,0	0/1:154:69,85:69:2469:85:3033:-226.84,0,-176.106	0/1:137:67,70:67:2367:70:2512:-185.091,0,-172.049	0/1:8:3,5:3:107:5:180:-14.1438,0,-7.57393	1/1:188:2,185:2:70:185:6599:-587.339,-50.0018,0	1/1:176:0,176:0:0:176:6228:-560.558,-52.9813,0	1/1:414:0,413:0:0:413:14664:-1319.16,-124.325,0	1/1:113:0,113:0:0:113:3978:-358.211,-34.0164,0	1/1:55:0,55:0:0:55:1945:-175.322,-16.5567,0	0/1:75:50,25:50:1773:25:869:-55.9466,0,-137.276	1/1:162:1,158:1:36:158:5594:-499.986,-44.6253,0	0/1:54:29,25:29:1041:25:885:-63.7109,0,-77.7489	0/1:79:36,43:36:1266:43:1531:-114.301,0,-90.461	1/1:76:0,76:0:0:76:2713:-244.412,-22.8783,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	0/1:71:37,34:37:1305:34:1210:-87.8321,0,-96.3776	0/1:82:50,32:50:1714:32:1125:-76.8716,0,-129.856	1/1:172:0,172:0:0:172:6119:-550.781,-51.7772,0	1/1:108:0,107:0:0:107:3813:-343.007,-32.2102,0
chr04	8574626	.	T	C	2.68469e-11	PASS	AB=0.312234;ABP=6055.32;AC=70;AF=0.37234;AN=188;AO=7443;CIGAR=1X;DP=26227;DPB=26227;DPRA=0;EPP=16165.3;EPPR=40761.5;GTI=69;LEN=1;MEANALT=1.14894;MQM=14.6127;MQMR=19.4585;NS=94;NUMALT=1;ODDS=29.7628;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=266379;QR=672823;RO=18770;RPL=0;RPP=16165.3;RPPR=40761.5;RPR=7443;RUN=1;SAF=7443;SAP=16165.3;SAR=0;SRF=18770;SRP=40761.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:148:111,37:111:3976:37:1328:-4.16969,0,-171.459	0/1:377:223,154:223:7996:154:5520:-83.365,0,-214.971	0/1:245:111,134:111:3980:134:4776:-98.7498,0,-105.661	0/1:727:514,212:514:18440:212:7588:-50.368,0,-650.413	0/0:196:150,46:150:5368:46:1652:0,-3.76031,-229.399	0/1:139:98,41:98:3497:41:1460:-13.4624,0,-161.442	0/1:107:81,26:81:2912:26:928:-3.22345,0,-91.9258	0/1:467:272,194:272:9756:194:6926:-111.953,0,-300.931	0/1:248:174,74:174:6240:74:2643:-29.3742,0,-221.373	0/1:408:302,106:302:10829:106:3804:-18.6158,0,-381.312	0/1:120:74,46:74:2664:46:1640:-22.7045,0,-93.5456	0/1:149:103,46:103:3696:46:1644:-12.6229,0,-176.971	0/1:118:73,45:73:2624:45:1608:-22.6936,0,-85.3751	0/1:142:101,41:101:3613:41:1468:-9.99814,0,-109.313	0/1:146:103,43:103:3696:43:1540:-10.3776,0,-83.9101	0/1:130:89,41:89:3177:41:1464:-16.3397,0,-112.272	0/1:98:58,39:58:2073:39:1400:-22.091,0,-59.5939	0/1:83:48,35:48:1724:35:1252:-25.1937,0,-46.5569	0/1:95:70,25:70:2516:25:900:-2.14453,0,-125.464	0/1:504:356,148:356:12776:148:5304:-43.0122,0,-472.41	0/1:445:301,144:301:10792:144:5164:-50.5119,0,-369.098	0/1:377:231,146:231:8300:146:5220:-79.2855,0,-185.765	0/1:211:165,46:165:5908:46:1652:-1.94046,0,-195.798	0/0:489:379,109:379:13608:109:3904:0,-9.61758,-463.826	0/0:146:116,30:116:4144:30:1068:0,-1.24075,-178.663	0/1:963:662,301:662:23748:301:10788:-84.9973,0,-727.519	0/1:428:310,117:310:11112:117:4208:-18.1298,0,-395.361	0/1:84:51,33:51:1828:33:1184:-13.3892,0,-65.8224	0/1:640:478,162:478:17160:162:5812:-13.0255,0,-512.618	0/0:594:482,112:482:17296:112:4005:0,-40.8141,-752.979	0/1:227:162,65:162:5789:65:2317:-13.8083,0,-143.277	0/1:438:296,141:296:10632:141:5044:-60.4696,0,-420.009	0/1:74:56,18:56:2016:18:648:-0.402072,0,-93.8523	0/0:245:194,51:194:6944:51:1828:0,-2.48205,-275.977	0/1:52:28,24:28:1004:24:852:-15.1019,0,-42.8905	0/0:159:138,21:138:4948:21:748:0,-18.0049,-255.618	0/1:378:251,127:251:9004:127:4536:-41.5597,0,-199.754	0/1:615:445,170:445:15909:170:6099:-32.8187,0,-698.625	0/0:118:92,26:92:3312:26:919:0,-0.713401,-164.208	0/0:96:75,21:75:2684:21:756:0,-2.2515,-123.894	0/1:300:187,113:187:6696:113:4040:-52.9059,0,-159.841	0/0:91:68,22:68:2448:22:788:0,-1.66644,-88.6603	0/1:605:453,152:453:16229:152:5436:-13.5523,0,-653.709	0/1:219:152,67:152:5460:67:2400:-18.8993,0,-224.121	0/1:145:92,53:92:3272:53:1896:-21.0722,0,-77.2877	0/1:246:155,90:155:5564:90:3220:-44.7381,0,-222.883	0/1:418:265,153:265:9472:153:5473:-69.7689,0,-336.31	0/0:529:411,118:411:14715:118:4218:0,-6.34884,-437.03	0/0:426:339,86:339:12160:86:3084:0,-19.4548,-473.14	0/1:439:309,129:309:11080:129:4632:-41.4509,0,-380.671	0/1:420:267,152:267:9580:152:5432:-73.5055,0,-313.154	0/0:185:144,41:144:5172:41:1460:0,-0.624545,-221.282	0/1:313:216,97:216:7748:97:3475:-31.5763,0,-366.282	0/0:35:29,6:29:1044:6:216:0,-1.78718,-45.9585	0/0:326:293,33:293:10516:33:1176:0,-56.276,-492.312	0/1:343:222,121:222:7929:121:4332:-56.5472,0,-205.316	0/0:106:88,18:88:3148:18:644:0,-10.7556,-132.122	0/0:129:100,28:100:3588:28:1000:0,-5.24182,-178.504	0/1:264:200,64:200:7163:64:2300:-0.539491,0,-315.954	0/1:125:89,36:89:3188:36:1284:-7.26852,0,-119.83	0/1:283:212,71:212:7571:71:2548:-5.06269,0,-208.03	0/1:220:169,51:169:6060:51:1828:-4.03417,0,-281.937	0/1:556:385,171:385:13804:171:6124:-45.8722,0,-470.808	0/0:625:481,143:481:17233:143:5116:0,-7.41533,-503.108	0/0:262:201,61:201:7200:61:2192:0,-4.71034,-247.942	0/1:256:190,66:190:6784:66:2364:-10.4824,0,-168.248	0/1:598:418,180:418:14934:180:6460:-53.616,0,-576.196	0/1:202:142,60:142:5058:60:2152:-17.9643,0,-142.852	0/1:71:49,22:49:1741:22:792:-6.2659,0,-81.6775	0/1:230:147,83:147:5268:83:2964:-47.8727,0,-215.798	0/1:198:152,46:152:5451:46:1636:-4.91555,0,-144.088	0/0:193:171,22:171:6124:22:788:0,-30.7738,-292.584	0/1:177:125,52:125:4480:52:1860:-12.1497,0,-176.932	0/1:101:39,62:39:1388:62:2216:-52.3092,0,-36.1449	0/1:343:243,100:243:8724:100:3572:-24.4874,0,-247.508	0/0:454:364,90:364:13084:90:3224:0,-21.9096,-406.76	0/1:275:200,75:200:7160:75:2692:-22.8821,0,-285.172	0/1:300:190,110:190:6824:110:3932:-50.219,0,-269.758	0/0:340:303,37:303:10880:37:1320:0,-49.6446,-613.088	0/1:399:294,105:294:10544:105:3759:-13.5205,0,-406.661	0/1:268:181,87:181:6462:87:3084:-31.9451,0,-272.003	0/1:694:501,193:501:17976:193:6920:-38.2089,0,-536.693	0/1:231:170,60:170:6112:60:2148:-7.38622,0,-149.149	0/1:104:76,28:76:2728:28:1008:-1.62031,0,-59.7001	0/0:237:183,54:183:6556:54:1940:0,-0.847764,-194.459	0/1:331:239,92:239:8549:92:3288:-15.8777,0,-346.419	0/1:104:79,25:79:2840:25:892:-1.0352,0,-122.767	0/1:139:79,60:79:2840:60:2136:-38.4783,0,-123.611	0/1:137:90,47:90:3236:47:1684:-21.1482,0,-131.902	0/1:86:53,33:53:1904:33:1176:-16.223,0,-78.7053	0/1:127:89,38:89:3181:38:1364:-11.0782,0,-130.88	0/1:114:68,46:68:2432:46:1652:-24.4622,0,-109.549	0/0:277:221,56:221:7944:56:1993:0,-6.41516,-200.712	0/0:205:164,41:164:5888:41:1452:0,-7.63549,-174.009
chr04	8574635	.	TAGAGGGAGAGGT	TGGAGGGAGAGGT,TAGAGAGAAGT	153368	PASS	AB=0.316888,0.17766;ABP=7470.38,23207.8;AC=82,26;AF=0.43617,0.138298;AN=188;AO=8149,4928;CIGAR=1M1X11M,4M2D4M1X2M;DP=26170;DPB=25392.6;DPRA=0,0;EPP=17698.3,10704;EPPR=27893.4;GTI=37;LEN=1,11;MEANALT=3.84946,3.82979;MQM=44.1477,28.1808;MQMR=16.6533;NS=94;NUMALT=2;ODDS=1.48034;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=290479,137189;QR=452652;RO=12844;RPL=0,0;RPP=17698.3,10704;RPPR=27893.4;RPR=8149,4928;RUN=1,1;SAF=8149,4928;SAP=17698.3,10704;SAR=0,0;SRF=12844;SRP=27893.4;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:150:65,61,23:65:2276:61,23:2176,637:-154.798,0,-92.3565,-130.01,-66.3304,-233.758	0/1:380:159,179,31:159:5622:179,31:6343,876:-459.486,0,-101.014,-445.985,-93.5045,-591.549	0/1:266:139,90,33:139:4907:90,33:3179,928:-212.472,0,-103.626,-189.452,-65.8095,-310.21	0/1:638:363,174,95:363:12810:174,95:6208,2615:-387.152,0,-399.46,-313.983,-269.346,-737.166	0/1:247:117,92,37:117:4136:92,37:3258,1030:-225.053,0,-131.101,-188.272,-86.752,-335.889	0/1:136:73,38,23:73:2565:38,23:1340,652:-84.9845,0,-111.972,-61.2274,-77.6385,-177.664	0/1:115:67,39,8:67:2342:39,8:1385,224:-90.6582,0,-66.8596,-95.2569,-63.0042,-171.419	0/1:448:208,156,78:208:7264:156,78:5547,2192:-380.881,0,-161.909,-290.565,-55.8819,-475.918	0/1:229:104,104,18:104:3642:104,18:3682,494:-262.717,0,-128.745,-259.668,-125.676,-414.272	0/1:350:181,95,73:181:6365:95,73:3390,2030:-216.287,0,-183.321,-129.447,-70.5245,-319.329	1/2:136:65,36,35:65:2292:36,35:1292,977:-96.0768,-12.4499,-57.5611,-47.338,0,-92.6857	0/1:167:79,58,30:79:2771:58,30:2062,840:-140.946,0,-110.819,-106.31,-69.8178,-225.506	1/2:143:47,70,24:47:1652:70,24:2503,672:-188.727,-2.45679,-25.7238,-156.139,0,-193.242	0/1:154:71,51,28:71:2505:51,28:1820,770:-124.344,0,-42.7641,-92.0565,-4.3917,-141.706	0/1:150:87,50,11:87:3092:50,11:1781,308:-116.353,0,-52.5566,-121.128,-46.1625,-185.408	0/1:126:85,30,10:85:3016:30,10:1080,280:-60.9334,0,-102.126,-67.0618,-91.6661,-175.145	0/1:130:44,70,13:44:1549:70,13:2473,350:-184.613,0,-23.1569,-173.802,-20.1384,-214.108	0/1:85:35,39,10:35:1224:39,10:1400,274:-101.704,0,-27.2142,-93.3174,-19.9923,-129.244	1/2:98:38,25,35:38:1352:25,35:886,981:-70.6462,-11.3159,-61.1637,-13.4761,0,-60.2514	0/1:519:254,162,95:254:8951:162,95:5805,2643:-388.319,0,-255.953,-280.418,-120.302,-556.49	0/1:419:231,119,64:231:8120:119,64:4228,1805:-268.532,0,-234.433,-211.786,-143.922,-462.726	0/1:390:249,103,31:249:8795:103,31:3681,854:-219.912,0,-181.59,-235.352,-153.045,-438.571	0/1:183:94,67,20:94:3330:67,20:2354,556:-159.118,0,-103.033,-148.444,-84.1995,-265.591	1/2:518:243,156,115:243:8581:156,115:5524,3184:-379.004,-11.4623,-175.131,-230.14,0,-406.101	0/1:171:75,67,29:75:2634:67,29:2408,812:-170.382,0,-96.2615,-136.488,-59.916,-244.143	1/2:1120:529,368,213:529:18645:368,213:13115,5963:-890.32,-0.75735,-305.733,-633.124,0,-984.719	0/1:452:242,176,30:242:8522:176,30:6260,839:-427.438,0,-269.063,-441.674,-263.41,-754.657	0/1:90:58,27,5:58:2049:27,5:956,140:-58.3743,0,-63.6198,-66.1071,-61.9995,-136.303	0/1:571:298,146,119:298:10520:146,119:5229,3295:-328.433,0,-195.84,-188.614,-10.1887,-392.522	0/1:556:267,164,119:267:9446:164,119:5865,3302:-389.177,0,-330.523,-239.404,-149.686,-583.417	0/1:233:109,100,20:109:3820:100,20:3592,560:-254.732,0,-56.1938,-248.594,-47.3115,-328.867	0/2:329:157,17,149:157:5519:17,149:608,4174:-243.804,-242.397,-389.18,0,-103.102,-106.926	1/2:72:26,12,34:26:922:12,34:428,924:-60.3663,-33.914,-60.9569,-3.74753,0,-24.0751	0/2:147:51,9,82:51:1793:9,82:324,2293:-145.571,-134.925,-187.209,0,-28.8918,-30.2236	0/2:46:25,3,18:25:871:3,18:108,507:-27.9119,-26.7787,-49.7569,0,-15.0887,-18.3375	0/2:118:24,6,85:24:834:6,85:216,2349:-156.864,-146.793,-175.811,0,-13.4122,-5.144	0/1:476:247,195,30:247:8749:195,30:6977,850:-483.408,0,-129.88,-498.191,-128.982,-677.735	0/1:684:329,194,157:329:11586:194,157:6853,4362:-447.713,0,-386.434,-242.51,-140.529,-640.025	1/2:128:43,41,44:43:1499:41,44:1457,1232:-120.236,-16.5565,-73.4043,-47.5042,0,-103.397	0/2:72:24,0,47:24:858:0,47:0,1310:-83.8999,-91.1247,-112.961,0,-21.6596,-7.51123	0/1:389:199,154,34:199:7003:154,34:5478,946:-378.579,0,-117.589,-372.598,-98.0258,-526.293	1/2:100:48,22,27:48:1712:22,27:792,749:-65.0011,-16.0147,-45.5948,-27.3251,0,-55.3331	0/1:564:262,151,143:262:9249:151,143:5407,3986:-353.739,0,-295.281,-154.407,-62.4651,-452.037	0/1:283:126,120,36:126:4480:120,36:4293,1002:-306.066,0,-138.111,-274.034,-104.236,-437.395	0/1:180:87,77,15:87:3073:77,15:2709,420:-190.003,0,-49.0339,-186.982,-42.9702,-254.675	0/1:294:158,98,36:158:5572:98,36:3516,998:-234.118,0,-182.879,-211.813,-142.473,-413.304	1/2:405:156,147,100:156:5509:147,100:5225,2802:-419.097,-48.5973,-151.273,-270.615,0,-387.4	0/1:546:289,149,104:289:10159:149,104:5315,2882:-337.583,0,-174.009,-223.565,-17.7727,-411.066	0/1:373:197,118,54:197:6932:118,54:4222,1488:-278.429,0,-243.14,-234.51,-175.397,-496.863	0/1:364:215,104,37:215:7581:104,37:3705,1037:-231.615,0,-246.767,-223.7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chr04	8787487	.	AAG	AAA	79468.1	PASS	AB=0.394783;ABP=279.467;AC=142;AF=0.755319;AN=188;AO=3961;CIGAR=2M1X;DP=5733;DPB=5733.33;DPRA=8.28696;EPP=8604.21;EPPR=3826.97;GTI=3;LEN=1;MEANALT=1.08696;MQM=59.9662;MQMR=59.9824;NS=94;NUMALT=1;ODDS=0.747393;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=16;PQR=0;PRO=0;QA=138752;QR=61783;RO=1761;RPL=0;RPP=8604.21;RPPR=3826.97;RPR=3961;RUN=1;SAF=3961;SAP=8604.21;SAR=0;SRF=1761;SRP=3826.97;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:22:16,6:16:559:6:216:-13.1679,0,-44.0148	1/1:36:0,36:0:0:36:1262:-113.878,-10.8371,0	1/1:78:0,78:0:0:78:2747:-247.469,-23.4803,0	1/1:98:0,98:0:0:98:3410:-307.109,-29.5009,0	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:33:0,33:0:0:33:1173:-105.876,-9.93399,0	0/1:63:42,21:42:1476:21:718:-45.9691,0,-114.168	1/1:100:0,99:0:0:99:3495:-313.771,-29.802,0	0/1:75:51,24:51:1780:24:826:-52.0744,0,-137.904	1/1:38:0,34:0:0:34:1204:-108.307,-10.235,0	1/1:63:0,63:0:0:63:2200:-198.259,-18.9649,0	1/1:91:0,91:0:0:91:3230:-290.92,-27.3937,0	1/1:78:2,76:2:72:76:2683:-234.875,-16.6436,0	1/1:105:0,105:0:0:105:3727:-335.628,-31.6082,0	0/1:46:26,20:26:934:20:720:-51.2814,0,-70.5319	0/1:88:45,43:45:1567:43:1483:-107.267,0,-114.828	1/1:42:0,42:0:0:42:1470:-132.59,-12.6433,0	0/1:45:26,19:26:912:19:665:-46.6264,0,-68.8478	0/1:56:29,27:29:1025:27:923:-66.5175,0,-75.7049	0/1:95:61,34:61:2159:34:1205:-80.156,0,-165.979	0/1:103:61,42:61:2148:42:1441:-98.9691,0,-162.58	0/1:53:37,16:37:1294:16:576:-36.2204,0,-100.787	0/1:47:31,16:31:1083:16:546:-35.3109,0,-83.6291	1/1:45:2,43:2:72:43:1487:-127.28,-6.70963,0	1/1:42:0,42:0:0:42:1504:-135.655,-12.6433,0	0/1:101:56,45:56:1958:45:1578:-111.902,0,-146.09	0/1:121:71,50:71:2470:50:1765:-122.707,0,-186.129	1/1:27:0,27:0:0:27:938:-84.7293,-8.12781,0	0/1:109:62,47:62:2166:47:1649:-115.882,0,-162.392	0/1:62:43,19:43:1512:19:635:-38.7962,0,-117.709	1/1:64:0,64:0:0:64:2272:-204.743,-19.2659,0	0/0:11:11,0:11:377:0:0:0,-3.31133,-34.2595	0/1:23:11,12:11:387:12:432:-32.2975,0,-28.2431	1/1:9:0,9:0:0:9:320:-29.139,-2.70927,0	1/1:10:0,10:0:0:10:330:-30.0171,-3.0103,0	0/1:47:25,22:25:860:22:732:-52.036,0,-63.5635	1/1:126:0,126:0:0:126:4449:-400.578,-37.9298,0	1/1:49:0,49:0:0:49:1722:-155.261,-14.7505,0	0/1:86:53,33:53:1879:33:1188:-81.34,0,-143.5	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9448	0/1:59:35,23:35:1252:23:790:-53.5936,0,-95.166	1/1:52:0,52:0:0:52:1829:-164.858,-15.6536,0	0/1:95:61,34:61:2150:34:1203:-79.9764,0,-165.169	0/1:63:36,27:36:1261:27:949:-66.7579,0,-94.8261	1/1:42:1,41:1:36:41:1389:-121.697,-9.04499,0	0/1:70:30,40:30:1063:40:1338:-99.632,0,-74.9091	0/1:74:48,26:48:1665:26:898:-58.853,0,-127.859	0/1:102:49,52:49:1743:52:1837:-134.953,0,-126.497	1/1:35:1,34:1:34:34:1186:-103.642,-7.13714,0	1/1:53:0,53:0:0:53:1892:-170.558,-15.9546,0	1/1:38:0,38:0:0:38:1338:-120.716,-11.4391,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:95:55,40:55:1956:40:1368:-94.8107,0,-147.718	0/1:52:33,19:33:1130:19:654:-43.524,0,-86.3473	1/1:19:0,19:0:0:19:635:-57.46,-5.71957,0	1/1:82:0,82:0:0:82:2902:-261.414,-24.6845,0	1/1:23:0,23:0:0:23:794:-71.7687,-6.92369,0	1/1:11:0,10:0:0:10:352:-31.6591,-3.0103,0	0/1:10:3,7:3:92:7:252:-20.0187,0,-5.57425	0/1:58:35,23:35:1216:23:812:-55.8094,0,-92.2813	1/1:101:1,99:1:36:99:3432:-305.553,-26.7996,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:106:48,58:48:1667:58:2024:-150.517,0,-118.404	1/1:59:1,58:1:36:58:1979:-174.774,-14.1625,0	0/1:38:28,10:28:987:10:360:-21.3052,0,-77.7044	1/1:46:0,46:0:0:46:1602:-144.406,-13.8474,0	0/1:87:63,24:63:2183:24:819:-47.8287,0,-170.547	0/1:112:88,24:88:3081:24:837:-41.9303,0,-243.806	1/1:73:0,73:0:0:73:2549:-229.654,-21.9752,0	1/1:33:0,33:0:0:33:1177:-106.229,-9.93399,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	0/1:16:7,9:7:237:9:320:-24.3259,0,-16.8426	1/1:87:0,87:0:0:87:3049:-274.626,-26.1896,0	0/1:59:38,21:38:1336:21:741:-49.2508,0,-102.774	1/1:74:0,73:0:0:73:2526:-227.303,-21.9752,0	1/1:71:0,71:0:0:71:2512:-226.33,-21.3731,0	0/1:67:36,31:36:1263:31:1035:-73.2756,0,-93.8031	0/1:88:46,42:46:1620:42:1496:-108.443,0,-119.599	0/1:9:6,3:6:206:3:108:-7.3659,0,-16.166	1/1:69:0,69:0:0:69:2440:-219.851,-20.7711,0	1/1:50:0,49:0:0:49:1700:-152.904,-14.7505,0	1/1:83:0,83:0:0:83:2908:-261.952,-24.9855,0	1/1:71:0,71:0:0:71:2496:-224.887,-21.3731,0	1/1:65:0,65:0:0:65:2309:-208.068,-19.567,0	0/1:29:17,12:17:599:12:428:-30.1289,0,-45.5086	1/1:96:0,96:0:0:96:3338:-300.634,-28.8989,0	0/1:29:14,15:14:471:15:536:-39.8449,0,-33.9809	0/1:75:48,27:48:1701:27:972:-65.2207,0,-130.798	1/1:61:0,61:0:0:61:2157:-194.396,-18.3628,0	1/1:75:0,75:0:0:75:2609:-235.053,-22.5773,0	0/1:159:105,54:105:3707:54:1917:-124.942,0,-285.971	0/1:81:63,18:63:2225:18:614:-31.1935,0,-176.131	1/1:63:0,63:0:0:63:2147:-193.487,-18.9649,0	1/1:94:0,94:0:0:94:3296:-296.857,-28.2968,0
chr04	8787522	.	C	T	30105.7	PASS	AB=0.596541;ABP=232.352;AC=46;AF=0.244681;AN=188;AO=1713;CIGAR=1X;DP=5701;DPB=5701;DPRA=1.20402;EPP=3705.39;EPPR=8636.79;GTI=1;LEN=1;MEANALT=1.05882;MQM=59.9819;MQMR=59.9784;NS=94;NUMALT=1;ODDS=1.31324;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61116;QR=141459;RO=3984;RPL=1710;RPP=3696.73;RPPR=8619.45;RPR=3;RUN=1;SAF=1712;SAP=3714.06;SAR=1;SRF=3982;SRP=8636.79;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:8,15:8:288:15:536:-41.6511,0,-19.3437	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/0:79:79,0:79:2815:0:0:0,-23.7814,-253.59	0/0:96:96,0:96:3399:0:0:0,-28.8989,-306.125	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/1:63:21,42:21:743:42:1503:-116.599,0,-48.2284	0/0:99:98,1:98:3486:1:32:0,-26.6027,-310.752	0/1:74:25,48:25:896:48:1705:-131.398,0,-58.6254	0/0:39:39,0:39:1384:0:0:0,-11.7402,-124.859	0/0:68:68,0:68:2405:0:0:0,-20.47,-216.703	0/0:96:96,0:96:3370:0:0:0,-28.8989,-303.445	0/0:79:78,1:78:2784:1:36:0,-20.1831,-247.2	0/0:105:105,0:105:3712:0:0:0,-31.6081,-334.283	0/1:47:21,26:21:756:26:936:-70.4111,0,-54.2188	0/1:84:41,43:41:1467:43:1535:-113.156,0,-107.039	0/0:42:42,0:42:1448:0:0:0,-12.6433,-130.609	0/1:45:19,26:19:667:26:932:-70.6525,0,-46.8083	0/1:57:28,29:28:995:29:1031:-75.9439,0,-72.7053	0/1:94:34,60:34:1216:60:2156:-166.01,0,-81.4497	0/1:99:42,57:42:1491:57:2034:-153.529,0,-104.682	0/1:54:17,37:17:603:37:1297:-100.766,0,-38.3439	0/1:48:17,31:17:603:31:1112:-85.9419,0,-40.1501	0/0:44:42,2:42:1485:2:72:0,-6.4086,-127.106	0/0:43:43,0:43:1532:0:0:0,-12.9443,-138.173	0/1:100:45,55:45:1589:55:1953:-145.941,0,-113.195	0/1:120:53,67:53:1904:67:2378:-178.153,0,-135.514	0/0:28:28,0:28:989:0:0:0,-8.42884,-89.322	0/1:106:47,59:47:1664:59:2120:-159.151,0,-118.131	0/1:60:18,42:18:644:42:1508:-117.953,0,-40.2288	0/0:64:64,0:64:2246:0:0:0,-19.2659,-202.401	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	0/1:23:12,11:12:432:11:387:-28.2422,0,-32.2975	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.8951	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7361	0/1:46:22,24:22:784:24:850:-62.9709,0,-57.0365	0/0:127:127,0:127:4506:0:0:0,-38.2308,-405.709	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/1:88:34,54:34:1220:54:1936:-148.026,0,-83.6162	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:58:24,34:24:847:34:1212:-91.9266,0,-59.089	0/0:51:51,0:51:1786:0:0:0,-15.3525,-160.99	0/1:95:35,60:35:1252:60:2151:-165.259,0,-84.3872	0/1:62:26,36:26:912:36:1287:-97.4689,0,-63.7292	0/0:42:42,0:42:1468:0:0:0,-12.6433,-132.412	0/1:69:39,30:39:1400:30:1063:-75.2099,0,-105.528	0/1:73:26,47:26:904:47:1680:-129.512,0,-59.6967	0/1:104:54,48:54:1905:48:1728:-124.74,0,-140.661	0/0:35:35,0:35:1247:0:0:0,-10.536,-112.534	0/0:54:53,1:53:1896:1:36:0,-12.6573,-167.32	0/0:39:39,0:39:1387:0:0:0,-11.7402,-125.128	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:95:40,55:40:1409:55:1972:-149.157,0,-98.5074	0/1:52:18,34:18:644:34:1203:-92.9215,0,-42.637	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:81:81,0:81:2873:0:0:0,-24.3834,-258.804	0/0:24:24,0:24:838:0:0:0,-7.22472,-75.7345	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/1:56:23,33:23:824:33:1184:-90.0106,0,-57.6256	0/0:101:100,1:100:3558:1:36:0,-26.8058,-316.828	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:103:57,46:57:2029:46:1632:-116.162,0,-151.875	0/0:58:57,1:57:2025:1:36:0,-13.8615,-178.923	0/1:37:10,27:10:351:27:956:-75.2176,0,-20.7886	0/0:43:43,0:43:1511:0:0:0,-12.9443,-136.277	0/1:84:24,60:24:828:60:2152:-168.661,0,-49.5467	0/1:109:23,86:23:828:86:3059:-242.726,0,-42.0318	0/0:71:71,0:71:2539:0:0:0,-21.3731,-228.76	0/0:33:32,0:32:1143:0:0:0,-9.63296,-102.974	0/0:42:42,0:42:1484:0:0:0,-12.6433,-133.852	0/1:16:9,7:9:324:7:239:-17.0262,0,-24.6894	0/0:90:90,0:90:3211:0:0:0,-27.0927,-289.205	0/1:57:20,37:20:711:37:1319:-101.839,0,-47.1569	0/0:79:79,0:79:2811:0:0:0,-23.7814,-253.23	0/0:70:69,1:69:2446:1:36:0,-17.4738,-216.796	0/1:64:30,34:30:1072:34:1220:-90.8409,0,-77.5265	0/1:84:40,44:40:1410:44:1584:-117.565,0,-101.909	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/0:70:70,0:70:2483:0:0:0,-21.0721,-223.724	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:79:79,0:79:2827:0:0:0,-23.7814,-254.668	0/0:69:69,0:69:2463:0:0:0,-20.7711,-221.924	0/0:63:63,0:63:2232:0:0:0,-18.9649,-201.142	0/1:28:12,16:12:432:16:572:-43.3846,0,-30.7924	0/0:99:99,0:99:3494:0:0:0,-29.802,-314.669	0/1:29:15,14:15:540:14:496:-36.2444,0,-40.2067	0/1:73:28,45:28:999:45:1611:-123.304,0,-68.2493	0/0:62:62,0:62:2199:0:0:0,-18.6639,-198.172	0/0:74:74,0:74:2621:0:0:0,-22.2762,-236.137	0/1:151:52,99:52:1845:99:3500:-269.754,0,-120.873	0/1:83:20,63:20:711:63:2247:-177.507,0,-39.3302	0/0:63:63,0:63:2246:0:0:0,-18.9649,-202.402	0/0:94:94,0:94:3343:0:0:0,-28.2968,-301.086
chr04	9371409	.	TT	GC	39774.3	PASS	AB=0.499637;ABP=3.0166;AC=34;AF=0.180851;AN=188;AO=2966;CIGAR=2X;DP=23436;DPB=23436;DPRA=1.42556;EPP=6313.97;EPPR=43444.2;GTI=2;LEN=2;MEANALT=1.24528;MQM=44.6254;MQMR=56.9197;NS=94;NUMALT=1;ODDS=7.84055;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105117;QR=717399;RO=20447;RPL=15;RPP=6313.97;RPPR=43444.2;RPR=2951;RUN=1;SAF=0;SAP=6443.6;SAR=2966;SRF=0;SRP=44403.1;SRR=20447;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:37,14:37:1309:14:479:-27.8591,0,-102.758	0/0:138:138,0:138:4845:0:0:0,-41.5421,-436.205	0/1:140:80,60:80:2780:60:2080:-143.021,0,-208.293	0/0:218:216,1:216:7603:1:36:0,-62.0828,-680.407	0/1:104:34,70:34:1177:70:2502:-192.899,0,-74.9234	0/1:16:11,5:11:386:5:178:-11.4689,0,-30.2591	0/0:146:146,0:146:5172:0:0:0,-43.9504,-465.622	0/1:163:86,77:86:3006:77:2721:-193.886,0,-221.697	0/0:102:102,0:102:3583:0:0:0,-30.7051,-322.657	0/0:86:86,0:86:3022:0:0:0,-25.8886,-271.836	0/0:575:574,0:574:20102:0:0:0,-172.791,-1808.21	0/1:92:50,42:50:1759:42:1441:-101.351,0,-130.896	0/0:66:66,0:66:2317:0:0:0,-19.868,-208.788	0/0:99:99,0:99:3500:0:0:0,-29.802,-315.21	0/0:60:60,0:60:2137:0:0:0,-18.0618,-192.592	0/1:96:52,44:52:1819:44:1560:-109.464,0,-135.088	0/0:93:92,0:92:3201:0:0:0,-27.6948,-287.953	0/0:72:72,0:72:2543:0:0:0,-21.6742,-229.12	0/0:199:199,0:199:6984:0:0:0,-59.905,-628.632	0/1:299:112,186:112:3987:186:6591:-500.549,0,-268.952	0/0:171:171,0:171:6071:0:0:0,-51.4761,-546.472	0/0:147:147,0:147:5099:0:0:0,-44.2514,-395.195	0/0:55:55,0:55:1917:0:0:0,-16.5566,-172.801	0/0:107:107,0:107:3803:0:0:0,-32.2102,-342.465	0/1:64:30,34:30:1024:34:1213:-89.148,0,-73.0891	0/1:417:204,213:204:7119:213:7559:-416.923,0,-427.856	0/0:248:247,1:247:8688:1:36:0,-71.069,-778.308	0/0:40:40,0:40:1430:0:0:0,-12.0412,-128.997	0/1:419:163,256:163:5777:256:9111:-523.061,0,-317.697	0/1:127:61,66:61:2113:66:2338:-170.619,0,-152.203	0/0:132:132,0:132:4653:0:0:0,-39.736,-418.078	0/0:431:421,9:421:14651:9:324:0,-100.612,-1289.12	0/0:696:665,31:665:23277:31:1108:0,-110.492,-1994.07	0/0:2196:2195,0:2195:76878:0:0:0,-660.761,-6915.56	0/0:1054:1040,13:1040:36374:13:466:0,-275.299,-3230.41	0/0:1460:1457,2:1457:51054:2:70:0,-432.9,-4586.24	0/1:216:111,105:111:3925:105:3698:-201.475,0,-237.308	0/1:309:142,167:142:5001:167:5902:-434.578,0,-356.117	0/0:449:448,0:448:15677:0:0:0,-134.861,-1409.16	0/0:374:363,11:363:12675:11:392:0,-77.075,-1104.95	0/1:130:61,69:61:2141:69:2450:-178.167,0,-153.822	0/1:166:128,38:128:4496:38:1360:-72.1166,0,-354.837	0/0:113:113,0:113:3978:0:0:0,-34.0164,-357.893	0/0:67:67,0:67:2382:0:0:0,-20.169,-212.497	0/0:81:81,0:81:2831:0:0:0,-24.3834,-255.026	0/1:91:46,45:46:1602:45:1610:-88.5268,0,-97.1536	0/0:98:98,0:98:3434:0:0:0,-29.5009,-308.49	0/0:229:225,4:225:7857:4:144:0,-55.8028,-691.733	0/0:144:144,0:144:5065:0:0:0,-43.3483,-455.365	0/0:144:143,1:143:5038:1:36:0,-39.7569,-449.977	0/1:201:89,112:89:3123:112:4008:-223.85,0,-180.849	0/0:538:506,32:506:17793:32:1147:0,-58.84,-1497.57	0/0:150:149,0:149:5275:0:0:0,-44.8535,-474.605	0/0:53:53,0:53:1875:0:0:0,-15.9546,-145.47	0/0:1323:1317,4:1317:46071:4:144:0,-384.778,-4131.27	0/0:134:134,0:134:4687:0:0:0,-40.338,-421.8	0/0:47:45,0:45:1564:0:0:0,-13.5463,-140.686	0/0:816:804,12:804:28055:12:430:0,-214.927,-2136.93	0/0:437:418,18:418:14776:18:646:0,-85.7286,-1099.63	0/1:37:13,24:13:456:24:856:-65.9755,0,-30.2343	0/1:163:67,96:67:2368:96:3406:-255.972,0,-164.302	0/0:395:395,0:395:13930:0:0:0,-118.907,-1252.93	0/0:189:187,2:187:6515:2:72:0,-51.5346,-499.831	0/1:259:109,148:109:3823:148:5185:-387.179,0,-265.43	0/0:77:72,5:72:2516:5:180:0,-6.68149,-210.191	0/1:141:49,91:49:1731:91:3249:-249.428,0,-113.567	0/1:195:68,127:68:2376:127:4478:-342.268,0,-155.394	0/1:61:21,40:21:741:40:1414:-108.739,0,-48.6488	0/0:261:237,23:237:8388:23:828:0,-4.24604,-680.545	0/0:68:68,0:68:2414:0:0:0,-20.47,-217.515	0/1:89:46,41:46:1631:41:1467:-77.4717,0,-100.208	0/0:499:478,21:478:16722:21:754:0,-82.2834,-1436.68	0/1:106:48,58:48:1712:58:2064:-151.919,0,-122.438	0/1:59:28,31:28:997:31:1114:-82.2043,0,-72.2831	0/1:123:64,59:64:2213:59:2088:-148.855,0,-162.373	0/0:190:190,0:190:6712:0:0:0,-57.1957,-604.158	0/1:194:87,107:87:3033:107:3777:-279.115,0,-214.79	0/1:127:49,78:49:1668:78:2775:-208.671,0,-112.168	0/0:623:603,20:603:21128:20:698:0,-125.195,-1838.66	0/0:125:125,0:125:4438:0:0:0,-37.6287,-399.591	0/0:129:129,0:129:4465:0:0:0,-38.8329,-402.024	0/0:300:300,0:300:10561:0:0:0,-90.309,-950.396	0/0:93:93,0:93:3269:0:0:0,-27.9958,-294.429	0/0:86:86,0:86:3066:0:0:0,-25.8886,-276.168	0/0:76:76,0:76:2703:0:0:0,-22.8783,-243.512	0/1:139:61,78:61:2164:78:2780:-207.319,0,-153.172	0/0:39:39,0:39:1369:0:0:0,-11.7402,-123.506	0/1:97:57,39:57:2023:39:1382:-93.3233,0,-153.082	0/0:74:74,0:74:2600:0:0:0,-22.2762,-234.245	0/0:755:754,0:754:26555:0:0:0,-226.977,-2388.58	0/1:549:470,79:470:16538:79:2776:-82.6913,0,-1322.81	0/1:74:18,56:18:648:56:1958:-153.502,0,-36.3757	0/0:61:60,1:60:2100:1:36:0,-14.7714,-185.048	0/0:94:94,0:94:3345:0:0:0,-28.2968,-301.266
chr04	9541130	.	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chr04	9541169	.	C	T	259963	PASS	AB=0.440585;ABP=353.426;AC=144;AF=0.765957;AN=188;AO=12822;CIGAR=1X;DP=19230;DPB=19230;DPRA=0;EPP=27845.6;EPPR=13915.6;GTI=5;LEN=1;MEANALT=1.01064;MQM=59.9868;MQMR=59.9964;NS=94;NUMALT=1;ODDS=0.697583;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=458490;QR=229041;RO=6407;RPL=12822;RPP=27845.6;RPPR=13915.6;RPR=0;RUN=1;SAF=0;SAP=27845.6;SAR=12822;SRF=0;SRP=13915.6;SRR=6407;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:23,36:23:809:36:1277:-97.4703,0,-55.3675	1/1:92:0,92:0:0:92:3289:-296.228,-27.6948,0	1/1:225:1,224:1:36:224:8033:-719.385,-64.1335,0	1/1:232:1,231:1:36:231:8278:-741.428,-66.2407,0	1/1:77:1,76:1:36:76:2713:-240.816,-19.581,0	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	0/1:122:46,76:46:1643:76:2731:-209.307,0,-111.432	1/1:164:0,164:0:0:164:5884:-529.669,-49.3689,0	0/1:107:47,60:47:1680:60:2148:-161.377,0,-119.276	1/1:85:0,85:0:0:85:3037:-273.559,-25.5876,0	1/1:199:0,199:0:0:199:7099:-638.969,-59.905,0	1/1:111:0,111:0:0:111:3973:-357.757,-33.4143,0	1/1:72:0,72:0:0:72:2588:-233.168,-21.6742,0	1/1:55:0,55:0:0:55:1980:-178.474,-16.5567,0	0/1:36:15,21:15:540:21:756:-57.5301,0,-38.0995	0/1:73:33,40:33:1184:40:1436:-107.562,0,-84.8931	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	0/1:11:7,4:7:248:4:144:-10.0023,0,-19.3529	0/1:142:80,62:80:2868:62:2216:-156.958,0,-215.611	0/1:162:75,87:75:2700:87:3132:-233.338,0,-194.477	0/1:146:74,72:74:2660:72:2580:-188.499,0,-195.695	0/1:99:59,40:59:2112:40:1425:-98.7456,0,-160.547	0/1:139:87,52:87:3108:52:1864:-126.196,0,-238.104	1/1:119:5,114:5:176:114:4083:-351.469,-19.6376,0	1/1:140:0,140:0:0:140:5017:-451.674,-42.1442,0	0/1:191:106,85:106:3761:85:3052:-217.412,0,-281.194	0/1:324:174,150:174:6224:150:5357:-384.728,0,-462.723	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:313:146,167:146:5224:167:5988:-444.801,0,-376.076	0/1:123:54,69:54:1936:69:2468:-185.347,0,-137.49	1/1:127:0,127:0:0:127:4519:-406.875,-38.2308,0	0/1:924:550,374:550:19679:374:13359:-923.882,0,-1492.48	0/1:993:541,452:541:19342:452:16160:-1155.15,0,-1441.24	1/1:549:0,549:0:0:549:19600:-1763.52,-165.265,0	1/1:845:3,842:3:108:842:30143:-2701.88,-244.295,0	0/1:2085:1109,976:1109:39625:976:34863:-2508.91,0,-2937.3	1/1:161:0,161:0:0:161:5744:-517.076,-48.4658,0	1/1:91:0,91:0:0:91:3262:-293.8,-27.3937,0	0/1:259:128,131:128:4583:131:4694:-344.653,0,-334.667	0/1:631:518,113:518:18546:113:4037:-173.567,0,-1478.76	0/1:94:37,57:37:1313:57:2048:-156.295,0,-90.1729	1/1:114:0,114:0:0:114:4077:-367.116,-34.3174,0	0/1:178:92,86:92:3280:86:3065:-222.495,0,-241.838	0/1:29:14,15:14:500:15:536:-39.844,0,-36.6063	1/1:76:0,76:0:0:76:2732:-246.122,-22.8783,0	0/1:132:61,71:61:2192:71:2515:-186.864,0,-157.809	0/1:105:49,56:49:1756:56:2012:-149.745,0,-126.716	0/1:146:54,92:54:1940:92:3293:-252.639,0,-130.926	1/1:65:0,65:0:0:65:2325:-209.509,-19.567,0	1/1:166:0,166:0:0:166:5960:-536.505,-49.971,0	1/1:159:0,159:0:0:159:5637:-507.451,-47.8638,0	1/1:260:1,259:1:36:259:9277:-831.286,-74.6695,0	0/1:142:61,81:61:2158:81:2900:-218.49,0,-151.738	0/1:94:40,54:40:1440:54:1936:-146.22,0,-101.601	1/1:194:1,193:1:36:193:6900:-617.469,-54.8015,0	1/1:129:0,129:0:0:129:4616:-415.604,-38.8329,0	1/1:71:0,71:0:0:71:2532:-228.131,-21.3731,0	1/1:556:0,556:0:0:556:19864:-1787.28,-167.373,0	0/1:526:273,253:273:9758:253:9068:-657.751,0,-719.824	0/1:101:57,44:57:2029:44:1567:-110.29,0,-152.477	1/1:82:0,82:0:0:82:2944:-265.193,-24.6845,0	1/1:320:0,320:0:0:320:11484:-1033.43,-96.3296,0	0/1:80:13,67:13:464:67:2397:-191.904,0,-18.0151	1/1:154:0,154:0:0:154:5487:-493.955,-46.3586,0	0/1:63:33,30:33:1184:30:1067:-77.3763,0,-87.9034	1/1:100:0,100:0:0:100:3569:-321.417,-30.103,0	0/1:162:82,80:82:2936:80:2860:-208.869,0,-215.707	0/1:214:135,79:135:4832:79:2799:-187.727,0,-370.614	1/1:242:0,242:0:0:242:8664:-779.751,-72.8493,0	1/1:85:0,85:0:0:85:3044:-274.19,-25.5876,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:683:360,323:360:12869:323:11546:-833.405,0,-952.424	1/1:136:0,136:0:0:136:4808:-432.876,-40.9401,0	0/1:105:63,42:63:2221:42:1505:-104.136,0,-168.545	1/1:198:0,198:0:0:198:7078:-637.078,-59.6039,0	1/1:139:0,139:0:0:139:4976:-447.989,-41.8432,0	0/1:148:67,81:67:2408:81:2889:-215.693,0,-172.424	0/1:67:34,33:34:1205:33:1176:-85.9782,0,-88.5849	0/1:800:544,256:544:19481:256:9072:-575.313,0,-1512	1/1:128:0,128:0:0:128:4580:-412.364,-38.5318,0	1/1:119:0,119:0:0:119:4246:-382.317,-35.8226,0	1/1:181:0,181:0:0:181:6468:-582.205,-54.4864,0	1/1:50:0,50:0:0:50:1788:-161.203,-15.0515,0	1/1:81:1,80:1:36:80:2880:-255.837,-20.7852,0	0/1:30:18,12:18:640:12:432:-30.1903,0,-48.8984	1/1:102:0,102:0:0:102:3650:-328.704,-30.7051,0	0/1:23:5,18:5:180:18:639:-50.9154,0,-9.62837	0/1:73:36,37:36:1292:37:1328:-97.847,0,-94.6086	1/1:73:0,73:0:0:73:2613:-235.417,-21.9752,0	1/1:211:1,210:1:36:210:7540:-675.039,-59.9191,0	0/1:409:339,69:339:12067:69:2453:-97.8435,0,-962.705	0/1:85:53,32:53:1888:32:1139:-77.23,0,-144.611	1/1:45:0,45:0:0:45:1620:-146.09,-13.5464,0	1/1:122:0,122:0:0:122:4372:-393.653,-36.7257,0
chr04	9857210	.	A	T	162064	PASS	AB=0.448984;ABP=120.881;AC=143;AF=0.760638;AN=188;AO=7763;CIGAR=1X;DP=10649;DPB=10649;DPRA=0;EPP=16860.2;EPPR=6248.16;GTI=1;LEN=1;MEANALT=1.08511;MQM=52.3384;MQMR=59.6318;NS=94;NUMALT=1;ODDS=0.251182;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=277493;QR=102861;RO=2876;RPL=0;RPP=16860.2;RPPR=6248.16;RPR=7763;RUN=1;SAF=7763;SAP=16860.2;SAR=0;SRF=2876;SRP=6248.16;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:13,14:13:468:14:485:-35.6191,0,-34.3318	1/1:174:0,174:0:0:174:6215:-553.745,-52.3792,0	1/1:150:0,150:0:0:150:5344:-478.768,-45.1545,0	1/1:250:0,250:0:0:250:8939:-800.709,-75.2575,0	1/1:126:0,126:0:0:126:4520:-405.886,-37.9298,0	1/1:122:0,122:0:0:122:4363:-391.865,-36.7257,0	0/1:97:51,46:51:1824:46:1640:-118.11,0,-135.229	1/1:260:0,260:0:0:260:9290:-831.234,-78.2678,0	0/1:104:57,47:57:2044:47:1679:-119.328,0,-152.925	1/1:153:0,153:0:0:153:5469:-490.709,-46.0576,0	1/1:80:0,80:0:0:80:2863:-256.71,-24.0824,0	1/1:71:0,70:0:0:70:2503:-223.681,-21.0721,0	1/1:78:0,78:0:0:78:2782:-249.537,-23.4803,0	1/1:84:0,84:0:0:84:3016:-270.53,-25.2865,0	0/1:83:45,38:45:1620:38:1368:-98.1692,0,-121.096	0/1:87:45,42:45:1616:42:1504:-109.112,0,-119.453	1/1:94:0,94:0:0:94:3380:-303.205,-28.2968,0	0/1:71:33,38:33:1188:38:1364:-101.018,0,-85.8555	0/1:63:32,31:32:1148:31:1112:-80.5281,0,-84.6649	0/1:290:188,102:188:6707:102:3641:-239.677,0,-516.159	0/1:134:87,47:87:3099:47:1679:-110.202,0,-238.56	0/1:80:63,17:63:2241:17:608:-30.8518,0,-177.86	0/1:46:17,29:17:612:29:1036:-78.3331,0,-41.5598	0/1:108:13,95:13:468:95:3412:-273.967,0,-9.94377	1/1:58:0,58:0:0:58:2076:-186.435,-17.4597,0	0/1:378:214,164:214:7648:164:5853:-410.658,0,-574.526	0/1:199:113,86:113:4045:86:3070:-216.011,0,-304.074	1/1:71:0,71:0:0:71:2537:-227.981,-21.3731,0	0/1:171:88,83:88:3153:83:2950:-213.616,0,-232.503	0/1:208:104,104:104:3721:104:3709:-270.088,0,-272.446	1/1:93:0,93:0:0:93:3298:-295.844,-27.9958,0	0/1:6:4,2:4:144:2:72:-5.02085,0,-11.5074	0/1:18:9,9:9:324:9:324:-24.0455,0,-24.0827	1/1:9:0,9:0:0:9:324:-29.4317,-2.70927,0	1/1:7:0,7:0:0:7:252:-22.9711,-2.10721,0	0/1:9:3,6:3:108:6:201:-15.6659,0,-7.3659	1/1:248:0,248:0:0:248:8871:-796.058,-74.6554,0	1/1:234:0,234:0:0:234:8320:-745.926,-70.441,0	0/1:81:50,31:50:1796:31:1112:-75.5774,0,-137.503	0/1:4:3,1:3:108:1:36:-2.38905,0,-8.85993	0/1:179:87,91:87:3113:91:3257:-238.306,0,-226.308	1/1:55:0,55:0:0:55:1980:-177.651,-16.5567,0	0/1:170:95,75:95:3401:75:2673:-188.721,0,-255.002	0/1:91:47,44:47:1677:44:1576:-113.973,0,-123.784	1/1:94:0,94:0:0:94:3364:-301.807,-28.2968,0	0/1:140:56,84:56:2001:84:2999:-227.235,0,-138.211	0/1:180:100,80:100:3577:80:2864:-202.693,0,-267.897	0/1:214:117,97:117:4200:97:3454:-245.345,0,-313.734	1/1:162:0,162:0:0:162:5772:-517.475,-48.7669,0	1/1:147:0,147:0:0:147:5272:-473.136,-44.2514,0	1/1:132:0,132:0:0:132:4710:-422.53,-39.736,0	1/1:24:0,24:0:0:24:856:-77.1562,-7.22472,0	0/1:172:92,77:92:3285:77:2756:-194.768,0,-244.491	0/1:66:30,35:30:1076:35:1256:-93.1043,0,-77.2128	1/1:14:0,14:0:0:14:500:-45.2206,-4.21442,0	1/1:124:0,124:0:0:124:4414:-396.526,-37.3277,0	1/1:59:2,57:2:72:57:2037:-176.017,-10.924,0	1/1:18:0,18:0:0:18:636:-57.4202,-5.41854,0	0/1:30:19,11:19:680:11:396:-26.7211,0,-52.4983	0/1:78:43,35:43:1548:35:1248:-88.6006,0,-116.119	1/1:123:0,123:0:0:123:4428:-397.251,-37.0267,0	1/1:4:0,4:0:0:4:144:-13.2883,-1.20412,0	0/1:266:168,98:168:5946:98:3509:-234.508,0,-455.151	1/1:234:8,226:8:288:226:8081:-697.13,-44.1844,0	0/1:163:84,79:84:2990:79:2821:-204.413,0,-220.251	1/1:59:0,59:0:0:59:2105:-188.558,-17.7608,0	0/1:181:106,75:106:3793:75:2675:-186.021,0,-286.695	0/1:110:77,33:77:2745:33:1175:-72.7501,0,-214.161	1/1:18:0,18:0:0:18:640:-57.843,-5.41854,0	1/1:106:0,106:0:0:106:3768:-337.225,-31.9092,0	1/1:105:0,104:0:0:104:3744:-335.123,-31.3071,0	0/1:30:19,11:19:680:11:392:-26.502,0,-52.4983	1/1:76:0,76:0:0:76:2732:-244.958,-22.8783,0	0/1:66:32,34:32:1152:34:1216:-89.5739,0,-84.1213	1/1:138:0,138:0:0:138:4944:-443.888,-41.5421,0	1/1:96:0,96:0:0:96:3425:-306.548,-28.8989,0	0/1:186:101,85:101:3621:85:3031:-215.726,0,-270.066	0/1:127:70,57:70:2505:57:2005:-141.074,0,-187.445	0/1:10:7,3:7:237:3:108:-7.03954,0,-18.6405	1/1:125:0,125:0:0:125:4454:-399.339,-37.6288,0	1/1:113:0,113:0:0:113:4040:-362.487,-34.0164,0	1/1:289:0,289:0:0:289:10336:-926.252,-86.9977,0	1/1:136:0,135:0:0:135:4835:-433.792,-40.6391,0	1/1:54:0,54:0:0:54:1940:-174.029,-16.2556,0	0/1:117:68,49:68:2436:49:1756:-122.786,0,-184.268	1/1:164:0,164:0:0:164:5895:-527.916,-49.3689,0	0/1:54:27,27:27:972:27:972:-71.3216,0,-71.5423	0/1:87:54,33:54:1944:33:1184:-80.1339,0,-149.008	1/1:111:0,111:0:0:111:3968:-354.949,-33.4143,0	1/1:42:0,42:0:0:42:1508:-135.496,-12.6433,0	0/1:116:62,53:62:2216:53:1899:-135.525,0,-164.716	0/1:117:73,43:73:2624:43:1544:-103.274,0,-200.883	1/1:92:0,92:0:0:92:3296:-295.96,-27.6948,0	1/1:159:0,159:0:0:159:5686:-509.974,-47.8638,0
chr04	10093813	.	G	A	178328	PASS	AB=0.4758;ABP=29.7052;AC=143;AF=0.760638;AN=188;AO=8404;CIGAR=1X;DP=11177;DPB=11177;DPRA=0;EPP=18243.4;EPPR=6011.47;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.9719;MQMR=60;NS=94;NUMALT=1;ODDS=5.35657;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=301068;QR=98522;RO=2767;RPL=8403;RPP=18243.4;RPPR=6011.47;RPR=1;RUN=1;SAF=8404;SAP=18252.1;SAR=0;SRF=2767;SRP=6011.47;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:41:25,16:25:888:16:576:-39.8328,0,-67.8968	1/1:170:0,170:0:0:170:6096:-548.73,-51.1751,0	1/1:273:1,272:1:36:272:9739:-872.858,-78.5829,0	1/1:222:0,222:0:0:222:7953:-715.791,-66.8287,0	1/1:67:4,63:4:140:63:2268:-191.437,-7.22443,0	1/1:74:1,73:1:36:73:2624:-232.809,-18.6779,0	0/1:164:87,77:87:3092:77:2749:-198.283,0,-229.141	1/1:93:2,91:2:72:91:3272:-287.862,-21.1591,0	0/1:74:34,40:34:1203:40:1428:-106.541,0,-86.2988	1/1:113:0,113:0:0:113:4040:-363.781,-34.0164,0	1/1:130:2,128:2:72:128:4593:-406.695,-32.2972,0	1/1:101:0,101:0:0:101:3628:-326.724,-30.404,0	1/1:85:0,85:0:0:85:3044:-274.182,-25.5876,0	1/1:195:0,195:0:0:195:7004:-630.42,-58.7009,0	0/1:81:35,46:35:1251:46:1656:-124.945,0,-88.5108	0/1:68:26,42:26:915:42:1489:-113.833,0,-62.1955	1/1:130:0,130:0:0:130:4647:-418.392,-39.1339,0	0/1:77:37,40:37:1295:40:1421:-105.006,0,-93.671	0/1:91:49,42:49:1731:42:1508:-108.621,0,-128.68	0/1:218:108,110:108:3839:110:3936:-288.808,0,-280.084	0/1:175:97,78:97:3450:78:2793:-198.928,0,-258.033	0/1:155:100,55:100:3584:55:1976:-131.455,0,-276.107	0/1:46:31,15:31:1104:15:540:-35.0892,0,-85.8233	1/1:100:0,100:0:0:100:3566:-320.984,-30.103,0	1/1:84:0,84:0:0:84:3001:-270.32,-25.2865,0	0/1:292:150,141:150:5360:141:5055:-367.134,0,-394.574	0/1:187:110,77:110:3935:77:2752:-191.63,0,-298.049	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	0/1:288:155,133:155:5532:133:4773:-343.029,0,-411.308	0/1:181:90,91:90:3198:91:3263:-239.403,0,-233.557	1/1:119:0,119:0:0:119:4265:-384.026,-35.8226,0	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:22:11,11:11:388:11:388:-28.6347,0,-28.6347	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:205:0,205:0:0:205:7354:-661.905,-61.7112,0	1/1:249:0,249:0:0:249:8921:-802.867,-74.9565,0	0/1:117:59,58:59:2099:58:2065:-150.9,0,-153.959	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:228:121,107:121:4308:107:3840:-277.151,0,-319.262	1/1:68:1,67:1:36:67:2400:-212.659,-16.8718,0	0/1:164:62,102:62:2216:102:3664:-280.594,0,-150.336	0/1:59:34,25:34:1207:25:900:-63.5602,0,-91.1745	1/1:76:0,76:0:0:76:2728:-245.763,-22.8783,0	0/1:84:35,49:35:1260:49:1764:-133.757,0,-88.419	0/1:138:74,64:74:2648:64:2300:-165.719,0,-197.024	0/1:189:104,85:104:3723:85:3056:-218.371,0,-278.376	1/1:142:0,142:0:0:142:5077:-457.074,-42.7463,0	1/1:156:0,156:0:0:156:5568:-501.243,-46.9607,0	1/1:214:0,214:0:0:214:7676:-690.827,-64.4204,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:203:0,203:0:0:203:7278:-655.07,-61.1091,0	0/1:61:33,28:33:1179:28:1008:-72.6735,0,-88.0544	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:169:100,69:100:3555:69:2464:-171.14,0,-269.283	1/1:21:0,21:0:0:21:743:-67.1905,-6.32163,0	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/1:30:14,16:14:504:16:576:-43.1441,0,-36.6672	0/1:149:81,67:81:2873:67:2400:-170.567,0,-213.895	1/1:196:0,195:0:0:195:7003:-629.97,-58.7009,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:184:90,94:90:3196:94:3368:-247.946,0,-232.473	1/1:232:3,229:3:108:229:8208:-728.656,-59.7638,0	0/1:105:43,62:43:1517:62:2214:-167.917,0,-105.213	1/1:78:1,77:1:36:77:2764:-245.4,-19.8821,0	0/1:117:61,55:61:2176:55:1968:-142.115,0,-160.827	0/1:179:118,61:118:4218:61:2192:-143.661,0,-325.915	1/1:66:0,66:0:0:66:2367:-213.288,-19.868,0	1/1:75:0,75:0:0:75:2677:-241.166,-22.5773,0	1/1:130:0,130:0:0:130:4640:-417.762,-39.1339,0	0/1:51:23,28:23:828:28:1008:-75.6838,0,-59.4916	1/1:131:0,131:0:0:131:4689:-422.169,-39.4349,0	0/1:80:23,57:23:828:57:2048:-160.509,0,-50.7617	1/1:236:0,236:0:0:236:8454:-760.854,-71.0431,0	1/1:145:0,145:0:0:145:5196:-467.779,-43.6494,0	0/1:224:109,114:109:3898:114:4092:-300.975,0,-283.523	0/1:118:74,44:74:2643:44:1580:-106.962,0,-202.595	0/1:12:8,4:8:270:4:144:-9.70126,0,-21.0153	1/1:115:0,115:0:0:115:4124:-371.344,-34.6185,0	1/1:188:1,187:1:36:187:6684:-598.036,-52.9954,0	1/1:263:2,261:2:72:261:9352:-834.806,-72.3342,0	1/1:115:0,115:0:0:115:4094:-368.647,-34.6185,0	0/1:98:61,37:61:2167:37:1328:-90.3213,0,-165.795	0/1:99:61,38:61:2148:38:1364:-93.2587,0,-163.784	1/1:143:0,143:0:0:143:5124:-461.302,-43.0473,0	0/1:45:19,26:19:671:26:936:-71.0131,0,-47.1694	0/1:81:43,38:43:1520:38:1355:-97.8663,0,-112.707	1/1:98:1,96:1:36:96:3448:-306.934,-25.9615,0	1/1:122:1,121:1:36:121:4317:-385.103,-33.1274,0	0/1:226:101,125:101:3582:125:4454:-332.996,0,-254.554	0/1:62:44,18:44:1555:18:643:-39.5363,0,-121.577	1/1:91:0,91:0:0:91:3264:-292.959,-27.3937,0	1/1:107:0,107:0:0:107:3828:-344.717,-32.2102,0
chr04	10311408	.	T	C	145427	PASS	AB=0.49791;ABP=3.18278;AC=143;AF=0.760638;AN=188;AO=6948;CIGAR=1X;DP=9250;DPB=9250;DPRA=0;EPP=15081.7;EPPR=4975.69;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.9752;MQMR=59.9791;NS=94;NUMALT=1;ODDS=6.11826;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=247292;QR=82186;RO=2294;RPL=2;RPP=15073;RPPR=4975.69;RPR=6946;RUN=1;SAF=1;SAP=15081.7;SAR=6947;SRF=0;SRP=4984.37;SRR=2294;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:19,8:19:684:8:284:-17.7755,0,-53.7625	1/1:148:0,148:0:0:148:5275:-474.886,-44.5524,0	1/1:132:0,132:0:0:132:4679:-421.272,-39.736,0	1/1:137:0,137:0:0:137:4888:-440.072,-41.2411,0	1/1:95:1,93:1:36:93:3310:-294.521,-25.0584,0	1/1:60:0,60:0:0:60:2160:-194.667,-18.0618,0	0/1:89:47,42:47:1684:42:1454:-104.356,0,-125.055	1/1:77:0,77:0:0:77:2743:-247.113,-23.1793,0	0/1:49:24,25:24:864:25:896:-66.2099,0,-63.3321	1/1:92:0,92:0:0:92:3263:-293.89,-27.6948,0	1/1:116:0,116:0:0:116:4145:-373.232,-34.9195,0	1/1:69:0,69:0:0:69:2454:-221.114,-20.7711,0	1/1:88:0,88:0:0:88:3088:-278.147,-26.4906,0	1/1:117:1,116:1:36:116:4123:-367.657,-31.6222,0	0/1:57:32,25:32:1148:25:896:-63.8016,0,-86.4711	0/1:48:27,21:27:972:21:752:-53.5568,0,-73.3485	1/1:88:0,88:0:0:88:3117:-280.757,-26.4906,0	0/1:47:26,21:26:924:21:732:-52.0503,0,-69.3292	0/1:73:39,34:39:1381:34:1224:-88.4919,0,-102.612	0/1:207:95,112:95:3408:112:4012:-298.95,0,-244.621	0/1:62:26,36:26:936:36:1256:-94.6766,0,-65.8956	0/1:227:145,82:145:5177:82:2889:-191.911,0,-397.736	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	1/1:102:7,95:7:252:95:3384:-281.746,-7.6761,0	1/1:55:0,55:0:0:55:1963:-176.945,-16.5567,0	0/1:270:138,132:138:4936:132:4669:-339.096,0,-363.113	0/1:181:93,88:93:3344:88:3164:-230.497,0,-246.69	1/1:34:0,34:0:0:34:1220:-110.107,-10.235,0	0/1:387:192,194:192:6887:194:6926:-506.993,0,-503.481	0/1:221:88,133:88:3160:133:4722:-358.61,0,-218.097	1/1:57:0,57:0:0:57:2040:-183.872,-17.1587,0	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/1:23:17,6:17:608:6:216:-12.8668,0,-48.1283	1/1:7:0,7:0:0:7:243:-22.2075,-2.10721,0	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	1/1:40:1,39:1:36:39:1385:-121.35,-8.44293,0	1/1:172:0,172:0:0:172:6064:-545.83,-51.7772,0	1/1:179:2,175:2:72:175:6253:-556.026,-46.8054,0	0/1:102:42,60:42:1512:60:2116:-160.003,0,-105.67	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	0/1:116:51,65:51:1836:65:2304:-172.7,0,-130.601	1/1:51:0,51:0:0:51:1820:-164.081,-15.3525,0	0/1:141:67,74:67:2399:74:2631:-194.592,0,-173.721	0/1:54:28,26:28:995:26:911:-65.9899,0,-73.6084	1/1:44:0,44:0:0:44:1559:-140.601,-13.2453,0	0/1:103:45,57:45:1616:57:2027:-151.636,0,-114.665	0/1:175:78,97:78:2792:97:3472:-260.012,0,-198.84	0/1:151:91,60:91:3268:60:2119:-145.52,0,-248.884	1/1:112:0,112:0:0:112:3993:-359.543,-33.7154,0	1/1:184:0,184:0:0:184:6550:-589.583,-55.3895,0	1/1:213:0,213:0:0:213:7633:-687.004,-64.1194,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:240:0,240:0:0:240:8531:-767.789,-72.2472,0	0/1:58:21,37:21:741:37:1298:-99.6594,0,-49.5519	1/1:44:1,43:1:32:43:1540:-135.694,-10.046,0	0/1:174:77,97:77:2764:97:3455:-258.784,0,-196.622	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:17:8,9:8:288:9:324:-24.3883,0,-21.1499	0/1:49:21,28:21:756:28:1000:-75.5649,0,-53.6061	0/1:91:31,60:31:1108:60:2117:-163.403,0,-72.6373	1/1:130:1,129:1:36:129:4584:-409.128,-35.5356,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:179:75,104:75:2692:104:3698:-279.139,0,-188.64	1/1:218:0,218:0:0:218:7748:-697.342,-65.6245,0	0/1:75:34,41:34:1220:41:1472:-110.199,0,-87.5296	1/1:65:0,65:0:0:65:2308:-207.98,-19.567,0	0/1:119:55,64:55:1972:64:2300:-171.438,0,-141.932	0/1:169:126,43:126:4532:43:1544:-88.379,0,-356.681	1/1:38:0,37:0:0:37:1316:-118.421,-11.1381,0	1/1:83:0,83:0:0:83:2976:-268.072,-24.9855,0	1/1:111:0,111:0:0:111:3951:-355.783,-33.4143,0	0/1:25:16,9:16:576:9:324:-21.9801,0,-44.6492	1/1:33:0,33:0:0:33:1165:-103.863,-9.93399,0	0/1:54:19,35:19:675:35:1251:-96.6387,0,-44.8213	1/1:113:1,112:1:36:112:4020:-358.389,-30.4181,0	1/1:156:0,156:0:0:156:5600:-504.12,-46.9607,0	0/1:137:65,71:65:2328:71:2519:-185.662,0,-168.462	0/1:101:53,48:53:1900:48:1724:-125.041,0,-140.874	0/1:20:8,12:8:284:12:432:-33.2006,0,-19.8828	1/1:150:0,150:0:0:150:5361:-482.623,-45.1545,0	1/1:105:0,104:0:0:104:3706:-333.382,-31.3071,0	1/1:228:0,228:0:0:228:8108:-729.739,-68.6348,0	1/1:83:0,83:0:0:83:2930:-263.934,-24.9855,0	0/1:54:30,24:30:1059:24:832:-58.9384,0,-79.3648	0/1:55:27,28:27:964:28:999:-73.6679,0,-70.5202	1/1:101:0,101:0:0:101:3576:-322.046,-30.404,0	0/1:38:19,19:19:684:19:680:-50.09,0,-50.4512	0/1:75:40,35:40:1428:35:1240:-89.3261,0,-106.24	1/1:82:0,82:0:0:82:2912:-262.314,-24.6845,0	1/1:69:0,69:0:0:69:2456:-221.295,-20.7711,0	0/1:155:87,68:87:3111:68:2431:-172.385,0,-233.557	0/1:56:39,17:39:1389:17:589:-36.4756,0,-108.449	1/1:64:0,64:0:0:64:2292:-206.541,-19.2659,0	1/1:80:0,80:0:0:80:2843:-256.106,-24.0824,0
chr04	12631516	.	GGT	CGT,CGC	351672	PASS	AB=0.51412,0.48244;ABP=12.5767,17.8049;AC=143,45;AF=0.760638,0.239362;AN=188;AO=10111,2691;CIGAR=1X2M,1X1M1X;DP=12836;DPB=12844;DPRA=19.7066,1.0074;EPP=21958.8,5837.76;EPPR=16.0391;GTI=2;LEN=1,3;MEANALT=1.84946,2.31481;MQM=59.853,57.1787;MQMR=60;NS=94;NUMALT=2;ODDS=10.1805;PAIRED=0,0;PAIREDR=0;PAO=8.5,8.5;PQA=300,300;PQR=0;PRO=7;QA=359717,94184;QR=150;RO=6;RPL=5272,1489;RPP=43.2761,69.477;RPPR=16.0391;RPR=4839,1202;RUN=1,1;SAF=5272,1490;SAP=43.2761,70.4066;SAR=4839,1201;SRF=0;SRP=16.0391;SRR=6;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:32:0,18,14:0:0:18,14:639,478:-91.133,-39.0602,-33.6417,-52.4197,0,-48.2053	1/1:211:0,209,1:0:0:209,1:7394,36:-665.139,-62.9153,0,-662.202,-59.9679,-661.901	1/1:269:0,268,1:0:0:268,1:9552,36:-859.193,-80.676,0,-856.264,-77.3878,-855.963	1/1:283:0,282,0:0:0:282,0:9966,0:-896.558,-84.8905,0,-896.558,-84.8905,-896.558	1/1:55:0,55,0:0:0:55,0:1972,0:-177.746,-16.5567,0,-177.746,-16.5567,-177.746	1/1:46:0,46,0:0:0:46,0:1656,0:-149.312,-13.8474,0,-149.312,-13.8474,-149.312	1/2:154:0,97,57:0:0:97,57:3453,2000:-444.528,-163.103,-133.903,-281.778,0,-264.619	1/1:210:1,209,0:1:21:209,0:7390,0:-662.832,-61.1164,0,-663.133,-62.9153,-664.722	1/2:125:0,70,55:0:0:70,55:2511,1944:-362.997,-158.373,-137.3,-204.979,0,-188.423	1/1:169:0,169,0:0:0:169,0:6030,0:-542.788,-50.8741,0,-542.788,-50.8741,-542.788	1/1:96:1,95,0:1:28:95,0:3382,0:-301.793,-26.0992,0,-302.094,-28.5979,-304.312	1/1:168:0,167,0:0:0:167,0:5914,0:-532.007,-50.272,0,-532.007,-50.272,-532.007	1/1:137:0,137,0:0:0:137,0:4867,0:-438.11,-41.2411,0,-438.11,-41.2411,-438.11	1/1:115:0,115,0:0:0:115,0:4052,0:-364.79,-34.6185,0,-364.79,-34.6185,-364.79	1/2:169:0,85,84:0:0:85,84:3018,2954:-486.381,-240.531,-214.943,-246.203,0,-220.916	1/2:124:0,64,58:0:0:64,58:2284,2036:-351.691,-165.491,-146.225,-186.298,0,-168.839	1/1:92:0,91,1:0:0:91,1:3204,33:-287.951,-27.3937,0,-285.283,-24.3956,-284.982	1/2:98:0,48,50:0:0:48,50:1683,1756:-280.069,-143.126,-128.677,-137.293,0,-122.242	1/2:83:0,55,28:0:0:55,28:1961,1000:-241.227,-81.3865,-64.8299,-160.196,0,-151.767	1/2:164:0,86,76:0:0:86,76:3080,2689:-470.131,-218.947,-193.059,-251.151,0,-228.272	1/2:203:1,105,94:1:27:105,94:3733,3305:-570.717,-266.839,-237.358,-302.105,0,-275.936	1/2:60:0,16,44:0:0:16,44:564,1562:-173.192,-127.272,-122.455,-46.2174,0,-32.9721	1/2:59:0,27,32:0:0:27,32:972,1125:-171.196,-91.8844,-83.7566,-79.6678,0,-70.0348	1/1:118:0,113,5:0:0:113,5:3999,164:-359.766,-34.0164,0,-346.517,-20.4383,-345.012	1/1:97:0,97,0:0:0:97,0:3468,0:-312.323,-29.1999,0,-312.323,-29.1999,-312.323	1/2:331:0,176,154:0:0:176,154:6248,5327:-941.802,-432.72,-379.739,-509.073,0,-462.714	1/2:301:1,121,178:1:27:121,178:4301,6228:-853.118,-502.958,-468.662,-348.347,0,-296.892	1/1:78:0,78,0:0:0:78,0:2786,0:-250.981,-23.4803,0,-250.981,-23.4803,-250.981	1/2:256:0,138,118:0:0:138,118:4893,4140:-735.645,-337.02,-295.477,-398.978,0,-363.457	1/2:150:0,86,63:0:0:86,63:3005,2178:-421.266,-176.819,-150.93,-244.598,0,-225.633	1/1:141:0,141,0:0:0:141,0:5039,0:-453.654,-42.4452,0,-453.654,-42.4452,-453.654	1/2:11:0,6,5:0:0:6,5:208,167:-30.7381,-13.8245,-12.0183,-17.2529,0,-15.7478	1/2:24:0,14,10:0:0:14,10:504,360:-70.8117,-29.6876,-25.4732,-41.4837,0,-38.4734	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:24:1,23,0:1:26:23,0:807,0:-70.3402,-4.62489,0,-70.6413,-6.92369,-72.6763	1/1:30:0,30,0:0:0:30,0:1076,0:-97.1443,-9.0309,0,-97.1443,-9.0309,-97.1443	1/1:394:0,394,0:0:0:394,0:14031,0:-1262.38,-118.606,0,-1262.38,-118.606,-1262.38	1/1:128:0,127,0:0:0:127,0:4500,0:-404.955,-38.2308,0,-404.955,-38.2308,-404.955	1/2:108:0,44,63:0:0:44,63:1563,2181:-304.173,-176.809,-163.563,-127.497,0,-108.532	2/2:7:0,0,7:0:0:0,7:0,249:-22.7275,-22.7275,-22.7275,-2.10721,-2.10721,0	1/2:161:0,99,61:0:0:99,61:3548,2123:-461.43,-172.105,-142.303,-289.404,0,-271.041	1/1:57:0,57,0:0:0:57,0:2031,0:-183.057,-17.1587,0,-183.057,-17.1587,-183.057	1/2:107:0,57,50:0:0:57,50:2017,1754:-307.269,-142.996,-125.838,-164.624,0,-149.573	1/2:142:0,67,75:0:0:67,75:2400,2626:-409.575,-213.844,-193.675,-196.085,0,-173.508	1/1:137:0,136,0:0:0:136,0:4832,0:-434.612,-40.9401,0,-434.612,-40.9401,-434.612	1/2:93:0,40,53:0:0:40,53:1436,1857:-268.562,-151.42,-139.379,-117.496,0,-101.542	1/2:123:0,63,60:0:0:63,60:2224,2075:-349.658,-168.566,-149.601,-181.382,0,-163.32	1/2:227:0,133,93:0:0:133,93:4741,3236:-649.064,-262.636,-222.599,-386.508,0,-358.512	1/1:193:0,193,0:0:0:193,0:6911,0:-622.045,-58.0988,0,-622.045,-58.0988,-622.045	1/1:289:1,288,0:1:21:288,0:10282,0:-923.197,-84.8977,0,-923.498,-86.6966,-925.087	1/1:168:0,168,0:0:0:168,0:5974,0:-537.764,-50.573,0,-537.764,-50.573,-537.764	1/1:8:0,8,0:0:0:8,0:288,0:-26.265,-2.40824,0,-26.265,-2.40824,-26.265	1/1:159:0,158,1:0:0:158,1:5663,34:-509.441,-47.5627,0,-506.712,-44.497,-506.411	1/2:40:0,20,20:0:0:20,20:708,706:-115.507,-57.8351,-51.8145,-58.025,0,-52.0044	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:201:0,114,86:0:0:114,86:4057,3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chr04	14381752	.	C	T	41852.3	PASS	AB=0.522021;ABP=24.433;AC=48;AF=0.255319;AN=188;AO=2669;CIGAR=1X;DP=9807;DPB=9807;DPRA=1.09094;EPP=5798.67;EPPR=15474.8;GTI=0;LEN=1;MEANALT=1.09259;MQM=40.2859;MQMR=40.2571;NS=94;NUMALT=1;ODDS=2.54246;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=95556;QR=254491;RO=7125;RPL=0;RPP=5798.67;RPPR=15474.8;RPR=2669;RUN=1;SAF=2669;SAP=5798.67;SAR=0;SRF=7125;SRP=15474.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:67:30,37:30:1076:37:1305:-90.3239,0,-69.7532	0/0:167:167,0:167:5976:0:0:0,-50.272,-505.511	0/0:119:119,0:119:4260:0:0:0,-35.8226,-357.367	0/0:208:208,0:208:7440:0:0:0,-62.6142,-647.957	0/0:94:92,2:92:3292:2:72:0,-21.7968,-277.252	0/0:69:69,0:69:2480:0:0:0,-20.7711,-208.9	0/1:95:48,47:48:1712:47:1688:-119.606,0,-120.067	0/1:216:98,118:98:3492:118:4240:-289.839,0,-227.88	0/1:114:47,67:47:1665:67:2404:-165.964,0,-103.56	0/0:99:99,0:99:3516:0:0:0,-29.802,-305.697	0/0:55:55,0:55:1972:0:0:0,-16.5566,-171.651	0/0:78:77,0:77:2760:0:0:0,-23.1793,-232.66	0/0:83:83,0:83:2976:0:0:0,-24.9855,-249.406	0/0:65:65,0:65:2320:0:0:0,-19.5669,-199.363	0/0:82:80,1:80:2868:1:36:0,-21.7709,-245.639	0/1:58:31,27:31:1108:27:968:-65.0021,0,-78.1584	0/0:64:64,0:64:2284:0:0:0,-19.2659,-192.916	0/1:74:34,40:34:1224:40:1436:-98.1829,0,-79.5109	0/1:66:30,36:30:1060:36:1296:-86.8195,0,-69.0079	0/1:222:97,125:97:3472:125:4465:-320.952,0,-236.395	0/1:167:70,97:70:2504:97:3468:-248.419,0,-164.416	0/1:118:38,80:38:1356:80:2861:-215.683,0,-83.6684	0/1:98:45,53:45:1592:53:1892:-134.949,0,-107.413	0/0:183:177,6:177:6348:6:216:0,-36.7472,-525.606	0/0:88:88,0:88:3156:0:0:0,-26.4906,-270.817	0/1:331:183,148:183:6544:148:5312:-368.306,0,-474.772	0/1:214:110,104:110:3917:104:3736:-255.269,0,-268.631	0/1:50:30,20:30:1080:20:720:-46.795,0,-77.7955	0/1:203:86,117:86:3080:117:4204:-307.815,0,-210.458	0/1:87:51,36:51:1820:36:1277:-84.3549,0,-130.078	0/0:108:108,0:108:3872:0:0:0,-32.5112,-333.591	0/1:11:5,6:5:180:6:216:-15.4845,0,-11.4978	0/1:20:12,8:12:432:8:288:-19.1972,0,-31.6333	0/0:6:6,0:6:216:0:0:0,-1.80618,-18.6318	0/1:7:5,2:5:180:2:72:-1.8573,0,-13.4757	0/0:12:12,0:12:428:0:0:0,-3.61236,-36.6661	0/0:238:237,0:237:8485:0:0:0,-71.3441,-745.088	0/0:217:215,0:215:7660:0:0:0,-64.7214,-653.982	0/1:87:44,43:44:1561:43:1540:-104.174,0,-105.292	0/1:4:1,3:1:36:3:104:-8.04647,0,-2.25037	0/1:140:75,64:75:2680:64:2296:-155.005,0,-189.059	0/1:53:31,22:31:1116:22:792:-51.921,0,-77.9042	0/1:163:79,84:79:2828:84:3004:-202.94,0,-193.14	0/1:97:51,46:51:1813:46:1652:-115.113,0,-129.266	0/0:80:79,1:79:2812:1:36:0,-21.1796,-239.785	0/1:45:23,22:23:824:22:788:-56.4944,0,-59.3055	0/1:177:94,83:94:3344:83:2965:-193.614,0,-227.945	0/1:223:103,120:103:3649:120:4292:-306.307,0,-250.945	0/1:154:69,85:69:2480:85:3044:-219.9,0,-167.954	0/0:154:153,0:153:5488:0:0:0,-46.0576,-471.815	0/0:124:124,0:124:4420:0:0:0,-37.3277,-388.855	0/0:8:8,0:8:284:0:0:0,-2.40824,-24.927	0/0:130:126,2:126:4496:2:72:0,-32.3769,-369.784	0/1:69:35,34:35:1248:34:1212:-86.3835,0,-87.5274	0/0:17:17,0:17:608:0:0:0,-5.11751,-51.911	0/1:144:75,69:75:2676:69:2480:-170.368,0,-186.391	0/1:86:40,46:40:1420:46:1636:-117.36,0,-97.6749	0/1:9:7,2:7:252:2:72:-4.00936,0,-19.4816	0/1:23:6,17:6:216:17:608:-45.865,0,-12.525	0/1:84:43,41:43:1532:41:1468:-99.4083,0,-107.039	0/0:115:115,0:115:4109:0:0:0,-34.6184,-356.586	0/0:11:11,0:11:392:0:0:0,-3.31133,-34.6499	0/1:220:106,114:106:3753:114:4084:-294.066,0,-263.309	0/0:186:184,2:184:6568:2:72:0,-49.3364,-564.995	0/1:109:68,41:68:2436:41:1464:-93.2084,0,-175.425	0/0:90:89,0:89:3169:0:0:0,-26.7917,-275.781	0/1:225:99,126:99:3528:126:4508:-324.055,0,-240.462	0/1:102:39,63:39:1400:63:2252:-166.089,0,-91.2899	0/0:25:25,0:25:896:0:0:0,-7.52575,-76.5336	0/0:40:40,0:40:1416:0:0:0,-12.0412,-119.524	0/0:88:88,0:88:3152:0:0:0,-26.4906,-276.877	0/1:28:10,18:10:360:18:648:-48.6652,0,-23.2436	0/0:24:24,0:24:860:0:0:0,-7.22472,-72.2692	0/0:81:81,0:81:2896:0:0:0,-24.3834,-244.418	0/0:165:165,0:165:5880:0:0:0,-49.6699,-501.829	0/0:163:163,0:163:5840:0:0:0,-49.0679,-506.242	0/1:106:49,57:49:1736:57:2052:-142.134,0,-114.288	0/1:117:48,69:48:1720:69:2453:-172.619,0,-110.121	0/1:12:4,8:4:144:8:288:-21.1171,0,-8.92176	0/0:121:121,0:121:4336:0:0:0,-36.4246,-371.584	0/0:107:107,0:107:3816:0:0:0,-32.2102,-318.643	0/0:288:287,0:287:10221:0:0:0,-86.3956,-886.529	0/0:116:115,0:115:4128:0:0:0,-34.6184,-358.733	0/0:42:42,0:42:1504:0:0:0,-12.6433,-130.4	0/1:105:56,49:56:1989:49:1760:-120.474,0,-139.639	0/0:154:154,0:154:5471:0:0:0,-46.3586,-477.465	0/1:61:32,29:32:1144:29:1040:-69.859,0,-79.0243	0/1:92:41,51:41:1468:51:1813:-121.995,0,-93.3169	0/0:90:90,0:90:3236:0:0:0,-27.0927,-271.053	0/0:35:35,0:35:1256:0:0:0,-10.536,-107.728	0/1:63:25,38:25:888:38:1360:-98.6946,0,-57.6606	0/1:70:26,43:26:924:43:1529:-113.11,0,-60.1751	0/0:104:104,0:104:3704:0:0:0,-31.3071,-322.069	0/0:128:128,0:128:4565:0:0:0,-38.5318,-397.185
chr04	14381796	.	AAGCG	GAACA,GAACG	257867	PASS	AB=0.344477,0.647444;ABP=1511.24,1358.61;AC=141,47;AF=0.75,0.25;AN=188;AO=7277,4691;CIGAR=1X1M1X1M1X,1X1M1X2M;DP=12063;DPB=12062.8;DPRA=0,1.73193;EPP=15787.4,10189.4;EPPR=0;GTI=9;LEN=5,5;MEANALT=2.52128,2.9403;MQM=40.0522,48.7617;MQMR=0;NS=94;NUMALT=2;ODDS=1.95097;PAIRED=0,0;PAIREDR=0;PAO=2,1;PQA=72,36;PQR=0;PRO=0;QA=256253,161030;QR=0;RO=0;RPL=7272,2689;RPP=15761.4,221.486;RPPR=0;RPR=5,2002;RUN=1,1;SAF=7272,2689;SAP=15761.4,221.486;SAR=5,2002;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:78:0,31,46:0:0:31,46:1077,1598:-205.144,-123.476,-114.144,-81.7237,0,-67.8764	1/1:170:0,169,0:0:0:169,0:5959,0:-504.808,-50.8741,0,-504.808,-50.8741,-504.808	1/1:128:0,126,1:0:0:126,1:4423,36:-372.138,-37.9298,0,-369.201,-34.9924,-368.9	1/1:211:0,210,0:0:0:210,0:7426,0:-648.762,-63.2163,0,-648.762,-63.2163,-648.762	1/1:98:0,96,2:0:0:96,2:3379,72:-291.694,-28.8989,0,-286.138,-23.001,-285.536	1/1:73:0,73,0:0:0:73,0:2598,0:-218.355,-21.9752,0,-218.355,-21.9752,-218.355	1/2:190:0,51,138:0:0:51,138:1805,4714:-519.659,-379.068,-363.716,-140.658,0,-99.1163	1/2:259:0,97,157:0:0:97,157:3361,5412:-673.7,-419.243,-390.043,-254.532,0,-207.27	1/2:181:0,48,130:0:0:48,130:1683,4419:-471.97,-346.796,-332.346,-125.195,0,-86.0607	1/1:100:0,99,0:0:0:99,0:3469,0:-302.58,-29.802,0,-302.58,-29.802,-302.58	1/1:58:0,57,0:0:0:57,0:2033,0:-177.104,-17.1587,0,-177.104,-17.1587,-177.104	1/1:82:0,81,1:0:0:81,1:2844,36:-240.06,-24.3834,0,-237.122,-21.0862,-236.821	1/1:85:0,84,0:0:0:84,0:2965,0:-248.515,-25.2865,0,-248.515,-25.2865,-248.515	1/1:68:0,66,1:0:0:66,1:2296,36:-197.644,-19.868,0,-194.706,-16.8986,-194.405	1/1:83:0,82,0:0:0:82,0:2904,0:-250.688,-24.6845,0,-250.688,-24.6845,-250.688	1/2:89:0,32,57:0:0:32,57:1135,1972:-245.026,-156.896,-147.263,-88.4693,0,-71.3106	1/1:66:0,65,1:0:0:65,1:2287,36:-193.797,-19.567,0,-190.859,-16.2697,-190.558	1/2:112:0,34,76:0:0:34,76:1209,2600:-294.812,-204.11,-193.875,-90.707,0,-67.8287	1/2:109:0,31,78:0:0:31,78:1089,2631:-288.735,-207.044,-197.712,-82.0187,0,-58.5383	1/2:295:0,97,198:0:0:97,198:3434,6781:-809.973,-539.855,-510.656,-270.458,0,-210.854	1/2:222:0,74,146:0:0:74,146:2592,4998:-593.191,-393.537,-371.261,-199.744,0,-155.794	1/2:123:0,39,84:0:0:39,84:1374,2939:-342.539,-234.092,-222.352,-108.79,0,-83.5031	1/2:172:0,47,124:0:0:47,124:1618,4269:-467.294,-342.134,-327.986,-125.221,0,-87.893	1/1:199:0,185,14:0:0:185,14:6549,482:-560.817,-55.6906,0,-522.273,-16.8077,-518.059	1/1:93:0,91,1:0:0:91,1:3162,34:-271.192,-27.3937,0,-268.434,-24.5908,-268.133	1/2:345:0,187,155:0:0:187,155:6579,5421:-954.261,-432.738,-376.446,-521.578,0,-474.918	1/2:318:0,113,204:0:0:113,204:3977,7044:-864.585,-559.229,-525.212,-305.441,0,-244.031	1/2:72:0,31,40:0:0:31,40:1100,1366:-193.011,-108.155,-98.823,-84.8474,0,-72.8062	1/2:210:0,87,122:0:0:87,122:3050,4201:-577.253,-334.138,-307.949,-243.15,0,-206.425	1/2:160:0,49,107:0:0:49,107:1720,3684:-428.452,-294.855,-280.105,-133.625,0,-101.414	1/1:112:0,111,1:0:0:111,1:3891,26:-334.547,-33.4143,0,-332.509,-31.1155,-332.208	1/2:14:0,5,9:0:0:5,9:180,298:-36.5324,-23.5498,-22.0446,-13.3039,0,-10.5947	1/2:40:0,13,27:0:0:13,27:452,930:-110.365,-75.0731,-71.1597,-35.6285,0,-27.5007	1/1:6:0,6,0:0:0:6,0:214,0:-18.5145,-1.80618,0,-18.5145,-1.80618,-18.5145	1/1:7:0,7,0:0:0:7,0:249,0:-19.1215,-2.10721,0,-19.1215,-2.10721,-19.1215	1/1:12:0,12,0:0:0:12,0:426,0:-36.5148,-3.61236,0,-36.5148,-3.61236,-36.5148	1/1:241:0,240,0:0:0:240,0:8434,0:-742.183,-72.2472,0,-742.183,-72.2472,-742.183	1/1:223:0,219,1:0:0:219,1:7733,36:-661.452,-65.9256,0,-658.515,-62.9695,-658.213	1/2:141:0,45,96:0:0:45,96:1593,3312:-382.65,-261.875,-248.329,-121.108,0,-92.2095	1/2:5:0,1,4:0:0:1,4:35,134:-13.5169,-10.7724,-10.4714,-3.07967,0,-1.87555	1/2:195:0,78,114:0:0:78,114:2750,3867:-517.624,-305.259,-281.778,-212.341,0,-178.024	1/2:83:0,31,52:0:0:31,52:1110,1815:-228.701,-144.893,-135.561,-84.1451,0,-68.4915	1/2:207:0,77,122:0:0:77,122:2722,4145:-536.182,-325.606,-302.427,-210.634,0,-173.909	1/2:146:0,52,93:0:0:52,93:1824,3231:-402.187,-258.384,-242.73,-143.892,0,-115.896	1/1:84:0,83,0:0:0:83,0:2904,0:-250.996,-24.9855,0,-250.996,-24.9855,-250.996	1/2:48:0,24,24:0:0:24,24:845,818:-133.032,-65.735,-58.5102,-67.6373,0,-60.4126	1/2:253:0,101,152:0:0:101,152:3551,5195:-674.906,-407.359,-376.955,-267.877,0,-222.12	1/2:314:0,101,212:0:0:101,212:3545,7286:-859.277,-581.184,-550.78,-278.22,0,-214.402	1/2:271:0,69,199:0:0:69,199:2442,6791:-734.461,-544.465,-523.694,-190.059,0,-130.154	1/1:155:0,155,0:0:0:155,0:5502,0:-474.25,-46.6597,0,-474.25,-46.6597,-474.25	1/1:127:0,127,0:0:0:127,0:4428,0:-389.852,-38.2308,0,-389.852,-38.2308,-389.852	1/1:8:0,8,0:0:0:8,0:277,0:-24.3973,-2.40824,0,-24.3973,-2.40824,-24.3973	1/1:132:0,130,2:0:0:130,2:4547,72:-380.438,-39.1339,0,-374.942,-33.6523,-374.34	1/2:73:0,37,36:0:0:37,36:1272,1233:-198.235,-98.5448,-87.4067,-100.025,0,-89.1879	1/1:17:0,17,0:0:0:17,0:598,0:-51.2541,-5.11751,0,-51.2541,-5.11751,-51.2541	1/2:216:0,77,137:0:0:77,137:2725,4707:-5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chr04	14558794	.	CAAAATATG	CAAATATG	5608.56	PASS	AB=0.457673;ABP=83.5252;AC=47;AF=0.25;AN=188;AO=2378;CIGAR=1M1D7M;DP=11634;DPB=11369.8;DPRA=0.888462;EPP=5166.77;EPPR=20002.3;GTI=7;LEN=1;MEANALT=1.30769;MQM=25.0728;MQMR=59.9376;NS=94;NUMALT=1;ODDS=0.368282;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54602;QR=323496;RO=9210;RPL=2378;RPP=5166.77;RPPR=20002.3;RPR=0;RUN=1;SAF=0;SAP=5166.77;SAR=2378;SRF=0;SRP=20002.3;SRR=9210;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:17,18:17:597:18:406:-21.2639,0,-43.1629	0/0:172:172,0:172:6033:0:0:0,-51.7772,-542.956	0/0:188:186,0:186:6549:0:0:0,-55.9916,-589.251	0/0:291:290,0:290:10173:0:0:0,-87.2987,-914.859	0/0:115:114,1:114:4019:1:21:0,-32.8177,-360.088	0/0:75:74,0:74:2593:0:0:0,-22.2762,-233.192	0/1:164:84,80:84:2936:80:1850:-98.7175,0,-214.954	0/1:200:113,86:113:3928:86:1959:-94.6595,0,-293.459	0/1:65:37,28:37:1301:28:654:-32.7501,0,-97.6946	0/0:148:148,0:148:5174:0:0:0,-44.5524,-465.817	0/0:165:165,0:165:5804:0:0:0,-49.6699,-522.486	0/0:86:86,0:86:3036:0:0:0,-25.8886,-273.474	0/0:74:73,0:73:2577:0:0:0,-21.9752,-231.852	0/0:134:133,0:133:4657:0:0:0,-40.037,-418.941	0/0:59:59,0:59:2079:0:0:0,-17.7608,-187.382	0/1:71:41,30:41:1448:30:691:-33.7334,0,-109.242	0/0:108:107,0:107:3798:0:0:0,-32.2102,-341.658	0/1:81:53,28:53:1877:28:626:-24.8683,0,-144.826	0/1:50:19,31:19:674:31:695:-39.6425,0,-45.9364	0/1:209:134,75:134:4691:75:1733:-75.9842,0,-359.418	0/1:130:45,85:45:1560:85:1921:-113.229,0,-101.557	0/1:65:22,43:22:777:43:1015:-61.5994,0,-50.6861	0/1:36:21,15:21:746:15:339:-16.368,0,-56.6281	0/0:120:115,5:115:4025:5:122:0,-26.0048,-352.331	0/0:84:83,0:83:2924:0:0:0,-24.9855,-263.04	0/1:289:152,137:152:5337:137:3160:-161.825,0,-393.479	0/1:228:120,108:120:4200:108:2455:-125.806,0,-309.555	0/1:33:17,16:17:607:16:349:-17.3501,0,-45.0281	0/1:262:157,104:157:5530:104:2421:-113.043,0,-418.978	0/1:164:93,71:93:3261:71:1572:-73.9663,0,-244.304	0/0:136:136,0:136:4760:0:0:0,-40.9401,-428.573	0/1:15:4,11:4:141:11:246:-15.1247,0,-8.52158	0/1:35:21,14:21:737:14:323:-15.5018,0,-56.1171	0/0:8:8,0:8:270:0:0:0,-2.40824,-24.6293	0/0:32:32,0:32:1114:0:0:0,-9.63296,-100.568	0/0:18:18,0:18:630:0:0:0,-5.41854,-57.0261	0/0:203:203,0:203:7197:0:0:0,-61.1091,-647.641	0/0:290:289,0:289:10128:0:0:0,-86.9977,-910.81	0/1:107:59,48:59:2084:48:1131:-58.4462,0,-155.621	0/1:11:9,2:9:314:2:43:-0.204659,0,-25.2862	0/1:271:157,111:157:5504:111:2512:-117.489,0,-414.494	0/1:54:32,22:32:1131:22:492:-22.5547,0,-85.8433	0/1:184:96,88:96:3371:88:2050:-109.347,0,-248.224	0/1:89:48,41:48:1698:41:939:-48.2061,0,-126.316	0/0:54:53,0:53:1867:0:0:0,-15.9546,-167.95	0/1:133:81,52:81:2811:52:1210:-55.6481,0,-213.197	0/1:135:66,69:66:2325:69:1562:-82.602,0,-168.873	0/1:178:94,83:94:3324:83:1876:-95.4863,0,-245.789	0/1:113:50,60:50:1759:60:1396:-78.6302,0,-125.138	0/0:218:218,0:218:7650:0:0:0,-65.6245,-688.559	0/0:191:190,0:190:6641:0:0:0,-57.1957,-597.431	0/0:36:36,0:36:1251:0:0:0,-10.8371,-112.89	0/0:398:395,2:395:13956:2:44:0,-116.201,-1252.18	0/1:116:43,73:43:1517:73:1690:-98.5656,0,-101.905	0/0:31:30,0:30:1060:0:0:0,-9.0309,-95.3481	0/1:184:110,74:110:3862:74:1720:-82.3417,0,-292.397	0/1:35:21,14:21:733:14:326:-15.8144,0,-55.7563	0/1:13:5,8:5:180:8:182:-10.5051,0,-12.6387	0/1:38:29,9:29:1027:9:216:-5.78095,0,-81.3046	0/1:97:58,39:58:2030:39:880:-40.4869,0,-153.773	0/0:148:146,1:146:5147:1:21:0,-42.6457,-461.565	0/0:16:16,0:16:564:0:0:0,-4.81648,-51.0908	0/1:141:76,65:76:2668:65:1487:-74.6613,0,-197.921	0/0:261:260,0:260:9131:0:0:0,-78.2678,-821.13	0/1:118:67,50:67:2299:50:1145:-55.6029,0,-171.664	0/0:119:118,0:118:4160:0:0:0,-35.5215,-374.222	0/1:150:84,66:84:2955:66:1475:-71.339,0,-221.035	0/1:138:44,94:44:1554:94:2218:-137.502,0,-98.6085	0/0:71:71,0:71:2512:0:0:0,-21.3731,-226.335	0/0:112:112,0:112:3907:0:0:0,-33.7154,-351.833	0/0:86:86,0:86:3039:0:0:0,-25.8886,-273.745	0/1:38:26,12:26:922:12:271:-10.1818,0,-71.8585	0/0:120:119,0:119:4159:0:0:0,-35.8226,-373.912	0/0:139:138,1:138:4834:1:27:0,-39.1436,-432.531	0/0:419:413,0:413:14430:0:0:0,-124.325,-1298.05	0/0:191:189,0:189:6636:0:0:0,-56.8947,-596.894	0/1:151:94,57:94:3294:57:1316:-59.1523,0,-251.229	0/1:119:73,46:73:2560:46:1026:-44.5719,0,-194.827	0/1:13:8,5:8:286:5:110:-4.82818,0,-22.1722	0/0:147:143,0:143:5021:0:0:0,-43.0473,-451.695	0/0:127:127,0:127:4466:0:0:0,-38.2308,-402.117	0/0:360:359,0:359:12592:0:0:0,-108.07,-1132.7	0/0:90:90,0:90:3191:0:0:0,-27.0927,-287.416	0/0:70:70,0:70:2467:0:0:0,-21.0721,-222.286	0/1:85:48,37:48:1696:37:852:-42.9326,0,-127.339	0/0:146:146,0:146:5095:0:0:0,-43.9504,-458.706	0/1:40:18,22:18:640:22:498:-27.3099,0,-45.8886	0/1:66:32,32:32:1138:32:770:-42.6309,0,-83.1326	0/0:82:81,0:81:2860:0:0:0,-24.3834,-257.282	0/0:103:103,0:103:3630:0:0:0,-31.0061,-326.91	0/1:169:101,67:101:3526:67:1569:-74.5501,0,-266.553	0/1:55:12,42:12:417:42:990:-62.9682,0,-21.248	0/0:93:93,0:93:3262:0:0:0,-27.9958,-293.809	0/0:126:126,0:126:4455:0:0:0,-37.9298,-401.127
chr04	15281842	.	GG	TG,TA	449092	PASS	AB=0.494271,0.504796;ABP=5.14995,4.51002;AC=143,45;AF=0.760638,0.239362;AN=188;AO=12575,3825;CIGAR=1X1M,2X;DP=16417;DPB=16419.5;DPRA=0,1.12781;EPP=27309.3,8308.89;EPPR=9.52472;GTI=1;LEN=1,2;MEANALT=1.79787,2.16393;MQM=59.9775,59.6949;MQMR=60;NS=94;NUMALT=2;ODDS=0.145341;PAIRED=0,0;PAIREDR=0;PAO=2.5,2.5;PQA=90,90;PQR=0;PRO=0;QA=446769,134563;QR=98;RO=3;RPL=5904,1809;RPP=104.597,27.3359;RPPR=9.52472;RPR=6671,2016;RUN=1,1;SAF=5904,1809;SAP=104.597,27.3359;SAR=6671,2016;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:70:0,37,33:0:0:37,33:1310,1175:-202.805,-96.0989,-84.9608,-107.061,0,-97.1272	1/1:199:0,199,0:0:0:199,0:7037,0:-633.397,-59.905,0,-633.397,-59.905,-633.397	1/1:341:0,339,1:0:0:339,1:12027,36:-1081.93,-102.049,0,-1078.99,-99.1118,-1078.69	1/1:293:0,291,2:0:0:291,2:10349,64:-931.017,-87.5997,0,-925.861,-82.1237,-925.259	1/1:62:0,58,4:0:0:58,4:2057,144:-185.04,-17.4597,0,-173.29,-5.35024,-172.086	1/1:75:0,75,0:0:0:75,0:2649,0:-238.656,-22.5773,0,-238.656,-22.5773,-238.656	1/2:161:0,70,91:0:0:70,91:2477,3176:-460.424,-258.666,-237.594,-202.11,0,-174.716	1/1:270:0,270,0:0:0:270,0:9603,0:-864.225,-81.2781,0,-864.225,-81.2781,-864.225	1/2:124:0,65,59:0:0:65,59:2325,2075:-358.645,-169.057,-149.49,-189.943,0,-172.182	1/1:238:0,238,0:0:0:238,0:8447,0:-760.236,-71.6451,0,-760.236,-71.6451,-760.236	1/1:202:0,202,0:0:0:202,0:7149,0:-643.459,-60.8081,0,-643.459,-60.8081,-643.459	1/1:196:0,195,0:0:0:195,0:6910,0:-621.721,-58.7009,0,-621.721,-58.7009,-621.721	1/1:207:0,207,0:0:0:207,0:7330,0:-659.754,-62.3132,0,-659.754,-62.3132,-659.754	1/1:203:0,203,0:0:0:203,0:7224,0:-650.216,-61.1091,0,-650.216,-61.1091,-650.216	1/1:179:0,178,1:0:0:178,1:6290,36:-565.838,-53.5833,0,-562.9,-50.2861,-562.599	1/2:166:0,73,93:0:0:73,93:2572,3295:-478.158,-268.756,-246.78,-209.755,0,-181.76	1/1:186:0,185,0:0:0:185,0:6533,0:-587.701,-55.6906,0,-587.701,-55.6906,-587.701	1/2:166:0,84,82:0:0:84,82:2999,2875:-478.794,-234.293,-209.006,-244.855,0,-220.171	1/2:75:0,40,35:0:0:40,35:1419,1233:-216.339,-100.726,-88.6851,-115.965,0,-105.429	1/2:297:0,152,145:0:0:152,145:5427,5158:-863.144,-420.696,-374.939,-442.804,0,-399.155	1/2:282:0,127,154:0:0:127,154:4517,5393:-806.761,-438.647,-400.416,-368.108,0,-321.749	1/2:149:0,57,92:0:0:57,92:2026,3252:-430.273,-265.175,-248.017,-165.453,0,-137.758	1/2:142:0,80,62:0:0:80,62:2851,2187:-410.547,-178.155,-154.073,-232.746,0,-214.082	1/1:145:0,138,7:0:0:138,7:4882,239:-439.194,-41.5421,0,-419.8,-21.8069,-417.693	1/1:151:0,151,0:0:0:151,0:5385,0:-484.782,-45.4555,0,-484.782,-45.4555,-484.782	1/2:427:0,194,233:0:0:194,233:6906,8209:-1231.54,-668.685,-610.285,-563.205,0,-493.065	1/2:450:0,237,213:0:0:237,213:8415,7508:-1297.28,-611.614,-540.27,-686.014,0,-621.895	1/2:106:0,49,57:0:0:49,57:1764,1967:-304.075,-160.135,-145.384,-144.293,0,-127.135	1/2:417:0,223,194:0:0:223,194:7952,6836:-1204.51,-556.287,-489.157,-648.575,0,-590.175	1/2:225:0,111,114:0:0:111,114:3945,3977:-645.169,-323.693,-290.278,-321.828,0,-287.511	1/1:163:0,163,0:0:0:163,0:5737,0:-516.451,-49.0679,0,-516.451,-49.0679,-516.451	1/2:7:0,3,4:0:0:3,4:108,131:-19.7352,-10.9091,-10.006,-9.17208,0,-7.96796	1/2:13:0,5,8:0:0:5,8:180,288:-38.5463,-23.8592,-22.354,-15.0469,0,-12.6387	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:9:0,9,0:0:0:9,0:320,0:-29.1424,-2.70927,0,-29.1424,-2.70927,-29.1424	1/1:37:0,37,0:0:0:37,0:1309,0:-118.11,-11.1381,0,-118.11,-11.1381,-118.11	1/1:333:1,332,0:1:36:332,0:11830,0:-1060.96,-96.6447,0,-1061.26,-99.942,-1064.2	1/1:180:0,180,0:0:0:180,0:6427,0:-578.457,-54.1854,0,-578.457,-54.1854,-578.457	1/2:152:0,77,74:0:0:77,74:2704,2599:-431.695,-211.623,-188.444,-220.171,0,-197.895	1/2:5:0,2,3:0:0:2,3:72,97:-14.0364,-8.1469,-7.54484,-6.23466,0,-5.33157	1/2:321:0,172,149:0:0:172,149:6147,5294:-932.93,-431.738,-379.961,-501.548,0,-456.694	1/2:93:0,44,49:0:0:44,49:1544,1730:-266.502,-140.85,-127.605,-126.003,0,-111.253	1/2:222:0,119,102:0:0:119,102:4230,3614:-638.95,-294.249,-258.426,-344.697,0,-313.991	1/2:145:0,77,68:0:0:77,68:2742,2368:-416.387,-192.896,-169.717,-223.843,0,-203.373	1/1:107:0,106,0:0:0:106,0:3762,0:-338.399,-31.9092,0,-338.399,-31.9092,-338.399	1/2:151:0,83,68:0:0:83,68:2965,2388:-436.381,-194.646,-169.66,-242.03,0,-221.56	1/2:195:0,106,89:0:0:106,89:3738,3125:-559.017,-254.659,-222.75,-304.71,0,-277.918	1/2:279:0,133,145:0:0:133,145:4719,5037:-793.877,-409.396,-369.359,-384.522,0,-340.872	1/2:166:0,86,80:0:0:86,80:3077,2800:-478.996,-228.082,-202.193,-251.268,0,-227.186	1/1:335:0,335,0:0:0:335,0:11935,0:-1074,-100.845,0,-1074,-100.845,-1074	1/1:181:0,180,1:0:0:180,1:6430,36:-578.426,-54.1854,0,-575.488,-50.8882,-575.187	1/1:12:0,12,0:0:0:12,0:428,0:-38.8588,-3.61236,0,-38.8588,-3.61236,-38.8588	1/1:234:0,232,2:0:0:232,2:8228,72:-740.175,-69.839,0,-734.3,-63.6043,-733.698	1/2:68:0,27,41:0:0:27,41:968,1440:-196.505,-117.551,-109.423,-79.3096,0,-66.9673	1/1:21:0,21,0:0:0:21,0:752,0:-68.0063,-6.32163,0,-68.0063,-6.32163,-68.0063	1/2:208:0,106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chr04	17074215	.	AGG	CGG,CGA	268716	PASS	AB=0.49632,0.500599;ABP=3.69746,3.02851;AC=145,43;AF=0.771277,0.228723;AN=188;AO=9576,2941;CIGAR=1X2M,1X1M1X;DP=12581;DPB=12581;DPRA=0,1.10936;EPP=20779.7,6389.31;EPPR=31.2394;GTI=0;LEN=1,3;MEANALT=2,2.2449;MQM=59.9989,59.9704;MQMR=60;NS=94;NUMALT=2;ODDS=0.556774;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=341358,103529;QR=409;RO=13;RPL=2,0;RPP=20779.7,6389.31;RPPR=31.2394;RPR=9574,2941;RUN=1,1;SAF=9576,2941;SAP=20797,6389.31;SAR=0,0;SRF=13;SRP=31.2394;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:41:0,18,23:0:0:18,23:640,792:-116.83,-64.6696,-59.2511,-52.5108,0,-45.5871	1/1:159:1,157,0:1:36:157,0:5605,0:-500.984,-44.3143,0,-501.285,-47.2617,-504.222	1/1:108:1,107,0:1:36:107,0:3794,0:-338.062,-28.913,0,-338.363,-32.2102,-341.301	1/1:362:0,361,0:0:0:361,0:12902,0:-1160.64,-108.672,0,-1160.64,-108.672,-1160.64	1/1:87:0,87,0:0:0:87,0:3116,0:-280.667,-26.1896,0,-280.667,-26.1896,-280.667	1/1:68:0,68,0:0:0:68,0:2435,0:-219.405,-20.47,0,-219.405,-20.47,-219.405	1/2:191:0,114,77:0:0:114,77:4088,2737:-556.826,-223.394,-189.077,-333.788,0,-310.608	1/1:169:0,168,1:0:0:168,1:5978,36:-537.77,-50.573,0,-534.832,-47.2758,-534.531	1/2:101:1,56,44:1:36:56,44:2000,1573:-288.077,-125.319,-111.399,-160.119,0,-149.811	1/1:153:0,152,1:0:0:152,1:5423,36:-487.841,-45.7566,0,-484.904,-42.4593,-484.602	1/1:97:0,95,0:0:0:95,0:3370,0:-303.211,-28.5979,0,-303.211,-28.5979,-303.211	1/1:90:0,90,0:0:0:90,0:3210,0:-289.122,-27.0927,0,-289.122,-27.0927,-289.122	1/1:77:1,74,0:1:36:74,0:2642,0:-234.463,-19.3205,0,-234.764,-22.2762,-237.702	1/1:116:0,116,0:0:0:116,0:4111,0:-370.177,-34.9195,0,-370.177,-34.9195,-370.177	1/1:75:0,75,0:0:0:75,0:2668,0:-240.365,-22.5773,0,-240.365,-22.5773,-240.365	1/2:75:0,33,42:0:0:33,42:1167,1488:-216.619,-121.57,-111.636,-95.4024,0,-82.7592	1/1:81:0,81,0:0:0:81,0:2851,0:-256.827,-24.3834,0,-256.827,-24.3834,-256.827	1/2:72:0,36,35:0:0:36,35:1292,1234:-205.859,-100.468,-89.6305,-105.387,0,-94.8508	1/2:47:0,22,25:0:0:22,25:779,882:-135.628,-72.1718,-65.5491,-63.8094,0,-56.2837	1/2:308:1,184,122:1:21:184,122:6536,4311:-881.855,-349.573,-295.771,-531.063,0,-495.926	1/2:198:0,102,96:0:0:102,96:3625,3403:-572.983,-277.587,-246.882,-295.751,0,-266.852	1/2:176:0,45,131:0:0:45,131:1608,4615:-507.194,-376.086,-362.539,-131.464,0,-92.0288	1/2:137:0,80,57:0:0:80,57:2821,2013:-393.978,-164.283,-140.2,-230.048,0,-212.889	1/1:203:0,194,9:0:0:194,9:6912,307:-621.81,-58.3998,0,-596.901,-33.1494,-594.192	1/1:91:0,90,0:0:0:90,0:3198,0:-287.684,-27.0927,0,-287.684,-27.0927,-287.684	1/2:460:1,242,214:1:29:242,214:8618,7519:-1311.81,-609.693,-539.152,-700.119,0,-638.007	1/2:237:0,129,108:0:0:129,108:4592,3822:-685.928,-311.668,-272.835,-374.615,0,-342.104	1/1:37:0,35,0:0:0:35,0:1256,0:-112.995,-10.5361,0,-112.995,-10.5361,-112.995	1/2:433:0,218,214:0:0:218,214:7786,7544:-1249.02,-614.23,-548.606,-634.787,0,-570.366	1/2:197:0,85,110:0:0:85,110:3048,3894:-565.791,-317.185,-291.598,-248.602,0,-215.489	1/1:174:0,174,0:0:0:174,0:6166,0:-555.045,-52.3792,0,-555.045,-52.3792,-555.045	1/2:8:0,7,1:0:0:7,1:248,34:-23.3132,-3.09788,-0.990671,-20.557,0,-20.256	1/2:12:0,5,7:0:0:5,7:180,248:-35.2467,-20.5572,-19.052,-15.0469,0,-12.9397	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:10:0,10,0:0:0:10,0:352,0:-32.0182,-3.0103,0,-32.0182,-3.0103,-32.0182	1/1:9:0,9,0:0:0:9,0:320,0:-29.1424,-2.70927,0,-29.1424,-2.70927,-29.1424	1/1:185:1,183,0:1:27:183,0:6536,0:-585.577,-53.0046,0,-585.878,-55.0885,-588.007	1/1:314:0,311,0:0:0:311,0:11075,0:-996.288,-93.6203,0,-996.288,-93.6203,-996.288	1/2:83:0,46,37:0:0:46,37:1631,1298:-238.86,-105.982,-92.1342,-133.231,0,-122.093	1/2:4:0,2,2:0:0:2,2:68,49:-9.6157,-4.05248,-3.45042,-5.85565,0,-5.25359	1/2:180:0,80,99:0:0:80,99:2855,3479:-515.912,-283.161,-259.078,-232.745,0,-202.943	1/1:55:0,54,0:0:0:54,0:1932,0:-173.797,-16.2556,0,-173.797,-16.2556,-173.797	1/2:207:0,106,101:0:0:106,101:3747,3518:-591.547,-286.373,-254.463,-305.525,0,-275.121	1/2:94:0,50,44:0:0:50,44:1783,1533:-270.36,-125.012,-109.96,-145.701,0,-132.455	1/1:94:1,93,0:1:36:93,0:3296,0:-293.261,-24.6985,0,-293.562,-27.9958,-296.499	1/2:102:0,53,49:0:0:53,49:1883,1727:-294.403,-140.964,-125.009,-153.793,0,-139.043	1/2:119:0,66,53:0:0:66,53:2340,1850:-341.462,-150.821,-130.953,-190.992,0,-175.037	1/2:251:0,137,114:0:0:137,114:4896,3983:-723.544,-324.345,-283.104,-399.552,0,-365.234	1/1:181:0,181,0:0:0:181,0:6464,0:-581.848,-54.4864,0,-581.848,-54.4864,-581.848	1/1:217:0,215,0:0:0:215,0:7675,0:-690.427,-64.7215,0,-690.427,-64.7215,-690.427	1/1:293:0,292,1:0:0:292,1:10398,36:-935.389,-87.9008,0,-932.451,-84.6035,-932.15	1/1:7:0,7,0:0:0:7,0:248,0:-22.6642,-2.10721,0,-22.6642,-2.10721,-22.6642	1/1:208:0,207,0:0:0:207,0:7419,0:-667.394,-62.3132,0,-667.394,-62.3132,-667.394	1/2:72:0,27,45:0:0:27,45:972,1560:-206.448,-127.132,-119.005,-79.6701,0,-66.1237	1/1:8:0,8,0:0:0:8,0:284,0:-25.9034,-2.40824,0,-25.9034,-2.40824,-25.9034	1/2:181:1,120,59:1:36:120,59:4270,2080:-514.162,-166.459,-133.273,-34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chr04	17450267	.	G	A	44264.5	PASS	AB=0.506857;ABP=5.09498;AC=42;AF=0.223404;AN=188;AO=2605;CIGAR=1X;DP=11133;DPB=11133;DPRA=1.20848;EPP=5651.01;EPPR=18412.9;GTI=0;LEN=1;MEANALT=1.02;MQM=59.9678;MQMR=59.8327;NS=94;NUMALT=1;ODDS=3.80115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93396;QR=304089;RO=8526;RPL=1;RPP=5651.01;RPPR=18412.9;RPR=2604;RUN=1;SAF=2605;SAP=5659.7;SAR=0;SRF=8526;SRP=18517;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:33,24:33:1161:24:864:-60.9239,0,-87.6327	0/0:192:192,0:192:6871:0:0:0,-57.7978,-617.654	0/0:130:130,0:130:4656:0:0:0,-39.1339,-419.182	0/0:226:226,0:226:8047:0:0:0,-68.0328,-724.201	0/0:115:114,1:114:4068:1:36:0,-31.0202,-362.627	0/0:76:76,0:76:2708:0:0:0,-22.8783,-243.96	0/1:136:62,74:62:2215:74:2654:-198.166,0,-158.673	0/0:293:293,0:293:10452:0:0:0,-88.2018,-940.559	0/1:91:33,58:33:1172:58:2080:-160.077,0,-78.3844	0/0:131:131,0:131:4652:0:0:0,-39.4349,-418.756	0/0:60:60,0:60:2140:0:0:0,-18.0618,-192.862	0/0:88:88,0:88:3118:0:0:0,-26.4906,-280.835	0/0:71:71,0:71:2540:0:0:0,-21.3731,-228.839	0/0:81:81,0:81:2888:0:0:0,-24.3834,-260.077	0/0:76:76,0:76:2712:0:0:0,-22.8783,-244.323	0/1:70:29,41:29:1036:41:1476:-112.064,0,-72.412	0/0:86:86,0:86:3067:0:0:0,-25.8886,-276.246	0/1:63:39,24:39:1396:24:859:-58.6667,0,-106.974	0/1:49:24,25:24:847:25:896:-66.2099,0,-61.7949	0/1:214:124,90:124:4435:90:3236:-227.04,0,-334.899	0/1:153:79,74:79:2820:74:2662:-193.768,0,-207.98	0/1:212:68,144:68:2431:144:5176:-402.159,0,-155.227	0/1:42:26,16:26:920:16:576:-39.5317,0,-70.4288	0/0:151:145,5:145:5172:5:180:0,-28.9621,-449.062	0/0:109:109,0:109:3908:0:0:0,-32.8123,-351.877	0/1:455:236,219:236:8451:219:7828:-567.58,0,-623.577	0/1:166:67,99:67:2392:99:3556:-270.275,0,-165.563	0/0:48:47,0:47:1680:0:0:0,-14.1484,-151.124	0/1:349:161,188:161:5752:188:6744:-501.968,0,-412.706	0/1:197:100,97:100:3562:97:3478:-253.858,0,-261.482	0/0:134:133,1:133:4715:1:36:0,-36.7397,-420.91	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9812	0/1:12:10,2:10:356:2:72:-3.22436,0,-28.7673	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:5:5,0:5:172:0:0:0,-1.50515,-15.818	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5025	0/0:262:262,0:262:9349:0:0:0,-78.8699,-841.236	0/0:265:265,0:265:9448:0:0:0,-79.7729,-850.26	0/1:73:39,34:39:1400:34:1216:-87.7714,0,-104.313	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:159:75,84:75:2676:84:3020:-224.166,0,-193.217	0/0:40:40,0:40:1427:0:0:0,-12.0412,-128.724	0/1:143:60,83:60:2148:83:2964:-223.946,0,-150.536	0/1:97:48,49:48:1711:49:1760:-129.257,0,-125.074	0/0:85:85,0:85:3006:0:0:0,-25.5875,-270.769	0/1:95:47,48:47:1663:48:1724:-126.848,0,-121.358	0/1:191:102,89:102:3655:89:3180:-228.924,0,-271.496	0/1:309:158,151:158:5620:151:5424:-395.269,0,-412.887	0/0:132:131,1:131:4679:1:36:0,-36.1377,-417.67	0/0:206:205,1:205:7310:1:36:0,-58.4143,-654.238	0/0:163:163,0:163:5810:0:0:0,-49.0679,-523.014	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:118:118,0:118:4220:0:0:0,-35.5215,-379.961	0/1:59:33,26:33:1176:26:932:-66.4381,0,-88.387	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6419	0/1:146:78,68:78:2799:68:2444:-176.264,0,-208.197	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:25:10,15:10:356:15:540:-41.4108,0,-24.8555	0/1:83:39,44:39:1383:44:1575:-117.055,0,-99.781	0/0:134:134,0:134:4779:0:0:0,-40.338,-430.266	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4592	0/1:241:128,113:128:4553:113:4052:-292.318,0,-337.369	0/0:293:288,5:288:10266:5:176:0,-72.0632,-907.713	0/1:103:60,43:60:2147:43:1516:-105.726,0,-162.483	0/0:131:131,0:131:4625:0:0:0,-39.4349,-416.37	0/1:138:71,67:71:2536:67:2397:-174.445,0,-186.949	0/1:103:39,64:39:1387:64:2296:-175.895,0,-94.1213	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:110:110,0:110:3943:0:0:0,-33.1133,-355.043	0/0:117:117,0:117:4180:0:0:0,-35.2205,-376.383	0/1:22:17,5:17:612:5:180:-9.9294,0,-48.7908	0/0:148:148,0:148:5275:0:0:0,-44.5524,-474.765	0/1:53:22,31:22:788:31:1116:-84.7971,0,-55.2868	0/0:168:168,0:168:5978:0:0:0,-50.573,-538.041	0/0:248:248,0:248:8832:0:0:0,-74.6554,-794.866	0/1:209:115,94:115:4108:94:3380:-241.499,0,-306.851	0/1:121:53,68:53:1892:68:2406:-180.368,0,-134.134	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/0:116:113,3:113:4027:3:104:0,-25.2167,-352.871	0/0:128:128,0:128:4568:0:0:0,-38.5318,-411.234	0/0:229:229,0:229:8170:0:0:0,-68.9359,-735.313	0/0:129:129,0:129:4620:0:0:0,-38.8329,-415.962	0/0:94:94,0:94:3343:0:0:0,-28.2968,-301.087	0/1:97:49,48:49:1726:48:1728:-126.605,0,-126.378	0/0:191:190,1:190:6751:1:36:0,-53.8985,-604.065	0/1:46:26,20:26:923:20:720:-51.2814,0,-69.5327	0/1:85:40,45:40:1436:45:1613:-119.872,0,-103.947	0/0:86:86,0:86:3084:0:0:0,-25.8886,-277.142	0/0:39:39,0:39:1388:0:0:0,-11.7402,-125.2	0/1:120:61,59:61:2196:59:2124:-155.305,0,-161.778	0/1:86:36,50:36:1284:50:1788:-135.314,0,-89.9709	0/0:90:90,0:90:3188:0:0:0,-27.0927,-287.146	0/0:121:121,0:121:4328:0:0:0,-36.4246,-389.694
chr04	17450283	.	A	C	174513	PASS	AB=0.489796;ABP=7.57482;AC=146;AF=0.776596;AN=188;AO=8394;CIGAR=1X;DP=10986;DPB=10986;DPRA=0;EPP=18221.7;EPPR=5629.3;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.8295;MQMR=59.9618;NS=94;NUMALT=1;ODDS=2.50668;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=295925;QR=92821;RO=2591;RPL=8393;RPP=18221.7;RPPR=5629.3;RPR=1;RUN=1;SAF=8394;SAP=18230.3;SAR=0;SRF=2591;SRP=5629.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:22,32:22:792:32:1136:-86.2899,0,-55.3501	1/1:188:0,188:0:0:188:6636:-597.295,-56.5936,0	1/1:124:0,124:0:0:124:4370:-393.464,-37.3277,0	1/1:220:0,220:0:0:220:7803:-702.26,-66.2266,0	1/1:110:1,109:1:36:109:3844:-342.543,-29.515,0	1/1:77:0,77:0:0:77:2743:-247.105,-23.1793,0	0/1:135:72,63:72:2592:63:2235:-160.773,0,-192.889	1/1:289:0,289:0:0:289:10214:-919.151,-86.9977,0	0/1:93:58,35:58:2071:35:1240:-83.7882,0,-158.664	1/1:135:0,135:0:0:135:4754:-427.933,-40.6391,0	1/1:56:0,56:0:0:56:1961:-176.76,-16.8577,0	1/1:87:0,87:0:0:87:3077:-277.113,-26.1896,0	1/1:71:0,71:0:0:71:2484:-223.799,-21.3731,0	1/1:79:0,79:0:0:79:2793:-251.536,-23.7814,0	1/1:73:0,73:0:0:73:2546:-229.39,-21.9752,0	0/1:66:40,26:40:1428:26:904:-61.8039,0,-108.95	1/1:82:0,82:0:0:82:2810:-253.123,-24.6845,0	0/1:63:24,39:24:860:39:1350:-102.829,0,-58.7569	0/1:47:25,22:25:892:22:764:-54.927,0,-66.4513	0/1:208:87,121:87:3124:121:4311:-325.552,0,-218.771	0/1:148:73,75:73:2612:75:2648:-194.012,0,-190.548	0/1:214:143,71:143:5116:71:2515:-162.182,0,-396.163	0/1:42:16,26:16:576:26:904:-68.9837,0,-39.5313	1/1:157:6,151:6:216:151:5289:-456.351,-27.4712,0	1/1:108:0,108:0:0:108:3791:-341.385,-32.5112,0	0/1:445:216,229:216:7730:229:8089:-594.078,0,-561.773	0/1:165:100,65:100:3596:65:2336:-160.826,0,-274.174	1/1:49:0,49:0:0:49:1676:-151.117,-14.7505,0	0/1:350:188,162:188:6752:162:5691:-406.95,0,-502.386	0/1:195:96,99:96:3448:99:3508:-257.226,0,-251.761	1/1:130:1,129:1:36:129:4575:-408.315,-35.5356,0	1/1:11:0,11:0:0:11:383:-34.8026,-3.31133,0	0/1:11:2,9:2:72:9:312:-25.1034,0,-3.52539	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:9:0,9:0:0:9:309:-28.1373,-2.70927,0	1/1:261:0,261:0:0:261:9175:-825.594,-78.5688,0	1/1:267:0,267:0:0:267:9408:-846.673,-80.375,0	0/1:73:34,39:34:1212:39:1392:-103.593,0,-87.4111	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:159:85,74:85:3037:74:2606:-186.913,0,-225.695	1/1:40:0,40:0:0:40:1397:-126.022,-12.0412,0	0/1:145:85,60:85:3040:60:2131:-148.405,0,-230.181	0/1:98:53,45:53:1888:45:1565:-111.634,0,-140.47	1/1:86:0,86:0:0:86:2976:-268.066,-25.8886,0	0/1:94:48,46:48:1716:46:1617:-117.52,0,-126.429	0/1:189:86,103:86:3080:103:3641:-270.898,0,-220.534	0/1:303:151,152:151:5407:152:5404:-395.263,0,-395.541	1/1:130:1,129:1:36:129:4571:-407.956,-35.5356,0	1/1:201:0,201:0:0:201:7129:-641.597,-60.507,0	1/1:163:0,163:0:0:163:5741:-516.496,-49.0679,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:119:0,119:0:0:119:4206:-378.705,-35.8226,0	0/1:60:25,34:25:892:34:1196:-89.8222,0,-62.4792	1/1:21:0,21:0:0:21:739:-66.829,-6.32163,0	0/1:145:68,77:68:2448:77:2734:-202.652,0,-176.925	1/1:18:0,18:0:0:18:631:-57.1157,-5.41854,0	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/1:27:16,11:16:576:11:383:-26.6753,0,-44.0472	0/1:78:42,36:42:1512:36:1284:-92.3815,0,-112.888	1/1:135:0,135:0:0:135:4734:-426.218,-40.6391,0	1/1:14:0,14:0:0:14:485:-43.9766,-4.21442,0	0/1:236:114,122:114:4065:122:4269:-313.331,0,-294.993	1/1:286:3,283:3:108:283:10027:-892.247,-76.0194,0	0/1:103:42,61:42:1508:61:2161:-163.742,0,-105.008	1/1:132:0,132:0:0:132:4680:-421.316,-39.736,0	0/1:139:66,73:66:2372:73:2572:-189.886,0,-171.895	0/1:105:65,40:65:2332:40:1423:-96.7578,0,-178.531	1/1:16:0,16:0:0:16:564:-51.0903,-4.81648,0	1/1:108:0,108:0:0:108:3835:-345.33,-32.5112,0	1/1:113:0,113:0:0:113:3952:-355.873,-34.0164,0	0/1:21:5,16:5:171:16:572:-45.4918,0,-9.40382	1/1:144:0,144:0:0:144:5078:-457.11,-43.3483,0	0/1:53:31,22:31:1116:22:788:-55.2868,0,-84.7971	1/1:160:0,160:0:0:160:5657:-509.227,-48.1648,0	1/1:249:0,249:0:0:249:8792:-791.276,-74.9565,0	0/1:203:93,110:93:3340:110:3867:-287.073,0,-239.707	0/1:119:67,52:67:2392:52:1827:-128.886,0,-179.714	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	1/1:115:4,111:4:144:111:3929:-340.451,-21.3048,0	1/1:121:0,121:0:0:121:4278:-385.082,-36.4246,0	1/1:223:0,223:0:0:223:7914:-712.287,-67.1297,0	1/1:125:0,125:0:0:125:4378:-394.194,-37.6288,0	1/1:93:0,93:0:0:93:3219:-289.93,-27.9958,0	0/1:95:46,49:46:1640:49:1702:-124.816,0,-119.291	1/1:187:1,186:1:36:186:6520:-583.293,-52.6943,0	0/1:44:19,25:19:684:25:864:-64.8203,0,-48.645	0/1:87:46,41:46:1652:41:1437:-103.433,0,-122.779	1/1:85:0,85:0:0:85:2993:-269.568,-25.5876,0	1/1:39:0,39:0:0:39:1330:-119.972,-11.7402,0	0/1:118:59,59:59:2115:59:2086:-152.485,0,-155.097	0/1:83:52,31:52:1849:31:1116:-75.7623,0,-141.703	1/1:87:0,87:0:0:87:3078:-277.248,-26.1896,0	1/1:120:0,120:0:0:120:4219:-379.888,-36.1236,0
chr04	17450299	.	AATA	CATG	178647	PASS	AB=0.490987;ABP=6.65075;AC=146;AF=0.776596;AN=188;AO=8610;CIGAR=1X2M1X;DP=11272;DPB=11279;DPRA=0;EPP=18699.4;EPPR=5685.75;GTI=0;LEN=4;MEANALT=1.45745;MQM=59.817;MQMR=59.9645;NS=94;NUMALT=1;ODDS=4.04905;PAIRED=0;PAIREDR=0;PAO=21;PQA=724;PQR=0;PRO=7;QA=303176;QR=91558;RO=2617;RPL=8610;RPP=18699.4;RPPR=5685.75;RPR=0;RUN=1;SAF=8610;SAP=18699.4;SAR=0;SRF=2617;SRP=5685.75;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:24,33:24:855:33:1143:-86.0108,0,-60.1122	1/1:193:0,192:0:0:192:6785:-609.718,-57.7978,0	1/1:132:0,131:0:0:131:4609:-414.661,-39.4349,0	1/1:230:0,228:0:0:228:7993:-719.066,-68.6348,0	1/1:113:1,112:1:35:112:3980:-354.891,-30.8527,0	1/1:78:0,78:0:0:78:2760:-248.638,-23.4803,0	0/1:138:74,63:74:2587:63:2204:-157.022,0,-191.481	1/1:290:0,289:0:0:289:10172:-915.128,-86.9977,0	0/1:93:58,35:58:2019:35:1230:-82.9932,0,-153.988	1/1:137:0,137:0:0:137:4821:-434.031,-41.2411,0	1/1:60:0,60:0:0:60:2096:-188.906,-18.0618,0	1/1:88:0,88:0:0:88:3102:-279.386,-26.4906,0	1/1:70:0,70:0:0:70:2487:-224.072,-21.0721,0	1/1:81:0,79:0:0:79:2775:-249.562,-23.7814,0	1/1:77:0,77:0:0:77:2700:-243.245,-23.1793,0	0/1:71:41,30:41:1457:30:1044:-72.8383,0,-110.053	1/1:85:0,85:0:0:85:2988:-269.141,-25.5876,0	0/1:62:24,38:24:841:38:1335:-101.785,0,-57.3428	0/1:49:24,24:24:836:24:846:-61.6473,0,-60.7471	0/1:217:91,126:91:3193:126:4463:-336.519,0,-222.272	0/1:153:74,79:74:2592:79:2771:-203.571,0,-187.403	0/1:215:145,70:145:5063:70:2448:-155.54,0,-390.794	0/1:45:18,27:18:633:27:923:-69.7872,0,-43.7504	1/1:158:6,151:6:213:151:5322:-459.596,-28.1043,0	1/1:112:0,112:0:0:112:3960:-356.523,-33.7154,0	0/1:463:220,243:220:7683:243:8551:-629.892,0,-551.837	0/1:167:101,65:101:3520:65:2301:-157.019,0,-266.685	1/1:48:0,48:0:0:48:1706:-153.823,-14.4494,0	0/1:350:187,163:187:6549:163:5743:-411.601,0,-484.15	0/1:196:97,99:97:3384:99:3458:-252.246,0,-245.587	1/1:135:1,134:1:36:134:4688:-418.488,-37.0408,0	1/1:11:0,11:0:0:11:386:-35.0738,-3.31133,0	0/1:12:2,10:2:72:10:359:-29.0397,0,-3.22436	1/1:6:0,6:0:0:6:214:-19.6078,-1.80618,0	1/1:5:0,5:0:0:5:167:-15.3587,-1.50515,0	1/1:9:0,9:0:0:9:314:-28.5935,-2.70927,0	1/1:267:0,266:0:0:266:9388:-844.484,-80.074,0	1/1:271:0,270:0:0:270:9498:-854.569,-81.2781,0	0/1:72:34,38:34:1188:38:1350:-100.116,0,-85.55	0/1:9:3,6:3:97:6:216:-17.0812,0,-6.34072	0/1:159:83,75:83:2886:75:2646:-190.539,0,-212.175	1/1:40:0,39:0:0:39:1383:-124.406,-11.7402,0	0/1:145:83,61:83:2870:61:2166:-151.494,0,-214.832	0/1:100:51,49:51:1775:49:1715:-124.531,0,-129.738	1/1:86:0,85:0:0:85:2993:-269.283,-25.5876,0	0/1:97:48,49:48:1678:49:1720:-125.541,0,-121.763	0/1:191:88,102:88:3074:102:3613:-267.758,0,-219.375	0/1:310:150,155:150:5270:155:5469:-400.189,0,-382.291	1/1:130:1,129:1:36:129:4584:-409.127,-35.8955,0	1/1:211:0,211:0:0:211:7437:-669.327,-63.5173,0	1/1:169:0,169:0:0:169:5934:-532.732,-50.8741,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:121:0,121:0:0:121:4256:-383.202,-36.4246,0	0/1:60:26,33:26:925:33:1170:-87.5646,0,-65.5245	1/1:20:0,20:0:0:20:704:-63.3594,-6.0206,0	0/1:147:69,78:69:2414:78:2772:-205.47,0,-173.265	1/1:22:0,22:0:0:22:759:-68.6272,-6.62266,0	0/1:14:4,10:4:141:10:360:-28.5299,0,-8.82261	0/1:27:16,11:16:563:11:390:-27.3106,0,-42.8715	0/1:84:44,37:44:1533:37:1295:-92.1213,0,-113.528	1/1:135:0,134:0:0:134:4718:-424.578,-40.338,0	1/1:14:0,14:0:0:14:499:-45.2457,-4.21442,0	0/1:241:114,125:114:3968:125:4439:-327.304,0,-285.013	1/1:298:3,294:3:108:294:10414:-927.135,-79.6206,0	0/1:108:44,63:44:1552:63:2220:-167.485,0,-107.401	1/1:135:0,135:0:0:135:4616:-415.599,-40.6391,0	0/1:141:67,73:67:2358:73:2598:-191.664,0,-170.075	0/1:104:64,39:64:2244:39:1364:-91.6906,0,-170.857	1/1:18:0,18:0:0:18:627:-56.7542,-5.41854,0	1/1:110:0,110:0:0:110:3876:-349.022,-33.1133,0	1/1:118:0,118:0:0:118:4133:-371.827,-35.5215,0	0/1:22:5,17:5:178:17:598:-47.5246,0,-9.74599	1/1:147:0,147:0:0:147:5182:-466.487,-44.2514,0	0/1:53:31,22:31:1092:22:781:-54.6552,0,-82.6347	1/1:169:0,169:0:0:169:5952:-535.772,-50.8741,0	1/1:257:0,256:0:0:256:9016:-811.168,-77.0637,0	0/1:215:99,116:99:3440:116:4037:-298.755,0,-245.098	0/1:122:68,53:68:2392:53:1876:-132.366,0,-178.788	0/1:11:7,4:7:235:4:144:-10.0023,0,-18.1668	1/1:119:3,116:3:106:116:4104:-359.615,-25.9334,0	1/1:131:0,130:0:0:130:4584:-412.443,-39.1339,0	1/1:233:0,232:0:0:232:8165:-734.244,-69.839,0	1/1:130:0,130:0:0:130:4570:-411.472,-39.1339,0	1/1:94:0,94:0:0:94:3289:-296.233,-28.2968,0	0/1:98:47,50:47:1644:50:1759:-128.988,0,-118.687	1/1:193:1,189:1:33:189:6653:-595.537,-54.234,0	0/1:46:19,26:19:676:26:921:-69.2954,0,-47.262	0/1:88:46,42:46:1608:42:1467:-105.828,0,-118.518	1/1:86:0,86:0:0:86:3054:-274.831,-25.8886,0	1/1:40:0,40:0:0:40:1387:-125.12,-12.0412,0	0/1:119:59,59:59:2102:59:2096:-153.065,0,-153.608	0/1:88:52,35:52:1804:35:1218:-83.3702,0,-136.09	1/1:90:0,90:0:0:90:3158:-284.263,-27.0927,0	1/1:125:0,125:0:0:125:4423:-398.243,-37.6288,0
chr04	17450305	.	G	C	57471.8	PASS	AB=0.449447;ABP=165.695;AC=42;AF=0.223404;AN=188;AO=3315;CIGAR=1X;DP=16651;DPB=16651;DPRA=1.10782;EPP=7201.44;EPPR=28946.6;GTI=2;LEN=1;MEANALT=1.07843;MQM=51.2534;MQMR=52.7598;NS=94;NUMALT=1;ODDS=2.5084;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117550;QR=473962;RO=13329;RPL=2592;RPP=2291.19;RPPR=1949.96;RPR=723;RUN=1;SAF=2592;SAP=2291.19;SAR=723;SRF=8393;SRP=1949.96;SRR=4936;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:38,23:38:1327:23:805:-54.4047,0,-100.783	0/0:237:237,0:237:8434:0:0:0,-71.3441,-753.033	0/0:261:261,0:261:9327:0:0:0,-78.5688,-823.646	0/0:330:328,1:328:11686:1:32:0,-96.1707,-1039.39	0/0:150:148,1:148:5263:1:36:0,-41.615,-462.938	0/0:100:100,0:100:3584:0:0:0,-30.103,-320.091	0/1:168:75,93:75:2660:93:3289:-220.252,0,-188.009	0/0:404:404,0:404:14349:0:0:0,-121.616,-1271.64	0/1:125:70,55:70:2491:55:1909:-134.457,0,-182.346	0/0:200:200,0:200:7101:0:0:0,-60.206,-631.431	0/0:111:111,0:111:3953:0:0:0,-33.4143,-350.587	0/0:194:194,0:194:6884:0:0:0,-58.3998,-607.255	0/0:135:135,0:135:4812:0:0:0,-40.639,-426.103	0/0:131:130,1:130:4620:1:34:0,-36.036,-405.713	0/0:149:149,0:149:5319:0:0:0,-44.8535,-471.945	0/1:92:51,41:51:1820:41:1455:-103.55,0,-133.552	0/0:116:116,0:116:4139:0:0:0,-34.9195,-366.411	0/1:70:47,23:47:1680:23:824:-53.4112,0,-129.248	0/1:59:34,25:34:1199:25:874:-61.2144,0,-89.1454	0/1:331:197,134:197:7021:134:4779:-264.652,0,-525.226	0/1:194:121,73:121:4300:73:2579:-173.854,0,-323.337	0/1:286:94,192:94:3350:192:6807:-459.61,0,-212.622	0/1:89:52,37:52:1818:37:1311:-63.9035,0,-134.757	0/0:174:168,6:168:5986:6:212:0,-32.9544,-516.967	0/0:189:189,0:189:6726:0:0:0,-56.8947,-594.435	0/1:658:339,319:339:12066:319:11371:-676.129,0,-874.541	0/1:256:155,101:155:5519:101:3578:-245.161,0,-406.524	0/0:83:83,0:83:2929:0:0:0,-24.9855,-259.134	0/1:505:234,271:234:8342:271:9657:-599.683,0,-590.879	0/1:222:130,92:130:4618:92:3265:-227.242,0,-344.667	0/0:181:179,1:179:6300:1:36:0,-50.9382,-558.206	0/0:11:11,0:11:377:0:0:0,-3.31133,-34.2579	0/1:16:14,2:14:491:2:72:-2.02024,0,-39.1623	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:17:17,0:17:612:0:0:0,-5.11751,-53.4608	0/0:17:17,0:17:608:0:0:0,-5.11751,-54.0662	0/0:459:456,0:456:16208:0:0:0,-137.27,-1430.42	0/0:345:345,0:345:12264:0:0:0,-103.855,-1093.33	0/1:97:64,33:64:2284:33:1158:-75.3251,0,-174.096	0/1:10:7,3:7:252:3:108:-7.06487,0,-19.8872	0/1:205:120,85:120:4238:85:2988:-207.44,0,-313.249	0/0:75:75,0:75:2684:0:0:0,-22.5772,-235.994	0/1:204:122,82:122:4345:82:2927:-202.254,0,-321.256	0/1:147:74,73:74:2639:73:2598:-156.982,0,-191.358	0/0:136:136,0:136:4797:0:0:0,-40.9401,-427.637	0/1:216:108,108:108:3850:108:3804:-194.52,0,-273.378	0/1:250:162,88:162:5777:88:3107:-204.6,0,-438.134	0/1:428:217,211:217:7686:211:7444:-454.962,0,-557.829	0/0:242:241,1:241:8627:1:36:0,-69.251,-761.19	0/0:286:286,0:286:10172:0:0:0,-86.0946,-907.51	0/0:238:238,0:238:8469:0:0:0,-71.6451,-751.216	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.6308	0/0:194:194,0:194:6926:0:0:0,-58.3998,-612.659	0/1:99:51,48:51:1812:48:1720:-93.6985,0,-131.906	0/0:22:22,0:22:788:0:0:0,-6.62266,-70.2523	0/1:194:128,66:128:4588:66:2344:-152.82,0,-347.368	0/0:46:46,0:46:1631:0:0:0,-13.8474,-144.41	0/1:23:19,4:19:671:4:144:-6.38993,0,-52.989	0/1:41:19,22:19:671:22:784:-49.8095,0,-46.5102	0/1:164:121,43:121:4305:43:1524:-88.078,0,-326.896	0/0:216:216,0:216:7693:0:0:0,-65.0225,-682.696	0/0:18:18,0:18:636:0:0:0,-5.41854,-56.7279	0/1:342:187,155:187:6681:155:5486:-333.692,0,-489.954	0/0:428:422,6:422:15000:6:216:0,-113.475,-1322.83	0/1:134:90,44:90:3220:44:1537:-98.2787,0,-246.335	0/0:181:181,0:181:6369:0:0:0,-54.4864,-566.363	0/1:243:131,112:131:4654:112:4016:-219.248,0,-340.395	0/1:240:90,150:90:3214:150:5334:-287.536,0,-212.879	0/0:58:58,0:58:2069:0:0:0,-17.4597,-181.413	0/0:152:152,0:152:5412:0:0:0,-45.7566,-482.149	0/0:159:159,0:159:5641:0:0:0,-47.8638,-503.642	0/1:34:25,9:25:880:9:306:-11.7699,0,-68.5975	0/0:253:253,0:253:9007:0:0:0,-76.1606,-797.719	0/1:86:55,31:55:1968:31:1103:-73.6912,0,-147.961	0/0:229:229,0:229:8111:0:0:0,-68.9359,-721.335	0/0:310:310,0:310:11042:0:0:0,-93.3193,-985.607	0/1:263:166,97:166:5915:97:3467:-233.071,0,-446.79	0/1:157:90,67:90:3213:67:2367:-166.026,0,-237.491	0/1:13:6,7:6:216:7:239:-17.9293,0,-15.4466	0/0:186:183,3:183:6443:3:104:0,-46.2888,-560.2	0/0:240:240,0:240:8580:0:0:0,-72.2472,-759.216	0/0:382:382,0:382:13550:0:0:0,-114.993,-1202.26	0/0:193:193,0:193:6875:0:0:0,-58.0988,-612.205	0/0:152:152,0:152:5379:0:0:0,-45.7566,-479	0/1:135:71,64:71:2519:64:2249:-139.919,0,-184.591	0/0:304:302,1:302:10688:1:36:0,-87.9649,-947.44	0/1:59:39,20:39:1384:20:716:-47.0069,0,-105.726	0/1:119:74,45:74:2628:45:1576:-106.305,0,-196.955	0/0:160:160,0:160:5724:0:0:0,-48.1648,-505.804	0/0:64:64,0:64:2279:0:0:0,-19.2659,-201.004	0/1:151:93,58:93:3312:58:2056:-139.853,0,-247.936	0/1:143:55,88:55:1935:88:3131:-187.465,0,-129.941	0/0:149:149,0:149:5264:0:0:0,-44.8535,-468.773	0/0:230:230,0:230:8170:0:0:0,-69.2369,-725.606
chr04	17937484	.	G	C	33929.9	PASS	AB=0.516541;ABP=12.1334;AC=44;AF=0.234043;AN=188;AO=1999;CIGAR=1X;DP=8005;DPB=8005;DPRA=1.14805;EPP=4343.78;EPPR=13038.4;GTI=1;LEN=1;MEANALT=1.04167;MQM=59.8899;MQMR=59.9855;NS=94;NUMALT=1;ODDS=4.68386;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71535;QR=213846;RO=6003;RPL=0;RPP=4343.78;RPPR=13038.4;RPR=1999;RUN=1;SAF=1999;SAP=4343.78;SAR=0;SRF=6003;SRP=13038.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:26,24:26:913:24:860:-62.6622,0,-67.4325	0/0:149:147,2:147:5234:2:57:0,-39.4402,-465.784	0/0:139:139,0:139:4976:0:0:0,-41.8432,-447.989	0/0:183:183,0:183:6458:0:0:0,-55.0885,-581.307	0/0:72:69,3:69:2468:3:104:0,-11.9714,-212.671	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:36:23,13:23:816:13:468:-31.6226,0,-62.9246	0/0:152:151,0:151:5371:0:0:0,-45.4555,-483.16	0/1:53:23,30:23:828:30:1080:-81.5587,0,-58.8895	0/0:75:75,0:75:2669:0:0:0,-22.5772,-240.454	0/0:113:113,0:113:4037:0:0:0,-34.0164,-363.517	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/0:61:61,0:61:2181:0:0:0,-18.3628,-196.554	0/0:88:88,0:88:3133:0:0:0,-26.4906,-282.195	0/0:55:55,0:55:1949:0:0:0,-16.5566,-175.684	0/1:52:29,23:29:1036:23:828:-59.1906,0,-77.9004	0/0:44:44,0:44:1561:0:0:0,-13.2453,-140.78	0/1:23:13,10:13:449:10:360:-25.8206,0,-33.8138	0/1:42:21,21:21:756:21:743:-54.5497,0,-55.724	0/1:202:111,91:111:3957:91:3248:-231.733,0,-295.513	0/1:114:64,50:64:2285:50:1782:-126.317,0,-171.593	0/1:108:30,78:30:1064:78:2767:-216.762,0,-63.5604	0/1:80:55,25:55:1957:25:896:-56.878,0,-152.275	0/0:31:29,2:29:1025:2:72:0,-2.50005,-85.7288	0/0:113:113,0:113:4056:0:0:0,-34.0164,-365.226	0/1:166:92,74:92:3289:74:2633:-187.16,0,-246.257	0/1:226:124,102:124:4396:102:3634:-259.226,0,-327.777	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:230:108,122:108:3868:122:4376:-324.702,0,-279.022	0/1:155:80,75:80:2872:75:2688:-195.505,0,-212.057	0/0:74:74,0:74:2622:0:0:0,-22.2762,-236.225	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:27:14,13:14:504:13:468:-34.3318,0,-37.5703	0/0:9:9,0:9:309:0:0:0,-2.70927,-28.1407	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:135:135,0:135:4788:0:0:0,-40.639,-431.073	0/0:139:139,0:139:4976:0:0:0,-41.8432,-447.987	0/1:69:43,26:43:1540:26:932:-63.4278,0,-118.122	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/1:130:59,71:59:2062:71:2548:-190.436,0,-146.714	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/1:143:79,64:79:2836:64:2279:-162.252,0,-212.431	0/1:58:31,27:31:1116:27:972:-70.3382,0,-83.292	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/1:102:49,53:49:1756:53:1900:-140.573,0,-127.619	0/1:69:40,29:40:1402:29:1044:-73.4991,0,-105.702	0/1:140:47,93:47:1680:93:3324:-256.862,0,-109.343	0/0:76:76,0:76:2709:0:0:0,-22.8783,-244.053	0/0:163:163,0:163:5813:0:0:0,-49.0679,-523.284	0/0:128:128,0:128:4539:0:0:0,-38.5318,-408.676	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:127:127,0:127:4526:0:0:0,-38.2308,-407.506	0/1:96:36,60:36:1292:60:2160:-165.739,0,-87.6849	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/1:123:70,53:70:2508:53:1900:-134.251,0,-188.946	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:15:6,9:6:216:9:320:-24.6269,0,-15.2751	0/1:21:10,10:10:356:10:360:-26.3639,0,-26.0012	0/1:73:27,46:27:964:46:1652:-126.864,0,-65.1016	0/0:125:122,2:122:4322:2:72:0,-30.8508,-382.32	0/0:11:11,0:11:380:0:0:0,-3.31133,-34.532	0/1:95:40,55:40:1424:55:1971:-149.067,0,-99.8596	0/0:142:140,2:140:4993:2:72:0,-35.9095,-442.681	0/1:77:46,31:46:1629:31:1116:-77.5724,0,-123.718	0/0:96:96,0:96:3410:0:0:0,-28.8989,-307.113	0/1:124:76,48:76:2697:48:1720:-117.758,0,-205.646	0/1:298:70,228:70:2497:228:8166:-645.242,0,-135.274	0/0:50:50,0:50:1773:0:0:0,-15.0515,-159.851	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.023	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/1:20:10,10:10:345:10:356:-26.3606,0,-25.3602	0/0:66:66,0:66:2345:0:0:0,-19.868,-211.308	0/1:55:26,29:26:932:29:1039:-77.267,0,-67.6422	0/0:125:125,0:125:4438:0:0:0,-37.6287,-399.274	0/0:151:151,0:151:5416:0:0:0,-45.4555,-487.569	0/1:131:61,70:61:2169:70:2508:-186.529,0,-156.04	0/1:92:51,41:51:1816:41:1468:-104.721,0,-136.027	0/1:31:15,16:15:536:16:572:-42.4815,0,-39.2429	0/0:77:77,0:77:2745:0:0:0,-23.1793,-247.291	0/0:106:106,0:106:3773:0:0:0,-31.9092,-339.769	0/0:163:163,0:163:5799:0:0:0,-49.0679,-522.023	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.909	0/0:62:62,0:62:2197:0:0:0,-18.6639,-197.994	0/1:31:16,15:16:572:15:536:-39.2429,0,-42.4815	0/0:137:137,0:137:4878:0:0:0,-41.2411,-439.172	0/1:20:11,9:11:396:9:324:-23.4853,0,-29.9621	0/1:38:16,22:16:564:22:788:-59.8057,0,-39.6512	0/0:61:61,0:61:2173:0:0:0,-18.3628,-195.835	0/0:85:85,0:85:3022:0:0:0,-25.5875,-272.208	0/1:150:68,82:68:2417:82:2932:-218.951,0,-172.63	0/1:65:34,31:34:1212:31:1116:-81.1847,0,-89.8194	0/0:78:78,0:78:2777:0:0:0,-23.4803,-250.17	0/0:73:73,0:73:2601:0:0:0,-21.9752,-234.337
chr04	18308986	.	TC	CC	96236.3	PASS	AB=0.477112;ABP=17.1256;AC=145;AF=0.771277;AN=188;AO=4638;CIGAR=1X1M;DP=6282;DPB=6282;DPRA=0;EPP=10048.3;EPPR=3529.49;GTI=0;LEN=1;MEANALT=1.14894;MQM=53.9219;MQMR=59.9951;NS=94;NUMALT=1;ODDS=3.05043;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=164889;QR=57370;RO=1628;RPL=3;RPP=10048.3;RPPR=3529.49;RPR=4635;RUN=1;SAF=0;SAP=10074.3;SAR=4638;SRF=0;SRP=3538.17;SRR=1628;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:14,9:14:483:9:324:-22.508,0,-36.8727	1/1:65:0,65:0:0:65:2287:-204.865,-19.567,0	1/1:60:0,60:0:0:60:2132:-191.661,-18.0618,0	1/1:119:0,119:0:0:119:4248:-381.872,-35.8226,0	1/1:28:1,27:1:36:27:972:-83.9427,-4.83057,0	1/1:32:0,32:0:0:32:1109:-99.6615,-9.63296,0	0/1:84:48,36:48:1703:36:1277:-89.8353,0,-128.268	1/1:161:0,161:0:0:161:5767:-517.242,-48.4658,0	0/1:64:41,23:41:1440:23:809:-53.6717,0,-110.627	1/1:131:0,130:0:0:130:4615:-414.285,-39.1339,0	1/1:38:0,38:0:0:38:1341:-120.704,-11.4391,0	1/1:59:0,59:0:0:59:2081:-186.672,-17.7608,0	1/1:27:0,27:0:0:27:964:-86.8231,-8.12781,0	1/1:50:0,50:0:0:50:1741:-156.705,-15.0515,0	1/1:32:0,32:0:0:32:1132:-102.015,-9.63296,0	0/1:29:16,13:16:574:13:451:-32.1178,0,-43.2644	1/1:26:0,26:0:0:26:920:-82.9088,-7.82678,0	0/1:34:15,19:15:518:19:672:-50.386,0,-36.7101	0/1:70:30,40:30:1074:40:1432:-107.369,0,-75.9009	0/1:93:46,47:46:1613:47:1680:-123.094,0,-117.46	0/1:117:61,56:61:2161:56:1996:-143.876,0,-159.535	0/1:48:30,18:30:1076:18:644:-43.8253,0,-82.7036	0/1:62:26,36:26:921:36:1292:-97.7417,0,-64.5424	1/1:48:4,41:4:142:41:1464:-118.378,-0.744467,0	1/1:44:0,44:0:0:44:1572:-141.408,-13.2453,0	0/1:341:181,160:181:6402:160:5731:-412.581,0,-473.62	0/1:176:75,100:75:2595:100:3521:-263.165,0,-180.77	1/1:18:0,18:0:0:18:635:-57.2714,-5.41854,0	0/1:107:58,49:58:2038:49:1752:-125.711,0,-151.479	0/1:86:47,39:47:1666:39:1400:-100.065,0,-124.337	1/1:95:0,95:0:0:95:3384:-303.834,-28.5979,0	0/1:11:5,6:5:172:6:216:-16.4511,0,-12.5061	0/1:30:20,10:20:702:10:360:-23.5408,0,-54.472	1/1:9:0,9:0:0:9:305:-27.7158,-2.70927,0	1/1:15:0,15:0:0:15:536:-48.4544,-4.51545,0	1/1:23:0,23:0:0:23:824:-74.3,-6.92369,0	1/1:127:0,127:0:0:127:4488:-403.575,-38.2308,0	1/1:271:0,270:0:0:270:9611:-861.696,-81.2781,0	0/1:44:20,24:20:716:24:856:-63.909,0,-51.5226	0/1:7:4,3:4:144:3:108:-7.82424,0,-11.2064	0/1:44:11,33:11:392:33:1184:-93.2197,0,-22.3749	1/1:35:0,35:0:0:35:1225:-110.132,-10.5361,0	0/1:57:32,24:32:1137:24:860:-60.4935,0,-85.5187	0/1:69:38,31:38:1351:31:1112:-79.4569,0,-101.118	1/1:41:0,41:0:0:41:1436:-129.361,-12.3422,0	0/1:98:55,43:55:1924:43:1531:-108.541,0,-143.931	0/1:78:43,35:43:1538:35:1260:-89.7572,0,-115.233	0/1:105:44,61:44:1519:61:2165:-163.11,0,-105.388	1/1:82:0,81:0:0:81:2900:-260.44,-24.3834,0	1/1:182:0,181:0:0:181:6474:-580.863,-54.4864,0	1/1:22:0,22:0:0:22:777:-70.1133,-6.62266,0	1/1:10:0,10:0:0:10:350:-31.773,-3.0103,0	1/1:65:0,65:0:0:65:2298:-206.487,-19.567,0	0/1:21:13,8:13:453:8:288:-19.9384,0,-34.7791	1/1:24:0,24:0:0:24:864:-77.8751,-7.22472,0	0/1:80:37,43:37:1285:43:1533:-113.327,0,-91.8654	1/1:24:0,24:0:0:24:851:-76.7431,-7.22472,0	0/1:9:8,1:8:286:1:36:-0.887999,0,-23.3762	0/1:20:11,9:11:385:9:316:-22.7511,0,-28.9636	0/1:53:27,26:27:946:26:921:-66.7942,0,-69.4992	1/1:69:0,69:0:0:69:2451:-220.34,-20.7711,0	1/1:8:0,8:0:0:8:288:-26.2485,-2.40824,0	0/1:106:33,72:33:1142:72:2588:-200.781,0,-71.2526	1/1:141:3,138:3:97:138:4944:-435.257,-33.3952,0	0/1:42:33,9:33:1169:9:324:-16.6299,0,-92.8723	1/1:73:0,73:0:0:73:2616:-235.092,-21.9752,0	0/1:141:75,66:75:2618:66:2317:-165.849,0,-193.42	0/1:112:61,51:61:2142:51:1815:-129.708,0,-159.33	1/1:16:0,16:0:0:16:559:-50.5279,-4.81648,0	1/1:30:0,30:0:0:30:1076:-96.907,-9.0309,0	1/1:64:1,63:1:36:63:2246:-198.58,-15.6676,0	0/1:9:4,5:4:142:5:180:-13.8309,0,-10.4199	1/1:83:0,81:0:0:81:2859:-256.064,-24.3834,0	0/1:52:26,26:26:902:26:895:-64.4321,0,-65.8381	1/1:101:0,101:0:0:101:3593:-322.319,-30.404,0	1/1:49:0,49:0:0:49:1760:-158.539,-14.7505,0	0/1:140:73,66:73:2592:66:2356:-168.21,0,-191.337	0/1:135:87,48:87:3068:48:1699:-111.865,0,-235.709	0/1:21:11,10:11:394:10:360:-26.3403,0,-29.4799	1/1:42:1,40:1:36:40:1430:-124.781,-9.10353,0	1/1:68:0,66:0:0:66:2350:-210.591,-19.868,0	1/1:140:0,140:0:0:140:4978:-447.053,-42.1442,0	1/1:61:0,61:0:0:61:2146:-193.166,-18.3628,0	1/1:25:0,25:0:0:25:881:-79.4049,-7.52575,0	0/1:42:21,21:21:735:21:720:-52.4145,0,-53.8273	1/1:88:0,88:0:0:88:3085:-277.491,-26.4906,0	0/1:42:21,21:21:756:21:744:-54.4839,0,-55.724	0/1:59:25,34:25:894:34:1199:-89.9324,0,-63.0196	1/1:33:0,33:0:0:33:1168:-104.913,-9.93399,0	1/1:26:0,26:0:0:26:925:-82.9337,-7.82678,0	0/1:59:30,29:30:1057:29:1028:-74.8005,0,-77.6787	0/1:82:62,20:62:2198:20:716:-39.9535,0,-173.4	1/1:45:0,45:0:0:45:1604:-144.136,-13.5464,0	1/1:55:0,55:0:0:55:1959:-176.367,-16.5567,0
chr04	18308995	.	T	C	125284	PASS	AB=0.488655;ABP=6.40996;AC=145;AF=0.771277;AN=188;AO=4672;CIGAR=1X;DP=6239;DPB=6239;DPRA=0;EPP=18.4058;EPPR=3.41232;GTI=0;LEN=1;MEANALT=1.06383;MQM=53.9069;MQMR=60;NS=94;NUMALT=1;ODDS=4.10989;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=166385;QR=55443;RO=1561;RPL=2427;RPP=18.4058;RPPR=3.41232;RPR=2245;RUN=1;SAF=0;SAP=10148.1;SAR=4672;SRF=0;SRP=3392.68;SRR=1561;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:14,9:14:496:9:324:-22.508,0,-38.0506	1/1:67:0,67:0:0:67:2336:-208.618,-20.169,0	1/1:60:0,60:0:0:60:2148:-193.09,-18.0618,0	1/1:119:0,119:0:0:119:4230:-380.298,-35.8226,0	1/1:28:1,27:1:36:27:953:-82.2353,-4.83057,0	1/1:31:0,31:0:0:31:1112:-99.922,-9.33193,0	0/1:83:48,35:48:1694:35:1256:-88.2506,0,-127.757	1/1:167:0,167:0:0:167:5964:-534.727,-50.272,0	0/1:64:39,25:39:1392:25:892:-61.1133,0,-106.313	1/1:131:0,130:0:0:130:4608:-413.544,-39.1339,0	1/1:34:0,34:0:0:34:1211:-109.033,-10.235,0	1/1:60:0,60:0:0:60:2136:-191.554,-18.0618,0	1/1:28:0,28:0:0:28:1004:-90.4294,-8.42884,0	1/1:51:0,51:0:0:51:1805:-162.435,-15.3525,0	1/1:33:0,33:0:0:33:1180:-106.321,-9.93399,0	0/1:28:15,13:15:536:13:468:-33.9491,0,-40.146	1/1:26:0,26:0:0:26:932:-83.9759,-7.82678,0	0/1:31:12,19:12:428:19:672:-51.2443,0,-29.5269	0/1:70:30,40:30:1061:40:1428:-107.035,0,-74.7273	0/1:94:44,50:44:1572:50:1781:-131.822,0,-113.475	0/1:113:57,54:57:2044:54:1925:-139.263,0,-150.537	0/1:49:29,20:29:1009:20:716:-49.9996,0,-76.3685	0/1:61:24,37:24:864:37:1324:-100.921,0,-59.7197	1/1:46:3,43:3:104:43:1529:-127.453,-4.14457,0	1/1:45:0,45:0:0:45:1593:-143.295,-13.5464,0	0/1:337:177,160:177:6272:160:5699:-411.033,0,-463.128	0/1:168:71,97:71:2529:97:3433:-257.726,0,-177.287	1/1:17:0,17:0:0:17:612:-55.2092,-5.11751,0	0/1:107:56,51:56:1985:51:1813:-131.191,0,-146.712	0/1:82:44,38:44:1561:38:1353:-97.0846,0,-116.095	1/1:94:0,94:0:0:94:3345:-299.619,-28.2968,0	0/1:10:4,6:4:144:6:212:-16.3892,0,-10.3033	0/1:32:19,13:19:657:13:456:-31.2517,0,-49.8175	1/1:9:0,9:0:0:9:324:-29.426,-2.70927,0	1/1:16:0,16:0:0:16:568:-51.2631,-4.81648,0	1/1:23:0,22:0:0:22:792:-71.0667,-6.62266,0	1/1:126:0,126:0:0:126:4459:-401.041,-37.9298,0	1/1:271:0,271:0:0:271:9662:-866.643,-81.5791,0	0/1:44:20,24:20:716:24:860:-64.2648,0,-51.5224	0/1:8:4,4:4:144:4:131:-9.55414,0,-10.9054	0/1:41:10,31:10:356:31:1108:-87.2973,0,-20.039	1/1:35:0,35:0:0:35:1248:-111.695,-10.5361,0	0/1:52:29,23:29:1036:23:824:-58.7264,0,-77.9004	0/1:67:35,32:35:1256:32:1146:-83.0787,0,-93.1763	1/1:41:0,41:0:0:41:1448:-130.437,-12.3422,0	0/1:95:53,42:53:1881:42:1489:-105.665,0,-140.969	0/1:80:43,37:43:1525:37:1313:-93.9159,0,-113.459	0/1:104:43,61:43:1532:61:2188:-165.395,0,-106.866	1/1:81:0,81:0:0:81:2908:-261.187,-24.3834,0	1/1:184:0,184:0:0:184:6553:-587.9,-55.3895,0	1/1:23:0,23:0:0:23:813:-73.3482,-6.92369,0	1/1:8:0,8:0:0:8:284:-25.8595,-2.40824,0	1/1:64:0,64:0:0:64:2292:-205.905,-19.2659,0	0/1:21:13,8:13:464:8:288:-19.937,0,-35.7759	1/1:24:0,24:0:0:24:856:-77.1634,-7.22472,0	0/1:78:34,44:34:1190:44:1580:-118.154,0,-83.9207	1/1:25:0,25:0:0:25:900:-80.9902,-7.52575,0	0/1:9:8,1:8:288:1:36:-0.887999,0,-23.5581	0/1:20:11,9:11:396:9:324:-23.477,0,-29.9621	0/1:52:25,27:25:892:27:964:-70.9716,0,-64.9461	1/1:68:0,68:0:0:68:2444:-219.603,-20.47,0	1/1:7:0,7:0:0:7:252:-23.0124,-2.10721,0	0/1:102:30,72:30:1057:72:2535:-197.424,0,-64.7339	1/1:143:3,140:3:108:140:5000:-439.192,-32.9721,0	0/1:40:32,8:32:1148:8:269:-12.3751,0,-91.5886	1/1:72:0,72:0:0:72:2572:-231.194,-21.6742,0	0/1:139:72,67:72:2523:67:2396:-173.242,0,-185.475	0/1:110:60,50:60:2125:50:1788:-127.874,0,-158.404	1/1:15:0,15:0:0:15:540:-48.8457,-4.51545,0	1/1:31:0,31:0:0:31:1108:-99.7236,-9.33193,0	1/1:66:1,65:1:36:65:2320:-205.223,-16.2697,0	0/1:9:4,5:4:140:5:180:-13.8309,0,-10.2353	1/1:88:0,88:0:0:88:3143:-281.272,-26.4906,0	0/1:52:25,27:25:892:27:925:-67.3148,0,-64.9461	1/1:101:0,101:0:0:101:3599:-322.906,-30.404,0	1/1:50:0,49:0:0:49:1756:-157.82,-14.7505,0	0/1:139:68,71:68:2409:71:2548:-185.634,0,-175.222	0/1:129:81,47:81:2881:47:1692:-112.866,0,-220.635	0/1:21:11,10:11:388:10:360:-26.3403,0,-28.9357	1/1:42:1,41:1:36:41:1468:-128.226,-9.04499,0	1/1:68:0,68:0:0:68:2417:-216.907,-20.47,0	1/1:141:0,141:0:0:141:5033:-452.176,-42.4452,0	1/1:63:0,63:0:0:63:2249:-202.393,-18.9649,0	1/1:25:0,25:0:0:25:900:-81.0682,-7.52575,0	0/1:41:21,20:21:756:20:697:-50.5769,0,-56.025	1/1:92:0,92:0:0:92:3265:-293.571,-27.6948,0	0/1:42:21,21:21:752:21:722:-52.5006,0,-55.363	0/1:57:25,32:25:896:32:1135:-84.8339,0,-63.8016	1/1:35:0,35:0:0:35:1217:-109.28,-10.5361,0	1/1:26:0,26:0:0:26:915:-82.3695,-7.82678,0	0/1:56:30,26:30:1060:26:928:-66.8424,0,-78.8536	0/1:81:61,20:61:2176:20:720:-40.6142,0,-171.723	1/1:42:0,42:0:0:42:1495:-134.632,-12.6433,0	1/1:56:0,56:0:0:56:1989:-179.06,-16.8577,0
chr04	18309022	.	A	G	98643.8	PASS	AB=0.487179;ABP=7.40892;AC=145;AF=0.771277;AN=188;AO=4722;CIGAR=1X;DP=6312;DPB=6312;DPRA=0;EPP=10256.7;EPPR=3451.31;GTI=0;LEN=1;MEANALT=1.02128;MQM=53.8388;MQMR=59.9937;NS=94;NUMALT=1;ODDS=4.55133;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168646;QR=56831;RO=1588;RPL=4722;RPP=10256.7;RPPR=3451.31;RPR=0;RUN=1;SAF=0;SAP=10256.7;SAR=4722;SRF=0;SRP=3451.31;SRR=1588;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:14,10:14:489:10:352:-24.721,0,-37.1142	1/1:65:0,65:0:0:65:2320:-207.092,-19.567,0	1/1:61:0,61:0:0:61:2172:-195.252,-18.3628,0	1/1:121:0,121:0:0:121:4340:-389.888,-36.4246,0	1/1:28:1,27:1:36:27:972:-83.9427,-4.83057,0	1/1:31:0,31:0:0:31:1101:-98.9375,-9.33193,0	0/1:82:48,34:48:1724:34:1212:-84.6046,0,-130.761	1/1:166:0,166:0:0:166:5936:-532.303,-49.971,0	0/1:65:38,27:38:1368:27:968:-67.5919,0,-103.854	1/1:132:0,132:0:0:132:4732:-424.948,-39.736,0	1/1:36:0,36:0:0:36:1288:-115.94,-10.8371,0	1/1:62:0,62:0:0:62:2205:-197.632,-18.6639,0	1/1:29:0,29:0:0:29:1036:-93.2806,-8.72987,0	1/1:52:0,52:0:0:52:1848:-166.302,-15.6536,0	1/1:34:0,34:0:0:34:1224:-110.224,-10.235,0	0/1:29:16,13:16:576:13:460:-32.94,0,-43.4451	1/1:26:0,26:0:0:26:936:-84.3469,-7.82678,0	0/1:33:14,19:14:504:19:672:-50.6422,0,-35.7641	0/1:67:30,37:30:1053:37:1332:-99.3277,0,-74.9096	0/1:98:46,52:46:1648:52:1856:-137.26,0,-119.108	0/1:113:56,57:56:2004:57:2040:-149.028,0,-146.617	0/1:50:30,20:30:1072:20:712:-49.338,0,-81.741	0/1:63:27,36:27:968:36:1288:-97.0809,0,-68.4725	1/1:50:4,46:4:144:46:1652:-134.648,-1.73788,0	1/1:45:0,45:0:0:45:1608:-144.642,-13.5464,0	0/1:334:175,158:175:6276:158:5656:-407.81,0,-464.369	0/1:176:72,104:72:2584:104:3700:-279.184,0,-179.828	1/1:17:0,17:0:0:17:608:-54.8491,-5.11751,0	0/1:104:56,47:56:1996:47:1673:-119.447,0,-148.548	0/1:85:46,39:46:1629:39:1399:-100.301,0,-121.309	1/1:95:0,95:0:0:95:3377:-302.747,-28.5979,0	0/1:11:5,6:5:180:6:216:-16.4511,0,-13.2407	0/1:30:19,11:19:684:11:392:-26.1167,0,-52.8594	1/1:9:0,9:0:0:9:324:-29.426,-2.70927,0	1/1:16:0,16:0:0:16:576:-51.9764,-4.81648,0	1/1:23:0,23:0:0:23:824:-74.3,-6.92369,0	1/1:133:0,133:0:0:133:4725:-424.751,-40.037,0	1/1:270:0,270:0:0:270:9649:-865.233,-81.2781,0	0/1:44:20,24:20:720:24:852:-63.5532,0,-51.8835	0/1:8:4,4:4:144:4:140:-10.3355,0,-10.9054	0/1:44:11,33:11:396:33:1180:-92.8643,0,-22.7374	1/1:35:0,35:0:0:35:1248:-111.695,-10.5361,0	0/1:56:31,25:31:1112:25:892:-62.8575,0,-83.5337	0/1:70:38,32:38:1364:32:1148:-82.336,0,-101.989	1/1:40:0,40:0:0:40:1436:-129.361,-12.0412,0	0/1:99:56,43:56:2012:43:1529:-108.057,0,-151.55	0/1:81:43,38:43:1540:38:1364:-98.1899,0,-114.51	0/1:100:42,58:42:1504:58:2072:-156.207,0,-105.552	1/1:81:0,81:0:0:81:2865:-257.299,-24.3834,0	1/1:186:0,186:0:0:186:6640:-595.795,-55.9916,0	1/1:23:0,23:0:0:23:824:-74.2596,-6.92369,0	1/1:10:0,10:0:0:10:356:-32.2762,-3.0103,0	1/1:63:0,63:0:0:63:2252:-202.368,-18.9649,0	0/1:22:13,9:13:460:9:324:-22.8735,0,-35.1127	1/1:23:0,23:0:0:23:824:-74.2889,-6.92369,0	0/1:81:36,45:36:1292:45:1612:-118.942,0,-92.2003	1/1:24:0,24:0:0:24:864:-77.9422,-7.22472,0	0/1:9:8,1:8:288:1:36:-0.887999,0,-23.5581	0/1:19:11,8:11:396:8:288:-20.5405,0,-30.2632	0/1:54:27,27:27:964:27:960:-69.9706,0,-70.8212	1/1:70:0,70:0:0:70:2512:-225.715,-21.0721,0	1/1:8:0,8:0:0:8:288:-26.2485,-2.40824,0	0/1:104:32,72:32:1152:72:2571:-199.641,0,-72.683	1/1:141:3,138:3:108:138:4905:-430.67,-32.3701,0	0/1:42:33,9:33:1169:9:324:-16.6299,0,-92.872	1/1:74:0,74:0:0:74:2648:-237.97,-22.2762,0	0/1:138:73,65:73:2586:65:2324:-166.985,0,-191.444	0/1:107:58,49:58:2088:49:1760:-126.257,0,-155.98	1/1:16:0,16:0:0:16:568:-51.3487,-4.81648,0	1/1:31:0,31:0:0:31:1112:-100.076,-9.33193,0	1/1:69:1,68:1:36:68:2422:-214.311,-17.1728,0	0/1:8:3,5:3:108:5:180:-14.1319,0,-7.66693	1/1:91:0,91:0:0:91:3252:-290.618,-27.3937,0	0/1:53:25,28:25:888:28:1000:-73.2936,0,-64.2844	1/1:101:0,101:0:0:101:3617:-324.445,-30.404,0	1/1:49:0,49:0:0:49:1760:-158.538,-14.7505,0	0/1:140:69,71:69:2456:71:2548:-185.075,0,-179.143	0/1:135:86,49:86:3084:49:1760:-117.218,0,-237.149	0/1:21:11,10:11:396:10:356:-25.9822,0,-29.6611	1/1:43:1,42:1:36:42:1504:-131.39,-9.34602,0	1/1:68:0,68:0:0:68:2428:-217.919,-20.47,0	1/1:143:0,143:0:0:143:5107:-458.386,-43.0473,0	1/1:64:0,64:0:0:64:2272:-204.482,-19.2659,0	1/1:25:0,25:0:0:25:891:-80.258,-7.52575,0	0/1:39:19,20:19:684:20:716:-52.937,0,-50.1502	1/1:93:0,93:0:0:93:3324:-298.816,-27.9958,0	0/1:43:21,22:21:756:22:780:-57.4134,0,-55.4229	0/1:59:25,34:25:900:34:1220:-91.8026,0,-63.5602	1/1:35:0,35:0:0:35:1251:-112.325,-10.5361,0	1/1:26:0,26:0:0:26:928:-83.0958,-7.82678,0	0/1:58:30,28:30:1076:28:996:-72.2252,0,-79.6931	0/1:83:61,22:61:2181:22:777:-45.13,0,-171.569	1/1:43:0,43:0:0:43:1498:-134.391,-12.9443,0	1/1:55:0,55:0:0:55:1960:-176.504,-16.5567,0
chr04	19369505	.	C	G	43214.3	PASS	AB=0.469977;ABP=46.6908;AC=45;AF=0.239362;AN=188;AO=2628;CIGAR=1X;DP=10991;DPB=10991;DPRA=1.33622;EPP=5709.64;EPPR=18145.7;GTI=2;LEN=1;MEANALT=1.12245;MQM=59.9863;MQMR=59.9864;NS=94;NUMALT=1;ODDS=1.2111;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93714;QR=297341;RO=8355;RPL=2628;RPP=5709.64;RPPR=18145.7;RPR=0;RUN=1;SAF=2628;SAP=5709.64;SAR=0;SRF=8355;SRP=18145.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:101:62,39:62:2211:39:1404:-96.2552,0,-168.85	0/0:75:75,0:75:2700:0:0:0,-22.5772,-243.243	0/0:224:223,0:223:7877:0:0:0,-67.1297,-708.598	0/0:256:256,0:256:9122:0:0:0,-77.0637,-820.954	0/0:134:130,3:130:4590:3:108:0,-30.3216,-403.19	0/0:36:36,0:36:1283:0:0:0,-10.8371,-115.773	0/1:94:45,49:45:1620:49:1756:-130.027,0,-117.793	0/0:257:257,0:257:9102:0:0:0,-77.3647,-819.157	0/1:142:73,69:73:2608:69:2447:-177.739,0,-192.222	0/0:91:91,0:91:3225:0:0:0,-27.3937,-290.47	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.844	0/0:101:101,0:101:3575:0:0:0,-30.404,-321.958	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.78	0/0:51:51,0:51:1803:0:0:0,-15.3525,-162.548	0/1:55:33,22:33:1180:22:792:-55.049,0,-89.9514	0/1:55:27,28:27:968:28:996:-73.3982,0,-70.8807	0/0:40:40,0:40:1419:0:0:0,-12.0412,-128.007	0/1:30:11,19:11:392:19:671:-51.6849,0,-26.5892	0/1:18:7,11:7:252:11:392:-30.2015,0,-17.6104	0/1:299:181,118:181:6475:118:4219:-289.882,0,-492.799	0/1:173:107,66:107:3828:66:2356:-160.221,0,-292.639	0/1:184:63,120:63:2218:120:4263:-328.398,0,-144.434	0/1:209:124,85:124:4385:85:3048:-211.634,0,-331.909	0/1:130:117,13:117:4185:13:468:-3.32575,0,-337.696	0/0:218:218,0:218:7760:0:0:0,-65.6245,-698.432	0/1:273:144,129:144:5155:129:4583:-330.454,0,-381.909	0/1:332:197,135:197:7032:135:4817:-333.743,0,-533	0/0:26:26,0:26:927:0:0:0,-7.82678,-83.7474	0/1:381:203,177:203:7200:177:6339:-455.849,0,-533.305	0/1:149:64,85:64:2272:85:3019:-227.085,0,-159.887	0/0:94:94,0:94:3331:0:0:0,-28.2968,-300.006	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	0/1:38:22,16:22:780:16:576:-40.7358,0,-59.0839	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:30:30,0:30:1059:0:0:0,-9.0309,-95.6204	0/0:187:187,0:187:6615:0:0:0,-56.2926,-595.412	0/0:200:200,0:200:7101:0:0:0,-60.206,-639.15	0/1:49:26,23:26:919:23:811:-58.5595,0,-68.2757	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:175:95,80:95:3398:80:2856:-204.598,0,-253.353	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3611	0/1:191:63,128:63:2241:128:4545:-351.722,0,-144.455	0/1:39:16,23:16:576:23:824:-62.7431,0,-40.4348	0/0:60:60,0:60:2108:0:0:0,-18.0618,-189.987	0/1:173:83,90:83:2969:90:3223:-238.208,0,-215.363	0/1:214:103,111:103:3666:111:3958:-291.991,0,-265.723	0/1:234:137,96:137:4876:96:3419:-237.553,0,-368.62	0/0:92:92,0:92:3304:0:0:0,-27.6948,-297.578	0/0:138:138,0:138:4917:0:0:0,-41.5421,-442.682	0/0:197:197,0:197:7034:0:0:0,-59.3029,-633.123	0/0:16:16,0:16:563:0:0:0,-4.81648,-50.9992	0/0:153:153,0:153:5465:0:0:0,-46.0576,-491.977	0/1:94:41,53:41:1458:53:1900:-142.981,0,-103.218	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:176:109,67:109:3795:67:2364:-160.036,0,-288.768	0/0:79:79,0:79:2824:0:0:0,-23.7814,-254.399	0/1:27:17,10:17:608:10:356:-24.2534,0,-46.7931	0/1:16:12,4:12:414:4:144:-8.49714,0,-32.7725	0/1:94:42,50:42:1480:50:1788:-133.167,0,-105.457	0/0:86:86,0:86:3058:0:0:0,-25.8886,-275.449	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:180:91,89:91:3221:89:3187:-232.868,0,-235.925	0/0:325:324,1:324:11560:1:36:0,-94.2365,-1036.67	0/1:67:42,24:42:1508:24:856:-57.1334,0,-115.787	0/0:135:135,0:135:4806:0:0:0,-40.639,-432.695	0/1:253:144,109:144:5140:109:3886:-273.773,0,-386.58	0/1:203:65,138:65:2280:138:4900:-380.042,0,-144.242	0/0:36:36,0:36:1277:0:0:0,-10.8371,-115.231	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.422	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.428	0/1:15:10,5:10:360:5:180:-12.0366,0,-28.2289	0/0:223:223,0:223:7900:0:0:0,-67.1297,-711.027	0/1:118:76,42:76:2724:42:1507:-100.403,0,-209.882	0/0:183:183,0:183:6528:0:0:0,-55.0885,-587.603	0/0:152:152,0:152:5444:0:0:0,-45.7566,-490.086	0/1:160:81,79:81:2887:79:2809:-204.883,0,-211.902	0/1:135:86,49:86:3046:49:1760:-118.045,0,-233.729	0/1:21:15,6:15:540:6:216:-13.4689,0,-42.6149	0/0:164:164,0:164:5832:0:0:0,-49.3689,-524.992	0/0:127:127,0:127:4532:0:0:0,-38.2308,-408.046	0/0:369:368,1:368:13129:1:32:0,-107.881,-1178.22	0/0:113:113,0:113:4026:0:0:0,-34.0164,-362.529	0/0:53:53,0:53:1892:0:0:0,-15.9546,-170.558	0/1:37:18,19:18:648:19:680:-50.3911,0,-47.5138	0/0:124:124,0:124:4386:0:0:0,-37.3277,-394.915	0/1:24:12,12:12:424:12:423:-31.1803,0,-31.2717	0/1:54:26,28:26:936:28:1000:-74.0598,0,-68.3038	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:55:19,36:19:680:36:1256:-96.7837,0,-44.9725	0/1:95:31,64:31:1093:64:2292:-177.944,0,-70.0798	0/0:107:106,1:106:3767:1:36:0,-28.6119,-335.63	0/0:87:87,0:87:3098:0:0:0,-26.1896,-279.047
chr04	21240985	.	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chr04	24056320	.	C	T	76087.7	PASS	AB=0.580017;ABP=134.369;AC=142;AF=0.755319;AN=188;AO=3620;CIGAR=1X;DP=4616;DPB=4616;DPRA=0;EPP=7846.38;EPPR=2137.65;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9925;MQMR=59.9749;NS=94;NUMALT=1;ODDS=1.14889;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129225;QR=35518;RO=995;RPL=3618;RPP=7846.38;RPPR=2137.65;RPR=2;RUN=1;SAF=0;SAP=7863.74;SAR=3620;SRF=0;SRP=2163.63;SRR=995;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:12:7,5:7:252:5:172:-12.2056,0,-19.4166	1/1:116:1,115:1:36:115:4112:-366.667,-31.3212,0	1/1:52:0,52:0:0:52:1864:-168.039,-15.6536,0	1/1:102:0,102:0:0:102:3640:-327.805,-30.7051,0	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	0/1:66:30,36:30:1050:36:1284:-95.9949,0,-74.9383	0/1:77:46,31:46:1656:31:1112:-77.212,0,-125.831	0/1:43:17,26:17:608:26:932:-71.2546,0,-42.1077	1/1:91:0,91:0:0:91:3260:-293.621,-27.3937,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	1/1:32:0,32:0:0:32:1140:-102.909,-9.63296,0	1/1:31:0,31:0:0:31:1103:-99.5798,-9.33193,0	0/1:28:8,20:8:284:20:716:-56.3389,0,-17.4745	1/1:23:0,23:0:0:23:796:-71.957,-6.92369,0	0/1:22:9,13:9:324:13:468:-35.837,0,-22.8832	0/1:9:3,6:3:108:6:212:-16.7155,0,-7.3659	0/1:54:24,30:24:856:30:1080:-81.2576,0,-61.1055	0/1:80:36,44:36:1287:44:1552:-115.887,0,-92.0504	0/1:37:22,15:22:788:15:536:-37.4367,0,-60.1067	0/1:57:23,34:23:824:34:1193:-90.5145,0,-57.3246	0/1:78:10,68:10:356:68:2440:-196.374,0,-8.90091	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/1:139:60,78:60:2156:78:2800:-210.338,0,-152.405	0/1:62:24,38:24:856:38:1360:-104.037,0,-58.6972	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:74:37,37:37:1324:37:1316:-96.4656,0,-97.1859	0/1:97:33,64:33:1168:64:2273:-175.631,0,-76.2273	1/1:71:0,71:0:0:71:2550:-229.75,-21.3731,0	0/1:13:6,7:6:212:7:248:-18.7508,0,-15.5114	0/1:15:7,8:7:252:8:284:-21.3879,0,-18.5135	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:18:1,17:1:36:17:593:-50.0964,-1.82027,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:67:0,67:0:0:67:2396:-215.897,-20.169,0	1/1:110:0,110:0:0:110:3925:-353.442,-33.1133,0	1/1:32:0,32:0:0:32:1136:-102.549,-9.63296,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:75:31,44:31:1116:44:1568:-118.834,0,-78.1744	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:59:24,35:24:860:35:1218:-92.1585,0,-59.9611	0/1:32:13,19:13:468:19:665:-50.5398,0,-32.8267	1/1:28:0,28:0:0:28:988:-89.2339,-8.42884,0	0/1:52:11,41:11:396:41:1476:-117.483,0,-20.3292	0/1:36:16,20:16:572:20:705:-52.9366,0,-40.9763	0/1:95:28,67:28:1004:67:2396:-187.299,0,-62.078	0/1:90:27,63:27:968:63:2252:-175.851,0,-60.3447	1/1:77:0,77:0:0:77:2760:-248.642,-23.1793,0	1/1:89:0,89:0:0:89:3181:-286.512,-26.7917,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:54:0,54:0:0:54:1928:-173.797,-16.2556,0	0/1:45:24,21:24:855:21:748:-54.0989,0,-63.7238	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:59:32,27:32:1139:27:964:-69.3155,0,-85.0576	0/1:29:17,12:17:599:12:428:-30.1289,0,-45.5082	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:42:29,13:29:1036:13:468:-29.8164,0,-80.9107	0/1:39:19,20:19:676:20:712:-52.6665,0,-49.4278	1/1:49:0,49:0:0:49:1752:-157.964,-14.7505,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:200:93,107:93:3320:107:3840:-285.589,0,-238.813	0/1:91:39,52:39:1396:52:1860:-140.286,0,-98.5454	0/1:47:8,39:8:288:39:1400:-112.151,0,-12.119	1/1:36:0,36:0:0:36:1279:-115.412,-10.8371,0	0/1:91:43,48:43:1539:48:1719:-127.601,0,-111.409	1/1:67:0,67:0:0:67:2396:-215.897,-20.169,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:42:0,42:0:0:42:1512:-136.375,-12.6433,0	1/1:38:0,38:0:0:38:1350:-121.798,-11.4391,0	0/1:20:12,8:12:416:8:288:-20.2468,0,-31.751	1/1:52:0,52:0:0:52:1855:-167.229,-15.6536,0	1/1:69:0,69:0:0:69:2476:-223.093,-20.7711,0	1/1:102:0,102:0:0:102:3640:-327.759,-30.7051,0	1/1:93:0,93:0:0:93:3332:-300.097,-27.9958,0	0/1:35:16,19:16:572:19:676:-50.6319,0,-41.2774	0/1:85:28,57:28:982:57:2007:-155.311,0,-63.1041	0/1:19:9,10:9:320:10:345:-25.6613,0,-23.4228	1/1:61:1,60:1:36:60:2144:-189.629,-14.7646,0	1/1:49:0,49:0:0:49:1756:-158.324,-14.7505,0	1/1:96:0,96:0:0:96:3425:-308.462,-28.8989,0	1/1:43:0,43:0:0:43:1536:-138.533,-12.9443,0	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	0/1:29:11,18:11:392:18:636:-48.8382,0,-26.8902	1/1:44:0,44:0:0:44:1580:-142.492,-13.2453,0	0/1:14:8,6:8:284:6:212:-15.2104,0,-21.6889	0/1:38:8,30:8:280:30:1076:-85.7137,0,-14.1002	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	0/1:27:13,14:13:459:14:504:-37.5703,0,-33.5163	0/1:28:20,8:20:716:8:284:-17.4745,0,-56.3389	1/1:116:0,116:0:0:116:4110:-370.085,-34.9195,0	1/1:38:1,37:1:36:37:1313:-114.871,-7.84087,0
chr04	24891870	.	C	T	24290.2	PASS	AB=0.549588;ABP=57.4963;AC=40;AF=0.212766;AN=188;AO=1414;CIGAR=1X;DP=6413;DPB=6413;DPRA=0.966071;EPP=3064.79;EPPR=10853.9;GTI=2;LEN=1;MEANALT=1;MQM=59.3317;MQMR=59.6126;NS=94;NUMALT=1;ODDS=0.0149833;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=50621;QR=179080;RO=4997;RPL=0;RPP=3073.47;RPPR=10853.9;RPR=1414;RUN=1;SAF=1413;SAP=3064.79;SAR=1;SRF=4997;SRP=10853.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:11,13:11:396:13:468:-35.2349,0,-28.7498	0/0:78:77,1:77:2738:1:36:0,-19.8821,-243.029	0/0:157:157,0:157:5628:0:0:0,-47.2617,-506.602	0/0:107:106,1:106:3804:1:34:0,-28.8113,-339.149	0/0:54:53,1:53:1900:1:36:0,-12.6573,-167.675	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.213	0/1:109:39,70:39:1404:70:2497:-192.155,0,-93.8423	0/1:99:32,67:32:1152:67:2400:-185.916,0,-74.1718	0/0:64:63,1:63:2256:1:36:0,-15.6676,-199.673	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.915	0/1:67:41,26:41:1472:26:932:-64.0161,0,-112.603	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.334	0/0:87:87,0:87:3132:0:0:0,-26.1896,-282.066	0/0:89:89,0:89:3196:0:0:0,-26.7917,-287.835	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.73	0/1:65:32,33:32:1143:33:1180:-86.9378,0,-83.5979	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.028	0/1:99:52,47:52:1851:47:1688:-122.389,0,-137.015	0/1:59:42,17:42:1504:17:612:-37.6445,0,-117.87	0/1:89:40,49:40:1432:49:1752:-130.707,0,-102.386	0/1:96:58,38:58:2088:38:1349:-92.5818,0,-159.272	0/0:40:38,2:38:1360:2:72:0,-5.20448,-115.863	0/1:33:13,20:13:468:20:720:-55.181,0,-32.5247	0/1:41:35,6:35:1252:6:216:-6.41119,0,-100.627	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.516	0/1:135:44,91:44:1576:91:3268:-253.604,0,-101.472	0/1:168:69,99:69:2468:99:3564:-269.352,0,-171.792	0/1:40:14,26:14:504:26:936:-72.5101,0,-33.6476	0/1:116:40,76:40:1440:76:2720:-209.878,0,-94.975	0/1:48:25,23:25:900:23:828:-60.384,0,-66.8716	0/0:67:67,0:67:2389:0:0:0,-20.169,-215.256	0/1:15:12,3:12:432:3:108:-5.55972,0,-34.7057	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.9835	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:276:276,0:276:9870:0:0:0,-83.0843,-888.2	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/0:106:106,0:106:3804:0:0:0,-31.9092,-342.314	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5488	0/1:58:21,37:21:748:37:1332:-102.703,0,-50.1571	0/1:54:28,26:28:1004:26:936:-68.3038,0,-74.4064	0/1:47:23,24:23:820:24:864:-63.9295,0,-59.9723	0/1:87:37,50:37:1323:50:1800:-136.053,0,-93.1767	0/0:98:98,0:98:3520:0:0:0,-29.5009,-316.982	0/1:49:19,30:19:684:30:1080:-82.7275,0,-47.1399	0/0:69:68,0:68:2444:0:0:0,-20.47,-219.845	0/1:84:34,50:34:1220:50:1769:-134.149,0,-84.8179	0/1:92:43,49:43:1540:49:1752:-130.214,0,-111.107	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.581	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.159	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.084	0/1:21:7,14:7:252:14:504:-39.3588,0,-16.7073	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8739	0/1:63:15,48:15:536:48:1724:-136.47,0,-29.548	0/1:38:14,24:14:500:24:845:-64.8862,0,-33.8947	0/1:8:7,1:7:248:1:32:-0.791073,0,-20.255	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:35:9,26:9:324:26:913:-71.9266,0,-18.9698	0/0:121:120,1:120:4296:1:36:0,-32.8264,-383.192	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6957	0/1:55:18,37:18:648:37:1305:-101.148,0,-42.0943	0/1:82:42,40:42:1508:40:1413:-102.745,0,-111.33	0/1:43:19,24:19:663:24:860:-64.7775,0,-47.0492	0/0:31:30,1:30:1076:1:36:0,-5.73365,-93.5499	0/0:81:81,0:81:2912:0:0:0,-24.3834,-262.312	0/0:53:51,2:51:1836:2:72:0,-9.11787,-158.682	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.813	0/0:60:60,0:60:2144:0:0:0,-18.0618,-193.228	0/0:85:85,0:85:3048:0:0:0,-25.5875,-274.544	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.916	0/0:49:49,0:49:1752:0:0:0,-14.7505,-157.964	0/0:75:75,0:75:2676:0:0:0,-22.5772,-240.962	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.022	0/1:50:19,31:19:684:31:1108:-84.7892,0,-46.813	0/0:68:68,0:68:2413:0:0:0,-20.47,-217.388	0/1:10:9,1:9:324:1:32:-0.189013,0,-26.3036	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.322	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.185	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.968	0/0:112:111,1:111:3984:1:36:0,-30.1171,-355.138	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.958	0/1:129:66,63:66:2363:63:2264:-165.146,0,-174.059	0/0:145:144,1:144:5154:1:36:0,-40.0511,-460.369	0/1:41:17,24:17:608:24:864:-65.7322,0,-42.7016	0/0:115:115,0:115:4120:0:0:0,-34.6184,-370.87	0/0:90:90,0:90:3236:0:0:0,-27.0927,-291.431	0/0:73:73,0:73:2620:0:0:0,-21.9752,-235.981	0/1:106:66,40:66:2363:40:1440:-97.7382,0,-180.986	0/1:76:22,54:22:783:54:1936:-151.624,0,-47.9123	0/0:28:28,0:28:989:0:0:0,-8.42884,-89.322	0/0:227:226,0:226:8094:0:0:0,-68.0328,-728.088
chr04	24891871	.	G	A	107860	PASS	AB=0.446693;ABP=66.4443;AC=148;AF=0.787234;AN=188;AO=5010;CIGAR=1X;DP=6444;DPB=6444;DPRA=0;EPP=10882.1;EPPR=3108.22;GTI=2;LEN=1;MEANALT=1;MQM=59.6088;MQMR=59.3668;NS=94;NUMALT=1;ODDS=0.160816;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=179572;QR=51263;RO=1434;RPL=0;RPP=10882.1;RPPR=3116.9;RPR=5010;RUN=1;SAF=5010;SAP=10882.1;SAR=0;SRF=1433;SRP=3108.22;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:13,11:13:468:11:396:-28.7498,0,-35.2349	1/1:79:1,78:1:36:78:2808:-249.328,-20.1831,0	1/1:159:0,159:0:0:159:5700:-512.889,-47.8638,0	1/1:108:0,108:0:0:108:3878:-349.202,-32.5112,0	1/1:54:1,53:1:36:53:1904:-168.035,-12.6573,0	1/1:36:0,36:0:0:36:1273:-114.855,-10.8371,0	0/1:113:74,39:74:2660:39:1404:-92.6382,0,-205.601	0/1:101:69,32:69:2434:32:1148:-73.2176,0,-187.882	1/1:65:1,64:1:36:64:2292:-202.913,-15.9687,0	1/1:52:0,52:0:0:52:1868:-168.392,-15.6536,0	0/1:67:26,41:26:919:41:1472:-112.603,0,-62.8434	1/1:73:0,73:0:0:73:2624:-236.334,-21.9752,0	1/1:85:0,85:0:0:85:3060:-275.59,-25.5876,0	1/1:90:0,90:0:0:90:3227:-290.628,-27.0927,0	1/1:79:0,79:0:0:79:2832:-255.089,-23.7814,0	0/1:66:34,32:34:1216:32:1144:-83.3877,0,-89.8704	1/1:108:0,108:0:0:108:3872:-348.329,-32.5112,0	0/1:98:46,52:46:1656:52:1868:-138.821,0,-119.811	0/1:62:20,42:20:716:42:1512:-117.682,0,-46.0957	0/1:90:49,41:49:1756:41:1476:-106.043,0,-130.985	0/1:98:39,59:39:1400:59:2109:-160.558,0,-96.5625	1/1:40:2,38:2:72:38:1364:-116.223,-5.20448,0	0/1:34:21,13:21:752:13:468:-32.2237,0,-57.7565	0/1:41:5,36:5:180:36:1292:-104.209,0,-4.20983	1/1:42:0,42:0:0:42:1500:-135.126,-12.6433,0	0/1:135:91,44:91:3230:44:1584:-102.165,0,-250.196	0/1:169:101,68:101:3609:68:2444:-169.331,0,-273.424	0/1:42:28,14:28:1008:14:504:-33.0456,0,-78.3849	0/1:114:77,37:77:2745:37:1313:-84.1499,0,-212.74	0/1:48:23,25:23:828:25:896:-66.5109,0,-60.384	1/1:66:0,66:0:0:66:2360:-212.651,-19.868,0	0/1:15:3,12:3:108:12:432:-34.7057,0,-5.55972	0/1:11:4,7:4:144:7:248:-19.3529,0,-10.0023	1/1:16:0,16:0:0:16:561:-50.8171,-4.81648,0	1/1:7:0,7:0:0:7:252:-22.9835,-2.10721,0	1/1:18:0,18:0:0:18:633:-57.2951,-5.41854,0	1/1:272:0,272:0:0:272:9748:-877.222,-81.8802,0	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	1/1:107:0,107:0:0:107:3852:-346.63,-32.2102,0	0/1:9:1,8:1:36:8:288:-23.5488,0,-0.889005	0/1:58:37,21:37:1328:21:740:-49.452,0,-102.343	0/1:54:26,28:26:932:28:1004:-74.4064,0,-67.9432	0/1:46:23,23:23:824:23:820:-60.2733,0,-60.6313	0/1:86:50,36:50:1800:36:1288:-90.328,0,-136.354	1/1:102:0,102:0:0:102:3668:-330.295,-30.7051,0	0/1:50:31,19:31:1108:19:680:-46.4777,0,-84.9443	1/1:69:0,69:0:0:69:2469:-222.35,-20.7711,0	0/1:83:50,33:50:1781:33:1184:-81.8796,0,-135.522	0/1:94:51,43:51:1832:43:1544:-110.867,0,-136.809	1/1:36:0,36:0:0:36:1296:-116.942,-10.8371,0	1/1:52:0,52:0:0:52:1857:-167.406,-15.6536,0	1/1:17:0,17:0:0:17:608:-55.0497,-5.11751,0	1/1:77:0,77:0:0:77:2760:-248.595,-23.1793,0	0/1:22:15,7:15:540:7:252:-16.4063,0,-42.2962	1/1:19:0,19:0:0:19:684:-61.8739,-5.71957,0	0/1:64:48,16:48:1728:16:568:-32.1241,0,-136.529	0/1:39:25,14:25:881:14:504:-33.9556,0,-67.824	0/1:8:1,7:1:36:7:252:-20.6198,0,-1.19003	1/1:13:1,12:1:36:12:432:-35.6229,-0.315115,0	0/1:36:27,9:27:964:9:324:-18.6688,0,-76.2141	1/1:122:1,121:1:36:121:4327:-385.976,-33.1274,0	1/1:14:0,14:0:0:14:504:-45.6957,-4.21442,0	0/1:56:38,18:38:1368:18:648:-41.7933,0,-106.518	0/1:80:38,42:38:1345:42:1508:-111.932,0,-97.2383	0/1:44:25,19:25:881:19:684:-48.645,0,-66.3605	1/1:31:1,30:1:36:30:1080:-93.9103,-5.73366,0	1/1:83:0,83:0:0:83:2965:-266.95,-24.9855,0	1/1:53:2,51:2:72:51:1836:-158.682,-9.11787,0	1/1:37:0,37:0:0:37:1332:-120.173,-11.1381,0	1/1:61:0,61:0:0:61:2192:-197.545,-18.3628,0	1/1:87:0,87:0:0:87:3112:-280.301,-26.1896,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:57:0,57:0:0:57:2033:-183.164,-17.1587,0	1/1:49:0,49:0:0:49:1745:-157.332,-14.7505,0	1/1:75:0,75:0:0:75:2694:-242.478,-22.5773,0	1/1:87:0,87:0:0:87:3120:-281.022,-26.1896,0	0/1:51:31,20:31:1112:20:720:-49.7504,0,-84.9516	1/1:66:0,66:0:0:66:2372:-213.696,-19.868,0	0/1:10:1,9:1:36:9:320:-26.0441,0,-0.587975	1/1:71:0,71:0:0:71:2531:-228.031,-21.3731,0	1/1:70:0,70:0:0:70:2505:-225.554,-21.0721,0	1/1:67:0,67:0:0:67:2412:-217.327,-20.169,0	1/1:112:0,112:0:0:112:4013:-361.346,-33.7154,0	1/1:67:0,67:0:0:67:2408:-216.962,-20.169,0	0/1:130:64,66:64:2300:66:2368:-174.169,0,-168.08	1/1:146:1,145:1:36:145:5200:-464.508,-40.3521,0	0/1:40:23,17:23:824:17:612:-43.364,0,-62.4339	1/1:113:0,113:0:0:113:4047:-364.368,-34.0164,0	1/1:90:0,90:0:0:90:3221:-290.08,-27.0927,0	1/1:74:0,74:0:0:74:2645:-238.156,-22.2762,0	0/1:106:40,66:40:1425:66:2360:-180.717,0,-96.3962	0/1:76:54,22:54:1921:22:780:-47.6424,0,-150.273	1/1:28:0,28:0:0:28:993:-89.6825,-8.42884,0	1/1:228:1,227:1:36:227:8133:-728.356,-65.0366,0
chr04	25499081	.	C	T	75675.3	PASS	AB=0.663467;ABP=1260.29;AC=40;AF=0.212766;AN=188;AO=3614;CIGAR=1X;DP=10892;DPB=10892;DPRA=1.65835;EPP=7850.71;EPPR=15802.6;GTI=8;LEN=1;MEANALT=1.01852;MQM=36.1644;MQMR=42.7262;NS=94;NUMALT=1;ODDS=1.18242;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=128603;QR=258335;RO=7276;RPL=1807;RPP=3.0103;RPPR=15776.6;RPR=1807;RUN=1;SAF=1807;SAP=3.0103;SAR=1807;SRF=3;SRP=15776.6;SRR=7273;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:111:45,66:45:1604:66:2351:-156.469,0,-104.668	0/0:130:127,3:127:4528:3:108:0,-30.4668,-382.305	0/0:345:345,0:345:12248:0:0:0,-103.855,-1059.33	0/0:163:162,1:162:5776:1:32:0,-45.9317,-511.76	0/0:99:96,3:96:3423:3:108:0,-20.876,-286.198	0/0:65:65,0:65:2323:0:0:0,-19.5669,-202.469	0/1:131:29,102:29:1027:102:3607:-254.424,0,-52.4725	0/1:269:115,154:115:4100:154:5488:-365.824,0,-274.848	0/0:99:96,3:96:3362:3:108:0,-20.0355,-280.808	0/0:79:79,0:79:2818:0:0:0,-23.7814,-251.829	0/1:71:21,50:21:729:50:1771:-125.593,0,-43.0017	0/0:69:69,0:69:2451:0:0:0,-20.7711,-212.115	0/0:63:63,0:63:2252:0:0:0,-18.9649,-193.257	0/0:52:52,0:52:1820:0:0:0,-15.6536,-157.103	0/0:58:58,0:58:2045:0:0:0,-17.4597,-182.695	0/1:95:33,62:33:1153:62:2207:-148.014,0,-71.258	0/0:69:69,0:69:2459:0:0:0,-20.7711,-210.202	0/1:88:30,58:30:1048:58:2071:-139.842,0,-63.8366	0/1:60:19,41:19:665:41:1460:-101.433,0,-39.202	0/1:322:107,215:107:3779:215:7647:-533.473,0,-239.726	0/1:229:70,159:70:2497:159:5652:-395.007,0,-147.174	0/0:75:74,1:74:2656:1:36:0,-19.2311,-222.607	0/1:61:24,37:24:843:37:1328:-88.0632,0,-56.8044	0/1:215:77,138:77:2738:138:4910:-332.808,0,-172.034	0/0:149:148,1:148:5252:1:36:0,-41.8727,-447.559	0/1:278:78,200:78:2792:200:7172:-525.026,0,-155.458	0/1:558:206,352:206:7367:352:12576:-866.135,0,-459.71	0/1:61:15,46:15:536:46:1631:-111.703,0,-27.8041	0/0:366:365,1:365:13038:1:36:0,-106.878,-1110.05	0/1:139:44,95:44:1549:95:3355:-226.578,0,-92.1382	0/1:134:43,91:43:1523:91:3219:-224.084,0,-95.3006	0/1:13:6,7:6:199:7:252:-17.8536,0,-13.2439	0/1:14:3,11:3:108:11:384:-25.9778,0,-5.48261	0/0:5:5,0:5:176:0:0:0,-1.50515,-15.7056	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.2764	0/0:13:13,0:13:468:0:0:0,-3.91339,-41.0722	0/0:164:164,0:164:5853:0:0:0,-49.3689,-497.04	0/0:119:118,0:118:4186:0:0:0,-35.5215,-356.502	0/0:82:82,0:82:2924:0:0:0,-24.6845,-251.604	0/1:4:2,2:2:72:2:72:-5.38431,0,-4.90936	0/1:201:61,140:61:2184:140:4969:-340.097,0,-127.541	0/1:66:17,49:17:599:49:1710:-116.316,0,-32.4606	0/1:240:80,160:80:2837:160:5679:-390.29,0,-172.484	0/1:84:18,66:18:640:66:2342:-165.434,0,-32.2115	0/0:48:48,0:48:1706:0:0:0,-14.4494,-152.278	0/0:98:98,0:98:3497:0:0:0,-29.5009,-298.953	0/0:171:171,0:171:6064:0:0:0,-51.4761,-523.838	0/1:228:74,154:74:2647:154:5478:-381.236,0,-168.656	0/1:143:44,99:44:1572:99:3520:-247.666,0,-97.2997	0/0:116:116,0:116:4110:0:0:0,-34.9195,-367.668	0/0:190:190,0:190:6761:0:0:0,-57.1957,-576.905	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.2573	0/0:167:167,0:167:5901:0:0:0,-50.272,-511.05	0/1:47:11,36:11:392:36:1279:-92.0413,0,-19.8125	0/0:13:13,0:13:464:0:0:0,-3.91339,-40.172	0/1:212:81,131:81:2869:131:4641:-311.262,0,-182.83	0/1:85:31,54:31:1112:54:1936:-137.002,0,-73.6847	0/1:7:4,3:4:144:3:108:-7.65535,0,-10.5601	0/1:15:3,12:3:108:12:409:-29.8995,0,-5.07063	0/1:110:34,76:34:1207:76:2711:-180.131,0,-71.1006	0/0:80:79,1:79:2762:1:36:0,-20.6279,-244.076	0/0:8:8,0:8:279:0:0:0,-2.40824,-24.8407	0/1:191:68,123:68:2432:123:4390:-312.066,0,-149.598	0/1:260:107,153:107:3806:153:5458:-372.395,0,-262.029	0/1:130:67,62:67:2379:62:2224:-138.593,0,-164.965	0/0:96:96,0:96:3386:0:0:0,-28.8989,-302.59	0/0:121:120,1:120:4236:1:36:0,-33.237,-375.894	0/0:93:93,0:93:3303:0:0:0,-27.9958,-295.06	0/0:19:19,0:19:684:0:0:0,-5.71957,-59.441	0/0:89:89,0:89:3141:0:0:0,-26.7917,-272.727	0/0:61:61,0:61:2144:0:0:0,-18.3628,-184.329	0/1:32:5,27:5:165:27:959:-68.7188,0,-5.48072	0/0:93:93,0:93:3307:0:0:0,-27.9958,-287.572	0/0:90:90,0:90:3207:0:0:0,-27.0927,-278.341	0/0:148:148,0:148:5252:0:0:0,-44.5524,-450.907	0/0:170:170,0:170:6061:0:0:0,-51.1751,-540.911	0/1:173:57,116:57:2020:116:4134:-276.313,0,-123.163	0/0:149:148,1:148:5248:1:36:0,-41.9507,-454.142	0/1:17:4,13:4:140:13:456:-32.8214,0,-7.45381	0/0:164:163,1:163:5814:1:36:0,-46.3144,-498.086	0/0:163:162,1:162:5720:1:36:0,-45.4722,-488.546	0/0:240:239,1:239:8515:1:36:0,-69.0596,-756.684	0/0:86:86,0:86:3021:0:0:0,-25.8886,-269.535	0/0:72:72,0:72:2547:0:0:0,-21.6742,-226.224	0/1:104:40,64:40:1423:64:2279:-157.296,0,-95.6417	0/0:114:113,1:113:3962:1:36:0,-30.8629,-350.367	0/0:33:33,0:33:1166:0:0:0,-9.93399,-100.821	0/0:54:54,0:54:1891:0:0:0,-16.2556,-165.444	0/0:58:58,0:58:2039:0:0:0,-17.4597,-176.971	0/0:29:29,0:29:1036:0:0:0,-8.72987,-87.7909	0/1:103:21,82:21:752:82:2907:-195.974,0,-32.6365	0/1:116:28,88:28:991:88:3145:-224.323,0,-53.7697	0/0:52:52,0:52:1855:0:0:0,-15.6536,-165.449	0/0:115:115,0:115:4054:0:0:0,-34.6184,-361.632
chr04	25499082	.	C	G	139840	PASS	AB=0.337229;ABP=1243.63;AC=148;AF=0.787234;AN=188;AO=7245;CIGAR=1X;DP=10845;DPB=10845;DPRA=0;EPP=15735.3;EPPR=7807.28;GTI=8;LEN=1;MEANALT=1.06383;MQM=42.742;MQMR=36.1917;NS=94;NUMALT=1;ODDS=0.939883;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=256780;QR=127799;RO=3594;RPL=1;RPP=15726.6;RPPR=3.0103;RPR=7244;RUN=1;SAF=1;SAP=15726.6;SAR=7244;SRF=1797;SRP=3.0103;SRR=1797;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:109:65,44:65:2324:44:1553:-101.325,0,-154.854	1/1:130:3,127:3:108:127:4531:-382.648,-30.4668,0	1/1:340:0,340:0:0:340:12072:-1044.24,-102.35,0	1/1:165:1,164:1:36:164:5841:-517.636,-46.2155,0	1/1:98:3,95:3:108:95:3371:-281.715,-20.5749,0	1/1:65:0,65:0:0:65:2324:-202.029,-19.567,0	0/1:131:102,29:102:3570:29:1021:-51.9995,0,-252.577	0/1:267:149,118:149:5316:118:4193:-283.342,0,-353.02	1/1:99:4,95:4:144:95:3349:-276.536,-16.8084,0	1/1:79:0,79:0:0:79:2801:-250.234,-23.7814,0	0/1:68:49,19:49:1744:19:663:-38.6796,0,-123.975	1/1:70:0,70:0:0:70:2481:-214.629,-21.0721,0	1/1:65:0,64:0:0:64:2263:-195.573,-19.2659,0	1/1:53:0,53:0:0:53:1858:-160.611,-15.9546,0	1/1:58:0,58:0:0:58:2060:-183.797,-17.4597,0	0/1:92:61,31:61:2164:31:1116:-68.4059,0,-145.874	1/1:67:0,67:0:0:67:2392:-204.792,-20.169,0	0/1:89:60,29:60:2156:29:1036:-62.3615,0,-145.459	0/1:60:41,19:41:1468:19:667:-39.433,0,-102.229	0/1:321:213,108:213:7583:108:3811:-242.982,0,-528.999	0/1:226:156,70:156:5547:70:2504:-148.519,0,-386.197	1/1:74:2,72:2:72:72:2579:-212.728,-15.6876,0	0/1:61:37,24:37:1328:24:830:-55.8668,0,-88.2165	0/1:214:136,78:136:4815:78:2756:-174.82,0,-326.864	1/1:145:1,144:1:36:144:5041:-430.641,-40.6686,0	0/1:277:199,78:199:7082:78:2783:-155.082,0,-518.578	0/1:555:348,206:348:12365:206:7287:-455.931,0,-853.425	0/1:61:47,14:47:1661:14:504:-24.8576,0,-114.635	1/1:366:1,365:1:36:365:12994:-1107.42,-106.878,0	0/1:139:93,46:93:3332:46:1616:-98.2819,0,-223.569	0/1:134:92,42:92:3259:42:1485:-91.7391,0,-226.74	0/1:13:7,6:7:252:6:207:-13.2099,0,-17.8536	0/1:14:11,3:11:396:3:108:-5.48261,0,-26.1782	1/1:5:0,5:0:0:5:180:-16.0112,-1.50515,0	1/1:6:0,6:0:0:6:216:-19.1438,-1.80618,0	1/1:13:0,13:0:0:13:464:-40.7707,-3.91339,0	1/1:165:0,165:0:0:165:5879:-500.462,-49.67,0	1/1:119:0,119:0:0:119:4233:-361.335,-35.8226,0	1/1:82:0,82:0:0:82:2892:-248.984,-24.6845,0	0/1:4:2,2:2:72:2:72:-4.90936,0,-5.38431	0/1:201:141,60:141:5023:60:2103:-120.946,0,-343.008	0/1:67:50,17:50:1747:17:604:-32.4237,0,-119.887	0/1:244:162,82:162:5767:82:2880:-175.202,0,-396.86	0/1:85:67,18:67:2374:18:648:-32.4686,0,-167.818	1/1:49:0,49:0:0:49:1734:-154.245,-14.7505,0	1/1:97:0,97:0:0:97:3443:-294.777,-29.1999,0	1/1:171:0,170:0:0:170:5989:-517.644,-51.1751,0	0/1:227:153,74:153:5424:74:2626:-167.088,0,-377.762	0/1:139:96,43:96:3429:43:1536:-95.4644,0,-240.663	1/1:116:0,116:0:0:116:4121:-368.734,-34.9195,0	1/1:191:0,191:0:0:191:6779:-577.945,-57.4967,0	1/1:4:0,4:0:0:4:126:-11.6196,-1.20412,0	1/1:166:0,166:0:0:166:5887:-509.935,-49.971,0	0/1:47:36,11:36:1280:11:396:-20.0876,0,-92.187	1/1:12:0,12:0:0:12:428:-37.0387,-3.61236,0	0/1:208:129,79:129:4574:79:2780:-176.08,0,-306.591	0/1:88:57,31:57:2020:31:1108:-72.5806,0,-143.342	0/1:6:3,3:3:108:3:104:-7.49751,0,-7.95638	0/1:14:11,3:11:392:3:108:-5.37166,0,-28.5733	0/1:110:76,34:76:2689:34:1200:-70.4476,0,-178.732	1/1:76:1,75:1:36:75:2641:-233.194,-19.4238,0	1/1:8:0,8:0:0:8:284:-25.056,-2.40824,0	0/1:185:118,67:118:4202:67:2374:-146.903,0,-298.536	0/1:262:155,107:155:5538:107:3777:-258.771,0,-376.577	0/1:130:62,68:62:2224:68:2419:-168.689,0,-138.763	1/1:96:0,96:0:0:96:3380:-302.189,-28.8989,0	1/1:120:1,119:1:36:119:4208:-373.451,-32.936,0	1/1:94:0,94:0:0:94:3304:-295.037,-28.2968,0	1/1:18:0,18:0:0:18:640:-55.7316,-5.41854,0	1/1:89:0,89:0:0:89:3121:-271.242,-26.7917,0	1/1:60:0,60:0:0:60:2116:-181.565,-18.0618,0	0/1:32:27,5:27:947:5:171:-5.9405,0,-68.0697	1/1:94:0,94:0:0:94:3337:-289.974,-28.2968,0	1/1:91:0,90:0:0:90:3212:-278.572,-27.0927,0	1/1:147:0,147:0:0:147:5175:-444.089,-44.2514,0	1/1:174:0,174:0:0:174:6190:-552.54,-52.3792,0	0/1:175:117,58:117:4165:58:2058:-126.293,0,-278.968	1/1:147:1,145:1:36:145:5159:-446.101,-41.3668,0	0/1:17:13,4:13:468:4:144:-7.76106,0,-33.3318	1/1:164:1,163:1:36:163:5793:-496.041,-46.3144,0	1/1:163:1,162:1:36:162:5783:-493.804,-45.4722,0	1/1:239:1,238:1:36:238:8507:-755.878,-68.7585,0	1/1:85:0,85:0:0:85:2997:-267.331,-25.5876,0	1/1:71:0,71:0:0:71:2515:-223.355,-21.3731,0	0/1:102:64,38:64:2288:38:1347:-89.6421,0,-158.12	1/1:112:1,111:1:36:111:3850:-340.666,-30.2609,0	1/1:33:0,32:0:0:32:1140:-97.8456,-9.63296,0	1/1:53:0,53:0:0:53:1889:-164.982,-15.9546,0	1/1:58:0,58:0:0:58:2032:-176.352,-17.4597,0	1/1:29:0,29:0:0:29:1032:-87.473,-8.72987,0	0/1:104:82,22:82:2886:22:774:-34.3297,0,-194.7	0/1:113:85,28:85:3028:28:993:-54.9751,0,-216.61	1/1:51:0,51:0:0:51:1819:-162.42,-15.3525,0	1/1:112:0,112:0:0:112:3966:-353.697,-33.7154,0
chr04	25578561	.	G	A	25129.6	PASS	AB=0.495062;ABP=3.69659;AC=40;AF=0.212766;AN=188;AO=1609;CIGAR=1X;DP=7696;DPB=7696;DPRA=1.05381;EPP=3496.91;EPPR=13207.7;GTI=1;LEN=1;MEANALT=1.02222;MQM=42.954;MQMR=54.42;NS=94;NUMALT=1;ODDS=1.92684;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57122;QR=215039;RO=6085;RPL=0;RPP=3496.91;RPPR=13199.1;RPR=1609;RUN=1;SAF=0;SAP=3496.91;SAR=1609;SRF=3;SRP=13190.4;SRR=6082;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:26:14,12:14:500:12:409:-28.2097,0,-37.2165	0/0:167:167,0:167:5978:0:0:0,-50.272,-536.527	0/0:115:115,0:115:4099:0:0:0,-34.6184,-366.782	0/0:139:139,0:139:4884:0:0:0,-41.8432,-439.458	0/1:48:42,6:42:1499:6:216:-4.91611,0,-120.312	0/0:32:32,0:32:1121:0:0:0,-9.63296,-100.83	0/1:75:36,39:36:1277:39:1384:-100.626,0,-92.5964	0/1:170:84,86:84:2950:86:3029:-211.426,0,-213.482	0/0:55:55,0:55:1950:0:0:0,-16.5566,-174.787	0/0:97:97,0:97:3449:0:0:0,-29.1999,-310.406	0/1:131:59,72:59:2096:72:2551:-185.976,0,-149.34	0/0:62:62,0:62:2191:0:0:0,-18.6639,-196.98	0/0:66:66,0:66:2322:0:0:0,-19.868,-207.75	0/0:135:135,0:135:4792:0:0:0,-40.639,-430.586	0/0:58:58,0:58:2060:0:0:0,-17.4597,-185.491	0/1:68:34,34:34:1171:34:1205:-84.843,0,-84.9971	0/0:125:125,0:125:4430:0:0:0,-37.6287,-397.344	0/1:90:51,39:51:1817:39:1388:-92.7491,0,-136.278	0/1:46:24,22:24:860:22:788:-55.0551,0,-63.5331	0/1:182:94,88:94:3336:88:3112:-218.395,0,-245.402	0/1:126:75,51:75:2629:51:1808:-120.799,0,-198.613	0/0:45:45,0:45:1584:0:0:0,-13.5463,-142.801	0/1:27:8,19:8:273:19:653:-49.7181,0,-16.7614	0/1:63:25,38:25:896:38:1360:-99.1775,0,-61.8646	0/0:33:33,0:33:1172:0:0:0,-9.93399,-105.646	0/1:195:97,98:97:3436:98:3452:-246.18,0,-250.606	0/1:153:71,81:71:2513:81:2874:-202.895,0,-179.608	0/1:23:10,13:10:352:13:468:-34.6492,0,-24.9213	0/0:178:178,0:178:6332:0:0:0,-53.5833,-569.606	0/1:119:61,58:61:2153:58:2054:-144.852,0,-157.86	0/0:51:51,0:51:1820:0:0:0,-15.3525,-162.541	0/1:9:2,7:2:72:7:243:-19.0279,0,-4.11776	0/1:16:4,12:4:144:12:428:-32.9911,0,-8.47826	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.4477	0/0:8:8,0:8:280:0:0:0,-2.40824,-25.4809	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.9711	0/0:135:135,0:135:4770:0:0:0,-40.639,-428.878	0/0:84:83,1:83:2929:1:36:0,-21.7655,-259.906	0/0:107:107,0:107:3771:0:0:0,-32.2102,-338.242	0/1:5:3,2:3:108:2:72:-5.18477,0,-8.55573	0/1:138:57,81:57:2018:81:2879:-210.835,0,-140.1	0/1:33:21,12:21:736:12:432:-28.3565,0,-56.3191	0/1:93:45,48:45:1595:48:1720:-123.267,0,-115.525	0/1:68:36,32:36:1280:32:1152:-81.4823,0,-94.8431	0/0:54:54,0:54:1911:0:0:0,-16.2556,-172.104	0/0:40:40,0:40:1428:0:0:0,-12.0412,-127.622	0/0:133:133,0:133:4738:0:0:0,-40.037,-424.083	0/1:111:55,56:55:1972:56:1995:-142.402,0,-143.923	0/1:65:29,36:29:1018:36:1270:-93.2954,0,-72.3154	0/0:164:164,0:164:5760:0:0:0,-49.3689,-517.695	0/0:102:102,0:102:3584:0:0:0,-30.7051,-322.622	0/0:13:13,0:13:460:0:0:0,-3.91339,-41.6009	0/0:129:128,1:128:4508:1:36:0,-35.3522,-401.152	0/1:35:18,17:18:644:17:595:-42.8981,0,-47.7475	0/0:21:21,0:21:729:0:0:0,-6.32163,-65.7724	0/1:129:61,68:61:2163:68:2402:-172.137,0,-155.663	0/1:13:9,4:9:316:4:144:-9.21612,0,-24.841	0/1:11:9,2:9:311:2:72:-3.46561,0,-25.0093	0/1:27:12,15:12:424:15:531:-39.1266,0,-29.8426	0/1:90:48,42:48:1716:42:1504:-105.036,0,-127.262	0/0:110:110,0:110:3892:0:0:0,-33.1133,-350.145	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7134	0/1:108:56,52:56:1976:52:1860:-131.382,0,-145.523	0/1:183:95,88:95:3378:88:3127:-218.809,0,-248.912	0/1:56:34,22:34:1173:22:788:-52.7529,0,-88.7265	0/0:54:54,0:54:1924:0:0:0,-16.2556,-173.254	0/0:108:108,0:108:3819:0:0:0,-32.5112,-343.127	0/0:77:76,1:76:2698:1:36:0,-19.6308,-239.189	0/0:61:61,0:61:2154:0:0:0,-18.3628,-193.658	0/0:63:63,0:63:2198:0:0:0,-18.9649,-197.427	0/0:119:119,0:119:4171:0:0:0,-35.8226,-375.272	0/1:31:13,18:13:464:18:648:-48.484,0,-32.7027	0/0:65:65,0:65:2292:0:0:0,-19.5669,-206.001	0/0:52:52,0:52:1839:0:0:0,-15.6536,-164.683	0/0:50:50,0:50:1755:0:0:0,-15.0515,-157.583	0/0:96:96,0:96:3433:0:0:0,-28.8989,-308.091	0/1:189:90,99:90:3147:99:3543:-246.609,0,-225.022	0/0:139:138,1:138:4854:1:36:0,-38.3625,-431.384	0/1:10:7,3:7:252:3:108:-6.73565,0,-19.8615	0/0:143:143,0:143:5036:0:0:0,-43.0473,-451.634	0/0:137:137,0:137:4858:0:0:0,-41.2411,-435.494	0/0:113:113,0:113:3975:0:0:0,-34.0164,-357.474	0/0:84:84,0:84:2929:0:0:0,-25.2865,-262.796	0/0:79:79,0:79:2795:0:0:0,-23.7814,-251.645	0/1:92:55,37:55:1936:37:1315:-88.8273,0,-146.689	0/0:116:115,1:115:4012:1:36:0,-31.371,-357.513	0/0:36:36,0:36:1279:0:0:0,-10.8371,-115.04	0/0:47:47,0:47:1645:0:0:0,-14.1484,-147.485	0/0:78:78,0:78:2764:0:0:0,-23.4803,-247.723	0/0:101:100,0:100:3543:0:0:0,-30.103,-318.14	0/1:128:70,58:70:2480:58:2063:-141.718,0,-184.203	0/1:58:21,37:21:752:37:1300:-98.2148,0,-50.4466	0/0:55:55,0:55:1910:0:0:0,-16.5566,-171.807	0/0:103:103,0:103:3587:0:0:0,-31.0061,-322.716
chr04	25578580	.	GAAC	AAAT,GAGT	170496	PASS	AB=0.505435,0.488829;ABP=3.86001,6.60057;AC=148,40;AF=0.787234,0.212766;AN=188;AO=6222,1624;CIGAR=1X2M1X,2M2X;DP=7890;DPB=7890;DPRA=0,1.05039;EPP=12433.3,3273.72;EPPR=9.52472;GTI=1;LEN=4,2;MEANALT=1.89362,2.42222;MQM=54.3499,42.9754;MQMR=60;NS=94;NUMALT=2;ODDS=1.49569;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=218663,55746;QR=108;RO=3;RPL=6096,1594;RPP=12441.7,3273.72;RPPR=9.52472;RPR=126,30;RUN=1,1;SAF=1,0;SAP=13505.2,3529.48;SAR=6221,1624;SRF=0;SRP=9.52472;SRR=3;TYPE=complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:27:0,14,13:0:0:14,13:497,455:-76.2443,-36.0295,-31.815,-40.5602,0,-36.6468	1/1:170:0,170,0:0:0:170,0:5996,0:-538.177,-51.1751,0,-538.177,-51.1751,-538.177	1/1:119:0,118,0:0:0:118,0:4157,0:-371.974,-35.5215,0,-371.974,-35.5215,-371.974	1/1:145:0,145,0:0:0:145,0:5046,0:-453.876,-43.6494,0,-453.876,-43.6494,-453.876	1/2:49:0,43,6:0:0:43,6:1519,203:-139.741,-16.4591,-3.5148,-123.616,0,-121.81	1/1:32:0,29,0:0:0:29,0:998,0:-89.3567,-8.72987,0,-89.3567,-8.72987,-89.3567	1/2:81:0,40,41:0:0:40,41:1412,1395:-226.794,-111.971,-99.9297,-115.168,0,-102.825	1/2:175:0,88,87:0:0:88,87:3112,2969:-484.41,-232.056,-205.566,-252.694,0,-226.504	1/1:57:0,57,0:0:0:57,0:1979,0:-177.327,-17.1587,0,-177.327,-17.1587,-177.327	1/1:97:0,97,0:0:0:97,0:3399,0:-305.961,-29.1999,0,-305.961,-29.1999,-305.961	1/2:135:0,63,72:0:0:63,72:2173,2520:-377.284,-200.863,-181.898,-176.765,0,-155.09	1/1:67:0,67,0:0:0:67,0:2349,0:-211.174,-20.169,0,-211.174,-20.169,-211.174	1/1:67:0,66,0:0:0:66,0:2307,0:-206.631,-19.868,0,-206.631,-19.868,-206.631	1/1:136:0,135,0:0:0:135,0:4798,0:-430.842,-40.6391,0,-430.842,-40.6391,-430.842	1/1:58:0,58,0:0:0:58,0:2051,0:-184.641,-17.4597,0,-184.641,-17.4597,-184.641	1/2:68:0,34,33:0:0:34,33:1181,1123:-184.667,-88.8531,-78.618,-95.8689,0,-85.9349	1/1:130:0,130,0:0:0:130,0:4575,0:-410.357,-39.1339,0,-410.357,-39.1339,-410.357	1/2:94:0,53,41:0:0:53,41:1871,1439:-264.6,-112.661,-96.7063,-152.284,0,-139.941	1/2:47:0,25,22:0:0:25,22:875,746:-129.327,-58.9048,-51.379,-70.7593,0,-64.1366	1/2:184:0,96,85:0:0:96,85:3370,2922:-506.732,-232.664,-203.765,-274.125,0,-248.537	1/2:133:0,82,49:0:0:82,49:2891,1688:-368.355,-133.983,-109.299,-234.432,0,-219.682	1/1:47:0,47,0:0:0:47,0:1648,0:-148.559,-14.1484,0,-148.559,-14.1484,-148.559	1/2:24:0,8,16:0:0:8,16:282,550:-67.2235,-44.2697,-41.8614,-23.3015,0,-18.485	1/2:61:0,23,38:0:0:23,38:820,1337:-171.544,-104.795,-97.8712,-67.0989,0,-55.6597	1/1:35:0,35,0:0:0:35,0:1253,0:-112.919,-10.5361,0,-112.919,-10.5361,-112.919	1/2:193:0,95,93:0:0:95,93:3349,3085:-519.319,-246.742,-218.144,-272.647,0,-244.652	1/2:158:0,74,84:0:0:74,84:2607,2953:-442.242,-230.986,-208.71,-211.601,0,-186.314	1/2:25:0,10,15:0:0:10,15:347,514:-69.3412,-41.2103,-38.2,-28.473,0,-23.9575	1/1:181:0,179,0:0:0:179,0:6399,0:-575.356,-53.8844,0,-575.356,-53.8844,-575.356	1/2:124:0,62,62:0:0:62,62:2190,2076:-342.605,-164.64,-145.976,-178.306,0,-159.642	1/1:52:0,52,0:0:0:52,0:1813,0:-162.903,-15.6536,0,-162.903,-15.6536,-162.903	1/2:9:0,2,7:0:0:2,7:72,239:-25.1414,-19.2701,-18.668,-6.22497,0,-4.11776	1/2:16:0,4,12:0:0:4,12:143,404:-43.8211,-32.1714,-30.9673,-11.9994,0,-8.38705	1/1:5:0,5,0:0:0:5,0:168,0:-15.4042,-1.50515,0,-15.4042,-1.50515,-15.4042	1/1:8:0,8,0:0:0:8,0:287,0:-26.1121,-2.40824,0,-26.1121,-2.40824,-26.1121	1/1:8:0,8,0:0:0:8,0:287,0:-26.1121,-2.40824,0,-26.1121,-2.40824,-26.1121	1/1:138:0,138,0:0:0:138,0:4862,0:-437.375,-41.5421,0,-437.375,-41.5421,-437.375	1/1:88:0,87,1:0:0:87,1:3067,34:-275.427,-26.1896,0,-272.715,-23.1421,-272.414	1/1:110:1,108,0:1:36:108,0:3819,0:-338.416,-29.5423,0,-338.717,-32.5112,-341.655	1/2:5:0,3,2:0:0:3,2:108,72:-14.8907,-6.08786,-5.18477,-9.15779,0,-8.55573	1/2:142:0,57,83:0:0:57,83:2023,2842:-388.378,-223.79,-206.631,-164.651,0,-139.665	1/2:34:0,21,13:0:0:21,13:749,448:-96.7047,-35.9206,-29.599,-61.1283,0,-57.2149	1/2:94:0,47,47:0:0:47,47:1645,1623:-262.409,-128.853,-114.705,-133.899,0,-119.751	1/2:68:0,36,32:0:0:36,32:1254,1140:-193.148,-91.3348,-80.4977,-102.162,0,-92.5291	1/1:55:0,54,0:0:0:54,0:1887,0:-169.795,-16.2556,0,-169.795,-16.2556,-169.795	1/1:42:0,42,0:0:0:42,0:1465,0:-130.538,-12.6433,0,-130.538,-12.6433,-130.538	1/1:141:0,139,0:0:0:139,0:4891,0:-437.339,-41.8432,0,-437.339,-41.8432,-437.339	1/2:113:0,56,57:0:0:56,57:1977,1906:-312.453,-151.728,-134.871,-161.066,0,-143.907	1/2:65:0,29,36:0:0:29,36:1019,1244:-182.459,-99.5857,-90.8559,-83.2193,0,-72.3822	1/1:165:0,164,0:0:0:164,0:5812,0:-521.17,-49.3689,0,-521.17,-49.3689,-521.17	1/1:104:0,103,0:0:0:103,0:3598,0:-323.623,-31.0061,0,-323.623,-31.0061,-323.623	1/1:13:0,13,0:0:0:13,0:454,0:-40.9382,-3.91339,0,-40.9382,-3.91339,-40.9382	1/1:130:0,129,1:0:0:129,1:4561,36:-409.015,-38.8329,0,-406.183,-35.6532,-405.882	1/2:36:0,18,18:0:0:18,18:642,622:-102.776,-50.4415,-45.0229,-52.6845,0,-47.266	1/1:22:0,22,0:0:0:22,0:787,0:-70.9469,-6.62266,0,-70.9469,-6.62266,-70.9469	1/2:135:0,64,70:0:0:64,70:2240,2429:-374.085,-192.343,-173.078,-181.834,0,-160.762	1/2:14:0,9,5:0:0:9,5:318,158:-38.7582,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chr04	26680235	.	G	A	37186.5	PASS	AB=0.491546;ABP=6.57164;AC=35;AF=0.18617;AN=188;AO=2840;CIGAR=1X;DP=13027;DPB=13027;DPRA=1.47534;EPP=698.888;EPPR=2080.15;GTI=1;LEN=1;MEANALT=1.02381;MQM=24.4725;MQMR=44.2281;NS=94;NUMALT=1;ODDS=2.18893;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101283;QR=358299;RO=10183;RPL=307;RPP=3791.68;RPPR=10653;RPR=2533;RUN=1;SAF=1250;SAP=91.3984;SAR=1590;SRF=5089;SRP=3.01563;SRR=5094;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:108:108,0:108:3784:0:0:0,-32.5112,-331.277	0/1:167:81,86:81:2871:86:3044:-135.874,0,-200.175	0/0:245:245,0:245:8587:0:0:0,-73.7523,-750.688	0/0:268:267,1:267:9414:1:36:0,-78.9814,-828.345	0/0:136:132,4:132:4652:4:144:0,-32.5859,-398.002	0/0:66:66,0:66:2313:0:0:0,-19.868,-200.221	0/1:164:84,80:84:2965:80:2868:-126.481,0,-212.529	0/0:258:258,0:258:9031:0:0:0,-77.6657,-786.727	0/0:197:197,0:197:6907:0:0:0,-59.3029,-604.883	0/0:164:164,0:164:5786:0:0:0,-49.3689,-510.67	0/0:104:102,0:102:3605:0:0:0,-30.7051,-318.171	0/0:111:111,0:111:3866:0:0:0,-33.4143,-340.829	0/1:115:58,57:58:2053:57:2052:-74.379,0,-145.685	0/0:119:119,0:119:4228:0:0:0,-35.8226,-370.682	0/1:96:45,51:45:1593:51:1832:-77.3869,0,-112.815	0/0:112:112,0:112:3945:0:0:0,-33.7154,-347.285	0/0:111:111,0:111:3869:0:0:0,-33.4143,-334.423	0/1:70:42,28:42:1452:28:1000:-37.014,0,-104.802	0/1:77:34,43:34:1211:43:1544:-59.1484,0,-83.8279	0/1:280:125,155:125:4365:155:5533:-244.811,0,-298.046	0/1:192:100,92:100:3518:92:3262:-144.602,0,-249.295	0/1:113:42,71:42:1483:71:2527:-139.907,0,-98.2176	0/0:122:122,0:122:4289:0:0:0,-36.7257,-380.325	0/0:148:141,7:141:4965:7:252:0,-27.5274,-414.387	0/0:147:147,0:147:5158:0:0:0,-44.2514,-452.969	0/1:356:162,194:162:5681:194:6887:-355.948,0,-394.106	0/0:311:311,0:311:10959:0:0:0,-93.6203,-962.05	0/0:37:37,0:37:1302:0:0:0,-11.1381,-115.012	0/1:268:151,116:151:5278:116:4133:-182.75,0,-386.859	0/0:164:162,2:162:5724:2:72:0,-46.149,-500.661	0/0:148:147,0:147:5229:0:0:0,-44.2514,-459.89	0/0:14:14,0:14:491:0:0:0,-4.21442,-43.5444	0/0:42:42,0:42:1508:0:0:0,-12.6433,-133.253	0/1:12:8,4:8:284:4:144:-4.60511,0,-21.5286	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.0703	0/0:28:28,0:28:984:0:0:0,-8.42884,-87.5559	0/1:266:137,129:137:4848:129:4552:-182.165,0,-350.468	0/0:145:145,0:145:5049:0:0:0,-43.6493,-439.355	0/1:69:41,28:41:1418:28:1008:-31.9067,0,-104.591	0/1:5:3,2:3:104:2:72:-2.87849,0,-8.00577	0/1:206:108,98:108:3748:98:3491:-148.421,0,-267.246	0/0:68:68,0:68:2353:0:0:0,-20.47,-206.24	0/0:206:206,0:206:7332:0:0:0,-62.0122,-643.276	0/0:124:124,0:124:4326:0:0:0,-37.3277,-381.986	0/0:93:93,0:93:3266:0:0:0,-27.9958,-287.276	0/0:102:102,0:102:3616:0:0:0,-30.7051,-317.469	0/0:200:200,0:200:6980:0:0:0,-60.206,-608.015	0/1:229:123,106:123:4281:106:3772:-167.229,0,-307.941	0/1:144:74,70:74:2575:70:2499:-115.439,0,-185.256	0/1:261:122,139:122:4304:139:4979:-235.024,0,-302.339	0/1:204:111,93:111:3940:93:3324:-145.198,0,-288.075	0/0:19:19,0:19:680:0:0:0,-5.71957,-60.7001	0/0:234:234,0:234:8306:0:0:0,-70.441,-727.27	0/0:51:51,0:51:1797:0:0:0,-15.3525,-159.697	0/0:14:14,0:14:495:0:0:0,-4.21442,-42.589	0/0:213:213,0:213:7435:0:0:0,-64.1194,-650.303	0/0:34:34,0:34:1179:0:0:0,-10.235,-104.215	0/0:18:18,0:18:635:0:0:0,-5.41854,-56.0886	0/1:31:16,15:16:572:15:536:-24.0732,0,-40.8508	0/0:128:128,0:128:4557:0:0:0,-38.5318,-399.362	0/0:160:160,0:160:5659:0:0:0,-48.1648,-498.612	0/0:16:16,0:16:572:0:0:0,-4.81648,-50.2765	0/0:175:175,0:175:6098:0:0:0,-52.6802,-539.149	0/1:340:184,156:184:6446:156:5551:-243.739,0,-465.52	0/0:114:114,0:114:4019:0:0:0,-34.3174,-352.193	0/0:98:98,0:98:3454:0:0:0,-29.5009,-301.911	0/0:181:178,3:178:6256:3:108:0,-49.7413,-547.397	0/0:156:156,0:156:5533:0:0:0,-46.9607,-486.516	0/0:83:83,0:83:2944:0:0:0,-24.9855,-259.842	0/0:118:118,0:118:4113:0:0:0,-35.5215,-356.416	0/0:108:108,0:108:3803:0:0:0,-32.5112,-337.33	0/0:38:38,0:38:1308:0:0:0,-11.4391,-115.856	0/1:141:83,58:83:2862:58:2088:-68.8539,0,-208.973	0/1:146:74,72:74:2622:72:2563:-99.8624,0,-185.11	0/1:233:111,122:111:3921:122:4333:-179.919,0,-275.103	0/0:239:237,2:237:8390:2:72:0,-66.2827,-730.486	0/1:188:92,96:92:3227:96:3428:-138.662,0,-223.264	0/0:210:209,1:209:7362:1:36:0,-61.423,-641.208	0/0:26:26,0:26:913:0:0:0,-7.82678,-80.9645	0/1:200:114,86:114:3989:86:3080:-110.568,0,-290.182	0/1:159:91,68:91:3203:68:2444:-95.687,0,-229.91	0/1:324:145,179:145:5128:179:6386:-275.006,0,-353.603	0/1:99:52,47:52:1838:47:1671:-82.4266,0,-131.308	0/1:106:53,53:53:1872:53:1900:-76.8587,0,-134.269	0/0:98:98,0:98:3437:0:0:0,-29.5009,-302.427	0/1:187:103,84:103:3653:84:3000:-112.458,0,-266.108	0/1:49:30,19:30:1026:19:676:-24.6819,0,-73.6798	0/0:118:118,0:118:4139:0:0:0,-35.5215,-363.973	0/0:103:103,0:103:3656:0:0:0,-31.0061,-321.146	0/0:91:91,0:91:3196:0:0:0,-27.3937,-280.46	0/1:150:88,62:88:3137:62:2216:-62.1106,0,-232.705	0/1:90:29,61:29:1018:61:2168:-99.3378,0,-61.8244	0/0:169:169,0:169:6002:0:0:0,-50.8741,-528.213	0/0:167:167,0:167:5889:0:0:0,-50.272,-519.791
chr04	26680240	.	AT	GG,GT	303567	PASS	AB=0.650763,0.346658;ABP=921.632,953.329;AC=153,35;AF=0.81383,0.18617;AN=188;AO=10653,1633;CIGAR=2X,1X1M;DP=12311;DPB=12311.5;DPRA=0,1.10762;EPP=23135.7,3549.02;EPPR=9.52472;GTI=5;LEN=2,1;MEANALT=1.69149,2.22222;MQM=43.9987,29.929;MQMR=28.3333;NS=94;NUMALT=2;ODDS=2.3568;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=368733,48468;QR=97;RO=3;RPL=5124,66;RPP=36.4446,2998.93;RPPR=9.52472;RPR=5529,1567;RUN=1,1;SAF=5124,66;SAP=36.4446,2998.93;SAR=5529,1567;SRF=3;SRP=9.52472;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:109:0,109,0:0:0:109,0:3800,0:-333.714,-32.8123,0,-333.714,-32.8123,-333.714	1/2:142:0,85,57:0:0:85,57:2940,1525:-336.566,-105.276,-79.6887,-231.567,0,-214.408	1/1:256:0,256,0:0:0:256,0:8885,0:-775.461,-77.0637,0,-775.461,-77.0637,-775.461	1/1:282:0,281,0:0:0:281,0:9841,0:-867.231,-84.5894,0,-867.231,-84.5894,-867.231	1/1:149:0,147,2:0:0:147,2:5055,58:-442.3,-44.2514,0,-438.224,-39.9149,-437.622	1/1:67:0,67,0:0:0:67,0:2331,0:-201.86,-20.169,0,-201.86,-20.169,-201.86	1/2:135:0,87,47:0:0:87,47:3026,1414:-342.042,-100.525,-74.3351,-241.397,0,-227.249	1/1:274:0,274,0:0:0:274,0:9490,0:-825.894,-82.4822,0,-825.894,-82.4822,-825.894	1/1:212:0,211,0:0:0:211,0:7256,0:-634.498,-63.5173,0,-634.498,-63.5173,-634.498	1/1:175:0,175,0:0:0:175,0:6123,0:-540.054,-52.6803,0,-540.054,-52.6803,-540.054	1/1:111:0,111,0:0:0:111,0:3853,0:-340.738,-33.4143,0,-340.738,-33.4143,-340.738	1/1:113:0,110,1:0:0:110,1:3784,27:-333.551,-33.1133,0,-331.423,-30.9998,-331.122	1/2:86:0,60,26:0:0:60,26:2076,663:-209.323,-45.0416,-26.9798,-164.54,0,-156.714	1/1:123:0,123,0:0:0:123,0:4235,0:-372.896,-37.0267,0,-372.896,-37.0267,-372.896	1/2:69:0,44,25:0:0:44,25:1559,764:-180.016,-54.8817,-41.6364,-125.437,0,-117.911	1/1:112:0,111,1:0:0:111,1:3892,34:-342.478,-33.4143,0,-339.99,-30.6163,-339.689	1/1:114:0,113,1:0:0:113,1:3853,36:-333.413,-34.0164,0,-330.481,-30.726,-330.18	1/2:60:1,43,16:1:25:43,16:1473,426:-141.182,-27.3785,-16.2525,-112.312,0,-109.312	1/2:55:0,37,18:0:0:37,18:1278,485:-133.814,-32.5046,-21.3665,-101.577,0,-96.1582	1/2:216:0,131,85:0:0:131,85:4520,2551:-538.893,-181.549,-142.114,-357.641,0,-332.054	1/2:166:0,104,62:0:0:104,62:3571,1761:-405.337,-123.808,-92.5007,-281.814,0,-263.15	1/2:94:0,43,49:0:0:43,49:1517,1591:-237.501,-115.511,-102.567,-122.046,0,-107.295	1/1:126:0,126,0:0:0:126,0:4390,0:-388.528,-37.9298,0,-388.528,-37.9298,-388.528	1/1:160:0,154,6:0:0:154,6:5230,174:-457.11,-46.3586,0,-444.883,-33.869,-443.077	1/1:156:0,155,0:0:0:155,0:5360,0:-470.57,-46.6597,0,-470.57,-46.6597,-470.57	1/2:311:0,176,135:0:0:176,135:6047,4325:-794.433,-313.27,-260.289,-481.474,0,-440.835	1/1:324:0,323,0:0:0:323,0:11169,0:-981.418,-97.2327,0,-981.418,-97.2327,-981.418	1/1:39:0,39,0:0:0:39,0:1350,0:-119.561,-11.7402,0,-119.561,-11.7402,-119.561	1/2:233:1,158,73:1:36:158,73:5519,2318:-605.884,-165.007,-119.605,-439.01,0,-419.196	1/1:166:0,166,0:0:0:166,0:5779,0:-509.248,-49.971,0,-509.248,-49.971,-509.248	1/1:157:0,157,0:0:0:157,0:5491,0:-482.835,-47.2617,0,-482.835,-47.2617,-482.835	1/1:15:0,15,0:0:0:15,0:534,0:-47.03,-4.51545,0,-47.03,-4.51545,-47.03	1/1:45:0,45,0:0:0:45,0:1587,0:-140.39,-13.5464,0,-140.39,-13.5464,-140.39	1/2:10:0,8,2:0:0:8,2:288,54:-26.704,-3.95681,-1.54857,-23.0088,0,-22.4068	1/1:13:0,13,0:0:0:13,0:460,0:-41.3603,-3.91339,0,-41.3603,-3.91339,-41.3603	1/1:29:0,29,0:0:0:29,0:1010,0:-89.6544,-8.72987,0,-89.6544,-8.72987,-89.6544	1/2:194:0,141,53:0:0:141,53:4840,1721:-513.117,-125.401,-82.956,-388.023,0,-372.069	1/1:157:0,156,0:0:0:156,0:5301,0:-464.013,-46.9607,0,-464.013,-46.9607,-464.013	1/2:51:0,40,11:0:0:40,11:1354,292:-127.305,-20.229,-8.18781,-107.332,0,-104.02	1/2:4:0,3,1:0:0:3,1:108,29:-10.9207,-2.29821,-1.39512,-8.90496,0,-8.60393	1/2:173:0,112,61:0:0:112,61:3915,1745:-431.841,-122.514,-88.7987,-309.613,0,-291.25	1/1:76:0,74,2:0:0:74,2:2533,72:-221.955,-22.2762,0,-216.085,-16.0481,-215.483	1/1:222:0,222,0:0:0:222,0:7714,0:-678.235,-66.8287,0,-678.235,-66.8287,-678.235	1/1:132:0,132,0:0:0:132,0:4514,0:-399.019,-39.736,0,-399.019,-39.736,-399.019	1/1:97:0,97,0:0:0:97,0:3378,0:-297.334,-29.1999,0,-297.334,-29.1999,-297.334	1/1:108:0,108,0:0:0:108,0:3700,0:-325.631,-32.5112,0,-325.631,-32.5112,-325.631	1/1:216:0,216,0:0:0:216,0:7401,0:-643.766,-65.0225,0,-643.766,-65.0225,-643.766	1/2:193:0,128,65:0:0:128,65:4396,1972:-489.123,-140.999,-102.467,-348.418,0,-328.851	1/2:123:0,76,47:0:0:76,47:2636,1432:-313.694,-102.843,-79.9647,-211.152,0,-197.004	1/2:215:0,124,91:0:0:124,91:4285,2790:-541.754,-199.486,-162.159,-342.571,0,-315.178	1/2:173:0,120,53:0:0:120,53:4142,1721:-456.35,-124.963,-88.8392,-331.696,0,-315.741	1/1:19:0,19,0:0:0:19,0:676,0:-60.419,-5.71957,0,-60.419,-5.71957,-60.419	1/1:245:0,244,0:0:0:244,0:8518,0:-745.364,-73.4513,0,-745.364,-73.4513,-745.364	1/1:54:0,53,0:0:0:53,0:1821,0:-161.824,-15.9546,0,-161.824,-15.9546,-161.824	1/1:15:0,15,0:0:0:15,0:533,0:-45.87,-4.51545,0,-45.87,-4.51545,-45.87	1/1:232:0,232,0:0:0:232,0:7948,0:-695.42,-69.839,0,-695.42,-69.839,-695.42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chr04	26707784	.	CGGGGGGTGCA	CGGGGGGGCGCA,CGGGGGGCACC	127562	PASS	AB=0.442463,0.541427;ABP=52.9867,28.918;AC=154,34;AF=0.819149,0.180851;AN=188;AO=4967,978;CIGAR=1M1I6M1X3M,7M2X1M1X;DP=6086;DPB=6552.73;DPRA=0,1.18842;EPP=10788.7,2126.71;EPPR=0;GTI=0;LEN=12,11;MEANALT=2.71277,3.31111;MQM=59.9857,59.1186;MQMR=0;NS=94;NUMALT=2;ODDS=1.48885;PAIRED=0,0;PAIREDR=0;PAO=0,67;PQA=0,2294;PQR=0;PRO=0;QA=174972,33713;QR=0;RO=0;RPL=0,0;RPP=10788.7,2126.71;RPPR=0;RPR=4967,978;RUN=1,1;SAF=4967,978;SAP=10788.7,2126.71;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:26:0,7,18:0:0:7,18:252,618:-70.7118,-50.1456,-48.0384,-20.5619,0,-15.1434	1/1:76:0,76,0:0:0:76,0:2708,0:-243.965,-22.8783,0,-243.965,-22.8783,-243.965	1/1:55:0,54,0:0:0:54,0:1879,0:-169.024,-16.2556,0,-169.024,-16.2556,-169.024	1/1:78:0,76,0:0:0:76,0:2668,0:-240.033,-22.8783,0,-240.033,-22.8783,-240.033	1/2:31:0,16,14:0:0:16,14:534,484:-82.6136,-39.3891,-34.5726,-43.2989,0,-39.0845	1/2:14:0,3,11:0:0:3,11:108,385:-40.4882,-31.6739,-30.7708,-9.17208,0,-5.86075	1/2:67:0,21,46:0:0:21,46:714,1596:-187.954,-130.044,-123.723,-58.2514,0,-44.4041	1/2:49:0,24,25:0:0:24,25:841,885:-140.609,-72.1793,-64.9546,-68.7816,0,-61.2559	1/1:55:0,53,0:0:0:53,0:1877,0:-168.86,-15.9546,0,-168.86,-15.9546,-168.86	1/1:24:0,23,0:0:0:23,0:820,0:-73.7628,-6.92369,0,-73.7628,-6.92369,-73.7628	1/1:43:0,38,2:0:0:38,2:1340,72:-120.555,-11.4391,0,-114.68,-5.55366,-114.078	1/1:11:0,11,0:0:0:11,0:396,0:-35.6229,-3.31133,0,-35.6229,-3.31133,-35.6229	1/1:17:0,17,0:0:0:17,0:604,0:-54.331,-5.11751,0,-54.331,-5.11751,-54.331	1/1:13:0,13,0:0:0:13,0:452,0:-41.0111,-3.91339,0,-41.0111,-3.91339,-41.0111	1/1:14:0,13,0:0:0:13,0:460,0:-41.3807,-3.91339,0,-41.3807,-3.91339,-41.3807	1/2:16:0,6,10:0:0:6,10:201,322:-42.5571,-26.2762,-24.47,-16.6109,0,-13.6006	1/1:18:0,18,0:0:0:18,0:625,0:-56.5725,-5.41854,0,-56.5725,-5.41854,-56.5725	1/1:10:0,9,0:0:0:9,0:309,0:-27.8364,-2.70927,0,-27.8364,-2.70927,-27.8364	1/2:32:0,24,8:0:0:24,8:860,279:-92.822,-22.6769,-15.4522,-70.1374,0,-67.7291	1/2:85:0,32,52:0:0:32,52:1133,1805:-238.987,-146.695,-137.062,-92.3034,0,-76.6498	1/2:83:0,36,46:0:0:36,46:1292,1593:-234.772,-129.379,-118.542,-105.387,0,-91.5395	1/1:42:0,41,0:0:0:41,0:1440,0:-129.536,-12.3422,0,-129.536,-12.3422,-129.536	1/2:71:0,27,43:0:0:27,43:968,1470:-198.184,-119.228,-111.1,-78.9499,0,-66.0056	1/2:76:0,34,40:0:0:34,40:1212,1382:-211.03,-112.231,-101.996,-98.7918,0,-86.7506	1/1:25:0,24,0:0:0:24,0:840,0:-75.5588,-7.22472,0,-75.5588,-7.22472,-75.5588	1/2:120:0,44,72:0:0:44,72:1524,2483:-325.437,-201.579,-188.334,-123.854,0,-102.18	1/2:106:0,48,57:0:0:48,57:1697,1968:-298.198,-159.982,-145.533,-138.313,0,-121.154	1/2:12:0,7,5:0:0:7,5:248,169:-33.8907,-13.6811,-11.5738,-20.1979,0,-18.6927	1/1:96:0,94,0:0:0:94,0:3291,0:-296.05,-28.2968,0,-296.05,-28.2968,-296.05	1/2:64:0,34,29:0:0:34,29:1189,1002:-178.147,-81.4161,-71.1811,-96.7571,0,-88.0273	1/2:79:0,21,57:0:0:21,57:732,1976:-220.177,-160.652,-154.33,-59.6277,0,-42.469	1/1:144:0,138,2:0:0:138,2:4853,68:-436.57,-41.5421,0,-431.064,-36.0413,-430.462	1/1:151:0,140,6:0:0:140,6:4875,199:-438.566,-42.1442,0,-422.47,-26.0531,-420.664	1/1:279:0,270,0:0:0:270,0:9501,0:-854.721,-81.2781,0,-854.721,-81.2781,-854.721	1/1:405:0,395,3:0:0:395,3:13919,107:-1252.16,-118.907,0,-1243.43,-110.181,-1242.53	1/1:331:0,318,0:0:0:318,0:11215,0:-1008.87,-95.7275,0,-1008.87,-95.7275,-1008.87	1/1:29:0,29,0:0:0:29,0:1024,0:-92.1134,-8.72987,0,-92.1134,-8.72987,-92.1134	1/1:67:0,62,2:0:0:62,2:2196,72:-197.547,-18.6639,0,-191.672,-12.789,-191.07	1/1:96:0,96,0:0:0:96,0:3385,0:-304.508,-28.8989,0,-304.508,-28.8989,-304.508	1/1:146:0,145,0:0:0:145,0:5168,0:-464.903,-43.6494,0,-464.903,-43.6494,-464.903	1/2:52:0,17,35:0:0:17,35:593,1245:-149.982,-101.756,-96.6386,-48.5772,0,-38.0412	1/2:27:0,21,5:0:0:21,5:748,179:-75.5809,-14.6124,-8.29073,-60.983,0,-59.4779	1/2:69:0,25,43:0:0:25,43:896,1497:-194.764,-121.684,-114.158,-73.1132,0,-60.1689	1/2:16:0,5,11:0:0:5,11:176,390:-46.4546,-32.1274,-30.6222,-14.6799,0,-11.3685	1/1:16:0,15,0:0:0:15,0:520,0:-46.7689,-4.51545,0,-46.7689,-4.51545,-46.7689	1/1:34:0,34,0:0:0:34,0:1193,0:-107.673,-10.235,0,-107.673,-10.235,-107.673	1/1:38:0,37,0:0:0:37,0:1309,0:-117.75,-11.1381,0,-117.75,-11.1381,-117.75	1/2:57:0,23,33:0:0:23,33:820,1116:-157.258,-90.4081,-83.4844,-66.8391,0,-56.9052	1/2:49:0,24,25:0:0:24,25:833,860:-137.881,-70.1666,-62.9419,-68.0602,0,-60.5344	1/1:29:0,29,0:0:0:29,0:1032,0:-93.1935,-8.72987,0,-93.1935,-8.72987,-93.1935	1/1:94:0,89,0:0:0:89,0:3172,0:-285.397,-26.7917,0,-285.397,-26.7917,-285.397	1/1:179:0,174,0:0:0:174,0:6075,0:-546.513,-52.3792,0,-546.513,-52.3792,-546.513	1/1:56:0,56,0:0:0:56,0:1951,0:-175.501,-16.8577,0,-175.501,-16.8577,-175.501	1/2:18:0,8,9:0:0:8,9:284,295:-46.9861,-23.831,-21.4227,-23.2157,0,-20.5064	1/1:235:0,228,0:0:0:228,0:8064,0:-725.451,-68.6348,0,-725.451,-68.6348,-725.451	1/2:34:0,18,15:0:0:18,15:636,531:-95.021,-43.2252,-37.8067,-51.79,0,-47.2746	1/2:31:0,17,13:0:0:17,13:608,450:-86.112,-36.5291,-31.4116,-49.574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chr04	26707813	.	T	C	16441.2	PASS	AB=0.534502;ABP=21.291;AC=34;AF=0.180851;AN=188;AO=991;CIGAR=1X;DP=6317;DPB=6317;DPRA=1.29572;EPP=2035.05;EPPR=10152.9;GTI=1;LEN=1;MEANALT=1;MQM=59.1695;MQMR=59.9799;NS=94;NUMALT=1;ODDS=1.81908;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=35207;QR=190165;RO=5325;RPL=14;RPP=2035.05;RPPR=10152.9;RPR=977;RUN=1;SAF=991;SAP=2154.94;SAR=0;SRF=5325;SRP=11566.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:26:8,18:8:288:18:628:-48.9898,0,-18.4406	0/0:78:77,1:77:2742:1:36:0,-19.8821,-243.424	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.422	0/0:77:77,0:77:2755:0:0:0,-23.1793,-248.105	0/1:33:17,16:17:612:16:550:-39.8827,0,-45.4794	0/1:17:5,12:5:167:12:428:-33.7413,0,-10.2409	0/1:69:23,46:23:828:46:1642:-127.25,0,-54.073	0/1:50:25,25:25:885:25:892:-65.5129,0,-64.915	0/0:59:59,0:59:2120:0:0:0,-17.7608,-191.068	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:46:44,2:44:1546:2:72:0,-7.01066,-132.591	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:21:21,0:21:743:0:0:0,-6.32163,-67.1933	0/0:16:16,0:16:561:0:0:0,-4.81648,-50.8171	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:16:6,10:6:216:10:331:-25.2921,0,-14.974	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:33:25,8:25:887:8:284:-15.9516,0,-70.2119	0/1:84:32,52:32:1152:52:1849:-141.36,0,-78.7036	0/1:85:39,46:39:1396:46:1652:-123.267,0,-100.352	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:74:32,42:32:1144:42:1508:-113.682,0,-80.9933	0/1:80:39,41:39:1396:41:1449:-106.598,0,-101.857	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/1:120:48,72:48:1716:72:2574:-195.671,0,-118.496	0/1:103:46,57:46:1643:57:2036:-152.506,0,-117.147	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	0/0:102:102,0:102:3660:0:0:0,-30.7051,-329.603	0/1:68:37,31:37:1328:31:1108:-79.5279,0,-99.3522	0/1:79:20,59:20:703:59:2090:-164.5,0,-39.7945	0/0:149:147,2:147:5252:2:72:0,-38.0403,-466.005	0/0:153:145,8:145:5192:8:284:0,-20.1542,-441.516	0/0:286:286,0:286:10244:0:0:0,-86.0946,-921.883	0/0:416:413,3:413:14718:3:104:0,-115.526,-1314.65	0/0:339:338,0:338:12120:0:0:0,-101.748,-1090.08	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.863	0/0:66:64,2:64:2292:2:72:0,-13.0313,-199.705	0/0:101:101,0:101:3608:0:0:0,-30.404,-324.927	0/0:151:151,0:151:5409:0:0:0,-45.4555,-486.938	0/1:52:18,34:18:640:34:1207:-93.2278,0,-42.2758	0/1:31:26,5:26:936:5:180:-7.22014,0,-75.2275	0/1:70:28,42:28:991:42:1499:-114.058,0,-68.4314	0/1:16:5,11:5:180:11:396:-31.1663,0,-11.7356	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/1:57:24,33:24:856:33:1179:-89.2017,0,-60.2024	0/1:48:24,24:24:855:24:855:-62.7894,0,-62.8207	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:103:101,2:101:3599:2:72:0,-24.1694,-317.281	0/0:185:185,0:185:6572:0:0:0,-55.6905,-591.563	0/0:56:55,1:55:1953:1:36:0,-13.2594,-172.446	0/1:16:8,8:8:284:8:276:-20.3535,0,-21.0869	0/0:250:249,1:249:8851:1:36:0,-71.6592,-792.976	0/1:33:17,16:17:604:16:560:-40.7919,0,-44.7566	0/1:34:21,13:21:752:13:445:-30.134,0,-57.7712	0/0:70:68,2:68:2423:2:72:0,-14.2354,-211.489	0/0:146:142,4:142:5065:4:144:0,-30.6368,-442.681	0/1:38:13,25:13:468:25:890:-68.9517,0,-31.0205	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:145:145,0:145:5166:0:0:0,-43.6493,-465.082	0/1:36:4,32:4:144:32:1129:-91.0075,0,-2.47654	0/1:87:32,55:32:1133:55:1957:-150.179,0,-76.087	0/1:32:21,11:21:752:11:396:-26.3095,0,-58.3733	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:76:73,3:73:2608:3:99:0,-13.6417,-225.732	0/0:54:52,2:52:1860:2:72:0,-9.4189,-160.843	0/0:59:59,0:59:2111:0:0:0,-17.7608,-190.258	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:105:103,2:103:3664:2:72:0,-24.7714,-323.129	0/1:45:19,26:19:680:26:936:-71.0085,0,-47.9828	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:65:65,0:65:2299:0:0:0,-19.5669,-207.171	0/0:72:72,0:72:2571:0:0:0,-21.6742,-231.639	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:213:203,10:203:7260:10:341:0,-33.1041,-622.435	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.844	0/0:94:94,0:94:3368:0:0:0,-28.2968,-303.336	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/1:13:8,5:8:284:5:180:-12.6387,0,-21.99	0/1:48:23,25:23:811:25:882:-65.0359,0,-58.8605	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/0:103:103,0:103:3696:0:0:0,-31.0061,-332.842	0/1:142:119,23:119:4208:23:816:-30.993,0,-336.155	0/1:20:3,17:3:108:17:603:-48.5219,0,-4.05457	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:13:12,1:12:432:1:36:0,-0.315115,-35.6229
chr04	27233421	.	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chr04	27325152	.	A	T	256765	PASS	AB=0.574899;ABP=207.612;AC=148;AF=0.787234;AN=188;AO=9297;CIGAR=1X;DP=11099;DPB=11099;DPRA=0;EPP=20139.1;EPPR=3896.48;GTI=2;LEN=1;MEANALT=1.01064;MQM=59.9644;MQMR=59.9756;NS=94;NUMALT=1;ODDS=2.07174;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=332327;QR=63650;RO=1801;RPL=5194;RPP=281.021;RPPR=16.8144;RPR=4103;RUN=1;SAF=5198;SAP=285.113;SAR=4099;SRF=956;SRP=17.8658;SRR=845;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:89:41,48:41:1460:48:1709:-127.302,0,-104.904	1/1:106:3,103:3:108:103:3683:-321.597,-21.834,0	1/1:260:0,260:0:0:260:9274:-834.619,-78.2678,0	1/1:326:0,326:0:0:326:11643:-1047.72,-98.1358,0	0/1:70:41,29:41:1440:29:1036:-72.4772,0,-108.824	0/1:38:15,23:15:536:23:819:-62.5924,0,-37.1357	0/1:39:15,24:15:528:24:860:-65.9817,0,-36.1112	0/1:241:112,129:112:3988:129:4594:-341.076,0,-286.564	1/1:220:2,218:2:68:218:7800:-695.57,-59.7689,0	1/1:128:0,128:0:0:128:4559:-409.776,-38.5318,0	0/1:71:25,46:25:888:46:1648:-127.235,0,-58.8659	1/1:153:0,153:0:0:153:5411:-487.123,-46.0576,0	1/1:142:0,142:0:0:142:5091:-458.332,-42.7463,0	1/1:66:0,66:0:0:66:2368:-213.378,-19.868,0	1/1:147:0,147:0:0:147:5279:-475.244,-44.2514,0	0/1:86:48,38:48:1690:38:1368:-97.5322,0,-126.485	1/1:72:0,72:0:0:72:2575:-231.999,-21.6742,0	1/1:47:0,47:0:0:47:1682:-151.667,-14.1484,0	0/1:54:26,28:26:907:28:998:-73.8786,0,-65.6887	0/1:186:64,122:64:2265:122:4367:-337.212,0,-148.12	0/1:236:98,138:98:3462:138:4948:-374.426,0,-240.752	1/1:71:0,71:0:0:71:2548:-229.57,-21.3731,0	0/1:84:38,46:38:1355:46:1648:-123.322,0,-96.9632	0/1:69:22,47:22:776:47:1686:-131.256,0,-49.3911	1/1:131:0,131:0:0:131:4618:-415.782,-39.4349,0	0/1:259:92,167:92:3255:167:5991:-461.298,0,-215.207	0/1:260:101,159:101:3539:159:5693:-434.22,0,-240.452	0/1:57:31,26:31:1108:26:928:-66.6795,0,-82.8723	1/1:372:1,371:1:36:371:13241:-1187.89,-108.385,0	0/1:73:25,48:25:892:48:1720:-133.11,0,-58.6245	0/1:108:41,67:41:1433:67:2404:-184.105,0,-96.7525	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:6:3,3:3:104:3:108:-8.26899,0,-7.89663	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:16:0,16:0:0:16:569:-51.5402,-4.81648,0	1/1:5:0,5:0:0:5:170:-15.6335,-1.50515,0	1/1:255:0,255:0:0:255:9096:-818.616,-76.7627,0	1/1:61:0,61:0:0:61:2188:-197.186,-18.3628,0	1/1:54:0,54:0:0:54:1934:-174.336,-16.2556,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:181:75,106:75:2608:106:3766:-284.649,0,-180.478	0/1:43:24,19:24:856:19:680:-48.5849,0,-64.4168	0/1:219:73,146:73:2572:146:5223:-404.281,0,-165.804	0/1:100:60,40:60:2144:40:1440:-99.7947,0,-163.125	1/1:83:0,83:0:0:83:2963:-266.902,-24.9855,0	1/1:107:0,107:0:0:107:3835:-345.345,-32.2102,0	1/1:190:0,190:0:0:190:6806:-612.61,-57.1957,0	0/1:211:94,117:94:3340:117:4175:-312.416,0,-237.302	0/1:127:57,70:57:2023:70:2516:-188.461,0,-144.111	1/1:191:0,191:0:0:191:6852:-616.748,-57.4967,0	1/1:58:0,58:0:0:58:2067:-186.3,-17.4597,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:160:0,160:0:0:160:5732:-515.987,-48.1648,0	0/1:43:19,24:19:680:24:823:-61.4356,0,-48.5849	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:190:70,120:70:2452:120:4274:-327.483,0,-163.742	0/1:34:17,17:17:596:17:602:-44.2746,0,-43.7328	0/1:10:5,5:5:176:5:180:-13.5418,0,-13.1747	0/1:19:5,14:5:180:14:500:-39.6166,0,-10.8325	0/1:89:33,56:33:1163:56:1979:-151.589,0,-78.1134	1/1:98:0,98:0:0:98:3516:-316.649,-29.5009,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:150:63,87:63:2220:87:3128:-236.59,0,-154.908	0/1:142:62,80:62:2181:80:2876:-216.33,0,-153.809	1/1:60:0,60:0:0:60:2152:-193.947,-18.0618,0	1/1:119:0,119:0:0:119:4226:-380.502,-35.8226,0	1/1:207:1,206:1:36:206:7395:-661.995,-58.7149,0	1/1:173:0,173:0:0:173:6212:-559.166,-52.0782,0	1/1:58:1,57:1:36:57:2040:-180.274,-13.8615,0	1/1:74:0,74:0:0:74:2636:-237.486,-22.2762,0	1/1:60:0,60:0:0:60:2147:-192.719,-18.0618,0	0/1:25:13,12:13:460:12:432:-31.6954,0,-34.2096	0/1:80:31,49:31:1084:49:1749:-133.61,0,-73.7831	1/1:162:0,162:0:0:162:5797:-521.834,-48.7669,0	1/1:224:1,223:1:32:223:7974:-714.426,-64.2314,0	1/1:227:0,227:0:0:227:8134:-732.073,-68.3338,0	1/1:179:2,177:2:72:177:6322:-562.229,-47.0476,0	1/1:155:4,151:4:140:151:5392:-472.465,-33.7151,0	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	1/1:206:0,206:0:0:206:7358:-662.267,-62.0122,0	1/1:270:1,269:1:32:269:9621:-862.642,-78.0788,0	1/1:303:0,302:0:0:302:10796:-971.182,-90.9111,0	1/1:95:0,95:0:0:95:3377:-304.143,-28.5979,0	1/1:101:0,101:0:0:101:3632:-327.084,-30.404,0	0/1:86:34,52:34:1216:52:1846:-140.53,0,-83.858	0/1:205:101,104:101:3567:104:3725:-273.739,0,-259.528	1/1:38:0,38:0:0:38:1355:-122.25,-11.4391,0	1/1:80:0,80:0:0:80:2854:-257.097,-24.0824,0	1/1:104:0,104:0:0:104:3713:-334.371,-31.3071,0	1/1:56:0,56:0:0:56:2008:-180.993,-16.8577,0	0/1:84:40,44:40:1420:44:1567:-116.034,0,-102.811	0/1:117:64,53:64:2274:53:1895:-135.607,0,-169.698	1/1:190:0,190:0:0:190:6819:-613.778,-57.1957,0	1/1:197:0,197:0:0:197:7022:-631.97,-59.3029,0
chr04	27325171	.	C	A	237271	PASS	AB=0.561983;ABP=140.298;AC=148;AF=0.787234;AN=188;AO=8870;CIGAR=1X;DP=10690;DPB=10690;DPRA=0;EPP=230.512;EPPR=22.2859;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.9649;MQMR=59.9758;NS=94;NUMALT=1;ODDS=1.89793;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=308611;QR=64521;RO=1817;RPL=8862;RPP=19194.5;RPPR=3931.22;RPR=8;RUN=1;SAF=4909;SAP=223.023;SAR=3961;SRF=970;SRP=21.0908;SRR=847;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:87:40,47:40:1418:47:1640:-121.698,0,-101.726	1/1:102:3,99:3:104:99:3436:-299.758,-21.0023,0	1/1:255:0,255:0:0:255:8891:-800.188,-76.7627,0	1/1:304:0,304:0:0:304:10477:-942.821,-91.5131,0	0/1:70:42,28:42:1500:28:968:-66.356,0,-114.222	0/1:37:15,22:15:540:22:755:-57.1287,0,-37.7984	0/1:37:14,23:14:495:23:776:-59.0128,0,-33.7449	0/1:235:113,122:113:4052:122:4243:-311.316,0,-294.125	1/1:202:1,201:1:36:201:6933:-620.462,-57.2098,0	1/1:118:0,118:0:0:118:4098:-368.525,-35.5215,0	0/1:68:25,43:25:888:43:1511:-115.813,0,-59.769	1/1:146:0,146:0:0:146:5057:-455.287,-43.9504,0	1/1:140:0,140:0:0:140:4888:-440.081,-42.1442,0	1/1:60:0,60:0:0:60:2103:-189.54,-18.0618,0	1/1:145:0,145:0:0:145:5078:-457.177,-43.6494,0	0/1:89:48,41:48:1720:41:1429:-102.112,0,-128.265	1/1:70:0,70:0:0:70:2482:-223.633,-21.0721,0	1/1:45:0,45:0:0:45:1582:-142.669,-13.5464,0	0/1:51:25,26:25:896:26:914:-67.2221,0,-65.6078	0/1:181:67,114:67:2370:114:3975:-303.461,0,-159.069	0/1:234:101,133:101:3564:133:4662:-349.311,0,-250.526	1/1:67:0,67:0:0:67:2322:-209.242,-20.169,0	0/1:81:38,43:38:1356:43:1478:-108.928,0,-97.9571	0/1:69:23,46:23:816:46:1616:-124.958,0,-52.9906	1/1:121:0,120:0:0:120:4105:-369.434,-36.1236,0	0/1:253:93,160:93:3307:160:5630:-430.64,0,-221.687	0/1:256:101,155:101:3564:155:5419:-410.79,0,-243.903	0/1:55:31,24:31:1112:24:851:-60.3528,0,-83.8347	1/1:357:1,356:1:36:356:12278:-1101.29,-103.869,0	0/1:69:25,44:25:892:44:1527:-116.95,0,-59.8286	0/1:107:42,65:42:1476:65:2231:-168.844,0,-100.922	0/1:4:2,2:2:72:2:64:-4.87457,0,-5.6326	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:15:0,15:0:0:15:512:-46.4012,-4.51545,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:247:0,247:0:0:247:8633:-776.988,-74.3544,0	1/1:57:0,57:0:0:57:1989:-179.283,-17.1587,0	1/1:53:0,53:0:0:53:1867:-168.309,-15.9546,0	1/1:8:0,8:0:0:8:271:-24.7194,-2.40824,0	0/1:183:81,102:81:2879:102:3542:-263.908,0,-204.259	0/1:44:25,19:25:892:19:664:-46.8392,0,-67.3544	0/1:212:74,138:74:2630:138:4761:-364.846,0,-173.128	0/1:99:59,40:59:2107:40:1420:-98.2954,0,-160.097	1/1:81:0,81:0:0:81:2859:-257.55,-24.3834,0	1/1:101:0,101:0:0:101:3505:-315.669,-30.404,0	1/1:185:0,185:0:0:185:6395:-575.662,-55.6906,0	0/1:206:94,112:94:3330:112:3852:-284.869,0,-237.905	0/1:122:56,66:56:1980:66:2268:-167.655,0,-141.746	1/1:181:0,181:0:0:181:6292:-566.395,-54.4864,0	1/1:53:0,53:0:0:53:1825:-164.529,-15.9546,0	1/1:9:0,9:0:0:9:315:-28.6872,-2.70927,0	1/1:155:0,155:0:0:155:5404:-486.504,-46.6597,0	0/1:43:19,24:19:684:24:835:-62.5222,0,-48.946	1/1:10:0,10:0:0:10:352:-32.0182,-3.0103,0	0/1:182:71,111:71:2501:111:3809:-288.072,0,-170.555	0/1:32:17,15:17:599:15:532:-38.5801,0,-44.6051	0/1:9:4,5:4:140:5:172:-13.1087,0,-10.2353	0/1:18:5,13:5:180:13:441:-34.5947,0,-11.1335	0/1:85:33,52:33:1161:52:1792:-135.969,0,-79.1882	1/1:95:0,95:0:0:95:3317:-298.751,-28.5979,0	1/1:5:0,5:0:0:5:172:-15.818,-1.50515,0	0/1:143:60,83:60:2111:83:2894:-217.652,0,-147.207	0/1:136:62,74:62:2173:74:2553:-189.084,0,-154.896	1/1:60:0,60:0:0:60:2073:-186.838,-18.0618,0	1/1:108:0,108:0:0:108:3753:-337.963,-32.5112,0	1/1:197:1,196:1:36:196:6801:-608.589,-55.7046,0	1/1:164:0,163:0:0:163:5736:-515.997,-49.0679,0	1/1:56:1,55:1:36:55:1944:-171.638,-13.2594,0	1/1:67:0,67:0:0:67:2316:-208.704,-20.169,0	1/1:62:0,62:0:0:62:2200:-197.489,-18.6639,0	0/1:24:12,12:12:432:12:424:-31.2717,0,-31.9965	0/1:78:31,47:31:1094:47:1612:-121.885,0,-75.2875	1/1:160:0,160:0:0:160:5576:-501.973,-48.1648,0	1/1:204:1,203:1:36:203:7037:-629.766,-57.8118,0	1/1:215:0,215:0:0:215:7453:-670.842,-64.7215,0	1/1:174:2,172:2:72:172:6020:-535.078,-45.5425,0	1/1:153:4,149:4:144:149:5206:-455.377,-32.744,0	0/1:13:5,8:5:180:8:288:-22.354,0,-12.6387	1/1:199:0,199:0:0:199:6949:-625.495,-59.905,0	1/1:257:1,256:1:36:256:8919:-799.123,-73.7664,0	1/1:272:0,272:0:0:272:9505:-855.437,-81.8802,0	1/1:87:0,87:0:0:87:3063:-275.902,-26.1896,0	1/1:98:0,97:0:0:97:3423:-307.928,-29.1999,0	0/1:87:34,53:34:1187:53:1854:-140.949,0,-80.9445	0/1:207:104,103:104:3720:103:3576:-259.74,0,-272.688	1/1:37:0,37:0:0:37:1273:-114.869,-11.1381,0	1/1:77:0,77:0:0:77:2649:-238.658,-23.1793,0	1/1:104:0,104:0:0:104:3578:-322.232,-31.3071,0	1/1:56:0,56:0:0:56:1972:-177.755,-16.8577,0	0/1:81:41,40:41:1464:40:1416:-103.354,0,-107.673	0/1:121:67,54:67:2395:54:1912:-135.933,0,-179.382	1/1:175:0,175:0:0:175:6049:-544.537,-52.6803,0	1/1:193:0,193:0:0:193:6768:-609.206,-58.0988,0
chr04	27412316	.	C	G	145469	PASS	AB=0.499588;ABP=3.01567;AC=149;AF=0.792553;AN=188;AO=6768;CIGAR=1X;DP=8603;DPB=8603;DPRA=0;EPP=14699.5;EPPR=3985.49;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.5993;MQMR=59.928;NS=94;NUMALT=1;ODDS=4.90384;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=242629;QR=65218;RO=1834;RPL=6768;RPP=14699.5;RPPR=3985.49;RPR=0;RUN=1;SAF=0;SAP=14699.5;SAR=6768;SRF=0;SRP=3985.49;SRR=1834;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:12,20:12:417:20:716:-55.1348,0,-28.2273	1/1:40:0,40:0:0:40:1440:-129.88,-12.0412,0	1/1:168:0,168:0:0:168:6023:-542.081,-50.573,0	1/1:230:0,230:0:0:230:8244:-741.84,-69.2369,0	0/1:15:13,2:13:459:2:72:-2.32127,0,-37.1253	0/1:37:17,20:17:593:20:716:-53.6263,0,-42.5566	0/1:56:24,32:24:864:32:1152:-87.1325,0,-61.2249	0/1:142:81,61:81:2897:61:2173:-153.071,0,-218.215	1/1:102:1,101:1:36:101:3628:-322.977,-27.1068,0	1/1:87:0,87:0:0:87:3098:-279.034,-26.1896,0	0/1:59:36,23:36:1296:23:828:-57.0657,0,-99.1828	1/1:87:0,87:0:0:87:3119:-280.86,-26.1896,0	1/1:70:0,70:0:0:70:2504:-225.481,-21.0721,0	1/1:64:0,64:0:0:64:2296:-206.855,-19.2659,0	1/1:78:0,78:0:0:78:2800:-252.187,-23.4803,0	0/1:82:45,37:45:1612:37:1332:-95.4604,0,-120.686	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	1/1:31:1,30:1:36:30:1071:-93.0857,-5.73366,0	0/1:33:16,17:16:576:17:597:-44.1221,0,-42.241	0/1:158:72,86:72:2573:86:3077:-229.388,0,-184.255	0/1:194:79,115:79:2814:115:4132:-313.525,0,-195.095	1/1:94:0,94:0:0:94:3372:-303.675,-28.2968,0	0/1:152:65,87:65:2310:87:3109:-234.258,0,-162.394	0/1:47:25,22:25:885:22:792:-57.4573,0,-65.8181	1/1:73:0,73:0:0:73:2628:-236.758,-21.9752,0	0/1:245:127,118:127:4469:118:4248:-308.582,0,-328.626	0/1:162:76,86:76:2721:86:3084:-228.986,0,-196.362	0/1:29:20,9:20:712:9:324:-20.776,0,-55.6768	1/1:240:0,240:0:0:240:8569:-771.137,-72.2472,0	0/1:108:67,41:67:2374:41:1461:-99.2444,0,-181.404	0/1:98:45,52:45:1601:52:1872:-139.184,0,-114.819	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/1:25:14,11:14:504:11:396:-28.457,0,-38.1723	1/1:9:0,9:0:0:9:314:-28.5943,-2.70927,0	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	1/1:34:0,34:0:0:34:1224:-110.439,-10.235,0	1/1:161:0,161:0:0:161:5788:-520.982,-48.4658,0	1/1:171:0,171:0:0:171:6123:-551.124,-51.4761,0	1/1:55:0,55:0:0:55:1973:-177.769,-16.5567,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:140:71,69:71:2522:69:2480:-181.281,0,-185.085	0/1:35:21,14:21:741:14:504:-35.162,0,-56.4755	0/1:103:47,56:47:1669:56:2010:-150.114,0,-119.487	0/1:55:28,27:28:1008:27:942:-68.4882,0,-74.4797	1/1:48:0,48:0:0:48:1712:-154.34,-14.4494,0	1/1:87:0,87:0:0:87:3128:-281.73,-26.1896,0	1/1:89:0,89:0:0:89:3184:-286.766,-26.7917,0	0/1:189:86,103:86:3077:103:3682:-274.674,0,-220.262	0/1:72:26,46:26:936:46:1640:-126.071,0,-62.8853	1/1:172:1,171:1:36:171:6136:-548.577,-48.1789,0	1/1:107:0,107:0:0:107:3836:-345.422,-32.2102,0	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:129:0,129:0:0:129:4623:-416.048,-38.8329,0	0/1:109:61,48:61:2158:48:1724:-122.631,0,-161.671	1/1:15:0,15:0:0:15:540:-48.9342,-4.51545,0	0/1:235:133,102:133:4648:102:3656:-258.411,0,-347.737	0/1:39:25,14:25:885:14:504:-33.5854,0,-68.2264	0/1:11:8,3:8:273:3:108:-6.76384,0,-21.5889	0/1:10:7,3:7:237:3:108:-7.06487,0,-18.6247	0/1:99:43,56:43:1540:56:2016:-151.893,0,-109.091	1/1:107:0,107:0:0:107:3852:-346.854,-32.2102,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:186:91,95:91:3242:95:3420:-252.007,0,-235.998	0/1:203:95,108:95:3382:108:3884:-288.592,0,-243.466	1/1:60:0,60:0:0:60:2153:-194,-18.0618,0	1/1:105:0,105:0:0:105:3772:-339.657,-31.6082,0	1/1:211:6,205:6:216:205:7353:-641.503,-43.7268,0	1/1:202:4,198:4:144:198:7097:-624.946,-47.4944,0	1/1:46:0,46:0:0:46:1646:-148.421,-13.8474,0	1/1:44:0,44:0:0:44:1574:-141.898,-13.2453,0	1/1:35:0,35:0:0:35:1260:-113.696,-10.5361,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:120:54,66:54:1925:66:2355:-176.028,0,-137.371	1/1:79:0,79:0:0:79:2828:-254.691,-23.7814,0	1/1:151:0,151:0:0:151:5416:-487.495,-45.4555,0	1/1:189:0,189:0:0:189:6792:-611.05,-56.8947,0	1/1:40:0,40:0:0:40:1428:-128.806,-12.0412,0	1/1:103:0,103:0:0:103:3704:-333.53,-31.0061,0	0/1:9:4,5:4:129:5:180:-13.8428,0,-9.21839	1/1:120:0,120:0:0:120:4300:-385.687,-36.1236,0	1/1:138:0,138:0:0:138:4944:-444.556,-41.5421,0	1/1:163:0,163:0:0:163:5853:-526.835,-49.0679,0	1/1:39:0,39:0:0:39:1400:-126.192,-11.7402,0	1/1:91:0,91:0:0:91:3272:-293.771,-27.3937,0	0/1:48:20,28:20:716:28:1008:-76.5869,0,-50.3183	0/1:140:72,68:72:2584:68:2440:-177.672,0,-190.665	1/1:24:0,24:0:0:24:860:-77.7195,-7.22472,0	1/1:54:0,54:0:0:54:1931:-174.003,-16.2556,0	1/1:70:0,70:0:0:70:2516:-226.645,-21.0721,0	1/1:79:0,79:0:0:79:2831:-254.874,-23.7814,0	0/1:100:51,49:51:1821:49:1752:-127.752,0,-134.066	0/1:54:38,16:38:1364:16:559:-34.382,0,-106.805	1/1:191:1,190:1:36:190:6781:-606.654,-53.8985,0	1/1:93:0,93:0:0:93:3344:-300.934,-27.9958,0
chr04	27452906	.	A	G	111074	PASS	AB=0.496624;ABP=3.33289;AC=148;AF=0.787234;AN=188;AO=5190;CIGAR=1X;DP=6840;DPB=6840;DPRA=0;EPP=11013.9;EPPR=3482.35;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9717;MQMR=59.9793;NS=94;NUMALT=1;ODDS=4.94017;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=185320;QR=58945;RO=1646;RPL=30;RPP=11013.9;RPPR=3482.35;RPR=5160;RUN=1;SAF=5190;SAP=11273;SAR=0;SRF=1646;SRP=3577.25;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	1/1:52:0,52:0:0:52:1846:-166.419,-15.6536,0	1/1:62:0,62:0:0:62:2220:-200.064,-18.6639,0	1/1:122:0,122:0:0:122:4337:-390.507,-36.7257,0	0/1:42:25,17:25:900:17:600:-41.6859,0,-68.6778	0/1:25:12,13:12:432:13:468:-34.9339,0,-31.6954	0/1:99:76,23:76:2724:23:820:-44.3205,0,-215.601	0/1:109:44,65:44:1584:65:2324:-176.608,0,-110.039	1/1:49:0,49:0:0:49:1760:-158.683,-14.7505,0	1/1:64:0,64:0:0:64:2276:-204.73,-19.2659,0	0/1:68:34,34:34:1216:34:1207:-88.4652,0,-89.2765	1/1:41:0,41:0:0:41:1464:-132.056,-12.3422,0	1/1:85:0,85:0:0:85:3051:-274.818,-25.5876,0	1/1:40:0,40:0:0:40:1440:-129.898,-12.0412,0	1/1:65:0,65:0:0:65:2332:-210.14,-19.567,0	0/1:21:12,9:12:432:9:324:-23.1842,0,-32.8996	1/1:42:0,42:0:0:42:1485:-133.943,-12.6433,0	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	0/1:52:37,15:37:1332:15:539:-33.1926,0,-104.529	0/1:253:99,154:99:3552:154:5499:-418.877,0,-243.727	0/1:143:67,76:67:2404:76:2711:-201.165,0,-173.569	1/1:79:0,79:0:0:79:2808:-252.957,-23.7814,0	0/1:20:11,9:11:392:9:320:-23.1218,0,-29.5995	0/1:24:5,19:5:180:19:684:-54.6656,0,-9.32734	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:214:106,108:106:3804:108:3857:-282.127,0,-278.137	0/1:197:105,92:105:3749:92:3276:-235.756,0,-278.306	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	1/1:136:1,135:1:36:135:4826:-430.895,-37.3418,0	0/1:79:37,42:37:1313:42:1499:-111.422,0,-94.6883	0/1:91:49,42:49:1760:42:1504:-108.261,0,-131.29	0/1:70:32,38:32:1140:38:1358:-101.402,0,-81.8371	0/1:43:14,29:14:500:29:1036:-80.6096,0,-32.3919	1/1:68:0,68:0:0:68:2427:-218.685,-20.47,0	1/1:141:0,141:0:0:141:5028:-452.668,-42.4452,0	1/1:61:0,61:0:0:61:2175:-196.016,-18.3628,0	1/1:113:0,113:0:0:113:4046:-364.327,-34.0164,0	1/1:101:0,101:0:0:101:3623:-326.274,-30.404,0	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	1/1:39:0,39:0:0:39:1392:-125.577,-11.7402,0	0/1:87:38,49:38:1353:49:1756:-132.134,0,-95.8788	0/1:45:20,25:20:720:25:900:-67.7747,0,-51.5824	0/1:92:54,38:54:1932:38:1360:-95.0058,0,-146.458	0/1:59:32,27:32:1148:27:972:-70.0371,0,-85.8691	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	1/1:37:0,37:0:0:37:1320:-119.102,-11.1381,0	1/1:125:0,125:0:0:125:4460:-401.565,-37.6288,0	0/1:141:68,73:68:2432:73:2608:-192.52,0,-176.69	0/1:86:53,33:53:1904:33:1188:-81.34,0,-145.749	1/1:81:0,81:0:0:81:2894:-260.696,-24.3834,0	1/1:51:0,51:0:0:51:1813:-163.45,-15.3525,0	1/1:98:1,97:1:36:97:3435:-305.766,-25.9027,0	1/1:85:0,85:0:0:85:3034:-273.291,-25.5876,0	0/1:27:15,12:15:525:12:428:-30.731,0,-39.4502	1/1:162:0,162:0:0:162:5746:-517.26,-48.7669,0	0/1:92:44,48:44:1580:48:1720:-127.391,0,-114.797	0/1:27:17,10:17:604:10:360:-24.6165,0,-46.5628	0/1:39:14,25:14:500:25:896:-69.2202,0,-33.596	0/1:81:12,69:12:424:69:2468:-197.991,0,-14.113	0/1:49:29,20:29:1036:20:720:-50.3783,0,-78.8034	1/1:81:0,81:0:0:81:2907:-261.865,-24.3834,0	1/1:60:0,60:0:0:60:2147:-193.497,-18.0618,0	0/1:170:85,85:85:3037:85:3043:-222.924,0,-222.355	0/1:143:73,70:73:2608:70:2511:-183.194,0,-191.921	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:34:0,34:0:0:34:1224:-110.467,-10.235,0	1/1:70:1,69:1:36:69:2452:-217.334,-17.4738,0	1/1:77:0,77:0:0:77:2748:-247.563,-23.1793,0	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	1/1:85:0,84:0:0:84:2994:-269.332,-25.2865,0	0/1:62:24,38:24:860:38:1350:-103.136,0,-59.058	0/1:78:47,31:47:1676:31:1116:-77.2714,0,-127.646	1/1:45:0,45:0:0:45:1608:-145.01,-13.5464,0	1/1:65:0,64:0:0:64:2269:-204.2,-19.2659,0	1/1:102:0,102:0:0:102:3647:-328.434,-30.7051,0	1/1:67:0,66:0:0:66:2336:-210.138,-19.868,0	1/1:53:3,50:3:108:50:1800:-152.207,-5.87942,0	0/1:77:43,34:43:1540:34:1211:-86.102,0,-115.714	1/1:51:0,51:0:0:51:1811:-163.271,-15.3525,0	1/1:88:0,88:0:0:88:3141:-282.915,-26.4906,0	1/1:143:0,143:0:0:143:5093:-458.515,-43.0473,0	1/1:39:0,39:0:0:39:1391:-125.488,-11.7402,0	1/1:47:0,47:0:0:47:1662:-149.865,-14.1484,0	0/1:90:49,41:49:1760:41:1468:-105.323,0,-131.591	0/1:69:45,24:45:1616:24:851:-56.1384,0,-124.941	1/1:26:0,26:0:0:26:928:-83.8383,-7.82678,0	1/1:45:0,45:0:0:45:1608:-145.01,-13.5464,0	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	1/1:66:0,65:0:0:65:2321:-208.79,-19.567,0	0/1:84:32,52:32:1148:52:1860:-142.393,0,-78.3433	0/1:92:72,20:72:2588:20:711:-36.6209,0,-205.473	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:50:0,50:0:0:50:1788:-161.203,-15.0515,0
chr04	27452909	.	A	G	29507.4	PASS	AB=0.502595;ABP=3.20192;AC=40;AF=0.212766;AN=188;AO=1655;CIGAR=1X;DP=6902;DPB=6902;DPRA=1.27603;EPP=3175.62;EPPR=9601.47;GTI=0;LEN=1;MEANALT=1.04348;MQM=59.9795;MQMR=59.9668;NS=94;NUMALT=1;ODDS=5.85805;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59076;QR=188070;RO=5245;RPL=50;RPP=3175.62;RPPR=9609.44;RPR=1605;RUN=1;SAF=1655;SAP=3596.8;SAR=0;SRF=5244;SRP=11383.7;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.278	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/0:127:127,0:127:4544:0:0:0,-38.2308,-409.127	0/1:40:16,24:16:576:24:847:-64.5075,0,-40.1338	0/1:23:12,11:12:428:11:396:-29.0591,0,-31.9351	0/1:101:23,78:23:824:78:2781:-220.127,0,-44.0793	0/1:113:68,45:68:2444:45:1607:-110.903,0,-186.198	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/1:73:36,37:36:1287:37:1324:-97.4869,0,-94.1576	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03	0/0:42:42,0:42:1499:0:0:0,-12.6433,-135.204	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.78	0/1:22:11,11:11:381:11:396:-29.3601,0,-27.998	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/0:49:49,0:49:1755:0:0:0,-14.7505,-158.233	0/1:52:14,37:14:500:37:1327:-104.03,0,-29.6333	0/1:255:154,101:154:5517:101:3632:-250.321,0,-419.733	0/1:142:77,65:77:2764:65:2315:-165.864,0,-206.207	0/0:78:78,0:78:2789:0:0:0,-23.4803,-251.235	0/1:20:9,11:9:320:11:396:-29.9621,0,-23.1218	0/1:23:18,5:18:644:5:180:-9.62837,0,-51.3669	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/1:218:108,110:108:3876:110:3927:-287.998,0,-282.632	0/1:199:94,105:94:3376:105:3745:-277.345,0,-244.149	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/0:136:135,1:135:4848:1:36:0,-37.3418,-432.874	0/1:78:40,38:40:1440:38:1360:-99.2203,0,-106.417	0/1:90:42,48:42:1504:48:1702:-126.372,0,-108.562	0/1:72:38,34:38:1364:34:1210:-87.5318,0,-101.28	0/1:46:32,14:32:1148:14:504:-31.8507,0,-89.7825	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.691	0/0:143:143,0:143:5102:0:0:0,-43.0473,-459.321	0/0:62:62,0:62:2232:0:0:0,-18.6639,-201.143	0/0:116:116,0:116:4172:0:0:0,-34.9195,-375.66	0/0:102:102,0:102:3664:0:0:0,-30.7051,-329.963	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.658	0/1:87:48,39:48:1724:39:1400:-100.11,0,-129.256	0/1:44:25,19:25:900:19:680:-48.2838,0,-68.0757	0/1:90:37,53:37:1328:53:1889:-143.194,0,-92.7295	0/1:59:27,32:27:972:32:1152:-86.2294,0,-70.0371	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:128:128,0:128:4604:0:0:0,-38.5318,-414.448	0/1:142:73,69:73:2624:69:2460:-178.908,0,-193.657	0/1:88:34,54:34:1224:54:1914:-146.045,0,-83.9764	0/0:82:82,0:82:2948:0:0:0,-24.6845,-265.553	0/0:52:52,0:52:1856:0:0:0,-15.6536,-167.32	0/0:97:96,1:96:3433:1:36:0,-25.6016,-305.583	0/0:86:85,1:85:3037:1:30:0,-22.889,-270.559	0/1:29:12,17:12:432:17:604:-45.9607,0,-30.4913	0/0:162:162,0:162:5788:0:0:0,-48.7669,-521.036	0/1:91:50,41:50:1792:41:1458:-104.121,0,-134.169	0/1:27:10,17:10:360:17:603:-46.4717,0,-24.6165	0/1:39:25,14:25:900:14:500:-33.596,0,-69.5808	0/1:81:70,11:70:2493:11:396:-11.5993,0,-200.238	0/1:49:20,29:20:720:29:1032:-78.443,0,-50.3783	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.428	0/1:171:85,85:85:3060:85:3031:-221.457,0,-224.093	0/1:142:70,72:70:2520:72:2575:-189.253,0,-184.305	0/0:12:12,0:12:417:0:0:0,-3.61236,-37.8602	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/0:71:70,1:70:2501:1:36:0,-17.7749,-221.742	0/0:78:77,1:77:2753:1:36:0,-19.8821,-244.412	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/0:88:88,0:88:3129:0:0:0,-26.4906,-281.836	0/1:59:36,23:36:1296:23:809:-55.3675,0,-99.1832	0/1:78:30,48:30:1080:48:1711:-130.795,0,-74.0329	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/0:73:73,0:73:2601:0:0:0,-21.9752,-234.337	0/0:102:102,0:102:3668:0:0:0,-30.7051,-330.322	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.453	0/0:54:50,4:50:1792:4:144:0,-2.942,-148.249	0/1:76:34,42:34:1224:42:1491:-111.606,0,-87.5438	0/0:51:51,0:51:1824:0:0:0,-15.3525,-164.441	0/0:87:87,0:87:3124:0:0:0,-26.1896,-281.386	0/0:144:144,0:144:5176:0:0:0,-43.3483,-465.949	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/1:90:42,48:42:1508:48:1724:-128.353,0,-108.922	0/1:70:24,46:24:864:46:1638:-126.634,0,-57.0105	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:68:68,0:68:2431:0:0:0,-20.47,-219.045	0/1:85:53,32:53:1888:32:1143:-77.5911,0,-144.611	0/1:93:21,72:21:756:72:2575:-204.002,0,-40.3714	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:48:48,0:48:1713:0:0:0,-14.4494,-154.454
chr04	27555543	.	G	T	199774	PASS	AB=0.528897;ABP=36.1414;AC=147;AF=0.781915;AN=188;AO=9274;CIGAR=1X;DP=11441;DPB=11441;DPRA=0;EPP=19898.8;EPPR=4630.68;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.922;MQMR=59.9482;NS=94;NUMALT=1;ODDS=0.593756;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=329478;QR=77264;RO=2163;RPL=9246;RPP=19898.8;RPPR=4630.68;RPR=28;RUN=1;SAF=9274;SAP=20141.2;SAR=0;SRF=2163;SRP=4699.91;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:17:9,8:9:324:8:288:-20.5152,0,-24.3883	1/1:79:1,78:1:36:78:2770:-245.935,-20.1831,0	1/1:111:0,111:0:0:111:3960:-356.584,-33.4143,0	1/1:264:0,264:0:0:264:9352:-841.48,-79.4719,0	0/1:57:22,35:22:788:35:1260:-96.5468,0,-54.0861	0/1:57:27,30:27:964:30:1057:-78.2819,0,-69.9181	0/1:188:68,120:68:2436:120:4280:-328.612,0,-162.899	0/1:205:95,110:95:3396:110:3879:-287.592,0,-244.144	1/1:121:0,121:0:0:121:4291:-386.355,-36.4246,0	1/1:95:0,95:0:0:95:3412:-307.292,-28.5979,0	0/1:78:39,39:39:1404:39:1379:-100.928,0,-103.179	1/1:86:0,86:0:0:86:3060:-275.628,-25.8886,0	1/1:117:0,117:0:0:117:4168:-375.303,-35.2205,0	1/1:108:0,108:0:0:108:3847:-346.427,-32.5112,0	1/1:89:0,89:0:0:89:3170:-285.524,-26.7917,0	0/1:67:33,34:33:1173:34:1193:-87.5042,0,-85.7065	1/1:88:0,88:0:0:88:3107:-279.856,-26.4906,0	1/1:110:0,110:0:0:110:3951:-355.78,-33.1133,0	0/1:48:28,20:28:977:20:703:-49.1441,0,-73.7909	0/1:228:63,165:63:2256:165:5816:-454.924,0,-134.668	0/1:176:80,96:80:2864:96:3405:-253.682,0,-205.016	1/1:128:0,128:0:0:128:4555:-410.116,-38.5318,0	0/1:63:32,31:32:1144:31:1096:-79.9808,0,-84.3046	0/1:51:26,25:26:928:25:900:-65.9685,0,-68.4857	1/1:69:0,69:0:0:69:2441:-219.942,-20.7711,0	0/1:362:167,195:167:5962:195:6933:-515.066,0,-427.659	0/1:189:89,100:89:3192:100:3576:-265.149,0,-230.608	0/1:54:17,37:17:608:37:1324:-103.206,0,-38.7964	1/1:430:1,429:1:36:429:15268:-1370.24,-125.845,0	0/1:158:83,75:83:2984:75:2638:-190.08,0,-221.229	0/1:122:54,68:54:1928:68:2407:-179.931,0,-137.071	0/1:16:4,12:4:144:12:432:-34.4047,0,-8.49714	0/1:25:21,4:21:756:4:144:-5.78787,0,-60.8415	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:245:1,244:1:36:244:8614:-771.655,-70.1541,0	1/1:265:3,262:3:108:262:9350:-831.374,-69.6978,0	1/1:84:0,84:0:0:84:2926:-263.574,-25.2865,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:154:75,79:75:2671:79:2828:-208.4,0,-194.277	0/1:59:31,28:31:1094:28:1000:-72.5546,0,-81.0075	0/1:179:92,87:92:3296:87:3081:-223.634,0,-242.785	0/1:88:51,37:51:1836:37:1308:-91.529,0,-139.03	1/1:68:0,68:0:0:68:2389:-215.255,-20.47,0	1/1:160:0,160:0:0:160:5726:-515.457,-48.1648,0	1/1:190:0,190:0:0:190:6751:-607.67,-57.1957,0	0/1:181:92,89:92:3292:89:3118:-226.33,0,-242.013	0/1:107:54,53:54:1944:53:1900:-139.068,0,-143.025	1/1:211:0,211:0:0:211:7524:-677.199,-63.5173,0	1/1:183:0,183:0:0:183:6540:-588.684,-55.0885,0	1/1:17:0,17:0:0:17:612:-55.4111,-5.11751,0	1/1:149:0,149:0:0:149:5336:-480.371,-44.8535,0	0/1:67:30,37:30:1058:37:1299:-97.0392,0,-75.36	1/1:43:0,43:0:0:43:1528:-137.813,-12.9443,0	0/1:148:51,97:51:1819:97:3432:-264.542,0,-119.438	0/1:45:18,27:18:648:27:960:-73.1676,0,-45.1055	0/1:16:8,8:8:284:8:284:-21.0869,0,-21.0869	0/1:55:22,33:22:779:33:1168:-88.8706,0,-53.8754	0/1:76:47,29:47:1680:29:1044:-71.3965,0,-128.609	1/1:169:1,168:1:32:168:5954:-532.752,-47.6748,0	1/1:13:0,13:0:0:13:449:-40.7375,-3.91339,0	0/1:233:101,132:101:3620:132:4705:-353.47,0,-255.861	0/1:230:109,121:109:3872:121:4273:-315.512,0,-279.438	1/1:87:0,87:0:0:87:3052:-274.906,-26.1896,0	1/1:130:0,130:0:0:130:4555:-410.122,-39.1339,0	1/1:233:2,229:2:72:229:8087:-720.858,-63.061,0	1/1:123:1,122:1:36:122:4352:-388.256,-33.4284,0	1/1:30:0,30:0:0:30:1053:-95.0786,-9.0309,0	1/1:90:0,90:0:0:90:3216:-289.663,-27.0927,0	1/1:109:1,107:1:36:107:3781:-336.759,-29.4094,0	0/1:24:13,11:13:464:11:388:-28.0326,0,-34.8728	0/1:134:73,61:73:2612:61:2163:-154.599,0,-194.789	1/1:70:0,70:0:0:70:2494:-224.713,-21.0721,0	1/1:191:0,191:0:0:191:6828:-614.564,-57.4967,0	1/1:281:0,281:0:0:281:10047:-904.161,-84.5894,0	1/1:143:0,143:0:0:143:5066:-456.066,-43.0473,0	1/1:130:0,130:0:0:130:4622:-416.146,-39.1339,0	0/1:19:5,14:5:180:14:504:-39.9785,0,-10.8325	1/1:176:0,176:0:0:176:6251:-562.687,-52.9813,0	1/1:182:0,182:0:0:182:6445:-580.142,-54.7875,0	1/1:322:0,321:0:0:321:11443:-1028.71,-96.6306,0	1/1:137:0,137:0:0:137:4829:-434.766,-41.2411,0	1/1:89:0,89:0:0:89:3162:-284.805,-26.7917,0	0/1:120:69,51:69:2476:51:1788:-125.076,0,-186.97	0/1:220:110,110:110:3921:110:3934:-287.98,0,-286.856	1/1:58:0,58:0:0:58:2065:-186.119,-17.4597,0	1/1:112:0,112:0:0:112:3970:-357.478,-33.7154,0	1/1:95:0,95:0:0:95:3362:-302.796,-28.5979,0	1/1:77:0,77:0:0:77:2764:-249.001,-23.1793,0	0/1:170:89,81:89:3143:81:2892:-209.306,0,-231.92	0/1:77:52,25:52:1847:25:900:-58.1417,0,-143.33	1/1:161:0,161:0:0:161:5699:-512.947,-48.4658,0	1/1:129:0,129:0:0:129:4597:-413.763,-38.8329,0
chr04	27555558	.	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chr04	27555563	.	A	G	34381.6	PASS	AB=0.471221;ABP=35.756;AC=41;AF=0.218085;AN=188;AO=2153;CIGAR=1X;DP=11360;DPB=11360;DPRA=0.950452;EPP=4678.19;EPPR=19991.4;GTI=0;LEN=1;MEANALT=1.02174;MQM=59.967;MQMR=59.932;NS=94;NUMALT=1;ODDS=0.350868;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75962;QR=327606;RO=9205;RPL=2153;RPP=4678.19;RPPR=19991.4;RPR=0;RUN=1;SAF=2153;SAP=4678.19;SAR=0;SRF=9205;SRP=19991.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:18:8,10:8:288:10:343:-25.782,0,-20.2142	0/0:77:76,1:76:2701:1:36:0,-19.581,-239.724	0/0:109:109,0:109:3892:0:0:0,-32.8123,-350.467	0/0:267:267,0:267:9475:0:0:0,-80.375,-852.633	0/1:58:36,22:36:1283:22:783:-53.3332,0,-98.3129	0/1:53:28,25:28:996:25:896:-65.0058,0,-74.0003	0/1:191:121,70:121:4274:70:2449:-163.161,0,-327.343	0/1:201:107,94:107:3810:94:3305:-237.165,0,-282.583	0/0:114:114,0:114:4076:0:0:0,-34.3174,-367.011	0/0:93:93,0:93:3328:0:0:0,-27.9958,-299.733	0/1:83:43,40:43:1511:40:1405:-101.76,0,-111.295	0/0:92:92,0:92:3278:0:0:0,-27.6948,-295.238	0/0:118:118,0:118:4147:0:0:0,-35.5215,-373.418	0/0:109:109,0:109:3852:0:0:0,-32.8123,-346.878	0/0:88:88,0:88:3148:0:0:0,-26.4906,-283.546	0/1:72:38,34:38:1343:34:1192:-85.911,0,-99.4952	0/0:87:87,0:87:3071:0:0:0,-26.1896,-276.61	0/0:106:106,0:106:3756:0:0:0,-31.9092,-338.241	0/1:47:20,27:20:716:27:951:-71.7551,0,-50.6193	0/1:222:158,64:158:5632:64:2287:-139.262,0,-440.173	0/1:173:95,78:95:3404:78:2731:-193.953,0,-254.492	0/0:125:125,0:125:4469:0:0:0,-37.6287,-402.378	0/1:64:31,33:31:1104:33:1171:-86.4308,0,-80.4047	0/1:50:23,27:23:824:27:951:-70.8528,0,-59.4318	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/1:358:191,167:191:6812:167:5952:-428.015,0,-505.382	0/1:191:103,88:103:3674:88:3129:-224.339,0,-273.366	0/1:54:37,17:37:1310:17:582:-36.4432,0,-101.944	0/0:419:419,0:419:14914:0:0:0,-126.132,-1342	0/1:160:80,80:80:2846:80:2834:-207.134,0,-208.163	0/1:125:70,55:70:2471:55:1970:-139.944,0,-185.007	0/1:15:11,4:11:396:4:144:-8.79817,0,-31.4673	0/1:24:5,19:5:180:19:675:-53.8522,0,-9.32734	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:5:2,3:2:68:3:104:-8.19766,0,-4.95256	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:238:238,0:238:8468:0:0:0,-71.6451,-762.098	0/0:258:255,3:255:9063:3:108:0,-67.5906,-805.571	0/0:86:86,0:86:3059:0:0:0,-25.8886,-275.532	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:144:73,71:73:2607:71:2496:-181.544,0,-191.529	0/1:60:30,30:30:1072:30:1038:-75.6658,0,-78.7307	0/1:173:84,89:84:2990:89:3184:-234.706,0,-217.245	0/1:87:36,51:36:1275:51:1792:-135.37,0,-88.8627	0/0:76:76,0:76:2647:0:0:0,-22.8783,-238.441	0/0:151:151,0:151:5366:0:0:0,-45.4555,-483.073	0/0:187:187,0:187:6670:0:0:0,-56.2926,-600.379	0/1:178:90,88:90:3194:88:3098:-225.461,0,-234.068	0/1:109:54,55:54:1912:55:1944:-142.421,0,-139.545	0/0:205:205,0:205:7302:0:0:0,-61.7111,-657.231	0/0:178:178,0:178:6388:0:0:0,-53.5833,-575.007	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:143:143,0:143:5097:0:0:0,-43.0473,-458.874	0/1:63:36,27:36:1284:27:936:-65.5854,0,-96.8809	0/0:46:46,0:46:1624:0:0:0,-13.8474,-146.449	0/1:147:96,51:96:3417:51:1819:-119.739,0,-263.491	0/1:46:27,18:27:963:18:648:-44.8308,0,-73.1662	0/1:16:8,8:8:284:8:269:-19.7196,0,-21.0869	0/1:54:31,23:31:1108:23:815:-57.4151,0,-83.7754	0/1:79:29,50:29:1040:50:1764:-135.259,0,-70.133	0/0:170:169,1:169:5978:1:36:0,-47.5768,-534.484	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/1:232:131,101:131:4704:101:3588:-253.276,0,-353.679	0/1:235:122,113:122:4342:113:3980:-287.65,0,-320.211	0/0:87:87,0:87:3090:0:0:0,-26.1896,-278.328	0/0:137:137,0:137:4873:0:0:0,-41.2411,-438.665	0/0:232:230,2:230:8217:2:72:0,-63.0022,-732.544	0/0:126:125,1:125:4438:1:36:0,-34.3315,-395.993	0/0:35:35,0:35:1238:0:0:0,-10.536,-111.723	0/0:91:91,0:91:3252:0:0:0,-27.3937,-292.902	0/0:103:103,0:103:3647:0:0:0,-31.0061,-328.165	0/1:26:13,13:13:468:13:460:-33.9086,0,-34.6329	0/1:132:60,72:60:2148:72:2516:-186.949,0,-153.852	0/0:69:69,0:69:2452:0:0:0,-20.7711,-220.936	0/0:191:191,0:191:6812:0:0:0,-57.4967,-613.109	0/0:277:277,0:277:9900:0:0:0,-83.3853,-890.944	0/0:132:132,0:132:4698:0:0:0,-39.736,-422.966	0/0:127:127,0:127:4531:0:0:0,-38.2308,-407.958	0/1:19:14,5:14:500:5:180:-10.8325,0,-39.6166	0/0:171:171,0:171:6097:0:0:0,-51.4761,-548.832	0/0:184:184,0:184:6582:0:0:0,-55.3895,-592.459	0/0:325:324,0:324:11506:0:0:0,-97.5337,-1035.17	0/0:136:136,0:136:4837:0:0:0,-40.9401,-435.486	0/0:86:86,0:86:3076:0:0:0,-25.8886,-277.069	0/1:123:51,72:51:1816:72:2517:-189.753,0,-126.695	0/1:218:109,109:109:3810:109:3826:-278.916,0,-277.475	0/0:60:60,0:60:2131:0:0:0,-18.0618,-192.04	0/0:112:112,0:112:3982:0:0:0,-33.7154,-358.382	0/0:95:95,0:95:3404:0:0:0,-28.5978,-306.564	0/0:74:74,0:74:2648:0:0:0,-22.2762,-238.567	0/1:172:81,91:81:2875:91:3191:-235.636,0,-207.175	0/1:75:24,51:24:846:51:1759:-136.011,0,-53.8805	0/0:167:167,0:167:5950:0:0:0,-50.272,-535.598	0/0:127:127,0:127:4511:0:0:0,-38.2308,-406.141
chr04	27693371	.	TAAAGTA	TGAGTG,TAAGTG	203637	PASS	AB=0.51269,0.483156;ABP=9.07279,13.6903;AC=146,42;AF=0.776596,0.223404;AN=188;AO=7519,2107;CIGAR=1M1D1X3M1X,1M1D4M1X;DP=9659;DPB=8280.57;DPRA=0,1.30711;EPP=16330.3,4569.62;EPPR=0;GTI=0;LEN=6,6;MEANALT=1.89362,2.42308;MQM=59.3572,59.317;MQMR=0;NS=94;NUMALT=2;ODDS=5.93744;PAIRED=0,0;PAIREDR=0;PAO=4,4;PQA=138,138;PQR=0;PRO=0;QA=264441,73961;QR=0;RO=0;RPL=0,1;RPP=16330.3,4569.62;RPPR=0;RPR=7519,2106;RUN=1,1;SAF=0,0;SAP=16330.3,4578.3;SAR=7519,2107;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:33:0,23,10:0:0:23,10:809,360:-95.5708,-29.7306,-22.8069,-66.1974,0,-63.1871	1/1:137:0,137,0:0:0:137,0:4835,0:-435.133,-41.2411,0,-435.133,-41.2411,-435.133	1/1:125:0,125,0:0:0:125,0:4391,0:-394.988,-37.6288,0,-394.988,-37.6288,-394.988	1/1:260:0,259,1:0:0:259,1:9089,36:-817.552,-77.9668,0,-814.615,-74.6695,-814.314	1/2:101:0,56,45:0:0:56,45:1979,1566:-288.653,-127.514,-110.657,-161.488,0,-147.942	1/2:49:0,37,12:0:0:37,12:1267,404:-135.8,-33.0584,-21.9203,-103.079,0,-99.4671	1/2:132:0,72,58:0:0:72,58:2500,2059:-370.787,-167.766,-146.092,-203.018,0,-185.559	1/2:144:0,81,63:0:0:81,63:2848,2193:-410.328,-178.58,-154.197,-232.097,0,-213.132	1/1:104:0,103,1:0:0:103,1:3640,36:-327.222,-31.0061,0,-324.284,-27.7088,-323.983	1/1:69:0,69,0:0:0:69,0:2437,0:-219.48,-20.7711,0,-219.48,-20.7711,-219.48	1/2:58:0,29,29:0:0:29,29:1012,1036:-167.08,-84.8125,-76.0826,-82.6207,0,-73.8909	1/1:76:0,76,0:0:0:76,0:2652,0:-238.863,-22.8783,0,-238.863,-22.8783,-238.863	1/1:46:0,46,0:0:0:46,0:1624,0:-146.314,-13.8474,0,-146.314,-13.8474,-146.314	1/1:98:0,97,0:0:0:97,0:3434,0:-308.87,-29.1999,0,-308.87,-29.1999,-308.87	1/1:67:0,67,0:0:0:67,0:2382,0:-214.636,-20.169,0,-214.636,-20.169,-214.636	1/2:68:0,35,33:0:0:35,33:1244,1172:-197.075,-95.7576,-85.2216,-101.672,0,-91.738	1/1:73:0,73,0:0:0:73,0:2587,0:-233.079,-21.9752,0,-233.079,-21.9752,-233.079	1/1:25:0,25,0:0:0:25,0:884,0:-79.8593,-7.52575,0,-79.8593,-7.52575,-79.8593	1/2:41:0,9,31:0:0:9,31:313,1099:-114.931,-89.5281,-86.8188,-25.3972,0,-16.0653	1/2:207:0,108,98:0:0:108,98:3787,3443:-588.378,-280.248,-247.736,-308.178,0,-278.677	1/2:128:0,48,78:0:0:48,78:1685,2765:-362.286,-225.307,-210.857,-137.058,0,-113.577	1/1:182:0,180,1:0:0:180,1:6293,36:-565.424,-54.1854,0,-562.486,-51.2781,-562.185	1/2:142:0,79,63:0:0:79,63:2738,2211:-402.694,-180.195,-156.413,-222.848,0,-203.883	1/2:178:0,74,103:0:0:74,103:2620,3637:-509.526,-296.107,-273.83,-213.413,0,-182.407	1/1:86:0,86,0:0:0:86,0:3026,0:-272.497,-25.8886,0,-272.497,-25.8886,-272.497	1/2:252:0,117,135:0:0:117,135:4064,4748:-716.337,-386.757,-351.536,-329.929,0,-289.29	1/2:195:0,108,87:0:0:108,87:3780,3035:-554.141,-247.115,-214.604,-307.375,0,-281.186	1/2:33:0,19,14:0:0:19,14:657,496:-94.0931,-40.7127,-34.9931,-53.7307,0,-49.5163	1/1:229:0,227,1:0:0:227,1:7984,27:-718.207,-68.3338,0,-716.079,-66.22,-715.778	1/2:170:0,89,80:0:0:89,80:3120,2819:-483.082,-229.38,-202.589,-253.624,0,-229.541	1/2:131:0,70,60:0:0:70,60:2451,2120:-372.043,-172.694,-151.622,-199.478,0,-181.416	1/2:11:0,4,7:0:0:4,7:144,252:-32.6428,-20.9217,-19.7176,-12.0804,0,-9.97318	1/2:13:0,6,7:0:0:6,7:216,248:-38.1841,-20.557,-18.7508,-17.9843,0,-15.8771	1/1:6:0,6,0:0:0:6,0:213,0:-19.4798,-1.80618,0,-19.4798,-1.80618,-19.4798	1/2:18:0,9,9:0:0:9,9:312,320:-51.7882,-26.4331,-23.7238,-25.7061,0,-22.9968	1/1:12:0,12,0:0:0:12,0:424,0:-38.4964,-3.61236,0,-38.4964,-3.61236,-38.4964	1/1:169:0,166,0:0:0:166,0:5836,0:-524.924,-49.971,0,-524.924,-49.971,-524.924	1/2:236:0,137,99:0:0:137,99:4785,3481:-672.395,-283.484,-242.243,-389.202,0,-359.4	1/1:65:0,65,0:0:0:65,0:2285,0:-205.726,-19.567,0,-205.726,-19.567,-205.726	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:145:0,143,1:0:0:143,1:5069,36:-455.867,-43.0473,0,-452.93,-40.0649,-452.629	1/2:28:0,10,18:0:0:10,18:357,644:-81.9272,-52.8224,-49.8121,-29.4618,0,-24.0432	1/2:164:0,85,79:0:0:85,79:2978,2749:-466.013,-223.738,-198.151,-242.565,0,-218.783	1/2:82:0,39,43:0:0:39,43:1373,1507:-234.701,-122.924,-111.184,-112.128,0,-99.1836	1/1:57:0,57,0:0:0:57,0:2010,0:-181.077,-17.1587,0,-181.077,-17.1587,-181.077	1/1:100:0,100,0:0:0:100,0:3515,0:-316.251,-30.103,0,-316.251,-30.103,-316.251	1/1:140:0,140,0:0:0:140,0:4917,0:-442.518,-42.1442,0,-442.518,-42.1442,-442.518	1/2:168:0,108,59:0:0:108,59:3759,2064:-473.389,-167.832,-135.321,-305.487,0,-287.726	1/2:150:0,57,92:0:0:57,92:2028,3204:-425.826,-260.568,-243.41,-165.338,0,-137.643	1/1:182:0,179,0:0:0:179,0:6327,0:-569.024,-53.8844,0,-569.024,-53.8844,-569.024	1/1:152:0,151,1:0:0:151,1:5305,36:-477.116,-45.4555,0,-474.179,-42.1583,-473.878	1/2:17:0,12,5:0:0:12,5:429,174:-49.4773,-14.4915,-10.8791,-35.3363,0,-33.8312	1/1:138:0,137,1:0:0:137,1:4852,36:-436.308,-41.2411,0,-433.415,-37.9936,-433.114	1/2:45:0,23,22:0:0:23,22:806,783:-129.698,-64.1529,-57.2292,-65.8984,0,-59.2757	1/1:25:0,25,0:0:0:25,0:879,0:-79.4274,-7.52575,0,-79.4274,-7.52575,-79.4274	1/1:166:0,166,0:0:0:166,0:5811,0:-522.577,-49.971,0,-522.577,-49.971,-522.577	1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chr04	27693402	.	C	T	37572.1	PASS	AB=0.501362;ABP=3.0813;AC=42;AF=0.223404;AN=188;AO=2221;CIGAR=1X;DP=9658;DPB=9658;DPRA=1.36364;EPP=4791.17;EPPR=15494.4;GTI=0;LEN=1;MEANALT=1.05882;MQM=59.1022;MQMR=59.4087;NS=94;NUMALT=1;ODDS=4.50026;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79475;QR=265370;RO=7431;RPL=2217;RPP=4791.17;RPPR=15494.4;RPR=4;RUN=1;SAF=0;SAP=4825.85;SAR=2221;SRF=0;SRP=16139.2;SRR=7431;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:35:23,12:23:824:12:432:-28.6818,0,-63.9023	0/0:138:138,0:138:4935:0:0:0,-41.5421,-444.12	0/0:123:123,0:123:4412:0:0:0,-37.0267,-396.795	0/0:252:250,1:250:8939:1:36:0,-72.3191,-800.788	0/1:104:56,48:56:2008:48:1709:-122.588,0,-149.683	0/1:49:37,12:37:1320:12:432:-24.4255,0,-104.236	0/1:132:71,61:71:2531:61:2184:-157.054,0,-187.798	0/1:151:84,67:84:2966:67:2408:-171.351,0,-221.627	0/0:108:107,1:107:3823:1:36:0,-28.913,-340.493	0/0:71:71,0:71:2539:0:0:0,-21.3731,-228.616	0/1:57:28,29:28:1000:29:1044:-77.0976,0,-73.1319	0/0:76:76,0:76:2720:0:0:0,-22.8783,-244.943	0/0:46:46,0:46:1644:0:0:0,-13.8474,-148.114	0/0:93:93,0:93:3336:0:0:0,-27.9958,-300.216	0/0:65:65,0:65:2321:0:0:0,-19.5669,-209.144	0/1:70:35,35:35:1256:35:1241:-90.8487,0,-92.2164	0/0:75:75,0:75:2671:0:0:0,-22.5772,-240.634	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.2097	0/1:41:8,33:8:288:33:1184:-94.421,0,-13.8798	0/1:203:106,97:106:3782:97:3484:-252.598,0,-279.336	0/1:135:50,85:50:1792:85:3048:-233.804,0,-120.76	0/0:179:179,0:179:6376:0:0:0,-53.8844,-573.518	0/1:141:74,67:74:2643:67:2408:-174.362,0,-195.636	0/1:180:76,104:76:2724:104:3732:-281.828,0,-191.216	0/0:86:86,0:86:3064:0:0:0,-25.8886,-275.912	0/1:257:113,144:113:4026:144:5172:-388.193,0,-283.949	0/1:197:104,93:104:3720:93:3325:-239.988,0,-275.128	0/1:34:19,15:19:680:15:531:-37.8331,0,-51.2908	0/0:222:221,1:221:7900:1:36:0,-63.2304,-707.303	0/1:171:89,82:89:3167:82:2944:-213.664,0,-233.562	0/1:136:67,69:67:2386:69:2453:-179.917,0,-173.994	0/1:11:4,7:4:135:7:252:-19.7176,0,-9.16739	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.406	0/1:20:9,11:9:320:11:396:-29.9621,0,-23.1218	0/0:13:13,0:13:455:0:0:0,-3.91339,-41.2585	0/0:167:167,0:167:5959:0:0:0,-50.272,-536.309	0/1:240:135,104:135:4806:104:3727:-263.136,0,-360.048	0/0:66:66,0:66:2364:0:0:0,-19.868,-212.839	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:143:142,1:142:5067:1:36:0,-39.449,-452.373	0/1:28:10,18:10:360:18:648:-50.1734,0,-24.3155	0/1:166:83,83:83:2955:83:2964:-216.815,0,-216.168	0/1:83:37,46:37:1324:46:1656:-124.286,0,-94.4757	0/0:57:57,0:57:2027:0:0:0,-17.1587,-182.575	0/0:98:98,0:98:3485:0:0:0,-29.5009,-313.787	0/0:138:138,0:138:4921:0:0:0,-41.5421,-442.829	0/1:168:104,64:104:3685:64:2282:-154.963,0,-281.2	0/1:155:60,95:60:2156:95:3382:-257.859,0,-147.609	0/0:175:174,0:174:6235:0:0:0,-52.3792,-560.632	0/0:150:149,1:149:5333:1:36:0,-41.5562,-476.385	0/1:17:12,5:12:428:5:176:-11.0496,0,-33.7404	0/0:137:136,1:136:4880:1:36:0,-37.6926,-435.618	0/1:44:22,22:22:784:22:777:-56.9889,0,-57.592	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:165:165,0:165:5895:0:0:0,-49.6699,-529.981	0/1:66:30,36:30:1068:36:1296:-97.0352,0,-76.5465	0/1:17:11,6:11:396:6:216:-14.673,0,-30.8652	0/1:25:20,5:20:716:5:180:-9.02631,0,-57.2256	0/1:93:73,20:73:2612:20:716:-36.7245,0,-207.259	0/0:112:112,0:112:4020:0:0:0,-33.7154,-361.85	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:222:106,116:106:3771:116:4114:-303.58,0,-272.735	0/1:271:133,136:133:4750:136:4880:-357.914,0,-346.258	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.644	0/0:85:85,0:85:3028:0:0:0,-25.5875,-272.281	0/0:232:227,5:227:8057:5:176:0,-53.6565,-708.854	0/0:149:149,0:149:5339:0:0:0,-44.8535,-480.534	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.195	0/0:94:94,0:94:3352:0:0:0,-28.2968,-301.853	0/0:61:61,0:61:2180:0:0:0,-18.3628,-196.45	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	0/1:94:34,60:34:1224:60:2127:-162.798,0,-82.1702	0/0:96:96,0:96:3440:0:0:0,-28.8989,-309.677	0/0:168:168,0:168:5972:0:0:0,-50.573,-537.488	0/0:169:168,0:168:6024:0:0:0,-50.573,-541.713	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.16	0/0:51:51,0:51:1819:0:0:0,-15.3525,-163.811	0/1:15:9,6:9:320:6:216:-15.2294,0,-24.6269	0/0:136:136,0:136:4834:0:0:0,-40.9401,-435.109	0/1:161:74,87:74:2652:87:3081:-228.632,0,-190.286	0/0:193:192,1:192:6854:1:36:0,-54.52,-613.229	0/0:106:106,0:106:3783:0:0:0,-31.9092,-340.63	0/0:61:61,0:61:2171:0:0:0,-18.3628,-195.656	0/1:82:40,42:40:1427:42:1512:-111.652,0,-104.025	0/1:129:54,75:54:1936:75:2690:-203.466,0,-135.666	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3519	0/0:69:69,0:69:2460:0:0:0,-20.7711,-221.042	0/0:70:70,0:70:2500:0:0:0,-21.0721,-225.159	0/0:51:51,0:51:1824:0:0:0,-15.3525,-164.424	0/1:111:57,54:57:2031:54:1940:-140.976,0,-149.245	0/1:65:21,44:21:752:44:1584:-123.18,0,-48.4207	0/0:127:126,1:126:4512:1:36:0,-34.6325,-402.56	0/0:99:99,0:99:3543:0:0:0,-29.802,-319.024
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chr04	28045651	.	A	T	20713.8	PASS	AB=0.430636;ABP=176.527;AC=43;AF=0.228723;AN=188;AO=1804;CIGAR=1X;DP=9971;DPB=9971;DPRA=1.03676;EPP=3920.35;EPPR=17711.4;GTI=1;LEN=1;MEANALT=1.01961;MQM=32.9446;MQMR=47.1623;NS=94;NUMALT=1;ODDS=0.921029;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=64675;QR=291340;RO=8163;RPL=5;RPP=3877.04;RPPR=8795.04;RPR=1799;RUN=1;SAF=5;SAP=3877.04;SAR=1799;SRF=1205;SRP=8807.28;SRR=6958;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:19,13:19:684:13:464:-26.8878,0,-50.7487	0/0:113:113,0:113:4047:0:0:0,-34.0164,-358.877	0/0:193:193,0:193:6860:0:0:0,-58.0988,-607.996	0/0:211:210,1:210:7509:1:32:0,-60.5711,-659.488	0/1:80:36,44:36:1296:44:1580:-100.512,0,-90.3965	0/1:57:30,27:30:1080:27:972:-60.6722,0,-79.1327	0/1:94:41,53:41:1460:53:1908:-121.637,0,-101.281	0/1:119:51,68:51:1806:68:2436:-155.935,0,-125.393	0/0:71:69,2:69:2448:2:72:0,-15.3166,-211.151	0/0:47:47,0:47:1633:0:0:0,-14.1484,-143.826	0/1:79:35,44:35:1260:44:1580:-99.2761,0,-88.0103	0/0:88:88,0:88:3143:0:0:0,-26.4906,-279.516	0/0:69:69,0:69:2459:0:0:0,-20.7711,-218.908	0/0:52:52,0:52:1868:0:0:0,-15.6536,-165.221	0/0:75:75,0:75:2663:0:0:0,-22.5772,-235.428	0/1:54:29,25:29:1028:25:900:-54.334,0,-74.9117	0/1:36:19,17:19:676:17:608:-37.304,0,-49.706	0/0:33:33,0:33:1184:0:0:0,-9.93399,-105.708	0/1:42:26,16:26:924:16:572:-34.2694,0,-69.4687	0/1:206:111,95:111:3979:95:3393:-202.126,0,-290.831	0/1:164:82,82:82:2927:82:2936:-180.523,0,-210.85	0/0:130:130,0:130:4646:0:0:0,-39.1339,-412.801	0/1:154:74,80:74:2630:80:2868:-176.545,0,-186.021	0/1:69:28,41:28:1008:41:1463:-93.659,0,-69.1806	0/0:98:98,0:98:3490:0:0:0,-29.5009,-310.596	0/1:370:281,89:281:10057:89:3192:-134.39,0,-786.947	0/1:228:106,122:106:3778:122:4369:-270.911,0,-267.429	0/1:27:15,12:15:540:12:428:-25.6743,0,-39.5102	0/0:476:476,0:476:17004:0:0:0,-143.29,-1515.21	0/1:139:110,29:110:3920:29:1040:-38.7892,0,-306.276	0/1:131:82,49:82:2923:49:1749:-97.6204,0,-219.536	0/1:12:6,6:6:216:6:216:-13.5676,0,-15.96	0/1:23:10,13:10:351:13:468:-28.9097,0,-24.1941	0/0:14:14,0:14:504:0:0:0,-4.21442,-44.996	0/1:16:5,11:5:180:11:396:-27.0598,0,-11.4574	0/0:41:41,0:41:1464:0:0:0,-12.3422,-129.893	0/0:446:446,0:446:15887:0:0:0,-134.259,-1419.46	0/1:71:35,36:35:1243:36:1296:-79.6929,0,-88.5942	0/0:52:52,0:52:1860:0:0:0,-15.6536,-165.889	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.3696	0/0:136:134,2:134:4746:2:72:0,-35.0052,-416.072	0/1:25:18,7:18:631:7:252:-12.4655,0,-48.8963	0/1:170:82,88:82:2940:88:3160:-193.888,0,-210.447	0/1:86:47,39:47:1684:39:1404:-84.7237,0,-122.743	0/0:56:56,0:56:1991:0:0:0,-16.8577,-176.09	0/0:227:227,0:227:8111:0:0:0,-68.3338,-721.835	0/0:127:127,0:127:4514:0:0:0,-38.2308,-400.759	0/1:94:49,45:49:1760:45:1589:-93.5561,0,-127.82	0/1:53:19,34:19:684:34:1217:-78.3881,0,-44.6134	0/0:102:102,0:102:3660:0:0:0,-30.7051,-322.547	0/1:229:177,52:177:6323:52:1868:-75.4853,0,-496.47	0/1:19:12,7:12:432:7:252:-14.0698,0,-32.9684	0/0:149:148,1:148:5304:1:36:0,-42.2948,-468.257	0/1:128:97,31:97:3492:31:1112:-48.8276,0,-273.632	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.3817	0/0:190:186,4:186:6646:4:144:0,-45.6382,-577.379	0/1:30:15,15:15:532:15:540:-33.4506,0,-38.162	0/0:34:34,0:34:1224:0:0:0,-10.235,-109.334	0/1:22:13,9:13:468:9:324:-18.3928,0,-35.4757	0/1:85:54,31:54:1924:31:1116:-61.9321,0,-144.62	0/0:98:97,1:97:3472:1:36:0,-26.3773,-304.474	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.0936	0/1:259:179,80:179:6369:80:2872:-145.798,0,-488.484	0/1:117:56,61:56:1987:61:2184:-136.221,0,-140.682	0/0:52:52,0:52:1853:0:0:0,-15.6536,-164.719	0/0:68:68,0:68:2419:0:0:0,-20.47,-211.09	0/0:184:182,2:182:6482:2:72:0,-49.2432,-567.736	0/0:308:305,3:305:10900:3:108:0,-83.971,-952.141	0/0:43:43,0:43:1548:0:0:0,-12.9443,-136.461	0/0:74:74,0:74:2647:0:0:0,-22.2762,-235.299	0/0:160:159,0:159:5642:0:0:0,-47.8638,-505.649	0/1:30:11,19:11:396:19:680:-44.0236,0,-26.443	0/1:112:71,41:71:2544:41:1472:-82.6124,0,-192.502	0/0:99:99,0:99:3529:0:0:0,-29.802,-313.302	0/0:225:225,0:225:8049:0:0:0,-67.7317,-710.902	0/0:156:156,0:156:5596:0:0:0,-46.9607,-494.39	0/0:105:105,0:105:3759:0:0:0,-31.6081,-334.301	0/0:103:103,0:103:3662:0:0:0,-31.0061,-323.904	0/1:20:5,15:5:180:15:540:-36.7609,0,-10.1992	0/0:116:116,0:116:4147:0:0:0,-34.9195,-368.635	0/1:119:67,52:67:2400:52:1872:-112.702,0,-176.642	0/0:178:178,0:178:6338:0:0:0,-53.5833,-558.729	0/0:41:41,0:41:1433:0:0:0,-12.3422,-127.064	0/0:69:68,0:68:2435:0:0:0,-20.47,-214.455	0/1:44:19,25:19:680:25:900:-55.8723,0,-47.5338	0/1:111:54,56:54:1926:56:2008:-122.032,0,-137.395	0/0:20:20,0:20:716:0:0:0,-6.0206,-63.7689	0/0:69:69,0:69:2464:0:0:0,-20.7711,-218.222	0/0:76:76,0:76:2720:0:0:0,-22.8783,-241.797	0/0:50:50,0:50:1778:0:0:0,-15.0515,-158.02	0/1:105:57,48:57:2030:48:1728:-101.835,0,-148.436	0/1:91:30,61:30:1068:61:2179:-141.361,0,-66.8081	0/0:179:178,0:178:6341:0:0:0,-53.5833,-559.262	0/0:87:87,0:87:3085:0:0:0,-26.1896,-271.974
chr04	28252006	.	A	G	65913.4	PASS	AB=0.478436;ABP=28.1091;AC=47;AF=0.25;AN=188;AO=2991;CIGAR=1X;DP=13489;DPB=13489;DPRA=0.997941;EPP=6497.88;EPPR=22781.8;GTI=1;LEN=1;MEANALT=1;MQM=59.987;MQMR=59.9964;NS=94;NUMALT=1;ODDS=11.8569;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105433;QR=375277;RO=10498;RPL=1582;RPP=24.7388;RPPR=83.0358;RPR=1409;RUN=1;SAF=1582;SAP=24.7388;SAR=1409;SRF=5560;SRP=83.0358;SRR=4938;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:52:23,29:23:828:29:1032:-77.5399,0,-59.1906	0/0:230:230,0:230:8227:0:0:0,-69.2369,-740.442	0/0:303:303,0:303:10819:0:0:0,-91.2121,-973.614	0/0:180:180,0:180:6439:0:0:0,-54.1854,-579.594	0/1:128:71,57:71:2544:57:2024:-143.898,0,-190.679	0/1:76:43,33:43:1544:33:1188:-84.3503,0,-116.375	0/1:126:64,62:64:2292:62:2170:-157.634,0,-168.612	0/1:208:107,101:107:3822:101:3565:-258.441,0,-281.562	0/0:170:170,0:170:6078:0:0:0,-51.1751,-547.122	0/0:124:124,0:124:4444:0:0:0,-37.3277,-400.13	0/1:165:82,83:82:2921:83:2883:-210.034,0,-213.454	0/1:160:89,71:89:3174:71:2492:-176.369,0,-237.719	0/0:183:183,0:183:6541:0:0:0,-55.0885,-588.772	0/0:188:188,0:188:6732:0:0:0,-56.5936,-605.954	0/0:152:151,1:151:5384:1:21:0,-43.6566,-482.591	0/1:132:68,64:68:2409:64:2254:-163.386,0,-177.329	0/1:151:77,74:77:2724:74:2584:-187.352,0,-199.947	0/0:181:181,0:181:6491:0:0:0,-54.4864,-584.273	0/1:124:61,63:61:2187:63:2189:-159.945,0,-159.767	0/1:232:114,118:114:4080:118:4206:-308.883,0,-297.547	0/1:228:106,122:106:3751:122:4315:-319.891,0,-269.156	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.307	0/1:95:47,48:47:1688:48:1697:-124.416,0,-123.609	0/1:175:97,78:97:3453:78:2723:-192.632,0,-258.279	0/0:106:106,0:106:3785:0:0:0,-31.9092,-340.848	0/1:331:177,154:177:6305:154:5461:-391.979,0,-467.904	0/1:281:143,138:143:5103:138:4893:-355.936,0,-374.825	0/1:67:33,34:33:1180:34:1207:-88.7659,0,-86.339	0/0:254:253,1:253:9053:1:36:0,-72.8633,-811.147	0/1:120:67,53:67:2391:53:1849:-130.564,0,-179.323	0/1:179:92,87:92:3280:87:3092:-224.622,0,-241.534	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/1:27:12,15:12:432:15:536:-40.447,0,-31.0934	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:17:11,6:11:388:6:216:-14.673,0,-30.1399	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/0:355:355,0:355:12693:0:0:0,-106.866,-1142.19	0/1:130:64,66:64:2285:66:2340:-171.724,0,-166.776	0/0:163:163,0:163:5810:0:0:0,-49.0679,-523.013	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:162:160,2:160:5731:2:72:0,-41.9301,-509.069	0/1:95:49,46:49:1749:46:1635:-118.84,0,-129.094	0/1:165:88,77:88:3148:77:2709:-194.378,0,-233.876	0/1:155:89,66:89:3189:66:2289:-159.61,0,-240.572	0/0:108:108,0:108:3871:0:0:0,-32.5112,-348.584	0/0:82:82,0:82:2933:0:0:0,-24.6845,-264.203	0/0:159:159,0:159:5700:0:0:0,-47.8638,-513.117	0/1:174:87,87:87:3113:87:3062:-223.43,0,-228.016	0/1:128:70,58:70:2488:58:2080:-148.934,0,-185.639	0/0:171:171,0:171:6104:0:0:0,-51.4761,-549.46	0/1:159:80,79:80:2880:79:2791:-203.566,0,-211.572	0/1:20:7,13:7:252:13:464:-36.0769,0,-17.0084	0/0:220:219,1:219:7800:1:36:0,-62.6283,-698.431	0/1:58:28,30:28:1000:30:1063:-78.5211,0,-72.8556	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:133:133,0:133:4730:0:0:0,-40.037,-425.859	0/1:36:19,17:19:676:17:612:-44.5764,0,-50.3309	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/1:29:19,10:19:684:10:352:-23.2883,0,-53.1605	0/1:155:82,73:82:2944:73:2577:-185.518,0,-218.534	0/0:211:209,2:209:7482:2:72:0,-56.6806,-666.585	0/1:18:16,2:16:576:2:68:-1.03917,0,-46.7564	0/1:116:66,50:66:2360:50:1770:-124.662,0,-177.739	0/1:249:118,131:118:4221:131:4655:-344.156,0,-305.112	0/0:130:130,0:130:4643:0:0:0,-39.1339,-418.033	0/0:74:74,0:74:2643:0:0:0,-22.2762,-238.116	0/0:151:148,3:148:5311:3:108:0,-35.3804,-468.047	0/0:161:158,3:158:5672:3:108:0,-38.3907,-500.522	0/0:101:101,0:101:3607:0:0:0,-30.404,-324.836	0/0:116:116,0:116:4148:0:0:0,-34.9195,-373.501	0/0:223:223,0:223:7974:0:0:0,-67.1297,-717.682	0/1:43:24,19:24:860:19:667:-47.4103,0,-64.7775	0/1:93:49,44:49:1752:44:1559:-112.605,0,-129.968	0/0:107:106,1:106:3779:1:36:0,-28.6119,-336.711	0/0:220:219,1:219:7855:1:36:0,-62.6283,-703.376	0/0:179:178,1:178:6372:1:36:0,-50.2861,-569.969	0/1:160:82,78:82:2948:78:2741:-198.766,0,-217.388	0/0:187:186,1:186:6683:1:36:0,-52.6943,-597.944	0/1:12:5,7:5:180:7:252:-19.4166,0,-12.9397	0/1:177:105,72:105:3764:72:2544:-175.925,0,-285.677	0/1:170:96,74:96:3409:74:2588:-181.993,0,-255.85	0/0:242:241,1:241:8621:1:36:0,-69.251,-772.286	0/0:220:220,0:220:7856:0:0:0,-66.2266,-707.065	0/0:174:174,0:174:6227:0:0:0,-52.3792,-560.525	0/1:174:100,74:100:3584:74:2586:-180.607,0,-270.387	0/1:269:147,122:147:5242:122:4260:-302.607,0,-390.941	0/0:85:85,0:85:3035:0:0:0,-25.5875,-273.38	0/0:140:140,0:140:4954:0:0:0,-42.1442,-446.009	0/0:157:157,0:157:5609:0:0:0,-47.2617,-504.931	0/0:218:218,0:218:7812:0:0:0,-65.6245,-703.108	0/1:208:107,101:107:3831:101:3521:-254.486,0,-282.302	0/1:136:54,82:54:1927:82:2859:-216.609,0,-132.766	0/0:106:106,0:106:3787:0:0:0,-31.9092,-341.029	0/0:285:285,0:285:10176:0:0:0,-85.7935,-915.771
chr04	28418420	.	C	T	53349.9	PASS	AB=0.469694;ABP=43.9433;AC=46;AF=0.244681;AN=188;AO=2445;CIGAR=1X;DP=10994;DPB=10994;DPRA=1.26635;EPP=5303.58;EPPR=18534.4;GTI=0;LEN=1;MEANALT=1.1194;MQM=59.8822;MQMR=59.9555;NS=94;NUMALT=1;ODDS=15.2646;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=86552;QR=300036;RO=8538;RPL=1127;RPP=35.4101;RPPR=51.802;RPR=1318;RUN=1;SAF=1126;SAP=36.0922;SAR=1319;SRF=4049;SRP=52.2487;SRR=4489;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:26,29:26:911:29:1021:-75.6329,0,-65.7483	0/0:97:97,0:97:3468:0:0:0,-29.1999,-312.315	0/0:182:180,2:180:6390:2:72:0,-47.9507,-568.345	0/0:234:233,1:233:8256:1:36:0,-66.8427,-739.459	0/1:59:38,21:38:1297:21:756:-50.6049,0,-99.263	0/1:50:30,20:30:1040:20:693:-47.6381,0,-78.855	0/1:127:68,59:68:2376:59:2043:-145.903,0,-175.863	0/1:203:95,108:95:3356:108:3834:-284.147,0,-241.146	0/0:152:152,0:152:5352:0:0:0,-45.7566,-480.878	0/0:106:106,0:106:3734:0:0:0,-31.9092,-336.262	0/1:123:53,70:53:1851:70:2474:-185.885,0,-129.84	0/1:211:118,93:118:4043:93:3268:-230.822,0,-300.548	0/0:144:143,1:143:4962:1:36:0,-39.75,-443.14	0/0:152:151,0:151:5268:0:0:0,-45.4555,-473.867	0/0:151:151,0:151:5293:0:0:0,-45.4555,-476.511	0/1:158:82,76:82:2880:76:2686:-194.423,0,-211.872	0/1:100:44,56:44:1554:56:1979:-148.281,0,-110.047	0/0:79:78,1:78:2679:1:36:0,-20.1831,-237.758	0/1:75:26,49:26:872:49:1736:-133.944,0,-56.2096	0/1:170:90,80:90:3204:80:2840:-204.658,0,-237.407	0/1:163:96,66:96:3350:66:2353:-162.758,0,-252.57	0/0:82:81,1:81:2880:1:36:0,-21.0862,-255.837	0/1:111:65,46:65:2303:46:1644:-114.83,0,-174.117	0/1:85:72,13:72:2463:13:464:-16.51,0,-196.334	0/0:104:104,0:104:3670:0:0:0,-31.3071,-330.432	0/1:256:138,118:138:4914:118:4184:-299.679,0,-365.349	0/1:229:121,108:121:4247:108:3832:-276.143,0,-313.476	0/1:62:29,32:29:1021:32:1120:-82.3819,0,-73.4779	0/0:262:261,1:261:9259:1:32:0,-75.6705,-830.077	0/1:108:60,48:60:2124:48:1716:-122.214,0,-158.915	0/1:117:71,46:71:2530:46:1639:-112.571,0,-192.73	0/1:13:7,6:7:252:6:212:-15.5114,0,-19.1156	0/1:27:8,19:8:288:19:684:-53.7625,0,-18.1396	0/0:21:21,0:21:739:0:0:0,-6.32163,-66.8324	0/1:17:9,8:9:294:8:277:-20.1476,0,-21.6581	0/0:16:16,0:16:544:0:0:0,-4.81648,-49.2797	0/0:321:320,0:320:11209:0:0:0,-96.3296,-1008.28	0/1:61:31,30:31:1107:30:1045:-75.9948,0,-81.5773	0/0:80:79,1:79:2734:1:36:0,-20.4851,-242.704	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:139:136,3:136:4843:3:108:0,-31.768,-425.865	0/1:70:36,34:36:1275:34:1199:-87.1412,0,-93.9802	0/1:185:112,73:112:3994:73:2604:-178.915,0,-303.959	0/1:122:70,52:70:2439:52:1837:-128.878,0,-183.034	0/0:71:71,0:71:2454:0:0:0,-21.3731,-221.111	0/0:99:99,0:99:3475:0:0:0,-29.802,-312.932	0/0:114:114,0:114:4036:0:0:0,-34.3174,-363.427	0/1:179:104,74:104:3678:74:2613:-181.609,0,-277.419	0/1:86:51,35:51:1813:35:1256:-87.4567,0,-137.561	0/0:163:159,4:159:5592:4:144:0,-35.7543,-490.087	0/1:144:74,70:74:2627:70:2479:-179.959,0,-193.33	0/1:18:8,9:8:284:9:324:-24.0285,0,-20.4262	0/0:83:83,0:83:2910:0:0:0,-24.9855,-262.136	0/1:79:36,43:36:1264:43:1528:-114.032,0,-90.2784	0/0:18:18,0:18:629:0:0:0,-5.41854,-56.9231	0/0:182:182,0:182:6468:0:0:0,-54.7875,-582.205	0/1:52:28,24:28:986:24:848:-60.9861,0,-73.3986	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/1:12:5,7:5:176:7:252:-19.4157,0,-12.5727	0/1:99:51,48:51:1797:48:1692:-122.764,0,-132.208	0/0:145:143,1:143:5006:1:36:0,-40.04,-447.164	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:132:76,56:76:2683:56:1978:-138.556,0,-201.978	0/1:177:95,82:95:3364:82:2889:-206.959,0,-249.694	0/0:99:99,0:99:3510:0:0:0,-29.802,-316.112	0/0:78:78,0:78:2763:0:0:0,-23.4803,-248.908	0/0:158:156,1:156:5525:1:32:0,-44.4023,-494.159	0/0:134:131,3:131:4625:3:108:0,-30.2628,-406.338	0/0:92:92,0:92:3241:0:0:0,-27.6948,-291.914	0/0:76:76,0:76:2714:0:0:0,-22.8783,-244.503	0/0:96:96,0:96:3382:0:0:0,-28.8989,-304.596	0/1:20:8,12:8:279:12:428:-32.8382,0,-19.4269	0/1:100:60,40:60:2117:40:1436:-98.9421,0,-160.65	0/0:158:156,2:156:5493:2:72:0,-40.726,-487.664	0/0:199:199,0:199:7020:0:0:0,-59.905,-630.85	0/0:155:154,1:154:5482:1:36:0,-43.0614,-489.909	0/1:114:61,53:61:2120:53:1877:-134.882,0,-156.745	0/0:148:146,2:146:5202:2:68:0,-38.0951,-461.863	0/1:19:9,10:9:305:10:360:-27.0247,0,-22.0576	0/1:119:67,52:67:2370:52:1832:-129.338,0,-177.725	0/1:160:72,88:72:2530:88:3104:-231.419,0,-179.782	0/0:243:239,2:239:8379:2:72:0,-66.0713,-747.291	0/0:79:78,1:78:2730:1:36:0,-20.1831,-242.344	0/0:171:170,1:170:5906:1:36:0,-47.8779,-528.059	0/1:106:57,49:57:1952:49:1751:-125.962,0,-144.042	0/1:237:132,105:132:4628:105:3736:-265.086,0,-345.342	0/0:28:28,0:28:976:0:0:0,-8.42884,-88.1488	0/0:136:135,0:135:4628:0:0:0,-40.639,-416.334	0/0:134:134,0:134:4623:0:0:0,-40.338,-416.003	0/0:134:133,1:133:4603:1:36:0,-36.7397,-410.836	0/1:197:87,110:87:3030:110:3887:-290.72,0,-213.627	0/1:124:41,83:41:1424:83:2894:-223.358,0,-91.125	0/0:100:96,4:96:3384:4:144:0,-16.7894,-291.461	0/0:219:218,1:218:7556:1:36:0,-62.3273,-676.498
chr04	28418453	.	G	A	96888.8	PASS	AB=0.507861;ABP=4.47833;AC=142;AF=0.755319;AN=188;AO=4561;CIGAR=1X;DP=5916;DPB=5916;DPRA=0;EPP=9907.1;EPPR=2941.01;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9351;MQMR=59.9741;NS=94;NUMALT=1;ODDS=3.94957;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163345;QR=48168;RO=1353;RPL=4561;RPP=9907.1;RPPR=2941.01;RPR=0;RUN=1;SAF=0;SAP=9907.1;SAR=4561;SRF=0;SRP=2941.01;SRR=1353;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:21:14,7:14:492:7:252:-16.7073,0,-38.2907	1/1:69:0,69:0:0:69:2476:-223.093,-20.7711,0	1/1:112:1,111:1:36:111:3976:-354.421,-30.1171,0	1/1:118:0,118:0:0:118:4228:-380.7,-35.5215,0	0/1:26:7,19:7:252:19:680:-53.7024,0,-15.2022	0/1:6:4,2:4:136:2:72:-5.03054,0,-10.7694	0/1:67:37,30:37:1305:30:1072:-76.6119,0,-97.5804	0/1:122:62,58:62:2212:58:2068:-149.908,0,-162.862	1/1:72:0,72:0:0:72:2576:-230.803,-21.6742,0	1/1:48:0,48:0:0:48:1716:-154.726,-14.4494,0	0/1:81:43,38:43:1518:38:1342:-96.6952,0,-112.528	0/1:101:37,64:37:1306:64:2286:-175.596,0,-87.4359	1/1:63:0,63:0:0:63:2264:-204.022,-18.9649,0	1/1:96:0,96:0:0:96:3443:-310.082,-28.8989,0	1/1:72:0,72:0:0:72:2571:-231.639,-21.6742,0	0/1:81:44,37:44:1567:37:1332:-95.799,0,-116.937	0/1:58:30,28:30:1059:28:1008:-73.5766,0,-78.1607	1/1:44:0,44:0:0:44:1571:-141.681,-13.2453,0	0/1:42:29,13:29:1032:13:464:-29.4542,0,-80.5502	0/1:90:46,44:46:1640:44:1580:-115.398,0,-120.796	0/1:107:49,58:49:1744:58:2061:-153.548,0,-125.033	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	0/1:47:21,26:21:752:26:932:-70.0505,0,-53.8578	0/1:16:2,14:2:72:14:504:-40.8816,0,-2.02024	1/1:70:1,69:1:36:69:2472:-219.135,-17.4738,0	0/1:150:71,79:71:2540:79:2840:-210.683,0,-183.697	0/1:126:60,66:60:2148:66:2368:-175.448,0,-155.658	0/1:16:8,8:8:288:8:284:-21.0869,0,-21.4509	1/1:155:0,155:0:0:155:5552:-499.8,-46.6597,0	0/1:73:35,38:35:1252:38:1364:-101.086,0,-91.0099	0/1:45:19,26:19:680:26:932:-70.6525,0,-47.9828	0/1:9:4,5:4:140:5:180:-13.8428,0,-10.2353	0/1:23:16,7:16:572:7:252:-16.1053,0,-44.8897	1/1:18:0,18:0:0:18:633:-57.2951,-5.41854,0	0/1:12:7,5:7:248:5:180:-12.9397,0,-19.0518	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:146:0,146:0:0:146:5230:-470.837,-43.9504,0	0/1:22:8,14:8:288:14:500:-38.7135,0,-19.6447	1/1:53:0,53:0:0:53:1908:-171.998,-15.9546,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:68:2,66:2:72:66:2364:-206.095,-13.6333,0	0/1:42:20,22:20:708:22:787:-58.5112,0,-51.4023	0/1:111:48,63:48:1720:63:2253:-169.619,0,-121.671	0/1:59:23,36:23:807:36:1296:-99.1832,0,-55.1884	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:67:0,67:0:0:67:2396:-215.897,-20.169,0	1/1:78:0,78:0:0:78:2791:-251.43,-23.4803,0	0/1:77:35,42:35:1228:42:1508:-112.835,0,-87.6445	0/1:36:13,23:13:464:23:824:-63.6462,0,-31.2604	1/1:102:1,101:1:36:101:3628:-323.126,-27.1068,0	0/1:67:39,28:39:1396:28:1004:-70.5069,0,-105.77	0/1:12:5,7:5:180:7:248:-19.0514,0,-12.9397	1/1:52:0,52:0:0:52:1868:-168.399,-15.6536,0	0/1:47:29,18:29:1044:18:640:-43.409,0,-80.1264	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:108:0,108:0:0:108:3870:-348.445,-32.5112,0	0/1:23:14,9:14:500:9:320:-22.2187,0,-38.4109	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:58:25,33:25:884:33:1172:-88.3278,0,-62.4186	1/1:76:1,75:1:36:75:2683:-238.116,-19.28,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:62:27,35:27:956:35:1256:-94.6814,0,-67.6919	0/1:129:57,72:57:2020:72:2584:-193.976,0,-143.24	1/1:65:0,65:0:0:65:2328:-209.78,-19.567,0	1/1:37:0,37:0:0:37:1320:-119.102,-11.1381,0	1/1:92:0,92:0:0:92:3304:-297.578,-27.6948,0	1/1:99:0,99:0:0:99:3556:-320.247,-29.802,0	1/1:59:0,59:0:0:59:2116:-190.709,-17.7608,0	1/1:53:0,53:0:0:53:1896:-170.918,-15.9546,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.0188	0/1:46:24,22:24:840:22:792:-57.7133,0,-62.0708	1/1:87:0,87:0:0:87:3100:-279.228,-26.1896,0	1/1:98:0,98:0:0:98:3484:-312.409,-29.5009,0	1/1:95:0,95:0:0:95:3412:-307.293,-28.5979,0	0/1:62:30,32:30:1064:32:1144:-84.6057,0,-77.4078	1/1:67:0,67:0:0:67:2400:-216.246,-20.169,0	0/1:14:9,5:9:312:5:180:-12.3376,0,-24.2009	0/1:72:37,35:37:1324:35:1252:-91.3066,0,-97.7879	0/1:105:64,41:64:2292:41:1457:-99.8158,0,-174.932	1/1:102:2,100:2:72:100:3566:-314.311,-23.8683,0	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	1/1:87:0,87:0:0:87:3115:-280.574,-26.1896,0	0/1:49:21,28:21:739:28:1004:-75.9254,0,-52.0819	0/1:116:50,66:50:1783:66:2376:-179.178,0,-125.833	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	1/1:76:1,75:1:36:75:2679:-237.755,-19.28,0	1/1:64:0,64:0:0:64:2291:-206.215,-19.2659,0	1/1:96:0,96:0:0:96:3448:-310.526,-28.8989,0	0/1:128:66,62:66:2368:62:2228:-162.252,0,-174.846	0/1:60:44,16:44:1576:16:576:-34.1132,0,-124.07	1/1:47:0,47:0:0:47:1688:-152.162,-14.1484,0	1/1:91:0,91:0:0:91:3264:-293.98,-27.3937,0
chr04	28538284	.	AA	AG	45164.8	PASS	AB=0.487993;ABP=9.84158;AC=45;AF=0.239362;AN=188;AO=2694;CIGAR=1M1X;DP=11266;DPB=11266;DPRA=1.22678;EPP=5697.66;EPPR=17911.1;GTI=0;LEN=1;MEANALT=1.06897;MQM=59.5189;MQMR=59.9109;NS=94;NUMALT=1;ODDS=10.427;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=95936;QR=304133;RO=8564;RPL=18;RPP=5697.66;RPPR=17911.1;RPR=2676;RUN=1;SAF=2694;SAP=5852.96;SAR=0;SRF=8564;SRP=18599.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:34:17,14:17:590:14:489:-34.6506,0,-43.7338	0/0:319:317,1:317:11236:1:36:0,-92.4141,-1007.59	0/0:113:113,0:113:4018:0:0:0,-34.0164,-361.796	0/0:139:139,0:139:4963:0:0:0,-41.8432,-446.749	0/1:76:33,43:33:1186:43:1548:-116.699,0,-84.1703	0/1:52:26,26:26:907:26:924:-67.8125,0,-66.2894	0/1:150:83,67:83:2971:67:2395:-170.602,0,-222.467	0/1:340:181,159:181:6441:159:5674:-408.373,0,-477.427	0/0:58:58,0:58:2038:0:0:0,-17.4597,-183.67	0/0:107:107,0:107:3814:0:0:0,-32.2102,-343.457	0/1:142:65,76:65:2314:76:2721:-202.201,0,-165.735	0/1:89:48,40:48:1726:40:1428:-101.954,0,-128.775	0/0:78:78,0:78:2766:0:0:0,-23.4803,-249.048	0/0:174:174,0:174:6227:0:0:0,-52.3792,-560.072	0/0:87:86,1:86:3057:1:36:0,-22.5913,-271.753	0/1:83:39,44:39:1354:44:1572:-116.746,0,-97.1674	0/1:100:50,50:50:1776:50:1800:-132.162,0,-130.012	0/0:79:79,0:79:2815:0:0:0,-23.7814,-253.589	0/1:50:32,18:32:1148:18:644:-43.2391,0,-88.5721	0/1:191:99,92:99:3530:92:3298:-239.508,0,-260.412	0/1:105:69,36:69:2438:36:1288:-84.6048,0,-188.065	0/0:89:89,0:89:3137:0:0:0,-26.7917,-282.557	0/0:26:24,2:24:862:2:72:0,-0.990057,-71.0656	0/0:91:86,5:86:3075:5:180:0,-10.8417,-260.426	0/0:59:59,0:59:2076:0:0:0,-17.7608,-187.108	0/1:333:170,163:170:6016:163:5765:-418.703,0,-441.28	0/1:201:104,97:104:3681:97:3484:-253.2,0,-270.407	0/1:26:18,8:18:646:8:284:-18.0703,0,-50.6446	0/0:191:191,0:191:6778:0:0:0,-57.4967,-610.093	0/1:236:110,126:110:3914:126:4470:-330.847,0,-281.412	0/1:76:44,32:44:1576:32:1116:-77.8638,0,-119.248	0/1:8:2,6:2:70:6:216:-17.3823,0,-4.23909	0/1:36:16,20:16:554:20:720:-54.281,0,-39.347	0/0:17:17,0:17:597:0:0:0,-5.11751,-54.0572	0/1:7:1,6:1:36:6:216:-17.6297,0,-1.49106	0/0:33:33,0:33:1169:0:0:0,-9.93399,-105.517	0/0:222:221,0:221:7885:0:0:0,-66.5276,-708.761	0/1:230:107,123:107:3824:123:4319:-318.716,0,-275.118	0/0:97:97,0:97:3480:0:0:0,-29.1999,-313.411	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:281:278,3:278:9825:3:108:0,-74.5143,-874.091	0/1:45:24,21:24:849:21:741:-53.4546,0,-63.1826	0/1:185:85,100:85:3013:100:3561:-264.988,0,-215.71	0/1:76:32,44:32:1150:44:1584:-119.961,0,-80.9318	0/0:62:62,0:62:2202:0:0:0,-18.6639,-198.444	0/0:64:63,1:63:2250:1:36:0,-15.6676,-199.165	0/0:185:185,0:185:6620:0:0:0,-55.6905,-595.742	0/1:192:93,99:93:3289:99:3506:-257.935,0,-238.414	0/1:163:90,73:90:3213:73:2594:-184.617,0,-240.324	0/0:223:223,0:223:7864:0:0:0,-67.1297,-707.603	0/1:144:72,72:72:2577:72:2525:-184.127,0,-188.83	0/1:17:8,9:8:277:9:320:-24.0248,0,-20.1476	0/0:213:213,0:213:7536:0:0:0,-64.1194,-678.26	0/1:86:55,31:55:1972:31:1104:-73.7771,0,-151.867	0/0:41:41,0:41:1437:0:0:0,-12.3422,-129.623	0/0:127:126,1:126:4484:1:36:0,-34.6325,-400.111	0/1:26:10,16:10:336:16:570:-43.7891,0,-22.737	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.03	0/1:31:9,22:9:316:22:764:-59.721,0,-19.4471	0/1:114:66,48:66:2336:48:1724:-120.901,0,-176.178	0/0:219:216,3:216:7665:3:108:0,-55.8568,-679.8	0/0:9:9,0:9:309:0:0:0,-2.70927,-28.1413	0/1:134:82,52:82:2913:52:1849:-126.35,0,-222.066	0/1:270:134,136:134:4719:136:4849:-355.251,0,-343.466	0/0:147:139,8:139:4949:8:288:0,-17.984,-419.102	0/0:79:79,0:79:2788:0:0:0,-23.7814,-251.153	0/0:162:162,0:162:5773:0:0:0,-48.7669,-519.685	0/0:228:225,3:225:7955:3:104:0,-58.932,-706.117	0/0:63:63,0:63:2241:0:0:0,-18.9649,-201.942	0/0:124:124,0:124:4377:0:0:0,-37.3277,-394.105	0/1:164:85,79:85:3024:79:2816:-204.303,0,-223.01	0/1:57:31,26:31:1104:26:913:-65.324,0,-82.5116	0/1:127:49,78:49:1734:78:2779:-212.064,0,-118.112	0/0:69:69,0:69:2422:0:0:0,-20.7711,-218.233	0/0:167:167,0:167:5936:0:0:0,-50.272,-534.329	0/0:179:179,0:179:6333:0:0:0,-53.8844,-570.018	0/1:291:181,110:181:6343:110:3921:-264.853,0,-483.188	0/0:165:163,2:163:5808:2:72:0,-42.8332,-515.998	0/1:11:5,6:5:172:6:212:-16.1101,0,-12.5061	0/1:133:61,72:61:2181:72:2561:-190.691,0,-156.518	0/1:116:61,55:61:2167:55:1959:-141.645,0,-160.376	0/0:198:198,0:198:7011:0:0:0,-59.6039,-631.055	0/0:146:145,1:145:5114:1:36:0,-40.3521,-456.804	0/0:93:93,0:93:3320:0:0:0,-27.9958,-299.017	0/1:85:44,41:44:1578:41:1452:-105.372,0,-116.724	0/1:146:75,71:75:2660:71:2537:-184.623,0,-195.696	0/0:54:54,0:54:1932:0:0:0,-16.2556,-174.157	0/0:83:83,0:83:2964:0:0:0,-24.9855,-266.99	0/0:70:69,0:69:2468:0:0:0,-20.7711,-222.011	0/0:108:108,0:108:3841:0:0:0,-32.5112,-345.886	0/1:204:99,105:99:3526:105:3776:-278.201,0,-256.129	0/1:73:23,50:23:818:50:1800:-140.288,0,-51.9665	0/0:126:125,1:125:4475:1:36:0,-34.3315,-399.297	0/0:102:102,0:102:3664:0:0:0,-30.7051,-329.963
chr04	28980314	.	T	C	353943	PASS	AB=0.289116;ABP=46181.4;AC=91;AF=0.484043;AN=188;AO=34619;CIGAR=1X;DP=120436;DPB=120436;DPRA=0;EPP=75125.1;EPPR=186298;GTI=23;LEN=1;MEANALT=1.2234;MQM=37.9926;MQMR=44.9769;NS=94;NUMALT=1;ODDS=5.01339;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1239585;QR=3061973;RO=85792;RPL=0;RPP=75177.2;RPPR=186298;RPR=34619;RUN=1;SAF=34613;SAP=75125.1;SAR=6;SRF=85792;SRP=186298;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:699:476,223:476:16913:223:8004:-465.454,0,-1240.71	0/1:519:377,142:377:13419:142:5061:-273.874,0,-1006.1	0/1:1373:1002,369:1002:35743:369:13222:-706.843,0,-2657.06	0/1:3313:2357,954:2357:84200:954:34169:-1853.37,0,-6404.19	0/1:1961:1426,534:1426:50931:534:19117:-1004.95,0,-3804.33	0/1:872:629,243:629:22437:243:8700:-475.632,0,-1649.1	0/1:1329:912,415:912:32613:415:14881:-843.654,0,-2429.23	0/1:1670:1334,335:1334:47599:335:11979:-513.367,0,-3558.47	0/1:1927:1184,742:1184:42257:742:26566:-1673.5,0,-3029.2	0/1:694:479,215:479:17112:215:7724:-437.435,0,-1301.26	0/1:466:381,85:381:13627:85:3045:-114.036,0,-1049.79	0/1:1535:1143,391:1143:40854:391:13993:-723.722,0,-3019.81	0/1:1098:806,292:806:28855:292:10484:-556.315,0,-2125.74	0/1:522:426,96:426:15217:96:3440:-132.184,0,-1162.4	0/1:600:461,139:461:16510:139:4980:-235.285,0,-1269.83	0/1:835:609,226:609:21661:226:8112:-427.368,0,-1617.15	0/1:452:344,108:344:12234:108:3880:-191.807,0,-911.327	0/1:459:328,130:328:11726:130:4664:-256.713,0,-865.381	0/1:256:212,44:212:7600:44:1580:-56.0579,0,-571.921	0/1:2761:1999,762:1999:71483:762:27317:-1449.43,0,-5385.6	0/1:3834:2558,1276:2558:91239:1276:45645:-2659.44,0,-6744.36	0/1:872:634,238:634:22624:238:8537:-483.715,0,-1744.62	0/1:1024:696,327:696:24816:327:11717:-671.724,0,-1851.44	0/1:842:481,361:481:17093:361:12906:-825.11,0,-1211.09	0/1:1776:1178,597:1178:42096:597:21362:-1253.85,0,-3107.41	0/1:2494:1727,766:1727:61644:766:27456:-1648.66,0,-4648.64	0/1:2490:1763,726:1763:63073:726:26021:-1426.26,0,-4710.09	0/1:322:249,72:249:8907:72:2580:-119.026,0,-669.215	0/1:2616:1841,775:1841:65745:775:27788:-1641.06,0,-5037.87	0/1:1073:883,190:883:31403:190:6804:-247.291,0,-2372.82	0/1:827:612,215:612:21800:215:7704:-393.498,0,-1648.21	0/1:222:193,29:193:6887:29:1025:-18.6109,0,-524.607	0/1:402:325,77:325:11604:77:2772:-110.51,0,-881.715	0/0:429:406,23:406:14554:23:809:0,-59.9729,-1156.95	0/0:350:322,28:322:11395:28:1004:0,-19.6973,-869.548	0/1:721:579,142:579:20685:142:5072:-214.525,0,-1529.48	0/1:2746:1966,780:1966:70222:780:27866:-1603.26,0,-5369.92	0/1:1349:904,445:904:32212:445:15948:-925.149,0,-2395.65	0/1:440:352,88:352:12632:88:3148:-134.544,0,-948.93	0/0:110:105,5:105:3746:5:180:0,-17.6829,-307.454	0/1:1015:840,175:840:29839:175:6260:-216.247,0,-2266.84	0/1:288:221,67:221:7937:67:2396:-114.482,0,-599.074	0/1:3671:2608,1063:2608:92646:1063:38075:-2077.25,0,-6955.58	0/1:683:535,148:535:19163:148:5316:-240.136,0,-1467.09	0/1:866:596,269:596:21265:269:9644:-542.285,0,-1597.29	0/1:3655:2466,1189:2466:87642:1189:42447:-2611.05,0,-6637.86	0/1:1598:1207,390:1207:42814:390:13946:-701.764,0,-3184.53	0/1:3558:2686,872:2686:95877:872:31234:-1538.41,0,-7283.17	0/1:1093:742,351:742:26565:351:12580:-722.991,0,-1993.23	0/1:1222:958,264:958:34312:264:9465:-423.133,0,-2663.59	0/1:1494:965,528:965:34530:528:18895:-1201.9,0,-2589.85	0/1:284:252,32:252:8961:32:1152:-9.88973,0,-697.444	0/1:2232:1575,656:1575:56334:656:23497:-1317.94,0,-4122.38	0/1:884:704,180:704:25105:180:6448:-297.383,0,-1928.59	0/1:217:190,27:190:6781:27:972:-17.3339,0,-509.623	0/1:3009:2000,1009:2000:71218:1009:36090:-2110.64,0,-5243.1	0/1:639:427,211:427:15183:211:7549:-437.442,0,-1130.2	0/1:335:268,67:268:9532:67:2388:-107.824,0,-736.084	0/1:314:238,76:238:8513:76:2713:-143.184,0,-655.148	0/1:1127:837,290:837:29779:290:10400:-530.237,0,-2237.2	0/1:1250:882,368:882:31582:368:13165:-719.901,0,-2383.03	0/1:176:150,26:150:5377:26:921:-24.3739,0,-414.511	0/1:2089:1593,496:1593:56957:496:17753:-923.737,0,-4372.65	0/1:2906:2004,900:2004:71642:900:32190:-1805.28,0,-5367.7	0/1:618:449,169:449:16003:169:6053:-320.858,0,-1193.74	0/1:1067:751,315:751:26787:315:11263:-617.591,0,-2036.82	0/1:3522:2236,1286:2236:79817:1286:46065:-2781.08,0,-5926.98	0/1:1044:690,354:690:24639:354:12692:-743.34,0,-1866.31	0/1:550:431,119:431:15414:119:4272:-191.331,0,-1162.39	0/1:932:522,410:522:18603:410:14682:-963.616,0,-1319.18	0/1:661:463,198:463:16521:198:7085:-419.286,0,-1259.95	0/1:188:157,31:157:5621:31:1112:-36.4006,0,-433.451	0/1:2644:1941,703:1941:69232:703:25133:-1336.18,0,-5068.13	0/1:842:507,335:507:18067:335:12024:-765.177,0,-1302.03	0/1:2189:1455,734:1455:51860:734:26269:-1535.75,0,-3827.22	0/1:1578:1108,470:1108:39784:470:16868:-935.054,0,-3024.71	0/1:1418:1123,295:1123:39933:295:10560:-468.92,0,-2985.89	0/1:1673:1172,501:1172:41849:501:17957:-1016.99,0,-3062.06	0/1:442:365,77:365:12983:77:2756:-101.204,0,-962.099	0/1:2035:1355,680:1355:48484:680:24345:-1419.72,0,-3592.94	0/1:1903:1403,500:1403:49980:500:17908:-947.004,0,-3682.86	0/1:3412:2199,1213:2199:78650:1213:433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chr04	28980330	.	CTGAT	ATGAC,CTGAC	1.36614e+06	PASS	AB=0.510228,0.307843;ABP=113.743,39091.4;AC=95,72;AF=0.505319,0.382979;AN=188;AO=62578,37543;CIGAR=1X3M1X,4M1X;DP=122315;DPB=122314;DPRA=0,0;EPP=134849,79146.9;EPPR=46580.8;GTI=17;LEN=5,1;MEANALT=5.74468,5.74468;MQM=40.1933,39.645;MQMR=56.8783;NS=94;NUMALT=2;ODDS=4.23956;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=2201032,1343443;QR=768641;RO=21721;RPL=120,270;RPP=134849,79198.3;RPPR=46580.8;RPR=62458,37273;RUN=1,1;SAF=62578,37537;SAP=135889,81474.5;SAR=0,6;SRF=21721;SRP=47169.6;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:716:147,290,277:147:5203:290,277:10070,9934:-1066.91,-349.639,-678.261,-345.586,0,-678.127	0/1:526:165,217,143:165:5834:217,143:7632,5105:-527.809,0,-409.841,-187.196,-84.893,-619.315	1/2:1396:334,685,374:334:11783:685,374:24055,13374:-1782.99,-61.2772,-814.527,-862.788,0,-1709.66	1/2:3375:671,1733,958:671:23684:1733,958:60743,34250:-5227.52,-643.014,-2049.51,-2858.3,0,-4498.1	1/2:1983:130,1235,603:130:4600:1235,603:43387,21630:-4590.1,-1263.66,-1266.22,-2991.23,0,-3184.04	1/2:886:78,527,277:78:2747:527,277:18525,9931:-1928.88,-543.651,-606.711,-1187,0,-1325.32	1/2:1346:148,731,464:148:5260:731,464:25703,16600:-2816.57,-847.355,-1038.32,-1602.75,0,-1874.09	1/2:1696:371,880,439:371:13119:880,439:30861,15706:-2415.73,-183.108,-952.404,-1310.1,0,-2212.15	1/2:1950:320,870,742:320:11305:870,742:30661,26564:-3338.61,-1109.5,-1768.27,-1404.77,0,-2102.07	1/2:706:182,305,217:182:6431:305,217:10767,7744:-852.054,-58.8295,-490.77,-324.25,0,-782.676	0/1:472:112,258,102:112:3977:258,102:9146,3659:-683.73,0,-239.695,-439.581,-39.4998,-726.232	1/2:1562:180,928,449:180:6406:928,449:32696,16081:-3142.24,-715.342,-958.078,-1958.98,0,-2345.91	1/2:1113:165,651,294:165:5871:651,294:23141,10547:-2024.61,-325.259,-607.769,-1270.53,0,-1660.5	0/1:531:112,324,95:112:3987:324,95:11447,3404:-849.689,0,-227.429,-626.222,-67.7893,-922.58	0/1:604:158,305,138:158:5595:305,138:10790,4956:-801.296,0,-363.922,-477.057,-83.9414,-891.244	1/2:854:107,475,268:107:3813:475,268:16734,9575:-1690.61,-428.383,-586.176,-993.653,0,-1213.76	1/2:464:62,275,125:62:2213:275,125:9698,4496:-882.029,-164.787,-262.423,-555.473,0,-698.263	1/2:467:84,253,130:84:2973:253,130:8959,4656:-766.871,-113.23,-279.166,-436.819,0,-639.781	0/1:262:63,140,58:63:2235:140,58:4962,2073:-357.842,0,-135.123,-217.014,-17.479,-376.821	1/2:2798:425,1484,878:425:15073:1484,878:52248,31447:-5184.34,-1208.27,-1942.62,-2922.93,0,-3839.7	1/2:3906:652,1789,1450:652:22988:1789,1450:62792,51856:-6786.7,-2112.64,-3396.06,-3048.36,0,-4433.84	0/1:888:279,366,239:279:9862:366,239:12870,8584:-936.111,0,-693.014,-342.212,-125.309,-1073.46	0/1:1050:376,341,332:376:13268:341,332:11910,11847:-820.946,0,-944.467,-42.6447,-155.632,-989.817	1/2:851:145,339,365:145:5115:339,365:11940,13078:-1451.86,-579.083,-881.082,-512.368,0,-806.54	1/2:1803:268,921,601:268:9458:921,601:32338,21536:-3270.18,-851.733,-1344.66,-1728.94,0,-2318.19	1/2:2534:570,1034,918:570:20186:1034,918:36418,32831:-3749.32,-1028.66,-2295.1,-1314.55,0,-2615.91	1/2:2522:636,963,908:636:22552:963,908:33905,32485:-3154.07,-715.969,-2194.96,-860.674,0,-2356.22	1/2:323:75,161,87:75:2664:161,87:5714,3115:-447.123,-28.7498,-189.209,-232.023,0,-414.757	1/2:2651:738,1127,776:738:26130:1127,776:39646,27765:-2993.27,-65.1506,-1854.34,-1021.82,0,-2916.68	1/2:1094:168,686,233:168:5942:686,233:24070,8334:-1979.48,-172.35,-431.773,-1391.77,0,-1787.56	1/2:838:137,440,260:137:4843:440,260:15438,9285:-1494.71,-326.349,-574.075,-829.423,0,-1131.33	0/1:224:47,144,32:47:1675:144,32:5070,1144:-377.494,0,-87.419,-305.52,-44.648,-426.65	1/2:407:84,218,105:84:2985:218,105:7696,3764:-625.663,-54.4103,-223.246,-362.076,0,-564.927	1/1:438:19,393,24:19:670:393,24:13883,860:-1108.88,-63.7449,0,-1048.59,-52.3026,-1095.92	1/2:358:11,311,35:11:375:311,35:10874,1260:-883.522,-67.0141,-3.81848,-789.393,0,-809.283	1/2:727:54,531,141:54:1940:531,141:18653,5017:-1621.78,-225.904,-224.326,-1253.85,0,-1369.67	1/2:2772:450,1534,777:450:15924:1534,777:54240,27779:-5063.73,-892.589,-1727.85,-3009.56,0,-4072.7	1/2:1355:219,622,507:219:7709:622,507:21923,18142:-2381.54,-749.591,-1189.93,-1070.28,0,-1545.24	0/1:441:88,267,85:88:3125:267,85:9387,3038:-687.558,0,-174.266,-482.395,-22.9981,-711.445	0/1:111:12,93,5:12:417:93,5:3260,180:-248.634,0,-5.91096,-238.657,-20.3205,-271.055	0/1:1030:271,575,181:271:9573:575,181:20172,6444:-1483.59,0,-576.379,-1081.42,-265.728,-1776.4	1/2:293:59,154,79:59:2103:154,79:5447,2825:-453.303,-48.6156,-168.387,-256.314,0,-398.659	1/2:3749:838,1612,1283:838:29592:1612,1283:56200,45899:-5219.02,-1116.92,-3014.12,-1971.89,0,-3968.13	1/2:698:174,335,188:174:6190:335,188:11829,6747:-910.516,-30.8679,-416.119,-445.93,0,-875.431	1/2:878:128,475,271:128:4528:475,271:16709,9667:-1626.22,-355.546,-581.372,-940.377,0,-1227.61	1/2:3743:614,1923,1187:614:21739:1923,1187:67288,42435:-6740.89,-1580.95,-2772.86,-3573.98,0,-4987.45	1/2:1628:343,878,393:343:12161:878,393:30796,14068:-2312.36,-83.2991,-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chr04	28980349	.	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chr04	28980355	.	ACG	GCG,GTG	2.17991e+06	PASS	AB=0.685743,0.289709;ABP=35954.8,46085.3;AC=97,91;AF=0.515957,0.484043;AN=188;AO=83091,34814;CIGAR=1X2M,2X1M;DP=120854;DPB=120860;DPRA=0,0;EPP=180433,75548.5;EPPR=29.068;GTI=10;LEN=1,2;MEANALT=4.82979,4.82979;MQM=45.3522,37.8006;MQMR=53.8333;NS=94;NUMALT=2;ODDS=80514.9;PAIRED=0,0;PAIREDR=0;PAO=5.33333,5.33333;PQA=184,184;PQR=0;PRO=0;QA=2954206,1229687;QR=425;RO=12;RPL=83090,34814;RPP=180424,75600.7;RPPR=29.068;RPR=1,0;RUN=1,1;SAF=83090,34808;SAP=180424,75548.5;SAR=1,6;SRF=12;SRP=29.068;SRR=0;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:702:0,453,222:0:0:453,222:16021,7795:-1845.34,-594.083,-457.716,-1251.29,0,-1184.46	1/2:517:0,373,142:0:0:373,142:13251,5020:-1422.76,-383.548,-271.264,-1039.26,0,-996.518	1/2:1375:0,1003,366:0:0:1003,366:35532,12950:-3755.62,-988.401,-686.468,-2767.3,0,-2657.12	1/2:3320:0,2343,969:0:0:2343,969:83493,34132:-9216.75,-2568.3,-1862.98,-6648.51,0,-6356.81	1/2:1965:1,1419,539:1:36:1419,539:50524,19053:-5381.07,-1431.35,-1007.12,-3947.13,0,-3787.81	1/2:873:0,623,237:0:0:623,237:22134,8375:-2343.78,-638.999,-451.457,-1704.81,0,-1633.47	1/2:1334:0,859,418:0:0:859,418:30456,14738:-3522.39,-1110.19,-851.608,-2412.22,0,-2286.39	1/2:1672:0,1232,332:0:0:1232,332:43749,11584:-4285.36,-884.479,-513.61,-3400.9,0,-3300.96	1/2:1933:1,1182,742:1:36:1182,742:41877,26204:-5243.92,-1998.69,-1645.8,-3242.62,0,-3022.19	1/2:690:0,471,215:0:0:471,215:16887,7596:-1922.28,-571.782,-429.996,-1350.5,0,-1285.78	1/2:470:0,366,86:0:0:366,86:13038,3035:-1266.57,-228.672,-118.495,-1037.92,0,-1012.03	1/2:1533:0,1139,389:0:0:1139,389:40212,13660:-4149.33,-1043.29,-700.421,-3106.09,0,-2988.99	1/2:1095:0,801,290:0:0:801,290:28362,10177:-2967.01,-776.846,-535.721,-2190.2,0,-2102.9	1/2:520:0,426,92:0:0:426,92:15110,3255:-1434.71,-245.599,-117.36,-1189.14,0,-1161.44	1/2:601:0,460,139:0:0:460,139:16345,4913:-1673.55,-370.243,-231.769,-1303.42,0,-1261.58	1/2:849:0,592,231:0:0:592,231:20970,8146:-2258.73,-614.554,-436.344,-1644.2,0,-1574.66	1/2:461:0,353,107:0:0:353,107:12506,3774:-1256.45,-287.8,-181.536,-968.73,0,-936.52	1/2:458:0,330,128:0:0:330,128:11673,4511:-1248.74,-344.571,-245.231,-904.503,0,-865.971	1/2:259:0,199,44:0:0:199,44:7055,1537:-665.09,-117.097,-57.1924,-548.006,0,-534.761	1/2:2775:0,1868,770:0:0:1868,770:66377,27271:-7322.48,-2053.63,-1491.31,-5268.86,0,-5037.07	1/2:3847:0,2404,1279:0:0:2404,1279:85444,45174:-10129.6,-3400.97,-2677.3,-6728.68,0,-6343.67	1/2:876:0,631,242:0:0:631,242:22516,8577:-2489.17,-677.702,-487.752,-1811.53,0,-1738.68	1/2:1039:0,612,334:0:0:612,334:21793,11862:-2637.76,-893.643,-709.412,-1744.14,0,-1643.59	1/2:843:0,443,361:0:0:443,361:15664,12748:-2189.45,-959.772,-826.415,-1229.7,0,-1121.03	1/2:1790:0,1174,608:0:0:1174,608:41728,21535:-4899.19,-1622.57,-1269.16,-3276.69,0,-3093.66	1/2:2501:1,1547,764:1:36:1547,764:55211,27055:-6567.59,-2133.64,-1670.88,-4431.35,0,-4204.3	1/2:2496:0,1564,727:0:0:1564,727:55687,25723:-6348.41,-1937.42,-1466.6,-4411.01,0,-4192.16	1/2:319:0,225,74:0:0:225,74:7981,2609:-825.219,-196.776,-129.044,-628.46,0,-606.184	1/2:2617:0,1841,772:0:0:1841,772:65594,27395:-7435.13,-2164.09,-1609.89,-5271.1,0,-5038.71	1/2:1087:0,844,189:0:0:844,189:29860,6650:-2839.16,-501.31,-247.241,-2337.87,0,-2280.97	1/2:831:0,572,220:0:0:572,220:20361,7701:-2199.14,-580.048,-407.859,-1619.12,0,-1552.89	1/2:220:0,173,29:0:0:173,29:6137,1029:-558.168,-77.3224,-25.2442,-480.855,0,-472.125	1/2:404:0,298,79:0:0:298,79:10633,2783:-1046.77,-209.313,-119.607,-837.469,0,-813.687	1/1:426:0,401,23:0:0:401,23:14231,812:-1207.4,-120.713,0,-1144.97,-58.2229,-1138.04	1/1:346:0,316,29:0:0:316,29:11128,1004:-942.622,-95.1255,0,-865.821,-18.23,-857.091	1/2:711:0,569,138:0:0:569,138:20179,4865:-1919.17,-371.681,-200.395,-1547.58,0,-1506.04	1/2:2727:0,1951,772:0:0:1951,772:69341,27310:-7702.84,-2152.39,-1565.08,-5550.48,0,-5318.09	1/2:1348:0,899,446:0:0:899,446:31907,15675:-3696.49,-1178.82,-908.199,-2517.74,0,-2383.48	1/2:431:1,342,88:1:36:342,88:12166,3076:-1174.72,-231.947,-131.925,-940.121,0,-916.56	1/1:110:0,104,5:0:0:104,5:3708,172:-321.492,-31.3071,0,-308.469,-18.2133,-306.964	1/2:1022:0,763,178:0:0:763,178:27088,6272:-2601.6,-470.078,-240.392,-2131.54,0,-2077.96	1/2:288:0,201,69:0:0:201,69:7128,2423:-744.487,-183.184,-122.677,-561.312,0,-540.541	1/2:3715:0,2541,1088:0:0:2541,1088:90374,38442:-10041.6,-2894.79,-2129.87,-7146.81,0,-6819.29	1/2:691:0,499,147:0:0:499,147:17817,5218:-1815.77,-393.411,-243.197,-1422.39,0,-1378.14	1/2:855:0,584,269:0:0:584,269:20651,9406:-2343.72,-707.1,-531.299,-1636.65,0,-1555.67	1/2:3691:0,2494,1182:0:0:2494,1182:88917,41710:-10413.9,-3293.21,-2542.45,-7120.68,0,-6764.86	1/2:1614:0,1203,400:0:0:1203,400:42541,14188:-4387.26,-1083.71,-721.569,-3303.6,0,-3183.19	1/2:3572:0,2553,881:0:0:2553,881:90769,31022:-9539.01,-2336.38,-1567.85,-7202.66,0,-6937.45	1/2:1091:0,665,352:0:0:665,352:23767,12516:-2844.27,-942.802,-742.617,-1901.49,0,-1795.53	1/2:1223:0,946,270:0:0:946,270:33853,9519:-3427.52,-716.206,-431.431,-2711.33,0,-2630.06	1/2:14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chr04	28980390	.	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chr04	28980415	.	TCTTGT	TCTCAT,TCTACCTCAT,TCTCAG	888409	PASS	AB=0.817209,0.170916,0.00894454;ABP=29489.6,31698.3,56202;AC=117,63,8;AF=0.62234,0.335106,0.0425532;AN=188;AO=38698,6681,313;CIGAR=3M2X1M,1M4I2M2X1M,3M3X;DP=45933;DPB=50417.2;DPRA=0,31.5069,2.10875;EPP=84034.6,14510.6,682.681;EPPR=7.35324;GTI=10;LEN=2,10,3;MEANALT=4.8617,4.96703,5.18667;MQM=54.4158,43.269,37.0479;MQMR=60;NS=94;NUMALT=3;ODDS=1509.52;PAIRED=0,0,0;PAIREDR=0;PAO=0,0,0;PQA=0,0,0;PQR=0;PRO=0;QA=1374638,235202,11115;QR=72;RO=2;RPL=38698,6681,313;RPP=84034.6,14510.6,682.681;RPPR=7.35324;RPR=0,0,0;RUN=1,1,1;SAF=0,0,0;SAP=84034.6,14510.6,682.681;SAR=38698,6681,313;SRF=0;SRP=7.35324;SRR=2;TYPE=mnp,complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:120:0,100,20,0:0:0:100,20,0:3560,702,0:-344.569,-55.2815,-25.1785,-289.629,0,-283.609,-344.569,-55.2815,-289.629,-344.569	1/2:461:0,323,138,0:0:0:323,138,0:11487,4803,0:-1303.32,-374.797,-277.564,-928.866,0,-887.324,-1303.32,-374.797,-928.866,-1303.32	1/2:330:0,251,70,5:0:0:251,70,5:8804,2440,178:-901.69,-191.338,-115.779,-710.358,0,-689.286,-888.071,-177.718,-696.739,-886.566	1/2:894:0,748,134,6:0:0:748,134,6:26442,4741,216:-2523.5,-379.83,-154.659,-2143.7,0,-2103.36,-2507.24,-363.567,-2127.44,-2505.43	1/2:393:0,338,52,1:0:0:338,52,1:12000,1844,36:-1119.27,-146.964,-45.216,-972.344,0,-956.69,-1116.56,-144.254,-969.633,-1116.26	1/1:466:0,414,38,9:0:0:414,38,9:14709,1325,324:-1317.54,-124.626,0,-1214.08,-21.1716,-1202.65,-1292.89,-99.9756,-1189.43,-1290.18	1/2:824:0,739,80,2:0:0:739,80,2:26240,2819,72:-2359.62,-225.926,-3.46446,-2133.72,0,-2109.64,-2354.2,-220.505,-2128.3,-2353.6	1/1:696:0,627,61,2:0:0:627,61,2:22212,2133,72:-1990.76,-188.746,0,-1824.6,-22.58,-1806.24,-1985.26,-183.25,-1819.11,-1984.66	1/2:622:0,455,159,3:0:0:455,159,3:16116,5579,106:-1741.56,-436.479,-299.511,-1305.09,0,-1257.23,-1733.5,-428.416,-1297.03,-1732.59	1/2:414:0,315,96,0:0:0:315,96,0:11208,3396,0:-1180.43,-272.057,-177.233,-908.455,0,-879.557,-1180.43,-272.057,-908.455,-1180.43	1/1:309:0,272,25,9:0:0:272,25,9:9678,873,324:-869.706,-81.8802,0,-799.826,-11.991,-792.3,-845.312,-57.4874,-775.432,-842.603	1/1:515:0,469,43,2:0:0:469,43,2:16652,1493,72:-1490.78,-141.183,0,-1374.08,-24.4885,-1361.14,-1485.29,-135.687,-1368.59,-1484.69	1/2:513:0,423,85,2:0:0:423,85,2:15069,2996,72:-1453.4,-234.775,-107.439,-1218.64,0,-1193.05,-1447.91,-229.279,-1213.14,-1447.31	1/2:378:0,293,84,1:0:0:293,84,1:10408,2910,36:-1071.29,-230.243,-142.041,-841.05,0,-815.763,-1068.58,-227.532,-838.339,-1068.27	1/2:299:0,227,69,2:0:0:227,69,2:8044,2457,72:-846.909,-196.81,-128.476,-650.136,0,-629.365,-841.488,-191.389,-644.715,-840.886	1/1:421:0,380,34,7:0:0:380,34,7:13514,1186,250:-1210,-114.391,0,-1116.09,-20.4715,-1105.85,-1191.14,-95.5294,-1097.22,-1189.03	1/1:624:0,570,50,3:0:0:570,50,3:20270,1744,108:-1815.3,-171.587,0,-1678.88,-35.1598,-1663.83,-1807.05,-163.343,-1670.64,-1806.15	1/2:460:0,374,80,5:0:0:374,80,5:13349,2795,180:-1298.82,-218.34,-105.754,-1080.48,0,-1056.4,-1285.08,-204.601,-1066.74,-1283.58	1/2:207:0,183,20,1:0:0:183,20,1:6543,710,36:-586.816,-55.9256,-0.837144,-530.926,0,-524.905,-584.068,-53.1778,-528.178,-583.767	1/1:1071:0,995,67,3:0:0:995,67,3:35407,2390,108:-3180.71,-299.525,0,-2988.72,-107.5,-2968.56,-3172.58,-291.394,-2980.59,-3171.67	1/1:952:0,857,86,5:0:0:857,86,5:30325,3032,178:-2713.07,-257.983,0,-2472.44,-17.3394,-2446.55,-2699.59,-244.504,-2458.96,-2698.09	1/2:294:0,201,88,4:0:0:201,88,4:7128,3101,136:-824.872,-247.984,-187.477,-576.927,0,-550.436,-814.706,-237.819,-566.762,-813.502	1/2:237:0,165,70,1:0:0:165,70,1:5863,2475,36:-674.127,-198.723,-149.053,-475.409,0,-454.337,-671.416,-196.013,-472.698,-671.115	1/2:710:0,584,118,6:0:0:584,118,6:20745,4174,216:-2011.4,-332.357,-156.556,-1679.06,0,-1643.54,-1995.14,-316.095,-1662.8,-1993.33	1/2:565:0,474,89,2:0:0:474,89,2:16881,3132,72:-1615.37,-248.562,-105.874,-1366.82,0,-1340.03,-1609.95,-243.142,-1361.4,-1609.35	1/2:1526:0,1353,159,5:0:0:1353,159,5:48131,5621,180:-4363.09,-452.252,-44.958,-3910.87,0,-3863.01,-4349.75,-438.912,-3897.53,-4348.25	1/2:768:0,688,77,0:0:0:688,77,0:24526,2687,0:-2203.89,-213.158,-6.049,-1990.72,0,-1967.54,-2203.89,-213.158,-1990.72,-2203.89	1/2:213:0,187,23,2:0:0:187,23,2:6612,811,72:-600.326,-64.5547,-8.26212,-535.782,0,-528.858,-594.905,-59.1345,-530.361,-594.303	1/2:842:0,579,259,2:0:0:579,259,2:20622,9167,72:-2409.66,-737.219,-562.922,-1672.46,0,-1594.5,-2404.32,-731.882,-1667.13,-2403.72	1/1:565:0,512,51,0:0:0:512,51,0:18222,1810,0:-1632.34,-154.127,0,-1488.36,-10.1412,-1473,-1632.34,-154.127,-1488.36,-1632.34	1/2:492:0,435,51,0:0:0:435,51,0:15476,1804,0:-1402.12,-144.4,-13.4521,-1257.74,0,-1242.39,-1402.12,-144.4,-1257.74,-1402.12	1/3:27:0,12,7,8:0:0:12,7,8:408,245,286:-54.3735,-21.3666,-17.7543,-34.8607,-1.8499,-32.7535,-33.003,0,-13.4908,-30.5948	1/1:16:0,16,0,0:0:0:16,0,0:570,0,0:-51.4057,-4.81648,0,-51.4057,-4.81648,-51.4057,-51.4057,-4.81648,-51.4057,-51.4057	1/3:30:0,20,4,6:0:0:20,4,6:720,139,212:-74.5914,-16.1075,-10.0869,-63.8614,-5.37478,-62.6572,-58.4884,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chr04	28981449	.	CGC	TGG,CGG	447501	PASS	AB=0.496966,0.501161;ABP=5.14517,3.323;AC=101,87;AF=0.537234,0.462766;AN=188;AO=15072,14047;CIGAR=1X1M1X,2M1X;DP=29180;DPB=29181.7;DPRA=0,0;EPP=32731.4,30505.7;EPPR=0;GTI=3;LEN=3,1;MEANALT=2.53191,2.53191;MQM=44.4771,30.3335;MQMR=0;NS=94;NUMALT=2;ODDS=3.75596;PAIRED=0,0;PAIREDR=0;PAO=2.5,2.5;PQA=72,72;PQR=0;PRO=0;QA=513650,495767;QR=0;RO=0;RPL=0,0;RPP=32731.4,30505.7;RPPR=0;RPR=15072,14047;RUN=1,1;SAF=0,0;SAP=32731.4,30505.7;SAR=15072,14047;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:144:0,49,95:0:0:49,95:1642,3345:-329.622,-201.021,-186.271,-128.906,0,-100.309	1/2:173:0,91,82:0:0:91,82:3115,2893:-416.776,-175.277,-147.883,-241.797,0,-217.113	1/2:413:0,205,208:0:0:205,208:7011,7330:-1004.55,-454.509,-392.798,-550.349,0,-487.734	1/2:806:0,456,350:0:0:456,350:15409,12334:-1981.71,-767.125,-629.855,-1214.89,0,-1109.53	1/2:245:0,91,154:0:0:91,154:3137,5481:-584.765,-334.7,-307.306,-250.38,0,-204.022	1/2:257:0,131,124:0:0:131,124:4409,4390:-605.28,-264.33,-224.895,-340.968,0,-303.641	1/2:285:0,126,159:0:0:126,159:4256,5624:-681.528,-344.079,-306.149,-337.755,0,-289.891	1/2:370:0,152,216:0:0:152,216:5148,7583:-858.434,-455.364,-409.608,-403.079,0,-338.056	1/2:482:0,231,251:0:0:231,251:7964,8881:-1167.01,-544.86,-475.322,-622.46,0,-546.901	1/2:115:0,61,54:0:0:61,54:2079,1918:-283.524,-120.075,-101.712,-163.753,0,-147.497	1/2:95:0,62,33:0:0:62,33:2077,1165:-238.224,-74.7342,-56.0703,-163.789,0,-153.855	1/2:485:0,263,219:0:0:263,219:8965,7640:-1181.44,-482.291,-403.12,-699.162,0,-633.236	1/2:413:0,249,164:0:0:249,164:8451,5772:-1018.61,-357.244,-282.287,-661.663,0,-612.294	1/2:131:0,63,68:0:0:63,68:2206,2412:-323.396,-147.114,-128.15,-176.592,0,-156.122	1/2:174:0,88,85:0:0:88,85:3003,2997:-426.046,-187.226,-160.736,-238.856,0,-213.269	1/2:262:0,156,106:0:0:156,106:5321,3752:-655.841,-233.119,-186.158,-423.022,0,-391.113	1/2:146:0,88,58:0:0:88,58:3019,2034:-366.316,-126.831,-100.341,-239.785,0,-222.325	1/2:142:0,79,63:0:0:79,63:2707,2230:-351.421,-140.955,-117.174,-210.768,0,-191.803	1/2:121:0,96,25:0:0:96,25:3278,893:-312.755,-55.9573,-27.0584,-257.088,0,-249.563	1/2:508:0,245,263:0:0:245,263:8338,9299:-1239.27,-579.001,-505.248,-660.579,0,-581.408	1/2:663:0,374,286:0:0:374,286:12813,10145:-1659.44,-636.04,-523.455,-1023.41,0,-937.314	1/2:159:0,37,122:0:0:37,122:1264,4333:-344.437,-255.473,-244.335,-89.2564,0,-52.5308	1/2:195:0,106,89:0:0:106,89:3583,3135:-476.655,-193.594,-161.684,-283.361,0,-256.57	1/2:342:0,154,188:0:0:154,188:5193,6588:-811.139,-398.552,-352.193,-412.89,0,-356.296	1/2:469:0,158,311:0:0:158,311:5359,11039:-1091.15,-664.042,-616.479,-427.426,0,-333.805	1/2:431:0,82,347:0:0:82,347:2805,12263:-924.212,-725.829,-701.145,-198.466,0,-94.0082	1/2:585:0,307,275:0:0:307,275:10425,9707:-1437.91,-608.893,-516.477,-829.029,0,-746.246	1/2:70:0,39,31:0:0:39,31:1342,1095:-172.877,-66.646,-54.9058,-106.531,0,-97.199	1/2:333:0,66,265:0:0:66,265:2211,9396:-709.401,-549.586,-529.718,-159.852,0,-80.0792	1/2:183:0,83,100:0:0:83,100:2789,3566:-435.87,-216.056,-191.071,-220.117,0,-190.014	1/2:177:0,95,82:0:0:95,82:3218,2906:-431.985,-176.11,-147.513,-256.174,0,-231.49	1/1:335:0,327,4:0:0:327,4:11071,144:-968.197,-98.4368,0,-956.465,-86.6827,-955.261	1/2:114:0,92,22:0:0:92,22:3142,775:-295.4,-47.4454,-19.7506,-248.238,0,-241.615	1/1:145:0,131,13:0:0:131,13:4457,464:-386.023,-39.4349,0,-357.581,-10.9454,-353.668	1/1:567:0,551,16:0:0:551,16:18698,552:-1622.67,-165.868,0,-1587.33,-130.245,-1582.52	1/1:213:0,191,22:0:0:191,22:6516,779:-561.311,-57.4967,0,-511.881,-7.83608,-505.258	1/2:542:0,100,440:0:0:100,440:3392,15454:-1201.27,-957.751,-927.648,-243.531,0,-111.078	1/2:349:0,148,201:0:0:148,201:5091,7066:-843.623,-441.505,-396.952,-402.429,0,-341.922	1/2:127:0,92,33:0:0:92,33:3169,1150:-320.606,-76.0341,-48.3393,-244.596,0,-234.662	1/1:69:0,65,4:0:0:65,4:2223,144:-194.525,-19.567,0,-185.347,-10.0975,-184.143	1/2:274:0,159,115:0:0:159,115:5442,4078:-687.1,-253.252,-205.389,-434.15,0,-399.532	1/2:122:0,86,36:0:0:86,36:2944,1253:-311.848,-79.6071,-53.7185,-232.536,0,-221.699	1/2:416:0,205,208:0:0:205,208:6995,7374:-1004.72,-448.261,-386.55,-556.515,0,-493.901	1/2:120:0,73,47:0:0:73,47:2491,1646:-302.881,-106.997,-85.0216,-196.187,0,-182.039	1/2:294:0,166,128:0:0:166,128:5650,4497:-720.002,-270.137,-220.166,-450.162,0,-411.63	1/2:366:0,58,306:0:0:58,306:1957,10793:-765.987,-624.235,-606.776,-141.792,0,-49.677	1/2:297:0,133,164:0:0:133,164:4559,5773:-711.334,-356.938,-316.901,-354.702,0,-305.333	1/2:872:0,410,459:0:0:410,459:13982,16134:-2083.63,-977.073,-853.65,-1106.62,0,-968.445	1/2:329:0,164,164:0:0:164,164:5594,5792:-798.549,-357.603,-308.234,-441.049,0,-391.68	1/2:189:0,109,80:0:0:109,80:3718,2794:-465.025,-173.498,-140.685,-291.825,0,-267.743	2/2:631:0,64,563:0:0:64,563:2179,19995:-1347.78,-1192.17,-1172.91,-169.48,-13.8062,0	1/1:81:0,77,3:0:0:77,3:2629,108:-231.125,-23.1793,0,-224.88,-17,-223.977	1/2:653:0,321,331:0:0:321,331:10992,11724:-1582.93,-723.137,-626.506,-859.744,0,-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chr04	28981480	.	ATTT	AGTC,AG	845292	PASS	AB=0.669359,0.326684;ABP=9195.49,9630.05;AC=105,83;AF=0.558511,0.441489;AN=188;AO=28363,12179;CIGAR=1M1X1M1X,1M2D1X;DP=40703;DPB=34612;DPRA=0,0.886105;EPP=2761.93,25196.4;EPPR=48.6112;GTI=10;LEN=4,2;MEANALT=3.24468,3.24731;MQM=46.9208,26.7607;MQMR=60;NS=94;NUMALT=2;ODDS=15629.7;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=987922,435680;QR=749;RO=21;RPL=17183,12033;RPP=2761.93,25196.4;RPPR=48.6112;RPR=11180,146;RUN=1,1;SAF=0,0;SAP=61592.5,26449.4;SAR=28363,12179;SRF=0;SRP=48.6112;SRR=21;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:171:0,85,85:0:0:85,85:2909,3056:-406.07,-176.291,-150.703,-229.818,0,-204.23	1/2:190:0,115,74:0:0:115,74:4004,2635:-467.301,-153.085,-118.466,-314.285,0,-292.009	1/2:495:0,323,170:0:0:323,170:11265,6083:-1242.74,-352.578,-255.346,-890.117,0,-838.942	1/2:1056:0,760,295:0:0:760,295:26423,10530:-2704.04,-610.924,-382.141,-2093.12,0,-2004.32	1/2:306:1,169,136:1:36:169,136:5979,4872:-754.268,-279.469,-231.533,-472.104,0,-434.101	1/2:303:0,187,116:0:0:187,116:6462,4164:-744.856,-238.028,-181.735,-507.117,0,-472.198	1/2:361:0,218,142:0:0:218,142:7564,5091:-894.237,-294.401,-228.776,-599.902,0,-557.156	1/2:438:0,237,199:0:0:237,199:8229,7120:-1062.8,-411.517,-340.173,-651.23,0,-591.325	1/2:555:0,333,221:0:0:333,221:11565,7880:-1371.12,-457.452,-357.209,-913.683,0,-847.155	1/2:159:0,114,45:0:0:114,45:3950,1616:-404.975,-93.5978,-59.2804,-311.661,0,-298.115	1/2:126:1,96,25:1:36:96,25:3350,892:-315.627,-48.8191,-22.8608,-264.161,0,-259.573	1/2:601:0,418,181:0:0:418,181:14609,6508:-1530.41,-375.781,-249.951,-1154.62,0,-1100.14	1/2:521:1,379,139:1:36:379,139:13320,4992:-1340.01,-285.56,-174.408,-1051.79,0,-1012.88	1/2:170:0,111,59:0:0:111,59:3869,2115:-432.383,-122.672,-89.2577,-310.002,0,-292.241	1/2:243:0,172,70:0:0:172,70:6026,2512:-621.907,-145.055,-93.2775,-476.844,0,-455.772	1/2:325:0,235,89:0:0:235,89:8304,3200:-846.281,-183.943,-113.201,-662.337,0,-635.545	1/2:174:0,123,51:0:0:123,51:4327,1832:-450.892,-105.828,-68.8015,-345.351,0,-329.998	1/2:164:0,113,51:0:0:113,51:3972,1832:-417.165,-106.436,-72.4196,-311.017,0,-295.664	1/2:140:0,120,20:0:0:120,20:4242,716:-377.146,-41.8578,-5.73417,-335.564,0,-329.544	1/2:652:0,423,227:0:0:423,227:14699,8090:-1638.36,-468.624,-341.289,-1169.73,0,-1101.4	1/2:878:0,637,239:0:0:637,239:22167,8563:-2265.6,-494.595,-302.839,-1771.03,0,-1699.08	1/2:298:0,194,104:0:0:194,104:6756,3736:-739.584,-207.886,-149.486,-531.982,0,-500.675	1/2:241:0,163,77:0:0:163,77:5607,2752:-605.127,-159.956,-110.888,-445.249,0,-422.07	1/2:421:4,243,173:4:144:243,173:8421,6200:-1014.24,-347.213,-285.814,-656.422,0,-616.094	1/2:570:0,278,291:0:0:278,291:9668,10422:-1372.6,-603.039,-519.353,-769.632,0,-682.032	1/2:869:0,560,307:0:0:560,307:19482,10968:-2153.89,-611.894,-443.318,-1541.97,0,-1449.55	1/2:795:0,560,226:0:0:560,226:19468,8112:-2016.67,-469.049,-300.472,-1547.62,0,-1479.59	1/2:91:0,64,27:0:0:64,27:2258,972:-235.702,-55.7359,-36.47,-180.253,0,-172.125	1/2:666:0,429,237:0:0:429,237:14861,8445:-1650.75,-472.353,-343.211,-1178.68,0,-1107.34	1/2:246:0,152,93:0:0:152,93:5235,3344:-606.616,-192.748,-146.991,-413.836,0,-385.84	1/2:229:0,154,74:0:0:154,74:5378,2637:-579.927,-153.139,-106.78,-426.758,0,-404.482	1/1:488:0,486,0:0:0:486,0:16855,0:-1478.4,-146.301,0,-1478.4,-146.301,-1478.4	1/2:158:0,138,20:0:0:138,20:4844,716:-424.987,-41.8578,-0.31563,-383.404,0,-377.383	1/1:213:0,201,11:0:0:201,11:6968,396:-609.064,-60.507,0,-586.158,-37.6843,-582.847	1/1:826:0,812,12:0:0:812,12:28100,428:-2455.58,-244.436,0,-2430.57,-219.402,-2426.96	1/1:285:0,266,17:0:0:266,17:9229,608:-800.53,-80.074,0,-765.521,-45.0416,-760.404	1/2:1444:1,1084,348:1:36:1084,348:37996,12438:-3729.49,-690.771,-367.392,-3036.05,0,-2934.23	1/2:454:0,284,170:0:0:284,170:9849,6075:-1132.55,-353.075,-267.583,-779.765,0,-728.59	1/2:154:0,131,23:0:0:131,23:4593,824:-407.018,-48.2644,-8.82946,-359.03,0,-352.106	1/1:108:0,105,3:0:0:105,3:3662,108:-321.023,-31.6082,0,-314.777,-25.0952,-313.873	1/2:375:0,279,96:0:0:279,96:9701,3440:-972.895,-198.893,-114.905,-774.286,0,-745.387	1/2:182:0,152,29:0:0:152,29:5371,1036:-486.518,-59.809,-14.0524,-426.662,0,-417.932	1/2:561:0,365,192:0:0:365,192:12713,6896:-1408.37,-397.872,-287.996,-1010.49,0,-952.69	1/2:148:0,113,35:0:0:113,35:3932,1237:-383.032,-71.9627,-37.9463,-311.349,0,-300.813	1/2:402:0,282,120:0:0:282,120:9845,4312:-1032.49,-247.633,-162.743,-785.144,0,-749.021	1/2:667:0,375,291:0:0:375,291:13022,10416:-1613.9,-580.86,-467.974,-1033.05,0,-945.455	1/2:361:0,218,141:0:0:218,141:7619,5055:-894.208,-293.16,-227.536,-600.996,0,-558.551	1/2:1101:0,675,423:0:0:675,423:23408,15082:-2729.01,-874.738,-671.543,-1854.31,0,-1726.98	1/2:441:0,295,141:0:0:295,141:10254,5016:-1102.55,-290.961,-202.157,-811.595,0,-769.149	1/2:268:0,198,70:0:0:198,70:6891,2489:-688.427,-144.561,-84.9566,-544.149,0,-523.077	1/2:1161:0,655,500:0:0:655,500:22731,17792:-2804.01,-995.19,-798.015,-1808.8,0,-1658.29	1/1:136:0,133,3:0:0:133,3:4598,108:-403.862,-40.037,0,-397.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chr04	28981487	.	ATTTTTTCG	ATATTTTCG,ATATTTTCA	610481	PASS	AB=0.596033,0.327949;ABP=2918.71,9361.81;AC=106,82;AF=0.56383,0.43617;AN=188;AO=25132,12079;CIGAR=2M1X6M,2M1X5M1X;DP=40328;DPB=39669.8;DPRA=0,0.888904;EPP=54576.5,26232.2;EPPR=68.1545;GTI=10;LEN=1,9;MEANALT=4.5,4.52688;MQM=48.2553,26.7644;MQMR=56.5;NS=94;NUMALT=2;ODDS=10006.8;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=895777,322800;QR=1035;RO=30;RPL=25132,12079;RPP=54576.5,26232.2;RPPR=68.1545;RPR=0,0;RUN=1,1;SAF=0,0;SAP=54576.5,26232.2;SAR=25132,12079;SRF=0;SRP=68.1545;SRR=30;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:169:0,72,84:0:0:72,84:2557,2258:-361.453,-155.192,-133.518,-206.253,0,-180.967	1/2:191:0,97,75:0:0:97,75:3458,2019:-416.377,-138.806,-109.606,-277.574,0,-254.997	1/2:494:0,285,170:0:0:285,170:10144,4567:-1128.88,-313.998,-228.204,-814.863,0,-763.688	1/2:1053:0,668,297:0:0:668,297:23718,7971:-2442.42,-548.297,-347.209,-1894.08,0,-1804.67	1/2:305:1,135,137:1:36:135,137:4826,3693:-639.351,-251.236,-213.535,-385.451,0,-347.148	1/2:299:0,159,114:0:0:159,114:5666,3029:-660.138,-207.586,-159.722,-452.538,0,-418.22	1/2:357:0,178,143:0:0:178,143:6354,3847:-775.029,-264.539,-210.956,-510.462,0,-467.415	1/2:434:0,204,201:0:0:204,201:7255,5391:-955.268,-370.439,-309.029,-584.824,0,-524.317	1/2:546:0,293,217:0:0:293,217:10442,5840:-1239.08,-401.72,-313.518,-837.347,0,-772.023	1/2:160:0,91,46:0:0:91,46:3225,1238:-342.658,-85.0622,-57.6685,-257.56,0,-243.713	1/2:124:1,96,25:1:36:96,25:3426,673:-317.119,-43.2785,-17.3212,-271.161,0,-266.573	1/2:596:0,370,181:0:0:370,181:13238,4880:-1399.87,-335.704,-224.323,-1064.16,0,-1009.67	1/2:514:1,332,136:1:36:332,136:11863,3657:-1202.78,-248.598,-151.594,-951.524,0,-913.521	1/2:171:0,104,60:0:0:104,60:3725,1614:-410.747,-110.878,-79.5712,-299.821,0,-281.759	1/2:239:0,137,70:0:0:137,70:4893,1883:-520.956,-129.399,-88.1579,-391.527,0,-370.455	1/2:321:1,213,89:1:36:213,89:7618,2391:-771.626,-161.302,-100.121,-607.636,0,-583.782	1/2:174:0,112,51:0:0:112,51:4021,1370:-418.621,-94.0942,-60.3789,-324.502,0,-309.15	1/2:158:0,96,49:0:0:96,49:3412,1324:-364.439,-91.1006,-62.2017,-273.318,0,-258.568	1/2:139:0,110,20:0:0:110,20:3927,540:-351.471,-37.1297,-4.01639,-314.318,0,-308.298	1/2:648:0,383,226:0:0:383,226:13634,6080:-1511.02,-418.126,-302.832,-1092.85,0,-1024.82	1/2:874:0,581,236:0:0:581,236:20771,6322:-2105.52,-434.537,-259.639,-1670.95,0,-1599.91	1/2:298:0,155,106:0:0:155,106:5523,2746:-633.042,-186.678,-140.018,-446.352,0,-414.443	1/2:237:0,153,76:0:0:153,76:5401,2038:-571.326,-140.254,-94.1969,-431.012,0,-408.134	1/2:418:4,219,171:4:140:219,171:7790,4589:-926.791,-304.355,-249.822,-612.216,0,-572.131	1/2:568:0,247,290:0:0:247,290:8793,7792:-1242.61,-535.717,-461.363,-706.871,0,-619.572	1/2:861:1,489,301:1:35:489,301:17482,7799:-1937.82,-527.355,-382.996,-1407.91,0,-1320.14	1/2:784:0,473,224:0:0:473,224:16892,6030:-1769.65,-414.805,-272.417,-1354.81,0,-1287.38	1/2:89:0,60,26:0:0:60,26:2149,693:-220.128,-47.4525,-29.3907,-172.65,0,-164.823	1/2:662:0,370,235:0:0:370,235:13263,6096:-1487.61,-414.622,-303.241,-1072.98,0,-1002.24	1/2:243:0,132,92:0:0:132,92:4652,2468:-540.02,-169.642,-129.906,-370.339,0,-342.644	1/2:228:0,134,75:0:0:134,75:4740,2013:-518.743,-138.556,-98.2182,-380.152,0,-357.575	1/1:482:0,453,0:0:0:453,0:15986,0:-1407.56,-136.367,0,-1407.56,-136.367,-1407.56	1/1:159:1,124,18:1:30:124,18:4436,486:-388.767,-35.0357,0,-355.628,-3.91431,-352.501	1/1:213:0,178,11:0:0:178,11:6327,297:-558.699,-53.5833,0,-538.261,-33.1612,-534.95	1/1:822:0,742,12:0:0:742,12:26422,325:-2332.72,-223.364,0,-2310.33,-200.981,-2306.71	1/1:281:0,236,16:0:0:236,16:8367,423:-734.9,-71.0431,0,-705.84,-42.0032,-701.024	1/2:1428:1,1005,341:1:33:1005,341:35998,8843:-3512.67,-598.283,-298.416,-2912,0,-2812.01	1/2:448:0,238,164:0:0:238,164:8487,4412:-984.557,-303.468,-231.823,-681.068,0,-631.699	1/2:152:0,114,23:0:0:114,23:4064,623:-366.427,-42.8824,-8.56501,-323.519,0,-316.595	1/1:107:0,95,3:0:0:95,3:3388,81:-298.621,-28.5979,0,-293.049,-23.0473,-292.146	1/2:371:0,245,96:0:0:245,96:8755,2578:-882.15,-177.339,-103.587,-704.776,0,-675.877	1/2:181:0,138,29:0:0:138,29:4936,778:-447.941,-53.3845,-11.8423,-394.513,0,-385.783	1/2:560:0,301,194:0:0:301,194:10753,5202:-1220.36,-357.597,-266.987,-862.733,0,-804.333	1/2:150:0,107,36:0:0:107,36:3785,967:-369.037,-66.3673,-34.1571,-302.609,0,-291.772	1/2:394:0,245,118:0:0:245,118:8751,3162:-920.589,-217.061,-143.309,-703.483,0,-667.962	1/2:655:1,319,286:1:30:319,286:11404,7425:-1425.69,-502.525,-408.895,-921.062,0,-837.365	1/2:359:0,192,140:0:0:192,140:6860,3781:-810.586,-260.227,-202.429,-550.356,0,-508.212	1/2:1091:0,594,414:0:0:594,414:21104,11127:-2451.55,-764.917,-586.106,-1686.6,0,-1561.97	1/2:438:0,259,140:0:0:259,140:9198,3757:-993.197,-258.406,-180.439,-734.752,0,-692.608	1/2:267:0,176,69:0:0:176,69:6240,1855:-625.171,-127.449,-74.4676,-497.685,0,-476.914	1/2:1150:0,605,492:0:0:605,492:21579,12756:-2608.63,-867.728,-685.605,-1740.9,0,-1592.79	1/1:135:0,118,3:0:0:118,3:4193,81:-371.706,-35.5215,0,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chr04	29190904	.	ACCAGTT	TCCGGTC,ACCGGTC	343704	PASS	AB=0.499548,0.479077;ABP=3.02602,36.631;AC=142,46;AF=0.755319,0.244681;AN=188;AO=11816,4255;CIGAR=1X2M1X2M1X,3M1X2M1X;DP=16407;DPB=16406.9;DPRA=0,1.52615;EPP=21382.9,7945.36;EPPR=0;GTI=0;LEN=7,7;MEANALT=4.14894,5.03509;MQM=59.9024,59.972;MQMR=0;NS=94;NUMALT=2;ODDS=8.41622;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=402903,143846;QR=0;RO=0;RPL=11301,4100;RPP=21382.9,7945.36;RPPR=0;RPR=515,155;RUN=1,1;SAF=0,0;SAP=25661.1,9242.63;SAR=11816,4255;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:55:0,20,34:0:0:20,34:698,1148:-149.864,-93.0854,-87.0648,-56.8297,0,-46.5947	1/1:185:0,182,0:0:0:182,0:6257,0:-562.977,-54.7875,0,-562.977,-54.7875,-562.977	1/1:105:0,104,0:0:0:104,0:3555,0:-319.845,-31.3071,0,-319.845,-31.3071,-319.845	1/1:139:0,137,0:0:0:137,0:4682,0:-421.272,-41.2411,0,-421.272,-41.2411,-421.272	1/2:48:0,27,18:0:0:27,18:930,613:-125.289,-49.7457,-41.6179,-75.5583,0,-70.1397	1/2:29:0,9,18:0:0:9,18:305,603:-73.5831,-48.8509,-46.1416,-24.7499,0,-19.3313	1/2:63:0,32,31:0:0:32,31:1084,1065:-174.714,-86.8239,-77.1909,-88.2313,0,-78.8993	1/2:146:0,79,64:0:0:79,64:2685,2206:-396.969,-179.249,-155.467,-217.769,0,-198.503	1/1:88:0,86,0:0:0:86,0:2920,0:-262.756,-25.8886,0,-262.756,-25.8886,-262.756	1/1:69:0,66,0:0:0:66,0:2260,0:-203.345,-19.868,0,-203.345,-19.868,-203.345	1/2:176:0,93,78:0:0:93,78:3170,2600:-467.701,-210.498,-182.502,-257.263,0,-233.782	1/2:37:0,13,24:0:0:13,24:459,835:-105.622,-68.2423,-64.3289,-37.7308,0,-30.5061	1/1:45:0,44,0:0:0:44,0:1503,0:-135.242,-13.2453,0,-135.242,-13.2453,-135.242	1/1:39:0,36,0:0:0:36,0:1237,0:-111.27,-10.8371,0,-111.27,-10.8371,-111.27	1/1:36:0,35,0:0:0:35,0:1179,0:-106.163,-10.5361,0,-106.163,-10.5361,-106.163	1/2:34:0,17,17:0:0:17,17:581,572:-93.8343,-46.6805,-41.563,-47.4928,0,-42.3753	1/2:30:0,19,11:0:0:19,11:647,367:-82.5327,-30.0394,-24.3198,-52.8293,0,-49.518	1/1:30:0,30,0:0:0:30,0:1063,0:-95.9824,-9.0309,0,-95.9824,-9.0309,-95.9824	1/2:108:0,54,51:0:0:54,51:1839,1711:-287.777,-138.582,-122.326,-149.197,0,-133.844	1/2:156:0,67,88:0:0:67,88:2275,2957:-424.092,-239.585,-219.416,-184.555,0,-158.064	1/2:132:0,50,79:0:0:50,79:1692,2708:-357.066,-219.91,-204.859,-137.217,0,-113.436	1/1:130:0,125,0:0:0:125,0:4277,0:-384.799,-37.6288,0,-384.799,-37.6288,-384.799	1/1:113:0,108,2:0:0:108,2:3661,68:-329.369,-32.5112,0,-323.853,-26.9955,-323.251	1/2:106:0,88,14:0:0:88,14:3029,487:-285.645,-39.6272,-13.1366,-246.046,0,-241.832	1/1:105:0,102,0:0:0:102,0:3472,0:-312.369,-30.7051,0,-312.369,-30.7051,-312.369	1/2:346:0,205,136:0:0:205,136:7011,4598:-941.739,-372.732,-311.02,-569.015,0,-528.075	1/2:141:0,81,54:0:0:81,54:2767,1814:-371.547,-146.987,-122.604,-224.599,0,-208.344	1/2:14:0,5,9:0:0:5,9:173,322:-40.6691,-26.615,-25.1099,-14.4042,0,-11.6949	1/1:133:0,131,0:0:0:131,0:4472,0:-402.377,-39.4349,0,-402.377,-39.4349,-402.377	1/2:205:0,91,109:0:0:91,109:3080,3717:-551.303,-301.596,-274.202,-249.715,0,-216.902	1/2:102:0,50,47:0:0:50,47:1714,1600:-269.01,-129.854,-114.803,-139.212,0,-125.064	1/2:783:0,401,372:0:0:401,372:13651,12683:-2136.5,-1029.09,-908.381,-1107.45,0,-995.464	1/2:616:0,310,285:0:0:310,285:10551,9624:-1635.71,-779.789,-686.47,-855.936,0,-770.142	1/1:788:0,771,0:0:0:771,0:26249,0:-2361.5,-232.094,0,-2361.5,-232.094,-2361.5	1/2:1215:0,590,598:0:0:590,598:19974,20094:-3247.06,-1627.83,-1450.23,-1619.26,0,-1439.25	1/1:418:0,411,1:0:0:411,1:13932,35:-1253.46,-123.723,0,-1250.61,-120.866,-1250.31	1/1:116:0,114,0:0:0:114,0:3885,0:-349.56,-34.3174,0,-349.56,-34.3174,-349.56	1/2:225:0,106,116:0:0:106,116:3576,3928:-608.345,-318.527,-286.618,-289.871,0,-254.951	1/1:274:0,268,0:0:0:268,0:9173,0:-825.22,-80.676,0,-825.22,-80.676,-825.22	1/1:372:0,370,0:0:0:370,0:12654,0:-1138.44,-111.381,0,-1138.44,-111.381,-1138.44	1/1:128:0,124,2:0:0:124,2:4267,72:-383.867,-37.3277,0,-377.992,-31.4504,-377.39	1/2:98:0,44,53:0:0:44,53:1515,1801:-269.175,-146.123,-132.878,-123.103,0,-107.148	1/2:187:0,106,74:0:0:106,74:3584,2498:-492.971,-202.469,-170.559,-290.508,0,-268.232	1/2:48:0,23,25:0:0:23,25:790,862:-134.517,-70.3685,-63.4448,-64.4926,0,-56.9669	1/1:33:0,33,0:0:0:33,0:1120,0:-101.102,-9.93399,0,-101.102,-9.93399,-101.102	1/1:101:0,100,0:0:0:100,0:3466,0:-311.812,-30.103,0,-311.812,-30.103,-311.812	1/1:123:0,116,0:0:0:116,0:3952,0:-355.569,-34.9195,0,-355.569,-34.9195,-355.569	1/2:165:0,74,89:0:0:74,89:2544,2984:-448.324,-241.726,-219.449,-206.657,0,-179.865	1/2:97:0,53,44:0:0:53,44:1824,1486:-268.93,-120.784,-104.829,-148.487,0,-135.241	1/1:77:0,77,0:0:0:77,0:2665,0:-240.093,-23.1793,0,-240.093,-23.1793,-240.093	1/2:136:0,52,81:0:0:52,81:1794,2774:-370.967,-225.224,-209.57,-145.788,0,-121.404	1/2:561:0,291,259:0:0:291,259:9956,8778:-1519.89,-711.784,-624.184,-808.131,0,-730.165	1/1:140:0,140,0:0:0:140,0:4806,0:-432.718,-42.1442,0,-432.718,-42.1442,-432.718	1/2:18:0,12,6:0:0:12,6:421,200:-50.7939,-16.5202,-12.9078,-34.6127,0,-32.8066	1/1:667:0,649,0:0:0:649,0:22086,0:-1987.03,-195.368,0,-1987.03,-195.368,-1987.03	1/1:101:0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chr04	29383651	.	A	G	101700	PASS	AB=0.499086;ABP=3.0341;AC=140;AF=0.744681;AN=188;AO=4901;CIGAR=1X;DP=6571;DPB=6571;DPRA=10.0829;EPP=10645.4;EPPR=3625.03;GTI=1;LEN=1;MEANALT=1.02151;MQM=59.99;MQMR=60;NS=94;NUMALT=1;ODDS=0.144291;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=173913;QR=58766;RO=1668;RPL=0;RPP=10645.4;RPPR=3625.03;RPR=4901;RUN=1;SAF=0;SAP=10645.4;SAR=4901;SRF=0;SRP=3625.03;SRR=1668;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:20,42:20:708:42:1500:-116.631,0,-45.3817	1/1:57:0,57:0:0:57:2040:-183.872,-17.1587,0	1/1:122:0,122:0:0:122:4348:-391.497,-36.7257,0	1/1:143:0,143:0:0:143:5087:-457.974,-43.0473,0	0/1:46:16,30:16:576:30:1076:-83.3055,0,-38.3276	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/1:110:58,52:58:2063:52:1864:-134.926,0,-152.827	0/1:95:45,50:45:1600:50:1784:-132.245,0,-115.692	1/1:87:1,86:1:36:86:3076:-273.47,-22.5913,0	1/1:50:0,50:0:0:50:1780:-160.483,-15.0515,0	0/1:34:22,12:22:776:12:424:-28.2614,0,-59.9271	0/1:63:44,19:44:1552:19:672:-41.8419,0,-121.007	1/1:27:0,27:0:0:27:952:-85.9952,-8.12781,0	1/1:19:0,19:0:0:19:667:-60.3546,-5.71957,0	1/1:20:0,20:0:0:20:693:-62.6896,-6.0206,0	0/1:32:24,8:24:851:8:288:-16.6344,0,-67.2765	0/1:22:16,6:16:568:6:212:-12.8021,0,-44.8292	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	0/1:20:17,3:17:608:3:104:-3.68221,0,-49.0314	0/1:181:85,96:85:2993:96:3444:-255.686,0,-215.117	0/1:94:55,39:55:1955:39:1360:-94.3987,0,-147.928	1/1:137:0,137:0:0:137:4878:-439.174,-41.2411,0	1/1:66:0,66:0:0:66:2350:-211.758,-19.868,0	0/1:74:12,62:12:419:62:2219:-177.698,0,-15.7665	1/1:99:0,99:0:0:99:3530:-317.909,-29.802,0	0/1:230:112,118:112:3928:118:4153:-304.719,0,-284.481	0/1:245:117,128:117:4111:128:4566:-337.354,0,-296.425	0/0:14:13,1:13:455:1:36:0,-0.616145,-37.6837	1/1:197:0,197:0:0:197:6962:-626.649,-59.3029,0	0/1:66:31,35:31:1078:35:1237:-91.7643,0,-77.4589	0/1:94:42,52:42:1461:52:1853:-138.751,0,-103.485	0/1:10:5,5:5:172:5:180:-13.5418,0,-12.8077	0/1:18:7,11:7:252:11:396:-30.5642,0,-17.6104	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	0/1:29:9,20:9:312:20:716:-56.0378,0,-19.6855	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	1/1:60:0,60:0:0:60:2130:-191.967,-18.0618,0	0/1:93:37,56:37:1307:56:1986:-151.017,0,-89.9349	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	1/1:102:0,102:0:0:102:3608:-324.927,-30.7051,0	0/1:29:20,9:20:695:9:316:-20.049,0,-54.1415	0/1:127:52,75:52:1814:75:2663:-201.686,0,-125.309	0/1:23:18,5:18:623:5:171:-8.80176,0,-49.4694	1/1:23:0,23:0:0:23:779:-70.4208,-6.92369,0	1/1:156:0,155:0:0:155:5487:-493.639,-46.6597,0	1/1:129:0,129:0:0:129:4596:-413.807,-38.8329,0	0/1:141:64,77:64:2249:77:2725:-203.048,0,-160.227	0/1:87:32,55:32:1139:55:1944:-149.044,0,-76.6288	1/1:80:0,80:0:0:80:2856:-257.278,-24.0824,0	0/1:139:79,60:79:2798:60:2134:-150.484,0,-210.217	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	1/1:122:0,122:0:0:122:4376:-394.013,-36.7257,0	0/1:19:9,10:9:315:10:342:-25.3895,0,-22.9677	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:99:0,99:0:0:99:3504:-315.571,-29.802,0	0/1:48:15,33:15:525:33:1184:-92.4189,0,-33.1286	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:22:12,10:12:414:10:347:-24.941,0,-30.9663	0/1:51:28,23:28:969:23:828:-59.4916,0,-72.1668	1/1:46:1,45:1:36:45:1587:-139.519,-10.2491,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:168:99,69:99:3490:69:2453:-170.45,0,-263.741	0/1:137:59,78:59:2059:78:2777:-208.929,0,-144.338	1/1:48:0,48:0:0:48:1693:-152.654,-14.4494,0	1/1:78:0,78:0:0:78:2746:-247.384,-23.4803,0	1/1:148:0,148:0:0:148:5224:-470.301,-44.5524,0	1/1:103:0,103:0:0:103:3631:-326.997,-31.0061,0	1/1:16:0,16:0:0:16:567:-51.3578,-4.81648,0	1/1:49:0,49:0:0:49:1752:-157.964,-14.7505,0	0/1:46:33,13:33:1128:13:449:-26.8901,0,-87.9741	0/1:27:19,8:19:680:8:284:-17.7755,0,-53.4014	0/1:119:52,67:52:1864:67:2396:-180.075,0,-132.217	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	1/1:123:0,123:0:0:123:4365:-392.536,-37.0267,0	1/1:128:0,128:0:0:128:4502:-405.35,-38.5318,0	0/1:104:38,66:38:1340:66:2348:-180.273,0,-89.5929	1/1:79:0,79:0:0:79:2828:-254.759,-23.7814,0	0/1:25:16,9:16:560:9:324:-21.9801,0,-43.203	0/1:77:39,38:39:1396:38:1337:-97.4486,0,-102.76	0/1:91:44,47:44:1564:47:1664:-122.654,0,-113.658	1/1:213:1,211:1:36:211:7451:-667.061,-60.56,0	1/1:33:0,33:0:0:33:1162:-104.885,-9.93399,0	1/1:30:0,30:0:0:30:1063:-95.9808,-9.0309,0	0/1:20:13,7:13:452:7:252:-17.0084,0,-34.9905	0/1:58:46,12:46:1643:12:423:-20.9453,0,-130.698	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:19:0,19:0:0:19:648:-58.6371,-5.71957,0	0/1:58:46,12:46:1605:12:415:-20.2205,0,-127.277	0/1:40:33,7:33:1163:7:252:-10.9878,0,-92.9349	1/1:145:0,145:0:0:145:5119:-460.855,-43.6494,0	1/1:27:0,27:0:0:27:950:-85.8134,-8.12781,0
chr04	29416308	.	A	G	157841	PASS	AB=0.593874;ABP=350.362;AC=143;AF=0.760638;AN=188;AO=7885;CIGAR=1X;DP=9749;DPB=9749;DPRA=0;EPP=17125.1;EPPR=3917.05;GTI=0;LEN=1;MEANALT=1.02128;MQM=40.6014;MQMR=59.9055;NS=94;NUMALT=1;ODDS=3.06498;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=282567;QR=66747;RO=1862;RPL=0;RPP=17125.1;RPPR=3977.1;RPR=7885;RUN=1;SAF=7885;SAP=17125.1;SAR=0;SRF=1855;SRP=3985.72;SRR=7;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:8,15:8:273:15:536:-37.769,0,-17.9765	1/1:126:0,126:0:0:126:4501:-381.196,-37.9298,0	1/1:121:0,121:0:0:121:4336:-364.875,-36.4246,0	1/1:270:0,270:0:0:270:9679:-844.57,-81.2781,0	0/1:61:22,39:22:792:39:1392:-100.604,0,-53.2428	0/1:66:22,44:22:792:44:1580:-113.097,0,-51.7377	0/1:163:58,105:58:2084:105:3772:-280.779,0,-138.758	0/1:108:40,68:40:1440:68:2440:-173.24,0,-97.3865	1/1:101:0,101:0:0:101:3617:-303.225,-30.404,0	1/1:105:0,105:0:0:105:3753:-327.851,-31.6082,0	0/1:53:34,19:34:1224:19:684:-44.1876,0,-94.4987	0/1:84:47,37:47:1692:37:1328:-86.8539,0,-127.276	1/1:61:0,61:0:0:61:2194:-184.056,-18.3628,0	1/1:41:0,41:0:0:41:1472:-126.446,-12.3422,0	1/1:64:0,64:0:0:64:2304:-201.658,-19.2659,0	0/1:57:30,27:30:1072:27:972:-66.4213,0,-79.6337	0/1:60:28,32:28:989:32:1152:-79.6014,0,-71.2602	1/1:61:0,61:0:0:61:2192:-184.657,-18.3628,0	0/1:37:15,22:15:540:22:792:-55.1057,0,-37.798	0/1:274:109,164:109:3886:164:5866:-429.263,0,-267.4	0/1:121:52,69:52:1860:69:2438:-173.309,0,-131.255	1/1:183:0,183:0:0:183:6548:-576.561,-55.0885,0	1/1:87:0,87:0:0:87:3130:-273.196,-26.1896,0	1/1:148:5,143:5:180:143:5125:-423.256,-28.0004,0	1/1:68:0,68:0:0:68:2424:-208.523,-20.47,0	0/1:337:117,220:117:4212:220:7888:-593.252,0,-277.766	0/1:195:53,142:53:1908:142:5077:-377.911,0,-113.294	0/1:42:25,17:25:885:17:612:-40.1956,0,-67.3233	1/1:328:0,328:0:0:328:11767:-1035.63,-98.7378,0	0/1:137:43,94:43:1533:94:3363:-248.319,0,-96.9635	0/1:132:54,78:54:1944:78:2797:-202.638,0,-135.5	0/1:23:11,12:11:396:12:432:-30.7303,0,-29.0138	0/1:22:6,16:6:216:16:572:-43.179,0,-13.1679	1/1:9:0,9:0:0:9:320:-27.2783,-2.70927,0	0/1:30:19,11:19:684:11:381:-23.6668,0,-52.8594	1/1:27:0,27:0:0:27:972:-81.4801,-8.12781,0	1/1:198:0,198:0:0:198:7085:-621.661,-59.6039,0	0/1:151:36,115:36:1296:115:4126:-309.477,0,-71.4884	1/1:46:0,46:0:0:46:1652:-139.342,-13.8474,0	1/1:11:0,11:0:0:11:381:-33.3087,-3.31133,0	1/1:170:5,165:5:180:165:5909:-491.939,-34.623,0	0/1:50:23,27:23:828:27:972:-68.5285,0,-59.7926	0/1:102:29,73:29:1029:73:2624:-194.43,0,-62.1985	0/1:68:31,37:31:1116:37:1328:-95.5374,0,-80.2817	1/1:72:0,72:0:0:72:2584:-225.729,-21.6742,0	1/1:146:0,146:0:0:146:5198:-456.341,-43.9504,0	1/1:129:0,129:0:0:129:4636:-390.737,-38.8329,0	0/1:177:63,114:63:2264:114:4084:-302.823,0,-150.74	0/1:102:41,61:41:1476:61:2196:-161.168,0,-102.431	1/1:122:0,122:0:0:122:4375:-380.457,-36.7257,0	0/1:202:77,125:77:2734:125:4472:-334.497,0,-185.492	0/1:19:12,7:12:432:7:252:-16.288,0,-33.5016	1/1:183:0,183:0:0:183:6580:-554.502,-55.0885,0	0/1:50:28,22:28:1008:22:792:-55.1029,0,-75.9849	1/1:29:0,29:0:0:29:1044:-87.2574,-8.72987,0	1/1:140:0,139:0:0:139:4992:-429.115,-41.8432,0	0/1:71:21,50:21:756:50:1766:-132.395,0,-46.9932	1/1:13:0,13:0:0:13:464:-41.397,-3.91339,0	0/1:53:21,32:21:748:32:1148:-85.4769,0,-51.6907	0/1:77:30,47:30:1080:47:1688:-122.356,0,-74.3233	1/1:91:1,90:1:36:90:3232:-277.473,-23.7955,0	1/1:14:0,14:0:0:14:504:-44.4405,-4.21442,0	0/1:193:67,126:67:2412:126:4517:-340.578,0,-159.231	0/1:179:80,99:80:2865:99:3560:-256.014,0,-204.092	1/1:92:2,90:2:72:90:3224:-271.22,-20.858,0	1/1:111:0,111:0:0:111:3988:-347.995,-33.4143,0	1/1:196:3,193:3:108:193:6896:-591.297,-48.9291,0	1/1:109:1,108:1:36:108:3869:-333.346,-29.214,0	1/1:22:0,22:0:0:22:777:-67.1525,-6.62266,0	1/1:102:0,102:0:0:102:3649:-304.653,-30.7051,0	0/1:60:33,27:33:1184:27:972:-67.004,0,-88.8056	0/1:19:8,11:8:288:11:392:-28.9304,0,-20.5478	0/1:184:63,121:63:2256:121:4343:-307.709,0,-147.91	1/1:62:0,62:0:0:62:2232:-189.367,-18.6639,0	1/1:168:0,168:0:0:168:5988:-515.305,-50.573,0	1/1:201:0,201:0:0:201:7211:-630.717,-60.507,0	0/1:78:35,43:35:1252:43:1540:-107.444,0,-89.5047	1/1:86:0,86:0:0:86:3069:-260.601,-25.8886,0	0/1:27:19,8:19:680:8:284:-16.3417,0,-53.4014	0/1:125:56,69:56:2016:69:2472:-175.981,0,-144.084	0/1:126:49,77:49:1756:77:2764:-194.862,0,-120.372	1/1:345:2,343:2:72:343:12327:-1066.46,-97.0186,0	1/1:96:0,96:0:0:96:3448:-300.482,-28.8989,0	1/1:46:0,46:0:0:46:1656:-143.849,-13.8474,0	0/1:76:45,31:45:1616:31:1116:-74.5248,0,-122.852	0/1:147:70,77:70:2520:77:2768:-197.844,0,-182.786	1/1:48:0,48:0:0:48:1720:-141.98,-14.4494,0	1/1:68:0,68:0:0:68:2444:-204.33,-20.47,0	1/1:50:0,50:0:0:50:1783:-150.869,-15.0515,0	1/1:24:0,24:0:0:24:864:-74.4648,-7.22472,0	0/1:106:67,39:67:2396:39:1404:-88.7997,0,-183.985	0/1:71:45,26:45:1597:26:936:-60.9403,0,-122.644	1/1:118:1,117:1:36:117:4166:-357.514,-31.9259,0	1/1:103:0,103:0:0:103:3696:-321.292,-31.0061,0
chr04	29416322	.	GG	GAAA,GA	201222	PASS	AB=0.594967,0.403939;ABP=361.006,369.302;AC=143,45;AF=0.760638,0.239362;AN=188;AO=7967,1872;CIGAR=1M2I1X,1M1X;DP=9855;DPB=17828;DPRA=0,1.3117;EPP=17303.1,3998.82;EPPR=5.18177;GTI=0;LEN=4,1;MEANALT=1.74468,2.125;MQM=40.5867,59.7511;MQMR=60;NS=94;NUMALT=2;ODDS=1.73516;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=282922,66980;QR=36;RO=1;RPL=7967,1871;RPP=17303.1,4059.33;RPPR=5.18177;RPR=0,1;RUN=1,1;SAF=7967,1865;SAP=17303.1,4007.43;SAR=0,7;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:22:0,15,7:0:0:15,7:538,252:-60.8864,-20.9217,-16.4063,-40.3148,0,-38.2076	1/1:127:0,127,0:0:0:127,0:4513,0:-382.132,-38.2308,0,-382.132,-38.2308,-382.132	1/1:121:0,121,0:0:0:121,0:4289,0:-361.527,-36.4246,0,-361.527,-36.4246,-361.527	1/1:273:0,272,0:0:0:272,0:9678,0:-844.775,-81.8802,0,-844.775,-81.8802,-844.775	1/2:61:0,39,22:0:0:39,22:1391,788:-171.397,-64.6221,-52.882,-107.126,0,-100.503	1/2:67:0,45,22:0:0:45,22:1595,784:-185.052,-64.2613,-50.7149,-121.139,0,-114.516	1/2:162:0,105,57:0:0:105,57:3757,2040:-463.514,-166.709,-135.101,-297.16,0,-280.001	1/2:112:0,72,40:0:0:72,40:2575,1436:-312.102,-117.496,-95.8223,-194.955,0,-182.914	1/1:101:0,101,0:0:0:101,0:3585,0:-301.618,-30.404,0,-301.618,-30.404,-301.618	1/1:106:0,106,0:0:0:106,0:3774,0:-329.93,-31.9092,0,-329.93,-31.9092,-329.93	1/2:53:0,19,34:0:0:19,34:680,1211:-152.847,-99.0467,-93.3272,-54.1514,0,-43.9164	1/2:85:0,38,47:0:0:38,47:1347,1683:-239.891,-137.607,-126.168,-102.628,0,-88.4798	1/1:62:0,61,0:0:0:61,0:2139,0:-180.639,-18.3628,0,-180.639,-18.3628,-180.639	1/1:42:0,42,0:0:0:42,0:1500,0:-128.847,-12.6433,0,-128.847,-12.6433,-128.847	1/1:65:0,65,0:0:0:65,0:2313,0:-202.057,-19.567,0,-202.057,-19.567,-202.057	1/2:57:0,26,31:0:0:26,31:909,1108:-161.009,-90.6244,-82.7976,-70.7288,0,-61.3969	1/2:61:0,32,29:0:0:32,29:1143,1040:-171.978,-84.8664,-75.2334,-87.4588,0,-78.729	1/1:61:0,61,0:0:0:61,0:2179,0:-183.975,-18.3628,0,-183.975,-18.3628,-183.975	1/2:37:0,22,15:0:0:22,15:778,540:-102.805,-44.4207,-37.798,-58.7314,0,-54.2159	1/2:274:0,161,112:0:0:161,112:5710,4010:-776.892,-326.857,-278.391,-450.112,0,-416.397	1/2:123:0,71,52:0:0:71,52:2520,1864:-347.684,-152.386,-131.013,-195.648,0,-179.995	1/1:188:0,185,2:0:0:185,2:6598,72:-580.18,-55.6906,0,-574.417,-49.8955,-573.814	1/1:87:0,87,0:0:0:87,0:3093,0:-270.685,-26.1896,0,-270.685,-26.1896,-270.685	1/1:151:0,145,6:0:0:145,6:5163,216:-443.284,-43.6494,0,-425.659,-25.665,-423.853	1/1:69:0,69,0:0:0:69,0:2449,0:-210.816,-20.7711,0,-210.816,-20.7711,-210.816	1/2:341:0,221,120:0:0:221,120:7808,4282:-970.517,-349.376,-282.848,-621.495,0,-585.371	1/2:194:0,144,50:0:0:144,50:5072,1800:-540.389,-147.228,-103.88,-393.515,0,-378.463	1/2:42:0,17,25:0:0:17,25:602,888:-119.335,-72.7133,-67.5958,-46.9669,0,-39.4412	1/1:335:0,333,2:0:0:333,2:11835,72:-1041.65,-100.243,0,-1035.88,-94.1264,-1035.28	1/2:136:0,94,42:0:0:94,42:3321,1496:-379.939,-122.235,-93.938,-258.054,0,-245.411	1/2:134:0,78,56:0:0:78,56:2748,2004:-378.474,-163.776,-140.296,-215.048,0,-198.19	1/2:24:0,13,11:0:0:13,11:460,392:-68.1329,-32.2635,-28.3501,-36.218,0,-32.9067	1/2:22:0,16,6:0:0:16,6:576,212:-62.5412,-17.6186,-12.8021,-45.2736,0,-43.4675	1/1:9:0,9,0:0:0:9,0:311,0:-26.6308,-2.70927,0,-26.6308,-2.70927,-26.6308	1/2:30:0,11,19:0:0:11,19:396,684:-86.3889,-56.1708,-52.8594,-30.5647,0,-24.8451	1/1:25:0,25,0:0:0:25,0:883,0:-75.2678,-7.52575,0,-75.2678,-7.52575,-75.2678	1/1:202:0,201,0:0:0:201,0:7133,0:-625.879,-60.507,0,-625.879,-60.507,-625.879	1/2:151:0,115,36:0:0:115,36:4079,1288:-421.628,-105.387,-70.7681,-316.595,0,-305.757	1/1:47:0,47,0:0:0:47,0:1665,0:-140.701,-14.1484,0,-140.701,-14.1484,-140.701	1/1:11:0,11,0:0:0:11,0:396,0:-34.5449,-3.31133,0,-34.5449,-3.31133,-34.5449	1/1:172:0,167,5:0:0:167,5:5969,180:-514.606,-50.272,0,-499.918,-35.2251,-498.413	1/2:51:0,27,24:0:0:27,24:960,864:-145.07,-70.8578,-62.73,-74.5624,0,-67.3377	1/2:104:0,74,30:0:0:74,30:2637,1080:-292.758,-88.4647,-66.1885,-204.648,0,-195.617	1/2:70:0,39,31:0:0:39,31:1377,1106:-198.858,-90.4951,-78.7549,-108.713,0,-99.3807	1/1:72:0,72,0:0:0:72,0:2565,0:-224.174,-21.6742,0,-224.174,-21.6742,-224.174	1/1:148:0,148,0:0:0:148,0:5281,0:-463.216,-44.5524,0,-463.216,-44.5524,-463.216	1/1:132:0,131,1:0:0:131,1:4647,36:-392.503,-39.4349,0,-389.565,-36.1377,-389.264	1/2:179:0,115,63:0:0:115,63:4116,2260:-508.204,-184.338,-149.72,-323.86,0,-304.895	1/2:102:0,62,40:0:0:62,40:2217,1432:-291.34,-117.136,-98.4725,-174.557,0,-162.516	1/1:124:0,124,0:0:0:124,0:4434,0:-385.85,-37.3277,0,-385.85,-37.3277,-385.85	1/2:201:0,124,77:0:0:124,77:4423,2760:-578.716,-225.434,-188.106,-353.637,0,-330.457	1/2:21:0,8,13:0:0:8,13:280,460:-59.5753,-37.822,-35.4137,-22.0959,0,-18.1825	1/1:184:0,184,0:0:0:184,0:6533,0:-551.883,-55.3895,0,-551.883,-55.3895,-551.883	1/2:49:0,21,27:0:0:21,27:756,968:-139.488,-78.9786,-72.657,-60.5337,0,-52.4059	1/1:29:0,29,0:0:0:29,0:1035,0:-86.6062,-8.72987,0,-86.6062,-8.72987,-86.6062	1/1:143:0,143,0:0:0:143,0:5093,0:-438.738,-43.0473,0,-438.738,-43.04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chr04	30049715	.	A	T	173374	PASS	AB=0.493934;ABP=4.66995;AC=142;AF=0.755319;AN=188;AO=8220;CIGAR=1X;DP=10868;DPB=10868;DPRA=0;EPP=17852.5;EPPR=5744.38;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.996;MQMR=59.9709;NS=94;NUMALT=1;ODDS=6.98563;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=293504;QR=93793;RO=2644;RPL=0;RPP=17852.5;RPPR=5744.38;RPR=8220;RUN=1;SAF=8220;SAP=17852.5;SAR=0;SRF=2644;SRP=5744.38;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:41,32:41:1441:32:1152:-82.015,0,-108	1/1:147:0,147:0:0:147:5225:-470.391,-44.2514,0	1/1:126:0,125:0:0:125:4454:-400.671,-37.6288,0	1/1:137:0,137:0:0:137:4890:-440.254,-41.2411,0	0/1:61:32,29:32:1118:29:1032:-74.8306,0,-82.5606	0/1:60:19,41:19:672:41:1468:-114.354,0,-42.745	0/1:135:65,70:65:2273:70:2516:-186.052,0,-164.193	0/1:182:95,87:95:3353:87:3097:-224.17,0,-246.973	1/1:112:0,112:0:0:112:4004:-360.55,-33.7154,0	1/1:101:0,101:0:0:101:3628:-326.724,-30.404,0	0/1:140:70,70:70:2516:70:2501:-183.198,0,-184.547	0/1:114:54,60:54:1924:60:2133:-157.919,0,-139.12	1/1:102:0,102:0:0:102:3664:-329.963,-30.7051,0	1/1:209:0,208:0:0:208:7397:-665.461,-62.6142,0	1/1:76:0,76:0:0:76:2704:-243.605,-22.8783,0	0/1:84:43,41:43:1540:41:1464:-106.77,0,-113.607	0/1:131:60,71:60:2148:71:2548:-190.135,0,-154.153	1/1:79:0,79:0:0:79:2832:-255.118,-23.7814,0	0/1:97:46,51:46:1640:51:1828:-135.601,0,-118.689	0/1:175:97,78:97:3449:78:2787:-198.391,0,-257.943	0/1:130:66,64:66:2310:64:2292:-167.407,0,-169.025	0/1:126:85,41:85:3032:41:1466:-94.3064,0,-235.181	1/1:41:0,41:0:0:41:1464:-132.056,-12.3422,0	1/1:121:1,120:1:36:120:4300:-383.578,-32.8264,0	1/1:100:0,100:0:0:100:3576:-322.048,-30.103,0	1/1:331:0,331:0:0:331:11847:-1066.09,-99.6409,0	0/1:224:106,118:106:3765:118:4220:-312.55,0,-271.62	0/1:59:27,32:27:964:32:1144:-85.5087,0,-69.3161	1/1:188:0,188:0:0:188:6704:-603.439,-56.5936,0	0/1:143:81,62:81:2873:62:2212:-156.298,0,-215.76	0/1:104:50,54:50:1776:54:1928:-142.49,0,-128.816	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/1:11:6,5:6:212:5:176:-12.8737,0,-16.1135	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	0/1:40:26,14:26:932:14:504:-33.6569,0,-72.1577	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:295:0,295:0:0:295:10548:-949.236,-88.8039,0	0/1:205:100,103:100:3568:103:3688:-270.654,0,-259.86	1/1:137:1,136:1:21:136:4850:-434.554,-39.1412,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:95:2,93:2:72:93:3304:-290.744,-21.7611,0	0/1:65:26,39:26:928:39:1400:-106.732,0,-64.2713	0/1:116:61,55:61:2152:55:1972:-142.835,0,-159.029	0/1:81:30,51:30:1061:51:1818:-139.5,0,-70.6372	1/1:81:0,81:0:0:81:2900:-261.236,-24.3834,0	1/1:140:0,140:0:0:140:4988:-449.071,-42.1442,0	1/1:122:0,122:0:0:122:4333:-390.147,-36.7257,0	0/1:156:65,91:65:2336:91:3260:-246.66,0,-163.539	0/1:123:62,61:62:2177:61:2184:-159.799,0,-159.163	0/1:142:70,72:70:2465:72:2580:-189.702,0,-179.358	0/1:281:163,118:163:5731:118:4224:-295.751,0,-431.325	0/1:17:12,5:12:428:5:180:-11.4346,0,-33.7413	1/1:196:1,195:1:36:195:6976:-624.304,-55.4036,0	0/1:53:30,23:30:1072:23:813:-57.5345,0,-80.8379	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	1/1:118:0,118:0:0:118:4220:-379.981,-35.5215,0	0/1:24:7,17:7:252:17:608:-47.8273,0,-15.8042	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:29:16,13:16:568:13:468:-33.7298,0,-42.722	0/1:100:54,46:54:1908:46:1644:-118.146,0,-141.895	1/1:207:1,206:1:32:206:7328:-656.374,-59.1139,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:146:56,90:56:1992:90:3202:-244.449,0,-135.604	0/1:296:145,151:145:5149:151:5375:-394.778,0,-374.45	1/1:112:5,107:5:180:107:3819:-327.356,-17.1633,0	1/1:56:0,56:0:0:56:1996:-179.914,-16.8577,0	1/1:134:2,132:2:72:132:4681:-414.614,-33.5013,0	1/1:189:3,186:3:108:186:6668:-590.121,-46.8195,0	1/1:63:0,63:0:0:63:2256:-203.303,-18.9649,0	1/1:82:0,82:0:0:82:2940:-264.834,-24.6845,0	0/1:125:61,64:61:2184:64:2286:-168.372,0,-159.197	0/1:24:15,9:15:532:9:324:-22.2811,0,-40.9884	0/1:174:82,92:82:2890:92:3277:-242.771,0,-207.956	1/1:95:0,95:0:0:95:3381:-304.505,-28.5979,0	1/1:276:1,275:1:21:275:9800:-879.853,-80.9843,0	1/1:102:0,102:0:0:102:3645:-328.255,-30.7051,0	0/1:128:72,56:72:2538:56:1989:-140.751,0,-190.137	1/1:114:1,113:1:36:113:4029:-359.2,-30.7191,0	0/1:18:6,12:6:216:12:428:-33.4403,0,-14.372	0/1:87:48,39:48:1716:39:1385:-98.7572,0,-128.536	0/1:75:33,42:33:1180:42:1504:-113.077,0,-83.9308	1/1:220:0,220:0:0:220:7834:-705.091,-66.2266,0	1/1:137:0,137:0:0:137:4889:-440.162,-41.2411,0	1/1:107:0,107:0:0:107:3828:-344.717,-32.2102,0	0/1:101:51,50:51:1824:50:1762:-128.458,0,-134.037	0/1:185:88,97:88:3096:97:3464:-256.282,0,-223.173	1/1:67:0,67:0:0:67:2366:-213.196,-20.169,0	1/1:119:0,119:0:0:119:4255:-383.129,-35.8226,0	1/1:110:0,110:0:0:110:3936:-354.432,-33.1133,0	1/1:153:0,153:0:0:153:5476:-492.968,-46.0576,0	0/1:256:133,123:133:4730:123:4397:-318.838,0,-348.795	0/1:86:62,24:62:2224:24:856:-51.4725,0,-174.536	1/1:82:0,82:0:0:82:2933:-264.191,-24.6845,0	1/1:126:0,126:0:0:126:4496:-404.81,-37.9298,0
chr04	30132679	.	GAATTAT	GAGTTAT,AAGTTAC	179087	PASS	AB=0.462032,0.529246;ABP=51.8188,31.9692;AC=142,46;AF=0.755319,0.244681;AN=188;AO=6083,2082;CIGAR=2M1X4M,1X1M1X3M1X;DP=8236;DPB=8236;DPRA=0,1.19694;EPP=12636.5,4334.95;EPPR=0;GTI=0;LEN=1,7;MEANALT=2.28723,2.81818;MQM=59.9821,59.4529;MQMR=0;NS=94;NUMALT=2;ODDS=1.61313;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=217710,72667;QR=0;RO=0;RPL=6016,2060;RPP=12636.5,4334.95;RPPR=0;RPR=67,22;RUN=1,1;SAF=0,0;SAP=13212.1,4524.02;SAR=6083,2082;SRF=0;SRP=0;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:61:0,29,31:0:0:29,31:1040,1085:-173.089,-88.2588,-79.5289,-84.8247,0,-75.4928	1/1:69:0,69,0:0:0:69,0:2464,0:-222.014,-20.7711,0,-222.014,-20.7711,-222.014	1/1:168:0,167,0:0:0:167,0:5979,0:-537.963,-50.272,0,-537.963,-50.272,-537.963	1/1:152:0,151,0:0:0:151,0:5432,0:-488.731,-45.4555,0,-488.731,-45.4555,-488.731	1/2:73:0,26,46:0:0:26,46:936,1620:-208.238,-131.862,-124.035,-76.3729,0,-62.5255	1/2:37:0,19,18:0:0:19,18:675,631:-106.689,-51.6842,-45.9647,-55.3574,0,-49.9388	1/2:41:0,20,20:0:0:20,20:720,706:-115.61,-56.8564,-50.8358,-58.7495,0,-52.7289	1/2:103:0,46,56:0:0:46,56:1648,1963:-294.121,-159.719,-145.872,-134.435,0,-117.577	1/1:118:0,116,0:0:0:116,0:4160,0:-374.222,-34.9195,0,-374.222,-34.9195,-374.222	1/1:76:0,76,0:0:0:76,0:2732,0:-246.122,-22.8783,0,-246.122,-22.8783,-246.122	1/2:38:0,21,17:0:0:21,17:756,583:-109.36,-47.6643,-41.3427,-62.0456,0,-56.9281	1/2:122:0,53,68:0:0:53,68:1892,2397:-349.431,-195.182,-179.227,-154.352,0,-133.882	1/1:77:0,76,0:0:0:76,0:2705,0:-243.333,-22.8783,0,-243.333,-22.8783,-243.333	1/1:37:0,37,0:0:0:37,0:1332,0:-120.182,-11.1381,0,-120.182,-11.1381,-120.182	1/1:58:0,57,0:0:0:57,0:2052,0:-184.641,-17.1587,0,-184.641,-17.1587,-184.641	1/2:51:0,28,23:0:0:28,23:1008,817:-149.162,-66.9112,-58.4823,-82.6075,0,-75.6838	1/2:30:0,16,13:0:0:16,13:575,457:-84.1042,-37.1914,-32.3749,-46.9084,0,-42.995	1/1:24:0,24,0:0:0:24,0:864,0:-78.0826,-7.22472,0,-78.0826,-7.22472,-78.0826	1/2:32:0,21,11:0:0:21,11:756,396:-94.351,-32.6652,-26.3436,-62.0456,0,-58.7343	1/2:171:0,90,80:0:0:90,80:3232,2803:-491.591,-227.937,-200.844,-263.649,0,-239.566	1/2:163:0,97,63:0:0:97,63:3488,2191:-462.707,-178.128,-148.928,-284.622,0,-265.657	1/2:171:0,61,109:0:0:61,109:2175,3795:-485.869,-308.569,-290.206,-177.294,0,-144.482	1/1:120:0,120,0:0:0:120,0:4282,0:-385.558,-36.1236,0,-385.558,-36.1236,-385.558	1/1:69:0,64,4:0:0:64,4:2291,137:-206.119,-19.2659,0,-194.999,-8.09503,-193.795	1/1:148:0,145,1:0:0:145,1:5166,36:-464.727,-43.6494,0,-461.79,-40.7086,-461.489	1/1:182:0,181,0:0:0:181,0:6456,0:-580.497,-54.4864,0,-580.497,-54.4864,-580.497	1/2:206:0,91,113:0:0:91,113:3260,3924:-584.816,-318.942,-291.548,-265.95,0,-231.934	1/2:45:0,30,14:0:0:30,14:1076,493:-127.876,-40.1088,-31.0779,-87.7641,0,-83.5496	1/1:221:0,213,3:0:0:213,3:7611,93:-684.706,-64.1194,0,-677.243,-56.6606,-676.339	1/2:117:0,58,58:0:0:58,58:2070,2025:-333.474,-164.715,-147.256,-168.771,0,-151.311	1/2:86:0,45,40:0:0:45,40:1597,1412:-245.083,-114.965,-101.418,-130.112,0,-118.071	1/2:8:0,3,5:0:0:3,5:108,171:-23.0098,-14.1906,-13.2875,-9.17208,0,-7.66693	1/2:18:0,8,10:0:0:8,10:284,351:-52.0594,-28.9173,-26.5091,-23.4951,0,-20.4848	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:10:0,1,9:0:0:1,9:36,312:-28.6264,-25.6876,-25.3866,-3.29724,0,-0.587975	1/1:11:0,11,0:0:0:11,0:392,0:-35.6201,-3.31133,0,-35.6201,-3.31133,-35.6201	1/1:227:0,227,0:0:0:227,0:8143,0:-732.883,-68.3338,0,-732.883,-68.3338,-732.883	1/2:136:0,73,63:0:0:73,63:2624,2175:-391.111,-177.031,-155.056,-214.432,0,-195.467	1/1:54:0,53,0:0:0:53,0:1904,0:-171.278,-15.9546,0,-171.278,-15.9546,-171.278	1/1:8:0,8,0:0:0:8,0:284,0:-25.9034,-2.40824,0,-25.9034,-2.40824,-25.9034	1/1:84:0,81,3:0:0:81,3:2903,106:-261.151,-24.3834,0,-252.519,-15.3974,-251.616	1/2:36:0,20,16:0:0:20,16:705,547:-102.125,-44.7188,-38.6982,-57.7522,0,-52.9357	1/2:227:0,92,131:0:0:92,131:3303,4576:-641.69,-372.251,-344.557,-269.472,0,-230.037	1/2:57:0,30,26:0:0:30,26:1072,903:-160.84,-73.4301,-64.3992,-87.4404,0,-79.6136	1/1:55:0,55,0:0:0:55,0:1963,0:-176.942,-16.5567,0,-176.942,-16.5567,-176.942	1/1:103:0,100,0:0:0:100,0:3588,0:-322.766,-30.103,0,-322.766,-30.103,-322.766	1/1:177:0,176,1:0:0:176,1:6280,36:-564.934,-52.9813,0,-561.996,-49.684,-561.695	1/2:168:0,70,96:0:0:70,96:2512,3318:-474.409,-269.504,-248.432,-204.917,0,-176.018	1/2:124:0,47,77:0:0:47,77:1675,2671:-353.737,-217.202,-203.053,-136.888,0,-113.709	1/2:101:0,43,57:0:0:43,57:1548,1978:-287.116,-160.801,-147.857,-126.358,0,-109.199	1/2:142:0,75,67:0:0:75,67:2692,2359:-411.984,-192.393,-169.815,-219.947,0,-199.778	1/2:9:0,5,4:0:0:5,4:172,136:-25.2097,-11.2365,-9.73138,-14.3128,0,-13.1087	1/1:137:0,136,0:0:0:136,0:4880,0:-439.021,-40.9401,0,-439.021,-40.9401,-439.021	1/2:32:0,20,12:0:0:20,12:716,412:-92.1952,-33.7967,-27.7761,-58.7471,0,-55.1348	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:149:0,147,0:0:0:147,0:5233,0:-470.827,-44.2514,0,-470.827,-44.2514,-470.827	1/2:52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chr04	30175350	.	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chr04	30237933	.	GATGT	AATGT,AATGC	186027	PASS	AB=0.513155,0.484291;ABP=8.89463,11.4017;AC=143,45;AF=0.760638,0.239362;AN=188;AO=6911,1912;CIGAR=1X4M,1X3M1X;DP=8851;DPB=9498.2;DPRA=0,1.15874;EPP=15010.1,4154.87;EPPR=5.18177;GTI=2;LEN=1,5;MEANALT=1.87234,2.26316;MQM=59.7696,58.7458;MQMR=60;NS=94;NUMALT=2;ODDS=0.88827;PAIRED=0,0;PAIREDR=0;PAO=1617.5,1618.5;PQA=44129.5,44165.5;PQR=0;PRO=0;QA=245193,65732;QR=36;RO=1;RPL=1,0;RPP=15001.4,4154.87;RPPR=5.18177;RPR=6910,1912;RUN=1,1;SAF=1,0;SAP=15001.4,4154.87;SAR=6910,1912;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:43:0,28,15:0:0:28,15:983,517:-120.911,-40.9918,-32.563,-78.9361,0,-74.4206	1/1:211:0,211,0:0:0:211,0:7513,0:-676.155,-63.5173,0,-676.155,-63.5173,-676.155	1/1:51:0,51,0:0:0:51,0:1798,0:-162.099,-15.3525,0,-162.099,-15.3525,-162.099	1/1:251:0,250,0:0:0:250,0:8878,0:-798.607,-75.2575,0,-798.607,-75.2575,-798.607	1/2:63:0,34,29:0:0:34,29:1208,985:-177.471,-79.0491,-68.8141,-97.6232,0,-88.8933	1/2:67:0,26,41:0:0:26,41:919,1428:-187.957,-113.142,-105.316,-71.9576,0,-59.6154	1/2:195:0,101,94:0:0:101,94:3589,3297:-556.606,-264.181,-233.777,-288.523,0,-260.226	1/2:178:0,90,88:0:0:90,88:3203,3015:-500.396,-239.378,-212.285,-255.8,0,-229.31	1/1:79:0,77,2:0:0:77,2:2731,70:-245.518,-23.1793,0,-239.823,-17.2242,-239.221	1/1:130:0,127,0:0:0:127,0:4488,0:-403.725,-38.2308,0,-403.725,-38.2308,-403.725	1/2:54:0,22,32:0:0:22,32:779,1097:-149.642,-86.2235,-79.6008,-60.7083,0,-51.0753	1/2:60:0,28,32:0:0:28,32:987,1093:-166.48,-86.1545,-77.7257,-77.9293,0,-68.2963	1/1:56:0,56,0:0:0:56,0:1999,0:-180.181,-16.8577,0,-180.181,-16.8577,-180.181	1/1:81:0,81,0:0:0:81,0:2829,0:-254.785,-24.3834,0,-254.785,-24.3834,-254.785	1/1:35:0,35,0:0:0:35,0:1242,0:-112.022,-10.5361,0,-112.022,-10.5361,-112.022	1/2:46:0,28,18:0:0:28,18:996,619:-129.381,-48.2884,-39.8595,-79.1491,0,-73.7305	1/2:78:0,44,34:0:0:44,34:1576,1172:-221.18,-92.7165,-79.4711,-126.039,0,-115.804	1/1:56:0,56,0:0:0:56,0:1948,0:-175.586,-16.8577,0,-175.586,-16.8577,-175.586	1/2:19:0,9,9:0:0:9,9:324,307:-49.4565,-23.1062,-20.3969,-24.6491,0,-21.9399	1/2:252:0,148,104:0:0:148,104:5294,3586:-717.89,-286.336,-241.784,-426.738,0,-395.431	1/2:102:0,47,53:0:0:47,53:1662,1772:-276.609,-141.273,-127.125,-133.243,0,-117.289	1/2:101:0,31,70:0:0:31,70:1107,2343:-274.723,-184.49,-175.158,-85.193,0,-64.1209	1/1:96:0,96,0:0:0:96,0:3403,0:-306.312,-28.8989,0,-306.312,-28.8989,-306.312	1/1:165:0,163,1:0:0:163,1:5772,36:-518.988,-49.0679,0,-516.051,-46.3712,-515.75	1/1:72:0,72,0:0:0:72,0:2562,0:-230.769,-21.6742,0,-230.769,-21.6742,-230.769	1/1:318:1,317,0:1:36:317,0:11238,0:-1007.34,-92.1293,0,-1007.64,-95.4265,-1010.58	1/2:128:0,55,73:0:0:55,73:1942,2563:-361.831,-203.717,-187.161,-153.536,0,-131.561	1/2:33:0,17,16:0:0:17,16:604,559:-93.9899,-44.8071,-39.6896,-48.5504,0,-43.7339	1/1:243:0,242,1:0:0:242,1:8580,36:-771.745,-72.8493,0,-768.809,-69.553,-768.508	1/2:167:0,89,78:0:0:89,78:3163,2682:-471.894,-214.172,-187.38,-254.238,0,-230.758	1/2:94:0,51,43:0:0:51,43:1784,1470:-261.499,-116.404,-101.051,-142.245,0,-129.301	1/2:5:0,3,2:0:0:3,2:108,71:-13.9925,-5.53827,-4.63518,-8.36977,0,-7.76771	1/2:22:0,13,9:0:0:13,9:464,318:-62.884,-25.1618,-21.2484,-37.0453,0,-34.336	1/1:8:0,8,0:0:0:8,0:275,0:-25.0835,-2.40824,0,-25.0835,-2.40824,-25.0835	1/2:5:0,3,2:0:0:3,2:108,70:-14.334,-5.7143,-4.81121,-8.73079,0,-8.12873	1/1:7:0,7,0:0:0:7,0:248,0:-22.6642,-2.10721,0,-22.6642,-2.10721,-22.6642	1/1:153:0,152,0:0:0:152,0:5378,0:-483.785,-45.7566,0,-483.785,-45.7566,-483.785	1/2:164:0,83,81:0:0:83,81:2956,2762:-461.841,-220.929,-195.943,-237.834,0,-213.451	1/1:52:0,52,0:0:0:52,0:1838,0:-165.698,-15.6536,0,-165.698,-15.6536,-165.698	1/1:5:0,5,0:0:0:5,0:176,0:-16.1834,-1.50515,0,-16.1834,-1.50515,-16.1834	1/1:194:0,192,2:0:0:192,2:6810,68:-612.461,-57.7978,0,-606.945,-52.0322,-606.343	1/2:21:0,11,10:0:0:11,10:392,348:-58.8156,-26.9577,-23.6463,-30.6148,0,-27.6045	1/2:134:0,63,71:0:0:63,71:2243,2430:-376.653,-193.888,-174.923,-179.526,0,-158.153	1/2:44:0,21,23:0:0:21,23:730,802:-122.274,-62.9798,-56.6582,-57.1196,0,-50.1959	1/1:41:0,41,0:0:0:41,0:1463,0:-131.892,-12.3422,0,-131.892,-12.3422,-131.892	1/1:65:0,65,0:0:0:65,0:2308,0:-207.978,-19.567,0,-207.978,-19.567,-207.978	1/1:175:0,173,2:0:0:173,2:6168,71:-554.866,-52.0782,0,-549.271,-46.1387,-548.669	1/2:160:0,91,69:0:0:91,69:3175,2385:-446.054,-187.892,-160.498,-252.316,0,-231.545	1/2:123:0,73,50:0:0:73,50:2581,1736:-349.616,-139.517,-117.542,-208.576,0,-193.524	1/2:87:0,46,41:0:0:46,41:1640,1400:-242.803,-109.175,-95.3272,-129.333,0,-116.991	1/2:177:0,86,90:0:0:86,90:3053,3131:-495.533,-246.872,-220.983,-241.367,0,-214.274	1/2:6:0,4,2:0:0:4,2:140,70:-16.6333,-5.56346,-4.35934,-11.0186,0,-10.4166	1/1:112:0,112,0:0:0:112,0:3994,0:-359.523,-33.7154,0,-359.523,-33.7154,-359.523	1/2:110:0,60,49:0:0:60,49:2125,1690:-308.368,-135.281,-117.219,-171.361,0,-156.611	1/1:21:0,21,0:0:0:21,0:732,0:-66.1414,-6.32163,0,-66.1414,-6.32163,-66.1414	1/1:125:0,125,0:0:0:125,0:4438,0:-399.53,-37.6288,0,-399.53,-37.6288,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chr04	30237945	.	C	A	31148.2	PASS	AB=0.483505;ABP=12.3945;AC=45;AF=0.239362;AN=188;AO=1934;CIGAR=1X;DP=8987;DPB=8987;DPRA=1.11101;EPP=4202.64;EPPR=15311.9;GTI=1;LEN=1;MEANALT=1.05556;MQM=58.7234;MQMR=59.7362;NS=94;NUMALT=1;ODDS=0.0789811;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68366;QR=251780;RO=7050;RPL=0;RPP=4202.64;RPPR=15303.2;RPR=1934;RUN=1;SAF=0;SAP=4202.64;SAR=1934;SRF=1;SRP=15303.2;SRR=7049;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:30,14:30:1062:14:504:-32.45,0,-82.6195	0/0:214:214,0:214:7638:0:0:0,-64.4204,-687.403	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.269	0/0:257:257,0:257:9175:0:0:0,-77.3647,-825.596	0/1:65:35,30:35:1260:30:1044:-74.6869,0,-94.137	0/1:67:26,40:26:936:40:1411:-107.006,0,-64.2858	0/1:199:104,94:104:3732:94:3334:-240.074,0,-276.107	0/1:186:91,95:91:3256:95:3340:-244.683,0,-237.267	0/0:78:76,2:76:2701:2:72:0,-16.6436,-236.423	0/0:134:134,0:134:4812:0:0:0,-40.338,-433.218	0/1:55:22,33:22:788:33:1180:-89.8946,0,-54.6881	0/1:60:28,32:28:1000:32:1087:-79.9965,0,-72.2536	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.631	0/0:82:82,0:82:2931:0:0:0,-24.6845,-264.018	0/0:35:35,0:35:1245:0:0:0,-10.536,-112.35	0/1:48:30,18:30:1065:18:632:-42.7573,0,-81.7088	0/1:79:45,34:45:1603:34:1220:-86.2896,0,-120.768	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.106	0/1:20:11,9:11:372:9:324:-23.4853,0,-27.7828	0/1:257:153,104:153:5492:104:3712:-256.769,0,-416.936	0/1:104:48,56:48:1697:56:1972:-146.363,0,-121.705	0/1:102:33,69:33:1184:69:2455:-190.304,0,-76.1623	0/0:95:95,0:95:3399:0:0:0,-28.5978,-305.962	0/0:169:168,1:168:6008:1:36:0,-47.2758,-537.161	0/0:73:73,0:73:2585:0:0:0,-21.9752,-232.897	0/0:319:319,0:319:11332:0:0:0,-96.0286,-1019.61	0/1:127:57,70:57:2027:70:2480:-184.896,0,-144.467	0/1:34:18,16:18:644:16:564:-40.8553,0,-48.0228	0/0:248:247,1:247:8845:1:36:0,-71.0582,-792.207	0/1:168:88,80:88:3164:80:2828:-204.051,0,-234.404	0/1:95:51,44:51:1836:44:1560:-112.073,0,-136.834	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.57002	0/1:22:13,9:13:460:9:311:-21.6856,0,-35.0842	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:155:155,0:155:5548:0:0:0,-46.6596,-499.423	0/1:165:82,83:82:2921:83:2929:-214.111,0,-213.449	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.277	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7889	0/0:194:192,2:192:6827:2:63:0,-52.4167,-608.438	0/1:22:11,11:11:396:11:392:-28.9506,0,-29.3585	0/1:138:66,72:66:2349:72:2515:-184.968,0,-170.096	0/1:47:24,23:24:856:23:820:-59.9663,0,-63.2127	0/0:42:42,0:42:1496:0:0:0,-12.6433,-134.738	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.892	0/0:178:176,2:176:6283:2:72:0,-46.9861,-558.783	0/1:161:91,70:91:3237:70:2508:-177.468,0,-243.066	0/1:124:74,50:74:2632:50:1775:-122.642,0,-199.656	0/1:89:48,41:48:1724:41:1455:-104.377,0,-128.651	0/1:178:87,91:87:3113:91:3219:-235.938,0,-226.754	0/1:6:4,2:4:144:2:72:-5.0297,0,-11.5074	0/0:114:114,0:114:4068:0:0:0,-34.3174,-366.299	0/1:110:60,50:60:2156:50:1780:-127.227,0,-161.185	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/0:123:123,0:123:4378:0:0:0,-37.0267,-394.191	0/1:36:14,22:14:500:22:784:-59.9695,0,-34.4991	0/0:23:23,0:23:805:0:0:0,-6.92369,-72.7666	0/1:9:7,2:7:252:2:72:-4.12554,0,-20.3197	0/1:84:35,49:35:1256:49:1757:-133.09,0,-87.7877	0/0:89:89,0:89:3151:0:0:0,-26.7917,-283.806	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:220:220,0:220:7849:0:0:0,-66.2266,-706.263	0/1:144:77,67:77:2737:67:2399:-172.591,0,-203.214	0/0:79:78,1:78:2792:1:36:0,-20.1831,-247.918	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.754	0/0:181:181,0:181:6449:0:0:0,-54.4864,-580.398	0/0:174:174,0:174:6228:0:0:0,-52.3792,-560.538	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8426	0/0:89:87,2:87:3107:2:72:0,-19.9549,-273.02	0/1:63:26,37:26:924:37:1316:-99.7367,0,-64.5128	0/1:26:12,14:12:432:14:496:-37.1427,0,-31.3944	0/1:100:49,51:49:1744:51:1773:-129.748,0,-127.14	0/0:80:80,0:80:2851:0:0:0,-24.0824,-256.453	0/0:77:77,0:77:2740:0:0:0,-23.1793,-246.838	0/0:184:184,0:184:6598:0:0:0,-55.3895,-593.556	0/1:134:90,44:90:3228:44:1559:-100.248,0,-250.391	0/0:107:106,1:106:3784:1:36:0,-28.6119,-337.152	0/1:10:6,4:6:216:4:144:-10.1933,0,-16.7802	0/1:138:65,73:65:2321:73:2538:-186.993,0,-167.597	0/1:135:84,51:84:3004:51:1777:-119.526,0,-229.166	0/0:279:276,2:276:9854:2:72:0,-77.2097,-879.736	0/0:94:94,0:94:3376:0:0:0,-28.2968,-304.029	0/0:54:54,0:54:1932:0:0:0,-16.2556,-173.524	0/1:65:25,40:25:892:40:1419:-108.379,0,-61.028	0/1:135:80,55:80:2855:55:1939:-134.068,0,-216.54	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.531	0/0:63:63,0:63:2268:0:0:0,-18.9649,-204.307	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.723	0/0:27:27,0:27:963:0:0:0,-8.12781,-86.9844	0/1:59:28,31:28:1004:31:1075:-79.2161,0,-72.9142	0/1:51:15,36:15:540:36:1260:-98.2791,0,-33.584	0/0:113:113,0:113:4028:0:0:0,-34.0164,-362.698	0/0:74:74,0:74:2619:0:0:0,-22.2762,-235.95
chr04	30237988	.	T	C	151371	PASS	AB=0.514918;ABP=10.7848;AC=143;AF=0.760638;AN=188;AO=7125;CIGAR=1X;DP=9092;DPB=9092;DPRA=0;EPP=15474.8;EPPR=4272.13;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.7061;MQMR=58.7518;NS=94;NUMALT=1;ODDS=0.419483;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=254224;QR=70348;RO=1966;RPL=7125;RPP=15474.8;RPPR=4272.13;RPR=0;RUN=1;SAF=0;SAP=15474.8;SAR=7125;SRF=0;SRP=4272.13;SRR=1966;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:46:16,30:16:572:30:1049:-80.8467,0,-37.9633	1/1:218:0,218:0:0:218:7771:-699.38,-65.6245,0	1/1:54:0,54:0:0:54:1930:-173.968,-16.2556,0	1/1:261:1,260:1:36:260:9231:-826.892,-74.9706,0	0/1:65:30,35:30:1080:35:1256:-93.7768,0,-77.9101	0/1:69:41,28:41:1463:28:1004:-69.903,0,-111.172	0/1:200:97,103:97:3465:103:3687:-271.818,0,-251.586	0/1:191:95,96:95:3374:96:3406:-249.253,0,-246.221	1/1:79:2,77:2:72:77:2745:-240.38,-16.9446,0	1/1:133:0,133:0:0:133:4741:-426.839,-40.037,0	0/1:55:33,22:33:1188:22:788:-54.6881,0,-90.6149	0/1:61:33,28:33:1184:28:1004:-72.313,0,-88.3967	1/1:56:0,56:0:0:56:2008:-180.991,-16.8577,0	1/1:82:0,82:0:0:82:2929:-263.836,-24.6845,0	1/1:35:0,35:0:0:35:1256:-113.343,-10.5361,0	0/1:45:17,28:17:612:28:1008:-77.4885,0,-41.8671	0/1:80:34,46:34:1220:46:1647:-124.425,0,-85.9886	1/1:59:0,59:0:0:59:2124:-191.422,-17.7608,0	0/1:20:9,11:9:324:11:396:-29.9617,0,-23.4853	0/1:263:106,157:106:3789:157:5600:-424.788,0,-261.83	0/1:103:54,49:54:1940:49:1764:-128.036,0,-143.751	0/1:103:70,33:70:2505:33:1180:-75.501,0,-194.627	1/1:96:0,96:0:0:96:3440:-309.681,-28.8989,0	1/1:170:1,169:1:36:169:6038:-539.895,-47.5768,0	1/1:75:0,75:0:0:75:2680:-241.444,-22.5773,0	1/1:316:0,316:0:0:316:11240:-1011.16,-95.1255,0	0/1:129:73,56:73:2613:56:2016:-142.875,0,-196.255	0/1:34:16,18:16:572:18:638:-47.5018,0,-41.5784	1/1:251:1,250:1:36:250:8841:-791.932,-71.9613,0	0/1:170:80,90:80:2872:90:3228:-239.561,0,-207.406	0/1:95:44,51:44:1564:51:1828:-136.164,0,-112.433	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:23:9,14:9:324:14:504:-38.7449,0,-22.5353	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:159:0,159:0:0:159:5682:-511.476,-47.8638,0	0/1:169:85,84:85:3044:84:3001:-219.367,0,-223.245	1/1:55:0,55:0:0:55:1936:-174.514,-16.5567,0	1/1:6:0,6:0:0:6:212:-19.4232,-1.80618,0	1/1:199:2,197:2:72:197:7019:-624.848,-53.0682,0	0/1:23:12,11:12:432:11:392:-28.6948,0,-32.2508	0/1:139:73,66:73:2605:66:2364:-171.145,0,-192.744	0/1:48:25,23:25:900:23:828:-60.3947,0,-66.8631	1/1:44:0,44:0:0:44:1568:-141.297,-13.2453,0	1/1:65:0,65:0:0:65:2332:-210.135,-19.567,0	1/1:183:2,181:2:68:181:6431:-572.287,-48.7434,0	0/1:165:73,92:73:2612:92:3281:-245.817,0,-185.62	0/1:125:50,74:50:1800:74:2652:-201.217,0,-124.532	0/1:87:41,46:41:1472:46:1641:-121.785,0,-106.452	0/1:183:93,90:93:3340:90:3197:-232.804,0,-245.282	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.0297	1/1:115:0,115:0:0:115:4132:-372.055,-34.6185,0	0/1:109:49,60:49:1741:60:2145:-160.503,0,-124.11	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:127:0,127:0:0:127:4480:-403.367,-38.2308,0	0/1:38:23,15:23:816:15:536:-37.0988,0,-62.2455	1/1:24:0,24:0:0:24:849:-76.7269,-7.22472,0	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12554	0/1:84:50,34:50:1792:34:1224:-85.1805,0,-136.244	1/1:90:0,90:0:0:90:3224:-289.097,-27.0927,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:217:0,217:0:0:217:7737:-696.309,-65.3235,0	0/1:145:66,79:66:2368:79:2817:-210.109,0,-169.502	1/1:83:1,82:1:36:82:2948:-261.946,-21.3872,0	1/1:53:0,53:0:0:53:1904:-171.633,-15.9546,0	1/1:183:0,183:0:0:183:6548:-589.302,-55.0885,0	1/1:177:0,177:0:0:177:6299:-566.962,-53.2823,0	1/1:22:0,22:0:0:22:792:-71.6041,-6.62266,0	1/1:89:2,87:2:72:87:3124:-274.549,-19.9549,0	0/1:63:37,26:37:1332:26:936:-65.5946,0,-101.171	0/1:23:13,10:13:468:10:360:-25.8206,0,-35.5311	0/1:104:54,50:54:1925:50:1796:-130.569,0,-142.218	1/1:80:0,80:0:0:80:2872:-258.086,-24.0824,0	1/1:80:0,80:0:0:80:2864:-257.981,-24.0824,0	1/1:184:0,184:0:0:184:6540:-588.349,-55.3895,0	0/1:138:46,92:46:1656:92:3293:-254.962,0,-107.771	1/1:106:1,105:1:36:105:3734:-332.657,-28.3109,0	0/1:11:4,7:4:140:7:248:-19.3485,0,-9.54484	0/1:143:75,68:75:2666:68:2394:-172.657,0,-196.991	0/1:136:53,83:53:1881:83:2958:-225.432,0,-128.591	1/1:282:3,279:3:108:279:9933:-883.759,-74.8157,0	1/1:95:0,95:0:0:95:3393:-305.559,-28.5979,0	1/1:56:0,56:0:0:56:1985:-178.29,-16.8577,0	0/1:65:40,25:40:1440:25:896:-61.3887,0,-110.269	0/1:135:55,80:55:1965:80:2876:-218.057,0,-136.403	1/1:43:0,43:0:0:43:1533:-138.256,-12.9443,0	1/1:63:0,63:0:0:63:2249:-202.596,-18.9649,0	1/1:49:0,49:0:0:49:1764:-159.04,-14.7505,0	1/1:29:0,29:0:0:29:1040:-93.9128,-8.72987,0	0/1:60:32,28:32:1144:28:996:-71.8924,0,-85.0128	0/1:51:36,15:36:1288:15:540:-33.584,0,-100.794	1/1:112:0,112:0:0:112:3993:-358.992,-33.7154,0	1/1:73:0,73:0:0:73:2607:-234.874,-21.9752,0
chr04	30478939	.	AGCA	GGAA,AGAA	393937	PASS	AB=0.599338,0.395527;ABP=754.113,833.775;AC=143,45;AF=0.760638,0.239362;AN=188;AO=13712,3482;CIGAR=1X1M1X1M,2M1X1M;DP=17282;DPB=17281;DPRA=0,1.20717;EPP=23120,6926.67;EPPR=0;GTI=2;LEN=4,1;MEANALT=2.34043,2.81818;MQM=59.9437,59.9931;MQMR=0;NS=94;NUMALT=2;ODDS=7.84117;PAIRED=0,0;PAIREDR=0;PAO=0.833333,0.333333;PQA=28,12;PQR=12;PRO=0.333333;QA=482949,124735;QR=0;RO=0;RPL=12897,3407;RPP=23120,6926.67;RPPR=0;RPR=815,75;RUN=1,1;SAF=0,0;SAP=29778.2,7564.08;SAR=13712,3482;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:19:0,12,7:0:0:12,7:423,252:-55.3574,-20.9217,-17.3094,-34.7927,0,-32.6855	1/1:182:0,180,0:0:0:180,0:6321,0:-568.703,-54.1854,0,-568.703,-54.1854,-568.703	1/1:88:0,88,0:0:0:88,0:3094,0:-278.688,-26.4906,0,-278.688,-26.4906,-278.688	1/1:179:0,178,0:0:0:178,0:6220,0:-559.544,-53.5833,0,-559.544,-53.5833,-559.544	1/2:52:0,34,16:0:0:34,16:1194,572:-143.912,-46.7306,-36.4956,-97.2684,0,-92.4519	1/2:49:0,32,17:0:0:32,17:1103,612:-139.881,-50.2959,-40.663,-89.9398,0,-84.8223	1/2:36:0,25,11:0:0:25,11:889,396:-105.117,-32.6714,-25.1457,-72.8039,0,-69.4926	1/2:131:0,75,54:0:0:75,54:2628,1944:-372.455,-158.621,-136.043,-213.831,0,-197.575	1/1:152:0,152,0:0:0:152,0:5325,0:-479.377,-45.7566,0,-479.377,-45.7566,-479.377	1/1:107:0,106,0:0:0:106,0:3692,0:-332.143,-31.9092,0,-332.143,-31.9092,-332.143	1/2:190:0,108,80:0:0:108,80:3834,2868:-546.418,-234.027,-201.516,-312.499,0,-288.417	1/2:62:0,38,24:0:0:38,24:1340,856:-179.239,-70.1364,-58.6972,-109.458,0,-102.233	1/1:60:0,56,1:0:0:56,1:1948,36:-175.241,-16.8577,0,-172.303,-13.9178,-172.002	1/1:61:0,61,0:0:0:61,0:2112,0:-190.341,-18.3628,0,-190.341,-18.3628,-190.341	1/1:68:0,66,0:0:0:66,0:2352,0:-211.658,-19.868,0,-211.658,-19.868,-211.658	1/2:57:0,37,20:0:0:37,20:1300,708:-163.835,-58.025,-46.8869,-106.163,0,-100.142	1/2:40:0,19,21:0:0:19,21:660,756:-115.696,-62.0456,-56.326,-54.0032,0,-47.6816	1/1:46:0,46,0:0:0:46,0:1638,0:-147.708,-13.8474,0,-147.708,-13.8474,-147.708	1/2:131:0,74,57:0:0:74,57:2617,2048:-380.579,-167.433,-145.157,-213.503,0,-196.344	1/2:168:0,131,37:0:0:131,37:4636,1324:-485.938,-108.324,-68.8891,-377.971,0,-366.833	1/2:171:0,118,50:0:0:118,50:4125,1779:-480.6,-145.038,-109.516,-335.613,0,-320.561	1/2:51:0,21,28:0:0:21,28:756,1008:-144.077,-82.3875,-76.0659,-61.8226,0,-53.3937	1/1:76:0,76,0:0:0:76,0:2704,0:-243.587,-22.8783,0,-243.587,-22.8783,-243.587	1/1:72:0,68,4:0:0:68,4:2388,140:-214.828,-20.47,0,-203.437,-8.72958,-202.233	1/2:47:0,37,10:0:0:37,10:1293,360:-134.905,-29.734,-18.5959,-105.529,0,-102.519	1/1:317:0,315,0:0:0:315,0:11071,0:-995.997,-94.8245,0,-995.997,-94.8245,-995.997	1/2:199:0,118,80:0:0:118,80:4126,2872:-569.992,-234.363,-198.841,-335.713,0,-311.631	1/1:36:0,35,0:0:0:35,0:1217,0:-109.471,-10.5361,0,-109.471,-10.5361,-109.471	1/1:312:0,312,0:0:0:312,0:10976,0:-987.756,-93.9214,0,-987.756,-93.9214,-987.756	1/2:79:0,37,42:0:0:37,42:1324,1512:-231.697,-123.731,-112.593,-108.324,0,-95.6811	1/2:81:0,49,32:0:0:49,32:1743,1148:-236.039,-93.9969,-79.2464,-142.399,0,-132.766	1/2:731:0,468,260:0:0:468,260:16645,9312:-2115.88,-759.413,-618.531,-1356.47,0,-1278.2	1/2:898:0,607,287:0:0:607,287:21475,10308:-2589.8,-840.933,-658.208,-1748.91,0,-1662.52	1/1:671:0,666,1:0:0:666,1:23388,36:-2104,-200.486,0,-2101.06,-197.541,-2100.76	1/2:1390:0,712,671:0:0:712,671:25041,24018:-3996.77,-1958.64,-1744.31,-2038.17,0,-1836.18	1/1:539:0,537,0:0:0:537,0:18882,0:-1698.46,-161.653,0,-1698.46,-161.653,-1698.46	1/1:286:0,286,0:0:0:286,0:10000,0:-899.962,-86.0946,0,-899.962,-86.0946,-899.962	1/2:146:0,84,62:0:0:84,62:2894,2219:-416.365,-181.31,-156.023,-235.407,0,-216.743	1/1:298:0,297,0:0:0:297,0:10550,0:-949.065,-89.4059,0,-949.065,-89.4059,-949.065	1/1:405:0,401,0:0:0:401,0:14123,0:-1270.4,-120.713,0,-1270.4,-120.713,-1270.4	1/1:103:0,101,2:0:0:101,2:3560,72:-320.116,-30.404,0,-314.241,-24.1694,-313.639	1/2:139:0,82,57:0:0:82,57:2910,2052:-404.869,-167.775,-143.091,-237.451,0,-220.293	1/2:80:0,59,21:0:0:59,21:2085,756:-231.848,-62.0456,-44.2848,-170.16,0,-163.839	1/2:65:0,41,24:0:0:41,24:1450,860:-188.594,-70.4971,-58.1549,-118.453,0,-111.229	1/1:62:0,61,0:0:0:61,0:2155,0:-193.856,-18.3628,0,-193.856,-18.3628,-193.856	1/1:49:0,48,0:0:0:48,0:1684,0:-151.562,-14.4494,0,-151.562,-14.4494,-151.562	1/1:201:0,198,1:0:0:198,1:6997,36:-629.49,-59.6039,0,-626.553,-56.6414,-626.252	1/2:109:0,74,35:0:0:74,35:2611,1260:-315.773,-103.169,-80.8932,-212.962,0,-202.426	1/2:78:0,60,16:0:0:60,16:2122,576:-219.914,-47.0786,-29.0168,-172.914,0,-168.097	1/2:72:0,52,20:0:0:52,20:1815,704:-205.289,-57.6639,-42.0104,-147.976,0,-141.955	1/2:91:0,78,12:0:0:78,12:2746,432:-258.793,-35.249,-11.7687,-223.543,0,-219.931	1/2:580:0,302,273:0:0:302,273:10682,9766:-1666.44,-796.407,-705.496,-870.09,0,-787.909	1/1:125:0,124,0:0:0:124,0:4424,0:-397.97,-37.3277,0,-397.97,-37.3277,-397.97	1/2:27:0,9,18:0:0:9,18:322,644:-79.1294,-52.8721,-50.1628,-26.6149,0,-21.1964	1/1:323:0,320,0:0:0:320,0:11199,0:-1007.49,-96.3296,0,-1007.49,-96.3296,-1007.49	1/1:163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chr04	30612545	.	A	G	26870.7	PASS	AB=0.385774;ABP=544.726;AC=44;AF=0.234043;AN=188;AO=1872;CIGAR=1X;DP=12130;DPB=12130;DPRA=1.15721;EPP=4068.01;EPPR=22260.6;GTI=6;LEN=1;MEANALT=1.03175;MQM=59.2927;MQMR=59.9861;NS=94;NUMALT=1;ODDS=1.12253;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66737;QR=366506;RO=10254;RPL=0;RPP=4068.01;RPPR=22269.3;RPR=1872;RUN=1;SAF=1872;SAP=4068.01;SAR=0;SRF=10253;SRP=22260.6;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:19,18:19:684:18:644:-47.1525,0,-50.7522	0/0:218:217,1:217:7728:1:36:0,-62.0263,-691.952	0/0:150:150,0:150:5346:0:0:0,-45.1545,-481.272	0/0:127:127,0:127:4564:0:0:0,-38.2308,-410.924	0/1:58:36,22:36:1292:22:777:-52.7906,0,-99.124	0/1:58:36,22:36:1292:22:784:-53.3611,0,-99.124	0/1:109:54,55:54:1936:55:1961:-143.897,0,-141.704	0/1:140:69,71:69:2425:71:2544:-186.434,0,-176.359	0/0:98:97,1:97:3465:1:36:0,-25.9027,-308.445	0/0:90:90,0:90:3220:0:0:0,-27.0927,-290.023	0/1:98:54,44:54:1936:44:1584:-112.968,0,-145.015	0/1:211:73,138:73:2624:138:4939:-380.404,0,-172.89	0/0:148:148,0:148:5320:0:0:0,-44.5524,-478.931	0/0:172:172,0:172:6152:0:0:0,-51.7772,-553.777	0/0:135:135,0:135:4852:0:0:0,-40.639,-436.832	0/1:171:108,63:108:3880:63:2256:-151.629,0,-297.917	0/1:112:63,49:63:2230:49:1764:-125.204,0,-167.217	0/0:125:125,0:125:4476:0:0:0,-37.6287,-403.009	0/1:452:379,73:379:13464:73:2616:-99.6054,0,-1075.47	0/1:115:68,47:68:2402:47:1688:-117.376,0,-181.816	0/1:180:115,65:115:4094:65:2324:-154.972,0,-314.452	0/1:39:22,17:22:784:17:600:-42.5783,0,-59.1437	0/0:161:161,0:161:5704:0:0:0,-48.4658,-513.478	0/0:93:87,6:87:3108:6:216:0,-8.20528,-260.157	0/1:47:17,30:17:604:30:1079:-83.2431,0,-40.5422	0/0:280:280,0:280:10019:0:0:0,-84.2884,-901.641	0/1:401:247,154:247:8837:154:5472:-371.816,0,-674.602	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.784	0/0:144:144,0:144:5149:0:0:0,-43.3483,-463.55	0/1:88:67,21:67:2381:21:741:-40.521,0,-188.056	0/1:90:65,25:65:2317:25:896:-53.85,0,-181.681	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:40:35,5:35:1256:5:180:-4.51087,0,-101.304	0/0:81:81,0:81:2889:0:0:0,-24.3834,-260.245	0/1:18:10,8:10:360:8:288:-20.7627,0,-27.3258	0/0:30:30,0:30:1060:0:0:0,-9.0309,-95.7113	0/0:319:318,1:318:11348:1:36:0,-92.4303,-1017.6	0/1:63:43,20:43:1548:20:716:-45.8028,0,-120.648	0/0:212:212,0:212:7612:0:0:0,-63.8184,-685.114	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:119:117,2:117:4163:2:72:0,-28.9858,-368.013	0/1:73:38,35:38:1368:35:1256:-91.3454,0,-101.446	0/1:116:71,45:71:2536:45:1597:-108.905,0,-193.382	0/1:265:209,56:209:7497:56:1997:-100.225,0,-594.995	0/0:131:130,0:130:4652:0:0:0,-39.1339,-418.483	0/0:97:96,1:96:3437:1:36:0,-25.6016,-305.943	0/0:81:80,1:80:2876:1:36:0,-20.7852,-255.478	0/1:64:33,31:33:1188:31:1112:-81.0783,0,-87.9627	0/1:66:37,29:37:1324:29:1035:-73.5937,0,-99.5941	0/1:90:52,38:52:1838:38:1368:-96.3105,0,-138.604	0/1:107:38,68:38:1345:68:2425:-186.228,0,-89.0793	0/0:12:12,0:12:413:0:0:0,-3.61236,-37.4978	0/0:195:195,0:195:6958:0:0:0,-58.7008,-626.284	0/1:85:59,26:59:2108:26:924:-57.7815,0,-164.402	0/0:18:18,0:18:636:0:0:0,-5.41854,-57.568	0/0:136:135,1:135:4844:1:36:0,-37.3418,-432.515	0/1:59:52,7:52:1860:7:252:-5.26819,0,-149.919	0/0:21:21,0:21:737:0:0:0,-6.32163,-66.6506	0/1:16:10,6:10:356:6:212:-14.6083,0,-27.5648	0/1:69:39,30:39:1396:30:1059:-74.8086,0,-105.168	0/0:399:397,1:397:14253:1:36:0,-116.571,-1278.92	0/0:18:18,0:18:633:0:0:0,-5.41854,-57.2951	0/0:81:80,1:80:2842:1:36:0,-20.7852,-252.417	0/1:118:84,34:84:3024:34:1186:-71.4979,0,-236.868	0/0:96:92,4:92:3300:4:144:0,-15.5853,-283.905	0/0:48:48,0:48:1705:0:0:0,-14.4494,-153.734	0/0:135:134,1:134:4762:1:36:0,-37.0408,-425.139	0/0:177:176,1:176:6317:1:36:0,-49.684,-565.02	0/0:89:88,1:88:3149:1:36:0,-23.1934,-280.035	0/0:72:72,0:72:2569:0:0:0,-21.6742,-231.458	0/1:154:99,55:99:3518:55:1927:-127.333,0,-270.47	0/1:20:15,5:15:540:5:180:-10.5016,0,-42.9159	0/1:76:22,54:22:777:54:1917:-149.822,0,-47.3721	0/0:61:61,0:61:2165:0:0:0,-18.3628,-195.115	0/0:222:221,1:221:7906:1:32:0,-63.6372,-708.371	0/0:111:111,0:111:3973:0:0:0,-33.4143,-357.759	0/1:86:48,38:48:1728:38:1334:-94.4365,0,-129.917	0/0:119:118,1:118:4213:1:36:0,-32.2243,-375.752	0/1:43:35,8:35:1256:8:288:-13.3231,0,-100.401	0/1:73:42,31:42:1504:31:1111:-78.3203,0,-113.679	0/1:74:46,28:46:1618:28:989:-67.0412,0,-123.629	0/0:293:292,1:292:10427:1:36:0,-84.6035,-934.749	0/0:246:246,0:246:8812:0:0:0,-74.0534,-793.065	0/0:202:202,0:202:7211:0:0:0,-60.8081,-649.041	0/1:149:92,57:92:3293:57:2040:-138.992,0,-251.734	0/1:186:110,76:110:3937:76:2686:-185.976,0,-298.529	0/0:102:101,0:101:3605:0:0:0,-30.404,-324.295	0/0:718:717,1:717:25692:1:36:0,-212.541,-2307.9	0/0:139:139,0:139:4980:0:0:0,-41.8432,-448.348	0/0:257:257,0:257:9177:0:0:0,-77.3647,-825.903	0/1:152:77,75:77:2741:75:2673:-194.834,0,-201.045	0/1:106:44,62:44:1569:62:2204:-166.691,0,-109.59	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/0:241:240,1:240:8608:1:36:0,-68.95,-771.028
chr04	30612550	.	C	A	27471.1	PASS	AB=0.387453;ABP=530.898;AC=44;AF=0.234043;AN=188;AO=1877;CIGAR=1X;DP=12089;DPB=12089;DPRA=0.75948;EPP=4078.86;EPPR=22160.7;GTI=6;LEN=1;MEANALT=1.01852;MQM=59.2941;MQMR=59.9854;NS=94;NUMALT=1;ODDS=0.341115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67219;QR=364770;RO=10208;RPL=0;RPP=4078.86;RPPR=22169.4;RPR=1877;RUN=1;SAF=1877;SAP=4078.86;SAR=0;SRF=10207;SRP=22160.7;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:19,18:19:684:18:633:-46.157,0,-50.7522	0/0:215:215,0:215:7720:0:0:0,-64.7214,-694.83	0/0:149:149,0:149:5308:0:0:0,-44.8535,-477.855	0/0:124:124,0:124:4436:0:0:0,-37.3277,-399.412	0/1:59:37,22:37:1316:22:777:-52.4896,0,-100.981	0/1:58:36,22:36:1292:22:788:-53.7219,0,-99.124	0/1:108:53,55:53:1896:55:1971:-145.102,0,-138.407	0/1:140:68,72:68:2428:72:2592:-190.762,0,-176.632	0/0:97:97,0:97:3476:0:0:0,-29.1999,-313.034	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/1:100:53,46:53:1904:46:1652:-118.424,0,-141.476	0/1:210:72,138:72:2566:138:4952:-381.835,0,-167.973	0/0:145:145,0:145:5186:0:0:0,-43.6493,-466.879	0/0:170:170,0:170:6054:0:0:0,-51.1751,-544.966	0/0:134:134,0:134:4795:0:0:0,-40.338,-431.706	0/1:170:107,63:107:3813:63:2264:-152.649,0,-292.192	0/1:115:65,50:65:2309:50:1784:-126.102,0,-173.422	0/0:123:123,0:123:4387:0:0:0,-37.0267,-395.004	0/1:454:383,71:383:13683:71:2548:-92.886,0,-1094.59	0/1:116:69,47:69:2464:47:1680:-116.355,0,-187.095	0/1:178:115,63:115:4116:63:2264:-150.194,0,-317.035	0/1:37:20,17:20:720:17:611:-44.1765,0,-53.9907	0/0:160:159,0:159:5684:0:0:0,-47.8638,-511.32	0/0:91:86,5:86:3059:5:180:0,-10.8417,-258.988	0/1:47:17,30:17:608:30:1066:-82.0711,0,-40.9036	0/0:273:273,0:273:9769:0:0:0,-82.1812,-879.156	0/1:403:248,155:248:8867:155:5524:-375.89,0,-676.662	0/0:61:61,0:61:2171:0:0:0,-18.3628,-195.656	0/0:143:142,1:142:5066:1:36:0,-39.449,-452.487	0/1:88:66,22:66:2376:22:784:-44.3933,0,-187.607	0/1:90:64,26:64:2304:26:921:-56.1052,0,-180.512	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:40:35,5:35:1252:5:180:-4.51087,0,-100.944	0/0:82:82,0:82:2911:0:0:0,-24.6845,-262.226	0/1:18:10,8:10:356:8:288:-20.7627,0,-26.9627	0/0:30:30,0:30:1067:0:0:0,-9.0309,-96.3412	0/0:315:315,0:315:11222:0:0:0,-94.8244,-1009.87	0/1:64:44,20:44:1568:20:716:-45.5018,0,-122.146	0/0:213:213,0:213:7623:0:0:0,-64.1194,-686.107	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:120:118,2:118:4228:2:72:0,-29.2869,-373.863	0/1:73:38,35:38:1355:35:1260:-91.7056,0,-100.275	0/1:117:72,45:72:2563:45:1616:-110.316,0,-195.612	0/1:268:209,59:209:7430:59:2124:-110.743,0,-588.072	0/0:128:128,0:128:4592:0:0:0,-38.5318,-413.444	0/0:98:98,0:98:3503:0:0:0,-29.5009,-315.392	0/0:81:81,0:81:2912:0:0:0,-24.3834,-262.315	0/1:65:34,31:34:1216:31:1096:-79.3279,0,-90.1796	0/1:67:37,30:37:1320:30:1076:-76.9732,0,-98.9329	0/1:89:51,38:51:1828:38:1349:-94.899,0,-138.009	0/1:111:40,71:40:1436:71:2548:-196.149,0,-96.1233	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:193:193,0:193:6881:0:0:0,-58.0988,-619.36	0/1:84:58,26:58:2088:26:936:-59.1643,0,-162.903	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:138:138,0:138:4944:0:0:0,-41.5421,-445.109	0/1:59:52,7:52:1868:7:252:-5.26819,0,-150.638	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:17:11,6:11:392:6:216:-14.673,0,-30.5025	0/1:69:40,29:40:1440:29:1032:-72.3869,0,-109.127	0/0:393:392,0:392:14028:0:0:0,-118.004,-1261.93	0/0:18:18,0:18:635:0:0:0,-5.41854,-57.477	0/0:82:81,1:81:2876:1:36:0,-21.0862,-255.48	0/1:117:83,34:83:2955:34:1224:-75.2252,0,-230.963	0/0:93:89,4:89:3188:4:144:0,-14.6822,-273.83	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/0:133:132,1:132:4716:1:36:0,-36.4387,-421.002	0/0:173:172,1:172:6151:1:36:0,-48.4799,-550.091	0/0:89:89,0:89:3180:0:0:0,-26.7917,-286.425	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.332	0/1:150:96,54:96:3439:54:1940:-129.71,0,-264.568	0/1:20:15,5:15:536:5:180:-10.5016,0,-42.5542	0/1:76:22,54:22:788:54:1944:-152.211,0,-48.3665	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/0:227:226,1:226:8064:1:36:0,-64.755,-722.204	0/0:109:109,0:109:3903:0:0:0,-32.8123,-351.463	0/1:89:49,40:49:1748:40:1432:-102.345,0,-130.813	0/0:118:117,1:117:4172:1:36:0,-31.9233,-372.066	0/1:45:37,8:37:1320:8:288:-12.7211,0,-105.556	0/1:74:42,32:42:1492:32:1152:-81.6963,0,-112.298	0/1:75:46,29:46:1639:29:1021:-69.6229,0,-125.221	0/0:288:288,0:288:10352:0:0:0,-86.6966,-931.596	0/0:240:240,0:240:8553:0:0:0,-72.2472,-769.77	0/0:201:200,0:200:7132:0:0:0,-60.206,-641.579	0/1:149:91,58:91:3260:58:2084:-142.949,0,-248.767	0/1:189:112,77:112:4011:77:2753:-191.094,0,-304.284	0/0:101:101,0:101:3603:0:0:0,-30.404,-324.477	0/0:721:721,0:721:25806:0:0:0,-217.043,-2321.76	0/0:142:141,1:141:5034:1:36:0,-39.148,-449.608	0/0:257:257,0:257:9128:0:0:0,-77.3647,-821.499	0/1:152:75,77:75:2650:77:2757:-202.261,0,-192.99	0/1:105:44,61:44:1576:61:2188:-165.556,0,-110.523	0/0:60:60,0:60:2144:0:0:0,-18.0618,-193.228	0/0:242:242,0:242:8639:0:0:0,-72.8493,-777.417
chr04	30662814	.	C	T	162922	PASS	AB=0.491864;ABP=5.66045;AC=143;AF=0.760638;AN=188;AO=7743;CIGAR=1X;DP=10148;DPB=10148;DPRA=0;EPP=16359.5;EPPR=666.696;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.6866;MQMR=59.9659;NS=94;NUMALT=1;ODDS=8.12838;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=272875;QR=85779;RO=2403;RPL=7690;RPP=16359.5;RPPR=663.601;RPR=53;RUN=1;SAF=0;SAP=16816.7;SAR=7743;SRF=1;SRP=5212.38;SRR=2402;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:20,17:20:720:17:604:-43.5491,0,-53.9907	1/1:244:5,239:5:180:239:8403:-739.711,-56.8993,0	1/1:162:0,162:0:0:162:5724:-515.209,-48.7669,0	1/1:206:1,205:1:36:205:7278:-651.222,-58.4139,0	0/1:80:39,41:39:1391:41:1464:-107.974,0,-101.406	0/1:72:30,42:30:1059:42:1489:-112.628,0,-73.9463	0/1:177:94,83:94:3363:83:2943:-211.804,0,-249.604	1/1:175:0,175:0:0:175:6190:-557.197,-52.6803,0	1/1:86:1,85:1:36:85:2994:-266.062,-22.2903,0	1/1:116:0,116:0:0:116:4070:-366.47,-34.9195,0	0/1:68:32,36:32:1127:36:1261:-93.3171,0,-81.2674	0/1:73:28,45:28:991:45:1608:-123.028,0,-67.5283	1/1:60:0,60:0:0:60:2128:-191.734,-18.0618,0	1/1:69:0,69:0:0:69:2428:-218.762,-20.7711,0	1/1:51:1,50:1:36:50:1780:-156.885,-11.7543,0	0/1:55:34,21:34:1211:21:752:-51.4496,0,-92.7389	0/1:71:45,26:45:1620:26:882:-58.3115,0,-124.717	1/1:55:0,55:0:0:55:1960:-176.672,-16.5567,0	0/1:57:27,30:27:964:30:1029:-75.7112,0,-69.9181	0/1:241:110,131:110:3913:131:4634:-344.629,0,-279.815	0/1:145:79,66:79:2814:66:2329:-166.22,0,-209.85	0/1:141:95,46:95:3399:46:1593:-101.205,0,-263.679	1/1:35:0,35:0:0:35:1244:-112.261,-10.5361,0	1/1:150:13,137:13:468:137:4893:-398.056,-2.69486,0	0/1:82:49,33:49:1743:33:1149:-79.023,0,-132.465	1/1:274:0,274:0:0:274:9559:-860.259,-82.4822,0	0/1:240:110,129:110:3939:129:4530:-335.507,0,-282.395	1/1:19:0,19:0:0:19:676:-61.1634,-5.71957,0	1/1:238:0,238:0:0:238:8333:-749.808,-71.6451,0	0/1:218:108,110:108:3850:110:3878:-283.559,0,-281.071	0/1:182:91,91:91:3246:91:3208:-234.153,0,-237.573	0/1:17:8,9:8:288:9:306:-22.7447,0,-21.1499	0/1:30:15,15:15:540:15:528:-38.8205,0,-39.9056	1/1:15:0,15:0:0:15:528:-47.8514,-4.51545,0	0/1:19:11,8:11:396:8:273:-19.1806,0,-30.2632	1/1:35:0,35:0:0:35:1214:-109.552,-10.5361,0	1/1:147:0,147:0:0:147:5213:-469.291,-44.2514,0	0/1:232:105,127:105:3752:127:4451:-330.815,0,-267.587	1/1:95:0,95:0:0:95:3376:-303.995,-28.5979,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:135:2,133:2:72:133:4702:-416.485,-33.8023,0	0/1:56:18,38:18:648:38:1352:-105.118,0,-41.7942	0/1:146:86,60:86:3058:60:2128:-147.788,0,-231.499	0/1:74:40,34:40:1424:34:1185:-84.6741,0,-106.181	1/1:38:0,38:0:0:38:1352:-121.976,-11.4391,0	1/1:128:0,128:0:0:128:4443:-399.953,-38.5318,0	1/1:147:0,146:0:0:146:5164:-464.594,-43.9504,0	0/1:200:104,96:104:3736:96:3396:-244.945,0,-276.22	0/1:135:66,69:66:2360:69:2441:-179.303,0,-172.02	0/1:161:80,81:80:2855:81:2873:-210.338,0,-208.722	0/1:223:142,81:142:5078:81:2860:-190.503,0,-390.034	0/1:24:10,14:10:351:14:492:-37.3876,0,-24.702	1/1:170:0,170:0:0:170:5967:-537.11,-51.1751,0	0/1:58:31,27:31:1100:27:922:-65.8274,0,-81.8505	1/1:43:0,43:0:0:43:1501:-135.357,-12.9443,0	1/1:137:0,137:0:0:137:4810:-432.822,-41.2411,0	0/1:27:7,20:7:248:20:704:-55.5567,0,-14.5364	1/1:23:0,23:0:0:23:799:-72.2276,-6.92369,0	0/1:31:12,19:12:432:19:657:-50.1152,0,-29.8893	0/1:68:32,36:32:1148:36:1275:-94.5804,0,-83.1598	1/1:112:0,112:0:0:112:3994:-359.612,-33.7154,0	1/1:14:0,14:0:0:14:496:-44.9719,-4.21442,0	1/1:231:0,231:0:0:231:8106:-729.445,-69.5379,0	0/1:222:96,126:96:3412:126:4442:-332.488,0,-240.464	1/1:114:1,113:1:36:113:3963:-352.925,-30.7191,0	1/1:89:0,89:0:0:89:3169:-285.422,-26.7917,0	1/1:170:2,168:2:68:168:5843:-519.359,-44.7174,0	1/1:214:1,213:1:36:213:7476:-669.158,-60.8221,0	1/1:36:0,36:0:0:36:1257:-113.426,-10.8371,0	1/1:81:0,81:0:0:81:2834:-255.299,-24.3834,0	0/1:76:40,36:40:1401:36:1273:-91.9926,0,-103.507	0/1:18:5,13:5:171:13:456:-35.9547,0,-10.3069	0/1:142:63,79:63:2239:79:2798:-209.313,0,-159.027	1/1:103:0,103:0:0:103:3630:-326.889,-31.0061,0	1/1:137:0,137:0:0:137:4835:-435.244,-41.2411,0	1/1:193:0,193:0:0:193:6803:-612.321,-58.0988,0	0/1:146:76,70:76:2732:70:2468:-178.416,0,-202.172	1/1:148:1,147:1:36:147:5198:-464.1,-40.9542,0	0/0:33:30,3:30:1080:3:104:0,-0.231185,-87.8104	0/1:114:56,58:56:2000:58:2008:-146.659,0,-145.956	0/1:126:63,63:63:2256:63:2189:-158.918,0,-165.373	1/1:239:0,239:0:0:239:8472:-762.254,-71.9462,0	1/1:79:1,78:1:36:78:2780:-246.678,-20.1831,0	1/1:52:0,52:0:0:52:1852:-166.954,-15.6536,0	0/1:56:28,28:28:996:28:999:-73.3668,0,-73.0972	0/1:101:53,48:53:1892:48:1710:-123.78,0,-140.154	1/1:38:0,38:0:0:38:1352:-121.98,-11.4391,0	1/1:76:0,76:0:0:76:2663:-239.901,-22.8783,0	1/1:62:1,61:1:36:61:2157:-190.784,-15.0656,0	1/1:47:0,47:0:0:47:1667:-150.295,-14.1484,0	0/1:106:57,49:57:2040:49:1749:-125.724,0,-151.963	0/1:62:46,16:46:1648:16:553:-31.4301,0,-129.945	1/1:134:1,133:1:36:133:4721:-421.438,-36.7397,0	1/1:77:1,76:1:36:76:2685:-238.288,-19.581,0
chr04	30663048	.	T	C	73447.8	PASS	AB=0.499137;ABP=3.06649;AC=44;AF=0.234043;AN=188;AO=4358;CIGAR=1X;DP=16758;DPB=16758;DPRA=2.00592;EPP=9370.98;EPPR=26557;GTI=1;LEN=1;MEANALT=1.125;MQM=59.9715;MQMR=59.9927;NS=94;NUMALT=1;ODDS=0.409696;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=154968;QR=442074;RO=12392;RPL=4347;RPP=9370.98;RPPR=26557;RPR=11;RUN=1;SAF=0;SAP=9466.29;SAR=4358;SRF=0;SRP=26911.9;SRR=12392;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:25,18:25:888:18:648:-45.7076,0,-67.2947	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/0:57:57,0:57:2024:0:0:0,-17.1587,-182.428	0/0:139:138,1:138:4909:1:32:0,-38.6439,-438.764	0/1:65:25,40:25:900:40:1407:-107.334,0,-61.7541	0/1:43:18,24:18:644:24:841:-63.0037,0,-45.2876	0/1:88:53,35:53:1900:35:1252:-86.4944,0,-144.787	0/0:172:170,2:170:6072:2:65:0,-45.6079,-540.415	0/0:91:91,0:91:3240:0:0:0,-27.3937,-291.823	0/0:93:93,0:93:3313:0:0:0,-27.9958,-298.388	0/1:89:44,45:44:1568:45:1587:-116.328,0,-114.62	0/1:38:18,20:18:640:20:716:-53.3286,0,-46.4902	0/0:31:31,0:31:1100:0:0:0,-9.33193,-99.3103	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/1:16:6,10:6:212:10:349:-26.9283,0,-14.6083	0/1:14:8,6:8:288:6:212:-15.2104,0,-22.053	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/1:52:31,21:31:1097:21:756:-52.7137,0,-83.3845	0/1:129:58,71:58:2076:71:2527:-188.849,0,-148.278	0/1:129:60,67:60:2156:67:2389:-176.675,0,-155.716	0/1:158:37,121:37:1324:121:4267:-336.646,0,-71.8994	0/0:122:121,1:121:4292:1:36:0,-33.1274,-382.861	0/0:58:57,1:57:2048:1:36:0,-13.8615,-180.993	0/1:50:24,26:24:860:26:924:-68.4262,0,-62.6703	0/0:232:232,0:232:8244:0:0:0,-69.839,-741.972	0/1:144:74,70:74:2652:70:2508:-182.624,0,-195.578	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:231:230,1:230:8168:1:36:0,-65.9397,-731.538	0/1:155:71,84:71:2532:84:3003:-223.841,0,-181.472	0/1:53:32,21:32:1140:21:756:-52.4126,0,-86.9546	0/1:1078:538,540:538:19191:540:19225:-1405.3,0,-1402.24	0/1:710:379,331:379:13592:331:11755:-844.061,0,-1009.33	0/0:1196:1196,0:1196:42574:0:0:0,-360.032,-3830.26	0/1:1632:833,799:833:29653:799:28407:-2064.53,0,-2176.61	0/0:1213:1211,2:1211:43240:2:58:0,-359.641,-3884.64	0/0:73:73,0:73:2612:0:0:0,-21.9752,-235.328	0/1:187:76,111:76:2724:111:3975:-301.647,0,-189.11	0/0:90:90,0:90:3216:0:0:0,-27.0927,-289.663	0/0:620:618,2:618:22071:2:72:0,-179.802,-1978.99	0/0:102:100,2:100:3564:2:72:0,-23.8683,-314.133	0/1:79:39,40:39:1396:40:1406:-103.054,0,-102.158	0/1:144:68,76:68:2420:76:2707:-200.526,0,-174.708	0/1:10:7,3:7:248:3:108:-7.06487,0,-19.6539	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:96:96,0:96:3401:0:0:0,-28.8989,-306.306	0/0:102:102,0:102:3648:0:0:0,-30.7051,-328.525	0/1:147:82,65:82:2928:65:2300:-163.008,0,-219.499	0/1:73:33,40:33:1180:40:1419:-106.031,0,-84.5329	0/1:68:27,41:27:964:41:1467:-111.855,0,-66.6068	0/1:92:47,45:47:1676:45:1596:-116.234,0,-123.432	0/1:517:279,237:279:9959:237:8434:-603.375,0,-740.561	0/0:107:107,0:107:3828:0:0:0,-32.2102,-344.717	0/1:49:25,24:25:896:24:847:-61.7983,0,-66.2099	0/0:668:664,3:664:23622:3:108:0,-191.072,-2115.29	0/0:100:100,0:100:3576:0:0:0,-30.103,-322.048	0/1:51:26,25:26:932:25:865:-62.8102,0,-68.8463	0/0:484:484,0:484:17288:0:0:0,-145.699,-1555.56	0/1:442:233,207:233:8329:207:7340:-527.79,0,-616.597	0/1:50:28,22:28:1004:22:788:-56.1933,0,-75.6244	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.132	0/0:350:349,1:349:12450:1:36:0,-101.762,-1116.74	0/0:30:30,0:30:1068:0:0:0,-9.0309,-96.4321	0/1:156:67,89:67:2392:89:3165:-238.115,0,-168.577	0/0:18:18,0:18:625:0:0:0,-5.41854,-56.5725	0/0:72:72,0:72:2576:0:0:0,-21.6742,-232.09	0/0:150:150,0:150:5326:0:0:0,-45.1545,-479.475	0/0:119:118,1:118:4212:1:36:0,-32.2243,-375.664	0/0:102:102,0:102:3664:0:0:0,-30.7051,-329.958	0/0:33:32,1:32:1144:1:36:0,-6.33571,-99.6712	0/1:26:12,14:12:432:14:491:-36.6943,0,-31.3944	0/1:289:165,124:165:5847:124:4377:-307.111,0,-439.349	0/1:129:61,68:61:2176:68:2440:-181.022,0,-157.265	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/0:160:160,0:160:5716:0:0:0,-48.1648,-514.365	0/0:110:110,0:110:3940:0:0:0,-33.1133,-354.792	0/1:109:51,57:51:1824:57:2041:-151.091,0,-131.57	0/0:60:60,0:60:2133:0:0:0,-18.0618,-192.236	0/1:853:424,429:424:15105:429:15307:-1120.56,0,-1102.4	0/1:92:47,45:47:1688:45:1599:-116.505,0,-124.512	0/1:57:27,30:27:972:30:1056:-78.1908,0,-70.6392	0/0:215:215,0:215:7696:0:0:0,-64.7214,-692.674	0/0:40:40,0:40:1421:0:0:0,-12.0412,-128.185	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:13:5,8:5:172:8:288:-22.354,0,-11.9046	0/1:60:28,32:28:1000:32:1144:-85.2077,0,-72.2536	0/0:14:14,0:14:496:0:0:0,-4.21442,-44.9743	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.132	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/0:143:143,0:143:5108:0:0:0,-43.0473,-459.864	0/1:283:146,137:146:5224:137:4872:-353.442,0,-385.107	0/1:33:11,22:11:392:22:784:-60.9499,0,-25.6861	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944
chr04	30935353	.	ATCA	CTCT,CTCA	205229	PASS	AB=0.498103,0.497155;ABP=3.14209,3.30683;AC=142,46;AF=0.755319,0.244681;AN=188;AO=7397,2122;CIGAR=1X2M1X,1X3M;DP=9563;DPB=9564;DPRA=0,1.01734;EPP=15874.9,4602.19;EPPR=0;GTI=1;LEN=4,1;MEANALT=2,2.38596;MQM=59.934,59.9698;MQMR=0;NS=94;NUMALT=2;ODDS=1.59367;PAIRED=0,0;PAIREDR=0;PAO=2.5,1.5;PQA=86,54;PQR=0;PRO=0;QA=261489,75910;QR=0;RO=0;RPL=7376,2120;RPP=15883.5,4593.52;RPPR=0;RPR=21,2;RUN=1,1;SAF=7396,2121;SAP=16056.7,4602.19;SAR=1,1;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:67:0,43,24:0:0:43,24:1530,860:-195.189,-70.4971,-57.5528,-125.049,0,-117.824	1/1:97:0,97,0:0:0:97,0:3446,0:-310.355,-29.1999,0,-310.355,-29.1999,-310.355	1/1:155:0,155,0:0:0:155,0:5455,0:-491.083,-46.6597,0,-491.083,-46.6597,-491.083	1/1:191:0,190,0:0:0:190,0:6715,0:-604.011,-57.1957,0,-604.011,-57.1957,-604.011	1/2:50:0,27,23:0:0:27,23:956,828:-145.791,-67.9204,-59.7926,-78.2275,0,-71.3039	1/2:26:0,10,16:0:0:10,16:359,576:-76.6426,-47.3585,-44.3482,-29.6433,0,-24.8268	1/2:65:0,27,36:0:0:27,36:968,1292:-184.338,-105.387,-97.2591,-78.9501,0,-68.113	1/1:128:0,127,1:0:0:127,1:4462,36:-401.395,-38.2308,0,-398.458,-34.9336,-398.157	1/1:156:0,154,0:0:0:154,0:5413,0:-487.036,-46.3586,0,-487.036,-46.3586,-487.036	1/1:68:0,68,0:0:0:68,0:2377,0:-214.188,-20.47,0,-214.188,-20.47,-214.188	1/2:67:0,39,28:0:0:39,28:1378,1008:-194.828,-82.6075,-70.8673,-112.577,0,-104.148	1/2:168:0,82,86:0:0:82,86:2887,3057:-484.5,-249.471,-224.787,-235.382,0,-209.493	1/1:115:0,115,0:0:0:115,0:4073,0:-366.671,-34.6185,0,-366.671,-34.6185,-366.671	1/1:72:0,72,0:0:0:72,0:2573,0:-231.815,-21.6742,0,-231.815,-21.6742,-231.815	1/1:148:0,148,0:0:0:148,0:5242,0:-471.913,-44.5524,0,-471.913,-44.5524,-471.913	1/2:80:0,48,31:0:0:48,31:1694,1103:-227.829,-89.8882,-75.4387,-137.935,0,-128.604	1/2:36:0,18,18:0:0:18,18:647,648:-106.017,-53.2333,-47.8148,-53.1431,0,-47.7246	1/1:53:0,52,0:0:0:52,0:1851,0:-166.52,-15.6536,0,-166.52,-15.6536,-166.52	1/2:65:0,34,28:0:0:34,28:1222,1004:-181.58,-81.8873,-71.6523,-99.6922,0,-91.2634	1/2:150:0,70,80:0:0:70,80:2483,2861:-435.939,-233.645,-212.573,-202.65,0,-178.568	1/2:176:0,78,98:0:0:78,98:2761,3507:-511.235,-286.339,-262.859,-225.251,0,-195.75	1/2:102:0,44,57:0:0:44,57:1532,2048:-291.645,-167.073,-153.828,-124.565,0,-107.406	1/1:158:0,156,0:0:0:156,0:5496,0:-494.429,-46.9607,0,-494.429,-46.9607,-494.429	1/1:120:0,114,6:0:0:114,6:3993,216:-359.2,-34.3174,0,-341.575,-16.3331,-339.768	1/2:124:0,55,69:0:0:55,69:1948,2472:-360.324,-201.642,-185.086,-158.717,0,-137.946	1/1:219:0,219,0:0:0:219,0:7750,0:-697.541,-65.9256,0,-697.541,-65.9256,-697.541	1/2:346:0,175,169:0:0:175,169:6233,6040:-1000.53,-492.498,-439.818,-508.058,0,-457.184	1/1:42:0,42,0:0:0:42,0:1495,0:-134.844,-12.6433,0,-134.844,-12.6433,-134.844	1/1:188:0,181,2:0:0:181,2:6428,72:-578.271,-54.4864,0,-572.396,-48.603,-571.794	1/2:120:0,51,69:0:0:51,69:1804,2476:-349.255,-202.322,-186.97,-147.288,0,-126.517	1/2:134:0,65,68:0:0:65,68:2276,2415:-382.055,-196.872,-177.305,-185.283,0,-164.813	1/2:15:0,4,11:0:0:4,11:144,392:-44.0594,-32.3087,-31.1046,-12.1095,0,-8.79817	1/2:11:0,1,10:0:0:1,10:36,360:-32.6714,-29.734,-29.433,-3.29724,0,-0.286945	1/1:8:0,8,0:0:0:8,0:285,0:-25.9946,-2.40824,0,-25.9946,-2.40824,-25.9946	1/2:11:0,6,5:0:0:6,5:215,180:-32.5808,-15.0469,-13.2407,-17.893,0,-16.3878	1/1:18:0,18,0:0:0:18,0:644,0:-58.2906,-5.41854,0,-58.2906,-5.41854,-58.2906	1/2:184:0,112,72:0:0:112,72:3970,2576:-533.836,-210.415,-176.7,-323.777,0,-302.103	1/2:98:0,43,54:0:0:43,54:1530,1928:-281.873,-157.181,-144.237,-124.688,0,-108.433	1/1:75:0,75,0:0:0:75,0:2644,0:-238.206,-22.5773,0,-238.206,-22.5773,-238.206	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:73:0,71,2:0:0:71,2:2506,72:-225.432,-21.3731,0,-219.557,-15.1385,-218.955	1/2:34:0,27,7:0:0:27,7:960,252:-99.1514,-20.9217,-12.7939,-78.5886,0,-76.4813	1/2:161:0,85,74:0:0:85,74:2963,2656:-457.611,-216.65,-191.062,-240.956,0,-218.679	1/2:70:0,41,29:0:0:41,29:1454,1040:-203.629,-85.1845,-72.8423,-118.801,0,-110.071	1/1:88:0,84,0:0:0:84,0:2962,0:-266.484,-25.2865,0,-266.484,-25.2865,-266.484	1/1:114:0,113,0:0:0:113,0:3988,0:-358.841,-34.0164,0,-358.841,-34.0164,-358.841	1/1:110:0,107,0:0:0:107,0:3768,0:-338.913,-32.2102,0,-338.913,-32.2102,-338.913	1/2:169:0,108,61:0:0:108,61:3830,2188:-490.809,-178.778,-146.267,-312.389,0,-294.026	1/2:80:0,34,45:0:0:34,45:1197,1608:-228.548,-131.104,-120.869,-97.4384,0,-83.892	1/2:133:0,64,69:0:0:64,69:2252,2468:-384.92,-201.603,-182.337,-183.671,0,-162.9	1/2:71:0,26,45:0:0:26,45:927,1612:-207.388,-131.824,-123.997,-75.9217,0,-62.3754	1/2:18:0,11,7:0:0:11,7:390,252:-52.6912,-20.9217,-17.6104,-32.1271,0,-30.0199	1/1:157:0,157,0:0:0:157,0:5567,0:-501.158,-47.2617,0,-501.158,-47.2617,-501.158	1/2:68:0,37,29:0:0:37,29:1278,1034:-188.082,-84.3595,-73.2214,-103.788,0,-95.0584	1/2:11:0,8,3:0:0:8,3:281,104:-31.6739,-8.79971,-6.39147,-23.2219,0,-22.3188	1/1:136:0,136,0:0:0:136,0:4780,0:-430.348,-40.9401,0,-430.348,-40.9401,-430.348	1/2:38:0,9,28:0:0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chr04	31074494	.	CGA	TGC,TGT	206205	PASS	AB=0.555478,0.441479;ABP=117.214,130.086;AC=141,47;AF=0.75,0.25;AN=188;AO=7868,1905;CIGAR=1X1M1X,1X1M1X;DP=9804;DPB=9804;DPRA=0,1.11035;EPP=17088.2,4139.67;EPPR=5.18177;GTI=4;LEN=3,3;MEANALT=1.89362,2.24561;MQM=53.9394,59.6451;MQMR=60;NS=94;NUMALT=2;ODDS=2.61715;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=276366,67419;QR=36;RO=1;RPL=0,0;RPP=17088.2,4139.67;RPPR=5.18177;RPR=7868,1905;RUN=1,1;SAF=0,0;SAP=17088.2,4139.67;SAR=7868,1905;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:32:0,16,16:0:0:16,16:573,572:-93.2883,-46.8669,-42.0504,-46.7776,0,-41.9611	1/1:173:0,172,0:0:0:172,0:6019,0:-538.969,-51.7772,0,-538.969,-51.7772,-538.969	1/1:98:0,98,0:0:0:98,0:3427,0:-307.509,-29.5009,0,-307.509,-29.5009,-307.509	1/1:222:0,221,0:0:0:221,0:7712,0:-691.416,-66.5276,0,-691.416,-66.5276,-691.416	1/2:9:0,3,5:0:0:3,5:100,178:-22.5801,-14.5043,-13.6012,-8.0634,0,-6.55825	1/2:27:0,17,10:0:0:17,10:608,344:-77.5448,-28.2797,-23.1622,-49.6132,0,-46.6029	1/2:111:0,69,41:0:0:69,41:2435,1457:-316.481,-118.731,-97.9596,-197.753,0,-185.411	1/1:159:0,158,0:0:0:158,0:5586,0:-498.94,-47.5627,0,-498.94,-47.5627,-498.94	1/1:98:0,98,0:0:0:98,0:3424,0:-306.448,-29.5009,0,-306.448,-29.5009,-306.448	1/1:195:0,193,1:0:0:193,1:6767,36:-607.121,-58.0988,0,-604.184,-55.1612,-603.883	1/2:34:0,17,16:0:0:17,16:578,555:-91.3198,-45.1,-39.9825,-46.2028,0,-41.3864	1/2:70:0,40,30:0:0:40,30:1406,1047:-199.42,-85.5069,-73.4657,-114.263,0,-105.232	1/1:94:0,93,0:0:0:93,0:3278,0:-292.577,-27.9958,0,-292.577,-27.9958,-292.577	1/1:89:0,88,0:0:0:88,0:3087,0:-276.606,-26.4906,0,-276.606,-26.4906,-276.606	1/1:64:0,63,0:0:0:63,0:2165,0:-194.172,-18.9649,0,-194.172,-18.9649,-194.172	1/2:40:0,21,19:0:0:21,19:754,670:-116.302,-54.8943,-48.5726,-61.7628,0,-56.0433	1/2:70:0,31,39:0:0:31,39:1073,1337:-195.332,-108.884,-99.5517,-86.7917,0,-75.0516	1/1:77:0,77,0:0:0:77,0:2709,0:-242.458,-23.1793,0,-242.458,-23.1793,-242.458	1/2:35:0,12,23:0:0:12,23:424,819:-101.342,-67.0794,-63.4671,-34.6148,0,-27.6911	1/2:216:0,111,104:0:0:111,104:3892,3681:-615.052,-299.82,-266.406,-315.224,0,-283.917	1/2:220:0,102,118:0:0:102,118:3597,4192:-633.813,-341.86,-311.154,-292.306,0,-256.785	1/2:66:0,33,33:0:0:33,33:1167,1171:-190.727,-95.7614,-85.8274,-95.319,0,-85.385	1/1:40:0,40,0:0:0:40,0:1418,0:-127.744,-12.0412,0,-127.744,-12.0412,-127.744	1/2:87:0,78,9:0:0:78,9:2728,324:-248.159,-26.7919,-3.3116,-221.725,0,-219.016	1/2:53:0,33,20:0:0:33,20:1123,718:-149.747,-58.9149,-48.981,-91.1831,0,-85.1625	1/1:370:0,367,0:0:0:367,0:12942,0:-1161.52,-110.478,0,-1161.52,-110.478,-1161.52	1/2:211:0,117,94:0:0:117,94:4092,3320:-601.039,-270.666,-235.446,-330.723,0,-302.426	1/1:39:0,39,0:0:0:39,0:1328,0:-119.321,-11.7402,0,-119.321,-11.7402,-119.321	1/1:282:0,279,2:0:0:279,2:9840,72:-883.765,-83.9874,0,-877.891,-78.1125,-877.288	1/2:177:0,135,42:0:0:135,42:4776,1465:-507.582,-119.355,-78.7163,-388.576,0,-375.932	1/2:132:0,74,58:0:0:74,58:2599,2060:-379.194,-168.079,-145.803,-211.468,0,-194.008	1/2:6:0,1,5:0:0:1,5:36,178:-17.7969,-14.8635,-14.5625,-3.29214,0,-1.78699	1/2:8:0,5,3:0:0:5,3:171,106:-22.8196,-8.98601,-7.48086,-14.1822,0,-13.2791	1/1:7:0,7,0:0:0:7,0:252,0:-22.9711,-2.10721,0,-22.9711,-2.10721,-22.9711	1/2:5:0,1,4:0:0:1,4:24,144:-13.929,-12.1095,-11.8085,-2.08208,0,-0.877962	1/1:5:0,5,0:0:0:5,0:171,0:-15.6911,-1.50515,0,-15.6911,-1.50515,-15.6911	1/2:213:1,114,95:1:36:114,95:4019,3392:-600.067,-273.636,-242.256,-323.827,0,-298.167	1/2:175:0,100,75:0:0:100,75:3511,2646:-500.957,-215.796,-185.693,-285.512,0,-262.935	1/1:66:0,66,0:0:0:66,0:2293,0:-205.319,-19.868,0,-205.319,-19.868,-205.319	1/1:5:0,5,0:0:0:5,0:177,0:-15.931,-1.50515,0,-15.931,-1.50515,-15.931	1/1:186:0,183,3:0:0:183,3:6446,108:-576.644,-55.0885,0,-567.831,-45.9164,-566.928	1/2:54:0,32,22:0:0:32,22:1124,784:-155.495,-64.1553,-54.5224,-91.6929,0,-85.0703	1/2:100:0,60,40:0:0:60,40:2100,1401:-284.755,-114.334,-96.2722,-170.77,0,-158.729	1/2:62:0,41,21:0:0:41,21:1426,736:-176.092,-60.2377,-47.8955,-116.204,0,-109.882	1/1:55:0,55,0:0:0:55,0:1959,0:-176.132,-16.5567,0,-176.132,-16.5567,-176.132	1/1:83:0,81,1:0:0:81,1:2859,36:-256.985,-24.3834,0,-254.048,-21.3759,-253.747	1/1:106:0,106,0:0:0:106,0:3714,0:-332.932,-31.9092,0,-332.932,-31.9092,-332.932	1/2:205:0,132,72:0:0:132,72:4574,2571:-580.664,-209.615,-169.879,-371.053,0,-349.378	1/2:127:0,68,59:0:0:68,59:2396,2098:-365.509,-171.323,-150.853,-194.539,0,-176.778	1/2:242:0,154,88:0:0:154,88:5412,3125:-694.8,-254.891,-208.532,-440.262,0,-413.772	1/2:144:0,85,58:0:0:85,58:2995,2079:-413.117,-169.639,-144.051,-243.552,0,-226.092	1/2:23:0,20,3:0:0:20,3:710,106:-66.7528,-8.98601,-2.96541,-58.1201,0,-57.217	1/1:165:0,165,0:0:0:165,0:5704,0:-511.236,-49.67,0,-511.236,-49.67,-511.236	1/2:41:0,29,12:0:0:29,12:1021,422:-117.796,-34.7005,-25.9707,-83.4474,0,-79.835	1/2:29:0,17,12:0:0:17,12:596,432:-83.3992,-35.6065,-30.489,-48.1468,0,-44.5344	1/1:164:0,163,1:0:0:163,1:5724,36:-513.102,-49.0679,0,-510.164,-45.7706,-509.863	1/2:20:0,4,16: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chr04	31074502	.	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chr04	31101104	.	CGTTTCTTA	TGTTCTTA,TGTGCTTA	600344	PASS	AB=0.505735,0.487085;ABP=5.87434,17.5375;AC=142,46;AF=0.755319,0.244681;AN=188;AO=17273,4934;CIGAR=1X1M1D6M,1X1M1D1M1X4M;DP=22364;DPB=19882.4;DPRA=0,1.20787;EPP=37502.2,10708.4;EPPR=0;GTI=0;LEN=8,8;MEANALT=3.14894,3.47541;MQM=59.393,51.7671;MQMR=0;NS=94;NUMALT=2;ODDS=13.1072;PAIRED=0,0;PAIREDR=0;PAO=13.5,12.5;PQA=473,440;PQR=33;PRO=1;QA=606632,172277;QR=0;RO=0;RPL=9242,2531;RPP=187.374,10.221;RPPR=0;RPR=8031,2403;RUN=1,1;SAF=9241,2530;SAP=186.765,9.99739;SAR=8032,2404;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:101:0,63,38:0:0:63,38:2177,1328:-284.833,-107.978,-89.0133,-177.202,0,-165.763	1/1:292:0,289,0:0:0:289,0:10036,0:-902.474,-86.9977,0,-902.474,-86.9977,-902.474	1/1:316:0,315,1:0:0:315,1:11105,36:-998.383,-94.8245,0,-995.448,-91.5298,-995.147	1/1:538:0,534,3:0:0:534,3:18681,99:-1679.64,-160.75,0,-1671.73,-152.892,-1670.83	1/2:220:0,101,119:0:0:101,119:3568,4168:-627.586,-337.046,-306.642,-290.89,0,-255.068	1/2:171:0,91,80:0:0:91,80:3163,2834:-486.667,-229.762,-202.368,-257.255,0,-233.172	1/2:346:0,182,159:0:0:182,159:6435,5570:-972.878,-448.845,-394.057,-524.092,0,-476.228	1/1:434:0,428,0:0:0:428,0:14961,0:-1344.16,-128.841,0,-1344.16,-128.841,-1344.16	1/1:279:0,278,0:0:0:278,0:9695,0:-871.7,-83.6863,0,-871.7,-83.6863,-871.7	1/1:319:0,316,1:0:0:316,1:11133,36:-1001.07,-95.1255,0,-998.152,-92.1763,-997.851	1/2:144:0,73,71:0:0:73,71:2553,2471:-407.837,-200.206,-178.231,-207.979,0,-186.606	1/2:170:0,78,90:0:0:78,90:2722,3110:-472.698,-251.408,-227.928,-221.277,0,-194.185	1/1:141:0,139,1:0:0:139,1:4870,36:-437.689,-41.8432,0,-434.754,-38.8583,-434.453	1/1:167:0,162,1:0:0:162,1:5683,35:-511.148,-48.7669,0,-508.322,-45.9366,-508.021	1/1:135:0,133,0:0:0:133,0:4720,0:-424.532,-40.037,0,-424.532,-40.037,-424.532	1/2:139:0,80,57:0:0:80,57:2787,1999:-388.448,-161.858,-137.776,-226.618,0,-209.459	1/2:128:0,67,61:0:0:67,61:2305,2151:-361.504,-174.339,-154.17,-187.512,0,-169.149	1/1:125:0,125,0:0:0:125,0:4377,0:-393.874,-37.6288,0,-393.874,-37.6288,-393.874	1/2:111:0,55,55:0:0:55,55:1969,1870:-310.977,-150.452,-133.895,-160.513,0,-143.956	1/2:575:0,267,302:0:0:267,302:9513,10614:-1633.96,-859.028,-778.653,-774.954,0,-684.043	1/2:445:0,245,198:0:0:245,198:8589,6942:-1260.04,-561.612,-487.86,-698.486,0,-638.882	1/2:164:0,64,97:0:0:64,97:2281,3410:-462.145,-276.238,-256.972,-185.926,0,-156.726	1/1:217:0,211,5:0:0:211,5:7394,179:-665.044,-63.5173,0,-650.514,-48.8912,-649.009	1/1:393:0,378,14:0:0:378,14:13284,502:-1194.44,-113.789,0,-1153.65,-72.9775,-1149.43	1/2:184:0,104,80:0:0:104,80:3607,2743:-514.79,-221.999,-190.692,-293.135,0,-269.052	1/1:741:0,736,0:0:0:736,0:25838,0:-2323.54,-221.558,0,-2323.54,-221.558,-2323.54	1/2:472:0,238,230:0:0:238,230:8413,8019:-1333.01,-648.074,-576.429,-685.02,0,-615.783	1/1:74:0,74,0:0:0:74,0:2567,0:-231.199,-22.2762,0,-231.199,-22.2762,-231.199	1/1:704:0,699,1:0:0:699,1:24597,29:-2211.94,-210.42,0,-2209.65,-208.141,-2209.35	1/2:281:0,144,136:0:0:144,136:5094,4732:-796.793,-382.14,-338.791,-414.732,0,-373.792	1/2:293:0,131,161:0:0:131,161:4553,5567:-819.95,-449.85,-410.415,-370.176,0,-321.711	1/2:14:0,6,8:0:0:6,8:214,278:-40.2474,-22.8044,-20.9983,-17.748,0,-15.3398	1/2:53:0,29,23:0:0:29,23:1016,801:-147.603,-64.9662,-56.2363,-82.6265,0,-75.7028	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/2:14:0,7,7:0:0:7,7:241,245:-39.7531,-20.1819,-18.0747,-19.9175,0,-17.8103	1/1:14:0,14,0:0:0:14,0:502,0:-45.5172,-4.21442,0,-45.5172,-4.21442,-45.5172	1/2:435:0,233,200:0:0:233,200:8136,6919:-1221.26,-559.846,-489.706,-661.428,0,-601.222	1/2:331:0,184,146:0:0:184,146:6392,4989:-920.819,-401.425,-346.035,-519.377,0,-475.427	1/1:158:0,156,0:0:0:156,0:5471,0:-492.018,-46.9607,0,-492.018,-46.9607,-492.018	1/1:14:0,14,0:0:0:14,0:486,0:-44.0663,-4.21442,0,-44.0663,-4.21442,-44.0663	1/1:377:0,372,2:0:0:372,2:13042,72:-1172.62,-111.983,0,-1166.81,-106.173,-1166.2	1/2:94:0,52,42:0:0:52,42:1831,1478:-268.614,-119.621,-103.967,-149.343,0,-136.7	1/2:360:0,172,185:0:0:172,185:6069,6471:-1017.07,-523.316,-471.538,-493.774,0,-438.083	1/2:184:0,93,91:0:0:93,91:3208,3212:-521.286,-260.73,-232.735,-260.904,0,-233.51	1/1:110:0,110,0:0:0:110,0:3807,0:-342.709,-33.1133,0,-342.709,-33.1133,-342.709	1/1:278:0,276,0:0:0:276,0:9713,0:-873.408,-83.0843,0,-873.408,-83.0843,-873.408	1/1:249:0,247,0:0:0:247,0:8703,0:-782.148,-74.3544,0,-782.148,-74.3544,-782.148	1/2:387:0,186,198:0:0:186,198:6567,6895:-1093.1,-558.418,-502.426,-534.747,0,-475.143	1/2:258:0,131,125:0:0:131,125:4595,4386:-729.511,-355.704,-316.269,-373.798,0,-336.169	1/2:317:0,157,158:0:0:157,158:5523,5576:-901.45,-451.95,-404.688,-449.62,0,-402.057	1/2:496:0,268,222:0:0:268,222:9453,7739:-1396.36,-626.979,-546.303,-769.387,0,-702.558	1/2:17:0,11,6:0:0:11,6:380,215:-48.7467,-17.8808,-14.5695,-31.2194,0,-29.4132	1/1:363:0,362,1:0:0:362,1:12825,33:-1153.15,-108.973,0,-1150.49,-105.987,-1150.19	1/2:143:0,89,52:0:0:89,52:3131,1835:-403.882,-149.048,-122.256,-254.898,0,-239.245	1/2:58:0,30,28:0:0:30,28:1074,976:-166.77,-79.5666,-70.5357,-87.5555,0,-79.1267	1/1:380:0,378,0:0:0:378,0:13315,0:-1197.45,-113.789,0,-1197.45,-113.789,-1197.45	1/2:102:0,55,46:0:0:55,46:1950,1594:-287.214,-128.367,-111.811,-158.895,0,-145.047	1/1:10:0,10,0:0:0:10,0:342,0:-31.1094,-3.0103,0,-31.1094,-3.0103,-31.1094	1/2:55:0,15,40:0:0:15,40:536,1399:-157.558,-113.866,-109.35,-44.0469,0,-32.0057	1/2:225:0,120,103:0:0:120,103:4223,3569:-631.129,-287.406,-251.282,-343.712,0,-312.706	1/1:189:0,186,2:0:0:186,2:6487,71:-583.492,-55.9916,0,-577.709,-50.1795,-577.107	1/1:8:0,8,0:0:0:8,0:283,0:-25.8122,-2.40824,0,-25.8122,-2.40824,-25.8122	1/1:385:0,381,0:0:0:381,0:13484,0:-1212.8,-114.692,0,-1212.8,-114.692,-1212.8	1/2:471:0,259,208:0:0:259,208:9123,7262:-1330.45,-587.841,-509.874,-742.642,0,-680.027	1/1:218:0,208,9:0:0:208,9:7341,310:-660.253,-62.6142,0,-635.173,-37.4587,-632.464	1/1:184:0,180,0:0:0:180,0:6225,0:-559.748,-54.1854,0,-559.748,-54.1854,-559.748	1/1:444:0,438,3:0:0:438,3:15327,106:-1378.41,-131.851,0,-1369.79,-123.22,-1368.89	1/1:318:0,313,4:0:0:313,4:10983,143:-987.883,-94.2224,0,-976.29,-82.6488,-975.085	1/1:55:0,54,0:0:0:54,0:1895,0:-170.407,-16.2556,0,-170.407,-16.2556,-170.407	1/1:226:0,225,0:0:0:225,0:7867,0:-707.309,-67.7318,0,-707.309,-67.7318,-707.309	1/2:149:0,72,75:0:0:72,75:2522,2611:-416.703,-211.539,-189.865,-205.165,0,-182.587	1/2:66:0,31,35:0:0:31,35:1090,1235:-189.383,-100.679,-91.347,-89.0554,0,-78.5194	1/2:143:0,62,81:0:0:62,81:2170,2810:-403.846,-227.346,-208.682,-176.848,0,-152.465	1/1:167:0,165,0:0:0:165,0:5786,0:-520.342,-49.67,0,-520.342,-49.67,-520.342	1/1:543:0,538,0:0:0:538,0:18907,0:-1700.58,-161.954,0,-1700.58,-161.954,-1700.58	1/1:436:0,432,0:0:0:432,0:15148,0:-1362.38,-130.045,0,-1362.38,-130.045,-1362.38	1/2:293:0,136,156:0:0:136,156:4769,5409:-825.561,-437.728,-396.788,-387.851,0,-340.89	1/1:210:0,210,0:0:0:210,0:7353,0:-661.736,-63.2163,0,-661.736,-63.2163,-661.736	1/2:24:0,8,16:0:0:8,16:277,568:-68.285,-45.7757,-43.3674,-22.8564,0,-18.0399	1/2:275:0,151,120:0:0:151,120:5331,4232:-776.304,-342.568,-297.113,-433.817,0,-397.694	1/2:291:0,164,125:0:0:164,125:5789,4409:-828.149,-357.279,-307.91,-470.926,0,-433.297	1/1:715:0,709,2:0:0:709,2:25111,71:-2258.68,-213.43,0,-2252.93,-207.664,-2252.33	1/1:202:0,202,0:0:0:202,0:7053,0:-634.446,-60.8081,0,-634.446,-60.8081,-634.446	1/1:144:0,140,0:0:0:140,0:4943,0:-444.615,-42.1442,0,-444.615,-42.1442,-444.615	1/2:188:0,96,92:0:0:96,92:3333,3199:-530.008,-259.083,-230.185,-271.271,0,-243.576	1/2:318:0,148,164:0:0:148,164:5116,5751:-881.242,-465.862,-421.31,-415.393,0,-366.024	1/1:77:0,77,0:0:0:77,0:2738,0:-246.612,-23.1793,0,-246.612,-23.1793,-246.612	1/1:165:0,165,0:0:0:165,0:5774,0:-519.514,-49.67,0,-519.514,-49.67,-519.514	1/1:155:0,155,0:0:0:155,0:5422,0:-487.969,-46.6597,0,-487.969,-46.6597,-487.969	1/1:113:0,109,0:0:0:109,0:3873,0:-348.403,-32.8123,0,-348.403,-32.8123,-348.403	1/2:170:0,82,87:0:0:82,87:2847,3054:-478.323,-246.915,-222.231,-231.396,0,-205.206	1/2:152:0,41,111:0:0:41,111:1443,3874:-431.18,-313.709,-301.366,-117.822,0,-84.4076	1/1:315:0,311,0:0:0:311,0:10928,0:-983.005,-93.6203,0,-983.005,-93.6203,-983.005	1/1:235:0,235,0:0:0:235,0:8299,0:-746.793,-70.7421,0,-746.793,-70.7421,-746.793
chr04	31201601	.	G	A	212124	PASS	AB=0.429949;ABP=285.943;AC=142;AF=0.755319;AN=188;AO=10117;CIGAR=1X;DP=13933;DPB=13933;DPRA=0;EPP=21971.8;EPPR=8276.32;GTI=2;LEN=1;MEANALT=1.02128;MQM=59.9947;MQMR=59.9979;NS=94;NUMALT=1;ODDS=0.190023;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=360940;QR=136491;RO=3814;RPL=10117;RPP=21971.8;RPPR=8285.01;RPR=0;RUN=1;SAF=10117;SAP=21971.8;SAR=0;SRF=3813;SRP=8276.32;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:56:29,27:29:1023:27:960:-69.8586,0,-75.5241	1/1:256:0,256:0:0:256:9151:-823.562,-77.0637,0	1/1:189:0,189:0:0:189:6769:-609.282,-56.8947,0	1/1:274:0,274:0:0:274:9786:-880.687,-82.4822,0	0/1:144:93,51:93:3328:51:1824:-121.093,0,-256.39	0/1:96:65,31:65:2327:31:1108:-71.1321,0,-180.79	0/1:184:101,83:101:3601:83:2936:-209.082,0,-268.906	1/1:217:0,217:0:0:217:7769:-699.239,-65.3235,0	1/1:179:0,179:0:0:179:6399:-576,-53.8844,0	1/1:141:0,141:0:0:141:5047:-454.376,-42.4452,0	0/1:59:30,29:30:1076:29:1032:-75.4327,0,-79.3921	0/1:90:46,44:46:1656:44:1575:-114.948,0,-122.236	1/1:104:0,104:0:0:104:3707:-333.833,-31.3071,0	1/1:90:1,89:1:36:89:3184:-283.186,-23.4944,0	1/1:84:0,84:0:0:84:2985:-268.882,-25.2865,0	0/1:98:46,52:46:1641:52:1829:-135.388,0,-118.476	0/1:81:45,36:45:1607:36:1266:-89.8571,0,-120.536	1/1:79:0,79:0:0:79:2811:-253.23,-23.7814,0	0/1:66:33,33:33:1180:33:1176:-86.2798,0,-86.6401	0/1:457:248,209:248:8884:209:7473:-535.042,0,-661.97	0/1:192:110,82:110:3924:82:2919:-205.147,0,-295.554	0/1:213:142,71:142:5100:71:2524:-163.293,0,-395.022	1/1:148:0,148:0:0:148:5241:-471.83,-44.5524,0	1/1:170:12,158:12:432:158:5649:-469.308,-11.9539,0	0/1:164:96,68:96:3448:68:2432:-169.767,0,-261.163	1/1:478:1,477:1:36:477:17013:-1527.22,-140.294,0	0/1:260:165,95:165:5924:95:3366:-224.887,0,-454.999	1/1:59:0,59:0:0:59:2112:-190.349,-17.7608,0	1/1:383:1,381:1:36:381:13636:-1223.43,-111.755,0	0/1:222:112,110:112:4000:110:3913:-285.535,0,-293.359	0/1:197:113,84:113:4060:84:3004:-211.289,0,-306.283	0/1:12:6,6:6:212:6:216:-16.1782,0,-15.8124	0/1:33:24,9:24:860:9:324:-19.5719,0,-67.7878	1/1:6:0,6:0:0:6:208:-19.0591,-1.80618,0	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:260:150,110:150:5353:110:3944:-276.884,0,-403.635	0/1:377:242,135:242:8628:135:4836:-321.906,0,-663.018	1/1:77:0,77:0:0:77:2764:-249.001,-23.1793,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:234:3,231:3:108:231:8271:-734.324,-60.3659,0	0/1:50:30,20:30:1080:20:716:-49.7162,0,-82.4618	0/1:193:102,91:102:3637:91:3235:-233.271,0,-269.435	0/1:111:59,52:59:2111:52:1856:-133.905,0,-156.844	1/1:91:0,91:0:0:91:3229:-290.832,-27.3937,0	1/1:195:0,195:0:0:195:6936:-624.277,-58.7009,0	1/1:175:0,175:0:0:175:6256:-563.133,-52.6803,0	0/1:316:184,132:184:6591:132:4697:-327.766,0,-498.144	0/1:119:62,57:62:2213:57:2028:-146.97,0,-163.61	0/1:222:126,96:126:4528:96:3424:-241.546,0,-340.857	0/1:334:175,159:175:6255:159:5650:-408.078,0,-462.501	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	1/1:231:0,231:0:0:231:8252:-742.693,-69.5379,0	0/1:86:47,39:47:1669:39:1396:-100.051,0,-124.607	0/1:18:10,8:10:360:8:284:-20.4848,0,-27.3258	1/1:173:0,173:0:0:173:6128:-551.626,-52.0782,0	0/1:80:52,28:52:1872:28:991:-65.4211,0,-144.677	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:36:29,7:29:1029:7:252:-12.1919,0,-82.0841	0/1:146:77,69:77:2764:69:2451:-176.895,0,-205.051	1/1:153:0,153:0:0:153:5464:-491.89,-46.0576,0	1/1:15:0,15:0:0:15:516:-46.7634,-4.51545,0	1/1:263:0,263:0:0:263:9399:-845.871,-79.1709,0	0/1:358:219,139:219:7841:139:4965:-339.23,0,-597.944	1/1:103:3,100:3:108:100:3575:-311.882,-20.9309,0	1/1:152:0,152:0:0:152:5437:-489.458,-45.7566,0	1/1:274:0,274:0:0:274:9772:-879.43,-82.4822,0	1/1:210:8,202:8:288:202:7208:-622.507,-36.9489,0	1/1:26:0,26:0:0:26:919:-83.0262,-7.82678,0	1/1:127:0,127:0:0:127:4511:-406.158,-38.2308,0	0/1:78:39,39:39:1404:39:1384:-101.378,0,-103.179	0/1:21:12,9:12:432:9:320:-22.8207,0,-32.8996	0/1:154:90,64:90:3216:64:2284:-159.463,0,-243.304	1/1:93:1,92:1:36:92:3266:-290.564,-24.3975,0	1/1:245:0,245:0:0:245:8739:-786.503,-73.7524,0	1/1:206:0,206:0:0:206:7378:-664.067,-62.0122,0	0/1:156:78,78:78:2800:78:2781:-203.569,0,-205.279	1/1:145:1,144:1:36:144:5099:-455.456,-40.0511,0	0/1:21:6,15:6:216:15:540:-42.6149,0,-13.4689	0/1:201:108,93:108:3876:93:3285:-235.364,0,-288.527	0/1:175:107,68:107:3836:68:2444:-167.534,0,-292.756	1/1:375:0,375:0:0:375:13415:-1207.14,-112.886,0	1/1:122:0,122:0:0:122:4358:-392.395,-36.7257,0	1/1:84:0,84:0:0:84:3008:-270.951,-25.2865,0	0/1:107:59,48:59:2112:48:1712:-122.156,0,-158.139	0/1:165:82,82:82:2923:82:2880:-209.709,0,-213.576	1/1:63:0,63:0:0:63:2251:-202.853,-18.9649,0	1/1:117:0,117:0:0:117:4179:-376.292,-35.2205,0	1/1:88:0,88:0:0:88:3131:-282.017,-26.4906,0	1/1:41:0,41:0:0:41:1460:-131.696,-12.3422,0	0/1:96:45,51:45:1596:51:1823:-135.452,0,-115.031	0/1:107:73,34:73:2606:34:1224:-78.2568,0,-202.577	1/1:202:0,202:0:0:202:7209:-648.866,-60.8081,0	1/1:126:0,126:0:0:126:4520:-406.967,-37.9298,0
chr04	31269987	.	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chr04	31291131	.	A	C	40856	PASS	AB=0.487382;ABP=10.0248;AC=47;AF=0.25;AN=188;AO=2500;CIGAR=1X;DP=10837;DPB=10837;DPRA=1.0418;EPP=5423.01;EPPR=18009;GTI=3;LEN=1;MEANALT=1.04918;MQM=59.9032;MQMR=59.9974;NS=94;NUMALT=1;ODDS=0.455853;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88724;QR=296836;RO=8332;RPL=1;RPP=5423.01;RPPR=18009;RPR=2499;RUN=1;SAF=0;SAP=5431.69;SAR=2500;SRF=0;SRP=18095.7;SRR=8332;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:85:36,49:36:1280:49:1719:-129.396,0,-89.9157	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/0:180:180,0:180:6369:0:0:0,-54.1854,-573.302	0/0:233:233,0:233:8312:0:0:0,-70.14,-748.09	0/1:116:56,60:56:2004:60:2143:-158.218,0,-145.708	0/1:45:23,22:23:824:22:788:-57.6984,0,-60.937	0/1:99:45,54:45:1607:54:1891:-140.659,0,-115.117	0/0:318:317,1:317:11291:1:36:0,-92.1293,-1012.47	0/0:187:185,2:185:6570:2:72:0,-49.4559,-584.542	0/0:137:136,1:136:4858:1:32:0,-38.0418,-434.174	0/1:41:26,15:26:936:15:532:-35.8709,0,-72.2172	0/1:96:35,61:35:1219:61:2145:-164.412,0,-81.111	0/0:77:77,0:77:2703:0:0:0,-23.1793,-243.511	0/0:60:60,0:60:2129:0:0:0,-18.0618,-191.877	0/0:73:73,0:73:2587:0:0:0,-21.9752,-233.077	0/1:56:28,28:28:1000:28:1004:-73.8182,0,-73.4577	0/1:45:20,25:20:720:25:878:-65.7813,0,-51.5824	0/0:37:37,0:37:1308:0:0:0,-11.1381,-118.019	0/1:21:12,9:12:432:9:316:-22.4572,0,-32.8996	0/1:216:111,104:111:3953:104:3716:-269.648,0,-290.969	0/1:216:115,101:115:4080:101:3590:-258.095,0,-302.362	0/1:183:66,117:66:2347:117:4184:-321.523,0,-156.401	0/0:111:110,1:110:3948:1:36:0,-29.8161,-351.912	0/0:73:69,4:69:2475:4:140:0,-9.03061,-210.058	0/1:90:65,25:65:2318:25:885:-52.8677,0,-181.786	0/0:236:236,0:236:8444:0:0:0,-71.0431,-759.961	0/1:292:147,145:147:5271:145:5166:-377.17,0,-386.624	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:345:344,0:344:12317:0:0:0,-103.554,-1108.01	0/1:202:92,110:92:3287:110:3931:-293.172,0,-235.241	0/1:271:129,142:129:4578:142:5060:-373.966,0,-330.607	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/1:7:4,3:4:144:3:93:-6.56952,0,-11.2064	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/1:203:100,103:100:3570:103:3650:-267.597,0,-260.398	0/1:212:117,95:117:4134:95:3357:-238.523,0,-308.427	0/0:52:52,0:52:1847:0:0:0,-15.6536,-166.509	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:156:151,5:151:5377:5:180:0,-30.4086,-467.511	0/1:39:23,16:23:828:16:555:-38.5359,0,-63.1039	0/1:314:170,144:170:6032:144:5107:-365.252,0,-448.462	0/1:60:28,32:28:1004:32:1139:-84.7572,0,-72.6141	0/1:45:24,21:24:855:21:736:-53.0155,0,-63.7238	0/0:113:112,1:112:4007:1:36:0,-30.4181,-357.218	0/0:204:204,0:204:7285:0:0:0,-61.4101,-655.702	0/1:141:64,77:64:2273:77:2717:-202.329,0,-162.385	0/1:122:61,61:61:2172:61:2162:-158.12,0,-159.021	0/1:179:98,81:98:3512:81:2895:-206.901,0,-262.405	0/1:99:50,49:50:1792:49:1748:-127.802,0,-131.76	0/1:17:7,10:7:252:10:356:-27.2637,0,-17.9114	0/0:111:111,0:111:3984:0:0:0,-33.4143,-358.749	0/1:108:64,44:64:2274:44:1567:-108.809,0,-172.41	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	0/0:201:199,2:199:7042:2:68:0,-54.0493,-627.388	0/0:56:55,1:55:1980:1:36:0,-13.2594,-174.876	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:4:3,1:3:104:1:36:-2.39415,0,-8.49869	0/1:68:41,27:41:1449:27:956:-65.8857,0,-110.234	0/0:87:87,0:87:3101:0:0:0,-26.1896,-279.316	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:309:309,0:309:10999:0:0:0,-93.0183,-989.809	0/1:300:149,151:149:5246:151:5403:-396.091,0,-381.972	0/0:84:78,6:78:2776:6:208:0,-6.22744,-231.02	0/0:75:75,0:75:2656:0:0:0,-22.5772,-239.285	0/0:284:283,1:283:10059:1:36:0,-81.8942,-901.651	0/0:200:199,1:199:7092:1:36:0,-56.6077,-634.743	0/0:27:26,1:26:921:1:36:0,-4.52953,-79.6069	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/1:30:17,13:17:612:13:468:-33.4287,0,-46.3825	0/1:17:10,7:10:356:7:243:-17.0778,0,-27.2637	0/1:115:60,55:60:2152:55:1932:-139.536,0,-159.329	0/0:80:80,0:80:2854:0:0:0,-24.0824,-257.097	0/0:243:243,0:243:8630:0:0:0,-73.1503,-776.698	0/0:194:194,0:194:6912:0:0:0,-58.3998,-622.149	0/1:117:82,35:82:2920:35:1243:-76.9534,0,-227.813	0/0:114:113,1:113:4023:1:32:0,-31.1181,-359.058	0/1:15:2,13:2:72:13:449:-36.222,0,-2.32127	0/1:169:85,83:85:3052:83:2952:-215.065,0,-224.105	0/1:249:148,99:148:5284:99:3507:-241.199,0,-401.054	0/0:299:299,0:299:10688:0:0:0,-90.008,-961.828	0/0:63:63,0:63:2232:0:0:0,-18.9649,-201.142	0/0:67:67,0:67:2391:0:0:0,-20.169,-215.447	0/1:46:19,27:19:680:27:951:-72.0569,0,-47.6818	0/1:139:78,61:78:2792:61:2153:-152.133,0,-209.677	0/0:28:28,0:28:987:0:0:0,-8.42884,-89.143	0/0:78:78,0:78:2755:0:0:0,-23.4803,-248.191	0/0:71:71,0:71:2510:0:0:0,-21.3731,-226.152	0/0:25:25,0:25:872:0:0:0,-7.52575,-78.7936	0/1:58:31,27:31:1099:27:935:-66.9937,0,-81.7597	0/1:90:31,59:31:1112:59:2086:-160.916,0,-73.2986	0/0:179:179,0:179:6358:0:0:0,-53.8844,-572.313	0/0:98:98,0:98:3515:0:0:0,-29.5009,-316.559
chr04	31291140	.	T	C	42813.8	PASS	AB=0.484926;ABP=13.0265;AC=47;AF=0.25;AN=188;AO=2488;CIGAR=1X;DP=10931;DPB=10931;DPRA=1.05401;EPP=4963.41;EPPR=16064.4;GTI=3;LEN=1;MEANALT=1.01667;MQM=59.9088;MQMR=59.9946;NS=94;NUMALT=1;ODDS=0.690525;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88544;QR=300746;RO=8442;RPL=2436;RPP=4963.41;RPPR=16064.4;RPR=52;RUN=1;SAF=0;SAP=5405.63;SAR=2488;SRF=0;SRP=18334.6;SRR=8442;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:87:37,50:37:1297:50:1780:-134.285,0,-90.8395	0/0:74:74,0:74:2636:0:0:0,-22.2762,-237.488	0/0:184:184,0:184:6557:0:0:0,-55.3895,-590.214	0/0:240:240,0:240:8548:0:0:0,-72.2472,-769.325	0/1:115:56,59:56:2008:59:2116:-156.09,0,-146.369	0/1:47:24,23:24:864:23:824:-60.3349,0,-63.9342	0/1:97:44,53:44:1553:53:1900:-142.078,0,-110.86	0/0:323:322,1:322:11470:1:36:0,-93.6344,-1028.58	0/0:189:187,2:187:6672:2:72:0,-50.0579,-593.72	0/0:136:135,1:135:4805:1:36:0,-37.3418,-429.009	0/1:40:25,15:25:896:15:540:-36.8953,0,-68.9192	0/1:93:35,58:35:1260:58:2057:-157.402,0,-85.7097	0/0:77:77,0:77:2756:0:0:0,-23.1793,-248.282	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.901	0/0:72:72,0:72:2555:0:0:0,-21.6742,-230.201	0/1:59:29,30:29:1040:30:1067:-78.5804,0,-76.1536	0/1:45:20,25:20:716:25:900:-67.7665,0,-51.2214	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/1:21:12,9:12:432:9:309:-21.8191,0,-32.8996	0/1:218:114,104:114:4048:104:3667:-264.609,0,-298.886	0/1:221:117,104:117:4148:104:3676:-264.484,0,-306.98	0/1:184:65,119:65:2312:119:4219:-324.481,0,-152.952	0/0:112:111,1:111:3964:1:36:0,-30.1171,-353.354	0/0:73:68,4:68:2416:4:144:0,-8.72037,-204.383	0/1:94:67,27:67:2404:27:964:-58.7782,0,-188.32	0/0:236:236,0:236:8371:0:0:0,-71.0431,-753.401	0/1:291:148,143:148:5259:143:5120:-373.333,0,-385.851	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/0:350:350,0:350:12423:0:0:0,-105.36,-1117.92	0/1:203:91,112:91:3256:112:3965:-295.93,0,-232.152	0/1:271:130,141:130:4640:141:5013:-369.739,0,-336.185	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	0/1:7:4,3:4:144:3:93:-6.56952,0,-11.2064	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5581	0/1:204:102,102:102:3644:102:3656:-267.834,0,-266.755	0/1:219:121,98:121:4315:98:3454:-245.142,0,-322.602	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.638	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:156:151,5:151:5392:5:176:0,-30.7757,-469.228	0/1:38:23,15:23:828:15:536:-37.1357,0,-63.405	0/1:316:171,145:171:6093:145:5147:-368.246,0,-453.348	0/1:58:27,31:27:972:31:1103:-82.1201,0,-70.3382	0/1:48:26,22:26:932:22:775:-55.6185,0,-69.7494	0/0:119:118,1:118:4220:1:36:0,-32.2243,-376.38	0/0:206:206,0:206:7320:0:0:0,-62.0122,-658.855	0/1:143:67,76:67:2396:76:2694:-199.657,0,-172.85	0/1:116:59,57:59:2096:57:2029:-147.961,0,-153.991	0/1:177:97,80:97:3445:80:2830:-201.656,0,-256.981	0/1:99:51,48:51:1820:48:1720:-125.284,0,-134.279	0/1:16:6,10:6:216:10:360:-27.9278,0,-14.974	0/0:111:111,0:111:3884:0:0:0,-33.4143,-349.756	0/1:106:64,42:64:2266:42:1489:-102.392,0,-172.29	0/1:10:8,2:8:276:2:72:-3.82642,0,-22.1649	0/0:208:206,2:206:7338:2:72:0,-55.7775,-653.634	0/0:55:55,0:55:1960:0:0:0,-16.5566,-176.675	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:6:3,3:3:108:3:100:-7.52426,0,-8.26899	0/1:69:41,28:41:1460:28:1008:-70.2369,0,-110.925	0/0:88:88,0:88:3152:0:0:0,-26.4906,-283.905	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:312:312,0:312:11074:0:0:0,-93.9214,-996.562	0/1:298:148,150:148:5273:150:5360:-392.824,0,-385	0/0:88:82,6:82:2916:6:216:0,-6.70013,-242.886	0/0:77:77,0:77:2744:0:0:0,-23.1793,-247.202	0/0:284:283,1:283:10088:1:36:0,-81.8942,-904.262	0/0:201:200,1:200:7114:1:36:0,-56.9088,-636.723	0/0:27:26,1:26:924:1:36:0,-4.52953,-79.8794	0/0:53:53,0:53:1892:0:0:0,-15.9546,-170.558	0/1:32:17,15:17:612:15:536:-38.9419,0,-45.7805	0/1:18:11,7:11:392:7:243:-16.7768,0,-30.2015	0/1:114:59,55:59:2100:55:1954:-141.817,0,-154.952	0/0:82:82,0:82:2912:0:0:0,-24.6845,-262.317	0/0:245:245,0:245:8752:0:0:0,-73.7523,-787.673	0/0:199:199,0:199:7054:0:0:0,-59.905,-634.927	0/1:120:86,34:86:3072:34:1220:-73.9832,0,-240.586	0/0:118:117,1:117:4160:1:36:0,-31.9233,-370.988	0/1:15:2,13:2:72:13:464:-37.5821,0,-2.32127	0/1:166:86,80:86:3011:80:2855:-207.208,0,-221.245	0/1:243:146,97:146:5198:97:3464:-238.821,0,-394.808	0/0:302:302,0:302:10793:0:0:0,-90.9111,-971.275	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.663	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.453	0/1:44:19,25:19:684:25:886:-66.8127,0,-48.645	0/1:137:80,57:80:2848:57:2039:-142.481,0,-215.318	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:84:84,0:84:3000:0:0:0,-25.2865,-270.232	0/0:70:70,0:70:2501:0:0:0,-21.0721,-225.341	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:58:32,26:32:1144:26:932:-66.6941,0,-85.8098	0/1:86:28,58:28:1008:58:2080:-161.582,0,-65.1478	0/0:189:189,0:189:6729:0:0:0,-56.8947,-605.688	0/0:99:99,0:99:3544:0:0:0,-29.802,-319.169
chr04	31427072	.	C	T	1.6787e-11	PASS	AB=0.501949;ABP=3.62829;AC=97;AF=0.515957;AN=188;AO=9452;CIGAR=1X;DP=18814;DPB=18814;DPRA=0;EPP=20527.8;EPPR=20315;GTI=97;LEN=1;MEANALT=1.08511;MQM=10.6979;MQMR=11.4093;NS=94;NUMALT=1;ODDS=29.1734;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=330432;QR=331998;RO=9354;RPL=1;RPP=20519.1;RPPR=20288.9;RPR=9451;RUN=1;SAF=1;SAP=20519.1;SAR=9451;SRF=3;SRP=20288.9;SRR=9351;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:82:31,51:31:1103:51:1777:-25.6513,0,-7.51941	0/1:441:202,239:202:7164:239:8420:-90.5348,0,-60.2282	0/1:292:155,136:155:5492:136:4733:-38.2767,0,-59.7417	0/1:496:266,230:266:9432:230:7989:-59.7934,0,-100.856	0/1:169:84,85:84:3000:85:2935:-30.1456,0,-28.1567	0/1:115:50,64:50:1772:64:2256:-27.5409,0,-13.4365	0/1:231:92,139:92:3288:139:4860:-59.4393,0,-18.0469	0/1:333:118,215:118:4137:215:7510:-95.0547,0,-22.1926	0/1:206:82,124:82:2895:124:4262:-49.4683,0,-14.1115	0/1:126:75,51:75:2650:51:1795:-15.5272,0,-36.5853	0/1:120:61,59:61:2170:59:2095:-17.099,0,-23.4948	0/1:174:95,79:95:3336:79:2762:-26.6328,0,-42.8649	0/1:140:75,65:75:2657:65:2290:-16.3755,0,-34.3788	0/1:129:65,64:65:2297:64:2208:-18.7662,0,-29.0393	0/1:131:70,61:70:2467:61:2106:-17.8186,0,-24.572	0/1:111:44,67:44:1528:67:2341:-29.7665,0,-10.8061	0/1:149:82,67:82:2931:67:2340:-18.8612,0,-35.1697	0/1:119:60,59:60:2143:59:2070:-17.3011,0,-25.2466	0/1:89:46,43:46:1635:43:1483:-13.1039,0,-16.3643	0/1:435:210,225:210:7491:225:7905:-78.7383,0,-76.9385	0/1:331:187,144:187:6598:144:5055:-36.5257,0,-94.9207	0/1:167:62,105:62:2207:105:3661:-44.3656,0,-9.89042	0/1:303:176,126:176:6278:126:4419:-24.3067,0,-75.844	0/1:201:85,116:85:3044:116:4056:-46.5387,0,-18.6245	0/1:126:74,52:74:2632:52:1838:-13.4974,0,-37.8803	0/1:553:324,229:324:11548:229:7985:-46.0588,0,-147.298	0/1:454:248,206:248:8850:206:7192:-62.5557,0,-104.813	0/1:78:50,28:50:1763:28:966:-1.77464,0,-23.546	0/1:540:283,257:283:10065:257:8948:-81.4351,0,-108.325	0/1:228:125,102:125:4471:102:3560:-28.9559,0,-54.0094	0/1:225:105,120:105:3652:120:4208:-49.1491,0,-31.3447	0/1:18:8,10:8:271:10:351:-4.11837,0,-3.60554	0/1:37:10,27:10:351:27:944:-16.7479,0,-0.584378	0/1:16:5,11:5:172:11:392:-5.17237,0,-1.71306	1/1:22:7,15:7:248:15:532:-8.18575,-0.230288,0	0/1:37:20,17:20:712:17:591:-4.23666,0,-9.29379	0/1:406:193,213:193:6793:213:7448:-81.1415,0,-55.6232	0/1:263:124,139:124:4417:139:4858:-56.097,0,-39.2382	0/1:128:64,64:64:2292:64:2253:-19.0853,0,-21.451	1/1:8:1,7:1:36:7:248:-5.39335,-1.40922,0	0/1:331:191,140:191:6791:140:4904:-28.8884,0,-76.883	0/1:92:41,51:41:1419:51:1782:-19.9399,0,-15.7524	0/1:403:201,202:201:7131:202:7023:-73.6537,0,-85.5448	0/1:171:82,89:82:2893:89:3125:-31.3106,0,-24.7586	0/1:117:69,48:69:2439:48:1643:-8.16425,0,-29.4229	0/1:186:105,81:105:3708:81:2850:-19.2512,0,-40.4511	0/1:155:93,62:93:3303:62:2183:-9.16611,0,-39.3557	0/1:388:181,207:181:6448:207:7257:-72.0392,0,-51.1234	0/1:174:87,87:87:3067:87:3033:-32.3076,0,-35.2579	0/1:485:200,285:200:7139:285:10034:-113.304,0,-42.9948	0/1:290:149,141:149:5293:141:4933:-39.6093,0,-59.1593	0/1:20:7,13:7:248:13:456:-5.7638,0,-0.371772	0/1:248:126,122:126:4495:122:4260:-39.829,0,-47.9037	0/1:121:60,61:60:2129:61:2126:-18.5815,0,-30.328	0/0:27:19,8:19:684:8:280:0,-0.565075,-10.3426	0/1:331:171,160:171:6086:160:5604:-49.115,0,-75.1968	0/1:132:57,75:57:2024:75:2613:-31.5845,0,-15.9313	1/1:13:4,9:4:144:9:324:-4.49559,-0.217019,0	0/1:24:10,14:10:360:14:492:-5.4588,0,-1.86636	0/1:170:76,94:76:2708:94:3246:-39.0318,0,-29.494	0/1:190:101,88:101:3590:88:3119:-22.2083,0,-40.9203	1/1:19:5,14:5:180:14:500:-8.09072,-1.12408,0	0/1:408:198,210:198:7068:210:7339:-79.7243,0,-63.9316	0/1:360:180,179:180:6377:179:6242:-54.9371,0,-66.0622	0/1:132:76,56:76:2688:56:1972:-11.3051,0,-35.6849	0/1:265:121,144:121:4294:144:4985:-52.0289,0,-38.077	0/1:354:176,178:176:6277:178:6251:-60.4944,0,-56.0582	0/1:278:145,133:145:5144:133:4668:-44.9387,0,-46.7361	0/1:58:31,27:31:1116:27:937:-6.89536,0,-10.5128	0/1:154:77,77:77:2729:77:2712:-23.0432,0,-26.8304	0/1:171:87,83:87:3081:83:2919:-27.9893,0,-27.0029	0/1:32:14,18:14:491:18:632:-6.6457,0,-3.04712	0/1:143:66,77:66:2321:77:2688:-31.8111,0,-21.2273	0/1:113:62,51:62:2206:51:1795:-14.3557,0,-24.1575	0/1:363:169,193:169:6005:193:6678:-67.9532,0,-56.5917	0/1:373:190,183:190:6763:183:6400:-54.775,0,-70.4901	0/1:216:101,115:101:3611:115:4025:-45.6143,0,-31.8113	0/1:262:120,142:120:4259:142:4975:-49.8495,0,-34.4833	0/1:12:7,5:7:252:5:176:-1.34834,0,-3.14605	0/1:298:142,156:142:5096:156:5456:-64.0218,0,-51.1933	0/1:219:81,138:81:2859:138:4870:-69.18,0,-19.1989	0/1:462:230,232:230:8158:232:8064:-79.322,0,-76.7292	0/1:176:95,81:95:3372:81:2845:-19.9023,0,-38.7907	0/1:132:55,77:55:1945:77:2692:-36.2265,0,-13.6784	0/1:189:92,97:92:3234:97:3383:-33.0625,0,-30.7313	0/1:264:143,121:143:5040:121:4218:-38.9023,0,-60.5668	0/1:79:41,38:41:1453:38:1331:-10.4696,0,-15.4992	0/1:128:59,69:59:2073:69:2415:-31.3305,0,-14.5536	0/1:125:67,58:67:2368:58:2025:-16.9335,0,-27.3595	0/1:84:48,36:48:1690:36:1267:-7.16884,0,-31.5924	0/1:126:58,68:58:2040:68:2362:-32.2369,0,-24.9191	0/1:106:61,45:61:2175:45:1583:-8.72516,0,-23.0268	0/1:235:122,113:122:4349:113:3948:-32.8894,0,-41.3562	0/1:181:91,90:91:3197:90:3150:-28.8278,0,-35.9362
chr04	31427084	.	T	C	3370.05	PASS	AB=0.493206;ABP=10.6523;AC=91;AF=0.484043;AN=188;AO=9414;CIGAR=1X;DP=19110;DPB=19110;DPRA=0;EPP=20445.3;EPPR=21046.7;GTI=150;LEN=1;MEANALT=1.05319;MQM=11.6202;MQMR=10.7198;NS=94;NUMALT=1;ODDS=26.4619;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=335512;QR=347469;RO=9691;RPL=1;RPP=20436.6;RPPR=21029.4;RPR=9413;RUN=1;SAF=1;SAP=20436.6;SAR=9413;SRF=2;SRP=21029.4;SRR=9689;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:86:55,31:55:1976:31:1096:-6.3149,0,-28.2533	0/1:443:242,200:242:8708:200:7157:-57.6582,0,-91.3718	0/1:299:137,162:137:4913:162:5791:-69.4165,0,-42.6983	0/1:502:239,262:239:8538:262:9350:-92.6008,0,-67.1925	0/1:174:86,88:86:3088:88:3145:-30.5863,0,-29.9905	0/1:114:63,51:63:2264:51:1836:-17.3157,0,-26.9263	0/1:232:142,90:142:5112:90:3217:-15.927,0,-62.8858	0/1:335:218,117:218:7817:117:4156:-17.04,0,-97.6541	0/1:210:126,84:126:4516:84:3020:-19.4354,0,-52.499	0/1:129:54,75:54:1932:75:2645:-34.3412,0,-17.479	0/1:122:60,62:60:2156:62:2197:-23.7856,0,-17.4099	0/1:170:79,91:79:2824:91:3227:-40.0868,0,-28.1373	0/1:147:67,80:67:2404:80:2845:-40.9228,0,-16.0867	0/1:130:65,65:65:2340:65:2306:-26.4211,0,-19.4985	0/1:134:65,69:65:2340:69:2468:-21.7957,0,-20.5478	0/1:113:68,45:68:2440:45:1582:-13.4615,0,-30.1869	0/1:152:70,82:70:2497:82:2920:-34.3324,0,-20.7508	0/1:123:60,63:60:2156:63:2247:-27.9033,0,-17.0189	0/1:89:43,46:43:1544:46:1648:-16.2835,0,-13.1387	0/1:447:231,216:231:8300:216:7691:-79.6837,0,-80.9699	0/1:335:148,187:148:5297:187:6675:-98.7885,0,-39.028	0/1:175:112,63:112:4020:63:2244:-8.74296,0,-48.5655	0/1:301:126,175:126:4512:175:6247:-73.8129,0,-25.1121	0/1:206:119,87:119:4242:87:3105:-18.8927,0,-50.068	0/1:128:53,75:53:1904:75:2666:-39.1462,0,-13.9025	0/1:564:233,331:233:8349:331:11863:-150.663,0,-46.4423	0/1:462:210,252:210:7532:252:8970:-109.197,0,-62.1348	0/1:78:29,49:29:1036:49:1738:-23.0061,0,-2.69129	0/1:550:268,282:268:9583:282:10092:-105.742,0,-87.025	0/1:230:104,126:104:3728:126:4503:-53.9486,0,-30.2951	0/1:229:125,104:125:4484:104:3684:-33.4595,0,-55.0041	0/1:18:10,8:10:356:8:284:-4.06405,0,-4.12491	0/1:37:27,10:27:968:10:347:-0.583033,0,-16.7571	0/1:17:11,6:11:396:6:216:-2.56663,0,-4.87268	0/0:23:16,7:16:576:7:252:0,-0.529966,-9.17649	0/1:37:17,20:17:612:20:716:-9.29513,0,-4.24679	0/1:409:214,195:214:7676:195:6899:-58.6107,0,-80.9044	0/1:267:142,125:142:5100:125:4440:-37.9793,0,-61.2401	0/1:131:65,66:65:2328:66:2337:-23.8671,0,-19.1036	0/0:8:7,1:7:252:1:36:0,-1.40922,-5.3947	0/1:336:147,189:147:5280:189:6745:-75.1679,0,-33.7306	0/1:92:52,40:52:1868:40:1414:-14.8427,0,-20.9567	0/1:424:211,213:211:7572:213:7592:-96.1739,0,-75.9998	0/1:175:92,83:92:3300:83:2913:-22.1486,0,-32.9259	0/1:120:50,70:50:1792:70:2486:-31.6762,0,-9.37902	0/1:189:84,105:84:3012:105:3760:-39.9477,0,-21.2492	0/1:155:61,93:61:2188:93:3322:-44.6249,0,-8.48502	0/1:392:212,180:212:7589:180:6426:-51.3841,0,-75.4631	0/1:177:91,86:91:3272:86:3072:-33.504,0,-36.0217	0/1:495:292,203:292:10480:203:7272:-47.8837,0,-116.322	0/1:292:145,147:145:5204:147:5204:-54.0957,0,-42.9249	0/1:18:12,6:12:428:6:216:-0.0760663,0,-5.46943	0/1:248:126,122:126:4509:122:4361:-39.7801,0,-43.738	0/1:122:61,61:61:2184:61:2184:-32.2779,0,-18.2164	0/1:28:9,19:9:324:19:684:-9.47646,0,-0.0356816	0/1:339:166,173:166:5964:173:6152:-73.6687,0,-54.6821	0/1:131:76,55:76:2716:55:1962:-14.79,0,-32.8162	0/1:14:9,5:9:324:5:180:-0.381069,0,-3.97754	0/1:26:15,11:15:540:11:396:-2.16341,0,-5.75988	0/1:173:95,78:95:3416:78:2768:-32.4345,0,-39.5839	0/1:190:88,102:88:3156:102:3622:-43.6007,0,-22.0225	0/0:18:13,5:13:468:5:180:0,-0.823051,-7.19294	0/1:421:222,199:222:7960:199:7132:-68.3019,0,-89.4664	0/1:365:183,182:183:6580:182:6499:-69.5793,0,-59.6208	0/1:135:58,77:58:2088:77:2737:-37.0657,0,-12.2391	0/1:272:147,125:147:5271:125:4481:-40.9654,0,-55.0621	0/1:356:182,174:182:6521:174:6226:-55.2198,0,-63.5611	0/1:285:139,146:139:4996:146:5220:-45.5655,0,-48.3776	0/1:60:28,32:28:1008:32:1132:-13.699,0,-7.21339	0/1:153:76,77:76:2721:77:2745:-26.6051,0,-22.6187	0/1:174:88,85:88:3130:85:2988:-26.2838,0,-31.7898	0/1:33:18,15:18:648:15:524:-3.64731,0,-6.35002	0/1:142:80,62:80:2867:62:2188:-15.7565,0,-32.7788	0/1:115:52,63:52:1872:63:2260:-26.4517,0,-14.8496	0/1:377:203,173:203:7261:173:6189:-59.9551,0,-75.7137	0/1:379:188,191:188:6729:191:6848:-74.3859,0,-55.1891	0/1:220:119,101:119:4256:101:3601:-35.2537,0,-48.2294	0/1:266:146,120:146:5256:120:4260:-35.065,0,-53.9973	0/1:13:5,8:5:180:8:273:-3.71695,0,-1.04906	0/1:305:159,146:159:5708:146:5243:-52.6781,0,-65.3097	0/1:225:143,82:143:5112:82:2922:-17.703,0,-74.5977	0/1:467:239,228:239:8552:228:8078:-76.678,0,-87.4535	0/1:173:81,92:81:2908:92:3262:-37.7304,0,-20.8476	0/1:135:80,55:80:2856:55:1964:-13.2366,0,-38.0508	0/1:194:102,92:102:3653:92:3220:-29.2153,0,-36.0838	0/1:262:120,142:120:4292:142:5019:-62.6371,0,-36.3186	0/1:81:39,42:39:1400:42:1508:-15.8236,0,-13.1267	0/1:124:68,56:68:2440:56:1996:-15.4601,0,-30.9166	0/1:126:59,67:59:2120:67:2396:-29.2454,0,-17.5604	0/1:87:37,50:37:1328:50:1774:-31.6461,0,-7.1763	0/1:125:63,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chr04	31439595	.	C	T	651.746	PASS	AB=0.491192;ABP=15.1745;AC=96;AF=0.510638;AN=188;AO=8913;CIGAR=1X;DP=18127;DPB=18127;DPRA=0;EPP=19322.6;EPPR=20000.1;GTI=92;LEN=1;MEANALT=1.05319;MQM=11.0323;MQMR=11.0016;NS=94;NUMALT=1;ODDS=108.411;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316597;QR=327788;RO=9209;RPL=8903;RPP=19270.6;RPPR=19991.4;RPR=10;RUN=1;SAF=8899;SAP=19235.9;SAR=14;SRF=9208;SRP=19991.4;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:14,13:14:495:13:449:-4.98289,0,-5.8183	0/1:325:168,157:168:5975:157:5537:-58.1561,0,-69.6087	0/1:236:118,118:118:4212:118:4210:-48.1555,0,-46.2449	0/1:385:185,200:185:6591:200:7125:-81.5832,0,-66.8301	0/1:122:66,56:66:2357:56:1979:-18.7099,0,-28.7111	0/1:104:46,57:46:1636:57:1993:-25.8317,0,-15.0115	0/1:305:132,173:132:4727:173:6147:-78.555,0,-38.2721	0/1:315:152,163:152:5413:163:5744:-68.7398,0,-56.0938	0/1:166:98,68:98:3496:68:2412:-17.515,0,-47.3528	0/1:232:131,101:131:4656:101:3578:-29.2734,0,-58.7185	0/1:183:98,85:98:3500:85:3007:-28.6576,0,-41.1102	0/1:184:86,98:86:3045:98:3470:-41.5063,0,-30.2671	0/1:200:97,103:97:3475:103:3675:-41.9182,0,-36.3462	0/1:143:83,59:83:2939:59:2086:-15.6622,0,-39.7224	0/1:158:76,82:76:2696:82:2885:-33.1178,0,-27.3746	0/1:143:73,70:73:2611:70:2491:-26.534,0,-29.2384	0/1:133:79,54:79:2814:54:1924:-13.6422,0,-38.7958	0/1:147:79,68:79:2832:68:2408:-23.1425,0,-34.422	0/1:115:56,59:56:1997:59:2091:-24.0844,0,-20.8327	0/1:419:192,227:192:6845:227:8085:-100.262,0,-63.409	0/1:278:147,131:147:5246:131:4680:-46.398,0,-61.7586	0/1:283:133,150:133:4694:150:5311:-62.4321,0,-45.4755	0/1:119:56,63:56:1988:63:2240:-26.4529,0,-19.2024	0/1:168:97,71:97:3447:71:2513:-19.7792,0,-45.5821	0/1:141:71,70:71:2531:70:2474:-26.6229,0,-27.8593	0/1:572:301,271:301:10749:271:9642:-96.642,0,-124.082	0/1:412:222,190:222:7902:190:6742:-66.454,0,-96.3422	0/1:99:58,41:58:2067:41:1472:-13.1053,0,-27.649	0/1:556:307,249:307:10950:249:8824:-77.1333,0,-135.161	0/1:280:151,129:151:5409:129:4610:-43.7156,0,-65.2809	0/1:340:152,188:152:5452:188:6660:-83.199,0,-47.1603	0/1:23:13,10:13:459:10:351:-3.06694,0,-6.03355	0/1:29:16,13:16:576:13:468:-4.23523,0,-7.20182	1/1:19:4,15:4:136:15:536:-9.50656,-0.285021,0	0/0:18:16,2:16:576:2:72:0,-3.33094,-13.8441	0/1:22:12,10:12:423:10:356:-3.4648,0,-5.34571	0/1:481:232,249:232:8280:249:8916:-99.7931,0,-83.1143	0/1:238:99,139:99:3511:139:4927:-65.9101,0,-26.6633	0/1:157:84,72:84:3012:72:2557:-24.8374,0,-36.5478	1/1:12:3,9:3:108:9:315:-6.01608,-0.535895,0	0/1:226:103,123:103:3670:123:4402:-53.9576,0,-34.4444	0/1:98:66,32:66:2356:32:1144:-2.24914,0,-36.2241	0/1:139:56,83:56:2008:83:2956:-42.5719,0,-13.6396	0/1:205:110,95:110:3924:95:3379:-31.7565,0,-47.3957	0/1:171:81,90:81:2861:90:3215:-37.1679,0,-28.4701	0/1:228:118,110:118:4223:110:3927:-39.2448,0,-47.6075	0/1:297:119,178:119:4238:178:6353:-87.3213,0,-29.0688	0/1:235:119,116:119:4211:116:4159:-43.5257,0,-47.5689	0/1:228:105,123:105:3763:123:4371:-52.6862,0,-35.0254	0/1:296:135,161:135:4744:161:5746:-70.0853,0,-43.5793	0/1:254:148,106:148:5249:106:3790:-27.918,0,-69.476	0/1:18:6,12:6:212:12:428:-6.646,0,-0.622773	0/1:209:114,95:114:4081:95:3348:-31.2167,0,-50.2474	0/1:81:37,44:37:1308:44:1546:-19.0763,0,-12.0031	0/1:39:20,19:20:703:19:680:-7.33681,0,-8.31557	0/1:171:89,82:89:3168:82:2932:-30.1605,0,-36.5137	0/1:56:33,23:33:1175:23:824:-5.7238,0,-15.605	0/1:25:8,17:8:288:17:603:-9.20629,0,-0.494968	0/1:39:19,20:19:680:20:690:-8.08004,0,-7.24612	0/1:114:51,63:51:1791:63:2221:-28.238,0,-16.4397	0/1:278:154,124:154:5480:124:4418:-38.3862,0,-68.1265	1/1:26:6,20:6:201:20:720:-13.7877,-1.81762,0	0/1:272:146,126:146:5176:126:4483:-42.1403,0,-62.1578	0/1:326:166,160:166:5869:160:5625:-59.382,0,-64.756	0/1:150:71,79:71:2538:79:2799:-33.3988,0,-25.1489	0/1:115:65,50:65:2317:50:1764:-14.6184,0,-29.4677	0/1:316:161,154:161:5751:154:5447:-56.7289,0,-63.3814	0/1:185:103,82:103:3679:82:2920:-24.9227,0,-45.9863	0/1:72:38,34:38:1364:34:1220:-11.9657,0,-16.0108	0/1:180:103,77:103:3695:77:2716:-22.0188,0,-48.127	0/1:189:97,92:97:3447:92:3236:-33.4876,0,-39.4396	0/1:37:16,21:16:568:21:744:-9.64252,0,-4.79014	0/1:114:70,44:70:2481:44:1562:-9.46492,0,-35.7008	0/1:152:85,67:85:2990:67:2391:-20.684,0,-38.9994	0/1:366:176,190:176:6224:190:6692:-80.4022,0,-64.5702	0/1:251:119,132:119:4244:132:4702:-54.7391,0,-42.2668	0/1:186:86,100:86:3026:100:3569:-43.5027,0,-29.6196	0/1:252:127,125:127:4533:125:4443:-48.7096,0,-51.1523	0/1:18:10,8:10:360:8:284:-2.60051,0,-4.67065	0/1:230:123,107:123:4382:107:3817:-36.7464,0,-52.4756	0/1:268:137,131:137:4842:131:4665:-49.4685,0,-55.8602	0/1:507:228,279:228:8122:279:9928:-122.116,0,-72.3315	0/1:215:99,116:99:3497:116:4085:-49.2719,0,-32.9316	0/1:161:85,76:85:3018:76:2724:-26.6128,0,-35.4918	0/1:203:117,86:117:4131:86:3047:-24.8262,0,-54.0003	0/1:294:170,124:170:6058:124:4411:-33.181,0,-78.6526	0/1:109:68,41:68:2429:41:1464:-7.92532,0,-34.5863	0/1:150:79,71:79:2806:71:2501:-25.3099,0,-33.5003	0/1:171:94,77:94:3347:77:2744:-24.752,0,-42.1914	0/1:116:59,57:59:2116:57:2017:-21.4424,0,-23.7095	0/1:203:103,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chr04	31439607	.	T	C	9.19583e-12	PASS	AB=0.508646;ABP=14.3506;AC=92;AF=0.489362;AN=188;AO=8911;CIGAR=1X;DP=17536;DPB=17536;DPRA=0;EPP=19344.3;EPPR=18625.6;GTI=92;LEN=1;MEANALT=1.12766;MQM=10.9955;MQMR=11.0363;NS=94;NUMALT=1;ODDS=174.872;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=313071;QR=295576;RO=8612;RPL=8911;RPP=19353;RPPR=18643;RPR=0;RUN=1;SAF=8910;SAP=19344.3;SAR=1;SRF=8596;SRP=18565;SRR=16;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:12,15:12:386:15:536:-6.90364,0,-3.96834	0/1:319:158,161:158:5404:161:5650:-63.7127,0,-60.6092	0/1:231:115,115:115:3952:115:4034:-44.679,0,-46.8016	0/1:363:189,174:189:6426:174:6131:-61.96,0,-77.1364	0/1:113:52,61:52:1771:61:2128:-26.4203,0,-17.4363	0/1:97:54,43:54:1828:43:1495:-13.932,0,-24.5707	0/1:299:169,130:169:5742:130:4579:-38.0058,0,-76.4187	0/1:297:149,148:149:5049:148:5186:-57.5517,0,-60.8297	0/1:163:68,95:68:2273:95:3333:-45.2627,0,-18.3738	0/1:228:101,127:101:3451:127:4450:-56.0443,0,-30.1198	0/1:179:82,97:82:2860:97:3414:-41.2827,0,-28.347	0/1:182:101,81:101:3436:81:2871:-25.7563,0,-45.1194	0/1:195:100,95:100:3477:95:3351:-35.6256,0,-40.3769	0/1:137:57,80:57:1949:80:2777:-38.1569,0,-15.178	0/1:152:78,74:78:2674:74:2632:-27.1564,0,-30.9174	0/1:137:64,73:64:2193:73:2584:-31.0061,0,-22.1551	0/1:128:51,77:51:1778:77:2736:-37.7952,0,-12.1549	0/1:145:68,77:68:2378:77:2696:-32.8014,0,-23.7552	0/1:116:60,56:60:2101:56:1969:-20.5347,0,-24.752	0/1:402:214,187:214:7343:187:6546:-63.8447,0,-92.0332	0/1:261:119,141:119:4027:141:4891:-61.0141,0,-39.3787	0/1:282:152,130:152:5296:130:4526:-42.7092,0,-64.8802	0/1:111:60,51:60:2105:51:1810:-16.758,0,-25.902	0/1:160:68,92:68:2333:92:3247:-43.0678,0,-19.1856	0/1:134:63,71:63:2152:71:2455:-29.8873,0,-21.6181	0/1:555:260,294:260:8974:294:10326:-122.199,0,-90.9634	0/1:388:179,209:179:6063:209:7381:-90.1481,0,-62.1859	0/1:95:38,57:38:1340:57:2003:-27.8214,0,-10.9746	0/1:532:236,296:236:8080:296:10353:-131.371,0,-71.8513	0/1:275:124,151:124:4277:151:5286:-66.6964,0,-39.8634	0/1:325:180,145:180:6057:145:5093:-44.731,0,-79.5198	0/1:24:11,13:11:379:13:455:-5.73079,0,-3.75132	0/1:29:13,16:13:448:16:568:-7.19838,0,-4.2266	0/0:15:12,3:12:409:3:108:0,-1.43898,-8.86273	1/1:18:2,16:2:72:16:561:-13.8106,-3.33094,0	0/1:22:10,12:10:338:12:424:-5.35012,0,-3.44903	0/1:472:242,229:242:8411:229:8019:-82.9314,0,-95.7348	0/1:224:129,95:129:4421:95:3361:-26.761,0,-60.0735	0/1:147:66,81:66:2277:81:2836:-36.0622,0,-21.3207	0/0:12:9,3:9:298:3:108:0,-0.535895,-6.00423	0/1:217:121,96:121:4151:96:3398:-29.7722,0,-54.5688	0/1:94:32,62:32:1119:62:2199:-33.4638,0,-3.43856	0/1:134:81,53:81:2798:53:1862:-12.0658,0,-40.716	0/1:197:92,105:92:3250:105:3713:-44.5967,0,-31.2987	0/1:167:88,78:88:3079:78:2683:-26.7446,0,-36.6419	0/1:219:107,112:107:3689:112:3967:-44.1873,0,-38.9099	0/1:286:170,116:170:5855:116:4061:-29.4373,0,-82.4953	0/1:230:113,117:113:3895:117:4100:-46.9208,0,-42.1089	0/1:221:120,101:120:4131:101:3599:-33.258,0,-51.6344	0/1:284:158,126:158:5409:126:4371:-38.5407,0,-70.5512	0/1:247:105,141:105:3583:141:4964:-64.8095,0,-29.1821	0/1:16:10,6:10:347:6:192:-1.18473,0,-5.26091	0/1:202:88,114:88:2979:114:4067:-52.2818,0,-26.3817	0/1:81:44,36:44:1498:36:1275:-11.1437,0,-19.367	0/1:38:19,19:19:662:19:672:-7.63343,0,-7.53194	0/1:168:80,87:80:2692:87:3070:-35.6365,0,-29.1276	0/1:54:23,31:23:789:31:1094:-14.4016,0,-6.37438	0/1:26:18,8:18:627:8:284:-0.192203,0,-9.88941	0/1:38:19,19:19:676:19:669:-7.51587,0,-7.4557	0/1:108:62,46:62:2124:46:1613:-13.0561,0,-28.9062	0/1:269:121,148:121:4118:148:5197:-64.862,0,-38.1627	0/0:27:21,6:21:700:6:212:0,-2.0865,-14.6894	0/1:262:120,142:120:4195:142:4970:-60.9639,0,-39.2931	0/1:320:158,162:158:5453:162:5765:-62.7685,0,-59.0553	0/1:150:80,70:80:2718:70:2451:-25.6506,0,-34.2011	0/1:112:50,62:50:1660:62:2143:-27.337,0,-15.4302	0/1:307:151,153:151:5143:153:5420:-58.54,0,-57.0148	0/1:179:80,99:80:2779:99:3470:-43.7894,0,-24.734	0/1:71:34,37:34:1199:37:1288:-15.2749,0,-12.2534	0/1:174:73,101:73:2449:101:3561:-47.9649,0,-19.8873	0/1:181:90,91:90:3113:91:3208:-35.6397,0,-33.8227	0/1:36:20,16:20:692:16:550:-5.07546,0,-8.94816	0/1:106:38,68:38:1284:68:2370:-36.0621,0,-5.81558	0/1:146:65,81:65:2235:81:2848:-36.993,0,-20.5153	0/1:346:177,169:177:5984:169:5954:-63.304,0,-70.9012	0/1:244:128,116:128:4350:116:4018:-41.286,0,-52.6011	0/1:179:95,84:95:3284:84:2900:-29.5532,0,-40.5987	0/1:243:122,121:122:4201:121:4239:-47.0988,0,-48.5517	0/1:19:9,10:9:311:10:347:-4.35782,0,-3.28045	0/1:222:98,124:98:3338:124:4360:-55.8172,0,-30.1583	0/1:258:126,132:126:4412:132:4656:-53.4558,0,-47.3299	0/1:483:261,221:261:8929:221:7822:-72.606,0,-111.494	0/1:209:114,95:114:3947:95:3344:-30.8182,0,-48.9557	0/1:160:76,84:76:2599:84:2961:-34.7783,0,-26.8247	0/1:198:84,114:84:2894:114:3921:-52.4015,0,-23.223	0/1:289:125,164:125:4314:164:5782:-74.0305,0,-35.6894	0/1:108:41,67:41:1448:67:2378:-33.9177,0,-8.21996	0/1:154:76,78:76:2592:78:2738:-30.9345,0,-31.3025	0/1:168:77,91:77:2638:91:3218:-40.028,0,-25.5836	0/1:116:57,59:57:1990:59:2088:-23.6975,0,-21.4312	0/1:196:98,98:98:3356:98:34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chr04	31532659	.	T	C	522806	PASS	AB=0.640394;ABP=1080.39;AC=150;AF=0.797872;AN=188;AO=23665;CIGAR=1X;DP=26057;DPB=26057;DPRA=0;EPP=51104.7;EPPR=5097.42;GTI=7;LEN=1;MEANALT=1.2234;MQM=59.9863;MQMR=59.9954;NS=94;NUMALT=1;ODDS=0.0279508;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=844983;QR=83926;RO=2370;RPL=23636;RPP=51139.3;RPPR=5106.06;RPR=29;RUN=1;SAF=4;SAP=51356.2;SAR=23661;SRF=1;SRP=5140.72;SRR=2369;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:41:8,33:8:279:33:1184:-94.5261,0,-13.1053	1/1:406:0,406:0:0:406:14489:-1303.76,-122.218,0	1/1:275:0,275:0:0:275:9827:-884.377,-82.7833,0	1/1:534:1,532:1:36:532:19010:-1706.94,-157.136,0	0/1:80:24,56:24:833:56:1997:-155.92,0,-51.2025	0/1:68:22,46:22:780:46:1642:-127.599,0,-50.053	0/1:153:57,96:57:2048:96:3444:-264.115,0,-138.534	1/1:234:2,232:2:72:232:8247:-735.406,-63.6043,0	1/1:217:1,215:1:36:215:7699:-689.344,-61.784,0	1/1:178:0,177:0:0:177:6326:-569.072,-53.2823,0	0/1:230:26,204:26:913:204:7278:-585.837,0,-13.2471	0/1:75:32,43:32:1144:43:1540:-116.316,0,-80.6923	1/1:87:0,87:0:0:87:3111:-280.216,-26.1896,0	1/1:88:1,87:1:36:87:3100:-275.65,-22.9119,0	1/1:59:0,58:0:0:58:2067:-186.098,-17.4597,0	0/1:74:32,42:32:1144:42:1491:-112.208,0,-80.9933	0/1:104:42,62:42:1451:62:2219:-168.175,0,-99.5712	1/1:69:0,69:0:0:69:2472:-222.734,-20.7711,0	1/1:132:11,121:11:396:121:4327:-353.623,-3.75321,0	0/1:349:117,232:117:4158:232:8304:-642.306,0,-269.343	0/1:170:88,82:88:3122:82:2944:-214.01,0,-230.03	0/1:81:21,60:21:733:60:2132:-167.763,0,-41.9062	1/1:434:1,432:1:36:432:15413:-1383.28,-127.108,0	1/1:199:10,189:10:356:189:6775:-577.44,-27.5237,0	0/1:91:21,70:21:756:70:2479:-195.968,0,-40.9735	1/1:397:2,395:2:72:395:14130:-1264.62,-112.672,0	0/1:292:122,170:122:4315:170:6030:-454.907,0,-300.625	1/1:40:0,40:0:0:40:1428:-128.818,-12.0412,0	1/1:399:0,399:0:0:399:14263:-1283.32,-120.111,0	0/1:260:115,144:115:4074:144:5113:-382.118,0,-288.669	0/1:289:100,189:100:3534:189:6760:-521.477,0,-231.272	1/1:552:4,548:4:144:548:19604:-1750.57,-152.855,0	1/1:465:3,462:3:108:462:16486:-1473.33,-129.904,0	1/1:1345:0,1345:0:0:1345:47997:-4317.7,-404.885,0	1/1:932:6,925:6:208:925:33059:-2955.21,-261.558,0	1/1:927:2,924:2:72:924:33042:-2965.91,-272.277,0	0/1:218:95,123:95:3370:123:4390:-329.648,0,-237.89	0/1:147:48,99:48:1705:99:3511:-271.949,0,-109.482	1/1:492:0,492:0:0:492:17586:-1582.36,-148.107,0	1/1:542:0,542:0:0:542:19316:-1737.98,-163.158,0	1/1:291:5,285:5:180:285:10173:-898.758,-71.1065,0	0/1:185:21,164:21:756:164:5863:-472.088,0,-12.6767	0/1:247:79,168:79:2753:168:6009:-466.559,0,-173.653	0/1:118:64,54:64:2277:54:1936:-138.995,0,-169.669	0/1:117:50,66:50:1788:66:2364:-177.739,0,-125.923	1/1:216:0,216:0:0:216:7689:-692.049,-65.0225,0	1/1:216:0,216:0:0:216:7719:-694.743,-65.0225,0	0/1:239:77,162:77:2703:162:5785:-448.819,0,-171.565	0/1:82:29,53:29:1036:53:1883:-145.063,0,-68.8695	0/1:225:107,118:107:3813:118:4218:-312.067,0,-275.635	0/1:162:76,86:76:2689:86:3092:-229.74,0,-193.488	1/1:566:10,556:10:360:556:19815:-1750.13,-137.639,0	1/1:317:0,317:0:0:317:11353:-1021.65,-95.4265,0	0/1:71:27,44:27:960:44:1565:-119.767,0,-65.3431	1/1:753:6,747:6:216:747:26665:-2379.3,-206.885,0	1/1:196:0,195:0:0:195:6954:-625.567,-58.7009,0	1/1:191:0,189:0:0:189:6759:-608.025,-56.8947,0	1/1:1764:2,1760:2:72:1760:62851:-5647.47,-523.938,0	1/1:577:8,569:8:288:569:20303:-1800.51,-147.427,0	0/1:74:28,46:28:993:46:1640:-125.612,0,-67.4063	1/1:114:1,113:1:36:113:4044:-360.55,-30.7191,0	1/1:865:1,863:1:36:863:30756:-2763.51,-256.851,0	1/1:145:0,145:0:0:145:5192:-467.419,-43.6494,0	0/1:208:87,121:87:3049:121:4318:-326.182,0,-212.02	1/1:89:0,89:0:0:89:3192:-287.503,-26.7917,0	1/1:279:1,278:1:36:278:9899:-887.258,-80.3891,0	1/1:301:2,299:2:72:299:10659:-952.381,-83.7733,0	1/1:163:2,161:2:72:161:5746:-510.361,-42.2312,0	1/1:322:1,321:1:36:321:11466:-1028.22,-93.3334,0	1/1:101:0,100:0:0:100:3592:-323.126,-30.103,0	0/1:103:53,50:53:1862:50:1800:-131.276,0,-136.85	1/1:554:13,540:13:464:540:19245:-1689.47,-124.732,0	0/1:111:45,66:45:1593:66:2353:-178.614,0,-110.244	1/1:137:0,136:0:0:136:4844:-435.754,-40.9401,0	1/1:420:0,420:0:0:420:15018:-1351.35,-126.433,0	0/1:229:74,154:74:2565:154:5488:-425.093,0,-162.14	0/1:193:43,150:43:1518:150:5353:-423.804,0,-78.8103	1/1:124:2,122:2:72:122:4371:-386.726,-30.491,0	1/1:777:11,765:11:396:765:27295:-2419.79,-197.976,0	0/1:182:84,98:84:2997:98:3491:-259.614,0,-215.173	0/1:190:79,111:79:2780:111:3961:-299.485,0,-193.243	1/1:339:0,339:0:0:339:12085:-1087.47,-102.049,0	1/1:103:0,103:0:0:103:3674:-330.864,-31.0061,0	1/1:73:0,73:0:0:73:2590:-233.349,-21.9752,0	0/1:137:81,56:81:2892:56:2004:-139.392,0,-219.276	0/1:149:59,90:59:2100:90:3223:-245.438,0,-144.416	1/1:71:2,69:2:72:69:2452:-214.099,-14.5364,0	1/1:82:0,82:0:0:82:2940:-264.834,-24.6845,0	1/1:82:0,82:0:0:82:2927:-263.665,-24.6845,0	1/1:415:0,415:0:0:415:14835:-1334.89,-124.927,0	0/1:450:50,400:50:1800:400:14278:-1149.32,0,-26.8187	0/1:99:76,22:76:2663:22:788:-41.4223,0,-210.092	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:114:0,114:0:0:114:4092:-368.465,-34.3174,0
chr04	31767921	.	T	A	31292.6	PASS	AB=0.480618;ABP=15.8889;AC=47;AF=0.25;AN=188;AO=1908;CIGAR=1X;DP=8443;DPB=8443;DPRA=1.14385;EPP=4146.18;EPPR=14165.4;GTI=1;LEN=1;MEANALT=1.12727;MQM=59.9292;MQMR=59.971;NS=94;NUMALT=1;ODDS=3.94167;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68007;QR=233905;RO=6522;RPL=0;RPP=4146.18;RPPR=14165.4;RPR=1908;RUN=1;SAF=1908;SAP=4146.18;SAR=0;SRF=6522;SRP=14165.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:12:8,4:8:288:4:144:-9.69654,0,-22.655	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.165	0/0:160:160,0:160:5729:0:0:0,-48.1648,-515.725	0/0:200:198,2:198:7104:2:72:0,-53.3693,-632.58	0/1:51:30,21:30:1080:21:744:-51.9318,0,-82.1607	0/1:51:24,27:24:860:27:972:-72.4454,0,-62.3693	0/1:114:52,62:52:1868:62:2209:-164.756,0,-134.082	0/0:174:173,1:173:6200:1:36:0,-48.7809,-554.453	0/0:111:109,0:109:3924:0:0:0,-32.8123,-352.991	0/0:100:100,0:100:3580:0:0:0,-30.103,-322.407	0/1:52:20,32:20:716:32:1140:-87.2556,0,-48.7955	0/1:65:39,26:39:1396:26:929:-64.3611,0,-106.372	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/0:94:94,0:94:3359:0:0:0,-28.2968,-302.522	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/1:52:22,30:22:783:30:1061:-80.1458,0,-55.1394	0/1:27:10,17:10:360:17:604:-46.5628,0,-24.6165	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/1:33:16,17:16:572:17:612:-45.4794,0,-41.8794	0/1:218:108,109:108:3867:109:3869:-282.714,0,-282.541	0/1:149:78,71:78:2800:71:2533:-183.366,0,-207.386	0/1:127:54,73:54:1940:73:2575:-193.765,0,-136.644	0/0:78:77,1:77:2749:1:21:0,-21.3804,-245.551	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:102:50,52:50:1788:52:1864:-137.334,0,-130.498	0/0:220:219,1:219:7840:1:36:0,-62.6283,-702.03	0/1:237:119,118:119:4268:118:4194:-306.297,0,-312.953	0/0:21:21,0:21:747:0:0:0,-6.32163,-67.5543	0/0:236:236,0:236:8456:0:0:0,-71.0431,-761.041	0/1:116:59,56:59:2124:56:1982:-143.672,0,-156.45	0/1:78:45,33:45:1612:33:1184:-83.3876,0,-121.89	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/1:19:9,10:9:324:10:360:-27.0247,0,-23.7863	0/0:11:11,0:11:388:0:0:0,-3.31133,-35.1696	0/1:9:6,3:6:212:3:108:-7.3659,0,-16.7155	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:128:53,74:53:1908:74:2641:-199.345,0,-133.407	0/1:128:61,66:61:2188:66:2356:-173.708,0,-158.595	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:125:122,3:122:4377:3:108:0,-27.5536,-384.026	0/1:41:24,17:24:864:17:604:-42.3484,0,-65.7403	0/1:118:68,50:68:2440:50:1792:-126.041,0,-184.325	0/1:54:33,21:33:1188:21:756:-52.1116,0,-90.973	0/1:35:15,20:15:536:20:716:-54.2317,0,-38.0388	0/0:95:95,0:95:3408:0:0:0,-28.5978,-306.934	0/0:113:113,0:113:4047:0:0:0,-34.0164,-364.417	0/1:135:75,60:75:2688:60:2146:-152.766,0,-201.526	0/1:95:33,62:33:1184:62:2217:-171.196,0,-78.2705	0/0:150:150,0:150:5363:0:0:0,-45.1545,-482.802	0/1:97:44,53:44:1580:53:1885:-140.727,0,-113.292	0/1:24:11,13:11:396:13:464:-34.8728,0,-28.758	0/0:189:188,0:188:6756:0:0:0,-56.5936,-607.75	0/1:97:59,38:59:2120:38:1349:-92.5084,0,-161.869	0/1:23:14,9:14:504:9:324:-22.5822,0,-38.3438	0/0:118:118,0:118:4220:0:0:0,-35.5215,-379.981	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6206	0/1:19:7,12:7:252:12:432:-33.5016,0,-17.3094	0/1:105:58,47:58:2088:47:1684:-120.239,0,-156.582	0/0:95:95,0:95:3407:0:0:0,-28.5978,-306.843	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/0:147:146,0:146:5244:0:0:0,-43.9504,-471.735	0/1:142:68,72:68:2448:72:2573:-188.456,0,-178.07	0/1:128:113,14:113:4060:14:504:-7.10746,0,-326.995	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.59	0/0:192:190,1:190:6824:1:36:0,-54.2768,-610.421	0/0:258:257,1:257:9228:1:36:0,-74.0675,-826.887	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.838	0/1:42:22,20:22:788:20:720:-52.4855,0,-58.6015	0/1:36:23,13:23:828:13:437:-28.8134,0,-64.007	0/1:130:58,72:58:2072:72:2542:-189.895,0,-147.427	0/0:110:110,0:110:3932:0:0:0,-33.1133,-354.073	0/0:139:139,0:139:4972:0:0:0,-41.8432,-447.629	0/1:166:96,70:96:3452:70:2478:-173.301,0,-260.92	0/1:109:66,43:66:2364:43:1540:-106.069,0,-180.206	0/0:136:136,0:136:4892:0:0:0,-40.9401,-440.429	0/1:22:9,13:9:324:13:449:-34.1148,0,-22.8832	0/1:134:66,68:66:2372:68:2425:-178.166,0,-173.4	0/1:106:77,29:77:2752:29:1044:-62.1202,0,-216.01	0/0:176:176,0:176:6305:0:0:0,-52.9813,-567.54	0/0:49:49,0:49:1755:0:0:0,-14.7505,-158.233	0/0:70:70,0:70:2520:0:0:0,-21.0721,-227.051	0/1:38:18,20:18:648:20:716:-53.3286,0,-47.2127	0/1:92:47,45:47:1680:45:1616:-118.035,0,-123.792	0/0:18:17,1:17:612:1:36:0,-1.82026,-51.8152	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.705	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.328	0/0:64:64,0:64:2304:0:0:0,-19.2659,-207.62	0/1:112:52,60:52:1860:60:2156:-160.592,0,-133.964	0/1:69:19,50:19:684:50:1796:-141.151,0,-41.1193	0/0:182:181,0:181:6488:0:0:0,-54.4864,-583.637	0/0:75:75,0:75:2696:0:0:0,-22.5772,-242.884
chr04	31917853	.	A	G	946860	PASS	AB=0.625124;ABP=1372.4;AC=149;AF=0.792553;AN=188;AO=42934;CIGAR=1X;DP=46984;DPB=46984;DPRA=0;EPP=93233;EPPR=8764.9;GTI=7;LEN=1;MEANALT=1.14894;MQM=59.9821;MQMR=59.9864;NS=94;NUMALT=1;ODDS=2.98398;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1534565;QR=143891;RO=4035;RPL=42934;RPP=93233;RPPR=8764.9;RPR=0;RUN=1;SAF=0;SAP=93233;SAR=42934;SRF=0;SRP=8764.9;SRR=4035;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:93:39,54:39:1369:54:1936:-146.521,0,-95.5107	1/1:305:1,304:1:36:304:10854:-973.164,-88.2159,0	1/1:232:0,232:0:0:232:8300:-747.01,-69.839,0	1/1:605:1,604:1:36:604:21554:-1935.69,-178.525,0	0/1:178:74,104:74:2648:104:3704:-279.981,0,-184.983	0/1:210:26,184:26:909:184:6554:-526.726,0,-18.9071	0/1:328:127,201:127:4533:201:7188:-548.239,0,-309.399	1/1:449:0,448:0:0:448:16006:-1439.82,-134.861,0	1/1:185:0,185:0:0:185:6476:-582.938,-55.6906,0	1/1:342:1,341:1:36:341:12193:-1093.62,-99.354,0	0/1:385:59,326:59:2116:326:11639:-931.405,0,-74.8122	0/1:96:45,51:45:1601:51:1823:-135.452,0,-115.479	1/1:87:0,87:0:0:87:3128:-281.745,-26.1896,0	1/1:265:0,265:0:0:265:9444:-849.924,-79.773,0	1/1:63:0,63:0:0:63:2268:-204.382,-18.9649,0	0/1:82:52,30:52:1838:30:1076:-72.4684,0,-141.012	0/1:132:55,77:55:1929:77:2748:-207.827,0,-134.146	1/1:103:0,103:0:0:103:3692:-332.482,-31.0061,0	0/1:294:39,255:39:1400:255:9144:-734.428,0,-37.7964	0/1:455:246,209:246:8764:209:7468:-535.196,0,-651.779	0/1:440:114,326:114:4088:326:11613:-912.592,0,-235.652	0/1:157:93,64:93:3340:64:2288:-158.92,0,-253.555	1/1:102:3,99:3:108:99:3533:-308.103,-20.6299,0	1/1:343:6,337:6:212:337:12072:-1066.9,-83.8285,0	0/1:124:51,73:51:1832:73:2616:-198.36,0,-127.833	1/1:1036:0,1035:0:0:1035:36973:-3326.02,-311.566,0	0/1:567:244,323:244:8699:323:11557:-869.317,0,-612.217	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:639:0,639:0:0:639:22776:-2049.25,-192.358,0	0/1:226:105,121:105:3768:121:4328:-321.663,0,-271.286	0/1:392:120,272:120:4258:272:9713:-756.112,0,-265.395	1/1:1475:12,1463:12:428:1463:52406:-4675.8,-405.16,0	1/1:1342:46,1296:46:1633:1296:46411:-4027.04,-256.725,0	1/1:1596:17,1578:17:612:1578:56486:-5025.49,-424.948,0	1/1:2357:20,2337:20:689:2337:83445:-7444.55,-647.199,0	1/1:3092:2,3089:2:72:3089:110356:-9920.92,-923.907,0	0/1:279:133,146:133:4748:146:5218:-385.772,0,-343.492	0/1:310:158,152:158:5637:152:5436:-396.051,0,-414.132	1/1:731:0,731:0:0:731:26126:-2350.57,-220.053,0	1/1:2078:2,2076:2:72:2076:74227:-6670.79,-618.704,0	1/1:321:3,318:3:104:318:11365:-1013.03,-86.9278,0	0/1:181:32,149:32:1144:149:5344:-426.605,0,-48.7831	0/1:402:139,262:139:4942:262:9360:-721.294,0,-323.857	0/1:96:31,65:31:1116:65:2324:-180.521,0,-71.8528	0/1:69:34,35:34:1224:35:1256:-92.5742,0,-89.696	1/1:646:0,645:0:0:645:22965:-2065.89,-194.164,0	1/1:256:0,256:0:0:256:9172:-825.451,-77.0637,0	0/1:386:188,197:188:6699:197:7040:-517.407,0,-486.733	0/1:203:73,130:73:2578:130:4652:-357.733,0,-171.158	1/1:442:0,442:0:0:442:15815:-1423.04,-133.055,0	0/1:359:110,249:110:3941:249:8917:-694.441,0,-246.81	1/1:1689:22,1666:22:788:1666:59609:-5291.27,-437.254,0	0/1:231:99,132:99:3548:132:4719:-355.332,0,-249.99	0/1:135:44,91:44:1572:91:3256:-252.622,0,-101.133	1/1:1232:46,1185:46:1644:1185:42402:-3666.07,-222.532,0	1/1:289:0,289:0:0:289:10330:-929.622,-86.9977,0	1/1:108:0,108:0:0:108:3868:-348.086,-32.5112,0	1/1:2578:0,2577:0:0:2577:92143:-8288.98,-775.754,0	1/1:1516:26,1489:26:928:1489:53226:-4704.54,-372.582,0	0/1:274:102,172:102:3637:172:6154:-471.477,0,-245.052	1/1:150:1,149:1:36:149:5332:-476.416,-41.5562,0	1/1:1878:1,1877:1:36:1877:67085:-6031.48,-561.736,0	1/1:144:0,143:0:0:143:5108:-459.505,-43.0473,0	0/1:432:171,261:171:6109:261:9364:-712.676,0,-419.866	1/1:195:8,187:8:284:187:6704:-577.531,-32.7975,0	1/1:211:0,211:0:0:211:7560:-680.439,-63.5173,0	1/1:830:5,825:5:180:825:29365:-2625.1,-233.303,0	1/1:374:0,374:0:0:374:13334:-1199.86,-112.585,0	1/1:598:0,598:0:0:598:21388:-1924.38,-180.016,0	1/1:99:0,98:0:0:98:3500:-314.851,-29.5009,0	0/1:148:59,89:59:2124:89:3171:-241.062,0,-146.876	1/1:781:15,766:15:540:766:27376:-2414.11,-186.168,0	0/1:89:49,40:49:1760:40:1415:-100.855,0,-131.892	1/1:164:0,164:0:0:164:5861:-527.601,-49.3689,0	1/1:761:1,758:1:36:758:27004:-2426,-225.243,0	0/1:362:191,171:191:6821:171:6136:-443.365,0,-504.67	0/1:268:144,124:144:5118:124:4435:-318.645,0,-380.087	1/1:259:3,256:3:108:256:9159:-814.151,-67.8916,0	1/1:1596:18,1578:18:648:1578:56448:-5019.65,-421.792,0	0/1:244:113,131:113:4037:131:4696:-349.348,0,-290.066	0/1:282:131,151:131:4598:151:5389:-400.251,0,-329.006	1/1:500:1,499:1:36:499:17810:-1598.91,-146.917,0	1/1:153:0,153:0:0:153:5446:-490.271,-46.0576,0	1/1:93:0,93:0:0:93:3323:-299.288,-27.9958,0	0/1:130:47,83:47:1676:83:2928:-224.621,0,-111.993	0/1:255:97,158:97:3455:158:5649:-431.767,0,-234.401	1/1:63:0,63:0:0:63:2252:-202.943,-18.9649,0	1/1:134:0,134:0:0:134:4791:-431.347,-40.338,0	1/1:89:0,89:0:0:89:3175:-285.972,-26.7917,0	1/1:961:1,960:1:36:960:34424:-3093.4,-285.692,0	0/1:667:80,587:80:2861:587:21018:-1690.3,0,-56.9387	0/1:109:59,50:59:2116:50:17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chr04	32101115	.	A	T	48529.9	PASS	AB=0.375255;ABP=866.038;AC=45;AF=0.239362;AN=188;AO=2418;CIGAR=1X;DP=16062;DPB=16062;DPRA=1.01464;EPP=5253.63;EPPR=29626.2;GTI=5;LEN=1;MEANALT=1.01786;MQM=58.1046;MQMR=50.2678;NS=94;NUMALT=1;ODDS=3.99908;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=86098;QR=486756;RO=13642;RPL=1181;RPP=5.82657;RPPR=90.1748;RPR=1237;RUN=1;SAF=1181;SAP=5.82657;SAR=1237;SRF=7191;SRP=90.1748;SRR=6451;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:60:41,19:41:1464:19:663:-41.9236,0,-112.825	0/0:255:255,0:255:9080:0:0:0,-76.7626,-797.764	0/0:306:306,0:306:10897:0:0:0,-92.1152,-967.9	0/0:498:497,1:497:17745:1:32:0,-146.714,-1562.81	0/1:33:27,6:27:964:6:216:-9.85182,0,-75.0021	0/1:44:27,17:27:955:17:608:-41.8012,0,-71.5922	0/1:150:74,76:74:2652:76:2696:-197.542,0,-189.449	0/0:245:245,0:245:8763:0:0:0,-73.7523,-775.493	0/0:163:161,2:161:5752:2:72:0,-42.2312,-502.222	0/0:252:252,0:252:9000:0:0:0,-75.8596,-776.012	0/1:104:53,51:53:1891:51:1819:-132.635,0,-136.317	0/1:165:86,79:86:3064:79:2799:-202.193,0,-222.784	0/0:138:138,0:138:4906:0:0:0,-41.5421,-435.098	0/0:118:118,0:118:4215:0:0:0,-35.5215,-372.916	0/0:134:134,0:134:4774:0:0:0,-40.338,-417.353	0/1:126:72,54:72:2564:54:1904:-133.689,0,-188.979	0/1:97:54,43:54:1932:43:1533:-108.656,0,-141.125	0/0:107:107,0:107:3824:0:0:0,-32.2102,-337.508	0/1:68:32,36:32:1144:36:1284:-95.3056,0,-81.6696	0/1:245:165,80:165:5857:80:2859:-183.607,0,-440.398	0/1:256:190,66:190:6769:66:2346:-133.427,0,-523.028	0/1:66:36,30:36:1284:30:1063:-76.0988,0,-94.0831	0/0:200:197,3:197:7042:3:108:0,-50.1357,-616.674	0/0:191:186,5:186:6656:5:176:0,-41.3155,-560.497	0/1:94:70,24:70:2491:24:851:-48.536,0,-193.638	0/0:687:686,1:686:24490:1:36:0,-203.21,-2163.03	0/1:391:257,134:257:9157:134:4787:-313.019,0,-692.809	0/0:79:79,0:79:2798:0:0:0,-23.7814,-245.136	0/0:479:479,0:479:17128:0:0:0,-144.193,-1514.74	0/1:195:136,59:136:4821:59:2103:-130.792,0,-365.044	0/1:171:123,48:123:4400:48:1697:-101.398,0,-332.58	0/1:14:12,2:12:428:2:72:-2.62068,0,-34.2526	0/1:24:15,9:15:540:9:324:-22.2796,0,-40.9534	0/0:5:5,0:5:176:0:0:0,-1.50515,-15.9677	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.3193	0/0:29:29,0:29:1036:0:0:0,-8.72987,-92.6582	0/1:415:224,191:224:8004:191:6827:-489.068,0,-580.833	0/1:209:147,62:147:5275:62:2204:-135.442,0,-397.494	0/0:100:100,0:100:3584:0:0:0,-30.103,-317.982	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.2633	0/0:387:384,3:384:13715:3:108:0,-106.426,-1203.97	0/0:55:55,0:55:1964:0:0:0,-16.5566,-174.534	0/1:113:87,26:87:3115:26:936:-50.5227,0,-239.12	0/1:143:74,69:74:2628:69:2464:-178.706,0,-186.551	0/1:107:52,55:52:1856:55:1972:-145.466,0,-132.06	0/0:176:176,0:176:6270:0:0:0,-52.9813,-556.843	0/0:184:183,1:183:6527:1:36:0,-51.7922,-572.537	0/1:267:180,87:180:6401:87:3089:-197.602,0,-484.588	0/1:175:129,46:129:4587:46:1648:-95.7904,0,-352.985	0/0:358:358,0:358:12765:0:0:0,-107.769,-1119.81	0/1:162:120,42:120:4296:42:1496:-86.0836,0,-328.014	0/1:16:7,9:7:252:9:324:-24.6878,0,-17.5737	0/1:253:132,121:132:4723:121:4298:-310.739,0,-344.784	0/1:91:68,23:68:2428:23:828:-47.3732,0,-190.484	0/1:18:13,5:13:468:5:165:-9.75414,0,-35.8317	0/0:359:359,0:359:12807:0:0:0,-108.07,-1130.36	0/0:86:86,0:86:3080:0:0:0,-25.8886,-270.16	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.0744	0/0:38:35,3:35:1256:3:108:0,-1.36679,-102.125	0/1:87:62,25:62:2220:25:868:-52.2332,0,-170.866	0/0:196:195,1:195:6976:1:36:0,-55.4062,-607.431	0/0:11:11,0:11:388:0:0:0,-3.31133,-34.0053	0/0:446:445,1:445:15922:1:36:0,-130.661,-1398.47	0/1:240:174,66:174:6204:66:2363:-140.509,0,-473.587	0/0:153:153,0:153:5434:0:0:0,-46.0576,-474.917	0/0:154:154,0:154:5469:0:0:0,-46.3586,-479.329	0/0:277:277,0:277:9872:0:0:0,-83.3853,-864.345	0/0:175:175,0:175:6245:0:0:0,-52.6802,-548.537	0/0:70:70,0:70:2499:0:0:0,-21.0721,-223.434	0/0:132:132,0:132:4691:0:0:0,-39.736,-414.975	0/1:136:86,50:86:3076:50:1776:-119.125,0,-228.837	0/1:30:17,13:17:612:13:468:-33.4248,0,-45.7496	0/1:148:102,46:102:3648:46:1637:-103.055,0,-278.933	0/0:196:196,0:196:6996:0:0:0,-59.0019,-613.849	0/0:270:270,0:270:9622:0:0:0,-81.2781,-853.755	0/1:267:181,86:181:6484:86:3084:-197.303,0,-487.762	0/1:69:57,12:57:2036:12:432:-18.4456,0,-160.66	0/0:250:249,1:249:8916:1:36:0,-71.6602,-784.26	0/1:11:10,1:10:356:1:36:-0.285939,0,-28.5957	0/1:203:125,78:125:4467:78:2792:-190.146,0,-331.171	0/1:128:87,41:87:3104:41:1453:-92.5063,0,-236.348	0/0:400:400,0:400:14308:0:0:0,-120.412,-1244.95	0/0:159:159,0:159:5596:0:0:0,-47.8638,-485.096	0/0:162:162,0:162:5743:0:0:0,-48.7669,-503.386	0/1:180:87,93:87:3092:93:3327:-244.901,0,-215.308	0/1:268:122,146:122:4372:146:5207:-387.088,0,-303.894	0/0:66:66,0:66:2352:0:0:0,-19.868,-207.101	0/0:120:120,0:120:4281:0:0:0,-36.1236,-378.082	0/0:134:134,0:134:4788:0:0:0,-40.338,-425.267	0/0:101:101,0:101:3589:0:0:0,-30.404,-320.755	0/1:186:95,91:95:3404:91:3200:-231.963,0,-246.624	0/1:148:71,75:71:2511:75:2652:-194.453,0,-175.262	0/0:347:347,0:347:12356:0:0:0,-104.457,-1089.62	0/0:205:205,0:205:7319:0:0:0,-61.7111,-643.44
chr04	32101116	.	C	T	366184	PASS	AB=0.625313;ABP=875.948;AC=143;AF=0.760638;AN=188;AO=13667;CIGAR=1X;DP=16095;DPB=16095;DPRA=0;EPP=29680.5;EPPR=5271;GTI=5;LEN=1;MEANALT=1.02128;MQM=50.1769;MQMR=58.1286;NS=94;NUMALT=1;ODDS=1.10906;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=487344;QR=85909;RO=2426;RPL=7138;RPP=61.9375;RPPR=5.62036;RPR=6529;RUN=1;SAF=7138;SAP=61.9375;SAR=6529;SRF=1186;SRP=5.62036;SRR=1240;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:18,40:18:625:40:1411:-108.778,0,-39.1051	1/1:257:0,257:0:0:257:9157:-805.401,-77.3647,0	1/1:306:0,306:0:0:306:10939:-971.515,-92.1152,0	1/1:498:1,497:1:36:497:17678:-1557.38,-146.315,0	0/1:34:6,28:6:216:28:999:-77.8872,0,-9.55079	0/1:44:18,26:18:625:26:936:-69.9326,0,-43.3223	0/1:147:73,74:73:2598:74:2644:-189.923,0,-189.63	1/1:243:0,243:0:0:243:8653:-766.294,-73.1503,0	1/1:166:2,164:2:72:164:5850:-510.346,-43.1343,0	1/1:256:0,256:0:0:256:9140:-787.482,-77.0637,0	0/1:107:52,55:52:1853:55:1960:-141.01,0,-134.784	0/1:164:78,85:78:2723:85:3035:-220.304,0,-195.6	1/1:137:0,137:0:0:137:4886:-433.149,-41.2411,0	1/1:115:0,115:0:0:115:4125:-364.655,-34.6185,0	1/1:133:0,133:0:0:133:4761:-416.022,-40.037,0	0/1:131:58,73:58:2013:73:2616:-191.752,0,-141.988	0/1:97:43,54:43:1518:54:1927:-141.337,0,-107.306	1/1:107:0,107:0:0:107:3826:-337.537,-32.2102,0	0/1:70:37,33:37:1305:33:1175:-83.8502,0,-96.5889	0/1:247:78,169:78:2791:169:6032:-454.268,0,-176.878	0/1:255:65,190:65:2324:190:6720:-518.547,0,-131.75	0/1:67:31,36:31:1112:36:1292:-94.5617,0,-80.2083	1/1:202:3,199:3:108:199:7119:-623.549,-50.7377,0	1/1:195:5,190:5:171:190:6741:-567.885,-42.9787,0	0/1:96:24,72:24:856:72:2553:-198.493,0,-48.3846	1/1:680:1,679:1:36:679:24245:-2141.82,-201.103,0	0/1:396:134,262:134:4737:262:9334:-706.61,0,-307.214	1/1:80:0,80:0:0:80:2857:-249.889,-24.0824,0	1/1:482:0,482:0:0:482:17256:-1527.17,-145.096,0	0/1:191:58,133:58:2047:133:4729:-358.241,0,-126.956	0/1:170:46,124:46:1635:124:4414:-334.301,0,-96.2066	0/1:14:2,12:2:72:12:428:-34.2526,0,-2.62068	0/1:23:9,14:9:324:14:500:-37.7143,0,-22.5806	1/1:5:0,5:0:0:5:180:-16.3333,-1.50515,0	0/1:13:5,8:5:180:8:288:-22.0182,0,-12.6387	1/1:29:0,29:0:0:29:1040:-92.8521,-8.72987,0	0/1:422:193,229:193:6856:229:8169:-592.488,0,-489.627	0/1:211:65,146:65:2317:146:5196:-390.068,0,-145.007	1/1:101:0,101:0:0:101:3589:-318.45,-30.404,0	1/1:6:0,6:0:0:6:216:-19.2633,-1.80618,0	1/1:389:3,386:3:108:386:13777:-1209.92,-107.028,0	1/1:55:0,55:0:0:55:1968:-174.94,-16.5567,0	0/1:110:24,86:24:835:86:3051:-234.43,0,-42.3381	0/1:144:68,76:68:2423:76:2728:-194.493,0,-174.707	0/1:106:55,51:55:1928:51:1803:-127.664,0,-141.813	1/1:175:0,175:0:0:175:6186:-549.708,-52.6803,0	1/1:183:4,179:4:144:179:6406:-552.109,-41.7758,0	0/1:261:83,178:83:2971:178:6383:-484.406,0,-188.79	0/1:179:47,132:47:1671:132:4704:-361.966,0,-96.652	1/1:360:1,359:1:36:359:12826:-1121.5,-104.788,0	0/1:160:42,118:42:1496:118:4207:-321.276,0,-86.6846	0/1:15:8,7:8:288:7:252:-17.8747,0,-21.752	0/1:253:120,133:120:4272:133:4773:-349.17,0,-308.441	0/1:89:22,67:22:777:67:2412:-189.59,0,-43.3824	0/1:19:5,14:5:168:14:504:-38.6632,0,-9.73099	1/1:362:0,362:0:0:362:12909:-1137.84,-108.973,0	1/1:85:2,83:2:72:83:2976:-254.054,-18.7508,0	1/1:17:0,17:0:0:17:604:-54.4763,-5.11751,0	1/1:41:3,38:3:108:38:1368:-112.095,-2.26988,0	0/1:92:26,65:26:924:65:2290:-175.876,0,-55.8366	1/1:196:2,194:2:72:194:6945:-600.79,-52.1676,0	1/1:11:0,11:0:0:11:379:-33.1885,-3.31133,0	1/1:442:1,441:1:36:441:15708:-1380.84,-129.457,0	0/1:240:67,173:67:2391:173:6196:-471.783,0,-143.031	1/1:154:0,154:0:0:154:5491:-480.297,-46.3586,0	1/1:158:0,158:0:0:158:5618:-492.428,-47.5627,0	1/1:274:0,274:0:0:274:9790:-856.976,-82.4822,0	1/1:175:0,175:0:0:175:6227:-546.096,-52.6803,0	1/1:69:0,69:0:0:69:2480:-221.785,-20.7711,0	1/1:132:0,132:0:0:132:4685:-415.384,-39.736,0	0/1:139:51,88:51:1823:88:3139:-233.329,0,-122.407	0/1:30:13,17:13:468:17:612:-45.7496,0,-33.4248	0/1:150:46,104:46:1621:104:3680:-281.718,0,-101.014	1/1:196:0,196:0:0:196:6964:-611.168,-59.0019,0	1/1:268:0,268:0:0:268:9519:-844.875,-80.676,0	0/1:266:85,181:85:3033:181:6453:-485.41,0,-193.016	0/1:69:12,57:12:419:57:2034:-160.374,0,-17.267	1/1:254:1,253:1:36:253:9034:-794.519,-72.8644,0	0/1:11:1,10:1:36:10:360:-28.898,0,-0.285939	0/1:203:79,124:79:2796:124:4383:-324.736,0,-190.435	0/1:125:41,84:41:1450:84:2982:-226.394,0,-93.1418	1/1:406:0,406:0:0:406:14499:-1262.73,-122.218,0	1/1:159:1,158:1:36:158:5595:-481.256,-44.2655,0	1/1:159:0,159:0:0:159:5644:-494.69,-47.8638,0	0/1:182:93,89:93:3273:89:3159:-221.378,0,-239.454	0/1:269:148,121:148:5213:121:4307:-298.331,0,-387.336	1/1:68:0,68:0:0:68:2431:-213.263,-20.47,0	1/1:117:0,117:0:0:117:4196:-370.57,-35.2205,0	1/1:135:0,135:0:0:135:4809:-427.162,-40.6391,0	1/1:101:0,101:0:0:101:3603:-321.928,-30.404,0	0/1:184:89,95:89:3131:95:3385:-245.436,0,-225.713	0/1:147:78,69:78:2704:69:2442:-169.193,0,-199.246	1/1:351:0,351:0:0:351:12532:-1105.11,-105.662,0	1/1:205:0,205:0:0:205:7320:-643.025,-61.7112,0
chr04	32172921	.	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chr04	32236865	.	A	T	180415	PASS	AB=0.593702;ABP=349.318;AC=144;AF=0.765957;AN=188;AO=8421;CIGAR=1X;DP=10289;DPB=10289;DPRA=0;EPP=18289;EPPR=4059.32;GTI=4;LEN=1;MEANALT=1;MQM=59.9662;MQMR=59.9946;NS=94;NUMALT=1;ODDS=1.12184;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=301614;QR=66836;RO=1868;RPL=0;RPP=18289;RPPR=4059.32;RPR=8421;RUN=1;SAF=0;SAP=18289;SAR=8421;SRF=0;SRP=4059.32;SRR=1868;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:111:35,76:35:1248:76:2724:-211.989,0,-79.2105	1/1:66:0,66:0:0:66:2348:-211.545,-19.868,0	1/1:394:0,394:0:0:394:14072:-1266.24,-118.606,0	1/1:285:0,285:0:0:285:10229:-920.304,-85.7936,0	0/1:105:43,62:43:1548:62:2213:-167.825,0,-108.005	0/1:43:15,28:15:540:28:1004:-77.7316,0,-35.9922	0/1:63:38,25:38:1364:25:892:-61.6348,0,-104.096	1/1:247:4,243:4:129:243:8701:-771.152,-62.4267,0	1/1:144:0,144:0:0:144:5171:-465.528,-43.3483,0	1/1:77:0,77:0:0:77:2768:-249.361,-23.1793,0	0/1:16:7,9:7:243:9:324:-24.6894,0,-17.391	0/1:51:25,26:25:896:26:936:-69.2069,0,-65.6078	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	1/1:35:0,35:0:0:35:1252:-112.982,-10.5361,0	1/1:34:0,34:0:0:34:1220:-110.107,-10.235,0	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:8:6,2:6:216:2:68:-4.04947,0,-17.3823	0/1:180:78,102:78:2783:102:3672:-276.496,0,-196.525	0/1:232:82,150:82:2931:150:5369:-413.501,0,-194.185	0/1:155:70,85:70:2500:85:3048:-227.89,0,-178.593	1/1:210:2,208:2:72:208:7455:-664.156,-56.3796,0	1/1:100:9,91:9:324:91:3261:-264.203,-0.597146,0	0/1:109:47,62:47:1684:62:2228:-167.972,0,-119.035	1/1:390:0,390:0:0:390:13987:-1258.49,-117.402,0	0/1:230:95,135:95:3396:135:4833:-365.886,0,-236.619	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:303:0,303:0:0:303:10853:-976.667,-91.2121,0	0/1:172:64,108:64:2296:108:3861:-295.907,0,-155.124	0/1:219:82,137:82:2940:137:4897:-374.955,0,-198.908	0/1:14:4,10:4:144:10:356:-28.1668,0,-9.0992	0/1:37:15,22:15:540:22:792:-60.4676,0,-37.7984	0/1:19:9,10:9:324:10:360:-27.0247,0,-23.7863	0/1:16:4,12:4:144:12:428:-34.0423,0,-8.49714	1/1:51:0,51:0:0:51:1832:-165.161,-15.3525,0	0/1:88:37,51:37:1328:51:1832:-138.67,0,-93.3316	0/1:176:58,118:58:2072:118:4236:-328.437,0,-133.769	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:167:0,167:0:0:167:5992:-539.383,-50.272,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:261:99,162:99:3547:162:5808:-444.264,0,-240.869	0/1:25:14,11:14:504:11:392:-28.0943,0,-38.1723	0/1:22:13,9:13:464:9:324:-22.8832,0,-35.4748	1/1:204:0,204:0:0:204:7276:-654.889,-61.4101,0	1/1:184:0,184:0:0:184:6604:-594.248,-55.3895,0	0/1:215:100,115:100:3583:115:4136:-307.687,0,-257.955	0/1:130:58,72:58:2084:72:2584:-193.675,0,-148.696	1/1:167:0,167:0:0:167:5973:-537.648,-50.272,0	0/1:139:57,82:57:2040:82:2918:-221.009,0,-142.029	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:186:77,109:77:2760:109:3912:-296.281,0,-192.649	0/1:65:28,37:28:996:37:1324:-99.8951,0,-70.3879	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	1/1:153:0,153:0:0:153:5473:-492.589,-46.0576,0	1/1:61:0,61:0:0:61:2177:-196.194,-18.3628,0	1/1:40:0,40:0:0:40:1426:-128.566,-12.0412,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:97:36,61:36:1292:61:2196:-168.705,0,-87.3839	1/1:58:0,58:0:0:58:2084:-187.83,-17.4597,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:230:0,230:0:0:230:8238:-741.424,-69.2369,0	0/1:262:99,163:99:3540:163:5852:-447.92,0,-239.937	1/1:63:3,60:3:108:60:2160:-184.592,-8.88972,0	1/1:105:0,105:0:0:105:3756:-338.24,-31.6082,0	1/1:299:4,295:4:140:295:10545:-935.989,-77.0634,0	1/1:231:0,231:0:0:231:8281:-745.296,-69.5379,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:65:0,65:0:0:65:2336:-210.499,-19.567,0	0/1:33:21,12:21:743:12:422:-28.3803,0,-57.2593	0/1:16:3,13:3:108:13:460:-36.9189,0,-5.25869	0/1:198:63,135:63:2260:135:4837:-375.322,0,-144.059	1/1:85:0,85:0:0:85:3056:-275.268,-25.5876,0	1/1:274:1,273:1:36:273:9743:-873.112,-78.8839,0	0/1:220:84,136:84:3015:136:4879:-373.034,0,-205.353	0/1:140:51,89:51:1828:89:3196:-245.718,0,-122.657	1/1:142:0,142:0:0:142:5088:-458.061,-42.7463,0	0/1:23:5,18:5:180:18:633:-50.3714,0,-9.62837	0/1:118:42,76:42:1504:76:2718:-209.341,0,-100.133	0/1:137:51,86:51:1824:86:3048:-233.308,0,-123.2	1/1:291:0,291:0:0:291:10445:-939.962,-87.5997,0	1/1:52:0,52:0:0:52:1860:-167.68,-15.6536,0	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	0/1:23:12,11:12:432:11:396:-29.0591,0,-32.2975	0/1:72:40,32:40:1436:32:1144:-81.5954,0,-107.864	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:29:0,29:0:0:29:1036:-93.5539,-8.72987,0	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	1/1:12:0,12:0:0:12:413:-37.4978,-3.61236,0	0/1:49:32,17:32:1130:17:612:-40.663,0,-87.2565	0/1:41:32,9:32:1116:9:320:-16.8001,0,-88.4014	1/1:190:0,190:0:0:190:6783:-610.525,-57.1957,0	1/1:43:0,43:0:0:43:1548:-139.613,-12.9443,0
chr04	32343611	.	A	C	220643	PASS	AB=0.507799;ABP=6.1265;AC=144;AF=0.765957;AN=188;AO=10357;CIGAR=1X;DP=13295;DPB=13295;DPRA=0;EPP=22493;EPPR=6374.11;GTI=2;LEN=1;MEANALT=1.03191;MQM=59.9883;MQMR=59.9993;NS=94;NUMALT=1;ODDS=4.89611;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=370245;QR=105199;RO=2934;RPL=0;RPP=22493;RPPR=6374.11;RPR=10357;RUN=1;SAF=10357;SAP=22493;SAR=0;SRF=2934;SRP=6374.11;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:145:2,143:2:72:143:5097:-452.037,-36.8126,0	1/1:289:1,288:1:36:288:10308:-924.046,-83.3994,0	1/1:273:0,273:0:0:273:9760:-878.341,-82.1812,0	1/1:371:0,371:0:0:371:13233:-1190.77,-111.682,0	0/1:89:34,55:34:1216:55:1976:-151.323,0,-82.9549	0/1:39:18,21:18:648:21:756:-56.6271,0,-46.9117	0/1:146:76,70:76:2709:70:2497:-181.032,0,-200.102	1/1:269:0,269:0:0:269:9604:-864.305,-80.9771,0	1/1:202:0,200:0:0:200:7121:-640.593,-60.206,0	1/1:94:0,94:0:0:94:3368:-303.335,-28.2968,0	0/1:58:23,35:23:828:35:1252:-95.5253,0,-57.3844	0/1:124:65,59:65:2332:59:2096:-151.582,0,-172.812	1/1:80:0,80:0:0:80:2863:-257.907,-24.0824,0	1/1:86:0,86:0:0:86:3071:-276.618,-25.8886,0	1/1:73:0,73:0:0:73:2616:-235.688,-21.9752,0	1/1:84:0,84:0:0:84:3003:-270.501,-25.2865,0	0/1:41:18,23:18:648:23:828:-62.5019,0,-46.3097	1/1:23:0,23:0:0:23:810:-73.219,-6.92369,0	0/1:58:26,32:26:936:32:1152:-86.5304,0,-67.0997	0/1:293:137,156:137:4916:156:5592:-415.2,0,-354.388	0/1:285:147,138:147:5269:138:4920:-357.16,0,-388.55	0/1:156:97,58:97:3484:58:2072:-139.771,0,-266.79	1/1:297:3,294:3:108:294:10535:-937.987,-79.3307,0	1/1:113:9,104:9:320:104:3721:-305.943,-4.87403,0	0/1:161:71,90:71:2552:90:3216:-241.197,0,-181.464	1/1:381:1,380:1:36:380:13540:-1214.8,-111.094,0	0/1:435:200,235:200:7176:235:8416:-626.487,0,-514.946	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	1/1:361:0,361:0:0:361:12907:-1161.44,-108.672,0	0/1:305:129,176:129:4628:176:6312:-476.357,0,-324.868	0/1:199:105,94:105:3780:94:3352:-241.992,0,-280.492	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:16:2,14:2:72:14:504:-40.8816,0,-2.02024	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:17:13,4:13:464:4:144:-8.19611,0,-36.98	1/1:53:0,53:0:0:53:1904:-171.638,-15.9546,0	0/1:190:89,101:89:3196:101:3611:-267.999,0,-230.667	0/1:209:116,93:116:4157:93:3332:-237.182,0,-311.395	1/1:59:0,59:0:0:59:2101:-189.349,-17.7608,0	1/1:5:0,5:0:0:5:172:-15.818,-1.50515,0	1/1:119:4,115:4:144:115:4128:-358.389,-22.509,0	1/1:44:0,44:0:0:44:1576:-142.132,-13.2453,0	0/1:269:140,129:140:5002:129:4605:-333.637,0,-369.348	0/1:63:26,37:26:936:37:1324:-100.497,0,-65.5946	0/1:48:22,26:22:788:26:928:-69.3888,0,-56.7954	1/1:213:0,213:0:0:213:7620:-685.838,-64.1194,0	1/1:130:0,130:0:0:130:4649:-418.571,-39.1339,0	0/1:225:98,127:98:3520:127:4536:-340.676,0,-249.277	0/1:155:81,74:81:2908:74:2644:-191.547,0,-215.295	1/1:160:0,160:0:0:160:5748:-517.433,-48.1648,0	0/1:198:109,89:109:3908:89:3180:-226.821,0,-292.308	0/1:16:10,6:10:360:6:216:-14.974,0,-27.9278	0/1:128:56,72:56:2012:72:2584:-194.277,0,-142.821	0/1:114:56,58:56:1997:58:2084:-153.513,0,-145.685	0/1:8:1,7:1:36:7:248:-20.256,0,-1.19003	1/1:139:0,139:0:0:139:4969:-447.36,-41.8432,0	1/1:105:0,105:0:0:105:3760:-338.599,-31.6082,0	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:120:73,47:73:2616:47:1661:-113.653,0,-199.564	1/1:93:0,93:0:0:93:3336:-300.457,-27.9958,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:321:0,321:0:0:321:11446:-1030.02,-96.6306,0	0/1:333:165,168:165:5909:168:6015:-441.212,0,-431.674	1/1:88:1,87:1:36:87:3092:-274.909,-22.8924,0	1/1:119:0,119:0:0:119:4249:-382.588,-35.8226,0	1/1:256:0,256:0:0:256:9151:-823.563,-77.0637,0	1/1:425:5,420:5:180:420:15036:-1336.41,-111.386,0	1/1:45:0,45:0:0:45:1620:-146.09,-13.5464,0	1/1:105:0,105:0:0:105:3741:-336.872,-31.6082,0	0/1:35:14,21:14:504:21:756:-57.8312,0,-35.162	0/1:45:25,20:25:900:20:716:-51.2214,0,-67.7747	0/1:185:86,99:86:3088:99:3540:-263.119,0,-222.457	1/1:189:0,189:0:0:189:6761:-608.559,-56.8947,0	1/1:380:0,380:0:0:380:13563:-1220.46,-114.391,0	0/1:197:118,79:118:4221:79:2829:-195.546,0,-320.766	0/1:216:102,114:102:3668:114:4092:-303.442,0,-265.3	1/1:148:1,147:1:36:147:5248:-468.861,-40.9542,0	0/1:16:4,12:4:144:12:419:-33.2262,0,-8.49714	0/1:125:48,77:48:1713:77:2756:-210.643,0,-116.825	0/1:184:77,107:77:2753:107:3828:-289.319,0,-192.621	1/1:331:6,325:6:216:325:11623:-1026.15,-79.8504,0	1/1:64:0,64:0:0:64:2283:-205.731,-19.2659,0	1/1:64:0,64:0:0:64:2266:-204.202,-19.2659,0	0/1:48:31,17:31:1112:17:604:-40.2412,0,-85.9419	0/1:134:73,61:73:2620:61:2184:-156.488,0,-195.709	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:70:0,70:0:0:70:2516:-226.692,-21.0721,0	1/1:77:0,77:0:0:77:2755:-248.191,-23.1793,0	1/1:60:0,60:0:0:60:2151:-193.856,-18.0618,0	0/1:125:64,61:64:2273:61:2183:-159.107,0,-167.202	0/1:75:48,26:48:1728:26:924:-60.8418,0,-133.169	1/1:164:0,164:0:0:164:5860:-527.512,-49.3689,0	1/1:114:0,114:0:0:114:4064:-365.947,-34.3174,0
chr04	32386147	.	A	G	491913	PASS	AB=0.514786;ABP=36.7236;AC=144;AF=0.765957;AN=188;AO=23967;CIGAR=1X;DP=32628;DPB=32628;DPRA=0;EPP=52029.3;EPPR=18751.5;GTI=1;LEN=1;MEANALT=1.10638;MQM=59.8958;MQMR=59.9838;NS=94;NUMALT=1;ODDS=1.10999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=848606;QR=309121;RO=8650;RPL=2;RPP=52029.3;RPPR=18725.5;RPR=23965;RUN=1;SAF=0;SAP=52046.7;SAR=23967;SRF=3;SRP=18760.2;SRR=8647;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:45:0,45:0:0:45:1559:-140.594,-13.5464,0	1/1:206:3,203:3:104:203:7210:-639.189,-52.3094,0	1/1:97:0,97:0:0:97:3431:-309.001,-29.1999,0	1/1:163:0,163:0:0:163:5804:-522.475,-49.0679,0	0/1:74:33,41:33:1176:41:1450:-108.518,0,-83.8715	0/1:91:47,44:47:1692:44:1562:-113.476,0,-125.173	0/1:164:69,95:69:2472:95:3380:-255.046,0,-173.365	1/1:174:0,174:0:0:174:6136:-552.32,-52.3792,0	1/1:120:0,119:0:0:119:4230:-380.668,-35.8226,0	1/1:79:0,79:0:0:79:2812:-253.31,-23.7814,0	0/1:1290:645,645:645:23008:645:22762:-1659.67,0,-1681.78	0/1:130:73,57:73:2588:57:2010:-142.037,0,-194.034	1/1:93:1,92:1:36:92:3204:-284.983,-24.3975,0	1/1:215:0,215:0:0:215:7513:-676.214,-64.7215,0	1/1:82:0,82:0:0:82:2921:-263.125,-24.6845,0	1/1:174:0,174:0:0:174:6152:-553.777,-52.3792,0	0/1:150:75,75:75:2684:75:2667:-195.091,0,-196.65	1/1:83:0,83:0:0:83:2960:-266.626,-24.9855,0	0/1:467:220,246:220:7853:246:8689:-641.384,0,-566.308	0/1:137:60,77:60:2160:77:2739:-205.507,0,-153.426	0/1:191:106,85:106:3781:85:3023:-214.805,0,-282.99	0/1:48:32,16:32:1148:16:576:-37.6896,0,-89.1804	1/1:53:0,53:0:0:53:1889:-170.286,-15.9546,0	1/1:112:10,102:10:360:102:3637:-294.79,-0.971058,0	0/1:58:26,32:26:936:32:1140:-85.4495,0,-67.0997	1/1:178:0,178:0:0:178:6286:-565.571,-53.5833,0	0/1:276:135,141:135:4831:141:5010:-367.938,0,-351.859	1/1:47:0,47:0:0:47:1664:-150.045,-14.1484,0	1/1:356:0,356:0:0:356:12638:-1137.25,-107.167,0	0/1:166:83,83:83:2952:83:2958:-216.477,0,-215.941	0/1:126:61,65:61:2184:65:2320:-171.131,0,-158.896	0/1:902:405,497:405:14508:497:17588:-1310.58,0,-1033.93	0/1:1359:673,686:673:24056:686:24348:-1781.34,0,-1755.27	0/1:1175:573,601:573:20518:601:21311:-1563.78,0,-1492.36	0/1:1158:524,633:524:18760:633:22306:-1657.78,0,-1339.46	1/1:1756:1,1754:1:36:1754:62213:-5593.01,-525.069,0	0/1:241:121,120:121:4318:120:4232:-308.511,0,-316.248	0/1:241:116,125:116:4152:125:4449:-328.027,0,-301.315	1/1:986:0,986:0:0:986:34838:-3134.18,-296.816,0	1/1:1034:4,1030:4:144:1030:36536:-3273.34,-297.951,0	1/1:115:1,113:1:36:113:3964:-353.356,-31.079,0	1/1:418:0,418:0:0:418:14816:-1333.17,-125.831,0	0/1:74:35,39:35:1256:39:1387:-102.852,0,-91.0691	0/1:72:37,35:37:1319:35:1225:-88.8773,0,-97.337	0/1:79:39,40:39:1391:40:1389:-101.521,0,-101.707	1/1:61:0,61:0:0:61:2157:-194.396,-18.3628,0	1/1:123:0,123:0:0:123:4375:-393.819,-37.0267,0	0/1:138:69,69:69:2484:69:2451:-179.303,0,-182.271	0/1:80:42,38:42:1488:38:1356:-98.2581,0,-110.129	1/1:147:1,146:1:36:146:5219:-466.242,-40.6531,0	0/1:181:89,92:89:3172:92:3283:-241.203,0,-231.216	0/1:1204:576,628:576:20556:628:22335:-1647.04,0,-1487.07	0/1:174:96,78:96:3452:78:2762:-196.439,0,-258.512	0/1:18:12,6:12:428:6:207:-13.5484,0,-33.4403	0/1:1183:562,621:562:20092:621:21959:-1619.18,0,-1451.67	1/1:151:0,151:0:0:151:5352:-481.815,-45.4555,0	1/1:35:0,35:0:0:35:1247:-112.534,-10.5361,0	1/1:829:2,827:2:72:827:29242:-2623.81,-242.717,0	1/1:1161:1,1158:1:36:1158:41109:-3693.11,-345.655,0	0/1:96:57,39:57:2040:39:1368:-94.5122,0,-154.973	1/1:183:0,183:0:0:183:6471:-582.483,-55.0885,0	1/1:1085:1,1084:1:36:1084:38476:-3457.82,-323.019,0	1/1:37:1,36:1:36:36:1264:-110.462,-7.53984,0	0/1:263:117,146:117:4187:146:5146:-384.103,0,-297.84	1/1:154:10,144:10:360:144:5088:-425.319,-13.6143,0	1/1:63:0,63:0:0:63:2226:-200.603,-18.9649,0	1/1:85:2,83:2:72:83:2946:-258.536,-18.7508,0	1/1:123:2,121:2:68:121:4288:-379.64,-30.569,0	1/1:1208:0,1208:0:0:1208:42647:-3836.67,-363.644,0	1/1:105:0,105:0:0:105:3711:-334.193,-31.6082,0	0/1:125:68,57:68:2414:57:2008:-143.345,0,-179.887	0/1:707:310,396:310:11089:396:14046:-1051.12,0,-785.071	0/1:141:65,76:65:2315:76:2698:-200.582,0,-166.165	1/1:56:0,56:0:0:56:1989:-179.282,-16.8577,0	1/1:224:0,224:0:0:224:7953:-715.798,-67.4307,0	0/1:148:53,95:53:1889:95:3365:-258.512,0,-125.734	0/1:151:67,84:67:2382:84:2925:-218.028,0,-169.178	1/1:117:0,117:0:0:117:4170:-375.398,-35.2205,0	0/1:1312:638,673:638:22870:673:23855:-1751.09,0,-1662.79	0/1:84:39,45:39:1400:45:1600:-118.999,0,-101.013	0/1:67:29,38:29:1031:38:1325:-99.377,0,-72.9336	1/1:157:1,156:1:36:156:5495:-491.075,-43.6634,0	1/1:126:0,126:0:0:126:4441:-399.851,-37.9298,0	1/1:118:0,118:0:0:118:4140:-372.782,-35.5215,0	0/1:134:74,60:74:2633:60:2112:-150.009,0,-196.878	0/1:209:99,109:99:3556:109:3839:-282.854,0,-257.398	1/1:60:0,60:0:0:60:2143:-193.137,-18.0618,0	1/1:123:0,123:0:0:123:4335:-390.327,-37.0267,0	1/1:118:0,118:0:0:118:4144:-373.135,-35.5215,0	1/1:1492:1,1491:1:36:1491:52940:-4759.09,-445.538,0	0/1:2569:1290,1279:1290:45952:1279:45124:-3286.05,0,-3360.78	0/1:100:68,32:68:2444:32:1136:-72.445,0,-190.112	1/1:4:0,4:0:0:4:135:-12.4825,-1.20412,0	1/1:144:0,144:0:0:144:5069:-456.334,-43.3483,0
chr04	32414804	.	T	C	459417	PASS	AB=0.502673;ABP=3.66046;AC=144;AF=0.765957;AN=188;AO=17241;CIGAR=1X;DP=22511;DPB=22511;DPRA=0;EPP=37354.6;EPPR=11396.8;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.8314;MQMR=59.9658;NS=94;NUMALT=1;ODDS=14.0495;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=605658;QR=187333;RO=5263;RPL=9065;RPP=102.55;RPPR=4.08345;RPR=8176;RUN=1;SAF=9075;SAP=107.079;SAR=8166;SRF=2608;SRP=3.92172;SRR=2655;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:150:0,150:0:0:150:5228:-470.646,-45.1545,0	1/1:306:1,305:1:36:305:10708:-959.789,-88.5169,0	1/1:451:0,451:0:0:451:15845:-1425.68,-135.765,0	1/1:399:0,399:0:0:399:14012:-1260.81,-120.111,0	0/1:187:69,118:69:2472:118:4133:-315.792,0,-166.441	0/1:113:63,50:63:2230:50:1754:-124.123,0,-166.947	0/1:358:159,199:159:5627:199:6939:-516.791,0,-398.785	1/1:390:3,385:3:108:385:13514:-1205.83,-107.072,0	1/1:236:0,236:0:0:236:8175:-735.736,-71.0431,0	1/1:249:0,248:0:0:248:8709:-783.454,-74.6554,0	0/1:242:121,121:121:4340:121:4307:-314.959,0,-317.925	0/1:247:122,125:122:4349:125:4304:-313.175,0,-317.229	1/1:213:0,213:0:0:213:7508:-675.746,-64.1194,0	1/1:265:0,265:0:0:265:9309:-837.776,-79.773,0	1/1:225:0,225:0:0:225:7919:-712.738,-67.7318,0	1/1:202:0,202:0:0:202:7115:-640.375,-60.8081,0	0/1:185:97,88:97:3471:88:3103:-223.767,0,-256.894	1/1:159:0,159:0:0:159:5520:-496.898,-47.8638,0	0/1:120:72,48:72:2558:48:1707:-117.791,0,-194.346	0/1:404:195,209:195:6949:209:7383:-542.908,0,-503.776	0/1:395:189,206:189:6719:206:7230:-531.837,0,-485.881	0/1:191:118,73:118:4195:73:2583:-175.222,0,-320.237	1/1:221:0,221:0:0:221:7786:-700.739,-66.5276,0	1/1:317:14,303:14:500:303:10599:-908.486,-50.0903,0	0/1:224:109,115:109:3879:115:4044:-296.693,0,-281.876	1/1:457:0,457:0:0:457:16097:-1448.41,-137.571,0	0/1:577:292,285:292:10424:285:10013:-727.419,0,-764.39	1/1:91:0,91:0:0:91:3196:-287.851,-27.3937,0	1/1:455:1,454:1:36:454:15914:-1428.29,-133.37,0	0/1:243:130,113:130:4620:113:3945:-282.053,0,-342.814	0/1:227:110,117:110:3936:117:4130:-303.444,0,-286.099	0/1:16:8,8:8:288:8:288:-21.4463,0,-21.4509	0/1:56:29,27:29:1040:27:968:-70.5797,0,-77.0567	0/1:19:8,11:8:288:11:381:-28.9011,0,-20.5478	0/1:16:11,5:11:384:5:171:-10.9056,0,-30.0782	1/1:50:1,49:1:36:49:1723:-151.736,-11.4532,0	0/1:475:262,213:262:9327:213:7485:-530.703,0,-696.411	0/1:244:107,137:107:3782:137:4861:-364.19,0,-267.128	1/1:159:0,159:0:0:159:5594:-503.559,-47.8638,0	1/1:12:0,12:0:0:12:432:-39.2166,-3.61236,0	1/1:306:4,302:4:144:302:10586:-939.342,-78.8016,0	1/1:102:0,101:0:0:101:3572:-321.311,-30.404,0	0/1:461:236,225:236:8414:225:7928:-574.585,0,-618.49	0/1:230:117,113:117:4191:113:3985:-289.515,0,-308.134	0/1:175:81,94:81:2871:94:3262:-241.122,0,-205.089	1/1:276:1,275:1:36:275:9646:-864.497,-79.486,0	1/1:263:1,262:1:36:262:9177:-822.112,-75.5726,0	0/1:320:159,161:159:5661:161:5678:-414.806,0,-413.28	0/1:274:127,146:127:4536:146:5161:-381.721,0,-325.867	1/1:276:0,276:0:0:276:9684:-871.531,-83.0843,0	0/1:389:187,202:187:6680:202:7029:-515.396,0,-484.049	0/1:30:10,20:10:360:20:704:-54.6514,0,-23.7134	0/1:313:147,165:147:5227:165:5810:-428.877,0,-376.44	0/1:92:45,47:45:1594:47:1658:-121.801,0,-116.054	0/1:17:5,12:5:176:12:424:-33.3789,0,-11.0675	1/1:290:5,285:5:180:285:9983:-881.823,-70.7466,0	1/1:110:0,110:0:0:110:3842:-345.914,-33.1133,0	1/1:37:0,37:0:0:37:1288:-116.217,-11.1381,0	1/1:60:0,60:0:0:60:2119:-190.979,-18.0618,0	0/1:283:143,140:143:5083:140:4959:-361.267,0,-372.426	1/1:316:4,312:4:144:312:10993:-975.921,-81.8119,0	1/1:18:0,18:0:0:18:632:-57.2068,-5.41854,0	1/1:321:0,321:0:0:321:11340:-1020.49,-96.6306,0	0/1:385:213,172:213:7585:172:6064:-429.968,0,-566.794	1/1:192:9,183:9:320:183:6435:-550.098,-28.6554,0	1/1:161:1,160:1:36:160:5648:-504.881,-44.899,0	1/1:366:3,363:3:104:363:12752:-1137.76,-100.474,0	1/1:349:3,346:3:108:346:12252:-1092.43,-94.9843,0	1/1:151:0,151:0:0:151:5359:-482.44,-45.4555,0	1/1:209:0,209:0:0:209:7295:-656.585,-62.9153,0	0/1:215:108,107:108:3842:107:3776:-275.307,0,-281.256	0/1:69:36,33:36:1249:33:1161:-84.0231,0,-91.9361	0/1:226:120,106:120:4271:106:3709:-265.98,0,-316.534	1/1:228:2,226:2:68:226:7961:-710.034,-62.1771,0	1/1:524:0,524:0:0:524:18275:-1644.36,-157.74,0	0/1:352:169,183:169:5995:183:6451:-474.717,0,-433.697	0/1:315:134,181:134:4757:181:6394:-480.684,0,-333.466	1/1:311:0,311:0:0:311:10910:-981.759,-93.6203,0	0/1:35:12,23:12:428:23:815:-63.1347,0,-28.3228	0/1:292:128,164:128:4557:164:5704:-425.584,0,-322.396	0/1:323:172,151:172:6090:151:5363:-385.474,0,-450.816	1/1:471:2,469:2:72:469:16446:-1473.01,-134.948,0	1/1:182:0,182:0:0:182:6370:-573.366,-54.7875,0	1/1:249:1,248:1:36:248:8783:-786.853,-71.3582,0	0/1:227:111,116:111:3951:116:4024:-293.849,0,-287.444	0/1:383:189,194:189:6696:194:6817:-498.3,0,-487.414	1/1:71:0,71:0:0:71:2500:-225.228,-21.3731,0	1/1:186:0,186:0:0:186:6544:-589.027,-55.9916,0	1/1:185:0,185:0:0:185:6510:-585.974,-55.6906,0	1/1:220:0,220:0:0:220:7752:-697.72,-66.2266,0	0/1:318:162,156:162:5767:156:5469:-396.615,0,-423.418	0/1:211:125,86:125:4474:86:3052:-211.391,0,-339.311	1/1:296:0,296:0:0:296:103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chr04	32431968	.	G	A	25092.7	PASS	AB=0.473767;ABP=22.0364;AC=38;AF=0.202128;AN=188;AO=1535;CIGAR=1X;DP=8718;DPB=8718;DPRA=1.13386;EPP=3336.22;EPPR=15585.5;GTI=2;LEN=1;MEANALT=1.03922;MQM=59.456;MQMR=59.7191;NS=94;NUMALT=1;ODDS=3.89785;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54766;QR=256036;RO=7180;RPL=1533;RPP=3318.87;RPPR=15542.1;RPR=2;RUN=1;SAF=1533;SAP=3318.87;SAR=2;SRF=7175;SRP=15550.8;SRR=5;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/0:79:79,0:79:2844:0:0:0,-23.7814,-256.168	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.599	0/0:71:71,0:71:2507:0:0:0,-21.3731,-225.781	0/1:44:23,21:23:828:21:752:-54.7517,0,-61.5954	0/1:28:11,17:11:392:17:608:-46.6232,0,-27.185	0/1:40:22,18:22:779:18:648:-46.6107,0,-58.3909	0/0:54:54,0:54:1932:0:0:0,-16.2556,-174.144	0/0:77:77,0:77:2728:0:0:0,-23.1793,-245.615	0/0:45:45,0:45:1601:0:0:0,-13.5463,-144.377	0/1:177:156,21:156:5582:21:748:-14.3583,0,-449.212	0/1:63:26,37:26:916:37:1328:-100.849,0,-63.7043	0/0:67:67,0:67:2386:0:0:0,-20.169,-214.978	0/0:55:55,0:55:1927:0:0:0,-16.5566,-173.697	0/0:59:59,0:59:2095:0:0:0,-17.7608,-188.817	0/0:31:31,0:31:1095:0:0:0,-9.33193,-98.8206	0/1:69:28,41:28:992:41:1464:-111.263,0,-68.7813	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.056	0/1:102:86,16:86:3039:16:557:-19.7472,0,-243.034	0/1:60:20,40:20:716:40:1430:-110.802,0,-46.7028	0/1:110:52,58:52:1856:58:2068:-153.249,0,-134.187	0/1:63:15,48:15:521:48:1724:-136.474,0,-28.2514	0/0:66:66,0:66:2337:0:0:0,-19.868,-210.506	0/1:48:40,8:40:1427:8:288:-11.818,0,-114.267	0/1:29:14,15:14:496:15:528:-39.106,0,-36.241	0/0:157:157,0:157:5628:0:0:0,-47.2617,-506.593	0/1:94:49,45:49:1760:45:1607:-116.622,0,-130.378	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1942	0/0:96:96,0:96:3407:0:0:0,-28.8989,-305.563	0/1:97:60,37:60:2139:37:1316:-89.5354,0,-163.555	0/1:63:23,40:23:805:40:1436:-110.57,0,-53.8026	0/0:197:197,0:197:7050:0:0:0,-59.3029,-634.542	0/0:114:112,2:112:4028:2:72:0,-27.4807,-355.844	0/0:104:103,1:103:3682:1:36:0,-27.7088,-327.953	0/0:169:165,4:165:5913:4:134:0,-38.5737,-519.84	0/0:172:172,0:172:6168:0:0:0,-51.7772,-555.136	0/1:215:91,123:91:3236:123:4380:-329.566,0,-226.68	0/1:121:45,76:45:1603:76:2728:-209.332,0,-108.133	0/0:300:300,0:300:10672:0:0:0,-90.309,-960.343	0/0:112:111,1:111:3964:1:36:0,-30.1171,-353.328	0/0:51:51,0:51:1797:0:0:0,-15.3525,-162.007	0/0:350:350,0:350:12536:0:0:0,-105.36,-1128.02	0/1:108:43,65:43:1522:65:2325:-176.954,0,-104.598	0/1:63:26,37:26:921:37:1328:-100.855,0,-64.2403	0/1:66:33,33:33:1180:33:1174:-86.0934,0,-86.6382	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/0:48:48,0:48:1710:0:0:0,-14.4494,-154.116	0/1:29:18,11:18:648:11:383:-26.0709,0,-49.922	0/1:70:33,37:33:1180:37:1321:-98.1108,0,-85.4344	0/0:52:52,0:52:1859:0:0:0,-15.6536,-166.799	0/1:126:61,65:61:2184:65:2315:-169.818,0,-158.896	0/0:103:100,3:100:3575:3:108:0,-20.9309,-311.871	0/1:85:27,58:27:963:58:2076:-161.487,0,-61.3984	0/1:21:6,15:6:212:15:540:-42.6149,0,-13.1028	0/0:186:182,4:182:6495:4:144:0,-42.678,-569.876	0/0:33:33,0:33:1173:0:0:0,-9.93399,-105.861	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/0:181:181,0:181:6457:0:0:0,-54.4864,-581.209	0/0:330:329,1:329:11703:1:32:0,-96.141,-1049.91	0/1:47:19,28:19:671:28:1004:-76.5044,0,-46.5674	0/0:165:165,0:165:5904:0:0:0,-49.6699,-531.144	0/0:190:187,3:187:6695:3:108:0,-47.1205,-592.534	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.866	0/1:124:45,79:45:1612:79:2828:-217.293,0,-108.038	0/0:51:51,0:51:1823:0:0:0,-15.3525,-164.347	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.0514	0/0:74:73,0:73:2602:0:0:0,-21.9752,-234.056	0/0:69:67,1:67:2395:1:36:0,-17.2316,-212.207	0/0:190:190,0:190:6765:0:0:0,-57.1957,-608.881	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/1:76:36,40:36:1273:40:1440:-106.754,0,-91.9926	0/0:203:200,3:200:7138:3:104:0,-51.4087,-632.663	0/1:62:29,33:29:1035:33:1180:-87.6938,0,-74.7992	0/0:43:42,1:42:1504:1:36:0,-9.34601,-132.049	0/1:111:42,69:42:1512:69:2449:-187.224,0,-102.848	0/1:46:24,22:24:864:22:784:-57.0318,0,-63.3746	0/1:33:17,16:17:608:16:572:-41.8712,0,-45.118	0/0:36:35,1:35:1252:1:36:0,-7.2388,-108.631	0/0:158:156,2:156:5591:2:72:0,-40.726,-496.378	0/1:34:16,18:16:576:18:631:-46.8798,0,-41.94	0/1:46:23,23:23:824:23:805:-58.906,0,-60.6359	0/0:50:50,0:50:1780:0:0:0,-15.0515,-160.474	0/0:87:87,0:87:3097:0:0:0,-26.1896,-278.949	0/0:36:36,0:36:1278:0:0:0,-10.8371,-115.32	0/1:95:41,54:41:1453:54:1932:-145.486,0,-102.465	0/1:145:71,74:71:2509:74:2652:-195.215,0,-182.371	0/0:29:29,0:29:1016:0:0:0,-8.72987,-91.749	0/0:80:80,0:80:2835:0:0:0,-24.0824,-255.374	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.561	0/0:271:271,0:271:9593:0:0:0,-81.5791,-863.277	0/1:310:280,30:280:9949:30:1061:-2.44841,0,-801.885	0/1:63:23,40:23:828:40:1402:-107.507,0,-55.8777	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:86:86,0:86:3048:0:0:0,-25.8886,-274.531
chr04	32564834	.	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chr04	32706896	.	T	A	41303.9	PASS	AB=0.500406;ABP=3.01735;AC=45;AF=0.239362;AN=188;AO=2482;CIGAR=1X;DP=10258;DPB=10258;DPRA=1.14916;EPP=5392.6;EPPR=16868.8;GTI=0;LEN=1;MEANALT=1.13462;MQM=54.0246;MQMR=59.5859;NS=94;NUMALT=1;ODDS=5.69814;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88645;QR=276663;RO=7767;RPL=2482;RPP=5392.6;RPPR=16868.8;RPR=0;RUN=1;SAF=2482;SAP=5392.6;SAR=0;SRF=7767;SRP=16868.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:81:81,0:81:2904:0:0:0,-24.3834,-261.394	0/0:59:59,0:59:2098:0:0:0,-17.7608,-189.051	0/0:145:145,0:145:5141:0:0:0,-43.6493,-462.12	0/0:212:212,0:212:7557:0:0:0,-63.8184,-680.082	0/1:58:34,24:34:1211:24:846:-58.8556,0,-91.8189	0/1:27:12,15:12:423:15:540:-40.6714,0,-30.269	0/1:77:27,50:27:964:50:1788:-137.827,0,-63.8975	0/0:198:198,0:198:7039:0:0:0,-59.6039,-631.957	0/0:151:151,0:151:5341:0:0:0,-45.4555,-480.738	0/0:89:89,0:89:3168:0:0:0,-26.7917,-285.341	0/1:84:36,48:36:1296:48:1715:-128.876,0,-91.648	0/0:131:131,0:131:4673:0:0:0,-39.4349,-420.454	0/0:137:136,0:136:4875:0:0:0,-40.9401,-438.427	0/0:120:120,0:120:4300:0:0:0,-36.1236,-387.135	0/0:113:113,0:113:4056:0:0:0,-34.0164,-365.21	0/0:119:119,0:119:4224:0:0:0,-35.8226,-379.295	0/1:51:28,22:28:1000:22:784:-55.2701,0,-74.8887	0/0:50:50,0:50:1783:0:0:0,-15.0515,-160.749	0/1:70:35,35:35:1256:35:1256:-91.0415,0,-92.2487	0/1:154:98,56:98:3481:56:1986:-132.257,0,-267.115	0/1:177:90,87:90:3236:87:3081:-222.338,0,-238.147	0/1:145:53,92:53:1886:92:3292:-252.519,0,-125.821	0/0:140:140,0:140:4988:0:0:0,-42.1442,-449.043	0/0:114:113,1:113:4031:1:36:0,-30.7242,-359.319	0/1:134:81,52:81:2891:52:1844:-125.287,0,-220.007	0/0:320:320,0:320:11398:0:0:0,-96.3296,-1025.52	0/1:260:108,152:108:3855:152:5436:-409.357,0,-268.849	0/0:43:43,0:43:1527:0:0:0,-12.9443,-137.718	0/0:214:214,0:214:7628:0:0:0,-64.4204,-685.895	0/1:93:59,34:59:2103:34:1224:-82.311,0,-161.375	0/1:107:53,53:53:1876:53:1899:-138.547,0,-136.926	0/1:14:10,4:10:356:4:144:-9.08032,0,-28.1603	0/1:52:30,22:30:1050:22:777:-54.483,0,-79.1522	0/1:10:5,5:5:180:5:176:-12.5007,0,-13.5334	0/1:18:9,9:9:311:9:324:-23.8294,0,-22.9041	0/0:22:22,0:22:783:0:0:0,-6.62266,-70.7399	0/1:295:162,132:162:5792:132:4709:-333.91,0,-432.442	0/1:161:75,86:75:2656:86:3049:-225.377,0,-190.815	0/0:68:68,0:68:2435:0:0:0,-20.47,-219.364	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:104:101,3:101:3580:3:108:0,-21.2462,-312.313	0/0:45:45,0:45:1608:0:0:0,-13.5463,-145.005	0/1:221:120,101:120:4273:101:3611:-256.439,0,-318.207	0/1:79:44,35:44:1549:35:1247:-88.327,0,-115.9	0/1:72:36,36:36:1275:36:1287:-94.2062,0,-93.3605	0/0:153:153,0:153:5431:0:0:0,-46.0576,-488.837	0/0:110:110,0:110:3918:0:0:0,-33.1133,-352.69	0/1:146:59,87:59:2103:87:3112:-235.874,0,-145.581	0/1:117:59,58:59:2103:58:2088:-152.763,0,-154.307	0/0:105:105,0:105:3738:0:0:0,-31.6081,-336.612	0/1:187:81,106:81:2903:106:3795:-284.971,0,-205.202	0/1:18:11,7:11:387:7:252:-17.5088,0,-29.7471	0/1:158:83,75:83:2975:75:2688:-193.699,0,-220.205	0/1:64:36,28:36:1279:28:1008:-71.7436,0,-96.1465	0/1:37:16,21:16:576:21:744:-55.7855,0,-41.0369	0/0:174:174,0:174:6175:0:0:0,-52.3792,-555.785	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.681	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.0947	0/0:29:29,0:29:1032:0:0:0,-8.72987,-93.1931	0/1:130:69,61:69:2459:61:2163:-154.431,0,-182.334	0/0:141:139,2:139:4941:2:72:0,-35.6134,-437.958	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4573	0/0:139:139,0:139:4967:0:0:0,-41.8432,-447.09	0/1:220:117,102:117:4164:102:3647:-261.654,0,-308.641	0/0:90:85,5:85:3026:5:169:0,-11.5822,-257.037	0/0:61:61,0:61:2170:0:0:0,-18.3628,-195.561	0/0:175:174,1:174:6155:1:36:0,-49.0846,-550.325	0/0:237:233,4:233:8297:4:140:0,-58.41,-733.793	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.813	0/0:87:87,0:87:3103:0:0:0,-26.1896,-279.424	0/1:91:38,53:38:1351:53:1900:-143.682,0,-94.4959	0/1:32:13,19:13:464:19:684:-52.1286,0,-32.4645	0/1:223:109,114:109:3904:114:4079:-298.067,0,-284.314	0/0:82:82,0:82:2916:0:0:0,-24.6845,-262.654	0/1:101:54,47:54:1900:47:1655:-118.167,0,-140.852	0/1:140:63,76:63:2232:76:2715:-201.619,0,-158.93	0/1:117:56,61:56:1989:61:2184:-160.919,0,-144.046	0/0:89:89,0:89:3180:0:0:0,-26.7917,-285.616	0/1:27:8,19:8:288:19:672:-52.1731,0,-18.0524	0/1:63:33,30:33:1184:30:1076:-77.529,0,-87.9034	0/1:95:65,30:65:2297:30:1071:-67.2856,0,-178.382	0/0:237:236,1:236:8402:1:36:0,-67.7484,-752.509	0/0:126:126,0:126:4492:0:0:0,-37.9298,-404.437	0/0:83:83,0:83:2967:0:0:0,-24.9855,-267.253	0/1:59:30,29:30:1076:29:1036:-75.7107,0,-79.3921	0/1:207:109,98:109:3904:98:3518:-253.49,0,-288.443	0/0:32:31,0:31:1108:0:0:0,-9.33193,-99.6558	0/0:103:103,0:103:3683:0:0:0,-31.0061,-331.615	0/0:79:79,0:79:2814:0:0:0,-23.7814,-253.467	0/1:56:31,25:31:1116:25:900:-64.3123,0,-83.894	0/1:179:81,98:81:2847:98:3503:-260.939,0,-202.557	0/1:100:28,71:28:995:71:2543:-197.448,0,-59.6993	0/0:89:89,0:89:3157:0:0:0,-26.7917,-284.35	0/0:128:128,0:128:4587:0:0:0,-38.5318,-412.973
chr04	32822495	.	GCA	GCG,ACG	275390	PASS	AB=0.486784,0.509112;ABP=12.2513,7.4028;AC=143,45;AF=0.760638,0.239362;AN=188;AO=9888,3132;CIGAR=2M1X,1X1M1X;DP=13072;DPB=13077;DPRA=0,1.1059;EPP=21457.2,6804.06;EPPR=13.8677;GTI=0;LEN=1,3;MEANALT=2.07447,2.5082;MQM=59.9828,59.9496;MQMR=56.4;NS=94;NUMALT=2;ODDS=8.68327;PAIRED=0,0;PAIREDR=0;PAO=0,15;PQA=0,532;PQR=0;PRO=0;QA=349873,107588;QR=170;RO=5;RPL=9876,3129;RPP=21370.4,6778.03;RPPR=6.91895;RPR=12,3;RUN=1,1;SAF=9876,3129;SAP=21370.4,6778.03;SAR=12,3;SRF=1;SRP=6.91895;SRR=4;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:47:0,46,1:0:0:46,1:1601,36:-144.001,-13.8474,0,-141.063,-10.5501,-140.762	1/1:210:0,208,2:0:0:208,2:7395,72:-665.238,-62.6142,0,-659.363,-56.3796,-658.761	1/1:143:0,143,0:0:0:143,0:5049,0:-454.559,-43.0473,0,-454.559,-43.0473,-454.559	1/1:309:0,307,1:0:0:307,1:10787,36:-970.471,-92.4162,0,-967.534,-89.3989,-967.233	1/2:80:0,32,48:0:0:32,48:1127,1639:-225.095,-133.343,-123.71,-92.0999,0,-77.6504	1/2:118:0,66,52:0:0:66,52:2350,1802:-338.345,-146.806,-126.938,-191.89,0,-176.236	1/2:169:0,76,93:0:0:76,93:2690,3151:-474.939,-255.821,-232.943,-219.465,0,-191.469	1/1:291:0,289,0:0:0:289,0:10227,0:-918.754,-86.9977,0,-918.754,-86.9977,-918.754	1/1:233:0,233,0:0:0:233,0:8279,0:-745.126,-70.14,0,-745.126,-70.14,-745.126	1/1:123:0,123,0:0:0:123,0:4375,0:-393.923,-37.0267,0,-393.923,-37.0267,-393.923	1/2:138:0,76,62:0:0:76,62:2685,2136:-392.15,-173.482,-150.604,-218.657,0,-199.993	1/1:122:0,122,0:0:0:122,0:4291,0:-386.362,-36.7257,0,-386.362,-36.7257,-386.362	1/1:128:0,128,0:0:0:128,0:4544,0:-409.131,-38.5318,0,-409.131,-38.5318,-409.131	1/1:450:0,447,1:0:0:447,1:15738,36:-1415.78,-134.56,0,-1412.84,-131.623,-1412.54	1/1:108:0,108,0:0:0:108,0:3787,0:-341.027,-32.5112,0,-341.027,-32.5112,-341.027	1/1:115:0,115,0:0:0:115,0:4074,0:-366.849,-34.6185,0,-366.849,-34.6185,-366.849	1/2:124:0,59,64:0:0:59,64:2090,2240:-352.604,-182.347,-164.586,-170.356,0,-151.091	1/1:112:0,112,0:0:0:112,0:3954,0:-356.043,-33.7154,0,-356.043,-33.7154,-356.043	1/2:96:0,58,37:0:0:58,37:2056,1305:-273.83,-106.331,-88.8717,-167.569,0,-156.431	1/2:211:0,101,109:0:0:101,109:3593,3732:-595.819,-302.996,-272.592,-292.892,0,-260.08	1/2:203:0,110,92:0:0:110,92:3898,3150:-573.231,-255.676,-222.563,-317.543,0,-289.849	1/2:127:0,37,88:0:0:37,88:1311,2992:-349.54,-242.737,-231.598,-106.864,0,-80.3737	1/1:286:0,284,0:0:0:284,0:10058,0:-904.803,-85.4925,0,-904.803,-85.4925,-904.803	1/1:122:0,118,4:0:0:118,4:4173,144:-375.393,-35.5215,0,-363.643,-23.412,-362.439	1/2:87:0,47,40:0:0:47,40:1632,1389:-245.934,-113.264,-99.1158,-133.017,0,-120.976	1/1:385:0,379,2:0:0:379,2:13377,67:-1203.44,-114.09,0,-1198.02,-108.645,-1197.42	1/2:287:0,134,152:0:0:134,152:4713,5204:-806.138,-422.505,-382.167,-383.729,0,-337.973	1/1:47:0,47,0:0:0:47,0:1676,0:-151.127,-14.1484,0,-151.127,-14.1484,-151.127	1/1:325:0,324,0:0:0:324,0:11431,0:-1028.32,-97.5337,0,-1028.32,-97.5337,-1028.32	1/2:143:0,73,68:0:0:73,68:2547,2362:-399.075,-191.918,-169.943,-207.184,0,-186.714	1/2:294:0,152,142:0:0:152,142:5397,4948:-842.107,-402.352,-356.596,-440.106,0,-397.36	1/2:15:0,6,9:0:0:6,9:196,317:-41.9794,-26.1605,-24.3543,-16.1558,0,-13.4465	1/2:26:0,11,15:0:0:11,15:392,527:-75.1995,-43.2448,-39.9335,-32.3087,0,-27.7933	1/2:11:0,3,8:0:0:3,8:108,254:-29.5864,-20.7626,-19.8595,-9.17208,0,-6.76384	1/2:22:0,10,12:0:0:10,12:360,413:-63.2676,-33.8862,-30.8759,-29.734,0,-26.1216	1/1:45:0,45,0:0:0:45,0:1601,0:-144.378,-13.5464,0,-144.378,-13.5464,-144.378	1/2:269:1,137,131:1:28:137,131:4783,4558:-757.151,-368.41,-329.387,-386.842,0,-349.625	1/2:193:0,97,94:0:0:97,94:3433,3224:-541.433,-261.806,-232.606,-279.693,0,-251.396	1/1:152:1,151,0:1:34:151,0:5349,0:-478.152,-42.3634,0,-478.453,-45.4555,-481.206	1/1:7:0,7,0:0:0:7,0:244,0:-22.2994,-2.10721,0,-22.2994,-2.10721,-22.2994	1/1:181:0,175,2:0:0:175,2:6204,63:-558.151,-52.6803,0,-553.085,-47.6099,-552.483	1/1:69:0,69,0:0:0:69,0:2440,0:-219.818,-20.7711,0,-219.818,-20.7711,-219.818	1/2:177:0,90,86:0:0:90,86:3185,2935:-497.415,-237.984,-210.891,-259.491,0,-233.602	1/2:155:0,80,75:0:0:80,75:2843,2587:-441.818,-210.142,-186.059,-231.667,0,-209.09	1/2:85:0,42,43:0:0:42,43:1491,1437:-238.169,-116.674,-104.031,-121.84,0,-108.896	1/1:108:0,108,0:0:0:108,0:3812,0:-343.278,-32.5112,0,-343.278,-32.5112,-343.278	1/1:135:0,135,0:0:0:135,0:4753,0:-427.93,-40.6391,0,-427.93,-40.6391,-427.93	1/2:212:0,99,113:0:0:99,113:3533,3842:-599.996,-311.969,-282.167,-288.376,0,-254.36	1/2:61:0,25,36:0:0:25,36:881,1234:-172.253,-100.521,-92.9952,-72.0801,0,-61.243	1/1:131:1,129,1:1:36:129,1:4603,27:-410.879,-35.853,0,-409.052,-36.7489,-411.686	1/2:216:0,95,120:0:0:95,120:3353,4102:-605.952,-332.912,-304.314,-273.048,0,-236.925	1/2:10:0,5,5:0:0:5,5:180,178:-29.5526,-14.8635,-13.3583,-15.0469,0,-13.5418	1/2:148:0,73,74:0:0:73,74:2580,2565:-418.601,-208.478,-186.503,-210.128,0,-187.852	1/2:74:0,28,46:0:0:28,46:991,1580:-209.364,-128.639,-120.21,-81.0747,0,-67.2273	1/2:16:0,5,10:0:0:5,10:176,329:-40.8952,-26.5609,-25.0557,-14.3214,0,-11.3111	1/1:140:0,139,1:0:0:139,1:4916,36:-442.234,-41.8432,0,-439.296,-38.5459,-438.995	1/1:75:0,74,1:0:0:74,1:2643,34:-237.776,-22.2762,0,-235.018,-19.1783,-234.717	1/1:23:0,23,0:0:0:23,0:828,0:-74.8441,-6.92369,0,-74.8441,-6.92369,-74.8441	1/1:15:0,15,0:0:0:15,0:531,0:-48.1219,-4.51545,0,-48.1219,-4.51545,-48.1219	1/2:110:0,65,45:0:0:65,45:2300,1520:-310.888,-123.54,-103.973,-187.692,0,-174.146	1/1:161:0,161,0:0:0:161,0:5721,0:-515.011,-48.4658,0,-515.011,-48.4658,-515.011	1/1:8:0,8,0:0:0:8,0:279,0:-25.4475,-2.40824,0,-25.4475,-2.40824,-25.4475	1/1:201:0,199,1:0:0:199,1:7087,34:-637.542,-59.905,0,-634.784,-57.1569,-634.483	1/2:185:0,86,99:0:0:86,99:3059,3413:-526.886,-277.585,-251.697,-249.651,0,-219.849	1/1:97:0,88,9:0:0:88,9:3124,314:-281.036,-26.4906,0,-255.498,-0.603265,-252.789	1/1:63:0,60,0:0:0:60,0:2134,0:-192.009,-18.0618,0,-192.009,-18.0618,-192.009	1/1:169:1,168,0:1:36:168,0:5928,0:-530.039,-47.2784,0,-530.34,-50.573,-533.275	1/1:190:0,190,0:0:0:190,0:6741,0:-606.768,-57.1957,0,-606.768,-57.1957,-606.768	1/1:65:0,63,2:0:0:63,2:2228,70:-200.433,-18.9649,0,-194.738,-12.9196,-194.136	1/1:109:0,109,0:0:0:109,0:3873,0:-348.766,-32.8123,0,-348.766,-32.8123,-348.766	1/2:124:0,61,63:0:0:61,63:2161,2194:-354.442,-178.4,-160.037,-176.033,0,-157.068	1/2:51:0,32,18:0:0:32,18:1152,583:-141.097,-47.0756,-37.4426,-94.0748,0,-88.6563	1/2:121:0,49,72:0:0:49,72:1738,2505:-345.268,-203.668,-188.917,-141.593,0,-119.919	1/1:115:0,114,1:0:0:114,1:4013,34:-361.019,-34.3174,0,-358.261,-31.2195,-357.96	1/2:305:0,144,160:0:0:144,160:5124,5444:-859.193,-441.585,-398.237,-417.596,0,-369.431	1/2:191:0,93,96:0:0:93,96:3307,3322:-539.473,-269.969,-241.973,-269.519,0,-240.62	1/2:207:0,118,89:0:0:118,89:4213,3021:-588.323,-244.841,-209.319,-343.828,0,-317.037	1/1:119:0,118,1:0:0:118,1:4165,36:-374.674,-35.5215,0,-371.737,-32.2243,-371.436	1/2:23:0,10,13:0:0:10,13:352,451:-65.665,-37.0067,-33.9964,-29.0079,0,-25.0945	1/2:112:0,52,60:0:0:52,60:1855,2061:-318.92,-167.695,-152.042,-151.575,0,-133.514	1/2:109:0,35,71:0:0:35,71:1225,2406:-294.783,-195.113,-184.577,-99.7054,0,-78.3323	1/1:291:1,290,0:1:36:290,0:10255,0:-919.287,-84.0015,0,-919.588,-87.2987,-922.525	1/1:143:0,142,0:0:0:142,0:5050,0:-454.288,-42.7463,0,-454.288,-42.7463,-454.288	1/1:122:0,122,0:0:0:122,0:4299,0:-387.089,-36.7257,0,-387.089,-36.7257,-387.089	1/2:136:0,72,64:0:0:72,64:2548,2217:-388.074,-180.528,-158.854,-207.895,0,-188.629	1/2:217:0,110,107:0:0:110,107:3890,3680:-615.714,-298.881,-265.767,-316.861,0,-284.651	1/1:59:0,59,0:0:0:59,0:2062,0:-185.778,-17.7608,0,-185.778,-17.7608,-185.778	1/1:118:0,118,0:0:0:118,0:4183,0:-376.654,-35.5215,0,-376.654,-35.5215,-376.654	1/1:111:0,111,0:0:0:111,0:3936,0:-354.433,-33.4143,0,-354.433,-33.4143,-354.433	1/2:97:0,62,34:0:0:62,34:2211,1168:-275.088,-94.846,-76.1822,-180.25,0,-170.015	1/2:222:0,116,105:0:0:116,105:4093,3626:-627.873,-294.581,-259.662,-333.28,0,-301.672	1/2:114:0,33,81:0:0:33,81:1175,2770:-320.931,-225.159,-215.225,-96.123,0,-71.7395	1/1:40:0,39,1:0:0:39,1:1388,36:-124.859,-11.7402,0,-121.922,-8.44293,-121.621	1/1:163:0,161,0:0:0:161,0:5690,0:-511.862,-48.4658,0,-511.862,-48.4658,-511.862
chr04	32848412	.	G	A	253887	PASS	AB=0.595618;ABP=470.598;AC=143;AF=0.760638;AN=188;AO=10447;CIGAR=1X;DP=12864;DPB=12864;DPRA=0;EPP=22454.5;EPPR=5169.17;GTI=2;LEN=1;MEANALT=1.05319;MQM=50.1646;MQMR=59.7578;NS=94;NUMALT=1;ODDS=0.427412;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=371250;QR=86238;RO=2411;RPL=7183;RPP=3195.38;RPPR=5049.08;RPR=3264;RUN=1;SAF=7210;SAP=3283.96;SAR=3237;SRF=2397;SRP=5117.53;SRR=14;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:44:0,44:0:0:44:1576:-138.645,-13.2453,0	1/1:171:0,171:0:0:171:6088:-537.128,-51.4761,0	1/1:193:2,191:2:72:191:6808:-588.692,-51.2621,0	1/1:318:1,317:1:36:317:11251:-890.455,-92.1293,0	0/1:130:47,83:47:1688:83:2972:-209.344,0,-113.073	0/1:100:49,51:49:1760:51:1820:-132.359,0,-128.581	0/1:214:78,136:78:2796:136:4828:-328.583,0,-187.46	1/1:187:0,187:0:0:187:6696:-592.518,-56.2926,0	1/1:111:0,111:0:0:111:3944:-348.979,-33.4143,0	1/1:118:1,117:1:36:117:4106:-322.586,-31.9233,0	0/1:93:37,56:37:1323:56:2008:-145.744,0,-90.8172	1/1:98:1,97:1:32:97:3476:-306.084,-26.3016,0	1/1:99:0,99:0:0:99:3532:-312.689,-29.802,0	1/1:129:0,129:0:0:129:4576:-386.894,-38.8329,0	1/1:110:0,110:0:0:110:3912:-332.372,-33.1133,0	1/1:101:0,101:0:0:101:3593:-300.82,-30.404,0	0/1:98:36,62:36:1292:62:2212:-166.627,0,-87.0828	1/1:60:1,59:1:36:59:2101:-184.07,-14.4635,0	0/1:82:37,45:37:1324:45:1608:-119.955,0,-94.7776	0/1:276:95,181:95:3395:181:6341:-426.541,0,-220.462	0/1:189:67,122:67:2370:122:4307:-291.113,0,-156.663	0/1:69:43,26:43:1536:26:928:-56.4932,0,-116.571	1/1:149:0,149:0:0:149:5295:-424.713,-44.8535,0	1/1:270:16,254:16:572:254:9038:-684.485,-29.4647,0	0/1:111:46,65:46:1652:65:2299:-158.034,0,-115.554	1/1:352:0,352:0:0:352:12518:-1046.73,-105.963,0	0/1:273:103,170:103:3686:170:6063:-411.974,0,-249.532	1/1:69:0,69:0:0:69:2464:-202.019,-20.7711,0	1/1:351:0,351:0:0:351:12436:-1017.89,-105.662,0	0/1:140:52,88:52:1855:88:3125:-218.598,0,-125.085	0/1:169:73,96:73:2615:96:3373:-229.469,0,-184.723	0/1:10:3,7:3:108:7:244:-15.1669,0,-7.06487	0/1:17:6,11:6:201:11:392:-26.3928,0,-13.2995	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:11:7,4:7:248:4:144:-9.62244,0,-19.3529	1/1:10:0,10:0:0:10:360:-32.1789,-3.0103,0	0/1:210:95,115:95:3404:115:4073:-286.373,0,-241.82	0/1:140:55,85:55:1964:85:2992:-203.83,0,-134.891	1/1:107:1,106:1:36:106:3804:-333.238,-28.6119,0	1/1:13:0,13:0:0:13:468:-41.8991,-3.91339,0	1/1:276:5,271:5:180:271:9652:-757.93,-66.5322,0	1/1:75:0,75:0:0:75:2680:-223.478,-22.5773,0	0/1:168:62,106:62:2223:106:3763:-251.307,0,-149.76	0/1:92:23,69:23:824:69:2468:-177.053,0,-46.7886	0/1:86:35,51:35:1256:51:1808:-125.379,0,-87.4567	1/1:101:0,101:0:0:101:3604:-288.698,-30.404,0	1/1:135:0,135:0:0:135:4816:-410.477,-40.6391,0	0/1:204:88,116:88:3127:116:4081:-270.6,0,-216.488	0/1:160:54,106:54:1935:106:3690:-246.737,0,-126.261	1/1:247:0,246:0:0:246:8750:-726.625,-74.0534,0	0/1:217:83,134:83:2972:134:4757:-331.434,0,-202.389	0/1:17:7,10:7:252:10:352:-24.7073,0,-17.9114	0/1:186:93,93:93:3332:93:3324:-237.113,0,-243.249	0/1:56:26,30:26:915:30:1072:-74.0605,0,-65.8079	0/1:14:8,6:8:284:6:216:-15.1997,0,-21.6889	1/1:206:1,205:1:36:205:7265:-601.744,-58.4139,0	1/1:86:0,85:0:0:85:3032:-238.873,-25.5876,0	1/1:13:0,13:0:0:13:464:-39.3364,-3.91339,0	1/1:17:0,17:0:0:17:608:-50.4879,-5.11751,0	0/1:133:48,85:48:1728:85:3012:-211.078,0,-115.768	1/1:166:0,166:0:0:166:5912:-490.977,-49.971,0	1/1:8:0,8:0:0:8:288:-23.6187,-2.40824,0	1/1:182:0,182:0:0:182:6446:-534.875,-54.7875,0	0/1:254:94,158:94:3360:158:5574:-383.018,0,-226.398	1/1:115:1,114:1:36:114:4056:-341.653,-31.0202,0	1/1:130:0,130:0:0:130:4604:-364.906,-39.1339,0	1/1:218:0,218:0:0:218:7649:-620.293,-65.6245,0	1/1:202:0,202:0:0:202:7102:-571.592,-60.8081,0	1/1:72:0,72:0:0:72:2572:-225.36,-21.6742,0	1/1:116:0,116:0:0:116:4153:-369.895,-34.9195,0	0/1:115:36,79:36:1288:79:2795:-202.824,0,-81.6051	0/1:32:17,15:17:600:15:536:-36.6265,0,-44.6962	0/1:91:40,51:40:1440:51:1828:-132.416,0,-102.504	1/1:63:0,63:0:0:63:2248:-196.444,-18.9649,0	0/1:440:188,251:188:6708:251:8972:-641.882,0,-470.914	0/1:231:81,150:81:2883:150:5348:-371.686,0,-188.893	0/1:96:45,51:45:1603:51:1824:-131.905,0,-114.297	1/1:120:0,120:0:0:120:4284:-377,-36.1236,0	0/1:4:2,2:2:72:2:72:-4.46909,0,-5.6326	0/1:189:69,120:69:2476:120:4261:-296.497,0,-166.199	0/1:112:47,65:47:1684:65:2317:-172.709,0,-118.132	1/1:488:0,488:0:0:488:17328:-1438.5,-146.903,0	1/1:150:2,148:2:63:148:5235:-421.102,-39.1913,0	1/1:97:0,97:0:0:97:3440:-291.423,-29.1999,0	0/1:121:56,65:56:2008:65:2332:-155.836,0,-144.569	0/1:161:66,95:66:2376:95:3361:-235.938,0,-165.632	1/1:57:0,57:0:0:57:2036:-181.657,-17.1587,0	1/1:116:0,116:0:0:116:4146:-363.467,-34.9195,0	1/1:123:1,122:1:36:122:4376:-384.045,-33.4284,0	0/1:105:51,54:51:1832:54:1936:-138.685,0,-133.553	0/1:192:75,117:75:2696:117:4192:-307.536,0,-185.086	0/1:74:51,23:51:1832:23:815:-48.329,0,-141.433	1/1:167:0,166:0:0:166:5902:-472.904,-49.971,0	1/1:170:0,170:0:0:170:6053:-507.336,-51.1751,0
chr04	33012208	.	TCAAT	TCAAC,CCAAC	407577	PASS	AB=0.543478,0.452374;ABP=117.815,140.763;AC=142,45;AF=0.755319,0.239362;AN=188;AO=11759,3194;CIGAR=4M1X,1X3M1X;DP=15017;DPB=15017;DPRA=0,1.10978;EPP=24659.1,6766.06;EPPR=13.8677;GTI=2;LEN=1,5;MEANALT=2.23404,2.59677;MQM=55.1259,42.479;MQMR=60;NS=94;NUMALT=2;ODDS=3.81738;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=419575,110733;QR=180;RO=5;RPL=5420,1558;RPP=158.971,7.14657;RPPR=3.44459;RPR=6339,1636;RUN=1,1;SAF=5522,1578;SAP=97.4155,3.99202;SAR=6237,1616;SRF=3;SRP=3.44459;SRR=2;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:86:0,86,0:0:0:86,0:3072,0:-275.249,-25.8886,0,-275.249,-25.8886,-275.249	1/1:248:0,248,0:0:0:248,0:8849,0:-793.853,-74.6554,0,-793.853,-74.6554,-793.853	1/1:196:0,196,0:0:0:196,0:7009,0:-627.57,-59.0019,0,-627.57,-59.0019,-627.57	1/1:311:0,309,1:0:0:309,1:11001,33:-987.548,-93.0183,0,-984.881,-90.2869,-984.58	1/2:111:0,61,49:0:0:61,49:2188,1691:-309.14,-131.169,-112.807,-178.073,0,-163.323	1/2:114:0,64,50:0:0:64,50:2273,1697:-314.655,-130.293,-111.027,-184.698,0,-169.646	1/2:214:0,124,90:0:0:124,90:4413,3155:-605.126,-246.165,-208.837,-359.305,0,-332.212	1/1:284:0,283,0:0:0:283,0:10098,0:-904.461,-85.1915,0,-904.461,-85.1915,-904.461	1/1:174:0,173,0:0:0:173,0:6200,0:-555.293,-52.0782,0,-555.293,-52.0782,-555.293	1/1:190:0,189,1:0:0:189,1:6769,36:-607.623,-56.8947,0,-604.843,-53.7721,-604.542	1/2:165:0,86,79:0:0:86,79:3084,2673:-461.343,-210.013,-184.125,-251.672,0,-227.891	1/1:199:0,198,0:0:0:198,0:7059,0:-632.753,-59.6039,0,-632.753,-59.6039,-632.753	1/1:181:0,178,2:0:0:178,2:6326,70:-566.245,-53.5833,0,-560.834,-48.1127,-560.232	1/1:198:0,196,0:0:0:196,0:7005,0:-629.03,-59.0019,0,-629.03,-59.0019,-629.03	1/1:186:0,184,0:0:0:184,0:6573,0:-590.261,-55.3895,0,-590.261,-55.3895,-590.261	1/1:176:0,176,0:0:0:176,0:6253,0:-561.16,-52.9813,0,-561.16,-52.9813,-561.16	1/2:172:0,98,74:0:0:98,74:3483,2587:-484.081,-201.502,-172.001,-282.923,0,-260.646	1/1:142:0,142,0:0:0:142,0:5096,0:-456.976,-42.7463,0,-456.976,-42.7463,-456.976	1/2:136:0,72,64:0:0:72,64:2584,2188:-380.747,-170.78,-149.105,-210.31,0,-191.044	1/2:241:0,138,103:0:0:138,103:4943,3586:-680.785,-278.904,-237.362,-402.225,0,-371.219	1/2:198:0,111,87:0:0:111,87:3976,3035:-561.626,-238.282,-204.868,-323.689,0,-297.5	1/2:59:0,26,33:0:0:26,33:936,1157:-167.572,-91.5244,-83.6976,-76.3985,0,-66.4646	1/1:115:0,111,2:0:0:111,2:3948,62:-354.215,-33.4143,0,-349.297,-28.5028,-348.695	1/1:205:0,200,5:0:0:200,5:7184,177:-643.839,-60.206,0,-630.901,-46.9468,-629.396	1/2:105:0,48,57:0:0:48,57:1716,1996:-295.364,-156.229,-141.779,-139.482,0,-122.324	1/1:346:0,342,1:0:0:342,1:12199,36:-1095.9,-102.952,0,-1093.07,-100.099,-1092.77	1/2:353:0,200,150:0:0:200,150:7158,5191:-986.487,-404.098,-343.892,-582.444,0,-537.289	1/1:102:0,100,0:0:0:100,0:3567,0:-319.859,-30.103,0,-319.859,-30.103,-319.859	1/1:414:0,413,0:0:0:413,0:14748,0:-1324.56,-124.325,0,-1324.56,-124.325,-1324.56	1/2:130:0,69,59:0:0:69,59:2476,2028:-359.972,-158.34,-137.569,-201.662,0,-183.902	1/2:168:0,98,69:0:0:98,69:3520,2385:-472.335,-186.458,-156.957,-285.861,0,-265.09	1/2:8:0,6,2:0:0:6,2:216,70:-23.4327,-5.79068,-3.9845,-17.9843,0,-17.3823	1/2:16:0,12,4:0:0:12,4:428,142:-46.1138,-11.2735,-7.66117,-35.1822,0,-33.9781	1/2:11:0,7,4:0:0:7,4:252,144:-32.2238,-11.7443,-9.63706,-20.8326,0,-19.6284	1/2:18:0,13,5:0:0:13,5:464,180:-51.7686,-14.0392,-10.1258,-38.0723,0,-36.5672	1/1:20:0,20,0:0:0:20,0:716,0:-64.5473,-6.0206,0,-64.5473,-6.0206,-64.5473	1/2:436:0,233,202:0:0:233,202:8283,7060:-1233.03,-558.792,-488.652,-674.294,0,-613.486	1/2:167:0,102,64:0:0:102,64:3632,2247:-469.558,-174.273,-143.568,-295.293,0,-276.028	1/1:165:0,164,0:0:0:164,0:5859,0:-525.974,-49.3689,0,-525.974,-49.3689,-525.974	1/1:4:0,3,0:0:0:3,0:108,0:-9.71721,-0.90309,0,-9.71721,-0.90309,-9.71721	1/1:193:0,192,1:0:0:192,1:6820,36:-611.396,-57.7978,0,-608.686,-54.7526,-608.385	1/1:88:0,87,0:0:0:87,0:3090,0:-277.144,-26.1896,0,-277.144,-26.1896,-277.144	1/2:239:0,127,112:0:0:127,112:4529,3885:-672.123,-303.506,-265.276,-368.961,0,-335.246	1/2:163:0,83,80:0:0:83,80:2950,2801:-459.87,-220.332,-195.347,-239.884,0,-215.802	1/2:120:0,60,59:0:0:60,59:2123,2048:-334.79,-162.545,-144.484,-172.262,0,-154.502	1/1:148:0,147,1:0:0:147,1:5267,36:-473.229,-44.2514,0,-470.32,-40.9856,-470.019	1/1:156:0,155,1:0:0:155,1:5515,35:-494.215,-46.6597,0,-491.368,-43.4634,-491.067	1/2:247:2,127,118:2:72:127,118:4555,4096:-683.924,-314.034,-281.679,-364.602,0,-334.956	1/2:111:0,46,63:0:0:46,63:1648,2179:-303.207,-168.959,-155.112,-134.337,0,-115.372	1/1:174:0,174,0:0:0:174,0:6202,0:-557.102,-52.3792,0,-557.102,-52.3792,-557.102	1/2:203:0,100,102:0:0:100,102:3557,3561:-569.223,-279.684,-249.581,-289.635,0,-258.93	0/2:8:1,1,6:1:36:1,6:36,214:-16.7171,-14.0791,-16.7171,0,-1.73718e-08,-1.13124	1/2:176:0,110,66:0:0:110,66:3945,2314:-494.589,-174.062,-140.949,-320.865,0,-300.997	1/2:47:0,27,20:0:0:27,20:968,706:-133.958,-55.2189,-47.0911,-79.0853,0,-73.0647	1/2:22:0,12,10:0:0:12,10:428,344:-61.6342,-26.8716,-23.2592,-35.1032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chr04	33012234	.	TC	GT,AT	404044	PASS	AB=0.549871,0.44898;ABP=153.321,160.331;AC=143,45;AF=0.760638,0.239362;AN=188;AO=11887,3154;CIGAR=2X,2X;DP=15058;DPB=15061;DPRA=0,0.946079;EPP=218.061,7.41659;EPPR=0;GTI=2;LEN=2,2;MEANALT=1.82979,2.19672;MQM=54.9024,42.3196;MQMR=0;NS=94;NUMALT=2;ODDS=0.506383;PAIRED=0,0;PAIREDR=0;PAO=6,0;PQA=212,0;PQR=0;PRO=0;QA=419873,110033;QR=0;RO=0;RPL=11878,3149;RPP=25737.2,6808.47;RPPR=0;RPR=9,5;RUN=1,1;SAF=5392,1532;SAP=225.256,8.587;SAR=6495,1622;SRF=0;SRP=0;SRR=0;TYPE=mnp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:91:0,91,0:0:0:91,0:3220,0:-287.687,-27.3937,0,-287.687,-27.3937,-287.687	1/1:248:0,248,0:0:0:248,0:8703,0:-780.36,-74.6554,0,-780.36,-74.6554,-780.36	1/1:194:0,194,0:0:0:194,0:6823,0:-611.148,-58.3998,0,-611.148,-58.3998,-611.148	1/1:316:0,315,0:0:0:315,0:11158,0:-1001.42,-94.8245,0,-1001.42,-94.8245,-1001.42	1/2:111:0,63,48:0:0:63,48:2234,1665:-309.628,-128.131,-109.166,-181.837,0,-167.387	1/2:113:0,65,48:0:0:65,48:2297,1614:-309.811,-123.609,-104.042,-186.535,0,-172.085	1/2:213:0,124,89:0:0:124,89:4368,3071:-594.79,-239.849,-202.521,-355.282,0,-328.49	1/1:285:0,285,0:0:0:285,0:10047,0:-899.344,-85.7936,0,-899.344,-85.7936,-899.344	1/1:177:0,177,0:0:0:177,0:6259,0:-560.762,-53.2823,0,-560.762,-53.2823,-560.762	1/1:195:0,195,0:0:0:195,0:6882,0:-617.833,-58.7009,0,-617.833,-58.7009,-617.833	1/2:161:0,83,77:0:0:83,77:2907,2680:-446.107,-209.801,-184.816,-236.289,0,-213.11	1/1:197:0,197,0:0:0:197,0:6929,0:-620.687,-59.3029,0,-620.687,-59.3029,-620.687	1/1:182:0,182,0:0:0:182,0:6387,0:-571.729,-54.7875,0,-571.729,-54.7875,-571.729	1/1:197:0,197,0:0:0:197,0:6958,0:-624.912,-59.3029,0,-624.912,-59.3029,-624.912	1/1:185:0,185,0:0:0:185,0:6527,0:-585.668,-55.6906,0,-585.668,-55.6906,-585.668	1/1:174:0,174,0:0:0:174,0:6128,0:-550.126,-52.3792,0,-550.126,-52.3792,-550.126	1/2:167:0,94,73:0:0:94,73:3326,2560:-468.33,-198.647,-170.35,-270.026,0,-248.051	1/1:141:0,140,0:0:0:140,0:4993,0:-447.781,-42.1442,0,-447.781,-42.1442,-447.781	1/2:134:0,71,63:0:0:71,63:2500,2240:-377.408,-174.677,-153.304,-203.076,0,-184.111	1/2:243:0,140,103:0:0:140,103:4981,3605:-684.768,-280.154,-238.009,-404.958,0,-373.952	1/2:198:0,111,86:0:0:111,86:3928,2976:-552.634,-233.573,-200.158,-319.047,0,-293.158	1/2:58:0,25,33:0:0:25,33:883,1134:-161.113,-89.5238,-81.9981,-71.933,0,-61.999	1/1:115:0,114,1:0:0:114,1:3969,36:-355.819,-34.3174,0,-352.909,-31.0516,-352.608	1/1:207:0,202,5:0:0:202,5:7103,178:-636.558,-60.8081,0,-623.703,-47.6335,-622.198	1/2:106:0,50,56:0:0:50,56:1749,1919:-290.36,-148.882,-133.83,-141.817,0,-124.959	1/1:361:0,361,0:0:0:361,0:12658,0:-1136.96,-108.672,0,-1136.96,-108.672,-1136.96	1/2:350:0,199,151:0:0:199,151:7067,5292:-985.305,-411.183,-351.278,-574.465,0,-529.01	1/1:104:0,103,1:0:0:103,1:3628,36:-325.501,-31.0061,0,-322.586,-27.7337,-322.285	1/1:418:0,418,0:0:0:418,0:14923,0:-1340.42,-125.831,0,-1340.42,-125.831,-1340.42	1/2:126:0,69,57:0:0:69,57:2412,1969:-349.101,-153.483,-132.712,-195.599,0,-178.44	1/2:168:0,99,68:0:0:99,68:3456,2389:-466.089,-185.553,-155.751,-280.558,0,-260.088	1/2:8:0,6,2:0:0:6,2:208,68:-22.5922,-5.67428,-3.8681,-17.2523,0,-16.6503	1/2:16:0,12,4:0:0:12,4:430,142:-46.2371,-11.2108,-7.5984,-35.3674,0,-34.1633	1/2:11:0,8,3:0:0:8,3:288,106:-32.0346,-8.62756,-6.21932,-23.7524,0,-22.8493	1/2:18:0,13,5:0:0:13,5:466,180:-51.9475,-14.0392,-10.1258,-38.2517,0,-36.7465	1/1:20:0,20,0:0:0:20,0:716,0:-64.5434,-6.0206,0,-64.5434,-6.0206,-64.5434	1/2:439:0,237,201:0:0:237,201:8331,7088:-1237.96,-560.649,-489.305,-677.3,0,-616.793	1/2:169:0,105,63:0:0:105,63:3702,2234:-472.84,-172.674,-141.066,-300.189,0,-281.224	1/1:168:0,168,0:0:0:168,0:5935,0:-531.521,-50.573,0,-531.521,-50.573,-531.521	1/1:4:0,4,0:0:0:4,0:144,0:-13.2906,-1.20412,0,-13.2906,-1.20412,-13.2906	1/1:191:0,190,1:0:0:190,1:6757,36:-605.596,-57.1957,0,-602.886,-54.4779,-602.585	1/1:91:0,91,0:0:0:91,0:3201,0:-286.94,-27.3937,0,-286.94,-27.3937,-286.94	1/2:240:0,129,111:0:0:129,111:4558,3877:-673.146,-302.75,-263.917,-370.74,0,-337.326	1/2:163:0,84,79:0:0:84,79:2978,2780:-460.521,-218.777,-193.491,-242.09,0,-218.309	1/2:124:0,64,58:0:0:64,58:2266,2024:-343.981,-160.257,-140.991,-183.711,0,-166.251	1/1:148:0,147,1:0:0:147,1:5244,36:-471.151,-44.2514,0,-468.242,-40.9856,-467.941	1/1:158:0,157,1:0:0:157,1:5515,36:-493.988,-47.2617,0,-491.052,-43.9662,-490.751	1/2:251:0,132,119:0:0:132,119:4690,4200:-708.59,-327.352,-287.616,-381.225,0,-345.403	1/2:112:0,47,65:0:0:47,65:1673,2251:-309.533,-173.338,-159.189,-136.54,0,-116.973	1/1:175:0,174,1:0:0:174,1:6163,36:-553.122,-52.3792,0,-550.191,-49.0888,-549.89	1/2:204:0,102,102:0:0:102,102:3597,3540:-569.455,-277.092,-246.387,-292.707,0,-262.002	1/2:8:0,2,6:0:0:2,6:72,214:-23.254,-17.3764,-16.7743,-6.23466,0,-4.42848	1/2:173:0,108,65:0:0:108,65:3846,2269:-482.024,-169.743,-137.231,-312.616,0,-293.049	1/2:49:0,29,20:0:0:29,20:1044,699:-139.479,-54.6443,-45.9144,-85.1793,0,-79.1587	1/2:22:0,12,10:0:0:12,10:427,341:-60.9321,-26.2488,-22.6364,-35.0198,0,-32.0095	1/1:172:0,172,0:0:0:172,0:6048,0:-541.991,-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chr04	33047756	.	ATCGCCT	ATCGCTCT,ACTCT	475270	PASS	AB=0.623934,0.370121;ABP=1035.35,1136.76;AC=142,46;AF=0.755319,0.244681;AN=188;AO=15516,2887;CIGAR=5M1I2M,1M1I1M3D2M;DP=18514;DPB=19920;DPRA=0,0.943936;EPP=33695.6,6272.05;EPPR=0;GTI=5;LEN=1,5;MEANALT=2.62766,2.91071;MQM=59.9895,59.9782;MQMR=0;NS=94;NUMALT=2;ODDS=0.2624;PAIRED=0,0;PAIREDR=0;PAO=1.5,0;PQA=46.5,0;PQR=46.5;PRO=1.5;QA=539220,102329;QR=0;RO=0;RPL=6003,0;RPP=1727.21,6272.05;RPPR=0;RPR=9513,2887;RUN=1,1;SAF=6003,0;SAP=1727.21,6272.05;SAR=9513,2887;SRF=0;SRP=0;SRR=0;TYPE=ins,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:119:0,116,0:0:0:116,0:4056,0:-364.853,-34.9195,0,-364.853,-34.9195,-364.853	1/1:81:0,81,0:0:0:81,0:2813,0:-253.408,-24.3834,0,-253.408,-24.3834,-253.408	1/1:309:0,307,1:0:0:307,1:10710,36:-963.472,-92.4162,0,-960.534,-89.4788,-960.233	1/1:583:0,579,2:0:0:579,2:20049,72:-1803.56,-174.296,0,-1797.69,-168.422,-1797.09	1/2:95:0,60,35:0:0:60,35:2089,1217:-269.161,-99.2933,-81.2315,-170.215,0,-159.679	1/2:70:0,31,38:0:0:31,38:1095,1315:-196.133,-106.954,-97.6224,-89.274,0,-77.8348	1/2:243:0,171,70:0:0:171,70:5974,2497:-689.497,-203.551,-152.075,-485.941,0,-464.869	1/1:192:0,192,0:0:0:192,0:6713,0:-604.258,-57.7978,0,-604.258,-57.7978,-604.258	1/1:136:0,136,0:0:0:136,0:4796,0:-431.802,-40.9401,0,-431.802,-40.9401,-431.802	1/1:251:0,247,0:0:0:247,0:8508,0:-765.411,-74.3544,0,-765.411,-74.3544,-765.411	1/2:89:0,51,38:0:0:51,38:1718,1348:-249.38,-110.181,-94.8287,-139.546,0,-128.107	1/1:152:0,151,0:0:0:151,0:5254,0:-472.649,-45.4555,0,-472.649,-45.4555,-472.649	1/1:173:0,171,0:0:0:171,0:6014,0:-540.983,-51.4761,0,-540.983,-51.4761,-540.983	1/1:180:0,179,0:0:0:179,0:6152,0:-553.517,-53.8844,0,-553.517,-53.8844,-553.517	1/1:162:0,162,0:0:0:162,0:5597,0:-503.865,-48.7669,0,-503.865,-48.7669,-503.865	1/1:165:0,164,0:0:0:164,0:5695,0:-512.322,-49.3689,0,-512.322,-49.3689,-512.322	1/2:58:0,33,25:0:0:33,25:1154,896:-167.312,-73.4348,-63.5008,-94.2316,0,-86.7059	1/1:38:0,38,0:0:0:38,0:1341,0:-120.988,-11.4391,0,-120.988,-11.4391,-120.988	1/2:102:0,54,47:0:0:54,47:1884,1667:-289.037,-135.808,-119.553,-153.221,0,-139.073	1/2:270:0,177,92:0:0:177,92:6193,3302:-773.183,-269.344,-216.062,-503.835,0,-476.14	1/2:264:0,180,84:0:0:180,84:6213,2997:-749.415,-244.672,-190.486,-505.096,0,-479.81	1/2:127:0,81,43:0:0:81,43:2823,1532:-354.437,-124.875,-100.492,-229.562,0,-216.618	1/1:282:0,281,1:0:0:281,1:9651,36:-868.124,-84.5894,0,-865.186,-81.2922,-864.885	1/1:239:0,229,8:0:0:229,8:7924,286:-712.851,-68.9359,0,-689.531,-45.618,-687.123	1/2:174:0,110,62:0:0:110,62:3817,2195:-489.059,-178.794,-145.681,-310.261,0,-291.597	1/1:675:0,670,0:0:0:670,0:23108,0:-2078.88,-201.69,0,-2078.88,-201.69,-2078.88	1/2:640:0,382,251:0:0:382,251:13395,8905:-1815.58,-725.554,-610.56,-1090.05,0,-1014.49	1/1:116:0,114,1:0:0:114,1:3935,34:-354.055,-34.3174,0,-351.297,-31.5095,-350.996	1/1:483:0,482,0:0:0:482,0:16731,0:-1505.14,-145.096,0,-1505.14,-145.096,-1505.14	1/2:177:0,117,58:0:0:117,58:4058,2024:-494.528,-164.681,-129.461,-329.908,0,-312.448	1/2:162:0,89,73:0:0:89,73:3116,2583:-464.268,-210.742,-183.951,-253.878,0,-231.903	1/2:16:0,12,4:0:0:12,4:423,142:-46.3636,-11.9251,-8.31273,-34.7927,0,-33.5886	1/2:30:0,22,8:0:0:22,8:784,288:-87.7616,-23.8592,-17.2365,-64.2613,0,-61.853	1/2:15:0,7,8:0:0:7,8:237,288:-43.0626,-23.8592,-21.752,-19.5518,0,-17.1436	1/2:16:0,4,12:0:0:4,12:144,421:-46.3631,-34.6111,-33.407,-12.1095,0,-8.49714	1/1:43:0,43,0:0:0:43,0:1508,0:-136.01,-12.9443,0,-136.01,-12.9443,-136.01	1/2:377:0,241,134:0:0:241,134:8362,4733:-1065.16,-385.442,-312.894,-679.72,0,-639.382	1/2:248:0,177,68:0:0:177,68:6053,2399:-686.625,-195.364,-142.082,-491.28,0,-470.81	1/1:77:0,75,0:0:0:75,0:2603,0:-234.184,-22.5773,0,-234.184,-22.5773,-234.184	1/2:8:0,7,1:0:0:7,1:233,36:-22.1279,-3.29724,-1.19003,-19.1871,0,-18.8861	1/1:319:0,313,3:0:0:313,3:10880,108:-978.809,-94.2224,0,-969.997,-85.3735,-969.094	1/1:93:0,92,0:0:0:92,0:3171,0:-285.269,-27.6948,0,-285.269,-27.6948,-285.269	1/2:245:0,176,69:0:0:176,69:6186,2445:-703.043,-199.532,-146.551,-503.865,0,-483.094	1/2:134:0,86,48:0:0:86,48:2998,1685:-381.299,-137.484,-111.595,-244.165,0,-229.716	1/2:197:0,112,84:0:0:112,84:3852,2996:-557.041,-244.224,-210.509,-312.808,0,-287.522	1/1:206:0,205,0:0:0:205,0:7113,0:-639.885,-61.7112,0,-639.885,-61.7112,-639.885	1/1:153:0,152,0:0:0:152,0:5265,0:-473.67,-45.7566,0,-473.67,-45.7566,-473.67	1/2:469:0,336,132:0:0:336,132:11789,4673:-1340.04,-380.637,-279.491,-959.392,0,-919.656	1/2:283:0,200,83:0:0:200,83:6965,2954:-807.479,-241.107,-180.901,-566.726,0,-541.74	1/1:329:0,329,0:0:0:329,0:11509,0:-1035.72,-99.0389,0,-1035.72,-99.0389,-1035.72	1/2:195:0,148,42:0:0:148,42:5117,1446:-533.229,-117.446,-72.8939,-415.789,0,-403.145	1/2:28:0,18,10:0:0:18,10:636,358:-81.3459,-29.5526,-24.134,-52.1495,0,-49.1392	1/2:153:0,59,93:0:0:59,93:2080,3329:-440.768,-271.412,-253.651,-169.291,0,-141.296	1/2:159:0,82,75:0:0:82,75:2872,2694:-453.476,-219.801,-195.117,-233.704,0,-211.126	1/2:13:0,9,4:0:0:9,4:320,144:-38.1841,-12.1095,-9.40023,-26.4331,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chr04	33073862	.	G	A	49430.6	PASS	AB=0.395784;ABP=437.06;AC=143;AF=0.760638;AN=188;AO=5024;CIGAR=1X;DP=7823;DPB=7823;DPRA=0;EPP=10912.5;EPPR=6074.45;GTI=6;LEN=1;MEANALT=1.03191;MQM=24.8041;MQMR=24.9696;NS=94;NUMALT=1;ODDS=0.291394;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180172;QR=99904;RO=2796;RPL=0;RPP=10912.5;RPPR=6074.45;RPR=5024;RUN=1;SAF=5024;SAP=10912.5;SAR=0;SRF=2796;SRP=6074.45;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:35:0,35:0:0:35:1252:-77.8717,-10.5361,0	1/1:66:0,66:0:0:66:2342:-145.9,-19.868,0	1/1:64:0,64:0:0:64:2296:-142.788,-19.2659,0	1/1:85:0,85:0:0:85:3029:-180.745,-25.5876,0	0/1:92:50,42:50:1800:42:1508:-65.5932,0,-79.2472	0/1:73:41,32:41:1464:32:1152:-47.9927,0,-70.6679	0/1:110:60,49:60:2156:49:1764:-73.4101,0,-102.44	1/1:86:1,85:1:36:85:3037:-187.617,-23.3299,0	1/1:86:0,86:0:0:86:3096:-190.494,-25.8886,0	1/1:53:0,53:0:0:53:1888:-110.84,-15.9546,0	0/1:69:45,24:45:1607:24:864:-30.0331,0,-79.4963	1/1:62:0,62:0:0:62:2228:-138.852,-18.6639,0	1/1:35:0,35:0:0:35:1260:-78.5676,-10.5361,0	1/1:52:0,52:0:0:52:1864:-115.182,-15.6536,0	1/1:43:0,43:0:0:43:1544:-93.0886,-12.9443,0	1/1:32:0,32:0:0:32:1148:-72.069,-9.63296,0	0/1:58:31,27:31:1103:27:972:-42.8157,0,-53.0834	1/1:31:1,30:1:36:30:1080:-63.7478,-5.74545,0	0/1:34:16,18:16:572:18:644:-29.2576,0,-26.122	0/1:167:105,62:105:3772:62:2228:-83.3906,0,-187.15	0/1:150:95,55:95:3401:55:1968:-75.2083,0,-152.316	0/1:67:53,14:53:1862:14:500:-12.2759,0,-105.569	1/1:81:0,81:0:0:81:2904:-173.068,-24.3834,0	1/1:118:11,107:11:396:107:3840:-209.414,-9.10469,0	0/1:61:33,28:33:1188:28:993:-44.239,0,-52.3155	1/1:290:0,290:0:0:290:10409:-666.916,-87.2987,0	0/1:156:96,60:96:3429:60:2152:-84.9633,0,-154.778	1/1:21:0,21:0:0:21:756:-46.8712,-6.32163,0	1/1:167:0,167:0:0:167:5970:-377.847,-50.272,0	0/1:138:87,51:87:3079:51:1836:-69.2876,0,-141.871	0/1:146:89,57:89:3177:57:2040:-79.2805,0,-155.791	0/1:55:37,18:37:1328:18:644:-24.6194,0,-57.1229	0/1:68:36,32:36:1296:32:1133:-50.3204,0,-52.853	0/1:28:16,12:16:576:12:432:-18.4604,0,-25.8145	0/1:101:72,29:72:2531:29:1044:-34.2289,0,-118.729	1/1:31:0,31:0:0:31:1116:-66.9657,-9.33193,0	0/1:142:73,68:73:2620:68:2444:-110.547,0,-135.968	0/1:244:165,79:165:5905:79:2825:-101.028,0,-273.524	1/1:55:0,55:0:0:55:1976:-121.474,-16.5567,0	1/1:19:0,19:0:0:19:669:-42.992,-5.71957,0	1/1:82:2,80:2:72:80:2865:-171.57,-20.1748,0	1/1:23:0,23:0:0:23:828:-52.2125,-6.92369,0	0/1:162:81,81:81:2867:81:2904:-129.281,0,-121.396	0/1:22:12,10:12:432:10:360:-14.9765,0,-20.9261	0/1:60:32,28:32:1129:28:1004:-41.9549,0,-55.0955	1/1:74:0,74:0:0:74:2641:-168.419,-22.2762,0	1/1:73:0,73:0:0:73:2628:-161.325,-21.9752,0	0/1:195:110,85:110:3921:85:3048:-121.527,0,-191.924	0/1:116:74,42:74:2652:42:1512:-55.2044,0,-133.467	1/1:61:0,61:0:0:61:2188:-131.269,-18.3628,0	0/1:185:108,77:108:3853:77:2764:-118.19,0,-206.026	0/1:52:41,11:41:1464:11:392:-8.04794,0,-74.6373	0/1:134:65,69:65:2332:69:2484:-112.671,0,-107.096	0/1:36:22,14:22:788:14:504:-21.6585,0,-42.3095	0/1:35:29,6:29:1040:6:216:-3.03193,0,-47.4618	1/1:81:0,81:0:0:81:2916:-177.635,-24.3834,0	1/1:49:0,49:0:0:49:1764:-104.727,-14.7505,0	1/1:10:0,10:0:0:10:360:-23.6683,-3.0103,0	1/1:36:0,36:0:0:36:1273:-82.1173,-10.8371,0	0/1:98:53,45:53:1889:45:1620:-70.6554,0,-81.3059	1/1:74:1,73:1:36:73:2628:-154.009,-18.6975,0	1/1:14:0,14:0:0:14:504:-30.2259,-4.21442,0	1/1:105:0,105:0:0:105:3761:-237.364,-31.6082,0	0/1:189:122,67:122:4349:67:2389:-88.0462,0,-218.888	1/1:47:1,46:1:36:46:1644:-100.626,-11.7749,0	1/1:35:0,35:0:0:35:1256:-74.8824,-10.5361,0	1/1:85:0,85:0:0:85:3056:-181.816,-25.5876,0	1/1:119:1,117:1:36:117:4204:-250.743,-34.64,0	1/1:20:0,20:0:0:20:716:-43.3212,-6.0206,0	1/1:70:0,70:0:0:70:2516:-154.466,-21.0721,0	0/1:70:39,31:39:1391:31:1116:-49.5347,0,-74.3243	0/1:41:22,19:22:788:19:684:-29.8194,0,-38.5255	0/1:155:89,66:89:3200:66:2368:-100.112,0,-150.011	1/1:51:0,51:0:0:51:1828:-113.395,-15.3525,0	0/1:230:120,110:120:4277:110:3941:-177.531,0,-180.68	0/1:117:77,40:77:2760:40:1440:-49.9403,0,-142.189	0/1:137:97,40:97:3469:40:1440:-47.2227,0,-171.812	1/1:36:0,36:0:0:36:1292:-79.4838,-10.8371,0	0/1:44:29,15:29:1044:15:536:-19.563,0,-51.2981	0/1:83:58,25:58:2069:25:900:-29.9031,0,-98.0033	0/1:85:53,32:53:1900:32:1129:-43.9078,0,-95.1476	1/1:203:0,203:0:0:203:7296:-435.907,-61.1091,0	1/1:78:0,78:0:0:78:2804:-166.182,-23.4803,0	1/1:24:0,24:0:0:24:860:-51.7238,-7.22472,0	0/1:51:30,21:30:1080:21:756:-29.5723,0,-53.2175	0/1:108:65,43:65:2321:43:1548:-59.41,0,-115.417	1/1:27:0,27:0:0:27:972:-60.2755,-8.12781,0	1/1:66:0,66:0:0:66:2372:-143.943,-19.868,0	1/1:53:0,53:0:0:53:1908:-114.49,-15.9546,0	0/1:45:24,21:24:864:21:752:-32.1503,0,-38.1267	0/1:139:89,50:89:3196:50:1796:-68.049,0,-148.722	0/1:53:37,16:37:1315:16:576:-18.4616,0,-68.2553	1/1:57:0,57:0:0:57:2037:-121.58,-17.1587,0	1/1:57:0,57:0:0:57:2029:-121.177,-17.1587,0
chr04	33073868	.	CAAAATAG	CAAATAG	14322.9	PASS	AB=0.590095;ABP=321.902;AC=45;AF=0.239362;AN=188;AO=2680;CIGAR=1M1D6M;DP=7811;DPB=7476;DPRA=1.51164;EPP=5822.56;EPPR=11105.7;GTI=4;LEN=1;MEANALT=1.16327;MQM=25.2787;MQMR=24.9181;NS=94;NUMALT=1;ODDS=0.150101;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=67589;QR=181610;RO=5113;RPL=0;RPP=5822.56;RPPR=11105.7;RPR=2680;RUN=1;SAF=2680;SAP=5822.56;SAR=0;SRF=5113;SRP=11105.7;SRR=0;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/0:36:36,0:36:1265:0:0:0,-10.8371,-79.8367	0/0:67:67,0:67:2380:0:0:0,-20.169,-149.49	0/0:64:63,0:63:2234:0:0:0,-18.9649,-138.982	0/0:91:91,0:91:3199:0:0:0,-27.3937,-195.42	0/1:94:44,50:44:1563:50:1199:-66.3167,0,-69.9648	0/1:74:32,42:32:1141:42:1085:-64.2451,0,-47.6015	0/1:108:48,59:48:1708:59:1496:-86.7127,0,-70.7859	0/0:85:84,1:84:2984:1:26:0,-23.288,-184.911	0/0:90:90,0:90:3179:0:0:0,-27.0927,-199.784	0/0:55:55,0:55:1942:0:0:0,-16.5566,-115.923	0/1:67:25,42:25:899:42:1073:-65.3529,0,-33.0185	0/0:63:62,0:62:2207:0:0:0,-18.6639,-138.104	0/0:40:40,0:40:1427:0:0:0,-12.0412,-90.585	0/0:51:51,0:51:1821:0:0:0,-15.3525,-112.032	0/0:43:42,0:42:1509:0:0:0,-12.6433,-90.0129	0/0:33:33,0:33:1182:0:0:0,-9.93399,-74.4385	0/1:58:28,30:28:996:30:778:-44.6768,0,-45.8016	0/0:33:32,0:32:1149:0:0:0,-9.63296,-73.1882	0/1:35:18,17:18:642:17:442:-24.8765,0,-28.802	0/1:167:64,102:64:2282:102:2621:-158.226,0,-88.309	0/1:150:55,95:55:1936:95:2277:-134.435,0,-74.6697	0/1:63:14,49:14:491:49:1334:-88.6809,0,-13.3469	0/0:83:83,0:83:2957:0:0:0,-24.9855,-178.959	0/0:119:112,7:112:3985:7:168:0,-22.3836,-236.942	0/1:59:30,29:30:1060:29:688:-36.5346,0,-50.4871	0/0:294:294,0:294:10439:0:0:0,-88.5028,-677.2	0/1:153:60,93:60:2130:93:2206:-127.765,0,-85.7105	0/0:21:21,0:21:750:0:0:0,-6.32163,-46.8196	0/0:172:172,0:172:6109:0:0:0,-51.7772,-390.787	0/1:141:54,87:54:1915:87:2078:-121.284,0,-76.1705	0/1:144:58,86:58:2056:86:2208:-132.346,0,-83.0372	0/1:54:19,35:19:670:35:794:-45.96,0,-27.3414	0/1:67:32,35:32:1121:35:802:-42.766,0,-50.7878	0/1:25:13,12:13:462:12:311:-17.4483,0,-21.5392	0/1:82:29,53:29:1036:53:1369:-84.4223,0,-39.8805	0/0:31:31,0:31:1107:0:0:0,-9.33193,-66.9423	0/1:143:70,73:70:2484:73:2021:-119.537,0,-114.606	0/1:236:79,157:79:2804:157:3759:-225.067,0,-103.532	0/0:55:54,0:54:1936:0:0:0,-16.2556,-119.226	0/0:19:19,0:19:668:0:0:0,-5.71957,-42.4181	0/0:85:83,2:83:2944:2:48:0,-21.5979,-179.747	0/0:24:24,0:24:860:0:0:0,-7.22472,-54.3185	0/1:158:80,78:80:2820:78:1866:-99.8545,0,-128.004	0/1:22:10,12:10:351:12:308:-18.0795,0,-14.9066	0/1:60:28,32:28:992:32:830:-48.2139,0,-41.86	0/0:80:80,0:80:2836:0:0:0,-24.0824,-184.017	0/0:74:74,0:74:2642:0:0:0,-22.2762,-163.601	0/1:194:86,108:86:3066:108:2785:-163.438,0,-124.743	0/1:118:44,74:44:1571:74:1902:-116.083,0,-60.3583	0/0:63:63,0:63:2226:0:0:0,-18.9649,-137.003	0/1:189:78,110:78:2757:110:2996:-184.297,0,-119.798	0/1:51:11,40:11:391:40:1001:-64.1476,0,-8.34297	0/1:135:70,65:70:2483:65:1681:-93.3027,0,-114.234	0/1:35:14,21:14:504:21:584:-36.5895,0,-21.9595	0/1:22:6,16:6:216:16:416:-26.7203,0,-6.94532	0/0:82:82,0:82:2882:0:0:0,-24.6845,-179.106	0/0:50:50,0:50:1780:0:0:0,-15.0515,-107.517	0/0:12:12,0:12:429:0:0:0,-3.61236,-29.1052	0/0:36:36,0:36:1280:0:0:0,-10.8371,-82.5582	0/1:96:45,51:45:1599:51:1221:-67.5356,0,-71.0703	0/0:75:75,0:75:2678:0:0:0,-22.5772,-162.951	0/0:14:14,0:14:497:0:0:0,-4.21442,-30.1821	0/0:106:106,0:106:3773:0:0:0,-31.9092,-240.036	0/1:188:66,121:66:2337:121:3093:-189.412,0,-85.4563	0/0:47:45,1:45:1596:1:24:0,-12.0219,-97.6912	0/0:35:35,0:35:1222:0:0:0,-10.536,-74.639	0/0:87:87,0:87:3106:0:0:0,-26.1896,-186.381	0/0:119:117,0:117:4176:0:0:0,-35.2205,-250.444	0/0:21:21,0:21:746:0:0:0,-6.32163,-45.6996	0/0:70:70,0:70:2479:0:0:0,-21.0721,-153.764	0/1:71:32,39:32:1143:39:1095:-67.1262,0,-52.1617	0/1:44:21,23:21:740:23:598:-34.5846,0,-33.4723	0/1:149:67,82:67:2365:82:2123:-124.434,0,-103.746	0/0:52:52,0:52:1852:0:0:0,-15.6536,-115.773	0/1:224:109,113:109:3871:113:2691:-144.886,0,-175.801	0/1:117:40,77:40:1423:77:2000:-124.38,0,-49.825	0/1:125:41,84:41:1458:84:2171:-135.276,0,-53.2627	0/0:38:38,0:38:1362:0:0:0,-11.4391,-84.3806	0/1:41:15,26:15:530:26:671:-41.2452,0,-20.4286	0/1:82:25,57:25:885:57:1361:-82.8233,0,-30.1069	0/1:86:35,51:35:1229:51:1317:-79.3544,0,-51.6342	0/0:205:202,0:202:7186:0:0:0,-60.8081,-432.196	0/0:82:82,0:82:2922:0:0:0,-24.6845,-176.142	0/0:24:24,0:24:854:0:0:0,-7.22472,-51.695	0/1:49:21,28:21:753:28:720:-42.7059,0,-30.1586	0/1:108:43,65:43:1535:65:1673:-100.711,0,-59.3266	0/0:27:27,0:27:968:0:0:0,-8.12781,-60.2404	0/0:67:67,0:67:2369:0:0:0,-20.169,-146.079	0/0:53:53,0:53:1886:0:0:0,-15.9546,-114.336	0/1:45:21,23:21:751:23:554:-30.272,0,-31.2929	0/1:140:50,90:50:1782:90:2163:-128.65,0,-67.6338	0/1:54:17,37:17:601:37:962:-60.5482,0,-19.5497	0/0:57:57,0:57:2024:0:0:0,-17.1587,-121.759	0/0:58:58,0:58:2057:0:0:0,-17.4597,-123.81
chr04	33073889	.	A	C	21573.9	PASS	AB=0.603027;ABP=429.421;AC=45;AF=0.239362;AN=188;AO=2802;CIGAR=1X;DP=7873;DPB=7873;DPRA=1.57074;EPP=5966.48;EPPR=10334.7;GTI=6;LEN=1;MEANALT=1;MQM=24.9243;MQMR=24.9564;NS=94;NUMALT=1;ODDS=0.513734;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99818;QR=181112;RO=5069;RPL=2788;RPP=5966.48;RPPR=10334.7;RPR=14;RUN=1;SAF=2802;SAP=6087.48;SAR=0;SRF=5069;SRP=11010.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:35:35,0:35:1244:0:0:0,-10.536,-77.7892	0/0:65:65,0:65:2319:0:0:0,-19.5669,-144.944	0/0:64:64,0:64:2284:0:0:0,-19.2659,-142.716	0/0:91:91,0:91:3244:0:0:0,-27.3937,-195.935	0/1:93:43,50:43:1527:50:1777:-78.3416,0,-67.4948	0/1:75:32,43:32:1139:43:1516:-73.9771,0,-47.1879	0/1:110:48,62:48:1720:62:2211:-105.675,0,-71.0573	0/0:85:84,1:84:3000:1:36:0,-23.0288,-185.693	0/0:90:90,0:90:3212:0:0:0,-27.0927,-200.028	0/0:54:54,0:54:1932:0:0:0,-16.2556,-113.986	0/1:68:25,43:25:896:43:1529:-75.2413,0,-32.6854	0/0:63:63,0:63:2243:0:0:0,-18.9649,-141.119	0/0:38:38,0:38:1356:0:0:0,-11.4391,-85.7894	0/0:52:52,0:52:1847:0:0:0,-15.6536,-114.939	0/0:44:44,0:44:1580:0:0:0,-13.2453,-95.4729	0/0:33:32,0:32:1152:0:0:0,-9.63296,-71.3069	0/1:58:27,31:27:960:31:1097:-52.7537,0,-43.6188	0/0:33:33,0:33:1184:0:0:0,-9.93399,-75.4509	0/1:36:18,18:18:635:18:631:-29.8835,0,-28.4936	0/1:171:64,107:64:2288:107:3816:-188.958,0,-88.172	0/1:151:54,97:54:1924:97:3484:-156.941,0,-72.9098	0/1:66:14,52:14:495:52:1851:-104.089,0,-12.4352	0/0:81:81,0:81:2896:0:0:0,-24.3834,-174.762	0/0:119:111,8:111:3976:8:288:0,-19.1153,-231.773	0/1:60:30,30:30:1072:30:1064:-45.9064,0,-50.2756	0/0:290:290,0:290:10412:0:0:0,-87.2987,-669.462	0/1:155:60,95:60:2143:95:3392:-153.213,0,-85.0632	0/0:21:21,0:21:744:0:0:0,-6.32163,-46.7472	0/0:171:171,0:171:6103:0:0:0,-51.4761,-388.693	0/1:142:53,89:53:1896:89:3178:-145.926,0,-74.0653	0/1:145:58,87:58:2076:87:3110:-151.869,0,-82.6756	0/1:57:19,38:19:684:38:1347:-58.4749,0,-27.1963	0/1:68:32,36:32:1144:36:1288:-52.7859,0,-50.741	0/1:30:13,17:13:464:17:608:-27.4659,0,-20.0371	0/1:102:28,74:28:1000:74:2643:-122.87,0,-31.6251	0/0:31:31,0:31:1103:0:0:0,-9.33193,-66.7706	0/1:144:70,74:70:2496:74:2643:-136.478,0,-114.381	0/1:240:77,163:77:2760:163:5810:-271.274,0,-98.1698	0/0:54:54,0:54:1932:0:0:0,-16.2556,-119.171	0/0:18:18,0:18:648:0:0:0,-5.41854,-41.2351	0/0:83:81,2:81:2904:2:72:0,-20.4758,-175.042	0/0:22:22,0:22:784:0:0:0,-6.62266,-49.9006	0/1:161:81,80:81:2900:80:2855:-119.572,0,-129.55	0/1:22:10,12:10:360:12:432:-20.9261,0,-14.9765	0/1:60:28,32:28:1000:32:1148:-55.6672,0,-41.9213	0/0:77:77,0:77:2756:0:0:0,-23.1793,-176.859	0/0:73:73,0:73:2611:0:0:0,-21.9752,-161.324	0/1:196:85,111:85:3052:111:3950:-194.013,0,-122.234	0/1:120:44,76:44:1580:76:2706:-136.486,0,-59.8138	0/0:61:61,0:61:2172:0:0:0,-18.3628,-132.917	0/1:187:79,108:79:2812:108:3855:-205.945,0,-122.423	0/1:53:11,42:11:396:42:1482:-75.9415,0,-7.78071	0/1:133:68,65:68:2395:65:2313:-107.079,0,-109.936	0/1:34:13,21:13:464:21:741:-40.2512,0,-19.9071	0/1:35:6,29:6:216:29:1040:-47.4618,0,-3.03193	0/0:78:78,0:78:2804:0:0:0,-23.4803,-171.363	0/0:50:50,0:50:1796:0:0:0,-15.0515,-107.616	0/0:12:12,0:12:415:0:0:0,-3.61236,-28.659	0/0:36:36,0:36:1292:0:0:0,-10.8371,-82.6796	0/1:96:45,51:45:1616:51:1813:-78.8977,0,-71.2163	0/0:74:74,0:74:2660:0:0:0,-22.2762,-161.025	0/0:14:14,0:14:500:0:0:0,-4.21442,-30.1922	0/0:106:106,0:106:3800:0:0:0,-31.9092,-240.273	0/1:191:67,124:67:2384:124:4372:-221.803,0,-87.9127	0/0:46:45,1:45:1604:1:36:0,-11.4738,-98.3644	0/0:35:35,0:35:1248:0:0:0,-10.536,-74.8076	0/0:88:87,1:87:3112:1:36:0,-23.9319,-183.998	0/0:115:115,0:115:4116:0:0:0,-34.6184,-248.311	0/0:21:21,0:21:748:0:0:0,-6.32163,-45.6248	0/0:70:70,0:70:2478:0:0:0,-21.0721,-153.938	0/1:72:31,41:31:1112:41:1463:-78.6799,0,-49.5935	0/1:44:21,23:21:748:23:805:-39.3528,0,-33.5907	0/1:156:66,90:66:2352:90:3215:-151.753,0,-99.6558	0/0:52:52,0:52:1863:0:0:0,-15.6536,-115.779	0/1:230:111,119:111:3972:119:4239:-180.583,0,-180.919	0/1:116:39,77:39:1388:77:2764:-142.523,0,-47.9708	0/1:137:41,96:41:1468:96:3402:-168.861,0,-50.2239	0/0:38:38,0:38:1364:0:0:0,-11.4391,-84.4504	0/1:44:15,29:15:540:29:1044:-51.2981,0,-19.6044	0/1:83:25,58:25:888:58:2088:-98.4415,0,-29.7792	0/1:88:35,53:35:1241:53:1900:-94.295,0,-51.2752	0/0:203:203,0:203:7256:0:0:0,-61.1091,-436.724	0/0:79:78,0:78:2778:0:0:0,-23.4803,-166.499	0/0:23:23,0:23:820:0:0:0,-6.92369,-49.5464	0/1:51:21,30:21:748:30:1033:-52.2096,0,-29.505	0/1:107:44,63:44:1571:63:2268:-112.109,0,-61.4199	0/0:27:27,0:27:960:0:0:0,-8.12781,-60.1516	0/0:66:66,0:66:2335:0:0:0,-19.868,-143.776	0/0:52:52,0:52:1860:0:0:0,-15.6536,-112.186	0/1:43:19,24:19:680:24:860:-38.6951,0,-28.0644	0/1:141:49,92:49:1752:92:3267:-153.821,0,-65.1443	0/1:54:17,37:17:608:37:1300:-67.4332,0,-19.5585	0/0:56:56,0:56:2004:0:0:0,-16.8577,-119.74	0/0:59:59,0:59:2099:0:0:0,-17.7608,-126.815
chr04	33073915	.	G	T,A	81229.5	PASS	AB=0.408851,0.590593;ABP=262.297,259.139;AC=154,34;AF=0.819149,0.180851;AN=188;AO=5014,2135;CIGAR=1X,1X;DP=7153;DPB=7153;DPRA=0,1.72838;EPP=10890.8,4639.1;EPPR=5.18177;GTI=8;LEN=1,1;MEANALT=1.44681,2.02564;MQM=24.9489,25.1082;MQMR=38;NS=94;NUMALT=2;ODDS=0.429503;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=179298,76454;QR=36;RO=1;RPL=5014,2135;RPP=10890.8,4639.1;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=5014,2135;SAP=10890.8,4639.1;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:36:0,36,0:0:0:36,0:1270,0:-79.7691,-10.8371,0,-79.7691,-10.8371,-79.7691	1/1:64:0,64,0:0:0:64,0:2292,0:-143.01,-19.2659,0,-143.01,-19.2659,-143.01	1/1:63:0,62,0:0:0:62,0:2203,0:-137.816,-18.6639,0,-137.816,-18.6639,-137.816	1/1:87:0,87,0:0:0:87,0:3091,0:-186.794,-26.1896,0,-186.794,-26.1896,-186.794	1/2:88:0,44,44:0:0:44,44:1575,1580:-165.561,-80.9503,-67.705,-84.8534,0,-71.6081	1/1:31:0,31,0:0:0:31,0:1108,0:-67.665,-9.33193,0,-67.665,-9.33193,-67.665	1/2:104:0,48,55:0:0:48,55:1700,1961:-196.619,-107.649,-93.1992,-88.9777,0,-72.421	1/1:82:0,82,0:0:0:82,0:2935,0:-183.058,-24.6845,0,-183.058,-24.6845,-183.058	1/1:87:0,87,0:0:0:87,0:3120,0:-193.608,-26.1896,0,-193.608,-26.1896,-193.608	1/1:52:0,52,0:0:0:52,0:1868,0:-111.02,-15.6536,0,-111.02,-15.6536,-111.02	1/2:62:0,25,37:0:0:25,37:890,1324:-117.634,-72.2871,-64.7613,-45.5875,0,-34.4494	1/1:61:0,60,0:0:0:60,0:2143,0:-133.962,-18.0618,0,-133.962,-18.0618,-133.962	1/1:39:0,39,0:0:0:39,0:1400,0:-88.5395,-11.7402,0,-88.5395,-11.7402,-88.5395	1/1:52:0,52,0:0:0:52,0:1864,0:-114.936,-15.6536,0,-114.936,-15.6536,-114.936	1/1:43:0,43,0:0:0:43,0:1544,0:-93.1697,-12.9443,0,-93.1697,-12.9443,-93.1697	1/1:31:0,31,0:0:0:31,0:1116,0:-69.8884,-9.33193,0,-69.8884,-9.33193,-69.8884	1/1:27:0,27,0:0:0:27,0:951,0:-60.8431,-8.12781,0,-60.8431,-8.12781,-60.8431	1/1:32:0,32,0:0:0:32,0:1144,0:-73.1897,-9.63296,0,-73.1897,-9.63296,-73.1897	1/1:18:0,18,0:0:0:18,0:648,0:-39.534,-5.41854,0,-39.534,-5.41854,-39.534	1/2:165:0,63,102:0:0:63,102:2255,3649:-317.869,-199.76,-180.796,-118.354,0,-87.6487	1/2:145:0,54,91:0:0:54,91:1932,3268:-264.501,-162.936,-146.68,-101.804,0,-74.4103	1/2:64:0,14,50:0:0:14,50:504,1786:-133.174,-105.151,-100.937,-28.2812,0,-13.2297	1/1:81:0,81,0:0:0:81,0:2890,0:-174.426,-24.3834,0,-174.426,-24.3834,-174.426	1/1:119:0,111,8:0:0:111,8:3983,288:-248.481,-33.4143,0,-234.412,-19.1153,-232.004	1/2:60:0,30,30:0:0:30,30:1063,1072:-114.085,-55.1842,-46.1533,-59.145,0,-50.1141	1/1:288:0,288,0:0:0:288,0:10315,0:-664.312,-86.6966,0,-664.312,-86.6966,-664.312	1/2:146:0,57,89:0:0:57,89:2048,3192:-270.982,-161.795,-144.636,-109.429,0,-82.6378	1/1:21:0,21,0:0:0:21,0:756,0:-46.8712,-6.32163,0,-46.8712,-6.32163,-46.8712	1/1:168:0,168,0:0:0:168,0:6011,0:-381.158,-50.573,0,-381.158,-50.573,-381.158	1/2:139:0,52,87:0:0:52,87:1860,3108:-257.684,-158.987,-143.334,-98.9377,0,-72.7481	1/2:136:0,55,81:0:0:55,81:1971,2908:-262.758,-159.452,-142.896,-103.552,0,-79.1686	1/2:42:0,18,24:0:0:18,24:644,864:-78.4635,-43.0381,-37.6196,-35.6687,0,-28.444	1/2:58:0,31,27:0:0:31,27:1116,972:-108.769,-49.2677,-39.9358,-59.7414,0,-51.6136	1/1:13:0,13,0:0:0:13,0:464,0:-29.068,-3.91339,0,-29.068,-3.91339,-29.068	1/1:30:0,29,1:0:0:29,1:1036,36:-64.3975,-8.72987,0,-63.3547,-7.53423,-63.0537	1/1:30:0,30,0:0:0:30,0:1065,0:-64.3675,-9.0309,0,-64.3675,-9.0309,-64.3675	1/2:142:0,69,73:0:0:69,73:2476,2628:-291.366,-156.742,-135.971,-134.884,0,-112.909	1/2:234:0,79,155:0:0:79,155:2814,5564:-430.674,-280.162,-256.38,-150.754,0,-104.094	1/1:54:0,54,0:0:0:54,0:1944,0:-119.295,-16.2556,0,-119.295,-16.2556,-119.295	1/1:18:0,18,0:0:0:18,0:644,0:-40.1692,-5.41854,0,-40.1692,-5.41854,-40.1692	1/1:85:0,83,2:0:0:83,2:2980,72:-183.795,-24.9855,0,-180.125,-21.0778,-179.523	1/1:20:0,20,0:0:0:20,0:712,0:-45.2205,-6.0206,0,-45.2205,-6.0206,-45.2205	1/2:155:0,75,80:0:0:75,80:2683,2860:-287.558,-145.435,-122.858,-142.363,0,-118.28	1/2:21:0,10,11:0:0:10,11:356,396:-40.5847,-22.2757,-19.2654,-18.555,0,-15.2437	1/2:60:0,28,32:0:0:28,32:1008,1148:-115.472,-64.096,-55.6672,-51.6215,0,-41.9885	1/1:80:0,80,0:0:0:80,0:2822,0:-183.105,-24.0824,0,-183.105,-24.0824,-183.105	1/1:73:0,73,0:0:0:73,0:2616,0:-161.361,-21.9752,0,-161.361,-21.9752,-161.361	1/2:192:0,85,107:0:0:85,107:3040,3836:-368.783,-213.48,-187.893,-155.548,0,-123.337	1/2:116:0,43,73:0:0:43,73:1544,2624:-225.669,-145.225,-132.28,-80.6899,0,-58.7147	1/1:63:0,63,0:0:0:63,0:2260,0:-137.378,-18.9649,0,-137.378,-18.9649,-137.378	1/2:179:0,77,102:0:0:77,102:2747,3641:-369.067,-217.931,-194.752,-151.396,0,-120.691	1/2:44:0,11,33:0:0:11,33:396,1179:-84.8882,-64.7049,-61.3935,-20.424,0,-10.49	1/1:67:0,66,1:0:0:66,1:2368,36:-146.156,-19.868,0,-145.112,-18.6723,-144.811	1/2:36:0,14,22:0:0:14,22:504,780:-74.3977,-46.3764,-42.162,-28.2812,0,-21.6585	1/1:6:0,6,0:0:0:6,0:216,0:-13.568,-1.80618,0,-13.568,-1.80618,-13.568	1/1:81:0,81,0:0:0:81,0:2883,0:-177.227,-24.3834,0,-177.227,-24.3834,-177.227	1/1:48:0,48,0:0:0:48,0:1720,0:-103.31,-14.4494,0,-103.31,-14.4494,-103.31	1/1:12:0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chr05	102448	.	A	G	82072.8	PASS	AB=0.477441;ABP=13.7875;AC=147;AF=0.781915;AN=188;AO=4199;CIGAR=1X;DP=5489;DPB=5489;DPRA=0;EPP=9017.09;EPPR=2776.01;GTI=0;LEN=1;MEANALT=1.05319;MQM=41.2348;MQMR=58.7899;NS=94;NUMALT=1;ODDS=0.56188;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=150406;QR=46093;RO=1285;RPL=12;RPP=9017.09;RPPR=2776.01;RPR=4187;RUN=1;SAF=4199;SAP=9121.02;SAR=0;SRF=1285;SRP=2793.35;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:13:8,5:8:288:5:176:-11.5146,0,-22.3415	0/1:49:25,24:25:900:24:860:-56.1267,0,-66.4235	1/1:85:0,85:0:0:85:3044:-251.501,-25.5876,0	1/1:167:0,167:0:0:167:5971:-508.313,-50.272,0	0/1:19:9,10:9:324:10:360:-24.8533,0,-23.7863	0/1:22:8,14:8:288:14:504:-35.0197,0,-19.6323	1/1:37:0,36:0:0:36:1288:-108.34,-10.8371,0	1/1:50:0,50:0:0:50:1796:-147.667,-15.0515,0	1/1:34:0,34:0:0:34:1208:-101.387,-10.235,0	1/1:74:0,74:0:0:74:2656:-227.12,-22.2762,0	1/1:24:0,24:0:0:24:864:-74.2994,-7.22472,0	1/1:59:0,59:0:0:59:2124:-175.203,-17.7608,0	0/1:32:16,16:16:576:16:572:-38.0321,0,-42.5172	1/1:16:0,16:0:0:16:566:-47.8427,-4.81648,0	0/1:27:18,9:18:648:9:324:-20.4232,0,-50.4899	1/1:22:0,22:0:0:22:786:-63.8137,-6.62266,0	1/1:9:0,9:0:0:9:324:-26.7802,-2.70927,0	1/1:13:0,13:0:0:13:464:-38.7428,-3.91339,0	1/1:9:0,9:0:0:9:324:-26.9331,-2.70927,0	0/1:130:70,60:70:2512:60:2160:-147.572,0,-187.12	0/1:169:96,73:96:3452:73:2609:-170.263,0,-259.78	0/1:78:59,19:59:2120:19:680:-35.1147,0,-167.588	0/1:59:36,23:36:1277:23:828:-54.5541,0,-97.4636	0/1:41:10,31:10:360:31:1112:-79.0028,0,-20.3534	0/1:24:14,10:14:504:10:360:-23.8163,0,-38.4221	1/1:187:2,185:2:72:185:6629:-571.253,-49.493,0	1/1:178:0,178:0:0:178:6326:-531.304,-53.5833,0	1/1:11:0,11:0:0:11:396:-34.1805,-3.31133,0	0/1:197:86,111:86:3080:111:3943:-281.531,0,-218.06	1/1:104:4,100:4:144:100:3577:-288.667,-17.9935,0	0/1:80:37,43:37:1313:43:1548:-108.244,0,-94.2821	0/1:30:4,26:4:140:26:922:-67.757,0,-3.86607	1/1:20:0,20:0:0:20:720:-59.3084,-6.0206,0	0/1:12:4,8:4:144:8:288:-20.7272,0,-9.69493	1/1:38:0,38:0:0:38:1349:-111.049,-11.4391,0	1/1:14:1,13:1:36:13:468:-35.4155,-0.617855,0	1/1:124:0,124:0:0:124:4447:-385.18,-37.3277,0	1/1:58:0,58:0:0:58:2080:-175.955,-17.4597,0	1/1:12:0,12:0:0:12:432:-36.3318,-3.61236,0	1/1:18:0,18:0:0:18:640:-53.5877,-5.41854,0	1/1:66:0,66:0:0:66:2364:-198.083,-19.868,0	0/1:10:5,5:5:180:5:180:-12.382,0,-13.5418	1/1:48:0,48:0:0:48:1724:-143.705,-14.4494,0	1/1:26:0,26:0:0:26:936:-80.3875,-7.82678,0	0/1:22:13,9:13:468:9:324:-21.7676,0,-35.7799	0/1:63:36,27:36:1296:27:964:-65.6874,0,-97.979	1/1:33:0,33:0:0:33:1180:-98.7987,-9.93399,0	0/1:75:42,33:42:1508:33:1184:-77.0994,0,-113.301	1/1:85:0,85:0:0:85:3052:-261.746,-25.5876,0	1/1:94:0,94:0:0:94:3370:-288.243,-28.2968,0	1/1:60:0,60:0:0:60:2156:-188.211,-18.0618,0	1/1:35:1,34:1:36:34:1217:-101.414,-6.93778,0	1/1:61:0,61:0:0:61:2192:-180.812,-18.3628,0	0/1:23:11,12:11:396:12:432:-31.1714,0,-29.0591	0/1:6:2,4:2:72:4:144:-10.856,0,-5.02729	0/1:96:40,56:40:1440:56:1992:-137.718,0,-100.346	0/1:16:5,11:5:180:11:396:-29.0392,0,-11.7356	1/1:25:1,24:1:36:24:864:-70.6111,-3.92748,0	1/1:82:0,82:0:0:82:2940:-253.08,-24.6845,0	0/1:37:18,19:18:644:19:684:-47.6457,0,-47.1525	1/1:56:1,55:1:36:55:1972:-164.915,-13.2594,0	1/1:23:0,23:0:0:23:824:-70.5164,-6.92369,0	0/1:223:117,106:117:4200:106:3793:-263.334,0,-310.762	0/1:100:62,38:62:2223:38:1368:-87.467,0,-170.17	0/1:34:24,10:24:860:10:356:-19.9185,0,-67.4845	0/1:38:21,17:21:756:17:612:-40.9973,0,-56.9281	1/1:126:0,125:0:0:125:4458:-379.641,-37.6288,0	1/1:122:2,120:2:72:120:4312:-361.336,-29.8889,0	1/1:10:0,10:0:0:10:356:-29.6779,-3.0103,0	1/1:31:1,30:1:36:30:1076:-87.4335,-5.73537,0	0/1:24:14,10:14:504:10:360:-24.5355,0,-38.4557	1/1:15:0,15:0:0:15:540:-46.7194,-4.51545,0	1/1:100:0,100:0:0:100:3592:-296.241,-30.103,0	1/1:52:0,52:0:0:52:1853:-151.657,-15.6536,0	1/1:106:0,105:0:0:105:3760:-318.755,-31.6082,0	0/1:192:99,93:99:3544:93:3340:-226.857,0,-260.594	0/1:38:26,12:26:936:12:432:-24.9001,0,-73.01	1/1:88:0,88:0:0:88:3164:-260.463,-26.4906,0	1/1:24:0,24:0:0:24:860:-71.5286,-7.22472,0	0/1:78:38,40:38:1352:40:1431:-94.56,0,-98.3581	0/1:79:36,42:36:1292:42:1512:-99.1812,0,-91.7229	1/1:149:0,149:0:0:149:5351:-458.479,-44.8535,0	0/1:44:24,20:24:860:20:720:-49.348,0,-64.4742	1/1:9:0,9:0:0:9:324:-28.0407,-2.70927,0	1/1:13:0,13:0:0:13:468:-39.772,-3.91339,0	0/1:81:37,43:37:1328:43:1540:-106.248,0,-95.3449	1/1:17:0,17:0:0:17:608:-49.5441,-5.11751,0	0/1:38:26,12:26:932:12:432:-23.9569,0,-72.5852	0/1:44:21,23:21:756:23:824:-54.2316,0,-54.9783	0/1:8:4,4:4:144:4:140:-9.63451,0,-10.9054	0/1:46:25,21:25:892:21:756:-50.1362,0,-66.6643	0/1:41:26,15:26:936:15:532:-33.8082,0,-72.2172	1/1:95:0,95:0:0:95:3388:-292.104,-28.5979,0	1/1:37:0,37:0:0:37:1332:-114.156,-11.1381,0
chr05	102469	.	ACCTT	ACTTTT,ACTT,ACTTT	84240.4	PASS	AB=0.610456,0.288916,0.120576;ABP=523.968,1609.12,6080.16;AC=101,41,46;AF=0.537234,0.218085,0.244681;AN=188;AO=3239,1203,602;CIGAR=2M1I1X2M,1M1D3M,2M1X2M;DP=5184;DPB=5640.6;DPRA=0,3.50654,6.45202;EPP=7036.41,2615.29,1310.24;EPPR=5.18177;GTI=10;LEN=6,1,1;MEANALT=3.43617,3.73529,3.51136;MQM=37.4545,58.1845,57.206;MQMR=52;NS=94;NUMALT=3;ODDS=4251.62;PAIRED=0,0,0;PAIREDR=0;PAO=0,0,0;PQA=0,0,0;PQR=0;PRO=0;QA=112222,42109,21501;QR=26;RO=1;RPL=3239,1203,602;RPP=7036.41,2615.29,1310.24;RPPR=5.18177;RPR=0,0,0;RUN=1,1,1;SAF=3239,1203,602;SAP=7036.41,2615.29,1310.24;SAR=0,0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,del,snp	GT:DP:AD:RO:QR:AO:QA:GL	2/3:12:0,2,8,2:0:0:2,8,2:60,280,72:-28.5959,-24.1172,-23.5151,-5.9133,-1.46184,-3.50506,-22.7169,-18.24,0,-22.1149	1/2:49:0,22,25,2:0:0:22,25,2:755,873,72:-126.626,-70.8571,-64.2344,-55.7435,0,-48.2177,-120.75,-64.9814,-49.8649,-120.148	1/3:79:0,64,3,8:0:0:64,3,8:2165,108,284:-182.839,-23.1204,-3.85449,-174.707,-14.9902,-173.804,-159.731,0,-151.598,-157.323	1/3:162:0,132,5,21:0:0:132,5,21:4597,167,756:-414.702,-61.6647,-21.9287,-401.583,-48.55,-400.078,-353.056,0,-339.936,-346.734	1/2:18:0,7,9,0:0:0:7,9,0:248,312,0:-43.958,-25.3659,-23.2587,-18.5906,0,-15.8813,-43.958,-25.3659,-18.5906,-43.958	1/2:19:0,11,6,2:0:0:11,6,2:377,212,68:-44.885,-17.267,-13.9557,-27.6164,0,-25.8102,-39.3679,-11.7545,-22.0965,-38.7658	1/3:35:0,28,0,4:0:0:28,0,4:964,0,144:-85.0554,-11.7461,-3.31723,-85.0554,-11.7461,-85.0554,-73.3163,0,-73.3163,-72.1121	1/1:46:0,43,1,2:0:0:43,1,2:1449,36,72:-120.073,-12.9443,0,-117.362,-10.2422,-117.061,-114.196,-7.05265,-111.485,-113.594	1/3:31:0,23,0,8:0:0:23,0,8:758,0,288:-79.6503,-23.8592,-16.9355,-79.6503,-23.8592,-79.6503,-56.1363,0,-56.1363,-53.7281	1/3:72:0,50,3,17:0:0:50,3,17:1751,96,608:-183.494,-49.2844,-34.2329,-176.571,-42.3679,-175.668,-134.242,0,-127.319,-129.124	1/3:23:0,20,0,3:0:0:20,0,3:704,0,89:-61.6411,-7.40126,-1.38066,-61.6411,-7.40126,-61.6411,-54.5413,0,-54.5413,-53.6383	1/3:57:0,46,1,8:0:0:46,1,8:1559,36,288:-138.562,-23.5001,-9.6527,-135.851,-20.7915,-135.55,-115.07,0,-112.359,-112.662	1/2:29:0,13,14,2:0:0:13,14,2:440,475,72:-71.0689,-38.4861,-34.5727,-32.5547,0,-28.3403,-65.1918,-32.6087,-26.6735,-64.5897	1/3:16:0,11,1,2:0:0:11,1,2:370,36,72:-33.5096,-5.88205,-2.57072,-30.8412,-3.21874,-30.5401,-27.6297,0,-24.9608,-27.0276	1/2:21:0,6,13,2:0:0:6,13,2:212,440,72:-52.0741,-35.6511,-33.8449,-16.4074,0,-12.494,-46.1972,-29.7734,-10.527,-45.5952	1/3:21:0,16,0,2:0:0:16,0,2:531,0,63:-44.663,-5.06147,-0.244985,-44.663,-5.06147,-44.663,-39.6194,0,-39.6194,-39.0173	1/1:9:0,8,0,0:0:0:8,0,0:270,0,0:-22.3513,-2.40824,0,-22.3513,-2.40824,-22.3513,-22.3513,-2.40824,-22.3513,-22.3513	1/1:12:0,10,0,1:0:0:10,0,1:348,0,36:-28.6693,-3.0103,0,-28.6693,-3.0103,-28.6693,-25.7287,-0.0641489,-25.7287,-25.4276	1/3:9:0,8,0,1:0:0:8,0,1:278,0,36:-23.784,-3.29039,-0.882152,-23.784,-3.29039,-23.784,-20.8483,0,-20.8483,-20.5472	1/2:116:0,45,58,12:0:0:45,58,12:1570,2005,432:-283.888,-162.862,-149.316,-121.014,0,-103.554,-248.919,-127.893,-86.0411,-245.307	1/2:158:0,57,91,9:0:0:57,91,9:1989,3177,324:-407.692,-258.29,-241.131,-149.386,0,-121.993,-381.543,-232.14,-123.233,-378.833	1/2:73:0,14,56,2:0:0:14,56,2:481,1969,72:-197.668,-160.256,-156.042,-37.3956,0,-20.5379,-191.805,-154.393,-31.5298,-191.203	1/2:60:0,16,38,6:0:0:16,38,6:576,1323,216:-152.048,-107.567,-102.75,-44.4707,0,-33.0316,-134.426,-89.9441,-26.8448,-132.62	1/2:39:0,21,9,8:0:0:21,9,8:702,320,284:-77.8606,-26.0757,-19.754,-51.7783,0,-49.069,-54.7384,-2.95968,-28.6506,-52.3301	1/2:20:0,7,11,2:0:0:7,11,2:237,388,72:-49.4217,-31.5363,-29.4291,-17.8653,0,-14.5539,-43.5509,-25.6665,-11.9873,-42.9489	1/3:180:0,145,3,26:0:0:145,3,26:5171,108,924:-479.786,-74.7096,-31.0602,-471.009,-65.9316,-470.106,-405.085,0,-396.307,-397.258	1/3:172:1,141,2,23:1:26:141,2,23:4912,68,824:-432.812,-65.0217,-24.6115,-427.867,-61.8119,-429.303,-366.078,0,-362.869,-361.191	1/3:10:0,8,0,2:0:0:8,0,2:281,0,72:-27.4912,-6.23466,-3.82642,-27.4912,-6.23466,-27.4912,-21.6102,0,-21.6102,-21.0081	1/2:185:0,86,79,18:0:0:86,79,18:2948,2793,644:-456.419,-226.632,-200.744,-229.776,0,-205.995,-404.068,-174.282,-177.422,-398.649	1/3:100:0,73,5,17:0:0:73,5,17:2516,176,608:-238.688,-49.562,-27.5869,-224.628,-35.5042,-223.123,-189.133,0,-175.073,-184.015	1/2:74:0,35,34,5:0:0:35,34,5:1239,1193,180:-192.065,-96.7064,-86.1704,-95.3447,0,-85.1097,-177.399,-82.0405,-80.6771,-175.894	1/2:29:0,23,3,1:0:0:23,3,1:788,108,36:-67.5501,-8.77209,-1.8484,-58.7804,0,-57.8773,-64.6115,-5.8331,-55.8414,-64.3104	1/3:22:0,18,0,4:0:0:18,0,4:612,0,144:-57.435,-11.8327,-6.41415,-57.435,-11.8327,-57.435,-45.9479,0,-45.9479,-44.7438	1/2:12:0,6,4,2:0:0:6,4,2:210,144,72:-27.1921,-11.7434,-9.93722,-15.4387,0,-14.2346,-21.3133,-5.86851,-9.55387,-20.7112	1/3:33:0,27,0,5:0:0:27,0,5:896,0,176:-79.5111,-13.8449,-5.71704,-79.5111,-13.8449,-79.5111,-65.6598,0,-65.6598,-64.1546	1/3:14:0,11,1,2:0:0:11,1,2:371,36,72:-33.2138,-5.85176,-2.54043,-30.275,-2.91553,-29.9739,-27.355,0,-24.4151,-26.753	1/3:118:0,94,0,15:0:0:94,0,15:3256,0,540:-298.259,-44.0671,-15.7703,-298.259,-44.0671,-298.259,-254.214,0,-254.214,-249.699	1/3:56:0,45,2,9:0:0:45,2,9:1572,72,324:-144.647,-26.4241,-12.8777,-139.041,-20.8212,-138.439,-118.229,0,-112.623,-115.52	1/3:11:0,6,0,3:0:0:6,0,3:190,0,108:-22.7118,-8.79807,-6.99189,-22.7118,-8.79807,-22.7118,-13.9126,0,-13.9126,-13.0095	1/1:18:0,15,0,1:0:0:15,0,1:531,0,36:-44.2779,-4.51545,0,-44.2779,-4.51545,-44.2779,-41.3448,-1.56896,-41.3448,-41.0438	1/3:65:0,54,0,9:0:0:54,0,9:1875,0,324:-166.988,-26.454,-10.1984,-166.988,-26.454,-166.988,-140.546,0,-140.546,-137.837	1/2:10:0,5,4,0:0:0:5,4,0:178,140,0:-24.815,-11.3826,-9.87747,-13.4192,0,-12.2151,-24.815,-11.3826,-13.4192,-24.815	1/3:44:0,32,2,6:0:0:32,2,6:1143,60,212:-103.284,-17.2775,-7.64454,-98.9871,-12.9907,-98.3851,-86.0211,0,-81.725,-84.2149	1/3:26:0,23,0,3:0:0:23,0,3:802,0,108:-70.9808,-9.17208,-2.24839,-70.9808,-9.17208,-70.9808,-62.1653,0,-62.1653,-61.2622	1/2:21:0,8,13,0:0:0:8,13,0:275,456,0:-58.8346,-37.4196,-35.0114,-21.7533,0,-17.8399,-58.8346,-37.4196,-21.7533,-58.8346	1/2:58:0,19,32,5:0:0:19,32,5:657,1131,180:-143.153,-91.8383,-86.1188,-51.3034,0,-41.6704,-128.471,-77.1565,-36.6178,-126.966	1/3:27:0,20,1,4:0:0:20,1,4:687,36,144:-62.1264,-11.7611,-5.74053,-59.4154,-9.05339,-59.1144,-50.3703,0,-47.659,-49.1662	1/2:68:0,27,36,4:0:0:27,36,4:936,1267,138:-174.783,-103.093,-94.9654,-71.7007,0,-60.8636,-163.843,-92.154,-60.7589,-162.639	1/3:82:0,64,1,14:0:0:64,1,14:2245,32,496:-212.793,-40.3962,-21.1303,-210.215,-37.8196,-209.914,-172.409,0,-169.831,-168.194	1/3:90:0,66,0,19:0:0:66,0,19:2269,0,680:-229.327,-55.0273,-35.1594,-229.327,-55.0273,-229.327,-174.31,0,-174.31,-168.59	1/3:58:0,45,1,10:0:0:45,1,10:1594,35,341:-152.764,-27.6588,-14.1124,-150.186,-25.0823,-149.885,-125.108,0,-122.531,-122.098	1/3:33:0,26,2,3:0:0:26,2,3:923,72,108:-80.1022,-8.80919,-0.982411,-74.4964,-3.20548,-73.8943,-71.2986,0,-65.6927,-70.3956	1/3:59:0,52,0,7:0:0:52,0,7:1793,0,248:-152.796,-20.557,-4.90342,-152.796,-20.557,-152.796,-132.589,0,-132.589,-130.481	1/2:16:0,10,5,1:0:0:10,5,1:355,176,32:-42.2376,-14.3548,-11.3445,-27.9062,0,-26.401,-39.6633,-11.7843,-25.3325,-39.3623	2/3:6:0,2,2,2:0:0:2,2,2:70,72,72:-11.7732,-6.63022,-6.02816,-5.8948,-0.758549,-5.29274,-5.89163,-0.7553,0,-5.28957	1/2:88:0,38,38,10:0:0:38,38,10:1255,1327,360:-201.043,-106.851,-95.4121,-94.1718,0,-82.7327,-171.701,-77.5098,-64.8233,-168.69	1/2:15:0,8,4,3:0:0:8,4,3:265,144,108:-31.9719,-11.7497,-9.34143,-20.2135,0,-19.0094,-23.1536,-2.93742,-11.3889,-22.2505	1/3:24:0,18,1,4:0:0:18,1,4:616,36,144:-59.5463,-11.7581,-6.33953,-56.6078,-8.81982,-56.3068,-47.7917,0,-44.8528,-46.5876	1/3:79:0,67,0,11:0:0:67,0,11:2321,0,396:-213.027,-32.3061,-12.1371,-213.027,-32.3061,-213.027,-180.73,0,-180.73,-177.419	1/2:34:0,12,17,5:0:0:12,17,5:431,608,180:-81.9654,-49.5799,-45.9676,-32.3793,0,-27.2618,-67.5529,-35.1692,-17.9617,-66.0477	1/3:56:0,44,2,8:0:0:44,2,8:1537,72,279:-140.336,-22.6489,-9.40359,-134.73,-17.0436,-134.128,-117.688,0,-112.082,-115.28	1/3:22:0,19,0,3:0:0:19,0,3:672,0,108:-60.8288,-9.16568,-3.44611,-60.8288,-9.16568,-60.8288,-52.0194,0,-52.0194,-51.1163	1/2:212:0,77,109,24:0:0:77,109,24:2687,3838,860:-522.236,-312.201,-289.022,-210.03,0,-177.218,-452.142,-242.107,-139.932,-444.917	1/2:97:0,35,59,3:0:0:35,59,3:1216,2095,108:-264.27,-170.642,-160.106,-93.6101,0,-75.8493,-255.458,-161.83,-84.7956,-254.555	1/2:30:0,9,19,2:0:0:9,19,2:299,668,68:-76.8001,-54.3855,-51.6762,-22.4027,0,-16.6831,-71.2913,-48.8779,-16.8887,-70.6892	1/2:35:0,13,20,2:0:0:13,20,2:458,712,72:-93.1564,-58.0334,-54.12,-35.115,0,-29.0944,-87.4169,-52.2945,-29.3732,-86.8148	1/3:122:0,103,1,14:0:0:103,1,14:3584,36,503:-316.121,-41.0036,-9.99754,-313.183,-38.0659,-312.882,-275.125,0,-272.188,-270.911	1/3:119:0,93,2,19:0:0:93,2,19:3252,72,677:-305.399,-55.1785,-27.1827,-299.524,-49.3029,-298.922,-250.231,0,-244.356,-244.512	1/3:10:0,7,0,2:0:0:7,0,2:236,0,72:-23.26,-5.88248,-3.77527,-23.26,-5.88248,-23.26,-17.3821,0,-17.3821,-16.7801	1/3:27:0,18,3,6:0:0:18,3,6:628,108,216:-63.829,-17.5446,-12.126,-55.0148,-8.7334,-54.1118,-46.2761,0,-37.4596,-44.4699	1/2:19:0,6,11,2:0:0:6,11,2:211,384,72:-47.609,-31.2183,-29.4121,-16.3781,0,-13.0668,-41.7388,-25.348,-10.5039,-41.1367	1/1:15:0,14,0,1:0:0:14,0,1:480,0,36:-41.3072,-4.21442,0,-41.3072,-4.21442,-41.3072,-38.3677,-0.917175,-38.3677,-38.0667	1/1:96:0,84,3,6:0:0:84,3,6:2874,104,216:-238.142,-25.2865,0,-229.916,-17.0637,-229.013,-220.695,-7.83345,-212.468,-218.889	1/1:50:0,45,0,4:0:0:45,0,4:1533,0,144:-126.465,-13.5464,0,-126.465,-13.5464,-126.465,-114.782,-1.85379,-114.782,-113.578	1/3:101:0,77,1,18:0:0:77,1,18:2693,36,640:-254.634,-52.1323,-28.953,-251.966,-49.4652,-251.665,-202.507,0,-199.839,-197.088	1/2:179:0,69,93,11:0:0:69,93,11:2411,3261,396:-449.8,-264.531,-243.76,-185.265,0,-157.269,-417.51,-232.241,-152.973,-414.199	1/2:32:0,9,21,1:0:0:9,21,1:315,708,36:-80.5267,-57.329,-54.6198,-23.1704,0,-16.8488,-77.5884,-54.3907,-20.2297,-7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chr05	102476	.	CTTTCTATA	TTTTCTCTA,TGTTCTCTA	81507.9	PASS	AB=0.404982,0.567804;ABP=173.026,89.5847;AC=146,42;AF=0.776596,0.223404;AN=188;AO=3163,1243;CIGAR=1X5M1X2M,2X4M1X2M;DP=4558;DPB=4622;DPRA=0,1.22496;EPP=6871.38,2702.15;EPPR=0;GTI=0;LEN=9,9;MEANALT=2.81915,3.28571;MQM=40.6073,58.9477;MQMR=0;NS=94;NUMALT=2;ODDS=0.235548;PAIRED=0,0;PAIREDR=0;PAO=86.3333,38.3333;PQA=2930.17,1210.67;PQR=0;PRO=0;QA=103717,43607;QR=0;RO=0;RPL=3163,1243;RPP=6871.38,2702.15;RPPR=0;RPR=0,0;RUN=1,1;SAF=3163,1243;SAP=6871.38,2702.15;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:12:0,3,8:0:0:3,8:107,277:-31.0181,-22.5631,-21.66,-8.50669,0,-6.09845	1/2:47:0,22,25:0:0:22,25:718,896:-127.187,-73.2889,-66.6663,-54.2284,0,-46.7027	1/1:66:0,63,0:0:0:63,0:2011,0:-170.413,-18.9649,0,-170.413,-18.9649,-170.413	1/1:134:0,128,0:0:0:128,0:4246,0:-368.146,-38.5318,0,-368.146,-38.5318,-368.146	1/2:15:0,7,8:0:0:7,8:246,277:-41.3552,-22.8569,-20.7497,-18.8344,0,-16.4261	1/2:19:0,11,8:0:0:11,8:330,284:-48.4133,-23.4836,-20.1722,-25.2554,0,-22.8471	1/1:31:0,30,0:0:0:30,0:952,0:-82.1075,-9.0309,0,-82.1075,-9.0309,-82.1075	1/1:39:0,37,0:0:0:37,0:1193,0:-100.6,-11.1381,0,-100.6,-11.1381,-100.6	1/1:27:0,25,0:0:0:25,0:817,0:-69.9166,-7.52575,0,-69.9166,-7.52575,-69.9166	1/1:61:0,55,0:0:0:55,0:1823,0:-158.97,-16.5567,0,-158.97,-16.5567,-158.97	1/1:19:0,19,0:0:0:19,0:621,0:-54.2026,-5.71957,0,-54.2026,-5.71957,-54.2026	1/1:45:0,44,0:0:0:44,0:1432,0:-122.118,-13.2453,0,-122.118,-13.2453,-122.118	1/2:29:0,14,15:0:0:14,15:454,521:-76.9731,-42.6822,-38.4678,-34.6166,0,-30.1012	1/1:13:0,12,0:0:0:12,0:394,0:-33.9919,-3.61236,0,-33.9919,-3.61236,-33.9919	1/2:26:0,8,17:0:0:8,17:272,588:-69.2183,-47.8412,-45.433,-21.4516,0,-16.3341	1/1:17:0,16,0:0:0:16,0:483,0:-40.8253,-4.81648,0,-40.8253,-4.81648,-40.8253	1/1:7:0,7,0:0:0:7,0:229,0:-19.6835,-2.10721,0,-19.6835,-2.10721,-19.6835	1/1:10:0,10,0:0:0:10,0:328,0:-28.3243,-3.0103,0,-28.3243,-3.0103,-28.3243	1/1:8:0,7,0:0:0:7,0:231,0:-19.286,-2.10721,0,-19.286,-2.10721,-19.286	1/2:117:0,47,69:0:0:47,69:1590,2438:-322.564,-198.101,-183.952,-124.05,0,-103.279	1/2:146:0,47,94:0:0:47,94:1534,3288:-384.743,-267.294,-253.146,-117.413,0,-89.1159	1/2:72:0,13,58:0:0:13,58:422,2041:-198.625,-166.022,-162.108,-32.454,0,-14.9943	1/2:58:0,21,36:0:0:21,36:704,1279:-159.604,-104.299,-97.9776,-55.3683,0,-44.5313	1/2:36:0,26,9:0:0:26,9:838,318:-90.3535,-25.9902,-18.1634,-64.4449,0,-61.7357	1/2:22:0,8,13:0:0:8,13:265,447:-56.4699,-36.1799,-33.7716,-20.2068,0,-16.2934	1/1:144:0,136,2:0:0:136,2:4528,72:-397.356,-40.9401,0,-391.516,-35.1133,-390.914	1/1:135:0,130,0:0:0:130,0:4194,0:-359.346,-39.1339,0,-359.346,-39.1339,-359.346	1/1:10:0,9,0:0:0:9,0:280,0:-24.5537,-2.70927,0,-24.5537,-2.70927,-24.5537	1/2:175:0,85,84:0:0:85,84:2805,2946:-460.266,-239.71,-214.123,-220.569,0,-195.283	1/1:78:0,71,4:0:0:71,4:2363,140:-202.061,-21.3731,0,-190.669,-10.0619,-189.464	1/2:67:0,31,34:0:0:31,34:1049,1217:-180.918,-99.2171,-89.8851,-81.7559,0,-71.5209	1/2:24:0,20,3:0:0:20,3:661,108:-59.0007,-8.83088,-2.81028,-50.2273,0,-49.3242	1/1:20:0,19,0:0:0:19,0:621,0:-52.8885,-5.71957,0,-52.8885,-5.71957,-52.8885	1/2:11:0,7,4:0:0:7,4:243,144:-30.4878,-12.1032,-9.99596,-18.7319,0,-17.5278	1/1:26:0,23,0:0:0:23,0:729,0:-61.6534,-6.92369,0,-61.6534,-6.92369,-61.6534	1/2:8:0,7,1:0:0:7,1:218,36:-19.4685,-2.93703,-0.829825,-16.5264,0,-16.2254	1/1:95:0,94,0:0:0:94,0:3061,0:-267.685,-28.2968,0,-267.685,-28.2968,-267.685	1/1:42:0,40,0:0:0:40,0:1347,0:-114.64,-12.0412,0,-114.64,-12.0412,-114.64	1/1:8:0,8,0:0:0:8,0:262,0:-22.7527,-2.40824,0,-22.7527,-2.40824,-22.7527	1/1:13:0,13,0:0:0:13,0:440,0:-37.3216,-3.91339,0,-37.3216,-3.91339,-37.3216	1/1:53:0,51,0:0:0:51,0:1670,0:-143.374,-15.3525,0,-143.374,-15.3525,-143.374	1/2:9:0,4,4:0:0:4,4:136,138:-21.5517,-11.1992,-9.99509,-10.3335,0,-9.12936	1/1:35:0,33,0:0:0:33,0:1128,0:-96.2523,-9.93399,0,-96.2523,-9.93399,-96.2523	1/1:24:0,24,0:0:0:24,0:811,0:-70.7687,-7.22472,0,-70.7687,-7.22472,-70.7687	1/2:19:0,5,13:0:0:5,13:153,457:-49.0439,-37.1705,-35.6654,-11.8682,0,-7.95485	1/2:57:0,20,36:0:0:20,36:689,1273:-158.172,-103.65,-97.629,-54.4819,0,-43.6448	1/1:24:0,23,0:0:0:23,0:749,0:-63.2313,-6.92369,0,-63.2313,-6.92369,-63.2313	1/2:68:0,25,40:0:0:25,40:753,1427:-174.069,-116.314,-108.789,-57.7364,0,-45.6952	1/1:61:0,60,0:0:0:60,0:1999,0:-172.264,-18.0618,0,-172.264,-18.0618,-172.264	1/1:78:0,72,0:0:0:72,0:2383,0:-207.351,-21.6742,0,-207.351,-21.6742,-207.351	1/1:50:0,48,0:0:0:48,0:1567,0:-138.125,-14.4494,0,-138.125,-14.4494,-138.125	1/1:27:0,25,1:0:0:25,1:810,36:-70.3874,-7.52575,0,-67.4482,-4.53635,-67.1471	1/1:55:0,55,0:0:0:55,0:1855,0:-156.383,-16.5567,0,-156.383,-16.5567,-156.383	1/2:15:0,5,10:0:0:5,10:171,324:-39.8002,-26.3611,-24.856,-13.6822,0,-10.6719	1/2:5:0,3,2:0:0:3,2:74,72:-11.9044,-6.23141,-5.32832,-5.98718,0,-5.38512	1/2:82:0,37,37:0:0:37,37:1161,1284:-193.875,-104.141,-93.0033,-89.755,0,-78.6169	1/2:15:0,10,5:0:0:10,5:299,162:-36.7339,-13.3937,-10.3834,-23.6538,0,-22.1486	1/1:21:0,20,1:0:0:20,1:659,36:-57.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chr05	176826	.	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chr05	231888	.	G	A	40554.1	PASS	AB=0.497617;ABP=3.23798;AC=38;AF=0.202128;AN=188;AO=2511;CIGAR=1X;DP=18956;DPB=18956;DPRA=1.28461;EPP=5438.22;EPPR=35649.9;GTI=2;LEN=1;MEANALT=1.10909;MQM=59.9964;MQMR=59.9791;NS=94;NUMALT=1;ODDS=4.03704;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=89924;QR=588023;RO=16436;RPL=2511;RPP=5455.58;RPPR=35658.6;RPR=0;RUN=1;SAF=2;SAP=5438.22;SAR=2509;SRF=1;SRP=35684.6;SRR=16435;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:25:14,11:14:496:11:388:-27.731,0,-37.4485	0/1:263:123,140:123:4408:140:5032:-373.845,0,-317.721	0/0:220:220,0:220:7880:0:0:0,-66.2266,-709.226	0/0:244:244,0:244:8727:0:0:0,-73.4513,-785.421	0/1:79:42,37:42:1504:37:1324:-95.6807,0,-111.873	0/1:38:23,15:23:824:15:540:-37.4974,0,-62.8153	0/0:108:107,1:107:3828:1:36:0,-28.913,-341.119	0/0:187:183,4:183:6535:4:144:0,-42.979,-574.921	0/0:97:97,0:97:3467:0:0:0,-29.1999,-312.241	0/0:69:68,1:68:2440:1:36:0,-17.1728,-216.257	0/0:345:344,1:344:12257:1:36:0,-100.257,-1099.23	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/1:67:29,38:29:1031:38:1364:-102.892,0,-72.9336	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.401	0/1:62:23,39:23:828:39:1395:-107.184,0,-56.1803	0/0:51:51,0:51:1823:0:0:0,-15.3525,-164.35	0/0:67:67,0:67:2365:0:0:0,-20.169,-213.108	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/0:208:208,0:208:7476:0:0:0,-62.6142,-672.879	0/1:169:78,91:78:2771:91:3256:-242.387,0,-198.758	0/1:189:85,104:85:3036:104:3685:-274.96,0,-216.574	0/1:101:34,67:34:1220:67:2391:-185.043,0,-79.7028	0/1:115:47,67:47:1688:67:2399:-181.637,0,-117.676	0/0:134:122,12:122:4360:12:432:0,-1.11682,-353.354	0/1:65:42,23:42:1500:23:813:-53.9222,0,-115.728	0/0:332:332,0:332:11912:0:0:0,-99.942,-1071.93	0/0:177:177,0:177:6340:0:0:0,-53.2823,-570.691	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:280:129,151:129:4608:151:5393:-401.212,0,-330.597	0/0:596:579,16:579:20708:16:576:0,-127.298,-1811.03	0/1:288:125,163:125:4480:163:5833:-438.384,0,-316.672	0/0:462:455,7:455:16297:7:252:0,-116.047,-1443.37	0/0:651:651,0:651:23305:0:0:0,-195.971,-2096.8	0/0:652:649,3:649:23172:3:108:0,-186.196,-2074.78	0/0:1238:1236,1:1236:44216:1:36:0,-369.136,-3973.71	0/0:286:281,5:281:10054:5:180:0,-69.5425,-888.241	0/0:171:171,0:171:6130:0:0:0,-51.4761,-551.797	0/0:257:257,0:257:9212:0:0:0,-77.3647,-829.049	0/0:394:394,0:394:14118:0:0:0,-118.606,-1270.38	0/0:489:489,0:489:17501:0:0:0,-147.204,-1574.71	0/0:234:234,0:234:8387:0:0:0,-70.441,-754.833	0/1:93:81,12:81:2904:12:432:-11.2254,0,-233.6	0/0:206:206,0:206:7363:0:0:0,-62.0122,-662.718	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/1:87:36,51:36:1283:51:1836:-139.331,0,-89.583	0/1:100:58,42:58:2084:42:1500:-105.192,0,-157.724	0/0:85:85,0:85:3048:0:0:0,-25.5875,-274.549	0/1:164:76,88:76:2708:88:3140:-233.458,0,-194.596	0/0:98:98,0:98:3492:0:0:0,-29.5009,-314.492	0/0:201:201,0:201:7220:0:0:0,-60.507,-649.848	0/0:137:137,0:137:4908:0:0:0,-41.2411,-441.869	0/0:491:484,7:484:17352:7:248:0,-125.142,-1538.15	0/0:122:122,0:122:4371:0:0:0,-36.7257,-393.563	0/1:36:15,21:15:540:21:747:-56.7172,0,-38.0995	0/0:425:415,9:415:14821:9:324:0,-98.4907,-1304.08	0/1:119:54,65:54:1928:65:2336:-174.677,0,-137.974	0/1:40:23,17:23:824:17:608:-43.0108,0,-62.4421	0/0:416:411,4:411:14722:4:144:0,-111.974,-1311.03	0/0:822:822,0:822:29416:0:0:0,-247.447,-2646.5	0/1:109:56,53:56:2003:53:1881:-136.754,0,-147.731	0/0:59:59,0:59:2112:0:0:0,-17.7608,-190.349	0/0:572:571,1:571:20390:1:36:0,-168.591,-1830.97	1/1:147:12,135:12:432:135:4836:-396.172,-5.03021,0	0/1:269:146,123:146:5228:123:4411:-316.184,0,-389.681	0/1:103:47,56:47:1665:56:2000:-149.268,0,-119.129	0/1:68:26,42:26:928:42:1504:-115.185,0,-63.3682	0/0:255:254,1:254:9099:1:36:0,-73.1644,-815.285	0/0:96:93,3:93:3344:3:108:0,-18.8237,-291.101	0/0:198:198,0:198:7073:0:0:0,-59.6039,-636.606	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/1:91:46,45:46:1652:45:1612:-117.976,0,-121.575	0/0:323:323,0:323:11527:0:0:0,-97.2327,-1037.31	0/0:89:89,0:89:3183:0:0:0,-26.7917,-286.693	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:129:129,0:129:4624:0:0:0,-38.8329,-416.323	0/1:244:99,145:99:3552:145:5192:-393.967,0,-246.436	0/1:120:65,55:65:2328:55:1976:-141.991,0,-173.656	0/0:117:116,1:116:4151:1:36:0,-31.6222,-370.174	0/0:1002:1000,2:1000:35782:2:72:0,-294.795,-3212.39	0/1:140:59,81:59:2111:81:2916:-220.53,0,-148.114	0/1:110:56,54:56:1996:54:1936:-141.403,0,-146.801	0/0:120:117,0:117:4192:0:0:0,-35.2205,-377.069	0/1:115:32,83:32:1143:83:2980:-233.813,0,-68.5602	0/0:42:42,0:42:1487:0:0:0,-12.6433,-134.124	0/0:83:83,0:83:2963:0:0:0,-24.9855,-266.903	0/1:135:54,80:54:1936:80:2880:-218.738,0,-133.819	0/0:43:43,0:43:1522:0:0:0,-12.9443,-137.272	0/1:95:39,56:39:1392:56:2008:-152.395,0,-96.9812	0/1:76:37,39:37:1316:39:1400:-103.421,0,-95.8635	0/1:126:103,23:103:3687:23:828:-36.9143,0,-294.101	0/1:351:295,56:295:10524:56:2008:-75.3318,0,-841.414	0/1:84:20,64:20:707:64:2304:-182.334,0,-38.6681	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:49:49,0:49:1751:0:0:0,-14.7505,-157.873
chr05	260254	.	C	T	118676	PASS	AB=0.489551;ABP=5.77839;AC=145;AF=0.771277;AN=188;AO=5572;CIGAR=1X;DP=7079;DPB=7079;DPRA=0;EPP=12076.4;EPPR=3258.05;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.991;MQMR=59.9774;NS=94;NUMALT=1;ODDS=2.4244;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=198275;QR=53095;RO=1503;RPL=1;RPP=12093.8;RPPR=3266.73;RPR=5571;RUN=1;SAF=2;SAP=12085.1;SAR=5570;SRF=1;SRP=3258.05;SRR=1502;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:29,32:29:1021:32:1131:-83.7344,0,-73.8374	0/1:55:30,25:30:1067:25:887:-63.5915,0,-79.7846	1/1:123:0,122:0:0:122:4331:-389.606,-36.7257,0	1/1:162:0,162:0:0:162:5778:-520.135,-48.7669,0	0/1:49:26,23:26:919:23:824:-59.7328,0,-68.2757	0/1:23:11,12:11:373:12:432:-32.2975,0,-26.9716	1/1:94:0,94:0:0:94:3337:-300.548,-28.2968,0	1/1:103:3,100:3:104:100:3557:-310.637,-21.3033,0	1/1:103:0,103:0:0:103:3673:-330.774,-31.0061,0	1/1:55:0,55:0:0:55:1955:-176.225,-16.5567,0	1/1:39:0,39:0:0:39:1393:-125.669,-11.7402,0	1/1:116:0,116:0:0:116:4130:-371.885,-34.9195,0	0/1:72:34,38:34:1207:38:1346:-99.7645,0,-87.2611	1/1:57:0,57:0:0:57:2024:-182.433,-17.1587,0	0/1:67:38,29:38:1335:29:1040:-73.7454,0,-100.28	1/1:54:0,54:0:0:54:1908:-171.996,-16.2556,0	1/1:30:1,29:1:36:29:1022:-88.6926,-5.43263,0	1/1:30:0,30:0:0:30:1054:-95.1692,-9.0309,0	1/1:32:0,32:0:0:32:1121:-101.195,-9.63296,0	0/1:121:65,56:65:2310:56:2003:-144.118,0,-171.735	0/1:74:28,46:28:962:46:1630:-124.711,0,-64.613	0/1:106:77,29:77:2720:29:1044:-62.3656,0,-213.134	0/1:130:76,54:76:2675:54:1910:-133.042,0,-201.861	1/1:67:4,63:4:129:63:2264:-192.095,-8.24135,0	0/1:85:45,40:45:1586:40:1423:-102.779,0,-117.441	1/1:231:1,230:1:36:230:8175:-732.168,-65.9397,0	1/1:182:0,182:0:0:182:6499:-584.995,-54.7875,0	1/1:30:0,30:0:0:30:1072:-96.7925,-9.0309,0	0/1:195:116,79:116:4129:79:2820:-195.339,0,-313.094	1/1:67:0,67:0:0:67:2395:-215.806,-20.169,0	0/1:56:24,32:24:851:32:1143:-86.321,0,-60.0518	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/1:8:6,2:6:207:2:72:-4.42848,0,-16.5587	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:23:13,10:13:460:10:360:-25.8206,0,-34.8117	1/1:230:0,230:0:0:230:8165:-734.87,-69.2369,0	1/1:93:0,93:0:0:93:3311:-298.102,-27.9958,0	1/1:53:0,53:0:0:53:1872:-168.757,-15.9546,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:64:0,64:0:0:64:2287:-206.091,-19.2659,0	0/1:32:18,14:18:644:14:496:-35.3413,0,-48.6576	1/1:88:0,88:0:0:88:3143:-283.095,-26.4906,0	1/1:45:0,45:0:0:45:1596:-143.93,-13.5464,0	0/1:54:25,29:25:870:29:1040:-77.6587,0,-62.3543	0/1:91:32,59:32:1129:59:2116:-163.315,0,-74.5226	1/1:91:0,91:0:0:91:3229:-290.833,-27.3937,0	0/1:113:49,64:49:1747:64:2258:-169.421,0,-123.497	1/1:97:0,97:0:0:97:3423:-308.285,-29.1999,0	1/1:52:0,52:0:0:52:1860:-167.68,-15.6536,0	1/1:189:0,189:0:0:189:6729:-605.687,-56.8947,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	1/1:69:0,69:0:0:69:2452:-220.933,-20.7711,0	0/1:74:36,38:36:1279:38:1359:-100.334,0,-93.1362	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:105:39,66:39:1374:66:2331:-178.44,0,-92.349	0/1:41:19,22:19:672:22:775:-57.729,0,-48.4646	0/1:8:3,5:3:108:5:176:-13.7768,0,-7.66693	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	0/1:75:39,36:39:1396:36:1272:-92.2056,0,-103.362	1/1:115:0,115:0:0:115:4074:-366.849,-34.6185,0	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:98:48,50:48:1695:50:1787:-131.611,0,-123.334	0/1:119:49,68:49:1729:68:2405:-181.146,0,-120.332	0/1:58:32,26:32:1144:26:928:-66.3785,0,-85.8098	0/1:47:20,27:20:707:27:968:-73.289,0,-49.8062	1/1:85:1,84:1:36:84:2975:-264.384,-21.9893,0	1/1:120:1,119:1:36:119:4236:-377.822,-32.5253,0	1/1:62:2,60:2:72:60:2135:-185.581,-11.8271,0	1/1:114:0,114:0:0:114:4087:-368.015,-34.3174,0	0/1:31:16,15:16:552:15:540:-39.6046,0,-40.6709	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	1/1:147:0,147:0:0:147:5210:-469.041,-44.2514,0	1/1:87:0,87:0:0:87:3091:-278.418,-26.1896,0	1/1:104:0,104:0:0:104:3677:-331.132,-31.3071,0	0/1:80:35,45:35:1238:45:1612:-121.288,0,-87.6405	0/1:75:38,36:38:1334:36:1284:-93.2275,0,-97.7225	1/1:43:1,42:1:36:42:1504:-132.056,-9.34602,0	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	0/1:43:26,17:26:923:17:608:-42.1077,0,-70.4425	0/1:77:42,35:42:1480:35:1256:-90.166,0,-110.312	1/1:187:0,187:0:0:187:6670:-600.371,-56.2926,0	0/1:70:45,25:45:1608:25:883:-58.7154,0,-123.447	1/1:74:0,74:0:0:74:2634:-237.306,-22.2762,0	1/1:48:0,48:0:0:48:1716:-154.726,-14.4494,0	0/1:139:62,77:62:2206:77:2740:-205,0,-156.961	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	0/1:64:28,36:28:959:36:1288:-96.9577,0,-67.3509	0/1:78:40,38:40:1405:38:1356:-98.8601,0,-103.265	0/1:45:22,23:22:775:23:820:-60.5762,0,-56.5248	0/1:91:46,45:46:1626:45:1616:-118.336,0,-119.234	0/1:64:46,18:46:1621:18:626:-37.3974,0,-126.911	1/1:100:1,99:1:27:99:3523:-314.581,-27.4032,0	1/1:112:1,111:1:36:111:3955:-352.544,-30.1171,0
chr05	260263	.	T	C	24911.1	PASS	AB=0.508498;ABP=4.85553;AC=43;AF=0.228723;AN=188;AO=1514;CIGAR=1X;DP=7154;DPB=7154;DPRA=1.00182;EPP=3281.94;EPPR=12237.1;GTI=1;LEN=1;MEANALT=1.01818;MQM=59.9756;MQMR=59.9933;NS=94;NUMALT=1;ODDS=3.58035;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53778;QR=201391;RO=5638;RPL=1;RPP=3281.94;RPPR=12237.1;RPR=1513;RUN=1;SAF=2;SAP=3273.27;SAR=1512;SRF=2;SRP=12228.4;SRR=5636;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:34,27:34:1188:27:959:-68.2626,0,-88.8593	0/1:57:27,30:27:964:30:1071:-79.5429,0,-69.9181	0/0:125:125,0:125:4475:0:0:0,-37.6287,-402.919	0/0:167:167,0:167:5952:0:0:0,-50.272,-535.788	0/1:49:25,24:25:892:24:856:-62.6106,0,-65.8492	0/1:23:13,10:13:460:10:352:-25.0945,0,-34.8117	0/0:94:94,0:94:3372:0:0:0,-28.2968,-303.695	0/0:105:103,2:103:3684:2:72:0,-24.7714,-324.926	0/0:103:103,0:103:3680:0:0:0,-31.0061,-331.404	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:41:41,0:41:1463:0:0:0,-12.3422,-131.965	0/0:121:121,0:121:4310:0:0:0,-36.4246,-388.077	0/1:73:39,34:39:1392:34:1216:-87.7714,0,-103.604	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.274	0/1:67:28,39:28:995:39:1395:-105.679,0,-69.695	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/0:31:30,1:30:1072:1:36:0,-5.73365,-93.1942	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/1:122:57,65:57:2052:65:2304:-170.893,0,-148.226	0/1:78:48,30:48:1708:30:1072:-73.3121,0,-130.525	0/1:105:28,77:28:1000:77:2724:-213.794,0,-58.7072	0/1:127:53,74:53:1908:74:2599:-195.925,0,-133.767	0/0:67:63,4:63:2252:4:140:0,-7.22443,-189.999	0/1:89:41,48:41:1472:48:1701:-126.582,0,-105.984	0/0:233:232,1:232:8281:1:36:0,-66.5417,-741.7	0/0:183:183,0:183:6544:0:0:0,-55.0885,-589.044	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/1:197:78,118:78:2772:118:4228:-321.338,0,-190.358	0/0:68:68,0:68:2431:0:0:0,-20.47,-219.045	0/1:56:32,24:32:1152:24:860:-60.8642,0,-87.1325	0/1:9:2,7:2:72:7:229:-18.2203,0,-4.12745	0/0:20:20,0:20:711:0:0:0,-6.0206,-64.3156	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:22:10,12:10:360:12:432:-32.5985,0,-26.1216	0/0:234:234,0:234:8366:0:0:0,-70.441,-752.946	0/0:95:95,0:95:3384:0:0:0,-28.5978,-304.549	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.278	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:67:66,0:66:2352:0:0:0,-19.868,-211.58	0/1:32:14,18:14:504:18:635:-47.844,0,-36.0651	0/0:87:86,1:86:3065:1:36:0,-22.5913,-272.48	0/0:46:46,0:46:1627:0:0:0,-13.8474,-146.718	0/1:56:32,24:32:1140:24:849:-59.8706,0,-86.0515	0/1:91:58,33:58:2084:33:1176:-78.754,0,-160.436	0/0:92:92,0:92:3283:0:0:0,-27.6948,-295.688	0/1:114:61,53:61:2180:53:1879:-135.07,0,-162.149	0/0:105:105,0:105:3760:0:0:0,-31.6081,-338.6	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.282	0/0:192:192,0:192:6869:0:0:0,-57.7978,-618.278	0/1:4:3,1:3:108:1:32:-1.99519,0,-8.87105	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.806	0/1:74:38,36:38:1364:36:1288:-93.9474,0,-100.784	0/1:9:3,6:3:108:6:212:-16.7155,0,-7.3659	0/1:106:66,40:66:2347:40:1440:-97.9885,0,-179.58	0/1:39:22,17:22:784:17:612:-43.6733,0,-59.1437	0/1:8:5,3:5:180:3:104:-7.29457,0,-14.1438	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:77:38,39:38:1352:39:1396:-102.76,0,-98.8011	0/0:117:116,1:116:4139:1:36:0,-31.6222,-369.096	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:101:52,49:52:1852:49:1751:-127.469,0,-136.556	0/1:117:68,49:68:2432:49:1756:-123.103,0,-183.915	0/1:59:26,33:26:932:33:1167:-87.5756,0,-66.4381	0/1:48:27,21:27:968:21:743:-52.7439,0,-72.9879	0/0:85:84,1:84:3016:1:36:0,-21.9893,-268.072	0/0:123:122,1:122:4384:1:36:0,-33.4284,-391.133	0/0:64:61,3:61:2192:3:99:0,-10.0293,-188.309	0/0:116:116,0:116:4118:0:0:0,-34.9195,-370.807	0/1:32:16,16:16:572:16:568:-41.8189,0,-42.1805	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:150:150,0:150:5353:0:0:0,-45.1545,-481.903	0/0:87:87,0:87:3088:0:0:0,-26.1896,-278.15	0/0:105:105,0:105:3738:0:0:0,-31.6081,-336.621	0/1:80:45,35:45:1608:35:1256:-89.2629,0,-120.928	0/1:74:36,38:36:1288:38:1307:-95.6472,0,-93.9474	0/0:44:43,1:43:1536:1:36:0,-9.64704,-134.935	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:43:17,26:17:595:26:927:-70.8031,0,-40.9324	0/1:76:36,40:36:1288:40:1421:-105.307,0,-93.3453	0/0:187:186,1:186:6605:1:36:0,-52.6943,-590.924	0/1:74:27,47:27:968:47:1645:-125.987,0,-65.1611	0/0:72:72,0:72:2575:0:0:0,-21.6742,-231.999	0/0:48:48,0:48:1699:0:0:0,-14.4494,-153.195	0/1:140:77,63:77:2764:63:2248:-160.439,0,-206.857	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/1:65:36,29:36:1280:29:1027:-73.1752,0,-95.9363	0/1:78:38,40:38:1364:40:1428:-105.337,0,-99.5804	0/1:44:23,21:23:819:21:748:-54.4,0,-60.7862	0/1:91:45,46:45:1588:46:1619:-118.604,0,-115.814	0/1:67:19,48:19:680:48:1695:-132.666,0,-41.3602	0/0:104:103,1:103:3692:1:36:0,-27.7088,-328.884	0/0:109:109,0:109:3896:0:0:0,-32.8123,-350.835
chr05	301645	.	GTCAAA	ATCAAA,ATCTAG	347790	PASS	AB=0.64559,0.350446;ABP=931.841,983.113;AC=156,32;AF=0.829787,0.170213;AN=188;AO=14947,1786;CIGAR=1X5M,1X2M1X1M1X;DP=16814;DPB=16816.5;DPRA=0,1.1666;EPP=32442.6,3881.26;EPPR=48.6112;GTI=4;LEN=1,6;MEANALT=1.98936,2.7561;MQM=36.099,29.3942;MQMR=46.2857;NS=94;NUMALT=2;ODDS=2.37339;PAIRED=0,0;PAIREDR=0;PAO=8,8;PQA=281.5,281.5;PQR=0;PRO=0;QA=451226,62870;QR=721;RO=21;RPL=6454,1786;RPP=607.007,3881.26;RPPR=3.94093;RPR=8493,0;RUN=1,1;SAF=6452,1786;SAP=609.379,3881.26;SAR=8495,0;SRF=9;SRP=3.94093;SRR=12;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:56:0,56,0:0:0:56,0:1783,0:-154.328,-16.8577,0,-154.328,-16.8577,-154.328	1/1:143:0,143,0:0:0:143,0:4232,0:-356.933,-43.0473,0,-356.933,-43.0473,-356.933	1/1:390:0,390,0:0:0:390,0:12318,0:-1061.5,-117.402,0,-1061.5,-117.402,-1061.5	1/1:444:0,441,1:0:0:441,1:13724,36:-1170.16,-132.754,0,-1167.92,-130.489,-1167.62	1/2:179:0,131,48:0:0:131,48:4030,1710:-415.823,-110.799,-71.3643,-305.314,0,-290.865	1/1:26:0,26,0:0:0:26,0:771,0:-65.2846,-7.82678,0,-65.2846,-7.82678,-65.2846	1/1:259:0,258,0:0:0:258,0:7692,0:-644.93,-77.6657,0,-644.93,-77.6657,-644.93	1/1:364:0,364,0:0:0:364,0:10431,0:-870.995,-109.575,0,-870.995,-109.575,-870.995	1/1:213:0,211,0:0:0:211,0:6071,0:-506.598,-63.5173,0,-506.598,-63.5173,-506.598	1/1:219:1,217,0:1:35:217,0:6527,0:-545.849,-62.6063,0,-546.15,-65.3235,-548.809	1/1:165:0,164,0:0:0:164,0:5134,0:-438.647,-49.3689,0,-438.647,-49.3689,-438.647	1/1:169:0,168,0:0:0:168,0:5214,0:-446.502,-50.573,0,-446.502,-50.573,-446.502	1/1:77:0,76,0:0:0:76,0:2316,0:-197.901,-22.8783,0,-197.901,-22.8783,-197.901	1/1:129:0,129,0:0:0:129,0:3998,0:-343.894,-38.8329,0,-343.894,-38.8329,-343.894	1/2:98:0,61,37:0:0:61,37:1910,1310:-229.109,-83.5211,-65.1582,-145.877,0,-134.739	1/1:112:0,112,0:0:0:112,0:3431,0:-293.103,-33.7154,0,-293.103,-33.7154,-293.103	1/1:128:0,127,0:0:0:127,0:3461,0:-284.101,-38.2308,0,-284.101,-38.2308,-284.101	1/1:80:0,80,0:0:0:80,0:2300,0:-192.273,-24.0824,0,-192.273,-24.0824,-192.273	1/1:81:0,81,0:0:0:81,0:2535,0:-217.544,-24.3834,0,-217.544,-24.3834,-217.544	1/2:389:0,253,136:0:0:253,136:8072,4763:-921.489,-303.175,-227.014,-618.604,0,-577.664	1/2:226:0,159,67:0:0:159,67:4638,2375:-496.609,-154.927,-107.063,-341.967,0,-321.798	1/2:215:0,110,104:0:0:110,104:3283,3653:-470.721,-230.612,-197.499,-240.104,0,-208.797	1/2:113:0,77,35:0:0:77,35:2412,1212:-260.002,-77.5572,-54.3778,-182.401,0,-171.865	1/1:234:0,233,1:0:0:233,1:6210,35:-504.642,-70.14,0,-502.35,-67.5602,-502.049	1/2:124:0,79,45:0:0:79,45:2391,1590:-283.704,-103.566,-79.7851,-180.425,0,-166.879	1/1:665:0,660,2:0:0:660,2:20094,72:-1688.11,-198.68,0,-1683.56,-194.1,-1682.96	1/1:406:0,405,0:0:0:405,0:12542,0:-1075.51,-121.917,0,-1075.51,-121.917,-1075.51	1/1:70:1,69,0:1:33:69,0:2049,0:-170.769,-17.773,0,-171.07,-20.7711,-173.738	1/2:403:1,258,143:1:36:258,143:8072,5028:-922.136,-314.797,-239.293,-605.491,0,-564.605	1/1:261:5,246,8:5:163:246,8:7358,281:-609.776,-61.4461,0,-592.827,-55.5976,-603.014	1/2:127:0,96,30:0:0:96,30:2833,1059:-274.321,-66.9767,-38.0778,-207.368,0,-198.337	1/2:13:0,8,5:0:0:8,5:266,180:-32.7444,-11.8476,-9.43933,-21.1999,0,-19.6947	1/1:43:0,43,0:0:0:43,0:1320,0:-113.161,-12.9443,0,-113.161,-12.9443,-113.161	1/1:4:0,4,0:0:0:4,0:129,0:-11.5808,-1.20412,0,-11.5808,-1.20412,-11.5808	1/1:15:0,15,0:0:0:15,0:492,0:-43.2135,-4.51545,0,-43.2135,-4.51545,-43.2135	1/1:15:0,15,0:0:0:15,0:522,0:-46.929,-4.51545,0,-46.929,-4.51545,-46.929	1/1:394:0,392,0:0:0:392,0:12284,0:-1045.75,-118.004,0,-1045.75,-118.004,-1045.75	1/1:319:0,319,0:0:0:319,0:9157,0:-764.436,-96.0286,0,-764.436,-96.0286,-764.436	1/1:146:1,145,0:1:34:145,0:4261,0:-356.219,-40.5515,0,-356.52,-43.6494,-359.278	1/1:7:0,7,0:0:0:7,0:226,0:-19.804,-2.10721,0,-19.804,-2.10721,-19.804	1/1:287:0,287,0:0:0:287,0:8583,0:-727.879,-86.3956,0,-727.879,-86.3956,-727.879	1/2:51:0,33,18:0:0:33,18:958,630:-111.51,-41.4477,-31.5137,-70.3435,0,-64.925	1/1:340:0,336,1:0:0:336,1:9928,36:-838.389,-101.146,0,-836.078,-98.8293,-835.777	1/1:146:0,145,0:0:0:145,0:4287,0:-358.556,-43.6494,0,-358.556,-43.6494,-358.556	1/2:83:0,54,28:0:0:54,28:1557,981:-175.068,-61.9865,-45.7309,-113.093,0,-104.664	1/2:159:0,102,57:0:0:102,57:3270,2015:-376.154,-126.83,-96.1245,-249.614,0,-232.455	1/1:256:2,253,0:2:69:253,0:7401,0:-615.271,-70.5239,0,-615.873,-76.1606,-621.48	1/2:303:0,170,133:0:0:170,133:5201,4653:-685.115,-295.684,-244.509,-389.715,0,-349.678	1/1:180:0,180,0:0:0:180,0:5421,0:-456.647,-54.1854,0,-456.647,-54.1854,-456.647	1/1:284:1,282,0:1:32:282,0:8429,0:-703.33,-82.3848,0,-703.631,-84.8905,-706.102	1/1:314:3,311,0:3:104:311,0:9704,0:-813.671,-84.8607,0,-814.574,-93.6203,-823.028	1/2:14:0,11,3:0:0:11,3:342,105:-32.7367,-6.94127,-3.62994,-26.0785,0,-25.1754	1/1:318:0,315,0:0:0:315,0:9328,0:-787.708,-94.8245,0,-787.708,-94.8245,-787.708	1/2:89:0,28,61:0:0:28,61:923,2145:-207.168,-135.615,-127.187,-71.8002,0,-53.4374	1/1:24:0,24,0:0:0:24,0:655,0:-53.9132,-7.22472,0,-53.9132,-7.22472,-53.9132	1/2:253:0,146,105:0:0:146,105: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chr05	1431904	.	G	A	123352	PASS	AB=0.525728;ABP=22.5638;AC=144;AF=0.765957;AN=188;AO=5838;CIGAR=1X;DP=7464;DPB=7464;DPRA=0;EPP=12680.1;EPPR=3527.31;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9418;MQMR=59.9778;NS=94;NUMALT=1;ODDS=11.2618;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=207874;QR=56437;RO=1623;RPL=0;RPP=12680.1;RPPR=3527.31;RPR=5838;RUN=1;SAF=0;SAP=12680.1;SAR=5838;SRF=0;SRP=3527.31;SRR=1623;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:15:11,4:11:379:4:137:-8.15194,0,-29.9251	0/1:99:29,70:29:1013:70:2501:-195.541,0,-61.6772	1/1:142:0,142:0:0:142:5056:-455.185,-42.7463,0	1/1:223:0,223:0:0:223:7955:-715.972,-67.1297,0	0/1:84:46,38:46:1596:38:1333:-94.9817,0,-118.64	0/1:22:8,14:8:284:14:494:-38.1704,0,-19.2807	0/1:76:35,41:35:1208:41:1476:-110.253,0,-86.139	1/1:113:0,113:0:0:113:4021:-362.068,-34.0164,0	0/1:41:34,7:34:1198:7:252:-10.6867,0,-95.7818	1/1:64:0,64:0:0:64:2276:-205.1,-19.2659,0	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	1/1:50:0,50:0:0:50:1780:-160.483,-15.0515,0	0/1:51:23,28:23:776:28:996:-74.6024,0,-54.7982	1/1:47:0,47:0:0:47:1657:-149.415,-14.1484,0	0/1:49:23,26:23:782:26:932:-69.4484,0,-55.9429	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	1/1:33:0,33:0:0:33:1171:-105.697,-9.93399,0	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	1/1:33:0,33:0:0:33:1162:-104.885,-9.93399,0	0/1:188:88,100:88:3073:100:3544:-262.575,0,-220.203	0/1:115:55,60:55:1931:60:2124:-156.799,0,-139.445	0/1:152:100,52:100:3473:52:1859:-121.832,0,-267.025	0/1:82:37,45:37:1274:45:1604:-119.966,0,-90.2716	1/1:62:5,57:5:180:57:2048:-168.039,-2.1118,0	1/1:38:0,38:0:0:38:1355:-122.25,-11.4391,0	1/1:248:0,248:0:0:248:8839:-795.498,-74.6554,0	0/1:218:103,115:103:3613:115:4119:-305.269,0,-259.753	1/1:18:0,18:0:0:18:628:-56.8455,-5.41854,0	0/1:228:90,136:90:3152:136:4858:-368.981,0,-215.487	0/1:122:54,68:54:1855:68:2416:-180.97,0,-130.498	0/1:81:35,46:35:1240:46:1628:-122.423,0,-87.521	0/1:25:9,16:9:316:16:576:-44.6492,0,-21.2531	1/1:23:0,23:0:0:23:812:-73.4004,-6.92369,0	0/1:12:8,4:8:273:4:129:-8.31619,0,-21.2878	1/1:23:0,23:0:0:23:815:-73.6708,-6.92369,0	0/1:13:5,8:5:176:8:288:-22.354,0,-12.2716	1/1:116:0,116:0:0:116:4092:-368.469,-34.9195,0	1/1:220:0,220:0:0:220:7883:-709.488,-66.2266,0	1/1:40:0,40:0:0:40:1415:-127.647,-12.0412,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:132:0,132:0:0:132:4706:-423.697,-39.736,0	0/1:22:9,13:9:290:13:460:-35.1127,0,-19.7894	1/1:125:1,124:1:36:124:4421:-394.464,-34.0305,0	1/1:40:0,40:0:0:40:1406:-126.835,-12.0412,0	0/1:22:13,9:13:439:9:324:-22.8832,0,-33.2108	0/1:79:35,44:35:1239:44:1578:-118.53,0,-88.0147	1/1:160:0,160:0:0:160:5684:-511.671,-48.1648,0	0/1:203:101,102:101:3552:102:3655:-267.877,0,-258.78	1/1:126:0,126:0:0:126:4512:-406.248,-37.9298,0	1/1:175:1,174:1:27:174:6194:-554.849,-49.9805,0	1/1:127:0,127:0:0:127:4523:-407.079,-38.2308,0	0/1:19:9,10:9:320:10:360:-27.0247,0,-23.4228	1/1:141:0,141:0:0:141:5020:-451.947,-42.4452,0	0/1:13:10,3:10:332:3:104:-5.78942,0,-26.2867	0/1:24:12,12:12:413:12:428:-31.6341,0,-30.2731	0/1:148:73,75:73:2537:75:2679:-196.802,0,-184.028	1/1:36:0,36:0:0:36:1260:-113.696,-10.8371,0	0/1:17:12,5:12:424:5:180:-11.4346,0,-33.3789	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:48:13,35:13:460:35:1237:-97.1829,0,-27.2859	1/1:66:0,66:0:0:66:2360:-212.659,-19.868,0	1/1:9:0,9:0:0:9:316:-28.7789,-2.70927,0	0/1:173:79,94:79:2785:94:3334:-248.197,0,-198.813	0/1:134:59,75:59:2080:75:2658:-199.128,0,-147.13	0/1:71:36,35:36:1252:35:1247:-91.1553,0,-91.6061	0/1:108:43,64:43:1486:64:2262:-171.268,0,-101.455	1/1:147:0,147:0:0:147:5248:-472.456,-44.2514,0	1/1:112:0,112:0:0:112:3969:-357.243,-33.7154,0	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:68:0,68:0:0:68:2417:-217.785,-20.47,0	0/1:32:14,18:14:487:18:631:-47.4827,0,-34.5262	1/1:10:0,10:0:0:10:360:-32.7157,-3.0103,0	1/1:74:1,73:1:36:73:2597:-230.379,-18.6779,0	1/1:36:0,36:0:0:36:1279:-115.412,-10.8371,0	1/1:95:0,95:0:0:95:3383:-304.686,-28.5979,0	1/1:182:0,182:0:0:182:6481:-583.373,-54.7875,0	0/1:85:41,44:41:1395:44:1580:-116.904,0,-100.252	1/1:167:3,164:3:108:164:5846:-516.176,-40.1968,0	0/1:17:13,4:13:451:4:144:-8.19611,0,-35.8023	0/1:115:46,69:46:1606:69:2467:-187.507,0,-110.209	0/1:107:54,53:54:1924:53:1885:-137.716,0,-141.227	1/1:150:0,150:0:0:150:5371:-483.521,-45.1545,0	0/1:55:27,28:27:931:28:1000:-73.6418,0,-67.5449	1/1:36:1,35:1:27:35:1247:-109.834,-8.1373,0	1/1:19:0,19:0:0:19:684:-61.8857,-5.71957,0	0/1:53:24,29:24:801:29:1036:-77.5993,0,-56.4443	1/1:17:0,17:0:0:17:600:-54.3292,-5.11751,0	0/1:47:26,21:26:863:21:735:-52.323,0,-63.8238	0/1:40:22,18:22:741:18:644:-46.2494,0,-54.961	1/1:35:0,35:0:0:35:1240:-111.904,-10.5361,0	0/1:68:28,40:28:931:40:1414:-107.086,0,-63.6206	0/1:28:18,10:18:636:10:352:-23.5894,0,-49.1392	1/1:101:0,101:0:0:101:3612:-325.28,-30.404,0	1/1:57:1,56:1:36:56:1973:-174.245,-13.5604,0
chr05	1431911	.	G	A	121773	PASS	AB=0.511793;ABP=7.2613;AC=143;AF=0.760638;AN=188;AO=5813;CIGAR=1X;DP=7544;DPB=7544;DPRA=0;EPP=12625.8;EPPR=3759.66;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9472;MQMR=59.989;NS=94;NUMALT=1;ODDS=2.451;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=206250;QR=61310;RO=1730;RPL=0;RPP=12625.8;RPPR=3759.66;RPR=5813;RUN=1;SAF=0;SAP=12625.8;SAR=5813;SRF=0;SRP=3759.66;SRR=1730;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:15:11,4:11:383:4:137:-8.15194,0,-30.2878	0/1:102:31,71:31:1103:71:2516:-195.986,0,-68.8747	1/1:145:0,145:0:0:145:5173:-465.71,-43.6494,0	1/1:216:0,216:0:0:216:7698:-692.856,-65.0225,0	0/1:87:48,39:48:1696:39:1387:-98.9392,0,-126.734	0/1:23:10,13:10:356:13:462:-34.9925,0,-25.4576	0/1:77:36,41:36:1292:41:1459:-108.425,0,-93.4045	1/1:116:0,116:0:0:116:4148:-373.495,-34.9195,0	0/1:41:34,7:34:1205:7:252:-10.6867,0,-96.4117	1/1:64:1,63:1:32:63:2251:-199.654,-16.0666,0	1/1:22:0,22:0:0:22:749:-67.7234,-6.62266,0	1/1:48:0,48:0:0:48:1703:-153.554,-14.4494,0	0/1:56:27,29:27:943:29:1027:-75.8845,0,-68.3255	1/1:45:0,45:0:0:45:1592:-143.57,-13.5464,0	0/1:50:25,25:25:871:25:892:-65.5482,0,-63.654	1/1:40:0,40:0:0:40:1412:-127.377,-12.0412,0	1/1:34:0,34:0:0:34:1183:-106.773,-10.235,0	1/1:26:0,26:0:0:26:915:-82.6656,-7.82678,0	1/1:28:1,27:1:36:27:940:-81.3153,-4.83057,0	0/1:195:94,101:94:3342:101:3590:-264.608,0,-242.297	0/1:113:56,57:56:1974:57:1996:-145.889,0,-143.917	0/1:154:108,46:108:3862:46:1647:-102.159,0,-301.416	0/1:82:39,43:39:1396:43:1540:-114.209,0,-101.255	1/1:62:5,57:5:180:57:2033:-166.689,-2.1118,0	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	1/1:248:0,248:0:0:248:8786:-790.735,-74.6554,0	0/1:231:115,116:115:4110:116:4141:-303.336,0,-300.546	1/1:19:0,19:0:0:19:659:-59.6323,-5.71957,0	0/1:246:102,144:102:3630:144:5117:-386.621,0,-252.849	0/1:125:56,69:56:1983:69:2445:-182.674,0,-141.115	0/1:86:41,45:41:1456:45:1571:-115.788,0,-105.447	0/1:27:10,16:10:352:16:561:-42.7736,0,-23.9691	1/1:23:0,23:0:0:23:816:-73.7617,-6.92369,0	0/1:14:9,5:9:320:5:149:-9.48995,0,-24.9279	1/1:20:0,20:0:0:20:708:-64.0456,-6.0206,0	0/1:14:6,8:6:201:8:288:-22.053,0,-14.2026	1/1:117:0,117:0:0:117:4046:-364.333,-35.2205,0	1/1:216:0,216:0:0:216:7658:-689.261,-65.0225,0	1/1:40:0,40:0:0:40:1407:-126.926,-12.0412,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	1/1:131:0,131:0:0:131:4678:-420.953,-39.4349,0	0/1:23:9,14:9:311:14:500:-38.4125,0,-21.4	1/1:129:1,128:1:36:128:4592:-409.789,-35.2346,0	1/1:41:0,41:0:0:41:1444:-130.256,-12.3422,0	0/1:27:17,10:17:604:10:356:-24.2534,0,-46.5628	0/1:82:38,44:38:1330:44:1548:-114.925,0,-95.3067	1/1:153:0,153:0:0:153:5359:-482.45,-46.0576,0	0/1:213:107,106:107:3791:106:3777:-275.999,0,-277.269	1/1:121:0,121:0:0:121:4298:-386.998,-36.4246,0	1/1:175:1,174:1:36:174:6216:-555.937,-49.082,0	1/1:126:0,126:0:0:126:4502:-405.346,-37.9298,0	0/1:20:10,10:10:356:10:360:-26.7237,0,-26.3606	1/1:140:0,140:0:0:140:4998:-449.968,-42.1442,0	0/1:15:10,5:10:341:5:180:-12.0366,0,-26.5023	0/1:21:9,12:9:324:12:424:-32.1748,0,-23.1842	0/1:153:75,78:75:2663:78:2755:-202.134,0,-193.859	1/1:36:0,36:0:0:36:1271:-114.686,-10.8371,0	0/1:18:12,6:12:432:6:212:-14.0063,0,-33.8027	1/1:21:0,21:0:0:21:733:-66.2897,-6.32163,0	0/1:51:17,34:17:612:34:1215:-94.3032,0,-40.0609	1/1:68:0,68:0:0:68:2403:-216.525,-20.47,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:173:81,92:81:2883:92:3259:-241.449,0,-207.629	0/1:136:59,77:59:2101:77:2736:-205.526,0,-148.418	0/1:70:37,33:37:1309:33:1163:-83.8984,0,-97.0374	0/1:107:46,61:46:1620:61:2154:-161.914,0,-113.876	1/1:143:0,143:0:0:143:5061:-455.634,-43.0473,0	1/1:111:0,111:0:0:111:3948:-355.353,-33.4143,0	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	1/1:68:0,68:0:0:68:2417:-217.786,-20.47,0	0/1:31:14,17:14:496:17:604:-45.3587,0,-35.6423	1/1:10:0,10:0:0:10:352:-31.9896,-3.0103,0	1/1:77:0,77:0:0:77:2751:-247.832,-23.1793,0	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	1/1:95:0,95:0:0:95:3360:-302.616,-28.5979,0	1/1:176:0,176:0:0:176:6305:-567.536,-52.9813,0	0/1:88:42,46:42:1482:46:1616:-119.235,0,-107.182	1/1:161:3,158:3:100:158:5590:-493.894,-39.1354,0	0/1:16:12,4:12:432:4:136:-7.75906,0,-34.4047	0/1:118:49,69:49:1739:69:2442:-184.501,0,-121.272	0/1:108:54,54:54:1911:54:1892:-138.045,0,-139.753	1/1:156:0,156:0:0:156:5588:-503.042,-46.9607,0	0/1:57:29,28:29:1015:28:977:-70.97,0,-74.5021	1/1:38:0,38:0:0:38:1347:-121.529,-11.4391,0	1/1:20:1,19:1:36:19:660:-56.1228,-2.42233,0	0/1:63:33,30:33:1151:30:1065:-77.1957,0,-84.9304	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	0/1:46:26,20:26:905:20:712:-50.5593,0,-67.9154	0/1:40:22,18:22:773:18:644:-46.2494,0,-57.8483	1/1:36:0,36:0:0:36:1271:-114.692,-10.8371,0	0/1:70:31,39:31:1095:39:1372:-102.704,0,-77.787	0/1:29:19,10:19:667:10:352:-23.2883,0,-51.6248	1/1:94:0,94:0:0:94:3333:-300.184,-28.2968,0	1/1:58:0,58:0:0:58:2072:-186.751,-17.4597,0
chr05	1485854	.	A	C	145960	PASS	AB=0.457393;ABP=78.5057;AC=144;AF=0.765957;AN=188;AO=7037;CIGAR=1X;DP=9674;DPB=9674;DPRA=0;EPP=15283.7;EPPR=5718.33;GTI=2;LEN=1;MEANALT=1.05319;MQM=51.1883;MQMR=59.8651;NS=94;NUMALT=1;ODDS=0.224487;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=251725;QR=93830;RO=2632;RPL=0;RPP=15283.7;RPPR=5718.33;RPR=7037;RUN=1;SAF=7037;SAP=15283.7;SAR=0;SRF=2632;SRP=5718.33;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:72:34,38:34:1212:38:1360:-100.254,0,-87.7122	0/1:140:74,66:74:2648:66:2372:-170.251,0,-196.316	1/1:114:0,114:0:0:114:4075:-365.529,-34.3174,0	1/1:190:1,189:1:36:189:6783:-604.913,-53.5974,0	0/1:115:64,51:64:2270:51:1809:-127.93,0,-169.896	0/1:86:53,33:53:1900:33:1179:-79.893,0,-145.389	0/1:135:65,70:65:2272:70:2507:-184.079,0,-164.066	1/1:126:1,125:1:36:125:4466:-395.504,-34.3315,0	0/1:134:72,61:72:2565:61:2188:-155.841,0,-190.702	1/1:105:0,104:0:0:104:3728:-333.113,-31.3071,0	1/1:40:0,40:0:0:40:1436:-129.034,-12.0412,0	1/1:51:0,51:0:0:51:1824:-163.851,-15.3525,0	0/1:52:36,15:36:1292:15:540:-33.0071,0,-101.042	1/1:82:0,82:0:0:82:2935:-262.096,-24.6845,0	0/1:53:26,27:26:932:27:968:-70.9844,0,-68.2443	1/1:30:0,30:0:0:30:1072:-96.5546,-9.0309,0	1/1:52:0,52:0:0:52:1855:-166.059,-15.6536,0	1/1:36:0,36:0:0:36:1292:-116.207,-10.8371,0	1/1:11:0,11:0:0:11:392:-35.511,-3.31133,0	0/1:172:86,86:86:3076:86:3059:-222.356,0,-225.29	0/1:162:84,78:84:2989:78:2779:-200.935,0,-220.475	0/1:149:95,54:95:3408:54:1933:-128.737,0,-262.049	0/1:99:54,45:54:1932:45:1584:-112.344,0,-144.355	1/1:170:13,157:13:453:157:5633:-463.037,-10.0757,0	1/1:108:0,108:0:0:108:3875:-347.627,-32.5112,0	1/1:279:0,279:0:0:279:9992:-895.77,-83.9874,0	0/1:265:146,119:146:5221:119:4280:-303.576,0,-390.254	1/1:25:0,25:0:0:25:896:-80.7603,-7.52575,0	0/1:291:154,137:154:5467:137:4882:-349.681,0,-404.529	0/1:312:203,109:203:7220:109:3912:-257.027,0,-555.932	0/1:150:98,52:98:3482:52:1863:-121.448,0,-268.395	0/1:15:12,3:12:413:3:108:-5.53439,0,-32.9824	1/1:16:0,16:0:0:16:561:-50.5112,-4.81648,0	0/1:9:3,6:3:104:6:216:-16.8341,0,-6.99354	1/1:7:0,7:0:0:7:252:-22.7445,-2.10721,0	0/1:5:1,4:1:36:4:144:-11.7648,0,-2.09312	1/1:146:0,146:0:0:146:5231:-469.155,-43.9504,0	1/1:276:1,275:1:36:275:9802:-874.034,-79.486,0	1/1:26:0,26:0:0:26:936:-84.2823,-7.82678,0	1/1:7:0,7:0:0:7:248:-22.6112,-2.10721,0	1/1:187:7,180:7:252:180:6438:-554.582,-33.2637,0	0/1:20:9,11:9:309:11:396:-29.8717,0,-22.1201	1/1:169:0,169:0:0:169:6050:-541.66,-50.8741,0	1/1:56:0,56:0:0:56:2012:-180.639,-16.8577,0	0/1:63:46,17:46:1640:17:595:-34.5247,0,-128.924	0/1:71:34,37:34:1216:37:1322:-97.4082,0,-87.8157	1/1:144:0,144:0:0:144:5142:-460.933,-43.3483,0	0/1:261:152,109:152:5392:109:3887:-269.013,0,-406.84	1/1:128:0,128:0:0:128:4573:-410.226,-38.5318,0	1/1:171:1,170:1:36:170:6083:-541.789,-47.8779,0	1/1:103:0,103:0:0:103:3685:-329.958,-31.0061,0	0/1:7:4,3:4:144:3:104:-7.57532,0,-11.2064	1/1:116:0,116:0:0:116:4124:-369.324,-34.9195,0	0/1:34:23,11:23:816:11:392:-25.2995,0,-63.5151	0/1:31:14,17:14:474:17:600:-44.7883,0,-33.6478	0/1:108:45,63:45:1612:63:2268:-170.383,0,-112.858	1/1:64:0,64:0:0:64:2304:-205.468,-19.2659,0	0/1:12:8,4:8:288:4:140:-9.19743,0,-22.655	1/1:21:1,20:1:36:20:720:-61.3668,-2.72336,0	0/1:99:54,45:54:1925:45:1611:-115.115,0,-143.678	1/1:103:2,101:2:72:101:3628:-318.363,-24.1694,0	1/1:8:0,8:0:0:8:278:-25.0428,-2.40824,0	0/1:214:78,136:78:2770:136:4872:-372.223,0,-185.118	0/1:243:119,124:119:4246:124:4444:-325.373,0,-308.976	0/1:88:36,52:36:1292:52:1846:-137.628,0,-90.0916	0/1:120:54,66:54:1940:66:2368:-176.144,0,-138.323	1/1:163:2,160:2:72:160:5702:-503.01,-42.2894,0	1/1:75:2,73:2:72:73:2603:-226.933,-15.7405,0	1/1:13:0,13:0:0:13:455:-41.1873,-3.91339,0	1/1:77:0,76:0:0:76:2704:-242.118,-22.8783,0	0/1:77:49,28:49:1756:28:1008:-67.6302,0,-135.145	1/1:10:0,10:0:0:10:352:-31.5708,-3.0103,0	1/1:163:1,162:1:36:162:5770:-513.214,-45.4696,0	1/1:61:1,60:1:36:60:2156:-189.373,-14.7646,0	1/1:206:0,206:0:0:206:7357:-657.458,-62.0122,0	1/1:193:0,193:0:0:193:6924:-621.465,-58.0988,0	0/1:168:92,76:92:3304:76:2720:-191.782,0,-246.969	1/1:95:2,93:2:72:93:3336:-292.146,-21.791,0	0/1:36:15,21:15:536:21:752:-56.9565,0,-37.7377	0/1:135:64,71:64:2304:71:2544:-187.699,0,-166.981	0/1:134:83,51:83:2969:51:1832:-122.412,0,-226.991	1/1:239:1,238:1:36:238:8540:-761.273,-68.3479,0	0/1:96:41,55:41:1464:55:1976:-147.84,0,-103.157	1/1:40:0,40:0:0:40:1427:-127.866,-12.0412,0	1/1:61:0,61:0:0:61:2192:-196.507,-18.3628,0	0/1:130:76,54:76:2724:54:1936:-134.77,0,-204.907	1/1:37:0,37:0:0:37:1332:-119.494,-11.1381,0	0/1:67:41,26:41:1472:26:936:-63.9011,0,-112.606	0/1:57:31,26:31:1108:26:924:-65.8441,0,-82.8723	1/1:31:0,31:0:0:31:1108:-99.7875,-9.33193,0	0/1:49:28,21:28:984:21:740:-51.8382,0,-74.1165	0/1:52:40,12:40:1425:12:424:-22.5431,0,-112.892	1/1:199:0,199:0:0:199:7112:-636.285,-59.905,0	1/1:56:0,56:0:0:56:2014:-180.767,-16.8577,0
chr05	1485863	.	CAAA	CAAC,TAAC	255642	PASS	AB=0.452346,0.54472;ABP=98.4173,86.9128;AC=143,44;AF=0.760638,0.234043;AN=188;AO=7030,2661;CIGAR=3M1X,1X2M1X;DP=9727;DPB=9727.25;DPRA=0,1.28189;EPP=4154.31,13.4303;EPPR=6.91895;GTI=2;LEN=1,4;MEANALT=1.88298,2.35849;MQM=51.2499,59.8407;MQMR=53.2;NS=94;NUMALT=2;ODDS=1.04287;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=251378,94118;QR=148;RO=5;RPL=5348,1274;RPP=4154.31,13.4303;RPPR=6.91895;RPR=1682,1387;RUN=1,1;SAF=7030,2661;SAP=15268.5,5781.3;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:73:0,38,35:0:0:38,35:1350,1230:-209.763,-100.466,-89.0273,-109.649,0,-99.1128	1/2:140:0,66,74:0:0:66,74:2343,2628:-404.462,-214.476,-194.608,-190.34,0,-168.064	1/1:114:0,113,0:0:0:113,0:4048,0:-362.741,-34.0164,0,-362.741,-34.0164,-362.741	1/1:188:0,187,1:0:0:187,1:6724,36:-602.911,-56.2926,0,-599.974,-52.9954,-599.673	1/2:116:0,52,64:0:0:52,64:1859,2267:-336.003,-184.982,-169.329,-151.376,0,-132.11	1/2:86:0,32,54:0:0:32,54:1148,1922:-250.092,-157.001,-147.368,-93.4479,0,-77.1922	1/2:135:0,68,66:0:0:68,66:2440,2343:-389.233,-190.934,-170.464,-198.342,0,-178.474	1/1:125:0,124,0:0:0:124,0:4447,0:-397.243,-37.3277,0,-397.243,-37.3277,-397.243	1/2:136:0,60,76:0:0:60,76:2134,2695:-392.963,-219.917,-201.855,-173.4,0,-150.522	1/1:105:0,105,0:0:0:105,0:3717,0:-332.571,-31.6082,0,-332.571,-31.6082,-332.571	1/1:40:0,40,0:0:0:40,0:1432,0:-128.679,-12.0412,0,-128.679,-12.0412,-128.679	1/1:51:0,51,0:0:0:51,0:1823,0:-163.589,-15.3525,0,-163.589,-15.3525,-163.589	1/2:53:0,14,39:0:0:14,39:500,1358:-150.907,-110.285,-106.07,-40.9753,0,-29.2351	1/1:83:0,83,0:0:0:83,0:2961,0:-264.433,-24.9855,0,-264.433,-24.9855,-264.433	1/2:54:0,27,27:0:0:27,27:968,949:-156.054,-77.5963,-69.4685,-78.8112,0,-70.6834	1/1:31:0,31,0:0:0:31,0:1099,0:-98.9839,-9.33193,0,-98.9839,-9.33193,-98.9839	1/1:51:0,51,0:0:0:51,0:1821,0:-162.77,-15.3525,0,-162.77,-15.3525,-162.77	1/1:37:0,37,0:0:0:37,0:1332,0:-119.791,-11.1381,0,-119.791,-11.1381,-119.791	1/1:11:0,11,0:0:0:11,0:392,0:-35.511,-3.31133,0,-35.511,-3.31133,-35.511	1/2:173:0,85,88:0:0:85,88:3030,3132:-501.062,-255.615,-230.028,-245.802,0,-219.311	1/2:165:0,81,84:0:0:81,84:2900,2950:-476.12,-240.448,-216.065,-236.026,0,-210.739	1/2:150:0,53,96:0:0:53,96:1895,3388:-429.73,-275.996,-260.041,-153.847,0,-124.948	1/2:100:0,44,55:0:0:44,55:1552,1940:-283.623,-157.768,-144.522,-125.848,0,-109.291	1/1:173:0,159,13:0:0:159,13:5662,454:-506.931,-47.8638,0,-470.002,-10.8421,-466.089	1/1:110:1,109,0:1:25:109,0:3885,0:-345.92,-30.6134,0,-346.221,-32.8123,-348.168	1/1:279:0,278,0:0:0:278,0:9957,0:-892.233,-83.6863,0,-892.233,-83.6863,-892.233	1/2:263:0,117,146:0:0:117,146:4204,5197:-764.901,-423.923,-388.702,-341.335,0,-297.385	1/1:25:0,25,0:0:0:25,0:892,0:-80.4045,-7.52575,0,-80.4045,-7.52575,-80.4045	1/2:296:0,137,159:0:0:137,159:4877,5643:-855.447,-460.122,-418.881,-395.679,0,-347.815	1/2:318:1,111,204:1:29:111,204:3953,7177:-902.521,-581.944,-550.838,-318.586,0,-259.484	1/2:151:0,53,97:0:0:53,97:1900,3433:-433.367,-279.75,-263.795,-153.739,0,-124.539	1/2:16:0,4,12:0:0:4,12:140,410:-44.9796,-33.6148,-32.4107,-11.712,0,-8.09963	1/1:16:0,16,0:0:0:16,0:576,0:-51.8611,-4.81648,0,-51.8611,-4.81648,-51.8611	1/2:9:0,6,3:0:0:6,3:212,108:-26.2914,-9.17208,-7.3659,-17.476,0,-16.5729	0/1:7:1,6,0:1:36:6,0:216,0:-17.3981,0,-1.49106,-17.6992,-3.29724,-20.6373	1/2:5:0,4,1:0:0:4,1:144,36:-15.0035,-3.29724,-2.09312,-12.0659,0,-11.7648	1/1:146:0,146,0:0:0:146,0:5222,0:-468.308,-43.9504,0,-468.308,-43.9504,-468.308	1/1:279:0,279,0:0:0:279,0:9932,0:-889.598,-83.9874,0,-889.598,-83.9874,-889.598	1/1:26:0,26,0:0:0:26,0:932,0:-83.9281,-7.82678,0,-83.9281,-7.82678,-83.9281	1/1:7:0,7,0:0:0:7,0:248,0:-22.6112,-2.10721,0,-22.6112,-2.10721,-22.6112	1/1:185:0,177,7:0:0:177,7:6348,246:-569.317,-53.2823,0,-549.294,-33.1932,-547.187	1/2:20:0,11,9:0:0:11,9:396,324:-59.0181,-26.7966,-23.4853,-32.581,0,-29.8717	1/1:169:0,168,0:0:0:168,0:5986,0:-536.578,-50.573,0,-536.578,-50.573,-536.578	1/1:56:0,56,0:0:0:56,0:2016,0:-180.994,-16.8577,0,-180.994,-16.8577,-180.994	1/2:63:0,16,45:0:0:16,45:572,1587:-175.797,-129.296,-124.479,-46.5733,0,-33.0269	1/2:71:0,37,34:0:0:37,34:1332,1212:-206.797,-98.5933,-87.4552,-108.56,0,-98.3251	1/1:144:0,142,0:0:0:142,0:5083,0:-455.387,-42.7463,0,-455.387,-42.7463,-455.387	1/2:260:0,108,151:0:0:108,151:3869,5350:-749.25,-435.823,-403.311,-313.423,0,-267.967	1/1:130:0,130,0:0:0:130,0:4651,0:-417.029,-39.1339,0,-417.029,-39.1339,-417.029	1/1:171:0,169,0:0:0:169,0:6080,0:-545.167,-50.8741,0,-545.167,-50.8741,-545.167	1/1:104:0,104,0:0:0:104,0:3689,0:-330.477,-31.3071,0,-330.477,-31.3071,-330.477	1/2:7:0,2,5:0:0:2,5:72,179:-20.8141,-14.9552,-14.3532,-6.21747,0,-4.71232	1/1:118:0,118,0:0:0:118,0:4231,0:-378.667,-35.5215,0,-378.667,-35.5215,-378.667	1/2:35:0,11,24:0:0:11,24:396,844:-101.269,-69.0443,-65.733,-32.581,0,-25.3562	1/2:30:0,16,14:0:0:16,14:576,488:-86.6546,-40.0349,-35.2184,-46.9722,0,-42.7578	1/2:109:1,62,46:1:28:62,46:2228,1624:-310.082,-130.1,-113.654,-178.138,0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chr05	1485874	.	TCT	TT	134603	PASS	AB=0.43838;ABP=157.691;AC=144;AF=0.765957;AN=188;AO=6677;CIGAR=1M1D1M;DP=9344;DPB=7117.67;DPRA=0;EPP=14501.9;EPPR=5746.56;GTI=3;LEN=1;MEANALT=1.17021;MQM=51.3013;MQMR=59.8988;NS=94;NUMALT=1;ODDS=0.995875;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=234807;QR=92963;RO=2649;RPL=6677;RPP=14501.9;RPPR=5746.56;RPR=0;RUN=1;SAF=6677;SAP=14501.9;SAR=0;SRF=2649;SRP=5755.24;SRR=0;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:34,34:34:1170:34:1186:-86.0521,0,-85.1305	0/1:139:73,66:73:2544:66:2314:-165.55,0,-187.364	1/1:108:0,108:0:0:108:3792:-340.232,-32.5112,0	1/1:185:1,184:1:36:184:6520:-581.374,-52.0923,0	0/1:114:62,50:62:2176:50:1762:-124.273,0,-162.031	0/1:84:54,30:54:1900:30:1052:-68.9948,0,-145.989	0/1:129:64,64:64:2270:64:2275:-165.031,0,-165.672	1/1:121:0,120:0:0:120:4218:-377.443,-36.1236,0	0/1:133:74,57:74:2578:57:2015:-141.103,0,-192.518	1/1:102:0,102:0:0:102:3575:-320.245,-30.7051,0	1/1:40:0,40:0:0:40:1401:-125.912,-12.0412,0	1/1:47:0,47:0:0:47:1616:-145.321,-14.1484,0	0/1:51:39,12:39:1347:12:415:-22.2183,0,-105.943	1/1:79:0,79:0:0:79:2720:-242.888,-23.7814,0	0/1:52:27,25:27:942:25:888:-64.1334,0,-69.4383	1/1:30:0,30:0:0:30:1014:-91.3768,-9.0309,0	1/1:51:0,50:0:0:50:1767:-158.174,-15.0515,0	1/1:37:0,37:0:0:37:1284:-115.524,-11.1381,0	1/1:10:0,10:0:0:10:352:-31.9247,-3.0103,0	0/1:169:87,81:87:3046:81:2841:-203.673,0,-223.439	0/1:162:84,78:84:2950:78:2736:-196.97,0,-216.966	0/1:150:96,52:96:3358:52:1827:-119.291,0,-257.57	0/1:98:55,43:55:1925:43:1524:-107.368,0,-144.022	1/1:161:13,148:13:458:148:5214:-425.549,-6.91198,0	1/1:100:0,100:0:0:100:3531:-317.073,-30.103,0	1/1:262:0,262:0:0:262:9271:-831.315,-78.8699,0	0/1:253:145,108:145:5142:108:3777:-262.29,0,-386.764	1/1:23:0,23:0:0:23:812:-73.2318,-6.92369,0	0/1:288:158,129:158:5594:129:4554:-321.937,0,-416.981	0/1:309:205,104:205:7120:104:3660:-235.646,0,-547.856	0/1:147:97,49:97:3415:49:1739:-112.233,0,-263.362	0/1:15:12,3:12:420:3:108:-5.53439,0,-33.6182	1/1:14:0,14:0:0:14:496:-44.7849,-4.21442,0	0/1:8:3,5:3:108:5:180:-14.0896,0,-7.66693	1/1:5:0,5:0:0:5:167:-15.1099,-1.50515,0	0/1:5:1,4:1:36:4:144:-11.7648,0,-2.09312	1/1:137:0,137:0:0:137:4873:-437.107,-41.2411,0	1/1:261:0,261:0:0:261:9160:-820.829,-78.5688,0	1/1:25:0,25:0:0:25:875:-78.8344,-7.52575,0	1/1:6:0,6:0:0:6:216:-19.7408,-1.80618,0	1/1:177:7,170:7:252:170:5999:-515.448,-30.2534,0	0/1:20:9,11:9:324:11:387:-29.0621,0,-23.4853	1/1:166:0,166:0:0:166:5880:-526.858,-49.971,0	1/1:54:0,54:0:0:54:1915:-171.956,-16.2556,0	0/1:62:46,16:46:1582:16:541:-29.9823,0,-124	0/1:71:34,37:34:1210:37:1312:-96.3668,0,-87.2745	1/1:140:0,140:0:0:140:4983:-446.587,-42.1442,0	0/1:249:154,95:154:5399:95:3360:-225.821,0,-411.09	1/1:130:0,130:0:0:130:4595:-411.994,-39.1339,0	1/1:160:0,160:0:0:160:5640:-506.275,-48.1648,0	1/1:99:0,99:0:0:99:3485:-312.184,-29.802,0	0/1:8:5,3:5:180:3:104:-7.27429,0,-14.1438	1/1:109:0,109:0:0:109:3869:-346.408,-32.8123,0	0/1:35:24,11:24:818:11:396:-25.3562,0,-63.3916	0/1:29:14,15:14:486:15:536:-39.4755,0,-35.3375	0/1:106:46,60:46:1588:60:2093:-155.851,0,-111.295	1/1:59:0,59:0:0:59:2108:-188.078,-17.7608,0	0/1:11:8,3:8:285:3:108:-6.73851,0,-22.6831	1/1:21:0,21:0:0:21:752:-67.8475,-6.32163,0	0/1:95:53,41:53:1859:41:1436:-100.615,0,-138.97	1/1:97:2,95:2:70:95:3313:-290.266,-22.5526,0	1/1:8:0,8:0:0:8:284:-25.4306,-2.40824,0	0/1:205:77,128:77:2721:128:4477:-339.89,0,-183.421	0/1:238:122,116:122:4311:116:4104:-296.657,0,-316.522	0/1:85:37,48:37:1278:48:1664:-121.921,0,-89.727	0/1:120:56,64:56:1953:64:2237:-164.602,0,-139.829	1/1:153:2,151:2:72:151:5324:-469.64,-39.2209,0	1/1:73:1,72:1:36:72:2517:-222.49,-18.3769,0	1/1:13:0,13:0:0:13:442:-40.0217,-3.91339,0	1/1:72:0,72:0:0:72:2518:-225.671,-21.6742,0	0/1:78:51,27:51:1801:27:948:-61.9637,0,-138.889	1/1:10:0,10:0:0:10:341:-30.0126,-3.0103,0	1/1:154:0,154:0:0:154:5387:-482.234,-46.3586,0	1/1:57:1,56:1:36:56:1962:-172.087,-13.5604,0	1/1:188:0,188:0:0:188:6618:-592.773,-56.5936,0	1/1:190:0,190:0:0:190:6696:-601.207,-57.1957,0	0/1:163:92,70:92:3260:70:2469:-171.899,0,-244.615	1/1:93:2,91:2:72:91:3170:-277.472,-21.189,0	0/1:34:15,19:15:529:19:663:-49.5866,0,-37.7068	0/1:136:68,68:68:2389:68:2414:-175.845,0,-174.328	0/1:130:81,48:81:2815:48:1662:-108.937,0,-214.391	1/1:222:1,221:1:36:221:7725:-689.269,-63.2304,0	0/1:94:40,53:40:1428:53:1832:-135.499,0,-100.462	1/1:38:0,38:0:0:38:1340:-120.176,-11.4391,0	1/1:56:0,56:0:0:56:1937:-173.769,-16.8577,0	0/1:126:77,48:77:2726:48:1703:-115.202,0,-206.816	1/1:35:0,35:0:0:35:1203:-108.253,-10.5361,0	0/1:66:40,26:40:1388:26:886:-59.7612,0,-105.346	0/1:53:31,22:31:1095:22:780:-54.3498,0,-82.9036	1/1:29:0,29:0:0:29:1010:-91.0064,-8.72987,0	0/1:51:29,22:29:1002:22:759:-53.0923,0,-75.1319	0/1:51:40,11:40:1427:11:392:-19.9709,0,-113.375	1/1:190:0,189:0:0:189:6658:-597.057,-56.8947,0	1/1:57:0,57:0:0:57:2002:-179.755,-17.1587,0
chr05	1501894	.	A	G	254366	PASS	AB=0.486818;ABP=15.4331;AC=145;AF=0.771277;AN=188;AO=12173;CIGAR=1X;DP=16438;DPB=16438;DPRA=0;EPP=26436.3;EPPR=9240.45;GTI=2;LEN=1;MEANALT=1.11702;MQM=59.8672;MQMR=59.9939;NS=94;NUMALT=1;ODDS=2.53025;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=434030;QR=151572;RO=4254;RPL=0;RPP=26436.3;RPPR=9240.45;RPR=12173;RUN=1;SAF=12173;SAP=26436.3;SAR=0;SRF=4254;SRP=9240.45;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:52,13:52:1864:13:468:-22.7015,0,-148.472	0/1:268:154,114:154:5483:114:4081:-286.798,0,-412.919	1/1:181:0,181:0:0:181:6440:-579.687,-54.4864,0	1/1:445:0,445:0:0:445:15877:-1428.6,-133.958,0	0/1:190:91,98:91:3253:98:3508:-258.671,0,-235.735	0/1:138:72,66:72:2561:66:2300:-165.713,0,-189.197	0/1:300:169,131:169:6022:131:4662:-329.432,0,-451.775	1/1:195:0,195:0:0:195:6923:-623.132,-58.7009,0	0/1:237:150,87:150:5392:87:3105:-208.332,0,-414.061	1/1:201:0,201:0:0:201:7208:-648.748,-60.507,0	1/1:58:0,58:0:0:58:2088:-188.187,-17.4597,0	1/1:87:0,87:0:0:87:3097:-278.926,-26.1896,0	0/1:81:42,39:42:1512:39:1404:-102.276,0,-111.991	1/1:77:1,76:1:36:76:2728:-242.164,-19.581,0	0/1:91:43,48:43:1533:48:1720:-127.689,0,-110.867	1/1:71:0,71:0:0:71:2544:-229.204,-21.3731,0	1/1:79:0,79:0:0:79:2836:-255.461,-23.7814,0	1/1:45:0,45:0:0:45:1616:-145.481,-13.5464,0	1/1:54:0,54:0:0:54:1940:-174.848,-16.2556,0	0/1:487:228,259:228:8128:259:9260:-686.722,0,-584.931	0/1:349:161,188:161:5772:188:6718:-499.614,0,-414.535	0/1:229:162,67:162:5744:67:2404:-147.681,0,-448.14	0/1:223:110,113:110:3914:113:4041:-296.747,0,-285.322	1/1:208:17,191:17:597:191:6803:-558.25,-8.55812,0	1/1:141:0,141:0:0:141:5041:-453.828,-42.4452,0	1/1:586:0,586:0:0:586:20846:-1875.6,-176.404,0	0/1:478:242,236:242:8635:236:8426:-614.45,0,-633.251	1/1:43:0,43:0:0:43:1536:-138.533,-12.9443,0	0/1:558:233,325:233:8235:325:11659:-881.193,0,-573.188	0/1:174:95,78:95:3363:78:2770:-197.101,0,-250.446	0/1:402:151,251:151:5404:251:8938:-683.392,0,-365.477	0/1:38:18,20:18:629:20:720:-53.6896,0,-45.4946	1/1:27:0,27:0:0:27:955:-86.2637,-8.12781,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:25:0,25:0:0:25:896:-80.9599,-7.52575,0	0/1:41:17,24:17:612:24:856:-65.0189,0,-43.0712	1/1:249:0,249:0:0:249:8854:-796.82,-74.9565,0	1/1:285:2,283:2:72:283:10098:-901.743,-78.9568,0	1/1:89:0,89:0:0:89:3188:-287.13,-26.7917,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:183:1,182:1:36:182:6517:-583.009,-51.4902,0	0/1:58:31,27:31:1112:27:948:-68.1726,0,-82.9316	1/1:242:0,242:0:0:242:8638:-777.414,-72.8493,0	1/1:123:0,123:0:0:123:4367:-393.189,-37.0267,0	0/1:86:41,45:41:1445:45:1604:-118.762,0,-104.455	0/1:226:122,104:122:4364:104:3694:-264.628,0,-324.884	1/1:221:0,220:0:0:220:7848:-705.982,-66.2266,0	0/1:392:216,176:216:7611:176:6260:-445.481,0,-567.028	1/1:245:0,245:0:0:245:8728:-785.509,-73.7524,0	1/1:295:1,294:1:36:294:10501:-941.325,-85.2056,0	1/1:146:1,145:1:36:145:5151:-459.486,-40.3521,0	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	1/1:218:0,218:0:0:218:7793:-701.391,-65.6245,0	0/1:95:48,47:48:1716:47:1669:-121.895,0,-126.128	0/1:69:38,30:38:1356:30:1068:-75.6023,0,-101.511	0/1:310:164,146:164:5835:146:5179:-372.923,0,-431.942	1/1:126:0,125:0:0:125:4450:-400.31,-37.6288,0	0/1:29:19,10:19:669:10:356:-23.6514,0,-51.8041	1/1:38:0,38:0:0:38:1360:-122.701,-11.4391,0	0/1:134:71,63:71:2552:63:2252:-162.599,0,-189.584	1/1:130:1,129:1:36:129:4611:-411.547,-35.5356,0	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	0/1:369:188,180:188:6680:180:6350:-460.25,0,-490.137	0/1:286:170,116:170:6077:116:4099:-282.965,0,-460.937	0/1:126:62,63:62:2224:63:2249:-164.47,0,-162.436	0/1:170:93,77:93:3291:77:2739:-195.574,0,-245.232	1/1:341:7,334:7:252:334:11938:-1051.24,-79.6223,0	1/1:217:2,215:2:72:215:7597:-676.914,-58.4868,0	1/1:32:0,32:0:0:32:1152:-103.985,-9.63296,0	1/1:144:0,144:0:0:144:5105:-459.539,-43.3483,0	0/1:104:39,65:39:1392:65:2313:-177.116,0,-94.2719	1/1:36:0,36:0:0:36:1284:-115.863,-10.8371,0	1/1:162:0,162:0:0:162:5796:-521.75,-48.7669,0	1/1:151:1,150:1:36:150:5360:-478.908,-41.8573,0	1/1:348:1,346:1:36:346:12323:-1105.19,-101.219,0	1/1:382:0,381:0:0:381:13643:-1227.28,-114.692,0	0/1:148:86,62:86:3072:62:2205:-154.161,0,-232.157	1/1:158:0,158:0:0:158:5646:-506.238,-47.5627,0	0/1:32:16,16:16:557:16:564:-41.4491,0,-40.8226	0/1:259:146,113:146:5194:113:4052:-286.898,0,-389.633	0/1:259:128,131:128:4562:131:4665:-341.956,0,-332.777	1/1:400:0,398:0:0:398:14161:-1273.52,-119.81,0	0/1:118:66,52:66:2364:52:1856:-131.798,0,-177.497	1/1:59:0,59:0:0:59:2112:-190.349,-17.7608,0	1/1:108:0,108:0:0:108:3853:-346.966,-32.5112,0	0/1:204:92,112:92:3285:112:4017:-300.174,0,-234.458	1/1:61:0,61:0:0:61:2150:-193.747,-18.3628,0	0/1:90:42,48:42:1508:48:1705:-126.324,0,-108.922	0/1:85:34,51:34:1220:51:1816:-138.114,0,-84.5193	1/1:31:0,31:0:0:31:1107:-99.9402,-9.33193,0	0/1:110:39,71:39:1404:71:2545:-195.744,0,-93.546	0/1:108:69,39:69:2457:39:1383:-92.254,0,-188.872	1/1:301:0,301:0:0:301:10706:-963.407,-90.61,0	1/1:128:0,128:0:0:128:4523:-407.233,-38.5318,0
chr05	1501912	.	C	T	296023	PASS	AB=0.485158;ABP=18.7379;AC=145;AF=0.771277;AN=188;AO=12149;CIGAR=1X;DP=16420;DPB=16420;DPRA=0;EPP=14317.1;EPPR=9130.23;GTI=2;LEN=1;MEANALT=1.04255;MQM=59.8517;MQMR=59.9984;NS=94;NUMALT=1;ODDS=1.51346;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=434507;QR=152614;RO=4267;RPL=1598;RPP=14329.9;RPPR=9130.23;RPR=10551;RUN=1;SAF=12147;SAP=26366.9;SAR=2;SRF=4267;SRP=9268.68;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:66:53,13:53:1908:13:462:-21.9907,0,-152.13	0/1:275:156,119:156:5584:119:4272:-301.874,0,-419.9	1/1:183:0,183:0:0:183:6549:-589.454,-55.0885,0	1/1:439:0,439:0:0:439:15692:-1411.84,-132.152,0	0/1:188:91,97:91:3259:97:3471:-255.816,0,-236.936	0/1:141:73,68:73:2611:68:2422:-175.715,0,-192.792	0/1:302:172,130:172:6163:130:4629:-325.86,0,-463.856	1/1:195:1,194:1:36:194:6911:-618.449,-55.1026,0	0/1:234:149,85:149:5326:85:3034:-202.848,0,-409.029	1/1:202:0,202:0:0:202:7219:-649.745,-60.8081,0	1/1:57:0,57:0:0:57:2048:-184.589,-17.1587,0	1/1:89:0,89:0:0:89:3187:-287.021,-26.7917,0	0/1:80:41,39:41:1476:39:1404:-102.577,0,-109.054	1/1:74:0,74:0:0:74:2651:-238.835,-22.2762,0	0/1:91:43,48:43:1548:48:1728:-128.409,0,-112.219	1/1:68:0,68:0:0:68:2448:-220.567,-20.47,0	1/1:78:0,78:0:0:78:2796:-251.869,-23.4803,0	1/1:46:0,46:0:0:46:1656:-149.079,-13.8474,0	1/1:54:0,54:0:0:54:1935:-174.409,-16.2556,0	0/1:486:227,258:227:8148:258:9231:-684.355,0,-586.973	0/1:352:161,191:161:5746:191:6819:-507.818,0,-411.294	0/1:227:161,65:161:5748:65:2328:-141.387,0,-449.046	0/1:218:113,105:113:4040:105:3745:-271.625,0,-298.164	1/1:207:16,191:16:576:191:6832:-562.76,-10.1382,0	1/1:137:0,137:0:0:137:4912:-442.225,-41.2411,0	1/1:595:0,595:0:0:595:21286:-1915.19,-179.113,0	0/1:474:242,232:242:8643:232:8321:-606.18,0,-635.178	1/1:43:0,43:0:0:43:1548:-139.613,-12.9443,0	0/1:557:233,323:233:8350:323:11575:-873.884,0,-583.771	0/1:177:98,79:98:3485:79:2818:-200.562,0,-260.579	0/1:411:160,250:160:5730:250:8953:-681.889,0,-392.033	0/1:37:17,20:17:612:20:720:-53.9907,0,-44.2753	1/1:25:0,25:0:0:25:894:-80.7801,-7.52575,0	1/1:4:0,4:0:0:4:133:-12.2976,-1.20412,0	1/1:24:0,24:0:0:24:864:-78.0822,-7.22472,0	0/1:40:17,23:17:608:23:794:-59.7321,0,-43.0108	1/1:250:1,249:1:36:249:8911:-798.336,-71.6592,0	1/1:288:2,286:2:72:286:10218:-912.625,-79.8599,0	1/1:89:0,89:0:0:89:3200:-288.202,-26.7917,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:181:1,180:1:36:180:6460:-577.881,-50.8882,0	0/1:57:31,26:31:1108:26:936:-67.3915,0,-82.8723	1/1:241:0,241:0:0:241:8628:-776.504,-72.5482,0	1/1:126:0,126:0:0:126:4505:-405.557,-37.9298,0	0/1:85:40,45:40:1432:45:1616:-120.142,0,-103.59	0/1:223:122,101:122:4376:101:3612:-258.157,0,-326.883	1/1:216:0,216:0:0:216:7740:-696.63,-65.0225,0	0/1:383:211,172:211:7514:172:6141:-437.484,0,-561.012	1/1:245:0,245:0:0:245:8748:-787.31,-73.7524,0	1/1:296:1,295:1:36:295:10541:-944.969,-85.5066,0	1/1:148:1,147:1:36:147:5245:-468.39,-40.9542,0	0/1:17:9,8:9:324:8:288:-21.1499,0,-24.3883	1/1:220:0,220:0:0:220:7860:-707.424,-66.2266,0	0/1:96:48,48:48:1711:48:1728:-126.904,0,-125.376	0/1:67:37,30:37:1323:30:1080:-77.3442,0,-99.2023	0/1:306:160,146:160:5703:146:5200:-376.008,0,-421.273	1/1:123:0,123:0:0:123:4412:-397.251,-37.0267,0	0/1:26:17,9:17:612:9:324:-21.6791,0,-47.5867	1/1:40:0,40:0:0:40:1421:-128.185,-12.0412,0	0/1:133:68,65:68:2448:65:2340:-170.816,0,-180.537	1/1:129:2,127:2:72:127:4524:-400.474,-31.9961,0	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	0/1:369:191,178:191:6794:178:6368:-461.749,0,-500.454	0/1:286:170,116:170:6092:116:4164:-288.842,0,-462.286	0/1:126:61,65:61:2192:65:2313:-170.474,0,-159.616	0/1:170:94,76:94:3364:76:2720:-193.86,0,-251.801	1/1:339:7,332:7:252:332:11849:-1043.24,-79.0202,0	1/1:214:2,212:2:68:212:7605:-678.007,-57.9627,0	1/1:34:0,34:0:0:34:1216:-109.741,-10.235,0	1/1:145:0,145:0:0:145:5195:-467.627,-43.6494,0	0/1:101:39,62:39:1396:62:2232:-170.733,0,-95.5351	1/1:36:0,36:0:0:36:1273:-114.871,-10.8371,0	1/1:166:0,166:0:0:166:5905:-531.545,-49.971,0	1/1:153:2,151:2:72:151:5381:-477.57,-39.2209,0	1/1:348:1,347:1:36:347:12394:-1111.41,-101.16,0	1/1:390:0,390:0:0:390:13974:-1257.42,-117.402,0	0/1:149:89,60:89:3180:60:2160:-149.811,0,-241.571	1/1:157:0,157:0:0:157:5612:-503.67,-47.2617,0	0/1:32:15,17:15:536:17:604:-45.0495,0,-38.9419	0/1:266:148,118:148:5291:118:4240:-301.699,0,-396.251	0/1:259:127,132:127:4510:132:4698:-344.207,0,-328.101	1/1:403:1,402:1:36:402:14387:-1290.78,-117.717,0	0/1:120:66,54:66:2348:54:1930:-137.852,0,-175.456	1/1:60:0,60:0:0:60:2156:-194.307,-18.0618,0	1/1:103:1,102:1:36:102:3632:-323.486,-27.4078,0	0/1:204:93,111:93:3344:111:3967:-295.673,0,-239.766	1/1:58:0,58:0:0:58:2058:-185.485,-17.4597,0	0/1:89:41,48:41:1459:48:1715:-127.526,0,-104.814	0/1:84:35,49:35:1256:49:1740:-131.579,0,-88.0588	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	0/1:108:39,69:39:1400:69:2469:-189.71,0,-93.7879	0/1:108:70,38:70:2516:38:1364:-90.5449,0,-194.18	1/1:295:0,295:0:0:295:10539:-948.38,-88.8039,0	1/1:128:0,128:0:0:128:4566:-411.099,-38.5318,0
chr05	1703637	.	TCAAGTA	ACAAGTG,ACAAGTA	159357	PASS	AB=0.509655,0.48273;ABP=5.98729,12.5354;AC=142,46;AF=0.755319,0.244681;AN=188;AO=5661,1795;CIGAR=1X5M1X,1X6M;DP=7521;DPB=7521.29;DPRA=0,1.01613;EPP=12295.7,3900.8;EPPR=5.18177;GTI=1;LEN=7,1;MEANALT=2.25532,2.57377;MQM=59.9,59.6429;MQMR=60;NS=94;NUMALT=2;ODDS=0.569076;PAIRED=0,0;PAIREDR=0;PAO=0.5,0;PQA=18,0;PQR=0;PRO=0;QA=201244,64008;QR=31;RO=1;RPL=0,0;RPP=12295.7,3900.8;RPPR=5.18177;RPR=5661,1795;RUN=1,1;SAF=0,0;SAP=12295.7,3900.8;SAR=5661,1795;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:74:0,40,34:0:0:40,34:1420,1215:-215.113,-99.4207,-87.3795,-116.048,0,-105.813	1/2:54:0,23,31:0:0:23,31:799,1116:-156.371,-91.4198,-84.4961,-65.3039,0,-55.9719	1/1:137:0,135,0:0:0:135,0:4768,0:-429.005,-40.6391,0,-429.005,-40.6391,-429.005	1/1:121:0,121,0:0:0:121,0:4310,0:-387.827,-36.4246,0,-387.827,-36.4246,-387.827	1/2:52:0,18,31:0:0:18,31:640,1112:-142.854,-90.6997,-85.2812,-52.1516,0,-42.8197	1/2:32:0,16,16:0:0:16,16:572,572:-93.6366,-46.9969,-42.1805,-46.9969,0,-42.1805	1/2:74:0,29,45:0:0:29,45:1017,1597:-213.229,-130.471,-121.741,-83.1099,0,-69.5636	1/1:123:0,122,0:0:0:122,0:4354,0:-391.675,-36.7257,0,-391.675,-36.7257,-391.675	1/2:93:0,51,40:0:0:51,40:1811,1431:-264.287,-116.724,-101.371,-147.597,0,-135.556	1/1:67:0,66,1:0:0:66,1:2355,36:-211.849,-19.868,0,-208.911,-16.5707,-208.61	1/1:52:0,50,0:0:0:50,0:1781,0:-160.28,-15.0515,0,-160.28,-15.0515,-160.28	1/1:98:0,96,1:0:0:96,1:3434,32:-308.971,-28.8989,0,-306.664,-26.5657,-306.363	1/2:87:0,55,31:0:0:55,31:1976,1108:-251.434,-90.3396,-73.7829,-161.092,0,-151.76	1/1:61:0,55,2:0:0:55,2:1964,53:-176.714,-16.5567,0,-173.091,-12.9674,-172.489	1/2:57:0,30,27:0:0:30,27:1072,959:-165.903,-78.4976,-69.4667,-87.7616,0,-79.6337	1/1:54:0,53,1:0:0:53,1:1896,29:-170.656,-15.9546,0,-168.62,-13.6564,-168.319	1/1:25:0,24,0:0:0:24,0:849,0:-76.3682,-7.22472,0,-76.3682,-7.22472,-76.3682	1/1:36:0,35,1:0:0:35,1:1241,32:-111.697,-10.5361,0,-109.391,-7.93797,-109.09	1/1:33:0,33,0:0:0:33,0:1157,0:-104.434,-9.93399,0,-104.434,-9.93399,-104.434	1/2:118:0,72,46:0:0:72,46:2541,1652:-342.026,-135.121,-113.447,-207.262,0,-193.415	1/2:145:0,75,69:0:0:75,69:2658,2476:-418.422,-201.963,-179.385,-216.456,0,-195.685	1/2:101:0,35,64:0:0:35,64:1252,2280:-287.927,-185.835,-175.299,-102.089,0,-82.8234	1/2:109:0,61,47:0:0:61,47:2158,1688:-313.612,-137.846,-119.483,-175.909,0,-161.76	1/2:29:0,23,6:0:0:23,6:828,216:-85.5449,-17.9843,-11.0606,-67.9204,0,-66.1142	1/1:104:0,101,0:0:0:101,0:3604,0:-324.238,-30.404,0,-324.238,-30.404,-324.238	1/1:187:0,184,1:0:0:184,1:6579,36:-591.783,-55.3895,0,-588.846,-52.4405,-588.545	1/2:207:0,114,93:0:0:114,93:4055,3348:-603.956,-273.54,-239.222,-330.774,0,-302.778	1/1:31:0,31,0:0:0:31,0:1104,0:-99.6706,-9.33193,0,-99.6706,-9.33193,-99.6706	1/2:249:0,107,141:0:0:107,141:3821,5037:-722.157,-410.639,-378.428,-311.565,0,-269.12	1/2:109:1,37,71:1:31:37,71:1320,2539:-311.887,-204.584,-195.934,-105.162,0,-86.2762	1/2:78:0,37,41:0:0:37,41:1289,1468:-224.892,-120.074,-108.936,-105.171,0,-92.8285	1/2:6:0,2,4:0:0:2,4:72,144:-17.9843,-12.1095,-11.5074,-6.23466,0,-5.03054	1/1:29:0,29,0:0:0:29,0:1021,0:-92.1969,-8.72987,0,-92.1969,-8.72987,-92.1969	1/2:5:0,2,3:0:0:2,3:72,108:-15.0469,-9.17208,-8.57002,-6.23466,0,-5.33157	1/1:9:0,9,0:0:0:9,0:320,0:-29.1424,-2.70927,0,-29.1424,-2.70927,-29.1424	1/2:6:0,1,5:0:0:1,5:36,176:-17.6186,-14.6799,-14.3788,-3.29724,0,-1.79209	1/1:192:0,192,0:0:0:192,0:6852,0:-616.741,-57.7978,0,-616.741,-57.7978,-616.741	1/1:202:0,200,1:0:0:200,1:7082,36:-636.987,-60.206,0,-634.049,-57.2684,-633.748	1/1:50:0,48,1:0:0:48,1:1708,32:-153.674,-14.4494,0,-151.367,-12.1762,-151.066	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:58:0,56,2:0:0:56,2:2004,72:-180.204,-16.8577,0,-174.329,-10.623,-173.727	1/2:21:0,13,8:0:0:13,8:431,288:-58.7032,-23.8592,-19.9458,-35.193,0,-32.7847	1/1:151:0,150,0:0:0:150,0:5324,0:-478.832,-45.1545,0,-478.832,-45.1545,-478.832	1/1:47:0,44,2:0:0:44,2:1572,54:-141.52,-13.2453,0,-137.808,-9.53375,-137.206	1/2:46:0,31,15:0:0:31,15:1074,540:-131.682,-44.4211,-35.0892,-87.616,0,-83.1006	1/2:121:0,76,45:0:0:76,45:2702,1616:-352.372,-132.184,-109.305,-220.546,0,-206.999	1/1:98:0,97,0:0:0:97,0:3456,0:-311,-29.1999,0,-311,-29.1999,-311	1/2:161:0,80,80:0:0:80,80:2838,2849:-463.575,-232.353,-208.271,-231.365,0,-207.282	1/1:105:0,105,0:0:0:105,0:3760,0:-338.6,-31.6082,0,-338.6,-31.6082,-338.6	1/1:87:0,86,0:0:0:86,0:3043,0:-273.809,-25.8886,0,-273.809,-25.8886,-273.809	1/1:100:0,97,0:0:0:97,0:3457,0:-310.997,-29.1999,0,-310.997,-29.1999,-310.997	1/2:5:0,4,1:0:0:4,1:144,36:-15.0469,-3.29724,-2.09312,-12.1095,0,-11.8085	1/1:134:0,134,0:0:0:134,0:4788,0:-431.062,-40.338,0,-431.062,-40.338,-431.062	1/2:36:0,18,18:0:0:18,18:648,644:-105.747,-52.8721,-47.4535,-53.2333,0,-47.8148	1/2:10:0,2,8:0:0:2,8:72,288:-29.734,-23.8592,-23.2571,-6.23466,0,-3.82642	1/2:126:0,71,54:0:0:71,54:2548,1940:-366.098,-158.261,-136.888,-207.836,0,-191.58	1/1:53:0,51,1:0:0:51,1:1836,29:-165.209,-15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chr05	1789364	.	CAGATTAA	GGGATAA,CGGATAA	233391	PASS	AB=0.68213,0.312608;ABP=4164.35,4408.28;AC=102,86;AF=0.542553,0.457447;AN=188;AO=10803,4591;CIGAR=2X2M1D3M,1M1X2M1D3M;DP=15479;DPB=13543.1;DPRA=0,11.8169;EPP=23461.4,9972.24;EPPR=0;GTI=10;LEN=7,7;MEANALT=2.7234,2.8;MQM=35.0001,48.0294;MQMR=0;NS=94;NUMALT=2;ODDS=12430.5;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=325037,160651;QR=0;RO=0;RPL=0,0;RPP=23461.4,9972.24;RPPR=0;RPR=10803,4591;RUN=1,1;SAF=0,0;SAP=23461.4,9972.24;SAR=10803,4591;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:32:0,18,14:0:0:18,14:557,504:-83.7211,-40.9596,-35.5411,-43.0918,0,-38.8774	1/2:255:0,201,53:0:0:201,53:6010,1838:-599.888,-147.6,-87.0934,-452.376,0,-436.421	1/2:198:0,106,87:0:0:106,87:3013,3059:-467.642,-245.824,-213.915,-221.847,0,-195.658	1/2:380:0,254,125:0:0:254,125:7451,4344:-904.72,-350.861,-274.399,-553.99,0,-516.361	1/2:52:0,38,14:0:0:38,14:1153,487:-126.851,-39.6981,-28.2589,-87.483,0,-83.2686	1/2:85:0,70,14:0:0:70,14:2090,501:-197.012,-40.2488,-19.1767,-156.753,0,-152.538	1/2:278:0,238,37:0:0:238,37:7415,1279:-668.096,-103.266,-31.6209,-564.861,0,-553.723	1/2:350:0,179,170:0:0:179,170:4861,5946:-828.05,-477.381,-423.497,-350.712,0,-299.537	1/2:101:0,72,29:0:0:72,29:2297,1018:-259.062,-82.2713,-60.5972,-177.126,0,-168.396	1/2:98:0,42,55:0:0:42,55:1141,1932:-238.141,-156.331,-143.688,-81.7798,0,-65.2232	1/2:78:0,49,29:0:0:49,29:1343,1018:-179.39,-82.8052,-68.0547,-96.8977,0,-88.1679	1/2:183:0,120,63:0:0:120,63:3561,2193:-443.478,-176.576,-140.452,-267.224,0,-248.26	1/2:163:0,141,21:0:0:141,21:4242,719:-377.264,-57.5543,-15.1091,-319.759,0,-313.438	1/2:129:0,85,44:0:0:85,44:2219,1546:-282.167,-125,-99.4128,-157.478,0,-144.232	1/2:78:0,26,52:0:0:26,52:777,1837:-207.182,-148.945,-141.118,-58.5417,0,-42.8882	1/2:78:0,34,43:0:0:34,43:1076,1503:-204.171,-121.201,-110.966,-83.0791,0,-70.1348	1/2:114:0,67,47:0:0:67,47:1880,1658:-270.75,-133.341,-113.172,-137.722,0,-123.573	1/2:98:0,67,30:0:0:67,30:2127,1052:-248.098,-84.3942,-64.2252,-163.694,0,-154.663	1/2:60:0,28,32:0:0:28,32:886,1108:-157.482,-89.1118,-80.683,-68.6923,0,-59.0593	1/2:305:0,226,78:0:0:226,78:7167,2732:-768.412,-220.443,-152.411,-547.944,0,-524.464	1/2:131:0,97,33:0:0:97,33:3238,1162:-347.455,-92.9962,-63.7963,-254.518,0,-244.584	1/2:135:0,117,18:0:0:117,18:3758,621:-340.291,-50.6597,-15.4392,-289.971,0,-284.553	1/2:127:0,95,32:0:0:95,32:3094,1137:-331.839,-92.5854,-63.9875,-239.597,0,-229.964	1/2:131:0,48,81:0:0:48,81:1283,2835:-320.467,-228.864,-214.415,-91.6239,0,-67.2405	1/2:127:0,80,46:0:0:80,46:2434,1614:-314.296,-130.294,-106.212,-184.115,0,-170.268	1/2:417:0,250,165:0:0:250,165:7243,5759:-1002.76,-465.352,-390.095,-537.421,0,-487.751	1/2:355:0,290,65:0:0:290,65:9451,2248:-913.806,-181.494,-94.1953,-732.65,0,-713.083	1/2:47:0,30,17:0:0:30,17:889,607:-115.258,-48.9565,-39.9256,-66.6268,0,-61.5093	1/2:358:0,302,56:0:0:302,56:9206,1972:-856.435,-160.148,-69.2365,-696.628,0,-679.771	1/2:125:0,83,42:0:0:83,42:2733,1473:-332.528,-119.101,-94.1157,-213.765,0,-201.122	1/2:199:0,162,37:0:0:162,37:4825,1321:-466.591,-107.053,-58.2859,-359.879,0,-348.74	1/2:14:0,12,2:0:0:12,2:404,72:-37.7987,-6.18746,-2.5751,-31.9642,0,-31.3621	1/2:21:0,17,4:0:0:17,4:469,134:-45.4945,-11.1197,-6.00224,-34.6936,0,-33.4895	1/1:16:0,16,0:0:0:16,0:527,0:-46.089,-4.81648,0,-46.089,-4.81648,-46.089	1/2:15:0,12,3:0:0:12,3:375,103:-37.5494,-8.61319,-5.00083,-29.2684,0,-28.3653	1/1:34:0,31,3:0:0:31,3:1014,105:-89.8152,-9.33193,0,-81.6122,-0.793128,-80.7091	1/2:354:0,215,137:0:0:215,137:5771,4792:-802.42,-388.694,-323.973,-413.734,0,-372.493	1/2:404:0,230,169:0:0:230,169:6015,5899:-901.581,-475.522,-406.285,-426.064,0,-375.19	1/2:81:0,49,32:0:0:49,32:1612,1119:-215.818,-90.1551,-75.4046,-125.997,0,-116.364	1/1:13:0,13,0:0:0:13,0:416,0:-36.5841,-3.91339,0,-36.5841,-3.91339,-36.5841	1/2:221:0,156,63:0:0:156,63:4842,2200:-547.323,-177.089,-130.128,-370.261,0,-351.296	1/2:72:0,53,19:0:0:53,19:1574,664:-171.702,-53.7206,-37.766,-118.31,0,-112.59	1/2:115:0,42,73:0:0:42,73:1276,2572:-304.058,-208.025,-195.381,-96.3439,0,-74.3687	1/2:69:0,36,33:0:0:36,33:1063,1179:-175.332,-95.8299,-84.9928,-79.8211,0,-69.8871	1/2:120:0,86,34:0:0:86,34:2594,1197:-292.727,-97.3865,-71.498,-195.673,0,-185.438	1/2:170:0,121,47:0:0:121,47:3845,1633:-427.856,-131.954,-95.5295,-295.974,0,-281.825	1/2:306:0,176,129:0:0:176,129:5586,4447:-786.508,-356.462,-303.481,-430.012,0,-391.179	1/1:533:0,487,41:0:0:487,41:16010,1434:-1388.63,-146.602,0,-1272.48,-30.3963,-1260.14	1/2:184:0,142,41:0:0:142,41:3877,1432:-395.819,-115.783,-73.0363,-280.168,0,-267.826	1/2:277:0,147,130:0:0:147,130:4134,4525:-667.945,-366.488,-322.236,-301.764,0,-262.63	1/2:316:0,233,82:0:0:233,82:6686,2889:-726.415,-234.639,-164.499,-491.924,0,-467.24	1/2:15:0,10,5:0:0:10,5:318,180:-39.2957,-14.9769,-11.9666,-24.6591,0,-23.1539	1/2:289:0,163,125:0:0:163,125:4646,4372:-692.481,-351.124,-302.056,-341.418,0,-303.789	1/2:64:0,50,14:0:0:50,14:1647,497:-168.661,-40.744,-25.6925,-128.263,0,-124.048	1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chr05	1789384	.	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chr05	1789386	.	T	C	22530.3	PASS	AB=0.273589;ABP=3197.72;AC=44;AF=0.234043;AN=188;AO=1986;CIGAR=1X;DP=15790;DPB=15790;DPRA=1.19331;EPP=3737.05;EPPR=27107.6;GTI=8;LEN=1;MEANALT=1.05357;MQM=42.7039;MQMR=38.8072;NS=94;NUMALT=1;ODDS=0.0142097;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70817;QR=492610;RO=13801;RPL=1917;RPP=3737.05;RPPR=27107.6;RPR=69;RUN=1;SAF=0;SAP=4315.55;SAR=1986;SRF=0;SRP=29971.5;SRR=13801;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:24,8:24:845:8:275:-14.4952,0,-61.1172	0/1:261:217,44:217:7755:44:1554:-58.6277,0,-518.872	0/0:208:208,0:208:7434:0:0:0,-62.6142,-594.267	0/0:387:386,1:386:13744:1:36:0,-112.996,-1081.49	0/1:53:38,15:38:1360:15:529:-31.0053,0,-88.3473	0/1:88:64,24:64:2285:24:864:-49.7764,0,-144.464	0/1:286:186,100:186:6574:100:3554:-223.754,0,-416.987	0/0:356:356,0:356:12723:0:0:0,-107.167,-999.646	0/1:103:75,28:75:2688:28:1004:-56.4789,0,-186.549	0/0:102:102,0:102:3625:0:0:0,-30.7051,-290.277	0/0:78:78,0:78:2804:0:0:0,-23.4803,-213.344	0/0:185:185,0:185:6614:0:0:0,-55.6905,-525.711	0/1:165:112,53:112:4024:53:1881:-116.476,0,-241.253	0/0:130:130,0:130:4649:0:0:0,-39.1339,-343.288	0/0:77:77,0:77:2764:0:0:0,-23.1793,-232.832	0/0:78:78,0:78:2804:0:0:0,-23.4803,-239.19	0/0:122:122,0:122:4373:0:0:0,-36.7257,-342.522	0/0:100:100,0:100:3588:0:0:0,-30.103,-297.902	0/0:61:61,0:61:2184:0:0:0,-18.3628,-186.038	0/1:303:200,103:200:7180:103:3678:-230.302,0,-473.928	0/1:132:90,42:90:3180:42:1478:-90.8212,0,-230.042	0/1:143:83,60:83:2949:60:2152:-145.324,0,-187.886	0/1:130:95,35:95:3374:35:1260:-71.0842,0,-239.847	0/0:133:133,0:133:4737:0:0:0,-40.037,-381.914	0/0:133:133,0:133:4734:0:0:0,-40.037,-385.412	0/0:421:417,4:417:14844:4:144:0,-113.774,-1164.43	0/1:364:282,82:282:10075:82:2931:-146.765,0,-714.646	0/0:49:49,0:49:1764:0:0:0,-14.7505,-138.651	0/1:366:255,111:255:9058:111:3977:-237.916,0,-568.819	0/1:129:81,48:81:2908:48:1728:-113.452,0,-206.775	0/1:207:159,48:159:5666:48:1694:-86.466,0,-352.874	0/1:14:10,4:10:360:4:144:-8.81331,0,-26.9389	0/0:22:22,0:22:788:0:0:0,-6.62266,-59.1125	0/1:17:12,5:12:432:5:180:-11.0791,0,-29.686	0/0:17:17,0:17:612:0:0:0,-5.11751,-50.1111	0/1:34:30,4:30:1061:4:140:-2.46509,0,-79.8493	0/0:355:355,0:355:12725:0:0:0,-106.866,-962.941	0/0:405:405,0:405:14452:0:0:0,-121.917,-1092.52	0/0:82:82,0:82:2925:0:0:0,-24.6845,-248.09	0/0:15:15,0:15:525:0:0:0,-4.51545,-44.2943	0/0:222:221,1:221:7928:1:36:0,-63.3076,-642.984	0/1:73:53,20:53:1889:20:720:-41.6343,0,-117.863	0/0:114:114,0:114:4084:0:0:0,-34.3174,-345.007	0/0:69:69,0:69:2476:0:0:0,-20.7711,-202.621	0/1:125:96,29:96:3444:29:1040:-53.9175,0,-229.69	0/1:174:135,39:135:4833:39:1370:-68.1245,0,-338.06	0/0:316:315,1:315:11179:1:36:0,-92.1447,-936.747	0/1:536:380,154:380:13504:154:5525:-320.358,0,-944.102	0/0:194:194,0:194:6930:0:0:0,-58.3998,-514.005	0/0:276:275,1:275:9820:1:36:0,-79.5816,-774.861	0/0:328:327,1:327:11675:1:36:0,-95.8351,-889.764	0/1:17:15,2:15:536:2:72:-1.53762,0,-39.3242	0/0:293:293,0:293:10446:0:0:0,-88.2018,-820.801	0/1:63:53,10:53:1904:10:345:-11.6301,0,-140.457	0/1:43:31,12:31:1104:12:432:-25.6794,0,-63.5749	0/1:203:137,66:137:4837:66:2349:-145.765,0,-309.866	0/0:55:55,0:55:1953:0:0:0,-16.5566,-156.047	0/1:19:9,10:9:324:10:356:-25.2755,0,-18.1764	0/0:58:53,5:53:1908:5:165:0,-4.12322,-148.377	0/1:102:77,25:77:2737:25:888:-47.4502,0,-177.989	0/0:232:232,0:232:8290:0:0:0,-69.839,-643.325	0/1:11:8,3:8:288:3:108:-6.49623,0,-18.1835	0/1:345:229,116:229:8104:116:4100:-255.423,0,-522.72	0/1:312:245,67:245:8777:67:2364:-113.627,0,-561.269	0/1:59:43,16:43:1540:16:557:-31.6826,0,-109.683	0/1:200:165,35:165:5901:35:1244:-48.6777,0,-402.415	0/0:237:237,0:237:8419:0:0:0,-71.3441,-651.074	0/1:117:65,52:65:2291:52:1864:-127.964,0,-159.015	0/0:49:49,0:49:1748:0:0:0,-14.7505,-136.686	0/0:186:186,0:186:6631:0:0:0,-55.9916,-504.227	0/1:207:158,49:158:5653:49:1745:-90.8289,0,-343.587	0/0:40:40,0:40:1401:0:0:0,-12.0412,-118.624	0/0:309:306,2:306:10934:2:72:0,-86.3247,-852.346	0/0:82:82,0:82:2928:0:0:0,-24.6845,-240.582	0/0:303:303,0:303:10865:0:0:0,-91.2121,-808.784	0/0:298:297,1:297:10522:1:36:0,-86.2042,-852.32	0/1:184:125,59:125:4473:59:2120:-131.887,0,-297.925	0/0:148:146,2:146:5217:2:72:0,-37.8625,-435.787	0/0:58:55,3:55:1972:3:108:0,-7.60092,-139.705	0/1:362:284,78:284:10155:78:2796:-137.405,0,-639.922	0/1:207:140,67:140:4975:67:2393:-148.823,0,-322.04	0/0:497:497,0:497:17742:0:0:0,-149.612,-1370.92	0/1:211:156,55:156:5566:55:1980:-108.885,0,-361.191	0/0:112:112,0:112:4024:0:0:0,-33.7154,-336.771	0/0:91:91,0:91:3272:0:0:0,-27.3937,-266.442	0/1:275:219,56:219:7838:56:2008:-92.6762,0,-526.204	0/0:57:57,0:57:2044:0:0:0,-17.1587,-176.645	0/1:152:113,39:113:4052:39:1400:-78.0027,0,-262.513	0/1:168:142,26:142:5072:26:905:-29.619,0,-346.114	0/0:70:69,1:69:2476:1:36:0,-18.0913,-192.079	0/1:146:102,44:102:3656:44:1580:-95.5331,0,-244.663	0/1:37:17,20:17:612:20:720:-52.2773,0,-43.2504	0/0:205:205,0:205:7341:0:0:0,-61.7111,-586.685	0/0:200:200,0:200:7134:0:0:0,-60.206,-557.266
chr05	1789403	.	C	T	53412.1	PASS	AB=0.306139;ABP=4804.52;AC=86;AF=0.457447;AN=188;AO=4579;CIGAR=1X;DP=15748;DPB=15748;DPRA=11.4295;EPP=9946.18;EPPR=24256.2;GTI=17;LEN=1;MEANALT=1;MQM=48.0214;MQMR=35.7582;NS=94;NUMALT=1;ODDS=0.790554;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160818;QR=399240;RO=11169;RPL=4579;RPP=9946.18;RPPR=24256.2;RPR=0;RUN=1;SAF=0;SAP=9946.18;SAR=4579;SRF=0;SRP=24256.2;SRR=11169;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:33:20,13:20:701:13:460:-31.3759,0,-46.9023	0/1:258:205,53:205:7356:53:1849:-86.9408,0,-481.849	0/1:208:116,92:116:4122:92:3238:-225.265,0,-241.617	0/1:387:261,126:261:9312:126:4457:-281.669,0,-573.884	0/1:52:39,13:39:1400:13:456:-25.4533,0,-91.6332	0/1:88:75,13:75:2681:13:453:-14.0505,0,-178.671	0/1:284:245,39:245:8776:39:1340:-34.3065,0,-607.994	0/1:361:189,172:189:6762:172:6054:-428.457,0,-359.152	0/1:99:72,27:72:2584:27:944:-54.5708,0,-178.201	0/1:102:45,57:45:1597:57:1986:-147.463,0,-78.2107	0/1:77:49,28:49:1764:28:1004:-67.0884,0,-96.997	0/1:185:122,63:122:4338:63:2217:-141.871,0,-271.587	0/1:166:145,21:145:5187:21:744:-16.1005,0,-346.498	0/1:129:84,45:84:2993:45:1585:-102.768,0,-158.595	0/1:80:28,52:28:1000:52:1810:-138.158,0,-50.8383	0/1:78:34,44:34:1216:44:1564:-116.168,0,-74.3784	0/1:119:74,45:74:2641:45:1593:-105.538,0,-153.049	0/1:99:68,31:68:2444:31:1096:-67.6961,0,-166.757	0/1:61:30,31:30:1057:31:1108:-80.1276,0,-67.9501	0/1:304:228,76:228:8169:76:2652:-146.121,0,-556.934	0/1:130:96,34:96:3444:34:1181:-65.5215,0,-252.623	0/1:140:124,16:124:4406:16:568:-9.17511,0,-314.735	0/1:128:98,30:98:3497:30:1053:-56.1634,0,-248.646	0/1:131:49,82:49:1760:82:2849:-214.742,0,-79.0633	0/1:134:86,48:86:3073:48:1678:-109.791,0,-196.541	0/1:421:259,162:259:9183:162:5670:-379.864,0,-550.453	0/1:367:301,66:301:10747:66:2328:-97.6455,0,-767.598	0/1:49:32,17:32:1144:17:597:-38.3515,0,-69.4266	0/1:366:310,56:310:11113:56:1950:-64.4301,0,-742.42	0/1:130:89,41:89:3196:41:1452:-90.6412,0,-229.487	0/1:205:168,37:168:6005:37:1297:-54.3549,0,-381.302	0/1:13:11,2:11:396:2:72:-2.87613,0,-30.3144	0/1:21:17,4:17:593:4:140:-6.53098,0,-35.9533	0/0:17:17,0:17:612:0:0:0,-5.11751,-50.6577	0/1:17:15,2:15:540:2:72:-1.62249,0,-38.6044	0/0:34:31,3:31:1112:3:108:0,-0.676872,-85.6775	0/1:356:218,138:218:7814:138:4795:-323.19,0,-419.741	0/1:402:232,170:232:8267:170:5945:-408.137,0,-426.334	0/1:82:50,32:50:1792:32:1136:-76.3971,0,-124.499	0/0:15:15,0:15:536:0:0:0,-4.51545,-44.1514	0/1:219:159,60:159:5693:60:2097:-120.721,0,-383.578	0/1:74:55,19:55:1956:19:642:-35.2352,0,-123.413	0/1:116:43,73:43:1540:73:2581:-195.67,0,-82.2862	0/1:69:36,33:36:1292:33:1169:-84.0894,0,-76.2672	0/1:125:90,35:90:3223:35:1248:-74.445,0,-207.916	0/1:175:131,44:131:4680:44:1548:-86.2063,0,-321.01	0/1:317:190,127:190:6779:127:4521:-305.798,0,-453.56	0/0:542:500,42:500:17912:42:1477:0,-30.746,-1351.25	0/1:195:154,41:154:5463:41:1441:-70.3162,0,-324.859	0/1:276:149,127:149:5332:127:4377:-309.37,0,-292.168	0/1:326:244,82:244:8703:82:2878:-160.341,0,-529.848	0/1:16:11,5:11:381:5:165:-10.3006,0,-25.5056	0/1:294:169,125:169:6046:125:4330:-295.652,0,-343.745	0/1:64:50,14:50:1777:14:496:-25.6033,0,-128.071	0/0:42:39,3:39:1389:3:108:0,-2.67913,-92.3883	0/1:197:164,33:164:5876:33:1165:-44.8489,0,-403.356	0/1:55:30,25:30:1072:25:868:-60.9284,0,-61.2333	0/0:18:18,0:18:644:0:0:0,-5.41854,-51.7363	0/1:57:48,9:48:1712:9:313:-11.1699,0,-125.565	0/1:102:72,30:72:2569:30:1056:-64.0301,0,-161.367	0/1:229:136,93:136:4854:93:3293:-225.09,0,-270.313	0/0:11:11,0:11:381:0:0:0,-3.31133,-30.1911	0/1:344:282,62:282:10120:62:2189:-92.7057,0,-695.78	0/1:313:240,73:240:8601:73:2554:-134.259,0,-542.468	0/1:56:33,23:33:1188:23:820:-56.6532,0,-78.4731	0/1:197:168,29:168:6017:29:1021:-32.5238,0,-411.109	0/1:234:146,88:146:5225:88:3064:-203.021,0,-296.309	0/1:120:77,43:77:2738:43:1525:-100.282,0,-194.538	0/1:48:33,15:33:1188:15:532:-32.4123,0,-73.213	0/1:183:129,54:129:4632:54:1852:-109.757,0,-271.965	0/1:208:165,43:165:5909:43:1534:-74.7164,0,-362.55	0/1:41:23,18:23:820:18:625:-43.6956,0,-53.8984	0/1:305:190,115:190:6801:115:4019:-266.072,0,-400.969	0/1:82:41,41:41:1472:41:1456:-104.101,0,-87.9998	0/1:297:193,104:193:6864:104:3664:-236.894,0,-369.355	0/1:297:207,90:207:7364:90:3043:-183.207,0,-486.251	0/1:185:159,26:159:5697:26:920:-26.536,0,-405.446	0/1:146:63,83:63:2264:83:2929:-216.54,0,-136.399	0/1:58:52,6:52:1860:6:208:-1.40925,0,-122.437	0/0:360:332,28:332:11887:28:988:0,-20.1153,-812.32	0/1:209:173,36:173:6178:36:1254:-48.9778,0,-427.736	0/1:498:344,154:344:12260:154:5473:-339.353,0,-736.493	0/1:213:160,53:160:5724:53:1892:-104.862,0,-371.177	0/1:112:73,39:73:2612:39:1384:-89.2257,0,-178.236	0/1:89:41,48:41:1451:48:1712:-125.779,0,-78.9142	0/1:274:237,37:237:8492:37:1308:-34.3624,0,-581.865	0/1:58:14,44:14:504:44:1576:-122.713,0,-22.5396	0/1:151:119,32:119:4252:32:1144:-55.7751,0,-280.137	0/1:168:133,35:133:4780:35:1236:-59.6517,0,-317.088	0/1:70:53,17:53:1904:17:596:-31.9591,0,-122.961	0/1:146:123,23:123:4403:23:824:-30.0162,0,-309.765	0/1:36:26,10:26:932:10:360:-21.3288,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chr05	1992654	.	A	T	94225.5	PASS	AB=0.498972;ABP=3.08621;AC=48;AF=0.255319;AN=188;AO=4154;CIGAR=1X;DP=17532;DPB=17532;DPRA=0.937141;EPP=9023.31;EPPR=29029.1;GTI=1;LEN=1;MEANALT=1.11864;MQM=59.9945;MQMR=59.9912;NS=94;NUMALT=1;ODDS=2.87848;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=148056;QR=473519;RO=13367;RPL=1947;RPP=38.3477;RPPR=3.06894;RPR=2207;RUN=1;SAF=1947;SAP=38.3477;SAR=2207;SRF=6674;SRP=3.06894;SRR=6693;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:129:61,68:61:2159:68:2432:-180.301,0,-155.744	0/1:188:101,87:101:3608:87:3120:-224.433,0,-268.333	0/0:292:291,1:291:10295:1:36:0,-84.3025,-922.887	0/0:410:410,0:410:14503:0:0:0,-123.422,-1305.04	0/1:207:102,105:102:3620:105:3745:-274.936,0,-263.691	0/1:76:42,33:42:1479:33:1176:-83.2108,0,-110.467	0/1:166:81,85:81:2858:85:3035:-223.408,0,-207.488	0/0:325:325,0:325:11500:0:0:0,-97.8347,-1034.89	0/1:185:94,91:94:3354:91:3216:-233.972,0,-246.386	0/0:199:198,0:198:6988:0:0:0,-59.6039,-628.779	0/0:112:112,0:112:3960:0:0:0,-33.7154,-356.593	0/0:181:181,0:181:6353:0:0:0,-54.4864,-571.87	0/1:140:65,75:65:2324:75:2670:-198.401,0,-167.276	0/0:134:133,1:133:4696:1:32:0,-37.1387,-419.606	0/0:122:122,0:122:4324:0:0:0,-36.7257,-389.338	0/0:134:134,0:134:4766:0:0:0,-40.338,-429.097	0/0:148:148,0:148:5267:0:0:0,-44.5524,-474.169	0/0:94:94,0:94:3334:0:0:0,-28.2968,-300.279	0/0:71:71,0:71:2496:0:0:0,-21.3731,-224.892	0/1:486:251,235:251:8933:235:8404:-610.063,0,-657.657	0/1:232:115,117:115:4048:117:4131:-302.139,0,-294.673	0/1:337:127,210:127:4484:210:7433:-567.57,0,-302.286	0/1:104:60,44:60:2140:44:1572:-110.464,0,-161.561	0/0:158:145,13:145:5154:13:468:0,-5.10309,-420.768	0/0:186:186,0:186:6601:0:0:0,-55.9916,-594.176	0/0:471:469,0:469:16629:0:0:0,-141.183,-1495.92	0/1:456:224,232:224:7956:232:8263:-606.412,0,-578.797	0/0:71:71,0:71:2519:0:0:0,-21.3731,-226.962	0/1:547:289,258:289:10274:258:9220:-665.108,0,-759.929	0/1:269:159,110:159:5658:110:3915:-271.567,0,-428.363	0/1:173:98,74:98:3471:74:2626:-184.448,0,-260.468	0/1:19:16,3:16:558:3:108:-4.3556,0,-44.8269	0/0:39:38,1:38:1346:1:36:0,-8.14189,-117.84	0/1:14:7,6:7:248:6:212:-15.1525,0,-18.3917	0/0:18:18,0:18:631:0:0:0,-5.41854,-57.1157	0/1:64:34,30:34:1220:30:1061:-76.5334,0,-90.8409	0/0:383:383,0:383:13542:0:0:0,-115.294,-1218.59	0/0:308:306,2:306:10835:2:72:0,-85.8805,-968.234	0/0:116:116,0:116:4110:0:0:0,-34.9195,-370.088	0/0:15:15,0:15:521:0:0:0,-4.51545,-47.2163	0/0:310:305,5:305:10814:5:180:0,-76.7672,-956.623	0/1:76:33,42:33:1159:42:1487:-111.187,0,-81.679	0/0:286:286,0:286:10134:0:0:0,-86.0946,-912.004	0/0:158:158,0:158:5591:0:0:0,-47.5627,-503.317	0/1:119:70,49:70:2473:49:1739:-120.97,0,-187.001	0/1:151:86,65:86:3041:65:2336:-165.043,0,-228.465	0/0:298:297,1:297:10549:1:36:0,-86.1087,-945.726	0/1:283:148,135:148:5271:135:4844:-350.921,0,-389.337	0/0:162:161,1:161:5699:1:36:0,-45.1686,-509.437	0/0:275:275,0:275:9706:0:0:0,-82.7832,-873.507	0/0:219:219,0:219:7758:0:0:0,-65.9256,-698.257	0/1:15:7,8:7:248:8:288:-21.752,0,-18.1487	0/0:314:314,0:314:11134:0:0:0,-94.5234,-1001.96	0/1:59:44,15:44:1560:15:536:-30.814,0,-122.931	0/1:24:10,14:10:356:14:495:-37.6583,0,-25.1565	0/1:235:130,105:130:4614:105:3727:-264.891,0,-344.685	0/0:71:71,0:71:2514:0:0:0,-21.3731,-226.512	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:34:15,19:15:536:19:671:-50.4739,0,-38.3398	0/1:87:45,42:45:1599:42:1504:-109.465,0,-118.01	0/0:219:217,2:217:7693:2:72:0,-59.0888,-685.576	0/1:15:3,12:3:108:12:432:-34.7057,0,-5.55972	0/1:497:220,277:220:7782:277:9877:-739.26,0,-550.805	0/1:385:201,184:201:7167:184:6577:-476.115,0,-529.193	0/1:158:80,78:80:2792:78:2769:-201.888,0,-203.96	0/1:174:90,84:90:3196:84:2985:-216.503,0,-235.486	0/0:296:296,0:296:10497:0:0:0,-89.1049,-944.653	0/1:197:53,144:53:1882:144:5159:-405.147,0,-110.354	0/1:49:25,24:25:900:24:847:-61.7983,0,-66.5705	0/0:101:101,0:101:3551:0:0:0,-30.404,-319.803	0/1:136:74,62:74:2590:62:2216:-158.765,0,-192.408	0/1:41:16,25:16:558:25:892:-68.2575,0,-38.2042	0/0:221:219,1:219:7777:1:32:0,-63.3672,-696.748	0/0:185:185,0:185:6552:0:0:0,-55.6905,-589.764	0/0:210:210,0:210:7420:0:0:0,-63.2163,-667.85	0/0:315:315,0:315:11174:0:0:0,-94.8244,-1005.56	0/1:312:163,149:163:5767:149:5328:-385.733,0,-425.229	0/0:232:232,0:232:8275:0:0:0,-69.839,-744.336	0/1:24:6,18:6:208:18:644:-51.0659,0,-11.8344	0/1:214:107,107:107:3785:107:3824:-279.937,0,-276.43	0/1:242:135,107:135:4815:107:3799:-269.259,0,-360.657	0/0:328:327,1:327:11526:1:36:0,-95.1396,-1033.63	0/1:155:75,80:75:2672:80:2825:-207.829,0,-194.067	0/0:145:145,0:145:5111:0:0:0,-43.6493,-460.136	0/0:181:181,0:181:6369:0:0:0,-54.4864,-573.31	0/1:277:137,139:137:4857:139:4976:-364.544,0,-353.837	0/1:65:38,27:38:1347:27:968:-67.8704,0,-101.963	0/1:152:73,78:73:2590:78:2791:-205.614,0,-187.533	0/0:152:152,0:152:5368:0:0:0,-45.7566,-483.258	0/0:92:92,0:92:3255:0:0:0,-27.6948,-293.171	0/1:142:66,76:66:2339:76:2695:-200.049,0,-168.023	0/1:143:50,93:50:1779:93:3306:-254.712,0,-117.345	0/0:273:273,0:273:9671:0:0:0,-82.1812,-870.35	0/0:235:234,0:234:8268:0:0:0,-70.441,-743.9
chr05	2038955	.	AGG	CGG,CGT	209665	PASS	AB=0.491847,0.504132;ABP=5.59502,3.6743;AC=140,48;AF=0.744681,0.255319;AN=188;AO=7476,2284;CIGAR=1X2M,1X1M1X;DP=9805;DPB=9805;DPRA=17.5609,0.917257;EPP=16132.9,4953.97;EPPR=27.4756;GTI=1;LEN=1,3;MEANALT=1.89247,2.30909;MQM=59.9972,59.662;MQMR=59.6667;NS=94;NUMALT=2;ODDS=0.767946;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=266155,80307;QR=436;RO=15;RPL=10,0;RPP=16150.2,4962.65;RPPR=27.4756;RPR=7466,2284;RUN=1,1;SAF=7474,2283;SAP=16219.6,4953.97;SAR=2,1;SRF=15;SRP=35.5824;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:62:0,45,17:0:0:45,17:1608,598:-180.141,-49.0307,-35.4844,-131.464,0,-126.346	1/2:122:0,55,67:0:0:55,67:1972,2307:-348.532,-187.686,-171.129,-161.198,0,-141.029	1/1:118:0,118,0:0:0:118,0:4211,0:-379.171,-35.5215,0,-379.171,-35.5215,-379.171	1/1:217:0,216,0:0:0:216,0:7710,0:-693.575,-65.0225,0,-693.575,-65.0225,-693.575	1/2:61:0,26,35:0:0:26,35:913,1222:-174.05,-99.7426,-91.9158,-74.6572,0,-64.1212	1/2:60:0,24,36:0:0:24,36:844,1276:-173.006,-104.304,-97.0797,-69.0542,0,-58.2171	1/2:206:0,106,100:0:0:106,100:3780,3492:-592.361,-284.223,-252.314,-308.49,0,-278.387	1/1:158:1,157,0:1:27:157,0:5559,0:-497.737,-44.863,0,-498.038,-47.2617,-500.166	1/2:168:0,86,81:0:0:86,81:3084,2847:-483.186,-231.642,-205.753,-251.539,0,-227.156	1/1:138:1,136,0:1:31:136,0:4842,0:-432.871,-38.4166,0,-433.172,-40.9401,-435.66	1/1:97:0,96,0:0:0:96,0:3407,0:-306.566,-28.8989,0,-306.566,-28.8989,-306.566	1/1:132:2,129,1:2:53:129,1:4572,36:-406.582,-34.7285,0,-404.247,-35.8638,-408.112	1/2:106:2,50,53:2:72:50,53:1779,1877:-291.429,-147.044,-137.868,-139.134,0,-129.055	1/1:98:0,98,0:0:0:98,0:3509,0:-316.02,-29.5009,0,-316.02,-29.5009,-316.02	1/1:65:0,65,0:0:0:65,0:2332,0:-210.14,-19.567,0,-210.14,-19.567,-210.14	1/1:101:0,101,0:0:0:101,0:3606,0:-324.746,-30.404,0,-324.746,-30.404,-324.746	1/1:88:0,87,0:0:0:87,0:3119,0:-280.684,-26.1896,0,-280.684,-26.1896,-280.684	1/1:70:0,70,0:0:0:70,0:2496,0:-224.893,-21.0721,0,-224.893,-21.0721,-224.893	1/1:61:0,61,0:0:0:61,0:2183,0:-196.735,-18.3628,0,-196.735,-18.3628,-196.735	1/2:240:0,126,112:0:0:126,112:4483,3984:-689.927,-324.571,-286.641,-365.362,0,-331.647	1/2:241:0,124,116:0:0:124,116:4416,4046:-688.975,-329.04,-291.713,-360.006,0,-325.086	1/2:109:0,26,83:0:0:26,83:899,2909:-310.107,-237.06,-229.233,-73.3936,0,-48.4081	1/2:124:0,72,52:0:0:72,52:2559,1824:-357.258,-148.725,-127.05,-208.886,0,-193.233	1/1:156:0,149,7:0:0:149,7:5332,234:-479.679,-44.8535,0,-460.736,-25.5752,-458.628	1/1:82:0,82,0:0:0:82,0:2911,0:-262.226,-24.6845,0,-262.226,-24.6845,-262.226	1/1:173:1,172,0:1:28:172,0:6115,0:-547.656,-49.2785,0,-547.957,-51.7772,-550.175	1/2:222:0,119,102:0:0:119,102:4235,3577:-636.212,-291.056,-255.234,-345.149,0,-314.444	1/1:51:0,51,0:0:0:51,0:1816,0:-163.721,-15.3525,0,-163.721,-15.3525,-163.721	1/2:267:0,143,124:0:0:143,124:5095,4354:-769.996,-354.703,-311.656,-415.646,0,-378.318	1/2:151:0,87,64:0:0:87,64:3124,2247:-438.068,-183.226,-157.036,-255.196,0,-235.93	1/2:151:0,83,67:0:0:83,67:2959,2373:-434.63,-193.426,-168.44,-241.327,0,-221.158	1/2:8:0,5,3:0:0:5,3:180,102:-23.3128,-8.61329,-7.10814,-15.0469,0,-14.1438	1/1:11:0,11,0:0:0:11,0:392,0:-35.6201,-3.31133,0,-35.6201,-3.31133,-35.6201	2/2:6:0,0,6:0:0:0,6:0,207:-18.9669,-18.9669,-18.9669,-1.80618,-1.80618,0	1/1:9:0,9,0:0:0:9,0:320,0:-29.1424,-2.70927,0,-29.1424,-2.70927,-29.1424	1/2:17:0,10,7:0:0:10,7:345,244:-48.1927,-20.1689,-17.1586,-28.3705,0,-26.2633	1/1:180:0,179,0:0:0:179,0:6412,0:-576.937,-53.8844,0,-576.937,-53.8844,-576.937	1/1:136:0,135,0:0:0:135,0:4782,0:-430.228,-40.6391,0,-430.228,-40.6391,-430.228	1/1:92:0,92,0:0:0:92,0:3300,0:-297.218,-27.6948,0,-297.218,-27.6948,-297.218	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:130:0,128,2:0:0:128,2:4530,63:-407.556,-38.5318,0,-402.491,-33.1507,-401.889	1/2:49:0,22,27:0:0:22,27:779,949:-141.051,-77.5948,-70.9722,-63.8094,0,-55.6816	1/1:150:0,147,2:0:0:147,2:5225,72:-470.057,-44.2514,0,-464.182,-38.3233,-463.58	1/1:98:0,98,0:0:0:98,0:3503,0:-315.48,-29.5009,0,-315.48,-29.5009,-315.48	1/2:91:0,38,53:0:0:38,53:1347,1838:-259.466,-149.727,-138.288,-110.09,0,-94.1357	1/2:104:1,49,54:1:36:49,54:1744,1927:-295.972,-154.136,-142.323,-139.197,0,-125.879	1/1:93:0,93,0:0:0:93,0:3332,0:-300.097,-27.9958,0,-300.097,-27.9958,-300.097	1/2:128:0,65,62:0:0:65,62:2316,2187:-366.918,-178.138,-158.571,-188.863,0,-170.199	1/1:109:0,109,0:0:0:109,0:3883,0:-349.666,-32.8123,0,-349.666,-32.8123,-349.666	1/1:96:0,93,1:0:0:93,1:3321,36:-298.76,-27.9958,0,-295.823,-25.0517,-295.522	1/1:195:2,193,0:2:44:193,0:6852,0:-612.574,-54.5211,0,-613.176,-58.0988,-616.532	1/2:11:0,3,8:0:0:3,8:104,286:-32.1275,-23.6772,-22.7742,-8.79971,0,-6.39147	1/1:120:0,120,0:0:0:120,0:4292,0:-386.458,-36.1236,0,-386.458,-36.1236,-386.458	1/2:47:0,28,19:0:0:28,19:1004,674:-137.157,-55.2658,-46.8369,-82.247,0,-76.5275	1/2:17:0,6,11:0:0:6,11:216,368:-47.763,-30.1295,-28.3233,-17.9843,0,-14.673	1/2:104:1,58,45:1:24:58,45:2061,1598:-296.104,-128.459,-112.856,-166.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chr05	2038966	.	T	G	37187.3	PASS	AB=0.495115;ABP=3.9226;AC=48;AF=0.255319;AN=188;AO=2203;CIGAR=1X;DP=9763;DPB=9763;DPRA=0.8764;EPP=4657.36;EPPR=15521.5;GTI=2;LEN=1;MEANALT=1.05556;MQM=59.754;MQMR=59.994;NS=94;NUMALT=1;ODDS=1.33051;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78490;QR=270437;RO=7549;RPL=14;RPP=4665.93;RPPR=15538.4;RPR=2189;RUN=1;SAF=2202;SAP=4778.08;SAR=1;SRF=7547;SRP=16378.1;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:46,15:46:1643:15:536:-30.212,0,-129.795	0/1:119:54,65:54:1932:65:2311:-172.409,0,-138.334	0/0:117:116,1:116:4159:1:36:0,-31.6222,-370.893	0/0:215:215,0:215:7689:0:0:0,-64.7214,-692.043	0/1:61:28,33:28:1008:33:1179:-88.0529,0,-72.6702	0/1:57:22,35:22:788:35:1240:-94.7454,0,-54.0861	0/1:205:107,98:107:3813:98:3485:-251.954,0,-281.656	0/0:159:158,0:158:5651:0:0:0,-47.5627,-508.35	0/1:166:86,80:86:3088:80:2846:-206.398,0,-228.176	0/0:139:139,0:139:4988:0:0:0,-41.8432,-449.064	0/0:99:99,0:99:3515:0:0:0,-29.802,-316.559	0/0:131:131,0:131:4680:0:0:0,-39.4349,-421.359	0/1:106:53,53:53:1904:53:1891:-138.555,0,-139.729	0/0:100:98,0:98:3511:0:0:0,-29.5009,-315.839	0/0:65:64,0:64:2300:0:0:0,-19.2659,-206.901	0/0:105:105,0:105:3772:0:0:0,-31.6081,-339.678	0/0:88:88,0:88:3160:0:0:0,-26.4906,-284.624	0/0:72:72,0:72:2588:0:0:0,-21.6742,-233.168	0/0:64:62,0:62:2228:0:0:0,-18.6639,-200.424	0/1:236:127,109:127:4564:109:3892:-279.05,0,-339.881	0/1:242:129,113:129:4607:113:4022:-289.23,0,-341.945	0/1:102:25,77:25:896:77:2730:-215.237,0,-50.2553	0/1:125:74,51:74:2660:51:1801:-124.721,0,-202.014	0/0:155:149,6:149:5325:6:203:0,-28.0594,-460.782	0/0:81:80,0:80:2868:0:0:0,-24.0824,-257.997	0/0:172:172,0:172:6184:0:0:0,-51.7772,-556.654	0/1:219:121,98:121:4312:98:3489:-248.289,0,-322.333	0/0:52:52,0:52:1857:0:0:0,-15.6536,-167.408	0/1:263:144,119:144:5168:119:4245:-303.052,0,-386.088	0/1:146:85,61:85:3048:61:2184:-152.876,0,-230.599	0/1:149:84,65:84:2994:65:2319:-164.115,0,-224.836	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:16:9,7:9:320:7:243:-17.3683,0,-24.3259	0/0:184:184,0:184:6597:0:0:0,-55.3895,-593.807	0/0:140:140,0:140:5020:0:0:0,-42.1442,-451.946	0/0:91:91,0:91:3272:0:0:0,-27.3937,-294.699	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:131:129,2:129:4628:2:72:0,-32.5982,-409.845	0/1:49:23,26:23:828:26:918:-68.1842,0,-60.0936	0/0:155:153,2:153:5484:2:72:0,-39.8229,-486.85	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.767	0/1:85:37,47:37:1320:47:1688:-126.554,0,-93.4557	0/1:101:51,50:51:1832:50:1775:-129.618,0,-134.757	0/0:96:96,0:96:3440:0:0:0,-28.8989,-309.813	0/1:126:65,61:65:2324:61:2188:-159.234,0,-171.49	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.553	0/0:98:97,1:97:3459:1:36:0,-25.9027,-307.925	0/0:199:199,0:199:7135:0:0:0,-59.905,-642.201	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/0:125:125,0:125:4477:0:0:0,-37.6287,-403.097	0/1:46:29,17:29:1040:17:608:-41.2028,0,-80.067	0/1:15:6,9:6:216:9:320:-24.6269,0,-15.2751	0/1:104:59,45:59:2116:45:1611:-113.968,0,-159.402	0/0:72:72,0:72:2580:0:0:0,-21.6742,-232.449	0/1:6:2,4:2:72:4:144:-11.5018,0,-5.03054	0/1:17:7,10:7:248:10:360:-27.6259,0,-17.5467	0/1:125:74,51:74:2656:51:1811:-125.641,0,-201.655	0/0:146:146,0:146:5243:0:0:0,-43.9504,-472.004	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/1:117:58,59:58:2084:59:2108:-154.762,0,-152.61	0/1:130:59,71:59:2124:71:2531:-188.891,0,-152.294	0/1:95:38,57:38:1368:57:2044:-155.631,0,-94.823	0/1:51:24,27:24:860:27:955:-70.91,0,-62.3693	0/0:150:146,4:146:5231:4:144:0,-31.8409,-457.613	0/1:63:22,41:22:784:41:1472:-113.808,0,-51.919	0/1:47:28,19:28:1000:19:671:-46.5658,0,-76.167	0/0:97:97,0:97:3471:0:0:0,-29.1999,-312.601	0/1:83:35,48:35:1260:48:1707:-128.929,0,-88.72	0/1:24:12,12:12:432:12:428:-31.6341,0,-31.9965	0/0:161:161,0:161:5742:0:0:0,-48.4658,-516.898	0/0:108:108,0:108:3888:0:0:0,-32.5112,-350.112	0/0:259:259,0:259:9283:0:0:0,-77.9668,-835.435	0/0:154:154,0:154:5532:0:0:0,-46.3586,-498	0/1:99:45,54:45:1607:54:1928:-143.993,0,-115.117	0/0:78:76,2:76:2732:2:72:0,-16.6436,-239.285	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:90:44,46:44:1571:46:1631:-119.967,0,-114.588	0/1:63:38,25:38:1364:25:882:-60.7315,0,-104.096	0/0:230:230,0:230:8238:0:0:0,-69.2369,-741.429	0/1:130:62,67:62:2205:67:2390:-176.116,0,-159.521	0/0:69:69,0:69:2461:0:0:0,-20.7711,-221.743	0/0:102:102,0:102:3641:0:0:0,-30.7051,-327.889	0/1:181:89,91:89:3177:91:3251:-238.251,0,-231.608	0/1:44:17,27:17:608:27:960:-73.471,0,-41.8067	0/0:104:103,0:103:3700:0:0:0,-31.0061,-332.881	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/0:82:82,0:82:2924:0:0:0,-24.6845,-263.393	0/1:114:63,51:63:2264:51:1819:-129.672,0,-169.705	0/1:87:23,64:23:815:64:2274:-178.664,0,-47.4812	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/0:124:124,0:124:4452:0:0:0,-37.3277,-400.849
chr05	2039027	.	C	T	193364	PASS	AB=0.467845;ABP=54.8189;AC=141;AF=0.75;AN=188;AO=9017;CIGAR=1X;DP=12105;DPB=12105;DPRA=0;EPP=19065.5;EPPR=6488.79;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9267;MQMR=60;NS=94;NUMALT=1;ODDS=0.321643;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=322206;QR=110433;RO=3086;RPL=8957;RPP=19065.5;RPPR=6488.79;RPR=60;RUN=1;SAF=0;SAP=19583.2;SAR=9017;SRF=0;SRP=6704.17;SRR=3086;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:64:43,21:43:1544:21:746:-48.1986,0,-119.987	0/1:205:102,103:102:3649:103:3684:-270.052,0,-266.901	1/1:153:0,153:0:0:153:5457:-491.257,-46.0576,0	1/1:270:3,266:3:104:266:9507:-845.878,-71.6308,0	0/1:85:38,47:38:1368:47:1676:-125.539,0,-97.8333	0/1:91:42,49:42:1481:49:1736:-129.119,0,-106.189	0/1:244:132,112:132:4693:112:3994:-286.192,0,-349.078	1/1:220:0,220:0:0:220:7854:-706.883,-66.2266,0	0/1:123:72,51:72:2561:51:1828:-127.774,0,-193.712	1/1:137:0,137:0:0:137:4900:-441.103,-41.2411,0	1/1:109:0,109:0:0:109:3916:-352.614,-32.8123,0	1/1:121:0,121:0:0:121:4332:-390.056,-36.4246,0	0/1:75:41,34:41:1476:34:1224:-87.8898,0,-110.559	1/1:135:0,135:0:0:135:4844:-436.113,-40.6391,0	1/1:63:0,63:0:0:63:2268:-204.382,-18.9649,0	1/1:111:0,111:0:0:111:3992:-359.468,-33.4143,0	1/1:93:0,93:0:0:93:3321:-299.104,-27.9958,0	1/1:70:0,70:0:0:70:2514:-226.511,-21.0721,0	1/1:69:1,68:1:36:68:2421:-214.546,-17.1728,0	0/1:307:185,122:185:6619:122:4346:-298.893,0,-503.373	0/1:251:135,116:135:4844:116:4135:-296.774,0,-360.554	0/1:137:102,35:102:3660:35:1241:-70.7505,0,-288.362	0/1:174:95,79:95:3400:79:2836:-203.091,0,-253.836	0/1:153:20,133:20:716:133:4750:-381.596,0,-18.7101	1/1:91:0,91:0:0:91:3237:-291.527,-27.3937,0	1/1:299:3,296:3:108:296:10540:-937.948,-79.9328,0	0/1:210:114,96:114:4100:96:3436:-246.232,0,-305.967	1/1:25:1,24:1:36:24:864:-74.4843,-3.92748,0	0/1:290:157,133:157:5617:133:4749:-340.269,0,-418.351	0/1:191:91,100:91:3251:100:3578:-264.643,0,-235.314	0/1:257:142,115:142:5088:115:4095:-291.37,0,-380.699	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	1/1:35:0,35:0:0:35:1248:-112.592,-10.5361,0	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/1:35:22,13:22:792:13:468:-31.9236,0,-61.0696	1/1:250:0,250:0:0:250:8972:-807.456,-75.2575,0	1/1:207:0,207:0:0:207:7396:-665.574,-62.3132,0	1/1:107:0,107:0:0:107:3838:-345.599,-32.2102,0	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	1/1:210:3,207:3:99:207:7398:-656.622,-53.9797,0	0/1:38:22,16:22:792:16:576:-40.7349,0,-60.1665	1/1:184:0,184:0:0:184:6539:-588.569,-55.3895,0	1/1:169:0,169:0:0:169:6071:-546.489,-50.8741,0	0/1:77:34,43:34:1220:43:1536:-115.349,0,-86.9275	0/1:114:57,57:57:2035:57:2010:-146.852,0,-149.104	1/1:106:0,106:0:0:106:3804:-342.557,-31.9092,0	0/1:192:99,92:99:3555:92:3293:-238.732,0,-262.3	1/1:136:0,136:0:0:136:4862:-437.732,-40.9401,0	1/1:166:0,166:0:0:166:5918:-532.727,-49.971,0	1/1:130:0,130:0:0:130:4660:-419.548,-39.1339,0	0/1:21:10,11:10:356:11:396:-29.6611,0,-26.0596	1/1:128:1,127:1:36:127:4545:-405.617,-34.9336,0	0/1:114:66,48:66:2364:48:1720:-120.768,0,-178.701	0/1:32:23,9:23:824:9:320:-19.5094,0,-64.8504	0/1:191:80,111:80:2855:111:3976:-300.534,0,-199.691	1/1:98:0,98:0:0:98:3507:-315.839,-29.5009,0	1/1:23:1,22:1:21:22:788:-69.1448,-4.82374,0	0/1:30:13,17:13:449:17:597:-45.0252,0,-31.7066	0/1:134:64,70:64:2288:70:2496:-184.35,0,-165.844	1/1:132:1,131:1:36:131:4654:-415.333,-36.1377,0	0/1:22:10,12:10:360:12:432:-32.5985,0,-26.1216	0/1:184:90,94:90:3228:94:3376:-248.665,0,-235.352	0/1:225:141,84:141:5056:84:2988:-201.418,0,-387.452	0/1:124:56,68:56:2000:68:2404:-179.286,0,-142.946	0/1:83:46,37:46:1648:37:1308:-93.0339,0,-123.623	1/1:264:3,261:3:108:261:9337:-830.217,-69.3968,0	0/1:76:53,23:53:1900:23:828:-51.9658,0,-148.4	0/1:52:30,22:30:1072:22:792:-55.9521,0,-81.1389	1/1:74:0,74:0:0:74:2613:-235.418,-22.2762,0	0/1:70:35,35:35:1256:35:1253:-91.9961,0,-92.2732	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	1/1:173:0,173:0:0:173:6173:-555.666,-52.0782,0	1/1:76:0,76:0:0:76:2708:-243.963,-22.8783,0	1/1:277:0,277:0:0:277:9870:-888.219,-83.3853,0	1/1:217:0,217:0:0:217:7713:-694.205,-65.3235,0	0/1:132:69,63:69:2451:63:2249:-162.935,0,-181.109	1/1:170:0,170:0:0:170:6057:-545.231,-51.1751,0	0/1:24:11,13:11:392:13:464:-34.8728,0,-28.3953	0/1:142:79,63:79:2840:63:2244:-159.476,0,-213.091	0/1:196:105,91:105:3755:91:3260:-234.61,0,-279.148	1/1:230:0,230:0:0:230:8228:-740.528,-69.2369,0	0/1:129:65,64:65:2336:64:2281:-166.419,0,-171.666	1/1:80:0,80:0:0:80:2860:-257.638,-24.0824,0	1/1:128:0,128:0:0:128:4586:-412.903,-38.5318,0	0/1:152:81,71:81:2900:71:2517:-180.912,0,-215.479	0/1:55:35,20:35:1260:20:720:-48.5721,0,-97.1488	1/1:147:0,147:0:0:147:5262:-473.686,-44.2514,0	1/1:106:0,106:0:0:106:3811:-343.185,-31.9092,0	1/1:106:0,106:0:0:106:3810:-343.096,-31.9092,0	0/1:153:84,69:84:2990:69:2484:-177.751,0,-223.274	0/1:82:59,23:59:2124:23:828:-50.1597,0,-166.744	1/1:102:0,102:0:0:102:3668:-330.322,-30.7051,0	1/1:116:0,116:0:0:116:4145:-373.232,-34.9195,0
chr05	2039035	.	T	C	187175	PASS	AB=0.46215;ABP=75.0089;AC=141;AF=0.75;AN=188;AO=8899;CIGAR=1X;DP=12033;DPB=12033;DPRA=0;EPP=19309.6;EPPR=6773.67;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.9393;MQMR=60;NS=94;NUMALT=1;ODDS=2.50248;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=317531;QR=112087;RO=3126;RPL=8897;RPP=19309.6;RPPR=6773.67;RPR=2;RUN=1;SAF=0;SAP=19326.9;SAR=8899;SRF=0;SRP=6791.03;SRR=3126;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:44,21:44:1580:21:747:-47.9874,0,-122.925	0/1:205:103,100:103:3662:100:3569:-259.948,0,-268.313	1/1:153:0,152:0:0:152:5436:-489.01,-45.7566,0	1/1:268:3,264:3:108:264:9440:-839.485,-70.6597,0	0/1:82:38,44:38:1353:44:1567:-116.636,0,-97.3839	0/1:91:42,49:42:1508:49:1749:-130.27,0,-108.621	0/1:245:133,112:133:4757:112:4008:-287.152,0,-354.534	1/1:217:0,217:0:0:217:7689:-692.047,-65.3235,0	0/1:124:74,50:74:2664:50:1777:-122.883,0,-202.677	1/1:136:0,135:0:0:135:4832:-434.625,-40.6391,0	1/1:103:0,103:0:0:103:3674:-330.846,-31.0061,0	1/1:116:0,115:0:0:115:4136:-372.062,-34.6185,0	0/1:75:42,33:42:1512:33:1184:-84.2911,0,-113.797	1/1:131:0,131:0:0:131:4667:-420.193,-39.4349,0	1/1:64:0,64:0:0:64:2296:-206.901,-19.2659,0	1/1:109:0,109:0:0:109:3878:-349.216,-32.8123,0	1/1:95:0,95:0:0:95:3399:-306.116,-28.5979,0	1/1:69:0,69:0:0:69:2454:-221.114,-20.7711,0	1/1:69:1,68:1:36:68:2392:-211.938,-17.1728,0	0/1:312:187,125:187:6690:125:4446:-306.384,0,-508.252	0/1:251:138,113:138:4944:113:4009:-285.441,0,-369.551	0/1:138:104,34:104:3736:34:1224:-68.9249,0,-294.897	0/1:177:96,81:96:3433:81:2912:-209.024,0,-255.899	0/1:152:20,132:20:716:132:4708:-378.12,0,-19.0112	1/1:89:0,89:0:0:89:3156:-284.135,-26.7917,0	1/1:293:3,290:3:108:290:10334:-919.628,-78.1266,0	0/1:213:116,97:116:4168:97:3433:-245.054,0,-311.182	1/1:22:1,21:1:36:21:752:-64.408,-3.02439,0	0/1:289:159,130:159:5716:130:4621:-329.055,0,-427.557	0/1:192:95,97:95:3401:97:3458:-253.526,0,-248.505	0/1:258:141,116:141:5064:116:4139:-294.968,0,-378.178	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	1/1:35:0,35:0:0:35:1252:-112.957,-10.5361,0	0/1:7:1,6:1:36:6:203:-16.494,0,-1.49106	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:35:22,13:22:792:13:464:-31.5615,0,-61.0696	1/1:246:0,246:0:0:246:8771:-789.38,-74.0534,0	1/1:202:0,202:0:0:202:7226:-650.395,-60.8081,0	1/1:108:0,108:0:0:108:3857:-347.309,-32.5112,0	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	1/1:205:4,201:4:144:201:7212:-635.814,-48.3975,0	0/1:38:22,16:22:788:16:568:-40.0118,0,-59.8057	1/1:181:0,181:0:0:181:6447:-580.289,-54.4864,0	1/1:170:0,170:0:0:170:6049:-544.515,-51.1751,0	0/1:77:34,43:34:1224:43:1519:-113.821,0,-87.2877	0/1:117:59,58:59:2105:58:2065:-150.899,0,-154.497	1/1:102:0,102:0:0:102:3660:-329.603,-30.7051,0	0/1:189:99,90:99:3552:90:3213:-232.497,0,-262.993	1/1:136:0,136:0:0:136:4834:-435.215,-40.9401,0	1/1:165:0,165:0:0:165:5882:-529.485,-49.67,0	1/1:134:0,134:0:0:134:4732:-426.035,-40.338,0	0/1:21:10,11:10:360:11:392:-29.2984,0,-26.4227	1/1:125:1,124:1:36:124:4452:-397.251,-34.0305,0	0/1:113:67,46:67:2408:46:1652:-114.952,0,-182.96	0/1:34:25,9:25:900:9:320:-18.9073,0,-71.086	0/1:188:81,107:81:2908:107:3828:-288.123,0,-205.361	1/1:97:0,97:0:0:97:3476:-313.049,-29.1999,0	1/1:23:1,22:1:36:22:792:-68.0074,-3.32542,0	0/1:27:13,14:13:468:14:491:-36.3933,0,-34.3318	0/1:139:65,74:65:2336:74:2646:-196.34,0,-168.656	1/1:127:0,127:0:0:127:4553:-409.927,-38.2308,0	0/1:22:10,12:10:360:12:428:-32.2361,0,-26.1216	0/1:188:94,94:94:3364:94:3352:-245.302,0,-246.383	0/1:226:141,85:141:5057:85:3032:-205.073,0,-387.239	0/1:125:56,69:56:1997:69:2464:-184.256,0,-142.373	0/1:79:46,33:46:1648:33:1179:-82.6365,0,-124.827	1/1:258:3,255:3:108:255:9077:-806.831,-67.5906,0	0/1:77:53,24:53:1908:24:864:-54.9033,0,-148.818	0/1:52:30,22:30:1080:22:784:-55.2304,0,-81.8597	1/1:72:0,72:0:0:72:2588:-233.168,-21.6742,0	0/1:70:36,34:36:1292:34:1221:-89.1179,0,-95.5117	0/1:15:9,6:9:320:6:212:-14.9093,0,-24.6269	1/1:172:0,171:0:0:171:6081:-547.034,-51.4761,0	1/1:77:0,77:0:0:77:2745:-247.29,-23.1793,0	1/1:275:0,275:0:0:275:9828:-884.435,-82.7833,0	1/1:215:0,215:0:0:215:7712:-694.111,-64.7215,0	0/1:127:68,59:68:2436:59:2109:-151.846,0,-181.264	1/1:165:0,165:0:0:165:5876:-528.948,-49.67,0	0/1:25:11,14:11:396:14:500:-37.8104,0,-28.457	0/1:145:81,64:81:2900:64:2304:-163.971,0,-217.586	0/1:198:106,92:106:3804:92:3304:-237.974,0,-282.953	1/1:226:0,226:0:0:226:8085:-727.668,-68.0328,0	0/1:128:65,63:65:2336:63:2251:-164.093,0,-171.967	1/1:78:0,78:0:0:78:2788:-251.161,-23.4803,0	1/1:125:0,125:0:0:125:4432:-399.053,-37.6288,0	0/1:149:82,67:82:2940:67:2370:-168.584,0,-219.98	0/1:55:35,20:35:1256:20:708:-47.4889,0,-96.7886	1/1:146:0,146:0:0:146:5225:-470.375,-43.9504,0	1/1:105:0,105:0:0:105:3752:-337.88,-31.6082,0	1/1:105:0,105:0:0:105:3724:-335.362,-31.6082,0	0/1:154:85,69:85:3048:69:2460:-175.292,0,-228.191	0/1:86:62,24:62:2228:24:860:-51.8333,0,-174.895	1/1:101:0,101:0:0:101:3602:-324.386,-30.404,0	1/1:115:0,115:0:0:115:4116:-370.625,-34.6185,0
chr05	2286114	.	TAGAG	TTGAG,TTGAA	515341	PASS	AB=0.481961,0.511131;ABP=28.7853,12.8232;AC=141,47;AF=0.75,0.25;AN=188;AO=14215,4679;CIGAR=1M1X3M,1M1X2M1X;DP=19022;DPB=19025.8;DPRA=0,0.930715;EPP=30870.5,10163.3;EPPR=37.7539;GTI=0;LEN=1,5;MEANALT=2.6383,3.18519;MQM=59.9719,59.71;MQMR=59.0625;NS=94;NUMALT=2;ODDS=9.79932;PAIRED=0,0;PAIREDR=0;PAO=6.33333,10.3333;PQA=215.333,283.333;PQR=215.333;PRO=6.33333;QA=505802,162453;QR=452;RO=16;RPL=6947,2139;RPP=18.7508,77.6363;RPPR=16.582;RPR=7268,2540;RUN=1,1;SAF=6947,2139;SAP=18.7508,77.6363;SAR=7268,2540;SRF=13;SRP=16.582;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:103:2,45,54:2:55:45,54:1608,1847:-276.117,-145.606,-136.401,-126.829,0,-114.914	1/2:394:0,216,175:0:0:216,175:7730,6057:-1122.54,-492.18,-427.158,-630.373,0,-577.693	1/2:406:1,211,191:1:24:211,191:7499,6615:-1146.48,-535.693,-474.034,-609.284,0,-553.646	1/1:423:0,423,0:0:0:423,0:15101,0:-1358.76,-127.336,0,-1358.76,-127.336,-1358.76	1/2:158:0,92,65:0:0:92,65:3287,2282:-453.691,-185.69,-157.995,-268.024,0,-248.457	1/2:147:1,63,83:1:27:63,83:2210,2931:-416.122,-236.588,-219.751,-177.788,0,-154.93	1/2:463:0,228,232:0:0:228,232:8118,8030:-1314.28,-652.628,-583.993,-661.734,0,-591.895	1/1:311:0,306,1:0:0:306,1:10901,36:-980.699,-92.1152,0,-977.762,-89.1603,-977.46	1/2:249:0,93,152:0:0:93,152:3336,5248:-698.459,-426.351,-398.355,-272.171,0,-226.414	1/1:195:1,193,0:1:36:193,0:6875,0:-614.842,-55.1614,0,-615.143,-58.0988,-618.081	1/1:191:0,187,0:0:0:187,0:6605,0:-594.197,-56.2926,0,-594.197,-56.2926,-594.197	1/1:167:0,167,0:0:0:167,0:5897,0:-530.818,-50.272,0,-530.818,-50.272,-530.818	1/2:140:0,77,61:0:0:77,61:2734,2116:-394.809,-172.035,-148.855,-222.827,0,-204.464	1/1:203:0,202,0:0:0:202,0:7136,0:-642.049,-60.8081,0,-642.049,-60.8081,-642.049	1/1:124:0,124,0:0:0:124,0:4393,0:-395.543,-37.3277,0,-395.543,-37.3277,-395.543	1/1:130:0,130,0:0:0:130,0:4586,0:-412.906,-39.1339,0,-412.906,-39.1339,-412.906	1/1:196:0,195,0:0:0:195,0:6921,0:-622.69,-58.7009,0,-622.69,-58.7009,-622.69	1/1:139:0,137,0:0:0:137,0:4896,0:-440.487,-41.2411,0,-440.487,-41.2411,-440.487	1/1:119:1,118,0:1:25:118,0:4179,0:-373.741,-33.3227,0,-374.042,-35.5215,-375.99	1/2:465:0,221,242:0:0:221,242:7922,8370:-1326.29,-680.17,-613.642,-646.174,0,-573.324	1/2:335:0,160,174:0:0:160,174:5688,6024:-953.13,-489.606,-441.442,-463.604,0,-411.225	1/2:164:0,52,111:0:0:52,111:1837,3860:-463.485,-313.881,-298.227,-149.664,0,-116.249	1/2:67:0,37,30:0:0:37,30:1324,1024:-191.403,-83.4274,-72.2893,-108.324,0,-99.2931	1/1:249:1,241,4:1:31:241,4:8609,144:-771.662,-70.0655,0,-760.213,-60.7886,-761.497	1/1:178:0,178,0:0:0:178,0:6379,0:-574.198,-53.5833,0,-574.198,-53.5833,-574.198	1/1:378:0,375,0:0:0:375,0:13312,0:-1197.65,-112.886,0,-1197.65,-112.886,-1197.65	1/2:420:0,208,212:0:0:208,212:7429,7315:-1200.27,-594.581,-531.967,-606.038,0,-542.22	1/1:74:0,74,0:0:0:74,0:2616,0:-235.687,-22.2762,0,-235.687,-22.2762,-235.687	1/2:560:0,284,274:0:0:284,274:10148,9578:-1606.63,-779.224,-693.732,-827.468,0,-744.986	1/2:265:0,131,132:0:0:131,132:4656,4583:-751.926,-372.509,-333.074,-379.408,0,-339.672	1/2:248:0,124,121:0:0:124,121:4416,4194:-700.774,-340.847,-303.519,-359.919,0,-323.494	1/2:16:0,6,10:0:0:6,10:212,358:-46.8163,-29.5526,-27.7465,-17.6186,0,-14.6083	1/1:40:0,36,1:0:0:36,1:1287,36:-115.773,-10.8371,0,-112.836,-7.89966,-112.535	1/2:16:0,8,8:0:0:8,8:288,287:-47.2682,-23.7682,-21.36,-23.8592,0,-21.4509	1/1:10:0,10,0:0:0:10,0:356,0:-32.3812,-3.0103,0,-32.3812,-3.0103,-32.3812	1/2:20:0,13,7:0:0:13,7:436,251:-56.1268,-20.8306,-16.9173,-35.6464,0,-33.5392	1/1:343:1,338,0:1:22:338,0:11960,0:-1073.99,-100.088,0,-1074.29,-101.748,-1075.97	1/1:256:0,253,1:0:0:253,1:9060,35:-815.091,-76.1606,0,-812.243,-73.2779,-811.942	1/1:165:0,161,2:0:0:161,2:5687,65:-511.604,-48.4658,0,-506.358,-43.2372,-505.756	1/1:6:0,6,0:0:0:6,0:212,0:-19.4248,-1.80618,0,-19.4248,-1.80618,-19.4248	1/1:332:0,326,6:0:0:326,6:11624,198:-1045.68,-98.1358,0,-1029.68,-81.8416,-1027.87	1/2:78:0,38,39:0:0:38,39:1351,1361:-220.78,-110.682,-99.2426,-110.091,0,-98.3512	1/1:276:1,273,0:1:36:273,0:9713,0:-870.589,-79.2122,0,-870.89,-82.1812,-873.828	1/1:117:0,117,0:0:0:117,0:4140,0:-372.786,-35.2205,0,-372.786,-35.2205,-372.786	1/1:117:0,117,0:0:0:117,0:4168,0:-375.3,-35.2205,0,-375.3,-35.2205,-375.3	1/2:164:0,82,81:0:0:82,81:2936,2817:-468.533,-229.095,-204.411,-239.519,0,-215.135	1/1:241:0,241,0:0:0:241,0:8587,0:-772.628,-72.5482,0,-772.628,-72.5482,-772.628	1/2:260:0,124,134:0:0:124,134:4435,4683:-742.634,-380.993,-343.665,-361.698,0,-321.36	1/1:251:0,249,0:0:0:249,0:8857,0:-796.856,-74.9565,0,-796.856,-74.9565,-796.856	1/1:248:0,248,0:0:0:248,0:8842,0:-795.762,-74.6554,0,-795.762,-74.6554,-795.762	1/1:344:0,344,0:0:0:344,0:12269,0:-1104.05,-103.554,0,-1104.05,-103.554,-1104.05	1/2:21:0,14,7:0:0:14,7:504,249:-61.7751,-20.6484,-16.434,-41.4837,0,-39.3765	1/1:363:0,361,0:0:0:361,0:12859,0:-1156.8,-108.672,0,-1156.8,-108.672,-1156.8	1/2:84:0,40,44:0:0:40,44:1432,1517:-240.271,-123.486,-111.445,-117.136,0,-103.891	1/2:35:0,19,1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chr05	2307027	.	G	A	92014.5	PASS	AB=0.569535;ABP=291.409;AC=48;AF=0.255319;AN=188;AO=3933;CIGAR=1X;DP=13209;DPB=13209;DPRA=1.21311;EPP=8543.41;EPPR=20104.3;GTI=3;LEN=1;MEANALT=1.01695;MQM=59.6809;MQMR=59.4632;NS=94;NUMALT=1;ODDS=0.475368;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=140393;QR=328111;RO=9273;RPL=1701;RPP=158.685;RPPR=357.865;RPR=2232;RUN=1;SAF=1701;SAP=158.685;SAR=2232;SRF=4021;SRP=357.865;SRR=5252;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:93:39,54:39:1368:54:1936:-146.393,0,-95.1232	0/1:122:45,77:45:1576:77:2755:-211.449,0,-105.382	0/1:246:124,122:124:4440:122:4362:-318.6,0,-325.717	0/0:343:338,4:338:11964:4:144:0,-89.9659,-1061.53	0/1:54:14,40:14:496:40:1440:-113.642,0,-28.7186	0/1:57:22,35:22:784:35:1232:-94.0137,0,-53.7206	0/1:185:90,95:90:3185:95:3380:-248.704,0,-231.146	0/0:222:222,0:222:7812:0:0:0,-66.8287,-702.937	0/1:184:94,90:94:3346:90:3219:-234.364,0,-245.878	0/0:127:127,0:127:4468:0:0:0,-38.2308,-402.238	0/0:63:63,0:63:2252:0:0:0,-18.9649,-201.672	0/0:130:129,1:129:4513:1:32:0,-35.9346,-403.136	0/1:99:49,50:49:1714:50:1783:-130.26,0,-124.562	0/0:84:84,0:84:2945:0:0:0,-25.2865,-265.229	0/0:138:138,0:138:4885:0:0:0,-41.5421,-439.107	0/0:71:71,0:71:2506:0:0:0,-21.3731,-225.736	0/0:59:59,0:59:2074:0:0:0,-17.7608,-186.91	0/0:49:49,0:49:1719:0:0:0,-14.7505,-153.112	0/0:66:66,0:66:2340:0:0:0,-19.868,-210.788	0/1:242:114,128:114:4078:128:4549:-336.681,0,-294.356	0/1:286:99,187:99:3545:187:6687:-515.667,0,-233.075	0/1:173:55,118:55:1976:118:4204:-326.454,0,-125.057	0/1:194:95,99:95:3370:99:3519:-258.478,0,-245.055	0/1:110:96,14:96:3371:14:500:-12.2229,0,-270.317	0/0:98:98,0:98:3440:0:0:0,-29.5009,-309.693	0/0:306:306,0:306:10846:0:0:0,-92.1152,-975.732	0/1:315:148,167:148:5286:167:5966:-442.13,0,-379.838	0/0:46:46,0:46:1636:0:0:0,-13.8474,-146.737	0/1:468:244,224:244:8645:224:8006:-579.584,0,-636.863	0/1:218:91,127:91:3219:127:4547:-343.715,0,-224.296	0/1:180:71,109:71:2535:109:3904:-297.341,0,-174.153	0/1:18:10,8:10:345:8:288:-20.8489,0,-25.9623	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0178	0/1:15:12,3:12:424:3:104:-5.18736,0,-33.981	0/0:4:4,0:4:135:0:0:0,-1.20412,-12.4825	0/1:27:10,17:10:352:17:608:-46.9242,0,-23.89	0/0:246:246,0:246:8670:0:0:0,-74.0534,-779.749	0/0:134:134,0:134:4786:0:0:0,-40.338,-429.976	0/0:70:69,1:69:2443:1:36:0,-17.4738,-216.376	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:201:200,1:200:7089:1:36:0,-56.9088,-634.414	0/1:56:30,26:30:1068:26:932:-67.3412,0,-79.5744	0/0:194:194,0:194:6875:0:0:0,-58.3998,-618.735	0/0:98:97,0:97:3429:0:0:0,-29.1999,-308.35	0/0:94:94,0:94:3332:0:0:0,-28.2968,-300.098	0/1:181:66,115:66:2356:115:4113:-315.827,0,-157.804	0/0:158:158,0:158:5596:0:0:0,-47.5627,-503.358	0/1:292:99,193:99:3503:193:6863:-529.804,0,-227.555	0/0:135:135,0:135:4757:0:0:0,-40.639,-428.106	0/0:182:182,0:182:6452:0:0:0,-54.7875,-580.322	0/0:190:187,3:187:6676:3:108:0,-47.1218,-590.327	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/0:163:163,0:163:5760:0:0:0,-49.0679,-518.361	0/1:98:46,52:46:1635:52:1872:-139.258,0,-117.929	0/1:22:12,10:12:419:10:356:-25.7586,0,-31.42	0/1:214:78,136:78:2754:136:4841:-371.422,0,-183.661	0/0:56:55,1:55:1925:1:36:0,-13.2594,-169.907	0/1:26:9,17:9:320:17:612:-47.582,0,-21.3156	0/1:24:10,14:10:360:14:496:-37.7486,0,-25.5113	0/1:100:40,60:40:1421:60:2152:-163.844,0,-98.0256	0/1:117:57,60:57:2001:60:2152:-158.674,0,-144.513	0/1:17:9,8:9:311:8:288:-21.1499,0,-23.2062	0/1:307:114,193:114:4039:193:6888:-526.103,0,-271.222	0/1:238:83,155:83:2931:155:5535:-426.327,0,-192.357	0/1:155:69,86:69:2433:86:3092:-231.819,0,-172.449	0/1:121:41,80:41:1438:80:2844:-219.755,0,-93.2889	0/0:226:224,2:224:7943:2:72:0,-61.1961,-707.982	0/1:248:66,182:66:2360:182:6536:-513.563,0,-137.999	0/1:58:30,28:30:1052:28:1004:-73.1877,0,-77.5307	0/0:127:127,0:127:4504:0:0:0,-38.2308,-405.482	0/1:66:23,43:23:820:43:1518:-117.034,0,-54.2545	0/1:45:28,17:28:1004:17:612:-41.8625,0,-77.1295	0/0:144:144,0:144:5095:0:0:0,-43.3483,-458.384	0/0:177:177,0:177:6240:0:0:0,-53.2823,-560.628	0/0:266:265,0:265:9397:0:0:0,-79.7729,-844.443	0/0:225:224,1:224:7958:1:36:0,-64.1335,-711.964	0/1:134:51,83:51:1807:83:2949:-225.299,0,-122.526	0/0:113:113,0:113:4037:0:0:0,-34.0164,-363.424	0/1:25:9,16:9:309:16:576:-44.6492,0,-20.615	0/0:134:129,5:129:4563:5:180:0,-23.786,-394.138	0/1:222:82,140:82:2861:140:4942:-377.891,0,-190.85	0/0:322:320,2:320:11388:2:72:0,-90.0949,-1017.69	0/1:332:171,161:171:5999:161:5725:-415.344,0,-439.271	0/0:107:106,1:106:3713:1:36:0,-28.6314,-330.792	0/0:87:87,0:87:3055:0:0:0,-26.1896,-274.536	0/1:198:93,105:93:3238:105:3739:-277.089,0,-231.257	0/1:35:18,17:18:631:17:603:-44.0635,0,-46.5346	0/0:92:92,0:92:3234:0:0:0,-27.6948,-291.282	0/0:97:97,0:97:3410:0:0:0,-29.1999,-307.117	0/0:69:69,0:69:2410:0:0:0,-20.7711,-217.112	0/1:116:55,61:55:1950:61:2180:-161.518,0,-140.855	0/1:121:39,82:39:1383:82:2944:-228.751,0,-88.3434	0/0:234:234,0:234:8308:0:0:0,-70.441,-722.276	0/0:179:179,0:179:6289:0:0:0,-53.8844,-565.642
chr05	2307034	.	A	G	242222	PASS	AB=0.430746;ABP=284.826;AC=140;AF=0.744681;AN=188;AO=9148;CIGAR=1X;DP=13021;DPB=13021;DPRA=0;EPP=19850.3;EPPR=8408.78;GTI=3;LEN=1;MEANALT=1.02128;MQM=59.6372;MQMR=59.7006;NS=94;NUMALT=1;ODDS=0.176502;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=324952;QR=138431;RO=3871;RPL=3871;RPP=472.254;RPPR=183.352;RPR=5277;RUN=1;SAF=3869;SAP=474.928;SAR=5279;SRF=1652;SRP=183.352;SRR=2219;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:92:54,38:54:1923:38:1333:-92.386,0,-145.529	0/1:117:75,42:75:2691:42:1491:-99.2537,0,-207.196	0/1:244:123,121:123:4400:121:4344:-317.682,0,-322.579	1/1:331:4,327:4:144:327:11650:-1034.84,-86.3273,0	0/1:53:38,15:38:1351:15:516:-30.8088,0,-105.935	0/1:57:35,22:35:1252:22:770:-52.46,0,-95.7689	0/1:180:91,89:91:3243:89:3175:-231.754,0,-237.883	1/1:215:0,215:0:0:215:7567:-680.939,-64.7215,0	0/1:179:88,91:88:3156:91:3239:-237.758,0,-230.201	1/1:120:0,119:0:0:119:4206:-378.325,-35.8226,0	1/1:61:0,61:0:0:61:2156:-194.288,-18.3628,0	1/1:129:1,128:1:36:128:4575:-408.312,-35.2346,0	0/1:99:50,49:50:1796:49:1735:-126.452,0,-131.431	1/1:86:0,86:0:0:86:3036:-273.412,-25.8886,0	1/1:147:0,147:0:0:147:5207:-468.679,-44.2514,0	1/1:68:0,68:0:0:68:2431:-219.013,-20.47,0	1/1:58:1,57:1:36:57:2036:-179.903,-13.8615,0	1/1:46:0,46:0:0:46:1631:-147.076,-13.8474,0	1/1:66:0,66:0:0:66:2372:-213.663,-19.868,0	0/1:246:130,116:130:4634:116:4155:-300.079,0,-343.129	0/1:277:179,98:179:6412:98:3479:-229.853,0,-493.657	0/1:174:119,55:119:4260:55:1959:-123.595,0,-331.173	0/1:194:100,94:100:3571:94:3347:-242.978,0,-263.156	0/1:110:14,96:14:496:96:3394:-272.393,0,-11.861	1/1:97:0,97:0:0:97:3476:-312.933,-29.1999,0	1/1:306:0,306:0:0:306:10887:-979.427,-92.1152,0	0/1:315:165,150:165:5891:150:5298:-382.041,0,-435.381	1/1:45:0,45:0:0:45:1612:-145.356,-13.5464,0	0/1:460:223,237:223:8000:237:8450:-621.891,0,-581.473	0/1:214:125,89:125:4475:89:3136:-218.01,0,-338.442	0/1:179:107,72:107:3792:72:2567:-177.346,0,-287.568	0/1:17:8,9:8:288:9:320:-24.0248,0,-21.1499	1/1:10:0,10:0:0:10:351:-31.9263,-3.0103,0	0/1:12:2,10:2:72:10:360:-29.1319,0,-3.22436	1/1:4:0,4:0:0:4:135:-12.4825,-1.20412,0	0/1:25:16,9:16:572:9:315:-21.1611,0,-44.2877	1/1:245:0,245:0:0:245:8648:-778.267,-73.7524,0	1/1:128:0,128:0:0:128:4558:-410.257,-38.5318,0	1/1:72:0,72:0:0:72:2545:-229.26,-21.6742,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:198:1,197:1:36:197:7046:-630.534,-56.0057,0	0/1:55:26,29:26:932:29:1044:-77.7182,0,-67.6422	1/1:196:0,196:0:0:196:6973:-627.578,-59.0019,0	1/1:98:0,98:0:0:98:3491:-314.35,-29.5009,0	1/1:91:0,91:0:0:91:3204:-288.582,-27.3937,0	0/1:176:111,65:111:3980:65:2315:-155.62,0,-305.328	1/1:158:0,158:0:0:158:5650:-508.213,-47.5627,0	0/1:287:186,101:186:6645:101:3608:-238.506,0,-511.715	1/1:135:0,135:0:0:135:4786:-430.343,-40.6391,0	1/1:181:0,181:0:0:181:6438:-579.342,-54.4864,0	1/1:188:0,188:0:0:188:6682:-601.366,-56.5936,0	0/1:13:7,6:7:252:6:212:-15.5114,0,-19.1156	1/1:165:0,165:0:0:165:5855:-526.924,-49.67,0	0/1:96:51,45:51:1828:45:1601:-115.478,0,-135.902	0/1:23:10,13:10:360:13:451:-33.9901,0,-25.8206	0/1:209:135,74:135:4823:74:2643:-175.156,0,-371.31	1/1:57:1,56:1:36:56:1982:-175.037,-13.5604,0	0/1:26:21,5:21:756:5:180:-8.72528,0,-60.5358	0/1:24:14,10:14:504:10:351:-24.6937,0,-38.4725	0/1:96:57,39:57:2027:39:1387:-96.1725,0,-153.803	0/1:115:58,57:58:2080:57:2013:-146.819,0,-152.799	0/1:17:8,9:8:288:9:324:-24.3883,0,-21.1499	0/1:303:191,112:191:6825:112:3978:-266.992,0,-523.099	0/1:229:145,83:145:5175:83:2925:-194.476,0,-396.581	0/1:153:87,66:87:3108:66:2367:-167.136,0,-233.848	0/1:122:79,43:79:2819:43:1531:-101.338,0,-217.223	1/1:231:2,229:2:72:229:8095:-721.673,-62.7012,0	0/1:243:178,65:178:6369:65:2316:-135.546,0,-500.044	0/1:57:27,30:27:956:30:1076:-79.9941,0,-69.197	1/1:124:0,124:0:0:124:4385:-394.773,-37.3277,0	0/1:67:43,24:43:1544:24:851:-56.7404,0,-119.066	0/1:45:17,28:17:608:28:999:-76.6782,0,-41.501	1/1:141:2,139:2:72:139:4921:-435.817,-35.6085,0	1/1:176:0,176:0:0:176:6282:-565.345,-52.9813,0	1/1:266:1,265:1:36:265:9416:-843.722,-76.4757,0	1/1:222:1,221:1:36:221:7881:-705.658,-63.2304,0	0/1:134:85,49:85:3056:49:1748:-117.22,0,-234.885	1/1:114:0,114:0:0:114:4038:-363.471,-34.3174,0	0/1:25:16,9:16:572:9:320:-21.6166,0,-44.2877	1/1:137:5,132:5:171:132:4686:-405.985,-25.5157,0	0/1:212:135,77:135:4827:77:2720:-181.213,0,-370.535	1/1:322:2,320:2:72:320:11409:-1019.52,-90.0949,0	0/1:332:161,171:161:5767:171:6046:-444.124,0,-419.107	1/1:105:0,105:0:0:105:3753:-337.949,-31.6082,0	1/1:88:0,88:0:0:88:3085:-277.861,-26.4906,0	0/1:193:102,91:102:3628:91:3214:-231.375,0,-268.607	0/1:31:15,16:15:540:16:572:-42.4364,0,-39.6046	1/1:91:0,91:0:0:91:3241:-291.91,-27.3937,0	1/1:99:0,99:0:0:99:3522:-317.189,-29.802,0	1/1:69:0,69:0:0:69:2402:-216.426,-20.7711,0	0/1:118:61,57:61:2192:57:2007:-145.379,0,-161.995	0/1:120:82,38:82:2948:38:1356:-86.2169,0,-229.412	1/1:189:0,189:0:0:189:6703:-603.301,-56.8947,0	1/1:175:0,175:0:0:175:6193:-557.374,-52.6803,0
chr05	3032154	.	AGAG	AGAA	155272	PASS	AB=0.484932;ABP=11.5828;AC=142;AF=0.755319;AN=188;AO=7195;CIGAR=3M1X;DP=9473;DPB=9473;DPRA=0;EPP=14999.1;EPPR=4625.21;GTI=1;LEN=1;MEANALT=1.30851;MQM=59.9911;MQMR=59.9955;NS=94;NUMALT=1;ODDS=4.75573;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=256365;QR=78395;RO=2247;RPL=7122;RPP=14999.1;RPPR=4625.21;RPR=73;RUN=1;SAF=0;SAP=15626.8;SAR=7195;SRF=0;SRP=4882.31;SRR=2247;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:24,19:24:824:19:646:-45.5118,0,-61.5295	1/1:174:0,173:0:0:173:6177:-555.668,-52.0782,0	0/1:86:36,50:36:1277:50:1784:-134.954,0,-89.3441	1/1:135:0,135:0:0:135:4801:-432.245,-40.6391,0	0/1:60:23,36:23:798:36:1284:-97.8887,0,-54.1602	0/1:70:43,27:43:1513:27:964:-66.0047,0,-115.39	0/1:104:39,65:39:1349:65:2336:-179.192,0,-90.3978	1/1:216:0,216:0:0:216:7716:-694.473,-65.0225,0	0/1:87:37,50:37:1287:50:1792:-135.373,0,-89.9391	1/1:83:0,82:0:0:82:2906:-261.416,-24.6845,0	1/1:56:0,56:0:0:56:1996:-179.914,-16.8577,0	1/1:74:1,73:1:36:73:2593:-230.02,-18.6779,0	0/1:73:40,33:40:1388:33:1169:-83.5401,0,-103.239	1/1:78:0,77:0:0:77:2751:-247.551,-23.1793,0	1/1:60:0,60:0:0:60:2152:-193.947,-18.0618,0	1/1:61:0,61:0:0:61:2183:-196.735,-18.3628,0	1/1:57:0,56:0:0:56:1993:-179.283,-16.8577,0	1/1:49:0,49:0:0:49:1748:-157.604,-14.7505,0	1/1:50:0,47:0:0:47:1688:-151.888,-14.1484,0	0/1:237:122,115:122:4275:115:4109:-298.65,0,-313.59	0/1:152:71,81:71:2460:81:2908:-216.198,0,-175.897	0/1:111:77,34:77:2711:34:1219:-76.6023,0,-210.819	0/1:109:55,53:55:1908:53:1889:-137.523,0,-139.233	1/1:128:4,124:4:136:124:4380:-381.799,-25.9566,0	1/1:40:0,40:0:0:40:1424:-128.457,-12.0412,0	1/1:204:1,203:1:36:203:7253:-649.225,-57.8118,0	0/1:221:103,118:103:3560:118:4203:-311.923,0,-254.085	1/1:35:0,35:0:0:35:1247:-112.534,-10.5361,0	0/1:240:132,107:132:4654:107:3787:-268.723,0,-346.723	0/1:144:84,60:84:2932:60:2144:-149.879,0,-220.768	0/1:184:96,88:96:3383:88:3152:-228.516,0,-249.299	0/1:17:12,5:12:431:5:180:-11.4346,0,-34.0132	1/1:36:1,35:1:36:35:1252:-109.387,-7.23881,0	0/1:13:3,10:3:106:10:347:-27.6502,0,-5.97571	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	0/1:29:7,22:7:245:22:776:-61.4323,0,-13.6608	1/1:182:0,181:0:0:181:6449:-580.249,-54.4864,0	1/1:193:0,192:0:0:192:6829:-614.428,-57.7978,0	1/1:98:0,98:0:0:98:3504:-315.571,-29.5009,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:144:0,142:0:0:142:5046:-453.995,-42.7463,0	0/1:48:23,25:23:814:25:900:-66.8716,0,-59.1316	1/1:90:0,89:0:0:89:3120:-280.816,-26.7917,0	1/1:91:0,91:0:0:91:3234:-291.281,-27.3937,0	1/1:57:0,57:0:0:57:2048:-184.592,-17.1587,0	0/1:75:38,37:38:1289:37:1332:-97.6051,0,-93.7273	1/1:106:0,106:0:0:106:3747:-337.431,-31.9092,0	0/1:164:78,85:78:2681:85:3044:-224.762,0,-192.108	1/1:106:0,106:0:0:106:3774:-339.859,-31.9092,0	1/1:216:0,215:0:0:215:7692:-692.005,-64.7215,0	1/1:166:0,165:0:0:165:5872:-528.352,-49.67,0	0/1:28:10,18:10:350:18:648:-50.223,0,-23.4078	1/1:85:0,85:0:0:85:3048:-274.549,-25.5876,0	0/1:61:39,22:39:1383:22:783:-52.4301,0,-106.406	0/1:8:1,7:1:30:7:248:-20.256,0,-0.591326	0/1:151:69,82:69:2350:82:2929:-218.388,0,-166.302	1/1:62:0,62:0:0:62:2195:-197.813,-18.6639,0	0/1:21:16,5:16:557:5:174:-9.67997,0,-44.1351	0/1:6:3,3:3:105:3:108:-8.26899,0,-7.98979	0/1:140:84,56:84:2925:56:2001:-138.218,0,-221.341	0/1:116:57,59:57:2029:59:2103:-154.619,0,-147.962	0/1:8:5,3:5:169:3:108:-7.66693,0,-13.1333	1/1:168:0,168:0:0:168:5986:-538.833,-50.573,0	0/1:217:105,112:105:3702:112:3951:-290.458,0,-268.062	0/1:85:42,42:42:1451:42:1500:-109.648,0,-105.235	0/1:150:68,82:68:2379:82:2927:-218.487,0,-169.214	1/1:158:6,152:6:203:152:5433:-470.498,-28.9614,0	0/1:158:106,51:106:3668:51:1820:-116.46,0,-282.706	0/1:43:25,18:25:872:18:631:-44.1714,0,-65.8516	1/1:90:0,89:0:0:89:3174:-285.524,-26.7917,0	0/1:76:37,39:37:1306:39:1386:-102.16,0,-94.9629	0/1:18:7,11:7:247:11:384:-29.4746,0,-17.1547	1/1:109:0,108:0:0:108:3811:-342.939,-32.5112,0	1/1:62:0,62:0:0:62:2199:-198.175,-18.6639,0	1/1:168:0,166:0:0:166:5927:-533.215,-49.971,0	1/1:237:0,237:0:0:237:8493:-764.367,-71.3441,0	0/1:127:60,66:60:2050:66:2353:-173.847,0,-146.586	1/1:112:0,111:0:0:111:3980:-358.139,-33.4143,0	0/1:26:16,10:16:567:10:356:-24.5545,0,-43.5347	1/1:127:0,127:0:0:127:4516:-406.609,-38.2308,0	0/1:128:74,54:74:2583:54:1927:-135.174,0,-194.186	1/1:201:0,201:0:0:201:7162:-644.64,-60.507,0	0/1:93:45,48:45:1562:48:1709:-126.098,0,-112.872	0/1:67:31,36:31:1084:36:1292:-96.4148,0,-77.6982	1/1:78:0,78:0:0:78:2757:-248.372,-23.4803,0	0/1:147:59,88:59:2067:88:3116:-236.415,0,-142.048	0/1:39:19,19:19:673:19:675:-49.3826,0,-49.2027	1/1:82:0,82:0:0:82:2898:-261.056,-24.6845,0	1/1:80:0,78:0:0:78:2746:-247.15,-23.4803,0	1/1:65:0,65:0:0:65:2332:-210.14,-19.567,0	0/1:94:50,43:50:1724:43:1525:-109.186,0,-127.086	0/1:73:59,14:59:2086:14:500:-23.361,0,-166.029	1/1:130:2,127:2:72:127:4534:-401.391,-32.356,0	1/1:86:2,84:2:72:84:3008:-264.115,-19.0519,0
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chr05	3220580	.	A	C	29649	PASS	AB=0.474256;ABP=25.2593;AC=42;AF=0.223404;AN=188;AO=1852;CIGAR=1X;DP=8434;DPB=8434;DPRA=1.23197;EPP=4024.58;EPPR=14269.6;GTI=1;LEN=1;MEANALT=1.04082;MQM=59.9611;MQMR=59.9868;NS=94;NUMALT=1;ODDS=2.31286;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65515;QR=234402;RO=6574;RPL=1852;RPP=4024.58;RPPR=14269.6;RPR=0;RUN=1;SAF=1852;SAP=4024.58;SAR=0;SRF=6572;SRP=14260.9;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:71:44,27:44:1576:27:963:-65.6105,0,-120.75	0/0:109:109,0:109:3870:0:0:0,-32.8123,-348.497	0/1:151:76,75:76:2693:75:2660:-194.189,0,-197.159	0/0:128:126,2:126:4488:2:72:0,-31.6951,-397.252	0/1:93:38,55:38:1364:55:1941:-146.968,0,-95.0649	0/1:52:33,19:33:1163:19:671:-45.0622,0,-89.3226	0/1:186:89,97:89:3156:97:3450:-254.721,0,-228.276	0/0:128:126,2:126:4477:2:63:0,-32.5487,-397.118	0/1:148:81,67:81:2896:67:2340:-166.306,0,-216.324	0/0:106:106,0:106:3787:0:0:0,-31.9092,-341.026	0/0:49:49,0:49:1728:0:0:0,-14.7505,-155.805	0/0:85:85,0:85:3023:0:0:0,-25.5875,-272.301	0/1:60:36,24:36:1284:24:844:-58.2171,0,-97.8016	0/0:57:56,0:56:2004:0:0:0,-16.8577,-180.359	0/0:71:71,0:71:2531:0:0:0,-21.3731,-228.041	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/0:66:66,0:66:2346:0:0:0,-19.868,-211.398	0/0:78:78,0:78:2761:0:0:0,-23.4803,-248.732	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/1:167:81,86:81:2900:86:3037:-223.286,0,-210.964	0/1:130:68,62:68:2423:62:2194:-158.591,0,-179.192	0/1:95:51,44:51:1819:44:1544:-110.614,0,-135.393	0/1:85:51,34:51:1819:34:1216:-84.159,0,-138.403	0/0:133:125,8:125:4434:8:284:0,-14.1336,-373.329	0/0:75:75,0:75:2676:0:0:0,-22.5772,-241.086	0/0:300:297,3:297:10601:3:108:0,-80.2338,-943.929	0/1:223:119,103:119:4240:103:3650:-261.516,0,-314.59	0/0:48:48,0:48:1711:0:0:0,-14.4494,-154.275	0/1:180:90,90:90:3201:90:3202:-234.218,0,-234.127	0/1:87:41,46:41:1460:46:1637:-121.427,0,-105.506	0/1:136:90,46:90:3232:46:1643:-107.218,0,-250.161	0/1:14:12,2:12:432:2:68:-2.24329,0,-35.0068	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:262:261,0:261:9332:0:0:0,-78.5688,-839.486	0/0:102:102,0:102:3628:0:0:0,-30.7051,-326.727	0/0:78:78,0:78:2780:0:0:0,-23.4803,-250.442	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:81:80,1:80:2837:1:32:0,-21.1841,-252.369	0/1:34:19,15:19:676:15:523:-37.1634,0,-50.933	0/0:117:117,0:117:4196:0:0:0,-35.2205,-377.821	0/0:90:90,0:90:3193:0:0:0,-27.0927,-287.594	0/0:66:66,0:66:2360:0:0:0,-19.868,-212.659	0/1:151:80,71:80:2834:71:2509:-180.605,0,-209.844	0/0:99:99,0:99:3552:0:0:0,-29.802,-319.888	0/1:146:101,45:101:3590:45:1601:-100.428,0,-279.355	0/0:103:103,0:103:3688:0:0:0,-31.0061,-332.123	0/0:98:98,0:98:3493:0:0:0,-29.5009,-314.58	0/0:141:140,0:140:5001:0:0:0,-42.1442,-449.877	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/0:122:122,0:122:4368:0:0:0,-36.7257,-393.294	0/1:34:24,10:24:864:10:347:-21.3286,0,-67.8475	0/1:19:14,5:14:504:5:180:-10.8325,0,-39.9703	0/1:127:73,54:73:2608:54:1898:-132.863,0,-196.738	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.422	0/1:8:2,6:2:68:6:216:-17.3823,0,-4.04947	0/1:16:11,5:11:392:5:180:-11.7356,0,-30.8036	0/1:62:30,32:30:1080:32:1135:-83.7942,0,-78.8494	0/1:109:45,64:45:1612:64:2258:-170.67,0,-112.558	0/1:7:4,3:4:140:3:108:-7.96796,0,-10.8374	0/0:157:157,0:157:5610:0:0:0,-47.2617,-505.019	0/1:239:112,127:112:4000:127:4549:-337.628,0,-288.244	0/1:59:28,31:28:1004:31:1112:-82.6306,0,-72.9151	0/1:73:34,39:34:1220:39:1396:-103.964,0,-88.1316	0/0:143:143,0:143:5092:0:0:0,-43.0473,-458.422	0/1:103:34,69:34:1220:69:2413:-186.417,0,-79.1007	0/1:22:10,12:10:360:12:428:-32.2361,0,-26.1216	0/0:71:71,0:71:2517:0:0:0,-21.3731,-226.781	0/1:87:47,40:47:1668:40:1412:-101.188,0,-124.112	0/1:24:14,10:14:489:10:347:-24.3389,0,-37.1142	0/0:97:96,0:96:3397:0:0:0,-28.8989,-305.587	0/0:79:79,0:79:2832:0:0:0,-23.7814,-255.118	0/0:104:104,0:104:3732:0:0:0,-31.3071,-336.08	0/0:135:135,0:135:4779:0:0:0,-40.639,-430.267	0/1:88:55,33:55:1945:33:1154:-77.6716,0,-148.834	0/0:100:98,2:98:3495:2:72:0,-23.2663,-307.925	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:106:106,0:106:3792:0:0:0,-31.9092,-341.479	0/1:80:39,41:39:1371:41:1441:-105.71,0,-99.6054	0/0:97:93,1:93:3312:1:36:0,-25.055,-294.71	0/1:103:58,45:58:2080:45:1594:-112.743,0,-156.464	0/1:59:30,29:30:1080:29:1017:-74.0795,0,-79.7525	0/0:65:65,0:65:2300:0:0:0,-19.5669,-207.26	0/1:148:76,72:76:2708:72:2527:-183.127,0,-199.412	0/1:47:21,26:21:752:26:915:-68.5172,0,-53.8578	0/0:68:68,0:68:2422:0:0:0,-20.47,-218.235	0/0:68:68,0:68:2403:0:0:0,-20.47,-216.527	0/0:31:31,0:31:1108:0:0:0,-9.33193,-99.713	0/1:72:42,30:42:1504:30:1056:-73.6748,0,-113.98	0/1:70:28,42:28:1004:42:1472:-111.7,0,-69.6038	0/0:88:88,0:88:3144:0:0:0,-26.4906,-283.186	0/0:132:132,0:132:4724:0:0:0,-39.736,-425.319
chr05	3598940	.	A	T	41970.2	PASS	AB=0.512216;ABP=9.16433;AC=47;AF=0.25;AN=188;AO=2451;CIGAR=1X;DP=10456;DPB=10456;DPRA=1.2923;EPP=5221.57;EPPR=16476.5;GTI=1;LEN=1;MEANALT=1.07018;MQM=59.763;MQMR=59.9826;NS=94;NUMALT=1;ODDS=9.97101;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87601;QR=285765;RO=7993;RPL=2440;RPP=5230.17;RPPR=16476.5;RPR=11;RUN=1;SAF=1;SAP=5316.61;SAR=2450;SRF=0;SRP=17359.6;SRR=7993;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:18,32:18:648:32:1152:-88.9382,0,-43.6004	0/0:151:151,0:151:5377:0:0:0,-45.4555,-484.061	0/1:119:71,48:71:2548:48:1701:-117.539,0,-193.748	0/0:326:325,1:325:11594:1:36:0,-94.5375,-1039.66	0/1:109:49,60:49:1741:60:2156:-161.49,0,-124.16	0/1:97:41,56:41:1464:56:2012:-152.14,0,-102.856	0/1:83:41,42:41:1463:42:1497:-110.032,0,-106.98	0/0:210:208,2:208:7428:2:72:0,-56.3796,-661.729	0/1:122:65,57:65:2328:57:2024:-145.706,0,-173.054	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.766	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.457	0/0:55:54,0:54:1922:0:0:0,-16.2556,-172.896	0/1:46:18,28:18:648:28:1008:-77.1881,0,-44.8045	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:38:38,0:38:1355:0:0:0,-11.4391,-122.231	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.533	0/0:43:42,0:42:1496:0:0:0,-12.6433,-134.575	0/1:271:138,133:138:4956:133:4763:-347.244,0,-364.608	0/1:162:75,87:75:2672:87:3101:-230.541,0,-191.958	0/1:202:63,139:63:2247:139:4979:-387.393,0,-141.685	0/1:74:47,27:47:1680:27:972:-65.5217,0,-129.211	0/1:107:96,11:96:3421:11:394:-3.58819,0,-275.893	0/0:102:102,0:102:3628:0:0:0,-30.7051,-326.725	0/0:439:435,1:435:15554:1:36:0,-128.011,-1395.96	0/1:273:124,149:124:4400:149:5311:-395.915,0,-313.976	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/1:348:205,143:205:7329:143:5095:-353.766,0,-554.898	0/1:176:94,82:94:3372:82:2932:-211.133,0,-250.714	0/1:165:80,85:80:2819:85:3031:-223.316,0,-204.279	0/1:30:17,13:17:612:13:468:-33.4287,0,-46.3825	0/0:34:34,0:34:1201:0:0:0,-10.235,-108.394	0/1:13:7,6:7:248:6:216:-15.8771,0,-18.7508	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:23:15,8:15:536:8:276:-17.5408,0,-41.6502	0/0:141:141,0:141:5040:0:0:0,-42.4452,-453.747	0/0:280:278,2:278:9932:2:72:0,-77.4517,-886.983	0/0:46:45,0:45:1612:0:0:0,-13.5463,-145.01	0/0:13:12,0:12:417:0:0:0,-3.61236,-37.5013	0/0:181:176,5:176:6309:5:180:0,-37.9344,-551.346	0/1:31:18,13:18:648:13:468:-33.1277,0,-49.32	0/0:153:153,0:153:5465:0:0:0,-46.0576,-491.978	0/0:39:39,0:39:1385:0:0:0,-11.7402,-124.947	0/0:50:50,0:50:1783:0:0:0,-15.0515,-160.752	0/1:98:51,47:51:1817:47:1688:-122.706,0,-134.308	0/0:143:142,0:142:5062:0:0:0,-42.7463,-455.364	0/1:227:125,102:125:4472:102:3659:-260.67,0,-334.315	0/0:140:140,0:140:4997:0:0:0,-42.1442,-449.854	0/0:194:192,2:192:6884:2:72:0,-51.5631,-612.79	0/0:214:214,0:214:7692:0:0:0,-64.4204,-692.31	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/0:203:203,0:203:7283:0:0:0,-61.1091,-655.518	0/1:74:28,46:28:995:46:1648:-126.328,0,-67.5878	0/1:25:15,10:15:540:10:360:-25.2176,0,-41.4108	0/1:133:59,74:59:2080:74:2648:-198.528,0,-147.431	0/0:34:33,1:33:1184:1:36:0,-6.63674,-103.27	0/1:29:7,22:7:248:22:792:-62.8676,0,-13.9343	0/1:42:11,31:11:388:31:1097:-86.3898,0,-22.6141	0/1:104:51,53:51:1815:53:1880:-138.172,0,-132.324	0/1:77:40,37:40:1436:37:1326:-96.4435,0,-106.358	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	0/0:276:276,0:276:9875:0:0:0,-83.0843,-888.693	0/1:231:128,103:128:4573:103:3665:-260.464,0,-342.197	0/1:71:27,44:27:968:44:1549:-118.327,0,-66.0627	0/1:121:69,52:69:2464:52:1860:-131.252,0,-185.59	0/0:184:184,0:184:6592:0:0:0,-55.3895,-593.357	0/1:192:57,135:57:2044:135:4824:-376.479,0,-126.434	0/1:16:7,9:7:252:9:320:-24.3259,0,-18.2125	0/0:113:111,2:111:3980:2:72:0,-27.1797,-351.552	0/1:75:26,49:26:936:49:1760:-136.106,0,-61.9822	0/1:35:18,17:18:640:17:608:-44.516,0,-47.3933	0/0:131:130,0:130:4660:0:0:0,-39.1339,-419.201	0/0:80:80,0:80:2868:0:0:0,-24.0824,-258.357	0/0:158:158,0:158:5637:0:0:0,-47.5627,-507.451	0/0:229:229,0:229:8220:0:0:0,-68.9359,-739.809	0/1:170:76,94:76:2713:94:3368:-251.828,0,-193.237	0/0:116:116,0:116:4153:0:0:0,-34.9195,-373.934	0/1:28:13,15:13:464:15:540:-40.5077,0,-33.6687	0/0:184:184,0:184:6604:0:0:0,-55.3895,-594.438	0/1:107:52,54:52:1864:54:1928:-141.527,0,-135.77	0/0:353:352,1:352:12596:1:36:0,-102.665,-1129.87	0/1:82:38,43:38:1364:43:1540:-114.15,0,-98.3175	0/1:45:22,23:22:792:23:828:-61.2962,0,-58.0593	0/0:35:35,0:35:1226:0:0:0,-10.536,-110.639	0/1:96:42,53:42:1504:53:1888:-141.15,0,-106.697	0/1:38:18,20:18:648:20:720:-53.6896,0,-47.2127	0/0:67:67,0:67:2376:0:0:0,-20.169,-214.096	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.326	0/0:21:21,0:21:733:0:0:0,-6.32163,-66.2897	0/1:65:35,30:35:1252:30:1076:-77.5859,0,-93.4181	0/1:43:6,37:6:216:37:1321:-106.24,0,-6.84622	0/0:82:80,2:80:2868:2:72:0,-17.8477,-251.52	0/0:65:65,0:65:2340:0:0:0,-19.5669,-210.859
chr05	3604643	.	T	C	63235.6	PASS	AB=0.516327;ABP=15.8444;AC=46;AF=0.244681;AN=188;AO=2881;CIGAR=1X;DP=12843;DPB=12843;DPRA=0.872235;EPP=6259.02;EPPR=21626.5;GTI=1;LEN=1;MEANALT=1.01852;MQM=48.7518;MQMR=59.8859;NS=94;NUMALT=1;ODDS=0.130612;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102621;QR=354624;RO=9958;RPL=1096;RPP=360.818;RPPR=414.686;RPR=1785;RUN=1;SAF=1096;SAP=360.818;SAR=1785;SRF=4292;SRP=414.686;SRR=5666;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:35,12:35:1234:12:414:-21.3274,0,-95.8494	0/0:153:153,0:153:5458:0:0:0,-46.0576,-491.348	0/1:252:133,119:133:4719:119:4245:-292.685,0,-348.235	0/0:206:206,0:206:7362:0:0:0,-62.0122,-662.627	0/1:100:32,68:32:1152:68:2432:-185.351,0,-73.8871	0/1:116:45,71:45:1589:71:2533:-189.37,0,-108.377	0/1:178:89,89:89:3126:89:3167:-230.059,0,-227.981	0/0:226:226,0:226:8053:0:0:0,-68.0328,-724.675	0/1:109:69,40:69:2453:40:1413:-87.609,0,-188.211	0/0:174:174,0:174:6203:0:0:0,-52.3792,-558.341	0/0:106:106,0:106:3791:0:0:0,-31.9092,-341.382	0/0:143:142,0:142:5023:0:0:0,-42.7463,-451.856	0/1:121:60,61:60:2137:61:2171:-151.745,0,-156.171	0/0:138:138,0:138:4887:0:0:0,-41.5421,-439.974	0/0:111:111,0:111:3952:0:0:0,-33.4143,-355.869	0/0:88:88,0:88:3156:0:0:0,-26.4906,-284.265	0/0:113:113,0:113:4008:0:0:0,-34.0164,-360.892	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/0:84:84,0:84:3007:0:0:0,-25.2865,-270.861	0/1:212:88,124:88:3118:124:4433:-327.941,0,-217.014	0/1:146:67,79:67:2408:79:2797:-200.685,0,-173.026	0/1:70:17,53:17:595:53:1896:-147.815,0,-32.8046	0/1:138:75,63:75:2679:63:2248:-156.481,0,-199.712	0/0:130:123,7:123:4369:7:237:0,-17.5028,-371.755	0/0:72:71,0:71:2516:0:0:0,-21.3731,-226.328	0/0:480:479,0:479:17035:0:0:0,-144.193,-1532.38	0/1:301:159,142:159:5679:142:5041:-354.627,0,-420.083	0/0:61:61,0:61:2164:0:0:0,-18.3628,-195.027	0/1:250:116,134:116:4152:134:4787:-350.589,0,-298.576	0/1:174:63,111:63:2248:111:3973:-297.418,0,-150.195	0/1:148:81,66:81:2883:66:2359:-164.866,0,-214.726	0/1:16:6,10:6:216:10:360:-27.8778,0,-14.974	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:6:4,2:4:144:2:72:-5.01335,0,-11.5074	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:11:7,4:7:233:4:144:-9.46497,0,-17.983	0/0:327:327,0:327:11645:0:0:0,-98.4368,-1047.92	0/0:170:170,0:170:6031:0:0:0,-51.1751,-542.895	0/0:129:129,0:129:4567:0:0:0,-38.8329,-410.938	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:185:179,6:179:6400:6:212:0,-36.5862,-556.719	0/1:68:38,30:38:1351:30:1066:-72.7407,0,-101.42	0/0:155:155,0:155:5487:0:0:0,-46.6596,-493.956	0/0:107:107,0:107:3825:0:0:0,-32.2102,-344.436	0/0:92:92,0:92:3266:0:0:0,-27.6948,-294.161	0/1:126:69,57:69:2453:57:2037:-143.377,0,-183.094	0/0:199:199,0:199:7061:0:0:0,-59.905,-635.285	0/1:259:139,120:139:4987:120:4277:-301.491,0,-370.152	0/0:146:146,0:146:5198:0:0:0,-43.9504,-467.956	0/0:214:213,1:213:7587:1:36:0,-60.8247,-679.267	0/0:106:106,0:106:3768:0:0:0,-31.9092,-339.189	0/1:7:1,6:1:36:6:216:-17.3691,0,-1.49106	0/0:191:190,1:190:6790:1:36:0,-53.9075,-607.578	0/1:90:50,40:50:1800:40:1440:-100.238,0,-135.189	0/1:32:18,14:18:648:14:504:-35.2737,0,-49.0189	0/1:189:90,99:90:3195:99:3517:-251.441,0,-230.877	0/0:72:72,0:72:2561:0:0:0,-21.6742,-230.737	0/1:8:5,3:5:180:3:108:-7.59377,0,-14.1438	0/1:12:8,4:8:269:4:144:-9.64098,0,-20.9238	0/1:96:54,42:54:1909:42:1501:-99.9188,0,-143.187	0/1:172:80,92:80:2847:92:3255:-235.003,0,-204.691	0/1:6:3,3:3:108:3:108:-8.17494,0,-8.26899	0/0:253:253,0:253:9044:0:0:0,-76.1606,-813.746	0/1:260:119,141:119:4240:141:5036:-371.244,0,-303.511	0/1:86:46,40:46:1633:40:1415:-98.8687,0,-121.368	0/1:107:38,69:38:1345:69:2433:-185.322,0,-88.5102	0/0:261:261,0:261:9277:0:0:0,-78.5688,-834.488	0/1:192:57,135:57:2048:135:4793:-367.726,0,-126.793	0/1:53:20,33:20:701:33:1167:-85.8018,0,-47.4525	0/0:95:95,0:95:3351:0:0:0,-28.5978,-301.434	0/1:131:65,66:65:2328:66:2354:-170.885,0,-170.345	0/1:40:14,26:14:487:26:919:-69.7865,0,-32.118	0/0:167:167,0:167:5926:0:0:0,-50.272,-533.206	0/0:114:114,0:114:4083:0:0:0,-34.3174,-367.633	0/0:268:268,0:268:9558:0:0:0,-80.676,-860.04	0/0:216:216,0:216:7729:0:0:0,-65.0225,-695.533	0/1:204:128,76:128:4573:76:2720:-175.338,0,-349.459	0/0:183:182,1:182:6499:1:36:0,-51.7009,-580.244	0/1:12:7,5:7:244:5:180:-12.7126,0,-18.6871	0/0:187:186,1:186:6643:1:36:0,-52.8381,-594.49	0/1:150:78,72:78:2789:72:2553:-178.211,0,-206.094	0/0:321:321,0:321:11427:0:0:0,-96.6306,-1028.15	0/1:123:56,67:56:1980:67:2395:-175.172,0,-141.445	0/1:108:53,55:53:1900:55:1955:-141.104,0,-138.767	0/0:127:127,0:127:4512:0:0:0,-38.2308,-406.249	0/1:230:121,109:121:4336:109:3891:-276.867,0,-321.178	0/1:68:35,33:35:1252:33:1180:-83.8572,0,-92.515	0/0:134:133,1:133:4742:1:36:0,-36.7397,-423.341	0/0:89:89,0:89:3191:0:0:0,-26.7917,-287.366	0/0:61:61,0:61:2153:0:0:0,-18.3628,-194.031	0/1:182:91,91:91:3255:91:3227:-228.337,0,-238.383	0/1:137:51,86:51:1783:86:3080:-231.736,0,-119.48	0/0:170:170,0:170:6076:0:0:0,-51.1751,-546.793	0/0:178:177,1:177:6277:1:36:0,-50.2843,-561.728
chr05	3604654	.	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chr05	3721650	.	GTCTTGTT	GT	24677.7	PASS	AB=0.471727;ABP=25.972;AC=44;AF=0.234043;AN=188;AO=1573;CIGAR=1M6D1M;DP=7882;DPB=6699.25;DPRA=0.991098;EPP=3358.21;EPPR=13249.3;GTI=3;LEN=6;MEANALT=1.44;MQM=59.9746;MQMR=60;NS=94;NUMALT=1;ODDS=0.836358;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54887;QR=219169;RO=6267;RPL=7;RPP=3358.21;RPPR=13257.8;RPR=1566;RUN=1;SAF=1573;SAP=3418.74;SAR=0;SRF=6266;SRP=13602.9;SRR=1;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:11:8,3:8:273:3:108:-6.76384,0,-21.5906	0/0:144:144,0:144:5056:0:0:0,-43.3483,-455.198	0/1:78:41,37:41:1438:37:1308:-94.5412,0,-106.235	0/0:189:188,0:188:6531:0:0:0,-56.5936,-587.576	0/0:59:57,2:57:1994:2:72:0,-10.924,-172.896	0/0:72:72,0:72:2549:0:0:0,-21.6742,-229.663	0/1:138:63,74:63:2181:74:2518:-185.269,0,-154.953	0/0:162:162,0:162:5591:0:0:0,-48.7669,-503.33	0/1:81:56,25:56:1975:25:892:-56.2163,0,-153.64	0/0:35:35,0:35:1233:0:0:0,-10.536,-111.274	0/0:55:55,0:55:1944:0:0:0,-16.5566,-175.236	0/0:84:84,0:84:2930:0:0:0,-25.2865,-263.936	0/1:42:25,17:25:883:17:596:-41.3245,0,-67.1453	0/0:50:50,0:50:1708:0:0:0,-15.0515,-154.001	0/0:47:47,0:47:1665:0:0:0,-14.1484,-150.137	0/0:54:54,0:54:1895:0:0:0,-16.2556,-170.828	0/0:41:41,0:41:1438:0:0:0,-12.3422,-129.716	0/0:50:50,0:50:1744:0:0:0,-15.0515,-157.241	0/0:24:24,0:24:842:0:0:0,-7.22472,-76.0978	0/1:190:102,87:102:3521:87:3021:-214.868,0,-259.851	0/1:137:73,62:73:2555:62:2152:-152.948,0,-189.202	0/1:69:38,30:38:1344:30:1014:-70.8304,0,-100.528	0/1:32:14,18:14:486:18:628:-47.2125,0,-34.436	0/1:53:44,9:44:1512:9:316:-12.8243,0,-120.413	0/0:53:52,0:52:1822:0:0:0,-15.6536,-163.901	0/0:301:295,1:295:10353:1:36:0,-85.8664,-928.124	0/1:186:113,68:113:3990:68:2388:-160.334,0,-304.448	0/0:36:36,0:36:1257:0:0:0,-10.8371,-113.431	0/1:200:100,99:100:3521:99:3457:-251.084,0,-256.839	0/1:138:81,57:81:2832:57:1973:-136.302,0,-213.581	0/1:133:43,90:43:1495:90:3133:-242.161,0,-94.806	0/1:6:4,2:4:143:2:72:-5.03054,0,-11.4153	0/0:17:15,0:15:528:0:0:0,-4.51545,-47.4919	0/1:9:7,2:7:243:2:68:-3.74844,0,-19.4991	0/0:11:11,0:11:376:0:0:0,-3.31133,-34.1692	0/1:9:7,2:7:249:2:68:-3.74844,0,-20.0464	0/0:214:212,0:212:7483:0:0:0,-63.8184,-673.213	0/0:184:180,2:180:6275:2:72:0,-48.3006,-558.033	0/0:41:41,0:41:1453:0:0:0,-12.3422,-131.066	0/0:4:4,0:4:138:0:0:0,-1.20412,-12.76	0/0:126:125,1:125:4374:1:36:0,-34.3315,-390.246	0/1:32:14,17:14:504:17:596:-44.2765,0,-36.0063	0/1:95:56,39:56:1972:39:1364:-94.4605,0,-149.157	0/1:68:39,29:39:1379:29:1012:-70.9185,0,-103.938	0/0:53:53,0:53:1835:0:0:0,-15.9546,-165.429	0/1:52:32,20:32:1116:20:666:-44.5979,0,-85.0926	0/0:146:144,0:144:5017:0:0:0,-43.3483,-451.404	0/1:166:80,84:80:2751:84:2926:-213.887,0,-198.148	0/0:112:112,0:112:3909:0:0:0,-33.7154,-352.013	0/0:119:119,0:119:4190:0:0:0,-35.8226,-377.289	0/0:162:161,0:161:5587:0:0:0,-48.4658,-502.609	0/1:7:5,2:5:179:2:68:-4.3505,0,-14.3532	0/0:79:79,0:79:2740:0:0:0,-23.7814,-246.846	0/0:44:44,0:44:1554:0:0:0,-13.2453,-140.151	0/1:14:10,4:10:352:4:140:-8.73016,0,-27.8041	0/1:100:46,53:46:1612:53:1832:-134.996,0,-115.208	0/0:31:31,0:31:1062:0:0:0,-9.33193,-95.8844	0/0:6:6,0:6:195:0:0:0,-1.80618,-17.8685	0/1:7:3,4:3:104:4:140:-10.8374,0,-7.5956	0/1:44:25,19:25:864:19:653:-45.844,0,-64.828	0/1:101:50,51:50:1756:51:1785:-130.524,0,-127.92	0/1:7:1,6:1:36:6:199:-16.1283,0,-1.49106	0/0:186:186,0:186:6492:0:0:0,-55.9916,-584.384	0/1:180:98,82:98:3426:82:2902:-207.226,0,-254.372	0/1:81:53,28:53:1835:28:983:-64.3991,0,-141.046	0/1:75:36,38:36:1261:38:1310:-95.6009,0,-91.1945	0/0:145:142,3:142:4992:3:104:0,-33.9465,-439.734	0/1:107:42,65:42:1481:65:2300:-175.052,0,-101.374	0/1:10:7,3:7:251:3:108:-7.06487,0,-19.9276	0/0:54:53,0:53:1859:0:0:0,-15.9546,-167.228	0/1:76:41,35:41:1404:35:1232:-88.3058,0,-103.774	0/1:14:2,12:2:64:12:428:-34.6444,0,-1.86424	0/0:114:114,0:114:3937:0:0:0,-34.3174,-354.531	0/0:65:65,0:65:2277:0:0:0,-19.5669,-205.191	0/0:155:155,0:155:5439:0:0:0,-46.6596,-489.652	0/0:155:152,0:152:5362:0:0:0,-45.7566,-482.359	0/0:53:49,4:49:1731:4:140:0,-3.01001,-143.13	0/0:79:79,0:79:2732:0:0:0,-23.7814,-246.123	0/1:5:1,4:1:36:4:140:-11.4394,0,-2.09312	0/0:100:100,0:100:3503:0:0:0,-30.103,-315.484	0/1:90:43,47:43:1506:47:1646:-121.331,0,-108.741	0/0:255:255,0:255:8960:0:0:0,-76.7626,-806.405	0/1:109:57,52:57:1991:52:1825:-131.717,0,-146.652	0/1:39:17,22:17:605:22:759:-56.8875,0,-43.0411	0/0:86:86,0:86:3008:0:0:0,-25.8886,-270.956	0/1:141:75,63:75:2634:63:2248:-160.646,0,-195.404	0/1:33:23,10:23:821:10:352:-22.0842,0,-64.279	0/0:60:59,0:59:2049:0:0:0,-17.7608,-184.321	0/0:57:57,0:57:2019:0:0:0,-17.1587,-181.983	0/0:24:24,0:24:825:0:0:0,-7.22472,-74.5642	0/1:83:41,42:41:1434:42:1468:-107.427,0,-104.371	0/1:59:12,47:12:420:47:1633:-129.495,0,-20.3728	0/0:98:97,0:97:3379:0:0:0,-29.1999,-304.11	0/0:84:83,0:83:2902:0:0:0,-24.9855,-261.097
chr05	3728104	.	TAAATC	TAAATT,TAAAATT	581013	PASS	AB=0.688264,0.307344;ABP=2245.74,2351.61;AC=148,40;AF=0.787234,0.212766;AN=188;AO=19214,2260;CIGAR=5M1X,1M1I4M1X;DP=21571;DPB=21955.3;DPRA=0,0.983159;EPP=41656.2,4901.86;EPPR=26.8965;GTI=9;LEN=1,7;MEANALT=2.3617,2.93878;MQM=59.9701,59.969;MQMR=60;NS=94;NUMALT=2;ODDS=0.604192;PAIRED=0,0;PAIREDR=0;PAO=13.5,13;PQA=421,406;PQR=15;PRO=0.5;QA=682576,78331;QR=393;RO=11;RPL=10367,1;RPP=264.12,4901.86;RPPR=3.20771;RPR=8847,2259;RUN=1,1;SAF=10371,2;SAP=266.876,4893.18;SAR=8843,2258;SRF=5;SRP=3.20771;SRR=6;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:73:0,37,36:0:0:37,36:1309,1220:-205.886,-99.2606,-88.1224,-106.971,0,-96.1344	1/1:384:0,383,0:0:0:383,0:13649,0:-1227.25,-115.294,0,-1227.25,-115.294,-1227.25	1/2:252:0,185,67:0:0:185,67:6578,2350:-727.484,-191.531,-135.841,-536.245,0,-516.076	1/1:698:1,693,1:1:35:693,1:24600,36:-2209.89,-205.753,0,-2207.25,-205.661,-2209.8	1/1:170:0,170,0:0:0:170,0:6020,0:-541.908,-51.1751,0,-541.908,-51.1751,-541.908	1/1:147:0,147,0:0:0:147,0:5244,0:-472.093,-44.2514,0,-472.093,-44.2514,-472.093	1/2:181:0,160,20:0:0:160,20:5632,682:-513.818,-55.3177,-7.15288,-458.483,0,-452.463	1/1:492:1,490,0:1:36:490,0:17392,0:-1561.32,-144.557,0,-1561.62,-147.505,-1564.56	1/2:138:0,116,20:0:0:116,20:4126,682:-391.654,-55.3864,-20.4669,-336.32,0,-330.299	1/1:304:0,304,0:0:0:304,0:10774,0:-969.515,-91.5131,0,-969.515,-91.5131,-969.515	1/1:164:0,161,0:0:0:161,0:5737,0:-516.083,-48.4658,0,-516.083,-48.4658,-516.083	1/1:170:1,169,0:1:35:169,0:5952,0:-532.294,-47.6765,0,-532.595,-50.8741,-535.443	1/2:118:0,71,47:0:0:71,47:2531,1643:-337.834,-133.95,-112.577,-204.176,0,-190.028	1/1:159:0,159,0:0:0:159,0:5589,0:-503.136,-47.8638,0,-503.136,-47.8638,-503.136	1/1:153:0,153,0:0:0:153,0:5446,0:-490.268,-46.0576,0,-490.268,-46.0576,-490.268	1/1:127:0,127,0:0:0:127,0:4531,0:-407.899,-38.2308,0,-407.899,-38.2308,-407.899	1/1:135:0,135,0:0:0:135,0:4741,0:-426.851,-40.6391,0,-426.851,-40.6391,-426.851	1/1:130:0,130,0:0:0:130,0:4597,0:-413.896,-39.1339,0,-413.896,-39.1339,-413.896	1/1:87:0,87,0:0:0:87,0:3087,0:-278.057,-26.1896,0,-278.057,-26.1896,-278.057	1/2:459:1,335,122:1:35:335,122:11963,4274:-1319.33,-344.924,-246.926,-971.859,0,-937.981	1/2:308:0,245,60:0:0:245,60:8700,2087:-878.591,-169.692,-95.9399,-708.904,0,-690.842	1/2:160:0,82,75:0:0:82,75:2927,2632:-452.84,-214.214,-189.529,-238.643,0,-216.066	1/2:134:0,95,39:0:0:95,39:3372,1346:-384.447,-109.694,-81.0962,-275.101,0,-263.36	1/1:263:0,257,6:0:0:257,6:9160,212:-824.02,-77.3647,0,-806.755,-59.7461,-804.948	1/1:252:0,252,0:0:0:252,0:8926,0:-803.325,-75.8596,0,-803.325,-75.8596,-803.325	1/1:814:0,810,0:0:0:810,0:28835,0:-2594.03,-243.834,0,-2594.03,-243.834,-2594.03	1/2:436:0,302,133:0:0:302,133:10713,4580:-1244.8,-371.98,-281.069,-872.813,0,-832.776	1/1:113:0,112,0:0:0:112,0:3950,0:-355.334,-33.7154,0,-355.334,-33.7154,-355.334	1/2:605:0,430,173:0:0:430,173:15224,5933:-1721.76,-481.66,-352.217,-1240.09,0,-1188.01	1/2:258:0,187,70:0:0:187,70:6651,2446:-741.054,-199.032,-142.739,-542.082,0,-521.01	1/2:165:0,123,40:0:0:123,40:4339,1405:-467.726,-114.416,-77.3892,-353.373,0,-341.332	1/2:8:0,6,2:0:0:6,2:207,72:-23.0393,-6.23466,-4.42848,-17.1607,0,-16.5587	1/1:19:0,19,0:0:0:19,0:675,0:-61.077,-5.71957,0,-61.077,-5.71957,-61.077	1/2:5:0,3,2:0:0:3,2:104,68:-14.3128,-5.85565,-4.95256,-8.79971,0,-8.19765	1/1:21:0,21,0:0:0:21,0:756,0:-68.3672,-6.32163,0,-68.3672,-6.32163,-68.3672	1/1:14:0,14,0:0:0:14,0:483,0:-43.7973,-4.21442,0,-43.7973,-4.21442,-43.7973	1/1:529:0,527,0:0:0:527,0:18743,0:-1686.06,-158.643,0,-1686.06,-158.643,-1686.06	1/1:483:0,479,0:0:0:479,0:16997,0:-1529.08,-144.193,0,-1529.08,-144.193,-1529.08	1/1:168:0,168,0:0:0:168,0:6001,0:-540.196,-50.573,0,-540.196,-50.573,-540.196	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/1:594:0,584,5:0:0:584,5:20640,180:-1856.67,-175.802,0,-1841.98,-161.099,-1840.47	1/2:61:0,44,17:0:0:44,17:1580,590:-177.203,-48.3067,-35.0613,-129.246,0,-124.129	1/2:282:0,185,97:0:0:185,97:6603,3401:-815.268,-276.96,-221.269,-538.602,0,-509.402	1/2:163:0,117,45:0:0:117,45:4188,1550:-467.551,-126.018,-90.7972,-341.659,0,-328.113	1/1:172:0,172,0:0:0:172,0:6131,0:-551.891,-51.7772,0,-551.891,-51.7772,-551.891	1/2:186:0,144,41:0:0:144,41:5093,1395:-527.99,-113.176,-69.8282,-414.836,0,-402.494	1/1:405:0,402,0:0:0:402,0:14272,0:-1283.93,-121.014,0,-1283.93,-121.014,-1283.93	1/2:306:0,216,89:0:0:216,89:7675,3071:-874.937,-249.517,-184.494,-625.457,0,-598.666	1/1:275:0,274,0:0:0:274,0:9713,0:-873.766,-82.4822,0,-873.766,-82.4822,-873.766	1/1:436:0,435,0:0:0:435,0:15528,0:-1396.09,-130.948,0,-1396.09,-130.948,-1396.09	1/1:464:0,462,0:0:0:462,0:16456,0:-1480.45,-139.076,0,-1480.45,-139.076,-1480.45	1/2:11:0,6,5:0:0:6,5:216,163:-31.1292,-13.4862,-11.68,-17.9843,0,-16.4792	1/1:591:0,590,0:0:0:590,0:21018,0:-1890.68,-177.608,0,-1890.68,-177.608,-1890.68	1/1:71:0,71,0:0:0:71,0:2521,0:-227.14,-21.3731,0,-227.14,-21.3731,-227.14	1/1:10:0,10,0:0:0:10,0:347,0:-31.5636,-3.0103,0,-31.5636,-3.0103,-31.5636	1/2:260:0,188,72:0:0:188,72:6672,2483:-745.605,-201.989,-145.395,-543.905,0,-522.23	1/1:137:0,137,0:0:0:137,0:4792,0:-431.394,-41.2411,0,-431.394,-41.2411,-431.394	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:22:0,21,1:0:0:21,1:737,36:-66.2338,-6.32163,0,-63.2961,-3.02439,-62.995	1/2:127:0,92,33:0:0:92,33:3255,1130:-356.906,-91.773,-64.0782,-265.182,0,-255.248	1/2:227:0,136,90:0:0:136,90:4824,3122:-646.721,-253.694,-212.754,-392.958,0,-365.865	1/2:6:0,5,1:0:0:5,1:167,36:-16.795,-3.29724,-1.79209,-13.8533,0,-13.5522	1/1:520:1,518,0:1:36:518,0:18484,0:-1659.59,-152.946,0,-1659.89,-155.934,-1662.83	1/2:267:0,165,102:0:0:165,102:5850,3498:-760.826,-284.235,-234.565,-476.879,0,-446.174	1/2:148:0,100,47:0:0:100,47:3540,1621:-420.022,-131.666,-101.563,-288.344,0,-274.196	1/2:183:0,106,76:0:0:106,76:3787,2687:-527.623,-218.858,-186.949,-308.78,0,-285.902	1/1:445:0,442,2:0:0:442,2:15692,72:-1411.57,-133.055,0,-1405.7,-127.127,-1405.09	1/2:157:0,75,82:0:0:75,82:2668,2891:-453.099,-235.685,-213.107,-217.71,0,-193.025	1/2:51:0,34,17:0:0:34,17:1216,568:-145.487,-46.3174,-36.0824,-99.5115,0,-94.394	1/1:263:0,261,0:0:0:261,0:9224,0:-829.794,-78.5688,0,-829.794,-78.5688,-829.794	1/2:155:0,98,56:0:0:98,56:3512,1951:-445.082,-158.646,-129.145,-286.429,0,-269.571	1/2:25:0,21,4:0:0:21,4:743,140:-72.2617,-11.7405,-5.41883,-60.8717,0,-59.6676	1/1:296:1,294,0:1:36:294,0:10329,0:-925.718,-85.5204,0,-926.019,-88.5028,-928.957	1/1:208:0,208,0:0:0:208,0:7427,0:-668.298,-62.6142,0,-668.298,-62.6142,-668.298	1/1:311:0,307,0:0:0:307,0:10917,0:-982.012,-92.4162,0,-982.012,-92.4162,-982.012	1/1:403:0,398,2:0:0:398,2:14189,72:-1276.44,-119.81,0,-1270.56,-113.918,-1269.96	1/2:256:0,197,59:0:0:197,59:6998,2028:-735.266,-165.028,-105.725,-570.584,0,-552.823	1/1:359:0,358,1:0:0:358,1:12704,36:-1142.83,-107.769,0,-1139.89,-104.471,-1139.59	1/1:5:0,5,0:0:0:5,0:176,0:-16.185,-1.50515,0,-16.185,-1.50515,-16.185	1/1:368:0,364,1:0:0:364,1:12944,36:-1164.51,-109.575,0,-1161.57,-106.61,-1161.27	1/2:208:1,135,72:1:36:135,72:4780,2468:-586.41,-197.345,-159.644,-386.357,0,-367.62	1/1:716:0,709,2:0:0:709,2:25192,57:-2266.31,-213.43,0,-2261.78,-208.904,-2261.18	1/2:198:1,137,60:1:36:137,60:4888,2106:-566.615,-168.45,-130.146,-395.522,0,-380.398	1/2:116:0,73,42:0:0:73,42:2603,1478:-332.499,-120.31,-98.3349,-212.183,0,-199.54	1/1:221:1,220,0:1:36:220,0:7832,0:-701.311,-62.9294,0,-701.612,-66.2266,-704.55	1/2:237:1,146,90:1:36:146,90:5183,3071:-668.245,-246.231,-205.219,-419.364,0,-395.209	1/2:91:0,66,25:0:0:66,25:2372,874:-264.922,-71.4495,-51.5815,-193.825,0,-186.299	1/1:177:1,176,0:1:36:176,0:6245,0:-558.489,-49.684,0,-558.79,-52.9813,-561.728	1/1:159:0,156,0:0:0:156,0:5557,0:-499.876,-46.9607,0,-499.876,-46.9607,-499.876	1/1:84:0,84,0:0:0:84,0:3008,0:-270.892,-25.2865,0,-270.892,-25.2865,-270.892	1/2:138:0,83,54:0:0:83,54:2972,1891:-396.221,-153.85,-128.864,-242.364,0,-226.109	1/2:126:0,68,57:0:0:68,57:2423,1961:-356.759,-159.253,-138.783,-197.506,0,-180.347	1/1:316:0,314,0:0:0:314,0:11129,0:-1001.22,-94.5234,0,-1001.22,-94.5234,-1001.22	1/1:249:0,248,0:0:0:248,0:8835,0:-794.79,-74.6554,0,-794.79,-74.6554,-794.79
chr05	3774898	.	G	A	100889	PASS	AB=0.371962;ABP=2663.2;AC=92;AF=0.489362;AN=188;AO=6949;CIGAR=1X;DP=18703;DPB=18703;DPRA=19.3395;EPP=15092.6;EPPR=25496.1;GTI=12;LEN=1;MEANALT=1.09783;MQM=59.9118;MQMR=32.7377;NS=94;NUMALT=1;ODDS=0.595044;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=246879;QR=419023;RO=11744;RPL=0;RPP=15092.6;RPPR=25504.8;RPR=6949;RUN=1;SAF=6949;SAP=15092.6;SAR=0;SRF=11743;SRP=25496.1;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:31,14:31:1116:14:500:-31.7898,0,-43.1965	0/1:295:109,186:109:3897:186:6614:-506.53,0,-251.398	0/1:237:79,158:79:2802:158:5588:-431.699,0,-172.57	0/1:552:294,258:294:10412:258:9133:-655.778,0,-732.836	0/1:195:151,44:151:5412:44:1569:-82.6087,0,-304.409	0/1:102:85,17:85:3021:17:604:-23.9855,0,-173.497	0/1:300:104,196:104:3724:196:6981:-538.048,0,-231.696	0/1:345:263,82:263:9393:82:2924:-159.54,0,-532.994	0/1:116:74,42:74:2637:42:1493:-99.7431,0,-113.381	0/1:249:192,57:192:6861:57:2026:-107.526,0,-379.908	0/1:125:96,29:96:3448:29:1036:-55.9252,0,-220.328	0/1:164:100,64:100:3592:64:2288:-156.813,0,-262.894	0/1:75:50,25:50:1777:25:896:-58.3831,0,-104.068	0/1:154:124,30:124:4428:30:1057:-49.0803,0,-287.887	0/1:118:92,26:92:3289:26:920:-47.595,0,-184.482	0/1:110:88,21:88:3156:21:748:-34.4734,0,-179.637	0/1:142:109,33:109:3885:33:1188:-64.368,0,-230.524	0/1:135:102,33:102:3645:33:1184:-66.2293,0,-208.332	0/1:97:74,23:74:2633:23:828:-45.6442,0,-166.691	0/1:510:339,171:339:12093:171:6054:-391.435,0,-544.051	0/1:163:110,53:110:3921:53:1896:-121.85,0,-179.937	0/1:197:141,55:141:4969:55:1936:-114.773,0,-169.634	0/1:57:9,48:9:324:48:1720:-137.927,0,-11.1681	0/1:235:165,70:165:5868:70:2500:-154.511,0,-283.007	0/1:139:56,83:56:2008:83:2927:-221.819,0,-132.766	0/1:770:569,201:569:20348:201:7104:-407.633,0,-1182.45	0/1:341:234,107:234:8290:107:3820:-241.343,0,-394.992	0/1:82:70,12:70:2497:12:428:-14.1743,0,-151.9	0/1:541:387,154:387:13831:154:5442:-327.056,0,-644.155	0/1:298:196,102:196:6971:102:3634:-237.559,0,-323.061	0/1:159:101,58:101:3601:58:2060:-137.611,0,-182.817	0/1:5:1,4:1:36:4:144:-11.8085,0,-1.97555	0/1:36:27,9:27:972:9:312:-17.5783,0,-55.4671	0/1:7:5,2:5:180:2:72:-4.72951,0,-13.955	0/0:16:16,0:16:572:0:0:0,-4.81648,-42.3011	0/1:20:17,3:17:608:3:108:-4.05457,0,-41.1414	0/1:451:351,100:351:12517:100:3580:-186.643,0,-741.343	0/1:518:398,120:398:14196:120:4272:-228.255,0,-827.462	0/1:125:99,26:99:3560:26:936:-46.9307,0,-220.949	0/0:5:5,0:5:180:0:0:0,-1.50515,-13.9739	0/1:409:184,225:184:6589:225:8015:-598.124,0,-440.269	0/1:39:30,9:30:1076:9:324:-17.7657,0,-47.17	0/1:258:163,95:163:5743:95:3374:-226.204,0,-250.034	0/1:83:58,25:58:2084:25:877:-54.2597,0,-112.55	0/1:110:91,19:91:3244:19:672:-27.6912,0,-201.033	0/1:124:37,87:37:1309:87:3089:-240.91,0,-74.063	0/1:318:238,80:238:8447:80:2834:-159.563,0,-489.729	0/1:350:114,235:114:4039:235:8409:-648.972,0,-242.542	0/1:271:204,66:204:7301:66:2348:-127.728,0,-406.939	0/1:300:229,71:229:8140:71:2524:-137.103,0,-487.004	0/1:377:186,191:186:6657:191:6716:-491.04,0,-461.228	0/1:15:11,4:11:392:4:140:-8.42913,0,-15.2018	0/1:440:218,222:218:7809:222:7886:-577.31,0,-548.32	0/1:59:26,33:26:928:33:1184:-89.1075,0,-60.8051	0/1:40:28,12:28:1004:12:424:-26.4552,0,-38.2602	0/1:265:187,78:187:6655:78:2788:-171.386,0,-336.595	0/1:69:51,18:51:1828:18:640:-37.1582,0,-107.26	0/1:13:8,5:8:288:5:180:-12.6387,0,-19.2457	0/1:31:21,10:21:748:10:360:-23.4124,0,-29.4867	0/1:88:64,24:64:2281:24:852:-50.5097,0,-109.721	0/1:192:134,58:134:4789:58:2064:-128.231,0,-246.309	0/1:16:2,14:2:72:14:492:-39.7959,0,-1.74705	0/1:549:389,159:389:13861:159:5637:-342.152,0,-767.289	0/1:336:234,102:234:8354:102:3629:-225.669,0,-372.885	0/1:158:118,40:118:4240:40:1428:-81.2548,0,-233.05	0/1:156:59,97:59:2116:97:3429:-261.864,0,-136.187	0/1:308:239,69:239:8564:69:2448:-127.854,0,-488.344	0/1:264:182,80:182:6506:80:2849:-177.661,0,-249.808	0/1:44:20,24:20:720:24:860:-64.4765,0,-49.7917	0/1:178:89,89:89:3181:89:3118:-227.26,0,-223.769	0/1:171:117,54:117:4155:54:1931:-122.59,0,-223.715	0/1:43:35,8:35:1237:8:280:-12.595,0,-57.8274	0/1:319:153,165:153:5435:165:5857:-431.158,0,-378.487	0/1:160:126,33:126:4482:33:1165:-57.1774,0,-253.409	0/1:223:103,119:103:3659:119:4175:-308.708,0,-251.685	0/1:465:200,265:200:7131:265:9386:-704.734,0,-476.342	0/1:268:173,95:173:6170:95:3401:-225.623,0,-279.216	0/1:268:167,101:167:5970:101:3612:-242.98,0,-436.763	0/1:8:4,4:4:144:4:140:-10.5363,0,-10.3536	0/1:298:166,132:166:5932:132:4645:-328.513,0,-426.626	0/1:215:155,60:155:5537:60:2148:-128.866,0,-277.525	0/1:588:291,297:291:10420:297:10499:-767.832,0,-723.686	0/1:152:103,49:103:3666:49:1752:-112.208,0,-177.856	0/1:85:29,56:29:1040:56:2004:-155.045,0,-64.4512	0/1:151:115,36:115:4105:36:1292:-71.1282,0,-228.266	0/1:184:74,110:74:2633:110:3940:-299.402,0,-172.605	0/1:88:62,26:62:2228:26:932:-57.7082,0,-108.739	0/1:112:83,29:83:2972:29:1036:-59.8386,0,-174.843	0/1:143:75,68:75:2700:68:2402:-173.387,0,-190.523	0/1:83:53,30:53:1881:30:1068:-71.2563,0,-136.635	0/1:140:101,39:101:3575:39:1392:-83.4348,0,-189.912	0/1:81:65,16:65:2328:16:572:-27.43,0,-92.8048	0/1:178:73,105:73:2624:105:3738:-283.035,0,-172.025	0/1:189:94,95:94:3364:95:3400:-249.318,0,-234.077
chr05	3774903	.	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chr05	3774915	.	A	G	111369	PASS	AB=0.55466;ABP=489.175;AC=92;AF=0.489362;AN=188;AO=10396;CIGAR=1X;DP=18755;DPB=18755;DPRA=0;EPP=22369.7;EPPR=17780.4;GTI=2;LEN=1;MEANALT=1.08511;MQM=44.2491;MQMR=40.9745;NS=94;NUMALT=1;ODDS=97.7353;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=371266;QR=299521;RO=8350;RPL=25;RPP=22361;RPPR=17780.4;RPR=10371;RUN=1;SAF=10395;SAP=22569;SAR=1;SRF=8350;SRP=18134.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:13,34:13:464:34:1220:-52.975,0,-26.9321	0/1:293:107,186:107:3825:186:6663:-511.543,0,-245.588	0/1:231:79,152:79:2840:152:5430:-419.293,0,-177.399	0/1:552:298,253:298:10678:253:9041:-645.319,0,-757.589	0/1:192:99,93:99:3548:93:3320:-132.452,0,-251.419	0/1:100:54,46:54:1932:46:1635:-52.8285,0,-138.736	0/1:299:106,193:106:3804:193:6864:-527.823,0,-238.8	0/1:349:171,178:171:6152:178:6334:-272.951,0,-431.314	0/1:116:28,88:28:1008:88:3134:-158.506,0,-53.0587	0/1:255:124,131:124:4429:131:4643:-191.094,0,-306.351	0/1:123:73,50:73:2628:50:1792:-79.7924,0,-190.143	0/1:164:100,64:100:3596:64:2300:-157.892,0,-262.945	0/1:76:35,41:35:1260:41:1468:-77.4986,0,-86.9562	0/1:157:101,56:101:3601:56:1996:-79.0759,0,-266.396	0/1:121:61,60:61:2188:60:2137:-87.9891,0,-152.187	0/1:110:57,53:57:2048:53:1882:-70.9533,0,-145.493	0/1:142:77,65:77:2756:65:2332:-97.8805,0,-197.198	0/1:134:68,66:68:2444:66:2364:-100.104,0,-172.991	0/1:97:57,40:57:2052:40:1428:-63.6032,0,-150.18	0/1:511:164,346:164:5880:346:12357:-586.946,0,-354.63	0/1:164:52,112:52:1872:112:3991:-193.417,0,-113.824	0/1:200:37,163:37:1328:163:5796:-239.556,0,-54.7749	0/1:57:9,48:9:320:48:1707:-136.756,0,-10.8781	0/1:236:85,151:85:3056:151:5373:-245.934,0,-194.501	0/1:141:58,83:58:2080:83:2959:-224.098,0,-138.364	0/1:773:392,380:392:14035:380:13581:-617.351,0,-979.331	0/1:346:121,225:121:4348:225:8048:-379.1,0,-274.894	0/1:80:49,31:49:1760:31:1104:-32.7701,0,-129.652	0/1:536:189,347:189:6792:347:12421:-539.564,0,-426.252	0/1:291:96,195:96:3437:195:6979:-339.318,0,-211.498	0/1:160:57,103:57:2044:103:3682:-192.419,0,-128.869	0/1:6:2,4:2:68:4:144:-11.5074,0,-4.49159	0/1:36:18,18:18:644:18:640:-27.8922,0,-45.5353	0/1:7:5,2:5:180:2:72:-4.72951,0,-13.955	0/0:16:12,4:12:428:4:144:0,-0.382462,-33.3106	0/1:20:14,6:14:504:6:216:-7.17021,0,-38.2041	0/1:457:254,203:254:9128:203:7255:-293.285,0,-651.141	0/1:517:267,249:267:9577:249:8874:-378.884,0,-675.058	0/1:125:71,54:71:2556:54:1919:-82.2555,0,-185.196	0/0:5:4,1:4:144:1:36:0,-0.306767,-11.7429	0/1:408:178,230:178:6384:230:8221:-608.427,0,-432.796	0/1:40:14,26:14:500:26:921:-35.5195,0,-31.4365	0/1:259:73,185:73:2624:185:6616:-331.688,0,-150.475	0/1:85:38,47:38:1368:47:1688:-79.257,0,-92.776	0/1:115:72,43:72:2568:43:1535:-53.188,0,-188.955	0/1:124:36,88:36:1288:88:3152:-244.324,0,-74.308	0/1:322:160,162:160:5740:162:5780:-266.644,0,-403.68	0/1:352:116,236:116:4168:236:8391:-644.805,0,-254.683	0/1:273:134,139:134:4804:139:4988:-212.673,0,-333.009	0/1:301:166,135:166:5949:135:4840:-211.026,0,-424.399	0/1:378:186,191:186:6657:191:6808:-498.944,0,-461.524	0/1:15:4,11:4:144:11:396:-16.014,0,-8.26617	0/1:441:218,223:218:7836:223:7969:-584.47,0,-549.94	0/1:60:26,34:26:928:34:1211:-89.0668,0,-62.4695	0/1:41:10,31:10:356:31:1112:-48.49,0,-19.1869	0/1:261:104,157:104:3720:157:5582:-251.992,0,-245.451	0/1:72:40,32:40:1428:32:1140:-49.0821,0,-102.442	0/1:13:7,6:7:252:6:216:-13.6772,0,-18.1953	0/1:29:7,22:7:252:22:784:-36.3729,0,-13.5103	0/1:89:35,54:35:1256:54:1936:-81.7822,0,-82.9976	0/1:192:78,114:78:2792:114:4062:-192.442,0,-182.087	0/1:16:2,14:2:72:14:500:-40.5197,0,-1.74705	0/1:556:262,292:262:9382:292:10449:-489.845,0,-642.568	0/1:334:102,231:102:3664:231:8201:-378.668,0,-217.018	0/1:159:74,85:74:2660:85:3045:-129.959,0,-183.665	0/1:153:60,93:60:2152:93:3282:-249.542,0,-139.867	0/1:314:164,150:164:5892:150:5362:-220.201,0,-414.322	0/1:264:65,199:65:2336:199:7107:-306.8,0,-120.543	0/1:46:21,25:21:756:25:888:-66.3916,0,-52.4287	0/1:181:92,89:92:3296:89:3190:-232.837,0,-233.024	0/1:172:74,98:74:2660:98:3503:-171.156,0,-178.757	0/1:41:14,27:14:500:27:964:-36.0547,0,-31.2345	0/1:317:154,163:154:5517:163:5828:-429.199,0,-386.089	0/1:162:84,78:84:3016:78:2787:-107.936,0,-213.94	0/1:227:111,116:111:3980:116:4147:-305.057,0,-276.343	0/1:463:199,264:199:7156:264:9407:-707.218,0,-478.643	0/1:271:82,189:82:2928:189:6780:-334.498,0,-173.84	0/1:270:167,103:167:6000:103:3687:-246.426,0,-440.96	0/1:8:4,4:4:140:4:140:-10.5363,0,-10.0181	0/1:299:167,132:167:5995:132:4728:-335.671,0,-431.616	0/1:223:88,135:88:3156:135:4792:-215.895,0,-208.328	0/1:591:296,295:296:10632:295:10550:-771.503,0,-740.973	0/1:151:56,95:56:2012:95:3408:-162.273,0,-128.426	0/1:83:30,53:30:1072:53:1900:-146.292,0,-67.8748	0/1:150:74,76:74:2660:76:2736:-115.338,0,-184.957	0/1:182:75,107:75:2684:107:3824:-289.57,0,-177.819	0/1:87:31,56:31:1108:56:2014:-92.9403,0,-70.9761	0/1:112:57,55:57:2040:55:1972:-88.0376,0,-144.36	0/1:145:77,68:77:2768:68:2419:-172.063,0,-197.982	0/1:82:53,29:53:1904:29:1032:-66.6095,0,-140.805	0/1:138:59,79:59:2120:79:2817:-128.407,0,-143.353	0/1:82: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chr05	3774947	.	CT	GC,CC	264624	PASS	AB=0.633029,0.362106;ABP=2814.86,3024.3;AC=96,92;AF=0.510638,0.489362;AN=188;AO=11600,6624;CIGAR=2X,1M1X;DP=18313;DPB=18317;DPRA=0,19.8837;EPP=25192.1,14386.8;EPPR=26.8965;GTI=10;LEN=2,1;MEANALT=2.56383,2.59783;MQM=32.2742,59.9648;MQMR=58.0909;NS=94;NUMALT=2;ODDS=20297.3;PAIRED=0,0;PAIREDR=0;PAO=8,0;PQA=276,0;PQR=0;PRO=0;QA=398578,228022;QR=372;RO=11;RPL=11600,6624;RPP=25192.1,14386.8;RPPR=19.0002;RPR=0,0;RUN=1,1;SAF=11600,6624;SAP=25192.1,14386.8;SAR=0,0;SRF=10;SRP=19.0002;SRR=1;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:42:0,29,13:0:0:29,13:1016,438:-78.2899,-35.8262,-27.0963,-42.757,0,-38.8436	1/2:286:0,107,179:0:0:107,179:3642,6194:-790.072,-503.68,-471.47,-286.728,0,-232.844	1/2:231:2,76,153:2:72:76,153:2634,5274:-628.313,-422.515,-405.511,-200.504,0,-160.322	1/2:538:0,293,240:0:0:293,240:9952,8320:-1451.28,-676.274,-588.072,-775.039,0,-702.792	1/2:192:0,150,41:0:0:150,41:5184,1436:-423.763,-116.831,-71.6767,-306.903,0,-294.561	1/2:97:0,81,16:0:0:81,16:2768,558:-208.212,-45.7308,-21.3474,-162.815,0,-157.998	1/2:292:0,104,186:0:0:104,186:3594,6410:-800.853,-520.662,-489.354,-280.178,0,-224.187	1/2:336:2,257,77:2:63:257,77:8853,2702:-738.321,-214.862,-142.563,-519.009,0,-500.897	1/2:108:0,68,37:0:0:68,37:2342,1270:-207.169,-103.105,-82.6353,-104.009,0,-92.871	1/2:245:0,193,51:0:0:193,51:6597,1744:-521.606,-141.527,-83.4278,-380.043,0,-364.69	1/2:123:0,95,28:0:0:95,28:3298,914:-293.569,-74.129,-45.5311,-219.758,0,-211.329	1/2:158:0,97,61:0:0:97,61:3293,2060:-425.541,-167.306,-138.106,-258.569,0,-240.206	1/2:76:0,50,25:0:0:50,25:1715,851:-175.519,-69.0337,-53.9822,-106.463,0,-98.9368	1/2:152:0,122,30:0:0:122,30:4140,1001:-359.19,-81.3592,-44.6335,-278.155,0,-269.124	1/2:122:0,95,26:0:0:95,26:3230,915:-263.603,-74.6332,-46.0353,-189.096,0,-181.269	1/2:109:0,88,21:0:0:88,21:2895,695:-229.83,-56.5374,-30.0467,-173.608,0,-167.287	1/2:139:0,106,33:0:0:106,33:3594,1099:-311.994,-89.2664,-57.3573,-223.045,0,-213.111	1/2:134:0,101,33:0:0:101,33:3376,1123:-294.181,-91.4366,-61.0326,-203.064,0,-193.13	1/2:94:1,72,21:1:34:72,21:2482,708:-218.12,-54.6131,-35.6971,-161.036,0,-157.473	1/2:503:0,335,166:0:0:335,166:11577,5690:-1031.03,-462.026,-361.181,-569.069,0,-519.098	1/2:155:0,105,50:0:0:105,50:3636,1647:-317.446,-133.452,-101.844,-184.291,0,-169.239	1/2:197:0,142,52:0:0:142,52:4825,1758:-321.163,-142.551,-99.8049,-178.618,0,-162.964	1/2:52:0,9,43:0:0:9,43:304,1469:-143.234,-119.554,-116.844,-24.0087,0,-11.0644	1/2:228:0,161,67:0:0:161,67:5560,2269:-469.616,-184.298,-135.833,-285.625,0,-265.456	1/2:136:0,55,80:0:0:55,80:1880,2774:-372.432,-225.458,-208.901,-146.951,0,-122.869	1/2:758:1,564,190:1:36:564,190:19281,6511:-1691.48,-525.623,-358.78,-1163.22,0,-1108.96	1/2:327:0,225,99:0:0:225,99:7768,3487:-674.88,-283.951,-216.219,-390.953,0,-361.151	1/2:80:0,69,11:0:0:69,11:2345,380:-179.291,-31.2206,-10.4496,-148.406,0,-145.094	1/2:531:0,384,147:0:0:384,147:13225,5025:-1066.77,-408.152,-292.556,-658.922,0,-614.671	1/2:291:0,195,96:0:0:195,96:6755,3340:-613.507,-271.919,-213.218,-341.897,0,-312.998	1/2:160:0,100,60:0:0:100,60:3367,2035:-351.247,-165.354,-135.251,-186.195,0,-168.133	1/2:6:0,2,4:0:0:2,4:64,125:-15.3862,-10.3545,-9.75244,-5.34446,0,-4.14034	1/2:35:0,26,8:0:0:26,8:934,288:-78.2544,-23.4993,-15.6726,-54.7348,0,-52.3266	1/2:7:0,5,2:0:0:5,2:178,72:-20.2726,-6.23466,-4.72951,-14.3937,0,-13.7917	1/1:15:0,15,0:0:0:15,0:505,0:-36.3627,-4.51545,0,-36.3627,-4.51545,-36.3627	1/2:18:0,16,2:0:0:16,2:553,72:-44.7489,-6.23466,-1.41818,-38.8676,0,-38.2655	1/2:449:1,351,97:1:29:351,97:11971,3323:-1002.57,-267.496,-164.143,-733.103,0,-706.212	1/2:504:0,384,117:0:0:384,117:13269,4036:-1127.98,-327.831,-212.236,-800.149,0,-764.928	1/2:122:1,96,25:1:34:96,25:3303,835:-276.825,-64.8329,-38.6922,-209.518,0,-204.75	1/1:5:0,5,0:0:0:5,0:158,0:-12.0931,-1.50515,0,-12.0931,-1.50515,-12.0931	1/2:401:0,182,216:0:0:182,216:6319,7489:-1096.53,-608.6,-553.813,-487.947,0,-422.925	1/2:40:0,31,9:0:0:31,9:1047,316:-75.2423,-26.0696,-16.7377,-49.492,0,-46.7828	1/2:250:0,159,90:0:0:159,90:5478,3101:-515.537,-251.866,-204.003,-263.61,0,-236.518	1/2:82:0,59,23:0:0:59,23:2016,784:-180.101,-63.9486,-46.1879,-116.468,0,-109.545	1/2:109:0,90,18:0:0:90,18:2979,591:-237.53,-47.7248,-20.6321,-189.767,0,-184.349	1/2:121:0,37,83:0:0:37,83:1261,2869:-329.58,-233.24,-222.102,-96.4464,0,-71.4609	1/2:306:1,227,78:1:34:227,78:7728,2692:-685.805,-215.94,-150.364,-467.393,0,-446.671	1/2:344:0,113,229:0:0:113,229:3917,7896:-943.285,-641.393,-607.376,-301.932,0,-232.997	1/2:269:1,202,66:1:34:202,66:6959,2248:-584.413,-179.611,-121.561,-402.325,0,-385.216	1/2:291:0,221,69:0:0:221,69:7716,2401:-676.081,-195.341,-128.813,-480.839,0,-460.068	1/2:366:0,185,178:0:0:185,178:6390,6151:-997.738,-499.761,-444.07,-497.957,0,-444.373	1/2:14:0,10,4:0:0:10,4:358,144:-25.5345,-12.1095,-9.0992,-13.7346,0,-12.5305	1/2:433:0,215,215:0:0:215,215:7414,7341:-1178.66,-595.713,-530.992,-582.958,0,-518.236	1/2:60:0,27,33:0:0:27,33:923,1169:-165.914,-95.5813,-87.4535,-70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chr05	3933389	.	TATTA	TATTG,GATTG	662281	PASS	AB=0.471955,0.523647;ABP=79.1327,57.1322;AC=143,45;AF=0.760638,0.239362;AN=188;AO=18283,5879;CIGAR=4M1X,1X3M1X;DP=24264;DPB=24266;DPRA=0,1.32443;EPP=39704,12760.4;EPPR=7.35324;GTI=0;LEN=1,5;MEANALT=2.57447,3.0339;MQM=59.9809,59.8314;MQMR=60;NS=94;NUMALT=2;ODDS=9.5849;PAIRED=0,0;PAIREDR=0;PAO=4.5,5.5;PQA=149.5,185.5;PQR=0;PRO=0;QA=650334,206639;QR=72;RO=2;RPL=8423,2789;RPP=248.267,36.4748;RPPR=3.0103;RPR=9860,3090;RUN=1,1;SAF=8423,2788;SAP=248.267,36.9209;SAR=9860,3091;SRF=1;SRP=3.0103;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:85:0,34,51:0:0:34,51:1211,1771:-243.003,-144.295,-134.06,-99.0605,0,-83.708	1/1:467:0,467,0:0:0:467,0:16585,0:-1492.13,-140.581,0,-1492.13,-140.581,-1492.13	1/2:375:0,176,198:0:0:176,198:6295,6970:-1080.76,-567.454,-514.473,-513.411,0,-453.807	1/1:526:0,522,2:0:0:522,2:18521,72:-1666.18,-157.138,0,-1660.3,-151.208,-1659.7	1/1:191:0,190,0:0:0:190,0:6790,0:-610.893,-57.1957,0,-610.893,-57.1957,-610.893	1/1:160:0,158,2:0:0:158,2:5646,66:-507.93,-47.5627,0,-502.594,-41.8969,-501.992	1/2:326:0,166,159:0:0:166,159:5920,5576:-936.375,-453.792,-403.821,-482.646,0,-434.782	1/1:241:0,238,0:0:0:238,0:8427,0:-758.131,-71.6451,0,-758.131,-71.6451,-758.131	1/2:169:0,78,90:0:0:78,90:2745,3113:-476.368,-252.907,-229.426,-223.411,0,-196.318	1/1:225:0,222,0:0:0:222,0:7906,0:-711.326,-66.8287,0,-711.326,-66.8287,-711.326	1/1:167:0,167,0:0:0:167,0:5941,0:-534.8,-50.272,0,-534.8,-50.272,-534.8	1/1:188:0,187,0:0:0:187,0:6668,0:-599.946,-56.2926,0,-599.946,-56.2926,-599.946	1/2:161:0,84,77:0:0:84,77:2993,2726:-466.366,-222.405,-197.119,-244.315,0,-221.136	1/1:182:0,182,0:0:0:182,0:6459,0:-581.4,-54.7875,0,-581.4,-54.7875,-581.4	1/1:193:0,192,0:0:0:192,0:6842,0:-615.513,-57.7978,0,-615.513,-57.7978,-615.513	1/1:143:0,143,0:0:0:143,0:5093,0:-458.515,-43.0473,0,-458.515,-43.0473,-458.515	1/1:161:0,160,0:0:0:160,0:5715,0:-514.022,-48.1648,0,-514.022,-48.1648,-514.022	1/1:142:1,141,0:1:36:141,0:5002,0:-446.731,-39.148,0,-447.032,-42.4452,-449.969	1/1:95:0,95,0:0:0:95,0:3357,0:-302.348,-28.5979,0,-302.348,-28.5979,-302.348	1/2:703:0,337,363:0:0:337,363:12027,12829:-2025.29,-1044.8,-943.358,-980.494,0,-871.22	1/2:420:0,195,223:0:0:195,223:6925,7854:-1203.14,-638.88,-580.18,-564.257,0,-497.127	1/2:374:0,127,246:0:0:127,246:4520,8620:-1069.85,-701.468,-663.237,-368.446,0,-294.393	1/2:201:0,97,103:0:0:97,103:3442,3611:-574.268,-293.829,-264.629,-280.432,0,-249.426	1/1:245:0,229,15:0:0:229,15:8169,527:-734.878,-68.9359,0,-691.984,-25.9936,-687.468	1/1:217:0,216,0:0:0:216,0:7680,0:-690.989,-65.0225,0,-690.989,-65.0225,-690.989	1/1:869:0,863,3:0:0:863,3:30687,99:-2760.58,-259.789,0,-2752.57,-251.789,-2751.67	1/2:546:0,263,278:0:0:263,278:9371,9776:-1559.61,-795.774,-716.604,-763.862,0,-680.175	1/1:83:0,83,0:0:0:83,0:2960,0:-266.575,-24.9855,0,-266.575,-24.9855,-266.575	1/2:816:0,411,405:0:0:411,405:14660,14233:-2353.49,-1158.43,-1034.7,-1195.06,0,-1073.14	1/2:329:0,142,184:0:0:142,184:5041,6429:-933.685,-522.95,-480.204,-410.727,0,-355.338	1/2:257:0,128,128:0:0:128,128:4538,4507:-736.755,-367.051,-328.519,-369.837,0,-331.305	1/2:30:0,11,19:0:0:11,19:392,664:-86.3201,-54.365,-51.0537,-32.3087,0,-26.5892	1/1:61:0,61,0:0:0:61,0:2173,0:-195.836,-18.3628,0,-195.836,-18.3628,-195.836	1/2:30:0,18,12:0:0:18,12:640,410:-85.7421,-33.5782,-28.1596,-52.5108,0,-48.8984	1/1:30:0,30,0:0:0:30,0:1067,0:-96.3412,-9.0309,0,-96.3412,-9.0309,-96.3412	1/2:53:0,38,15:0:0:38,15:1349,537:-154.062,-44.1499,-32.7107,-110.269,0,-105.754	1/1:463:1,462,0:1:36:462,0:16375,0:-1469.84,-135.779,0,-1470.14,-139.076,-1473.08	1/1:468:0,464,2:0:0:464,2:16453,72:-1480.13,-139.678,0,-1474.25,-133.766,-1473.65	1/1:190:0,189,0:0:0:189,0:6706,0:-603.281,-56.8947,0,-603.281,-56.8947,-603.281	1/1:10:0,10,0:0:0:10,0:360,0:-32.7443,-3.0103,0,-32.7443,-3.0103,-32.7443	1/1:487:0,478,8:0:0:478,8:17003,270:-1529.57,-143.892,0,-1507.69,-122.012,-1505.28	1/2:77:0,38,39:0:0:38,39:1368,1373:-223.75,-112.125,-100.685,-111.982,0,-100.242	1/2:480:0,247,231:0:0:247,231:8765,8114:-1374.44,-660.306,-585.952,-714.165,0,-644.627	1/2:184:0,93,89:0:0:93,89:3315,3136:-525.641,-255.421,-227.425,-270.321,0,-243.529	1/1:169:0,169,0:0:0:169,0:6016,0:-541.547,-50.8741,0,-541.547,-50.8741,-541.547	1/2:286:0,116,169:0:0:116,169:4138,5954:-822.074,-484.745,-449.825,-337.325,0,-286.45	1/1:301:0,299,0:0:0:299,0:10611,0:-954.459,-90.008,0,-954.459,-90.008,-954.459	1/2:501:0,228,272:0:0:228,272:8102,9515:-1434.3,-774.084,-705.449,-660.207,0,-578.327	1/1:310:0,307,0:0:0:307,0:10921,0:-982.458,-92.4162,0,-982.458,-92.4162,-982.458	1/1:283:0,281,0:0:0:281,0:9987,0:-898.415,-84.5894,0,-898.415,-84.5894,-898.415	1/1:378:0,374,1:0:0:374,1:13325,36:-1198.74,-112.585,0,-1195.8,-109.632,-1195.5	1/2:43:0,14,29:0:0:14,29:496,1008:-122.708,-82.2999,-78.0855,-40.7598,0,-32.03	1/1:366:0,365,0:0:0:365,0:12996,0:-1169.12,-109.876,0,-1169.12,-109.876,-1169.12	1/1:186:0,185,0:0:0:185,0:6596,0:-593.36,-55.6906,0,-593.36,-55.6906,-593.36	1/2:43:0,20,23:0:0:20,23:712,825:-125.671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chr05	3942695	.	G	A	106812	PASS	AB=0.421279;ABP=203.353;AC=142;AF=0.755319;AN=188;AO=5174;CIGAR=1X;DP=7342;DPB=7342;DPRA=0;EPP=10842.2;EPPR=4445.35;GTI=1;LEN=1;MEANALT=1;MQM=44.5489;MQMR=59.3501;NS=94;NUMALT=1;ODDS=1.69693;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=184891;QR=77363;RO=2168;RPL=43;RPP=10867.8;RPPR=4445.35;RPR=5131;RUN=1;SAF=5171;SAP=11212.2;SAR=3;SRF=2168;SRP=4710.76;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:30,15:30:1071:15:540:-34.652,0,-83.1549	1/1:52:0,52:0:0:52:1849:-163.354,-15.6536,0	0/1:119:82,37:82:2910:37:1297:-79.4085,0,-226.177	1/1:182:0,182:0:0:182:6493:-573.923,-54.7875,0	1/1:43:0,43:0:0:43:1540:-135.991,-12.9443,0	1/1:18:0,18:0:0:18:647:-57.2917,-5.41854,0	0/1:103:46,57:46:1648:57:2040:-149.743,0,-117.266	1/1:137:0,137:0:0:137:4897:-433.946,-41.2411,0	0/1:155:71,84:71:2520:84:2989:-217.745,0,-179.643	1/1:85:0,85:0:0:85:3044:-269.179,-25.5876,0	1/1:58:0,58:0:0:58:2050:-181.715,-17.4597,0	1/1:113:0,113:0:0:113:4045:-358.117,-34.0164,0	0/1:69:35,34:35:1252:34:1224:-88.1359,0,-92.0968	1/1:61:0,61:0:0:61:2168:-191.677,-18.3628,0	1/1:63:0,63:0:0:63:2247:-199.748,-18.9649,0	1/1:61:1,60:1:36:60:2140:-185.102,-14.7646,0	1/1:30:0,30:0:0:30:1072:-95.4028,-9.0309,0	1/1:32:0,32:0:0:32:1152:-102.552,-9.63296,0	1/1:40:0,40:0:0:40:1432:-126.949,-12.0412,0	0/1:121:61,60:61:2171:60:2148:-152.284,0,-159.181	0/1:129:54,75:54:1928:75:2654:-195.678,0,-134.879	0/1:122:85,37:85:3019:37:1328:-80.9485,0,-235.048	0/1:116:73,43:73:2608:43:1548:-102.738,0,-199.874	0/1:25:6,19:6:216:19:680:-52.6078,0,-12.2648	1/1:82:0,82:0:0:82:2920:-257.511,-24.6845,0	1/1:168:0,168:0:0:168:6020:-530.796,-50.573,0	0/1:238:154,84:154:5502:84:3001:-194.327,0,-423.407	1/1:35:0,35:0:0:35:1256:-111.287,-10.5361,0	0/1:214:116,98:116:4131:98:3488:-244.752,0,-307.33	0/1:105:58,47:58:2070:47:1676:-116.703,0,-154.334	0/1:64:24,40:24:864:40:1436:-108.502,0,-58.7558	0/1:11:5,6:5:180:6:212:-15.8666,0,-13.2403	1/1:16:0,16:0:0:16:568:-50.7833,-4.81648,0	0/1:12:2,10:2:72:10:356:-28.3427,0,-3.22436	1/1:13:0,13:0:0:13:468:-41.3571,-3.91339,0	0/1:37:17,20:17:604:20:720:-52.0511,0,-43.5074	1/1:193:0,193:0:0:193:6900:-609.507,-58.0988,0	1/1:109:0,109:0:0:109:3878:-344.374,-32.8123,0	1/1:47:0,47:0:0:47:1684:-149.707,-14.1484,0	1/1:11:0,11:0:0:11:396:-35.4852,-3.31133,0	1/1:128:2,126:2:72:126:4493:-389.129,-31.6951,0	0/1:39:27,12:27:964:12:428:-26.5307,0,-75.3353	0/1:119:64,55:64:2291:55:1964:-136.254,0,-170.51	0/1:58:27,31:27:972:31:1112:-81.479,0,-70.2596	1/1:77:0,77:0:0:77:2741:-242.529,-23.1793,0	0/1:121:59,62:59:2112:62:2216:-158.845,0,-153.917	1/1:92:0,92:0:0:92:3274:-290.08,-27.6948,0	0/1:110:81,29:81:2884:29:1040:-58.9611,0,-226.546	1/1:96:1,95:1:36:95:3412:-298.532,-25.3006,0	1/1:64:0,64:0:0:64:2278:-202.007,-19.2659,0	1/1:25:0,25:0:0:25:869:-77.5485,-7.52575,0	0/1:12:6,6:6:216:6:212:-15.5655,0,-16.1782	1/1:57:0,57:0:0:57:2044:-181.644,-17.1587,0	1/1:58:0,58:0:0:58:2067:-182.767,-17.4597,0	0/1:7:3,4:3:108:4:144:-10.9068,0,-7.96796	0/1:126:73,53:73:2628:53:1896:-130.678,0,-198.781	1/1:49:0,49:0:0:49:1756:-155.624,-14.7505,0	0/1:10:8,2:8:284:2:72:-3.73188,0,-22.8694	0/1:30:25,5:25:892:5:180:-7.24166,0,-71.5676	0/1:63:32,31:32:1139:31:1108:-79.7256,0,-83.7974	0/1:115:76,39:76:2724:39:1404:-89.7768,0,-210.672	0/1:24:18,6:18:644:6:216:-11.7717,0,-51.0659	1/1:48:0,48:0:0:48:1716:-152.066,-14.4494,0	0/1:103:46,57:46:1652:57:2036:-149.179,0,-117.906	0/1:52:37,15:37:1316:15:540:-32.6062,0,-103.087	0/1:68:35,33:35:1243:33:1184:-84.8178,0,-91.7038	1/1:148:3,145:3:99:145:5164:-446.169,-35.3159,0	0/1:132:93,39:93:3332:39:1404:-84.1357,0,-260.219	0/1:68:48,20:48:1711:20:702:-41.8476,0,-133.796	1/1:39:0,39:0:0:39:1392:-123.884,-11.7402,0	0/1:37:28,9:28:995:9:320:-17.6228,0,-78.669	0/1:41:20,21:20:708:21:750:-53.84,0,-51.6395	1/1:181:0,181:0:0:181:6473:-570.639,-54.4864,0	1/1:75:1,74:1:36:74:2644:-230.83,-18.979,0	1/1:82:0,82:0:0:82:2932:-259.371,-24.6845,0	1/1:80:1,79:1:36:79:2836:-248.385,-20.4841,0	0/1:95:57,38:57:2027:38:1364:-92.3335,0,-154.048	1/1:69:0,69:0:0:69:2480:-220.335,-20.7711,0	0/1:15:6,9:6:208:9:324:-24.5824,0,-14.5199	1/1:54:2,52:2:72:52:1860:-158.349,-9.4189,0	0/1:70:39,31:39:1400:31:1097:-76.6201,0,-105.147	1/1:214:0,214:0:0:214:7665:-675.385,-64.4204,0	0/1:51:29,22:29:1040:22:788:-54.9285,0,-78.4484	0/1:73:48,25:48:1716:25:896:-57.8621,0,-132.693	1/1:38:1,37:1:32:37:1324:-114.649,-8.23983,0	0/1:142:74,68:74:2638:68:2427:-171.77,0,-194.804	0/1:17:9,8:9:316:8:284:-20.438,0,-23.6047	1/1:80:0,80:0:0:80:2868:-253.923,-24.0824,0	1/1:76:0,76:0:0:76:2732:-240.607,-22.8783,0	1/1:33:0,33:0:0:33:1184:-104.888,-9.93399,0	0/1:173:119,54:119:4231:54:1916:-118.222,0,-328.638	0/1:66:48,18:48:1715:18:648:-37.4587,0,-133.953	1/1:4:0,4:0:0:4:144:-13.1295,-1.20412,0	1/1:104:2,102:2:72:102:3668:-316.476,-24.4704,0
chr05	3942713	.	G	A	38025.3	PASS	AB=0.576574;ABP=193.898;AC=46;AF=0.244681;AN=188;AO=2170;CIGAR=1X;DP=7401;DPB=7401;DPRA=1.10566;EPP=4715.11;EPPR=11335.9;GTI=1;LEN=1;MEANALT=1;MQM=59.294;MQMR=44.6035;NS=94;NUMALT=1;ODDS=1.95525;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77687;QR=186592;RO=5231;RPL=2170;RPP=4715.11;RPPR=11362;RPR=0;RUN=1;SAF=2170;SAP=4715.11;SAR=0;SRF=5228;SRP=11335.9;SRR=3;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:14,30:14:495:30:1080:-84.2675,0,-31.0449	0/0:53:53,0:53:1895:0:0:0,-15.9546,-167.418	0/1:119:38,81:38:1364:81:2885:-223.943,0,-85.0341	0/0:182:182,0:182:6492:0:0:0,-54.7875,-573.179	0/0:43:43,0:43:1540:0:0:0,-12.9443,-135.991	0/0:18:18,0:18:633:0:0:0,-5.41854,-56.013	0/1:106:56,50:56:2004:50:1792:-129.317,0,-145.646	0/0:132:132,0:132:4735:0:0:0,-39.736,-419.684	0/1:155:87,68:87:3120:68:2423:-169.916,0,-229.223	0/0:85:85,0:85:3056:0:0:0,-25.5875,-270.165	0/0:58:58,0:58:2049:0:0:0,-17.4597,-181.663	0/0:118:118,0:118:4155:0:0:0,-35.5215,-368.794	0/1:71:34,37:34:1194:37:1327:-98.2528,0,-84.9972	0/0:60:60,0:60:2139:0:0:0,-18.0618,-189.19	0/0:62:62,0:62:2232:0:0:0,-18.6639,-198.326	0/0:62:62,0:62:2220:0:0:0,-18.6639,-195.799	0/0:29:29,0:29:1040:0:0:0,-8.72987,-92.5431	0/0:32:32,0:32:1143:0:0:0,-9.63296,-101.78	0/0:40:40,0:40:1410:0:0:0,-12.0412,-125.067	0/1:123:61,62:61:2176:62:2211:-162.177,0,-154.326	0/1:133:76,57:76:2709:57:2048:-144.414,0,-198.63	0/1:124:38,86:38:1355:86:3078:-239.788,0,-82.7681	0/1:115:44,71:44:1580:71:2556:-195.544,0,-105.899	0/1:24:19,5:19:671:5:180:-9.32734,0,-52.1187	0/0:84:84,0:84:2980:0:0:0,-25.2865,-262.719	0/0:172:172,0:172:6118:0:0:0,-51.7772,-539.837	0/1:237:85,152:85:3043:152:5429:-417.183,0,-198.358	0/0:35:35,0:35:1238:0:0:0,-10.536,-109.742	0/1:214:99,115:99:3520:115:4128:-307.058,0,-248.129	0/1:108:51,57:51:1782:57:2036:-150.374,0,-124.948	0/1:67:43,24:43:1536:24:864:-57.8527,0,-115.973	0/1:11:6,5:6:216:5:180:-13.2403,0,-16.2055	0/0:16:16,0:16:576:0:0:0,-4.81648,-51.4535	0/1:10:8,2:8:279:2:72:-3.82642,0,-22.1134	0/0:13:13,0:13:464:0:0:0,-3.91339,-41.0215	0/1:38:22,16:22:792:16:562:-39.4585,0,-58.228	0/0:189:189,0:189:6746:0:0:0,-56.8947,-595.871	0/0:113:113,0:113:4026:0:0:0,-34.0164,-357.156	0/0:47:47,0:47:1679:0:0:0,-14.1484,-149.263	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.149	0/0:131:129,2:129:4623:2:72:0,-32.5982,-400.092	0/1:39:12,27:12:428:27:972:-76.0544,0,-26.5307	0/1:118:53,65:53:1891:65:2336:-174.859,0,-131.123	0/1:63:33,30:33:1184:30:1076:-78.0226,0,-86.3613	0/0:78:78,0:78:2770:0:0:0,-23.4803,-245.155	0/1:119:61,58:61:2184:58:2084:-151.941,0,-156.332	0/0:93:93,0:93:3314:0:0:0,-27.9958,-293.618	0/1:111:28,83:28:1004:83:2958:-232.917,0,-55.4663	0/0:98:98,0:98:3515:0:0:0,-29.5009,-311.651	0/0:66:66,0:66:2334:0:0:0,-19.868,-206.953	0/0:25:25,0:25:878:0:0:0,-7.52575,-78.3158	0/1:13:6,7:6:216:7:252:-19.1109,0,-15.6034	0/0:59:59,0:59:2120:0:0:0,-17.7608,-188.323	0/0:55:55,0:55:1976:0:0:0,-16.5566,-174.624	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.6057	0/1:124:54,70:54:1920:70:2518:-189.507,0,-133.439	0/0:53:53,0:53:1883:0:0:0,-15.9546,-166.96	0/1:12:3,9:3:108:9:324:-25.8369,0,-6.32348	0/1:31:6,25:6:208:25:900:-71.9879,0,-9.45662	0/1:63:31,32:31:1112:32:1137:-83.6159,0,-80.0596	0/1:117:39,78:39:1395:78:2776:-214.748,0,-88.4028	0/1:24:6,18:6:216:18:640:-50.7046,0,-11.7717	0/0:51:51,0:51:1808:0:0:0,-15.3525,-160.252	0/1:106:59,47:59:2111:47:1680:-119.519,0,-154.699	0/1:53:16,37:16:576:37:1332:-104.227,0,-34.9843	0/1:68:33,35:33:1179:35:1260:-93.2354,0,-84.3793	0/0:150:147,3:147:5258:3:108:0,-35.0793,-453.682	0/1:133:39,94:39:1404:94:3372:-263.516,0,-83.8347	0/1:68:21,47:21:752:47:1673:-130.377,0,-46.1035	0/0:39:39,0:39:1386:0:0:0,-11.7402,-123.351	0/1:37:9,28:9:324:28:1008:-79.8359,0,-17.9597	0/1:42:20,22:20:711:22:784:-58.1142,0,-50.1716	0/0:191:191,0:191:6854:0:0:0,-57.4967,-604.809	0/0:76:75,1:75:2681:1:36:0,-19.28,-234.018	0/0:81:81,0:81:2880:0:0:0,-24.3834,-254.421	0/0:80:80,0:80:2851:0:0:0,-24.0824,-253.465	0/1:97:41,56:41:1472:56:2016:-152.457,0,-101.313	0/0:70:70,0:70:2495:0:0:0,-21.0721,-221.752	0/1:15:9,6:9:324:6:216:-15.2181,0,-24.5824	0/0:55:53,2:53:1904:2:72:0,-9.71993,-161.851	0/1:70:33,37:33:1180:37:1328:-98.6931,0,-83.9373	0/0:214:214,0:214:7684:0:0:0,-64.4204,-676.615	0/1:49:22,27:22:784:27:972:-72.9343,0,-55.1961	0/1:76:26,50:26:915:50:1780:-137.548,0,-58.7113	0/0:39:38,1:38:1345:1:36:0,-8.14189,-116.134	0/1:137:63,74:63:2242:74:2654:-197.765,0,-157.982	0/1:17:8,9:8:284:9:324:-24.3317,0,-20.438	0/0:78:78,0:78:2765:0:0:0,-23.4803,-244.971	0/0:77:77,0:77:2760:0:0:0,-23.1793,-243.635	0/0:31:31,0:31:1112:0:0:0,-9.33193,-98.5005	0/1:175:54,121:54:1843:121:4328:-336.717,0,-111.151	0/1:64:17,47:17:612:47:1668:-130.304,0,-34.8669	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.1295	0/0:105:105,0:105:3735:0:0:0,-31.6081,-329.67
chr05	3942717	.	G	A	105809	PASS	AB=0.427187;ABP=174.087;AC=142;AF=0.755319;AN=188;AO=5224;CIGAR=1X;DP=7368;DPB=7368;DPRA=0;EPP=11320.7;EPPR=4645.62;GTI=1;LEN=1;MEANALT=1.06383;MQM=44.559;MQMR=59.3639;NS=94;NUMALT=1;ODDS=2.6844;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=186547;QR=75817;RO=2138;RPL=5224;RPP=11346.8;RPPR=4645.62;RPR=0;RUN=1;SAF=5221;SAP=11320.7;SAR=3;SRF=2138;SRP=4645.62;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:30,15:30:1068:15:536:-34.3167,0,-82.8856	1/1:54:0,54:0:0:54:1912:-168.992,-16.2556,0	0/1:120:80,39:80:2864:39:1400:-87.9854,0,-221.853	1/1:182:0,182:0:0:182:6482:-573.482,-54.7875,0	1/1:43:0,43:0:0:43:1548:-136.658,-12.9443,0	1/1:18:0,18:0:0:18:648:-57.3154,-5.41854,0	0/1:105:49,56:49:1732:56:2012:-146.676,0,-124.239	1/1:133:0,133:0:0:133:4764:-422.185,-40.037,0	0/1:155:69,86:69:2463:86:3076:-225.369,0,-173.822	1/1:85:0,85:0:0:85:3044:-269.287,-25.5876,0	1/1:54:0,54:0:0:54:1901:-169.135,-16.2556,0	1/1:120:0,120:0:0:120:4277:-379.301,-36.1236,0	0/1:67:34,33:34:1212:33:1165:-83.522,0,-89.1564	1/1:63:1,62:1:36:62:2216:-191.823,-15.3666,0	1/1:63:0,63:0:0:63:2264:-201.186,-18.9649,0	1/1:61:0,61:0:0:61:2168:-191.272,-18.3628,0	1/1:30:0,30:0:0:30:1072:-95.4028,-9.0309,0	1/1:32:0,32:0:0:32:1136:-101.216,-9.63296,0	1/1:39:1,38:1:36:38:1355:-116.503,-8.1419,0	0/1:123:61,62:61:2192:62:2209:-157.095,0,-160.468	0/1:131:55,76:55:1968:76:2706:-199.147,0,-137.876	0/1:123:84,39:84:2992:39:1396:-86.7012,0,-232.315	0/1:118:73,45:73:2599:45:1597:-106.548,0,-198.455	0/1:24:5,19:5:180:19:676:-52.6191,0,-9.32734	1/1:81:1,80:1:36:80:2849:-249.107,-21.4027,0	1/1:172:0,172:0:0:172:6163:-543.43,-51.7772,0	0/1:238:152,85:152:5386:85:3048:-198.465,0,-412.946	1/1:35:0,35:0:0:35:1256:-111.287,-10.5361,0	0/1:214:113,101:113:4011:101:3569:-251.961,0,-296.567	0/1:107:58,49:58:2084:49:1734:-121.388,0,-155.62	0/1:62:21,41:21:748:41:1460:-110.784,0,-48.9252	0/1:10:4,6:4:144:6:212:-16.1676,0,-10.3029	1/1:15:0,15:0:0:15:540:-48.2598,-4.51545,0	0/1:12:2,10:2:72:10:352:-28.0062,0,-3.22436	1/1:13:0,13:0:0:13:468:-41.3571,-3.91339,0	0/1:38:17,20:17:599:20:720:-52.3011,0,-42.8292	1/1:190:0,190:0:0:190:6791:-599.801,-57.1957,0	1/1:112:0,112:0:0:112:4016:-355.594,-33.7154,0	1/1:48:0,48:0:0:48:1720:-152.859,-14.4494,0	1/1:11:0,11:0:0:11:396:-35.4852,-3.31133,0	1/1:132:2,130:2:72:130:4660:-403.09,-32.8992,0	0/1:39:27,12:27:964:12:432:-26.8524,0,-75.3333	0/1:116:63,53:63:2212:53:1896:-131.103,0,-164.303	0/1:56:25,31:25:888:31:1108:-81.7471,0,-63.3252	1/1:79:0,79:0:0:79:2827:-250.119,-23.7814,0	0/1:122:60,62:60:2148:62:2212:-157.956,0,-156.795	1/1:95:0,95:0:0:95:3407:-301.378,-28.5979,0	0/1:110:81,28:81:2855:28:1004:-55.8104,0,-223.935	1/1:99:0,99:0:0:99:3548:-314.477,-29.802,0	1/1:65:0,65:0:0:65:2309:-204.623,-19.567,0	1/1:24:0,24:0:0:24:856:-76.3342,-7.22472,0	0/1:13:7,6:7:252:6:212:-15.2645,0,-19.1109	1/1:60:0,60:0:0:60:2140:-190.206,-18.0618,0	1/1:55:0,55:0:0:55:1968:-174.469,-16.5567,0	0/1:8:4,4:4:144:4:144:-10.6057,0,-10.9054	0/1:125:70,55:70:2484:55:1945:-135.436,0,-186.13	1/1:52:0,52:0:0:52:1852:-164.205,-15.6536,0	0/1:11:8,3:8:288:3:108:-6.62451,0,-22.9561	0/1:30:25,5:25:892:5:176:-6.9268,0,-71.5676	0/1:63:31,32:31:1100:32:1148:-83.2533,0,-80.3454	0/1:114:76,38:76:2679:38:1364:-86.5504,0,-206.927	0/1:23:18,5:18:648:5:180:-8.87714,0,-51.7282	1/1:50:0,50:0:0:50:1796:-159.12,-15.0515,0	0/1:102:47,55:47:1659:55:1953:-142.356,0,-118.83	0/1:52:36,16:36:1267:16:576:-35.2854,0,-98.6772	0/1:68:36,32:36:1273:32:1144:-81.2902,0,-94.4009	1/1:149:2,147:2:72:147:5219:-454.167,-38.0167,0	0/1:132:92,40:92:3291:40:1428:-85.816,0,-256.53	0/1:66:45,21:45:1595:21:756:-47.0401,0,-123.963	1/1:39:0,39:0:0:39:1388:-123.551,-11.7402,0	0/1:36:27,9:27:959:9:324:-18.2607,0,-75.7321	0/1:41:20,21:20:697:21:752:-53.7177,0,-50.6485	1/1:188:0,188:0:0:188:6731:-594.526,-56.5936,0	1/1:75:1,74:1:36:74:2643:-230.729,-18.979,0	1/1:81:3,77:3:108:77:2764:-235.068,-14.9806,0	1/1:81:0,81:0:0:81:2881:-256.123,-24.3834,0	0/1:98:57,41:57:2006:41:1464:-100.344,0,-151.253	1/1:70:0,70:0:0:70:2497:-221.84,-21.0721,0	0/1:13:5,8:5:172:8:288:-21.9908,0,-11.8474	1/1:54:2,52:2:72:52:1868:-158.718,-9.4189,0	0/1:72:38,34:38:1321:34:1212:-86.2119,0,-97.5021	1/1:214:0,214:0:0:214:7635:-673.21,-64.4204,0	0/1:47:25,22:25:892:22:788:-56.1326,0,-66.3381	0/1:74:49,25:49:1731:25:896:-57.5611,0,-133.741	1/1:39:1,38:1:32:38:1356:-117.502,-8.54086,0	0/1:140:73,67:73:2565:67:2383:-168.301,0,-188.84	0/1:16:8,8:8:258:8:284:-20.739,0,-18.6598	1/1:80:0,80:0:0:80:2838:-251.814,-24.0824,0	1/1:77:0,76:0:0:76:2713:-239.138,-22.8783,0	1/1:32:0,32:0:0:32:1148:-101.694,-9.63296,0	0/1:170:116,54:116:4060:54:1924:-119.447,0,-314.185	0/1:66:48,18:48:1703:18:648:-37.4587,0,-132.818	1/1:4:0,4:0:0:4:144:-13.1295,-1.20412,0	1/1:105:0,105:0:0:105:3756:-331.71,-31.6082,0
chr05	4276150	.	A	G	164568	PASS	AB=0.49988;ABP=3.01082;AC=142;AF=0.755319;AN=188;AO=7705;CIGAR=1X;DP=9801;DPB=9801;DPRA=16.3679;EPP=16725.5;EPPR=4541.39;GTI=2;LEN=1;MEANALT=1.02174;MQM=59.9896;MQMR=59.9962;NS=94;NUMALT=1;ODDS=0.362402;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=274810;QR=74757;RO=2094;RPL=0;RPP=16734.2;RPPR=4541.39;RPR=7705;RUN=1;SAF=7704;SAP=16725.5;SAR=1;SRF=2094;SRP=4550.07;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:19:9,10:9:324:10:360:-27.0247,0,-23.7863	1/1:128:0,128:0:0:128:4556:-410.206,-38.5318,0	0/1:141:73,67:73:2582:67:2404:-174.112,0,-190.115	1/1:120:0,120:0:0:120:4279:-385.287,-36.1236,0	1/1:74:1,73:1:36:73:2608:-231.37,-18.6779,0	1/1:73:0,73:0:0:73:2620:-236.047,-21.9752,0	0/1:153:78,75:78:2784:75:2662:-193.766,0,-204.744	1/1:132:0,132:0:0:132:4690:-422.26,-39.736,0	0/1:75:38,37:38:1360:37:1320:-96.5247,0,-100.123	1/1:78:0,78:0:0:78:2804:-252.599,-23.4803,0	1/1:98:0,98:0:0:98:3491:-314.402,-29.5009,0	1/1:82:0,82:0:0:82:2931:-264.024,-24.6845,0	0/1:67:28,39:28:996:39:1388:-105.05,0,-69.7859	1/1:126:0,126:0:0:126:4472:-402.65,-37.9298,0	1/1:64:0,64:0:0:64:2285:-205.91,-19.2659,0	1/1:65:0,65:0:0:65:2336:-210.499,-19.567,0	1/1:97:0,97:0:0:97:3469:-312.333,-29.1999,0	1/1:55:0,55:0:0:55:1972:-177.755,-16.5567,0	1/1:47:0,47:0:0:47:1683:-151.756,-14.1484,0	0/1:240:130,110:130:4656:110:3929:-281.554,0,-346.955	1/1:135:0,135:0:0:135:4799:-432.066,-40.6391,0	0/1:98:60,38:60:2152:38:1352:-92.4794,0,-164.446	0/1:63:31,32:31:1112:32:1148:-84.6649,0,-81.4265	1/1:111:0,111:0:0:111:3947:-355.419,-33.4143,0	1/1:72:0,72:0:0:72:2539:-228.758,-21.6742,0	1/1:297:0,297:0:0:297:10616:-955.349,-89.4059,0	0/1:232:103,129:103:3658:129:4573:-341.895,0,-259.584	1/1:30:0,30:0:0:30:1076:-97.1482,-9.0309,0	0/1:329:149,180:149:5313:180:6403:-477.32,0,-379.266	0/1:156:84,72:84:3000:72:2573:-184.859,0,-223.271	1/1:161:0,161:0:0:161:5728:-515.625,-48.4658,0	0/1:11:2,9:2:72:9:309:-24.8294,0,-3.52539	1/1:20:0,20:0:0:20:703:-63.5935,-6.0206,0	0/1:6:4,2:4:144:2:63:-4.17697,0,-11.5074	1/1:26:0,26:0:0:26:921:-83.2052,-7.82678,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:171:0,171:0:0:171:6123:-551.169,-51.4761,0	1/1:293:0,293:0:0:293:10380:-934.125,-88.2018,0	1/1:89:0,89:0:0:89:3179:-286.333,-26.7917,0	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	1/1:129:1,128:1:36:128:4581:-408.855,-35.2346,0	0/1:38:23,15:23:824:15:536:-37.1357,0,-63.0442	0/1:131:63,67:63:2234:67:2408:-177.482,0,-161.827	0/1:73:39,34:39:1400:34:1205:-86.7787,0,-104.324	1/1:65:0,65:0:0:65:2298:-207.075,-19.567,0	0/1:125:64,61:64:2273:61:2184:-159.197,0,-167.202	1/1:115:0,115:0:0:115:4097:-368.915,-34.6185,0	0/1:206:94,112:94:3364:112:3950:-293.679,0,-240.964	1/1:134:0,134:0:0:134:4768:-429.277,-40.338,0	1/1:133:0,133:0:0:133:4772:-429.636,-40.037,0	1/1:116:0,116:0:0:116:4152:-373.863,-34.9195,0	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	1/1:152:1,151:1:36:151:5401:-482.621,-42.1583,0	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	0/1:21:6,15:6:216:15:540:-42.6149,0,-13.4689	0/1:157:68,89:68:2428:89:3184:-239.522,0,-171.514	1/1:45:0,45:0:0:45:1586:-143.026,-13.5464,0	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:97:34,63:34:1220:63:2246:-173.201,0,-80.9069	0/1:163:87,76:87:3124:76:2732:-197.054,0,-232.318	0/1:6:5,1:5:180:1:32:-1.39313,0,-14.7459	1/1:209:0,209:0:0:209:7466:-671.982,-62.9153,0	0/1:228:103,125:103:3669:125:4450:-332.035,0,-261.778	0/1:44:22,22:22:788:22:777:-57.0059,0,-57.9995	0/1:88:39,49:39:1396:49:1743:-130.664,0,-99.4485	1/1:171:1,170:1:36:170:6096:-545.142,-47.8779,0	0/1:113:81,32:81:2904:32:1152:-69.9738,0,-227.579	0/1:75:38,37:38:1368:37:1332:-97.6051,0,-100.844	1/1:77:0,77:0:0:77:2733:-246.21,-23.1793,0	0/1:77:42,35:42:1500:35:1260:-90.5262,0,-112.115	0/1:28:21,7:21:741:7:252:-14.6001,0,-58.5828	1/1:106:0,106:0:0:106:3760:-338.601,-31.9092,0	1/1:73:0,73:0:0:73:2620:-236.047,-21.9752,0	1/1:196:0,196:0:0:196:6989:-629.073,-59.0019,0	1/1:195:0,195:0:0:195:6959:-626.37,-58.7009,0	0/1:110:56,54:56:1989:54:1925:-140.412,0,-146.169	1/1:121:0,121:0:0:121:4311:-388.167,-36.4246,0	0/1:19:11,8:11:377:8:288:-20.5478,0,-28.5384	1/1:126:0,126:0:0:126:4470:-402.449,-37.9298,0	0/1:129:71,58:71:2514:58:2070:-147.737,0,-187.677	1/1:230:0,230:0:0:230:8209:-738.824,-69.2369,0	0/1:106:52,54:52:1860:54:1932:-142.247,0,-135.77	0/1:91:44,47:44:1569:47:1688:-124.813,0,-114.106	1/1:91:0,91:0:0:91:3264:-293.98,-27.3937,0	0/1:144:60,84:60:2156:84:2978:-224.903,0,-150.959	0/1:33:21,12:21:756:12:432:-29.2872,0,-58.4332	1/1:74:0,74:0:0:74:2652:-238.926,-22.2762,0	1/1:77:0,77:0:0:77:2749:-247.651,-23.1793,0	1/1:78:0,78:0:0:78:2796:-251.88,-23.4803,0	0/1:190:98,92:98:3505:92:3248:-235.345,0,-258.463	0/1:56:38,18:38:1353:18:648:-41.7942,0,-105.211	1/1:119:0,119:0:0:119:4242:-381.957,-35.8226,0	1/1:107:0,107:0:0:107:3840:-345.795,-32.2102,0
chr05	4410279	.	GTCG	ATCA	24842.1	PASS	AB=0.482081;ABP=11.8043;AC=44;AF=0.234043;AN=188;AO=1534;CIGAR=1X2M1X;DP=7449;DPB=7448.25;DPRA=1.1257;EPP=3334.05;EPPR=12699.7;GTI=1;LEN=4;MEANALT=1.32075;MQM=59.9654;MQMR=59.9971;NS=94;NUMALT=1;ODDS=0.986925;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=54547;QR=207252;RO=5883;RPL=0;RPP=3334.05;RPPR=12699.7;RPR=1534;RUN=1;SAF=1534;SAP=3334.05;SAR=0;SRF=5883;SRP=12777.8;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:22,21:22:775:21:732:-53.255,0,-57.1267	0/0:72:71,1:71:2489:1:36:0,-18.0759,-220.665	0/1:124:80,43:80:2790:43:1509:-98.7154,0,-213.954	0/0:207:205,2:205:7241:2:66:0,-56.0453,-645.483	0/0:35:33,1:33:1163:1:36:0,-6.99657,-101.378	0/0:54:53,1:53:1888:1:36:0,-12.6573,-166.6	0/1:116:66,50:66:2341:50:1753:-123.132,0,-176.029	0/0:157:155,0:155:5467:0:0:0,-46.6596,-491.805	0/1:90:58,32:58:2026:32:1118:-73.8335,0,-155.518	0/0:99:98,0:98:3441:0:0:0,-29.5009,-309.545	0/0:34:34,0:34:1192:0:0:0,-10.235,-107.584	0/0:80:80,0:80:2799:0:0:0,-24.0824,-252.15	0/1:58:23,34:23:792:34:1202:-90.9646,0,-54.0758	0/0:59:59,0:59:2085:0:0:0,-17.7608,-187.92	0/0:42:42,0:42:1501:0:0:0,-12.6433,-135.385	0/0:30:29,0:29:1031:0:0:0,-8.72987,-92.7439	0/0:26:26,0:26:931:0:0:0,-7.82678,-84.1089	0/0:35:35,0:35:1239:0:0:0,-10.536,-111.813	0/0:18:18,0:18:630:0:0:0,-5.41854,-57.0246	0/1:238:114,123:114:4035:123:4384:-323.188,0,-291.795	0/0:150:149,0:149:5225:0:0:0,-44.8535,-470.034	0/1:90:26,64:26:905:64:2249:-175.58,0,-54.6711	0/1:78:43,35:43:1518:35:1237:-88.1537,0,-113.431	0/0:63:63,0:63:2211:0:0:0,-18.9649,-199.254	0/0:49:48,0:48:1679:0:0:0,-14.4494,-151.034	0/0:293:290,1:290:10172:1:36:0,-84.3613,-911.83	0/1:198:118,80:118:4186:80:2846:-196.771,0,-317.318	0/0:18:18,0:18:633:0:0:0,-5.41854,-57.2961	0/1:148:76,71:76:2677:71:2532:-183.506,0,-196.564	0/1:168:88,77:88:3078:77:2751:-197.806,0,-227.221	0/0:103:103,0:103:3625:0:0:0,-31.0061,-326.458	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	0/0:9:9,0:9:323:0:0:0,-2.70927,-29.4151	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:6:6,0:6:210:0:0:0,-1.80618,-19.2417	0/1:4:1,3:1:30:3:102:-8.31226,0,-1.79545	0/0:124:123,0:123:4370:0:0:0,-37.0267,-393.117	0/0:166:164,2:164:5744:2:72:0,-43.1343,-510.247	0/0:25:25,0:25:874:0:0:0,-7.52575,-78.9759	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:130:127,3:127:4467:3:108:0,-29.0587,-392.128	0/1:15:8,7:8:286:7:251:-18.4224,0,-21.5701	0/1:162:109,53:109:3825:53:1899:-122.421,0,-295.684	0/1:27:10,16:10:353:16:565:-42.9943,0,-23.9226	0/0:42:42,0:42:1496:0:0:0,-12.6433,-134.932	0/1:98:51,47:51:1810:47:1668:-120.906,0,-133.68	0/0:116:116,0:116:4053:0:0:0,-34.9195,-364.962	0/1:167:89,77:89:3119:77:2740:-196.512,0,-230.606	0/0:90:90,0:90:3186:0:0:0,-27.0927,-286.966	0/0:136:134,0:134:4704:0:0:0,-40.338,-423.186	0/0:147:144,1:144:5098:1:36:0,-40.4109,-455.37	0/1:13:2,10:2:60:10:351:-27.9952,0,-1.7793	0/0:120:120,0:120:4266:0:0:0,-36.1236,-384.121	0/0:90:90,0:90:3182:0:0:0,-27.0927,-286.606	0/1:8:4,4:4:133:4:134:-9.98181,0,-9.88935	0/1:138:65,72:65:2291:72:2571:-190.039,0,-164.851	0/0:61:61,0:61:2129:0:0:0,-18.3628,-191.877	0/1:5:3,2:3:100:2:72:-5.33157,0,-7.82471	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:70:35,35:35:1220:35:1246:-91.3725,0,-89.0288	0/1:54:29,25:29:1033:25:893:-64.4338,0,-77.0279	0/1:6:5,1:5:165:1:36:-1.79209,0,-13.3683	0/0:77:77,0:77:2736:0:0:0,-23.1793,-246.483	0/1:130:74,56:74:2590:56:1987:-139.97,0,-194.215	0/1:77:44,32:44:1557:32:1144:-80.0306,0,-117.183	0/1:59:35,24:35:1210:24:858:-59.7807,0,-91.4392	0/0:158:156,2:156:5489:2:68:0,-41.105,-487.685	0/1:98:38,59:38:1306:59:2101:-159.799,0,-88.2763	0/1:33:14,19:14:480:19:677:-51.3241,0,-33.5909	0/1:76:31,45:31:1108:45:1611:-122.402,0,-77.1531	0/1:25:10,15:10:360:15:531:-40.5966,0,-25.2186	0/1:12:8,4:8:286:4:140:-9.33222,0,-22.4731	0/0:162:161,0:161:5653:0:0:0,-48.4658,-508.686	0/0:97:97,0:97:3446:0:0:0,-29.1999,-310.354	0/0:78:78,0:78:2744:0:0:0,-23.4803,-247.201	0/0:149:149,0:149:5308:0:0:0,-44.8535,-477.857	0/1:101:46,54:46:1604:54:1938:-144.283,0,-114.233	0/0:154:154,0:154:5433:0:0:0,-46.3586,-489.105	0/1:14:4,10:4:144:10:359:-28.4392,0,-9.0992	0/0:131:129,0:129:4554:0:0:0,-38.8329,-409.67	0/1:54:23,31:23:780:31:1101:-83.138,0,-54.2567	0/0:183:183,0:183:6446:0:0:0,-55.0885,-580.229	0/1:31:17,14:17:601:14:504:-36.3662,0,-45.0877	0/1:42:23,19:23:811:19:679:-48.7957,0,-60.6656	0/0:20:20,0:20:701:0:0:0,-6.0206,-63.4122	0/1:91:51,40:51:1794:40:1439:-102.414,0,-134.346	0/1:26:15,11:15:540:11:390:-27.6117,0,-41.1098	0/0:56:56,0:56:1985:0:0:0,-16.8577,-178.924	0/0:42:42,0:42:1494:0:0:0,-12.6433,-134.754	0/0:34:34,0:34:1218:0:0:0,-10.235,-109.927	0/1:80:41,39:41:1467:39:1391:-101.407,0,-108.244	0/1:59:9,50:9:314:50:1786:-143.262,0,-10.8357	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.208	0/0:56:55,0:55:1946:0:0:0,-16.5566,-175.055
chr05	4669921	.	GAACGGT	GAATGGT,AAATGGT	163547	PASS	AB=0.394373,0.593862;ABP=381.922,302.216;AC=140,48;AF=0.744681,0.255319;AN=188;AO=5308,2346;CIGAR=3M1X3M,1X2M1X3M;DP=7744;DPB=7744;DPRA=10.5,1.15786;EPP=11520.5,5097.28;EPPR=5.18177;GTI=3;LEN=1,7;MEANALT=2.32609,2.78431;MQM=59.9898,59.9297;MQMR=60;NS=94;NUMALT=2;ODDS=0.526498;PAIRED=0,0;PAIREDR=0;PAO=0.333333,0;PQA=0,0;PQR=0;PRO=0.333333;QA=189713,82818;QR=31;RO=1;RPL=5308,2346;RPP=11529.2,5097.28;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=1,0;SAP=11520.5,5097.28;SAR=5307,2346;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:47:0,9,38:0:0:9,38:324,1332:-135.178,-108.74,-106.03,-26.7966,0,-15.3574	1/1:38:0,38,0:0:0:38,0:1364,0:-123.061,-11.4391,0,-123.061,-11.4391,-123.061	1/2:172:0,55,114:0:0:55,114:1980,4044:-491.072,-329.512,-312.955,-161.596,0,-127.278	1/1:226:0,222,0:0:0:222,0:7924,0:-712.868,-66.8287,0,-712.868,-66.8287,-712.868	1/1:60:0,59,0:0:0:59,0:2070,0:-186.293,-17.7608,0,-186.293,-17.7608,-186.293	1/1:39:0,39,0:0:0:39,0:1400,0:-126.299,-11.7402,0,-126.299,-11.7402,-126.299	1/2:49:0,21,28:0:0:21,28:756,986:-142.299,-80.6102,-74.2886,-62.0456,0,-53.6168	1/1:109:0,104,4:0:0:104,4:3698,138:-332.667,-31.3071,0,-321.456,-20.1083,-320.252	1/2:87:0,45,41:0:0:45,41:1605,1437:-247.813,-116.974,-103.428,-130.891,0,-118.548	1/1:49:0,49,0:0:0:49,0:1741,0:-156.972,-14.7505,0,-156.972,-14.7505,-156.972	1/1:43:0,43,0:0:0:43,0:1540,0:-138.891,-12.9443,0,-138.891,-12.9443,-138.891	1/1:89:0,87,0:0:0:87,0:3113,0:-280.04,-26.1896,0,-280.04,-26.1896,-280.04	1/2:78:0,38,40:0:0:38,40:1340,1428:-225.88,-116.777,-105.338,-109.458,0,-97.4169	1/1:36:0,35,0:0:0:35,0:1256,0:-112.995,-10.5361,0,-112.995,-10.5361,-112.995	1/1:71:0,71,0:0:0:71,0:2548,0:-229.57,-21.3731,0,-229.57,-21.3731,-229.57	1/1:40:0,40,0:0:0:40,0:1432,0:-129.178,-12.0412,0,-129.178,-12.0412,-129.178	1/1:23:0,23,0:0:0:23,0:828,0:-74.8441,-6.92369,0,-74.8441,-6.92369,-74.8441	1/1:43:0,43,0:0:0:43,0:1533,0:-138.26,-12.9443,0,-138.26,-12.9443,-138.26	1/1:20:0,20,0:0:0:20,0:716,0:-64.7677,-6.0206,0,-64.7677,-6.0206,-64.7677	1/2:212:0,106,97:0:0:106,97:3789,3470:-591.915,-282.974,-251.065,-308.96,0,-279.76	1/1:127:0,127,0:0:0:127,0:4548,0:-409.486,-38.2308,0,-409.486,-38.2308,-409.486	1/2:162:0,39,121:0:0:39,121:1400,4270:-461.9,-347.698,-335.958,-114.199,0,-77.7746	1/2:93:0,48,45:0:0:48,45:1716,1574:-268.325,-128.402,-113.953,-140.276,0,-126.73	1/1:50:0,47,0:0:0:47,0:1680,0:-151.149,-14.1484,0,-151.149,-14.1484,-151.149	1/1:53:0,51,0:0:0:51,0:1836,0:-165.257,-15.3525,0,-165.257,-15.3525,-165.257	1/1:177:0,176,0:0:0:176,0:6247,0:-562.075,-52.9813,0,-562.075,-52.9813,-562.075	1/2:158:0,75,82:0:0:75,82:2680,2896:-454.415,-235.902,-213.324,-218.577,0,-193.893	1/1:32:0,32,0:0:0:32,0:1148,0:-103.63,-9.63296,0,-103.63,-9.63296,-103.63	1/2:374:0,127,244:0:0:127,244:4526,8630:-1071.6,-702.68,-664.449,-368.974,0,-295.522	1/2:181:0,61,116:0:0:61,116:2188,4124:-514.598,-336.132,-317.769,-178.526,0,-143.607	1/1:100:0,100,0:0:0:100,0:3580,0:-322.321,-30.103,0,-322.321,-30.103,-322.321	1/2:27:0,5,22:0:0:5,22:180,784:-78.9489,-64.2612,-62.756,-15.0469,0,-8.42425	1/1:24:0,24,0:0:0:24,0:860,0:-77.7218,-7.22472,0,-77.7218,-7.22472,-77.7218	2/2:11:0,0,11:0:0:0,11:0,382:-34.7124,-34.7124,-34.7124,-3.31133,-3.31133,0	1/1:24:0,22,0:0:0:22,0:791,0:-71.1649,-6.62266,0,-71.1649,-6.62266,-71.1649	1/2:43:0,5,38:0:0:5,38:180,1342:-124.327,-109.639,-108.134,-15.0469,0,-3.60777	1/1:176:0,176,0:0:0:176,0:6311,0:-568.08,-52.9813,0,-568.08,-52.9813,-568.08	1/1:104:0,102,1:0:0:102,1:3645,35:-327.937,-30.7051,0,-325.09,-27.8224,-324.789	1/1:27:0,27,0:0:0:27,0:968,0:-87.4374,-8.12781,0,-87.4374,-8.12781,-87.4374	2/2:5:0,0,5:0:0:0,5:0,180:-16.5521,-16.5521,-16.5521,-1.50515,-1.50515,0	1/2:202:0,73,125:0:0:73,125:2616,4424:-573.737,-360.38,-338.405,-213.387,0,-175.758	1/2:34:0,22,12:0:0:22,12:792,432:-100.232,-35.6088,-28.9862,-64.983,0,-61.3707	1/2:126:0,35,90:0:0:35,90:1241,3176:-359.793,-258.69,-248.154,-101.174,0,-74.0817	1/2:52:0,27,24:0:0:27,24:972,856:-149.108,-69.7955,-61.6677,-79.3295,0,-72.1048	1/1:55:0,50,0:0:0:50,0:1792,0:-161.261,-15.0515,0,-161.261,-15.0515,-161.261	1/2:91:0,50,40:0:0:50,40:1796,1388:-259.33,-112.812,-97.7606,-146.511,0,-134.47	1/1:107:0,104,1:0:0:104,1:3724,36:-335.027,-31.3071,0,-332.09,-28.3564,-331.789	1/2:201:0,90,110:0:0:90,110:3209,3883:-577.818,-316.233,-289.14,-261.619,0,-228.506	1/1:114:0,112,0:0:0:112,0:3983,0:-358.346,-33.7154,0,-358.346,-33.7154,-358.346	1/1:76:0,75,0:0:0:75,0:2692,0:-242.293,-22.5773,0,-242.293,-22.5773,-242.293	1/1:105:0,105,0:0:0:105,0:3768,0:-339.318,-31.6082,0,-339.318,-31.6082,-339.318	1/2:17:0,10,7:0:0:10,7:356,244:-49.2114,-20.1919,-17.1816,-29.3709,0,-27.2637	1/1:108:0,107,0:0:0:107,0:3829,0:-344.564,-32.2102,0,-344.564,-32.2102,-344.564	1/1:21:0,21,0:0:0:21,0:752,0:-68.0063,-6.32163,0,-68.0063,-6.32163,-68.0063	1/2:7:0,3,4:0:0:3,4:108,144:-20.9217,-12.1095,-11.2064,-9.17208,0,-7.96796	1/2:145:0,61,84:0:0:61,84:2192,2930:-417.472,-238.645,-220.282,-179.183,0,-153.896	1/1:37:0,35,0:0:0:35,0:1256,0:-113.023,-10.5361,0,-113.023,-10.5361,-113.023	1/2:24:0,13,11:0:0:13,11:468,394:-70.6777,-32.4902,-28.5769,-38.5463,0,-35.2349	1/2:5:0,1,4:0:0:1,4:36,144:-15.0469,-12.1095,-11.8085,-3.29724,0,-2.09312	1/2:47:0,22,25:0:0:22,25:788,872:-135.537,-71.2689,-64.6462,-64.6221,0,-57.0964	1/2:87:1,42,43:1:31:42,43:1503,1535:-244.976,-122.713,-112.557,-120.135,0,-109.678	1/2:8:0,3,5:0:0:3,5:108,180:-23.8592,-15.0469,-14.1438,-9.17208,0,-7.66693	1/1:155:0,155,0:0:0:155,0:5503,0:-495.396,-46.6597,0,-495.396,-46.6597,-495.396	1/2:145:0,53,90:0:0:53,90:1892,3150:-410.608,-256.358,-240.403,-154.326,0,-127.233	1/2:49:0,26,23:0:0:26,23:909,811:-140.332,-66.3865,-58.5598,-74.2966,0,-67.3729	1/2:142:0,40,102:0:0:40,102:1421,3581:-407.586,-291.796,-279.755,-116.144,0,-85.4392	1/1:92:0,91,0:0:0:91,0:3268,0:-294.039,-27.3937,0,-294.039,-27.3937,-294.039	1/2:163:0,34,127:0:0:34,127:1220,4489:-465.13,-365.615,-355.38,-99.5781,0,-61.3473	1/2:32:0,17,13:0:0:17,13:612,466:-87.9659,-38.0274,-32.9098,-49.9584,0,-46.045	1/2:35:0,22,12:0:0:22,12:788,432:-99.5896,-35.3227,-28.7001,-64.3388,0,-60.7264	1/2:26:0,13,13:0:0:13,13:464,467:-76.282,-38.4558,-34.5424,-38.1841,0,-34.2707	1/2:4:0,2,2:0:0:2,2:72,60:-11.001,-5.0962,-4.49414,-6.23466,0,-5.6326	1/1:81:0,81,0:0:0:81,0:2888,0:-260.157,-24.3834,0,-260.157,-24.3834,-260.157	1/1:55:0,52,0:0:0:52,0:1838,0:-165.377,-15.6536,0,-165.377,-15.6536,-165.377	1/1:62:0,62,0:0:0:62,0:2228,0:-200.776,-18.6639,0,-200.776,-18.6639,-200.776	1/1:161:0,157,0:0:0:157,0:5625,0:-506.038,-47.2617,0,-506.038,-47.2617,-506.038	1/2:72:0,36,35:0:0:36,35:1292,1229:-205.506,-100.113,-89.2763,-105.484,0,-94.948	1/1:81:0,80,0:0:0:80,0:2872,0:-258.406,-24.0824,0,-258.406,-24.0824,-258.406	1/2:17:0,7,10:0:0:7,10:237,343:-47.402,-28.1904,-26.0832,-19.5518,0,-16.5415	1/1:124:0,122,1:0:0:122,1:4388,36:-394.766,-36.7257,0,-391.828,-33.7533,-391.527	1/2:89:0,22,67:0:0:22,67:792,2346:-255.855,-191.229,-184.606,-64.983,0,-44.814	1/1:196:0,193,0:0:0:193,0:6892,0:-620.08,-58.0988,0,-620.08,-58.0988,-620.08	1/2:37:0,22,13:0:0:22,13:784,456:-101.018,-37.1095,-30.4869,-63.911,0,-59.9976	1/2:67:0,33,33:0:0:33,33:1184,1181:-192.88,-96.3042,-86.3702,-96.5745,0,-86.6405	1/1:50:0,50,0:0:0:50,0:1788,0:-161.203,-15.0515,0,-161.203,-15.0515,-161.203	1/2:137:0,73,64:0:0:73,64:2612,2243:-395.865,-182.866,-160.891,-213.353,0,-194.087	1/2:23:0,10,13:0:0:10,13:360,467:-67.8303,-38.4558,-35.4455,-29.734,0,-25.8206	1/1:76:0,76,0:0:0:76,0:2702,0:-243.424,-22.8783,0,-243.424,-22.8783,-243.424	1/1:71:0,71,0:0:0:71,0:2548,0:-229.57,-21.3731,0,-229.57,-21.3731,-229.57	1/1:54:0,54,0:0:0:54,0:1940,0:-174.876,-16.2556,0,-174.876,-16.2556,-174.876	1/2:64:0,23,40:0:0:23,40:820,1429:-183.404,-116.561,-109.638,-66.8965,0,-54.8553	1/2:79:0,23,55:0:0:23,55:824,1906:-222.142,-154.937,-148.014,-67.2381,0,-50.6815	1/1:46:0,46,0:0:0:46,0:1618,0:-145.905,-13.8474,0,-145.905,-13.8474,-145.905	1/1:111:0,110,1:0:0:110,1:3910,36:-351.732,-33.1133,0,-348.795,-29.8161,-348.494
chr05	4809497	.	A	G	41748	PASS	AB=0.497576;ABP=3.26298;AC=47;AF=0.25;AN=188;AO=2477;CIGAR=1X;DP=10974;DPB=10974;DPRA=0.968172;EPP=5321.12;EPPR=18287.2;GTI=3;LEN=1;MEANALT=1.01724;MQM=59.5684;MQMR=59.9832;NS=94;NUMALT=1;ODDS=1.09525;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88417;QR=304353;RO=8496;RPL=7;RPP=5321.12;RPPR=18304.5;RPR=2470;RUN=1;SAF=0;SAP=5381.75;SAR=2477;SRF=2;SRP=18434.5;SRR=8494;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:25,26:25:892:26:936:-69.1042,0,-65.2472	0/0:97:97,0:97:3468:0:0:0,-29.1999,-312.332	0/1:180:96,84:96:3437:84:3008:-216.723,0,-255.356	0/0:250:250,0:250:8947:0:0:0,-75.2575,-805.205	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:72:72,0:72:2592:0:0:0,-21.6742,-233.528	0/1:182:112,70:112:4015:70:2499:-170.37,0,-306.75	0/0:175:175,0:175:6249:0:0:0,-52.6802,-562.497	0/1:148:70,78:70:2493:78:2780:-205.844,0,-180.069	0/0:98:98,0:98:3516:0:0:0,-29.5009,-316.649	0/0:93:92,1:92:3283:1:36:0,-24.3975,-292.09	0/1:89:45,44:45:1608:44:1569:-114.692,0,-118.218	0/1:99:46,53:46:1652:53:1876:-139.298,0,-119.167	0/0:117:117,0:117:4192:0:0:0,-35.2205,-377.461	0/0:84:84,0:84:3001:0:0:0,-25.2865,-270.32	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.692	0/0:85:85,0:85:3044:0:0:0,-25.5875,-274.19	0/0:86:86,0:86:3080:0:0:0,-25.8886,-277.428	0/0:57:55,2:55:1972:2:72:0,-10.322,-170.918	0/1:218:113,105:113:4034:105:3768:-273.68,0,-297.621	0/0:176:175,1:175:6280:1:36:0,-49.383,-561.693	0/1:129:44,85:44:1584:85:3035:-234.053,0,-104.019	0/1:123:63,60:63:2264:60:2127:-154.414,0,-166.996	0/0:124:124,0:124:4435:0:0:0,-37.3277,-399.321	0/0:72:72,0:72:2569:0:0:0,-21.6742,-231.458	0/0:352:352,0:352:12591:0:0:0,-105.963,-1132	0/1:217:101,116:101:3616:116:4148:-308.103,0,-260.32	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:332:177,155:177:6344:155:5552:-399.853,0,-471.108	0/1:122:77,45:77:2753:45:1605:-107.985,0,-211.285	0/0:151:150,1:150:5376:1:32:0,-42.2562,-480.772	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/0:4:4,0:4:136:0:0:0,-1.20412,-12.5755	0/1:25:12,13:12:432:13:464:-34.5718,0,-31.6954	0/0:198:198,0:198:7103:0:0:0,-59.6039,-639.326	0/0:190:190,0:190:6797:0:0:0,-57.1957,-611.801	0/0:99:99,0:99:3552:0:0:0,-29.802,-319.888	0/1:9:7,2:7:252:2:72:-4.12261,0,-20.3197	0/1:251:125,126:125:4484:126:4497:-329.312,0,-328.17	0/1:68:33,35:33:1179:35:1252:-92.5132,0,-85.9472	0/1:85:47,38:47:1680:38:1351:-96.1272,0,-125.9	0/1:112:59,53:59:2124:53:1900:-137.56,0,-157.713	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.806	0/1:150:79,70:79:2835:70:2486:-178.729,0,-210.322	0/0:117:117,0:117:4204:0:0:0,-35.2205,-378.539	0/1:192:91,101:91:3257:101:3620:-268.192,0,-235.551	0/0:163:163,0:163:5864:0:0:0,-49.0679,-527.867	0/0:169:169,0:169:6067:0:0:0,-50.8741,-546.13	0/0:157:157,0:157:5615:0:0:0,-47.2617,-505.472	0/1:14:9,5:9:324:5:171:-11.5086,0,-25.2914	0/0:237:237,0:237:8493:0:0:0,-71.3441,-764.366	0/0:79:79,0:79:2802:0:0:0,-23.7814,-251.641	0/1:26:11,15:11:396:15:536:-40.748,0,-28.156	0/1:165:84,81:84:3016:81:2886:-210.287,0,-222	0/0:133:132,1:132:4724:1:36:0,-36.4387,-421.719	0/1:22:6,16:6:212:16:576:-45.5514,0,-12.8021	0/1:24:17,7:17:612:7:252:-15.8033,0,-48.1887	0/1:72:37,35:37:1328:35:1240:-90.2282,0,-98.1481	0/1:167:91,76:91:3261:76:2707:-193.594,0,-243.436	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/0:275:275,0:275:9888:0:0:0,-82.7832,-889.855	0/1:250:154,96:154:5498:96:3431:-233.735,0,-419.687	0/1:61:29,32:29:1032:32:1148:-85.1279,0,-74.8306	0/1:124:65,59:65:2336:59:2099:-151.546,0,-173.172	0/0:260:258,2:258:9237:2:72:0,-71.4335,-824.463	0/1:145:49,96:49:1760:96:3448:-266.864,0,-115.035	0/1:50:19,31:19:684:31:1116:-85.7002,0,-46.8388	0/1:55:22,33:22:788:33:1175:-89.5002,0,-54.6881	0/1:95:44,51:44:1569:51:1802:-133.858,0,-112.902	0/1:22:8,14:8:273:14:504:-39.0754,0,-18.2775	0/0:130:130,0:130:4671:0:0:0,-39.1339,-420.549	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/0:167:166,1:166:5928:1:36:0,-46.6737,-530.028	0/0:189:188,1:188:6768:1:36:0,-53.2964,-605.59	0/1:100:46,54:46:1639:54:1940:-144.748,0,-117.667	0/0:135:135,0:135:4821:0:0:0,-40.639,-434.044	0/1:21:8,13:8:284:13:455:-34.9304,0,-19.5817	0/0:140:138,2:138:4964:2:72:0,-35.3075,-440.069	0/1:122:72,50:72:2584:50:1791:-124.692,0,-196.083	0/0:249:248,1:248:8900:1:36:0,-71.3582,-797.382	0/1:93:52,41:52:1860:41:1443:-102.003,0,-139.684	0/1:84:38,46:38:1368:46:1630:-121.696,0,-98.132	0/0:87:87,0:87:3113:0:0:0,-26.1896,-280.395	0/1:143:70,73:70:2508:73:2585:-189.843,0,-182.925	0/1:37:18,19:18:629:19:684:-50.744,0,-45.7957	0/0:121:121,0:121:4332:0:0:0,-36.4246,-390.056	0/0:91:91,0:91:3248:0:0:0,-27.3937,-292.539	0/0:77:77,0:77:2752:0:0:0,-23.1793,-247.922	0/1:165:70,95:70:2520:95:3385:-255.136,0,-177.252	0/1:85:29,56:29:1036:56:2008:-155.403,0,-67.9664	0/0:90:90,0:90:3225:0:0:0,-27.0927,-290.47	0/0:122:121,1:121:4339:1:36:0,-33.1274,-387.086
chr05	5321316	.	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chr05	5321526	.	AAATG	GCATA,ACATG	179688	PASS	AB=0.532053,0.462425;ABP=40.1777,54.0876;AC=144,44;AF=0.765957,0.234043;AN=188;AO=7057,1932;CIGAR=2X2M1X,1M1X3M;DP=9033;DPB=9033.2;DPRA=0,1.02077;EPP=15327.1,4198.29;EPPR=0;GTI=1;LEN=5,1;MEANALT=1.92553,2.46939;MQM=37.705,59.5533;MQMR=0;NS=94;NUMALT=2;ODDS=0.157405;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=32,0;PQR=0;PRO=0;QA=250697,69165;QR=0;RO=0;RPL=0,0;RPP=15327.1,4198.29;RPPR=0;RPR=7057,1932;RUN=1,1;SAF=7057,1932;SAP=15327.1,4198.29;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:94:0,45,48:0:0:45,48:1609,1712:-261.567,-139.519,-125.972,-122.037,0,-107.588	1/1:53:0,53,0:0:0:53,0:1874,0:-158.021,-15.9546,0,-158.021,-15.9546,-158.021	1/2:142:0,73,69:0:0:73,69:2570,2465:-397.511,-201.244,-179.269,-196.612,0,-175.841	1/1:150:0,150,0:0:0:150,0:5302,0:-448.788,-45.1545,0,-448.788,-45.1545,-448.788	1/1:52:0,51,0:0:0:51,0:1819,0:-151.202,-15.3525,0,-151.202,-15.3525,-151.202	1/1:36:0,36,0:0:0:36,0:1278,0:-108.928,-10.8371,0,-108.928,-10.8371,-108.928	1/2:79:0,23,56:0:0:23,56:816,2012:-226.026,-164.494,-157.57,-61.8713,0,-45.0136	1/1:108:0,108,0:0:0:108,0:3834,0:-325.419,-32.5112,0,-325.419,-32.5112,-325.419	1/2:137:0,78,56:0:0:78,56:2750,1993:-371.112,-162.354,-138.873,-208.758,0,-191.901	1/1:67:0,65,0:0:0:65,0:2303,0:-194.518,-19.567,0,-194.518,-19.567,-194.518	1/1:41:0,41,0:0:0:41,0:1449,0:-121.425,-12.3422,0,-121.425,-12.3422,-121.425	1/2:90:0,50,40:0:0:50,40:1773,1440:-252.444,-117.825,-102.774,-134.967,0,-122.926	1/2:103:0,61,42:0:0:61,42:2180,1508:-289.047,-123.34,-104.977,-166.056,0,-153.413	1/1:58:0,57,0:0:0:57,0:2021,0:-170.739,-17.1587,0,-170.739,-17.1587,-170.739	1/1:83:0,83,0:0:0:83,0:2977,0:-252.28,-24.9855,0,-252.28,-24.9855,-252.28	1/1:66:0,66,0:0:0:66,0:2358,0:-199.565,-19.868,0,-199.565,-19.868,-199.565	1/1:24:0,24,0:0:0:24,0:854,0:-72.8856,-7.22472,0,-72.8856,-7.22472,-72.8856	1/1:28:0,28,0:0:0:28,0:1000,0:-85.2176,-8.42884,0,-85.2176,-8.42884,-85.2176	1/1:28:0,28,0:0:0:28,0:1001,0:-85.2406,-8.42884,0,-85.2406,-8.42884,-85.2406	1/2:202:0,90,110:0:0:90,110:3186,3936:-561.939,-320.845,-293.752,-241.08,0,-207.967	1/1:150:0,149,0:0:0:149,0:5235,0:-441.385,-44.8535,0,-441.385,-44.8535,-441.385	1/2:141:0,62,79:0:0:62,79:2202,2840:-397.456,-232.048,-213.384,-165.75,0,-141.969	1/2:104:0,52,52:0:0:52,52:1861,1860:-291.025,-151.927,-136.273,-139.442,0,-123.788	1/1:73:0,73,0:0:0:73,0:2601,0:-220.92,-21.9752,0,-220.92,-21.9752,-220.92	1/1:104:0,104,0:0:0:104,0:3693,0:-311.796,-31.3071,0,-311.796,-31.3071,-311.796	1/1:226:0,224,2:0:0:224,2:7956,72:-674.519,-67.4307,0,-668.644,-61.1961,-668.042	1/2:253:0,127,125:0:0:127,125:4520,4472:-709.871,-364.644,-326.414,-345.234,0,-307.605	1/1:30:0,30,0:0:0:30,0:1079,0:-91.4453,-9.0309,0,-91.4453,-9.0309,-91.4453	1/2:185:0,65,119:0:0:65,119:2311,4268:-523.207,-348.04,-328.473,-175.153,0,-139.33	1/2:129:0,54,75:0:0:54,75:1886,2688:-363.021,-219.503,-203.247,-143.859,0,-121.282	1/1:83:0,83,0:0:0:83,0:2955,0:-248.196,-24.9855,0,-248.196,-24.9855,-248.196	1/2:19:0,9,10:0:0:9,10:309,356:-52.9504,-29.3709,-26.6617,-23.919,0,-20.9087	1/1:52:0,52,0:0:0:52,0:1836,0:-154.708,-15.6536,0,-154.708,-15.6536,-154.708	1/1:39:0,36,1:0:0:36,1:1280,36:-108.647,-10.8371,0,-105.709,-7.89563,-105.408	1/1:88:0,87,0:0:0:87,0:3089,0:-260.352,-26.1896,0,-260.352,-26.1896,-260.352	1/2:31:0,23,8:0:0:23,8:823,288:-85.6571,-23.8592,-16.9355,-62.1506,0,-59.7423	1/1:209:0,208,0:0:0:208,0:7414,0:-622.755,-62.6142,0,-622.755,-62.6142,-622.755	1/1:176:0,176,0:0:0:176,0:6235,0:-528.532,-52.9813,0,-528.532,-52.9813,-528.532	1/1:41:0,41,0:0:0:41,0:1470,0:-124.075,-12.3422,0,-124.075,-12.3422,-124.075	1/2:15:0,12,3:0:0:12,3:424,108:-40.6842,-9.17208,-5.55972,-31.8651,0,-30.962	1/2:94:0,41,51:0:0:41,51:1457,1836:-260.069,-149.811,-137.469,-110.247,0,-94.8943	1/2:47:0,26,21:0:0:26,21:927,756:-132.043,-61.9871,-54.1603,-70.4038,0,-64.0822	1/2:266:0,167,99:0:0:167,99:5919,3506:-735.048,-285.578,-235.306,-449.815,0,-420.013	1/2:55:0,28,26:0:0:28,26:1006,928:-151.554,-75.6548,-67.226,-75.8896,0,-68.0628	1/1:62:0,62,0:0:0:62,0:2215,0:-186.368,-18.6639,0,-186.368,-18.6639,-186.368	1/2:127:0,70,57:0:0:70,57:2491,2052:-357.421,-167.788,-146.716,-189.982,0,-172.823	1/1:197:0,197,0:0:0:197,0:7032,0:-595.96,-59.3029,0,-595.96,-59.3029,-595.96	1/2:148:0,94,52:0:0:94,52:3327,1860:-404.665,-151.392,-123.095,-253.265,0,-237.612	1/1:86:0,86,0:0:0:86,0:3078,0:-260.968,-25.8886,0,-260.968,-25.8886,-260.968	1/1:99:0,99,0:0:0:99,0:3515,0:-298.073,-29.802,0,-298.073,-29.802,-298.073	1/1:126:0,126,0:0:0:126,0:4444,0:-377.149,-37.9298,0,-377.149,-37.9298,-377.149	1/2:23:0,17,6:0:0:17,6:606,216:-64.2733,-17.9843,-12.8668,-46.6426,0,-44.8364	1/1:190:0,190,0:0:0:190,0:6772,0:-574.118,-57.1957,0,-574.118,-57.1957,-574.118	1/1:58:0,56,0:0:0:56,0:1998,0:-169.39,-16.8577,0,-169.39,-16.8577,-169.39	1/2:10:0,7,3:0:0:7,3:251,108:-28.3338,-9.17208,-7.06487,-19.5149,0,-18.6118	1/2:193:0,127,64:0:0:127,64:4478,2286:-524.464,-186.402,-148.171,-338.169,0,-318.903	1/1:73:0,73,0:0:0:73,0:2611,0:-218.98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chr05	5396163	.	A	C	96622.9	PASS	AB=0.52381;ABP=14.1779;AC=142;AF=0.755319;AN=188;AO=4498;CIGAR=1X;DP=5597;DPB=5597;DPRA=0;EPP=9770.29;EPPR=2380.77;GTI=4;LEN=1;MEANALT=1.04255;MQM=59.904;MQMR=59.8813;NS=94;NUMALT=1;ODDS=0.89536;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=160810;QR=39265;RO=1095;RPL=4498;RPP=9770.29;RPPR=2380.77;RPR=0;RUN=1;SAF=0;SAP=9770.29;SAR=4498;SRF=0;SRP=2380.77;SRR=1095;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:18:10,8:10:356:8:284:-20.4848,0,-26.9627	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:58:19,39:19:680:39:1400:-108.839,0,-44.0648	1/1:175:1,174:1:36:174:6240:-558.082,-49.082,0	1/1:22:0,22:0:0:22:782:-70.6939,-6.62266,0	1/1:12:0,12:0:0:12:413:-37.4978,-3.61236,0	0/1:41:14,27:14:504:27:972:-75.4332,0,-33.3559	1/1:55:0,55:0:0:55:1961:-176.765,-16.5567,0	0/1:35:15,20:15:540:20:712:-53.8706,0,-38.4005	1/1:94:0,94:0:0:94:3349:-301.59,-28.2968,0	1/1:26:0,26:0:0:26:921:-83.2052,-7.82678,0	0/1:66:40,26:40:1440:26:932:-64.3309,0,-110.03	0/1:70:26,44:26:936:44:1572:-120.691,0,-63.4874	1/1:52:0,52:0:0:52:1855:-167.23,-15.6536,0	1/1:71:0,71:0:0:71:2543:-229.107,-21.3731,0	1/1:54:0,54:0:0:54:1912:-172.332,-16.2556,0	1/1:39:0,39:0:0:39:1396:-125.931,-11.7402,0	1/1:27:0,27:0:0:27:945:-85.3485,-8.12781,0	1/1:22:0,22:0:0:22:773:-69.8718,-6.62266,0	0/1:66:32,34:32:1140:34:1224:-90.5991,0,-83.0275	1/1:114:0,114:0:0:114:4059:-365.228,-34.3174,0	0/1:42:23,19:23:828:19:684:-49.2471,0,-62.1975	0/1:62:28,34:28:1008:34:1205:-90.09,0,-72.3725	1/1:20:0,20:0:0:20:705:-63.7728,-6.0206,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:139:0,139:0:0:139:4963:-446.794,-41.8432,0	0/1:86:55,31:55:1963:31:1112:-74.5028,0,-151.056	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	0/1:146:77,68:77:2760:68:2436:-175.486,0,-204.632	0/1:87:40,47:40:1436:47:1630:-120.79,0,-103.348	1/1:75:0,75:0:0:75:2668:-240.364,-22.5773,0	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4788	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	1/1:164:0,164:0:0:164:5869:-528.283,-49.3689,0	1/1:52:0,52:0:0:52:1872:-168.759,-15.6536,0	1/1:41:0,41:0:0:41:1476:-133.136,-12.3422,0	0/1:6:1,5:1:36:5:176:-14.3788,0,-1.79209	0/1:123:63,60:63:2264:60:2148:-156.561,0,-166.67	0/1:29:19,10:19:684:10:360:-24.0144,0,-53.1605	0/1:57:25,32:25:896:32:1148:-86.4711,0,-63.7792	0/1:48:17,31:17:612:31:1116:-86.3023,0,-40.7356	1/1:66:0,66:0:0:66:2361:-212.691,-19.868,0	0/1:79:30,49:30:1072:49:1752:-134.183,0,-73.0111	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:100:45,55:45:1608:55:1936:-144.409,0,-114.82	1/1:70:0,70:0:0:70:2504:-225.613,-21.0721,0	1/1:69:0,69:0:0:69:2470:-222.554,-20.7711,0	1/1:26:1,25:1:36:25:885:-76.3682,-4.22851,0	0/1:13:5,8:5:180:8:284:-21.9844,0,-12.6387	1/1:35:0,35:0:0:35:1241:-111.993,-10.5361,0	1/1:45:0,45:0:0:45:1614:-145.493,-13.5464,0	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/1:83:49,34:49:1745:34:1216:-84.752,0,-132.347	1/1:31:0,30:0:0:30:1080:-97.1534,-9.0309,0	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:11:5,6:5:180:6:212:-16.1135,0,-13.2407	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	0/1:56:21,35:21:756:35:1243:-95.3024,0,-51.5095	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	1/1:157:0,157:0:0:157:5616:-505.524,-47.2617,0	0/1:114:44,70:44:1576:70:2512:-192.014,0,-107.814	0/1:37:22,15:22:773:15:540:-37.7984,0,-58.7514	0/1:52:19,33:19:684:33:1176:-90.4942,0,-46.2368	1/1:128:0,128:0:0:128:4577:-412.077,-38.5318,0	0/1:71:44,27:44:1576:27:964:-65.7037,0,-120.758	0/1:22:9,13:9:324:13:459:-35.0214,0,-22.8832	0/1:27:14,13:14:504:13:464:-33.9697,0,-37.5703	0/1:47:19,28:19:684:28:980:-74.3614,0,-47.741	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	1/1:99:0,99:0:0:99:3548:-319.528,-29.802,0	1/1:91:0,91:0:0:91:3253:-292.97,-27.3937,0	1/1:114:0,114:0:0:114:4088:-368.096,-34.3174,0	1/1:148:0,148:0:0:148:5324:-479.263,-44.5524,0	0/1:39:21,18:21:756:18:648:-46.9117,0,-56.6271	1/1:90:0,90:0:0:90:3221:-290.109,-27.0927,0	0/0:15:14,1:14:500:1:36:0,-0.917175,-41.7379	1/1:97:0,97:0:0:97:3469:-312.42,-29.1999,0	0/1:77:40,36:40:1436:36:1284:-92.6254,0,-106.264	1/1:131:0,131:0:0:131:4704:-423.518,-39.4349,0	1/1:59:0,59:0:0:59:2120:-191.068,-17.7608,0	0/1:65:35,30:35:1256:30:1080:-77.9463,0,-93.7783	1/1:50:0,50:0:0:50:1796:-161.914,-15.0515,0	0/1:143:56,87:56:2012:87:3120:-237.965,0,-138.306	0/1:18:7,11:7:252:11:396:-30.5642,0,-17.6104	1/1:65:0,65:0:0:65:2336:-210.499,-19.567,0	1/1:66:0,66:0:0:66:2359:-212.568,-19.868,0	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0	0/1:49:21,28:21:752:28:985:-74.2103,0,-53.2558	0/1:62:34,27:34:1224:27:972:-69.0753,0,-91.7444	1/1:134:0,134:0:0:134:4784:-430.655,-40.338,0	1/1:90:2,88:2:72:88:3164:-278.135,-20.256,0
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chr05	10634497	.	A	G	25170.1	PASS	AB=0.373062;ABP=671.165;AC=48;AF=0.255319;AN=188;AO=1787;CIGAR=1X;DP=11520;DPB=11520;DPRA=0.785495;EPP=3883.43;EPPR=21118.4;GTI=7;LEN=1;MEANALT=1.01887;MQM=59.9396;MQMR=44.6457;NS=94;NUMALT=1;ODDS=5.71674;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63682;QR=343476;RO=9732;RPL=0;RPP=3883.43;RPPR=8.58044;RPR=1787;RUN=1;SAF=0;SAP=3883.43;SAR=1787;SRF=4943;SRP=8.30198;SRR=4789;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:71:48,23:48:1686:23:812:-52.0278,0,-110.333	0/0:109:109,0:109:3846:0:0:0,-32.8123,-299.405	0/1:190:114,76:114:4065:76:2723:-188.047,0,-278.444	0/0:221:221,0:221:7838:0:0:0,-66.5276,-629.711	0/0:157:157,0:157:5507:0:0:0,-47.2617,-422.773	0/0:84:84,0:84:2960:0:0:0,-25.2865,-223.725	0/1:101:68,33:68:2378:33:1171:-75.1853,0,-155.214	0/0:232:230,2:230:8092:2:72:0,-63.0022,-651.891	0/1:98:72,26:72:2536:26:936:-55.0585,0,-157.514	0/0:166:166,0:166:5867:0:0:0,-49.971,-478.156	0/0:130:130,0:130:4598:0:0:0,-39.1339,-400.183	0/1:114:70,44:70:2447:44:1568:-107.094,0,-166.472	0/1:84:57,27:57:2012:27:960:-61.4298,0,-128.554	0/1:138:86,52:86:3055:52:1864:-126.497,0,-217.873	0/0:105:105,0:105:3712:0:0:0,-31.6081,-297.925	0/0:116:116,0:116:4109:0:0:0,-34.9195,-337.371	0/0:123:123,0:123:4355:0:0:0,-37.0267,-332.774	0/0:92:92,0:92:3252:0:0:0,-27.6948,-239.035	0/0:79:79,0:79:2761:0:0:0,-23.7814,-231.482	0/1:146:101,45:101:3600:45:1599:-100.249,0,-240.588	0/0:140:140,0:140:4958:0:0:0,-42.1442,-393.943	0/1:59:42,17:42:1489:17:612:-37.6527,0,-101.521	0/1:76:43,33:43:1528:33:1184:-83.99,0,-100.376	0/1:62:51,11:51:1808:11:396:-17.3189,0,-116.553	0/0:138:138,0:138:4854:0:0:0,-41.5421,-376.938	0/0:376:376,0:376:13314:0:0:0,-113.187,-1098.11	0/1:226:144,82:144:5098:82:2933:-196.171,0,-333.333	0/1:33:28,5:28:1004:5:180:-6.61808,0,-66.2287	0/1:240:161,79:161:5669:79:2822:-181.972,0,-394.687	0/1:134:78,56:78:2755:56:1984:-138.494,0,-194.77	0/0:127:127,0:127:4487:0:0:0,-38.2308,-369.841	0/1:8:7,1:7:252:1:36:-1.19004,0,-17.468	0/0:19:19,0:19:672:0:0:0,-5.71957,-57.9726	0/1:13:9,4:9:320:4:144:-9.40023,0,-25.229	0/0:19:19,0:19:667:0:0:0,-5.71957,-59.4135	0/1:55:21,34:21:748:34:1224:-93.9086,0,-51.0886	0/0:324:324,0:324:11388:0:0:0,-97.5337,-928.838	0/0:110:110,0:110:3905:0:0:0,-33.1133,-309.504	0/0:80:80,0:80:2831:0:0:0,-24.0824,-229.408	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:209:160,49:160:5675:49:1734:-93.4262,0,-367.674	0/1:53:33,20:33:1149:20:708:-48.091,0,-77.4265	0/1:151:105,46:105:3714:46:1627:-101.262,0,-256.433	0/1:88:61,27:61:2137:27:949:-59.2321,0,-143.873	0/0:101:101,0:101:3548:0:0:0,-30.404,-287.679	0/0:144:144,0:144:5069:0:0:0,-43.3483,-418.004	0/0:200:200,0:200:7087:0:0:0,-60.206,-576.787	0/1:150:95,55:95:3370:55:1955:-131.07,0,-225.903	0/0:138:138,0:138:4904:0:0:0,-41.5421,-391.033	0/0:176:176,0:176:6230:0:0:0,-52.9813,-523.635	0/0:140:140,0:140:4982:0:0:0,-42.1442,-389.496	0/1:19:16,3:16:549:3:108:-4.3556,0,-42.122	0/0:180:180,0:180:6361:0:0:0,-54.1854,-521.722	0/0:80:80,0:80:2823:0:0:0,-24.0824,-243.331	0/1:13:8,5:8:288:5:180:-12.6377,0,-15.7138	0/1:162:111,51:111:3914:51:1820:-115.314,0,-256.605	0/0:46:46,0:46:1605:0:0:0,-13.8474,-129.914	0/1:26:13,13:13:464:13:464:-34.2707,0,-34.2707	0/1:34:19,15:19:680:15:540:-38.7015,0,-48.069	0/0:116:116,0:116:4097:0:0:0,-34.9195,-340.392	0/1:129:82,47:82:2880:47:1672:-111.934,0,-202.453	0/1:19:6,13:6:216:13:460:-36.0158,0,-14.0709	0/1:179:132,47:132:4666:47:1667:-96.4329,0,-327.306	0/1:153:88,65:88:3132:65:2311:-162.193,0,-211.553	0/1:69:29,40:29:1017:40:1408:-106.243,0,-63.9095	0/1:104:67,37:67:2363:37:1332:-88.8753,0,-163.385	0/0:163:163,0:163:5753:0:0:0,-49.0679,-465.828	0/1:164:56,108:56:1988:108:3843:-296.691,0,-122.555	0/1:80:37,43:37:1312:43:1536:-114.451,0,-92.2512	0/1:57:41,16:41:1436:16:576:-35.0154,0,-92.0014	0/1:110:75,34:75:2662:34:1195:-74.8283,0,-177.79	0/1:35:12,23:12:428:23:796:-61.4189,0,-26.5341	0/0:125:125,0:125:4374:0:0:0,-37.6287,-351.59	0/0:133:133,0:133:4696:0:0:0,-40.037,-376.262	0/0:215:215,0:215:7580:0:0:0,-64.7214,-627.662	0/0:249:248,1:248:8792:1:36:0,-71.3582,-705.973	0/1:255:145,110:145:5071:110:3926:-276.767,0,-342.242	0/0:159:159,0:159:5632:0:0:0,-47.8638,-446.21	0/1:26:13,13:13:456:13:468:-34.6329,0,-33.5465	0/0:269:269,0:269:9497:0:0:0,-80.9771,-710.789	0/1:129:84,45:84:2920:45:1581:-103.741,0,-192.624	0/0:266:265,1:265:9338:1:36:0,-76.4757,-745.939	0/0:136:136,0:136:4786:0:0:0,-40.9401,-374.096	0/1:92:54,38:54:1892:38:1364:-95.366,0,-131.97	0/0:108:108,0:108:3824:0:0:0,-32.5112,-293.302	0/1:120:82,38:82:2875:38:1368:-87.2972,0,-194.746	0/1:42:26,16:26:928:16:576:-39.5271,0,-56.7816	0/0:101:100,1:100:3530:1:36:0,-26.8058,-262.159	0/0:104:104,0:104:3663:0:0:0,-31.3071,-286.43	0/0:94:94,0:94:3285:0:0:0,-28.2968,-286.897	0/1:195:102,93:102:3554:93:3330:-240.829,0,-248.662	0/1:56:36,20:36:1275:20:716:-47.91,0,-87.4052	0/0:174:174,0:174:6093:0:0:0,-52.3792,-493.752	0/0:182:181,1:181:6349:1:36:0,-51.1892,-503.463
chr05	12702518	.	G	A	25503.4	PASS	AB=0.530092;ABP=29.5399;AC=47;AF=0.25;AN=188;AO=1795;CIGAR=1X;DP=7089;DPB=7089;DPRA=1.10319;EPP=3900.8;EPPR=11420.7;GTI=0;LEN=1;MEANALT=1;MQM=35.6836;MQMR=47.3544;NS=94;NUMALT=1;ODDS=0.746367;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=64326;QR=188768;RO=5294;RPL=1795;RPP=3900.8;RPPR=11420.7;RPR=0;RUN=1;SAF=0;SAP=3900.8;SAR=1795;SRF=0;SRP=11498.8;SRR=5294;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:83:45,38:45:1608:38:1355:-80.1184,0,-117.336	0/0:23:23,0:23:820:0:0:0,-6.92369,-72.4827	0/1:76:32,44:32:1140:44:1584:-100.282,0,-77.8185	0/0:225:224,1:224:8006:1:36:0,-64.3856,-711.143	0/0:59:59,0:59:2092:0:0:0,-17.7608,-185.749	0/0:52:52,0:52:1846:0:0:0,-15.6536,-163.648	0/1:126:64,62:64:2296:62:2219:-147.97,0,-167.398	0/0:99:98,1:98:3497:1:32:0,-26.8557,-305.647	0/1:126:64,62:64:2296:62:2228:-134.997,0,-165.954	0/0:53:53,0:53:1900:0:0:0,-15.9546,-169.746	0/0:44:44,0:44:1576:0:0:0,-13.2453,-139.253	0/1:106:57,49:57:2040:49:1734:-101.416,0,-148.939	0/1:76:54,22:54:1910:22:788:-39.1216,0,-144.814	0/1:41:19,22:19:684:22:791:-50.6717,0,-48.7167	0/0:73:73,0:73:2620:0:0:0,-21.9752,-233.025	0/0:56:56,0:56:1995:0:0:0,-16.8577,-177.419	0/0:17:17,0:17:595:0:0:0,-5.11751,-52.8433	0/0:30:30,0:30:1063:0:0:0,-9.0309,-93.8164	0/0:19:19,0:19:675:0:0:0,-5.71957,-59.8376	0/1:142:68,74:68:2431:74:2664:-177.52,0,-173.521	0/0:153:153,0:153:5419:0:0:0,-46.0576,-482.099	0/1:126:40,86:40:1424:86:3084:-223.648,0,-88.6683	0/1:107:47,60:47:1684:60:2160:-147.836,0,-118.831	0/1:63:32,31:32:1143:31:1112:-70.1502,0,-82.2895	0/0:96:96,0:96:3420:0:0:0,-28.8989,-304.473	0/0:175:173,2:173:6159:2:72:0,-46.1754,-543.69	0/1:149:81,68:81:2896:68:2440:-152.162,0,-212.499	0/1:25:13,12:13:464:12:432:-27.8574,0,-34.2174	0/1:219:129,90:129:4620:90:3221:-209.485,0,-347.402	0/1:82:33,49:33:1184:49:1764:-117.221,0,-80.8379	0/0:100:100,0:100:3579:0:0:0,-30.103,-318.739	0/1:8:3,5:3:108:5:180:-12.5241,0,-7.57883	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.458	0/1:10:8,2:8:288:2:72:-2.92461,0,-22.8939	0/0:14:14,0:14:495:0:0:0,-4.21442,-44.1533	0/1:6:4,2:4:144:2:68:-3.96018,0,-11.3233	0/0:223:223,0:223:7941:0:0:0,-67.1297,-710.704	0/0:102:102,0:102:3611:0:0:0,-30.7051,-320.949	0/0:42:42,0:42:1512:0:0:0,-12.6433,-134.094	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.4073	0/1:120:60,60:60:2105:60:2141:-136.671,0,-150.66	0/1:23:11,12:11:396:12:432:-28.4594,0,-28.7444	0/1:134:39,95:39:1395:95:3416:-235.03,0,-83.5098	0/1:38:15,23:15:540:23:824:-57.7398,0,-37.0212	0/0:54:54,0:54:1907:0:0:0,-16.2556,-170.043	0/0:151:150,1:150:5321:1:36:0,-42.0319,-471.328	0/0:84:84,0:84:2976:0:0:0,-25.2865,-261.514	0/1:106:43,63:43:1519:63:2240:-155.587,0,-103.762	0/0:53:53,0:53:1896:0:0:0,-15.9546,-167.864	0/0:67:67,0:67:2412:0:0:0,-20.169,-214.918	0/0:313:313,0:313:11142:0:0:0,-94.2224,-997.707	0/1:13:2,11:2:72:11:392:-29.2549,0,-2.88627	0/0:37:37,0:37:1320:0:0:0,-11.1381,-116.344	0/0:40:40,0:40:1432:0:0:0,-12.0412,-128.317	0/1:7:1,6:1:36:6:216:-15.0728,0,-1.44131	0/1:99:44,55:44:1556:55:1972:-130.806,0,-108.315	0/0:42:42,0:42:1489:0:0:0,-12.6433,-132.371	0/1:4:3,1:3:108:1:32:-1.91692,0,-8.83803	0/1:17:5,12:5:180:12:432:-31.4958,0,-11.3803	0/0:83:83,0:83:2959:0:0:0,-24.9855,-262.943	0/1:84:43,41:43:1527:41:1470:-97.4088,0,-111.401	0/1:7:2,5:2:72:5:180:-13.2851,0,-4.69245	0/1:173:63,110:63:2256:110:3948:-284.529,0,-150.266	0/1:108:51,57:51:1832:57:2040:-138.673,0,-130.714	0/1:59:36,23:36:1292:23:828:-49.7593,0,-97.5278	0/1:70:31,39:31:1108:39:1400:-95.1766,0,-78.4121	0/0:86:86,0:86:3080:0:0:0,-25.8886,-275.393	0/1:87:23,64:23:828:64:2295:-164.744,0,-47.828	0/1:12:9,3:9:324:3:108:-5.47689,0,-25.6188	0/1:40:24,16:24:860:16:576:-32.4423,0,-64.6024	0/1:41:18,23:18:648:23:828:-58.1678,0,-46.1174	0/1:18:11,7:11:388:7:248:-15.6105,0,-29.6604	0/0:63:63,0:63:2255:0:0:0,-18.9649,-198.531	0/0:57:57,0:57:2024:0:0:0,-17.1587,-178.702	0/0:55:55,0:55:1947:0:0:0,-16.5566,-172.303	0/0:91:91,0:91:3248:0:0:0,-27.3937,-289.864	0/1:103:49,54:49:1744:54:1944:-120.138,0,-123.196	0/0:64:63,1:63:2221:1:36:0,-16.1423,-192.677	0/1:8:2,6:2:72:6:216:-14.7718,0,-4.33394	0/0:80:79,1:79:2817:1:36:0,-20.8362,-246.586	0/1:89:31,58:31:1093:58:2069:-132.966,0,-70.1166	0/0:157:157,0:157:5598:0:0:0,-47.2617,-498.934	0/0:72:72,0:72:2576:0:0:0,-21.6742,-230.343	0/1:39:21,18:21:756:18:644:-41.8486,0,-55.7969	0/0:48:48,0:48:1704:0:0:0,-14.4494,-152.454	0/1:165:85,80:85:3048:80:2851:-189.231,0,-220.827	0/1:27:16,11:16:576:11:396:-23.1086,0,-43.2405	0/0:63:63,0:63:2248:0:0:0,-18.9649,-197.436	0/0:57:57,0:57:2035:0:0:0,-17.1587,-180.699	0/0:18:18,0:18:644:0:0:0,-5.41854,-57.6205	0/1:45:30,15:30:1063:15:540:-29.9781,0,-81.5561	0/1:66:24,42:24:864:42:1504:-106.472,0,-57.332	0/0:95:95,0:95:3374:0:0:0,-28.5978,-300.105	0/0:116:116,0:116:4164:0:0:0,-34.9195,-371.017
chr05	13118712	.	G	A	36606.1	PASS	AB=0.493607;ABP=4.56503;AC=47;AF=0.25;AN=188;AO=2168;CIGAR=1X;DP=9268;DPB=9268;DPRA=0.935646;EPP=4641.53;EPPR=15210.5;GTI=2;LEN=1;MEANALT=1.01961;MQM=59.9862;MQMR=59.9938;NS=94;NUMALT=1;ODDS=1.4473;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77363;QR=253921;RO=7095;RPL=8;RPP=4641.53;RPPR=15210.5;RPR=2160;RUN=1;SAF=2168;SAP=4710.76;SAR=0;SRF=7095;SRP=15409.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:17,20:17:604:20:720:-53.9907,0,-43.5525	0/0:81:80,1:80:2864:1:21:0,-22.2835,-255.897	0/1:169:60,108:60:2156:108:3819:-292.972,0,-143.374	0/0:239:238,0:238:8519:0:0:0,-71.6451,-766.349	0/0:44:44,0:44:1571:0:0:0,-13.2453,-141.679	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/1:60:34,26:34:1216:26:917:-64.7828,0,-91.6848	0/0:146:146,0:146:5214:0:0:0,-43.9504,-469.396	0/1:88:56,32:56:1985:32:1148:-77.1392,0,-152.432	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.972	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/1:80:39,41:39:1396:41:1468:-108.334,0,-101.857	0/1:91:42,49:42:1512:49:1756:-130.93,0,-108.981	0/1:100:52,48:52:1872:48:1724:-125.342,0,-138.656	0/0:101:101,0:101:3620:0:0:0,-30.404,-326.005	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/0:33:33,0:33:1175:0:0:0,-9.93399,-106.057	0/1:150:61,89:61:2188:89:3177:-240.998,0,-152.031	0/0:136:136,0:136:4884:0:0:0,-40.9401,-439.711	0/1:129:33,96:33:1184:96:3441:-271.068,0,-68.0351	0/1:148:97,51:97:3472:51:1817:-119.257,0,-268.139	0/1:39:23,16:23:828:16:576:-40.4348,0,-63.1039	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/0:291:291,0:291:10444:0:0:0,-87.5997,-939.874	0/1:169:100,69:100:3587:69:2472:-171.86,0,-272.161	0/1:39:21,18:21:748:18:648:-46.9117,0,-55.9051	0/1:287:155,132:155:5564:132:4736:-340.002,0,-414.486	0/1:157:80,77:80:2868:77:2740:-199.579,0,-211.086	0/0:157:157,0:157:5580:0:0:0,-47.2617,-502.325	0/1:15:13,2:13:459:2:72:-2.32127,0,-37.1286	0/0:23:23,0:23:800:0:0:0,-6.92369,-72.3158	0/1:4:3,1:3:104:1:36:-2.39415,0,-8.49869	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/0:207:207,0:207:7439:0:0:0,-62.3132,-669.55	0/0:189:189,0:189:6755:0:0:0,-56.8947,-608.024	0/0:40:40,0:40:1427:0:0:0,-12.0412,-128.727	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/1:118:43,75:43:1548:75:2671:-205.112,0,-104.092	0/1:42:24,18:24:856:18:644:-45.6473,0,-64.7178	0/1:171:85,86:85:3039:86:3049:-223.164,0,-222.263	0/1:61:36,25:36:1283:25:892:-62.2369,0,-97.4098	0/0:55:55,0:55:1967:0:0:0,-16.5566,-177.304	0/0:96:96,0:96:3388:0:0:0,-28.8989,-305.134	0/0:87:87,0:87:3112:0:0:0,-26.1896,-280.307	0/1:196:94,102:94:3363:102:3645:-269.251,0,-243.884	0/0:136:136,0:136:4852:0:0:0,-40.9401,-436.833	0/0:187:187,0:187:6688:0:0:0,-56.2926,-601.995	0/0:72:71,0:71:2515:0:0:0,-21.3731,-226.243	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/0:135:135,0:135:4815:0:0:0,-40.639,-433.507	0/0:105:104,0:104:3719:0:0:0,-31.3071,-334.55	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:128:74,54:74:2647:54:1913:-133.912,0,-199.944	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:14:8,6:8:284:6:216:-15.5761,0,-21.6889	0/1:22:14,8:14:504:8:288:-19.6447,0,-39.0754	0/0:73:73,0:73:2611:0:0:0,-21.9752,-235.237	0/1:118:64,54:64:2300:54:1940:-139.355,0,-171.739	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/1:149:87,62:87:3116:62:2219:-155.121,0,-235.813	0/1:244:163,81:163:5835:81:2893:-187.15,0,-451.81	0/1:78:42,36:42:1504:36:1286:-92.5622,0,-112.174	0/1:109:50,59:50:1796:59:2086:-155.196,0,-129.11	0/0:206:203,3:203:7262:3:108:0,-51.937,-643.556	0/1:184:63,121:63:2268:121:4321:-333.676,0,-148.992	0/1:31:18,13:18:635:13:456:-32.04,0,-48.145	0/1:65:26,39:26:932:39:1367:-103.759,0,-64.6319	0/1:45:20,25:20:720:25:896:-67.414,0,-51.5824	0/1:24:17,7:17:608:7:252:-15.8042,0,-47.8273	0/0:150:150,0:150:5376:0:0:0,-45.1545,-483.971	0/0:76:75,1:75:2696:1:32:0,-19.679,-239.684	0/0:201:201,0:201:7199:0:0:0,-60.507,-647.941	0/0:132:131,1:131:4704:1:36:0,-36.1377,-419.908	0/1:145:63,82:63:2234:82:2928:-220.106,0,-157.674	0/0:124:124,0:124:4435:0:0:0,-37.3277,-399.321	0/1:24:11,13:11:396:13:468:-35.2349,0,-28.758	0/0:110:109,0:109:3899:0:0:0,-32.8123,-350.744	0/1:93:42,51:42:1512:51:1817:-135.814,0,-108.379	0/0:225:225,0:225:8073:0:0:0,-67.7317,-726.584	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/1:98:62,36:62:2212:36:1288:-86.7226,0,-169.844	0/0:57:57,0:57:2040:0:0:0,-17.1587,-183.872	0/1:165:86,79:86:3080:79:2824:-204.729,0,-227.758	0/1:38:25,13:25:896:13:464:-30.6584,0,-69.5212	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/0:67:67,0:67:2400:0:0:0,-20.169,-216.257	0/1:139:66,73:66:2368:73:2608:-193.125,0,-171.535	0/1:81:31,50:31:1091:50:1784:-136.459,0,-74.1153	0/0:149:149,0:149:5329:0:0:0,-44.8535,-479.742	0/0:106:106,0:106:3783:0:0:0,-31.9092,-340.669
chr05	13349878	.	GCACAT	TTACAC,TTACCC	207645	PASS	AB=0.466939,0.524474;ABP=47.2341,27.2443;AC=139,49;AF=0.739362,0.260638;AN=188;AO=7198,2461;CIGAR=2X3M1X,2X2M2X;DP=9730;DPB=9730.17;DPRA=26.1452,0.950871;EPP=15031.2,5022.04;EPPR=0;GTI=1;LEN=6,6;MEANALT=2.32258,2.76786;MQM=59.9128,47.0963;MQMR=0;NS=94;NUMALT=2;ODDS=5.11678;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=253150,86249;QR=0;RO=0;RPL=72,38;RPP=15014.1,5022.04;RPPR=0;RPR=7126,2423;RUN=1,1;SAF=2,0;SAP=15615.9,5347;SAR=7196,2461;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:61:0,26,34:0:0:26,34:921,1189:-170.374,-95.3428,-87.516,-75.1009,0,-64.8659	1/1:79:0,79,0:0:0:79,0:2783,0:-250.714,-23.7814,0,-250.714,-23.7814,-250.714	1/2:211:0,93,117:0:0:93,117:3286,4105:-595.757,-328.23,-300.235,-267.64,0,-232.42	1/1:208:0,206,1:0:0:206,1:7260,36:-653.102,-62.0122,0,-650.182,-59.0933,-649.881	1/1:31:0,30,1:0:0:30,1:1066,35:-95.9047,-9.0309,0,-93.0798,-5.85849,-92.7788	1/1:85:0,85,0:0:0:85,0:2966,0:-267.067,-25.5876,0,-267.067,-25.5876,-267.067	1/2:92:0,43,48:0:0:43,48:1517,1664:-257.755,-134.224,-121.28,-123.618,0,-109.169	1/1:150:0,146,0:0:0:146,0:5102,0:-459.001,-43.9504,0,-459.001,-43.9504,-459.001	1/2:300:0,140,158:0:0:140,158:4916,5528:-841.364,-441.257,-399.113,-400.123,0,-352.56	1/1:80:0,80,0:0:0:80,0:2833,0:-255.209,-24.0824,0,-255.209,-24.0824,-255.209	1/1:66:0,66,0:0:0:66,0:2317,0:-208.79,-19.868,0,-208.79,-19.868,-208.79	1/2:73:0,32,38:0:0:32,38:1132,1321:-197.037,-104.829,-95.1962,-92.2215,0,-80.7823	1/2:60:0,25,35:0:0:25,35:886,1217:-169.391,-97.2071,-89.6813,-72.5329,0,-61.9969	1/2:114:0,65,48:0:0:65,48:2297,1699:-323.732,-136.657,-117.09,-187.126,0,-172.677	1/1:68:0,68,0:0:0:68,0:2414,0:-217.517,-20.47,0,-217.517,-20.47,-217.517	1/1:79:0,77,1:0:0:77,1:2700,36:-242.912,-23.1793,0,-240.002,-20.2463,-239.701	1/1:70:0,70,0:0:0:70,0:2468,0:-222.375,-21.0721,0,-222.375,-21.0721,-222.375	1/1:39:0,39,0:0:0:39,0:1373,0:-123.869,-11.7402,0,-123.869,-11.7402,-123.869	1/1:29:0,29,0:0:0:29,0:998,0:-90.1168,-8.72987,0,-90.1168,-8.72987,-90.1168	1/2:160:0,71,86:0:0:71,86:2511,3039:-450.369,-245.861,-224.488,-204.549,0,-178.661	1/1:191:0,191,0:0:0:191,0:6680,0:-601.292,-57.4967,0,-601.292,-57.4967,-601.292	1/2:154:0,50,104:0:0:50,104:1734,3640:-435.406,-294.461,-279.409,-141.292,0,-109.985	1/2:189:0,89,98:0:0:89,98:3121,3429:-530.534,-276.554,-249.762,-254.032,0,-224.531	1/2:76:0,42,32:0:0:42,32:1475,1117:-209.604,-89.5474,-76.9041,-120.123,0,-110.49	1/1:67:0,67,0:0:0:67,0:2366,0:-213.197,-20.169,0,-213.197,-20.169,-213.197	1/1:350:0,345,2:0:0:345,2:12163,72:-1094.18,-103.855,0,-1088.33,-98.0009,-1087.73	1/2:224:0,109,113:0:0:109,113:3830,4001:-633.824,-322.085,-289.273,-311.746,0,-277.729	1/2:22:0,9,13:0:0:9,13:314,449:-62.0793,-36.5378,-33.8286,-25.8878,0,-21.9744	1/2:281:0,139,140:0:0:139,140:4916,4948:-798.5,-398.1,-356.256,-400.408,0,-358.263	1/2:152:0,68,80:0:0:68,80:2388,2771:-416.748,-222.388,-201.918,-194.386,0,-170.303	1/1:145:0,145,0:0:0:145,0:5074,0:-456.815,-43.6494,0,-456.815,-43.6494,-456.815	1/2:12:0,6,6:0:0:6,6:216,209:-34.8299,-17.1983,-15.3921,-17.9843,0,-16.1782	1/1:22:0,21,0:0:0:21,0:742,0:-66.8489,-6.32163,0,-66.8489,-6.32163,-66.8489	1/2:9:0,2,7:0:0:2,7:72,251:-26.2507,-20.374,-19.7719,-6.23466,0,-4.12745	1/1:9:0,9,0:0:0:9,0:307,0:-27.9605,-2.70927,0,-27.9605,-2.70927,-27.9605	1/2:11:0,4,7:0:0:4,7:144,251:-32.273,-20.5211,-19.317,-12.1095,0,-10.0023	1/1:187:0,184,0:0:0:184,0:6450,0:-580.29,-55.3895,0,-580.29,-55.3895,-580.29	1/1:156:0,156,0:0:0:156,0:5439,0:-489.647,-46.9607,0,-489.647,-46.9607,-489.647	1/1:54:0,54,0:0:0:54,0:1876,0:-169.117,-16.2556,0,-169.117,-16.2556,-169.117	2/2:4:0,0,4:0:0:0,4:0,142:-13.0233,-13.0233,-13.0233,-1.20412,-1.20412,0	1/2:144:0,74,69:0:0:74,69:2613,2433:-408.109,-195.318,-173.041,-212.861,0,-192.09	1/2:28:0,16,12:0:0:16,12:574,425:-81.3099,-34.4854,-29.6689,-47.1779,0,-43.5655	1/2:137:0,61,76:0:0:61,76:2144,2685:-390.366,-215.85,-197.487,-174.866,0,-151.987	1/2:49:0,30,19:0:0:30,19:1062,671:-141.2,-54.6941,-45.6632,-86.8586,0,-81.139	1/1:45:0,45,0:0:0:45,0:1569,0:-141.387,-13.5464,0,-141.387,-13.5464,-141.387	1/1:96:0,96,0:0:0:96,0:3401,0:-306.307,-28.8989,0,-306.307,-28.8989,-306.307	1/1:139:0,138,0:0:0:138,0:4847,0:-436.129,-41.5421,0,-436.129,-41.5421,-436.129	1/2:174:0,78,95:0:0:78,95:2737,3356:-494.114,-271.371,-247.891,-222.737,0,-194.139	1/1:94:0,92,0:0:0:92,0:3263,0:-293.576,-27.6948,0,-293.576,-27.6948,-293.576	1/1:121:0,119,0:0:0:119,0:4182,0:-376.317,-35.8226,0,-376.317,-35.8226,-376.317	1/1:105:0,104,0:0:0:104,0:3636,0:-326.236,-31.3071,0,-326.236,-31.3071,-326.236	1/2:11:0,7,4:0:0:7,4:249,144:-32.3287,-12.0373,-9.93011,-20.6484,0,-19.4443	1/1:148:0,148,0:0:0:148,0:5241,0:-471.835,-44.5524,0,-471.835,-44.5524,-471.835	1/1:85:0,83,0:0:0:83,0:2954,0:-265.645,-24.9855,0,-265.645,-24.9855,-265.645	1/2:21:0,17,4:0:0:17,4:588,144:-59.6998,-11.9254,-6.80788,-48.1275,0,-46.9234	1/2:139:0,58,81:0:0:58,81:2047,2823:-394.393,-227.701,-210.242,-167.042,0,-142.658	1/1:65:0,64,1:0:0:64,1:2273,36:-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chr05	13349890	.	G	A	41929.6	PASS	AB=0.530826;ABP=40.7637;AC=49;AF=0.260638;AN=188;AO=2446;CIGAR=1X;DP=9558;DPB=9558;DPRA=0.953483;EPP=5184.94;EPPR=14769.9;GTI=1;LEN=1;MEANALT=1.05357;MQM=47.1697;MQMR=59.9094;NS=94;NUMALT=1;ODDS=5.33991;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87664;QR=254006;RO=7109;RPL=2431;RPP=5184.94;RPPR=14786.9;RPR=15;RUN=1;SAF=0;SAP=5314.43;SAR=2446;SRF=2;SRP=15422.6;SRR=7107;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:60:26,34:26:913:34:1224:-90.1492,0,-64.4222	0/0:80:80,0:80:2856:0:0:0,-24.0824,-257.277	0/1:210:92,118:92:3288:118:4231:-311.003,0,-232.811	0/0:204:203,1:203:7260:1:36:0,-57.8313,-649.853	0/0:31:30,1:30:1076:1:36:0,-5.76512,-93.586	0/0:82:82,0:82:2894:0:0:0,-24.6845,-260.679	0/1:90:43,47:43:1540:47:1673:-122.497,0,-111.8	0/0:144:144,0:144:5138:0:0:0,-43.3483,-462.518	0/1:294:137,157:137:4895:157:5616:-406.898,0,-352.2	0/0:81:81,0:81:2901:0:0:0,-24.3834,-261.316	0/0:61:61,0:61:2164:0:0:0,-18.3628,-195.025	0/1:72:32,40:32:1144:40:1430:-104.435,0,-81.5954	0/1:59:25,34:25:891:34:1209:-89.4231,0,-62.748	0/1:112:63,49:63:2256:49:1749:-121.981,0,-169.588	0/0:66:66,0:66:2376:0:0:0,-19.868,-214.097	0/0:79:78,1:78:2770:1:36:0,-20.2146,-245.944	0/0:71:71,0:71:2527:0:0:0,-21.3731,-227.682	0/0:36:36,0:36:1280:0:0:0,-10.8371,-115.503	0/0:29:29,0:29:1029:0:0:0,-8.72987,-92.8762	0/1:155:69,86:69:2472:86:3088:-229.632,0,-176.063	0/0:186:186,0:186:6633:0:0:0,-55.9916,-597.045	0/1:152:50,102:50:1788:102:3664:-282.975,0,-115.446	0/1:184:89,95:89:3180:95:3402:-248.403,0,-231.034	0/1:76:42,33:42:1508:33:1169:-81.2292,0,-113.253	0/0:67:67,0:67:2396:0:0:0,-20.169,-215.895	0/0:349:347,2:347:12400:2:72:0,-98.2451,-1109.02	0/1:220:107,113:107:3848:113:4067:-295.878,0,-280.288	0/1:22:9,13:9:320:13:464:-35.1205,0,-22.5197	0/1:278:136,141:136:4867:141:5039:-364.707,0,-354.537	0/1:145:66,79:66:2352:79:2836:-208.43,0,-168.288	0/0:143:143,0:143:5065:0:0:0,-43.0473,-455.994	0/1:12:6,6:6:216:6:212:-15.6565,0,-16.1782	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1226	0/1:9:2,7:2:72:7:252:-19.8541,0,-4.12745	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:12:4,8:4:144:8:288:-22.3372,0,-9.70126	0/0:185:185,0:185:6631:0:0:0,-55.6905,-596.852	0/0:153:153,0:153:5468:0:0:0,-46.0576,-492.248	0/0:55:55,0:55:1960:0:0:0,-16.5566,-176.675	1/1:4:0,4:0:0:4:144:-13.1972,-1.20412,0	0/1:141:73,68:73:2624:68:2434:-174.003,0,-193.962	0/1:27:16,11:16:576:11:396:-27.5237,0,-44.0472	0/1:137:61,76:61:2157:76:2732:-201.397,0,-153.155	0/1:49:30,19:30:1063:19:684:-46.7935,0,-81.2296	0/0:44:44,0:44:1576:0:0:0,-13.2453,-141.985	0/0:95:95,0:95:3404:0:0:0,-28.5978,-306.574	0/0:134:134,0:134:4795:0:0:0,-40.338,-431.636	0/1:170:76,94:76:2724:94:3365:-249.829,0,-194.228	0/0:94:94,0:94:3364:0:0:0,-28.2968,-302.976	0/0:120:120,0:120:4312:0:0:0,-36.1236,-386.886	0/0:101:101,0:101:3624:0:0:0,-30.404,-326.365	0/1:10:6,4:6:216:4:144:-10.2311,0,-16.7802	0/0:145:145,0:145:5177:0:0:0,-43.6493,-466.07	0/0:86:86,0:86:3079:0:0:0,-25.8886,-276.848	0/1:21:17,4:17:608:4:144:-6.80788,0,-48.7304	0/1:140:58,82:58:2068:82:2925:-218.843,0,-144.247	0/0:64:63,1:63:2236:1:36:0,-15.6872,-197.923	0/1:12:4,8:4:144:8:288:-22.569,0,-9.70126	0/1:15:11,4:11:392:4:144:-8.75454,0,-31.1046	0/0:77:77,0:77:2740:0:0:0,-23.1793,-246.844	0/1:102:55,47:55:1967:47:1692:-119.713,0,-146.599	0/1:15:5,10:5:180:10:356:-27.6988,0,-12.0366	0/1:216:91,125:91:3264:125:4498:-336.912,0,-228.8	0/1:186:99,87:99:3544:87:3124:-221.909,0,-263.177	0/1:77:47,30:47:1665:30:1080:-72.6006,0,-126.956	0/1:111:55,56:55:1961:56:1997:-145.59,0,-143.242	0/0:225:225,0:225:8067:0:0:0,-67.7317,-726.043	0/1:134:46,88:46:1644:88:3156:-241.847,0,-107.133	0/1:53:30,23:30:1076:23:828:-58.1335,0,-80.9946	0/1:45:14,31:14:500:31:1116:-85.8121,0,-31.7898	0/1:40:18,22:18:640:22:792:-58.7312,0,-45.8881	0/1:28:18,10:18:644:10:356:-23.7579,0,-49.8618	0/0:121:121,0:121:4325:0:0:0,-36.4246,-389.424	0/0:86:83,2:83:2959:2:72:0,-19.2035,-259.61	0/0:345:345,0:345:12307:0:0:0,-103.855,-1107.17	0/0:150:150,0:150:5372:0:0:0,-45.1545,-483.603	0/1:108:53,55:53:1908:55:1972:-140.774,0,-139.486	0/0:94:94,0:94:3353:0:0:0,-28.2968,-301.986	0/1:28:11,17:11:388:17:612:-45.6701,0,-26.8285	0/0:87:82,5:82:2925:5:176:0,-10.1322,-247.426	0/1:115:60,55:60:2137:55:1976:-140.111,0,-157.978	0/0:198:198,0:198:7081:0:0:0,-59.6039,-637.348	0/0:52:52,0:52:1852:0:0:0,-15.6536,-166.182	0/1:69:31,38:31:1108:38:1368:-101.358,0,-79.2599	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.139	0/1:139:73,66:73:2599:66:2372:-169.278,0,-192.314	0/1:35:15,20:15:540:20:720:-53.3532,0,-38.4005	0/0:71:71,0:71:2528:0:0:0,-21.3731,-227.769	0/0:98:98,0:98:3486:0:0:0,-29.5009,-313.952	0/0:59:59,0:59:2102:0:0:0,-17.7608,-189.448	0/1:113:52,61:52:1868:61:2175:-159.416,0,-134.36	0/1:76:21,55:21:752:55:1961:-151.993,0,-45.128	0/0:132:132,0:132:4724:0:0:0,-39.736,-425.305	0/0:106:105,1:105:3771:1:36:0,-28.3304,-336.009
chr05	13629666	.	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chr05	14309556	.	A	C	155992	PASS	AB=0.452713;ABP=103.228;AC=140;AF=0.744681;AN=188;AO=7441;CIGAR=1X;DP=10282;DPB=10282;DPRA=0;EPP=16160.9;EPPR=6159.13;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9801;MQMR=60;NS=94;NUMALT=1;ODDS=5.2284;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=266232;QR=98052;RO=2835;RPL=0;RPP=16160.9;RPPR=6159.13;RPR=7441;RUN=1;SAF=7441;SAP=16160.9;SAR=0;SRF=2835;SRP=6159.13;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:48:32,16:32:1117:16:572:-37.364,0,-86.386	1/1:174:0,174:0:0:174:6223:-560.166,-52.3792,0	0/1:152:64,88:64:2246:88:3152:-238.149,0,-156.644	1/1:264:2,262:2:72:262:9385:-837.775,-72.6352,0	1/1:118:1,117:1:36:117:4172:-372.066,-31.9233,0	1/1:100:0,100:0:0:100:3580:-322.407,-30.103,0	0/1:173:80,93:80:2803:93:3340:-248.738,0,-200.43	1/1:128:0,128:0:0:128:4580:-412.365,-38.5318,0	0/1:73:32,41:32:1106:41:1476:-111.161,0,-77.8673	1/1:110:0,110:0:0:110:3940:-354.79,-33.1133,0	1/1:76:0,76:0:0:76:2720:-245.043,-22.8783,0	0/1:78:39,39:39:1366:39:1404:-103.179,0,-99.7541	0/1:62:32,30:32:1114:30:1072:-78.1286,0,-81.8993	0/1:82:41,40:41:1411:40:1405:-102.002,0,-102.537	1/1:43:0,43:0:0:43:1533:-138.262,-12.9443,0	1/1:52:0,52:0:0:52:1864:-168.039,-15.6536,0	1/1:90:0,90:0:0:90:3232:-291.101,-27.0927,0	1/1:70:0,70:0:0:70:2499:-225.162,-21.0721,0	1/1:42:0,42:0:0:42:1504:-135.655,-12.6433,0	0/1:298:141,157:141:4927:157:5624:-416.574,0,-353.874	1/1:163:1,162:1:32:162:5796:-518.555,-45.8686,0	0/1:118:89,29:89:3082:29:1021:-56.6787,0,-242.083	0/1:44:24,20:24:833:20:716:-51.5224,0,-62.0396	0/1:126:51,75:51:1801:75:2692:-204.508,0,-124.44	1/1:78:0,78:0:0:78:2784:-250.801,-23.4803,0	1/1:291:1,290:1:36:290:10382:-930.7,-84.0015,0	0/1:242:110,132:110:3746:132:4710:-351.19,0,-264.49	0/1:33:20,13:20:656:13:468:-32.5257,0,-49.4098	0/1:412:239,173:239:8384:173:6208:-434.79,0,-630.551	0/1:117:55,62:55:1911:62:2217:-164.573,0,-137.042	1/1:73:0,73:0:0:73:2593:-233.618,-21.9752,0	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:4:3,1:3:93:1:36:-2.39415,0,-7.47261	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:22:12,10:12:398:10:356:-25.7586,0,-29.5142	1/1:151:0,151:0:0:151:5412:-487.209,-45.4555,0	1/1:107:0,107:0:0:107:3833:-345.158,-32.2102,0	1/1:71:0,71:0:0:71:2510:-226.152,-21.3731,0	0/1:5:2,3:2:42:3:108:-8.57002,0,-2.48475	0/1:251:153,98:153:5108:98:3507:-240.282,0,-384.303	0/1:45:27,18:27:911:18:648:-45.1055,0,-68.7472	0/1:157:83,74:83:2893:74:2652:-191.664,0,-213.34	0/1:52:23,29:23:801:29:1040:-78.2608,0,-56.7531	1/1:43:0,43:0:0:43:1548:-139.613,-12.9443,0	1/1:112:0,112:0:0:112:3988:-359.112,-33.7154,0	1/1:148:0,148:0:0:148:5296:-476.775,-44.5524,0	0/1:205:114,91:114:3823:91:3244:-230.469,0,-282.553	1/1:110:0,110:0:0:110:3930:-353.893,-33.1133,0	1/1:187:0,185:0:0:185:6637:-597.045,-55.6906,0	1/1:235:2,233:2:72:233:8328:-742.693,-63.9053,0	0/1:19:15,4:15:517:4:144:-7.59405,0,-41.135	1/1:146:0,146:0:0:146:5209:-468.95,-43.9504,0	1/1:48:0,48:0:0:48:1711:-154.275,-14.4494,0	0/1:27:11,16:11:392:16:572:-43.6856,0,-27.4922	0/1:220:118,102:118:4057:102:3652:-261.721,0,-299.09	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	0/1:21:13,8:13:449:8:288:-19.9458,0,-34.4159	0/1:30:11,19:11:388:19:684:-52.8594,0,-26.2265	1/1:75:0,75:0:0:75:2692:-242.524,-22.5773,0	0/1:142:93,48:93:3271:48:1724:-112.64,0,-251.804	0/1:8:6,2:6:208:2:72:-4.42848,0,-16.6508	0/1:177:107,70:107:3733:70:2516:-173.409,0,-282.888	0/1:235:132,103:132:4622:103:3661:-258.952,0,-345.401	0/1:96:51,45:51:1734:45:1610:-116.291,0,-127.434	0/1:152:106,46:106:3701:46:1652:-103.212,0,-287.535	1/1:141:0,141:0:0:141:5049:-454.554,-42.4452,0	0/1:143:103,40:103:3575:40:1432:-86.1303,0,-278.907	0/1:36:23,13:23:779:13:468:-31.6226,0,-59.5812	0/1:112:56,56:56:1996:56:1989:-145.568,0,-146.199	0/1:82:48,34:48:1667:34:1220:-85.4223,0,-125.626	0/1:35:22,13:22:784:13:466:-31.7426,0,-60.3479	1/1:80:0,80:0:0:80:2864:-257.989,-24.0824,0	1/1:63:0,63:0:0:63:2268:-204.382,-18.9649,0	1/1:159:0,159:0:0:159:5668:-510.243,-47.8638,0	1/1:211:0,211:0:0:211:7564:-680.798,-63.5173,0	0/1:209:102,107:102:3459:107:3817:-280.81,0,-248.603	1/1:118:3,115:3:108:115:4113:-360.279,-25.4464,0	0/1:27:19,8:19:578:8:284:-17.7755,0,-44.1796	1/1:140:0,140:0:0:140:5009:-450.955,-42.1442,0	0/1:201:104,97:104:3591:97:3460:-251.106,0,-262.888	1/1:316:0,316:0:0:316:11305:-1016.96,-95.1255,0	1/1:88:0,88:0:0:88:3156:-284.265,-26.4906,0	0/1:66:31,35:31:1059:35:1252:-93.1171,0,-75.7427	1/1:63:0,63:0:0:63:2264:-204.022,-18.9649,0	0/1:98:53,45:53:1846:45:1604:-115.149,0,-136.915	0/1:33:17,16:17:597:16:576:-42.241,0,-44.1221	1/1:77:0,77:0:0:77:2768:-249.361,-23.1793,0	1/1:63:0,63:0:0:63:2256:-203.303,-18.9649,0	1/1:67:1,64:1:32:64:2284:-202.596,-16.7009,0	0/1:132:73,59:73:2536:59:2116:-150.973,0,-188.751	0/1:53:39,14:39:1373:14:504:-29.7435,0,-107.912	1/1:68:0,68:0:0:68:2436:-219.495,-20.47,0	1/1:87:2,85:2:72:85:3044:-267.353,-19.3529,0
chr05	14678151	.	T	G	138080	PASS	AB=0.489346;ABP=7.08194;AC=140;AF=0.744681;AN=188;AO=7128;CIGAR=1X;DP=9251;DPB=9251;DPRA=0;EPP=15481.3;EPPR=4606.53;GTI=0;LEN=1;MEANALT=1.03191;MQM=38.9132;MQMR=41.2542;NS=94;NUMALT=1;ODDS=3.89674;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=254025;QR=75777;RO=2120;RPL=7126;RPP=15463.9;RPPR=4597.85;RPR=2;RUN=1;SAF=7126;SAP=15463.9;SAR=2;SRF=2119;SRP=4597.85;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:49:23,26:23:820:26:932:-60.8013,0,-54.7569	1/1:148:1,147:1:36:147:5254:-422.607,-41.1648,0	0/1:127:52,75:52:1863:75:2657:-175.895,0,-119.178	1/1:154:3,151:3:104:151:5407:-452.123,-36.8304,0	1/1:148:0,148:0:0:148:5289:-445.039,-44.5524,0	1/1:102:0,102:0:0:102:3597:-291.657,-30.7051,0	0/1:106:62,44:62:2211:44:1565:-104.138,0,-162.812	1/1:117:0,116:0:0:116:4140:-335.832,-34.9195,0	0/1:62:41,21:41:1468:21:756:-42.4409,0,-105.215	1/1:123:0,123:0:0:123:4399:-379.813,-37.0267,0	1/1:66:0,66:0:0:66:2350:-203.003,-19.868,0	0/1:74:35,39:35:1241:39:1375:-89.9804,0,-83.0891	0/1:66:41,25:41:1476:25:881:-51.6045,0,-105.218	0/1:79:38,41:38:1353:41:1472:-100.769,0,-93.3594	1/1:56:0,56:0:0:56:2003:-171.795,-16.8577,0	1/1:51:0,51:0:0:51:1824:-154.842,-15.3525,0	1/1:67:0,67:0:0:67:2408:-194.664,-20.169,0	1/1:37:0,37:0:0:37:1328:-108.221,-11.1381,0	1/1:43:0,43:0:0:43:1527:-124.927,-12.9443,0	0/1:147:79,68:79:2828:68:2417:-165.023,0,-204.005	1/1:105:0,105:0:0:105:3732:-314.978,-31.6082,0	0/1:84:55,29:55:1980:29:1036:-65.6367,0,-150.275	0/1:81:45,36:45:1605:36:1296:-86.9959,0,-114.777	0/1:33:9,24:9:320:24:846:-61.0401,0,-18.0418	1/1:73:0,73:0:0:73:2597:-220.081,-21.9752,0	1/1:400:0,400:0:0:400:14271:-1255.47,-120.412,0	0/1:195:106,89:106:3803:89:3196:-210.566,0,-268.565	0/1:46:26,20:26:936:20:720:-47.5787,0,-66.9106	0/1:363:168,195:168:6019:195:6905:-497.694,0,-423.35	0/1:111:51,60:51:1814:60:2145:-148.128,0,-122.447	1/1:104:0,104:0:0:104:3722:-321.077,-31.3071,0	0/1:8:4,4:4:144:4:144:-10.0439,0,-10.3115	1/1:20:1,19:1:36:19:680:-54.4742,-2.56611,0	0/1:10:8,2:8:275:2:72:-3.1574,0,-20.5141	1/1:4:0,4:0:0:4:144:-12.0108,-1.20412,0	0/1:13:6,7:6:216:7:248:-16.6586,0,-13.6143	1/1:232:0,232:0:0:232:8258:-721.792,-69.839,0	1/1:174:1,173:1:36:173:6167:-517.717,-48.9247,0	1/1:61:0,61:0:0:61:2176:-176.386,-18.3628,0	0/1:5:3,2:3:108:2:72:-4.93129,0,-8.16742	0/1:225:108,117:108:3847:117:4172:-284.741,0,-264.589	0/1:59:28,31:28:1004:31:1088:-74.812,0,-68.0026	0/1:72:42,30:42:1508:30:1068:-69.4203,0,-106.895	0/1:85:45,40:45:1612:40:1419:-96.9942,0,-114.749	1/1:68:0,68:0:0:68:2418:-208.392,-20.47,0	1/1:67:0,66:0:0:66:2359:-207.523,-19.868,0	1/1:140:0,140:0:0:140:4975:-404.434,-42.1442,0	0/1:186:90,96:90:3213:96:3432:-239.519,0,-226.915	1/1:141:1,140:1:36:140:4941:-424.44,-38.9242,0	1/1:138:0,138:0:0:138:4944:-426.322,-41.5421,0	1/1:110:0,110:0:0:110:3912:-342.904,-33.1133,0	0/1:16:6,10:6:212:10:360:-26.4298,0,-14.2244	1/1:252:0,252:0:0:252:8969:-727.123,-75.8596,0	1/1:75:0,75:0:0:75:2696:-237.125,-22.5773,0	0/1:20:6,14:6:216:14:500:-34.5412,0,-12.3519	0/1:165:81,84:81:2874:84:2957:-200.982,0,-198.251	1/1:53:1,52:1:36:52:1837:-156.367,-12.4336,0	0/1:9:6,3:6:216:3:108:-7.14955,0,-16.6601	0/1:23:9,14:9:324:14:500:-36.9504,0,-21.9465	1/1:85:0,85:0:0:85:3052:-256.654,-25.5876,0	0/1:93:47,46:47:1683:46:1626:-111.974,0,-120.036	0/1:13:5,8:5:180:8:288:-21.1143,0,-12.2832	0/1:263:142,121:142:5104:121:4302:-296.993,0,-373.288	0/1:224:114,110:114:4084:110:3931:-271.492,0,-289.413	0/1:46:20,26:20:707:26:932:-65.168,0,-45.8119	0/1:62:35,27:35:1260:27:957:-64.403,0,-91.9881	1/1:195:0,195:0:0:195:6949:-600.662,-58.7009,0	0/1:87:54,33:54:1931:33:1173:-74.3544,0,-143.965	0/1:42:20,22:20:720:22:792:-54.6517,0,-49.2184	0/1:48:33,15:33:1175:15:540:-29.5872,0,-84.5165	0/1:75:32,43:32:1135:43:1527:-111.144,0,-78.1258	0/1:21:12,9:12:432:9:324:-21.8753,0,-32.0574	1/1:89:0,89:0:0:89:3179:-257.495,-26.7917,0	1/1:50:0,50:0:0:50:1792:-146.151,-15.0515,0	1/1:119:0,119:0:0:119:4259:-360.616,-35.8226,0	1/1:212:1,211:1:36:211:7551:-648.534,-60.2974,0	0/1:118:59,58:59:2071:58:2032:-129.086,0,-139.316	1/1:75:0,75:0:0:75:2681:-217.741,-22.5773,0	0/1:9:8,1:8:284:1:36:-0.536889,0,-21.7603	1/1:136:2,134:2:63:134:4794:-398.499,-35.0935,0	0/1:82:33,49:33:1175:49:1739:-115.604,0,-74.9035	1/1:299:0,299:0:0:299:10661:-919.968,-90.008,0	1/1:110:0,110:0:0:110:3910:-337.779,-33.1133,0	0/1:44:20,24:20:720:24:852:-60.6313,0,-50.3043	1/1:50:0,50:0:0:50:1778:-154.03,-15.0515,0	0/1:133:68,65:68:2428:65:2336:-159.954,0,-174.057	0/1:56:34,22:34:1215:22:788:-46.4172,0,-86.4909	1/1:79:0,79:0:0:79:2836:-230.548,-23.7814,0	1/1:57:0,57:0:0:57:2031:-165.48,-17.1587,0	1/1:57:1,56:1:36:56:2008:-168.215,-15.2672,0	0/1:127:63,64:63:2256:64:2255:-151.962,0,-156.65	0/1:68:36,32:36:1292:32:1133:-77.4949,0,-92.9637	1/1:96:0,96:0:0:96:3412:-294.223,-28.8989,0	1/1:83:0,83:0:0:83:2906:-250.716,-24.9855,0
chr05	16419522	.	TAAGAAAAAAGAAAAGAAAA	TAAAGAAAAAAGAAAAGAAAA	78208.5	PASS	AB=0.482932;ABP=10.0522;AC=141;AF=0.75;AN=188;AO=4038;CIGAR=1M1I19M;DP=5485;DPB=5688.2;DPRA=0;EPP=8762.73;EPPR=3066.96;GTI=0;LEN=1;MEANALT=1.37234;MQM=47.9733;MQMR=59.9072;NS=94;NUMALT=1;ODDS=5.55089;PAIRED=0;PAIREDR=0;PAO=1.5;PQA=29.5;PQR=29.5;PRO=1.5;QA=138647;QR=49241;RO=1411;RPL=4037;RPP=8762.73;RPPR=3066.96;RPR=1;RUN=1;SAF=4038;SAP=8771.42;SAR=0;SRF=1411;SRP=3066.96;SRR=0;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:20,30:20:694:30:1039:-75.8433,0,-47.4178	1/1:55:0,55:0:0:55:1875:-164.402,-16.5567,0	0/1:146:76,69:76:2657:69:2379:-164.219,0,-195.103	1/1:89:1,88:1:35:88:2988:-265.117,-23.293,0	1/1:58:0,58:0:0:58:1996:-179.543,-17.4597,0	1/1:30:0,30:0:0:30:1003:-88.3341,-9.0309,0	0/1:15:9,6:9:315:6:208:-14.5038,0,-24.1732	1/1:91:0,91:0:0:91:3142:-275.2,-27.3937,0	0/1:79:34,44:34:1175:44:1498:-107.649,0,-82.0859	1/1:60:0,60:0:0:60:2091:-187.993,-18.0618,0	1/1:43:0,43:0:0:43:1467:-132.067,-12.9443,0	0/1:76:40,36:40:1397:36:1242:-86.1054,0,-103.15	0/1:55:26,29:26:920:29:1007:-71.8163,0,-66.5614	0/1:40:18,21:18:627:21:708:-51.7697,0,-44.6562	1/1:34:0,34:0:0:34:1180:-106.28,-10.235,0	1/1:34:0,34:0:0:34:1183:-106.542,-10.235,0	1/1:20:0,20:0:0:20:685:-60.2441,-6.0206,0	1/1:15:0,15:0:0:15:523:-46.012,-4.51545,0	1/1:19:0,19:0:0:19:644:-56.861,-5.71957,0	0/1:112:52,57:52:1816:57:1935:-140.99,0,-130.628	1/1:87:0,87:0:0:87:3004:-269.928,-26.1896,0	0/1:103:61,38:61:2132:38:1336:-89.1921,0,-161.995	0/1:104:63,40:63:2214:40:1386:-93.5865,0,-168.349	0/1:54:13,41:13:457:41:1412:-110.748,0,-25.209	1/1:81:0,81:0:0:81:2768:-248.55,-24.3834,0	1/1:92:0,91:0:0:91:3123:-278.408,-27.3937,0	0/1:199:68,130:68:2363:130:4529:-346.486,0,-152.972	0/1:21:9,12:9:317:12:411:-30.9196,0,-22.2272	0/1:125:68,56:68:2357:56:1909:-133.098,0,-174.736	0/1:64:30,34:30:1051:34:1166:-85.7616,0,-75.636	1/1:45:0,45:0:0:45:1552:-139.687,-13.5464,0	0/1:4:2,2:2:66:2:72:-5.61541,0,-5.06406	1/1:20:0,20:0:0:20:700:-63.1842,-6.0206,0	1/1:7:0,7:0:0:7:244:-21.6691,-2.10721,0	1/1:22:0,22:0:0:22:759:-66.7416,-6.62266,0	0/1:16:11,5:11:380:5:168:-10.278,0,-29.7162	1/1:99:0,98:0:0:98:3300:-294.403,-29.5009,0	1/1:80:0,79:0:0:79:2694:-241.863,-23.7814,0	1/1:23:0,23:0:0:23:790:-69.4539,-6.92369,0	0/1:6:5,1:5:177:1:36:-1.67452,0,-14.4709	0/1:68:32,34:32:1107:34:1172:-85.4136,0,-79.7816	0/1:25:13,11:13:457:11:359:-24.9965,0,-33.8805	0/1:146:80,65:80:2781:65:2200:-153.833,0,-206.678	0/1:32:20,12:20:705:12:420:-28.4172,0,-54.1427	1/1:29:0,28:0:0:28:955:-85.7524,-8.42884,0	1/1:51:0,51:0:0:51:1755:-156.777,-15.3525,0	1/1:88:0,88:0:0:88:3035:-265.85,-26.4906,0	0/1:91:47,43:47:1622:43:1484:-106.128,0,-118.446	1/1:61:0,61:0:0:61:2108:-189.601,-18.3628,0	1/1:63:0,63:0:0:63:2203:-197.976,-18.9649,0	1/1:85:0,85:0:0:85:2913:-260.042,-25.5876,0	0/1:10:3,7:3:105:7:248:-19.6009,0,-6.78567	1/1:76:0,76:0:0:76:2655:-232.32,-22.8783,0	1/1:25:0,25:0:0:25:846:-75.807,-7.52575,0	0/1:11:3,8:3:106:8:280:-21.4916,0,-6.57783	0/1:107:52,55:52:1770:55:1889:-137.644,0,-127.372	1/1:81:0,80:0:0:80:2732:-245.372,-24.0824,0	0/1:7:2,5:2:71:5:176:-13.9169,0,-4.63485	0/1:13:7,5:7:244:5:172:-11.6287,0,-18.3435	1/1:69:0,69:0:0:69:2335:-209.899,-20.7711,0	0/1:48:25,23:25:872:23:795:-57.2657,0,-64.3477	0/1:7:6,1:6:205:1:36:-1.48202,0,-16.6779	0/1:96:57,39:57:2004:39:1348:-91.5603,0,-151.679	0/1:99:52,47:52:1823:47:1643:-118.028,0,-134.552	0/1:35:18,16:18:640:16:552:-39.2125,0,-47.3362	0/1:44:34,9:34:1195:9:307:-14.6372,0,-94.5926	1/1:74:0,74:0:0:74:2567:-230.775,-22.2762,0	0/1:110:82,28:82:2863:28:968:-54.1382,0,-224.802	0/1:34:16,17:16:554:17:584:-42.3874,0,-39.8942	0/1:43:20,23:20:708:23:796:-57.0511,0,-51.1022	0/1:28:13,15:13:463:15:487:-35.3753,0,-33.5786	0/1:19:8,11:8:277:11:376:-28.3839,0,-19.5473	1/1:123:0,123:0:0:123:4142:-363.504,-37.0267,0	1/1:63:0,63:0:0:63:2160:-189.447,-18.9649,0	1/1:93:0,93:0:0:93:3171:-284.876,-27.9958,0	1/1:105:0,105:0:0:105:3598:-323.356,-31.6082,0	0/1:122:54,66:54:1889:66:2309:-165.477,0,-133.806	1/1:81:0,81:0:0:81:2785:-244.151,-24.3834,0	0/1:15:9,6:9:319:6:199:-13.2883,0,-24.5364	1/1:41:0,41:0:0:41:1409:-126.786,-12.3422,0	0/1:81:35,46:35:1221:46:1596:-115.57,0,-85.8108	1/1:99:0,99:0:0:99:3386:-304.294,-29.802,0	1/1:23:0,23:0:0:23:788:-71.0969,-6.92369,0	0/1:55:22,33:22:757:33:1120:-84.3608,0,-51.8916	1/1:20:0,20:0:0:20:678:-61.2161,-6.0206,0	0/1:68:38,29:38:1335:29:1008:-70.3103,0,-99.9244	0/1:12:9,2:9:316:2:64:-2.32605,0,-25.1091	1/1:43:0,43:0:0:43:1462:-128.516,-12.9443,0	1/1:46:0,46:0:0:46:1552:-136.476,-13.8474,0	1/1:26:0,26:0:0:26:892:-80.4341,-7.82678,0	0/1:49:26,22:26:911:22:744:-52.3142,0,-67.5093	0/1:36:20,15:20:701:15:516:-35.7778,0,-52.5193	1/1:79:0,79:0:0:79:2734:-245.731,-23.7814,0	1/1:54:2,52:2:70:52:1786:-154.047,-9.60822,0
chr05	17907807	.	GTAGGGGAG	ATAGGGGAAG,ATGGGGAAG	133605	PASS	AB=0.460568,0.529108;ABP=50.1045,28.6725;AC=140,48;AF=0.744681,0.255319;AN=188;AO=4684,1846;CIGAR=1X6M1I2M,1X1M1X3M1X2M;DP=6605;DPB=7132.67;DPRA=0,1.04024;EPP=10174.2,4011.55;EPPR=0;GTI=0;LEN=10,9;MEANALT=2.2766,2.71429;MQM=59.4462,43.6159;MQMR=0;NS=94;NUMALT=2;ODDS=4.36907;PAIRED=0,0;PAIREDR=0;PAO=2.5,3.5;PQA=79,115;PQR=0;PRO=0;QA=163210,64329;QR=0;RO=0;RPL=4684,1846;RPP=10174.2,4011.55;RPPR=0;RPR=0,0;RUN=1,1;SAF=4684,1846;SAP=10174.2,4011.55;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:61:0,20,40:0:0:20,40:712,1362:-165.582,-107.548,-101.528,-58.0256,0,-45.9844	1/1:21:0,20,1:0:0:20,1:665,36:-59.7858,-6.0206,0,-56.9169,-2.80062,-56.6159	1/2:111:0,50,60:0:0:50,60:1730,2060:-303.762,-163.174,-148.123,-140.584,0,-122.522	1/1:67:0,66,0:0:0:66,0:2313,0:-207.993,-19.868,0,-207.993,-19.868,-207.993	1/1:19:0,19,0:0:0:19,0:672,0:-60.8068,-5.71957,0,-60.8068,-5.71957,-60.8068	1/1:35:0,34,0:0:0:34,0:1195,0:-107.531,-10.235,0,-107.531,-10.235,-107.531	1/2:67:0,38,29:0:0:38,29:1316,1034:-190.054,-83.1057,-71.6665,-107.297,0,-98.5676	1/1:130:0,129,0:0:0:129,0:4549,0:-409.185,-38.8329,0,-409.185,-38.8329,-409.185	1/2:65:0,32,33:0:0:32,33:1102,1164:-182.452,-92.9835,-83.3505,-89.8134,0,-79.8794	1/1:50:0,49,0:0:0:49,0:1725,0:-155.121,-14.7505,0,-155.121,-14.7505,-155.121	1/1:40:0,40,0:0:0:40,0:1389,0:-125.275,-12.0412,0,-125.275,-12.0412,-125.275	1/2:67:0,32,33:0:0:32,33:1101,1145:-180.341,-91.2139,-81.581,-89.1127,0,-79.1787	1/2:42:0,26,15:0:0:26,15:863,518:-111.007,-41.2138,-33.387,-69.7785,0,-65.263	1/2:54:0,29,22:0:0:29,22:985,754:-139.932,-60.0447,-51.3148,-79.9138,0,-73.2912	1/1:32:0,30,0:0:0:30,0:1028,0:-92.5211,-9.0309,0,-92.5211,-9.0309,-92.5211	1/1:37:0,36,0:0:0:36,0:1234,0:-110.92,-10.8371,0,-110.92,-10.8371,-110.92	1/1:23:0,22,0:0:0:22,0:744,0:-66.8932,-6.62266,0,-66.8932,-6.62266,-66.8932	1/1:18:0,18,0:0:0:18,0:632,0:-57.1891,-5.41854,0,-57.1891,-5.41854,-57.1891	1/1:45:0,44,0:0:0:44,0:1543,0:-138.735,-13.2453,0,-138.735,-13.2453,-138.735	1/2:186:0,80,105:0:0:80,105:2797,3665:-519.705,-292.179,-268.097,-227.513,0,-195.904	1/1:82:0,79,0:0:0:79,0:2750,0:-247.323,-23.7814,0,-247.323,-23.7814,-247.323	1/2:99:0,38,59:0:0:38,59:1341,2094:-278.347,-169.15,-157.71,-109.256,0,-91.4948	1/2:72:0,25,46:0:0:25,46:873,1611:-199.713,-128.716,-121.19,-70.9871,0,-57.1397	1/2:49:0,32,17:0:0:32,17:1093,592:-136.149,-47.5093,-37.8764,-88.9808,0,-83.8633	1/1:86:0,84,0:0:0:84,0:2926,0:-263.201,-25.2865,0,-263.201,-25.2865,-263.201	1/1:138:0,137,0:0:0:137,0:4766,0:-428.485,-41.2411,0,-428.485,-41.2411,-428.485	1/2:206:0,80,124:0:0:80,124:2780,4299:-567.824,-341.813,-317.73,-226.057,0,-188.73	1/2:21:0,11,10:0:0:11,10:384,352:-59.631,-28.3946,-25.0833,-31.5833,0,-28.573	1/2:207:0,104,100:0:0:104,100:3633,3527:-579.178,-283.816,-252.509,-295.393,0,-265.29	1/2:115:0,52,61:0:0:52,61:1809,2129:-315.472,-168.401,-152.748,-147.129,0,-128.766	1/1:53:0,52,0:0:0:52,0:1836,0:-165.14,-15.6536,0,-165.14,-15.6536,-165.14	1/2:12:0,7,5:0:0:7,5:248,180:-34.8955,-14.6915,-12.5843,-20.557,0,-19.0518	1/1:28:0,27,0:0:0:27,0:941,0:-84.6926,-8.12781,0,-84.6926,-8.12781,-84.6926	1/2:13:0,5,8:0:0:5,8:180,282:-37.5019,-22.8093,-21.3041,-15.0469,0,-12.6387	1/1:26:0,25,0:0:0:25,0:871,0:-78.3668,-7.52575,0,-78.3668,-7.52575,-78.3668	1/2:27:0,14,13:0:0:14,13:491,454:-76.4379,-36.5135,-32.2991,-40.2707,0,-36.3573	1/1:135:0,134,0:0:0:134,0:4639,0:-417.183,-40.338,0,-417.183,-40.338,-417.183	1/1:130:0,130,0:0:0:130,0:4528,0:-407.599,-39.1339,0,-407.599,-39.1339,-407.599	1/1:42:0,41,0:0:0:41,0:1431,0:-128.672,-12.3422,0,-128.672,-12.3422,-128.672	1/2:15:0,4,11:0:0:4,11:140,386:-42.2225,-30.8297,-29.6255,-11.7405,0,-8.42913	1/2:69:0,39,30:0:0:39,30:1348,1035:-192.162,-82.6644,-70.9243,-109.839,0,-100.808	1/2:38:0,14,24:0:0:14,24:492,849:-108.083,-68.0346,-63.8202,-40.3979,0,-33.1732	1/2:176:0,79,95:0:0:79,95:2702,3326:-483.474,-264.206,-240.425,-219.313,0,-190.715	1/2:32:0,15,16:0:0:15,16:531,545:-86.5845,-43.3247,-38.8093,-43.2798,0,-38.4633	1/1:21:0,21,0:0:0:21,0:736,0:-66.5624,-6.32163,0,-66.5624,-6.32163,-66.5624	1/1:73:0,73,0:0:0:73,0:2545,0:-229.268,-21.9752,0,-229.268,-21.9752,-229.268	1/1:118:0,118,0:0:0:118,0:4057,0:-365.192,-35.5215,0,-365.192,-35.5215,-365.192	1/2:168:0,83,85:0:0:83,85:2872,2919:-465.858,-232.681,-207.695,-233.46,0,-207.872	1/1:43:0,43,0:0:0:43,0:1485,0:-133.941,-12.9443,0,-133.941,-12.9443,-133.941	1/1:84:0,83,0:0:0:83,0:2897,0:-260.545,-24.9855,0,-260.545,-24.9855,-260.545	1/1:105:0,104,0:0:0:104,0:3663,0:-329.187,-31.3071,0,-329.187,-31.3071,-329.187	1/2:13:0,6,6:0:0:6,6:208,208:-33.5428,-16.6343,-14.8281,-16.9089,0,-15.1027	1/1:180:0,178,0:0:0:178,0:6188,0:-556.586,-53.5833,0,-556.586,-53.5833,-556.586	1/1:53:0,51,0:0:0:51,0:1801,0:-162.079,-15.3525,0,-162.079,-15.3525,-162.079	1/2:17:0,6,11:0:0:6,11:212,378:-47.6995,-30.4289,-28.6228,-17.6182,0,-14.3069	1/2:88:0,34,54:0:0:34,54:1207,1906:-250.599,-152.275,-142.04,-98.6755,0,-82.4199	1/1:9:0,9,0:0:0:9,0:320,0:-29.1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chr05	17907828	.	A	G	28790.8	PASS	AB=0.509407;ABP=5.70669;AC=48;AF=0.255319;AN=188;AO=1788;CIGAR=1X;DP=6770;DPB=6770;DPRA=1.00175;EPP=3885.6;EPPR=10819.1;GTI=0;LEN=1;MEANALT=1;MQM=43.5923;MQMR=59.2678;NS=94;NUMALT=1;ODDS=7.00088;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63692;QR=177078;RO=4981;RPL=1788;RPP=3885.6;RPPR=10819.1;RPR=0;RUN=1;SAF=1788;SAP=3885.6;SAR=0;SRF=4981;SRP=10819.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:21,38:21:752:38:1356:-100.69,0,-50.2096	0/0:24:23,1:23:809:1:36:0,-3.70371,-69.5607	0/1:116:60,56:60:2144:56:2008:-140.628,0,-158.234	0/0:70:70,0:70:2461:0:0:0,-21.0721,-221.655	0/0:20:20,0:20:701:0:0:0,-6.0206,-63.4117	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.273	0/1:71:43,28:43:1544:28:1008:-68.102,0,-117.88	0/0:143:143,0:143:5070:0:0:0,-43.0473,-456.284	0/1:62:31,31:31:1116:31:1112:-79.4313,0,-82.0516	0/0:50:50,0:50:1780:0:0:0,-15.0515,-160.413	0/0:47:47,0:47:1676:0:0:0,-14.1484,-149.896	0/1:69:36,33:36:1288:33:1165:-82.2636,0,-94.5669	0/1:41:26,15:26:928:15:536:-35.2361,0,-71.416	0/1:54:29,25:29:1040:25:862:-60.3345,0,-77.6363	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.724	0/0:39:39,0:39:1392:0:0:0,-11.7402,-125.508	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.2518	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8368	0/0:46:46,0:46:1614:0:0:0,-13.8474,-145.432	0/1:184:84,100:84:2944:100:3565:-258.452,0,-209.787	0/0:83:83,0:83:2956:0:0:0,-24.9855,-266.052	0/1:101:43,58:43:1521:58:2071:-154.498,0,-106.777	0/1:68:26,42:26:913:42:1512:-113.415,0,-61.9727	0/1:51:35,16:35:1238:16:564:-34.7998,0,-96.2873	0/0:87:87,0:87:3055:0:0:0,-26.1896,-275.108	0/0:144:144,0:144:5156:0:0:0,-43.3483,-463.818	0/1:211:90,121:90:3216:121:4324:-316.351,0,-226.078	0/1:21:11,10:11:392:10:360:-25.7195,0,-29.2984	0/1:212:112,100:112:3947:100:3560:-252.783,0,-290.991	0/1:118:57,61:57:2036:61:2183:-154.641,0,-147.946	0/0:56:56,0:56:2003:0:0:0,-16.8577,-180.525	0/1:12:7,5:7:248:5:180:-12.5843,0,-19.0518	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.4378	0/1:14:6,8:6:216:8:284:-21.1657,0,-15.5761	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4657	0/1:27:14,13:14:489:13:453:-32.1278,0,-36.1751	0/0:137:137,0:137:4891:0:0:0,-41.2411,-440.118	0/0:134:134,0:134:4656:0:0:0,-40.338,-418.786	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.362	0/1:15:4,11:4:144:11:387:-29.7881,0,-8.79817	0/1:75:45,30:45:1597:30:1068:-71.9071,0,-121.405	0/1:36:14,22:14:500:22:792:-59.231,0,-34.4991	0/1:170:78,92:78:2769:92:3253:-234.48,0,-198.213	0/1:31:15,16:15:536:16:564:-40.4525,0,-39.0119	0/0:24:24,0:24:852:0:0:0,-7.22472,-77.0004	0/0:71:71,0:71:2528:0:0:0,-21.3731,-227.769	0/0:125:125,0:125:4449:0:0:0,-37.6287,-400.279	0/1:165:87,78:87:3048:78:2789:-195.725,0,-224.558	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:90:89,0:89:3162:0:0:0,-26.7917,-284.339	0/0:111:111,0:111:3946:0:0:0,-33.4143,-354.958	0/1:13:7,6:7:248:6:212:-15.2028,0,-18.6802	0/0:186:186,0:186:6623:0:0:0,-55.9916,-596.002	0/0:52:52,0:52:1868:0:0:0,-15.6536,-167.718	0/1:16:5,11:5:180:11:396:-30.3936,0,-11.7352	0/1:90:38,52:38:1343:52:1845:-135.831,0,-93.8956	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:22:16,6:16:572:6:212:-12.5391,0,-45.1195	0/1:20:9,11:9:320:11:392:-29.3274,0,-23.1218	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.138	0/1:92:53,39:53:1881:39:1391:-95.7475,0,-141.871	0/1:13:6,7:6:216:7:252:-18.7178,0,-15.8771	0/1:100:47,53:47:1688:53:1885:-137.715,0,-122.086	0/1:147:74,73:74:2656:73:2620:-187.293,0,-194.96	0/1:70:39,31:39:1392:31:1112:-76.5777,0,-104.461	0/1:56:30,26:30:1072:26:924:-64.0828,0,-79.8991	0/0:117:117,0:117:4124:0:0:0,-35.2205,-371.276	0/1:165:54,111:54:1909:111:3969:-301.7,0,-122.355	0/1:39:23,16:23:808:16:560:-38.0305,0,-61.2775	0/1:45:25,20:25:892:20:693:-47.948,0,-67.0037	0/1:51:14,37:14:500:37:1304:-99.5193,0,-29.9269	0/1:35:14,21:14:489:21:747:-55.9693,0,-33.7661	0/0:115:115,0:115:4111:0:0:0,-34.6184,-370.005	0/0:67:67,0:67:2383:0:0:0,-20.169,-214.667	0/0:109:109,0:109:3908:0:0:0,-32.8123,-351.731	0/0:98:98,0:98:3501:0:0:0,-29.5009,-315.267	0/1:183:101,82:101:3578:82:2931:-202.986,0,-266.933	0/0:78:78,0:78:2768:0:0:0,-23.4803,-249.176	0/1:24:13,11:13:460:11:396:-27.9991,0,-34.2809	0/0:76:76,0:76:2702:0:0:0,-22.8783,-243.399	0/1:62:41,21:41:1449:21:735:-45.4087,0,-112.04	0/0:152:152,0:152:5422:0:0:0,-45.7566,-487.709	0/0:40:40,0:40:1420:0:0:0,-12.0412,-127.036	0/1:39:18,21:18:644:21:752:-55.118,0,-46.5366	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9227	0/1:60:32,28:32:1148:28:995:-69.7276,0,-85.5504	0/1:15:9,6:9:320:6:216:-14.8501,0,-24.6269	0/0:51:51,0:51:1832:0:0:0,-15.3525,-164.738	0/0:77:77,0:77:2728:0:0:0,-23.1793,-245.64	0/0:68:68,0:68:2432:0:0:0,-20.47,-219.054	0/1:133:65,68:65:2328:68:2405:-171.832,0,-169.669	0/1:35:14,21:14:485:21:756:-56.1478,0,-33.4302	0/0:73:73,0:73:2560:0:0:0,-21.9752,-229.464	0/0:53:53,0:53:1887:0:0:0,-15.9546,-170.094
chr05	18573176	.	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chr05	18573198	.	CAATG	CAAATG	128110	PASS	AB=0.696676;ABP=3298.34;AC=96;AF=0.510638;AN=188;AO=6923;CIGAR=1M1I4M;DP=9905;DPB=11293.8;DPRA=0;EPP=14725;EPPR=6035.3;GTI=16;LEN=1;MEANALT=1.52128;MQM=59.4588;MQMR=59.9409;NS=94;NUMALT=1;ODDS=0.417223;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=245819;QR=103364;RO=2928;RPL=36;RPP=14725;RPPR=6035.3;RPR=6887;RUN=1;SAF=6923;SAP=15036.1;SAR=0;SRF=2928;SRP=6361.08;SRR=0;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	0/1:102:16,86:16:571:86:3039:-242.966,0,-21.0182	0/1:93:28,64:28:988:64:2265:-175.797,0,-61.1823	0/1:271:86,184:86:3037:184:6541:-506.692,0,-192.036	0/1:210:66,143:66:2288:143:5075:-393.542,0,-143.036	1/1:88:7,81:7:247:81:2912:-239.32,-3.91931,0	0/1:5:4,1:4:139:1:36:-2.09312,0,-11.3455	0/1:95:25,70:25:885:70:2484:-195.217,0,-51.3707	0/1:146:33,113:33:1173:113:4007:-316.853,0,-61.9272	0/1:147:42,105:42:1458:105:3733:-291.821,0,-87.2619	0/1:61:27,34:27:952:34:1212:-91.0186,0,-67.6317	0/1:44:16,28:16:573:28:983:-75.5349,0,-38.6587	0/1:118:38,80:38:1347:80:2843:-220.091,0,-86.0083	0/1:101:43,58:43:1520:58:2063:-155.48,0,-106.687	0/1:42:13,29:13:457:29:1036:-80.9107,0,-28.8202	0/1:90:34,55:34:1206:55:1944:-148.083,0,-81.6979	0/1:69:30,39:30:1043:39:1385:-104.175,0,-73.4054	0/1:26:14,12:14:498:12:423:-30.5783,0,-37.3284	0/1:46:22,24:22:789:24:843:-62.2689,0,-57.4878	0/1:38:10,28:10:346:28:987:-77.7005,0,-20.0336	0/1:194:32,160:32:1136:160:5716:-456.166,0,-44.3936	0/1:209:61,146:61:2141:146:5188:-404.202,0,-130.361	0/1:195:31,164:31:1107:164:5831:-466.066,0,-41.2401	0/1:79:22,57:22:777:57:2023:-158.521,0,-46.4708	0/1:95:34,60:34:1179:60:2140:-164.3,0,-77.8976	0/1:126:17,109:17:599:109:3867:-310.183,0,-16.3081	0/1:292:105,187:105:3692:187:6623:-507.751,0,-244.585	0/1:267:62,203:62:2186:203:7211:-568.814,0,-116.963	0/1:29:12,17:12:431:17:600:-45.5993,0,-30.4008	0/1:166:45,120:45:1597:120:4257:-333.218,0,-93.9565	0/1:106:26,80:26:912:80:2847:-224.342,0,-50.4858	0/1:96:18,78:18:637:78:2760:-219.663,0,-28.7589	0/1:22:5,16:5:178:16:568:-44.8095,0,-9.72224	0/1:17:7,10:7:247:10:352:-26.8554,0,-17.4557	0/1:5:1,4:1:36:4:140:-11.4394,0,-2.09312	0/1:11:2,9:2:72:9:324:-26.1945,0,-3.52539	0/1:11:4,7:4:144:7:252:-19.6814,0,-10.0023	0/1:266:107,157:107:3819:157:5575:-422.077,0,-264.166	0/1:148:37,111:37:1316:111:3959:-311.678,0,-74.1848	0/1:46:22,23:22:787:23:815:-59.7648,0,-57.2484	1/1:9:0,9:0:0:9:320:-29.072,-2.70927,0	0/1:89:33,56:33:1168:56:2000:-153.347,0,-78.6346	0/1:48:13,35:13:463:35:1252:-98.4713,0,-27.5574	0/1:248:41,207:41:1446:207:7335:-585.344,0,-55.7802	0/1:71:26,45:26:913:45:1608:-123.626,0,-61.1133	0/1:76:34,41:34:1199:41:1468:-109.451,0,-85.278	0/1:179:45,133:45:1602:133:4722:-370.876,0,-90.5289	0/1:138:36,101:36:1279:101:3535:-276.765,0,-73.8721	0/1:164:35,128:35:1205:128:4552:-360.396,0,-59.3713	0/1:193:42,150:42:1487:150:5330:-421.644,0,-76.0064	0/1:115:36,76:36:1270:76:2711:-210.131,0,-80.5907	0/1:170:45,125:45:1581:125:4452:-349.636,0,-91.4013	0/1:8:1,7:1:36:7:248:-20.256,0,-1.19003	0/1:148:26,121:26:911:121:4317:-344.016,0,-37.7163	0/1:35:8,26:8:283:26:924:-72.9913,0,-15.3181	0/1:16:9,7:9:303:7:252:-18.2125,0,-22.7793	0/1:146:42,104:42:1490:104:3692:-288.127,0,-90.444	0/1:66:29,37:29:1025:37:1322:-99.0976,0,-72.2027	0/1:11:3,8:3:108:8:288:-22.9509,0,-6.76384	0/1:23:4,19:4:142:19:684:-54.9657,0,-6.20558	0/1:41:12,29:12:411:29:1024:-79.7885,0,-24.9752	0/1:145:54,89:54:1920:89:3154:-240.66,0,-129.669	0/1:12:2,10:2:72:10:352:-28.3772,0,-3.22436	0/1:197:100,97:100:3544:97:3427:-249.318,0,-259.867	0/1:219:47,169:47:1673:169:6015:-476.004,0,-85.5092	0/1:83:24,58:24:857:58:2055:-159.875,0,-52.412	0/1:63:11,52:11:391:52:1856:-148.293,0,-16.5646	0/1:236:46,187:46:1603:187:6583:-521.719,0,-74.0685	0/1:142:50,90:50:1748:90:3191:-244.897,0,-115.117	0/1:24:12,12:12:427:12:428:-31.6115,0,-31.5434	0/1:23:5,18:5:174:18:639:-50.8265,0,-9.07779	0/1:51:20,31:20:718:31:1108:-84.6338,0,-49.5947	0/1:22:9,13:9:313:13:468:-35.837,0,-21.8827	0/1:149:49,100:49:1754:100:3530:-272.944,0,-113.291	0/1:183:51,131:51:1782:131:4645:-363.052,0,-105.463	0/1:94:22,71:22:776:71:2501:-196.947,0,-41.8563	0/1:181:57,123:57:2016:123:4378:-339.732,0,-127.304	0/1:151:30,119:30:1058:119:4256:-337.899,0,-50.3319	0/1:101:52,49:52:1836:49:1731:-125.669,0,-135.115	0/1:35:12,22:12:417:22:788:-60.6613,0,-27.2775	0/1:83:24,59:24:850:59:2088:-162.987,0,-51.8339	0/1:104:17,86:17:587:86:3066:-244.55,0,-21.912	0/1:281:80,198:80:2799:198:7015:-547.152,0,-168.109	0/1:89:39,50:39:1402:50:1763:-132.118,0,-99.6846	0/1:73:29,44:29:1034:44:1559:-118.612,0,-71.3968	0/1:71:26,45:26:929:45:1599:-122.795,0,-62.5553	0/1:194:74,119:74:2609:119:4220:-321.347,0,-176.599	0/1:39:8,31:8:285:31:1078:-85.5446,0,-14.2545	0/1:89:26,63:26:927:63:2248:-175.746,0,-56.9566	0/1:80:27,51:27:930:51:1820:-140.213,0,-60.213	0/1:16:2,14:2:71:14:491:-39.6954,0,-1.92558	0/1:98:28,69:28:1003:69:2455:-191.469,0,-61.0308	0/1:100:36,63:36:1259:63:2234:-171.274,0,-83.5952	0/1:144:67,76:67:2350:76:2699:-199.526,0,-168.352	0/1:167:68,98:68:2418:98:3484:-263.512,0,-167.655
chr05	18815736	.	C	T	63576.6	PASS	AB=0.485795;ABP=16.7061;AC=48;AF=0.255319;AN=188;AO=3798;CIGAR=1X;DP=12582;DPB=12582;DPRA=1.52073;EPP=8250.26;EPPR=19066.4;GTI=1;LEN=1;MEANALT=1.06;MQM=59.9882;MQMR=59.9733;NS=94;NUMALT=1;ODDS=4.42475;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=135926;QR=314404;RO=8779;RPL=0;RPP=8250.26;RPPR=19066.4;RPR=3798;RUN=1;SAF=3798;SAP=8250.26;SAR=0;SRF=8779;SRP=19066.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:21,17:21:752:17:608:-43.6129,0,-56.5533	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.541	0/1:88:49,39:49:1756:39:1400:-99.8085,0,-131.833	0/0:146:146,0:146:5228:0:0:0,-43.9504,-470.658	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:60:42,18:42:1512:18:648:-40.5901,0,-118.313	0/0:93:93,0:93:3332:0:0:0,-27.9958,-300.097	0/1:90:50,40:50:1796:40:1417:-100.733,0,-134.826	0/0:60:60,0:60:2148:0:0:0,-18.0618,-193.587	0/0:239:239,0:239:8576:0:0:0,-71.9462,-771.834	0/1:114:52,62:52:1864:62:2232:-166.826,0,-133.722	0/1:71:37,34:37:1328:34:1220:-88.7337,0,-98.4491	0/1:47:21,26:21:756:26:928:-69.6885,0,-54.2188	0/0:57:57,0:57:2040:0:0:0,-17.1587,-183.872	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/0:114:114,0:114:4080:0:0:0,-34.3174,-367.386	0/1:65:40,25:40:1440:25:896:-61.3934,0,-110.331	0/0:95:95,0:95:3385:0:0:0,-28.5978,-304.865	0/1:40:25,15:25:896:15:525:-35.5369,0,-68.9192	0/1:50:28,22:28:1000:22:792:-56.5542,0,-75.2639	0/1:13:4,9:4:140:9:324:-25.5925,0,-9.03119	0/0:49:49,0:49:1748:0:0:0,-14.7505,-157.604	0/0:131:131,0:131:4692:0:0:0,-39.4349,-422.44	0/1:175:91,84:91:3260:84:3005:-217.999,0,-240.94	0/1:34:17,17:17:608:17:612:-45.1784,0,-44.817	0/1:111:61,50:61:2192:50:1780:-127.069,0,-164.131	0/1:47:30,17:30:1080:17:612:-41.265,0,-83.3648	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/1:484:288,196:288:10313:196:7017:-485.89,0,-782.393	0/0:378:377,0:377:13477:0:0:0,-113.488,-1212.36	0/1:327:159,168:159:5684:168:6024:-443.826,0,-413.243	0/0:769:769,0:769:27529:0:0:0,-231.492,-2476.79	0/1:637:345,291:345:12361:291:10421:-746.138,0,-920.659	0/0:143:143,0:143:5136:0:0:0,-43.0473,-462.38	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/0:249:249,0:249:8927:0:0:0,-74.9565,-803.408	0/1:161:75,86:75:2692:86:3076:-228.603,0,-194.058	0/1:72:38,34:38:1360:34:1224:-88.7929,0,-101.026	0/1:154:78,76:78:2792:76:2720:-198.685,0,-205.162	0/1:87:40,47:40:1428:47:1680:-125.29,0,-102.628	0/1:59:29,30:29:1040:30:1072:-79.0317,0,-75.3678	0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.691	0/0:113:113,0:113:4037:0:0:0,-34.0164,-363.517	0/0:86:85,0:85:3044:0:0:0,-25.5875,-273.83	0/1:72:49,23:49:1760:23:820:-52.4484,0,-137.01	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/0:81:81,0:81:2900:0:0:0,-24.3834,-261.236	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/1:415:165,250:165:5904:250:8962:-681.632,0,-406.542	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:46:46,0:46:1644:0:0:0,-13.8474,-148.249	0/1:248:119,129:119:4260:129:4574:-337.165,0,-308.923	0/1:72:37,35:37:1324:35:1252:-91.3109,0,-97.7879	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:422:185,237:185:6644:237:8491:-637.153,0,-471.001	0/1:440:218,222:218:7782:222:7941:-582.26,0,-567.957	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/1:69:40,29:40:1432:29:1044:-73.5037,0,-108.379	0/1:273:158,115:158:5676:115:4116:-288.444,0,-428.775	0/1:69:54,15:54:1936:15:540:-28.1655,0,-153.745	0/1:98:46,52:46:1652:52:1864:-138.538,0,-119.468	0/1:30:8,22:8:284:22:792:-62.5748,0,-16.8725	0/1:56:26,30:26:928:30:1076:-80.2952,0,-66.9806	0/0:92:92,0:92:3292:0:0:0,-27.6948,-296.499	0/1:104:31,73:31:1116:73:2618:-204.56,0,-69.4446	0/1:329:158,171:158:5663:171:6136:-453.299,0,-410.749	0/1:39:15,24:15:540:24:848:-64.8995,0,-37.1964	0/1:45:21,24:21:744:24:860:-64.1755,0,-53.738	0/1:395:243,151:243:8688:151:5374:-364.826,0,-662.631	0/0:67:67,0:67:2392:0:0:0,-20.169,-215.537	0/0:81:81,0:81:2888:0:0:0,-24.3834,-259.939	0/0:89:88,1:88:3137:1:36:0,-23.1934,-278.957	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/1:120:52,68:52:1872:68:2424:-182.293,0,-132.635	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/1:611:374,237:374:13370:237:8489:-580.079,0,-1019.17	0/0:58:58,0:58:2088:0:0:0,-17.4597,-188.19	0/1:72:41,31:41:1468:31:1108:-78.3568,0,-110.742	0/0:142:142,0:142:5092:0:0:0,-42.7463,-458.423	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.026	0/1:50:25,25:25:896:25:896:-65.9089,0,-65.9089	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/1:101:40,61:40:1440:61:2192:-167.141,0,-99.4937	0/1:15:10,5:10:360:5:180:-12.0366,0,-28.2289	0/0:67:66,1:66:2360:1:36:0,-16.5707,-209.06	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.863	0/0:252:252,0:252:9040:0:0:0,-75.8596,-813.575	0/1:569:257,312:257:9216:312:11156:-832.623,0,-658.109	0/1:76:23,52:23:824:52:1868:-145.462,0,-51.5463	0/0:170:170,0:170:6087:0:0:0,-51.1751,-547.797	0/0:91:91,0:91:3272:0:0:0,-27.3937,-294.699
chr05	18815748	.	G	A	187363	PASS	AB=0.512451;ABP=13.5543;AC=140;AF=0.744681;AN=188;AO=8797;CIGAR=1X;DP=12620;DPB=12620;DPRA=0;EPP=17275.4;EPPR=8151.03;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.9654;MQMR=59.9908;NS=94;NUMALT=1;ODDS=4.29034;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=313972;QR=136147;RO=3820;RPL=216;RPP=17275.4;RPPR=8151.03;RPR=8581;RUN=1;SAF=8797;SAP=19105.5;SAR=0;SRF=3820;SRP=8298.03;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:17,21:17:603:21:752:-56.5533,0,-43.1604	1/1:63:1,62:1:36:62:2198:-194.484,-15.3666,0	0/1:87:37,50:37:1309:50:1792:-135.373,0,-91.9199	1/1:144:0,144:0:0:144:5165:-464.987,-43.3483,0	1/1:42:0,42:0:0:42:1478:-133.31,-12.6433,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:58:18,40:18:644:40:1428:-111.358,0,-40.8309	1/1:92:0,92:0:0:92:3293:-296.587,-27.6948,0	0/1:90:40,50:40:1421:50:1784:-133.747,0,-101.093	1/1:62:0,62:0:0:62:2220:-200.064,-18.6639,0	1/1:239:1,238:1:36:238:8544:-765.357,-68.3479,0	0/1:114:62,52:62:2228:52:1872:-134.442,0,-166.466	0/1:68:31,37:31:1112:37:1332:-99.7123,0,-79.9213	0/1:46:26,20:26:936:20:720:-51.2814,0,-70.7087	1/1:57:0,57:0:0:57:2052:-184.951,-17.1587,0	1/1:68:0,68:0:0:68:2433:-219.224,-20.47,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	1/1:115:0,115:0:0:115:4089:-368.194,-34.6185,0	0/1:67:25,42:25:881:42:1512:-116.206,0,-59.4369	1/1:94:0,94:0:0:94:3384:-304.774,-28.2968,0	0/1:41:16,25:16:576:25:900:-68.9788,0,-39.8328	0/1:50:22,28:22:777:28:989:-74.2705,0,-55.1989	0/1:12:9,3:9:324:3:104:-6.09045,0,-25.8935	1/1:52:0,52:0:0:52:1853:-167.048,-15.6536,0	1/1:131:0,131:0:0:131:4667:-420.188,-39.4349,0	0/1:174:82,91:82:2952:91:3264:-241.542,0,-213.474	0/1:35:18,17:18:640:17:612:-44.8774,0,-47.3933	0/1:110:49,61:49:1734:61:2151:-160.739,0,-123.227	0/1:47:18,29:18:644:29:1032:-79.0451,0,-44.1422	1/1:32:0,32:0:0:32:1137:-102.637,-9.63296,0	0/1:482:195,287:195:6955:287:10235:-775.351,0,-480.916	1/1:381:1,380:1:36:380:13562:-1216.76,-111.094,0	0/1:328:168,160:168:6013:160:5722:-416.356,0,-442.535	1/1:775:0,775:0:0:775:27574:-2480.84,-233.298,0	0/1:633:290,343:290:10351:343:12299:-916.192,0,-740.956	1/1:143:0,143:0:0:143:5113:-460.312,-43.0473,0	1/1:44:0,44:0:0:44:1569:-141.5,-13.2453,0	1/1:247:0,247:0:0:247:8850:-796.476,-74.3544,0	0/1:160:85,75:85:3044:75:2681:-193.368,0,-226.025	0/1:72:36,36:36:1273:36:1292:-94.9096,0,-93.1968	0/1:158:78,79:78:2789:79:2836:-207.857,0,-203.627	0/1:87:47,40:47:1669:40:1401:-100.193,0,-124.288	0/1:59:29,30:29:1029:30:1069:-78.4352,0,-75.1604	1/1:63:0,63:0:0:63:2256:-203.289,-18.9649,0	1/1:113:0,113:0:0:113:4025:-362.437,-34.0164,0	1/1:83:0,83:0:0:83:2984:-268.791,-24.9855,0	0/1:74:25,49:25:885:49:1737:-134.336,0,-57.6903	1/1:40:0,40:0:0:40:1402:-126.473,-12.0412,0	1/1:80:0,80:0:0:80:2872:-258.716,-24.0824,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:414:250,164:250:8915:164:5851:-402.072,0,-677.706	1/1:57:0,57:0:0:57:2021:-182.159,-17.1587,0	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	0/1:248:131,117:131:4659:117:4127:-296.958,0,-344.808	0/1:74:35,39:35:1218:39:1404:-104.383,0,-87.6431	1/1:27:0,27:0:0:27:957:-86.4439,-8.12781,0	0/1:426:239,187:239:8530:187:6648:-470.157,0,-639.46	0/1:444:226,218:226:8052:218:7688:-558.298,0,-591.04	1/1:46:0,46:0:0:46:1646:-148.428,-13.8474,0	0/1:70:30,40:30:1068:40:1440:-108.798,0,-75.36	0/1:279:120,159:120:4270:159:5693:-428.499,0,-300.49	0/1:69:15,54:15:532:54:1928:-153.026,0,-27.442	0/1:99:52,47:52:1834:47:1639:-117.99,0,-135.535	0/1:32:24,8:24:864:8:288:-16.6344,0,-68.4496	0/1:57:31,26:31:1104:26:936:-67.4008,0,-82.5119	1/1:93:0,93:0:0:93:3278:-295.239,-27.9958,0	0/1:103:73,30:73:2605:30:1068:-65.426,0,-203.691	0/1:332:174,158:174:6181:158:5648:-408.497,0,-456.445	0/1:39:24,15:24:864:15:540:-37.1964,0,-66.3424	0/1:44:23,21:23:828:21:752:-54.7609,0,-61.5988	0/1:391:146,244:146:5198:244:8639:-659.187,0,-350.197	1/1:67:0,67:0:0:67:2404:-216.616,-20.169,0	1/1:83:0,83:0:0:83:2923:-262.428,-24.9855,0	1/1:92:1,91:1:36:91:3226:-286.962,-24.0965,0	1/1:62:0,62:0:0:62:2213:-199.433,-18.6639,0	0/1:123:68,55:68:2425:55:1961:-139.737,0,-181.478	1/1:56:0,56:0:0:56:2008:-180.993,-16.8577,0	0/1:610:239,371:239:8516:371:13222:-1006.15,0,-582.809	1/1:58:0,58:0:0:58:2063:-185.939,-17.4597,0	0/1:72:32,40:32:1137:40:1427:-107.052,0,-80.9628	1/1:144:0,144:0:0:144:5123:-461.21,-43.3483,0	1/1:53:0,53:0:0:53:1908:-171.984,-15.9546,0	0/1:50:26,24:26:921:24:845:-61.3156,0,-68.1537	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	0/1:102:61,41:61:2162:41:1476:-102.431,0,-164.138	0/1:15:5,10:5:180:10:360:-28.2289,0,-12.0366	1/1:67:1,66:1:36:66:2372:-210.139,-16.5707,0	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	1/1:254:0,254:0:0:254:9091:-818.162,-76.4616,0	0/1:571:314,257:314:11179:257:9220:-657.854,0,-834.113	0/1:77:54,23:54:1936:23:828:-51.6648,0,-151.337	1/1:170:0,170:0:0:170:6100:-548.965,-51.1751,0	1/1:90:0,90:0:0:90:3231:-291.01,-27.0927,0
chr05	18815762	.	G	T	359605	PASS	AB=0.489632;ABP=13.1412;AC=140;AF=0.744681;AN=188;AO=13398;CIGAR=1X;DP=18950;DPB=18950;DPRA=0;EPP=1811.05;EPPR=1395.99;GTI=1;LEN=1;MEANALT=1.12766;MQM=59.9798;MQMR=59.9823;NS=94;NUMALT=1;ODDS=6.30859;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=478792;QR=197138;RO=5539;RPL=378;RPP=25905.8;RPPR=11236.6;RPR=13020;RUN=1;SAF=8747;SAP=2722.17;SAR=4651;SRF=3805;SRP=1684.46;SRR=1734;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:35,20:35:1241:20:714:-48.0306,0,-95.4359	1/1:66:1,65:1:36:65:2336:-206.901,-16.2697,0	0/1:120:73,47:73:2590:47:1688:-116.083,0,-197.195	1/1:295:0,295:0:0:295:10577:-951.838,-88.8039,0	1/1:107:0,107:0:0:107:3807:-342.83,-32.2102,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:183:78,105:78:2774:105:3745:-282.161,0,-194.812	1/1:92:0,92:0:0:92:3291:-296.408,-27.6948,0	0/1:147:97,49:97:3423:49:1743:-112.988,0,-264.115	1/1:183:0,183:0:0:183:6507:-585.717,-55.0885,0	1/1:307:0,306:0:0:306:10953:-985.306,-92.1152,0	0/1:141:92,49:92:3300:49:1764:-116.599,0,-254.773	0/1:106:67,38:67:2361:38:1364:-91.0928,0,-180.778	0/1:155:87,68:87:3097:68:2428:-172.116,0,-232.294	1/1:149:0,149:0:0:149:5311:-478.127,-44.8535,0	1/1:120:0,120:0:0:120:4293:-386.546,-36.1236,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	1/1:116:0,116:0:0:116:4159:-374.492,-34.9195,0	0/1:172:74,98:74:2633:98:3496:-263.072,0,-185.439	1/1:181:0,181:0:0:181:6459:-581.398,-54.4864,0	0/1:97:58,39:58:2031:39:1393:-96.468,0,-153.857	0/1:146:72,74:72:2563:74:2620:-192.096,0,-186.956	0/1:112:59,53:59:2116:53:1896:-137.203,0,-156.993	1/1:103:0,103:0:0:103:3674:-330.863,-31.0061,0	1/1:434:0,434:0:0:434:15453:-1390.48,-130.647,0	0/1:353:168,185:168:5949:185:6623:-489.885,0,-429.258	0/1:76:38,38:38:1368:38:1368:-100.543,0,-100.543	0/1:310:134,176:134:4708:176:6276:-471.616,0,-330.565	0/1:126:63,63:63:2229:63:2246:-164.474,0,-162.934	1/1:151:0,151:0:0:151:5359:-482.447,-45.4555,0	0/1:481:193,287:193:6891:287:10276:-779.802,0,-475.4	1/1:389:0,389:0:0:389:13913:-1251.94,-117.101,0	0/1:326:167,159:167:5988:159:5708:-415.7,0,-440.889	1/1:770:0,768:0:0:768:27465:-2470.7,-231.191,0	0/1:628:289,339:289:10343:339:12130:-902.497,0,-741.743	1/1:342:0,341:0:0:341:12196:-1097.13,-102.651,0	1/1:106:0,106:0:0:106:3808:-342.916,-31.9092,0	1/1:251:0,251:0:0:251:9009:-810.779,-75.5585,0	0/1:162:86,76:86:3050:76:2705:-194.927,0,-225.961	0/1:165:81,84:81:2887:84:3016:-222,0,-210.397	0/1:191:100,91:100:3571:91:3259:-236.033,0,-264.101	0/1:179:92,87:92:3273:87:3108:-226.063,0,-240.898	0/1:162:88,74:88:3073:74:2637:-188.645,0,-228.033	1/1:138:0,138:0:0:138:4928:-443.658,-41.5421,0	1/1:184:0,184:0:0:184:6572:-591.563,-55.3895,0	1/1:86:0,86:0:0:86:3076:-277.069,-25.8886,0	0/1:159:59,99:59:2088:99:3544:-271.355,0,-140.373	1/1:170:0,170:0:0:170:6067:-546.134,-51.1751,0	1/1:176:0,176:0:0:176:6293:-566.463,-52.9813,0	1/1:129:0,129:0:0:129:4615:-415.514,-38.8329,0	0/1:424:256,168:256:9161:168:5999:-412.375,0,-696.824	1/1:57:0,57:0:0:57:2039:-183.781,-17.1587,0	1/1:86:0,86:0:0:86:3051:-274.818,-25.8886,0	0/1:254:136,118:136:4857:118:4233:-304.685,0,-360.815	0/1:168:75,93:75:2642:93:3332:-249.524,0,-187.452	1/1:69:0,69:0:0:69:2463:-221.924,-20.7711,0	0/1:426:242,184:242:8654:184:6596:-465.48,0,-650.612	0/1:449:226,223:226:8093:223:7959:-581.169,0,-593.223	1/1:129:0,128:0:0:128:4562:-410.388,-38.5318,0	0/1:177:85,92:85:2987:92:3296:-243.549,0,-215.781	0/1:284:121,160:121:4321:160:5723:-430.238,0,-304.116	0/1:181:66,115:66:2345:115:4124:-316.857,0,-156.821	0/1:229:119,110:119:4231:110:3936:-285.497,0,-312.034	0/1:88:58,30:58:2065:30:1068:-69.9414,0,-159.629	0/1:97:52,45:52:1808:45:1620:-116.89,0,-133.794	1/1:204:2,202:2:72:202:7186:-639.961,-54.5734,0	0/1:135:101,34:101:3591:34:1224:-69.828,0,-282.757	0/1:364:194,170:194:6912:170:6116:-440.962,0,-512.569	0/1:57:42,15:42:1504:15:532:-31.0544,0,-118.496	0/1:150:74,76:74:2618:76:2715:-199.439,0,-190.713	0/1:422:162,260:162:5769:260:9270:-707.16,0,-392.29	1/1:67:0,67:0:0:67:2412:-217.336,-20.169,0	1/1:82:0,82:0:0:82:2888:-259.697,-24.6845,0	1/1:287:1,286:1:36:286:10216:-915.769,-82.7973,0	1/1:190:0,190:0:0:190:6761:-608.567,-57.1957,0	0/1:174:119,55:119:4228:55:1968:-125.016,0,-328.321	1/1:55:0,55:0:0:55:1980:-178.474,-16.5567,0	0/1:609:241,368:241:8614:368:13163:-1001.14,0,-591.926	1/1:176:0,176:0:0:176:6296:-566.734,-52.9813,0	0/1:129:88,41:88:3111:41:1476:-94.3033,0,-241.384	1/1:309:0,309:0:0:309:10994:-989.359,-93.0183,0	1/1:175:2,173:2:72:173:6180:-549.446,-45.8435,0	0/1:141:75,66:75:2673:66:2352:-169.494,0,-198.369	1/1:151:2,149:2:68:149:5306:-471.249,-39.0277,0	0/1:265:137,128:137:4815:128:4591:-333.58,0,-353.734	0/1:45:35,10:35:1251:10:360:-19.198,0,-99.3479	1/1:65:0,65:0:0:65:2319:-208.969,-19.567,0	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	1/1:300:0,300:0:0:300:10735:-966.054,-90.309,0	0/1:664:359,305:359:12846:305:10882:-779.393,0,-956.057	0/1:167:118,49:118:4211:49:1752:-107.692,0,-328.899	1/1:326:0,326:0:0:326:11604:-1044.23,-98.1358,0	1/1:219:0,218:0:0:218:7801:-701.758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chr05	18815784	.	C	T	122282	PASS	AB=0.495269;ABP=5.16768;AC=48;AF=0.255319;AN=188;AO=5503;CIGAR=1X;DP=20154;DPB=20154;DPRA=1.21433;EPP=11943.9;EPPR=31784.7;GTI=0;LEN=1;MEANALT=1.07407;MQM=59.992;MQMR=59.9867;NS=94;NUMALT=1;ODDS=28.8766;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=196344;QR=516703;RO=14640;RPL=3796;RPP=1725;RPPR=713.091;RPR=1707;RUN=1;SAF=3797;SAP=1728.3;SAR=1706;SRF=8413;SRP=711.794;SRR=6227;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:44,37:44:1558:37:1324:-95.0787,0,-116.127	0/0:189:188,1:188:6687:1:36:0,-53.2964,-598.311	0/1:147:77,70:77:2741:70:2490:-180.1,0,-202.68	0/0:294:293,1:293:10332:1:36:0,-84.9045,-926.216	0/0:111:111,0:111:3896:0:0:0,-33.4143,-350.831	0/0:50:50,0:50:1772:0:0:0,-15.0515,-159.76	0/1:183:105,78:105:3731:78:2775:-194.904,0,-280.904	0/0:205:205,0:205:7259:0:0:0,-61.7111,-653.364	0/1:183:89,94:89:3158:94:3353:-246.898,0,-229.354	0/0:183:183,0:183:6457:0:0:0,-55.0885,-581.216	0/0:302:302,0:302:10527:0:0:0,-90.9111,-947.37	0/1:178:83,95:83:2899:95:3375:-250.384,0,-207.561	0/1:140:73,67:73:2574:67:2396:-173.753,0,-189.766	0/1:158:70,88:70:2480:88:3141:-235.352,0,-175.889	0/0:138:138,0:138:4891:0:0:0,-41.5421,-440.344	0/0:116:116,0:116:4061:0:0:0,-34.9195,-365.681	0/0:123:123,0:123:4329:0:0:0,-37.0267,-389.786	0/0:85:85,0:85:3001:0:0:0,-25.5875,-270.322	0/0:166:166,0:166:5788:0:0:0,-49.971,-521.043	0/1:175:99,76:99:3535:76:2698:-190.381,0,-265.679	0/0:189:188,0:188:6665:0:0:0,-56.5936,-599.569	0/1:95:38,57:38:1351:57:2044:-155.634,0,-93.2917	0/1:143:71,72:71:2509:72:2575:-188.95,0,-183.014	0/1:116:58,58:58:2040:58:2076:-152.191,0,-148.951	0/0:105:105,0:105:3713:0:0:0,-31.6081,-334.374	0/0:432:432,0:432:15352:0:0:0,-130.045,-1381.4	0/1:357:191,165:191:6720:165:5886:-422.326,0,-497.354	0/1:80:41,39:41:1444:39:1400:-102.217,0,-106.173	0/1:315:180,135:180:6398:135:4809:-338.142,0,-481.086	0/1:125:61,64:61:2165:64:2292:-168.913,0,-157.487	0/0:152:152,0:152:5419:0:0:0,-45.7566,-487.839	0/1:474:282,191:282:9944:191:6830:-472.023,0,-751.536	0/0:381:380,0:380:13356:0:0:0,-114.391,-1201.5	0/1:326:156,170:156:5502:170:6075:-448.715,0,-397.171	0/0:775:774,0:774:27145:0:0:0,-232.997,-2441.94	0/1:638:343,295:343:12029:295:10553:-757.615,0,-890.423	0/0:337:337,0:337:11953:0:0:0,-101.447,-1075.64	0/0:109:109,0:109:3883:0:0:0,-32.8123,-349.666	0/0:321:321,0:321:11289:0:0:0,-96.6306,-1015.92	0/1:165:76,89:76:2619:89:3160:-234.954,0,-186.285	0/1:166:88,78:88:3126:78:2783:-200.74,0,-230.234	0/1:183:84,98:84:2943:98:3508:-260.783,0,-209.958	0/1:175:83,92:83:2902:92:3281:-242.829,0,-208.734	0/1:152:68,84:68:2387:84:2991:-223.665,0,-169.329	0/0:134:134,0:134:4713:0:0:0,-40.338,-424.332	0/0:180:180,0:180:6351:0:0:0,-54.1854,-571.684	0/0:178:176,0:176:6265:0:0:0,-52.9813,-563.584	0/1:156:98,58:98:3461:58:2066:-139.25,0,-264.741	0/0:169:169,0:169:6023:0:0:0,-50.8741,-542.174	0/0:170:170,0:170:6031:0:0:0,-51.1751,-542.895	0/0:132:132,0:132:4685:0:0:0,-39.736,-421.813	0/1:423:169,254:169:5952:254:9097:-691.367,0,-408.459	0/0:143:143,0:143:5015:0:0:0,-43.0473,-451.501	0/0:85:85,0:85:3016:0:0:0,-25.5875,-271.67	0/1:245:117,128:117:4075:128:4577:-338.336,0,-293.187	0/1:169:95,74:95:3374:74:2643:-187.242,0,-253.003	0/0:68:68,0:68:2418:0:0:0,-20.47,-217.875	0/1:422:182,240:182:6400:240:8571:-644.353,0,-449.059	0/1:451:219,231:219:7753:231:8244:-606.149,0,-561.986	0/0:137:137,0:137:4881:0:0:0,-41.2411,-439.443	0/1:163:80,83:80:2847:83:2945:-216.218,0,-207.401	0/1:279:157,122:157:5618:122:4369:-309.395,0,-421.753	0/1:177:113,64:113:4031:64:2272:-151.461,0,-309.697	0/1:229:112,117:112:3971:117:4180:-307.447,0,-288.648	0/1:88:31,57:31:1112:57:2028:-156.302,0,-73.9007	0/1:102:49,53:49:1737:53:1888:-139.493,0,-125.907	0/0:201:199,2:199:7018:2:72:0,-53.6703,-624.849	0/1:134:32,102:32:1126:102:3636:-287.106,0,-61.3086	0/1:363:169,194:169:5951:194:6924:-513.953,0,-426.433	0/1:72:30,42:30:1053:42:1496:-113.26,0,-73.4044	0/1:152:75,77:75:2672:77:2740:-201.086,0,-194.97	0/1:415:256,159:256:8999:159:5677:-386.122,0,-684.839	0/0:128:128,0:128:4535:0:0:0,-38.5318,-408.319	0/0:145:145,0:145:5122:0:0:0,-43.6493,-460.251	0/0:294:293,1:293:10378:1:36:0,-84.9045,-930.351	0/0:184:184,0:184:6540:0:0:0,-55.3895,-588.686	0/1:256:138,118:138:4913:118:4192:-300.396,0,-365.256	0/0:181:181,0:181:6424:0:0:0,-54.4864,-578.247	0/1:599:359,240:359:12561:240:8578:-591.699,0,-950.02	0/0:185:185,0:185:6615:0:0:0,-55.6905,-595.43	0/1:170:84,86:84:2945:86:3076:-225.894,0,-214.109	0/0:304:303,0:303:10750:0:0:0,-91.2121,-967.191	0/0:168:168,0:168:5955:0:0:0,-50.573,-536.061	0/1:136:67,69:67:2363:69:2460:-180.715,0,-171.989	0/0:148:147,0:147:5177:0:0:0,-44.2514,-465.719	0/1:252:122,130:122:4322:130:4652:-342.983,0,-313.3	0/1:57:25,32:25:869:32:1131:-84.939,0,-61.3652	0/0:147:146,1:146:5095:1:36:0,-40.6531,-455.105	0/0:133:133,0:133:4715:0:0:0,-40.037,-424.511	0/0:296:295,1:295:10343:1:36:0,-85.5066,-927.217	0/1:670:309,361:309:10722:361:12807:-950.766,0,-763.199	0/1:162:49,113:49:1720:113:4028:-313.943,0,-106.315	0/0:177:177,0:177:6275:0:0:0,-53.2823,-564.846	0/0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chr05	19055306	.	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chr05	19904372	.	AGTA	AGTT,TGTT	126980	PASS	AB=0.452544,0.545076;ABP=68.756,62.3262;AC=145,43;AF=0.771277,0.228723;AN=188;AO=4924,1849;CIGAR=3M1X,1X2M1X;DP=6790;DPB=6790;DPRA=0,1.13184;EPP=10695.3,4018.06;EPPR=3.0103;GTI=2;LEN=1,4;MEANALT=1.75532,2.19643;MQM=37.9194,33.6539;MQMR=59.5;NS=94;NUMALT=2;ODDS=0.131655;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=175860,65162;QR=57;RO=2;RPL=0,0;RPP=10695.3,4018.06;RPPR=7.35324;RPR=4924,1849;RUN=1,1;SAF=0,0;SAP=10695.3,4018.06;SAR=4924,1849;SRF=1;SRP=3.0103;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:45:0,26,19:0:0:26,19:923,647:-108.127,-42.477,-34.6502,-65.9446,0,-60.225	1/1:121:0,121,0:0:0:121,0:4296,0:-337.996,-36.4246,0,-337.996,-36.4246,-337.996	1/1:108:0,107,1:0:0:107,1:3812,35:-306.401,-32.2102,0,-304.109,-29.6305,-303.808	1/1:188:0,187,0:0:0:187,0:6695,0:-572.541,-56.2926,0,-572.541,-56.2926,-572.541	1/2:40:0,28,12:0:0:28,12:1004,431:-106.254,-30.143,-21.7142,-76.4288,0,-72.8164	1/2:48:0,19,29:0:0:19,29:680,1003:-117.283,-67.6811,-61.9615,-49.9129,0,-41.1831	1/2:125:0,54,71:0:0:54,71:1924,2471:-324.665,-177.516,-161.26,-147.474,0,-126.101	1/2:107:0,56,51:0:0:56,51:1989,1819:-264.981,-120.326,-103.468,-144.962,0,-129.61	1/1:39:0,39,0:0:0:39,0:1378,0:-111.138,-11.7402,0,-111.138,-11.7402,-111.138	1/1:73:0,73,0:0:0:73,0:2608,0:-223.298,-21.9752,0,-223.298,-21.9752,-223.298	1/2:18:0,11,7:0:0:11,7:392,250:-49.1954,-18.582,-15.2707,-30.9442,0,-28.837	1/2:24:0,13,11:0:0:13,11:455,395:-58.6569,-25.5449,-21.6315,-33.4133,0,-30.1019	1/1:36:0,36,0:0:0:36,0:1261,0:-102.052,-10.8371,0,-102.052,-10.8371,-102.052	1/1:31:0,31,0:0:0:31,0:1108,0:-91.0835,-9.33193,0,-91.0835,-9.33193,-91.0835	1/1:47:0,47,0:0:0:47,0:1676,0:-143.498,-14.1484,0,-143.498,-14.1484,-143.498	1/2:28:0,15,13:0:0:15,13:540,465:-71.4293,-31.9789,-27.4634,-39.7645,0,-35.8511	1/2:24:0,7,17:0:0:7,17:248,600:-58.1971,-40.0455,-37.9383,-18.4648,0,-13.3473	1/1:36:0,36,0:0:0:36,0:1279,0:-102.79,-10.8371,0,-102.79,-10.8371,-102.79	1/2:20:0,10,10:0:0:10,10:360,354:-49.2067,-23.2946,-20.2843,-26.2173,0,-23.207	1/2:209:0,104,104:0:0:104,104:3732,3673:-553.352,-265.303,-233.996,-288.121,0,-256.814	1/2:108:0,43,64:0:0:43,64:1535,2249:-268.819,-152.77,-139.826,-116.135,0,-96.8689	1/2:153:0,64,89:0:0:64,89:2279,3152:-417.508,-238.519,-219.253,-179.328,0,-152.536	1/1:54:0,52,1:0:0:52,1:1847,36:-157.74,-15.6536,0,-155.12,-13.033,-154.819	1/1:83:0,81,1:0:0:81,1:2912,36:-244.146,-24.3834,0,-241.636,-21.8768,-241.335	1/1:51:0,50,0:0:0:50,0:1796,0:-148.688,-15.0515,0,-148.688,-15.0515,-148.688	1/1:118:0,115,2:0:0:115,2:4100,72:-355.57,-34.6185,0,-350.074,-29.0498,-349.472	1/2:181:0,65,116:0:0:65,116:2318,4074:-453.862,-280.658,-261.091,-173.523,0,-138.604	1/2:18:0,8,10:0:0:8,10:288,358:-47.3438,-25.3493,-22.9411,-22.3212,0,-19.3109	1/1:175:0,175,0:0:0:175,0:6264,0:-540.744,-52.6803,0,-540.744,-52.6803,-540.744	1/2:69:0,35,34:0:0:35,34:1256,1189:-174.107,-83.8811,-73.3451,-90.5393,0,-80.3043	1/2:77:0,27,50:0:0:27,50:964,1724:-200.059,-125.835,-117.708,-74.5534,0,-59.5019	1/1:16:0,15,1:0:0:15,1:540,36:-45.5489,-4.51545,0,-43.0402,-1.69284,-42.7392	1/2:28:0,23,5:0:0:23,5:828,179:-75.4304,-12.8305,-5.90678,-62.9159,0,-61.4108	1/1:68:0,68,0:0:0:68,0:2440,0:-196.594,-20.47,0,-196.594,-20.47,-196.594	1/1:13:0,12,1:0:0:12,1:432,36:-34.8606,-3.61236,0,-32.4808,-0.932638,-32.1798	1/1:69:0,69,0:0:0:69,0:2476,0:-200.673,-20.7711,0,-200.673,-20.7711,-200.673	1/1:64:0,64,0:0:0:64,0:2304,0:-202.666,-19.2659,0,-202.666,-19.2659,-202.666	1/2:184:0,80,103:0:0:80,103:2864,3647:-468.251,-251.539,-227.457,-216.845,0,-185.839	1/1:23:0,22,0:0:0:22,0:784,0:-61.3973,-6.62266,0,-61.3973,-6.62266,-61.3973	1/1:23:0,23,0:0:0:23,0:828,0:-69.3413,-6.92369,0,-69.3413,-6.92369,-69.3413	1/1:122:0,120,2:0:0:120,2:4292,70:-357.158,-36.1236,0,-352.323,-30.9856,-351.721	1/2:19:0,8,11:0:0:8,11:288,384:-48.1526,-26.1892,-23.781,-22.2834,0,-18.9721	1/2:174:0,76,98:0:0:76,98:2713,3423:-443.948,-239.9,-217.022,-204.368,0,-174.867	1/2:40:0,20,20:0:0:20,20:716,720:-108.156,-52.5131,-46.4925,-55.9754,0,-49.9548	1/1:30:0,30,0:0:0:30,0:1051,0:-90.586,-9.0309,0,-90.586,-9.0309,-90.586	1/1:67:0,67,0:0:0:67,0:2400,0:-209.617,-20.169,0,-209.617,-20.169,-209.617	1/1:120:0,119,0:0:0:119,0:4255,0:-340.737,-35.8226,0,-340.737,-35.8226,-340.737	1/2:138:0,65,73:0:0:65,73:2320,2564:-365.068,-184.505,-164.939,-180.892,0,-158.917	1/2:96:0,27,69:0:0:27,69:960,2440:-248.508,-174.554,-166.426,-74.2854,0,-53.5143	1/2:110:0,59,51:0:0:59,51:2111,1812:-297.287,-132.676,-114.915,-164.943,0,-149.59	1/2:127:0,72,55:0:0:72,55:2588,1951:-352.797,-146.78,-125.106,-206.356,0,-189.799	1/2:35:0,31,4:0:0:31,4:1112,143:-95.657,-10.812,-1.48005,-85.1712,0,-83.9671	1/1:50:0,50,0:0:0:50,0:1784,0:-145.599,-15.0515,0,-145.599,-15.0515,-145.599	1/2:58:0,29,29:0:0:29,29:1032,1026:-159.209,-78.7565,-70.0267,-80.7904,0,-72.0605	1/1:41:0,41,0:0:0:41,0:1456,0:-117.476,-12.3422,0,-117.476,-12.3422,-117.476	1/1:129:0,129,0:0:0:129,0:4589,0:-384.078,-38.8329,0,-384.078,-38.8329,-384.078	1/2:37:0,11,26:0:0:11,26:391,912:-94.458,-66.8656,-63.5543,-27.9062,0,-20.0794	1/1:16:0,16,0:0:0:16,0:576,0:-50.9341,-4.81648,0,-50.9341,-4.81648,-50.9341	1/2:19:0,14,5:0:0:14,5:500,173:-52.1389,-13.0598,-8.84539,-39.4027,0,-37.8976	1/2:47:0,26,21:0:0:26,21:923,748:-121.537,-52.4862,-44.6594,-69.3692,0,-63.0475	1/1:38:0,38,0:0:0:38,0:1355,0:-113.662,-11.4391,0,-113.662,-11.4391,-113.662	1/1:11:0,11,0:0:0:11,0:377,0:-32.9813,-3.31133,0,-32.9813,-3.31133,-32.9813	1/2:149:0,47,100:0:0:47,100:1688,3542:-399.121,-268.279,-254.131,-130.982,0,-100.879	1/2:186:0,76,110:0:0:76,110:2712,3889:-490.694,-281.267,-258.389,-209.757,0,-176.644	1/1:47:0,46,1:0:0:46,1:1637,36:-136.227,-13.8474,0,-133.717,-11.0248,-133.416	1/1:55:0,55,0:0:0:55,0:1954,0:-167.653,-16.5567,0,-167.653,-16.5567,-167.653	1/1:115:0,115,0:0:0:115,0:4128,0:-353.118,-34.6185,0,-353.118,-34.6185,-353.118	1/1:77:0,77,0:0:0:77,0:2752,0:-235.476,-23.1793,0,-235.476,-23.1793,-235.476	1/1:12:1,11,0:1:36:11,0:383,0:-28.6023,-0.0140851,0,-28.9033,-3.31133,-31.8439	1/1:79:0,78,1:0:0:78,1:2804,36:-223.596,-23.4803,0,-221.435,-21.0452,-221.134	1/2:38:0,12,26:0:0:12,26:432,935:-103.068,-69.6352,-66.0228,-33.7717,0,-25.9449	1/2:22:0,16,6:0:0:16,6:576,214:-59.6348,-15.9613,-11.1448,-44.0002,0,-42.1941	1/2:79:0,33,45:0:0:33,45:1171,1600:-189.421,-106.192,-96.2583,-83.3414,0,-69.795	1/1:45:0,45,0:0:0:45,0:1620,0:-129.305,-13.5464,0,-129.305,-13.5464,-129.305	1/1:108:0,108,0:0:0:108,0:3814,0:-320.54,-32.5112,0,-320.54,-32.5112,-320.54	1/1:137:0,136,1:0:0:136,1:4872,36:-414.922,-40.9401,0,-412.302,-37.995,-412.001	1/2:58:0,20,36:0:0:20,36:711,1236:-131.897,-80.051,-74.0304,-51.8783,0,-41.0412	1/1:50:0,48,2:0:0:48,2:1716,66:-139.227,-14.4494,0,-134.676,-9.61081,-134.074	1/1:24:0,22,2:0:0:22,2:770,66:-61.6124,-6.62266,0,-57.0622,-1.78403,-56.4601	1/2:94:0,46,48:0:0:46,48:1648,1705:-244.857,-119.419,-105.572,-125.761,0,-111.312	1/2:127:0,60,67:0:0:60,67:2130,2336:-303.972,-151.059,-132.997,-153.214,0,-133.045	1/1:254:0,254,0:0:0:254,0:9089,0:-776.942,-76.4616,0,-776.942,-76.4616,-776.942	1/1:55:0,55,0:0:0:55,0:1967,0:-167.919,-16.5567,0,-167.919,-16.5567,-167.919	1/1:25:0,25,0:0:0:25,0:896,0:-76.5004,-7.52575,0,-76.5004,-7.52575,-76.5004	1/2:65:0,28,37:0:0:28,37:1000,1307:-172.766,-94.764,-86.3352,-78.334,0,-67.1959	1/2:57:0,23,34:0:0:23,34:817,1211:-151.119,-87.6452,-80.7215,-63.8054,0,-53.5704	1/1:33:1,32,0:1:21:32,0:1143,0:-91.1894,-7.83406,0,-91.4904,-9.63296,-93.0759	1/1:33:0,32,1:0:0:32,1:1148,25:-90.4295,-9.63296,0,-88.7537,-7.73433,-88.4527	1/1:33:0,33,0:0:0:33,0:1176,0:-94.0224,-9.93399,0,-94.0224,-9.93399,-94.0224	1/1:20:0,20,0:0:0:20,0:712,0:-58.8708,-6.0206,0,-58.8708,-6.0206,-58.8708	1/2:42:0,21,21:0:0:21,21:743,745:-106.388,-50.3055,-43.9839,-56.3961,0,-50.0745	1/2:38:0,13,25:0:0:13,25:449,880:-98.7846,-63.9623,-60.0489,-35.1482,0,-27.6225	1/1:118:0,118,0:0:0:118,0:4234,0:-362.441,-35.5215,0,-362.441,-35.5215,-362.441	1/1:49:0,49,0:0:0:49,0:1764,0:-152.303,-14.7505,0,-152.303,-14.7505,-152.303
chr05	20058609	.	CAACGGC	TAACGGT,TAATGGT	97004.5	PASS	AB=0.737329,0.261561;ABP=1325.41,1337.8;AC=142,46;AF=0.755319,0.244681;AN=188;AO=4448,733;CIGAR=1X5M1X,1X2M1X2M1X;DP=5185;DPB=5185;DPRA=0,1.08642;EPP=9661.72,1594.7;EPPR=0;GTI=10;LEN=7,7;MEANALT=1.58511,2.03846;MQM=51.6983,33.9577;MQMR=0;NS=94;NUMALT=2;ODDS=811.936;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=152271,25539;QR=0;RO=0;RPL=4448,733;RPP=9661.72,1594.7;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=9661.72,1594.7;SAR=4448,733;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:14:0,13,1:0:0:13,1:456,36:-41.0058,-3.91339,0,-38.1544,-0.711721,-37.8534	1/1:8:0,8,0:0:0:8,0:280,0:-25.5393,-2.40824,0,-25.5393,-2.40824,-25.5393	1/1:134:0,134,0:0:0:134,0:4707,0:-423.794,-40.338,0,-423.794,-40.338,-423.794	1/2:38:0,28,10:0:0:28,10:977,352:-106.531,-27.6306,-19.2018,-79.2395,0,-76.2292	1/2:23:0,10,13:0:0:10,13:324,464:-45.5775,-21.8323,-18.822,-24.0078,0,-20.0944	1/2:68:0,31,37:0:0:31,37:1069,1293:-188.484,-101.914,-92.5816,-86.9115,0,-75.7734	1/2:24:0,13,11:0:0:13,11:456,367:-66.4762,-29.354,-25.4406,-37.4598,0,-34.1485	1/1:76:0,76,0:0:0:76,0:2678,0:-240.981,-22.8783,0,-240.981,-22.8783,-240.981	1/2:68:0,54,14:0:0:54,14:1891,492:-192.907,-39.3334,-23.0778,-153.918,0,-149.704	1/2:49:0,39,10:0:0:39,10:1369,346:-137.824,-26.6596,-14.9194,-111.495,0,-108.485	1/1:130:0,130,0:0:0:130,0:4597,0:-413.084,-39.1339,0,-413.084,-39.1339,-413.084	1/2:60:0,47,13:0:0:47,13:1672,458:-172.926,-36.653,-22.5046,-136.619,0,-132.705	1/1:12:0,12,0:0:0:12,0:432,0:-39.2212,-3.61236,0,-39.2212,-3.61236,-39.2212	1/1:12:0,12,0:0:0:12,0:388,0:-32.2353,-3.61236,0,-32.2353,-3.61236,-32.2353	1/1:7:0,7,0:0:0:7,0:248,0:-22.6642,-2.10721,0,-22.6642,-2.10721,-22.6642	1/2:30:0,18,12:0:0:18,12:580,421:-63.3836,-21.1675,-15.7489,-42.47,0,-38.8577	1/1:24:0,24,0:0:0:24,0:860,0:-77.7217,-7.22472,0,-77.7217,-7.22472,-77.7217	1/1:4:0,4,0:0:0:4,0:136,0:-12.5755,-1.20412,0,-12.5755,-1.20412,-12.5755	1/2:22:0,19,3:0:0:19,3:680,100:-63.744,-8.26595,-2.54638,-55.8096,0,-54.9065	1/2:32:0,24,8:0:0:24,8:841,267:-89.6528,-21.4735,-14.2488,-68.5119,0,-66.1037	1/2:36:0,28,8:0:0:28,8:889,268:-79.0986,-14.5451,-6.11625,-64.7985,0,-62.3903	1/1:8:0,8,0:0:0:8,0:280,0:-25.5393,-2.40824,0,-25.5393,-2.40824,-25.5393	1/1:28:0,26,2:0:0:26,2:901,69:-81.0023,-7.82678,0,-75.5289,-2.01517,-74.9268	1/2:18:0,15,3:0:0:15,3:484,108:-40.525,-5.20973,-0.694282,-35.5463,0,-34.6432	1/2:37:0,26,11:0:0:26,11:821,380:-79.0747,-19.499,-11.6723,-59.8215,0,-56.5102	1/1:39:0,39,0:0:0:39,0:1392,0:-125.579,-11.7402,0,-125.579,-11.7402,-125.579	1/1:85:0,80,5:0:0:80,5:2542,171:-208.285,-24.0824,0,-200.015,-15.5911,-198.51	1/2:9:0,4,5:0:0:4,5:128,173:-17.7671,-8.50228,-7.29816,-9.52258,0,-8.01743	1/1:36:0,36,0:0:0:36,0:1256,0:-113.342,-10.8371,0,-113.342,-10.8371,-113.342	1/1:46:0,40,6:0:0:40,6:1287,207:-105.412,-12.0412,0,-95.4867,-1.88849,-93.6805	1/1:11:0,11,0:0:0:11,0:373,0:-33.8952,-3.31133,0,-33.8952,-3.31133,-33.8952	1/1:259:0,259,0:0:0:259,0:8295,0:-678.795,-77.9668,0,-678.795,-77.9668,-678.795	1/2:203:0,150,53:0:0:150,53:4814,1843:-441.418,-92.8225,-47.668,-348.839,0,-332.885	1/1:44:0,44,0:0:0:44,0:1568,0:-141.408,-13.2453,0,-141.408,-13.2453,-141.408	1/1:463:0,463,0:0:0:463,0:16167,0:-1453.77,-139.377,0,-1453.77,-139.377,-1453.77	1/2:176:0,153,23:0:0:153,23:5440,798:-506.683,-63.621,-17.5634,-443.404,0,-436.48	1/1:40:0,40,0:0:0:40,0:1417,0:-127.825,-12.0412,0,-127.825,-12.0412,-127.825	1/2:90:0,68,22:0:0:68,22:2155,759:-194.313,-37.6364,-17.1663,-156.916,0,-150.293	1/2:52:0,42,10:0:0:42,10:1496,356:-150.415,-28.5586,-15.9154,-122.205,0,-119.195	1/2:52:0,23,29:0:0:23,29:731,1020:-102.853,-50.0236,-43.0999,-53.0899,0,-44.3601	1/1:7:0,7,0:0:0:7,0:224,0:-18.5543,-2.10721,0,-18.5543,-2.10721,-18.5543	1/1:55:0,55,0:0:0:55,0:1762,0:-144.517,-16.5567,0,-144.517,-16.5567,-144.517	1/2:40:0,32,8:0:0:32,8:1013,282:-86.6703,-13.5024,-3.86941,-73.3998,0,-70.9915	1/2:22:0,15,7:0:0:15,7:532,232:-62.0698,-18.7066,-14.1912,-43.6976,0,-41.5904	1/1:23:0,23,0:0:0:23,0:812,0:-73.4009,-6.92369,0,-73.4009,-6.92369,-73.4009	1/2:49:0,42,7:0:0:42,7:1492,244:-141.276,-19.6875,-7.04424,-121.931,0,-119.824	1/1:25:0,25,0:0:0:25,0:880,0:-79.5177,-7.52575,0,-79.5177,-7.52575,-79.5177	1/1:29:0,29,0:0:0:29,0:1036,0:-93.5539,-8.72987,0,-93.5539,-8.72987,-93.5539	1/2:18:0,10,8:0:0:10,8:356,271:-50.8568,-21.8284,-18.8181,-29.3709,0,-26.9627	1/2:19:0,13,6:0:0:13,6:459,210:-54.1077,-16.9935,-13.0801,-37.4588,0,-35.6526	1/2:35:0,24,11:0:0:24,11:838,377:-98.1398,-30.2371,-23.0124,-68.2421,0,-64.9308	1/2:185:0,154,31:0:0:154,31:5383,1069:-520.725,-84.08,-37.7214,-436.981,0,-427.649	1/2:49:0,40,9:0:0:40,9:1389,308:-137.689,-24.7626,-12.7214,-113.264,0,-110.554	1/2:20:0,8,12:0:0:8,12:284,411:-55.1069,-31.9553,-29.547,-23.4951,0,-19.8828	1/1:55:0,55,0:0:0:55,0:1931,0:-174.066,-16.5567,0,-174.066,-16.5567,-174.066	1/1:35:0,35,0:0:0:35,0:1120,0:-91.8828,-10.5361,0,-91.8828,-10.5361,-91.8828	1/2:5:0,2,3:0:0:2,3:68,107:-14.3409,-8.82823,-8.22617,-5.85565,0,-4.95256	1/1:149:0,149,0:0:0: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chr05	21123402	.	A	T	26824.8	PASS	AB=0.539121;ABP=41.7481;AC=46;AF=0.244681;AN=188;AO=1576;CIGAR=1X;DP=6239;DPB=6239;DPRA=0.894253;EPP=3425.25;EPPR=10102.5;GTI=2;LEN=1;MEANALT=1.04082;MQM=59.9975;MQMR=59.9974;NS=94;NUMALT=1;ODDS=0.117776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56108;QR=165920;RO=4659;RPL=0;RPP=3425.25;RPPR=10119.9;RPR=1576;RUN=1;SAF=0;SAP=3425.25;SAR=1576;SRF=2;SRP=10102.5;SRR=4657;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:20,27:20:712:27:968:-73.289,0,-50.2582	0/0:59:59,0:59:2107:0:0:0,-17.7608,-189.899	0/1:62:35,27:35:1228:27:968:-68.7735,0,-92.1572	0/0:132:132,0:132:4727:0:0:0,-39.736,-425.588	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/0:35:35,0:35:1224:0:0:0,-10.536,-110.461	0/1:67:18,49:18:644:49:1744:-137.075,0,-38.1216	0/0:152:152,0:152:5415:0:0:0,-45.7566,-487.48	0/1:51:27,24:27:968:24:856:-62.0086,0,-72.0848	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:48:48,0:48:1712:0:0:0,-14.4494,-154.363	0/1:56:19,37:19:661:37:1296:-100.082,0,-42.9539	0/1:58:31,27:31:1091:27:964:-69.6171,0,-81.039	0/1:77:38,39:38:1346:39:1396:-102.76,0,-98.2594	0/0:46:46,0:46:1639:0:0:0,-13.8474,-147.798	0/0:36:36,0:36:1287:0:0:0,-10.8371,-116.133	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/0:42:42,0:42:1478:0:0:0,-12.6433,-133.313	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.416	0/1:100:49,51:49:1751:51:1823:-134.247,0,-127.77	0/0:71:71,0:71:2527:0:0:0,-21.3731,-227.682	0/1:50:14,36:14:504:36:1286:-100.992,0,-30.6466	0/1:66:32,34:32:1148:34:1216:-89.8786,0,-83.7619	0/0:129:129,0:129:4623:0:0:0,-38.8329,-416.232	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/0:241:241,0:241:8599:0:0:0,-72.5482,-773.907	0/1:159:91,68:91:3264:68:2444:-172.351,0,-246.116	0/1:29:14,15:14:504:15:540:-40.2067,0,-36.9682	0/1:120:51,69:51:1828:69:2472:-186.61,0,-128.677	0/1:106:59,46:59:2093:46:1636:-115.561,0,-156.67	0/0:86:86,0:86:3039:0:0:0,-25.8886,-273.74	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:11:11,0:11:374:0:0:0,-3.31133,-33.9864	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/1:8:6,2:6:212:2:68:-4.04947,0,-17.0166	0/0:116:116,0:116:4116:0:0:0,-34.9195,-370.626	0/0:144:144,0:144:5107:0:0:0,-43.3483,-459.775	0/0:77:77,0:77:2735:0:0:0,-23.1793,-246.393	0/1:8:7,1:7:248:1:32:-0.791073,0,-20.256	0/1:88:46,42:46:1644:42:1504:-109.164,0,-121.758	0/0:33:33,0:33:1171:0:0:0,-9.93399,-105.697	0/1:117:57,60:57:2022:60:2129:-156.656,0,-147.031	0/1:40:18,22:18:625:22:760:-56.6747,0,-44.5313	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:68:68,0:68:2444:0:0:0,-20.47,-220.215	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/1:160:75,85:75:2692:85:3023:-224.137,0,-194.359	0/0:68:68,0:68:2421:0:0:0,-20.47,-218.144	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/0:49:49,0:49:1739:0:0:0,-14.7505,-156.794	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.401	0/0:64:63,0:63:2203:0:0:0,-18.9649,-198.174	0/1:9:5,4:5:180:4:140:-10.2353,0,-13.8428	0/1:74:39,35:39:1388:35:1256:-91.0691,0,-102.943	0/0:71:71,0:71:2536:0:0:0,-21.3731,-228.491	0/1:10:9,1:9:320:1:36:-0.587975,0,-26.1321	0/1:14:10,4:10:351:4:131:-7.89821,0,-27.7123	0/0:86:86,0:86:3048:0:0:0,-25.8886,-274.549	0/1:116:50,66:50:1771:66:2351:-176.929,0,-124.753	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:75:8,66:8:284:66:2364:-190.422,0,-3.30332	0/1:157:75,82:75:2677:82:2896:-213.613,0,-193.912	0/1:81:44,37:44:1576:37:1307:-93.5473,0,-117.748	0/1:39:17,22:17:604:22:775:-58.331,0,-42.9504	0/0:50:48,2:48:1686:2:72:0,-8.21478,-145.186	0/1:75:28,47:28:969:47:1671:-128.099,0,-64.9423	0/1:33:12,21:12:432:21:748:-57.7113,0,-29.2872	0/1:108:52,56:52:1868:56:1975:-145.513,0,-135.888	0/1:80:38,42:38:1360:42:1508:-111.932,0,-98.6182	0/1:19:11,8:11:396:8:288:-20.5478,0,-30.2632	0/0:60:60,0:60:2140:0:0:0,-18.0618,-192.868	0/0:44:44,0:44:1563:0:0:0,-13.2453,-140.961	0/0:149:149,0:149:5311:0:0:0,-44.8535,-478.127	0/0:94:94,0:94:3331:0:0:0,-28.2968,-300.007	0/1:102:54,48:54:1897:48:1716:-124.021,0,-140.298	0/0:88:88,0:88:3151:0:0:0,-26.4906,-283.814	0/1:9:2,7:2:72:7:243:-19.4982,0,-4.12745	0/0:53:53,0:53:1886:0:0:0,-15.9546,-170.017	0/1:52:12,40:12:424:40:1413:-111.812,0,-22.8429	0/0:198:198,0:198:7076:0:0:0,-59.6039,-636.899	0/0:78:77,1:77:2739:1:36:0,-19.8847,-243.155	0/1:48:21,27:21:743:27:960:-72.2668,0,-52.7439	0/0:36:35,0:35:1243:0:0:0,-10.536,-111.814	0/1:95:38,57:38:1347:57:2035:-154.824,0,-92.9316	0/1:30:14,16:14:496:16:567:-42.3298,0,-35.9434	0/0:45:45,0:45:1588:0:0:0,-13.5463,-143.208	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/1:162:71,91:71:2516:91:3256:-244.494,0,-177.926	0/1:34:11,23:11:381:23:807:-62.7141,0,-24.3856	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:36:34,2:34:1211:2:72:0,-4.00036,-102.459
chr05	21123429	.	A	G	98805.6	PASS	AB=0.452133;ABP=62.2571;AC=142;AF=0.755319;AN=188;AO=4684;CIGAR=1X;DP=6324;DPB=6324;DPRA=0;EPP=10139.5;EPPR=3518.76;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9951;MQMR=59.9976;NS=94;NUMALT=1;ODDS=0.416263;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=167024;QR=58754;RO=1639;RPL=6;RPP=10122.1;RPPR=3518.76;RPR=4678;RUN=1;SAF=2;SAP=10156.8;SAR=4682;SRF=0;SRP=3562.05;SRR=1639;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:48:28,20:28:1000:20:701:-48.9623,0,-75.8659	1/1:60:0,60:0:0:60:2152:-193.947,-18.0618,0	0/1:62:27,35:27:972:35:1247:-93.8702,0,-69.134	1/1:134:0,134:0:0:134:4771:-429.546,-40.338,0	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	1/1:37:0,37:0:0:37:1310:-118.199,-11.1381,0	0/1:68:50,18:50:1784:18:648:-38.1818,0,-140.373	1/1:154:0,154:0:0:154:5495:-494.676,-46.3586,0	0/1:53:25,28:25:896:28:1004:-74.7213,0,-65.0058	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:47:0,47:0:0:47:1679:-151.394,-14.1484,0	0/1:54:37,17:37:1332:17:603:-38.3439,0,-103.927	0/1:59:29,30:29:1044:30:1063:-78.2201,0,-76.514	0/1:80:44,36:44:1580:36:1296:-92.8615,0,-118.409	1/1:46:0,46:0:0:46:1656:-149.328,-13.8474,0	1/1:36:0,36:0:0:36:1288:-116.224,-10.8371,0	1/1:61:0,61:0:0:61:2187:-197.095,-18.3628,0	1/1:42:0,42:0:0:42:1497:-135.023,-12.6433,0	1/1:40:0,40:0:0:40:1406:-126.833,-12.0412,0	0/1:98:50,48:50:1777:48:1709:-124.593,0,-130.71	1/1:71:0,71:0:0:71:2535:-228.401,-21.3731,0	0/1:50:36,14:36:1296:14:500:-30.2847,0,-101.892	0/1:68:35,33:35:1251:33:1184:-86.3983,0,-92.4242	1/1:128:0,128:0:0:128:4592:-413.444,-38.5318,0	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	1/1:242:0,241:0:0:241:8594:-773.245,-72.5482,0	0/1:163:70,93:70:2497:93:3315:-249.501,0,-175.913	0/1:30:16,14:16:576:14:500:-36.3053,0,-43.1441	0/1:114:64,50:64:2304:50:1769:-125.174,0,-173.303	0/1:108:49,59:49:1752:59:2104:-157.116,0,-125.453	1/1:86:0,86:0:0:86:3061:-275.718,-25.8886,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:12:0,12:0:0:12:408:-37.0441,-3.61236,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	1/1:115:0,115:0:0:115:4072:-366.668,-34.6185,0	1/1:147:0,147:0:0:147:5268:-474.256,-44.2514,0	1/1:77:0,77:0:0:77:2749:-247.651,-23.1793,0	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	0/1:89:44,45:44:1576:45:1599:-117.408,0,-115.34	1/1:34:0,34:0:0:34:1211:-109.296,-10.235,0	0/1:118:62,56:62:2228:56:2004:-145.112,0,-165.262	0/1:40:22,18:22:788:18:615:-43.6266,0,-59.2036	1/1:34:0,34:0:0:34:1187:-107.134,-10.235,0	1/1:70:0,70:0:0:70:2493:-224.621,-21.0721,0	1/1:50:0,50:0:0:50:1774:-159.942,-15.0515,0	0/1:166:90,76:90:3224:76:2707:-193.903,0,-240.411	1/1:70:0,70:0:0:70:2495:-224.802,-21.0721,0	1/1:65:0,65:0:0:65:2313:-208.43,-19.567,0	1/1:48:0,48:0:0:48:1728:-155.805,-14.4494,0	0/1:7:4,3:4:144:3:93:-6.56952,0,-11.2064	1/1:72:0,72:0:0:72:2550:-229.749,-21.6742,0	1/1:64:0,64:0:0:64:2292:-206.541,-19.2659,0	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/1:77:37,40:37:1324:40:1424:-105.278,0,-96.2828	1/1:70:0,70:0:0:70:2503:-225.522,-21.0721,0	0/1:10:1,9:1:36:9:315:-25.6769,0,-0.587975	0/1:14:4,10:4:140:10:360:-28.5299,0,-8.73016	1/1:84:1,83:1:36:83:2961:-263.124,-21.6882,0	0/1:116:67,49:67:2408:49:1752:-123.045,0,-182.057	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:76:68,8:68:2436:8:288:-3.38913,0,-196.617	0/1:166:90,76:90:3221:76:2701:-193.362,0,-240.139	0/1:83:39,44:39:1404:44:1584:-117.866,0,-101.674	0/1:40:22,18:22:792:18:639:-45.797,0,-59.5645	1/1:51:2,49:2:72:49:1755:-151.397,-8.51581,0	0/1:79:50,29:50:1781:29:1040:-70.133,0,-136.789	0/1:35:23,12:23:828:12:432:-28.6851,0,-64.3081	0/1:111:57,54:57:2052:54:1924:-140.023,0,-151.537	0/1:84:45,39:45:1620:39:1382:-99.3908,0,-120.803	0/1:20:8,12:8:288:12:428:-32.8382,0,-20.2468	1/1:62:0,62:0:0:62:2193:-197.635,-18.6639,0	1/1:43:0,43:0:0:43:1539:-138.802,-12.9443,0	1/1:152:2,150:2:72:150:5328:-472.817,-38.9198,0	1/1:93:0,93:0:0:93:3344:-301.176,-27.9958,0	0/1:109:54,55:54:1944:55:1959:-143.765,0,-142.424	1/1:87:0,87:0:0:87:3128:-281.745,-26.1896,0	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	1/1:54:0,54:0:0:54:1899:-171.184,-16.2556,0	0/1:54:42,12:42:1508:12:432:-22.9656,0,-119.759	1/1:198:0,198:0:0:198:7104:-639.417,-59.6039,0	1/1:80:1,79:1:36:79:2809:-249.45,-20.4867,0	0/1:48:28,20:28:1008:20:716:-50.3183,0,-76.5869	1/1:36:0,36:0:0:36:1275:-115.052,-10.8371,0	0/1:99:61,38:61:2164:38:1364:-93.2587,0,-165.223	0/1:31:17,14:17:612:14:491:-35.1884,0,-46.0815	1/1:44:0,44:0:0:44:1567:-141.321,-13.2453,0	1/1:51:0,51:0:0:51:1823:-164.35,-15.3525,0	1/1:49:0,49:0:0:49:1745:-157.332,-14.7505,0	0/1:162:91,71:91:3267:71:2500:-176.482,0,-245.482	0/1:35:23,12:23:820:12:432:-28.6851,0,-63.5865	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:37:2,35:2:72:35:1256:-106.509,-4.30139,0
chr05	22761151	.	T	C	354880	PASS	AB=0.506216;ABP=5.79089;AC=144;AF=0.765957;AN=188;AO=13303;CIGAR=1X;DP=17424;DPB=17424;DPRA=0;EPP=28890.1;EPPR=8945.13;GTI=0;LEN=1;MEANALT=1.03191;MQM=51.8797;MQMR=58.5481;NS=94;NUMALT=1;ODDS=2.53881;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=472914;QR=147463;RO=4118;RPL=6146;RPP=169.853;RPPR=393.011;RPR=7157;RUN=1;SAF=6146;SAP=169.853;SAR=7157;SRF=1629;SRP=393.011;SRR=2489;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:101:55,46:55:1960:46:1648:-116.388,0,-145.616	1/1:226:0,225:0:0:225:8011:-712.56,-67.7318,0	0/1:359:187,172:187:6684:172:6107:-428.597,0,-491.762	1/1:595:0,595:0:0:595:21168:-1887.9,-179.113,0	1/1:98:0,98:0:0:98:3509:-314.051,-29.5009,0	1/1:51:0,51:0:0:51:1772:-157.476,-15.3525,0	0/1:150:73,77:73:2593:77:2748:-200.549,0,-188.433	1/1:265:1,264:1:32:264:9371:-826.689,-76.5743,0	0/1:198:117,81:117:4192:81:2840:-192.747,0,-317.596	1/1:291:0,291:0:0:291:10369:-928.336,-87.5997,0	1/1:84:0,84:0:0:84:2983:-266.717,-25.2865,0	0/1:180:78,101:78:2796:101:3563:-262.847,0,-196.854	0/1:165:74,91:74:2664:91:3207:-234.193,0,-189.948	0/1:126:63,63:63:2259:63:2237:-161.285,0,-165.444	1/1:131:0,131:0:0:131:4678:-418.88,-39.4349,0	1/1:102:0,102:0:0:102:3590:-320.454,-30.7051,0	1/1:82:0,82:0:0:82:2875:-255.887,-24.6845,0	1/1:94:0,94:0:0:94:3334:-297.38,-28.2968,0	1/1:58:0,58:0:0:58:2068:-183.272,-17.4597,0	0/1:298:168,130:168:6028:130:4597:-320.724,0,-451.665	0/1:340:146,194:146:5227:194:6873:-510.951,0,-367.955	0/1:121:87,34:87:3128:34:1207:-72.0067,0,-245.221	0/1:246:135,111:135:4840:111:3966:-279.667,0,-361.582	1/1:236:13,223:13:464:223:7944:-668.649,-28.9552,0	1/1:132:1,131:1:36:131:4623:-409.49,-36.1381,0	1/1:505:1,504:1:36:504:17847:-1591.31,-148.422,0	0/1:384:120,264:120:4273:264:9400:-721.153,0,-268.729	0/1:84:45,39:45:1616:39:1395:-99.8632,0,-120.128	0/1:289:60,229:60:2151:229:8170:-644.795,0,-106.824	0/1:196:104,92:104:3715:92:3245:-229.299,0,-275.507	1/1:146:0,146:0:0:146:5232:-468.467,-43.9504,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7396	1/1:14:0,14:0:0:14:489:-43.9311,-4.21442,0	0/1:7:1,6:1:36:6:216:-17.4,0,-1.49106	1/1:33:1,32:1:36:32:1152:-97.7764,-6.33743,0	1/1:27:0,27:0:0:27:951:-84.3207,-8.12781,0	1/1:360:0,360:0:0:360:12748:-1144.04,-108.371,0	1/1:140:0,140:0:0:140:4993:-445.185,-42.1442,0	1/1:90:0,90:0:0:90:3212:-283.324,-27.0927,0	1/1:7:0,7:0:0:7:252:-22.6992,-2.10721,0	0/1:368:211,157:211:7572:157:5580:-384.899,0,-570.17	1/1:51:0,51:0:0:51:1806:-161.411,-15.3525,0	0/1:361:195,166:195:6999:166:5932:-417.599,0,-520.747	0/1:176:77,99:77:2764:99:3517:-262.329,0,-195.992	1/1:115:0,115:0:0:115:4069:-363.887,-34.6185,0	1/1:194:4,190:4:144:190:6773:-594.252,-45.0862,0	0/1:185:86,99:86:3096:99:3489:-253.794,0,-222.892	0/1:364:206,158:206:7347:158:5632:-393.812,0,-550.383	1/1:238:0,238:0:0:238:8476:-757.698,-71.6451,0	1/1:267:0,267:0:0:267:9491:-848.046,-80.375,0	1/1:337:0,337:0:0:337:11963:-1073.92,-101.447,0	0/1:25:14,11:14:504:11:392:-27.8086,0,-38.1723	0/1:406:227,179:227:8107:179:6370:-436.754,0,-605.212	1/1:68:0,68:0:0:68:2414:-216.064,-20.47,0	0/1:12:5,7:5:165:7:248:-18.9506,0,-11.5587	0/1:294:135,159:135:4856:159:5674:-416.689,0,-347.839	1/1:92:0,92:0:0:92:3280:-292.277,-27.6948,0	0/1:10:7,3:7:252:3:108:-6.99909,0,-20.0187	0/1:27:18,9:18:648:9:324:-21.2833,0,-50.5241	1/1:212:0,212:0:0:212:7559:-672.363,-63.8184,0	0/1:162:78,84:78:2804:84:2978:-217.834,0,-203.613	0/1:11:9,2:9:324:2:72:-3.4955,0,-26.1807	0/1:305:71,234:71:2556:234:8313:-652.5,0,-138.402	0/1:362:194,168:194:6957:168:5974:-424.867,0,-516.868	0/1:180:73,107:73:2624:107:3791:-283.92,0,-182.013	1/1:75:1,74:1:36:74:2641:-232.373,-18.979,0	1/1:357:4,353:4:144:353:12614:-1114.01,-94.1541,0	0/1:298:182,116:182:6532:116:4130:-278.914,0,-497.545	0/1:64:34,30:34:1220:30:1048:-74.0626,0,-90.7855	0/1:139:64,75:64:2283:75:2667:-194.703,0,-163.708	0/1:146:68,78:68:2436:78:2783:-206.125,0,-175.469	1/1:24:0,24:0:0:24:860:-76.8808,-7.22472,0	1/1:189:0,189:0:0:189:6695:-592.931,-56.8947,0	1/1:203:0,202:0:0:202:7227:-642.716,-60.8081,0	1/1:283:0,283:0:0:283:10113:-898.14,-85.1915,0	1/1:393:0,393:0:0:393:14039:-1252.63,-118.305,0	0/1:165:98,67:98:3528:67:2364:-159.262,0,-267.737	1/1:313:0,313:0:0:313:11125:-985.328,-94.2224,0	1/1:10:0,10:0:0:10:360:-32.1956,-3.0103,0	1/1:303:0,303:0:0:303:10833:-963.239,-91.2121,0	0/1:211:104,107:104:3699:107:3807:-273.602,0,-269.462	1/1:431:0,431:0:0:431:15357:-1371.89,-129.744,0	1/1:151:1,150:1:36:150:5337:-474.755,-41.8573,0	0/1:128:65,63:65:2324:63:2227:-161.478,0,-170.854	1/1:158:1,157:1:36:157:5521:-492.048,-43.9645,0	0/1:298:147,151:147:5237:151:5373:-391.473,0,-380.275	0/1:56:32,24:32:1139:24:852:-59.5784,0,-85.8779	1/1:135:0,135:0:0:135:4802:-427.845,-40.6391,0	1/1:128:0,128:0:0:128:4545:-404.382,-38.5318,0	1/1:65:0,65:0:0:65:2290:-202.556,-19.567,0	0/1:147:81,66:81:2884:66:2328:-162.01,0,-215.346	0/1:135:91,44:91:3264:44:1554:-98.4854,0,-253.284	1/1:359:0,359:0:0:359:12692:-1132.74,-108.07,0	1/1:221:0,221:0:0:221:7879:-705.72,-66.5276,0
chr05	23524090	.	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chr05	24349034	.	GCTC	GC	180680	PASS	AB=0.417671;ABP=432.785;AC=140;AF=0.744681;AN=188;AO=9471;CIGAR=1M2D1M;DP=13751;DPB=9013.5;DPRA=36.9543;EPP=20569;EPPR=9238.28;GTI=5;LEN=2;MEANALT=1.22581;MQM=42.8141;MQMR=59.9948;NS=94;NUMALT=1;ODDS=0.964294;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=329056;QR=148352;RO=4257;RPL=1;RPP=20560.3;RPPR=9160.31;RPR=9470;RUN=1;SAF=1;SAP=20560.3;SAR=9470;SRF=9;SRP=9168.96;SRR=4248;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:69:34,35:34:1193:35:1184:-82.7868,0,-86.9029	1/1:185:0,185:0:0:185:6471:-566.584,-55.6906,0	0/1:235:140,95:140:4874:95:3300:-218.033,0,-368.083	1/1:319:0,319:0:0:319:11180:-982.974,-96.0286,0	1/1:138:0,138:0:0:138:4808:-424.862,-41.5421,0	1/1:40:0,40:0:0:40:1382:-121.042,-12.0412,0	0/1:209:114,95:114:3949:95:3310:-229.149,0,-292.695	1/1:260:0,260:0:0:260:9003:-788.236,-78.2678,0	0/1:138:80,57:80:2817:57:1987:-132.598,0,-212.168	1/1:147:0,147:0:0:147:5090:-448.338,-44.2514,0	1/1:62:0,62:0:0:62:2148:-189.086,-18.6639,0	0/1:77:33,43:33:1174:43:1459:-105.192,0,-82.7301	0/1:76:31,45:31:1080:45:1569:-115.047,0,-74.6295	0/1:103:55,48:55:1920:48:1660:-116.393,0,-142.069	0/1:76:43,33:43:1513:33:1156:-79.4891,0,-113.584	1/1:60:0,60:0:0:60:2053:-180.86,-18.0618,0	1/1:55:0,55:0:0:55:1879:-165.105,-16.5567,0	1/1:67:0,67:0:0:67:2349:-206.016,-20.169,0	1/1:61:0,61:0:0:61:2105:-183.792,-18.3628,0	0/1:377:228,149:228:7982:149:5187:-342.205,0,-604.934	0/1:200:119,80:119:4161:80:2778:-185.26,0,-314.443	0/1:279:206,72:206:7142:72:2507:-138.274,0,-558.812	0/1:189:126,62:126:4372:62:2174:-134.451,0,-336.798	1/1:151:12,138:12:423:138:4773:-381.428,-7.1071,0	1/1:106:1,104:1:36:104:3601:-314.547,-28.3547,0	1/1:366:0,366:0:0:366:12726:-1122.59,-110.177,0	1/1:273:0,273:0:0:273:9574:-844.641,-82.1812,0	0/1:42:27,15:27:940:15:474:-29.6473,0,-72.2688	0/1:525:286,237:286:9928:237:8212:-569.246,0,-735.694	0/1:216:106,110:106:3724:110:3830:-273.081,0,-270.343	1/1:133:0,133:0:0:133:4642:-408.035,-40.037,0	0/1:17:7,10:7:245:10:347:-25.5243,0,-17.273	1/1:28:0,28:0:0:28:963:-85.6112,-8.42884,0	1/1:8:0,8:0:0:8:273:-23.667,-2.40824,0	1/1:12:0,12:0:0:12:419:-37.1255,-3.61236,0	1/1:14:0,14:0:0:14:487:-42.555,-4.21442,0	1/1:241:2,239:2:58:239:8299:-725.644,-67.0389,0	1/1:231:0,231:0:0:231:8019:-705.829,-69.5379,0	1/1:96:0,96:0:0:96:3311:-289.682,-28.8989,0	0/0:4:4,0:4:138:0:0:0,-1.20412,-12.7598	0/1:279:189,90:189:6582:90:3110:-190.962,0,-508.494	1/1:60:0,60:0:0:60:2086:-183.983,-18.0618,0	0/1:327:203,124:203:7063:124:4332:-284.923,0,-537.311	0/1:78:31,47:31:1085:47:1633:-120.839,0,-74.4788	1/1:61:0,61:0:0:61:1991:-176.316,-18.3628,0	1/1:189:0,189:0:0:189:6569:-577.866,-56.8947,0	0/1:214:108,104:108:3772:104:3610:-252.492,0,-275.581	0/1:289:184,104:184:6431:104:3684:-237.025,0,-491.835	1/1:143:1,142:1:36:142:4916:-429.859,-39.449,0	1/1:222:0,222:0:0:222:7718:-680.354,-66.8287,0	1/1:248:0,248:0:0:248:8652:-763.915,-74.6554,0	0/1:28:20,8:20:697:8:288:-17.2745,0,-54.6233	0/1:281:135,143:135:4714:143:4952:-348.804,0,-340.39	1/1:25:1,24:1:36:24:855:-71.9364,-3.92748,0	0/1:37:25,12:25:854:12:410:-25.1742,0,-66.0337	0/1:222:124,97:124:4295:97:3375:-231.432,0,-319.85	1/1:81:0,81:0:0:81:2812:-247.252,-24.3834,0	0/1:30:20,10:20:677:10:343:-21.7191,0,-52.2138	1/1:23:2,21:2:61:21:735:-59.5426,-1.13046,0	1/1:109:0,109:0:0:109:3796:-335.777,-32.8123,0	0/1:140:68,72:68:2394:72:2530:-180.84,0,-173.574	0/1:23:11,12:11:372:12:420:-30.4902,0,-26.8814	0/1:376:213,161:213:7441:161:5590:-379.885,0,-556.805	0/1:317:195,122:195:6731:122:4215:-275.884,0,-510.46	0/1:143:96,47:96:3318:47:1641:-101.968,0,-255.796	0/1:154:78,74:78:2718:74:2587:-182.091,0,-198.748	1/1:241:1,240:1:36:240:8376:-733.872,-68.95,0	0/1:240:181,57:181:6333:57:2003:-104.057,0,-498.069	0/1:30:16,14:16:567:14:487:-34.4373,0,-42.3304	0/1:96:52,44:52:1820:44:1509:-103.903,0,-135.181	0/1:85:56,29:56:1938:29:1002:-63.547,0,-149.107	0/1:44:34,10:34:1209:10:342:-17.2821,0,-95.8711	1/1:171:0,171:0:0:171:5825:-510.642,-51.4761,0	1/1:88:0,88:0:0:88:3033:-264.467,-26.4906,0	1/1:169:1,168:1:36:168:5835:-512.451,-47.2758,0	1/1:224:0,224:0:0:224:7875:-691.938,-67.4307,0	0/1:187:105,82:105:3609:82:2818:-191.491,0,-268.728	1/1:161:1,160:1:36:160:5530:-479.817,-44.8676,0	0/1:21:13,8:13:464:8:284:-18.5756,0,-35.7697	1/1:181:1,180:1:35:180:6245:-548.562,-50.9878,0	0/1:218:114,104:114:3929:104:3649:-254.929,0,-288.187	1/1:353:0,353:0:0:353:12320:-1084.17,-106.264,0	0/1:101:52,49:52:1811:49:1703:-118.975,0,-132.867	0/1:83:44,39:44:1562:39:1375:-96.6109,0,-115.886	1/1:104:0,104:0:0:104:3598:-316.287,-31.3071,0	0/1:179:93,86:93:3268:86:2973:-208.73,0,-240.458	0/1:59:31,28:31:1103:28:986:-68.9131,0,-81.8205	1/1:85:0,85:0:0:85:2898:-254.208,-25.5876,0	1/1:73:0,73:0:0:73:2506:-219.269,-21.9752,0	1/1:49:0,49:0:0:49:1712:-151.934,-14.7505,0	0/1:87:35,51:35:1244:51:1762:-127.959,0,-86.0168	0/1:104:69,35:69:2406:35:1235:-76.9571,0,-185.49	1/1:223:0,223:0:0:223:7782:-685.783,-67.1297,0	1/1:111:0,111:0:0:111:3854:-340.093,-33.4143,0
chr05	24349073	.	GCC	ACT	206166	PASS	AB=0.435861;ABP=276.829;AC=141;AF=0.75;AN=188;AO=10442;CIGAR=1X1M1X;DP=14808;DPB=14808.3;DPRA=0;EPP=22677.5;EPPR=9401.14;GTI=3;LEN=3;MEANALT=1.32979;MQM=42.8966;MQMR=59.9958;NS=94;NUMALT=1;ODDS=0.0912193;PAIRED=0;PAIREDR=0;PAO=1;PQA=32;PQR=0;PRO=0;QA=369712;QR=152887;RO=4332;RPL=10442;RPP=22677.5;RPPR=9401.14;RPR=0;RUN=1;SAF=0;SAP=22677.5;SAR=10442;SRF=0;SRP=9409.83;SRR=4332;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:74:37,37:37:1285:37:1307:-91.8781,0,-93.6711	1/1:207:0,205:0:0:205:7295:-637.344,-61.7112,0	0/1:246:139,105:139:4888:105:3724:-251.89,0,-366.265	1/1:354:0,353:0:0:353:12495:-1098.24,-106.264,0	1/1:153:0,153:0:0:153:5437:-480.124,-46.0576,0	1/1:45:0,45:0:0:45:1559:-136.59,-13.5464,0	0/1:217:117,100:117:4092:100:3562:-248.508,0,-303.148	1/1:280:0,280:0:0:280:9869:-862.787,-84.2884,0	0/1:143:82,61:82:2927:61:2169:-146.82,0,-220.617	1/1:166:0,166:0:0:166:5891:-518.013,-49.971,0	1/1:68:0,68:0:0:68:2420:-212.023,-20.47,0	0/1:86:34,52:34:1217:52:1826:-133.606,0,-83.9483	0/1:82:33,49:33:1153:49:1760:-129.784,0,-79.3883	0/1:112:56,56:56:1956:56:1990:-142.753,0,-142.597	0/1:80:43,37:43:1530:37:1320:-92.5585,0,-113.91	1/1:63:0,63:0:0:63:2231:-195.832,-18.9649,0	1/1:63:0,63:0:0:63:2208:-193.365,-18.9649,0	1/1:71:0,71:0:0:71:2528:-221.328,-21.3731,0	1/1:71:0,70:0:0:70:2500:-217.243,-21.0721,0	0/1:395:228,167:228:8044:167:5858:-395.832,0,-605.082	0/1:204:119,84:119:4182:84:2998:-202.866,0,-315.096	0/1:286:210,75:210:7400:75:2686:-151.42,0,-579.904	0/1:203:128,75:128:4513:75:2638:-170.626,0,-345.231	1/1:161:12,148:12:428:148:5242:-422.496,-9.61516,0	1/1:114:1,113:1:36:113:4015:-350.928,-30.7191,0	1/1:410:0,407:0:0:407:14323:-1262.47,-122.519,0	1/1:298:0,298:0:0:298:10559:-931.398,-89.7069,0	0/1:47:27,20:27:954:20:688:-46.6697,0,-72.0219	0/1:543:291,251:291:10297:251:8937:-625.658,0,-763.226	0/1:227:107,119:107:3794:119:4209:-302.59,0,-273.267	1/1:149:0,149:0:0:149:5254:-460.371,-44.8535,0	0/1:17:7,10:7:252:10:360:-26.623,0,-17.9114	1/1:29:0,29:0:0:29:1033:-91.6214,-8.72987,0	1/1:8:0,8:0:0:8:287:-24.93,-2.40824,0	1/1:13:0,13:0:0:13:468:-41.3318,-3.91339,0	1/1:15:0,15:0:0:15:540:-47.0491,-4.51545,0	1/1:263:2,259:2:70:259:9229:-804.061,-72.2763,0	1/1:255:0,254:0:0:254:8974:-789.351,-76.4616,0	1/1:107:0,107:0:0:107:3802:-331.935,-32.2102,0	0/1:5:4,1:4:144:1:34:-1.85347,0,-11.8085	0/1:287:191,96:191:6694:96:3413:-214.733,0,-516.149	1/1:65:0,65:0:0:65:2330:-205.186,-19.567,0	0/1:343:210,130:210:7426:130:4623:-306.055,0,-565.732	0/1:82:31,51:31:1094:51:1827:-135.72,0,-74.0847	1/1:77:0,77:0:0:77:2654:-234.548,-23.1793,0	1/1:210:0,210:0:0:210:7445:-654.371,-63.2163,0	0/1:226:111,115:111:3914:115:4085:-289.562,0,-284.422	0/1:302:181,121:181:6401:121:4252:-283.392,0,-485.272	1/1:162:1,161:1:36:161:5647:-493.216,-45.1686,0	1/1:242:0,241:0:0:241:8557:-752.719,-72.5482,0	1/1:275:0,273:0:0:273:9621:-848.761,-82.1812,0	0/1:29:20,9:20:716:9:324:-20.1424,0,-56.0381	0/1:292:139,152:139:4922:152:5409:-384.414,0,-355.264	1/1:32:1,31:1:36:31:1092:-92.9532,-6.03469,0	0/1:39:26,13:26:894:13:459:-28.779,0,-69.0292	0/1:239:130,109:130:4597:109:3817:-265.287,0,-341.943	1/1:90:0,90:0:0:90:3201:-281.387,-27.0927,0	0/1:34:20,14:20:696:14:501:-34.6221,0,-52.7262	1/1:26:2,24:2:62:24:844:-68.9339,-1.93858,0	1/1:118:0,118:0:0:118:4170:-368.425,-35.5215,0	0/1:144:68,76:68:2437:76:2721:-196.114,0,-176.237	0/1:24:11,13:11:378:13:449:-32.7449,0,-27.1238	0/1:395:219,174:219:7738:174:6151:-424.389,0,-577.938	0/1:344:200,144:200:7051:144:5065:-342.224,0,-531.103	0/1:154:97,57:97:3430:57:2005:-130.192,0,-262.557	0/1:160:83,77:83:2921:77:2738:-193.252,0,-214.96	1/1:261:1,259:1:36:259:9227:-808.271,-74.9894,0	0/1:247:183,63:183:6472:63:2224:-121.008,0,-508.157	0/1:31:16,15:16:569:15:538:-38.4964,0,-42.2106	0/1:101:54,46:54:1929:46:1629:-112.503,0,-143.424	0/1:86:57,29:57:2006:29:1037:-66.1658,0,-154.922	0/1:47:37,10:37:1317:10:353:-17.3401,0,-104.683	1/1:192:0,192:0:0:192:6766:-590.437,-57.7978,0	1/1:96:0,96:0:0:96:3397:-295.613,-28.8989,0	1/1:193:1,191:1:36:191:6710:-589.396,-54.5121,0	1/1:252:0,252:0:0:252:8901:-782.018,-75.8596,0	0/1:199:107,92:107:3778:92:3261:-225.693,0,-280.316	1/1:175:1,173:1:36:173:6111:-529.236,-49.136,0	0/1:22:11,11:11:396:11:390:-26.4117,0,-29.3601	1/1:195:1,194:1:27:194:6876:-603.295,-56.0011,0	0/1:233:116,117:116:4087:117:4139:-293.017,0,-297.88	1/1:395:0,395:0:0:395:14047:-1235.34,-118.907,0	0/1:106:53,53:53:1863:53:1862:-131.456,0,-136.039	0/1:86:44,42:44:1584:42:1499:-106.077,0,-116.963	1/1:120:0,119:0:0:119:4191:-367.992,-35.8226,0	0/1:186:94,92:94:3316:92:3261:-231.624,0,-242.665	0/1:62:33,29:33:1167:29:1026:-71.4975,0,-86.672	1/1:92:0,92:0:0:92:3241:-283.105,-27.6948,0	1/1:83:0,83:0:0:83:2929:-254.838,-24.9855,0	1/1:55:0,55:0:0:55:1955:-172.729,-16.5567,0	0/1:94:38,56:38:1340:56:2002:-146.18,0,-92.6022	0/1:102:67,35:67:2323:35:1245:-78.2983,0,-178.622	1/1:251:0,249:0:0:249:8843:-777.626,-74.9565,0	1/1:125:0,125:0:0:125:4427:-390.481,-37.6288,0
chr05	24368044	.	A	G	349255	PASS	AB=0.500919;ABP=3.25383;AC=94;AF=0.5;AN=188;AO=16620;CIGAR=1X;DP=33179;DPB=33179;DPRA=0;EPP=36075.5;EPPR=35906.1;GTI=0;LEN=1;MEANALT=1.14894;MQM=49.1916;MQMR=37.7595;NS=94;NUMALT=1;ODDS=120.693;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=584650;QR=589654;RO=16542;RPL=6935;RPP=991.083;RPPR=35025.9;RPR=9685;RUN=1;SAF=6937;SAP=988.21;SAR=9683;SRF=104;SRP=35025.9;SRR=16438;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:133:68,65:68:2427:65:2283:-152.918,0,-160.993	0/1:566:244,322:244:8628:322:11318:-821.753,0,-530.376	0/1:457:293,164:293:10431:164:5807:-353.893,0,-731.043	0/1:957:349,608:349:12402:608:21393:-1541.14,0,-758.449	0/1:255:116,138:116:4160:138:4881:-347.287,0,-268.324	0/1:219:86,133:86:3050:133:4687:-340.575,0,-179.991	0/1:445:305,140:305:10891:140:4920:-289.028,0,-800.637	0/1:344:121,223:121:4299:223:7763:-557.845,0,-245.361	0/1:322:191,131:191:6840:131:4595:-297.796,0,-470.991	0/1:463:166,297:166:5879:297:10479:-762.856,0,-355.295	0/1:160:47,113:47:1654:113:3949:-280.688,0,-92.3392	0/1:238:129,109:129:4619:109:3842:-249.041,0,-312.251	0/1:232:127,105:127:4542:105:3681:-244.977,0,-304.019	0/1:238:138,100:138:4901:100:3534:-230.46,0,-339.036	0/1:220:134,86:134:4783:86:3064:-190.06,0,-342.759	0/1:214:60,154:60:2117:154:5402:-391.215,0,-108.471	0/1:246:102,144:102:3593:144:5070:-367.371,0,-216.615	0/1:224:97,126:97:3452:126:4466:-319.634,0,-210.841	0/1:102:39,63:39:1385:63:2224:-155.874,0,-81.3987	0/1:706:466,240:466:16622:240:8483:-513.383,0,-1206.86	0/1:511:320,191:320:11418:191:6701:-424.121,0,-805.255	0/1:341:258,83:258:9206:83:2918:-151.558,0,-678.685	0/1:354:240,114:240:8590:114:3998:-231.223,0,-626.566	0/1:533:254,279:254:9040:279:9807:-707.33,0,-595.891	0/1:282:76,205:76:2696:205:7213:-534.005,0,-136.74	0/1:1126:497,626:497:17714:626:22009:-1572.87,0,-1116.52	0/1:844:277,566:277:9871:566:19835:-1436.24,0,-565.447	0/1:136:88,48:88:3142:48:1670:-100.727,0,-222.067	0/1:991:633,357:633:22677:357:12650:-791.538,0,-1583.54	0/1:533:369,164:369:13129:164:5797:-338.529,0,-951.053	0/1:436:130,306:130:4651:306:10799:-780.633,0,-259.326	0/1:11:8,3:8:288:3:108:-6.4352,0,-21.5964	0/1:28:5,23:5:180:23:811:-60.901,0,-7.41164	0/1:17:6,11:6:216:11:396:-29.5848,0,-12.5464	0/1:21:8,13:8:288:13:449:-32.3387,0,-17.9159	0/1:24:4,20:4:144:20:712:-52.7214,0,-4.16829	0/1:687:225,462:225:8022:462:16282:-1186.24,0,-446.973	0/1:588:233,353:233:8342:353:12294:-892.025,0,-515.874	0/1:179:60,119:60:2143:119:4172:-305.539,0,-119.707	0/1:4:2,2:2:72:2:68:-4.91908,0,-5.35941	0/1:620:409,211:409:14597:211:7403:-456.375,0,-1033.55	0/1:108:40,68:40:1423:68:2388:-166.153,0,-83.8451	0/1:623:411,212:411:14626:212:7411:-446.176,0,-1051.83	0/1:225:145,80:145:5132:80:2839:-174.297,0,-371.961	0/1:245:84,161:84:2982:161:5564:-406.592,0,-178.488	0/1:409:158,251:158:5601:251:8864:-639.384,0,-337.055	0/1:440:271,168:271:9687:168:5844:-372.319,0,-682.114	0/1:660:405,255:405:14480:255:8965:-578.926,0,-1034.92	0/1:503:195,307:195:6972:307:10803:-776.163,0,-435.644	0/1:498:215,283:215:7677:283:10002:-709.959,0,-497.428	0/1:584:222,362:222:7895:362:12799:-933.255,0,-472.567	0/1:20:9,11:9:320:11:392:-26.5334,0,-20.8641	0/1:416:257,159:257:9149:159:5652:-362.929,0,-637.915	0/1:175:40,135:40:1436:135:4808:-346.285,0,-66.7882	0/1:27:15,12:15:540:12:432:-27.895,0,-36.5892	0/1:447:260,187:260:9271:187:6525:-419.324,0,-646.795	0/1:241:93,148:93:3313:148:5178:-364.365,0,-206.932	0/1:16:13,3:13:464:3:104:-4.39374,0,-35.4804	0/1:52:34,18:34:1220:18:635:-41.3455,0,-86.5008	0/1:326:114,212:114:4070:212:7435:-534.206,0,-239.408	0/1:294:165,129:165:5894:129:4572:-296.024,0,-415.224	0/1:22:16,6:16:576:6:216:-12.0386,0,-43.0431	0/1:733:501,232:501:17931:232:8133:-486.286,0,-1274.64	0/1:711:485,226:485:17258:226:7984:-475.001,0,-1256.89	0/1:321:213,108:213:7589:108:3801:-233.152,0,-545.071	0/1:350:226,124:226:8083:124:4342:-267.664,0,-585.366	0/1:623:225,398:225:8008:398:14003:-1012.52,0,-488.074	0/1:304:230,74:230:8242:74:2596:-121.338,0,-614.386	0/1:88:34,54:34:1211:54:1910:-132.747,0,-75.7929	0/1:285:185,100:185:6580:100:3545:-219.426,0,-459.417	0/1:260:181,78:181:6462:78:2753:-156.518,0,-460.535	0/1:68:36,32:36:1277:32:1144:-73.3193,0,-89.5252	0/1:324:107,217:107:3811:217:7623:-549.971,0,-209.433	0/1:210:73,137:73:2607:137:4812:-351.36,0,-151.254	0/1:620:188,431:188:6679:431:15193:-1106.68,0,-364.996	0/1:818:365,453:365:13020:453:15957:-1130.58,0,-852.277	0/1:308:174,134:174:6198:134:4705:-316.324,0,-425.299	0/1:510:231,278:231:8244:278:9785:-699.273,0,-513.249	0/1:22:17,5:17:612:5:172:-8.38582,0,-44.5671	0/1:711:382,329:382:13652:329:11507:-794.656,0,-913.142	0/1:335:222,113:222:7896:113:3956:-238.942,0,-552.959	0/1:850:326,524:326:11541:524:18339:-1332.49,0,-713.811	0/1:270:160,110:160:5728:110:3875:-255.154,0,-408.643	0/1:223:124,99:124:4393:99:3503:-228.972,0,-307.588	0/1:307:131,175:131:4672:175:6102:-436.819,0,-302.405	0/1:423:273,150:273:9701:150:5316:-328.13,0,-699.603	0/1:104:77,27:77:2752:27:955:-53.0485,0,-195.854	0/1:287:95,192:95:3357:192: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chr05	24368465	.	A	C	28049.1	PASS	AB=0.255897;ABP=5664.09;AC=47;AF=0.25;AN=188;AO=2824;CIGAR=1X;DP=22018;DPB=22018;DPRA=1.17528;EPP=6135.25;EPPR=41641;GTI=10;LEN=1;MEANALT=1.17544;MQM=59.5053;MQMR=59.9087;NS=94;NUMALT=1;ODDS=4.48223;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100480;QR=684193;RO=19179;RPL=2824;RPP=6135.25;RPPR=41649.7;RPR=0;RUN=1;SAF=2824;SAP=6135.25;SAR=0;SRF=19178;SRP=41641;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:135:99,36:99:3509:36:1296:-76.3049,0,-275.382	0/0:267:267,0:267:9529:0:0:0,-80.375,-857.494	0/1:399:300,99:300:10726:99:3539:-198.501,0,-845.12	0/0:485:482,3:482:17268:3:108:0,-135.924,-1543.62	0/0:183:181,2:181:6441:2:72:0,-48.2518,-572.941	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.855	0/1:296:219,77:219:7766:77:2736:-157.344,0,-609.864	0/0:314:314,0:314:11224:0:0:0,-94.5234,-1010.04	0/1:315:237,77:237:8476:77:2748:-152.608,0,-667.731	0/0:217:216,1:216:7715:1:36:0,-61.7252,-690.683	0/0:155:155,0:155:5521:0:0:0,-46.6596,-497.015	0/1:144:105,39:105:3738:39:1363:-79.52,0,-293.269	0/1:158:112,46:112:3997:46:1629:-99.2983,0,-312.356	0/1:186:137,48:137:4887:48:1695:-96.7422,0,-383.933	0/1:168:129,39:129:4598:39:1396:-75.3497,0,-363.375	0/0:125:125,0:125:4476:0:0:0,-37.6287,-403.006	0/0:168:168,0:168:6016:0:0:0,-50.573,-541.515	0/0:137:137,0:137:4895:0:0:0,-41.2411,-440.702	0/0:113:113,0:113:3995:0:0:0,-34.0164,-359.741	0/1:654:500,154:500:17901:154:5494:-297.459,0,-1413.77	0/1:359:258,101:258:9208:101:3587:-214.274,0,-720.611	0/1:445:319,126:319:11383:126:4432:-264.844,0,-890.318	0/1:89:66,23:66:2343:23:828:-48.0361,0,-184.338	0/0:249:242,7:242:8594:7:252:0,-51.9368,-750.442	0/0:217:217,0:217:7760:0:0:0,-65.3235,-698.284	0/0:664:663,0:663:23689:0:0:0,-199.583,-2130.98	0/0:517:517,0:517:18466:0:0:0,-155.633,-1661.3	0/1:73:55,18:55:1963:18:644:-36.3108,0,-154.969	0/1:593:444,149:444:15834:149:5298:-298.404,0,-1246.17	0/1:239:180,59:180:6425:59:2111:-118.267,0,-506.392	0/0:225:225,0:225:7966:0:0:0,-67.7317,-716.219	0/1:32:20,12:20:708:12:428:-29.2258,0,-54.4126	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/0:28:28,0:28:985:0:0:0,-8.42884,-88.9257	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/0:408:408,0:408:14533:0:0:0,-122.82,-1307.65	0/0:398:398,0:398:14161:0:0:0,-119.81,-1273.95	0/0:155:155,0:155:5515:0:0:0,-46.6596,-496.475	0/1:9:7,2:7:239:2:72:-4.12745,0,-19.1334	0/1:216:166,50:166:5905:50:1788:-96.0904,0,-466.515	0/0:132:132,0:132:4716:0:0:0,-39.736,-424.601	0/1:301:228,73:228:8160:73:2616:-144.976,0,-643.805	0/1:180:141,39:141:5008:39:1392:-71.3373,0,-396.681	0/0:121:121,0:121:4324:0:0:0,-36.4246,-388.846	0/0:176:176,0:176:6280:0:0:0,-52.9813,-565.281	0/1:366:269,97:269:9600:97:3462:-201.543,0,-753.71	0/1:542:401,141:401:14344:141:4998:-286.324,0,-1127.53	0/0:331:331,0:331:11823:0:0:0,-99.6409,-1063.88	0/0:287:287,0:287:10235:0:0:0,-86.3956,-921.054	0/0:466:464,1:464:16513:1:36:0,-136.74,-1482.22	0/1:24:16,8:16:572:8:288:-19.0427,0,-44.5887	0/1:298:214,84:214:7648:84:3008:-181.063,0,-598.648	0/0:93:93,0:93:3336:0:0:0,-27.9958,-300.452	0/1:72:61,11:61:2188:11:392:-13.9459,0,-175.501	0/1:386:291,95:291:10372:95:3355:-185.742,0,-816.809	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/1:27:23,4:23:824:4:135:-4.3547,0,-66.3537	0/1:40:31,9:31:1112:9:320:-17.0929,0,-88.3112	0/0:175:175,0:175:6226:0:0:0,-52.6802,-560.437	0/1:265:195,70:195:6963:70:2478:-143.417,0,-546.961	0/0:39:37,2:37:1328:2:72:0,-4.90345,-112.986	0/1:576:425,149:425:15182:149:5291:-303.141,0,-1192.86	0/1:422:307,114:307:10940:114:4021:-234.971,0,-857.29	0/1:182:138,44:138:4903:44:1576:-87.3441,0,-386.633	0/1:258:209,49:209:7488:49:1764:-81.3372,0,-596.258	0/0:369:366,3:366:13060:3:99:0,-101.843,-1165.66	0/1:104:69,35:69:2464:35:1260:-82.3902,0,-190.706	0/1:68:55,13:55:1968:13:464:-21.6275,0,-156.88	0/1:228:167,61:167:5976:61:2183:-128.029,0,-469.301	0/1:180:131,48:131:4688:48:1707:-99.66,0,-367.517	0/1:64:50,14:50:1788:14:489:-24.2827,0,-141.439	0/0:254:254,0:254:9041:0:0:0,-76.4616,-813.637	0/0:155:155,0:155:5502:0:0:0,-46.6596,-495.311	0/0:337:336,1:336:11970:1:36:0,-97.8488,-1073.52	0/0:500:500,0:500:17827:0:0:0,-150.515,-1603.97	0/1:370:259,111:259:9256:111:3963:-245.373,0,-721.591	0/0:228:224,3:224:7947:3:108:0,-58.6185,-705.127	0/1:55:37,18:37:1328:18:648:-42.0952,0,-103.266	0/0:372:372,0:372:13274:0:0:0,-111.983,-1194.41	0/1:300:228,72:228:8156:72:2574:-141.589,0,-643.747	0/0:673:671,2:671:23909:2:72:0,-195.756,-2144.25	0/1:188:148,40:148:5296:40:1436:-72.944,0,-420.163	0/1:167:125,42:125:4427:42:1458:-81.1826,0,-348.331	0/0:214:214,0:214:7632:0:0:0,-64.4204,-686.843	0/1:289:206,81:206:7351:81:2879:-172.465,0,-574.825	0/1:77:60,17:60:2136:17:604:-31.5079,0,-169.329	0/0:170:170,0:170:6071:0:0:0,-51.1751,-546.493	0/0:148:148,0:148:5270:0:0:0,-44.5524,-474.438	0/0:127:127,0:127:4544:0:0:0,-38.2308,-409.127	0/1:232:176,55:176:6245:55:1960:-106.595,0,-492.253	0/1:167:117,50:117:4168:50:1784:-110.567,0,-325.031	0/0:300:299,0:299:10649:0:0:0,-90.008,-957.93	0/0:179:177,0:177:6326:0:0:0,-53.2823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chr05	24879549	.	CGAA	CGAG,TGAG	295401	PASS	AB=0.512479,0.4827;ABP=12.5485,21.3428;AC=138,50;AF=0.734043,0.265957;AN=188;AO=9605,3425;CIGAR=3M1X,1X2M1X;DP=13097;DPB=13102;DPRA=0,1.60917;EPP=17514.4,6362.03;EPPR=0;GTI=0;LEN=1,4;MEANALT=2.34043,2.72308;MQM=59.9747,59.2117;MQMR=0;NS=94;NUMALT=2;ODDS=2.85492;PAIRED=0,0;PAIREDR=0;PAO=8,8;PQA=282,282;PQR=0;PRO=4;QA=341811,120842;QR=0;RO=0;RPL=9203,3296;RPP=17514.4,6362.03;RPPR=0;RPR=402,129;RUN=1,1;SAF=0,0;SAP=20860,7440.3;SAR=9605,3425;SRF=0;SRP=0;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:48:0,23,25:0:0:23,25:801,874:-136.435,-71.3002,-64.3765,-65.483,0,-57.9573	1/1:61:0,60,1:0:0:60,1:2131,36:-191.698,-18.0618,0,-188.761,-14.7646,-188.46	1/2:102:0,57,45:0:0:57,45:2013,1569:-291.736,-127.803,-110.644,-164.283,0,-150.737	1/1:119:0,117,1:0:0:117,1:4161,36:-374.378,-35.2205,0,-371.44,-32.2182,-371.139	1/1:32:0,31,1:0:0:31,1:1082,35:-97.3374,-9.33193,0,-94.4896,-6.13433,-94.1886	1/1:25:0,25,0:0:0:25,0:872,0:-78.7945,-7.52575,0,-78.7945,-7.52575,-78.7945	1/2:78:0,40,38:0:0:40,38:1403,1337:-223.253,-109.075,-97.0338,-114.458,0,-103.019	1/1:68:0,66,1:0:0:66,1:2372,30:-213.407,-19.868,0,-211.009,-17.4993,-210.708	1/2:48:0,22,25:0:0:22,25:783,877:-135.179,-71.3617,-64.7391,-63.8583,0,-56.3326	1/1:37:0,37,0:0:0:37,0:1319,0:-119.011,-11.1381,0,-119.011,-11.1381,-119.011	1/1:269:0,268,1:0:0:268,1:9553,36:-859.308,-80.676,0,-856.37,-77.3788,-856.069	1/1:83:0,83,0:0:0:83,0:2961,0:-266.722,-24.9855,0,-266.722,-24.9855,-266.722	1/2:69:0,36,32:0:0:36,32:1262,1129:-194.155,-92.0194,-81.1824,-102.242,0,-92.6087	1/2:39:0,16,23:0:0:16,23:576,823:-114.465,-67.4652,-62.6487,-47.3585,0,-40.4348	1/2:45:0,17,28:0:0:17,28:612,1007:-132.454,-82.5175,-77.4,-50.2959,0,-41.8671	1/1:38:0,38,0:0:0:38,0:1336,0:-120.471,-11.4391,0,-120.471,-11.4391,-120.471	1/2:18:0,9,8:0:0:9,8:320,272:-47.4985,-21.4103,-18.701,-26.0745,0,-23.6663	1/1:18:0,18,0:0:0:18,0:629,0:-56.9292,-5.41854,0,-56.9292,-5.41854,-56.9292	1/1:107:0,107,0:0:0:107,0:3802,0:-342.377,-32.2102,0,-342.377,-32.2102,-342.377	1/2:73:0,47,25:0:0:47,25:1688,890:-210.323,-72.6196,-58.4712,-137.787,0,-130.261	1/2:84:0,34,50:0:0:34,50:1216,1767:-243.089,-143.933,-133.697,-99.5115,0,-84.46	1/2:80:0,38,42:0:0:38,42:1356,1474:-230.71,-120.162,-108.723,-110.901,0,-98.2581	1/2:104:0,48,55:0:0:48,55:1707,1961:-298.998,-159.887,-145.438,-139.165,0,-122.608	1/1:15:0,14,1:0:0:14,1:490,35:-44.0813,-4.21442,0,-41.2335,-1.01682,-40.9325	1/1:52:0,51,0:0:0:51,0:1813,0:-163.198,-15.3525,0,-163.198,-15.3525,-163.198	1/1:44:0,44,0:0:0:44,0:1550,0:-139.79,-13.2453,0,-139.79,-13.2453,-139.79	1/1:156:0,155,1:0:0:155,1:5499,36:-494.68,-46.6597,0,-491.742,-43.3624,-491.441	1/2:12:0,5,7:0:0:5,7:180,250:-35.3173,-20.6283,-19.1232,-15.0469,0,-12.9397	1/2:135:0,91,44:0:0:91,44:3215,1558:-389.093,-127.267,-99.8731,-262.18,0,-248.935	1/2:103:0,56,47:0:0:56,47:1993,1676:-299.267,-136.969,-120.111,-162.655,0,-148.506	1/1:73:0,72,0:0:0:72,0:2547,0:-229.208,-21.6742,0,-229.208,-21.6742,-229.208	1/2:411:0,202,207:0:0:202,207:7219,7307:-1183.55,-594.95,-534.142,-588.701,0,-526.388	1/1:901:0,888,7:0:0:888,7:31581,252:-2840.86,-267.315,0,-2820.29,-246.744,-2818.19	1/1:250:0,250,0:0:0:250,0:8860,0:-797.392,-75.2575,0,-797.392,-75.2575,-797.392	1/1:756:0,752,1:0:0:752,1:26756,30:-2407.04,-226.375,0,-2404.64,-223.962,-2404.34	1/1:663:0,658,0:0:0:658,0:23465,0:-2110.92,-198.078,0,-2110.92,-198.078,-2110.92	1/1:128:0,128,0:0:0:128,0:4538,0:-408.589,-38.5318,0,-408.589,-38.5318,-408.589	1/1:105:0,104,0:0:0:104,0:3696,0:-332.503,-31.3071,0,-332.503,-31.3071,-332.503	1/1:238:0,237,0:0:0:237,0:8454,0:-760.51,-71.3441,0,-760.51,-71.3441,-760.51	1/2:205:0,107,97:0:0:107,97:3831,3437:-592.375,-279.956,-247.745,-312.416,0,-283.216	1/2:85:0,46,39:0:0:46,39:1628,1364:-243.918,-111.311,-97.4633,-132.959,0,-121.219	1/1:132:0,132,0:0:0:132,0:4739,0:-426.667,-39.736,0,-426.667,-39.736,-426.667	1/2:75:0,46,29:0:0:46,29:1644,1023:-217.687,-83.6404,-69.793,-134.401,0,-125.671	1/2:40:0,24,16:0:0:24,16:849,542:-113.439,-44.2802,-37.0555,-69.5031,0,-64.6866	1/1:29:0,29,0:0:0:29,0:1044,0:-94.2748,-8.72987,0,-94.2748,-8.72987,-94.2748	1/1:78:0,76,1:0:0:76,1:2703,36:-243.184,-22.8783,0,-240.246,-19.9109,-239.945	1/2:83:0,42,41:0:0:42,41:1500,1449:-240.628,-118.332,-105.689,-122.651,0,-110.309	1/2:74:0,46,28:0:0:46,28:1652,974:-214.281,-79.5177,-65.6703,-135.115,0,-126.686	1/2:55:0,26,29:0:0:26,29:932,1024:-159.745,-83.7289,-75.9021,-76.3721,0,-67.6422	1/1:44:0,44,0:0:0:44,0:1576,0:-142.132,-13.2453,0,-142.132,-13.2453,-142.132	1/1:40:0,40,0:0:0:40,0:1440,0:-129.898,-12.0412,0,-129.898,-12.0412,-129.898	1/2:541:0,333,205:0:0:333,205:11872,7240:-1557.19,-589.457,-489.214,-967.771,0,-906.06	1/2:84:0,44,40:0:0:44,40:1568,1387:-240.813,-112.998,-99.7522,-128.166,0,-116.125	1/1:67:0,67,0:0:0:67,0:2388,0:-215.178,-20.169,0,-215.178,-20.169,-215.178	1/2:249:0,121,125:0:0:121,125:4287,4411:-707.049,-358.782,-322.357,-348.261,0,-310.633	1/2:89:0,50,39:0:0:50,39:1792,1367:-257.732,-111.575,-96.5232,-146.511,0,-134.771	1/2:35: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chr05	24879558	.	C	T	50989.1	PASS	AB=0.461869;ABP=88.1282;AC=50;AF=0.265957;AN=188;AO=3131;CIGAR=1X;DP=12816;DPB=12816;DPRA=1.20332;EPP=6603.58;EPPR=19173.8;GTI=0;LEN=1;MEANALT=1.06452;MQM=59.2718;MQMR=59.9844;NS=94;NUMALT=1;ODDS=15.2884;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110628;QR=344587;RO=9677;RPL=3108;RPP=6603.58;RPPR=19173.8;RPR=23;RUN=1;SAF=0;SAP=6801.89;SAR=3131;SRF=0;SRP=21016.3;SRR=9677;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:24,23:24:864:23:817:-59.3855,0,-63.9342	0/0:61:61,0:61:2175:0:0:0,-18.3628,-196.016	0/1:96:54,42:54:1932:42:1489:-105.249,0,-145.258	0/0:119:118,1:118:4183:1:36:0,-32.2243,-373.055	0/0:31:30,1:30:1072:1:36:0,-5.73365,-93.1942	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/1:72:39,33:39:1400:33:1180:-84.8315,0,-104.625	0/0:67:66,1:66:2363:1:36:0,-16.5707,-209.329	0/1:47:23,24:23:815:24:856:-63.1057,0,-59.5224	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/0:274:273,1:273:9693:1:32:0,-79.2829,-869.095	0/0:82:82,0:82:2907:0:0:0,-24.6845,-261.867	0/1:66:35,31:35:1235:31:1092:-78.1446,0,-91.5855	0/1:40:19,21:19:671:21:748:-55.5995,0,-48.6746	0/1:43:17,26:17:608:26:928:-70.894,0,-42.1077	0/0:42:42,0:42:1491:0:0:0,-12.6433,-134.484	0/1:16:9,7:9:320:7:252:-18.2042,0,-24.3259	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6381	0/0:107:107,0:107:3797:0:0:0,-32.2102,-341.929	0/1:71:48,23:48:1724:23:816:-52.3862,0,-134.07	0/1:77:35,42:35:1235:42:1465:-108.307,0,-88.2741	0/1:74:36,38:36:1283:38:1344:-98.4909,0,-93.4964	0/1:101:48,53:48:1720:53:1888:-139.77,0,-124.681	0/0:15:14,1:14:500:1:36:0,-0.917175,-41.7379	0/0:53:53,0:53:1887:0:0:0,-15.9546,-170.108	0/0:46:46,0:46:1618:0:0:0,-13.8474,-145.905	0/0:157:157,0:157:5587:0:0:0,-47.2617,-502.956	0/1:12:5,7:5:176:7:244:-18.5749,0,-12.5727	0/1:126:87,39:87:3107:39:1384:-86.9281,0,-241.927	0/1:97:54,43:54:1936:43:1505:-106.096,0,-145.316	0/0:73:72,0:72:2564:0:0:0,-21.6742,-230.651	0/1:391:206,185:206:7333:185:6490:-466.279,0,-542.32	0/0:900:892,7:892:31829:7:252:0,-247.957,-2840.47	0/0:252:252,0:252:8967:0:0:0,-75.8596,-807.012	0/0:759:759,0:759:26982:0:0:0,-228.482,-2427.62	0/0:660:659,0:659:23440:0:0:0,-198.379,-2108.66	0/0:128:128,0:128:4541:0:0:0,-38.5318,-408.86	0/0:102:101,0:101:3598:0:0:0,-30.404,-323.667	0/0:232:232,0:232:8283:0:0:0,-69.839,-745.477	0/1:189:105,84:105:3735:84:3004:-213.669,0,-279.458	0/1:80:47,33:47:1668:33:1164:-80.9784,0,-126.325	0/0:132:132,0:132:4727:0:0:0,-39.736,-425.588	0/1:74:47,27:47:1675:27:960:-64.4308,0,-128.76	0/1:37:25,12:25:872:12:411:-26.1798,0,-67.6555	0/0:29:29,0:29:1035:0:0:0,-8.72987,-93.4631	0/0:78:77,1:77:2739:1:36:0,-19.8821,-243.155	0/1:86:46,40:46:1635:40:1415:-101.674,0,-121.549	0/1:68:43,25:43:1522:25:858:-57.0294,0,-116.802	0/1:53:25,27:25:883:27:960:-70.6891,0,-63.7743	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:520:328,191:328:11703:191:6780:-453.451,0,-896.458	0/1:81:43,38:43:1523:38:1341:-96.5161,0,-112.979	0/0:68:68,0:68:2411:0:0:0,-20.47,-217.247	0/1:231:120,111:120:4274:111:3936:-284.444,0,-315.301	0/1:83:47,36:47:1672:36:1292:-91.5835,0,-125.782	0/1:30:18,12:18:648:12:428:-29.8255,0,-49.621	0/1:391:231,160:231:8212:160:5653:-391.144,0,-621.395	0/1:425:207,218:207:7395:218:7701:-565.15,0,-537.658	0/0:59:58,1:58:2071:1:36:0,-14.1625,-183.062	0/1:87:44,43:44:1563:43:1536:-112.338,0,-114.771	0/1:324:185,139:185:6613:139:4868:-340.469,0,-497.715	0/1:54:25,29:25:896:29:1013:-75.2234,0,-64.7047	0/1:74:42,32:42:1483:32:1132:-79.8769,0,-111.487	0/1:25:15,10:15:536:10:360:-25.2139,0,-41.0491	0/1:52:41,11:41:1464:11:396:-20.3292,0,-116.402	0/0:95:94,1:94:3355:1:36:0,-24.9996,-298.569	0/1:120:41,79:41:1460:79:2764:-212.856,0,-95.5724	0/1:390:191,199:191:6782:199:7012:-513.187,0,-493	0/1:48:24,24:24:847:24:848:-62.1902,0,-62.0993	0/1:42:23,19:23:824:19:680:-48.8625,0,-61.8401	0/1:295:153,142:153:5480:142:5003:-361.583,0,-404.523	0/0:108:107,0:107:3816:0:0:0,-32.2102,-343.279	0/0:34:34,0:34:1215:0:0:0,-10.235,-109.656	0/0:133:133,0:133:4733:0:0:0,-40.037,-426.13	0/0:104:103,1:103:3675:1:36:0,-27.7114,-327.358	0/1:50:24,26:24:855:26:916:-67.7007,0,-62.2187	0/0:55:53,1:53:1891:1:36:0,-13.0258,-166.878	0/1:449:266,183:266:9532:183:6444:-444.624,0,-722.673	0/0:75:75,0:75:2679:0:0:0,-22.5772,-241.355	0/1:53:36,17:36:1262:17:608:-39.0892,0,-97.9264	0/0:80:80,0:80:2864:0:0:0,-24.0824,-257.997	0/1:44:20,24:20:711:24:844:-62.9143,0,-51.0703	0/1:52:29,23:29:1040:23:820:-58.4595,0,-78.2608	0/0:35:35,0:35:1243:0:0:0,-10.536,-112.174	0/1:100:46,54:46:1635:54:1924:-143.275,0,-117.335	0/1:24:13,11:13:464:11:392:-28.3789,0,-34.8728	0/0:57:57,0:57:2032:0:0:0,-17.1587,-183.153	0/0:58:58,0:58:2059:0:0:0,-17.4597,-185.581	0/0:432:431,1:431:15330:1:36:0,-126.447,-1375.83	0/1:677:309,368:309:10953:368:12999:-965.06,0,-781.879	0/1:56:27,29:27:963:29:1024:-75.5418,0,-70.1283	0/0:41:41,0:41:1409:0:0:0,-12.3422,-127.103	0/0:78:78,0:78:2763:0:0:0,-23.4803,-248.913
chr05	24882271	.	T	A	47524.9	PASS	AB=0.505612;ABP=4.52137;AC=50;AF=0.265957;AN=188;AO=2806;CIGAR=1X;DP=11325;DPB=11325;DPRA=0.967001;EPP=6096.16;EPPR=18493.1;GTI=3;LEN=1;MEANALT=1.07143;MQM=59.7327;MQMR=59.9237;NS=94;NUMALT=1;ODDS=0.994802;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100470;QR=302975;RO=8515;RPL=2806;RPP=6096.16;RPPR=18493.1;RPR=0;RUN=1;SAF=0;SAP=6096.16;SAR=2806;SRF=0;SRP=18493.1;SRR=8515;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:56:39,17:39:1389:17:612:-38.5394,0,-108.449	0/0:108:108,0:108:3861:0:0:0,-32.5112,-347.684	0/1:104:55,49:55:1920:49:1752:-126.654,0,-141.762	0/0:210:210,0:210:7503:0:0:0,-63.2163,-675.291	0/0:71:71,0:71:2533:0:0:0,-21.3731,-228.22	0/0:77:77,0:77:2738:0:0:0,-23.1793,-246.66	0/1:184:81,103:81:2870:103:3662:-274.393,0,-203.106	0/0:139:137,2:137:4830:2:72:0,-35.0064,-426.802	0/1:138:66,72:66:2357:72:2592:-191.942,0,-170.845	0/0:151:151,0:151:5307:0:0:0,-45.4555,-477.759	0/0:163:163,0:163:5792:0:0:0,-49.0679,-521.392	0/0:92:92,0:92:3282:0:0:0,-27.6948,-295.597	0/1:107:50,57:50:1770:57:2037:-151.377,0,-127.369	0/1:156:72,84:72:2584:84:3005:-223.716,0,-185.848	0/1:113:67,46:67:2381:46:1656:-115.31,0,-180.373	0/0:86:86,0:86:3077:0:0:0,-25.8886,-277.157	0/1:101:52,49:52:1868:49:1750:-126.67,0,-137.981	0/0:94:94,0:94:3357:0:0:0,-28.2968,-302.345	0/0:96:96,0:96:3418:0:0:0,-28.8989,-307.832	0/1:276:118,158:118:4161:158:5665:-426.87,0,-291.585	0/1:159:79,80:79:2844:80:2861:-209.822,0,-208.329	0/1:103:29,74:29:1044:74:2660:-208.637,0,-63.2669	0/1:134:65,69:65:2324:69:2430:-178.586,0,-169.082	0/0:150:144,6:144:5134:6:216:0,-25.3687,-442.41	0/0:96:96,0:96:3444:0:0:0,-28.8989,-310.172	0/0:337:337,0:337:11917:0:0:0,-101.447,-1072.38	0/0:210:209,1:209:7482:1:36:0,-59.618,-669.798	0/1:54:18,36:18:644:36:1296:-100.678,0,-42.035	0/1:266:119,147:119:4190:147:5280:-395.252,0,-297.201	0/1:139:68,71:68:2436:71:2547:-187.61,0,-177.648	0/0:166:166,0:166:5915:0:0:0,-49.971,-532.454	0/1:8:3,5:3:93:5:180:-14.1438,0,-6.26849	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:11:11,0:11:381:0:0:0,-3.31133,-34.6206	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4514	0/0:284:284,0:284:10160:0:0:0,-85.4925,-914.323	0/0:155:155,0:155:5549:0:0:0,-46.6596,-499.488	0/0:148:148,0:148:5304:0:0:0,-44.5524,-477.494	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/1:177:109,68:109:3841:68:2448:-167.269,0,-292.6	0/0:80:80,0:80:2861:0:0:0,-24.0824,-257.721	0/1:101:59,42:59:2097:42:1504:-105.244,0,-158.594	0/1:108:49,58:49:1741:58:2084:-155.255,0,-124.4	0/0:76:76,0:76:2717:0:0:0,-22.8783,-244.769	0/0:122:122,0:122:4323:0:0:0,-36.7257,-389.244	0/1:127:75,52:75:2658:52:1864:-129.792,0,-201.04	0/1:155:87,68:87:3064:68:2440:-173.176,0,-229.325	0/1:66:29,37:29:1010:37:1309:-98.224,0,-71.3389	0/0:180:180,0:180:6355:0:0:0,-54.1854,-571.953	0/0:174:174,0:174:6211:0:0:0,-52.3792,-559.083	0/1:4:3,1:3:104:1:36:-2.39415,0,-8.49869	0/1:179:108,71:108:3865:71:2556:-176.397,0,-294.045	0/0:73:73,0:73:2579:0:0:0,-21.9752,-232.353	0/1:23:9,14:9:320:14:504:-38.7662,0,-22.2187	0/1:136:58,78:58:2061:78:2808:-211.997,0,-144.818	0/1:84:43,41:43:1544:41:1451:-105.589,0,-113.967	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.751	0/1:16:4,12:4:144:12:432:-34.4038,0,-8.49714	0/0:125:125,0:125:4436:0:0:0,-37.6287,-399.332	0/1:186:89,97:89:3185:97:3473:-256.779,0,-230.88	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/1:174:92,82:92:3284:82:2940:-212.453,0,-243.399	0/1:205:102,103:102:3600:103:3708:-272.12,0,-262.492	0/1:66:33,33:33:1124:33:1171:-85.8277,0,-81.588	0/1:88:51,37:51:1813:37:1324:-92.9691,0,-136.957	0/0:172:171,1:171:6050:1:36:0,-48.1789,-540.984	0/1:170:62,108:62:2228:108:3876:-297.854,0,-149.523	0/1:71:47,24:47:1643:24:864:-56.6966,0,-125.841	0/1:123:60,63:60:2141:63:2252:-165.917,0,-155.926	0/1:141:64,76:64:2287:76:2736:-203.957,0,-163.587	0/1:32:21,11:21:752:11:392:-25.9871,0,-58.3733	0/0:145:145,0:145:5122:0:0:0,-43.6493,-461.119	0/0:73:73,0:73:2598:0:0:0,-21.9752,-234.065	0/0:315:315,0:315:11253:0:0:0,-94.8244,-1012.63	0/0:156:156,0:156:5554:0:0:0,-46.9607,-499.973	0/1:104:58,46:58:2061:46:1652:-117.612,0,-154.452	0/0:101:101,0:101:3530:0:0:0,-30.404,-317.902	0/1:12:4,8:4:144:8:279:-21.8352,0,-9.70126	0/0:88:88,0:88:3149:0:0:0,-26.4906,-283.633	0/1:72:43,29:43:1514:29:1017:-70.1389,0,-114.875	0/0:307:305,2:305:10786:2:72:0,-85.5819,-963.809	0/1:132:61,71:61:2188:71:2548:-189.828,0,-157.45	0/1:97:40,57:40:1436:57:2035:-154.218,0,-100.338	0/0:112:112,0:112:4017:0:0:0,-33.7154,-361.699	0/1:215:111,104:111:3950:104:3701:-268.353,0,-290.598	0/1:47:24,22:24:864:22:788:-57.0375,0,-63.8754	0/0:116:116,0:116:4157:0:0:0,-34.9195,-373.684	0/0:107:107,0:107:3829:0:0:0,-32.2102,-344.615	0/0:142:142,0:142:5055:0:0:0,-42.7463,-455.093	0/1:197:110,87:110:3933:87:3108:-220.357,0,-294.858	0/1:98:29,69:29:1029:69:2465:-192.601,0,-63.4179	0/0:86:86,0:86:3084:0:0:0,-25.8886,-277.702	0/0:153:151,1:151:5417:1:36:0,-42.5181,-484.057
chr05	24960209	.	A	G	149631	PASS	AB=0.487846;ABP=9.08042;AC=140;AF=0.744681;AN=188;AO=7029;CIGAR=1X;DP=9472;DPB=9472;DPRA=0;EPP=14903.7;EPPR=5165.4;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.9898;MQMR=59.9836;NS=94;NUMALT=1;ODDS=5.85735;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=251184;QR=87168;RO=2437;RPL=6987;RPP=14903.7;RPPR=5165.4;RPR=42;RUN=1;SAF=0;SAP=15266.3;SAR=7029;SRF=0;SRP=5294.89;SRR=2437;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:30,25:30:1076:25:896:-64.4037,0,-80.5962	1/1:148:0,148:0:0:148:5299:-477.044,-44.5524,0	0/1:187:97,90:97:3469:90:3228:-234.448,0,-256.128	1/1:366:1,365:1:36:365:13057:-1171.3,-106.579,0	1/1:46:0,46:0:0:46:1630:-146.987,-13.8474,0	1/1:61:0,61:0:0:61:2188:-197.186,-18.3628,0	0/1:115:54,61:54:1932:61:2158:-159.865,0,-139.538	1/1:152:0,151:0:0:151:5398:-485.67,-45.4555,0	0/1:145:76,69:76:2728:69:2478:-179.624,0,-202.113	1/1:96:0,96:0:0:96:3425:-308.463,-28.8989,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	1/1:64:0,64:0:0:64:2304:-207.62,-19.2659,0	0/1:65:39,26:39:1392:26:927:-64.1804,0,-106.012	0/1:48:25,22:25:885:22:779:-56.0674,0,-65.6026	0/1:49:18,31:18:648:31:1093:-83.9272,0,-43.9014	1/1:47:1,46:1:36:46:1652:-145.37,-10.5501,0	0/1:44:21,23:21:752:23:824:-61.238,0,-54.7609	1/1:42:0,42:0:0:42:1500:-135.295,-12.6433,0	1/1:42:0,42:0:0:42:1505:-135.744,-12.6433,0	0/1:223:117,106:117:4164:106:3745:-270.119,0,-307.813	0/1:145:61,84:61:2188:84:2987:-225.411,0,-153.536	0/1:200:144,55:144:5164:55:1964:-116.898,0,-404.764	0/1:98:38,60:38:1364:60:2148:-164.087,0,-93.5598	1/1:120:7,113:7:244:113:4031:-340.68,-13.8242,0	1/1:101:0,101:0:0:101:3620:-326.005,-30.404,0	1/1:295:0,295:0:0:295:10554:-949.772,-88.8039,0	1/1:228:1,227:1:36:227:8110:-726.317,-65.0366,0	0/1:30:12,18:12:432:18:644:-49.2597,0,-30.1903	0/1:409:179,230:179:6364:230:8242:-618.668,0,-448.278	0/1:89:43,46:43:1540:46:1630:-120.196,0,-112.101	1/1:137:0,137:0:0:137:4903:-441.421,-41.2411,0	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:198:0,197:0:0:197:7039:-633.21,-59.3029,0	1/1:169:0,169:0:0:169:6026:-542.445,-50.8741,0	1/1:47:0,47:0:0:47:1691:-152.477,-14.1484,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:194:100,94:100:3554:94:3372:-245.296,0,-261.667	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0	0/1:134:74,60:74:2652:60:2148:-153.249,0,-198.588	0/1:44:20,24:20:712:24:856:-64.1158,0,-51.1613	1/1:61:1,60:1:36:60:2151:-190.258,-14.7646,0	1/1:96:1,95:1:36:95:3386:-301.357,-25.3006,0	0/1:114:59,55:59:2112:55:1972:-143.437,0,-156.032	0/1:188:100,88:100:3580:88:3131:-225.421,0,-265.814	0/1:113:57,56:57:2033:56:2001:-146.346,0,-149.224	1/1:156:1,155:1:36:155:5548:-495.844,-43.3624,0	1/1:194:0,194:0:0:194:6958:-626.282,-58.3998,0	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/1:127:58,69:58:2080:69:2463:-183.693,0,-149.239	1/1:40:0,40:0:0:40:1412:-127.375,-12.0412,0	0/1:38:17,21:17:600:21:756:-56.9281,0,-42.8901	0/1:108:55,53:55:1976:53:1900:-138.767,0,-145.603	0/1:58:27,31:27:968:31:1112:-82.9316,0,-69.9776	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:31:21,10:21:756:10:356:-23.0493,0,-59.0353	1/1:75:0,75:0:0:75:2688:-242.165,-22.5773,0	0/1:83:37,46:37:1332:46:1652:-123.983,0,-95.1969	0/1:19:12,7:12:432:7:252:-17.3094,0,-33.5016	0/1:249:143,106:143:5109:106:3764:-264.004,0,-384.996	0/1:170:80,90:80:2861:90:3203:-237.317,0,-206.551	0/1:61:26,35:26:936:35:1260:-95.3427,0,-66.1966	0/1:84:33,51:33:1188:51:1824:-139.155,0,-81.9421	1/1:150:0,150:0:0:150:5384:-484.463,-45.1545,0	0/1:150:94,55:94:3361:55:1961:-131.698,0,-257.64	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:89:38,51:38:1368:51:1820:-137.29,0,-96.6292	0/1:81:48,33:48:1728:33:1180:-82.1246,0,-131.422	0/1:13:8,5:8:284:5:180:-12.6387,0,-21.99	1/1:144:0,144:0:0:144:5129:-461.751,-43.3483,0	1/1:97:0,97:0:0:97:3467:-312.242,-29.1999,0	1/1:225:0,225:0:0:225:8023:-722.09,-67.7318,0	1/1:179:0,179:0:0:179:6394:-575.548,-53.8844,0	0/1:140:68,72:68:2409:72:2580:-190.305,0,-174.921	1/1:102:0,102:0:0:102:3611:-325.194,-30.7051,0	0/1:15:11,4:11:396:4:140:-8.42913,0,-31.4673	1/1:112:0,111:0:0:111:3931:-353.731,-33.4143,0	0/1:100:55,45:55:1964:45:1616:-115.627,0,-146.932	1/1:233:3,230:3:108:230:8222:-729.916,-60.0648,0	0/1:80:36,44:36:1296:44:1580:-118.409,0,-92.8615	0/1:56:26,30:26:936:30:1080:-80.6556,0,-67.7018	1/1:68:0,68:0:0:68:2436:-219.495,-20.47,0	0/1:123:66,57:66:2376:57:2029:-145.854,0,-177.071	0/1:34:20,14:20:703:14:504:-35.4631,0,-53.3585	1/1:60:0,60:0:0:60:2152:-193.947,-18.0618,0	1/1:56:0,56:0:0:56:1992:-179.551,-16.8577,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/1:48:22,26:22:788:26:936:-70.11,0,-56.7954	0/1:62:42,20:42:1508:20:716:-46.1039,0,-117.351	1/1:112:1,111:1:36:111:3965:-353.442,-30.1171,0	1/1:86:0,86:0:0:86:3084:-277.788,-25.8886,0
chr05	25029373	.	T	C	215053	PASS	AB=0.485929;ABP=15.8436;AC=137;AF=0.728723;AN=188;AO=10340;CIGAR=1X;DP=14192;DPB=14192;DPRA=0;EPP=22403.9;EPPR=8272.16;GTI=1;LEN=1;MEANALT=1.08511;MQM=59.975;MQMR=59.9969;NS=94;NUMALT=1;ODDS=2.84534;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=368211;QR=137369;RO=3844;RPL=6;RPP=22403.9;RPPR=8272.16;RPR=10334;RUN=1;SAF=10340;SAP=22456;SAR=0;SRF=3844;SRP=8350.15;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:120:68,52:68:2436:52:1864:-131.911,0,-183.372	1/1:108:1,107:1:36:107:3824:-340.759,-28.913,0	0/1:280:156,124:156:5588:124:4433:-314.662,0,-418.754	1/1:319:0,319:0:0:319:11309:-1017.7,-96.0286,0	1/1:113:1,112:1:36:112:3966:-353.536,-30.4181,0	1/1:33:0,33:0:0:33:1180:-106.508,-9.93399,0	0/1:142:78,64:78:2764:64:2280:-162.716,0,-206.254	1/1:270:0,270:0:0:270:9658:-869.17,-81.2781,0	0/1:190:109,81:109:3883:81:2873:-201.612,0,-292.467	1/1:107:0,107:0:0:107:3791:-341.389,-32.2102,0	1/1:98:0,98:0:0:98:3495:-314.761,-29.5009,0	1/1:134:0,134:0:0:134:4792:-431.437,-40.338,0	0/1:126:62,64:62:2204:64:2295:-168.881,0,-160.696	0/1:92:49,42:49:1760:42:1487:-106.37,0,-130.93	0/1:92:45,47:45:1608:47:1688:-124.512,0,-117.315	1/1:87:0,87:0:0:87:3102:-279.407,-26.1896,0	0/1:49:26,23:26:919:23:824:-59.7328,0,-68.2757	1/1:50:0,50:0:0:50:1800:-162.282,-15.0515,0	1/1:51:0,51:0:0:51:1810:-163.18,-15.3525,0	0/1:232:123,108:123:4377:108:3872:-278.777,0,-324.207	0/1:246:117,129:117:4173:129:4559:-336.426,0,-301.698	0/1:183:145,38:145:5183:38:1348:-66.5318,0,-411.522	0/1:143:66,77:66:2347:77:2743:-204.065,0,-168.442	0/1:125:16,108:16:572:108:3847:-308.739,0,-14.126	1/1:157:0,157:0:0:157:5623:-506.19,-47.2617,0	1/1:368:2,366:2:72:366:13027:-1165.4,-103.942,0	1/1:437:0,437:0:0:437:15519:-1396.42,-131.55,0	0/1:50:19,31:19:684:31:1087:-83.0869,0,-46.8388	0/1:427:202,225:202:7203:225:8013:-592.655,0,-519.788	0/1:133:59,74:59:2120:74:2642:-197.989,0,-151.027	1/1:134:0,133:0:0:133:4720:-424.759,-40.037,0	0/1:17:6,11:6:212:11:392:-30.5025,0,-14.3073	1/1:52:0,52:0:0:52:1872:-168.759,-15.6536,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:28:0,28:0:0:28:992:-89.5944,-8.42884,0	1/1:60:0,60:0:0:60:2144:-193.228,-18.0618,0	1/1:231:0,231:0:0:231:8193:-737.391,-69.5379,0	1/1:169:0,169:0:0:169:6007:-540.738,-50.8741,0	1/1:61:0,61:0:0:61:2165:-195.116,-18.3628,0	0/1:15:10,5:10:360:5:167:-10.843,0,-28.2289	0/1:149:80,69:80:2868:69:2444:-175.36,0,-213.503	1/1:57:0,57:0:0:57:2019:-181.983,-17.1587,0	0/1:228:117,111:117:4171:111:3945:-286.608,0,-306.939	0/1:80:44,36:44:1576:36:1292:-92.5014,0,-118.049	1/1:69:0,69:0:0:69:2467:-222.278,-20.7711,0	1/1:156:1,155:1:36:155:5503:-491.8,-43.3624,0	0/1:232:115,117:115:4110:117:4168:-305.466,0,-300.245	0/1:358:181,177:181:6486:177:6309:-460.135,0,-476.054	0/1:168:79,89:79:2832:89:3170:-234.947,0,-204.545	1/1:281:0,281:0:0:281:10034:-902.998,-84.5894,0	1/1:305:0,304:0:0:304:10835:-974.697,-91.5131,0	0/1:47:19,28:19:680:28:996:-75.8065,0,-47.3808	0/1:257:120,137:120:4300:137:4872:-361.269,0,-309.812	1/1:78:0,78:0:0:78:2757:-248.362,-23.4803,0	0/1:18:16,2:16:568:2:68:-1.03917,0,-46.0333	0/1:251:126,124:126:4498:124:4373:-318.13,0,-329.371	0/1:103:64,39:64:2280:39:1374:-92.951,0,-174.456	0/1:37:11,26:11:392:26:936:-73.4214,0,-24.4819	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	1/1:129:1,128:1:36:128:4524:-403.105,-35.2346,0	0/1:147:65,82:65:2319:82:2923:-219.054,0,-164.718	0/1:31:11,20:11:388:20:720:-55.7968,0,-25.9254	0/1:325:158,167:158:5655:167:5973:-439.842,0,-411.235	0/1:303:157,146:157:5615:146:5202:-377.108,0,-414.26	0/1:76:44,32:44:1571:32:1144:-80.3912,0,-118.803	0/1:172:79,93:79:2824:93:3327:-247.87,0,-202.622	1/1:205:3,202:3:108:202:7194:-637.434,-51.636,0	0/1:231:170,61:170:6108:61:2170:-126.028,0,-480.28	0/1:57:22,35:22:788:35:1256:-96.1866,0,-54.0861	0/1:152:79,73:79:2828:73:2616:-189.93,0,-209.002	0/1:79:40,39:40:1436:39:1400:-102.518,0,-105.756	0/1:45:23,22:23:816:22:775:-56.5248,0,-60.2154	1/1:201:1,200:1:36:200:7111:-636.455,-56.9088,0	1/1:127:0,127:0:0:127:4536:-408.408,-38.2308,0	1/1:206:0,206:0:0:206:7309:-657.865,-62.0122,0	1/1:389:0,389:0:0:389:13892:-1250.05,-117.101,0	0/1:234:118,116:118:4205:116:4142:-302.522,0,-308.19	1/1:170:0,170:0:0:170:6083:-547.572,-51.1751,0	0/1:31:17,14:17:612:14:500:-36.0042,0,-46.0815	1/1:208:0,208:0:0:208:7421:-667.936,-62.6142,0	0/1:275:125,149:125:4471:149:5305:-394.744,0,-319.717	1/1:378:0,378:0:0:378:13444:-1209.73,-113.789,0	0/1:79:40,39:40:1436:39:1392:-101.798,0,-105.756	0/1:152:88,64:88:3148:64:2286:-160.22,0,-237.789	1/1:92:0,91:0:0:91:3247:-292.092,-27.3937,0	0/1:176:84,92:84:2995:92:3278:-242.258,0,-216.801	0/1:40:26,14:26:924:14:500:-33.295,0,-71.4365	1/1:88:0,88:0:0:88:3133:-282.195,-26.4906,0	1/1:101:0,101:0:0:101:3597:-323.936,-30.404,0	1/1:105:1,104:1:36:104:3695:-329.156,-28.0099,0	0/1:170:91,79:91:3252:79:2787:-199.895,0,-241.726	0/1:89:60,29:60:2140:29:1008:-64.2386,0,-166.076	1/1:145:0,145:0:0:145:5187:-466.969,-43.6494,0	1/1:148:2,146:2:72:146:5201:-461.393,-37.7157,0
chr05	25073618	.	C	T	28445.3	PASS	AB=0.480436;ABP=14.9055;AC=46;AF=0.244681;AN=188;AO=1728;CIGAR=1X;DP=7652;DPB=7652;DPRA=0.895282;EPP=3755.31;EPPR=12866.8;GTI=1;LEN=1;MEANALT=1;MQM=59.9832;MQMR=59.9895;NS=94;NUMALT=1;ODDS=5.66544;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61780;QR=210760;RO=5924;RPL=1728;RPP=3755.31;RPPR=12866.8;RPR=0;RUN=1;SAF=0;SAP=3755.31;SAR=1728;SRF=0;SRP=12866.8;SRR=5924;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:11,16:11:381:16:561:-42.6893,0,-26.4928	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:92:92,0:92:3263:0:0:0,-27.6948,-293.887	0/0:184:184,0:184:6555:0:0:0,-55.3895,-590.03	0/1:43:17,26:17:612:26:932:-71.2546,0,-42.4691	0/1:26:16,10:16:527:10:360:-24.9175,0,-39.9131	0/1:65:37,28:37:1309:28:993:-70.1156,0,-98.5426	0/0:64:63,1:63:2214:1:36:0,-15.6676,-195.924	0/0:42:42,0:42:1493:0:0:0,-12.6433,-134.663	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/1:96:50,46:50:1796:46:1652:-120.07,0,-133.023	0/1:151:75,76:75:2658:76:2732:-200.667,0,-194.008	0/0:94:94,0:94:3331:0:0:0,-28.2968,-300.005	0/0:102:102,0:102:3638:0:0:0,-30.7051,-327.622	0/0:76:76,0:76:2736:0:0:0,-22.8783,-246.482	0/1:85:44,41:44:1572:41:1471:-107.099,0,-116.184	0/1:47:22,25:22:777:25:885:-65.8181,0,-56.102	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/1:65:36,29:36:1292:29:1036:-73.987,0,-97.0168	0/1:240:97,143:97:3450:143:5116:-388.333,0,-238.464	0/1:138:82,56:82:2917:56:2016:-140.171,0,-221.222	0/1:52:27,25:27:968:25:896:-65.3068,0,-71.7838	0/0:115:115,0:115:4094:0:0:0,-34.6184,-368.644	0/0:45:42,3:42:1493:3:108:0,-3.47118,-124.587	0/1:58:37,21:37:1328:21:756:-50.9075,0,-102.362	0/0:166:166,0:166:5918:0:0:0,-49.971,-532.728	0/1:244:140,104:140:4956:104:3717:-261.279,0,-372.737	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.229	0/0:197:197,0:197:6977:0:0:0,-59.3029,-627.995	0/1:65:44,21:44:1553:21:756:-48.8003,0,-120.493	0/1:90:43,47:43:1521:47:1688:-125.114,0,-110.088	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/1:16:8,8:8:288:8:288:-21.4509,0,-21.4509	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:18:11,7:11:392:7:252:-17.6104,0,-30.2015	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/1:234:111,123:111:3879:123:4408:-326.451,0,-278.859	0/1:54:23,31:23:809:31:1107:-83.6854,0,-56.8727	0/0:76:76,0:76:2702:0:0:0,-22.8783,-243.421	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:142:142,0:142:5096:0:0:0,-42.7463,-458.782	0/1:64:36,28:36:1288:28:1004:-71.4099,0,-96.9577	0/1:127:77,50:77:2719:50:1781:-122.34,0,-206.719	0/1:74:28,46:28:996:46:1635:-125.162,0,-67.6787	0/0:72:72,0:72:2554:0:0:0,-21.6742,-230.108	0/0:74:74,0:74:2618:0:0:0,-22.2762,-235.865	0/0:36:36,0:36:1258:0:0:0,-10.8371,-113.518	0/1:125:67,58:67:2332:58:2084:-150.201,0,-172.506	0/1:52:32,20:32:1152:20:705:-48.1192,0,-88.3366	0/1:91:59,32:59:2109:32:1148:-76.2361,0,-162.683	0/1:42:18,24:18:618:24:841:-63.3631,0,-43.295	0/1:8:5,3:5:176:3:108:-7.66693,0,-13.7768	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/1:72:31,41:31:1104:41:1457:-109.75,0,-77.9965	0/1:9:3,6:3:100:6:216:-17.0812,0,-6.62117	0/0:124:124,0:124:4406:0:0:0,-37.3277,-396.712	0/1:36:20,16:20:705:16:572:-40.9763,0,-52.9357	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	0/1:54:31,23:31:1116:23:828:-58.5885,0,-84.4961	0/0:127:126,1:126:4502:1:36:0,-34.6325,-401.661	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:179:179,0:179:6382:0:0:0,-53.8844,-574.469	0/1:83:54,29:54:1932:29:1029:-67.9357,0,-149.171	0/0:41:40,1:40:1436:1:36:0,-8.74395,-125.939	0/0:93:93,0:93:3314:0:0:0,-27.9958,-298.476	0/0:66:66,0:66:2338:0:0:0,-19.868,-210.676	0/0:91:91,0:91:3223:0:0:0,-27.3937,-290.289	0/0:89:88,1:88:3137:1:36:0,-23.1934,-278.957	0/0:30:30,0:30:1065:0:0:0,-9.0309,-96.1598	0/1:40:19,21:19:665:21:720:-53.073,0,-48.1316	0/1:25:18,7:18:644:7:252:-15.5032,0,-50.7648	0/1:70:47,23:47:1680:23:828:-53.772,0,-130.415	0/0:76:76,0:76:2687:0:0:0,-22.8783,-242.071	0/0:120:120,0:120:4241:0:0:0,-36.1236,-381.865	0/0:138:138,0:138:4956:0:0:0,-41.5421,-446.188	0/1:90:51,39:51:1817:39:1385:-97.855,0,-136.717	0/0:121:121,0:121:4325:0:0:0,-36.4246,-389.425	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	0/1:71:29,42:29:1044:42:1508:-114.641,0,-72.9017	0/1:71:42,29:42:1493:29:1040:-72.5412,0,-113.289	0/0:181:181,0:181:6390:0:0:0,-54.4864,-575.186	0/0:83:83,0:83:2965:0:0:0,-24.9855,-267.082	0/0:94:94,0:94:3342:0:0:0,-28.2968,-300.995	0/1:69:41,28:41:1438:28:1004:-69.9044,0,-108.941	0/1:158:84,74:84:2981:74:2664:-192.442,0,-220.96	0/0:32:31,1:31:1108:1:36:0,-6.50932,-96.9074	0/0:88:88,0:88:3141:0:0:0,-26.4906,-282.914	0/0:129:128,1:128:4577:1:36:0,-35.2346,-408.496	0/0:85:85,0:85:3048:0:0:0,-25.5875,-274.549	0/1:219:93,126:93:3336:126:4520:-341.041,0,-234.531	0/1:80:24,56:24:864:56:1965:-153.037,0,-54.0002	0/0:136:136,0:136:4835:0:0:0,-40.9401,-435.302	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.057
chr05	25151839	.	C	T	130697	PASS	AB=0.328176;ABP=1726.78;AC=137;AF=0.728723;AN=188;AO=6663;CIGAR=1X;DP=11249;DPB=11249;DPRA=0;EPP=14471.5;EPPR=9950.53;GTI=9;LEN=1;MEANALT=1.05319;MQM=59.8343;MQMR=49.7837;NS=94;NUMALT=1;ODDS=1.43002;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=237002;QR=162105;RO=4581;RPL=10;RPP=14384.8;RPPR=9.06302;RPR=6653;RUN=1;SAF=10;SAP=14384.8;SAR=6653;SRF=2347;SRP=9.06302;SRR=2234;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:18:10,8:10:356:8:288:-20.8489,0,-26.3876	1/1:168:0,168:0:0:168:5997:-539.718,-50.573,0	0/1:166:89,77:89:3188:77:2720:-195.065,0,-231.098	1/1:218:1,217:1:36:217:7747:-693.695,-62.1218,0	1/1:103:0,103:0:0:103:3657:-329.333,-31.0061,0	1/1:88:0,88:0:0:88:3122:-281.202,-26.4906,0	0/1:136:98,38:98:3488:38:1360:-81.7605,0,-268.013	1/1:176:1,175:1:32:175:6249:-559.276,-49.782,0	0/1:174:111,63:111:3923:63:2254:-150.737,0,-292.442	1/1:104:0,104:0:0:104:3653:-328.969,-31.3071,0	1/1:31:0,31:0:0:31:1100:-99.3103,-9.33193,0	1/1:65:0,65:0:0:65:2293:-205.69,-19.567,0	0/1:98:77,21:77:2752:21:744:-37.7834,0,-208.695	0/1:84:65,19:65:2275:19:660:-34.4348,0,-173.857	0/1:99:70,29:70:2449:29:1024:-62.6665,0,-185.972	1/1:32:1,31:1:36:31:1116:-98.0155,-6.89676,0	0/1:89:68,21:68:2394:21:735:-39.6597,0,-180.999	1/1:40:0,40:0:0:40:1432:-128.237,-12.0412,0	1/1:28:0,28:0:0:28:999:-90.2175,-8.42884,0	0/1:310:222,88:222:7876:88:3107:-186.54,0,-603.584	0/1:263:170,93:170:5955:93:3280:-215.645,0,-444.616	0/1:153:104,49:104:3688:49:1752:-111.906,0,-283.31	0/1:118:70,48:70:2495:48:1728:-120.284,0,-186.717	1/1:107:7,100:7:248:100:3523:-294.942,-9.87009,0	1/1:81:0,81:0:0:81:2904:-261.581,-24.3834,0	1/1:259:0,259:0:0:259:9246:-831.59,-77.9668,0	1/1:248:1,247:1:36:247:8789:-787.661,-72.0967,0	0/1:39:27,12:27:964:12:428:-27.1168,0,-72.9858	0/1:489:322,167:322:11444:167:5956:-388.943,0,-872.535	0/1:139:86,53:86:3067:53:1892:-128.704,0,-223.707	1/1:180:1,179:1:36:179:6335:-566.93,-51.2826,0	0/0:49:48,1:48:1676:1:36:0,-11.1522,-142.237	1/1:27:0,27:0:0:27:955:-86.2648,-8.12781,0	1/1:15:0,15:0:0:15:528:-47.8514,-4.51545,0	1/1:60:0,60:0:0:60:2140:-192.863,-18.0618,0	1/1:97:0,97:0:0:97:3475:-312.949,-29.1999,0	1/1:100:1,99:1:36:99:3519:-313.377,-27.0485,0	1/1:132:0,132:0:0:132:4699:-423.064,-39.736,0	1/1:40:0,40:0:0:40:1378:-124.311,-12.0412,0	0/1:65:36,29:36:1262:29:1040:-74.3474,0,-89.1224	0/1:199:126,73:126:4438:73:2594:-173.8,0,-328.435	1/1:37:0,37:0:0:37:1319:-119.01,-11.1381,0	0/1:194:139,55:139:4865:55:1972:-119.354,0,-370.064	0/1:102:75,27:75:2661:27:956:-55.6507,0,-202.695	1/1:34:0,34:0:0:34:1208:-107.906,-10.235,0	1/1:73:0,73:0:0:73:2612:-235.328,-21.9752,0	0/1:247:134,113:134:4767:113:4016:-287.045,0,-344.704	0/1:298:197,101:197:6945:101:3612:-235.56,0,-525.915	0/1:148:108,39:108:3841:39:1392:-80.9679,0,-296.427	1/1:128:3,125:3:108:125:4445:-390.407,-28.7243,0	1/1:107:0,107:0:0:107:3807:-342.827,-32.2102,0	0/1:73:56,17:56:1999:17:599:-32.2629,0,-153.001	0/1:273:199,74:199:7089:74:2614:-153.326,0,-526.552	1/1:20:1,19:1:36:19:684:-58.2921,-2.42233,0	0/1:48:35,13:35:1247:13:460:-27.2859,0,-92.7521	0/1:179:119,60:119:4219:60:2137:-138.712,0,-314.8	0/1:87:47,40:47:1676:40:1413:-101.276,0,-122.584	0/1:48:41,7:41:1443:7:252:-8.57952,0,-113.486	0/1:54:39,14:39:1365:14:504:-29.5235,0,-104.89	1/1:88:0,88:0:0:88:3124:-281.388,-26.4906,0	0/1:87:61,26:61:2127:26:916:-56.5668,0,-161.649	0/1:44:35,9:35:1239:9:324:-16.2605,0,-95.9628	0/1:290:191,98:191:6803:98:3508:-228.573,0,-517.546	0/1:200:128,72:128:4526:72:2557:-170.174,0,-339.738	0/1:61:30,31:30:1057:31:1083:-79.4121,0,-75.142	0/1:147:109,37:109:3862:37:1328:-75.5121,0,-297.705	1/1:206:1,205:1:36:205:7345:-657.48,-58.4139,0	0/1:142:115,27:115:4082:27:972:-45.0516,0,-320.237	0/1:28:21,7:21:739:7:252:-14.6001,0,-56.0721	0/1:153:87,66:87:3063:66:2327:-163.626,0,-222.815	0/1:87:52,35:52:1852:35:1252:-86.7955,0,-138.117	0/1:70:38,32:38:1356:32:1152:-82.9074,0,-99.42	1/1:89:0,89:0:0:89:3155:-284.165,-26.7917,0	1/1:63:0,63:0:0:63:2235:-201.413,-18.9649,0	1/1:177:0,177:0:0:177:6296:-566.707,-53.2823,0	1/1:172:1,170:1:36:170:6075:-543.389,-48.2836,0	0/1:114:67,47:67:2350:47:1653:-114.733,0,-173.094	1/1:79:1,78:1:36:78:2756:-244.892,-20.3938,0	0/1:107:69,38:69:2450:38:1343:-88.9589,0,-178.014	1/1:131:0,131:0:0:131:4649:-417.791,-39.4349,0	0/1:206:141,65:141:4974:65:2307:-145.876,0,-374.769	1/1:333:0,333:0:0:333:11853:-1066.61,-100.243,0	0/1:102:75,27:75:2670:27:968:-56.7323,0,-203.095	0/1:97:71,26:71:2492:26:919:-53.8263,0,-190.541	1/1:72:0,72:0:0:72:2552:-229.305,-21.6742,0	0/1:115:77,38:77:2706:38:1340:-86.2793,0,-204.991	0/1:61:46,15:46:1639:15:536:-30.2096,0,-123.617	1/1:28:0,28:0:0:28:982:-88.6854,-8.42884,0	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0	1/1:35:0,35:0:0:35:1230:-111.001,-10.5361,0	0/1:109:79,30:79:2751:30:1072:-63.9802,0,-205.603	0/1:112:80,32:80:2812:32:1143:-69.464,0,-216.512	1/1:97:1,96:1:36:96:3428:-305.229,-25.6972,0	1/1:76:0,76:0:0:76:2702:-243.424,-22.8783,0
chr05	25222758	.	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chr05	25551901	.	G	T	210066	PASS	AB=0.477703;ABP=23.5393;AC=141;AF=0.75;AN=188;AO=7738;CIGAR=1X;DP=10250;DPB=10250;DPRA=0;EPP=17.5983;EPPR=52.5259;GTI=0;LEN=1;MEANALT=1.07447;MQM=57.821;MQMR=51.818;NS=94;NUMALT=1;ODDS=10.201;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=276483;QR=88065;RO=2505;RPL=17;RPP=16658.5;RPPR=5373.28;RPR=7721;RUN=1;SAF=3772;SAP=13.5719;SAR=3966;SRF=1141;SRP=46.1181;SRR=1364;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:82:38,44:38:1332:44:1580:-117.646,0,-94.554	1/1:136:0,136:0:0:136:4876:-438.519,-40.9401,0	0/1:140:68,72:68:2398:72:2590:-190.974,0,-171.855	1/1:180:1,179:1:36:179:6391:-571.306,-50.6369,0	1/1:87:0,87:0:0:87:3099:-278.385,-26.1896,0	1/1:65:0,65:0:0:65:2324:-209.038,-19.567,0	0/1:151:75,76:75:2619:76:2712:-198.637,0,-189.107	1/1:177:1,176:1:32:176:6303:-562.844,-50.0845,0	0/1:117:40,77:40:1423:77:2744:-211.844,0,-91.8451	1/1:96:0,96:0:0:96:3412:-307.201,-28.8989,0	1/1:100:0,100:0:0:100:3584:-322.552,-30.103,0	1/1:157:0,157:0:0:157:5620:-505.266,-47.2617,0	0/1:115:53,62:53:1870:62:2220:-165.069,0,-132.182	0/1:122:53,69:53:1877:69:2437:-182.761,0,-131.708	0/1:140:79,61:79:2797:61:2184:-154.567,0,-207.352	1/1:127:1,126:1:36:126:4516:-402.43,-34.6342,0	0/1:84:43,41:43:1539:41:1468:-106.998,0,-112.828	1/1:80:0,80:0:0:80:2872:-258.611,-24.0824,0	1/1:68:0,68:0:0:68:2427:-218.183,-20.47,0	0/1:111:61,50:61:2168:50:1777:-126.217,0,-160.276	0/1:165:82,83:82:2905:83:2963:-216.581,0,-210.242	0/1:42:29,13:29:1031:13:464:-29.4493,0,-79.5999	0/1:109:59,50:59:2011:50:1791:-128.568,0,-146.182	1/1:110:9,101:9:315:101:3604:-295.955,-4.74518,0	1/1:90:0,90:0:0:90:3197:-287.402,-27.0927,0	1/1:274:1,273:1:36:273:9744:-872.804,-78.8839,0	1/1:250:0,250:0:0:250:8949:-804.678,-75.2575,0	0/1:74:25,49:25:883:49:1760:-136.247,0,-56.8261	0/1:218:109,109:109:3821:109:3885:-283.889,0,-276.206	1/1:117:3,114:3:108:114:4059:-354.843,-25.2398,0	1/1:102:0,102:0:0:102:3624:-326.117,-30.7051,0	0/1:7:3,4:3:104:4:139:-10.7178,0,-7.58043	1/1:16:0,16:0:0:16:567:-51.132,-4.81648,0	1/1:13:0,13:0:0:13:468:-42.3247,-3.91339,0	1/1:18:1,17:1:36:17:612:-51.7078,-1.85992,0	1/1:23:0,23:0:0:23:828:-74.7905,-6.92369,0	1/1:350:0,348:0:0:348:12406:-1114.52,-104.758,0	1/1:69:0,69:0:0:69:2465:-221.706,-20.7711,0	1/1:92:1,91:1:32:91:3260:-290.041,-24.4954,0	0/1:4:3,1:3:108:1:36:-2.39244,0,-8.77657	0/1:115:45,70:45:1600:70:2478:-188.595,0,-108.604	1/1:56:0,56:0:0:56:2004:-179.608,-16.8577,0	0/1:158:91,66:91:3180:66:2368:-165.364,0,-237.142	0/1:136:67,69:67:2350:69:2472:-181.573,0,-169.905	1/1:110:0,110:0:0:110:3940:-353.805,-33.1133,0	1/1:95:0,95:0:0:95:3393:-305.392,-28.5979,0	0/1:101:47,54:47:1650:54:1936:-143.814,0,-117.03	0/1:165:74,91:74:2570:91:3256:-243.407,0,-180.383	0/1:69:50,19:50:1760:19:676:-40.3005,0,-136.898	1/1:140:0,140:0:0:140:4974:-447.36,-42.1442,0	1/1:106:0,106:0:0:106:3784:-340.225,-31.9092,0	1/1:137:5,132:5:171:132:4736:-410.495,-25.6535,0	0/1:92:52,40:52:1829:40:1412:-99.5883,0,-136.54	1/1:45:0,45:0:0:45:1601:-143.165,-13.5464,0	0/1:21:14,7:14:496:7:252:-16.7039,0,-38.3565	0/1:109:57,52:57:2011:52:1856:-134.281,0,-146.86	0/1:52:27,25:27:945:25:900:-65.6271,0,-68.8546	0/1:7:4,3:4:144:3:108:-7.96661,0,-11.0048	0/1:9:7,2:7:248:2:72:-4.1265,0,-19.7276	1/1:101:0,101:0:0:101:3591:-322.849,-30.404,0	0/1:145:85,60:85:2991:60:2141:-149.054,0,-222.755	0/1:8:3,5:3:108:5:180:-14.0543,0,-7.57363	0/1:133:75,57:75:2626:57:2032:-143.185,0,-194.126	0/1:137:89,47:89:3145:47:1684:-110.429,0,-239.023	0/1:64:32,32:32:1137:32:1136:-83.1839,0,-82.6026	0/1:70:36,33:36:1284:33:1184:-84.5628,0,-94.0357	1/1:123:1,122:1:36:122:4350:-387.733,-33.4782,0	0/1:100:48,52:48:1707:52:1861:-137.379,0,-121.938	0/1:50:29,21:29:1028:21:752:-52.9096,0,-77.1327	0/1:66:34,32:34:1197:32:1152:-83.8592,0,-87.303	0/1:131:75,56:75:2587:56:2004:-141.152,0,-192.094	1/1:20:0,20:0:0:20:716:-64.7576,-6.0206,0	1/1:83:0,83:0:0:83:2957:-265.895,-24.9855,0	1/1:104:0,104:0:0:104:3715:-333.206,-31.3071,0	1/1:205:0,205:0:0:205:7342:-660.444,-61.7112,0	1/1:154:0,154:0:0:154:5478:-492.794,-46.3586,0	0/1:134:78,56:78:2728:56:2006:-139.897,0,-204.175	1/1:125:0,125:0:0:125:4464:-401.607,-37.6288,0	0/1:14:5,9:5:176:9:324:-25.2745,0,-11.8508	1/1:119:0,119:0:0:119:4264:-383.837,-35.8226,0	0/1:142:80,62:80:2812:62:2224:-157.593,0,-208.742	1/1:200:1,199:1:36:199:7108:-635.824,-56.6575,0	0/1:152:78,74:78:2774:74:2652:-192.915,0,-202.209	0/1:105:41,64:41:1378:64:2296:-175.089,0,-91.9286	1/1:144:0,144:0:0:144:5147:-463.036,-43.3483,0	0/1:235:122,113:122:4287:113:4056:-294.187,0,-312.44	0/1:54:32,22:32:1117:22:788:-54.9542,0,-84.1017	1/1:137:0,136:0:0:136:4855:-436.358,-40.9401,0	1/1:128:0,128:0:0:128:4558:-409.027,-38.5318,0	1/1:53:1,52:1:36:52:1863:-164.033,-12.3563,0	0/1:168:90,78:90:3148:78:2800:-201.074,0,-228.734	0/1:131:92,39:92:3256:39:1404:-87.0856,0,-250.949	1/1:73:0,73:0:0:73:2620:-235.928,-21.9752,0	1/1:241:0,241:0:0:241:8604:-773.928,-72.5482,0
chr05	25551933	.	TTGCT	TTGAT,GTGAT	276606	PASS	AB=0.469859,0.52615;ABP=40.5785,31.2887;AC=141,47;AF=0.75,0.25;AN=188;AO=7590,2530;CIGAR=3M1X1M,1X2M1X1M;DP=10169;DPB=10170.2;DPRA=0,1.004;EPP=58.3986,70.3002;EPPR=5.18177;GTI=1;LEN=1,5;MEANALT=2.03191,2.38596;MQM=57.944,51.8115;MQMR=60;NS=94;NUMALT=2;ODDS=6.62547;PAIRED=0,0;PAIREDR=0;PAO=0,3;PQA=0,99;PQR=0;PRO=0;QA=270711,88707;QR=30;RO=1;RPL=7580,2529;RPP=16397.7,5488.15;RPPR=5.18177;RPR=10,1;RUN=1,1;SAF=3565,1124;SAP=63.5483,71.2649;SAR=4025,1406;SRF=1;SRP=5.18177;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:80:0,42,38:0:0:42,38:1500,1314:-228.683,-106.536,-93.893,-122.497,0,-111.058	1/1:134:0,134,0:0:0:134,0:4808,0:-432.392,-40.338,0,-432.392,-40.338,-432.392	1/2:140:0,70,69:0:0:70,69:2510,2407:-398.617,-194.337,-173.265,-204.294,0,-183.523	1/1:181:0,180,1:0:0:180,1:6404,36:-575.644,-54.1854,0,-572.752,-50.9379,-572.451	1/1:84:0,84,0:0:0:84,0:2987,0:-268.669,-25.2865,0,-268.669,-25.2865,-268.669	1/1:63:0,63,0:0:0:63,0:2260,0:-203.283,-18.9649,0,-203.283,-18.9649,-203.283	1/2:151:0,74,77:0:0:74,77:2620,2694:-431.604,-218.438,-196.162,-213.517,0,-190.337	1/1:175:0,174,1:0:0:174,1:6214,35:-557.906,-52.3792,0,-555.061,-49.1846,-554.76	1/2:116:0,75,41:0:0:75,41:2675,1456:-335.831,-117.89,-95.3124,-218.295,0,-205.952	1/1:92:0,91,0:0:0:91,0:3236,0:-291.038,-27.3937,0,-291.038,-27.3937,-291.038	1/1:101:0,98,0:0:0:98,0:3497,0:-314.175,-29.5009,0,-314.175,-29.5009,-314.175	1/1:156:0,155,0:0:0:155,0:5538,0:-497.771,-46.6597,0,-497.771,-46.6597,-497.771	1/2:112:0,60,52:0:0:60,52:2131,1821:-320.368,-146.976,-128.914,-173.743,0,-158.089	1/2:117:0,64,53:0:0:64,53:2288,1885:-339.756,-153.259,-133.993,-186.852,0,-170.898	1/2:141:0,60,80:0:0:60,80:2160,2842:-405.83,-229.652,-211.59,-176.179,0,-152.097	1/1:124:0,123,0:0:0:123,0:4399,0:-395.127,-37.0267,0,-395.127,-37.0267,-395.127	1/2:87:0,42,45:0:0:42,45:1501,1580:-250.473,-128.195,-115.552,-122.631,0,-109.085	1/1:77:0,77,0:0:0:77,0:2768,0:-249.257,-23.1793,0,-249.257,-23.1793,-249.257	1/1:67:0,66,0:0:0:66,0:2368,0:-212.384,-19.868,0,-212.384,-19.868,-212.384	1/2:112:0,49,63:0:0:49,63:1735,2194:-318.508,-177.535,-162.784,-141.323,0,-122.358	1/2:164:0,79,83:0:0:79,83:2789,2924:-463.702,-236.652,-212.87,-227.154,0,-202.168	1/2:40:0,11,29:0:0:11,29:396,1035:-116.246,-83.9376,-80.6262,-32.6668,0,-23.937	1/2:109:0,47,60:0:0:47,60:1680,2092:-305.418,-168.497,-154.348,-137.023,0,-118.961	1/1:112:0,103,9:0:0:103,9:3687,319:-331.441,-31.0061,0,-305.735,-4.94876,-303.025	1/1:90:0,89,0:0:0:89,0:3166,0:-284.428,-26.7917,0,-284.428,-26.7917,-284.428	1/1:269:0,268,1:0:0:268,1:9584,36:-861.636,-80.676,0,-858.698,-77.3788,-858.397	1/1:242:0,239,0:0:0:239,0:8509,0:-765.001,-71.9462,0,-765.001,-71.9462,-765.001	1/2:76:0,49,26:0:0:49,26:1741,925:-216.529,-74.7718,-60.0214,-141.756,0,-133.93	1/2:223:0,109,114:0:0:109,114:3870,3995:-638.061,-323.217,-290.405,-315.195,0,-280.878	1/1:115:0,110,4:0:0:110,4:3921,141:-352.277,-33.1133,0,-340.911,-21.6357,-339.707	1/1:104:0,103,0:0:0:103,0:3668,0:-329.546,-31.0061,0,-329.546,-31.0061,-329.546	1/2:6:0,3,3:0:0:3,3:104,101:-16.8961,-8.5108,-7.60771,-8.72537,0,-7.82228	1/1:15:0,15,0:0:0:15,0:536,0:-48.3789,-4.51545,0,-48.3789,-4.51545,-48.3789	1/1:13:0,13,0:0:0:13,0:468,0:-42.3247,-3.91339,0,-42.3247,-3.91339,-42.3247	1/1:17:0,13,1:0:0:13,1:451,36:-40.5371,-3.91339,0,-37.635,-1.01166,-37.3339	1/1:23:0,23,0:0:0:23,0:816,0:-73.7141,-6.92369,0,-73.7141,-6.92369,-73.7141	1/1:336:0,332,0:0:0:332,0:11851,0:-1065.33,-99.942,0,-1065.33,-99.942,-1065.33	1/1:65:0,65,0:0:0:65,0:2285,0:-205.651,-19.567,0,-205.651,-19.567,-205.651	1/1:91:0,91,0:0:0:91,0:3251,0:-292.441,-27.3937,0,-292.441,-27.3937,-292.441	1/2:4:0,1,3:0:0:1,3:36,108:-12.0143,-9.0776,-8.77657,-3.29553,0,-2.39244	1/2:117:0,73,44:0:0:73,44:2599,1566:-338.681,-126.904,-104.928,-212.131,0,-198.886	1/1:54:0,53,0:0:0:53,0:1908,0:-171.523,-15.9546,0,-171.523,-15.9546,-171.523	1/2:163:0,69,94:0:0:69,94:2463,3285:-466.549,-266.092,-245.321,-200.81,0,-172.513	1/2:138:0,69,69:0:0:69,69:2459,2432:-397.59,-197.397,-176.626,-200.547,0,-179.776	1/1:108:0,108,0:0:0:108,0:3848,0:-346.116,-32.5112,0,-346.116,-32.5112,-346.116	1/1:93:0,93,0:0:0:93,0:3328,0:-299.519,-27.9958,0,-299.519,-27.9958,-299.519	1/2:102:0,54,48:0:0:54,48:1927,1684:-293.052,-136.091,-119.836,-157.312,0,-142.863	1/2:165:0,93,72:0:0:93,72:3301,2521:-472.799,-204.163,-176.167,-268.987,0,-247.313	1/2:70:0,20,50:0:0:20,50:711,1755:-200.353,-142.478,-136.457,-58.2288,0,-43.1773	1/1:137:0,137,0:0:0:137,0:4888,0:-439.882,-41.2411,0,-439.882,-41.2411,-439.882	1/1:104:0,104,0:0:0:104,0:3719,0:-334.806,-31.3071,0,-334.806,-31.3071,-334.806	1/1:127:1,121,5:1:30:121,5:4299,179:-383.789,-34.0352,0,-369.619,-21.9077,-370.512	1/2:94:0,41,53:0:0:41,53:1451,1869:-269.999,-151.897,-139.555,-118.454,0,-102.499	1/1:43:0,43,0:0:0:43,0:1532,0:-137.795,-12.9443,0,-137.795,-12.9443,-137.795	1/2:22:0,7,15:0:0:7,15:252,523:-63.1201,-42.5572,-40.45,-20.9184,0,-16.4029	1/2:109:0,49,58:0:0:49,58:1725,2034:-304.34,-164.064,-149.314,-140.27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chr05	25692272	.	G	A	58845.6	PASS	AB=0.552327;ABP=148.678;AC=48;AF=0.255319;AN=188;AO=3440;CIGAR=1X;DP=13630;DPB=13630;DPRA=1.39018;EPP=7429.51;EPPR=21864;GTI=1;LEN=1;MEANALT=1.01667;MQM=59.3933;MQMR=59.9204;NS=94;NUMALT=1;ODDS=9.3385;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122121;QR=364067;RO=10187;RPL=0;RPP=7472.88;RPPR=22037;RPR=3440;RUN=1;SAF=3435;SAP=7429.51;SAR=5;SRF=10167;SRP=21950.4;SRR=20;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:38,27:38:1355:27:947:-65.934,0,-102.683	0/0:262:260,2:260:9268:2:68:0,-72.4121,-827.613	0/1:100:42,58:42:1508:58:2056:-154.905,0,-105.912	0/0:187:186,1:186:6638:1:36:0,-52.6943,-593.841	0/0:150:149,1:149:5340:1:21:0,-43.0546,-478.562	0/0:61:61,0:61:2196:0:0:0,-18.3628,-197.905	0/1:182:72,110:72:2580:110:3889:-295.38,0,-176.885	0/0:357:354,3:354:12665:3:108:0,-97.3925,-1129.13	0/1:161:71,90:71:2529:90:3196:-239.224,0,-179.392	0/0:161:161,0:161:5746:0:0:0,-48.4658,-517.254	0/0:73:73,0:73:2599:0:0:0,-21.9752,-234.159	0/0:95:95,0:95:3389:0:0:0,-28.5978,-305.216	0/1:106:55,51:55:1976:51:1817:-131.821,0,-146.202	0/1:109:57,52:57:2028:52:1856:-134.468,0,-149.98	0/1:70:35,35:35:1241:35:1241:-90.9204,0,-90.9204	0/0:63:63,0:63:2268:0:0:0,-18.9649,-204.382	0/1:118:59,59:59:2103:59:2120:-155.33,0,-153.961	0/0:116:116,0:116:4172:0:0:0,-34.9195,-375.66	0/0:56:56,0:56:1996:0:0:0,-16.8577,-179.914	0/1:384:171,213:171:6075:213:7535:-562.569,0,-431.212	0/1:333:147,186:147:5245:186:6568:-490.094,0,-371.941	0/1:120:33,87:33:1175:87:3074:-240.703,0,-69.9301	0/1:77:37,40:37:1332:40:1424:-105.271,0,-97.0031	0/0:152:140,12:140:4999:12:425:0,-7.21635,-411.518	0/0:105:105,0:105:3737:0:0:0,-31.6081,-336.531	0/0:482:481,1:481:17222:1:36:0,-141.498,-1545.92	0/0:337:336,1:336:12024:1:32:0,-98.2478,-1078.81	0/1:62:30,32:30:1076:32:1152:-85.3263,0,-78.4844	0/1:368:172,196:172:6165:196:6958:-514.959,0,-444.16	0/0:354:340,13:340:12139:13:453:0,-65.523,-1051.23	0/0:115:115,0:115:4111:0:0:0,-34.6184,-370.172	0/1:9:3,6:3:108:6:212:-16.7146,0,-7.3659	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:11:11,0:11:388:0:0:0,-3.31133,-35.2574	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.8895	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:273:272,0:272:9751:0:0:0,-81.8802,-877.157	0/0:412:412,0:412:14745:0:0:0,-124.024,-1326.77	0/0:105:105,0:105:3763:0:0:0,-31.6081,-338.868	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:207:99,108:99:3548:108:3830:-281.391,0,-257.215	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:111:35,76:35:1251:76:2657:-205.873,0,-79.4799	0/1:114:55,59:55:1972:59:2116:-156.387,0,-143.437	0/0:106:106,0:106:3779:0:0:0,-31.9092,-340.31	0/0:100:100,0:100:3580:0:0:0,-30.103,-321.977	0/1:179:84,95:84:3016:95:3377:-249.998,0,-217.764	0/0:358:355,3:355:12695:3:93:0,-99.092,-1133.6	0/1:173:66,107:66:2338:107:3808:-290.714,0,-158.596	0/0:263:262,1:262:9404:1:36:0,-75.5726,-842.701	0/0:182:182,0:182:6475:0:0:0,-54.7875,-582.812	0/1:19:5,14:5:180:14:496:-39.2514,0,-10.8325	0/1:203:64,139:64:2288:139:4966:-385.403,0,-145.064	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.579	0/1:34:13,21:13:468:21:756:-58.1194,0,-32.2246	0/1:191:87,104:87:3120:104:3678:-273.58,0,-223.529	0/1:40:23,17:23:824:17:604:-42.6209,0,-62.4421	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/1:30:5,25:5:180:25:892:-71.5214,0,-7.52116	0/0:162:162,0:162:5807:0:0:0,-48.7669,-522.74	0/1:123:50,73:50:1783:73:2604:-197.535,0,-123.725	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	0/1:299:139,160:139:4977:160:5659:-419.319,0,-358.065	0/1:329:164,165:164:5869:165:5870:-428.356,0,-429.227	0/1:120:44,76:44:1563:76:2681:-205.245,0,-104.835	0/1:89:44,45:44:1572:45:1600:-117.494,0,-114.978	0/0:236:231,5:231:8219:5:180:0,-54.491,-722.901	0/1:226:73,153:73:2593:153:5450:-422.493,0,-165.554	0/1:25:14,11:14:500:11:396:-28.457,0,-37.8104	0/1:103:51,52:51:1832:52:1859:-136.51,0,-134.133	0/1:135:59,76:59:2095:76:2724:-204.748,0,-148.18	0/0:41:41,0:41:1460:0:0:0,-12.3422,-131.696	0/0:81:80,0:80:2837:0:0:0,-24.0824,-255.179	0/0:121:121,0:121:4333:0:0:0,-36.4246,-390.143	0/0:353:353,0:353:12593:0:0:0,-106.264,-1133.19	0/0:212:212,0:212:7583:0:0:0,-63.8184,-682.502	0/1:201:109,92:109:3903:92:3267:-233.638,0,-290.937	0/0:225:218,7:218:7790:7:252:0,-44.7902,-678.179	0/1:14:7,7:7:248:7:252:-18.8145,0,-18.4498	0/0:191:188,3:188:6704:3:104:0,-47.7958,-593.598	0/1:191:102,89:102:3641:89:3136:-224.645,0,-270.371	0/0:217:217,0:217:7760:0:0:0,-65.3235,-698.427	0/1:147:67,80:67:2385:80:2819:-209.593,0,-170.654	0/1:74:45,29:45:1612:29:1040:-71.4815,0,-123.094	0/0:138:138,0:138:4924:0:0:0,-41.5421,-443.304	0/1:206:101,105:101:3604:105:3760:-275.565,0,-262.554	0/1:54:23,31:23:824:31:1089:-82.0617,0,-58.2277	0/0:93:93,0:93:3324:0:0:0,-27.9958,-299.378	0/0:77:77,0:77:2748:0:0:0,-23.1793,-247.373	0/0:48:48,0:48:1682:0:0:0,-14.4494,-151.662	0/1:104:50,54:50:1780:54:1940:-143.255,0,-129.171	0/1:104:36,68:36:1288:68:2402:-185.101,0,-84.9165	0/0:113:113,0:113:4044:0:0:0,-34.0164,-364.148	0/0:141:141,0:141:5044:0:0:0,-42.4452,-454.103
chr05	25709502	.	C	T	211558	PASS	AB=0.521601;ABP=27.308;AC=141;AF=0.75;AN=188;AO=9988;CIGAR=1X;DP=12875;DPB=12875;DPRA=0;EPP=21691.7;EPPR=6263.37;GTI=2;LEN=1;MEANALT=1.03191;MQM=54.1608;MQMR=59.7052;NS=94;NUMALT=1;ODDS=2.65103;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=357334;QR=102849;RO=2883;RPL=0;RPP=21691.7;RPPR=6263.37;RPR=9988;RUN=1;SAF=9988;SAP=21691.7;SAR=0;SRF=2883;SRP=6263.37;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:30,29:30:1080:29:1040:-76.0595,0,-79.7458	1/1:220:0,220:0:0:220:7870:-707.256,-66.2266,0	0/1:201:104,97:104:3708:97:3448:-249.511,0,-273.413	1/1:308:0,308:0:0:308:11009:-988.315,-92.7172,0	1/1:83:1,82:1:36:82:2922:-259.384,-21.3872,0	1/1:54:0,54:0:0:54:1940:-174.512,-16.2556,0	0/1:102:38,64:38:1364:64:2280:-174.254,0,-91.8507	1/1:234:1,233:1:36:233:8329:-743.931,-66.8427,0	0/1:156:75,81:75:2688:81:2896:-213.52,0,-195.198	1/1:131:0,130:0:0:130:4668:-418.995,-39.1339,0	1/1:87:2,85:2:72:85:3053:-267.964,-19.8694,0	1/1:75:0,75:0:0:75:2696:-242.201,-22.5773,0	0/1:78:40,38:40:1440:38:1368:-99.7991,0,-106.417	0/1:93:34,59:34:1195:59:2124:-162.974,0,-79.8577	0/1:83:38,45:38:1364:45:1605:-119.254,0,-98.0629	1/1:74:0,74:0:0:74:2627:-236.499,-22.2762,0	0/1:76:37,39:37:1332:39:1392:-102.572,0,-97.2974	1/1:82:1,81:1:36:81:2904:-258.006,-21.4383,0	1/1:57:0,57:0:0:57:2048:-184.322,-17.1587,0	0/1:328:157,171:157:5603:171:6113:-450.059,0,-405.611	0/1:321:113,208:113:4024:208:7415:-569.854,0,-265.719	0/1:193:139,54:139:4966:54:1932:-115.417,0,-388.957	0/1:163:68,95:68:2411:95:3385:-254.914,0,-168.153	0/1:162:19,143:19:667:143:5117:-411.496,0,-11.4287	1/1:128:1,127:1:36:127:4559:-406.481,-34.9336,0	1/1:309:1,308:1:36:308:11013:-983.185,-90.0375,0	1/1:275:0,275:0:0:275:9848:-885.738,-82.7833,0	0/1:45:22,23:22:780:23:828:-61.2601,0,-56.9676	0/1:407:195,212:195:6972:212:7574:-557.021,0,-504.993	1/1:194:6,188:6:216:188:6740:-586.287,-38.6093,0	1/1:249:2,247:2:72:247:8815:-784.138,-68.6363,0	0/1:8:6,2:6:216:2:72:-4.42657,0,-17.3814	1/1:28:0,28:0:0:28:1008:-91.0118,-8.42884,0	1/1:5:0,5:0:0:5:180:-16.535,-1.50515,0	1/1:10:0,10:0:0:10:356:-32.3495,-3.0103,0	1/1:11:0,11:0:0:11:390:-34.7074,-3.31133,0	1/1:215:0,215:0:0:215:7707:-690.943,-64.7215,0	1/1:322:0,322:0:0:322:11536:-1035.78,-96.9317,0	1/1:65:0,65:0:0:65:2327:-209.031,-19.567,0	1/1:7:0,7:0:0:7:248:-22.6583,-2.10721,0	0/1:137:51,86:51:1787:86:3063:-234.496,0,-119.867	1/1:37:0,37:0:0:37:1315:-118.51,-11.1381,0	0/1:154:82,72:82:2931:72:2584:-186.253,0,-217.615	0/1:82:42,40:42:1512:40:1436:-104.453,0,-111.678	1/1:90:0,90:0:0:90:3224:-289.295,-27.0927,0	1/1:172:0,172:0:0:172:6154:-551.602,-51.7772,0	0/1:190:100,89:100:3562:89:3192:-229.873,0,-263.512	1/1:202:0,202:0:0:202:7213:-647.104,-60.8081,0	0/1:154:76,78:76:2692:78:2757:-200.683,0,-196.121	1/1:217:0,217:0:0:217:7800:-699.648,-65.3235,0	1/1:285:0,285:0:0:285:10209:-915.432,-85.7936,0	0/1:14:3,11:3:108:11:396:-31.6998,0,-5.86075	0/1:178:98,80:98:3500:80:2872:-204.365,0,-261.602	1/1:43:0,43:0:0:43:1529:-137.334,-12.9443,0	0/1:11:4,7:4:140:7:252:-19.2012,0,-9.63325	0/1:184:86,96:86:3084:96:3431:-253.699,0,-222.639	0/1:28:14,14:14:504:14:485:-35.4722,0,-37.263	0/1:8:6,2:6:216:2:68:-4.03826,0,-17.3823	0/1:29:13,16:13:464:16:576:-43.3139,0,-33.3676	1/1:161:0,161:0:0:161:5755:-517.536,-48.4658,0	0/1:150:68,82:68:2411:82:2944:-219.416,0,-172.08	0/1:13:8,5:8:284:5:180:-12.4196,0,-21.99	0/1:270:123,147:123:4403:147:5259:-389.954,0,-315.148	0/1:322:161,161:161:5743:161:5771:-420.749,0,-419.927	0/1:86:40,46:40:1436:46:1656:-123.399,0,-103.649	0/1:148:77,71:77:2746:71:2548:-184.599,0,-202.823	1/1:356:1,355:1:36:355:12630:-1129.19,-103.568,0	0/1:177:104,73:104:3709:73:2605:-180.841,0,-280.711	0/1:31:19,12:19:680:12:428:-29.4472,0,-52.1971	0/1:136:50,86:50:1779:86:3071:-235.355,0,-119.445	0/1:86:47,39:47:1671:39:1392:-98.9481,0,-124.772	1/1:20:0,20:0:0:20:716:-64.6589,-6.0206,0	1/1:125:0,125:0:0:125:4476:-401.973,-37.6288,0	1/1:96:0,96:0:0:96:3452:-309.939,-28.8989,0	1/1:291:0,291:0:0:291:10356:-930.17,-87.5997,0	1/1:221:2,219:2:72:219:7860:-698.66,-59.6909,0	0/1:182:90,92:90:3207:92:3280:-239.004,0,-234.049	1/1:163:0,163:0:0:163:5827:-523.707,-49.0679,0	0/1:7:6,1:6:212:1:23:-0.0739823,0,-17.3176	1/1:162:0,162:0:0:162:5820:-523.542,-48.7669,0	0/1:164:92,72:92:3267:72:2576:-182.343,0,-244.866	1/1:350:0,350:0:0:350:12545:-1124.38,-105.361,0	0/1:101:48,53:48:1720:53:1900:-140.398,0,-124.649	0/1:93:54,39:54:1913:39:1396:-97.7201,0,-144.443	1/1:114:0,114:0:0:114:4092:-367.165,-34.3174,0	0/1:157:63,94:63:2246:94:3376:-255.738,0,-155.14	0/1:33:13,20:13:468:20:720:-55.1301,0,-32.5257	1/1:99:0,99:0:0:99:3539:-318.051,-29.802,0	1/1:88:0,88:0:0:88:3156:-283.959,-26.4906,0	1/1:57:0,57:0:0:57:2036:-183.316,-17.1587,0	0/1:104:55,49:55:1968:49:1752:-126.535,0,-146.085	0/1:91:57,34:57:2028:34:1220:-82.4888,0,-155.393	1/1:204:0,204:0:0:204:7316:-656.452,-61.4101,0	1/1:104:0,104:0:0:104:3723:-334.306,-31.3071,0
chr05	26461686	.	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chr05	26793256	.	T	C	123951	PASS	AB=0.509731;ABP=6.30652;AC=139;AF=0.739362;AN=188;AO=6050;CIGAR=1X;DP=8032;DPB=8032;DPRA=0;EPP=13131.7;EPPR=4293.84;GTI=2;LEN=1;MEANALT=1.04255;MQM=59.9426;MQMR=59.9803;NS=94;NUMALT=1;ODDS=1.2856;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212587;QR=70068;RO=1976;RPL=1;RPP=13131.7;RPPR=4293.84;RPR=6049;RUN=1;SAF=0;SAP=13140.4;SAR=6050;SRF=0;SRP=4293.84;SRR=1976;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:8,23:8:284:23:807:-63.6172,0,-16.5575	1/1:143:0,143:0:0:143:5069:-456.358,-43.0473,0	0/1:221:103,118:103:3671:118:4109:-303.472,0,-264.062	1/1:202:0,202:0:0:202:7126:-641.408,-60.8081,0	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:6:0,6:0:0:6:208:-19.0591,-1.80618,0	0/1:105:53,52:53:1888:52:1838:-134.09,0,-138.59	1/1:124:0,124:0:0:124:4404:-396.534,-37.3277,0	0/1:57:28,29:28:981:29:1016:-74.5879,0,-71.4317	1/1:110:0,110:0:0:110:3882:-349.577,-33.1133,0	1/1:47:0,47:0:0:47:1629:-146.896,-14.1484,0	1/1:54:0,54:0:0:54:1924:-173.437,-16.2556,0	0/1:49:29,20:29:1014:20:683:-47.0377,0,-76.8195	0/1:52:26,26:26:927:26:899:-65.5696,0,-68.0938	0/1:57:29,28:29:1020:28:933:-67.1162,0,-74.9534	1/1:47:0,47:0:0:47:1658:-149.506,-14.1484,0	0/1:69:33,36:33:1167:36:1272:-94.0118,0,-84.5653	1/1:51:0,51:0:0:51:1735:-156.426,-15.3525,0	1/1:30:0,30:0:0:30:1056:-95.3427,-9.0309,0	0/1:146:75,71:75:2664:71:2500:-181.301,0,-196.057	0/1:72:26,46:26:928:46:1627:-125.044,0,-62.1641	0/1:117:88,29:88:3127:29:1032:-57.973,0,-246.436	0/1:71:33,38:33:1180:38:1360:-101.325,0,-85.1349	0/1:126:13,113:13:453:113:3992:-321.543,0,-3.16984	1/1:69:0,69:0:0:69:2420:-218.036,-20.7711,0	1/1:248:0,245:0:0:245:8677:-780.568,-73.7524,0	1/1:192:0,191:0:0:191:6668:-599.847,-57.4967,0	0/1:34:18,16:18:632:16:549:-39.4974,0,-46.9717	0/1:282:136,145:136:4824:145:5108:-374.912,0,-349.368	1/1:114:1,113:1:36:113:3989:-355.595,-30.7191,0	1/1:74:0,74:0:0:74:2614:-235.508,-22.2762,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	1/1:19:1,18:1:36:18:636:-53.9698,-2.1213,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:22:0,22:0:0:22:766:-69.2579,-6.62266,0	0/1:193:99,94:99:3516:94:3293:-238.477,0,-258.554	1/1:185:0,185:0:0:185:6538:-588.502,-55.6906,0	1/1:62:0,62:0:0:62:2140:-192.866,-18.6639,0	0/1:12:4,8:4:144:8:271:-21.1071,0,-9.70126	0/1:131:59,72:59:2084:72:2567:-191.845,0,-148.393	1/1:30:1,29:1:36:29:1019:-88.4054,-5.43263,0	0/1:96:44,52:44:1567:52:1843:-137.246,0,-112.422	0/1:75:45,30:45:1570:30:1012:-68.8065,0,-119.012	1/1:57:0,57:0:0:57:1966:-177.212,-17.1587,0	1/1:39:0,39:0:0:39:1382:-124.677,-11.7402,0	0/1:132:53,79:53:1875:79:2791:-211.691,0,-129.292	1/1:173:4,169:4:144:169:5965:-523.65,-38.7646,0	0/1:159:91,67:91:3241:67:2381:-166.626,0,-243.988	1/1:140:0,140:0:0:140:4878:-439.179,-42.1442,0	1/1:176:1,175:1:36:175:6144:-549.469,-49.383,0	0/1:9:3,6:3:108:6:212:-16.7155,0,-7.3659	0/1:111:56,55:56:1993:55:1933:-140.83,0,-146.228	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	0/1:20:10,10:10:352:10:351:-25.9061,0,-25.9976	1/1:119:0,119:0:0:119:4175:-375.933,-35.8226,0	0/1:40:28,12:28:1000:12:424:-26.4552,0,-78.2742	0/1:9:5,4:5:180:4:125:-8.84935,0,-13.8428	0/1:22:14,8:14:500:8:288:-19.6447,0,-38.7135	1/1:60:0,60:0:0:60:2133:-192.167,-18.0618,0	0/1:103:51,52:51:1816:52:1818:-132.894,0,-132.693	0/1:18:4,14:4:144:14:484:-38.4387,0,-7.89508	0/1:163:78,85:78:2771:85:3036:-224.402,0,-200.564	0/1:168:91,77:91:3242:77:2692:-191.95,0,-241.428	0/1:61:26,35:26:936:35:1252:-94.6222,0,-66.1966	0/1:77:33,44:33:1171:44:1556:-117.15,0,-82.5174	1/1:138:0,138:0:0:138:4895:-440.52,-41.5421,0	1/1:131:1,130:1:36:130:4582:-408.324,-35.8367,0	0/1:30:17,13:17:596:13:451:-31.8889,0,-44.9369	0/1:74:33,41:33:1158:41:1425:-106.267,0,-82.2488	0/1:68:33,35:33:1172:35:1164:-84.582,0,-85.3175	1/1:32:0,32:0:0:32:1148:-103.63,-9.63296,0	0/1:69:28,41:28:1004:41:1442:-109.303,0,-69.9048	1/1:54:0,54:0:0:54:1901:-171.366,-16.2556,0	1/1:39:0,39:0:0:39:1362:-122.872,-11.7402,0	1/1:197:0,197:0:0:197:6895:-620.623,-59.3029,0	0/1:49:31,18:31:1084:18:636:-42.8176,0,-83.1184	1/1:112:2,110:2:72:110:3858:-340.572,-26.8786,0	0/1:12:2,10:2:72:10:351:-28.3143,0,-3.22436	1/1:130:1,129:1:36:129:4573:-408.141,-35.5356,0	0/1:93:42,51:42:1487:51:1775:-132.031,0,-106.128	1/1:218:0,218:0:0:218:7748:-697.356,-65.6245,0	0/1:95:53,42:53:1864:42:1438:-101.113,0,-139.439	0/1:41:22,19:22:772:19:649:-46.3857,0,-57.459	1/1:77:0,77:0:0:77:2637:-237.571,-23.1793,0	0/1:120:57,63:57:2028:63:2195:-161.693,0,-146.669	0/1:38:19,19:19:672:19:668:-49.0065,0,-49.3677	1/1:69:0,69:0:0:69:2421:-218.11,-20.7711,0	0/1:84:45,39:45:1579:39:1348:-96.3296,0,-117.113	1/1:37:0,37:0:0:37:1274:-114.959,-11.1381,0	0/1:90:51,39:51:1799:39:1354:-95.064,0,-135.099	0/1:52:34,18:34:1199:18:636:-41.9145,0,-92.5612	1/1:64:0,64:0:0:64:2275:-205.012,-19.2659,0	1/1:77:1,76:1:36:76:2595:-230.194,-19.581,0
chr05	26930471	.	CGATT	GGATG,CGATG	422075	PASS	AB=0.508534,0.486322;ABP=8.42147,16.9104;AC=137,51;AF=0.728723,0.271277;AN=188;AO=13003,4193;CIGAR=1X3M1X,4M1X;DP=17288;DPB=17288.6;DPRA=0,1.04874;EPP=28238.7,9107.99;EPPR=20.3821;GTI=0;LEN=5,1;MEANALT=2.52128,2.79104;MQM=43.1177,50.891;MQMR=59.5;NS=94;NUMALT=2;ODDS=3.07096;PAIRED=0,0;PAIREDR=0;PAO=3.5,0.5;PQA=90,18;PQR=0;PRO=0;QA=447289,148789;QR=252;RO=8;RPL=7043,2136;RPP=198.88,6.24239;RPPR=4.09604;RPR=5960,2057;RUN=1,1;SAF=7043,2136;SAP=198.88,6.24239;SAR=5960,2057;SRF=3;SRP=4.09604;SRR=5;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:87:0,48,39:0:0:48,39:1651,1400:-232.45,-113.122,-98.6726,-119.662,0,-107.922	1/1:241:0,239,0:0:0:239,0:8144,0:-692.913,-71.9462,0,-692.913,-71.9462,-692.913	1/2:261:0,146,114:0:0:146,114:5094,4075:-703.192,-328.513,-284.562,-374.796,0,-340.479	1/1:356:0,356,0:0:0:356,0:12358,0:-992.761,-107.167,0,-992.761,-107.167,-992.761	1/2:42:0,24,18:0:0:24,18:827,636:-116.442,-51.2861,-44.0614,-65.498,0,-60.0794	1/2:71:0,23,47:0:0:23,47:791,1684:-197.598,-135.455,-128.531,-62.2289,0,-48.0805	1/2:224:0,120,102:0:0:120,102:4196,3634:-591.205,-293.337,-257.213,-297.945,0,-267.24	1/1:247:0,246,1:0:0:246,1:8474,36:-721.099,-74.0534,0,-718.162,-70.7561,-717.861	1/2:177:0,102,74:0:0:102,74:3574,2637:-472.257,-212.463,-181.758,-259.871,0,-237.594	1/1:168:0,167,0:0:0:167,0:5769,0:-486.442,-50.272,0,-486.442,-50.272,-486.442	1/1:150:0,149,1:0:0:149,1:5159,32:-420.61,-44.8535,0,-418.05,-41.9757,-417.749	1/1:202:0,197,1:0:0:197,1:6718,27:-550.01,-59.3029,0,-547.886,-57.1828,-547.585	1/2:159:0,76,82:0:0:76,82:2636,2898:-428.735,-234.121,-211.243,-194.706,0,-170.021	1/2:217:0,92,125:0:0:92,125:3011,4389:-581.361,-355.138,-327.443,-226.548,0,-188.919	1/2:196:0,99,97:0:0:99,97:3418,3429:-526.433,-276.704,-246.902,-250.061,0,-220.861	1/1:152:0,150,0:0:0:150,0:5095,0:-422.195,-45.1545,0,-422.195,-45.1545,-422.195	1/2:378:0,195,180:0:0:195,180:6333,6330:-1013.68,-513.368,-454.667,-500.34,0,-446.154	1/1:125:0,125,0:0:0:125,0:4196,0:-357.135,-37.6288,0,-357.135,-37.6288,-357.135	1/2:87:0,47,39:0:0:47,39:1552,1404:-225.859,-113.779,-99.6306,-112.11,0,-100.37	1/2:218:0,96,122:0:0:96,122:3336,4316:-596.808,-348.276,-319.377,-248.866,0,-212.14	1/2:355:0,199,155:0:0:199,155:6707,5484:-937.001,-442.131,-382.226,-494.913,0,-448.254	1/2:132:0,35,97:0:0:35,97:1201,3464:-372.667,-280.987,-270.451,-92.0129,0,-62.813	1/2:158:0,89,69:0:0:89,69:3093,2453:-414.022,-197.557,-170.766,-216.795,0,-196.024	1/1:230:0,224,5:0:0:224,5:7708,156:-639.482,-67.4307,0,-627.049,-54.923,-625.544	1/1:129:0,128,0:0:0:128,0:4413,0:-356.434,-38.5318,0,-356.434,-38.5318,-356.434	1/1:477:0,471,2:0:0:471,2:16283,72:-1323.05,-141.785,0,-1317.18,-135.882,-1316.58	1/1:440:0,439,0:0:0:439,0:15256,0:-1231.1,-132.152,0,-1231.1,-132.152,-1231.1	1/2:74:0,43,31:0:0:43,31:1474,1108:-198.978,-89.9103,-76.966,-109.405,0,-100.074	1/2:396:2,170,224:2:65:170,224:5987,7983:-1067.39,-640.48,-594.55,-422.272,0,-360.087	1/1:243:0,236,5:0:0:236,5:8000,180:-663.36,-71.0431,0,-648.809,-56.424,-647.304	1/1:199:0,197,1:0:0:197,1:6825,36:-568.259,-59.3029,0,-565.323,-56.3678,-565.022	1/2:32:0,19,13:0:0:19,13:683,455:-83.5059,-36.9401,-31.2206,-46.8956,0,-42.9822	1/1:33:0,33,0:0:0:33,0:1132,0:-93.8576,-9.93399,0,-93.8576,-9.93399,-93.8576	1/1:14:0,14,0:0:0:14,0:490,0:-42.2696,-4.21442,0,-42.2696,-4.21442,-42.2696	1/1:40:0,40,0:0:0:40,0:1371,0:-112.177,-12.0412,0,-112.177,-12.0412,-112.177	1/1:38:0,38,0:0:0:38,0:1331,0:-106.219,-11.4391,0,-106.219,-11.4391,-106.219	1/2:408:0,197,209:0:0:197,209:6694,7393:-1085.04,-598.244,-538.941,-486.907,0,-423.992	1/1:217:0,217,0:0:0:217,0:7464,0:-622.687,-65.3235,0,-622.687,-65.3235,-622.687	1/1:115:0,114,1:0:0:114,1:3901,36:-325.123,-34.3174,0,-322.185,-31.0202,-321.884	1/2:5:0,2,3:0:0:2,3:72,108:-14.4267,-9.12245,-8.52039,-5.64471,0,-4.74162	1/2:230:0,123,107:0:0:123,107:4168,3826:-626.3,-309.433,-272.407,-317.205,0,-284.995	1/1:67:0,66,0:0:0:66,0:2286,0:-185.597,-19.868,0,-185.597,-19.868,-185.597	1/2:310:0,157,151:0:0:157,151:5352,5372:-821.118,-430.339,-383.077,-390.845,0,-345.389	1/2:151:0,68,83:0:0:68,83:2357,2914:-408.337,-234.308,-213.838,-174.36,0,-149.375	1/1:120:0,120,0:0:0:120,0:4092,0:-335.872,-36.1236,0,-335.872,-36.1236,-335.872	1/1:202:0,199,0:0:0:199,0:6886,0:-559.237,-59.905,0,-559.237,-59.905,-559.237	1/2:178:0,85,93:0:0:85,93:2945,3322:-486.345,-269.048,-243.46,-217.633,0,-189.637	1/1:243:0,241,1:0:0:241,1:8368,36:-680.656,-72.5482,0,-677.721,-69.5941,-677.42	1/2:172:0,100,69:0:0:100,69:3463,2472:-454.967,-199.443,-169.34,-255.562,0,-234.791	1/1:330:0,327,0:0:0:327,0:11192,0:-943.412,-98.4368,0,-943.412,-98.4368,-943.412	1/1:299:0,295,2:0:0:295,2:10178,72:-833.214,-88.8039,0,-827.367,-82.9414,-826.765	1/2:25:0,15,10:0:0:15,10:533,360:-69.2937,-29.6269,-25.1115,-40.013,0,-37.0027	1/2:183:2,82,97:2:58:82,97:2825,3445:-480.428,-273.213,-253.143,-203.236,0,-178.652	1/1:198:0,198,0:0:0:198,0:6779,0:-584.637,-59.6039,0,-584.637,-59.6039,-584.637	1/2:26:0,10,16:0:0:10,16:346,576:-74.848,-4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chr05	26950561	.	CA	CG,TG	663749	PASS	AB=0.550538,0.447158;ABP=147.43,160.899;AC=146,42;AF=0.776596,0.223404;AN=188;AO=26971,3047;CIGAR=1M1X,2X;DP=30077;DPB=30079;DPRA=0,1.34041;EPP=58569.8,6619.49;EPPR=18.2106;GTI=6;LEN=1,2;MEANALT=2.15957,2.47826;MQM=59.9904,59.6009;MQMR=60;NS=94;NUMALT=2;ODDS=9.64047;PAIRED=0,0;PAIREDR=0;PAO=2,2;PQA=66,66;PQR=0;PRO=0;QA=963031,108071;QR=237;RO=7;RPL=0,0;RPP=58569.8,6619.49;RPPR=18.2106;RPR=26971,3047;RUN=1,1;SAF=26971,3047;SAP=58569.8,6619.49;SAR=0,0;SRF=7;SRP=18.2106;SRR=0;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:81:0,60,21:0:0:60,21:2152,756:-237.572,-62.0456,-43.9838,-175.885,0,-169.564	1/1:264:0,261,3:0:0:261,3:9325,108:-838.857,-78.5688,0,-830.044,-69.3968,-829.141	1/2:129:0,68,61:0:0:68,61:2405,2111:-367.758,-171.872,-151.402,-196.236,0,-177.873	1/1:203:0,203,0:0:0:203,0:7234,0:-651.114,-61.1091,0,-651.114,-61.1091,-651.114	1/2:55:0,36,18:0:0:36,18:1292,637:-157.266,-51.8745,-41.0375,-105.387,0,-99.9683	1/2:108:0,69,39:0:0:69,39:2458,1366:-311.83,-111.483,-90.7118,-200.7,0,-188.96	1/2:195:0,87,106:0:0:87,106:3112,3742:-558.504,-304.742,-278.552,-253.797,0,-221.888	1/1:205:0,203,2:0:0:203,2:7279,72:-654.799,-61.1091,0,-648.925,-54.8744,-648.323	1/2:178:0,97,81:0:0:97,81:3472,2860:-516.023,-232.886,-203.686,-283.492,0,-259.108	1/1:162:0,162,0:0:0:162,0:5736,0:-516.356,-48.7669,0,-516.356,-48.7669,-516.356	1/1:572:1,568,1:1:25:568,1:20329,36:-1826.55,-169.055,0,-1823.92,-168.029,-1825.57	1/1:63:0,63,0:0:0:63,0:2230,0:-200.963,-18.9649,0,-200.963,-18.9649,-200.963	1/2:67:0,38,29:0:0:38,29:1356,1033:-195.09,-84.5448,-73.1057,-110.901,0,-102.171	1/2:156:0,75,80:0:0:75,80:2686,2831:-449.731,-230.679,-208.102,-219.156,0,-195.074	1/2:73:0,39,34:0:0:39,34:1383,1213:-211.906,-99.2333,-87.4931,-113.028,0,-102.793	1/1:79:0,79,0:0:0:79,0:2821,0:-254.128,-23.7814,0,-254.128,-23.7814,-254.128	1/2:96:0,49,47:0:0:49,47:1748,1676:-279.408,-136.911,-122.16,-142.854,0,-128.705	1/1:86:0,86,0:0:0:86,0:3071,0:-276.618,-25.8886,0,-276.618,-25.8886,-276.618	1/2:210:0,168,41:0:0:168,41:6023,1426:-607.27,-116.018,-65.4447,-491.35,0,-479.007	1/2:209:0,84,125:0:0:84,125:2988,4450:-606.537,-363.028,-337.742,-243.864,0,-206.236	1/2:293:0,127,166:0:0:127,166:4522,5853:-845.415,-476.853,-438.622,-368.916,0,-318.945	1/2:101:0,37,64:0:0:37,64:1324,2287:-294.79,-186.824,-175.685,-108.324,0,-89.0581	1/2:83:0,44,39:0:0:44,39:1564,1402:-242.185,-114.736,-101.491,-127.806,0,-116.066	1/1:234:0,221,12:0:0:221,12:7885,432:-709.313,-66.5276,0,-674.064,-31.2786,-670.452	1/1:133:0,133,0:0:0:133,0:4760,0:-428.553,-40.037,0,-428.553,-40.037,-428.553	1/1:442:0,441,0:0:0:441,0:15724,0:-1414.55,-132.754,0,-1414.55,-132.754,-1414.55	1/1:355:0,355,0:0:0:355,0:12675,0:-1140.57,-106.866,0,-1140.57,-106.866,-1140.57	1/2:27:0,15,12:0:0:15,12:536,432:-79.3003,-35.5996,-31.0841,-44.0594,0,-40.447	1/2:273:0,140,133:0:0:140,133:5024,4739:-796.431,-386.628,-344.484,-410.161,0,-370.124	1/1:342:0,337,5:0:0:337,5:12042,180:-1083.27,-101.447,0,-1068.58,-86.4049,-1067.08	1/1:159:0,159,0:0:0:159,0:5685,0:-511.768,-47.8638,0,-511.768,-47.8638,-511.768	1/1:665:1,659,4:1:34:659,4:23537,142:-2114.29,-195.623,0,-2103.02,-186.805,-2104.57	1/1:1599:0,1596,2:0:0:1596,2:57010,72:-5127.7,-480.444,0,-5121.83,-474.569,-5121.23	1/1:1990:0,1987,2:0:0:1987,2:70996,72:-6386.66,-598.147,0,-6380.79,-592.272,-6380.19	1/1:2465:1,2456,1:1:36:2456,1:87496,36:-7867.73,-736.39,0,-7865.1,-736.39,-7867.73	1/1:1500:0,1497,1:0:0:1497,1:53433,36:-4806.71,-450.642,0,-4803.77,-447.715,-4803.47	1/2:224:0,93,131:0:0:93,131:3304,4649:-648.357,-379.13,-351.134,-269.582,0,-230.147	1/1:332:0,330,2:0:0:330,2:11751,72:-1057.1,-99.3399,0,-1051.22,-93.1052,-1050.62	1/1:721:0,721,0:0:0:721,0:25737,0:-2315.54,-217.043,0,-2315.54,-217.043,-2315.54	1/1:690:0,685,4:0:0:685,4:24383,144:-2193.46,-206.206,0,-2181.71,-194.373,-2180.51	1/2:148:0,60,88:0:0:60,88:2126,3125:-428.152,-254.962,-236.9,-173.545,0,-147.054	1/1:230:0,230,0:0:0:230,0:8244,0:-741.966,-69.2369,0,-741.966,-69.2369,-741.966	1/2:176:0,92,84:0:0:92,84:3281,3008:-512.93,-245.473,-217.779,-267.814,0,-242.528	1/2:90:0,41,49:0:0:41,49:1464,1734:-260.943,-141.585,-129.243,-119.714,0,-104.963	1/1:75:0,75,0:0:0:75,0:2672,0:-240.723,-22.5773,0,-240.723,-22.5773,-240.723	1/1:105:0,105,0:0:0:105,0:3725,0:-335.454,-31.6082,0,-335.454,-31.6082,-335.454	1/2:160:0,105,55:0:0:105,55:3751,1961:-466.013,-160.188,-128.58,-306.182,0,-289.625	1/1:208:0,202,5:0:0:202,5:7208,178:-648.419,-60.8081,0,-633.911,-46.3037,-632.406	1/2:134:0,63,69:0:0:63,69:2256,2435:-381.998,-198.015,-179.05,-183.978,0,-163.207	1/1:290:0,289,1:0:0:289,1:10343,36:-930.432,-86.9977,0,-927.494,-83.7004,-927.193	1/1:191:0,190,1:0:0:190,1:6796,36:-611.353,-57.1957,0,-608.415,-53.8985,-608.114	1/1:1202:0,1188,11:0:0:1188,11:42477,396:-3821.14,-357.624,0,-3788.83,-325.314,-3785.52	1/2:194:0,126,68:0:0:126,68:4512,2398:-563.473,-195.509,-157.579,-368.318,0,-347.848	1/1:112:0,112,0:0:0:112,0:4016,0:-361.628,-33.7154,0,-361.628,-33.7154,-361.628	1/1:603:0,597,5:0:0:597,5:21289,176:-191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chr05	26950594	.	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chr05	26963091	.	C	G	182705	PASS	AB=0.499181;ABP=3.04589;AC=137;AF=0.728723;AN=188;AO=8826;CIGAR=1X;DP=11909;DPB=11909;DPRA=0;EPP=19090.3;EPPR=6634.76;GTI=0;LEN=1;MEANALT=1.09574;MQM=59.8962;MQMR=59.9733;NS=94;NUMALT=1;ODDS=4.27922;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=312747;QR=109723;RO=3074;RPL=8817;RPP=19090.3;RPPR=6634.76;RPR=9;RUN=1;SAF=0;SAP=19168.4;SAR=8826;SRF=0;SRP=6678.12;SRR=3074;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:46:21,25:21:747:25:892:-66.7523,0,-53.7069	1/1:235:1,234:1:36:234:8300:-743.401,-67.1438,0	0/1:196:110,85:110:3940:85:3023:-213.24,0,-295.73	1/1:233:2,231:2:72:231:8176:-728.918,-63.3033,0	0/1:74:50,24:50:1783:24:844:-54.0027,0,-138.476	0/1:76:49,27:49:1760:27:955:-63.3866,0,-135.806	0/1:191:114,76:114:4042:76:2712:-186.822,0,-306.514	1/1:188:0,188:0:0:188:6696:-602.671,-56.5936,0	0/1:94:55,39:55:1963:39:1369:-95.2094,0,-148.648	1/1:118:0,117:0:0:117:4145:-372.859,-35.2205,0	1/1:170:0,170:0:0:170:6028:-542.628,-51.1751,0	1/1:122:0,122:0:0:122:4285:-385.827,-36.7257,0	0/1:106:60,46:60:2122:46:1626:-114.718,0,-159.339	0/1:169:80,89:80:2843:89:3139:-231.862,0,-205.235	0/1:87:53,34:53:1895:34:1191:-81.3047,0,-144.638	1/1:92:0,92:0:0:92:3271:-294.611,-27.6948,0	0/1:141:71,70:71:2544:70:2453:-178.58,0,-186.765	1/1:97:0,97:0:0:97:3455:-311.159,-29.1999,0	0/1:120:70,50:70:2508:50:1762:-122.738,0,-189.849	0/1:134:52,82:52:1864:82:2898:-220.719,0,-127.701	0/1:149:73,75:73:2620:75:2652:-194.01,0,-191.134	0/1:81:49,32:49:1756:32:1144:-78.8861,0,-133.941	0/1:55:28,27:28:1004:27:964:-70.5202,0,-74.1192	1/1:156:7,149:7:252:149:5271:-451.505,-23.9317,0	1/1:120:1,119:1:32:119:4242:-378.761,-32.9243,0	1/1:282:0,281:0:0:281:9954:-895.555,-84.5894,0	1/1:267:0,267:0:0:267:9476:-852.807,-80.375,0	0/1:44:22,22:22:788:22:779:-57.1867,0,-57.9995	0/1:313:138,175:138:4895:175:6189:-462.893,0,-346.484	1/1:187:5,182:5:180:182:6461:-565.027,-39.7405,0	1/1:140:0,140:0:0:140:4971:-447.505,-42.1442,0	0/1:8:5,3:5:176:3:108:-7.66693,0,-13.7768	1/1:41:0,41:0:0:41:1446:-130.435,-12.3422,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:8:0,8:0:0:8:276:-25.1752,-2.40824,0	1/1:23:0,23:0:0:23:812:-73.4009,-6.92369,0	0/1:229:113,116:113:4048:116:4108:-300.971,0,-295.571	1/1:209:0,209:0:0:209:7385:-664.706,-62.9153,0	1/1:139:0,139:0:0:139:4933:-444.078,-41.8432,0	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:195:90,104:90:3203:104:3676:-272.285,0,-229.734	1/1:70:0,70:0:0:70:2469:-222.464,-21.0721,0	0/1:158:72,86:72:2566:86:3043:-226.539,0,-183.626	0/1:70:36,34:36:1279:34:1196:-86.8714,0,-94.3403	1/1:75:0,75:0:0:75:2673:-240.815,-22.5773,0	1/1:82:0,82:0:0:82:2899:-261.145,-24.6845,0	0/1:159:76,83:76:2715:83:2927:-215.8,0,-196.729	1/1:185:1,184:1:36:184:6522:-583.471,-52.0923,0	0/1:96:41,55:41:1468:55:1957:-147.506,0,-103.517	1/1:180:0,179:0:0:179:6340:-570.143,-53.8844,0	1/1:205:0,205:0:0:205:7295:-656.605,-61.7112,0	0/1:8:3,5:3:104:5:180:-14.1438,0,-7.29457	0/1:536:255,281:255:9103:281:9976:-736.43,0,-657.849	1/1:56:0,56:0:0:56:1984:-178.824,-16.8577,0	0/1:26:16,10:16:567:10:350:-24.0096,0,-43.4889	1/1:177:0,177:0:0:177:6236:-560.056,-53.2823,0	0/1:41:14,27:14:504:27:953:-73.7387,0,-33.3559	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/1:28:15,13:15:531:13:462:-33.4877,0,-39.6931	1/1:124:0,124:0:0:124:4369:-393.377,-37.3277,0	0/1:206:95,111:95:3399:111:3952:-293.859,0,-244.112	0/1:6:5,1:5:180:1:36:-1.78699,0,-14.7459	0/1:131:73,58:73:2605:58:2062:-146.417,0,-195.26	0/1:219:98,121:98:3520:121:4278:-318.771,0,-251.083	0/1:157:79,78:79:2815:78:2767:-202,0,-206.328	0/1:117:52,65:52:1852:65:2319:-173.7,0,-131.739	1/1:84:0,84:0:0:84:2992:-269.466,-25.2865,0	1/1:186:2,184:2:72:184:6549:-582.659,-49.1549,0	0/1:95:34,61:34:1215:61:2159:-165.979,0,-81.0579	0/1:123:54,69:54:1928:69:2455:-184.042,0,-136.767	0/1:150:78,71:78:2795:71:2500:-180.078,0,-206.61	1/1:20:0,20:0:0:20:712:-63.9146,-6.0206,0	0/1:110:57,53:57:2036:53:1865:-134.457,0,-150.394	1/1:76:0,76:0:0:76:2732:-246.122,-22.8783,0	1/1:315:0,315:0:0:315:11250:-1012.39,-94.8245,0	1/1:112:1,111:1:36:111:3955:-352.475,-30.1171,0	0/1:199:124,75:124:4432:75:2675:-181.085,0,-339.147	1/1:120:1,119:1:36:119:4217:-376.109,-32.5253,0	0/1:18:5,13:5:180:13:456:-35.9547,0,-11.1335	1/1:130:1,129:1:36:129:4597:-410.242,-35.5356,0	0/1:108:40,68:40:1428:68:2428:-186.26,0,-96.3059	1/1:216:0,216:0:0:216:7583:-682.472,-65.0225,0	0/1:123:50,73:50:1779:73:2589:-196.231,0,-123.365	0/1:115:63,52:63:2240:52:1835:-130.793,0,-167.246	1/1:116:0,116:0:0:116:4126:-371.526,-34.9195,0	0/1:131:71,60:71:2540:60:2098:-149.651,0,-189.416	0/1:41:14,27:14:500:27:947:-73.1972,0,-32.9935	1/1:104:0,104:0:0:104:3690:-332.304,-31.3071,0	0/1:98:51,47:51:1820:47:1640:-118.355,0,-134.58	1/1:161:0,161:0:0:161:5606:-504.437,-48.4658,0	0/1:245:121,123:121:4319:123:4371:-319.795,0,-315.115	0/1:65:48,17:48:1690:17:600:-34.7622,0,-132.818	1/1:52:1,51:1:36:51:1807:-159.313,-12.0553,0	1/1:130:1,129:1:36:129:4573:-407.605,-35.5356,0
chr05	27037791	.	T	G	164134	PASS	AB=0.496149;ABP=3.64581;AC=137;AF=0.728723;AN=188;AO=7640;CIGAR=1X;DP=10149;DPB=10149;DPRA=0;EPP=16050.4;EPPR=5119.66;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.9507;MQMR=60;NS=94;NUMALT=1;ODDS=1.10168;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=273313;QR=89877;RO=2506;RPL=63;RPP=16050.4;RPPR=5119.66;RPR=7577;RUN=1;SAF=7640;SAP=16593.1;SAR=0;SRF=2506;SRP=5444.72;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:49:22,27:22:792:27:972:-73.0474,0,-56.8552	1/1:147:0,147:0:0:147:5268:-474.247,-44.2514,0	0/1:154:78,76:78:2796:76:2713:-198.054,0,-205.521	1/1:217:0,217:0:0:217:7733:-695.988,-65.3235,0	0/1:83:39,44:39:1404:44:1558:-115.524,0,-101.674	0/1:67:39,28:39:1404:28:1008:-70.8592,0,-106.49	0/1:146:53,93:53:1904:93:3336:-256.507,0,-127.687	1/1:152:1,151:1:36:151:5401:-482.593,-42.1583,0	0/1:109:52,57:52:1868:57:2021:-149.349,0,-135.587	1/1:92:0,92:0:0:92:3280:-295.42,-27.6948,0	1/1:53:0,53:0:0:53:1905:-171.728,-15.9546,0	1/1:65:1,64:1:36:64:2292:-202.926,-15.9687,0	0/1:45:22,23:22:783:23:828:-61.2978,0,-57.2466	0/1:78:40,38:40:1436:38:1364:-99.5804,0,-106.057	0/1:54:29,25:29:1044:25:896:-64.7047,0,-78.0192	1/1:37:0,37:0:0:37:1319:-119.011,-11.1381,0	0/1:62:33,29:33:1164:29:1027:-73.8873,0,-86.4003	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:34:16,18:16:576:18:648:-48.4169,0,-41.94	0/1:175:98,77:98:3524:77:2751:-195.151,0,-264.688	0/1:151:95,56:95:3390:56:2004:-135.178,0,-259.859	0/1:171:119,52:119:4272:52:1853:-115.572,0,-333.181	0/1:119:54,65:54:1944:65:2336:-174.677,0,-139.413	0/1:146:15,131:15:540:131:4663:-375.871,0,-4.98616	1/1:114:2,112:2:72:112:4012:-354.43,-27.4807,0	1/1:412:1,411:1:36:411:14703:-1319.41,-120.426,0	1/1:245:0,245:0:0:245:8753:-787.753,-73.7524,0	0/1:20:7,13:7:252:13:468:-36.439,0,-17.0084	0/1:264:121,143:121:4336:143:5125:-380.025,0,-310.943	1/1:178:4,174:4:144:174:6207:-545.402,-40.2697,0	1/1:149:0,149:0:0:149:5325:-479.379,-44.8535,0	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	1/1:19:1,18:1:36:18:644:-54.6841,-2.1213,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:8:0,8:0:0:8:282:-25.7211,-2.40824,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:132:75,57:75:2692:57:2052:-145.215,0,-202.788	1/1:284:1,283:1:36:283:10172:-911.802,-81.8942,0	1/1:66:0,66:0:0:66:2372:-213.72,-19.868,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:133:68,64:68:2440:64:2304:-167.525,0,-179.759	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	0/1:149:73,76:73:2628:76:2719:-200.099,0,-191.913	0/1:49:20,29:20:716:29:1044:-79.5243,0,-50.0172	1/1:46:0,46:0:0:46:1656:-149.328,-13.8474,0	1/1:160:0,160:0:0:160:5702:-513.293,-48.1648,0	0/1:144:73,71:73:2608:71:2529:-184.494,0,-191.62	1/1:208:1,207:1:36:207:7432:-665.304,-59.016,0	0/1:159:76,83:76:2728:83:2938:-216.79,0,-197.899	1/1:174:0,174:0:0:174:6190:-557.192,-52.3792,0	1/1:201:0,201:0:0:201:7201:-648.142,-60.507,0	0/1:17:6,11:6:216:11:396:-30.8652,0,-14.673	0/1:150:83,67:83:2970:67:2412:-172.181,0,-222.377	1/1:65:0,65:0:0:65:2339:-210.394,-19.567,0	0/1:21:11,10:11:396:10:353:-25.7869,0,-29.6611	1/1:146:0,146:0:0:146:5162:-464.72,-43.9504,0	0/1:59:25,34:25:896:34:1220:-92.346,0,-63.1996	0/1:10:3,7:3:108:7:252:-20.0187,0,-7.06487	0/1:21:10,10:10:360:10:360:-26.5001,0,-26.5001	1/1:157:0,157:0:0:157:5629:-506.728,-47.2617,0	0/1:105:53,51:53:1895:51:1806:-131.146,0,-139.16	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:240:141,99:141:5072:99:3556:-248,0,-384.374	0/1:243:134,109:134:4816:109:3904:-278.403,0,-360.443	0/1:90:50,40:50:1792:40:1421:-101.093,0,-134.47	0/1:106:55,51:55:1968:51:1820:-132.172,0,-145.486	1/1:179:1,178:1:36:178:6370:-569.783,-50.2861,0	1/1:178:5,173:5:180:173:6196:-541.183,-37.0313,0	0/1:24:10,14:10:360:14:504:-38.4734,0,-25.5196	0/1:112:50,62:50:1796:62:2220:-166.349,0,-128.207	0/1:85:39,46:39:1395:46:1647:-122.93,0,-100.261	1/1:22:0,22:0:0:22:777:-70.2504,-6.62266,0	0/1:141:91,50:91:3259:50:1777:-117.65,0,-251.085	1/1:61:0,61:0:0:61:2183:-196.735,-18.3628,0	1/1:252:0,252:0:0:252:9034:-813.025,-75.8596,0	1/1:149:0,149:0:0:149:5344:-481.092,-44.8535,0	0/1:89:39,50:39:1404:50:1788:-134.41,0,-99.8676	1/1:87:0,87:0:0:87:3116:-280.666,-26.1896,0	0/1:11:10,1:10:360:1:36:-0.286945,0,-29.433	1/1:99:3,96:3:108:96:3436:-299.378,-19.7268,0	0/1:159:74,85:74:2656:85:3024:-224.526,0,-191.422	1/1:300:1,299:1:36:299:10665:-956.154,-86.7107,0	0/1:86:45,41:45:1592:41:1472:-106.888,0,-117.679	0/1:56:33,23:33:1184:23:824:-57.6256,0,-90.0106	1/1:57:0,57:0:0:57:2039:-183.781,-17.1587,0	0/1:111:46,65:46:1648:65:2336:-177.085,0,-115.194	0/1:22:10,12:10:345:12:432:-32.5985,0,-24.7582	1/1:68:0,68:0:0:68:2424:-218.414,-20.47,0	0/1:66:25,41:25:900:41:1476:-113.268,0,-61.453	1/1:62:0,62:0:0:62:2228:-200.784,-18.6639,0	0/1:128:70,58:70:2516:58:2088:-149.658,0,-188.16	0/1:77:44,33:44:1580:33:1188:-84.0493,0,-119.312	1/1:140:1,139:1:36:139:4973:-444.09,-38.5459,0	1/1:70:0,70:0:0:70:2520:-227.051,-21.0721,0
chr05	27037800	.	TAAC	TATG	161760	PASS	AB=0.495325;ABP=3.9645;AC=137;AF=0.728723;AN=188;AO=7747;CIGAR=2M2X;DP=10320;DPB=10320;DPRA=0;EPP=16799.4;EPPR=5496.85;GTI=2;LEN=2;MEANALT=1.34043;MQM=59.9429;MQMR=60;NS=94;NUMALT=1;ODDS=0.978702;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18;PQR=18;PRO=0.5;QA=275113;QR=88558;RO=2538;RPL=7744;RPP=16799.4;RPPR=5496.85;RPR=3;RUN=1;SAF=7747;SAP=16825.4;SAR=0;SRF=2538;SRP=5514.21;SRR=0;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:22,28:22:765:28:995:-74.8122,0,-54.1162	1/1:150:0,150:0:0:150:5283:-475.605,-45.1545,0	0/1:156:79,76:79:2743:76:2699:-196.241,0,-200.204	1/1:219:0,219:0:0:219:7736:-696.261,-65.9256,0	0/1:86:39,47:39:1358:47:1690:-126.498,0,-96.6277	0/1:67:39,28:39:1385:28:1008:-70.8592,0,-104.779	0/1:151:54,97:54:1871:97:3417:-262.287,0,-123.208	1/1:154:1,153:1:36:153:5336:-476.752,-42.7603,0	0/1:110:52,58:52:1840:58:2031:-149.944,0,-132.767	1/1:92:0,92:0:0:92:3271:-294.55,-27.6948,0	1/1:56:0,56:0:0:56:2001:-180.363,-16.8577,0	1/1:66:1,64:1:35:64:2264:-200.499,-16.4232,0	0/1:45:22,23:22:773:23:816:-60.215,0,-56.344	0/1:79:40,39:40:1401:39:1398:-102.333,0,-102.604	0/1:54:29,24:29:1034:24:827:-58.4283,0,-77.0595	1/1:38:0,38:0:0:38:1353:-122.034,-11.4391,0	0/1:62:33,29:33:1110:29:1009:-72.4361,0,-81.5365	1/1:43:0,43:0:0:43:1529:-137.902,-12.9443,0	0/1:34:16,18:16:541:18:646:-48.2363,0,-38.7743	0/1:179:98,80:98:3408:80:2853:-203.064,0,-252.995	0/1:151:95,56:95:3324:56:1999:-134.727,0,-253.927	0/1:174:121,52:121:4195:52:1855:-114.79,0,-325.302	0/1:120:55,65:55:1915:65:2338:-174.556,0,-136.5	0/1:151:15,135:15:514:135:4823:-388.707,0,-1.0715	1/1:114:1,112:1:36:112:3958:-352.812,-30.7779,0	1/1:414:0,414:0:0:414:14787:-1330.57,-124.626,0	1/1:247:0,247:0:0:247:8787:-790.816,-74.3544,0	0/1:20:7,13:7:240:13:468:-36.439,0,-15.9136	0/1:273:125,146:125:4372:146:5195:-385.892,0,-311.865	1/1:179:3,175:3:107:175:6209:-548.923,-43.9602,0	1/1:150:0,149:0:0:149:5255:-472.728,-44.8535,0	0/1:8:7,1:7:247:1:36:-1.19004,0,-20.1652	1/1:21:1,19:1:29:19:671:-57.7731,-3.44584,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:138:79,59:79:2788:59:2092:-147.006,0,-209.619	1/1:287:1,284:1:36:284:10107:-905.964,-82.5551,0	1/1:67:0,67:0:0:67:2394:-215.699,-20.169,0	1/1:5:0,5:0:0:5:169:-15.5112,-1.50515,0	0/1:132:67,65:67:2339:65:2322:-169.503,0,-171.036	1/1:30:0,27:0:0:27:961:-86.4488,-8.12781,0	0/1:150:73,75:73:2582:75:2694:-197.792,0,-187.719	0/1:49:20,29:20:702:29:1031:-78.3519,0,-48.7535	1/1:47:0,47:0:0:47:1664:-150.045,-14.1484,0	1/1:163:0,162:0:0:162:5721:-514.645,-48.7669,0	0/1:144:73,71:73:2522:71:2493:-181.254,0,-183.885	1/1:216:1,215:1:30:215:7649:-685.429,-62.0229,0	0/1:163:76,86:76:2685:86:3073:-227.671,0,-192.769	1/1:176:0,175:0:0:175:6271:-564.209,-52.6803,0	1/1:200:0,200:0:0:200:7106:-639.598,-60.206,0	0/1:18:6,12:6:215:12:432:-33.8027,0,-14.2806	0/1:153:84,69:84:2939:69:2453:-174.966,0,-218.69	1/1:66:0,66:0:0:66:2344:-210.653,-19.868,0	0/1:23:12,10:12:393:10:347:-24.582,0,-28.7054	1/1:144:0,143:0:0:143:5082:-457.278,-43.0473,0	0/1:61:26,35:26:907:35:1258:-95.1627,0,-63.5813	0/1:10:3,7:3:108:7:252:-20.0187,0,-7.06487	0/1:21:11,10:11:384:10:358:-26.2413,0,-28.5717	1/1:159:0,159:0:0:159:5665:-509.969,-47.8638,0	0/1:107:55,52:55:1932:52:1857:-135.195,0,-141.944	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:246:143,102:143:5029:102:3640:-253.692,0,-378.653	0/1:252:139,111:139:4840:111:3941:-279.264,0,-360.146	0/1:94:52,42:52:1818:42:1480:-105.195,0,-135.601	0/1:106:55,51:55:1922:51:1808:-131.09,0,-141.346	1/1:187:1,186:1:36:186:6592:-589.76,-52.6943,0	1/1:185:5,180:5:173:180:6349:-555.593,-39.781,0	0/1:25:10,15:10:342:15:518:-39.4152,0,-23.5838	0/1:114:51,63:51:1768:63:2231:-166.734,0,-125.084	0/1:85:39,46:39:1365:46:1654:-123.561,0,-97.5597	1/1:22:0,22:0:0:22:766:-69.2577,-6.62266,0	0/1:146:92,53:92:3247:53:1855:-123.226,0,-248.553	1/1:63:0,63:0:0:63:2240:-201.861,-18.9649,0	1/1:261:0,261:0:0:261:9208:-828.689,-78.5688,0	1/1:150:0,149:0:0:149:5313:-478.052,-44.8535,0	0/1:91:41,50:41:1434:50:1773:-132.458,0,-101.961	1/1:88:0,88:0:0:88:3145:-283.275,-26.4906,0	0/1:11:10,1:10:352:1:36:-0.286945,0,-28.7068	1/1:101:3,98:3:108:98:3493:-304.505,-20.3289,0	0/1:158:75,83:75:2545:83:2986:-221.409,0,-181.739	1/1:305:1,304:1:36:304:10755:-964.259,-88.2159,0	0/1:87:45,42:45:1569:42:1502:-109.285,0,-115.31	0/1:57:34,23:34:1169:23:826:-57.5051,0,-88.3519	1/1:59:0,59:0:0:59:2075:-187.018,-17.7608,0	0/1:114:47,66:47:1628:66:2357:-178.012,0,-112.43	0/1:23:9,12:9:304:12:430:-32.3589,0,-21.0103	1/1:69:0,67:0:0:67:2366:-212.919,-20.169,0	0/1:68:27,41:27:942:41:1456:-110.865,0,-64.6228	1/1:61:0,61:0:0:61:2163:-194.934,-18.3628,0	0/1:130:71,58:71:2480:58:2061:-146.694,0,-184.388	0/1:77:43,34:43:1502:34:1207:-85.7559,0,-112.294	1/1:142:1,141:1:36:141:5009:-447.346,-39.148,0	1/1:70:0,70:0:0:70:2496:-224.891,-21.0721,0
chr05	27219085	.	GTCACTG	ATCACTA,ATGACTA	194506	PASS	AB=0.560976,0.436546;ABP=250.611,271.146;AC=137,51;AF=0.728723,0.271277;AN=188;AO=11958,3356;CIGAR=1X5M1X,1X1M1X3M1X;DP=15339;DPB=15339.4;DPRA=0,0.781325;EPP=21498.8,7290.47;EPPR=0;GTI=3;LEN=7,7;MEANALT=1.81915,2.31481;MQM=26.0741,31.9434;MQMR=0;NS=94;NUMALT=2;ODDS=4.83338;PAIRED=0,0;PAIREDR=0;PAO=0,1;PQA=0,33;PQR=0;PRO=0;QA=309281,118530;QR=0;RO=0;RPL=539,3356;RPP=21498.8,7290.47;RPPR=0;RPR=11419,0;RUN=1,1;SAF=11958,3356;SAP=25969.5,7290.47;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:18:0,18,0:0:0:18,0:414,0:-32.601,-5.41854,0,-32.601,-5.41854,-32.601	1/1:105:0,105,0:0:0:105,0:2413,0:-189.105,-31.6082,0,-189.105,-31.6082,-189.105	1/2:108:0,73,35:0:0:73,35:1679,1234:-196.435,-87.0796,-65.1044,-109.629,0,-99.0927	1/1:141:0,141,0:0:0:141,0:3939,0:-317.217,-42.4452,0,-317.217,-42.4452,-317.217	1/2:25:0,20,5:0:0:20,5:498,180:-46.1337,-12.814,-6.7934,-33.6126,0,-32.1074	1/2:38:0,23,15:0:0:23,15:542,524:-72.8924,-37.3074,-30.3837,-35.8523,0,-31.3368	1/2:89:0,45,44:0:0:45,44:1257,1531:-192.817,-105.436,-91.8892,-87.6555,0,-74.4101	1/1:140:0,139,0:0:0:139,0:3195,0:-250,-41.8432,0,-250,-41.8432,-250	1/2:59:0,43,16:0:0:43,16:987,566:-104.362,-40.0845,-27.1402,-64.5577,0,-59.7412	1/1:41:0,41,0:0:0:41,0:1141,0:-92.0435,-12.3422,0,-92.0435,-12.3422,-92.0435	1/1:396:0,396,0:0:0:396,0:11174,0:-901.694,-119.208,0,-901.694,-119.208,-901.694	1/1:79:0,79,0:0:0:79,0:1921,0:-152.049,-23.7814,0,-152.049,-23.7814,-152.049	1/2:65:0,38,27:0:0:38,27:935,963:-130.189,-67.4318,-55.9927,-62.7014,0,-54.5736	1/2:93:0,61,32:0:0:61,32:1624,1122:-187.851,-75.8682,-57.5054,-112.258,0,-102.625	1/2:93:0,45,48:0:0:45,48:1302,1709:-207.745,-115.041,-101.494,-92.9841,0,-78.5347	1/1:69:0,69,0:0:0:69,0:1786,0:-142.714,-20.7711,0,-142.714,-20.7711,-142.714	1/2:74:0,34,40:0:0:34,40:812,1424:-152.155,-98.2683,-88.0332,-54.1407,0,-42.0995	1/1:82:0,82,0:0:0:82,0:2050,0:-162.792,-24.6845,0,-162.792,-24.6845,-162.792	1/2:179:0,96,83:0:0:96,83:2243,2956:-352.834,-205.697,-176.798,-147.397,0,-122.412	1/2:137:0,59,78:0:0:59,78:1638,2751:-301.143,-187.471,-169.71,-113.942,0,-90.4616	1/2:80:0,53,27:0:0:53,27:1323,950:-154.299,-65.5643,-49.6097,-89.009,0,-80.8812	1/2:45:0,14,30:0:0:14,30:420,1042:-99.9445,-70.1571,-65.9427,-29.7172,0,-20.6863	1/2:70:0,38,32:0:0:38,32:1064,1115:-148.673,-74.6582,-63.2191,-74.2873,0,-64.6544	1/1:40:0,37,3:0:0:37,3:923,104:-72.9942,-11.1381,0,-65.7838,-3.63356,-64.8807	1/1:45:0,45,0:0:0:45,0:1123,0:-89.126,-13.5464,0,-89.126,-13.5464,-89.126	1/1:244:0,244,0:0:0:244,0:7271,0:-589.363,-73.4513,0,-589.363,-73.4513,-589.363	1/1:102:0,102,0:0:0:102,0:2542,0:-201.429,-30.7051,0,-201.429,-30.7051,-201.429	1/2:32:0,22,10:0:0:22,10:659,355:-72.7825,-24.8818,-18.2592,-48.1975,0,-45.1872	1/2:152:0,74,78:0:0:74,78:2202,2759:-343.035,-186.966,-164.69,-156.352,0,-132.872	1/1:94:0,94,0:0:0:94,0:2346,0:-185.951,-28.2968,0,-185.951,-28.2968,-185.951	1/1:112:0,109,3:0:0:109,3:3051,108:-245.32,-32.8123,0,-237.974,-25.1627,-237.071	1/2:522:0,287,234:0:0:287,234:7157,8260:-1044.46,-564.067,-477.672,-480.438,0,-409.997	1/1:736:0,736,0:0:0:736,0:18371,0:-1455.34,-221.558,0,-1455.34,-221.558,-1455.34	1/1:669:0,669,0:0:0:669,0:15384,0:-1204.49,-201.389,0,-1204.49,-201.389,-1204.49	1/1:825:0,824,0:0:0:824,0:18957,0:-1484.14,-248.049,0,-1484.14,-248.049,-1484.14	1/1:547:0,546,0:0:0:546,0:12556,0:-982.729,-164.362,0,-982.729,-164.362,-982.729	1/2:161:0,99,62:0:0:99,62:3075,2209:-374.432,-150.584,-120.782,-224.143,0,-205.479	1/1:125:0,125,0:0:0:125,0:3125,0:-247.681,-37.6288,0,-247.681,-37.6288,-247.681	1/1:428:0,428,0:0:0:428,0:10034,0:-788.749,-128.841,0,-788.749,-128.841,-788.749	1/2:309:0,193,115:0:0:193,115:4819,4068:-596.426,-273.032,-214.933,-323.321,0,-288.702	1/2:118:0,53,65:0:0:53,65:1334,2266:-245.423,-155.599,-139.645,-90.0804,0,-70.5135	1/1:258:0,258,0:0:0:258,0:6656,0:-531.49,-77.6657,0,-531.49,-77.6657,-531.49	1/2:81:0,40,41:0:0:40,41:996,1428:-163.069,-96.1792,-84.138,-67.146,0,-54.8038	1/2:83:0,48,34:0:0:48,34:1436,1212:-186.423,-82.8898,-68.4404,-103.555,0,-93.3203	1/1:75:0,75,0:0:0:75,0:2150,0:-175.732,-22.5773,0,-175.732,-22.5773,-175.732	1/1:54:0,54,0:0:0:54,0:1612,0:-130.73,-16.2556,0,-130.73,-16.2556,-130.73	1/2:89:0,37,52:0:0:37,52:864,1830:-185.126,-128.302,-117.164,-57.0708,0,-41.4172	1/1:142:0,142,0:0:0:142,0:3975,0:-320.102,-42.7463,0,-320.102,-42.7463,-320.102	1/2:39:0,30,9:0:0:30,9:834,318:-80.0089,-22.1401,-13.1092,-58.1591,0,-55.4499	1/1:127:0,127,0:0:0:127,0:3537,0:-284.411,-38.2308,0,-284.411,-38.2308,-284.411	1/2:34:0,18,16:0:0:18,16:538,566:-76.8679,-38.7563,-33.3378,-38.3972,0,-33.5807	1/2:598:0,371,223:0:0:371,223:10331,7902:-1258.58,-540.361,-428.679,-718.202,0,-651.072	1/2:68:0,27,41:0:0:27,41:619,1449:-141.539,-101.208,-93.0805,-40.5732,0,-28.231	1/1:53:0,53,0:0:0:53,0:1589,0:-129.044,-15.9546,0,-129.044,-15.9546,-129.044	1/2:467:0,247,219:0:0:247,219:5690,7735:-911.135,-539.921,-465.567,-371.163,0,-305.237	1/1:70:0,70,0:0:0:70,0:1748,0:-138.618,-21.072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chr05	27258544	.	G	A	91591.2	PASS	AB=0.487449;ABP=14.4569;AC=49;AF=0.260638;AN=188;AO=4119;CIGAR=1X;DP=17982;DPB=17982;DPRA=0.975314;EPP=8947.31;EPPR=30088.8;GTI=1;LEN=1;MEANALT=1.04762;MQM=59.7708;MQMR=59.964;NS=94;NUMALT=1;ODDS=3.34339;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=146028;QR=493594;RO=13859;RPL=1860;RPP=86.9386;RPPR=76.1013;RPR=2259;RUN=1;SAF=1860;SAP=86.9386;SAR=2259;SRF=6589;SRP=75.6739;SRR=7270;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:69:69,0:69:2471:0:0:0,-20.7711,-222.641	0/0:213:213,0:213:7600:0:0:0,-64.1194,-683.988	0/0:364:364,0:364:13003:0:0:0,-109.575,-1170.06	0/0:519:519,0:519:18453:0:0:0,-156.235,-1659.73	0/1:38:16,22:16:572:22:775:-58.632,0,-40.3743	0/1:48:26,22:26:932:22:771:-55.2609,0,-69.7494	0/1:227:112,115:112:3986:115:4091:-299.808,0,-290.597	0/0:211:208,3:208:7401:3:99:0,-54.2807,-656.902	0/1:164:95,69:95:3363:69:2452:-171.528,0,-253.472	0/0:206:206,0:206:7358:0:0:0,-62.0122,-662.263	0/0:203:203,0:203:7269:0:0:0,-61.1091,-654.26	0/0:211:210,1:210:7474:1:36:0,-59.9191,-669.103	0/1:146:85,61:85:3044:61:2172:-151.645,0,-230.238	0/1:253:132,121:132:4671:121:4286:-309.748,0,-344.39	0/1:153:91,62:91:3247:62:2202:-152.33,0,-246.394	0/0:112:112,0:112:3991:0:0:0,-33.7154,-359.381	0/1:179:101,78:101:3590:78:2780:-196.557,0,-269.418	0/0:103:102,1:102:3655:1:36:0,-27.4078,-325.554	0/1:89:56,33:56:2000:33:1171:-78.905,0,-153.482	0/1:419:229,190:229:8180:190:6729:-478.99,0,-610.082	0/1:340:155,185:155:5504:185:6553:-487.259,0,-393.139	0/1:170:52,118:52:1851:118:4192:-326.234,0,-115.694	0/1:179:90,89:90:3187:89:3168:-231.421,0,-233.165	0/0:184:175,9:175:6238:9:324:0,-25.8837,-532.009	0/0:119:119,0:119:4232:0:0:0,-35.8226,-381.06	0/0:416:413,3:413:14674:3:108:0,-115.153,-1310.32	0/0:547:545,1:545:19411:1:32:0,-161.503,-1743.31	0/1:66:35,31:35:1260:31:1086:-78.1796,0,-93.8375	0/1:482:242,240:242:8637:240:8525:-622.13,0,-632.184	0/0:238:236,2:236:8391:2:72:0,-64.8084,-748.36	0/0:274:274,0:274:9774:0:0:0,-82.4822,-879.608	0/1:7:4,3:4:144:3:99:-7.12937,0,-11.2064	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.388	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/1:422:211,211:211:7515:211:7492:-547.257,0,-549.355	0/0:208:208,0:208:7421:0:0:0,-62.6142,-667.937	0/0:195:195,0:195:6963:0:0:0,-58.7008,-626.725	0/1:9:4,5:4:144:5:172:-13.1087,0,-10.6043	0/1:287:158,129:158:5648:129:4553:-323.5,0,-422.043	0/0:116:116,0:116:4133:0:0:0,-34.9195,-372.154	0/1:192:101,91:101:3628:91:3243:-234.197,0,-268.926	0/1:152:72,80:72:2571:80:2839:-209.935,0,-185.883	0/0:134:134,0:134:4753:0:0:0,-40.338,-427.931	0/0:215:214,0:214:7618:0:0:0,-64.4204,-685.296	0/1:159:87,72:87:3116:72:2552:-182.03,0,-232.798	0/0:293:288,5:288:10178:5:172:0,-72.3838,-900.145	0/1:144:76,68:76:2703:68:2406:-173.448,0,-200.166	0/0:228:228,0:228:8079:0:0:0,-68.6348,-727.123	0/1:272:138,134:138:4919:134:4753:-346.002,0,-360.98	0/1:25:8,17:8:284:17:604:-47.1079,0,-18.3776	0/1:183:105,78:105:3756:78:2772:-194.631,0,-283.151	0/0:115:115,0:115:4079:0:0:0,-34.6184,-367.297	0/1:32:9,23:9:324:23:824:-64.8504,0,-19.8729	0/0:293:293,0:293:10458:0:0:0,-88.2018,-941.141	0/1:49:31,18:31:1090:18:648:-43.8729,0,-83.6574	0/1:22:12,10:12:432:10:360:-26.1216,0,-32.5985	0/1:65:34,31:34:1220:31:1107:-80.3732,0,-90.5399	0/0:160:160,0:160:5701:0:0:0,-48.1648,-513.21	0/1:284:168,116:168:5972:116:4076:-281.498,0,-452.085	0/1:16:7,9:7:252:9:320:-24.3259,0,-18.2125	0/0:382:382,0:382:13566:0:0:0,-114.993,-1220.74	0/1:345:189,156:189:6753:156:5523:-393.275,0,-503.618	0/1:156:86,70:86:3060:70:2493:-177.663,0,-228.667	0/1:175:78,97:78:2775:97:3430:-256.207,0,-197.311	0/0:248:246,2:246:8755:2:68:0,-68.1977,-781.483	0/0:194:188,6:188:6708:6:216:0,-38.6093,-583.991	0/1:122:61,60:61:2172:60:2148:-156.803,0,-158.962	0/1:154:66,88:66:2342:88:3093:-232.229,0,-164.68	0/1:216:116,100:116:4156:100:3544:-254.146,0,-309.2	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/1:259:133,126:133:4729:126:4470:-324.397,0,-347.792	0/0:163:162,1:162:5780:1:36:0,-45.4696,-516.71	0/0:502:502,0:502:17849:0:0:0,-151.117,-1606	0/0:296:296,0:296:10567:0:0:0,-89.1049,-950.933	0/1:116:53,63:53:1900:63:2235:-166.459,0,-136.358	0/0:300:297,3:297:10611:3:104:0,-80.6062,-945.185	0/1:15:6,9:6:216:9:324:-24.99,0,-15.2751	0/0:268:267,1:267:9522:1:36:0,-77.0778,-853.323	0/1:163:85,78:85:3017:78:2758:-199.359,0,-222.691	0/0:282:282,0:282:10027:0:0:0,-84.8905,-902.368	0/1:176:85,91:85:3021:91:3214:-236.418,0,-219.139	0/1:162:83,79:83:2959:79:2824:-205.631,0,-217.777	0/0:159:159,0:159:5646:0:0:0,-47.8638,-508.234	0/1:294:152,142:152:5427:142:5039:-365.155,0,-400.032	0/1:56:22,34:22:783:34:1211:-92.4378,0,-53.9353	0/0:196:196,0:196:6945:0:0:0,-59.0019,-625.114	0/1:165:91,74:91:3247:74:2614:-185.764,0,-242.781	0/0:154:154,0:154:5467:0:0:0,-46.3586,-491.671	0/1:323:167,156:167:5967:156:5518:-399.489,0,-439.905	0/1:196:71,124:71:2518:124:4370:-334.387,0,-167.811	0/0:166:166,0:166:5916:0:0:0,-49.971,-532.545	0/0:210:207,3:207:7305:3:108:0,-53.1411,-647.43
chr05	27595169	.	GTAT	ATAC,ATAT	234975	PASS	AB=0.493323,0.504047;ABP=4.92429,3.71333;AC=138,50;AF=0.734043,0.265957;AN=188;AO=8547,2531;CIGAR=1X2M1X,1X3M;DP=11101;DPB=11101.2;DPRA=0,1.28803;EPP=18545.2,5472.98;EPPR=0;GTI=2;LEN=4,1;MEANALT=1.91489,2.26562;MQM=59.995,60;MQMR=0;NS=94;NUMALT=2;ODDS=3.67455;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=36,0;PQR=0;PRO=0;QA=299757,90193;QR=0;RO=0;RPL=0,0;RPP=18562.6,5499.01;RPPR=0;RPR=8547,2531;RUN=1,1;SAF=2,3;SAP=18545.2,5472.98;SAR=8545,2528;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:35:0,35,0:0:0:35,0:1215,0:-109.652,-10.5361,0,-109.652,-10.5361,-109.652	1/1:181:0,181,0:0:0:181,0:6321,0:-568.994,-54.4864,0,-568.994,-54.4864,-568.994	1/1:195:0,195,0:0:0:195,0:6836,0:-615.325,-58.7009,0,-615.325,-58.7009,-615.325	1/1:354:0,353,0:0:0:353,0:12340,0:-1110.22,-106.264,0,-1110.22,-106.264,-1110.22	1/2:120:0,54,66:0:0:54,66:1916,2363:-349.165,-193.06,-176.804,-156.461,0,-136.593	1/2:71:0,32,39:0:0:32,39:1115,1391:-204.419,-113.748,-104.115,-91.0226,0,-79.2824	1/2:100:0,66,33:0:0:66,33:2311,1176:-283.992,-95.9607,-76.0927,-188.131,0,-178.197	1/1:211:0,210,1:0:0:210,1:7340,36:-660.309,-63.2163,0,-657.371,-59.9191,-657.07	1/2:117:0,50,67:0:0:50,67:1747,2385:-336.846,-194.737,-179.686,-142.461,0,-122.292	1/1:148:0,148,0:0:0:148,0:5236,0:-471.384,-44.5524,0,-471.384,-44.5524,-471.384	1/1:51:0,51,0:0:0:51,0:1805,0:-162.731,-15.3525,0,-162.731,-15.3525,-162.731	1/1:59:0,59,0:0:0:59,0:2076,0:-187.11,-17.7608,0,-187.11,-17.7608,-187.11	1/2:53:0,26,26:0:0:26,26:929,936:-152.116,-76.3729,-68.5461,-75.7423,0,-67.9155	1/2:52:0,24,28:0:0:24,28:853,1003:-151.666,-82.1568,-74.9321,-69.8658,0,-61.437	1/2:52:0,29,23:0:0:29,23:1035,828:-152.296,-67.9204,-59.1906,-84.7343,0,-77.8107	1/1:33:0,33,0:0:0:33,0:1134,0:-102.362,-9.93399,0,-102.362,-9.93399,-102.362	1/2:46:0,22,24:0:0:22,24:748,860:-131.159,-70.4971,-63.8745,-61.011,0,-53.7862	1/1:38:0,38,0:0:0:38,0:1350,0:-121.8,-11.4391,0,-121.8,-11.4391,-121.8	1/2:46:0,27,19:0:0:27,19:965,680:-134.491,-55.8096,-47.6818,-79.039,0,-73.3194	1/2:253:0,128,125:0:0:128,125:4464,4456:-726.636,-363.584,-325.052,-363.405,0,-325.776	1/2:230:0,131,98:0:0:131,98:4535,3503:-654.24,-285.699,-246.264,-368.613,0,-339.112	1/2:91:0,31,60:0:0:31,60:1085,2131:-262.27,-173.996,-164.664,-88.6256,0,-70.5638	1/2:99:0,48,51:0:0:48,51:1642,1828:-282.714,-149.448,-134.999,-133.615,0,-118.262	1/1:151:0,146,5:0:0:146,5:5155,180:-463.737,-43.9504,0,-449.05,-28.9035,-447.545	1/1:107:0,107,0:0:0:107,0:3752,0:-337.884,-32.2102,0,-337.884,-32.2102,-337.884	1/1:444:0,442,2:0:0:442,2:15556,68:-1399.44,-133.055,0,-1393.92,-127.2,-1393.32	1/1:310:0,309,1:0:0:309,1:10880,36:-978.763,-93.0183,0,-975.826,-89.721,-975.524	1/2:27:0,14,13:0:0:14,13:497,468:-79.0396,-38.5463,-34.3318,-40.8507,0,-36.9373	1/2:357:0,165,190:0:0:165,190:5806,6742:-1022.01,-549.373,-499.703,-472.702,0,-415.506	1/1:165:0,160,5:0:0:160,5:5613,180:-504.942,-48.1648,0,-490.254,-33.1179,-488.749	1/1:142:0,142,0:0:0:142,0:4936,0:-444.401,-42.7463,0,-444.401,-42.7463,-444.401	2/2:13:0,1,12:0:0:1,12:35,424:-38.1463,-35.2988,-34.9978,-3.61236,-0.414761,0	1/1:37:0,37,0:0:0:37,0:1304,0:-117.66,-11.1381,0,-117.66,-11.1381,-117.66	1/1:9:0,9,0:0:0:9,0:318,0:-28.9604,-2.70927,0,-28.9604,-2.70927,-28.9604	1/1:17:0,17,0:0:0:17,0:567,0:-51.3448,-5.11751,0,-51.3448,-5.11751,-51.3448	1/1:26:0,26,0:0:0:26,0:917,0:-82.8467,-7.82678,0,-82.8467,-7.82678,-82.8467	1/2:145:0,67,78:0:0:67,78:2371,2782:-420.264,-227.14,-206.971,-193.48,0,-169.999	1/1:299:0,297,1:0:0:297,1:10312,36:-927.678,-89.4059,0,-924.74,-86.4685,-924.439	1/1:69:0,69,0:0:0:69,0:2367,0:-213.29,-20.7711,0,-213.29,-20.7711,-213.29	1/2:6:0,5,1:0:0:5,1:179,36:-17.893,-3.29724,-1.79209,-14.9552,0,-14.6542	1/2:228:0,117,111:0:0:117,111:4129,3957:-659.133,-322.907,-287.687,-336.58,0,-303.166	1/1:34:0,34,0:0:0:34,0:1216,0:-109.746,-10.235,0,-109.746,-10.235,-109.746	1/2:147:0,79,68:0:0:79,68:2784,2431:-425.241,-198.575,-174.794,-227.021,0,-206.551	1/2:76:0,42,34:0:0:42,34:1476,1194:-217.666,-97.5284,-84.8852,-120.489,0,-110.254	1/1:50:0,49,1:0:0:49,1:1687,36:-151.752,-14.7505,0,-148.815,-11.4532,-148.514	1/1:157:0,156,0:0:0:156,0:5495,0:-494.333,-46.9607,0,-494.333,-46.9607,-494.333	1/2:243:0,127,116:0:0:127,116:4480,4121:-700.946,-336.156,-297.925,-365.143,0,-330.224	1/1:259:0,258,1:0:0:258,1:9046,36:-813.775,-77.6657,0,-810.838,-74.3685,-810.537	1/2:119:0,62,55:0:0:62,55:2185,1958:-337.584,-159.684,-141.02,-177.999,0,-161.442	1/1:192:0,191,0:0:0:191,0:6693,0:-602.221,-57.4967,0,-602.221,-57.4967,-602.221	1/2:203:0,97,104:0:0:97,104:3403,3701:-578.712,-301.775,-272.575,-277.076,0,-245.769	1/2:19:0,5,14:0:0:5,14:179,491:-54.906,-40.3067,-38.8015,-14.9552,0,-10.7408	1/2:219:0,99,120:0:0:99,120:3521,4284:-636.559,-349.615,-319.813,-287.3,0,-251.177	1/1:14:0,14,0:0:0:14,0:499,0:-45.2458,-4.21442,0,-45.2458,-4.21442,-45.2458	1/2:21:0,7,14:0:0:7,14:252,504:-62.0456,-41.4837,-39.3765,-20.9217,0,-16.7073	1/1:186:0,186,0:0:0:186,0:6492,0:-584.38,-55.9916,0,-584.38,-55.9916,-584.38	1/2:78:0,44,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chr05	27692292	.	AAA	CAA,CAG	303216	PASS	AB=0.465211,0.532605;ABP=70.3957,62.2004;AC=138,50;AF=0.734043,0.265957;AN=188;AO=8443,3434;CIGAR=1X2M,1X1M1X;DP=11899;DPB=11899;DPRA=0,2.06517;EPP=168.025,7364.61;EPPR=3.44459;GTI=1;LEN=1,3;MEANALT=1.80851,2.25;MQM=56.5209,59.8995;MQMR=60;NS=94;NUMALT=2;ODDS=0.135588;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=301134,121411;QR=152;RO=5;RPL=3821,11;RPP=168.025,7364.61;RPPR=3.44459;RPR=4622,3423;RUN=1,1;SAF=8443,3434;SAP=18336.8,7459.85;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:37:0,37,0:0:0:37,0:1317,0:-118.702,-11.1381,0,-118.702,-11.1381,-118.702	1/1:16:0,16,0:0:0:16,0:572,0:-51.5741,-4.81648,0,-51.5741,-4.81648,-51.5741	1/1:74:0,74,0:0:0:74,0:2616,0:-234.836,-22.2762,0,-234.836,-22.2762,-234.836	1/1:65:0,65,0:0:0:65,0:2320,0:-208.929,-19.567,0,-208.929,-19.567,-208.929	1/2:44:0,24,20:0:0:24,20:864,718:-129.42,-58.9278,-51.703,-70.8511,0,-64.8305	1/2:14:0,6,8:0:0:6,8:216,286:-41.2826,-23.6772,-21.8711,-17.9639,0,-15.5557	1/2:27:0,12,15:0:0:12,15:432,530:-78.7683,-43.5163,-39.904,-35.6088,0,-31.0934	1/1:35:0,35,0:0:0:35,0:1233,0:-110.808,-10.5361,0,-110.808,-10.5361,-110.808	1/2:45:0,21,24:0:0:21,24:747,850:-130.393,-69.5759,-63.2542,-61.1719,0,-53.9472	1/1:14:0,14,0:0:0:14,0:491,0:-44.5197,-4.21442,0,-44.5197,-4.21442,-44.5197	1/1:120:0,120,0:0:0:120,0:4299,0:-387.075,-36.1236,0,-387.075,-36.1236,-387.075	1/1:22:0,22,0:0:0:22,0:792,0:-71.5319,-6.62266,0,-71.5319,-6.62266,-71.5319	1/2:17:0,10,7:0:0:10,7:356,240:-48.8176,-19.8264,-16.8161,-29.3392,0,-27.232	1/2:26:0,12,14:0:0:12,14:423,495:-74.4654,-40.0372,-36.4248,-34.7786,0,-30.5642	1/2:16:0,12,4:0:0:12,4:428,142:-46.8163,-11.9251,-8.31273,-35.2464,0,-34.0423	1/1:29:0,29,0:0:0:29,0:1036,0:-93.5506,-8.72987,0,-93.5506,-8.72987,-93.5506	1/2:13:0,8,5:0:0:8,5:288,180:-38.5165,-15.0469,-12.6387,-23.8292,0,-22.3241	1/1:12:0,12,0:0:0:12,0:428,0:-38.7491,-3.61236,0,-38.7491,-3.61236,-38.7491	1/2:42:0,13,29:0:0:13,29:464,1029:-121.975,-84.1913,-80.2779,-38.1395,0,-29.4097	1/2:80:0,35,45:0:0:35,45:1260,1567:-230.578,-127.763,-117.227,-103.169,0,-89.6231	1/2:44:0,26,18:0:0:26,18:928,633:-127.258,-51.8783,-44.0515,-75.7327,0,-70.3141	1/2:85:0,20,65:0:0:20,65:720,2323:-248.359,-189.763,-183.743,-58.9546,0,-39.3877	1/2:54:0,20,34:0:0:20,34:716,1203:-156.73,-98.3395,-92.3189,-58.7471,0,-48.5121	1/2:22:0,18,4:0:0:18,4:648,127:-63.4367,-10.5391,-5.12059,-53.2227,0,-52.0185	1/1:77:0,77,0:0:0:77,0:2752,0:-247.839,-23.1793,0,-247.839,-23.1793,-247.839	1/1:95:0,95,0:0:0:95,0:3384,0:-303.6,-28.5979,0,-303.6,-28.5979,-303.6	1/1:88:0,87,1:0:0:87,1:3097,36:-278.555,-26.1896,0,-275.618,-22.8934,-275.317	1/2:6:0,3,3:0:0:3,3:108,108:-17.9843,-9.17208,-8.26899,-9.17208,0,-8.26899	1/2:135:0,67,66:0:0:67,66:2381,2334:-383.666,-190.129,-169.96,-193.57,0,-173.702	1/1:59:0,54,5:0:0:54,5:1944,180:-174.824,-16.2556,0,-160.137,-1.20871,-158.631	1/1:14:0,14,0:0:0:14,0:504,0:-45.6981,-4.21442,0,-45.6981,-4.21442,-45.6981	1/2:563:0,246,315:0:0:246,315:8756,11222:-1627.87,-914.689,-840.635,-713.173,0,-618.349	1/1:460:0,460,0:0:0:460,0:16410,0:-1476.13,-138.474,0,-1476.13,-138.474,-1476.13	1/1:759:0,757,1:0:0:757,1:26977,36:-2422.45,-227.88,0,-2419.52,-224.897,-2419.22	1/1:1214:4,1205,4:4:116:1205,4:42890,144:-3839.35,-353.537,0,-3828.81,-350.966,-3836.84	1/1:656:0,656,0:0:0:656,0:23420,0:-2103.52,-197.476,0,-2103.52,-197.476,-2103.52	1/2:23:0,9,14:0:0:9,14:324,504:-67.8713,-41.4837,-38.7744,-26.7471,0,-22.5327	1/1:66:0,66,0:0:0:66,0:2368,0:-213.377,-19.868,0,-213.377,-19.868,-213.377	1/1:104:0,104,0:0:0:104,0:3697,0:-331.982,-31.3071,0,-331.982,-31.3071,-331.982	1/2:455:0,212,243:0:0:212,243:7558,8538:-1311.3,-695.275,-631.457,-616.376,0,-543.226	1/2:55:0,24,31:0:0:24,31:856,1106:-160.28,-90.5179,-83.2932,-70.1188,0,-60.7868	1/1:66:0,66,0:0:0:66,0:2360,0:-212.621,-19.868,0,-212.621,-19.868,-212.621	1/2:115:0,44,69:0:0:44,69:1580,2444:-327.991,-199.155,-185.91,-128.904,0,-108.133	1/2:7:0,2,5:0:0:2,5:72,180:-20.9217,-15.0469,-14.4449,-6.23466,0,-4.72951	1/1:10:0,10,0:0:0:10,0:360,0:-32.7336,-3.0103,0,-32.7336,-3.0103,-32.7336	1/1:60:0,60,0:0:0:60,0:2160,0:-194.21,-18.0618,0,-194.21,-18.0618,-194.21	1/2:42:0,15,27:0:0:15,27:540,932:-119.975,-76.0616,-71.5462,-44.2674,0,-36.1396	1/1:92:0,89,3:0:0:89,3:3184,100:-286.397,-26.7917,0,-278.304,-18.3649,-277.401	1/2:48:0,34,14:0:0:34,14:1205,499:-139.128,-41.0312,-30.7961,-98.4521,0,-94.2377	1/1:34:0,34,0:0:0:34,0:1199,0:-108.204,-10.235,0,-108.204,-10.235,-108.204	1/2:50:0,24,26:0:0:24,26:860,901:-143.415,-73.5752,-66.3505,-70.1921,0,-62.3653	1/2:550:0,255,293:0:0:255,293:9088,10311:-1580.06,-839.379,-762.616,-740.718,0,-652.517	1/2:66:0,22,44:0:0:22,44:788,1554:-191.071,-126.906,-120.283,-64.5212,0,-51.2759	1/1:32:0,32,0:0:0:32,0:1128,0:-101.564,-9.63296,0,-101.564,-9.63296,-101.564	1/2:441:1,198,242:1:36:198,242:7057,8547:-1267.03,-693.092,-636.425,-571.292,0,-501.38	1/1:47:0,47,0:0:0:47,0:1674,0:-150.904,-14.1484,0,-150.904,-14.1484,-150.904	1/2:13:0,7,6:0:0:7,6:248,214:-38.0032,-17.8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chr05	27898096	.	CTTTTCCA	CTTTCCA	51304.7	PASS	AB=0.497715;ABP=3.29812;AC=50;AF=0.265957;AN=188;AO=3177;CIGAR=1M1D6M;DP=12061;DPB=11661.6;DPRA=1.11583;EPP=6901.78;EPPR=19133.7;GTI=0;LEN=1;MEANALT=1.56897;MQM=59.3894;MQMR=59.9548;NS=94;NUMALT=1;ODDS=8.45398;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111267;QR=309001;RO=8814;RPL=0;RPP=6901.78;RPPR=19133.7;RPR=3177;RUN=1;SAF=0;SAP=6901.78;SAR=3177;SRF=0;SRP=19142.4;SRR=8814;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/0:22:22,0:22:768:0:0:0,-6.62266,-69.4413	0/1:198:123,75:123:4317:75:2676:-181.389,0,-329.11	0/0:179:175,0:175:6163:0:0:0,-52.6802,-554.403	0/0:337:336,0:336:11775:0:0:0,-101.146,-1059.28	0/1:131:69,62:69:2397:62:2175:-156.311,0,-176.556	0/1:89:41,47:41:1435:47:1642:-121.313,0,-102.703	0/1:233:100,131:100:3490:131:4537:-338.516,0,-244.494	0/0:165:157,0:157:5495:0:0:0,-47.2617,-494.348	0/1:78:40,38:40:1401:38:1341:-97.365,0,-102.906	0/0:172:165,0:165:5811:0:0:0,-49.6699,-522.649	0/0:66:66,0:66:2312:0:0:0,-19.868,-208.343	0/0:44:44,0:44:1543:0:0:0,-13.2453,-139.163	0/1:46:24,22:24:829:22:780:-56.6757,0,-61.0773	0/1:61:38,23:38:1320:23:792:-53.2029,0,-100.736	0/1:40:19,21:19:665:21:748:-55.6041,0,-48.1338	0/0:30:30,0:30:1060:0:0:0,-9.0309,-95.7124	0/1:58:29,29:29:1028:29:1028:-75.3733,0,-75.3738	0/0:35:34,0:34:1182:0:0:0,-10.235,-106.325	0/1:21:11,10:11:380:10:333:-23.97,0,-28.2102	0/1:432:255,177:255:9026:177:6210:-428.882,0,-682.293	0/1:191:72,119:72:2514:119:4212:-321.683,0,-169.017	0/1:213:76,136:76:2679:136:4782:-366.269,0,-177.289	0/1:46:25,21:25:878:21:748:-53.7979,0,-65.4905	0/0:103:99,4:99:3491:4:136:0,-18.4306,-301.832	0/0:99:99,0:99:3487:0:0:0,-29.802,-314.047	0/0:470:466,0:466:16301:0:0:0,-140.28,-1466.46	0/0:325:324,0:324:11373:0:0:0,-97.5337,-1023.13	0/1:17:8,9:8:277:9:324:-24.3883,0,-20.1487	0/1:494:226,267:226:7890:267:9400:-697.175,0,-561.405	0/0:219:213,5:213:7473:5:161:0,-51.1715,-657.824	0/0:121:120,1:120:4217:1:32:0,-33.2253,-376.513	0/1:5:2,3:2:72:3:104:-8.19766,0,-5.33157	0/0:25:25,0:25:886:0:0:0,-7.52575,-80.059	0/0:24:24,0:24:846:0:0:0,-7.22472,-76.4601	0/0:13:13,0:13:454:0:0:0,-3.91339,-41.1923	0/0:21:21,0:21:731:0:0:0,-6.32163,-66.0868	0/1:132:65,64:65:2280:64:2241:-162.734,0,-166.278	0/0:218:218,0:218:7684:0:0:0,-65.6245,-691.613	0/0:58:58,0:58:2037:0:0:0,-17.4597,-183.604	0/1:36:29,7:29:1026:7:240:-11.0859,0,-81.8165	0/1:284:165,119:165:5798:119:4207:-292.835,0,-436.453	0/0:25:25,0:25:891:0:0:0,-7.52575,-80.5102	0/1:232:131,100:131:4562:100:3523:-247.521,0,-341.007	0/1:42:18,23:18:638:23:820:-61.4225,0,-45.0486	0/0:45:45,0:45:1574:0:0:0,-13.5463,-141.95	0/0:78:78,0:78:2726:0:0:0,-23.4803,-245.589	0/1:255:139,115:139:4885:115:4034:-286.144,0,-362.998	0/0:233:231,1:231:8099:1:32:0,-66.9596,-725.752	0/1:145:60,85:60:2075:85:2967:-223.424,0,-143.372	0/0:189:189,0:189:6663:0:0:0,-56.8947,-599.762	0/1:229:135,91:135:4747:91:3182:-218.192,0,-358.998	0/1:18:9,9:9:320:9:320:-23.7238,0,-23.7241	0/1:241:94,146:94:3304:146:5087:-385.124,0,-224.978	0/0:82:82,0:82:2880:0:0:0,-24.6845,-259.441	0/1:24:13,11:13:452:11:388:-27.9874,0,-33.7869	0/0:233:231,0:231:8116:0:0:0,-69.5379,-730.145	0/1:33:17,15:17:586:15:524:-37.4975,0,-43.072	0/1:12:6,6:6:201:6:197:-14.4307,0,-14.8062	0/0:59:59,0:59:2090:0:0:0,-17.7608,-188.371	0/0:104:104,0:104:3599:0:0:0,-31.3071,-324.123	0/1:96:45,51:45:1587:51:1774:-130.998,0,-114.222	0/1:12:3,9:3:107:9:308:-24.4108,0,-6.36981	0/0:336:334,0:334:11686:0:0:0,-100.544,-1051.27	0/1:333:168,165:168:5876:165:5767:-418.578,0,-428.714	0/1:75:33,42:33:1150:42:1458:-108.929,0,-81.228	0/1:169:69,98:69:2374:98:3398:-255.05,0,-163.287	0/0:154:150,3:150:5203:3:104:0,-36.7113,-458.711	0/0:156:156,0:156:5468:0:0:0,-46.9607,-492.249	0/1:24:15,8:15:532:8:273:-17.6993,0,-41.0218	0/1:104:62,40:62:2181:40:1408:-95.955,0,-165.588	0/1:77:39,37:39:1341:37:1282:-92.4244,0,-97.7505	0/0:70:70,0:70:2415:0:0:0,-21.0721,-217.61	0/1:193:97,95:97:3403:95:3336:-242.246,0,-248.325	0/0:51:51,0:51:1797:0:0:0,-15.3525,-162.013	0/0:188:188,0:188:6569:0:0:0,-56.5936,-591.31	0/0:252:249,1:249:8787:1:36:0,-72.0006,-787.28	0/1:227:104,120:104:3655:120:4163:-306.816,0,-261.446	0/0:148:145,3:145:5101:3:104:0,-34.8496,-449.541	0/1:12:4,8:4:134:8:265:-20.5597,0,-8.77857	0/0:175:172,1:172:6020:1:36:0,-48.8397,-538.309	0/1:211:106,104:106:3725:104:3632:-262.956,0,-271.885	0/1:337:170,166:170:5942:166:5809:-421.104,0,-433.4	0/1:77:42,34:42:1468:34:1159:-81.3171,0,-109.179	0/1:35:11,24:11:386:24:828:-64.255,0,-24.5401	0/0:58:58,0:58:2039:0:0:0,-17.4597,-183.782	0/1:87:41,46:41:1435:46:1644:-122.04,0,-103.257	0/1:30:19,11:19:676:11:392:-26.5892,0,-52.1291	0/0:51:50,0:50:1729:0:0:0,-15.0515,-155.536	0/1:61:32,28:32:1117:28:976:-69.7238,0,-82.4163	0/0:27:27,0:27:944:0:0:0,-8.12781,-85.2697	0/1:119:48,71:48:1678:71:2484:-187.962,0,-115.485	0/1:30:10,20:10:353:20:708:-55.0032,0,-23.0785	0/0:198:196,0:196:6873:0:0:0,-59.0019,-618.299	0/0:58:58,0:58:2051:0:0:0,-17.4597,-184.863
chr05	27965390	.	A	G	49793.2	PASS	AB=0.5034;ABP=3.60098;AC=50;AF=0.265957;AN=188;AO=2982;CIGAR=1X;DP=13119;DPB=13119;DPRA=1.04623;EPP=6434.98;EPPR=21777;GTI=0;LEN=1;MEANALT=1.0339;MQM=50.9916;MQMR=59.4849;NS=94;NUMALT=1;ODDS=15.8042;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=106681;QR=363415;RO=10135;RPL=5;RPP=6434.98;RPPR=21777;RPR=2977;RUN=1;SAF=2982;SAP=6478.34;SAR=0;SRF=10135;SRP=22010.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:128:128,0:128:4584:0:0:0,-38.5318,-412.602	0/1:81:43,38:43:1532:38:1351:-96.4937,0,-113.737	0/0:226:226,0:226:8112:0:0:0,-68.0328,-729.958	0/0:268:268,0:268:9613:0:0:0,-80.676,-864.945	0/1:77:46,31:46:1656:31:1112:-76.5439,0,-126.138	0/1:34:23,11:23:813:11:392:-25.2005,0,-63.2535	0/1:85:54,31:54:1917:31:1108:-73.7702,0,-146.972	0/0:314:313,1:313:11236:1:36:0,-90.9446,-1007.27	0/1:157:61,96:61:2188:96:3422:-258.617,0,-149.825	0/0:84:84,0:84:2993:0:0:0,-25.2865,-269.502	0/0:115:115,0:115:4128:0:0:0,-34.6184,-371.672	0/0:142:142,0:142:5112:0:0:0,-42.7463,-460.019	0/1:146:86,60:86:3096:60:2160:-148.461,0,-234.87	0/1:103:53,49:53:1904:49:1764:-126.222,0,-140.291	0/1:116:49,67:49:1764:67:2408:-180.824,0,-124.112	0/0:74:74,0:74:2664:0:0:0,-22.2762,-239.955	0/1:39:18,21:18:648:21:755:-55.7769,0,-46.9117	0/0:60:60,0:60:2160:0:0:0,-18.0618,-194.66	0/1:60:33,27:33:1184:27:956:-67.6975,0,-88.7713	0/1:142:70,71:70:2516:71:2521:-183.239,0,-183.875	0/1:294:131,163:131:4699:163:5839:-433.92,0,-333.745	0/1:85:32,53:32:1137:53:1904:-145.854,0,-77.0285	0/1:207:111,96:111:3969:96:3448:-247.11,0,-294.676	0/0:86:80,6:80:2868:6:216:0,-6.17,-238.549	0/0:104:104,0:104:3709:0:0:0,-31.3071,-333.914	0/0:328:328,0:328:11741:0:0:0,-98.7378,-1056.49	0/0:380:378,2:378:13569:2:72:0,-107.577,-1213.67	0/1:43:20,23:20:720:23:828:-61.4201,0,-52.1845	0/1:331:177,154:177:6333:154:5518:-394.634,0,-470.394	0/0:182:179,3:179:6417:3:108:0,-44.7525,-567.452	0/0:194:194,0:194:6956:0:0:0,-58.3998,-625.826	0/1:48:28,20:28:1008:20:720:-50.2509,0,-76.5549	0/0:54:54,0:54:1928:0:0:0,-16.2556,-173.752	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.902	0/0:65:65,0:65:2304:0:0:0,-19.5669,-206.378	0/0:83:83,0:83:2988:0:0:0,-24.9855,-269.056	0/1:204:118,86:118:4240:86:3079:-215.184,0,-319.485	0/0:238:238,0:238:8533:0:0:0,-71.6451,-767.653	0/0:99:99,0:99:3564:0:0:0,-29.802,-320.912	0/1:16:8,8:8:288:8:288:-21.3302,0,-21.4509	0/1:116:66,50:66:2368:50:1787:-124.613,0,-178.426	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.753	0/1:216:95,121:95:3378:121:4312:-320.667,0,-239.201	0/1:76:28,48:28:1004:48:1709:-130.468,0,-66.9393	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.692	0/0:218:217,1:217:7785:1:36:0,-62.03,-697.04	0/1:149:76,73:76:2732:73:2580:-185.636,0,-201.269	0/0:392:391,1:391:14021:1:36:0,-114.412,-1257.5	0/1:114:51,63:51:1832:63:2256:-168.21,0,-130.69	0/0:484:481,3:481:17251:3:108:0,-135.643,-1541.96	0/1:27:18,9:18:644:9:324:-21.3476,0,-50.1561	0/1:29:12,17:12:432:17:608:-46.0683,0,-30.4913	0/1:121:53,68:53:1904:68:2432:-181.237,0,-135.187	0/0:87:87,0:87:3101:0:0:0,-26.1896,-279.306	0/1:21:6,15:6:216:15:540:-42.2607,0,-13.4689	0/0:170:170,0:170:6112:0:0:0,-51.1751,-549.757	0/1:69:33,36:33:1184:36:1273:-93.7332,0,-86.0454	0/1:30:17,13:17:612:13:464:-32.8153,0,-46.3825	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5561	0/0:233:233,0:233:8338:0:0:0,-70.14,-750.178	0/1:104:57,47:57:2052:47:1680:-119.291,0,-153.589	0/1:49:29,20:29:1040:20:716:-49.8581,0,-79.1577	0/0:202:202,0:202:7244:0:0:0,-60.8081,-651.978	0/1:414:203,211:203:7280:211:7553:-553.187,0,-530.088	0/1:112:47,65:47:1669:65:2324:-174.875,0,-116.767	0/1:76:41,35:41:1476:35:1247:-89.4445,0,-110.24	0/0:261:260,1:260:9306:1:36:0,-74.9774,-833.686	0/0:198:198,0:198:7104:0:0:0,-59.6039,-639.343	0/1:75:41,34:41:1476:34:1216:-86.5901,0,-110.35	0/1:74:45,29:45:1620:29:1028:-70.0355,0,-123.8	0/1:66:37,29:37:1317:29:1044:-74.2068,0,-98.9552	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.956	0/1:183:88,95:88:3164:95:3401:-248.421,0,-229.877	0/0:180:180,0:180:6456:0:0:0,-54.1854,-580.19	0/0:366:366,0:366:13121:0:0:0,-110.177,-1178.85	0/0:115:115,0:115:4124:0:0:0,-34.6184,-371.316	0/1:213:102,111:102:3656:111:3955:-289.861,0,-265.085	0/0:173:170,3:170:6092:3:108:0,-42.0576,-538.203	0/1:71:24,47:24:856:47:1684:-128.806,0,-55.9834	0/0:120:120,0:120:4301:0:0:0,-36.1236,-387.085	0/1:135:62,73:62:2198:73:2616:-192.019,0,-157.16	0/1:340:195,145:195:6981:145:5192:-363.929,0,-524.638	0/1:65:31,34:31:1108:34:1216:-89.798,0,-79.8931	0/1:102:44,58:44:1584:58:2084:-156.467,0,-112.146	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.012	0/1:177:84,93:84:3005:93:3336:-245.952,0,-217.366	0/1:28:12,16:12:432:16:572:-42.3357,0,-30.7569	0/0:93:93,0:93:3344:0:0:0,-27.9958,-301.061	0/1:81:36,45:36:1296:45:1620:-120.496,0,-91.2856	0/0:108:108,0:108:3880:0:0:0,-32.5112,-349.343	0/1:178:90,88:90:3240:88:3143:-227.715,0,-238.194	0/1:103:35,68:35:1256:68:2440:-188.23,0,-82.3243	0/0:163:163,0:163:5860:0:0:0,-49.0679,-527.367	0/0:151:151,0:151:5424:0:0:0,-45.4555,-488.088
chr05	28421519	.	G	A	39087.5	PASS	AB=0.493026;ABP=5.00923;AC=50;AF=0.265957;AN=188;AO=2348;CIGAR=1X;DP=8938;DPB=8938;DPRA=1.27792;EPP=4349.86;EPPR=13726.1;GTI=0;LEN=1;MEANALT=1.03448;MQM=39.9983;MQMR=59.9309;NS=94;NUMALT=1;ODDS=1.85586;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=84195;QR=235075;RO=6585;RPL=90;RPP=4349.86;RPPR=13726.1;RPR=2258;RUN=1;SAF=2348;SAP=5101.63;SAR=0;SRF=6585;SRP=14302.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:134:63,71:63:2233:71:2548:-180.87,0,-160.893	0/0:138:137,0:137:4894:0:0:0,-41.2411,-440.252	0/0:210:209,1:209:7453:1:36:0,-59.7927,-667.354	0/1:62:31,31:31:1108:31:1116:-78.1917,0,-81.3671	0/1:49:35,14:35:1235:14:489:-27.5226,0,-96.703	0/0:192:192,0:192:6859:0:0:0,-57.7978,-617.295	0/0:126:126,0:126:4482:0:0:0,-37.9298,-403.456	0/1:89:43,46:43:1544:46:1652:-117.411,0,-112.453	0/0:97:97,0:97:3451:0:0:0,-29.1999,-310.717	0/0:77:77,0:77:2764:0:0:0,-23.1793,-248.997	0/0:91:91,0:91:3232:0:0:0,-27.3937,-291.101	0/1:72:36,36:36:1284:36:1292:-90.0923,0,-94.1893	0/1:74:34,40:34:1200:40:1436:-102.133,0,-86.0266	0/1:65:35,30:35:1256:30:1080:-70.3939,0,-93.7783	0/0:59:59,0:59:2103:0:0:0,-17.7608,-189.534	0/1:83:35,48:35:1245:48:1728:-124.068,0,-87.3591	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/1:61:29,32:29:1035:32:1144:-81.8417,0,-75.1002	0/1:202:106,96:106:3793:96:3456:-234.134,0,-280.758	0/1:164:99,65:99:3527:65:2340:-152.855,0,-268.269	0/1:94:38,56:38:1325:56:2008:-144.389,0,-91.232	0/1:57:23,34:23:816:34:1224:-88.1482,0,-56.603	0/0:81:81,0:81:2888:0:0:0,-24.3834,-260.153	0/0:63:63,0:63:2247:0:0:0,-18.9649,-202.486	0/0:256:253,3:253:9040:3:108:0,-66.9885,-803.504	0/0:122:122,0:122:4358:0:0:0,-36.7257,-392.394	0/1:44:19,25:19:669:25:896:-63.9698,0,-47.284	0/1:240:123,115:123:4370:115:4099:-278.444,0,-321.471	0/0:166:162,4:162:5771:4:144:0,-37.1651,-506.565	0/0:148:147,0:147:5235:0:0:0,-44.2514,-470.557	0/1:11:1,10:1:36:10:356:-27.8348,0,-0.286945	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:9:9,0:9:316:0:0:0,-2.70927,-28.7789	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3779	0/0:18:18,0:18:631:0:0:0,-5.41854,-57.1101	0/1:169:73,96:73:2608:96:3448:-243.513,0,-184.093	0/0:126:126,0:126:4482:0:0:0,-37.9298,-403.551	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.759	0/1:9:7,2:7:252:2:72:-3.85426,0,-20.3197	0/1:165:80,85:80:2859:85:3042:-211.365,0,-207.877	0/0:52:52,0:52:1863:0:0:0,-15.6536,-167.944	0/1:105:54,51:54:1924:51:1828:-126.193,0,-141.829	0/1:142:77,65:77:2768:65:2336:-155.532,0,-206.604	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/1:152:81,71:81:2908:71:2544:-172.194,0,-216.19	0/0:175:175,0:175:6246:0:0:0,-52.6802,-562.227	0/1:121:70,51:70:2508:51:1832:-121.155,0,-189.548	0/0:141:140,1:140:4994:1:36:0,-39.0216,-446.14	0/1:168:94,74:94:3380:74:2656:-176.695,0,-253.833	0/1:7:4,3:4:135:3:108:-7.25863,0,-10.3753	0/1:138:86,52:86:3080:52:1849:-118.551,0,-235.886	0/0:52:52,0:52:1856:0:0:0,-15.6536,-167.32	0/1:19:5,14:5:176:14:504:-37.8099,0,-10.4654	0/0:147:147,0:147:5280:0:0:0,-44.2514,-475.329	0/1:23:11,12:11:392:12:428:-30.3055,0,-28.6964	0/1:9:5,4:5:180:4:144:-9.95806,0,-13.8428	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:56:56,0:56:1992:0:0:0,-16.8577,-179.551	0/1:143:82,61:82:2939:61:2183:-144.246,0,-221.696	0/1:6:4,2:4:144:2:72:-4.69866,0,-11.5074	0/0:162:162,0:162:5787:0:0:0,-48.7669,-520.945	0/1:147:80,67:80:2855:67:2408:-160.483,0,-212.934	0/1:59:25,34:25:892:34:1224:-87.1721,0,-62.8389	0/1:79:34,45:34:1209:45:1616:-113.388,0,-85.3297	0/0:176:174,2:174:6195:2:72:0,-46.4764,-551.118	0/0:113:112,1:112:3987:1:36:0,-30.5928,-355.597	0/1:38:18,20:18:644:20:720:-51.0871,0,-46.8515	0/1:119:62,57:62:2216:57:2052:-141.208,0,-163.874	0/1:79:31,48:31:1103:48:1724:-123.975,0,-75.7984	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:113:62,50:62:2199:50:1792:-121.264,0,-164.092	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/0:154:154,0:154:5511:0:0:0,-46.3586,-496.116	0/1:190:107,83:107:3828:83:2984:-197.666,0,-287.517	0/1:74:22,52:22:784:52:1864:-139.583,0,-48.6077	0/0:88:88,0:88:3148:0:0:0,-26.4906,-283.546	0/1:24:10,14:10:352:14:504:-36.9801,0,-24.7935	0/0:124:123,1:123:4396:1:36:0,-33.8732,-392.359	0/1:128:70,58:70:2504:58:2076:-142.762,0,-187.08	0/1:178:93,85:93:3316:85:3028:-201.76,0,-245.076	0/1:92:45,47:45:1600:47:1684:-116.722,0,-116.595	0/1:69:36,33:36:1292:33:1188:-79.8526,0,-95.8042	0/0:86:86,0:86:3050:0:0:0,-25.8886,-274.723	0/1:125:69,56:69:2468:56:2012:-133.75,0,-184.745	0/1:57:28,29:28:1008:29:1044:-73.8242,0,-73.8776	0/0:79:79,0:79:2827:0:0:0,-23.7814,-254.668	0/1:73:37,36:37:1332:36:1279:-89.8276,0,-98.2072	0/0:49:49,0:49:1728:0:0:0,-14.7505,-155.802	0/1:97:49,48:49:1742:48:1714:-116.071,0,-127.863	0/1:114:35,79:35:1256:79:2832:-208.699,0,-79.0217	0/0:86:86,0:86:3080:0:0:0,-25.8886,-277.342	0/0:98:96,2:96:3440:2:72:0,-22.9961,-303.308
chr05	28421530	.	CCGC	CGGG,CGGGTGG	180176	PASS	AB=0.510643,0.478927;ABP=7.63242,21.1309;AC=138,50;AF=0.734043,0.265957;AN=188;AO=6611,2262;CIGAR=1M1X1M1X,1M3I1X1M1X;DP=8947;DPB=10657.8;DPRA=0,1.16239;EPP=14349.9,4914.88;EPPR=0;GTI=2;LEN=4,7;MEANALT=2.28723,2.85965;MQM=59.9156,39.3435;MQMR=0;NS=94;NUMALT=2;ODDS=0.106446;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=230166,79128;QR=0;RO=0;RPL=6610,2262;RPP=14349.9,4914.88;RPPR=0;RPR=1,0;RUN=1,1;SAF=6611,2262;SAP=14358.6,4914.88;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:25:0,25,0:0:0:25,0:874,0:-78.9757,-7.52575,0,-78.9757,-7.52575,-78.9757	1/2:127:0,59,67:0:0:59,67:2067,2343:-351.771,-183.579,-165.818,-168.177,0,-148.008	1/1:141:0,141,0:0:0:141,0:4900,0:-441.16,-42.4452,0,-441.16,-42.4452,-441.16	1/1:215:0,213,1:0:0:213,1:7442,36:-669.527,-64.1194,0,-666.747,-61.3072,-666.446	1/2:61:0,29,29:0:0:29,29:1017,1038:-163.779,-81.0162,-72.2863,-82.7558,0,-74.0259	1/2:50:0,36,14:0:0:36,14:1272,495:-142.211,-38.6076,-27.7705,-103.945,0,-99.7304	1/1:193:0,189,0:0:0:189,0:6522,0:-586.748,-56.8947,0,-586.748,-56.8947,-586.748	1/1:128:0,127,0:0:0:127,0:4382,0:-394.256,-38.2308,0,-394.256,-38.2308,-394.256	1/2:87:0,43,44:0:0:43,44:1493,1526:-241.707,-120.336,-107.392,-121.713,0,-108.468	1/1:98:0,96,0:0:0:96,0:3374,0:-303.567,-28.8989,0,-303.567,-28.8989,-303.567	1/1:75:0,75,0:0:0:75,0:2607,0:-234.879,-22.5773,0,-234.879,-22.5773,-234.879	1/1:92:0,92,0:0:0:92,0:3132,0:-282.107,-27.6948,0,-282.107,-27.6948,-282.107	1/2:70:0,36,33:0:0:36,33:1251,1151:-191.229,-89.5164,-78.6794,-101.781,0,-91.8467	1/2:73:0,35,38:0:0:35,38:1214,1308:-201.066,-102.45,-91.9137,-98.9557,0,-87.5165	1/2:67:0,37,30:0:0:37,30:1303,1045:-184.576,-78.5868,-67.4487,-106.326,0,-97.2946	1/1:60:0,60,0:0:0:60,0:2083,0:-187.736,-18.0618,0,-187.736,-18.0618,-187.736	1/2:86:0,39,47:0:0:39,47:1327,1636:-234.291,-127.276,-115.536,-107.351,0,-93.2024	1/1:54:0,54,0:0:0:54,0:1912,0:-172.357,-16.2556,0,-172.357,-16.2556,-172.357	1/2:57:0,27,30:0:0:27,30:955,1060:-161.599,-83.8098,-75.6819,-78.138,0,-69.1071	1/2:201:0,106,91:0:0:106,91:3749,3187:-551.467,-246.107,-214.197,-305.418,0,-278.025	1/2:164:0,99,64:0:0:99,64:3448,2229:-454.314,-173.925,-144.123,-280.385,0,-261.119	1/2:90:0,38,51:0:0:38,51:1286,1780:-241.623,-137.374,-125.935,-104.227,0,-88.8741	1/2:52:0,22,30:0:0:22,30:773,1049:-144.343,-81.4184,-74.7957,-63.2682,0,-54.2373	1/1:81:0,81,0:0:0:81,0:2865,0:-258.083,-24.3834,0,-258.083,-24.3834,-258.083	1/1:62:0,61,0:0:0:61,0:2135,0:-192.203,-18.3628,0,-192.203,-18.3628,-192.203	1/1:262:0,261,0:0:0:261,0:9064,0:-815.398,-78.5688,0,-815.398,-78.5688,-815.398	1/1:122:0,122,0:0:0:122,0:4229,0:-380.793,-36.7257,0,-380.793,-36.7257,-380.793	1/2:43:0,18,25:0:0:18,25:614,888:-119.017,-69.1968,-63.7783,-50.1603,0,-42.6346	1/2:233:0,124,105:0:0:124,105:4333,3677:-634.074,-281.591,-244.263,-352.479,0,-320.871	1/1:166:0,160,4:0:0:160,4:5655,137:-508.607,-48.1648,0,-497.859,-37.4277,-496.654	1/1:145:0,145,0:0:0:145,0:5003,0:-450.32,-43.6494,0,-450.32,-43.6494,-450.32	1/2:11:0,1,10:0:0:1,10:36,351:-30.6781,-27.7387,-27.4377,-3.29724,0,-0.286945	1/1:11:0,11,0:0:0:11,0:385,0:-34.9849,-3.31133,0,-34.9849,-3.31133,-34.9849	1/1:9:0,9,0:0:0:9,0:315,0:-28.6884,-2.70927,0,-28.6884,-2.70927,-28.6884	1/1:11:0,11,0:0:0:11,0:364,0:-33.0756,-3.31133,0,-33.0756,-3.31133,-33.0756	1/1:18:0,15,0:0:0:15,0:506,0:-45.5257,-4.51545,0,-45.5257,-4.51545,-45.5257	1/2:169:0,74,95:0:0:74,95:2539,3331:-463.627,-257.482,-235.206,-206.484,0,-177.886	1/1:127:0,126,0:0:0:126,0:4417,0:-397.396,-37.9298,0,-397.396,-37.9298,-397.396	1/1:81:0,81,0:0:0:81,0:2818,0:-253.861,-24.3834,0,-253.861,-24.3834,-253.861	1/2:9:0,7,2:0:0:7,2:234,72:-24.8978,-5.96147,-3.85426,-19.2793,0,-18.6772	1/2:164:0,77,83:0:0:77,83:2709,2920:-446.462,-226.063,-202.884,-220.4,0,-195.415	1/1:55:0,54,0:0:0:54,0:1871,0:-168.367,-16.2556,0,-168.367,-16.2556,-168.367	1/2:104:0,52,51:0:0:52,51:1822,1766:-285.692,-137.43,-121.777,-148.244,0,-132.891	1/2:141:0,78,63:0:0:78,63:2722,2203:-389.816,-168.412,-144.932,-221.743,0,-202.778	1/1:69:0,69,0:0:0:69,0:2393,0:-215.628,-20.7711,0,-215.628,-20.7711,-215.628	1/1:58:0,58,0:0:0:58,0:2035,0:-183.42,-17.4597,0,-183.42,-17.4597,-183.42	1/2:151:0,79,71:0:0:79,71:2741,2506:-416.07,-193.263,-169.481,-222.79,0,-201.417	1/1:174:0,173,0:0:0:173,0:6002,0:-539.924,-52.0782,0,-539.924,-52.0782,-539.924	1/2:120:0,72,47:0:0:72,47:2497,1635:-328.899,-126.488,-104.814,-202.406,0,-188.258	1/1:144:0,141,1:0:0:141,1:4895,36:-440.329,-42.4452,0,-437.549,-39.6708,-437.248	1/2:171:0,96,71:0:0:96,71:3354,2491:-465.193,-192.365,-163.466,-272.834,0,-251.461	1/2:7:0,4,3:0:0:4,3:144,108:-20.2269,-8.46275,-7.25863,-12.1095,0,-11.2064	1/2:138:0,86,49:0:0:86,49:2995,1682:-374.942,-131.386,-105.498,-243.548,0,-228.798	1/1:52:0,52,0:0:0:52,0:1801,0:-162.368,-15.6536,0,-162.368,-15.6536,-162.368	1/2:19:0,5,13:0:0:5,13:178,459:-50.6601,-36.149,-34.6438,-14.5141,0,-10.6007	1/1:151:0,150,0:0:0:150,0:5287,0:-475.688,-45.1545,0,-475.688,-45.1545,-475.688	1/2:22: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chr05	28727307	.	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chr05	28882030	.	G	A	86820.1	PASS	AB=0.5;ABP=3.0103;AC=50;AF=0.265957;AN=188;AO=3878;CIGAR=1X;DP=14528;DPB=14528;DPRA=1.12127;EPP=8423.98;EPPR=23083.6;GTI=0;LEN=1;MEANALT=1.14286;MQM=52.0505;MQMR=51.2913;NS=94;NUMALT=1;ODDS=7.27663;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138321;QR=376946;RO=10633;RPL=1572;RPP=304.685;RPPR=6.62275;RPR=2306;RUN=1;SAF=1572;SAP=304.685;SAR=2306;SRF=5384;SRP=6.73221;SRR=5249;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:81:80,0:80:2839:0:0:0,-24.0824,-254.366	0/1:162:105,56:105:3722:56:2016:-130.402,0,-282.925	0/0:328:328,0:328:11567:0:0:0,-98.7378,-1033.62	0/0:354:353,0:353:12536:0:0:0,-106.264,-1122.61	0/1:89:34,55:34:1211:55:1957:-148.742,0,-80.6851	0/1:89:46,43:46:1637:43:1520:-109.58,0,-119.2	0/0:223:222,1:222:7909:1:36:0,-63.5563,-703.397	0/0:278:277,1:277:9772:1:36:0,-80.1076,-863.602	0/1:200:74,126:74:2621:126:4511:-343.229,0,-173.905	0/0:187:187,0:187:6678:0:0:0,-56.2926,-597.217	0/0:142:142,0:142:5052:0:0:0,-42.7463,-451.588	0/0:162:162,0:162:5675:0:0:0,-48.7669,-504.938	0/1:153:70,83:70:2479:83:2959:-218.187,0,-174.874	0/1:190:106,84:106:3745:84:2997:-210.976,0,-277.092	0/1:100:46,53:46:1648:53:1875:-138.323,0,-117.519	0/0:126:126,0:126:4441:0:0:0,-37.9298,-397.182	0/1:177:97,80:97:3406:80:2852:-201.071,0,-249.693	0/0:114:114,0:114:4057:0:0:0,-34.3174,-359.168	0/1:79:37,42:37:1332:42:1500:-110.8,0,-94.6239	0/1:228:123,105:123:4369:105:3759:-267.966,0,-322.17	0/1:184:99,85:99:3530:85:3048:-217.762,0,-259.576	0/1:93:27,66:27:953:66:2360:-183.861,0,-57.7597	0/1:98:52,46:52:1848:46:1648:-118.508,0,-136.622	0/0:115:108,7:108:3809:7:248:0,-12.0072,-316.427	0/0:86:86,0:86:3049:0:0:0,-25.8886,-272.316	0/1:379:166,213:166:5915:213:7612:-569.021,0,-416.941	0/0:406:406,0:406:14383:0:0:0,-122.218,-1282.74	0/1:54:32,22:32:1127:22:779:-54.0085,0,-84.4049	0/1:368:195,173:195:6890:173:6135:-439.539,0,-507.759	0/0:217:208,9:208:7426:9:320:0,-36.3541,-632.943	0/0:150:150,0:150:5331:0:0:0,-45.1545,-477.267	0/1:13:6,7:6:216:7:252:-19.0577,0,-15.6873	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.1071	0/0:6:6,0:6:203:0:0:0,-1.80618,-18.4812	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.2914	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.1222	0/1:306:142,164:142:5035:164:5850:-433.493,0,-358.094	0/0:106:103,2:103:3649:2:72:0,-25.1418,-318.787	0/0:114:114,0:114:4012:0:0:0,-34.3174,-357.579	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.3749	0/1:262:149,112:149:5286:112:4020:-281.56,0,-390.724	0/0:64:64,0:64:2296:0:0:0,-19.2659,-204.925	0/1:259:119,140:119:4227:140:4984:-368.036,0,-299.712	0/1:179:51,127:51:1794:127:4501:-350.724,0,-106.478	0/0:134:133,0:133:4654:0:0:0,-40.037,-415.681	0/0:127:126,1:126:4437:1:36:0,-34.6478,-394.696	0/1:179:96,83:96:3404:83:2969:-210.83,0,-248.313	0/0:289:288,1:288:10215:1:36:0,-83.4084,-910.206	0/1:151:86,65:86:3037:65:2278:-159.094,0,-225.792	0/0:216:216,0:216:7701:0:0:0,-65.0225,-688.364	0/1:180:90,89:90:3204:89:3187:-232.258,0,-233.798	0/1:17:10,7:10:351:7:252:-17.8752,0,-26.2916	0/1:166:100,66:100:3579:66:2361:-160.75,0,-268.746	0/0:84:81,3:81:2896:3:108:0,-15.2422,-249.819	0/1:24:14,10:14:504:10:360:-25.3421,0,-37.3839	0/0:187:187,0:187:6615:0:0:0,-56.2926,-591.912	0/1:33:16,17:16:568:17:612:-44.155,0,-40.589	0/1:17:5,12:5:176:12:432:-34.0556,0,-11.0193	0/0:47:47,0:47:1671:0:0:0,-14.1484,-149.1	0/0:137:137,0:137:4818:0:0:0,-41.2411,-430.286	0/1:184:97,87:97:3440:87:3122:-224.891,0,-252.835	0/1:6:4,2:4:144:2:72:-5.0257,0,-11.4524	0/0:234:234,0:234:8345:0:0:0,-70.441,-748.177	0/1:271:143,128:143:5059:128:4567:-326.336,0,-371.124	0/1:172:91,81:91:3217:81:2895:-207.702,0,-235.008	0/1:116:61,55:61:2147:55:1967:-141.88,0,-157.832	0/0:172:170,0:170:6025:0:0:0,-51.1751,-539.77	0/0:214:211,2:211:7428:2:72:0,-57.5691,-657.366	0/1:109:54,55:54:1928:55:1972:-144.363,0,-139.404	0/1:72:41,31:41:1468:31:1112:-77.8359,0,-108.465	0/1:120:79,41:79:2816:41:1456:-95.0295,0,-216.041	0/0:50:50,0:50:1791:0:0:0,-15.0515,-160.572	0/1:187:100,87:100:3540:87:3108:-221.213,0,-259.86	0/0:149:149,0:149:5306:0:0:0,-44.8535,-472.703	0/0:333:332,0:332:11762:0:0:0,-99.942,-1046.72	0/1:212:99,113:99:3524:113:4045:-299.534,0,-251.359	0/1:161:78,83:78:2788:83:2928:-213.78,0,-201.388	0/0:210:209,1:209:7464:1:21:0,-61.117,-661.382	0/1:17:9,8:9:324:8:269:-19.3045,0,-24.0617	0/0:180:179,1:179:6306:1:36:0,-50.5962,-559.739	0/1:214:131,83:131:4640:83:2975:-201.48,0,-348.551	0/1:355:181,173:181:6406:173:6179:-447.05,0,-466.864	0/1:128:70,58:70:2468:58:2064:-146.796,0,-181.727	0/1:154:79,75:79:2811:75:2663:-192.918,0,-204.004	0/0:137:136,1:136:4814:1:36:0,-37.7866,-425.916	0/1:235:115,120:115:4074:120:4264:-311.753,0,-293.669	0/1:57:32,25:32:1148:25:900:-63.4542,0,-85.4585	0/0:128:128,0:128:4528:0:0:0,-38.5318,-403.49	0/1:102:47,55:47:1648:55:1950:-144.14,0,-116.214	0/0:124:124,0:124:4366:0:0:0,-37.3277,-388.75	0/1:194:95,99:95:3363:99:3560:-260.097,0,-240.047	0/1:193:38,154:38:1338:154:5470:-433.128,0,-62.0876	0/0:163:161,0:161:5680:0:0:0,-48.4658,-508.98	0/0:229:225,4:225:8007:4:140:0,-56.0026,-704.095
chr05	28882031	.	ACA	AA	271948	PASS	AB=0.487189;ABP=13.9705;AC=138;AF=0.734043;AN=188;AO=10429;CIGAR=1M1D1M;DP=14418;DPB=10939.3;DPRA=0;EPP=22640.6;EPPR=8597.7;GTI=0;LEN=1;MEANALT=1.23404;MQM=51.2935;MQMR=52.0854;NS=94;NUMALT=1;ODDS=4.24838;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18;PQR=18;PRO=0.5;QA=367426;QR=138369;RO=3958;RPL=5297;RPP=8.67895;RPPR=341.951;RPR=5132;RUN=1;SAF=5298;SAP=8.8172;SAR=5131;SRF=1586;SRP=341.951;SRR=2372;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	1/1:85:0,85:0:0:85:2944:-263.996,-25.5876,0	0/1:159:56,102:56:1949:102:3593:-272.162,0,-126.015	1/1:316:0,316:0:0:316:11030:-987.554,-95.1255,0	1/1:347:0,347:0:0:347:12316:-1103.64,-104.457,0	0/1:90:57,33:57:1990:33:1179:-77.5257,0,-151.312	0/1:87:44,43:44:1539:43:1504:-107.944,0,-111.919	1/1:217:1,216:1:36:216:7578:-674.997,-61.7501,0	1/1:271:1,270:1:25:270:9515:-842.111,-79.0809,0	0/1:207:132,75:132:4530:75:2605:-170.613,0,-343.149	1/1:182:0,182:0:0:182:6448:-577.057,-54.7875,0	1/1:144:0,144:0:0:144:5100:-454.303,-43.3483,0	1/1:151:0,151:0:0:151:5289:-470.69,-45.4555,0	0/1:153:86,67:86:2968:67:2337:-163.104,0,-219.262	0/1:182:85,96:85:2957:96:3378:-247.243,0,-210.68	0/1:101:53,47:53:1849:47:1657:-117.04,0,-135.886	1/1:123:0,123:0:0:123:4359:-389.91,-37.0267,0	0/1:175:81,94:81:2824:94:3274:-238.916,0,-199.653	1/1:108:1,107:1:36:107:3782:-331.333,-28.913,0	0/1:74:41,33:41:1452:33:1165:-81.4867,0,-108.035	0/1:232:106,126:106:3728:126:4450:-328.905,0,-264.791	0/1:180:85,94:85:3000:94:3340:-244.946,0,-214.628	0/1:93:67,26:67:2361:26:928:-55.3505,0,-183.711	0/1:99:47,52:47:1657:52:1864:-137.743,0,-119.13	1/1:114:7,107:7:246:107:3792:-314.584,-11.8876,0	1/1:86:0,86:0:0:86:2981:-266.764,-25.8886,0	0/1:386:221,165:221:7767:165:5830:-407.384,0,-581.361	1/1:408:0,407:0:0:407:14351:-1281.41,-122.519,0	0/1:52:22,30:22:785:30:1072:-80.079,0,-55.1509	0/1:369:171,194:171:6044:194:6827:-502.777,0,-432.894	1/1:209:10,199:10:333:199:6946:-589.537,-32.8184,0	1/1:149:0,149:0:0:149:5265:-470.451,-44.8535,0	0/1:13:7,6:7:244:6:212:-15.3387,0,-18.3345	1/1:10:0,10:0:0:10:356:-31.7455,-3.0103,0	1/1:7:0,7:0:0:7:252:-22.833,-2.10721,0	1/1:8:0,8:0:0:8:284:-25.059,-2.40824,0	1/1:15:0,15:0:0:15:532:-47.6454,-4.51545,0	0/1:306:168,138:168:5927:138:4910:-347.058,0,-440.78	1/1:109:2,107:2:72:107:3761:-328.988,-25.9927,0	1/1:114:0,114:0:0:114:4060:-360.599,-34.3174,0	1/1:5:0,5:0:0:5:180:-16.3749,-1.50515,0	0/1:262:113,147:113:3969:147:5184:-382.32,0,-277.395	1/1:63:0,63:0:0:63:2223:-198.423,-18.9649,0	0/1:261:142,117:142:4938:117:4090:-287.597,0,-364.222	0/1:180:133,47:133:4644:47:1656:-93.8128,0,-363.223	1/1:132:0,132:0:0:132:4637:-415.133,-39.736,0	1/1:117:1,116:1:36:116:4062:-361.386,-31.6375,0	0/1:177:87,90:87:3028:90:3179:-229.114,0,-217.522	1/1:293:1,292:1:36:292:10222:-911.954,-84.6126,0	0/1:144:66,78:66:2308:78:2762:-203.971,0,-163.864	1/1:205:0,203:0:0:203:7174:-641.892,-61.1091,0	0/1:184:91,93:91:3212:93:3290:-240.216,0,-233.264	0/1:15:7,8:7:252:8:288:-21.6264,0,-18.4772	0/1:163:66,97:66:2324:97:3425:-256.237,0,-158.592	1/1:84:3,81:3:108:81:2865:-247.227,-15.2422,0	0/1:25:10,15:10:344:15:532:-39.5718,0,-23.6129	1/1:188:0,188:0:0:188:6643:-594.741,-56.5936,0	0/1:32:17,15:17:578:15:525:-37.1399,0,-42.4413	0/1:17:12,5:12:426:5:176:-11.0392,0,-33.5166	1/1:46:0,46:0:0:46:1591:-142.837,-13.8474,0	1/1:139:0,135:0:0:135:4713:-420.24,-40.6391,0	0/1:180:87,93:87:3032:93:3259:-237.902,0,-218.159	0/1:7:2,5:2:72:5:180:-14.3892,0,-4.72467	1/1:230:0,230:0:0:230:8164:-732.116,-69.2369,0	0/1:276:135,139:135:4681:139:4900:-354.065,0,-336.549	0/1:178:86,92:86:3005:92:3258:-236.843,0,-215.913	0/1:117:56,61:56:1944:61:2129:-155.922,0,-139.623	1/1:168:0,168:0:0:168:5910:-529.577,-50.573,0	1/1:207:2,205:2:72:205:7254:-641.441,-55.4862,0	0/1:105:55,50:55:1906:50:1765:-126.074,0,-139.684	0/1:72:31,41:31:1080:41:1430:-105.557,0,-75.0073	0/1:120:43,77:43:1484:77:2717:-207.287,0,-97.602	1/1:52:0,52:0:0:52:1778:-159.358,-15.6536,0	0/1:186:86,97:86:2997:97:3428:-250.312,0,-212.458	1/1:146:0,146:0:0:146:5095:-453.69,-43.9504,0	1/1:333:0,332:0:0:332:11677:-1038.35,-99.942,0	0/1:210:115,95:115:4114:95:3364:-238.697,0,-306.342	0/1:163:86,77:86:2992:77:2723:-195.119,0,-218.978	1/1:208:1,207:1:36:207:7278:-643.644,-59.0355,0	0/1:16:8,8:8:284:8:288:-21.1692,0,-20.9707	1/1:177:1,176:1:36:176:6262:-555.524,-49.6931,0	0/1:220:85,135:85:2969:135:4783:-358.404,0,-199.202	0/1:355:177,177:177:6173:177:6200:-447.275,0,-447.002	0/1:125:59,65:59:2033:65:2296:-168.068,0,-145.122	0/1:152:74,77:74:2598:77:2718:-197.587,0,-187.702	1/1:132:1,131:1:36:131:4649:-411.205,-36.2815,0	0/1:238:121,116:121:4221:116:4115:-296.531,0,-307.004	0/1:57:26,31:26:885:31:1057:-77.3244,0,-62.1814	1/1:122:0,122:0:0:122:4284:-381.442,-36.7257,0	0/1:103:56,47:56:1937:47:1672:-118.119,0,-142.776	1/1:122:0,121:0:0:121:4279:-381.404,-36.4246,0	0/1:194:100,94:100:3530:94:3343:-238.01,0,-257.746	0/1:197:161,36:161:5586:36:1270:-54.9021,0,-441.825	1/1:165:0,164:0:0:164:5750:-514.678,-49.3689,0	1/1:222:4,218:4:144:218:7668:-673.241,-53.5292,0
chr05	28954354	.	A	T	112653	PASS	AB=0.431368;ABP=193.175;AC=138;AF=0.734043;AN=188;AO=5473;CIGAR=1X;DP=8131;DPB=8131;DPRA=0;EPP=11611.2;EPPR=5504.32;GTI=3;LEN=1;MEANALT=1.02128;MQM=59.9742;MQMR=59.9816;NS=94;NUMALT=1;ODDS=1.62491;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=195012;QR=95279;RO=2656;RPL=5441;RPP=11611.2;RPPR=5504.32;RPR=32;RUN=1;SAF=5473;SAP=11887.5;SAR=0;SRF=2656;SRP=5770.44;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	0/1:85:58,27:58:2084:27:957:-60.8563,0,-162.242	1/1:146:0,146:0:0:146:5186:-466.87,-43.9504,0	1/1:154:1,153:1:36:153:5459:-487.84,-42.7603,0	0/1:56:38,18:38:1364:18:640:-41.0716,0,-106.203	0/1:57:40,17:40:1440:17:612:-38.2547,0,-112.739	1/1:54:0,54:0:0:54:1912:-172.356,-16.2556,0	1/1:111:0,111:0:0:111:3922:-353.171,-33.4143,0	0/1:56:32,24:32:1136:24:860:-60.8642,0,-85.6912	1/1:78:0,78:0:0:78:2775:-249.991,-23.4803,0	1/1:79:0,79:0:0:79:2812:-253.316,-23.7814,0	1/1:129:0,129:0:0:129:4558:-410.378,-38.8329,0	0/1:80:42,38:42:1504:38:1363:-98.8882,0,-111.572	0/1:80:35,45:35:1252:45:1611:-121.197,0,-88.9027	0/1:54:21,33:21:756:33:1184:-90.6127,0,-52.1116	1/1:63:0,63:0:0:63:2255:-203.212,-18.9649,0	0/1:66:39,27:39:1404:27:959:-66.7574,0,-106.791	1/1:29:0,29:0:0:29:1024:-92.4712,-8.72987,0	0/1:38:17,21:17:608:21:739:-55.3927,0,-43.6129	0/1:201:144,57:144:5172:57:2012:-120.844,0,-405.111	0/1:102:72,30:72:2580:30:1072:-66.0874,0,-201.744	0/1:96:85,11:85:3048:11:392:-6.72118,0,-245.65	0/1:35:10,25:10:356:25:879:-68.8907,0,-21.8452	1/1:62:3,59:3:108:59:2104:-179.553,-8.58869,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:305:203,102:203:7271:102:3625:-234.641,0,-562.624	1/1:208:0,208:0:0:208:7403:-666.32,-62.6142,0	0/1:42:22,20:22:792:20:708:-51.4023,0,-58.9624	0/1:220:118,102:118:4240:102:3634:-261.039,0,-315.551	1/1:91:2,89:2:72:89:3196:-281.026,-20.557,0	1/1:47:2,45:2:72:45:1596:-137.092,-7.31169,0	0/1:27:20,7:20:720:7:248:-14.5364,0,-57.001	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:8:0,8:0:0:8:284:-25.9027,-2.40824,0	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:38:0,38:0:0:38:1355:-122.24,-11.4391,0	0/1:217:104,113:104:3732:113:3957:-290.994,0,-270.757	1/1:71:0,71:0:0:71:2525:-227.501,-21.3731,0	1/1:77:0,77:0:0:77:2759:-248.551,-23.1793,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:129:61,68:61:2196:68:2432:-180.302,0,-159.072	1/1:40:0,40:0:0:40:1417:-127.826,-12.0412,0	0/1:128:91,37:91:3268:37:1324:-80.9303,0,-255.808	0/1:66:21,45:21:747:45:1620:-126.222,0,-47.6863	1/1:53:1,52:1:36:52:1849:-163.09,-12.3563,0	1/1:49:1,48:1:36:48:1724:-151.847,-11.1522,0	0/1:112:50,62:50:1796:62:2210:-165.449,0,-128.207	1/1:136:0,136:0:0:136:4863:-437.821,-40.9401,0	0/1:107:83,24:83:2960:24:860:-45.5116,0,-234.424	1/1:121:0,121:0:0:121:4320:-388.976,-36.4246,0	0/1:139:104,35:104:3736:35:1238:-69.8797,0,-294.596	0/1:21:14,7:14:504:7:252:-16.7073,0,-39.3765	0/1:181:95,86:95:3416:86:3091:-223.902,0,-253.166	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:15:8,7:8:288:7:248:-18.1487,0,-21.752	1/1:176:0,176:0:0:176:6253:-562.861,-52.9813,0	0/1:13:6,7:6:212:7:248:-18.7508,0,-15.5114	0/1:17:8,9:8:288:9:309:-23.0232,0,-21.1499	1/1:17:1,16:1:36:16:572:-48.2152,-1.51924,0	1/1:54:0,54:0:0:54:1928:-173.797,-16.2556,0	0/1:139:64,75:64:2304:75:2684:-199.962,0,-165.777	0/1:11:1,10:1:36:10:360:-29.433,0,-0.286945	1/1:198:0,198:0:0:198:7089:-637.91,-59.6039,0	0/1:139:106,33:106:3791:33:1184:-65.0251,0,-299.545	0/1:82:62,20:62:2228:20:720:-40.4443,0,-176.03	0/1:91:49,42:49:1764:42:1497:-107.629,0,-131.65	1/1:66:0,66:0:0:66:2363:-212.928,-19.868,0	1/1:149:2,147:2:72:147:5204:-461.664,-38.0167,0	0/1:42:9,33:9:324:33:1175:-93.4137,0,-16.8626	0/1:58:29,29:29:1040:29:1031:-75.6429,0,-76.4546	0/1:56:36,19:36:1292:19:680:-44.6128,0,-99.6673	1/1:28:0,28:0:0:28:992:-89.5944,-8.42884,0	0/1:138:69,69:69:2476:69:2419:-176.423,0,-181.551	1/1:123:0,123:0:0:123:4370:-393.45,-37.0267,0	1/1:87:0,87:0:0:87:3116:-280.667,-26.1896,0	0/1:165:84,81:84:3016:81:2904:-211.925,0,-222	0/1:105:78,27:78:2808:27:964:-55.4687,0,-221.351	1/1:145:0,145:0:0:145:5175:-465.89,-43.6494,0	0/1:35:23,12:23:828:12:432:-28.6851,0,-64.3081	1/1:94:0,94:0:0:94:3371:-303.604,-28.2968,0	0/1:75:36,39:36:1280:39:1404:-104.082,0,-92.926	0/1:146:71,75:71:2540:75:2666:-196.233,0,-184.901	0/1:84:49,35:49:1748:35:1249:-87.428,0,-132.318	0/1:78:27,51:27:964:51:1819:-140.511,0,-63.5965	1/1:39:0,39:0:0:39:1387:-125.128,-11.7402,0	0/1:131:70,61:70:2520:61:2171:-156.219,0,-187.616	0/1:33:23,10:23:819:10:356:-22.4473,0,-64.0976	1/1:76:0,76:0:0:76:2716:-244.684,-22.8783,0	0/1:84:29,55:29:1044:55:1966:-151.928,0,-68.3599	1/1:60:0,60:0:0:60:2151:-193.857,-18.0618,0	0/1:140:52,88:52:1872:88:3129:-239.692,0,-126.615	0/1:71:34,37:34:1211:37:1310:-96.827,0,-87.9224	1/1:100:1,99:1:36:99:3516:-313.052,-26.5047,0	1/1:96:0,95:0:0:95:3407:-306.483,-28.5979,0
chr06	16858	.	C	G	178299	PASS	AB=0.503871;ABP=3.78358;AC=139;AF=0.739362;AN=188;AO=8674;CIGAR=1X;DP=11640;DPB=11640;DPRA=0;EPP=18838.4;EPPR=6428.4;GTI=0;LEN=1;MEANALT=1.06383;MQM=47.7524;MQMR=59.3342;NS=94;NUMALT=1;ODDS=9.19317;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=309909;QR=105297;RO=2959;RPL=0;RPP=18838.4;RPPR=6428.4;RPR=8674;RUN=1;SAF=8674;SAP=18838.4;SAR=0;SRF=2959;SRP=6428.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:72:0,72:0:0:72:2568:-228.275,-21.6742,0	1/1:106:0,106:0:0:106:3766:-332.173,-31.9092,0	0/1:102:55,47:55:1955:47:1664:-115.816,0,-145.464	1/1:309:0,309:0:0:309:11062:-986.414,-93.0183,0	0/1:124:52,72:52:1868:72:2558:-190.435,0,-130.93	0/1:78:41,37:41:1464:37:1324:-94.0742,0,-108.496	0/1:134:65,69:65:2327:69:2471:-180.637,0,-169.252	0/1:50:28,22:28:982:22:783:-54.5533,0,-73.6402	0/1:123:78,44:78:2784:44:1580:-102.17,0,-213.464	0/1:69:27,42:27:955:42:1504:-112.391,0,-65.4754	0/1:156:86,70:86:3036:70:2504:-175.921,0,-226.455	1/1:107:0,107:0:0:107:3815:-335.528,-32.2102,0	0/1:92:53,39:53:1879:39:1400:-95.8957,0,-141.484	0/1:94:45,49:45:1616:49:1756:-128.588,0,-117.376	1/1:82:0,82:0:0:82:2919:-261.307,-24.6845,0	0/1:66:39,27:39:1370:27:968:-66.7797,0,-103.673	1/1:68:0,68:0:0:68:2423:-214.764,-20.47,0	0/1:71:43,28:43:1544:28:1004:-67.1198,0,-117.813	1/1:60:0,59:0:0:59:2112:-185.917,-17.7608,0	1/1:320:0,319:0:0:319:11372:-1011.89,-96.0286,0	1/1:145:0,145:0:0:145:5182:-459.112,-43.6494,0	1/1:121:0,121:0:0:121:4294:-384.001,-36.4246,0	0/1:110:48,62:48:1716:62:2224:-164.162,0,-121.557	0/1:138:64,74:64:2274:74:2633:-192.262,0,-163.106	1/1:108:0,108:0:0:108:3862:-342.9,-32.5112,0	0/1:401:225,176:225:8021:176:6299:-443.34,0,-600.454	0/1:216:81,135:81:2870:135:4793:-360.08,0,-193.445	1/1:41:0,41:0:0:41:1472:-131.264,-12.3422,0	0/1:350:135,215:135:4802:215:7677:-578.936,0,-326.294	1/1:154:2,152:2:72:152:5451:-476.901,-39.5219,0	1/1:209:0,207:0:0:207:7405:-659.21,-62.3132,0	0/1:22:10,12:10:356:12:432:-32.2849,0,-25.7586	1/1:34:0,34:0:0:34:1224:-108.819,-10.235,0	0/1:18:7,11:7:248:11:390:-27.4604,0,-17.2457	0/1:13:4,9:4:144:9:320:-24.8326,0,-9.34274	1/1:16:0,16:0:0:16:572:-50.2202,-4.81648,0	0/1:287:132,155:132:4687:155:5525:-407.74,0,-335.567	0/1:162:90,72:90:3207:72:2584:-179.133,0,-239.993	1/1:117:0,117:0:0:117:4177:-367.807,-35.2205,0	0/1:13:6,7:6:216:7:252:-18.9149,0,-15.8771	1/1:198:4,194:4:144:194:6952:-604.368,-46.2903,0	0/1:70:35,35:35:1260:35:1256:-91.2972,0,-92.6334	0/1:206:111,95:111:3958:95:3381:-238.798,0,-294.182	0/1:101:43,58:43:1527:58:2079:-154.881,0,-107.318	0/1:98:51,47:51:1832:47:1680:-120.711,0,-135.635	0/1:123:68,55:68:2410:55:1955:-137.323,0,-179.794	1/1:128:0,128:0:0:128:4566:-399.088,-38.5318,0	1/1:240:0,240:0:0:240:8573:-765.945,-72.2472,0	1/1:150:1,149:1:36:149:5317:-470.637,-41.5562,0	1/1:149:1,147:1:36:147:5237:-462.753,-41.2903,0	0/1:257:110,147:110:3939:147:5259:-393.483,0,-277.061	1/1:16:0,16:0:0:16:572:-51.5543,-4.81648,0	1/1:150:1,149:1:32:149:5297:-464.283,-41.9552,0	0/1:49:23,26:23:819:26:936:-69.5964,0,-59.1674	0/1:33:13,20:13:460:20:705:-52.4418,0,-31.6779	0/1:250:127,123:127:4533:123:4404:-317.433,0,-332.865	1/1:58:0,58:0:0:58:2066:-184.378,-17.4597,0	0/1:17:7,9:7:252:9:324:-24.2563,0,-17.8369	0/1:35:10,25:10:352:25:882:-68.8826,0,-21.482	1/1:112:0,112:0:0:112:4020:-357.26,-33.7154,0	0/1:161:75,86:75:2662:86:3076:-225.959,0,-191.239	0/1:5:4,1:4:135:1:36:-2.07362,0,-10.975	1/1:288:0,288:0:0:288:10275:-917.479,-86.6966,0	1/1:179:1,178:1:36:178:6351:-563.053,-50.2861,0	1/1:94:0,94:0:0:94:3351:-297.325,-28.2968,0	1/1:121:0,121:0:0:121:4348:-386.72,-36.4246,0	0/1:173:72,101:72:2538:101:3590:-266.494,0,-176.453	1/1:58:0,58:0:0:58:2076:-185.72,-17.4597,0	0/1:60:33,27:33:1172:27:972:-67.8305,0,-87.658	1/1:60:0,60:0:0:60:2143:-189.366,-18.0618,0	1/1:92:1,91:1:36:91:3256:-286.251,-24.0965,0	0/1:29:14,15:14:500:15:540:-39.9305,0,-36.6063	1/1:139:0,139:0:0:139:4988:-439.802,-41.8432,0	0/1:87:51,36:51:1828:36:1296:-87.8098,0,-138.465	0/1:213:103,110:103:3662:110:3910:-283.459,0,-265.636	0/1:207:103,104:103:3662:104:3716:-269.75,0,-267.185	1/1:169:0,169:0:0:169:6029:-534.239,-50.8741,0	1/1:115:0,115:0:0:115:4115:-362.621,-34.6185,0	0/1:21:14,7:14:483:7:252:-15.9909,0,-37.4757	1/1:159:0,159:0:0:159:5701:-507.532,-47.8638,0	1/1:111:0,111:0:0:111:3966:-350.678,-33.4143,0	0/1:292:138,154:138:4918:154:5484:-401.691,0,-354.495	1/1:124:1,123:1:36:123:4404:-388.208,-33.7294,0	1/1:99:0,99:0:0:99:3548:-316.33,-29.802,0	0/1:112:60,52:60:2114:52:1847:-131.901,0,-156.76	1/1:168:0,168:0:0:168:6016:-536.922,-50.573,0	0/1:58:27,31:27:959:31:1112:-80.9179,0,-69.1657	1/1:100:0,100:0:0:100:3579:-317.259,-30.103,0	0/1:95:54,41:54:1924:41:1463:-100.929,0,-144.532	1/1:87:0,87:0:0:87:3116:-276.634,-26.1896,0	0/1:204:119,85:119:4218:85:3048:-209.677,0,-317.822	0/1:97:67,30:67:2395:30:1080:-67.8159,0,-186.108	1/1:136:1,135:1:36:135:4828:-425.762,-37.3418,0	1/1:129:0,129:0:0:129:4615:-411.963,-38.8329,0
chr06	251047	.	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chr06	256772	.	T	C	182652	PASS	AB=0.504969;ABP=4.36991;AC=140;AF=0.744681;AN=188;AO=9239;CIGAR=1X;DP=12409;DPB=12409;DPRA=0;EPP=20065.2;EPPR=6871.38;GTI=0;LEN=1;MEANALT=1.03191;MQM=41.1293;MQMR=50.1895;NS=94;NUMALT=1;ODDS=7.60883;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=329685;QR=113457;RO=3167;RPL=1;RPP=20056.6;RPPR=6854.03;RPR=9238;RUN=1;SAF=1;SAP=20056.6;SAR=9238;SRF=2;SRP=6862.7;SRR=3165;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:57:0,57:0:0:57:2009:-173.981,-17.1587,0	1/1:181:1,180:1:36:180:6414:-554.11,-50.9034,0	0/1:185:101,84:101:3628:84:3001:-202.394,0,-267.437	1/1:310:1,309:1:36:309:11011:-957.662,-89.7328,0	0/1:41:19,22:19:680:22:792:-56.3416,0,-48.1156	0/1:93:37,56:37:1332:56:1984:-145.044,0,-91.4219	0/1:147:79,68:79:2836:68:2433:-167.52,0,-209.999	0/1:220:114,106:114:4096:106:3797:-259.412,0,-300.254	0/1:165:84,81:84:2993:81:2869:-197.857,0,-218.183	0/1:207:113,94:113:4049:94:3344:-226.52,0,-300.867	0/1:100:60,40:60:2160:40:1428:-94.1331,0,-163.077	1/1:74:1,73:1:36:73:2566:-218.384,-18.6932,0	0/1:49:25,24:25:896:24:864:-60.1075,0,-65.4587	0/1:120:65,55:65:2340:55:1953:-133.285,0,-172.875	1/1:62:0,62:0:0:62:2229:-194.172,-18.6639,0	0/1:62:22,40:22:792:40:1436:-104.971,0,-52.5536	1/1:83:0,83:0:0:83:2972:-258.076,-24.9855,0	0/1:60:25,35:25:900:35:1256:-90.9561,0,-62.9151	1/1:29:0,29:0:0:29:1044:-90.1084,-8.72987,0	1/1:236:0,236:0:0:236:8468:-737.569,-71.0431,0	1/1:257:0,257:0:0:257:9190:-792.115,-77.3647,0	1/1:134:0,134:0:0:134:4800:-420.55,-40.338,0	0/1:158:75,83:75:2665:83:2976:-213.462,0,-188.296	0/1:207:89,117:89:3162:117:4156:-295.746,0,-217.733	1/1:78:0,78:0:0:78:2789:-240.757,-23.4803,0	0/1:429:223,206:223:8000:206:7370:-519.15,0,-588.739	0/1:320:135,185:135:4840:185:6596:-472.215,0,-335.458	1/1:41:0,41:0:0:41:1457:-125.802,-12.3422,0	0/1:355:178,177:178:6373:177:6360:-454.1,0,-463.892	1/1:227:7,220:7:252:220:7878:-657.084,-45.4297,0	1/1:255:11,243:11:392:243:8667:-719.786,-41.3108,0	1/1:5:0,5:0:0:5:180:-15.8907,-1.50515,0	1/1:30:1,29:1:36:29:1044:-86.0222,-5.84328,0	0/1:11:8,3:8:288:3:108:-6.43462,0,-22.5858	0/1:11:4,7:4:144:7:252:-18.2844,0,-9.94595	1/1:26:0,26:0:0:26:936:-81.7963,-7.82678,0	0/1:221:90,131:90:3228:131:4674:-345.998,0,-222.749	0/1:320:145,175:145:5185:175:6244:-433.558,0,-365.328	1/1:92:0,92:0:0:92:3273:-279.927,-27.6948,0	0/1:9:8,1:8:288:1:36:-0.745221,0,-23.4157	1/1:193:0,193:0:0:193:6894:-593.617,-58.0988,0	0/1:36:18,18:18:648:18:648:-44.8207,0,-47.2582	0/1:185:97,88:97:3488:88:3149:-215.552,0,-255.927	0/1:68:27,41:27:968:41:1468:-107.967,0,-66.6496	0/1:66:42,24:42:1500:24:864:-56.0534,0,-114.691	0/1:149:87,62:87:3124:62:2213:-150.322,0,-235.543	1/1:156:0,155:0:0:155:5563:-479.595,-46.6597,0	1/1:219:0,219:0:0:219:7800:-678.944,-65.9256,0	1/1:172:0,172:0:0:172:6099:-532.122,-51.7772,0	1/1:220:1,219:1:36:219:7816:-677.024,-62.6401,0	0/1:161:98,63:98:3500:63:2253:-150.268,0,-266.044	1/1:23:0,23:0:0:23:828:-72.8362,-6.92369,0	1/1:188:0,188:0:0:188:6725:-581.91,-56.5936,0	0/1:36:15,21:15:540:21:756:-56.2475,0,-37.9043	0/1:34:26,8:26:936:8:288:-14.4947,0,-72.8709	0/1:177:106,71:106:3789:71:2544:-166.968,0,-285.391	1/1:42:0,42:0:0:42:1508:-132.311,-12.6433,0	0/1:15:8,7:8:288:7:252:-17.6449,0,-21.7025	0/1:29:16,13:16:576:13:468:-32.9461,0,-43.3711	1/1:146:0,146:0:0:146:5216:-448.833,-43.9504,0	0/1:120:63,57:63:2264:57:2048:-142.382,0,-166.362	0/1:23:9,14:9:316:14:504:-37.154,0,-21.5828	1/1:339:0,339:0:0:339:12092:-1067.33,-102.049,0	1/1:284:1,283:1:36:283:10039:-873.589,-81.906,0	1/1:148:3,145:3:108:145:5195:-435.934,-34.5319,0	1/1:110:0,110:0:0:110:3856:-338.248,-33.1133,0	0/1:265:120,145:120:4316:145:5174:-372.501,0,-304.481	1/1:143:1,142:1:36:142:5051:-436.628,-39.4608,0	0/1:43:21,22:21:756:22:788:-55.0893,0,-54.7922	1/1:110:0,110:0:0:110:3922:-338.763,-33.1133,0	1/1:87:0,87:0:0:87:3091:-271.889,-26.1896,0	0/1:40:23,17:23:820:17:612:-41.8567,0,-61.8488	1/1:103:0,103:0:0:103:3678:-318.859,-31.0061,0	0/1:86:37,49:37:1328:49:1756:-126.706,0,-93.3398	0/1:349:168,181:168:6013:181:6387:-445.638,0,-432.101	0/1:229:106,123:106:3781:123:4405:-316.049,0,-268.855	1/1:85:0,85:0:0:85:3032:-263.013,-25.5876,0	1/1:208:2,206:2:68:206:7343:-630.824,-56.1768,0	0/1:25:11,14:11:396:14:500:-36.3362,0,-27.0319	1/1:160:0,160:0:0:160:5699:-490.28,-48.1648,0	1/1:165:0,165:0:0:165:5871:-509.232,-49.67,0	0/1:303:128,175:128:4551:175:6201:-448.921,0,-315.779	1/1:90:0,90:0:0:90:3216:-279.215,-27.0927,0	1/1:72:0,72:0:0:72:2584:-224.739,-21.6742,0	0/1:88:38,50:38:1360:50:1762:-127.519,0,-94.7928	1/1:128:0,128:0:0:128:4562:-398.422,-38.5318,0	0/1:60:28,32:28:1008:32:1140:-81.6303,0,-72.4348	1/1:75:0,75:0:0:75:2688:-234.552,-22.5773,0	0/1:79:39,40:39:1400:40:1436:-101.572,0,-101.575	1/1:44:0,44:0:0:44:1582:-135.719,-13.2453,0	0/1:119:63,56:63:2264:56:2001:-137.199,0,-167.097	0/1:64:44,20:44:1580:20:720:-44.1329,0,-122.362	1/1:100:0,100:0:0:100:3573:-311.229,-30.103,0	1/1:83:0,83:0:0:83:2969:-260.377,-24.9855,0
chr06	361588	.	G	A	109200	PASS	AB=0.530748;ABP=75.6552;AC=50;AF=0.265957;AN=188;AO=4745;CIGAR=1X;DP=16917;DPB=16917;DPRA=1.17918;EPP=10306.6;EPPR=26410.3;GTI=1;LEN=1;MEANALT=1.10606;MQM=59.9867;MQMR=59.9955;NS=94;NUMALT=1;ODDS=5.82762;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169075;QR=424369;RO=12161;RPL=2442;RPP=11.8522;RPPR=37.7369;RPR=2303;RUN=1;SAF=2442;SAP=11.8522;SAR=2303;SRF=6301;SRP=37.7369;SRR=5860;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:84:84,0:84:2893:0:0:0,-25.2865,-260.609	0/0:229:227,1:227:8020:1:36:0,-65.3964,-718.232	0/1:248:124,124:124:4274:124:4452:-326.194,0,-310.191	0/0:294:292,2:292:10185:2:72:0,-81.6661,-909.771	0/1:153:80,73:80:2836:73:2606:-188.731,0,-209.423	0/1:87:36,51:36:1264:51:1815:-137.441,0,-87.8702	0/1:248:102,145:102:3522:145:5146:-388.62,0,-242.569	0/1:280:159,121:159:5555:121:4304:-303.249,0,-415.8	0/1:182:84,98:84:2896:98:3469:-257.633,0,-206.091	0/1:141:59,82:59:2085:82:2929:-221.399,0,-145.474	0/1:167:76,91:76:2685:91:3210:-238.851,0,-191.623	0/0:212:211,1:211:7277:1:36:0,-60.2201,-651.409	0/1:153:91,62:91:3204:62:2196:-151.846,0,-242.527	0/1:222:102,120:102:3579:120:4258:-316.57,0,-255.492	0/0:114:111,2:111:3820:2:72:0,-27.5129,-337.178	0/1:216:117,99:117:4083:99:3516:-251.627,0,-302.639	0/0:181:181,0:181:6352:0:0:0,-54.4864,-571.782	0/1:70:40,30:40:1398:30:1072:-75.7204,0,-105.043	0/0:86:86,0:86:3048:0:0:0,-25.8886,-274.552	0/0:262:262,0:262:9148:0:0:0,-78.8699,-823.314	0/0:283:283,0:283:9867:0:0:0,-85.1915,-888	0/0:195:195,0:195:6751:0:0:0,-58.7008,-607.679	0/1:129:45,84:45:1540:84:2972:-228.88,0,-100.052	0/1:130:48,82:48:1703:82:2944:-226.06,0,-114.421	0/0:131:129,2:129:4444:2:72:0,-32.5982,-393.303	0/1:511:235,276:235:8176:276:9820:-729.863,0,-582.049	0/1:429:187,242:187:6573:242:8616:-646.294,0,-462.521	0/0:75:75,0:75:2630:0:0:0,-22.5772,-236.946	0/1:495:251,244:251:8733:244:8697:-633.715,0,-636.967	0/0:250:240,10:240:8465:10:360:0,-42.5132,-729.119	0/0:164:161,2:161:5637:2:72:0,-42.591,-500.625	0/1:18:9,9:9:311:9:324:-24.0873,0,-22.9052	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:12:5,7:5:180:7:248:-19.0518,0,-12.9397	0/1:21:14,7:14:476:7:248:-16.3426,0,-36.8403	0/0:26:26,0:26:903:0:0:0,-7.82678,-81.5838	0/1:448:212,236:212:7341:236:8434:-624.156,0,-525.9	0/1:300:127,173:127:4477:173:6158:-464.009,0,-312.793	0/0:158:158,0:158:5514:0:0:0,-47.5627,-496.397	1/1:6:0,6:0:0:6:199:-18.2355,-1.80618,0	0/0:195:190,5:190:6589:5:180:0,-42.1488,-576.552	0/1:81:33,48:33:1102:48:1720:-130.702,0,-75.0923	0/1:315:174,140:174:6092:140:4981:-353.557,0,-453.511	0/1:146:64,81:64:2254:81:2889:-216.236,0,-159.114	0/1:150:75,75:75:2591:75:2669:-195.3,0,-188.284	0/1:198:84,114:84:2946:114:4064:-306.344,0,-205.773	0/0:208:208,0:208:7208:0:0:0,-62.6142,-648.795	0/0:280:280,0:280:9781:0:0:0,-84.2884,-880.261	0/0:138:138,0:138:4835:0:0:0,-41.5421,-435.313	0/0:243:242,1:242:8472:1:36:0,-69.552,-758.898	0/1:217:97,120:97:3439:120:4295:-321.403,0,-244.402	0/0:15:15,0:15:527:0:0:0,-4.51545,-47.7602	0/0:246:246,0:246:8597:0:0:0,-74.0534,-773.745	0/1:126:70,56:70:2454:56:1990:-141.443,0,-183.183	0/1:22:8,14:8:284:14:504:-39.0754,0,-19.2807	0/1:229:104,125:104:3583:125:4426:-329.573,0,-253.748	0/0:63:61,2:61:2148:2:68:0,-12.5072,-187.128	0/1:13:5,8:5:172:8:288:-22.354,0,-11.9046	0/1:28:15,13:15:527:13:464:-33.6687,0,-39.3313	0/0:166:164,0:164:5769:0:0:0,-49.3689,-518.994	0/1:296:137,159:137:4777:159:5674:-421.674,0,-340.906	0/1:14:6,8:6:212:8:282:-21.5067,0,-15.2104	0/0:300:297,2:297:10506:2:72:0,-83.5311,-938.632	0/0:330:329,1:329:11416:1:36:0,-95.7416,-1023.75	0/0:126:125,0:125:4388:0:0:0,-37.6287,-394.74	0/0:160:159,1:159:5491:1:36:0,-44.5665,-490.733	0/1:290:119,171:119:4129:171:6110:-462.702,0,-284.502	0/0:193:192,1:192:6719:1:36:0,-54.5005,-601.199	0/1:114:46,68:46:1624:68:2412:-183.017,0,-112.129	0/0:123:123,0:123:4273:0:0:0,-37.0267,-384.755	0/0:155:155,0:155:5416:0:0:0,-46.6596,-487.578	0/1:42:27,15:27:952:15:536:-35.9316,0,-73.3519	0/0:196:196,0:196:6809:0:0:0,-59.0019,-612.903	0/1:164:80,84:80:2767:84:2984:-219.422,0,-199.903	0/1:282:117,165:117:4129:165:5877:-444.15,0,-286.851	0/1:294:144,150:144:4983:150:5371:-395.018,0,-360.122	0/0:354:350,4:350:12201:4:140:0,-93.62,-1085.02	0/0:183:178,5:178:6198:5:180:0,-38.5364,-541.376	0/1:33:15,18:15:532:18:644:-48.3566,0,-38.2791	0/0:174:172,2:172:6046:2:72:0,-45.5425,-537.414	0/0:187:186,0:186:6501:0:0:0,-55.9916,-584.823	0/1:290:145,145:145:5027:145:5208:-381.558,0,-365.286	0/0:161:161,0:161:5640:0:0:0,-48.4658,-507.731	0/0:127:127,0:127:4465:0:0:0,-38.2308,-402.027	0/1:146:61,85:61:2145:85:3030:-228.979,0,-149.366	0/0:292:292,0:292:10098:0:0:0,-87.9008,-908.788	0/1:54:27,27:27:935:27:972:-71.5423,0,-68.2038	0/0:159:159,0:159:5493:0:0:0,-47.8638,-494.509	0/1:188:106,82:106:3714:82:2931:-207.43,0,-277.871	0/0:131:131,0:131:4614:0:0:0,-39.4349,-415.426	0/1:314:147,167:147:5144:167:5933:-439.559,0,-368.587	0/1:140:39,101:39:1362:101:3612:-283.14,0,-80.7326	0/0:145:145,0:145:5020:0:0:0,-43.6493,-451.954	0/0:242:242,0:242:8388:0:0:0,-72.8493,-754.952
chr06	501700	.	TATAG	TATAA,CATAA	175836	PASS	AB=0.4654,0.527094;ABP=47.3388,30.1911;AC=140,48;AF=0.744681,0.255319;AN=188;AO=5927,2265;CIGAR=4M1X,1X3M1X;DP=8246;DPB=8246;DPRA=0,1.19557;EPP=12734.7,4878.06;EPPR=26.8965;GTI=0;LEN=1,5;MEANALT=2.03191,2.5;MQM=59.9867,59.9815;MQMR=60;NS=94;NUMALT=2;ODDS=6.59757;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=211986,79921;QR=392;RO=11;RPL=5911,2260;RPP=12734.7,4878.06;RPPR=26.8965;RPR=16,5;RUN=1,1;SAF=0,0;SAP=12873.3,4921.4;SAR=5927,2265;SRF=0;SRP=26.8965;SRR=11;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:73:0,73,0:0:0:73,0:2601,0:-234.338,-21.9752,0,-234.338,-21.9752,-234.338	1/1:62:0,62,0:0:0:62,0:2210,0:-199.164,-18.6639,0,-199.164,-18.6639,-199.164	1/2:116:0,61,55:0:0:61,55:2180,1943:-336.336,-158.588,-140.225,-178.103,0,-161.547	1/1:167:0,166,0:0:0:166,0:5949,0:-535.116,-49.971,0,-535.116,-49.971,-535.116	1/2:56:0,29,27:0:0:29,27:1023,959:-161.796,-78.4982,-69.7683,-83.6516,0,-75.5238	1/2:45:0,29,16:0:0:29,16:1032,563:-130.294,-46.1833,-37.4534,-84.4636,0,-79.6471	1/2:81:0,34,47:0:0:34,47:1212,1643:-232.806,-134.009,-123.774,-99.1507,0,-85.0023	1/2:111:1,60,48:1:35:60,48:2143,1673:-307.683,-133.259,-118.045,-171.931,0,-160.33	1/2:140:0,54,85:0:0:54,85:1936,3005:-402.749,-244.844,-228.589,-158.009,0,-132.421	1/2:59:0,26,33:0:0:26,33:927,1157:-170.067,-94.5006,-86.6738,-75.9206,0,-65.9866	1/2:89:0,44,45:0:0:44,45:1569,1605:-259.092,-131.194,-117.948,-128.254,0,-114.708	1/1:151:1,149,1:1:35:149,1:5336,36:-476.869,-42.0107,0,-474.232,-41.9111,-476.779	1/2:100:0,48,51:0:0:48,51:1724,1796:-286.849,-146.209,-131.76,-140.636,0,-125.284	1/2:64:0,37,27:0:0:37,27:1332,957:-187.006,-78.3182,-67.1801,-109.044,0,-100.916	1/1:73:0,73,0:0:0:73,0:2597,0:-233.976,-21.9752,0,-233.976,-21.9752,-233.976	1/2:76:0,31,45:0:0:31,45:1104,1590:-219.828,-129.844,-120.512,-90.3387,0,-76.7924	1/1:35:0,35,0:0:0:35,0:1260,0:-113.705,-10.5361,0,-113.705,-10.5361,-113.705	1/2:34:0,18,15:0:0:18,15:644,521:-94.9102,-42.389,-36.9705,-52.5596,0,-48.0442	1/1:45:0,45,0:0:0:45,0:1612,0:-145.37,-13.5464,0,-145.37,-13.5464,-145.37	1/1:115:0,114,0:0:0:114,0:4096,0:-368.524,-34.3174,0,-368.524,-34.3174,-368.524	1/1:99:0,99,0:0:0:99,0:3535,0:-318.29,-29.802,0,-318.29,-29.802,-318.29	1/1:83:2,81,0:2:72:81,0:2885,0:-253.048,-18.1488,0,-253.65,-24.3834,-259.525	1/2:118:0,50,65:0:0:50,65:1792,2273:-331.077,-184.921,-169.869,-146.167,0,-126.6	1/2:74:3,43,28:3:107:43,28:1548,999:-198.125,-72.7174,-68.4956,-117.59,0,-117.883	1/1:126:0,126,0:0:0:126,0:4524,0:-407.326,-37.9298,0,-407.326,-37.9298,-407.326	1/2:234:0,94,140:0:0:94,140:3368,4982:-681.068,-406.386,-378.089,-275.039,0,-232.895	1/2:280:0,112,168:0:0:112,168:4015,5922:-809.989,-482.523,-448.807,-327.822,0,-277.249	1/1:37:0,37,0:0:0:37,0:1328,0:-119.822,-11.1381,0,-119.822,-11.1381,-119.822	1/2:178:0,85,91:0:0:85,91:3023,3209:-507.71,-261.351,-235.763,-246.422,0,-219.028	1/1:164:0,159,4:0:0:159,4:5661,142:-509.253,-47.8638,0,-497.683,-36.2975,-496.479	1/1:123:0,122,1:0:0:122,1:4362,36:-392.394,-36.7257,0,-389.457,-33.4284,-389.156	1/2:10:0,6,4:0:0:6,4:216,144:-29.734,-12.1095,-10.3033,-17.9843,0,-16.7802	1/1:20:0,20,0:0:0:20,0:703,0:-63.5935,-6.0206,0,-63.5935,-6.0206,-63.5935	1/2:9:0,7,2:0:0:7,2:252,67:-26.3421,-5.76078,-3.65357,-20.9217,0,-20.3197	1/2:14:0,6,8:0:0:6,8:208,284:-40.3979,-23.4951,-21.6889,-17.2529,0,-14.8447	1/1:19:0,19,0:0:0:19,0:684,0:-61.8903,-5.71957,0,-61.8903,-5.71957,-61.8903	1/2:201:0,99,101:0:0:99,101:3537,3550:-577.38,-288.997,-259.195,-288.426,0,-258.022	1/2:103:0,66,36:0:0:66,36:2349,1278:-295.571,-104.126,-84.2581,-191.44,0,-180.603	1/1:66:0,64,0:0:0:64,0:2300,0:-207.017,-19.2659,0,-207.017,-19.2659,-207.017	1/2:13:0,6,7:0:0:6,7:212,250:-38.0032,-20.7395,-18.9333,-17.6186,0,-15.5114	1/1:104:0,103,1:0:0:103,1:3683,36:-331.313,-31.0061,0,-328.375,-27.7088,-328.074	1/2:55:0,31,24:0:0:31,24:1116,853:-160.928,-69.8657,-60.5338,-91.4198,0,-84.195	1/2:161:0,73,87:0:0:73,87:2597,3077:-462.336,-250.687,-228.712,-211.722,0,-185.533	1/2:67:0,33,34:0:0:33,34:1180,1206:-194.829,-98.6112,-88.6772,-96.5741,0,-86.339	1/2:62:0,33,29:0:0:33,29:1184,1017:-179.69,-83.1102,-73.1762,-96.9343,0,-88.2045	1/2:142:0,45,96:0:0:45,96:1612,3380:-406.626,-275.159,-261.613,-131.464,0,-102.565	1/1:125:0,125,0:0:0:125,0:4471,0:-402.555,-37.6288,0,-402.555,-37.6288,-402.555	1/1:131:0,131,0:0:0:131,0:4675,0:-420.91,-39.4349,0,-420.91,-39.4349,-420.91	1/1:84:0,83,0:0:0:83,0:2960,0:-266.274,-24.9855,0,-266.274,-24.9855,-266.274	1/1:43:0,43,0:0:0:43,0:1527,0:-137.722,-12.9443,0,-137.722,-12.9443,-137.722	1/2:82:0,44,38:0:0:44,38:1564,1358:-238.53,-111.082,-97.8363,-127.805,0,-116.366	1/1:20:0,20,0:0:0:20,0:720,0:-65.1288,-6.0206,0,-65.1288,-6.0206,-65.1288	1/1:130:2,127,0:2:71:127,0:4548,0:-402.741,-32.449,0,-403.343,-38.2308,-409.128	1/2:64:0,25,39:0:0:25,39:896,1382:-186.016,-112.938,-105.413,-73.4346,0,-61.6944	1/2:24:0,12,12:0:0:12,12:432,416:-69.4142,-34.1586,-30.5462,-35.6088,0,-31.9965	1/2:120:0,48,69:0:0:48,69:1724,2399:-335.697,-195.056,-180.606,-140.655,0,-119.8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chr06	513157	.	A	T	159046	PASS	AB=0.449342;ABP=138.533;AC=139;AF=0.739362;AN=188;AO=7761;CIGAR=1X;DP=11174;DPB=11174;DPRA=0;EPP=16838.4;EPPR=7414.25;GTI=1;LEN=1;MEANALT=1;MQM=59.4306;MQMR=59.92;NS=94;NUMALT=1;ODDS=0.0884237;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=277428;QR=121730;RO=3413;RPL=3;RPP=16829.8;RPPR=7414.25;RPR=7758;RUN=1;SAF=1;SAP=16847.1;SAR=7760;SRF=0;SRP=7414.25;SRR=3413;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:43:0,43:0:0:43:1544:-139.063,-12.9443,0	1/1:96:4,92:4:144:92:3266:-280.791,-15.6117,0	0/1:127:89,38:89:3185:38:1346:-83.198,0,-248.636	1/1:359:2,357:2:72:357:12765:-1141.77,-101.233,0	0/1:132:61,71:61:2187:71:2552:-190.178,0,-157.359	0/1:121:65,56:65:2318:56:2000:-143.78,0,-172.437	0/1:185:80,105:80:2833:105:3756:-282.529,0,-199.518	0/1:181:107,74:107:3823:74:2656:-184.527,0,-289.777	0/1:106:44,62:44:1576:62:2228:-168.854,0,-110.222	0/1:149:78,71:78:2800:71:2537:-183.508,0,-207.386	0/1:50:21,29:21:756:29:1024:-77.4104,0,-53.3157	1/1:71:0,71:0:0:71:2533:-228.195,-21.3731,0	0/1:66:35,31:35:1256:31:1112:-80.5152,0,-93.4773	0/1:53:30,23:30:1064:23:824:-58.515,0,-80.1171	1/1:61:2,59:2:72:59:2108:-182.901,-11.5261,0	0/1:44:30,14:30:1061:14:485:-30.7319,0,-82.5519	1/1:48:1,47:1:36:47:1688:-148.597,-10.8512,0	0/1:53:34,19:34:1193:19:684:-45.7368,0,-91.7186	1/1:23:0,23:0:0:23:820:-74.1143,-6.92369,0	1/1:232:1,231:1:36:231:8279:-741.239,-66.2407,0	1/1:106:0,106:0:0:106:3780:-339.747,-31.9092,0	1/1:110:0,110:0:0:110:3940:-354.771,-33.1133,0	0/1:110:76,34:76:2681:34:1207:-75.822,0,-208.418	0/1:150:88,62:88:3160:62:2220:-154.793,0,-239.465	1/1:91:0,91:0:0:91:3246:-291.641,-27.3937,0	0/1:425:229,196:229:8175:196:6998:-501.408,0,-607.817	0/1:285:142,143:142:5087:143:5136:-376.463,0,-372.151	1/1:30:1,29:1:32:29:1027:-89.5396,-5.83159,0	0/1:636:334,302:334:11927:302:10755:-776.309,0,-881.832	1/1:129:9,120:9:324:120:4304:-357.529,-9.32702,0	1/1:116:2,114:2:72:114:4069:-359.504,-28.0828,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:27:2,25:2:72:25:900:-74.4788,-1.29109,0	0/1:11:7,4:7:252:4:144:-9.9448,0,-19.7176	0/1:11:7,4:7:243:4:144:-10.0023,0,-18.8962	0/1:23:6,17:6:216:17:604:-47.7302,0,-12.8668	0/1:187:106,81:106:3744:81:2904:-205.294,0,-280.87	0/1:295:168,127:168:6000:127:4534:-319.274,0,-451.132	1/1:62:1,61:1:36:61:2187:-193.092,-15.0656,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	1/1:279:4,275:4:144:275:9846:-872.494,-70.6738,0	0/1:50:29,21:29:1032:21:744:-52.2246,0,-78.142	0/1:244:155,89:155:5515:89:3186:-211.889,0,-422.938	0/1:61:33,28:33:1171:28:1000:-71.9525,0,-87.3338	0/1:60:25,35:25:875:35:1241:-93.8993,0,-61.0039	0/1:178:83,95:83:2963:95:3398:-252.432,0,-213.32	1/1:105:2,103:2:68:103:3684:-325.185,-25.1504,0	1/1:240:1,239:1:36:239:8572:-767.457,-68.6489,0	1/1:162:1,161:1:36:161:5731:-512.157,-45.1686,0	1/1:177:1,176:1:36:176:6308:-563.835,-49.684,0	0/1:311:151,160:151:5387:160:5733:-422.164,0,-391.343	1/1:12:0,12:0:0:12:432:-39.2203,-3.61236,0	1/1:190:2,188:2:72:188:6718:-597.78,-50.359,0	0/1:111:69,42:69:2472:42:1500:-101.87,0,-189.306	0/1:31:20,11:20:716:11:396:-26.6508,0,-55.4358	0/1:210:120,90:120:4292:90:3215:-225.362,0,-323.241	1/1:92:2,90:2:72:90:3207:-281.844,-20.858,0	0/1:18:2,16:2:63:16:576:-46.7456,0,-0.564615	0/1:32:16,16:16:572:16:558:-40.6836,0,-42.1805	1/1:104:0,104:0:0:104:3711:-333.591,-31.3071,0	0/1:108:51,57:51:1815:57:2040:-151.149,0,-131.119	0/1:14:3,11:3:108:11:396:-31.7683,0,-5.86075	1/1:136:2,134:2:72:134:4800:-424.983,-34.1034,0	1/1:216:1,215:1:36:215:7687:-687.558,-61.4242,0	1/1:60:2,58:2:72:58:2080:-180.618,-11.2251,0	1/1:159:2,157:2:72:157:5605:-497.583,-41.027,0	1/1:168:6,162:6:212:162:5783:-500.742,-31.1482,0	1/1:56:0,56:0:0:56:1974:-177.696,-16.8577,0	0/1:33:21,12:21:756:12:432:-29.2872,0,-58.4332	1/1:98:0,98:0:0:98:3516:-316.56,-29.5009,0	1/1:62:0,62:0:0:62:2220:-200.04,-18.6639,0	0/1:16:8,8:8:288:8:273:-20.0835,0,-21.4486	1/1:171:1,170:1:36:170:6084:-543.921,-47.8779,0	0/1:61:38,23:38:1364:23:820:-55.7597,0,-104.698	0/1:154:89,65:89:3177:65:2336:-163.889,0,-239.496	0/1:271:198,73:198:7053:73:2612:-153.539,0,-553.244	1/1:142:1,141:1:36:141:5028:-448.88,-39.2253,0	1/1:119:3,116:3:108:116:4160:-364.257,-25.7474,0	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	1/1:172:3,169:3:108:169:6052:-534.459,-41.702,0	1/1:165:2,163:2:72:163:5794:-513.99,-42.8332,0	0/1:319:176,143:176:6300:143:5105:-363.403,0,-471.062	1/1:84:0,84:0:0:84:2983:-268.647,-25.2865,0	1/1:48:1,47:1:36:47:1680:-147.754,-10.8512,0	0/1:83:45,38:45:1593:38:1364:-98.0748,0,-118.673	1/1:108:1,107:1:32:107:3852:-343.656,-29.313,0	0/1:41:24,17:24:852:17:612:-43.0712,0,-64.6582	1/1:77:1,76:1:36:76:2714:-240.748,-19.581,0	0/1:83:42,41:42:1483:41:1464:-107.046,0,-108.778	0/1:28:3,25:3:108:25:896:-72.5315,0,-1.64633	0/1:80:46,34:46:1635:34:1220:-86.0198,0,-123.354	0/1:69:53,16:53:1883:16:567:-30.5842,0,-148.977	1/1:12:0,12:0:0:12:417:-37.848,-3.61236,0	1/1:66:1,65:1:36:65:2336:-206.826,-16.2697,0
chr06	513195	.	A	C,T	235978	PASS	AB=0.441403,0.558269;ABP=184.966,182.936;AC=139,49;AF=0.739362,0.260638;AN=188;AO=7663,3472;CIGAR=1X,1X;DP=11137;DPB=11137;DPRA=0,1.74079;EPP=16643,7542.36;EPPR=5.18177;GTI=2;LEN=1,1;MEANALT=1.84043,2.01282;MQM=59.4528,59.9113;MQMR=60;NS=94;NUMALT=2;ODDS=0.645344;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=273324,123925;QR=36;RO=1;RPL=7663,3472;RPP=16643,7542.36;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=0,0;SAP=16643,7542.36;SAR=7663,3472;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:42:0,42,0:0:0:42,0:1480,0:-133.405,-12.6433,0,-133.405,-12.6433,-133.405	1/1:93:0,89,4:0:0:89,4:3168,144:-284.613,-26.7917,0,-272.889,-14.7086,-271.685	1/2:124:0,39,85:0:0:39,85:1384,3033:-360.353,-247.607,-235.867,-113.101,0,-87.5138	1/1:354:0,352,2:0:0:352,2:12519,72:-1125.88,-105.963,0,-1120,-99.7279,-1119.4	1/2:130:0,71,59:0:0:71,59:2533,2116:-379.425,-172.948,-151.575,-206.834,0,-189.074	1/2:122:0,55,67:0:0:55,67:1956,2400:-355.289,-196.07,-179.514,-159.576,0,-139.407	1/2:187:0,105,82:0:0:105,82:3748,2895:-541.641,-236.099,-204.491,-305.897,0,-281.212	1/2:177:0,72,105:0:0:72,105:2569,3733:-513.948,-304.56,-282.886,-209.744,0,-178.136	1/2:104:0,58,46:0:0:58,46:2083,1643:-304.233,-134.311,-116.852,-170.279,0,-156.432	1/2:151:0,71,80:0:0:71,80:2544,2876:-442.256,-234.994,-213.621,-207.621,0,-183.538	1/2:51:0,29,22:0:0:29,22:1024,788:-147.997,-64.6221,-55.8923,-83.7304,0,-77.1077	1/1:70:0,70,0:0:0:70,0:2504,0:-225.585,-21.0721,0,-225.585,-21.0721,-225.585	1/2:63:0,31,32:0:0:31,32:1104,1148:-183.97,-93.9969,-84.6649,-90.3305,0,-80.6976	1/2:55:0,22,33:0:0:22,33:783,1180:-160.387,-96.5727,-89.9501,-64.1703,0,-54.2363	1/1:60:0,58,2:0:0:58,2:2076,72:-186.497,-17.4597,0,-180.623,-11.2251,-180.02	1/2:44:0,14,30:0:0:14,30:500,1072:-128.499,-87.7424,-83.528,-41.1135,0,-32.0826	1/1:50:0,49,1:0:0:49,1:1733,36:-155.887,-14.7505,0,-152.95,-11.4532,-152.649	1/2:55:0,19,36:0:0:19,36:680,1273:-159.289,-104.034,-98.3143,-55.6107,0,-44.7736	1/1:23:0,23,0:0:0:23,0:824,0:-74.4751,-6.92369,0,-74.4751,-6.92369,-74.4751	1/1:231:0,230,1:0:0:230,1:8197,36:-737.079,-69.2369,0,-734.142,-65.9397,-733.841	1/1:106:0,106,0:0:0:106,0:3762,0:-338.763,-31.9092,0,-338.763,-31.9092,-338.763	1/1:113:0,113,0:0:0:113,0:4044,0:-364.128,-34.0164,0,-364.128,-34.0164,-364.128	1/2:116:0,36,80:0:0:36,80:1296,2857:-339.027,-233.279,-222.442,-106.107,0,-82.0245	1/2:149:0,59,90:0:0:59,90:2097,3228:-434.418,-263.647,-245.886,-171.128,0,-144.035	1/1:89:0,89,0:0:0:89,0:3184,0:-285.653,-26.7917,0,-285.653,-26.7917,-285.653	1/2:418:0,191,227:0:0:191,227:6829,8094:-1216.31,-660.127,-602.631,-556.542,0,-488.208	1/2:282:0,137,145:0:0:137,145:4895,5196:-823.087,-424.101,-382.86,-399.344,0,-355.694	1/1:31:0,30,1:0:0:30,1:1067,36:-95.9687,-9.0309,0,-93.0312,-5.73366,-92.7302	1/2:652:0,302,350:0:0:302,350:10773,12496:-1897.22,-1019.11,-928.197,-878.471,0,-773.111	1/1:129:0,120,9:0:0:120,9:4300,320:-386.32,-36.1236,0,-360.243,-9.69051,-357.534	1/1:108:0,106,2:0:0:106,2:3781,72:-340.103,-31.9092,0,-334.228,-25.6745,-333.626	1/1:10:0,10,0:0:0:10,0:360,0:-32.7443,-3.0103,0,-32.7443,-3.0103,-32.7443	1/1:28:0,26,2:0:0:26,2:932,72:-83.8336,-7.82678,0,-77.9587,-1.59212,-77.3566	1/2:12:0,4,8:0:0:4,8:144,288:-35.5524,-23.8592,-22.655,-12.052,0,-9.64377	1/2:11:0,4,7:0:0:4,7:144,248:-32.3087,-20.557,-19.3529,-12.1095,0,-10.0023	1/2:21:0,17,4:0:0:17,4:589,144:-59.9482,-12.1095,-6.99199,-48.196,0,-46.9919	1/2:189:0,80,109:0:0:80,109:2830,3924:-551.029,-320.538,-296.456,-230.847,0,-198.034	1/2:301:0,125,176:0:0:125,176:4461,6270:-874.703,-511.229,-473.601,-363.83,0,-310.849	1/1:62:0,60,2:0:0:60,2:2152,72:-193.189,-18.0618,0,-187.314,-11.8271,-186.712	1/2:4:0,1,3:0:0:1,3:36,108:-12.1095,-9.17208,-8.87105,-3.29724,0,-2.39415	1/1:278:0,274,4:0:0:274,4:9808,144:-882.035,-82.4822,0,-870.285,-70.3727,-869.081	1/2:49:0,21,28:0:0:21,28:752,981:-141.494,-80.1722,-73.8506,-61.6764,0,-53.2476	1/2:243:0,90,153:0:0:90,153:3187,5421:-700.48,-441.954,-414.861,-258.879,0,-212.822	1/2:60:0,27,33:0:0:27,33:972,1172:-175.166,-95.8535,-87.7257,-79.6701,0,-69.7361	1/2:61:0,34,27:0:0:34,27:1211,949:-176.27,-77.5946,-67.3595,-99.029,0,-90.9012	1/2:174:0,92,82:0:0:92,82:3250,2940:-504.799,-240.149,-212.455,-265.006,0,-240.322	1/1:99:0,97,2:0:0:97,2:3467,72:-311.847,-29.1999,0,-305.972,-22.9652,-305.37	1/1:239:0,237,2:0:0:237,2:8466,72:-761.099,-71.3441,0,-755.224,-65.1094,-754.622	1/1:165:0,164,1:0:0:164,1:5849,36:-526.01,-49.3689,0,-523.073,-46.0717,-522.772	1/1:175:0,174,1:0:0:174,1:6229,36:-560.142,-52.3792,0,-557.205,-49.082,-556.904	1/2:317:0,157,160:0:0:157,160:5591,5698:-920.308,-464.769,-417.508,-455.894,0,-407.729	1/1:12:0,12,0:0:0:12,0:432,0:-39.2212,-3.61236,0,-39.2212,-3.61236,-39.2212	1/1:188:0,186,2:0:0:186,2:6644,72:-597.623,-55.9916,0,-591.748,-49.7569,-591.146	1/2:111:0,41,70:0:0:41,70:1476,2508:-325.312,-204.886,-192.544,-120.785,0,-99.7125	1/2:31:0,10,21:0:0:10,21:356,747:-90.2439,-61.2287,-58.2184,-29.3709,0,-23.0493	1/2:214:0,88,126:0:0:88,126:3136,4493:-621.521,-366.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chr06	542619	.	A	T	269601	PASS	AB=0.549992;ABP=140.877;AC=140;AF=0.744681;AN=188;AO=10826;CIGAR=1X;DP=13717;DPB=13717;DPRA=0;EPP=11631.2;EPPR=1506.82;GTI=1;LEN=1;MEANALT=1.08511;MQM=59.9822;MQMR=59.9931;NS=94;NUMALT=1;ODDS=4.67747;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=387527;QR=102980;RO=2883;RPL=9220;RPP=11631.2;RPPR=1506.82;RPR=1606;RUN=1;SAF=10826;SAP=23511.4;SAR=0;SRF=2883;SRP=6263.37;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:64:0,64:0:0:64:2296:-206.901,-19.2659,0	1/1:283:0,283:0:0:283:10113:-910.093,-85.1915,0	0/1:204:85,119:85:3044:119:4261:-322.256,0,-212.78	1/1:379:0,379:0:0:379:13585:-1222.42,-114.09,0	0/1:84:36,48:36:1265:48:1719:-129.708,0,-88.8641	0/1:28:15,13:15:540:13:468:-34.0308,0,-40.5077	0/1:100:33,67:33:1157:67:2403:-186.423,0,-74.3315	0/1:270:128,142:128:4596:142:5089:-376.873,0,-332.525	0/1:180:66,114:66:2364:114:4089:-314.009,0,-158.833	0/1:186:82,104:82:2933:104:3695:-276.761,0,-208.211	0/1:104:57,47:57:2036:47:1679:-120.089,0,-152.075	1/1:100:0,100:0:0:100:3565:-321.057,-30.103,0	0/1:70:24,46:24:860:46:1648:-127.536,0,-56.6497	0/1:129:70,59:70:2512:59:2120:-152.236,0,-187.499	1/1:96:0,95:0:0:95:3420:-307.653,-28.5979,0	0/1:60:31,29:31:1108:29:1044:-76.213,0,-81.9692	1/1:129:0,129:0:0:129:4618:-415.736,-38.8329,0	0/1:71:21,49:21:756:49:1756:-136.892,0,-46.9353	1/1:46:0,46:0:0:46:1648:-148.609,-13.8474,0	1/1:316:0,316:0:0:316:11321:-1017.99,-95.1255,0	1/1:252:0,252:0:0:252:8969:-807.186,-75.8596,0	1/1:165:0,165:0:0:165:5907:-531.739,-49.67,0	0/1:124:59,65:59:2112:65:2313:-171.101,0,-153.021	0/1:183:41,142:41:1438:142:5091:-403.244,0,-74.6233	1/1:89:0,89:0:0:89:3167:-285.255,-26.7917,0	0/1:474:213,261:213:7628:261:9349:-698.684,0,-543.868	0/1:343:174,169:174:6210:169:6036:-440.09,0,-455.742	1/1:55:0,55:0:0:55:1967:-177.304,-16.5567,0	0/1:332:168,163:168:5991:163:5856:-427.148,0,-439.292	1/1:299:6,293:6:216:293:10441:-919.82,-70.2175,0	1/1:216:0,216:0:0:216:7735:-696.181,-65.0225,0	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	1/1:24:0,24:0:0:24:851:-76.9095,-7.22472,0	0/1:9:2,7:2:68:7:239:-19.1334,0,-3.74844	0/1:13:5,8:5:180:8:279:-21.5341,0,-12.6387	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:256:111,144:111:3980:144:5158:-387.237,0,-281.267	0/1:167:94,73:94:3357:73:2624:-186.135,0,-252.073	1/1:90:0,90:0:0:90:3184:-286.782,-27.0927,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:222:7,215:7:252:215:7684:-668.561,-43.7997,0	0/1:29:10,19:10:356:19:684:-53.1605,0,-23.6514	0/1:224:97,127:97:3452:127:4547:-341.965,0,-243.464	0/1:130:62,68:62:2223:68:2448:-180.813,0,-161.2	0/1:76:37,39:37:1324:39:1404:-103.781,0,-96.5838	0/1:204:62,142:62:2209:142:5092:-397.013,0,-137.663	1/1:166:0,166:0:0:166:5929:-533.717,-49.971,0	1/1:248:0,248:0:0:248:8899:-800.887,-74.6554,0	1/1:133:1,132:1:36:132:4728:-422.08,-36.4387,0	1/1:303:0,303:0:0:303:10862:-977.476,-91.2121,0	0/1:214:111,103:111:3969:103:3696:-268.421,0,-292.979	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:182:1,181:1:36:181:6466:-578.425,-51.1892,0	0/1:55:19,36:19:680:36:1288:-99.6669,0,-44.9725	0/1:16:8,8:8:288:8:288:-21.4509,0,-21.4509	0/1:186:94,92:94:3361:92:3304:-241.586,0,-246.713	1/1:128:0,128:0:0:128:4596:-413.803,-38.5318,0	0/1:12:9,3:9:320:3:108:-6.46281,0,-25.53	0/1:48:19,29:19:680:29:1040:-79.4649,0,-47.0797	1/1:84:0,84:0:0:84:3016:-271.67,-25.2865,0	0/1:159:78,80:78:2783:80:2861:-209.803,0,-202.788	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	1/1:353:0,353:0:0:353:12663:-1139.43,-106.264,0	1/1:232:2,230:2:72:230:8251:-735.761,-63.0022,0	1/1:116:0,116:0:0:116:4153:-373.951,-34.9195,0	1/1:128:0,128:0:0:128:4591:-413.352,-38.5318,0	1/1:284:3,281:3:108:281:10022:-891.84,-75.4174,0	1/1:128:1,127:1:36:127:4547:-405.798,-34.9336,0	0/1:23:14,9:14:504:9:324:-22.5822,0,-38.7744	1/1:166:0,166:0:0:166:5918:-532.728,-49.971,0	1/1:93:0,93:0:0:93:3333:-300.185,-27.9958,0	0/1:40:19,21:19:669:21:756:-56.326,0,-48.4927	1/1:124:0,124:0:0:124:4452:-400.849,-37.3277,0	0/1:94:46,48:46:1614:48:1709:-125.798,0,-117.248	0/1:433:186,247:186:6644:247:8839:-665.148,0,-467.694	0/1:266:101,165:101:3597:165:5932:-453.911,0,-243.862	1/1:177:0,177:0:0:177:6305:-567.54,-53.2823,0	1/1:222:4,218:4:140:218:7819:-690.79,-53.8841,0	0/1:22:8,14:8:288:14:496:-38.3516,0,-19.6447	1/1:223:1,222:1:36:222:7971:-713.81,-63.5314,0	1/1:161:0,161:0:0:161:5784:-520.672,-48.4658,0	0/1:248:119,128:119:4240:128:4592:-338.729,0,-307.067	1/1:121:1,120:1:36:120:4292:-382.857,-32.8264,0	1/1:83:0,82:0:0:82:2952:-265.553,-24.6845,0	0/1:117:57,59:57:2048:59:2120:-155.878,0,-149.401	1/1:190:1,189:1:36:189:6747:-603.705,-53.5974,0	0/1:54:28,26:28:1008:26:936:-68.3038,0,-74.7807	1/1:70:0,70:0:0:70:2478:-223.271,-21.0721,0	0/1:103:41,62:41:1452:62:2232:-170.137,0,-99.9698	1/1:59:0,59:0:0:59:2101:-189.358,-17.7608,0	0/1:119:48,71:48:1724:71:2541:-193.116,0,-119.623	0/1:70:49,21:49:1760:21:752:-46.9342,0,-137.612	1/1:204:0,204:0:0:204:7291:-656.239,-61.4101,0	1/1:141:3,138:3:108:138:4949:-435.483,-32.3701,0
chr06	542648	.	T	C	343202	PASS	AB=0.483991;ABP=22.6857;AC=140;AF=0.744681;AN=188;AO=13723;CIGAR=1X;DP=18342;DPB=18342;DPRA=0;EPP=29802.1;EPPR=10000.5;GTI=0;LEN=1;MEANALT=1.1383;MQM=59.9319;MQMR=59.9088;NS=94;NUMALT=1;ODDS=4.57746;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=480566;QR=163351;RO=4604;RPL=10654;RPP=9106.68;RPPR=637.661;RPR=3069;RUN=1;SAF=10654;SAP=9106.68;SAR=3069;SRF=2882;SRP=637.661;SRR=1722;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:61:0,61:0:0:61:2089:-188.275,-18.3628,0	1/1:279:0,278:0:0:278:9730:-875.302,-83.6863,0	0/1:267:149,118:149:5276:118:4138:-292.234,0,-394.603	1/1:593:1,591:1:36:591:20678:-1856.4,-174.891,0	0/1:112:60,52:60:2143:52:1829:-131.175,0,-159.422	0/1:48:34,14:34:1220:14:496:-30.5248,0,-95.6574	0/1:177:65,112:65:2297:112:3926:-300.246,0,-153.708	0/1:328:194,134:194:6882:134:4688:-323.35,0,-519.898	0/1:211:98,112:98:3469:112:3941:-291.31,0,-248.819	0/1:231:111,119:111:3956:119:4172:-306.063,0,-286.637	0/1:142:81,61:81:2860:61:2111:-147.511,0,-214.762	1/1:97:1,96:1:36:96:3348:-297.942,-25.6016,0	0/1:101:56,45:56:1978:45:1578:-111.905,0,-147.887	0/1:161:99,62:99:3499:62:2152:-145.482,0,-265.878	1/1:144:1,143:1:36:143:5009:-447.362,-39.75,0	0/1:93:65,28:65:2310:28:995:-61.8682,0,-180.164	1/1:125:0,125:0:0:125:4403:-396.177,-37.6288,0	0/1:85:37,48:37:1324:48:1707:-128.328,0,-93.8745	1/1:46:0,46:0:0:46:1624:-146.449,-13.8474,0	1/1:699:3,695:3:89:695:24453:-2190.99,-202.159,0	1/1:246:0,246:0:0:246:8546:-769.16,-74.0534,0	1/1:257:0,257:0:0:257:9030:-812.682,-77.3647,0	0/1:209:101,108:101:3586:108:3803:-279.539,0,-260.033	0/1:194:55,139:55:1964:139:4846:-377.906,0,-118.633	1/1:90:0,90:0:0:90:3096:-278.869,-27.0927,0	0/1:679:308,371:308:10949:371:13013:-966.491,0,-780.915	0/1:442:273,169:273:9701:169:5956:-403.102,0,-739.499	1/1:53:0,53:0:0:53:1844:-166.239,-15.9546,0	0/1:570:283,285:283:10017:285:9971:-726.026,0,-730.214	1/1:293:8,285:8:288:285:9982:-872.067,-61.9344,0	1/1:283:0,283:0:0:283:9905:-891.417,-85.1915,0	0/1:8:6,2:6:216:2:63:-3.57491,0,-17.3823	1/1:23:0,23:0:0:23:778:-70.3299,-6.92369,0	0/1:8:2,6:2:72:6:208:-16.6508,0,-4.42848	0/1:21:13,8:13:464:8:269:-18.2145,0,-35.7677	1/1:4:0,4:0:0:4:136:-12.5755,-1.20412,0	0/1:469:215,254:215:7611:254:8860:-656.214,0,-542.835	0/1:221:150,71:150:5297:71:2454:-154.584,0,-409.393	1/1:86:0,86:0:0:86:2953:-266.005,-25.8886,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:213:7,206:7:248:206:7229:-628.01,-41.4552,0	0/1:49:30,19:30:1071:19:645:-43.6165,0,-81.9511	0/1:274:147,127:147:5218:127:4451:-318.285,0,-387.174	0/1:185:91,94:91:3226:94:3330:-243.798,0,-234.873	0/1:117:62,55:62:2161:55:1888:-134.973,0,-159.533	0/1:308:110,197:110:3904:197:6924:-530.617,0,-258.913	1/1:160:0,160:0:0:160:5625:-506.379,-48.1648,0	1/1:367:0,366:0:0:366:12931:-1163.25,-110.177,0	1/1:204:2,202:2:72:202:7052:-627.906,-54.5734,0	1/1:372:0,372:0:0:372:12949:-1165.26,-111.983,0	0/1:281:134,146:134:4765:146:5091:-373.692,0,-344.361	1/1:20:0,20:0:0:20:700:-63.3235,-6.0206,0	1/1:179:1,178:1:32:178:6248:-559.227,-50.6851,0	0/1:109:52,57:52:1845:57:1975:-145.209,0,-133.516	0/1:17:9,8:9:324:8:288:-21.1499,0,-24.3883	0/1:257:166,91:166:5901:91:3218:-212.48,0,-453.769	1/1:159:0,159:0:0:159:5561:-500.616,-47.8638,0	0/1:16:9,7:9:316:7:248:-17.8477,0,-23.9624	0/1:48:17,31:17:590:31:1070:-82.1516,0,-38.9747	1/1:84:0,84:0:0:84:2949:-265.646,-25.2865,0	0/1:227:111,116:111:3951:116:4051:-296.45,0,-287.449	0/1:15:7,8:7:244:8:288:-21.7425,0,-17.784	1/1:543:1,541:1:36:541:19028:-1708.54,-159.89,0	1/1:371:4,365:4:144:365:12849:-1142.95,-98.0963,0	1/1:118:0,118:0:0:118:4133:-372.159,-35.5215,0	1/1:231:0,231:0:0:231:8146:-733.162,-69.5379,0	1/1:378:3,374:3:108:374:13085:-1167.43,-103.661,0	1/1:232:4,228:4:140:228:8035:-710.084,-56.8944,0	0/1:46:37,9:37:1316:9:320:-15.295,0,-104.89	1/1:161:0,161:0:0:161:5610:-505.033,-48.4658,0	1/1:137:0,137:0:0:137:4793:-431.532,-41.2411,0	0/1:50:24,26:24:864:26:911:-67.2511,0,-63.0311	1/1:125:0,125:0:0:125:4361:-392.672,-37.6288,0	0/1:132:84,48:84:2953:48:1666:-110.488,0,-226.27	0/1:460:221,239:221:7849:239:8406:-618.084,0,-567.968	0/1:465:247,218:247:8813:218:7658:-549.28,0,-652.243	1/1:173:0,173:0:0:173:6075:-546.862,-52.0782,0	1/1:222:4,218:4:144:218:7613:-671.911,-53.515,0	0/1:23:9,14:9:320:14:496:-38.0506,0,-22.2187	1/1:218:3,215:3:108:215:7555:-669.928,-55.5494,0	1/1:160:0,160:0:0:160:5564:-500.899,-48.1648,0	0/1:356:171,185:171:6101:185:6373:-466.494,0,-442.025	1/1:165:1,164:1:32:164:5708:-510.648,-46.4706,0	1/1:145:1,144:1:36:144:5068:-452.641,-40.0511,0	0/1:140:71,69:71:2517:69:2442:-177.891,0,-184.637	1/1:309:2,306:2:72:306:10721:-958.027,-86.1471,0	0/1:61:34,27:34:1220:27:960:-68.3534,0,-91.744	1/1:65:0,65:0:0:65:2280:-205.461,-19.567,0	0/1:140:78,62:78:2771:62:2180:-154.323,0,-207.488	1/1:59:0,59:0:0:59:2045:-184.32,-17.7608,0	0/1:158:86,72:86:3028:72:2560:-183.087,0,-225.059	0/1:122:88,34:88:3083:34:1181:-69.8645,0,-240.702	1/1:340:0,340:0:0:340:11800:-1061.79,-102.35,0	1/1:214:2,212:2:72:212:7417:-660.742,-57.5837,0
chr06	999488	.	TCTGT	CCTGG,CCTCG	224081	PASS	AB=0.513361,0.479332;ABP=10.4377,20.7828;AC=143,45;AF=0.760638,0.239362;AN=188;AO=8329,2316;CIGAR=1X3M1X,1X2M2X;DP=10727;DPB=10727.2;DPRA=0,1.3696;EPP=18089.2,5032.14;EPPR=5.18177;GTI=2;LEN=5,5;MEANALT=2.42553,2.88136;MQM=47.0831,59.1991;MQMR=60;NS=94;NUMALT=2;ODDS=1.29746;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=294234,81958;QR=36;RO=1;RPL=0,0;RPP=18089.2,5032.14;RPPR=5.18177;RPR=8329,2316;RUN=1,1;SAF=8329,2316;SAP=18089.2,5032.14;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:89:0,88,0:0:0:88,0:3112,0:-277.969,-26.4906,0,-277.969,-26.4906,-277.969	1/1:150:0,146,1:0:0:146,1:5154,36:-458.182,-43.9504,0,-455.562,-41.3207,-455.261	1/2:100:0,55,45:0:0:55,45:1908,1588:-283.419,-129.648,-113.091,-154.12,0,-140.574	1/1:297:0,294,0:0:0:294,0:10391,0:-924.671,-88.5028,0,-924.671,-88.5028,-924.671	1/2:100:0,46,54:0:0:46,54:1642,1914:-289.103,-156.264,-142.417,-133.193,0,-116.937	1/2:70:0,38,32:0:0:38,32:1332,1143:-200.611,-93.5463,-82.1072,-107.417,0,-97.7844	1/1:147:0,146,0:0:0:146,0:5165,0:-459.723,-43.9504,0,-459.723,-43.9504,-459.723	1/2:166:0,86,78:0:0:86,78:3005,2747:-466.3,-223.507,-197.619,-242.807,0,-219.326	1/2:121:0,52,67:0:0:52,67:1848,2382:-343.408,-194.138,-178.484,-149.34,0,-129.171	1/2:117:0,72,43:0:0:72,43:2544,1506:-327.3,-122.409,-100.735,-204.883,0,-191.939	1/2:76:0,35,39:0:0:35,39:1223,1393:-211.437,-113.608,-103.071,-97.8626,0,-86.1225	1/1:69:0,69,0:0:0:69,0:2427,0:-217.142,-20.7711,0,-217.142,-20.7711,-217.142	1/2:74:0,42,32:0:0:42,32:1494,1135:-212.365,-92.8172,-80.174,-119.9,0,-110.267	1/2:52:0,28,24:0:0:28,24:982,861:-149.664,-70.5851,-62.1563,-79.432,0,-72.2072	1/1:77:0,76,0:0:0:76,0:2707,0:-241.061,-22.8783,0,-241.061,-22.8783,-241.061	1/2:54:0,18,35:0:0:18,35:636,1249:-152.347,-101.805,-96.3864,-50.5326,0,-39.9966	1/1:67:0,67,0:0:0:67,0:2371,0:-212.076,-20.169,0,-212.076,-20.169,-212.076	1/2:60:0,34,26:0:0:34,26:1207,911:-171.899,-74.442,-64.207,-97.8074,0,-89.9807	1/1:47:0,47,0:0:0:47,0:1660,0:-148.868,-14.1484,0,-148.868,-14.1484,-148.868	1/1:206:0,204,1:0:0:204,1:7228,31:-643.232,-61.4101,0,-641.52,-59.7459,-641.219	1/2:177:0,80,96:0:0:80,96:2796,3370:-499.051,-274.048,-249.966,-224.991,0,-196.092	1/1:185:0,185,0:0:0:185,0:6481,0:-576.915,-55.6906,0,-576.915,-55.6906,-576.915	1/2:103:0,53,50:0:0:53,50:1868,1756:-293.329,-142.99,-127.035,-150.689,0,-135.638	1/2:192:0,141,51:0:0:141,51:4997,1815:-550.075,-148.206,-105.761,-402.223,0,-386.87	1/1:97:0,96,0:0:0:96,0:3393,0:-302.93,-28.8989,0,-302.93,-28.8989,-302.93	1/1:411:0,407,1:0:0:407,1:14390,36:-1276.4,-122.519,0,-1273.47,-119.581,-1273.17	1/2:185:0,95,89:0:0:95,89:3374,3162:-529.558,-257.356,-228.759,-272.279,0,-245.487	1/1:29:0,29,0:0:0:29,0:1030,0:-92.0205,-8.72987,0,-92.0205,-8.72987,-92.0205	1/2:343:0,162,179:0:0:162,179:5733,6331:-975.483,-515.566,-466.799,-459.919,0,-406.035	1/2:110:0,62,48:0:0:62,48:2186,1683:-313.528,-137.268,-118.604,-176.611,0,-162.161	1/1:154:0,154,0:0:0:154,0:5414,0:-482.293,-46.3586,0,-482.293,-46.3586,-482.293	1/2:14:0,3,11:0:0:3,11:108,395:-41.3119,-32.567,-31.6639,-9.10253,0,-5.7912	1/1:23:0,22,0:0:0:22,0:780,0:-69.7613,-6.62266,0,-69.7613,-6.62266,-69.7613	1/2:14:0,12,2:0:0:12,2:425,72:-40.6564,-6.23466,-2.6223,-34.7805,0,-34.1784	1/2:20:0,4,16:0:0:4,16:144,572:-58.6658,-46.9862,-45.7821,-12.0373,0,-7.22084	1/1:14:0,14,0:0:0:14,0:490,0:-44.2091,-4.21442,0,-44.2091,-4.21442,-44.2091	1/2:245:1,122,121:1:36:122,121:4310,4281:-691.78,-345.47,-311.681,-343.68,0,-310.193	1/1:288:0,286,1:0:0:286,1:10091,36:-899.669,-86.0946,0,-896.732,-83.1396,-896.431	1/1:66:0,66,0:0:0:66,0:2332,0:-208.718,-19.868,0,-208.718,-19.868,-208.718	1/2:12:0,5,7:0:0:5,7:178,251:-34.9353,-20.8306,-19.3255,-14.4564,0,-12.3492	1/1:135:0,132,2:0:0:132,2:4680,69:-417.799,-39.736,0,-412.193,-34.1402,-411.591	1/1:48:0,47,0:0:0:47,0:1670,0:-148.849,-14.1484,0,-148.849,-14.1484,-148.849	1/2:142:0,62,80:0:0:62,80:2158,2825:-403.908,-230.391,-211.728,-173.864,0,-149.782	1/2:83:0,41,42:0:0:41,42:1448,1493:-237.822,-122.003,-109.661,-116.171,0,-103.527	1/2:87:0,49,37:0:0:49,37:1716,1323:-244.79,-107.657,-92.9068,-137.192,0,-126.054	1/2:120:0,72,46:0:0:72,46:2534,1624:-336.349,-132.243,-110.569,-204.117,0,-190.27	1/1:154:0,153,0:0:0:153,0:5433,0:-485.707,-46.0576,0,-485.707,-46.0576,-485.707	1/1:188:0,182,0:0:0:182,0:6427,0:-572.11,-54.7875,0,-572.11,-54.7875,-572.11	1/1:140:0,138,1:0:0:138,1:4867,25:-433.107,-41.5421,0,-431.318,-39.8137,-431.017	1/2:155:0,67,88:0:0:67,88:2387,3091:-444.161,-251.89,-231.721,-192.622,0,-166.132	1/2:258:0,178,78:0:0:178,78:6283,2763:-727.794,-225,-171.417,-502.786,0,-479.306	1/1:21:0,20,0:0:0:20,0:716,0:-63.8647,-6.0206,0,-63.8647,-6.0206,-63.8647	1/1:144:0,143,0:0:0:143,0:5072,0:-452.093,-43.0473,0,-452.093,-43.0473,-452.093	1/2:58:0,33,25:0:0:33,25:1165,894:-167.227,-73.1926,-63.2586,-94.3883,0,-86.8625	1/2:6:0,4,2:0:0:4,2:143,66:-17.268,-5.6573,-4.45318,-11.9488,0,-11.3467	1/2:210:0,106,101:0:0:106,101:3726,3585:-592.34,-291.777,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chr06	999507	.	C	T	172003	PASS	AB=0.513077;ABP=9.99567;AC=143;AF=0.760638;AN=188;AO=8198;CIGAR=1X;DP=10505;DPB=10505;DPRA=0;EPP=17770;EPPR=5003.91;GTI=1;LEN=1;MEANALT=1.04255;MQM=47.0544;MQMR=59.254;NS=94;NUMALT=1;ODDS=1.36404;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=293288;QR=82195;RO=2303;RPL=8194;RPP=17770;RPPR=5003.91;RPR=4;RUN=1;SAF=8198;SAP=17804.7;SAR=0;SRF=2303;SRP=5003.91;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:86:0,86:0:0:86:3064:-273.938,-25.8886,0	1/1:146:0,146:0:0:146:5208:-461.889,-43.9504,0	0/1:100:45,55:45:1601:55:1963:-145.473,0,-114.26	1/1:290:0,290:0:0:290:10380:-921.609,-87.2987,0	0/1:99:53,46:53:1892:46:1648:-117.757,0,-140.739	0/1:69:32,37:32:1148:37:1320:-96.8521,0,-82.8588	1/1:144:0,144:0:0:144:5126:-456.186,-43.3483,0	0/1:164:78,86:78:2788:86:3080:-226.054,0,-201.566	0/1:120:67,53:67:2412:53:1900:-133.467,0,-180.831	0/1:115:44,71:44:1548:71:2526:-190.208,0,-104.707	0/1:75:40,35:40:1427:35:1245:-88.321,0,-106.107	1/1:69:1,68:1:21:68:2411:-213.792,-18.6711,0	0/1:71:32,39:32:1127:39:1391:-102.376,0,-80.346	0/1:49:24,25:24:856:25:880:-64.2136,0,-62.6083	1/1:76:0,76:0:0:76:2717:-241.997,-22.8783,0	0/1:53:35,18:35:1247:18:648:-41.4033,0,-96.5649	1/1:66:0,66:0:0:66:2321:-207.607,-19.868,0	0/1:60:26,34:26:923:34:1202:-89.5122,0,-65.2856	1/1:47:0,47:0:0:47:1669:-149.406,-14.1484,0	1/1:195:0,195:0:0:195:6996:-621.87,-58.7009,0	0/1:175:96,78:96:3374:78:2808:-197.273,0,-250.798	1/1:181:0,181:0:0:181:6483:-576.602,-54.4864,0	0/1:101:50,51:50:1788:51:1832:-132.944,0,-130.467	0/1:185:51,134:51:1836:134:4796:-371.159,0,-109.73	1/1:95:0,95:0:0:95:3408:-304.234,-28.5979,0	1/1:395:1,394:1:36:394:14128:-1251,-115.324,0	0/1:182:87,95:87:3103:95:3412:-249.063,0,-224.406	1/1:29:0,29:0:0:29:1040:-92.8554,-8.72987,0	0/1:340:179,161:179:6411:161:5758:-408.1,0,-474.59	0/1:107:48,59:48:1707:59:2103:-155.459,0,-121.664	1/1:149:0,149:0:0:149:5335:-475.014,-44.8535,0	0/1:14:11,3:11:388:3:108:-5.7912,0,-31.0291	1/1:23:0,23:0:0:23:824:-73.6888,-6.92369,0	0/1:14:2,12:2:72:12:432:-34.7941,0,-2.6223	0/1:20:16,4:16:576:4:144:-7.22084,0,-46.1406	1/1:14:0,14:0:0:14:500:-45.0984,-4.21442,0	0/1:240:120,119:120:4304:119:4261:-306.325,0,-314.775	1/1:280:1,279:1:36:279:9997:-886.947,-80.6901,0	1/1:64:0,64:0:0:64:2287:-204.65,-19.2659,0	0/1:12:7,5:7:252:5:180:-12.5243,0,-19.4166	1/1:134:2,132:2:72:132:4733:-415.98,-33.5013,0	1/1:47:0,47:0:0:47:1683:-150.223,-14.1484,0	0/1:139:79,60:79:2840:60:2152:-149.857,0,-213.967	0/1:81:41,40:41:1468:40:1417:-101.256,0,-108.013	0/1:84:36,48:36:1296:48:1719:-126.316,0,-91.6425	0/1:116:45,71:45:1616:71:2543:-191.528,0,-110.765	1/1:152:0,152:0:0:152:5407:-482.982,-45.7566,0	1/1:183:0,183:0:0:183:6563:-582.742,-55.0885,0	1/1:135:1,134:1:36:134:4812:-425.092,-37.9028,0	0/1:153:87,66:87:3091:66:2363:-164.638,0,-232.323	0/1:254:79,175:79:2817:175:6288:-479.652,0,-177.204	1/1:20:0,20:0:0:20:720:-64.5593,-6.0206,0	1/1:142:0,142:0:0:142:5088:-453.684,-42.7463,0	0/1:58:25,33:25:900:33:1188:-88.8459,0,-63.7925	0/1:5:2,3:2:72:3:108:-8.5154,0,-5.32298	0/1:204:100,104:100:3560:104:3708:-269.446,0,-258.844	1/1:87:0,87:0:0:87:3120:-276.42,-26.1896,0	0/1:19:9,10:9:324:10:360:-26.4042,0,-23.7863	0/1:31:28,3:28:991:3:108:-0.655145,0,-80.1253	1/1:75:0,75:0:0:75:2695:-239.874,-22.5773,0	1/1:113:3,110:3:108:110:3959:-342.02,-23.9412,0	0/1:9:8,1:8:288:1:36:-0.857543,0,-23.5581	1/1:247:0,247:0:0:247:8873:-787.568,-74.3544,0	1/1:268:1,267:1:32:267:9543:-843.686,-77.4771,0	1/1:65:0,65:0:0:65:2309:-206.056,-19.567,0	1/1:94:0,94:0:0:94:3368:-299.175,-28.2968,0	1/1:182:2,180:2:72:180:6460:-566.95,-47.9507,0	1/1:136:1,135:1:36:135:4844:-426.62,-37.3418,0	1/1:16:0,16:0:0:16:576:-51.5269,-4.81648,0	1/1:106:0,106:0:0:106:3786:-338.405,-31.9092,0	1/1:87:0,87:0:0:87:3083:-274.719,-26.1896,0	0/1:31:18,13:18:648:13:468:-32.7565,0,-48.5393	1/1:40:0,40:0:0:40:1435:-125.86,-12.0412,0	0/1:61:47,14:47:1684:14:504:-26.7897,0,-133.404	0/1:182:49,132:49:1756:132:4731:-366.633,0,-102.989	0/1:171:100,71:100:3561:71:2556:-176.064,0,-269.121	1/1:103:0,103:0:0:103:3675:-328.43,-31.0061,0	1/1:106:0,106:0:0:106:3812:-339.573,-31.9092,0	0/1:26:12,13:12:432:13:468:-33.4337,0,-31.3236	1/1:139:2,137:2:72:137:4919:-431.797,-35.0064,0	1/1:121:0,121:0:0:121:4310:-383.598,-36.4246,0	0/1:254:110,144:110:3921:144:5137:-379.571,0,-276.552	1/1:95:0,95:0:0:95:3384:-301.137,-28.5979,0	1/1:54:0,54:0:0:54:1935:-172.175,-16.2556,0	0/1:105:56,49:56:1986:49:1745:-123.997,0,-147.369	1/1:152:2,150:2:72:150:5316:-465.506,-38.9198,0	0/1:47:24,23:24:864:23:809:-57.4499,0,-63.8989	1/1:76:0,76:0:0:76:2714:-242.341,-22.8783,0	0/1:96:51,45:51:1828:45:1620:-116.355,0,-135.848	1/1:52:0,52:0:0:52:1859:-164.514,-15.6536,0	0/1:123:70,53:70:2489:53:1904:-133.439,0,-187.165	0/1:89:67,22:67:2390:22:783:-43.0547,0,-188.295	1/1:131:0,131:0:0:131:4703:-416.563,-39.4349,0	1/1:95:0,95:0:0:95:3358:-299.618,-28.5979,0
chr06	999512	.	A	G	171063	PASS	AB=0.512761;ABP=9.66049;AC=143;AF=0.760638;AN=188;AO=8195;CIGAR=1X;DP=10509;DPB=10509;DPRA=0;EPP=17780.9;EPPR=5012.6;GTI=1;LEN=1;MEANALT=1.05319;MQM=47.0415;MQMR=59.2484;NS=94;NUMALT=1;ODDS=0.735687;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=292433;QR=82720;RO=2307;RPL=8193;RPP=17780.9;RPPR=5012.6;RPR=2;RUN=1;SAF=8195;SAP=17798.2;SAR=0;SRF=2307;SRP=5012.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:87:0,87:0:0:87:3085:-275.83,-26.1896,0	1/1:144:0,144:0:0:144:5156:-457.365,-43.3483,0	0/1:97:45,52:45:1608:52:1853:-136.653,0,-115.795	1/1:288:0,288:0:0:288:10270:-912.561,-86.6966,0	0/1:97:52,45:52:1864:45:1616:-115.49,0,-138.822	0/1:68:32,36:32:1152:36:1292:-94.3389,0,-83.5201	1/1:144:0,143:0:0:143:5113:-454.345,-43.0473,0	0/1:165:79,86:79:2821:86:3064:-224.324,0,-204.375	0/1:121:68,51:68:2448:51:1832:-127.316,0,-184.013	0/1:112:44,68:44:1576:68:2427:-182.758,0,-108.402	0/1:75:40,35:40:1440:35:1247:-88.2185,0,-107.278	1/1:68:1,67:1:36:67:2380:-209.235,-16.8718,0	0/1:72:31,41:31:1104:41:1457:-107.688,0,-77.9776	0/1:51:24,27:24:860:27:944:-69.0767,0,-62.367	1/1:75:0,75:0:0:75:2678:-238.558,-22.5773,0	0/1:52:35,17:35:1260:17:612:-38.4879,0,-98.0378	1/1:67:0,67:0:0:67:2383:-213.155,-20.169,0	0/1:60:26,34:26:932:34:1216:-90.7843,0,-66.0823	1/1:47:0,47:0:0:47:1646:-147.37,-14.1484,0	1/1:198:1,197:1:36:197:7046:-622.341,-56.0057,0	0/1:174:96,78:96:3432:78:2789:-195.979,0,-256.246	1/1:182:0,182:0:0:182:6504:-578.329,-54.7875,0	0/1:101:49,52:49:1756:52:1872:-136.492,0,-127.588	0/1:188:51,137:51:1836:137:4896:-379.223,0,-108.827	1/1:96:0,96:0:0:96:3439:-307.004,-28.8989,0	1/1:405:1,404:1:36:404:14450:-1276.92,-118.334,0	0/1:182:88,94:88:3147:94:3358:-244.285,0,-228.087	1/1:29:0,29:0:0:29:1036:-92.5083,-8.72987,0	0/1:338:176,161:176:6312:161:5764:-408.932,0,-466.256	0/1:106:48,58:48:1728:58:2071:-153.187,0,-123.855	1/1:148:0,148:0:0:148:5286:-470.67,-44.5524,0	0/1:12:10,2:10:360:2:72:-3.17716,0,-29.1181	1/1:22:0,22:0:0:22:792:-71.1162,-6.62266,0	0/1:14:2,12:2:72:12:432:-34.7941,0,-2.6223	0/1:20:16,4:16:576:4:144:-7.22084,0,-46.1406	1/1:13:0,13:0:0:13:464:-41.8817,-3.91339,0	0/1:239:120,119:120:4312:119:4207:-302.407,0,-315.798	1/1:284:1,283:1:36:283:10119:-897.765,-81.8942,0	1/1:63:0,63:0:0:63:2244:-200.354,-18.9649,0	0/1:12:7,5:7:244:5:180:-12.5243,0,-18.6871	1/1:132:2,130:2:68:130:4672:-410.631,-33.2783,0	1/1:47:0,47:0:0:47:1667:-148.781,-14.1484,0	0/1:140:80,60:80:2872:60:2144:-148.452,0,-216.553	0/1:82:41,41:41:1467:41:1447:-103.886,0,-107.627	0/1:85:37,48:37:1328:48:1703:-124.977,0,-94.089	0/1:117:47,70:47:1688:70:2512:-188.46,0,-116.941	1/1:151:0,151:0:0:151:5391:-481.534,-45.4555,0	1/1:188:0,188:0:0:188:6730:-597.703,-56.5936,0	1/1:137:1,136:1:36:136:4856:-429.069,-38.5049,0	0/1:154:87,67:87:3128:67:2408:-167.692,0,-235.329	0/1:253:80,173:80:2860:173:6182:-470.765,0,-181.369	1/1:21:0,21:0:0:21:752:-67.4253,-6.32163,0	1/1:139:0,137:0:0:137:4882:-434.935,-41.2411,0	0/1:58:25,33:25:896:33:1188:-88.8459,0,-63.4318	0/1:6:2,4:2:72:4:140:-11.077,0,-5.02195	0/1:209:101,108:101:3612:108:3850:-280.541,0,-262.007	1/1:89:0,89:0:0:89:3151:-279.371,-26.7917,0	0/1:19:9,10:9:309:10:360:-26.4042,0,-22.4211	0/1:31:28,3:28:995:3:108:-0.655145,0,-80.2617	1/1:72:0,72:0:0:72:2588:-230.417,-21.6742,0	1/1:116:3,113:3:108:113:4032:-348.61,-24.8443,0	0/1:9:8,1:8:288:1:36:-0.857543,0,-23.5581	1/1:245:0,245:0:0:245:8703:-773.142,-73.7524,0	1/1:269:1,268:1:36:268:9556:-844.837,-77.3798,0	1/1:64:0,64:0:0:64:2260:-201.708,-19.2659,0	1/1:90:0,90:0:0:90:3212:-285.765,-27.0927,0	1/1:182:2,180:2:72:180:6417:-563.562,-47.9507,0	1/1:133:1,132:1:36:132:4720:-416.415,-36.4387,0	1/1:16:0,16:0:0:16:576:-51.5269,-4.81648,0	1/1:102:0,102:0:0:102:3647:-326.195,-30.7051,0	1/1:87:0,87:0:0:87:3094:-275.747,-26.1896,0	0/1:28:15,13:15:536:13:464:-33.3143,0,-39.6522	1/1:40:0,40:0:0:40:1427:-125.16,-12.0412,0	0/1:60:47,13:47:1688:13:468:-23.8696,0,-134.067	0/1:179:52,127:52:1872:127:4529:-349.44,0,-114.371	0/1:172:101,71:101:3617:71:2544:-174.735,0,-273.562	1/1:101:0,101:0:0:101:3610:-322.975,-30.404,0	1/1:105:0,105:0:0:105:3768:-336.265,-31.6082,0	0/1:26:13,13:13:468:13:468:-33.7958,0,-34.6013	1/1:139:2,137:2:72:137:4915:-431.44,-35.0064,0	1/1:121:0,121:0:0:121:4301:-382.561,-36.4246,0	0/1:259:109,150:109:3912:150:5338:-395.818,0,-274.259	1/1:96:0,96:0:0:96:3416:-303.675,-28.8989,0	1/1:53:0,53:0:0:53:1881:-167.455,-15.9546,0	0/1:107:55,52:55:1972:52:1821:-130.135,0,-145.503	1/1:153:3,149:3:108:149:5268:-458.273,-36.0389,0	0/1:45:24,21:24:860:21:748:-51.7203,0,-64.1755	1/1:77:0,77:0:0:77:2746:-245.174,-23.1793,0	0/1:98:53,45:53:1904:45:1616:-115.403,0,-142.083	1/1:49:0,49:0:0:49:1756:-155.619,-14.7505,0	0/1:123:70,53:70:2520:53:1883:-131.653,0,-189.941	0/1:86:65,21:65:2336:21:752:-41.3569,0,-184.611	1/1:136:0,136:0:0:136:4841:-428.458,-40.9401,0	1/1:97:0,97:0:0:97:3453:-307.387,-29.1999,0
chr06	1045709	.	G	A	173185	PASS	AB=0.501523;ABP=3.1029;AC=143;AF=0.760638;AN=188;AO=8226;CIGAR=1X;DP=10529;DPB=10529;DPRA=0;EPP=17865.5;EPPR=5003.91;GTI=1;LEN=1;MEANALT=1;MQM=59.9988;MQMR=60;NS=94;NUMALT=1;ODDS=0.871835;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=291271;QR=80223;RO=2303;RPL=0;RPP=17865.5;RPPR=5003.91;RPR=8226;RUN=1;SAF=0;SAP=17865.5;SAR=8226;SRF=0;SRP=5003.91;SRR=2303;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:38:0,38:0:0:38:1321:-119.187,-11.4391,0	1/1:160:0,160:0:0:160:5683:-511.591,-48.1648,0	0/1:126:48,78:48:1685:78:2768:-211.43,0,-114.004	1/1:194:0,194:0:0:194:6896:-620.71,-58.3998,0	0/1:94:33,61:33:1157:61:2148:-165.289,0,-76.1376	0/1:56:23,33:23:815:33:1176:-89.2901,0,-56.8131	1/1:166:1,165:1:36:165:5826:-520.862,-46.3727,0	0/1:169:82,87:82:2759:87:3086:-227.094,0,-197.673	0/1:85:46,39:46:1599:39:1367:-97.7374,0,-118.608	0/1:139:53,86:53:1831:86:3022:-230.368,0,-123.222	0/1:65:34,31:34:1178:31:1103:-80.0129,0,-86.7558	1/1:79:0,79:0:0:79:2791:-251.429,-23.7814,0	0/1:46:25,21:25:870:21:751:-54.0687,0,-64.7672	0/1:98:50,48:50:1749:48:1690:-122.884,0,-128.191	1/1:66:0,66:0:0:66:2313:-208.43,-19.868,0	0/1:43:16,27:16:546:27:964:-74.1325,0,-36.5175	1/1:85:0,85:0:0:85:3027:-272.661,-25.5876,0	0/1:51:24,27:24:832:27:968:-72.0848,0,-59.8442	1/1:36:0,36:0:0:36:1283:-115.773,-10.8371,0	1/1:241:0,241:0:0:241:8589:-773.008,-72.5482,0	0/1:199:123,76:123:4300:76:2680:-181.54,0,-327.275	1/1:153:0,153:0:0:153:5438:-489.551,-46.0576,0	0/1:34:16,18:16:572:18:639:-47.6032,0,-41.5784	0/1:147:59,88:59:2053:88:3103:-235.232,0,-140.787	1/1:80:0,80:0:0:80:2823:-254.308,-24.0824,0	1/1:358:0,358:0:0:358:12702:-1143.01,-107.769,0	0/1:315:156,159:156:5437:159:5672:-415.775,0,-394.641	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	0/1:336:169,167:169:5927:167:5928:-432.484,0,-432.397	0/1:223:112,111:112:3885:111:3964:-289.822,0,-282.714	1/1:124:0,124:0:0:124:4397:-395.903,-37.3277,0	0/1:5:3,2:3:104:2:72:-5.33157,0,-8.19766	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:11:0,11:0:0:11:372:-33.8038,-3.31133,0	0/1:206:106,100:106:3629:100:3519:-254.91,0,-264.806	1/1:268:0,268:0:0:268:9491:-854.156,-80.676,0	1/1:81:0,81:0:0:81:2821:-254.127,-24.3834,0	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:180:1,179:1:36:179:6361:-568.984,-50.5871,0	1/1:41:0,41:0:0:41:1429:-128.901,-12.3422,0	0/1:228:144,84:144:4973:84:2962:-198.177,0,-379.093	0/1:82:42,40:42:1456:40:1416:-103.053,0,-106.647	0/1:40:15,25:15:517:25:880:-67.4765,0,-34.8134	0/1:188:103,85:103:3631:85:3008:-214.358,0,-270.401	1/1:155:1,154:1:36:154:5442:-486.31,-43.0614,0	1/1:167:0,167:0:0:167:5934:-534.171,-50.272,0	1/1:152:0,152:0:0:152:5376:-483.976,-45.7566,0	0/1:185:97,88:97:3436:88:3143:-227.405,0,-253.763	0/1:164:82,82:82:2887:82:2920:-213.666,0,-210.697	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	1/1:130:0,130:0:0:130:4606:-414.705,-39.1339,0	0/1:90:53,37:53:1851:37:1324:-92.3694,0,-139.774	0/1:20:14,6:14:480:6:216:-13.7699,0,-37.5032	0/1:135:67,68:67:2333:68:2368:-172.734,0,-169.589	1/1:23:0,23:0:0:23:804:-72.6766,-6.92369,0	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/1:21:17,4:17:603:4:144:-6.99199,0,-48.2779	1/1:80:0,80:0:0:80:2852:-256.919,-24.0824,0	1/1:99:0,99:0:0:99:3490:-314.312,-29.802,0	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	1/1:216:0,216:0:0:216:7645:-688.092,-65.0225,0	1/1:324:2,322:2:72:322:11425:-1021.3,-90.697,0	1/1:74:0,74:0:0:74:2627:-236.677,-22.2762,0	1/1:78:0,78:0:0:78:2744:-247.203,-23.4803,0	1/1:186:2,184:2:72:184:6475:-576.004,-49.1549,0	1/1:140:3,137:3:108:137:4857:-427.209,-32.069,0	1/1:37:0,37:0:0:37:1307:-117.93,-11.1381,0	1/1:108:0,108:0:0:108:3833:-345.168,-32.5112,0	1/1:94:0,94:0:0:94:3297:-296.951,-28.2968,0	0/1:15:9,6:9:316:6:216:-15.2751,0,-24.2634	1/1:238:0,238:0:0:238:8352:-751.698,-71.6451,0	0/1:54:25,29:25:845:29:1044:-78.0192,0,-60.1013	0/1:169:90,79:90:3167:79:2780:-199.564,0,-234.381	0/1:161:77,84:77:2702:84:2967:-218.796,0,-194.957	1/1:160:0,160:0:0:160:5667:-510.151,-48.1648,0	1/1:97:1,96:1:36:96:3421:-304.506,-25.6016,0	0/1:6:5,1:5:165:1:36:-1.79209,0,-13.3674	1/1:121:0,121:0:0:121:4256:-383.22,-36.4246,0	1/1:121:0,121:0:0:121:4254:-383.04,-36.4246,0	0/1:205:89,116:89:3111:116:4139:-310.984,0,-218.505	1/1:116:0,116:0:0:116:4089:-368.202,-34.9195,0	1/1:59:0,59:0:0:59:2068:-186.389,-17.7608,0	0/1:93:40,53:40:1407:53:1861:-139.769,0,-98.9307	1/1:179:0,179:0:0:179:6335:-570.251,-53.8844,0	0/1:38:25,13:25:863:13:468:-31.0205,0,-66.545	1/1:59:0,59:0:0:59:2105:-189.72,-17.7608,0	0/1:63:26,37:26:907:37:1311:-99.326,0,-62.9795	1/1:55:0,55:0:0:55:1950:-175.775,-16.5567,0	0/1:98:38,60:38:1320:60:2099:-159.678,0,-89.5957	0/1:74:40,34:40:1353:34:1211:-87.0193,0,-99.7851	1/1:146:0,146:0:0:146:5204:-468.499,-43.9504,0	1/1:87:1,86:1:36:86:3084:-274.189,-22.5913,0
chr06	1061462	.	G	A	126642	PASS	AB=0.464837;ABP=40.5771;AC=144;AF=0.765957;AN=188;AO=6031;CIGAR=1X;DP=7920;DPB=7920;DPRA=0;EPP=13090.5;EPPR=3831.4;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.7856;MQMR=59.922;NS=94;NUMALT=1;ODDS=7.43445;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=213752;QR=67464;RO=1885;RPL=1;RPP=13090.5;RPPR=3831.4;RPR=6030;RUN=1;SAF=6031;SAP=13099.2;SAR=0;SRF=1885;SRP=4096.24;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:31:0,31:0:0:31:1108:-100.029,-9.33193,0	1/1:109:0,109:0:0:109:3856:-347.234,-32.8123,0	0/1:155:112,43:112:4004:43:1498:-88.4494,0,-313.887	1/1:172:0,171:0:0:171:6092:-547.947,-51.4761,0	0/1:107:53,54:53:1895:54:1928:-141.586,0,-138.616	0/1:46:18,28:18:648:28:1004:-76.8285,0,-44.8045	1/1:145:1,144:1:36:144:5119:-457.253,-40.0511,0	0/1:143:73,70:73:2615:70:2508:-182.92,0,-192.55	0/1:107:46,61:46:1656:61:2168:-163.175,0,-117.118	0/1:76:37,39:37:1332:39:1392:-102.624,0,-97.3041	0/1:25:10,15:10:360:15:528:-40.3256,0,-25.2186	1/1:24:0,24:0:0:24:854:-77.1785,-7.22472,0	0/1:43:29,14:29:1036:14:500:-32.3919,0,-80.6096	0/1:35:20,15:20:716:15:532:-37.6752,0,-54.2317	1/1:24:0,24:0:0:24:854:-77.1803,-7.22472,0	0/1:32:15,17:15:536:17:592:-43.973,0,-38.9335	1/1:28:0,28:0:0:28:996:-89.954,-8.42884,0	0/1:24:14,10:14:500:10:360:-25.5187,0,-38.1115	1/1:15:0,15:0:0:15:540:-48.9342,-4.51545,0	1/1:216:1,215:1:36:215:7534:-674.369,-61.4242,0	0/1:102:56,46:56:2008:46:1640:-117.183,0,-150.288	1/1:128:0,127:0:0:127:4513:-405.578,-38.2308,0	0/1:100:51,49:51:1827:49:1736:-126.417,0,-134.584	0/1:107:68,39:68:2422:39:1385:-92.7357,0,-186.025	1/1:106:0,106:0:0:106:3769:-339.389,-31.9092,0	1/1:238:1,237:1:36:237:8388:-751.192,-68.0469,0	0/1:153:87,66:87:3116:66:2336:-164.44,0,-234.609	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	0/1:290:153,137:153:5496:137:4853:-349.576,0,-407.196	0/1:150:79,71:79:2823:71:2508:-180.747,0,-209.153	1/1:128:1,127:1:36:127:4522:-403.544,-34.9336,0	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	1/1:27:0,27:0:0:27:957:-86.443,-8.12781,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:15:0,15:0:0:15:536:-48.5739,-4.51545,0	1/1:13:0,13:0:0:13:456:-41.3723,-3.91339,0	0/1:122:66,56:66:2368:56:2000:-143.537,0,-176.65	1/1:199:0,199:0:0:199:7009:-630.844,-59.905,0	1/1:20:0,20:0:0:20:720:-65.1279,-6.0206,0	0/1:9:5,4:5:180:4:140:-10.2353,0,-13.8428	1/1:137:0,136:0:0:136:4834:-434.747,-40.9401,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:126:61,65:61:2180:65:2309:-170.138,0,-158.536	0/1:30:13,17:13:464:17:608:-46.0188,0,-33.0666	0/1:27:10,17:10:352:17:612:-47.2856,0,-23.8904	0/1:120:62,58:62:2220:58:2057:-149.254,0,-163.941	1/1:125:0,125:0:0:125:4432:-399.051,-37.6288,0	1/1:195:0,195:0:0:195:6882:-619.37,-58.7009,0	1/1:141:1,140:1:36:140:4917:-439.088,-38.847,0	0/1:111:58,53:58:2084:53:1869:-135.072,0,-154.416	0/1:187:114,73:114:4087:73:2583:-176.426,0,-311.674	1/1:14:0,14:0:0:14:488:-44.2494,-4.21442,0	1/1:162:0,162:0:0:162:5766:-519.046,-48.7669,0	0/1:72:41,31:41:1468:31:1108:-78.3462,0,-110.735	0/1:24:7,17:7:252:17:580:-45.297,0,-15.8042	0/1:94:52,42:52:1868:42:1479:-105.105,0,-140.102	1/1:79:0,79:0:0:79:2772:-249.717,-23.7814,0	0/1:19:5,14:5:180:14:500:-39.5144,0,-10.8325	0/1:24:10,14:10:360:14:496:-37.7495,0,-25.5196	1/1:78:0,78:0:0:78:2753:-247.941,-23.4803,0	1/1:80:2,78:2:72:78:2792:-244.682,-17.2457,0	0/1:11:4,7:4:144:7:248:-19.3529,0,-10.0023	1/1:172:0,172:0:0:172:6104:-549.321,-51.7772,0	1/1:152:0,152:0:0:152:5378:-484.151,-45.7566,0	1/1:72:0,72:0:0:72:2560:-230.649,-21.6742,0	1/1:73:0,73:0:0:73:2556:-230.289,-21.9752,0	1/1:163:0,163:0:0:163:5749:-517.523,-49.0679,0	1/1:146:6,140:6:212:140:4920:-423.517,-24.5256,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:64:0,64:0:0:64:2280:-205.46,-19.2659,0	1/1:60:0,60:0:0:60:2140:-192.825,-18.0618,0	0/1:24:17,7:17:608:7:248:-15.4395,0,-47.8273	1/1:144:0,144:0:0:144:5097:-458.867,-43.3483,0	0/1:64:33,31:33:1184:31:1100:-80.0425,0,-87.6024	0/1:155:60,95:60:2125:95:3374:-257.211,0,-144.7	0/1:141:84,57:84:3004:57:2025:-140.075,0,-228.146	1/1:112:0,112:0:0:112:3984:-358.679,-33.7154,0	1/1:54:0,54:0:0:54:1896:-170.776,-16.2556,0	0/1:20:14,6:14:504:6:212:-13.4042,0,-39.6775	1/1:83:0,83:0:0:83:2937:-264.559,-24.9855,0	1/1:100:0,100:0:0:100:3559:-320.509,-30.103,0	0/1:223:121,102:121:4313:102:3625:-259.318,0,-321.211	1/1:56:1,55:1:36:55:1944:-171.638,-13.2594,0	1/1:22:0,22:0:0:22:779:-70.4321,-6.62266,0	0/1:35:19,16:19:680:16:559:-40.1012,0,-50.9931	1/1:80:0,80:0:0:80:2864:-257.988,-24.0824,0	0/1:24:15,9:15:540:9:316:-21.5541,0,-41.7118	1/1:31:0,31:0:0:31:1100:-99.3081,-9.33193,0	0/1:47:20,26:20:702:26:924:-69.2703,0,-49.2957	1/1:11:0,11:0:0:11:396:-35.9818,-3.31133,0	0/1:50:30,20:30:1072:20:700:-48.272,0,-81.741	0/1:30:21,9:21:747:9:320:-20.1105,0,-58.5234	1/1:96:0,96:0:0:96:3436:-309.448,-28.8989,0	1/1:43:0,43:0:0:43:1538:-138.684,-12.9443,0
chr06	1124167	.	T	C	117385	PASS	AB=0.506829;ABP=7.10309;AC=46;AF=0.244681;AN=188;AO=5166;CIGAR=1X;DP=22132;DPB=22132;DPRA=1.31645;EPP=11220.8;EPPR=36789.9;GTI=1;LEN=1;MEANALT=1.01639;MQM=59.9772;MQMR=59.9877;NS=94;NUMALT=1;ODDS=3.67507;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=183771;QR=604589;RO=16965;RPL=2703;RPP=27.2218;RPPR=1036.11;RPR=2463;RUN=1;SAF=2703;SAP=27.2218;SAR=2463;SRF=9897;SRP=1027.4;SRR=7068;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:130:130,0:130:4633:0:0:0,-39.1339,-417.132	0/0:263:262,1:262:9293:1:36:0,-75.5726,-832.475	0/1:288:145,143:145:5123:143:5080:-370.648,0,-374.518	0/0:661:654,7:654:23252:7:252:0,-175.952,-2069.05	0/1:255:148,107:148:5255:107:3803:-265.701,0,-396.324	0/1:128:65,63:65:2328:63:2247:-163.961,0,-171.248	0/0:244:244,0:244:8625:0:0:0,-73.4513,-776.228	0/1:418:225,193:225:8037:193:6832:-489.125,0,-597.52	0/1:238:106,132:106:3793:132:4697:-351.246,0,-269.918	0/1:326:151,175:151:5395:175:6262:-465.535,0,-387.546	0/1:133:62,71:62:2192:71:2528:-187.732,0,-157.507	0/0:197:197,0:197:6991:0:0:0,-59.3029,-629.259	0/1:184:84,100:84:3000:100:3569:-266.027,0,-214.843	0/1:152:79,73:79:2782:73:2580:-186.69,0,-204.863	0/0:169:169,0:169:6036:0:0:0,-50.8741,-543.343	0/1:116:57,59:57:2024:59:2096:-153.988,0,-147.513	0/0:121:121,0:121:4290:0:0:0,-36.4246,-386.28	0/1:128:63,65:63:2225:65:2289:-167.739,0,-161.981	0/0:112:112,0:112:4004:0:0:0,-33.7154,-360.55	0/0:515:514,1:514:18339:1:36:0,-151.432,-1646.5	0/1:375:179,196:179:6402:196:6963:-513.845,0,-463.382	0/0:279:279,0:279:9965:0:0:0,-83.9874,-896.79	0/1:232:111,120:111:3951:120:4300:-317.279,0,-285.885	0/1:247:136,111:136:4818:111:3938:-280.257,0,-358.322	0/0:228:228,0:228:8163:0:0:0,-68.6348,-734.684	0/0:756:752,4:752:26821:4:144:0,-214.265,-2399.81	0/1:561:263,298:263:9392:298:10661:-790.521,0,-676.363	0/0:113:113,0:113:4016:0:0:0,-34.0164,-361.621	0/1:686:346,340:346:12372:340:12099:-882.255,0,-906.811	0/1:165:93,72:93:3324:72:2550:-180.079,0,-249.709	0/0:299:299,0:299:10626:0:0:0,-90.008,-956.259	0/1:8:2,6:2:72:6:212:-17.0166,0,-4.42848	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/1:9:1,8:1:36:8:284:-23.1941,0,-0.889005	0/1:15:13,2:13:468:2:72:-2.32127,0,-37.9442	0/1:506:230,276:230:8143:276:9815:-730.93,0,-580.571	0/0:257:257,0:257:9172:0:0:0,-77.3647,-825.454	0/0:104:104,0:104:3723:0:0:0,-31.3071,-335.271	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/0:399:397,2:397:14093:2:72:0,-113.274,-1261.31	0/0:58:58,0:58:2042:0:0:0,-17.4597,-184.049	0/1:466:220,246:220:7837:246:8771:-649.029,0,-565.079	0/1:214:115,99:115:4102:99:3503:-251.061,0,-304.945	0/1:191:94,97:94:3322:97:3446:-252.856,0,-241.701	0/1:272:148,124:148:5293:124:4421:-316.182,0,-394.624	0/0:322:322,0:322:11483:0:0:0,-96.9317,-1033.35	0/0:379:378,1:378:13501:1:36:0,-110.492,-1211.28	0/0:293:293,0:293:10468:0:0:0,-88.2018,-942.027	0/1:330:161,169:161:5760:169:5992:-440.046,0,-419.176	0/1:403:171,232:171:6104:232:8258:-621.917,0,-428.148	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:247:247,0:247:8826:0:0:0,-74.3544,-794.328	0/1:93:44,49:44:1565:49:1737:-128.617,0,-113.144	0/1:4:2,2:2:72:2:63:-4.77903,0,-5.6326	0/1:338:164,174:164:5834:174:6171:-453.742,0,-423.425	0/0:141:141,0:141:5000:0:0:0,-42.4452,-450.148	0/1:14:7,7:7:252:7:252:-18.8145,0,-18.8145	0/1:28:11,17:11:392:17:595:-45.4478,0,-27.1912	0/0:215:215,0:215:7682:0:0:0,-64.7214,-691.415	0/0:199:195,4:195:6975:4:144:0,-46.5913,-614.501	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:513:513,0:513:18276:0:0:0,-154.428,-1644.44	0/0:398:390,8:390:13883:8:288:0,-93.5425,-1222.98	0/0:196:196,0:196:6978:0:0:0,-59.0019,-628.086	0/0:198:197,1:197:7029:1:36:0,-56.0057,-629.075	0/0:419:413,6:413:14765:6:216:0,-106.343,-1308.67	0/0:302:301,1:301:10783:1:36:0,-87.3128,-966.774	0/0:70:70,0:70:2489:0:0:0,-21.0721,-224.262	0/0:144:144,0:144:5117:0:0:0,-43.3483,-460.675	0/0:163:163,0:163:5807:0:0:0,-49.0679,-522.747	0/1:55:33,22:33:1176:22:788:-54.6881,0,-89.5911	0/0:155:154,1:154:5504:1:36:0,-43.0614,-490.95	0/1:250:142,108:142:5047:108:3855:-271.889,0,-379.119	0/1:431:214,217:214:7668:217:7700:-563.293,0,-560.402	0/1:378:189,189:189:6730:189:6749:-493.695,0,-491.989	0/0:323:323,0:323:11480:0:0:0,-97.2327,-1033.08	0/0:266:261,5:261:9310:5:180:0,-63.5219,-821.31	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	0/0:289:288,1:288:10279:1:36:0,-83.3994,-921.439	0/0:301:301,0:301:10729:0:0:0,-90.61,-965.522	0/1:540:271,269:271:9663:269:9574:-699.061,0,-707.065	0/0:200:200,0:200:7126:0:0:0,-60.206,-641.401	0/0:144:144,0:144:5145:0:0:0,-43.3483,-463.146	0/1:223:119,104:119:4243:104:3672:-263.553,0,-314.921	0/0:383:381,2:381:13541:2:72:0,-108.458,-1211.65	0/1:105:48,57:48:1707:57:2020:-150.461,0,-122.307	0/0:202:202,0:202:7201:0:0:0,-60.8081,-648.147	0/1:189:87,102:87:3108:102:3616:-268.752,0,-223.053	0/0:71:71,0:71:2540:0:0:0,-21.3731,-228.851	0/1:169:86,83:86:3084:83:2949:-214.769,0,-226.914	0/1:204:77,127:77:2743:127:4530:-346.458,0,-185.702	0/0:239:239,0:239:8548:0:0:0,-71.9462,-769.317	0/0:317:317,0:317:11266:0:0:0,-95.4265,-1013.83
chr06	1135458	.	T	C	540453	PASS	AB=0.510096;ABP=23.2233;AC=143;AF=0.760638;AN=188;AO=26430;CIGAR=1X;DP=37658;DPB=37658;DPRA=0;EPP=56685;EPPR=23893.2;GTI=4;LEN=1;MEANALT=1.24468;MQM=59.6589;MQMR=59.4206;NS=94;NUMALT=1;ODDS=7.65656;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=939716;QR=400399;RO=11197;RPL=83;RPP=56676.4;RPPR=23893.2;RPR=26347;RUN=1;SAF=26429;SAP=57386.3;SAR=1;SRF=11197;SRP=24317;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:180:0,180:0:0:180:6400:-576.047,-54.1854,0	1/1:358:0,357:0:0:357:12723:-1144.32,-107.468,0	0/1:248:120,127:120:4292:127:4532:-333.195,0,-311.541	1/1:426:0,426:0:0:426:15151:-1363.06,-128.239,0	0/1:198:105,93:105:3754:93:3313:-238.587,0,-278.412	0/1:129:67,62:67:2404:62:2215:-160.765,0,-177.694	1/1:180:1,179:1:36:179:6372:-569.959,-50.5871,0	0/1:293:155,138:155:5520:138:4924:-354.987,0,-408.513	0/1:307:149,158:149:5276:158:5623:-413.685,0,-382.342	0/1:129:52,77:52:1859:77:2726:-206.655,0,-128.462	0/1:486:237,249:237:8496:249:8873:-652.145,0,-617.809	1/1:130:0,130:0:0:130:4620:-415.929,-39.1339,0	0/1:84:44,40:44:1576:40:1408:-101.721,0,-116.793	0/1:85:26,59:26:936:59:2086:-162.419,0,-58.8958	1/1:84:0,84:0:0:84:2999:-270.132,-25.2865,0	0/1:80:38,42:38:1364:42:1483:-109.679,0,-98.9531	1/1:40:0,40:0:0:40:1412:-127.374,-12.0412,0	0/1:32:13,19:13:468:19:684:-52.254,0,-32.8267	1/1:209:0,209:0:0:209:7437:-669.286,-62.9153,0	1/1:244:1,243:1:36:243:8659:-775.21,-69.853,0	0/1:337:174,163:174:6238:163:5777:-418.498,0,-459.941	1/1:291:0,291:0:0:291:10375:-933.53,-87.5997,0	0/1:321:171,150:171:6144:150:5386:-388.226,0,-454.471	0/1:130:62,68:62:2224:68:2423:-179.187,0,-161.264	1/1:169:0,169:0:0:169:5978:-537.961,-50.8741,0	1/1:457:0,457:0:0:457:16292:-1465.88,-137.571,0	0/1:364:160,204:160:5732:204:7213:-539.524,0,-406.315	1/1:35:0,35:0:0:35:1244:-112.257,-10.5361,0	0/1:517:229,286:229:8204:286:10163:-759.108,0,-582.888	0/1:554:279,275:279:9988:275:9770:-712.402,0,-731.956	1/1:201:6,195:6:212:195:6957:-606.718,-41.0822,0	0/1:1379:694,684:694:24779:684:24288:-1769.74,0,-1812.99	1/1:1569:3,1565:3:108:1565:55665:-4997.39,-462.298,0	0/1:1458:671,786:671:24023:786:27925:-2073.19,0,-1721.71	0/1:1987:822,1163:822:29369:1163:41322:-3118.74,0,-2042.73	1/1:1857:4,1850:4:144:1850:65778:-5901.67,-545.156,0	0/1:162:79,83:79:2828:83:2966:-218.305,0,-205.563	1/1:268:0,267:0:0:267:9472:-851.139,-80.375,0	1/1:363:0,363:0:0:363:12885:-1159.17,-109.274,0	0/1:764:357,407:357:12726:407:14434:-1068.61,0,-914.337	1/1:203:2,201:2:72:201:7153:-636.957,-54.2724,0	1/1:257:1,256:1:36:256:9060:-811.753,-73.7913,0	0/1:352:185,166:185:6613:166:5881:-423.362,0,-489.211	0/1:84:39,45:39:1400:45:1572:-116.48,0,-100.995	0/1:47:28,19:28:991:19:657:-45.3032,0,-75.3476	0/1:245:120,125:120:4279:125:4444:-326.37,0,-311.414	1/1:205:1,204:1:36:204:7220:-646.111,-58.1129,0	1/1:261:0,261:0:0:261:9298:-836.625,-78.5688,0	1/1:140:0,140:0:0:140:4940:-444.568,-42.1442,0	0/1:258:125,133:125:4483:133:4749:-349.898,0,-325.873	0/1:190:110,80:110:3934:80:2839:-198.547,0,-297.02	1/1:1704:2,1701:2:72:1701:60656:-5449.11,-506.177,0	1/1:198:1,197:1:36:197:7036:-629.628,-56.0057,0	0/1:138:69,69:69:2457:69:2451:-179.028,0,-179.72	0/1:901:450,451:450:16049:451:16033:-1170.87,0,-1172.38	0/1:221:121,100:121:4331:100:3531:-249.862,0,-322.419	1/1:118:0,118:0:0:118:4167:-375.202,-35.5215,0	0/1:1930:978,948:978:35028:948:33751:-2455.32,0,-2569.41	0/1:1677:846,828:846:30232:828:29461:-2145.65,0,-2211.77	1/1:209:0,208:0:0:208:7438:-669.095,-62.6142,0	1/1:98:0,98:0:0:98:3524:-317.349,-29.5009,0	0/1:1390:666,724:666:23827:724:25802:-1902.43,0,-1724.76	1/1:200:0,200:0:0:200:7115:-640.283,-60.206,0	1/1:263:3,260:3:108:260:9238:-820.861,-69.1139,0	1/1:141:1,140:1:36:140:4968:-443.73,-38.9091,0	1/1:187:0,187:0:0:187:6650:-598.302,-56.2926,0	1/1:302:2,300:2:72:300:10657:-952.064,-84.0743,0	1/1:278:0,278:0:0:278:9893:-890.004,-83.6863,0	1/1:650:0,650:0:0:650:23106:-2078.79,-195.67,0	1/1:127:0,127:0:0:127:4505:-405.499,-38.2308,0	1/1:44:0,44:0:0:44:1564:-141.051,-13.2453,0	0/1:1454:739,714:739:26400:714:25388:-1845.36,0,-1937.03	1/1:193:0,193:0:0:193:6823:-614.066,-58.0988,0	0/1:108:46,62:46:1652:62:2196:-165.245,0,-116.457	0/1:296:146,150:146:5224:150:5346:-392.16,0,-381.072	0/1:265:148,117:148:5305:117:4177:-295.909,0,-397.733	1/1:290:1,289:1:36:289:10285:-921.93,-83.7004,0	1/1:179:3,176:3:108:176:6231:-550.789,-43.8092,0	0/1:1631:880,750:880:31470:750:26615:-1903.25,0,-2338.31	1/1:176:0,175:0:0:175:6189:-556.607,-52.6803,0	1/1:175:0,175:0:0:175:6170:-554.778,-52.6803,0	0/1:354:188,164:188:6710:164:5832:-417.777,0,-497.321	1/1:68:0,68:0:0:68:2416:-217.692,-20.47,0	1/1:86:0,86:0:0:86:3056:-275.262,-25.8886,0	0/1:75:40,35:40:1428:35:1247:-89.9091,0,-106.174	1/1:186:0,186:0:0:186:6616:-595.355,-55.9916,0	0/1:26:16,10:16:576:10:360:-24.9141,0,-44.3257	1/1:78:0,78:0:0:78:2784:-250.776,-23.4803,0	0/1:68:34,34:34:1224:34:1216:-89.2698,0,-89.8849	1/1:621:0,619:0:0:619:21993:-1978.2,-186.338,0	0/1:984:435,548:435:15566:548:19420:-1450.87,0,-1103.87	0/1:93:52,41:52:1872:41:1458:-103.519,0,-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chr06	1135461	.	GTTTTTTAAC	GTTTTTAAAC,GTTTTTAAC	802463	PASS	AB=0.521267,0.469517;ABP=91.678,185.173;AC=143,45;AF=0.760638,0.239362;AN=188;AO=26706,10620;CIGAR=6M1X3M,1M1D8M;DP=37680;DPB=36605.5;DPRA=0,1.65987;EPP=56767.5,22571.6;EPPR=35.5824;GTI=3;LEN=1,1;MEANALT=4.44681,5.41071;MQM=59.7074,59.5345;MQMR=59.2667;NS=94;NUMALT=2;ODDS=2.70242;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=956061,376218;QR=472;RO=15;RPL=26565,10563;RPP=56776.1,22571.6;RPPR=35.5824;RPR=141,57;RUN=1,1;SAF=26705,10620;SAP=57985.7,23064;SAR=1,0;SRF=15;SRP=35.5824;SRR=0;TYPE=snp,del	GT:DP:AD:RO:QR:AO:QA:GL	1/1:185:0,184,0:0:0:184,0:6602,0:-593.89,-55.3895,0,-593.89,-55.3895,-593.89	1/1:368:0,364,0:0:0:364,0:13019,0:-1170.89,-109.575,0,-1170.89,-109.575,-1170.89	1/2:243:0,123,113:0:0:123,113:4404,4044:-688.848,-329.723,-292.696,-359.141,0,-325.125	1/1:435:0,431,0:0:0:431,0:15452,0:-1389.66,-129.744,0,-1389.66,-129.744,-1389.66	1/2:198:0,96,102:0:0:96,102:3456,3639:-578.764,-296.968,-268.069,-282.154,0,-251.449	1/2:128:1,63,63:1:30:63,63:2264,2237:-364.211,-179.832,-163.265,-182.309,0,-165.742	1/1:182:0,181,1:0:0:181,1:6466,36:-581.652,-54.4864,0,-578.714,-51.1892,-578.413	1/2:283:0,142,140:0:0:142,140:5084,4913:-814.267,-399.68,-356.934,-414.593,0,-372.449	1/2:304:0,160,143:0:0:160,143:5748,5000:-875.404,-406.691,-358.527,-468.862,0,-425.815	1/2:134:0,80,51:0:0:80,51:2837,1824:-379.653,-148.529,-124.446,-231.195,0,-215.843	1/2:485:1,255,223:1:29:255,223:9145,7896:-1386.01,-640.501,-566.046,-743.526,0,-678.705	1/1:130:0,128,0:0:0:128,0:4596,0:-413.442,-38.5318,0,-413.442,-38.5318,-413.442	1/2:79:0,40,38:0:0:40,38:1440,1356:-228.014,-110.521,-98.48,-117.539,0,-106.1	1/2:86:0,60,26:0:0:60,26:2160,920:-251.52,-75.274,-57.2122,-176.602,0,-168.775	1/1:84:0,84,0:0:0:84,0:3012,0:-271.301,-25.2865,0,-271.301,-25.2865,-271.301	1/2:80:0,41,38:0:0:41,38:1472,1349:-229.983,-109.909,-97.5669,-120.073,0,-108.634	1/1:40:0,40,0:0:0:40,0:1432,0:-129.173,-12.0412,0,-129.173,-12.0412,-129.173	1/2:34:0,21,13:0:0:21,13:756,464:-99.8684,-38.1841,-31.8625,-62.0422,0,-58.1288	1/1:210:0,209,0:0:0:209,0:7500,0:-674.442,-62.9153,0,-674.442,-62.9153,-674.442	1/1:247:0,243,1:0:0:243,1:8744,36:-786.61,-73.1503,0,-783.672,-70.2015,-783.371	1/2:330:0,167,161:0:0:167,161:5976,5716:-952.929,-465.762,-415.49,-487.256,0,-438.791	1/1:292:0,288,0:0:0:288,0:10301,0:-926.5,-86.6966,0,-926.5,-86.6966,-926.5	1/2:315:0,150,161:0:0:150,161:5361,5728:-903.945,-466.846,-421.691,-437.148,0,-388.682	1/2:127:0,69,58:0:0:69,58:2480,2068:-371.241,-168.923,-148.152,-202.676,0,-185.216	1/1:170:0,168,0:0:0:168,0:6016,0:-541.04,-50.573,0,-541.04,-50.573,-541.04	1/1:469:0,465,0:0:0:465,0:16613,0:-1494.48,-139.979,0,-1494.48,-139.979,-1494.48	1/2:357:0,206,151:0:0:206,151:7384,5371:-1040.03,-437.981,-375.968,-602.409,0,-556.953	1/1:36:0,34,0:0:0:34,0:1224,0:-110.123,-10.235,0,-110.123,-10.235,-110.123	1/2:509:0,285,217:0:0:285,217:10224,7725:-1462.87,-629.222,-543.428,-833.67,0,-768.347	1/2:548:0,264,272:0:0:264,272:9465,9611:-1554.28,-782.583,-703.111,-771.7,0,-689.82	1/1:210:0,203,6:0:0:203,6:7263,212:-653.054,-61.1091,0,-635.789,-43.7809,-633.983	1/2:1354:0,688,659:0:0:688,659:24549,23371:-3903.94,-1903.62,-1696.51,-2000.36,0,-1801.98	1/1:1596:1,1585,0:1:28:1585,0:56654,0:-5093.43,-474.917,0,-5093.73,-477.133,-5095.95	1/2:1457:1,810,634:1:36:810,634:29021,22415:-4188.36,-1822.14,-1581.25,-2363.61,0,-2175.69	1/2:1973:1,1173,777:1:34:1173,777:41978,27515:-5659.5,-2238.01,-1887.66,-3419.06,0,-3187.91	1/1:1897:1,1877,2:1:33:1877,2:67171,72:-6037.81,-562.365,0,-6032.23,-559.154,-6034.3	1/2:161:0,83,76:0:0:83,76:2980,2665:-459.622,-216.613,-191.627,-243.049,0,-220.171	1/1:276:0,274,0:0:0:274,0:9780,0:-878.6,-82.4822,0,-878.6,-82.4822,-878.6	1/1:368:1,363,0:1:33:363,0:13036,0:-1169.32,-106.606,0,-1169.62,-109.274,-1172.29	1/2:744:0,410,327:0:0:410,327:14717,11562:-2141.31,-941.374,-817.951,-1199.97,0,-1101.53	1/1:208:0,206,2:0:0:206,2:7344,72:-660.644,-62.0122,0,-654.769,-55.7775,-654.167	1/1:262:0,255,1:0:0:255,1:9164,36:-824.278,-76.7627,0,-821.363,-73.8467,-821.062	1/2:347:0,168,176:0:0:168,176:6013,6242:-998.568,-508.513,-457.94,-490.129,0,-437.148	1/2:86:0,46,39:0:0:46,39:1656,1400:-249.38,-114.26,-100.412,-135.197,0,-123.457	1/2:47:0,20,27:0:0:20,27:716,952:-136.258,-77.8672,-71.8466,-58.7467,0,-50.6189	1/2:248:1,125,121:1:27:125,121:4488,4256:-710.112,-344.312,-308.809,-364.069,0,-329.77	1/1:213:0,207,1:0:0:207,1:7362,32:-662.087,-62.3132,0,-659.509,-59.7321,-659.208	1/1:270:0,267,0:0:0:267,0:9540,0:-858.15,-80.375,0,-858.15,-80.375,-858.15	1/1:143:0,142,0:0:0:142,0:5072,0:-456.169,-42.7463,0,-456.169,-42.7463,-456.169	1/2:259:0,134,122:0:0:134,122:4789,4360:-746.015,-355.546,-315.208,-390.588,0,-353.862	1/2:189:0,79,109:0:0:79,109:2828,3885:-547.363,-316.746,-292.964,-230.723,0,-197.911	1/1:1728:1,1715,0:1:36:1715,0:61524,0:-5530.41,-513.327,0,-5530.71,-516.266,-5533.65	1/1:202:1,199,1:1:29:199,1:7156,36:-641.087,-57.6079,0,-638.45,-56.9443,-640.458	1/2:136:0,70,65:0:0:70,65:2485,2288:-388.559,-186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chr06	1135490	.	T	A	246738	PASS	AB=0.529331;ABP=187.587;AC=45;AF=0.239362;AN=188;AO=13112;CIGAR=1X;DP=39560;DPB=39560;DPRA=1.7134;EPP=28475.4;EPPR=57421.1;GTI=6;LEN=1;MEANALT=1.08065;MQM=53.8472;MQMR=59.7277;NS=94;NUMALT=1;ODDS=2.22259;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=460608;QR=942478;RO=26442;RPL=10998;RPP=13073.8;RPPR=57342.9;RPR=2114;RUN=1;SAF=10998;SAP=13073.8;SAR=2114;SRF=26433;SRP=57342.9;SRR=9;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:185:185,0:185:6581:0:0:0,-55.6905,-592.319	0/0:361:361,0:361:12886:0:0:0,-108.672,-1159.29	0/1:263:132,131:132:4665:131:4579:-332.644,0,-340.694	0/0:422:420,1:420:14939:1:36:0,-124.57,-1341.67	0/1:248:92,156:92:3295:156:5505:-364.309,0,-222.108	0/1:130:61,69:61:2179:69:2405:-177.475,0,-157.231	0/0:179:178,1:178:6379:1:36:0,-50.2861,-570.585	0/1:291:142,149:142:5051:149:5156:-375.22,0,-367.013	0/1:301:156,145:156:5557:145:5104:-368.687,0,-409.638	0/1:204:75,129:75:2684:129:4555:-271.087,0,-179.457	0/1:501:251,249:251:8911:249:8778:-626.751,0,-651.104	0/0:124:124,0:124:4373:0:0:0,-37.3277,-393.648	0/1:84:39,45:39:1395:45:1566:-115.85,0,-100.555	0/1:128:58,70:58:2071:70:2453:-139.131,0,-148.127	0/0:83:83,0:83:2971:0:0:0,-24.9855,-267.613	0/1:121:41,80:41:1463:80:2818:-176.786,0,-95.5376	0/0:38:38,0:38:1346:0:0:0,-11.4391,-121.434	0/1:32:19,13:19:676:13:455:-31.649,0,-51.5317	0/0:208:208,0:208:7460:0:0:0,-62.6142,-671.182	0/0:242:241,1:241:8601:1:36:0,-69.251,-770.468	0/1:464:160,304:160:5714:304:10749:-695.308,0,-374.594	0/0:282:282,0:282:10044:0:0:0,-84.8905,-903.848	0/1:402:150,251:150:5367:251:8850:-591.375,0,-362.077	0/1:247:68,179:68:2428:179:6339:-376.626,0,-144.415	0/0:165:165,0:165:5874:0:0:0,-49.6699,-528.661	0/0:461:459,2:459:16312:2:72:0,-133.013,-1461.91	0/1:534:194,340:194:6957:340:12007:-732.48,0,-465.353	0/0:35:35,0:35:1251:0:0:0,-10.536,-112.888	0/1:711:292,419:292:10430:419:14736:-906.646,0,-724.338	0/1:614:273,341:273:9738:341:12034:-834.518,0,-691.463	0/0:210:200,10:200:7145:10:356:0,-34.9532,-614.346	0/1:1364:682,682:682:24287:682:23739:-1721.77,0,-1774.33	0/0:1571:1571,0:1571:56014:0:0:0,-472.918,-5038.8	0/1:1463:795,668:795:28338:668:23436:-1667.1,0,-2108.86	0/1:1976:1159,817:1159:41258:817:28621:-1979.08,0,-3116.31	0/0:1863:1861,2:1861:66268:2:68:0,-554.361,-5953.09	0/1:263:80,183:80:2858:183:6500:-396.821,0,-178.275	0/0:270:270,0:270:9643:0:0:0,-81.2781,-867.587	0/0:360:360,0:360:12774:0:0:0,-108.371,-1149.41	0/1:751:404,347:404:14406:347:12205:-871.777,0,-1069.49	0/0:207:204,3:204:7276:3:108:0,-54.3499,-646.652	0/0:259:258,1:258:9201:1:36:0,-74.3933,-824.456	0/1:453:158,295:158:5659:295:10426:-688.23,0,-372.962	0/1:122:44,78:44:1567:78:2749:-171.541,0,-104.593	0/1:75:21,54:21:741:54:1873:-118.969,0,-44.4339	0/1:335:127,208:127:4527:208:7262:-469.099,0,-306.637	0/0:211:210,1:210:7430:1:27:0,-60.8175,-665.391	0/0:267:267,0:267:9566:0:0:0,-80.375,-860.717	0/0:143:143,0:143:5086:0:0:0,-43.0473,-457.811	0/1:309:137,172:137:4884:172:6067:-398.541,0,-346.583	0/1:252:78,174:78:2796:174:6160:-408.254,0,-176.016	0/0:1702:1702,0:1702:60856:0:0:0,-512.353,-5474.15	0/0:197:196,1:196:6967:1:32:0,-56.1036,-623.835	0/1:182:67,115:67:2400:115:4074:-264.695,0,-161.464	0/1:883:441,442:441:15716:442:15476:-1126.4,0,-1148.1	0/1:268:100,168:100:3592:168:5851:-377.956,0,-242.762	0/0:116:116,0:116:4121:0:0:0,-34.9195,-371.028	0/1:1903:944,959:944:33607:959:33786:-2462.18,0,-2448.75	0/1:1667:826,841:826:29485:841:29520:-2143.27,0,-2150.69	0/0:209:208,1:208:7447:1:36:0,-59.3187,-666.668	0/0:100:100,0:100:3569:0:0:0,-30.103,-321.394	0/1:1383:730,653:730:26113:653:22899:-1643.74,0,-1932.17	0/0:207:207,0:207:7392:0:0:0,-62.3132,-665.3	0/0:263:258,5:258:9157:5:180:0,-64.7185,-809.439	0/0:142:141,1:141:5052:1:32:0,-39.5728,-451.644	0/0:183:183,0:183:6513:0:0:0,-55.0885,-586.243	0/0:297:295,2:295:10490:2:72:0,-82.5692,-937.166	0/0:289:288,1:288:10264:1:36:0,-84.5308,-920.589	0/0:645:645,0:645:22869:0:0:0,-194.164,-2057.47	0/0:127:127,0:127:4517:0:0:0,-38.2308,-406.627	0/0:44:44,0:44:1567:0:0:0,-13.2453,-141.32	0/1:1448:716,730:716:25469:730:25695:-1872.82,0,-1854.86	0/0:190:190,0:190:6803:0:0:0,-57.1957,-612.062	0/1:103:61,42:61:2162:42:1479:-102.398,0,-163.423	0/1:399:145,254:145:5183:254:8971:-576.379,0,-346.485	0/1:356:119,237:119:4211:237:8321:-549.53,0,-272.003	0/0:290:290,0:290:10348:0:0:0,-87.2987,-931.178	0/0:179:176,3:176:6272:3:100:0,-44.5539,-555.231	0/1:1618:759,859:759:27098:859:30004:-2211.52,0,-1950.48	0/0:183:183,0:183:6537:0:0:0,-55.0885,-588.058	0/0:173:173,0:173:6185:0:0:0,-52.0782,-555.631	0/1:505:166,339:166:5915:339:11928:-769.855,0,-380.427	0/0:71:70,1:70:2508:1:36:0,-18.9062,-223.503	0/0:88:88,0:88:3143:0:0:0,-26.4906,-283.025	0/1:101:36,65:36:1292:65:2292:-151.235,0,-86.1321	0/0:185:185,0:185:6591:0:0:0,-55.6905,-592.754	0/1:26:10,16:10:360:16:568:-43.6026,0,-24.9141	0/0:81:81,0:81:2881:0:0:0,-24.3834,-259.515	0/1:69:34,35:34:1216:35:1196:-87.1022,0,-88.9675	0/0:623:623,0:623:22082:0:0:0,-187.542,-1986.62	0/1:1013:537,475:537:19082:475:16674:-1169.58,0,-1411.71	0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chr06	1459305	.	C	G	185504	PASS	AB=0.515289;ABP=14.1657;AC=139;AF=0.739362;AN=188;AO=8734;CIGAR=1X;DP=11429;DPB=11429;DPRA=30.7124;EPP=18786.7;EPPR=5809.54;GTI=1;LEN=1;MEANALT=1.13978;MQM=59.993;MQMR=59.9765;NS=94;NUMALT=1;ODDS=5.64133;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=311996;QR=95735;RO=2682;RPL=8714;RPP=18795.3;RPPR=5818.22;RPR=20;RUN=1;SAF=1;SAP=18960;SAR=8733;SRF=1;SRP=5818.22;SRR=2681;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:42:22,20:22:792:20:707:-51.312,0,-58.9624	1/1:240:0,240:0:0:240:8586:-772.735,-72.2472,0	0/1:137:54,83:54:1940:83:2972:-226.472,0,-133.635	1/1:277:0,277:0:0:277:9896:-890.584,-83.3853,0	0/1:159:72,87:72:2577:87:3112:-232.443,0,-184.314	0/1:73:40,33:40:1402:33:1172:-83.8117,0,-104.006	1/1:148:0,147:0:0:147:5272:-474.255,-44.2514,0	0/1:208:111,96:111:3949:96:3424:-245.701,0,-292.928	0/1:124:58,66:58:2050:66:2368:-176.05,0,-147.44	0/1:166:67,99:67:2408:99:3504:-265.589,0,-167.005	0/1:53:24,29:24:860:29:1026:-76.6967,0,-61.7672	1/1:86:0,86:0:0:86:3076:-277.069,-25.8886,0	0/1:121:47,73:47:1692:73:2611:-198.754,0,-116.083	0/1:68:37,31:37:1324:31:1116:-80.2817,0,-98.9921	1/1:88:0,88:0:0:88:3155:-284.174,-26.4906,0	0/1:59:38,21:38:1368:21:756:-50.6065,0,-105.66	1/1:67:0,67:0:0:67:2392:-215.537,-20.169,0	0/1:78:31,46:31:1116:46:1648:-125.069,0,-77.2126	1/1:42:0,42:0:0:42:1495:-134.844,-12.6433,0	1/1:220:0,220:0:0:220:7860:-707.428,-66.2266,0	0/1:183:86,97:86:3080:97:3451:-255.715,0,-222.34	1/1:214:0,214:0:0:214:7667:-690.064,-64.4204,0	0/1:140:70,70:70:2512:70:2503:-183.379,0,-184.188	0/1:149:75,74:75:2662:74:2633:-192.362,0,-194.97	1/1:127:0,127:0:0:127:4536:-408.408,-38.2308,0	1/1:302:0,301:0:0:301:10736:-965.79,-90.61,0	0/1:246:124,122:124:4441:122:4356:-318.161,0,-325.805	1/1:44:0,44:0:0:44:1580:-142.492,-13.2453,0	0/1:394:171,223:171:6094:223:7976:-599.258,0,-429.955	0/1:173:114,59:114:4084:59:2104:-137.551,0,-315.665	1/1:149:0,149:0:0:149:5332:-480.014,-44.8535,0	0/1:21:8,12:8:284:12:432:-32.8408,0,-19.5235	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	0/1:11:8,3:8:284:3:108:-6.76384,0,-22.592	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5581	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	0/1:263:155,107:155:5556:107:3818:-264.587,0,-420.934	1/1:206:0,206:0:0:206:7360:-662.45,-62.0122,0	1/1:56:0,56:0:0:56:1971:-177.66,-16.8577,0	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	1/1:177:2,175:2:72:175:6264:-557.016,-46.4456,0	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	0/1:189:93,96:93:3274:96:3440:-252.918,0,-237.983	0/1:122:68,54:68:2436:54:1936:-137.791,0,-182.77	0/1:89:47,42:47:1688:42:1504:-108.863,0,-125.415	0/1:210:83,127:83:2949:127:4549:-346.359,0,-202.427	0/1:192:68,124:68:2398:124:4404:-338.735,0,-158.277	1/1:288:1,285:1:36:285:10187:-913.162,-82.8561,0	1/1:193:0,192:0:0:192:6862:-617.29,-57.7978,0	0/1:147:67,80:67:2396:80:2854:-212.846,0,-171.646	0/1:140:63,76:63:2222:76:2715:-202.391,0,-158.039	0/1:15:8,7:8:288:7:244:-17.784,0,-21.752	1/1:121:0,121:0:0:121:4336:-390.415,-36.4246,0	0/1:61:44,17:44:1584:17:612:-37.0506,0,-124.489	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:121:68,53:68:2432:53:1877:-132.782,0,-182.711	1/1:54:0,54:0:0:54:1901:-171.366,-16.2556,0	0/1:17:13,4:13:464:4:144:-8.19611,0,-36.98	0/1:32:18,14:18:648:14:504:-36.0651,0,-49.0189	1/1:46:0,46:0:0:46:1647:-148.516,-13.8474,0	1/1:111:2,109:2:72:109:3888:-343.279,-26.5776,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	1/1:249:0,249:0:0:249:8891:-800.174,-74.9565,0	1/1:203:4,199:4:144:199:7093:-625.118,-47.7955,0	1/1:42:0,42:0:0:42:1500:-135.295,-12.6433,0	1/1:127:0,127:0:0:127:4524:-407.33,-38.2308,0	1/1:180:2,177:2:72:177:6336:-563.494,-47.4075,0	1/1:150:5,145:5:180:145:5173:-449.159,-28.6024,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:114:0,114:0:0:114:4056:-365.23,-34.3174,0	1/1:92:0,92:0:0:92:3276:-295.06,-27.6948,0	0/1:18:9,9:9:320:9:324:-24.0873,0,-23.7238	1/1:79:0,79:0:0:79:2832:-255.118,-23.7814,0	0/1:144:51,93:51:1820:93:3336:-257.109,0,-120.543	0/1:188:86,102:86:3031:102:3627:-270.043,0,-216.424	0/1:196:82,114:82:2932:114:4083:-308.654,0,-205.113	1/1:118:0,118:0:0:118:4210:-379.081,-35.5215,0	1/1:190:2,188:2:68:188:6703:-596.888,-50.738,0	0/1:30:18,12:18:644:12:428:-29.8279,0,-49.2597	1/1:174:3,171:3:108:171:6120:-540.825,-42.3041,0	1/1:173:0,173:0:0:173:6187:-556.928,-52.0782,0	0/1:287:136,151:136:4841:151:5391:-398.927,0,-349.45	1/1:104:0,104:0:0:104:3714:-334.458,-31.3071,0	1/1:63:0,63:0:0:63:2251:-202.853,-18.9649,0	0/1:111:50,61:50:1785:61:2184:-163.412,0,-127.516	1/1:158:1,157:1:36:157:5610:-501.424,-43.9645,0	0/1:59:23,36:23:820:36:1284:-98.0668,0,-56.3617	1/1:81:0,81:0:0:81:2908:-261.955,-24.3834,0	0/1:86:46,40:46:1656:40:1419:-102.118,0,-123.44	1/1:32:0,32:0:0:32:1144:-103.27,-9.63296,0	0/1:72:37,34:37:1328:34:1224:-88.7341,0,-98.0893	0/1:79:48,31:48:1724:31:1104:-75.8886,0,-131.664	1/1:152:0,152:0:0:152:5434:-489.189,-45.7566,0	1/1:118:0,118:0:0:118:4223:-380.25,-35.5215,0
chr06	1459314	.	G	C	44654.5	PASS	AB=0.483246;ABP=16.4714;AC=49;AF=0.260638;AN=188;AO=2699;CIGAR=1X;DP=11454;DPB=11454;DPRA=1.0945;EPP=5846.46;EPPR=18817;GTI=1;LEN=1;MEANALT=1.08475;MQM=59.9767;MQMR=59.9926;NS=94;NUMALT=1;ODDS=5.84248;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96442;QR=313242;RO=8740;RPL=2698;RPP=5855.13;RPPR=18825.7;RPR=1;RUN=1;SAF=1;SAP=5855.13;SAR=2698;SRF=1;SRP=18973;SRR=8739;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:18,22:18:648:22:792:-59.5645,0,-46.6107	0/0:239:238,0:238:8524:0:0:0,-71.6451,-766.799	0/1:139:82,57:82:2928:57:2044:-142.389,0,-221.912	0/0:278:277,0:277:9924:0:0:0,-83.3853,-892.739	0/1:159:89,70:89:3188:70:2512:-178.468,0,-239.28	0/1:76:35,41:35:1260:41:1464:-108.4,0,-90.8272	0/0:147:147,0:147:5280:0:0:0,-44.2514,-475.334	0/1:202:96,106:96:3444:106:3769:-278.602,0,-249.364	0/1:126:67,59:67:2396:59:2101:-151.428,0,-177.967	0/1:166:98,68:98:3512:68:2421:-168.174,0,-266.282	0/1:51:28,23:28:1008:23:828:-59.4916,0,-75.6838	0/0:86:86,0:86:3088:0:0:0,-25.8886,-278.147	0/1:123:73,50:73:2612:50:1790:-124.356,0,-198.301	0/1:68:32,36:32:1144:36:1292:-96.1137,0,-82.7995	0/0:87:87,0:87:3128:0:0:0,-26.1896,-281.745	0/1:60:22,38:22:788:38:1357:-104.368,0,-53.183	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.616	0/1:79:46,33:46:1648:33:1172:-82.0061,0,-124.827	0/0:40:39,0:39:1400:0:0:0,-11.7402,-125.939	0/0:219:217,0:217:7787:0:0:0,-65.3235,-700.497	0/1:182:97,84:97:3484:84:3012:-216.465,0,-258.924	0/0:214:214,0:214:7672:0:0:0,-64.4204,-690.514	0/1:142:69,73:69:2480:73:2593:-190.872,0,-180.707	0/1:151:75,76:75:2684:76:2683:-196.256,0,-196.348	0/0:128:128,0:128:4588:0:0:0,-38.5318,-413.084	0/0:301:300,0:300:10728:0:0:0,-90.309,-965.069	0/1:248:123,125:123:4396:125:4473:-328.082,0,-321.158	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/1:395:224,170:224:8036:170:6089:-429.144,0,-604.292	0/1:172:58,114:58:2072:114:4073:-314.976,0,-134.974	0/0:152:151,0:151:5412:0:0:0,-45.4555,-486.85	0/1:21:13,8:13:468:8:288:-19.9458,0,-36.138	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:11:3,8:3:104:8:288:-22.9561,0,-6.39148	0/1:8:1,7:1:32:7:252:-20.6207,0,-0.791073	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:258:108,150:108:3880:150:5384:-407.023,0,-271.728	0/0:206:206,0:206:7404:0:0:0,-62.0122,-666.402	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.985	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	0/0:177:173,2:173:6184:2:72:0,-46.2034,-549.822	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/1:195:99,96:99:3544:96:3436:-250.753,0,-260.468	0/1:125:56,69:56:2008:69:2484:-186.184,0,-143.365	0/1:90:43,47:43:1544:47:1688:-125.114,0,-112.16	0/1:211:128,83:128:4600:83:2972:-204.195,0,-350.645	0/1:197:126,71:126:4508:71:2536:-169.189,0,-346.586	0/0:289:287,2:287:10312:2:72:0,-80.1609,-921.159	0/0:193:193,0:193:6924:0:0:0,-58.0988,-623.225	0/1:151:84,67:84:3012:67:2404:-171.161,0,-225.855	0/1:142:77,65:77:2748:65:2303:-164.784,0,-204.817	0/1:15:7,8:7:237:8:288:-21.752,0,-17.1436	0/0:121:120,0:120:4304:0:0:0,-36.1236,-387.176	0/1:62:17,45:17:608:45:1612:-126.706,0,-36.3882	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:122:52,70:52:1864:70:2490:-187.624,0,-131.314	0/0:53:53,0:53:1881:0:0:0,-15.9546,-169.567	0/1:17:4,13:4:144:13:464:-36.98,0,-8.19611	0/1:32:14,18:14:500:18:648:-49.0189,0,-35.7032	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.13	0/0:112:109,3:109:3920:3:108:0,-23.6402,-342.916	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:248:248,0:248:8896:0:0:0,-74.6554,-800.62	0/0:204:199,4:199:7128:4:144:0,-48.1553,-628.264	0/0:43:43,0:43:1525:0:0:0,-12.9443,-137.541	0/0:128:128,0:128:4580:0:0:0,-38.5318,-412.365	0/0:180:178,2:178:6392:2:68:0,-47.7277,-568.909	0/0:153:148,5:148:5292:5:180:0,-29.5055,-459.864	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:113:113,0:113:4052:0:0:0,-34.0164,-364.867	0/0:92:92,0:92:3296:0:0:0,-27.6948,-296.859	0/1:17:9,8:9:320:8:284:-20.7858,0,-24.0248	0/0:78:78,0:78:2784:0:0:0,-23.4803,-250.801	0/1:142:93,49:93:3324:49:1760:-115.748,0,-256.632	0/1:189:101,86:101:3616:86:3039:-217.104,0,-269.013	0/1:196:114,82:114:4080:82:2914:-203.491,0,-308.384	0/0:117:116,1:116:4156:1:36:0,-31.6222,-370.624	0/0:187:185,2:185:6648:2:72:0,-49.4559,-591.558	0/1:30:12,18:12:432:18:648:-49.621,0,-30.1903	0/0:175:172,3:172:6176:3:108:0,-42.6051,-545.86	0/0:173:173,0:173:6188:0:0:0,-52.0782,-557.018	0/1:289:152,137:152:5444:137:4886:-352.893,0,-403.091	0/0:104:104,0:104:3732:0:0:0,-31.3071,-336.078	0/0:63:63,0:63:2252:0:0:0,-18.9649,-202.943	0/1:110:59,51:59:2108:51:1828:-131.688,0,-156.876	0/0:157:155,2:155:5560:2:72:0,-40.425,-493.686	0/1:58:35,23:35:1252:23:828:-57.3844,0,-95.5253	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.955	0/1:87:40,47:40:1432:47:1680:-125.298,0,-102.988	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/1:74:36,38:36:1292:38:1360:-100.424,0,-94.3075	0/1:81:32,49:32:1152:49:1756:-133.941,0,-79.6067	0/0:152:151,1:151:5428:1:21:0,-43.6566,-486.547	0/0:120:120,0:120:4292:0:0:0,-36.1236,-386.372
chr06	1478550	.	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chr06	1630779	.	AGCGT	AGCGG	341094	PASS	AB=0.492499;ABP=5.68154;AC=147;AF=0.781915;AN=188;AO=15647;CIGAR=4M1X;DP=18604;DPB=18624.8;DPRA=0;EPP=33980;EPPR=6080.96;GTI=2;LEN=1;MEANALT=1.74468;MQM=59.506;MQMR=59.9943;NS=94;NUMALT=1;ODDS=2.93841;PAIRED=0;PAIREDR=0;PAO=52;PQA=1394;PQR=0;PRO=0;QA=558319;QR=98702;RO=2799;RPL=0;RPP=33980;RPPR=6080.96;RPR=15647;RUN=1;SAF=15647;SAP=33980;SAR=0;SRF=2799;SRP=6080.96;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:43,19:43:1522:19:665:-41.5007,0,-118.61	1/1:211:2,209:2:72:209:7469:-665.037,-56.6806,0	0/1:159:77,79:77:2715:79:2832:-207.735,0,-197.275	1/1:248:0,239:0:0:239:8557:-769.73,-71.9462,0	0/1:123:62,61:62:2188:61:2169:-158.434,0,-160.16	0/1:36:26,9:26:912:9:324:-18.61,0,-71.4992	1/1:172:0,171:0:0:171:6108:-549.337,-51.4761,0	0/1:228:112,113:112:3923:113:4026:-294.325,0,-285.178	0/1:150:82,68:82:2906:68:2440:-174.211,0,-216.444	0/1:170:98,72:98:3440:72:2569:-180.182,0,-258.642	0/1:89:52,36:52:1851:36:1288:-89.3708,0,-140.02	1/1:83:0,78:0:0:78:2776:-249.534,-23.4803,0	0/1:93:47,43:47:1644:43:1536:-111.021,0,-120.794	0/1:71:39,32:39:1377:32:1133:-80.9012,0,-102.855	1/1:58:0,55:0:0:55:1976:-177.679,-16.5567,0	0/1:65:34,31:34:1202:31:1108:-80.4548,0,-88.9192	1/1:60:0,59:0:0:59:2124:-191.052,-17.7608,0	0/1:82:41,41:41:1443:41:1461:-107.091,0,-105.48	1/1:173:0,168:0:0:168:6004:-539.863,-50.573,0	1/1:277:3,273:3:107:273:9785:-870.395,-73.5062,0	0/1:195:103,92:103:3635:92:3296:-238.138,0,-268.658	1/1:110:0,109:0:0:109:3885:-348.633,-32.8123,0	0/1:94:50,44:50:1763:44:1561:-112.333,0,-130.597	0/1:186:96,87:96:3383:87:3105:-224.242,0,-249.272	1/1:105:1,104:1:36:104:3732:-332.45,-28.0099,0	1/1:421:2,419:2:61:419:14982:-1340.68,-121.031,0	0/1:337:152,185:152:5383:185:6587:-491.04,0,-383.04	1/1:33:0,33:0:0:33:1188:-107.008,-9.93399,0	0/1:453:273,179:273:9660:179:6387:-438.421,0,-732.941	0/1:196:106,86:106:3751:86:3069:-218.224,0,-279.64	1/1:127:1,126:1:36:126:4497:-401.258,-34.6325,0	1/1:610:3,606:3:108:606:21610:-1933.61,-173.792,0	1/1:341:1,337:1:36:337:12026:-1078.3,-98.5097,0	1/1:889:6,880:6:215:880:31413:-2805.44,-247.413,0	1/1:945:9,930:9:311:930:33144:-2951.01,-254.74,0	1/1:1443:1,1439:1:36:1439:51267:-4605.38,-430.275,0	0/1:174:93,76:93:3298:76:2720:-193.771,0,-245.83	1/1:176:0,173:0:0:173:6182:-555.971,-52.0782,0	1/1:467:0,464:0:0:464:16554:-1486.87,-139.678,0	0/1:15:9,6:9:315:6:210:-14.7251,0,-24.1718	1/1:154:0,154:0:0:154:5505:-495.42,-46.3586,0	1/1:159:0,156:0:0:156:5581:-502.044,-46.9607,0	0/1:183:91,92:91:3210:92:3273:-239.573,0,-233.917	0/1:77:41,32:41:1456:32:1140:-80.557,0,-108.988	0/1:62:26,36:26:904:36:1280:-96.8361,0,-63.0092	0/1:158:80,78:80:2787:78:2784:-203.11,0,-203.39	0/1:176:79,96:79:2780:96:3455:-258.088,0,-197.401	1/1:248:0,243:0:0:243:8662:-778.992,-73.1503,0	1/1:170:0,168:0:0:168:5990:-538.426,-50.573,0	0/1:205:99,104:99:3524:104:3717:-273.25,0,-255.903	0/1:191:77,114:77:2723:114:4088:-310.53,0,-187.758	1/1:682:8,664:8:282:664:23699:-2104.93,-176.934,0	1/1:175:0,175:0:0:175:6268:-564.032,-52.6803,0	0/1:45:24,20:24:829:20:716:-51.0753,0,-61.3195	0/1:32:12,20:12:423:20:720:-55.482,0,-28.7729	0/1:142:77,65:77:2711:65:2332:-167.358,0,-201.487	1/1:62:0,62:0:0:62:2205:-198.64,-18.6639,0	0/1:16:5,11:5:180:11:392:-30.8036,0,-11.7356	0/1:21:6,10:6:208:10:360:-27.5707,0,-13.891	1/1:59:0,59:0:0:59:2093:-188.624,-17.7608,0	1/1:78:2,76:2:72:76:2711:-237.339,-16.6436,0	0/1:30:14,16:14:499:16:576:-43.1394,0,-36.2151	1/1:79:0,79:0:0:79:2825:-254.477,-23.7814,0	1/1:254:2,252:2:72:252:8962:-798.926,-69.6249,0	1/1:126:0,124:0:0:124:4380:-393.983,-37.3277,0	1/1:149:0,149:0:0:149:5322:-478.846,-44.8535,0	1/1:215:5,205:5:170:205:7273:-638.938,-47.9321,0	1/1:121:3,118:3:105:118:4191:-367.483,-26.6688,0	1/1:181:0,179:0:0:179:6400:-575.551,-53.8844,0	1/1:116:0,115:0:0:115:4094:-368.014,-34.6185,0	1/1:79:0,77:0:0:77:2756:-247.933,-23.1793,0	1/1:415:15,393:15:530:393:13956:-1206.9,-75.147,0	1/1:75:0,73:0:0:73:2605:-234.148,-21.9752,0	0/1:90:34,54:34:1207:54:1944:-148.317,0,-82.0572	0/1:217:130,87:130:4562:87:3074:-211.555,0,-345.429	0/1:241:115,126:115:4069:126:4520:-334.411,0,-293.853	1/1:159:0,159:0:0:159:5636:-507.12,-47.8638,0	1/1:153:2,150:2:71:150:5353:-475.089,-39.3727,0	1/1:594:9,583:9:316:583:20844:-1845.36,-149.961,0	1/1:165:0,164:0:0:164:5846:-525.769,-49.3689,0	1/1:181:0,179:0:0:179:6387:-573.951,-53.8844,0	1/1:351:0,349:0:0:349:12436:-1118.25,-105.059,0	1/1:74:0,74:0:0:74:2654:-239.093,-22.2762,0	1/1:79:0,77:0:0:77:2772:-249.363,-23.1793,0	0/1:75:44,29:44:1565:29:1040:-71.5466,0,-118.778	1/1:127:0,127:0:0:127:4545:-409.117,-38.2308,0	0/1:44:26,18:26:910:18:640:-44.6807,0,-68.9689	1/1:76:0,76:0:0:76:2720:-245.019,-22.8783,0	0/1:58:34,24:34:1201:24:852:-59.5221,0,-90.9355	1/1:435:0,427:0:0:427:15247:-1371.25,-128.54,0	0/1:354:61,285:61:2128:285:10124:-806.359,0,-87.2702	0/1:71:54,16:54:1879:16:576:-30.7431,0,-147.954	1/1:109:0,109:0:0:109:3893:-349.671,-32.8123,0	1/1:89:0,88:0:0:88:3140:-282.377,-26.4906,0
chr06	1630804	.	T	C	351261	PASS	AB=0.50448;ABP=3.96362;AC=147;AF=0.781915;AN=188;AO=16019;CIGAR=1X;DP=18824;DPB=18824;DPRA=0;EPP=34701;EPPR=5985.73;GTI=2;LEN=1;MEANALT=1.09574;MQM=59.4832;MQMR=59.9875;NS=94;NUMALT=1;ODDS=2.88267;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=573152;QR=100008;RO=2795;RPL=10;RPP=34701;RPPR=5985.73;RPR=16009;RUN=1;SAF=16019;SAP=34787.8;SAR=0;SRF=2795;SRP=6072.28;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:43,19:43:1525:19:680:-42.6397,0,-118.664	1/1:211:3,208:3:108:208:7429:-658.201,-53.4422,0	0/1:159:76,83:76:2705:83:2961:-217.993,0,-195.829	1/1:253:0,253:0:0:253:9021:-811.826,-76.1606,0	0/1:120:58,62:58:2065:62:2213:-163.277,0,-149.996	0/1:38:27,11:27:972:11:396:-24.5436,0,-76.3588	1/1:178:0,178:0:0:178:6349:-571.377,-53.5833,0	0/1:226:112,114:112:4008:114:4092:-300.314,0,-292.877	0/1:152:81,71:81:2916:71:2556:-184.207,0,-216.918	0/1:171:97,74:97:3461:74:2632:-185.47,0,-260.225	0/1:90:52,38:52:1872:38:1356:-95.2454,0,-141.666	1/1:85:0,85:0:0:85:3049:-274.604,-25.5876,0	0/1:92:48,44:48:1720:44:1584:-115.097,0,-127.391	0/1:70:37,33:37:1320:33:1184:-85.7861,0,-98.0298	1/1:59:0,59:0:0:59:2124:-191.328,-17.7608,0	0/1:64:31,33:31:1116:33:1180:-87.2329,0,-81.4858	1/1:60:1,59:1:36:59:2120:-187.422,-14.4635,0	0/1:84:40,44:40:1440:44:1576:-116.837,0,-104.611	1/1:176:1,175:1:36:175:6268:-560.363,-49.383,0	1/1:280:3,277:3:108:277:9924:-882.965,-74.2132,0	0/1:195:102,93:102:3660:93:3340:-242.096,0,-270.902	1/1:112:0,112:0:0:112:3998:-359.235,-33.7154,0	0/1:97:51,46:51:1828:46:1647:-119.227,0,-135.601	0/1:185:97,88:97:3473:88:3160:-228.915,0,-257.061	1/1:111:1,109:1:36:109:3890:-346.733,-29.7949,0	1/1:425:1,423:1:36:423:15137:-1357.51,-124.398,0	0/1:334:149,184:149:5329:184:6578:-491.021,0,-379.14	1/1:34:1,33:1:36:33:1184:-103.099,-6.63719,0	0/1:451:271,180:271:9643:180:6439:-443.793,0,-732.058	0/1:194:106,88:106:3774:88:3155:-225.714,0,-281.457	1/1:131:1,130:1:36:130:4644:-414.475,-35.8367,0	1/1:618:3,613:3:108:613:21950:-1964.13,-175.719,0	1/1:346:1,345:1:36:345:12345:-1106.89,-100.558,0	1/1:897:6,890:6:216:890:31847:-2844.18,-250.164,0	1/1:970:8,962:8:288:962:34419:-3067.17,-265.732,0	1/1:1458:2,1455:2:72:1455:52092:-4677.52,-432.024,0	0/1:175:95,80:95:3416:80:2858:-204.749,0,-254.966	1/1:178:1,177:1:36:177:6344:-567.229,-49.9851,0	1/1:474:0,474:0:0:474:16959:-1523.25,-142.688,0	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	1/1:153:0,153:0:0:153:5479:-492.344,-46.0576,0	1/1:162:0,162:0:0:162:5816:-523.524,-48.7669,0	0/1:181:89,92:89:3188:92:3308:-243.436,0,-232.657	0/1:78:44,34:44:1580:34:1212:-85.8928,0,-119.011	0/1:61:25,36:25:896:36:1296:-98.5779,0,-62.5975	0/1:160:79,81:79:2832:81:2892:-212.342,0,-206.954	0/1:179:78,101:78:2788:101:3614:-271.501,0,-197.276	1/1:250:0,250:0:0:250:8901:-800.776,-75.2575,0	1/1:171:0,171:0:0:171:6119:-550.515,-51.4761,0	0/1:205:97,108:97:3473:108:3867:-286.502,0,-251.066	0/1:195:78,117:78:2770:117:4194:-318.864,0,-190.838	1/1:702:8,694:8:284:694:24806:-2205.12,-185.42,0	1/1:180:0,180:0:0:180:6443:-579.905,-54.1854,0	0/1:45:25,20:25:900:20:716:-51.134,0,-67.7747	0/1:34:13,21:13:453:21:743:-56.9445,0,-30.8646	0/1:141:77,64:77:2764:64:2295:-164.33,0,-206.551	1/1:64:0,64:0:0:64:2292:-206.464,-19.2659,0	0/1:16:5,11:5:180:11:392:-30.8036,0,-11.7356	0/1:21:6,15:6:212:15:539:-42.5219,0,-13.1032	1/1:60:0,60:0:0:60:2143:-193.123,-18.0618,0	1/1:78:2,76:2:72:76:2736:-239.141,-16.6436,0	0/1:30:14,16:14:500:16:576:-43.1394,0,-36.3053	1/1:81:0,81:0:0:81:2908:-261.945,-24.3834,0	1/1:254:2,251:2:72:251:8962:-799.155,-69.6837,0	1/1:125:0,125:0:0:125:4473:-402.706,-37.6288,0	1/1:150:2,148:2:72:148:5296:-469.803,-38.3178,0	1/1:220:5,215:5:180:215:7688:-675.356,-49.6745,0	1/1:121:3,118:3:104:118:4205:-368.796,-26.7218,0	1/1:187:1,186:1:36:186:6667:-596.427,-52.6943,0	1/1:116:0,116:0:0:116:4150:-373.601,-34.9195,0	1/1:81:0,81:0:0:81:2895:-260.783,-24.3834,0	1/1:427:15,412:15:536:412:14701:-1272.71,-79.965,0	1/1:76:0,76:0:0:76:2709:-244.028,-22.8783,0	0/1:90:32,58:32:1148:58:2042:-156.916,0,-76.5371	0/1:215:128,86:128:4600:86:3075:-212.284,0,-349.531	0/1:241:117,124:117:4189:124:4443:-327.448,0,-304.641	1/1:165:0,165:0:0:165:5883:-529.481,-49.67,0	1/1:153:2,151:2:72:151:5402:-479.194,-39.2209,0	1/1:612:10,602:10:360:602:21542:-1904.34,-151.486,0	1/1:167:0,167:0:0:167:5987:-538.868,-50.272,0	1/1:185:1,184:1:36:184:6583:-588.353,-52.0923,0	1/1:352:0,352:0:0:352:12588:-1132.32,-105.963,0	1/1:75:2,73:2:72:73:2624:-229.556,-15.7405,0	1/1:79:0,79:0:0:79:2836:-255.476,-23.7814,0	0/1:75:46,29:46:1648:29:1044:-71.6929,0,-126.031	1/1:129:0,129:0:0:129:4614:-415.322,-38.8329,0	0/1:45:26,19:26:936:19:680:-47.9746,0,-71.0131	1/1:76:2,74:2:72:74:2651:-231.974,-16.0416,0	0/1:58:34,24:34:1220:24:856:-59.8564,0,-92.6471	1/1:443:0,443:0:0:443:15870:-1427.54,-133.356,0	0/1:356:60,296:60:2145:296:10586:-845.262,0,-86.149	0/1:69:52,17:52:1863:17:612:-34.6424,0,-147.175	1/1:112:0,112:0:0:112:4016:-361.563,-33.7154,0	1/1:93:0,93:0:0:93:3325:-299.438,-27.9958,0
chr06	1630810	.	G	A	331950	PASS	AB=0.496748;ABP=3.50464;AC=147;AF=0.781915;AN=188;AO=15329;CIGAR=1X;DP=18129;DPB=18129;DPRA=0;EPP=31591.9;EPPR=5738.25;GTI=2;LEN=1;MEANALT=1.05319;MQM=59.4964;MQMR=59.9864;NS=94;NUMALT=1;ODDS=6.67871;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=534809;QR=99879;RO=2795;RPL=198;RPP=31591.9;RPPR=5738.25;RPR=15131;RUN=1;SAF=15329;SAP=33289.5;SAR=0;SRF=2795;SRP=6072.28;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:43,19:43:1529:19:676:-42.4959,0,-119.237	1/1:198:2,196:2:72:196:6721:-597.789,-52.7672,0	0/1:160:79,81:79:2804:81:2861:-208.685,0,-204.434	1/1:244:0,244:0:0:244:8579:-772.091,-73.4513,0	0/1:117:60,57:60:2143:57:1987:-143.777,0,-157.917	0/1:38:27,11:27:972:11:373:-22.4561,0,-76.3588	1/1:172:0,172:0:0:172:6024:-542.212,-51.7772,0	0/1:223:112,111:112:3992:111:3862:-280.531,0,-292.339	0/1:149:79,70:79:2840:70:2487:-178.923,0,-210.984	0/1:166:97,69:97:3461:69:2434:-169.241,0,-261.73	0/1:89:54,35:54:1936:35:1252:-86.1911,0,-147.725	1/1:81:0,81:0:0:81:2858:-257.456,-24.3834,0	0/1:92:49,43:49:1747:43:1499:-107.443,0,-129.819	0/1:68:38,30:38:1364:30:1065:-75.6895,0,-102.591	1/1:58:0,58:0:0:58:2053:-184.95,-17.4597,0	0/1:65:33,32:33:1180:32:1122:-81.7076,0,-86.9411	1/1:57:0,57:0:0:57:1931:-174.038,-17.1587,0	0/1:83:41,42:41:1457:42:1395:-100.836,0,-106.438	1/1:159:3,156:3:108:156:5347:-471.043,-37.7886,0	1/1:274:3,271:3:108:271:9627:-856.113,-72.4071,0	0/1:196:104,92:104:3693:92:3192:-228.473,0,-273.571	1/1:100:0,99:0:0:99:3520:-316.03,-29.802,0	0/1:95:50,45:50:1792:45:1529:-109.202,0,-132.965	0/1:180:93,87:93:3344:87:3004:-216.385,0,-246.962	1/1:101:1,100:1:36:100:3493:-310.938,-26.8058,0	1/1:400:1,399:1:36:399:13909:-1246.95,-116.814,0	0/1:331:148,183:148:5290:183:6368:-473.096,0,-376.591	1/1:33:1,32:1:21:32:1129:-99.5956,-7.83406,0	0/1:444:269,175:269:9612:175:6140:-419.011,0,-731.375	0/1:189:106,83:106:3793:83:2869:-201.547,0,-284.672	1/1:127:1,126:1:36:126:4468:-398.641,-34.6325,0	1/1:582:5,577:5:180:577:19598:-1746.24,-158.647,0	1/1:333:0,333:0:0:333:11574:-1041.39,-100.243,0	1/1:870:7,862:7:252:862:30316:-2703.59,-238.926,0	1/1:924:8,915:8:288:915:31742:-2828.1,-251.943,0	1/1:1409:1,1408:1:36:1408:48985:-4401,-420.553,0	0/1:174:96,78:96:3409:78:2771:-197.19,0,-254.637	1/1:170:0,170:0:0:170:5946:-535.021,-51.1751,0	1/1:442:0,441:0:0:441:15244:-1368.66,-132.754,0	0/1:15:9,6:9:324:6:201:-13.8969,0,-24.9904	1/1:152:0,152:0:0:152:5391:-484.975,-45.7566,0	1/1:152:0,152:0:0:152:5385:-484.752,-45.7566,0	0/1:175:89,86:89:3196:86:2915:-209.889,0,-235.182	0/1:79:45,34:45:1612:34:1209:-85.3196,0,-121.589	0/1:58:23,35:23:828:35:1237:-94.1693,0,-57.3844	0/1:154:77,77:77:2760:77:2673:-194.444,0,-202.283	0/1:175:77,98:77:2748:98:3456:-258.498,0,-194.88	1/1:236:1,235:1:36:235:8210:-735.268,-67.4448,0	1/1:166:0,166:0:0:166:5907:-531.713,-49.971,0	0/1:205:99,106:99:3535:106:3762:-277.056,0,-256.646	0/1:191:78,113:78:2781:113:4011:-303.606,0,-193.033	1/1:675:9,665:9:324:665:23312:-2066.98,-173.748,0	1/1:172:1,171:1:36:171:5977:-534.406,-48.1789,0	0/1:46:26,20:26:936:20:697:-49.1159,0,-70.7121	0/1:33:13,20:13:464:20:682:-51.7551,0,-32.1635	0/1:140:77,63:77:2729:63:2211:-157.075,0,-203.706	1/1:58:0,58:0:0:58:2050:-184.749,-17.4597,0	0/1:16:5,11:5:180:11:377:-29.4415,0,-11.7356	0/1:20:6,14:6:216:14:481:-37.5945,0,-13.7699	1/1:58:0,58:0:0:58:2027:-182.684,-17.4597,0	1/1:77:2,75:2:72:75:2669:-233.115,-16.3426,0	0/1:29:14,15:14:504:15:536:-39.8402,0,-36.9682	1/1:73:0,73:0:0:73:2541:-228.933,-21.9752,0	1/1:250:2,248:2:72:248:8691:-774.422,-68.4208,0	1/1:122:0,122:0:0:122:4198:-377.975,-36.7257,0	1/1:147:2,145:2:72:145:5113:-453.329,-37.4147,0	1/1:204:4,200:4:144:200:6926:-610.061,-48.0965,0	1/1:117:3,114:3:108:114:3895:-340.609,-25.1453,0	1/1:174:0,174:0:0:174:6068:-546.175,-52.3792,0	1/1:112:0,112:0:0:112:3997:-359.65,-33.7154,0	1/1:78:0,78:0:0:78:2767:-249.268,-23.4803,0	1/1:415:15,400:15:540:400:13893:-1200.22,-75.9909,0	1/1:75:0,75:0:0:75:2621:-235.976,-22.5773,0	0/1:86:33,53:33:1184:53:1806:-136.893,0,-80.9797	0/1:215:128,87:128:4569:87:3048:-209.687,0,-346.654	0/1:238:115,123:115:4120:123:4287:-314.353,0,-299.339	1/1:157:0,157:0:0:157:5314:-478.3,-47.2617,0	1/1:141:2,139:2:68:139:4908:-435.332,-35.9875,0	1/1:572:9,563:9:324:563:19148:-1692.59,-142.683,0	1/1:160:0,160:0:0:160:5616:-505.508,-48.1648,0	1/1:173:1,172:1:36:172:5930:-530.097,-48.4799,0	1/1:338:1,337:1:36:337:11928:-1069.63,-98.1499,0	1/1:69:1,68:1:36:68:2421:-214.535,-17.1728,0	1/1:76:0,76:0:0:76:2708:-243.964,-22.8783,0	0/1:74:46,28:46:1656:28:993:-67.4016,0,-127.052	1/1:121:0,121:0:0:121:4204:-378.523,-36.4246,0	0/1:42:26,16:26:936:16:557:-37.8123,0,-71.9162	1/1:70:0,70:0:0:70:2391:-215.423,-21.0721,0	0/1:55:34,21:34:1216:21:737:-50.094,0,-93.1899	1/1:428:0,428:0:0:428:15183:-1365.75,-128.841,0	0/1:349:60,289:60:2147:289:10213:-813.824,0,-88.434	0/1:65:50,15:50:1767:15:525:-28.0111,0,-139.743	1/1:105:0,105:0:0:105:3685:-331.195,-31.6082,0	1/1:91:1,90:1:36:90:3171:-281.996,-23.7955,0
chr06	1630813	.	C	T	43662.8	PASS	AB=0.490429;ABP=7.2915;AC=41;AF=0.218085;AN=188;AO=2711;CIGAR=1X;DP=18611;DPB=18611;DPRA=1.28894;EPP=5777.5;EPPR=33971.2;GTI=3;LEN=1;MEANALT=1.11475;MQM=59.9845;MQMR=59.4935;NS=94;NUMALT=1;ODDS=1.20932;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96742;QR=566861;RO=15882;RPL=2698;RPP=5777.5;RPPR=33971.2;RPR=13;RUN=1;SAF=2711;SAP=5889.87;SAR=0;SRF=15882;SRP=34490.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:18,43:18:635:43:1535:-120.08,0,-39.1059	0/0:208:206,2:206:7356:2:72:0,-55.7775,-654.726	0/1:160:84,76:84:3004:76:2715:-196.428,0,-221.4	0/0:255:255,0:255:9113:0:0:0,-76.7626,-820.096	0/1:122:61,61:61:2184:61:2172:-159.021,0,-159.996	0/1:37:10,27:10:360:27:968:-76.2993,0,-21.6062	0/0:173:173,0:173:6163:0:0:0,-52.0782,-554.694	0/1:220:112,108:112:3995:108:3818:-277.594,0,-293.413	0/1:153:71,82:71:2536:82:2908:-215.897,0,-182.108	0/1:162:73,89:73:2612:89:3169:-236.667,0,-186.374	0/1:88:37,51:37:1320:51:1813:-136.959,0,-92.609	0/0:84:84,0:84:2994:0:0:0,-25.2865,-269.661	0/1:89:44,45:44:1568:45:1597:-117.227,0,-114.565	0/1:72:33,39:33:1180:39:1382:-103.003,0,-84.8237	0/0:58:58,0:58:2088:0:0:0,-17.4597,-188.095	0/1:66:32,34:32:1143:34:1207:-89.0673,0,-83.3015	0/0:59:59,0:59:2109:0:0:0,-17.7608,-190.029	0/1:80:43,37:43:1544:37:1315:-94.5686,0,-115.163	0/0:176:175,1:175:6252:1:36:0,-49.383,-558.914	0/0:281:277,3:277:9906:3:108:0,-74.5654,-881.213	0/1:191:90,101:90:3228:101:3598:-266.53,0,-233.229	0/0:111:111,0:111:3951:0:0:0,-33.4143,-355.381	0/1:95:45,50:45:1587:50:1796:-133.324,0,-114.48	0/1:184:88,96:88:3138:96:3435:-253.945,0,-227.241	0/0:104:100,1:100:3535:1:36:0,-27.1646,-314.751	0/0:422:421,0:421:15027:0:0:0,-126.734,-1350.57	0/1:329:184,145:184:6581:145:5181:-367.39,0,-492.827	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.648	0/1:447:181,266:181:6455:266:9498:-720.217,0,-446.393	0/1:194:85,109:85:3048:109:3881:-291.085,0,-216.089	0/0:127:126,1:126:4513:1:36:0,-34.6325,-402.677	0/0:614:611,3:611:21795:3:108:0,-174.757,-1950.18	0/0:342:341,0:341:12215:0:0:0,-102.651,-1098.59	0/0:894:888,6:888:31728:6:216:0,-249.33,-2833.43	0/0:948:939,6:939:33444:6:216:0,-264.956,-2985.92	0/0:1440:1436,1:1436:51231:1:36:0,-429.331,-4602.31	0/1:169:80,89:80:2833:89:3179:-235.46,0,-204.272	0/0:176:176,0:176:6296:0:0:0,-52.9813,-566.501	0/0:471:471,0:471:16754:0:0:0,-141.785,-1505.15	0/1:15:8,7:8:288:7:248:-18.1487,0,-21.7473	0/0:152:152,0:152:5436:0:0:0,-45.7566,-488.499	0/0:162:162,0:162:5778:0:0:0,-48.7669,-520.106	0/1:177:91,86:91:3247:86:3056:-221.986,0,-239.159	0/1:78:34,44:34:1224:44:1580:-119.011,0,-86.9736	0/1:60:36,24:36:1280:24:864:-60.0208,0,-97.4405	0/1:151:80,71:80:2855:71:2548:-184.115,0,-211.722	0/1:176:102,74:102:3640:74:2664:-187.024,0,-274.743	0/0:248:248,0:248:8859:0:0:0,-74.6554,-797.05	0/0:171:171,0:171:6136:0:0:0,-51.4761,-552.127	0/1:200:106,94:106:3785:94:3346:-241.151,0,-280.63	0/1:191:116,75:116:4145:75:2678:-183.767,0,-315.668	0/0:698:690,8:690:24654:8:284:0,-184.216,-2190.58	0/0:182:182,0:182:6518:0:0:0,-54.7875,-586.629	0/1:45:20,25:20:716:25:883:-66.2411,0,-51.0307	0/1:32:21,11:21:739:11:392:-25.9871,0,-57.1856	0/1:137:62,75:62:2228:75:2669:-199.209,0,-159.508	0/0:64:63,1:63:2256:1:29:0,-16.3829,-200.412	0/1:15:10,5:10:352:5:176:-11.6696,0,-27.5027	0/1:21:15,6:15:536:6:216:-13.4689,0,-42.2498	0/0:60:60,0:60:2135:0:0:0,-18.0618,-192.404	0/0:79:77,2:77:2736:2:72:0,-16.9446,-239.146	0/1:28:15,13:15:536:13:468:-34.0308,0,-40.1413	0/0:78:78,0:78:2785:0:0:0,-23.4803,-250.887	0/0:253:251,2:251:8951:2:68:0,-69.7029,-799.095	0/0:125:125,0:125:4484:0:0:0,-37.6287,-403.696	0/0:149:147,2:147:5253:2:72:0,-38.0167,-465.852	0/0:216:211,5:211:7493:5:180:0,-48.4704,-657.822	0/0:121:118,3:118:4205:3:108:0,-26.3495,-368.412	0/0:187:186,0:186:6653:0:0:0,-55.9916,-598.535	0/0:116:116,0:116:4133:0:0:0,-34.9195,-372.073	0/0:80:79,0:79:2828:0:0:0,-23.7814,-254.396	0/0:420:404,14:404:14414:14:496:0,-81.1367,-1251.35	0/0:79:79,0:79:2820:0:0:0,-23.7814,-253.88	0/1:87:56,31:56:1996:31:1116:-74.5621,0,-153.696	0/1:215:88,127:88:3144:127:4540:-344.046,0,-218.326	0/1:236:123,113:123:4416:113:4054:-294.004,0,-326.524	0/0:161:161,0:161:5731:0:0:0,-48.4658,-515.788	0/0:152:151,1:151:5395:1:36:0,-42.1583,-481.815	0/0:599:590,9:590:21067:9:315:0,-151.63,-1865.5	0/0:167:167,0:167:5946:0:0:0,-50.272,-535.185	0/0:185:183,1:183:6505:1:36:0,-52.1506,-581.426	0/0:348:348,0:348:12431:0:0:0,-104.758,-1117.86	0/0:74:74,0:74:2641:0:0:0,-22.2762,-237.923	0/0:79:79,0:79:2835:0:0:0,-23.7814,-255.385	0/1:74:30,44:30:1065:44:1576:-119.855,0,-73.8789	0/0:128:128,0:128:4527:0:0:0,-38.5318,-407.497	0/1:44:18,26:18:625:26:932:-70.9535,0,-43.3269	0/0:73:73,0:73:2582:0:0:0,-21.9752,-232.602	0/1:58:26,32:26:928:32:1141:-85.5384,0,-66.36	0/0:443:442,0:442:15828:0:0:0,-133.055,-1423.4	0/1:355:297,58:297:10613:58:2076:-80.2449,0,-847.988	0/1:67:17,50:17:600:50:1792:-141.391,0,-34.1602	0/0:112:112,0:112:3982:0:0:0,-33.7154,-357.88	0/0:93:93,0:93:3301:0:0:0,-27.9958,-297.249
chr06	1725155	.	T	C	37030.8	PASS	AB=0.515023;ABP=11.3618;AC=46;AF=0.244681;AN=188;AO=2208;CIGAR=1X;DP=9218;DPB=9218;DPRA=0.954851;EPP=4797.62;EPPR=15225;GTI=0;LEN=1;MEANALT=1;MQM=59.5326;MQMR=59.9385;NS=94;NUMALT=1;ODDS=10.6319;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78555;QR=249386;RO=7010;RPL=2208;RPP=4797.62;RPPR=15225;RPR=0;RUN=1;SAF=0;SAP=4797.62;SAR=2208;SRF=0;SRP=15225;SRR=7010;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:14,16:14:500:16:555:-41.2451,0,-36.3053	0/0:120:120,0:120:4260:0:0:0,-36.1236,-383.574	0/1:118:51,67:51:1832:67:2392:-179.962,0,-129.639	0/0:117:117,0:117:4103:0:0:0,-35.2205,-369.456	0/1:59:35,24:35:1260:24:860:-59.9185,0,-95.9447	0/1:33:17,16:17:612:16:572:-41.8794,0,-45.4794	0/0:107:107,0:107:3790:0:0:0,-32.2102,-341.298	0/1:195:101,94:101:3585:94:3321:-240.321,0,-264.154	0/1:39:11,28:11:392:28:992:-77.8542,0,-23.8799	0/1:103:45,58:45:1586:58:2076:-156.104,0,-112.02	0/1:214:112,102:112:3992:102:3628:-262.275,0,-295.051	0/0:96:96,0:96:3428:0:0:0,-28.8989,-308.724	0/1:62:35,27:35:1256:27:972:-69.0772,0,-94.653	0/1:179:73,106:73:2616:106:3782:-286.661,0,-181.803	0/0:64:64,0:64:2269:0:0:0,-19.2659,-204.457	0/1:127:64,63:64:2269:63:2230:-162.714,0,-166.24	0/0:111:111,0:111:3956:0:0:0,-33.4143,-356.233	0/1:85:40,45:40:1432:45:1600:-118.703,0,-103.59	0/0:102:102,0:102:3597:0:0:0,-30.7051,-323.94	0/0:120:120,0:120:4232:0:0:0,-36.1236,-381.059	0/1:124:61,63:61:2160:63:2248:-165.227,0,-157.34	0/0:76:76,0:76:2675:0:0:0,-22.8783,-240.933	0/1:30:8,22:8:280:22:788:-62.1962,0,-16.5084	0/1:92:47,45:47:1668:45:1604:-116.942,0,-122.696	0/0:64:63,1:63:2252:1:36:0,-15.6676,-199.345	0/0:133:133,0:133:4760:0:0:0,-40.037,-428.558	0/1:237:112,125:112:3996:125:4478:-331.761,0,-288.487	0/0:43:43,0:43:1525:0:0:0,-12.9443,-137.541	0/1:282:155,127:155:5501:127:4544:-324.149,0,-409.898	0/1:107:55,52:55:1945:52:1844:-133.976,0,-142.173	0/0:88:87,1:87:3081:1:36:0,-22.8924,-273.777	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/0:21:21,0:21:740:0:0:0,-6.32163,-66.9224	0/1:18:9,9:9:305:9:316:-23.303,0,-22.3587	0/1:12:5,7:5:180:7:233:-17.6528,0,-12.9397	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/1:210:101,109:101:3616:109:3880:-286.156,0,-262.429	0/0:184:184,0:184:6569:0:0:0,-55.3895,-591.278	0/0:155:155,0:155:5535:0:0:0,-46.6596,-497.903	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:135:134,1:134:4766:1:21:0,-38.5391,-426.997	0/0:85:85,0:85:3052:0:0:0,-25.5875,-274.909	0/1:105:44,61:44:1557:61:2139:-161.108,0,-108.812	0/1:64:43,21:43:1536:21:756:-49.1013,0,-119.267	0/1:52:25,27:25:896:27:958:-70.7499,0,-65.3068	0/1:55:25,30:25:888:30:1072:-80.2358,0,-63.6824	0/1:113:57,56:57:2048:56:1991:-145.177,0,-150.575	0/0:99:99,0:99:3510:0:0:0,-29.802,-316.109	0/0:72:72,0:72:2561:0:0:0,-21.6742,-230.739	0/1:143:81,62:81:2888:62:2209:-155.992,0,-217.095	0/1:133:62,71:62:2182:71:2513:-186.355,0,-156.606	0/1:12:5,7:5:180:7:252:-19.4166,0,-12.9397	0/0:133:133,0:133:4740:0:0:0,-40.037,-426.691	0/0:47:47,0:47:1661:0:0:0,-14.1484,-149.776	0/1:19:12,7:12:413:7:248:-16.9446,0,-31.7783	0/1:125:57,68:57:1972:68:2428:-180.949,0,-140.119	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/1:29:12,17:12:424:17:612:-46.6789,0,-29.7665	0/1:35:15,20:15:540:20:716:-54.2317,0,-38.4005	0/0:61:61,0:61:2153:0:0:0,-18.3628,-194.022	0/0:206:202,4:202:7205:4:144:0,-48.6986,-635.179	0/1:16:7,9:7:252:9:312:-23.5989,0,-18.2125	0/0:90:90,0:90:3166:0:0:0,-27.0927,-285.161	0/0:211:210,1:210:7485:1:36:0,-59.9191,-669.667	0/0:105:105,0:105:3729:0:0:0,-31.6081,-335.811	0/0:53:53,0:53:1888:0:0:0,-15.9546,-170.198	0/0:81:80,1:80:2826:1:36:0,-20.7852,-250.979	0/0:63:59,4:59:2093:4:144:0,-5.65127,-175.321	0/0:121:121,0:121:4304:0:0:0,-36.4246,-387.522	0/0:75:75,0:75:2657:0:0:0,-22.5772,-239.376	0/0:126:126,0:126:4496:0:0:0,-37.9298,-404.798	0/1:45:16,29:16:576:29:1021:-78.6457,0,-38.624	0/0:117:117,0:117:4153:0:0:0,-35.2205,-373.955	0/1:85:37,48:37:1328:48:1705:-128.047,0,-94.2313	0/1:119:55,64:55:1960:64:2292:-170.699,0,-140.853	0/1:161:86,75:86:3061:75:2664:-191.261,0,-227.253	0/0:107:107,0:107:3790:0:0:0,-32.2102,-341.27	0/0:142:142,0:142:5043:0:0:0,-42.7463,-453.986	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	0/0:130:130,0:130:4652:0:0:0,-39.1339,-418.842	0/0:86:86,0:86:3053:0:0:0,-25.8886,-274.999	0/0:197:197,0:197:7006:0:0:0,-59.3029,-630.603	0/0:105:105,0:105:3739:0:0:0,-31.6081,-336.711	0/0:83:82,1:82:2924:1:36:0,-21.3872,-259.797	0/1:72:36,36:36:1284:36:1275:-93.3699,0,-94.1893	0/0:119:119,0:119:4244:0:0:0,-35.8226,-382.141	0/1:31:12,19:12:417:19:684:-52.5299,0,-28.5283	0/0:104:104,0:104:3708:0:0:0,-31.3071,-333.923	0/1:95:48,47:48:1720:47:1680:-122.861,0,-126.488	0/0:201:201,0:201:7197:0:0:0,-60.507,-647.78	0/1:287:143,144:143:5120:144:5102:-372.847,0,-374.546	0/1:71:21,50:21:752:50:1766:-137.841,0,-46.6331	0/0:38:38,0:38:1348:0:0:0,-11.4391,-121.62	0/0:113:113,0:113:4056:0:0:0,-34.0164,-365.226
chr06	1746589	.	G	A	348592	PASS	AB=0.515588;ABP=38.4835;AC=125;AF=0.664894;AN=188;AO=17376;CIGAR=1X;DP=25566;DPB=25566;DPRA=0;EPP=37734.5;EPPR=17774.3;GTI=1;LEN=1;MEANALT=1.06383;MQM=59.8425;MQMR=53.9249;NS=94;NUMALT=1;ODDS=5.42401;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=617853;QR=288632;RO=8184;RPL=32;RPP=37457.1;RPPR=2542.98;RPR=17344;RUN=1;SAF=32;SAP=37457.1;SAR=17344;SRF=2545;SRP=2542.98;SRR=5639;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:159:87,72:87:3035:72:2535:-180.536,0,-215.121	1/1:598:1,597:1:36:597:21191:-1903.01,-176.592,0	0/1:380:294,86:294:10318:86:3088:-163.598,0,-789.08	0/1:585:126,458:126:4414:458:16255:-1286.59,0,-221.21	0/1:422:201,221:201:7102:221:7873:-581.528,0,-499.776	0/1:207:100,107:100:3530:107:3823:-281.947,0,-251.715	1/1:398:0,398:0:0:398:14123:-1270.78,-119.81,0	0/1:460:320,140:320:11287:140:5015:-313.021,0,-860.856	0/1:312:245,67:245:8646:67:2389:-121.344,0,-668.641	0/1:273:148,125:148:5167:125:4441:-317.677,0,-379.482	0/1:80:62,18:62:2184:18:636:-33.2925,0,-170.088	0/1:157:21,136:21:744:136:4827:-387.317,0,-19.9867	0/1:121:96,25:96:3428:25:891:-44.0841,0,-265.687	0/1:159:76,83:76:2643:83:2953:-218.031,0,-187.624	1/1:81:0,81:0:0:81:2876:-259.055,-24.3834,0	0/1:138:100,38:100:3505:38:1364:-81.517,0,-270.824	1/1:133:2,131:2:72:131:4644:-411.452,-33.3662,0	0/1:110:80,30:80:2838:30:1080:-64.4,0,-220.526	1/1:56:0,56:0:0:56:1987:-179.032,-16.8577,0	1/1:513:3,510:3:108:510:18194:-1626.89,-144.353,0	0/1:564:320,244:320:11280:244:8638:-607.26,0,-831.82	1/1:232:0,232:0:0:232:8204:-738.373,-69.839,0	0/1:357:189,168:189:6659:168:5962:-429.165,0,-482.53	0/1:393:252,141:252:8889:141:4994:-331.301,0,-676.14	1/1:239:1,238:1:36:238:8410:-753.306,-68.3479,0	0/1:1137:192,945:192:6737:945:33490:-2670.53,0,-263.976	0/1:657:464,192:464:16466:192:6835:-417.378,0,-1253.92	1/1:60:0,60:0:0:60:2137:-192.592,-18.0618,0	0/1:1048:597,450:597:21111:450:16051:-1128.7,0,-1569.85	0/1:349:249,100:249:8804:100:3555:-214.168,0,-680.227	0/1:485:72,413:72:2556:413:14687:-1175.55,0,-84.1168	0/1:10:4,6:4:129:6:216:-16.7802,0,-8.91736	1/1:22:0,22:0:0:22:775:-70.0712,-6.62266,0	0/1:24:8,16:8:284:16:572:-44.5878,0,-18.3599	0/1:15:7,8:7:239:8:282:-21.2038,0,-17.3273	0/1:11:5,6:5:180:6:216:-16.4764,0,-13.2407	0/1:464:271,193:271:9558:193:6857:-477.52,0,-715.706	1/1:307:1,306:1:36:306:10852:-972.925,-88.8179,0	1/1:89:0,89:0:0:89:3166:-285.156,-26.7917,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.5909	1/1:481:1,480:1:36:480:17102:-1535.02,-141.197,0	1/1:36:0,36:0:0:36:1259:-113.607,-10.8371,0	0/1:418:188,230:188:6659:230:8174:-609.571,0,-462.35	0/1:150:59,91:59:2059:91:3251:-247.647,0,-138.117	0/1:97:69,28:69:2452:28:996:-60.755,0,-188.823	0/1:323:190,133:190:6723:133:4739:-329.431,0,-500.703	0/1:220:155,65:155:5444:65:2301:-141.123,0,-408.771	0/1:526:117,409:117:4159:409:14524:-1148.47,0,-215.898	1/1:365:0,365:0:0:365:12989:-1168.74,-109.876,0	0/1:482:369,113:369:13034:113:4043:-218.954,0,-1018.27	0/1:408:210,198:210:7391:198:7004:-507.601,0,-534.766	0/1:13:7,6:7:252:6:212:-15.5114,0,-18.9036	0/1:454:94,360:94:3264:360:12878:-1022,0,-156.752	0/1:81:14,67:14:481:67:2388:-190.782,0,-17.9104	0/1:12:9,3:9:311:3:108:-6.46281,0,-24.7114	0/1:393:304,89:304:10715:89:3180:-168.118,0,-834.901	1/1:155:1,154:1:36:154:5465:-488.45,-43.1386,0	0/0:12:11,1:11:387:1:36:0,-0.0140849,-30.7769	0/1:23:15,8:15:540:8:271:-17.7954,0,-41.5617	1/1:225:0,225:0:0:225:8007:-720.649,-67.7318,0	0/1:186:57,129:57:2039:129:4618:-359.288,0,-126.754	0/1:5:3,2:3:95:2:68:-4.95256,0,-7.35906	1/1:653:1,652:1:36:652:23297:-2092.45,-192.974,0	1/1:632:4,627:4:144:627:22279:-1991.12,-177.138,0	1/1:276:3,273:3:108:273:9724:-865.025,-73.0091,0	0/1:279:53,226:53:1896:226:8061:-641.476,0,-86.9307	0/1:415:107,308:107:3783:308:10952:-859.838,0,-215.53	1/1:278:7,271:7:252:271:9630:-843.863,-61.0106,0	1/1:23:0,23:0:0:23:820:-74.121,-6.92369,0	1/1:232:0,232:0:0:232:8278:-744.847,-69.839,0	0/1:172:47,125:47:1662:125:4435:-347.486,0,-98.0568	0/1:63:36,27:36:1271:27:953:-67.0416,0,-94.2264	1/1:209:0,209:0:0:209:7458:-671.243,-62.9153,0	0/1:176:108,68:108:3833:68:2417:-164.745,0,-282.264	0/1:495:339,156:339:11922:156:5483:-344.425,0,-908.893	0/1:379:255,124:255:9036:124:4388:-280.994,0,-688.641	1/1:643:1,641:1:36:641:22794:-2047.27,-190.189,0	0/1:517:112,405:112:3960:405:14421:-1141.98,0,-200.782	0/1:26:23,3:23:815:3:108:-2.24839,0,-64.4212	1/1:337:1,336:1:32:336:11983:-1074.59,-98.2478,0	0/1:466:56,410:56:1987:410:14574:-1171.13,0,-36.9946	1/1:623:2,621:2:72:621:22081:-1979.79,-180.705,0	1/1:203:3,200:3:99:200:7151:-634.242,-51.8725,0	0/1:131:38,93:38:1341:93:3318:-259.396,0,-81.3275	0/1:181:79,102:79:2745:102:3643:-273.584,0,-190.115	1/1:189:2,186:2:68:186:6613:-588.814,-50.5346,0	0/1:74:52,22:52:1827:22:792:-49.3295,0,-140.153	1/1:139:0,139:0:0:139:4866:-437.798,-41.8432,0	0/1:155:114,41:114:3986:41:1468:-85.7564,0,-301.109	0/1:47:8,39:8:284:39:1379:-110.257,0,-11.7545	0/1:136:92,44:92:3216:44:1564:-100.043,0,-243.344	0/1:223:170,53:170:5979:53:1872:-101.624,0,-464.929	1/1:210:0,210:0:0:210:7430:-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chr06	1746642	.	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chr06	2060113	.	C	T	221178	PASS	AB=0.542035;ABP=77.6755;AC=144;AF=0.765957;AN=188;AO=10382;CIGAR=1X;DP=12621;DPB=12621;DPRA=0;EPP=22425.8;EPPR=4828.08;GTI=2;LEN=1;MEANALT=1.01064;MQM=59.9502;MQMR=59.9937;NS=94;NUMALT=1;ODDS=6.70881;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=366566;QR=80012;RO=2238;RPL=14;RPP=22425.8;RPPR=4828.08;RPR=10368;RUN=1;SAF=0;SAP=22547.2;SAR=10382;SRF=0;SRP=4862.77;SRR=2238;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:18,43:18:648:43:1502:-117.106,0,-40.2891	1/1:218:1,217:1:36:217:7677:-687.373,-62.0263,0	0/1:133:39,94:39:1404:94:3322:-258.971,0,-86.6223	1/1:368:0,368:0:0:368:13030:-1172.51,-110.779,0	0/1:112:35,77:35:1260:77:2694:-208.989,0,-79.9901	0/1:66:26,40:26:913:40:1418:-108.049,0,-62.616	1/1:157:0,157:0:0:157:5556:-500.169,-47.2617,0	0/1:174:83,91:83:2976:91:3206:-236.386,0,-215.685	0/1:121:69,52:69:2433:52:1860:-131.255,0,-182.798	0/1:142:73,69:73:2605:69:2452:-178.154,0,-191.95	0/1:65:33,32:33:1173:32:1144:-83.697,0,-86.3086	1/1:49:0,49:0:0:49:1732:-155.957,-14.7505,0	0/1:53:34,19:34:1186:19:684:-45.9357,0,-91.0862	0/1:77:43,34:43:1540:34:1224:-87.2877,0,-115.714	1/1:60:0,60:0:0:60:2130:-191.968,-18.0618,0	0/1:57:31,26:31:1116:26:936:-67.4008,0,-83.593	1/1:70:0,70:0:0:70:2503:-225.523,-21.0721,0	1/1:59:0,59:0:0:59:2104:-189.63,-17.7608,0	1/1:30:0,30:0:0:30:1065:-96.1606,-9.0309,0	1/1:308:1,307:1:36:307:10833:-971.291,-89.119,0	0/1:190:104,86:104:3702:86:3025:-215.279,0,-276.184	1/1:273:0,273:0:0:273:9599:-863.882,-82.1812,0	0/1:188:97,91:97:3465:91:3221:-233.52,0,-255.467	0/1:229:93,136:93:3328:136:4823:-365.294,0,-230.802	0/1:92:41,51:41:1468:51:1790:-133.684,0,-104.721	1/1:338:1,337:1:36:337:11961:-1072.76,-98.1499,0	1/1:223:0,223:0:0:223:7794:-701.413,-67.1297,0	1/1:44:0,44:0:0:44:1560:-140.679,-13.2453,0	0/1:455:188,267:188:6729:267:9402:-709.152,0,-468.714	0/1:229:135,93:135:4848:93:3292:-227.503,0,-367.477	1/1:127:0,127:0:0:127:4467:-402.203,-38.2308,0	0/1:19:5,14:5:176:14:496:-39.2547,0,-10.4654	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	0/1:25:8,17:8:288:17:593:-46.169,0,-18.7417	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	0/1:163:84,79:84:3020:79:2814:-204.431,0,-222.962	1/1:285:0,285:0:0:285:10098:-908.765,-85.7936,0	1/1:39:0,39:0:0:39:1392:-125.579,-11.7402,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:196:0,196:0:0:196:6937:-624.404,-59.0019,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:218:83,135:83:2957:135:4774:-364.195,0,-200.738	0/1:74:29,45:29:1021:45:1608:-122.734,0,-69.924	0/1:76:40,36:40:1440:36:1265:-91.2723,0,-107.019	0/1:146:66,80:66:2357:80:2848:-212.607,0,-168.437	0/1:169:78,91:78:2773:91:3220:-239.149,0,-198.936	1/1:278:0,278:0:0:278:9843:-885.811,-83.6863,0	1/1:215:0,215:0:0:215:7514:-676.314,-64.7215,0	0/1:218:87,131:87:3112:131:4566:-345.478,0,-214.683	0/1:256:91,165:91:3255:165:5784:-443.603,0,-216.107	0/1:27:16,11:16:572:11:388:-27.1296,0,-43.6856	1/1:184:0,184:0:0:184:6479:-583.204,-55.3895,0	1/1:51:0,51:0:0:51:1780:-160.483,-15.3525,0	0/1:45:17,28:17:608:28:981:-75.0547,0,-41.5057	0/1:192:81,111:81:2901:111:3901:-293.493,0,-203.526	1/1:104:0,104:0:0:104:3666:-330.145,-31.3071,0	0/1:20:11,9:11:392:9:320:-23.1218,0,-29.5995	0/1:24:13,11:13:468:11:396:-28.758,0,-35.2349	0/1:118:52,66:52:1853:66:2306:-172.277,0,-131.522	1/1:74:0,74:0:0:74:2636:-237.485,-22.2762,0	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	1/1:417:0,417:0:0:417:14690:-1321.87,-125.53,0	1/1:344:5,339:5:180:339:11972:-1060.8,-87.0023,0	1/1:113:0,113:0:0:113:4002:-360.368,-34.0164,0	1/1:118:0,118:0:0:118:4120:-370.989,-35.5215,0	1/1:341:0,341:0:0:341:12140:-1092.46,-102.651,0	1/1:88:0,88:0:0:88:3117:-280.757,-26.4906,0	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:102:0,102:0:0:102:3565:-320.794,-30.7051,0	1/1:73:0,73:0:0:73:2612:-235.328,-21.9752,0	0/1:33:18,15:18:648:15:536:-38.6408,0,-48.7179	1/1:150:0,150:0:0:150:5236:-471.355,-45.1545,0	0/1:88:48,40:48:1720:40:1392:-99.0863,0,-128.595	0/1:207:104,103:104:3740:103:3656:-266.933,0,-274.486	1/1:286:0,286:0:0:286:10043:-903.83,-86.0946,0	1/1:110:0,110:0:0:110:3904:-351.557,-33.1133,0	1/1:179:2,177:2:72:177:6209:-552.06,-47.0476,0	0/1:20:11,9:11:396:9:324:-23.4853,0,-29.9621	1/1:225:0,225:0:0:225:7850:-706.548,-67.7318,0	1/1:309:0,309:0:0:309:10928:-983.074,-93.0183,0	1/1:370:0,370:0:0:370:12879:-1158.76,-111.381,0	1/1:86:0,86:0:0:86:3088:-278.145,-25.8886,0	1/1:74:0,74:0:0:74:2644:-238.207,-22.2762,0	0/1:98:38,60:38:1349:60:2117:-161.296,0,-92.2073	1/1:129:0,129:0:0:129:4620:-415.834,-38.8329,0	0/1:30:12,18:12:432:18:648:-49.621,0,-30.1903	1/1:74:0,74:0:0:74:2632:-237.128,-22.2762,0	1/1:63:1,62:1:36:62:2207:-195.287,-15.3666,0	1/1:21:0,21:0:0:21:744:-67.2843,-6.32163,0	0/1:68:32,36:32:1148:36:1276:-94.673,0,-83.1598	0/1:57:41,16:41:1476:16:576:-35.0163,0,-115.977	1/1:164:0,164:0:0:164:5800:-522.112,-49.3689,0	1/1:78:0,78:0:0:78:2772:-249.705,-23.4803,0
chr06	2177650	.	C	A	141218	PASS	AB=0.429405;ABP=396.367;AC=144;AF=0.765957;AN=188;AO=9964;CIGAR=1X;DP=15167;DPB=15167;DPRA=0;EPP=21639.6;EPPR=11286;GTI=6;LEN=1;MEANALT=1.07447;MQM=30.2207;MQMR=24.8179;NS=94;NUMALT=1;ODDS=3.62132;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=355642;QR=185664;RO=5196;RPL=0;RPP=21639.6;RPPR=11286;RPR=9964;RUN=1;SAF=0;SAP=21639.6;SAR=9964;SRF=0;SRP=11286;SRR=5196;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:8:2,6:2:72:6:197:-12.6575,0,-1.73975	1/1:125:0,124:0:0:124:4428:-323.75,-37.3277,0	0/1:73:38,35:38:1364:35:1252:-69.6148,0,-52.8849	1/1:101:0,101:0:0:101:3594:-262.222,-30.404,0	0/1:29:11,17:11:396:17:593:-35.106,0,-15.0206	0/1:45:17,28:17:608:28:1008:-60.1755,0,-20.0522	1/1:123:0,123:0:0:123:4398:-320.041,-37.0267,0	0/1:103:51,52:51:1832:52:1868:-105.17,0,-69.3098	0/1:41:17,24:17:604:24:864:-50.7183,0,-21.2343	0/1:65:34,31:34:1216:31:1112:-61.5488,0,-61.3744	0/1:348:182,166:182:6508:166:5916:-327.226,0,-326.808	1/1:67:0,67:0:0:67:2395:-174.848,-20.169,0	0/1:65:24,41:24:860:41:1460:-88.0019,0,-27.7855	0/1:75:40,35:40:1432:35:1256:-68.9725,0,-62.6964	1/1:75:0,75:0:0:75:2679:-194.979,-22.5773,0	0/1:83:40,43:40:1424:43:1540:-87.3605,0,-60.2327	1/1:52:0,52:0:0:52:1860:-136.446,-15.6536,0	1/1:64:0,64:0:0:64:2287:-166.389,-19.2659,0	1/1:191:0,191:0:0:191:6851:-500.309,-57.4967,0	1/1:85:0,85:0:0:85:3018:-220.433,-25.5876,0	0/1:87:51,36:51:1771:36:1288:-67.9954,0,-81.381	1/1:78:0,78:0:0:78:2792:-214.198,-23.4803,0	0/1:38:20,18:20:720:18:640:-34.9285,0,-36.5005	0/1:44:9,35:9:324:35:1243:-77.9322,0,-6.21763	0/1:49:25,24:25:900:24:860:-48.1355,0,-38.7192	1/1:175:0,175:0:0:175:6229:-474.745,-52.6803,0	1/1:148:0,148:0:0:148:5274:-384.217,-44.5524,0	1/1:37:0,37:0:0:37:1320:-96.5207,-11.1381,0	0/1:143:67,76:67:2389:76:2708:-163.635,0,-125.656	0/1:72:40,32:40:1428:32:1140:-62.1727,0,-63.566	1/1:65:0,65:0:0:65:2302:-168.355,-19.567,0	0/1:584:353,231:353:12641:231:8272:-426.956,0,-576.911	1/1:447:0,447:0:0:447:15955:-1162.67,-134.56,0	0/1:446:352,94:352:12562:94:3345:-110.385,0,-556.725	0/1:760:494,266:494:17602:266:9481:-463.548,0,-741.174	1/1:327:0,327:0:0:327:11664:-852.212,-98.4368,0	0/1:174:92,82:92:3292:82:2940:-169.091,0,-180.894	1/1:140:0,140:0:0:140:5001:-363.244,-42.1442,0	1/1:431:0,430:0:0:430:15391:-1120.86,-129.443,0	0/1:308:205,103:205:7314:103:3673:-175.584,0,-343.133	1/1:73:0,73:0:0:73:2628:-190.928,-21.9752,0	1/1:230:0,230:0:0:230:8247:-599.886,-69.2369,0	0/1:46:15,31:15:536:31:1112:-67.3261,0,-18.3989	0/1:53:27,26:27:968:26:915:-51.606,0,-48.61	0/1:66:35,31:35:1256:31:1092:-60.8564,0,-63.5183	0/1:101:39,62:39:1404:62:2224:-138.139,0,-68.7424	0/1:69:26,43:26:936:43:1502:-90.0993,0,-30.533	1/1:104:0,104:0:0:104:3700:-269.764,-31.3071,0	1/1:80:0,80:0:0:80:2872:-209.079,-24.0824,0	0/1:62:34,28:34:1207:28:981:-53.6927,0,-61.8041	0/1:101:54,47:54:1944:47:1688:-98.8312,0,-106.827	0/1:462:314,148:314:11210:148:5294:-246.976,0,-603.681	1/1:71:0,71:0:0:71:2544:-185.796,-21.3731,0	1/1:31:0,31:0:0:31:1104:-84.9688,-9.33193,0	0/1:583:289,294:289:10331:294:10460:-589.607,0,-391.581	0/1:74:40,34:40:1436:34:1203:-66.2553,0,-63.031	1/1:17:0,17:0:0:17:593:-43.8248,-5.11751,0	0/1:451:291,160:291:10397:160:5686:-293.18,0,-600.255	0/1:656:327,329:327:11688:329:11729:-697.702,0,-630.468	0/1:59:39,20:39:1392:20:698:-33.3733,0,-65.6868	1/1:97:2,95:2:72:95:3397:-242.849,-24.1676,0	0/1:318:207,110:207:7374:110:3923:-191.491,0,-394.168	1/1:122:0,122:0:0:122:4315:-331.243,-36.7257,0	1/1:199:1,198:1:36:198:7065:-513.219,-57.2564,0	1/1:45:0,45:0:0:45:1612:-117.497,-13.5464,0	1/1:34:0,34:0:0:34:1201:-88.1361,-10.235,0	1/1:92:2,90:2:72:90:3209:-229.697,-22.6624,0	1/1:120:1,119:1:36:119:4257:-307.298,-33.475,0	1/1:288:0,287:0:0:287:10213:-746.629,-86.3956,0	1/1:79:0,79:0:0:79:2840:-206.696,-23.7814,0	1/1:77:0,77:0:0:77:2754:-210.256,-23.1793,0	0/1:492:251,241:251:8967:241:8635:-480.227,0,-447.102	1/1:148:1,147:1:36:147:5267:-379.401,-41.1648,0	0/1:43:20,23:20:720:23:820:-47.4329,0,-26.5707	0/1:128:59,69:59:2104:69:2467:-141.608,0,-87.0573	1/1:83:0,83:0:0:83:2972:-216.076,-24.9855,0	1/1:63:0,63:0:0:63:2260:-164.863,-18.9649,0	1/1:49:0,49:0:0:49:1756:-128.358,-14.7505,0	0/1:697:394,303:394:14100:303:10788:-575.543,0,-563.737	1/1:64:1,63:1:36:63:2245:-161.453,-16.8924,0	1/1:38:0,38:0:0:38:1368:-99.5648,-11.4391,0	1/1:217:5,211:5:180:211:7532:-537.819,-53.5516,0	1/1:114:0,114:0:0:114:4084:-298.447,-34.3174,0	1/1:61:0,61:0:0:61:2180:-159.237,-18.3628,0	0/1:72:41,31:41:1445:31:1116:-59.5999,0,-74.5595	1/1:137:0,137:0:0:137:4887:-356.998,-41.2411,0	0/1:52:22,30:22:788:30:1076:-62.9779,0,-27.7692	1/1:78:0,78:0:0:78:2786:-203.174,-23.4803,0	1/1:62:0,62:0:0:62:2198:-160.897,-18.6639,0	1/1:375:0,374:0:0:374:13378:-975.056,-112.585,0	0/1:814:463,351:463:16582:351:12496:-666.642,0,-743.232	0/1:48:32,16:32:1152:16:568:-27.4321,0,-62.0951	1/1:12:0,12:0:0:12:432:-31.6401,-3.61236,0	1/1:89:0,89:0:0:89:3179:-231.878,-26.7917,0
chr06	2177682	.	GTCC	ATCC,ATCT	191702	PASS	AB=0.427183,0.571943;ABP=424.872,414.813;AC=144,44;AF=0.765957,0.234043;AN=188;AO=9972,5252;CIGAR=1X3M,1X2M1X;DP=15235;DPB=15235;DPRA=0,1.74297;EPP=21656.9,11407.6;EPPR=11.6962;GTI=6;LEN=1,4;MEANALT=1.60638,2.11765;MQM=30.2215,24.7987;MQMR=39;NS=94;NUMALT=2;ODDS=2.57055;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=300786,186844;QR=144;RO=4;RPL=9972,5252;RPP=21656.9,11407.6;RPPR=11.6962;RPR=0,0;RUN=1,1;SAF=0,0;SAP=21656.9,11407.6;SAR=9972,5252;SRF=0;SRP=11.6962;SRR=4;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:7:0,5,2:0:0:5,2:150,72:-14.224,-3.54593,-2.04078,-10.9111,0,-10.3091	1/1:126:0,126,0:0:0:126,0:3791,0:-307.348,-37.9298,0,-307.348,-37.9298,-307.348	1/2:72:0,34,38:0:0:34,38:1021,1354:-135.826,-63.351,-53.116,-72.7203,0,-61.2811	1/1:99:1,98,0:1:36:98,0:2939,0:-235.345,-26.8992,0,-235.646,-29.5009,-237.958	1/2:29:0,18,11:0:0:18,11:540,395:-58.7465,-20.418,-14.9994,-38.5782,0,-35.2669	1/2:45:0,28,17:0:0:28,17:844,611:-88.4827,-28.4992,-20.0703,-60.2219,0,-55.1044	1/1:121:0,121,0:0:0:121,0:3607,0:-292.478,-36.4246,0,-292.478,-36.4246,-292.478	1/2:105:0,54,51:0:0:54,51:1615,1818:-199.438,-84.7963,-68.5406,-114.885,0,-99.5321	1/2:42:0,24,18:0:0:24,18:721,636:-81.2172,-30.0193,-22.7946,-51.438,0,-46.0195	1/2:65:0,31,34:0:0:31,34:929,1209:-136.471,-70.5825,-61.2506,-66.155,0,-55.92	1/2:351:0,166,185:0:0:166,185:4981,6567:-735.333,-381.952,-331.981,-353.648,0,-297.957	1/1:68:0,68,0:0:0:68,0:2039,0:-165.37,-20.47,0,-165.37,-20.47,-165.37	1/2:66:0,41,25:0:0:41,25:1239,899:-129.91,-41.8096,-29.4674,-88.3396,0,-80.8138	1/2:73:0,34,39:0:0:34,39:1019,1363:-142.957,-70.6698,-60.4348,-72.5398,0,-60.7996	1/1:80:0,80,0:0:0:80,0:2387,0:-193.441,-24.0824,0,-193.441,-24.0824,-193.441	1/2:86:0,44,42:0:0:44,42:1319,1498:-170.253,-76.6826,-63.4373,-93.8222,0,-81.179	1/1:54:0,54,0:0:0:54,0:1620,0:-131.692,-16.2556,0,-131.692,-16.2556,-131.692	1/1:63:0,63,0:0:0:63,0:1882,0:-152.594,-18.9649,0,-152.594,-18.9649,-152.594	1/1:191:2,189,0:2:72:189,0:5676,0:-453.253,-50.8068,0,-453.855,-56.8947,-459.591	1/1:87:0,87,0:0:0:87,0:2604,0:-211.189,-26.1896,0,-211.189,-26.1896,-211.189	1/2:89:0,36,53:0:0:36,53:1078,1887:-173.54,-96.9779,-86.1408,-76.8185,0,-60.8639	1/1:75:0,75,0:0:0:75,0:2399,0:-195.932,-22.5773,0,-195.932,-22.5773,-195.932	1/2:38:0,18,20:0:0:18,20:531,709:-79.2338,-41.7337,-36.3151,-37.7646,0,-31.744	1/2:45:0,36,9:0:0:36,9:1071,324:-92.8096,-16.7537,-5.9166,-76.2994,0,-73.5902	1/2:50:0,25,25:0:0:25,25:750,897:-99.1487,-45.926,-38.4003,-53.4759,0,-45.9501	1/1:174:0,174,0:0:0:174,0:5502,0:-448.593,-52.3792,0,-448.593,-52.3792,-448.593	1/1:142:0,142,0:0:0:142,0:4253,0:-344.596,-42.7463,0,-344.596,-42.7463,-344.596	1/1:37:0,37,0:0:0:37,0:1108,0:-89.9724,-11.1381,0,-89.9724,-11.1381,-89.9724	1/2:143:0,75,68:0:0:75,68:2375,2408:-321.499,-150.389,-127.812,-171.392,0,-150.922	1/2:73:0,33,40:0:0:33,40:995,1430:-144.118,-73.2206,-63.2866,-71.1537,0,-59.1125	1/1:66:0,66,0:0:0:66,0:1943,0:-158.155,-19.868,0,-158.155,-19.868,-158.155	1/2:583:0,228,355:0:0:228,355:6827,12636:-1133.76,-649.229,-580.594,-484.787,0,-377.922	1/1:449:0,449,0:0:0:449,0:13466,0:-1090.88,-135.162,0,-1090.88,-135.162,-1090.88	1/2:448:0,92,356:0:0:92,356:2755,12640:-786.845,-591.262,-563.567,-195.842,0,-88.6755	1/2:773:0,268,504:0:0:268,504:8028,17945:-1407.39,-837.325,-756.649,-570.143,0,-418.424	1/1:324:0,323,1:0:0:323,1:9671,36:-783.678,-97.2327,0,-782.014,-95.3506,-781.713	1/2:175:0,83,92:0:0:83,92:2594,3283:-391.591,-205.344,-180.358,-186.529,0,-158.834	1/1:144:0,144,0:0:0:144,0:4300,0:-348.286,-43.3483,0,-348.286,-43.3483,-348.286	1/1:435:0,435,0:0:0:435,0:13027,0:-1055.93,-130.948,0,-1055.93,-130.948,-1055.93	1/2:320:0,112,208:0:0:112,208:3345,7370:-616.97,-379.332,-345.617,-237.895,0,-175.281	1/1:70:0,70,0:0:0:70,0:2090,0:-169.642,-21.0721,0,-169.642,-21.0721,-169.642	1/1:231:0,231,0:0:0:231,0:6929,0:-561.342,-69.5379,0,-561.342,-69.5379,-561.342	1/2:45:0,30,15:0:0:30,15:900,526:-91.4327,-27.5628,-18.5319,-64.1171,0,-59.6016	1/2:54:0,27,27:0:0:27,27:801,967:-113.318,-56.4397,-48.3119,-57.1447,0,-49.0169	1/2:67:0,32,35:0:0:32,35:958,1254:-140.837,-72.7987,-63.1658,-68.3055,0,-57.7694	1/2:101:0,62,39:0:0:62,39:1938,1392:-226.592,-87.1544,-68.4905,-139.719,0,-127.979	1/2:68:0,42,26:0:0:42,26:1265,932:-133.33,-43.4619,-30.8186,-90.107,0,-82.2802	1/1:99:0,99,0:0:0:99,0:2951,0:-239.282,-29.802,0,-239.282,-29.802,-239.282	1/1:82:0,82,0:0:0:82,0:2444,0:-198.254,-24.6845,0,-198.254,-24.6845,-198.254	1/2:62:0,27,35:0:0:27,35:810,1246:-129.91,-72.4446,-64.3167,-57.7324,0,-47.1963	1/2:103:0,49,54:0:0:49,54:1564,1929:-233.413,-120.669,-105.919,-113.029,0,-96.7738	1/2:463:0,147,315:0:0:147,315:4399,11197:-962.256,-650.056,-605.804,-312.207,0,-217.383	1/1:73:0,73,0:0:0:73,0:2195,0:-178.057,-21.9752,0,-178.057,-21.9752,-178.057	1/1:28:0,28,0:0:0:28,0:894,0:-73.1668,-8.42884,0,-73.1668,-8.42884,-73.1668	1/2:589:0,297,289:0:0:297,289:8906,10230:-1111.46,-479.37,-389.964,-632.117,0,-545.119	1/2:75:0,35,40:0:0:35,40:1051,1407:-147.594,-72.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chr06	2178366	.	C	A	10516.6	PASS	AB=0.247025;ABP=3085.84;AC=59;AF=0.31383;AN=188;AO=1627;CIGAR=1X;DP=10025;DPB=10025;DPRA=4.19894;EPP=3536;EPPR=18236.9;GTI=26;LEN=1;MEANALT=1.01111;MQM=44.5857;MQMR=53.9359;NS=94;NUMALT=1;ODDS=0.487601;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57666;QR=299183;RO=8397;RPL=1;RPP=3527.32;RPPR=18219.5;RPR=1626;RUN=1;SAF=1;SAP=3527.32;SAR=1626;SRF=8395;SRP=18219.5;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:72:72,0:72:2545:0:0:0,-21.6742,-229.122	0/1:93:84,9:84:3003:9:324:-1.44937,0,-241.473	0/0:230:215,15:215:7678:15:536:0,-28.8665,-635.007	0/1:290:259,31:259:9245:31:1104:-11.8837,0,-739.195	0/0:35:33,2:33:1179:2:72:0,-5.67451,-100.222	0/0:18:17,1:17:604:1:36:0,-1.82712,-50.6327	0/1:69:50,19:50:1796:19:676:-40.1926,0,-141.121	0/0:177:169,8:169:6023:8:284:0,-31.4509,-519.346	0/1:90:70,20:70:2504:20:720:-25.065,0,-194.004	0/1:110:72,38:72:2580:38:1343:-67.8695,0,-199.33	0/1:65:48,17:48:1699:17:600:-23.4096,0,-132.817	0/1:122:100,22:100:3549:22:792:-34.5918,0,-282.296	0/1:89:60,29:60:2128:29:1032:-52.9298,0,-160.807	0/1:97:77,20:77:2723:20:708:-21.6243,0,-215.322	0/1:96:66,30:66:2355:30:1072:-66.982,0,-183.201	0/1:87:70,17:70:2495:17:612:-17.8821,0,-198.297	0/1:59:43,16:43:1510:16:559:-32.7903,0,-116.174	0/1:42:28,14:28:1000:14:495:-31.9741,0,-76.4433	0/1:33:23,10:23:811:10:356:-22.3886,0,-63.2587	0/0:191:185,6:185:6603:6:216:0,-38.0321,-574.624	0/1:133:78,55:78:2784:55:1951:-104.796,0,-207.977	0/0:85:84,1:84:2993:1:36:0,-21.9944,-265.89	0/0:140:126,14:126:4499:14:500:0,-6.27479,-365.631	0/0:102:97,5:97:3457:5:180:0,-17.0388,-296.783	0/0:80:78,2:78:2796:2:63:0,-19.0879,-246.073	0/1:266:215,51:215:7649:51:1823:-83.9166,0,-602.601	0/0:279:264,15:264:9421:15:527:0,-36.5828,-786.134	0/1:39:28,11:28:989:11:387:-23.3445,0,-76.0357	0/0:385:354,31:354:12599:31:1112:0,-32.854,-1041.04	0/1:150:125,25:125:4466:25:896:-16.3482,0,-347.649	0/1:98:83,15:83:2964:15:540:-18.3181,0,-236.364	0/1:10:5,5:5:180:5:167:-11.3709,0,-13.4443	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.7299	0/1:12:10,2:10:360:2:72:-3.21539,0,-28.7747	0/1:6:3,3:3:108:3:104:-7.88127,0,-8.00138	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.032	0/1:242:171,71:171:6122:71:2524:-119.407,0,-477.906	0/0:122:114,8:114:4075:8:284:0,-10.8807,-339.779	0/1:40:30,10:30:1072:10:343:-18.8533,0,-83.6519	0/1:6:5,1:5:180:1:36:-1.78305,0,-14.7339	0/1:126:111,15:111:3956:15:540:-10.6806,0,-313.317	0/1:32:25,7:25:892:7:248:-12.9783,0,-70.8234	0/0:245:241,4:241:8591:4:144:0,-63.3319,-761.426	0/1:81:53,28:53:1885:28:977:-48.5527,0,-144.961	0/1:77:54,23:54:1900:23:820:-40.8682,0,-147.851	0/0:112:105,7:105:3759:7:252:0,-17.1821,-321.945	0/0:122:116,6:116:4150:6:207:0,-22.8472,-354.758	0/0:202:191,11:191:6812:11:396:0,-25.8726,-577.709	0/0:126:115,11:115:4115:11:387:0,-3.37294,-335.057	0/1:182:150,32:150:5354:32:1123:-29.6021,0,-423.553	0/0:96:89,7:89:3179:7:252:0,-9.81549,-267.138	0/1:12:9,3:9:324:3:108:-6.42979,0,-25.8935	0/0:116:112,4:112:3996:4:144:0,-21.7865,-346.302	0/1:40:29,11:29:1040:11:392:-23.5306,0,-81.8429	0/1:12:10,2:10:360:2:72:-1.24918,0,-28.5768	0/0:150:134,16:134:4787:16:545:0,-2.00685,-386.755	0/0:58:55,3:55:1932:3:108:0,-7.41759,-164.082	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.6584	0/1:29:26,3:26:923:3:108:-1.33101,0,-74.6569	0/1:70:58,12:58:2071:12:432:-8.68992,0,-162.946	0/1:94:81,13:81:2876:13:464:-13.5919,0,-230.737	0/1:11:9,2:9:315:2:68:-1.49719,0,-25.2303	0/1:277:150,127:150:5375:127:4489:-317.189,0,-396.957	0/0:177:162,15:162:5774:15:515:0,-6.73139,-472.691	0/1:71:58,13:58:2065:13:464:-20.6312,0,-162.436	0/0:95:93,2:93:3303:2:72:0,-21.7809,-288.853	0/1:128:114,14:114:4058:14:496:-5.37311,0,-326.695	0/1:203:178,25:178:6364:25:896:-17.7354,0,-511.65	0/1:52:47,5:47:1649:5:180:-0.856892,0,-130.672	0/0:57:56,1:56:1983:1:36:0,-13.5673,-172.889	0/1:61:34,27:34:1207:27:950:-65.3896,0,-89.3111	0/1:31:24,7:24:845:7:239:-11.1133,0,-66.7205	0/0:84:82,2:82:2918:2:72:0,-18.4628,-255.584	0/0:125:111,14:111:3943:14:496:0,-0.772117,-313.139	0/1:133:87,46:87:3099:46:1622:-78.8341,0,-238.455	0/1:190:153,37:153:5469:37:1320:-61.1749,0,-430.244	0/0:151:148,3:148:5265:3:108:0,-35.3956,-453.724	0/1:152:135,17:135:4780:17:599:-8.38067,0,-376.253	0/1:14:12,2:12:428:2:72:-1.6282,0,-34.2426	0/0:121:112,9:112:3972:9:320:0,-7.35715,-322.728	0/0:150:143,7:143:5086:7:248:0,-22.6838,-434.685	0/0:292:266,26:266:9494:26:909:0,-6.2093,-767.151	0/1:98:57,40:57:2008:40:1428:-98.6686,0,-150.141	0/1:83:63,20:63:2236:20:708:-38.8658,0,-174.975	0/1:76:53,23:53:1900:23:811:-36.9899,0,-148.369	0/1:146:113,33:113:4004:33:1165:-57.1638,0,-316.562	0/1:37:22,15:22:768:15:531:-33.9349,0,-58.2597	0/1:101:69,32:69:2451:32:1119:-70.2436,0,-186.527	0/1:83:66,17:66:2349:17:599:-29.1562,0,-182.489	0/0:51:50,1:50:1777:1:36:0,-11.7633,-152.759	0/1:133:107,26:107:3786:26:920:-25.8609,0,-295.383	0/1:75:55,20:55:1968:20:716:-26.3994,0,-153.614	0/1:161:75,86:75:2683:86:3044:-223.577,0,-192.902	0/1:131:85,46:85:3027:46:1617:-105.417,0,-233.165
chr06	2178378	.	T	A	148681	PASS	AB=0.751017;ABP=3232.04;AC=126;AF=0.670213;AN=188;AO=7717;CIGAR=1X;DP=9381;DPB=9381;DPRA=0;EPP=16760.3;EPPR=3603.31;GTI=25;LEN=1;MEANALT=1.05319;MQM=53.8906;MQMR=44.468;NS=94;NUMALT=1;ODDS=0.204181;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=268984;QR=58919;RO=1658;RPL=7716;RPP=16751.6;RPPR=3594.63;RPR=1;RUN=1;SAF=7716;SAP=16751.6;SAR=1;SRF=1;SRP=3594.63;SRR=1657;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:68:0,68:0:0:68:2391:-215.276,-20.47,0	0/1:84:9,75:9:320:75:2611:-209.642,0,-3.80494	1/1:215:15,200:15:525:200:6975:-577.185,-25.6574,0	0/1:270:32,238:32:1140:238:8229:-654.048,0,-20.9527	1/1:34:2,32:2:72:32:1131:-96.2452,-5.37348,0	1/1:15:1,14:1:36:14:487:-40.2826,-0.924028,0	0/1:63:19,44:19:672:44:1547:-120.543,0,-41.6335	1/1:158:8,150:8:284:150:5186:-444.183,-25.7314,0	0/1:87:20,67:20:720:67:2311:-178.236,0,-25.9681	0/1:108:41,67:41:1444:67:2330:-177.442,0,-75.3672	0/1:60:18,42:18:629:42:1444:-111.142,0,-26.7947	0/1:122:22,100:22:788:100:3493:-277.404,0,-34.3182	0/1:87:29,58:29:1032:58:1995:-150.666,0,-52.595	0/1:91:23,68:23:812:68:2364:-184.589,0,-30.2909	0/1:92:31,61:31:1104:61:2096:-161.089,0,-71.0601	0/1:84:16,68:16:576:68:2378:-188.716,0,-15.5504	0/1:55:17,38:17:608:38:1322:-100.813,0,-38.3974	0/1:39:13,26:13:443:26:916:-69.8055,0,-28.2258	0/1:32:10,22:10:360:22:748:-57.8899,0,-23.049	1/1:170:6,163:6:203:163:5695:-494.012,-32.7214,0	0/1:134:56,78:56:2004:78:2729:-202.893,0,-108.294	1/1:80:1,79:1:36:79:2808:-249.254,-20.4892,0	1/1:132:14,118:14:504:118:4070:-327.546,-3.51103,0	1/1:96:5,90:5:180:90:3171:-271.174,-15.2808,0	1/1:74:1,73:1:36:73:2555:-227.073,-19.7175,0	0/1:254:53,201:53:1896:201:7055:-554.275,0,-94.015	1/1:257:16,241:16:572:241:8419:-695.197,-25.9221,0	0/1:36:11,25:11:384:25:854:-65.3175,0,-23.9868	1/1:366:31,335:31:1108:335:11751:-965.439,-27.2313,0	0/1:138:26,112:26:928:112:3887:-301.304,0,-22.2123	0/1:89:16,73:16:561:73:2543:-201.231,0,-22.9081	0/1:9:5,4:5:180:4:144:-10.5087,0,-12.8551	1/1:10:0,10:0:0:10:356:-32.132,-3.0103,0	0/1:12:2,10:2:72:10:356:-28.4126,0,-3.21539	0/1:6:3,3:3:108:3:104:-7.68025,0,-8.2498	1/1:11:0,11:0:0:11:390:-35.2847,-3.31133,0	0/1:228:72,156:72:2556:156:5427:-419.603,0,-126.317	1/1:106:8,98:8:284:98:3426:-281.504,-6.06023,0	0/1:40:10,30:10:356:30:1047:-81.5264,0,-19.9792	0/1:5:1,4:1:36:4:140:-11.4313,0,-2.08408	0/1:115:14,101:14:496:101:3482:-274.743,0,-10.0678	0/1:32:8,24:8:288:24:843:-66.4151,0,-16.5767	1/1:226:4,222:4:144:222:7747:-685.896,-57.6123,0	0/1:77:28,49:28:992:49:1704:-129.91,0,-50.8117	0/1:72:24,48:24:856:48:1641:-126.08,0,-46.1497	1/1:109:8,101:8:273:101:3520:-298.858,-14.7162,0	1/1:115:6,109:6:216:109:3785:-322.57,-20.5456,0	1/1:172:11,161:11:388:161:5646:-473.791,-17.5572,0	1/1:118:11,107:11:381:107:3740:-302.519,-2.1236,0	0/1:170:32,138:32:1129:138:4820:-379.841,0,-32.9938	1/1:88:7,81:7:252:81:2872:-239.551,-7.40725,0	0/1:12:3,9:3:108:9:316:-25.1665,0,-6.42979	1/1:105:4,101:4:144:101:3560:-307.057,-18.4751,0	0/1:38:12,26:12:432:26:928:-72.3945,0,-27.7287	0/1:9:2,7:2:72:7:240:-18.9819,0,-2.15227	0/1:131:17,114:17:608:114:3985:-318.566,0,-7.65336	1/1:52:3,49:3:108:49:1718:-144.828,-5.61141,0	1/1:9:0,9:0:0:9:320:-29.0564,-2.70927,0	0/1:29:3,26:3:108:26:886:-71.3178,0,-1.33101	0/1:66:12,54:12:428:54:1871:-146.611,0,-9.84334	0/1:91:15,76:15:523:76:2628:-209.332,0,-19.7787	0/1:9:2,7:2:68:7:252:-20.2046,0,-2.09925	0/1:261:126,135:126:4512:135:4776:-348.157,0,-323.706	0/1:165:16,148:16:568:148:5219:-419.596,0,-1.65122	0/1:68:13,55:13:460:55:1939:-152.405,0,-21.1759	1/1:85:2,83:2:68:83:2888:-252.17,-19.1445,0	0/1:117:14,103:14:504:103:3598:-288.676,0,-9.39548	0/1:189:25,164:25:888:164:5771:-462.492,0,-21.2398	1/1:50:4,46:4:144:46:1570:-126.28,-1.77135,0	1/1:52:1,49:1:36:49:1731:-150.646,-11.8178,0	0/1:60:27,33:27:960:33:1107:-80.6344,0,-66.8272	0/1:29:7,22:7:248:22:767:-60.3118,0,-11.9093	1/1:73:2,71:2:72:71:2438:-212.644,-15.1515,0	0/1:114:14,100:14:500:100:3487:-275.132,0,-2.58984	0/1:132:49,83:49:1764:83:2947:-225.144,0,-87.7738	0/1:183:37,146:37:1305:146:5111:-401.012,0,-61.9481	1/1:138:3,135:3:108:135:4663:-402.594,-31.4822,0	0/1:142:17,125:17:600:125:4331:-340.819,0,-11.4841	0/1:12:2,10:2:72:10:334:-26.4915,0,-2.23026	1/1:112:9,103:9:324:103:3571:-287.486,-4.28932,0	1/1:135:7,128:7:248:128:4426:-375.425,-18.084,0	0/1:273:26,247:26:932:247:8611:-688.315,0,-1.56267	0/1:94:40,54:40:1417:54:1857:-137.227,0,-98.8916	0/1:80:19,61:19:680:61:2085:-162.505,0,-37.2503	0/1:75:25,50:25:896:50:1750:-135.176,0,-43.8908	0/1:141:33,108:33:1163:108:3769:-296.933,0,-58.8053	0/1:34:15,19:15:524:19:646:-48.1935,0,-34.6062	0/1:95:34,61:34:1196:61:2087:-156.923,0,-78.9847	0/1:77:17,60:17:604:60:2062:-159.376,0,-31.4132	1/1:50:1,49:1:36:49:1743:-149.138,-11.4623,0	0/1:126:26,100:26:920:100:3495:-270.919,0,-27.6628	0/1:71:21,50:21:752:50:1692:-130.413,0,-29.6449	0/1:153:90,63:90:3209:63:2176:-149.511,0,-240.663	0/1:133:47,85:47:1626:85:2952:-225.784,0,-105.647
chr06	2383234	.	ACCA	GCCG	38380.5	PASS	AB=0.461318;ABP=71.0477;AC=43;AF=0.228723;AN=188;AO=2428;CIGAR=1X2M1X;DP=13172;DPB=13171.8;DPRA=1.05299;EPP=5266.66;EPPR=22995.1;GTI=4;LEN=4;MEANALT=1.6383;MQM=59.9057;MQMR=59.9921;NS=94;NUMALT=1;ODDS=1.48455;PAIRED=0;PAIREDR=0;PAO=2;PQA=72;PQR=0;PRO=0;QA=85509;QR=376876;RO=10692;RPL=2427;RPP=5266.66;RPPR=23021;RPR=1;RUN=1;SAF=0;SAP=5275.35;SAR=2428;SRF=3;SRP=23194.3;SRR=10689;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:20,60:20:715:60:2099:-164.715,0,-40.2356	0/0:153:153,0:153:5407:0:0:0,-46.0576,-486.764	0/1:142:73,69:73:2582:69:2439:-176.658,0,-189.523	0/0:359:358,0:358:12562:0:0:0,-107.769,-1130.08	0/1:117:64,53:64:2269:53:1891:-135.248,0,-169.251	0/1:48:34,13:34:1196:13:447:-26.0503,0,-93.4363	0/0:206:204,0:204:7150:0:0:0,-61.4101,-643.229	0/1:304:176,128:176:6194:128:4497:-313.389,0,-466.052	0/1:142:91,49:91:3178:49:1723:-112.903,0,-243.795	0/1:170:83,86:83:2890:86:3048:-223.317,0,-209.103	0/1:90:38,48:38:1336:48:1703:-127.314,0,-94.2975	0/0:89:88,0:88:3111:0:0:0,-26.4906,-279.857	0/1:68:39,29:39:1390:29:1024:-72.0023,0,-104.929	0/1:124:57,66:57:2003:66:2326:-172.356,0,-143.304	0/0:85:85,0:85:2996:0:0:0,-25.5875,-269.871	0/1:64:31,33:31:1116:33:1159:-85.3497,0,-81.4858	0/0:79:78,0:78:2726:0:0:0,-23.4803,-245.223	0/0:68:68,0:68:2427:0:0:0,-20.47,-218.685	0/0:42:42,0:42:1486:0:0:0,-12.6433,-134.033	0/0:277:277,0:277:9809:0:0:0,-83.3853,-881.661	0/1:292:192,99:192:6785:99:3479:-225.449,0,-522.889	0/0:132:131,0:131:4621:0:0:0,-39.4349,-415.848	0/1:93:50,43:50:1762:43:1517:-108.825,0,-130.868	0/1:245:125,114:125:4424:114:4022:-289.87,0,-326.046	0/1:125:69,56:69:2437:56:1998:-142.463,0,-181.956	0/0:606:604,1:604:21285:1:30:0,-179.379,-1912.17	0/0:385:385,0:385:13622:0:0:0,-115.897,-1225.78	0/0:59:58,0:58:2062:0:0:0,-17.4597,-185.49	0/1:281:174,105:174:6141:105:3685:-247.555,0,-468.497	0/1:256:158,97:158:5582:97:3368:-226.207,0,-425.387	0/0:192:192,0:192:6721:0:0:0,-57.7978,-604.976	0/1:9:7,2:7:252:2:58:-2.79903,0,-20.3197	0/0:17:17,0:17:609:0:0:0,-5.11751,-55.1426	0/1:5:3,2:3:107:2:71:-5.23691,0,-8.47702	0/1:12:7,5:7:252:5:172:-12.205,0,-19.4166	0/0:8:8,0:8:287:0:0:0,-2.40824,-26.1765	0/1:228:125,103:125:4425:103:3631:-258.363,0,-329.788	0/0:330:330,0:330:11578:0:0:0,-99.3399,-1041.91	0/0:60:60,0:60:2100:0:0:0,-18.0618,-189.267	0/0:4:4,0:4:138:0:0:0,-1.20412,-12.7598	0/0:177:176,0:176:6228:0:0:0,-52.9813,-560.412	0/0:41:41,0:41:1473:0:0:0,-12.3422,-132.866	0/1:178:91,87:91:3168:87:3083:-224.117,0,-231.76	0/1:115:46,67:46:1605:67:2356:-177.764,0,-110.36	0/1:75:37,38:37:1269:38:1364:-100.484,0,-91.9283	0/1:224:101,122:101:3580:122:4257:-315.95,0,-255.048	0/1:158:87,70:87:3063:70:2476:-175.532,0,-228.337	0/0:253:252,0:252:8895:0:0:0,-75.8596,-800.184	0/0:195:195,0:195:6829:0:0:0,-58.7008,-614.69	0/1:188:111,76:111:3947:76:2707:-187.222,0,-298.77	0/1:170:91,79:91:3239:79:2766:-198.005,0,-240.558	0/1:15:5,10:5:174:10:351:-27.4122,0,-11.4858	0/0:160:159,0:159:5633:0:0:0,-47.8638,-506.774	0/0:31:31,0:31:1089:0:0:0,-9.33193,-98.3175	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/1:168:98,70:98:3495:70:2445:-169.716,0,-264.189	0/0:104:103,0:103:3588:0:0:0,-31.0061,-322.77	0/1:11:9,2:9:318:2:64:-2.76722,0,-25.649	0/1:26:20,6:20:704:6:204:-10.8655,0,-55.8558	0/1:67:35,31:35:1255:31:1087:-77.9101,0,-93.0275	0/0:123:123,0:123:4352:0:0:0,-37.0267,-391.858	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:342:341,1:341:11929:1:35:0,-99.4536,-1069.99	0/0:345:335,10:335:11831:10:353:0,-71.7468,-1032.55	0/0:125:125,0:125:4371:0:0:0,-37.6287,-393.569	0/0:97:97,0:97:3454:0:0:0,-29.1999,-311.074	0/0:297:297,0:297:10405:0:0:0,-89.4059,-936.388	0/0:172:169,0:169:5975:0:0:0,-50.8741,-537.498	0/0:35:35,0:35:1251:0:0:0,-10.536,-112.895	0/0:93:93,0:93:3274:0:0:0,-27.9958,-294.881	0/0:116:116,0:116:4115:0:0:0,-34.9195,-370.536	0/1:28:14,14:14:471:14:491:-36.092,0,-34.2798	0/0:136:136,0:136:4766:0:0:0,-40.9401,-429.102	0/1:95:40,54:40:1407:54:1873:-140.189,0,-98.2694	0/1:415:196,216:196:6848:216:7610:-560.58,0,-492.037	0/0:173:173,0:173:6117:0:0:0,-52.0782,-550.635	0/0:102:102,0:102:3602:0:0:0,-30.7051,-324.389	0/0:170:170,0:170:6017:0:0:0,-51.1751,-541.64	0/1:17:7,10:7:249:10:359:-27.5361,0,-17.6381	0/0:142:140,0:140:4936:0:0:0,-42.1442,-444.034	0/0:155:155,0:155:5466:0:0:0,-46.6596,-492.074	0/0:291:291,0:291:10276:0:0:0,-87.5997,-924.779	0/0:123:123,0:123:4354:0:0:0,-37.0267,-392.037	0/0:78:78,0:78:2788:0:0:0,-23.4803,-251.159	0/1:127:73,54:73:2555:54:1936:-136.286,0,-191.967	0/0:228:224,1:224:7909:1:36:0,-64.4933,-708.245	0/1:49:26,23:26:920:23:812:-58.2786,0,-68.3655	0/0:94:93,0:93:3264:0:0:0,-27.9958,-293.623	0/0:82:81,0:81:2795:0:0:0,-24.3834,-251.429	0/0:45:45,0:45:1583:0:0:0,-13.5463,-142.758	0/1:110:52,58:52:1806:58:2045:-151.208,0,-129.705	0/1:88:27,61:27:939:61:2160:-168.177,0,-58.3302	0/0:147:147,0:147:5212:0:0:0,-44.2514,-469.222	0/0:114:114,0:114:4066:0:0:0,-34.3174,-366.128
chr06	2580704	.	GTCTGC	AACTGT,AACTGC	146200	PASS	AB=0.554602,0.439548;ABP=69.4079,84.3982;AC=144,44;AF=0.765957,0.234043;AN=188;AO=5762,1142;CIGAR=2X3M1X,2X4M;DP=6951;DPB=6951.17;DPRA=0,0.776316;EPP=12515,2482.83;EPPR=7.35324;GTI=5;LEN=6,2;MEANALT=2.02128,2.31481;MQM=50.0781,58.9939;MQMR=60;NS=94;NUMALT=2;ODDS=0.263424;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=202833,40405;QR=72;RO=2;RPL=5762,1142;RPP=12515,2482.83;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=0,0;SAP=12515,2482.83;SAR=5762,1142;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:39:0,24,15:0:0:24,15:854,540:-112.502,-44.4193,-37.1945,-68.4384,0,-63.923	1/1:60:0,60,0:0:0:60,0:2144,0:-191.895,-18.0618,0,-191.895,-18.0618,-191.895	1/2:80:0,50,30:0:0:50,30:1772,1076:-230.354,-88.0743,-73.0228,-142.635,0,-133.604	1/1:140:0,139,0:0:0:139,0:4919,0:-440.249,-41.8432,0,-440.249,-41.8432,-440.249	1/2:40:0,23,17:0:0:23,17:807,599:-113.58,-49.1151,-42.1914,-64.8138,0,-59.6963	1/2:35:0,20,15:0:0:20,15:717,535:-101.646,-43.6971,-37.6765,-58.3036,0,-53.7882	1/1:81:0,80,0:0:0:80,0:2824,0:-253.321,-24.0824,0,-253.321,-24.0824,-253.321	1/2:59:0,25,33:0:0:25,33:899,1146:-165.673,-93.149,-85.6232,-72.5503,0,-62.6163	1/2:78:0,49,29:0:0:49,29:1731,1040:-224.568,-85.1276,-70.3772,-139.796,0,-131.066	1/2:49:0,22,25:0:0:22,25:772,878:-133.898,-71.4426,-64.8199,-62.4594,0,-54.9337	1/2:59:0,30,28:0:0:30,28:1070,993:-167.973,-80.8818,-71.8509,-87.1184,0,-78.6896	1/1:88:0,86,0:0:0:86,0:3039,0:-271.905,-25.8886,0,-271.905,-25.8886,-271.905	1/2:77:0,43,34:0:0:43,34:1532,1201:-221.267,-98.1267,-85.1824,-123.493,0,-113.258	1/2:71:0,40,28:0:0:40,28:1425,977:-194.839,-79.3968,-67.3556,-115.44,0,-107.012	1/1:67:0,67,0:0:0:67,0:2384,0:-212.751,-20.169,0,-212.751,-20.169,-212.751	1/2:49:0,26,23:0:0:26,23:905,815:-139.8,-66.7405,-58.9137,-73.4094,0,-66.4857	1/1:25:0,24,0:0:0:24,0:844,0:-75.4059,-7.22472,0,-75.4059,-7.22472,-75.4059	1/1:30:0,30,0:0:0:30,0:1053,0:-94.5225,-9.0309,0,-94.5225,-9.0309,-94.5225	1/1:41:0,41,0:0:0:41,0:1440,0:-128.573,-12.3422,0,-128.573,-12.3422,-128.573	1/1:123:0,123,0:0:0:123,0:4353,0:-390.008,-37.0267,0,-390.008,-37.0267,-390.008	1/2:88:0,45,43:0:0:45,43:1579,1509:-251.033,-123.086,-109.54,-128.297,0,-115.353	1/1:93:0,93,0:0:0:93,0:3263,0:-289.324,-27.9958,0,-289.324,-27.9958,-289.324	1/2:99:0,45,54:0:0:45,54:1578,1914:-284.021,-156.261,-142.715,-128.111,0,-111.856	1/2:51:1,18,32:1:36:18,32:638,1135:-139.988,-89.4417,-86.9607,-47.9001,0,-41.2052	1/2:60:0,34,26:0:0:34,26:1198,932:-173.162,-76.3646,-66.1295,-97.1524,0,-89.3256	1/1:221:0,221,0:0:0:221,0:7736,0:-690.131,-66.5276,0,-690.131,-66.5276,-690.131	1/1:168:0,165,0:0:0:165,0:5835,0:-521.353,-49.67,0,-521.353,-49.67,-521.353	1/1:46:0,43,3:0:0:43,3:1528,108:-136.528,-12.9443,0,-127.724,-3.78065,-126.821	1/2:180:0,109,70:0:0:109,70:3833,2459:-506.564,-200.011,-167.198,-306.543,0,-285.471	1/2:106:0,51,55:0:0:51,55:1784,1958:-303.497,-159.436,-144.083,-144.412,0,-127.856	1/1:94:0,92,0:0:0:92,0:3241,0:-291.004,-27.6948,0,-291.004,-27.6948,-291.004	1/2:5:0,4,1:0:0:4,1:140,36:-14.6516,-3.29724,-2.09312,-11.712,0,-11.411	1/1:14:0,14,0:0:0:14,0:488,0:-44.12,-4.21442,0,-44.12,-4.21442,-44.12	1/2:7:0,4,3:0:0:4,3:139,108:-20.2515,-9.17208,-7.96796,-11.4314,0,-10.5283	1/2:8:0,5,3:0:0:5,3:175,108:-23.3249,-9.17208,-7.66693,-14.5082,0,-13.6051	1/1:14:0,14,0:0:0:14,0:485,0:-43.6984,-4.21442,0,-43.6984,-4.21442,-43.6984	1/2:156:0,89,66:0:0:89,66:3121,2374:-444.995,-193.356,-166.564,-251.64,0,-231.772	1/1:159:0,156,0:0:0:156,0:5447,0:-485.787,-46.9607,0,-485.787,-46.9607,-485.787	1/1:62:0,61,0:0:0:61,0:2145,0:-191.422,-18.3628,0,-191.422,-18.3628,-191.422	1/2:4:0,3,1:0:0:3,1:107,28:-11.2384,-2.49842,-1.59533,-9.03868,0,-8.73765	1/1:112:0,111,1:0:0:111,1:3920,36:-350.502,-33.4143,0,-347.565,-30.1171,-347.264	1/1:29:0,29,0:0:0:29,0:1034,0:-91.7166,-8.72987,0,-91.7166,-8.72987,-91.7166	1/2:91:0,62,29:0:0:62,29:2171,1022:-258.65,-83.4332,-64.7694,-175.567,0,-166.837	1/2:39:0,22,17:0:0:22,17:781,597:-112.275,-48.8509,-42.2283,-63.7759,0,-58.6584	1/2:48:0,29,18:0:0:29,18:1025,637:-134.986,-51.9329,-43.203,-83.1319,0,-77.7134	1/2:67:0,36,31:0:0:36,31:1262,1112:-192.949,-91.0578,-80.2207,-102.245,0,-92.9128	1/2:87:0,51,36:0:0:51,36:1771,1248:-243.807,-101.65,-86.2976,-142.502,0,-131.665	1/1:125:0,125,0:0:0:125,0:4373,0:-390.697,-37.6288,0,-390.697,-37.6288,-390.697	1/1:95:0,95,0:0:0:95,0:3324,0:-298.044,-28.5979,0,-298.044,-28.5979,-298.044	1/2:71:0,32,39:0:0:32,39:1115,1400:-204.392,-114.386,-104.753,-90.3574,0,-78.6172	1/2:102:0,61,41:0:0:61,41:2172,1445:-293.4,-117.995,-99.6318,-175.758,0,-163.416	1/2:14:0,7,7:0:0:7,7:240,250:-40.1813,-20.7347,-18.6275,-19.7961,0,-17.6889	1/1:101:0,101,0:0:0:101,0:3580,0:-318.385,-30.404,0,-318.385,-30.404,-318.385	1/1:58:0,58,0:0:0:58,0:2056,0:-183.795,-17.4597,0,-183.795,-17.4597,-183.795	1/2:9:0,6,3:0:0:6,3:206,108:-25.5195,-9.17208,-7.3659,-16.6994,0,-15.7963	1/2:120:0,71,48:0:0:71,48:2468,1690:-336.82,-137.24,-115.867,-199.576,0,-185.126	1/1:34:0,34,0:0:0:34,0:1202,0:-107.625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chr06	2595245	.	CC	TA	240737	PASS	AB=0.424418;ABP=328.962;AC=143;AF=0.760638;AN=188;AO=11466;CIGAR=2X;DP=15279;DPB=15279;DPRA=20.5255;EPP=24901.1;EPPR=8254.61;GTI=1;LEN=2;MEANALT=1.13978;MQM=59.4402;MQMR=59.9276;NS=94;NUMALT=1;ODDS=0.9323;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=405908;QR=134436;RO=3800;RPL=0;RPP=24901.1;RPPR=8254.61;RPR=11466;RUN=1;SAF=11466;SAP=24901.1;SAR=0;SRF=3800;SRP=8254.61;SRR=0;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:26,33:26:913:33:1135:-84.6422,0,-64.724	1/1:218:0,217:0:0:217:7664:-689.327,-65.3235,0	0/1:234:176,58:176:6260:58:2059:-115.114,0,-493.055	1/1:261:0,261:0:0:261:9227:-828.57,-78.5688,0	0/1:135:74,61:74:2643:61:2153:-153.346,0,-197.477	0/1:93:48,45:48:1698:45:1547:-111.402,0,-125.108	1/1:124:0,123:0:0:123:4369:-392.978,-37.0267,0	0/1:264:158,106:158:5603:106:3735:-256.696,0,-424.623	0/1:138:89,49:89:3186:49:1690:-110.818,0,-245.265	0/1:216:127,89:127:4485:89:3143:-217.4,0,-338.781	0/1:103:56,47:56:1964:47:1690:-121.374,0,-146.025	1/1:93:0,93:0:0:93:3310:-298.107,-27.9958,0	0/1:86:49,37:49:1725:37:1313:-92.5414,0,-129.643	0/1:114:37,77:37:1328:77:2711:-209.843,0,-85.505	1/1:104:0,104:0:0:104:3682:-331.559,-31.3071,0	0/1:102:64,37:64:2270:37:1310:-87.3223,0,-173.836	1/1:131:0,130:0:0:130:4605:-412.481,-39.1339,0	1/1:83:0,83:0:0:83:2961:-265.83,-24.9855,0	1/1:44:0,44:0:0:44:1563:-140.616,-13.2453,0	1/1:249:0,249:0:0:249:8752:-786.996,-74.9565,0	0/1:247:152,95:152:5304:95:3402:-231.986,0,-403.143	1/1:187:0,187:0:0:187:6627:-596.374,-56.2926,0	0/1:201:106,95:106:3745:95:3341:-239.682,0,-276.732	0/1:208:100,108:100:3551:108:3825:-281.694,0,-256.994	0/1:143:93,50:93:3286:50:1788:-118.1,0,-252.912	1/1:429:0,429:0:0:429:15186:-1366.33,-129.142,0	1/1:270:0,270:0:0:270:9614:-864.422,-81.2781,0	1/1:67:0,67:0:0:67:2386:-214.918,-20.169,0	0/1:615:396,218:396:14047:218:7712:-508.839,0,-1078.81	0/1:271:108,163:108:3801:163:5746:-435.545,0,-260.711	1/1:279:2,277:2:72:277:9682:-862.909,-77.1506,0	0/1:9:7,2:7:252:2:61:-3.05844,0,-20.3197	1/1:5:0,5:0:0:5:161:-14.8069,-1.50515,0	0/1:16:12,4:12:426:4:142:-8.31273,0,-33.8612	0/1:8:6,2:6:214:2:72:-4.42848,0,-17.1995	1/1:13:0,13:0:0:13:460:-41.7348,-3.91339,0	0/1:343:185,158:185:6543:158:5640:-404.381,0,-485.699	1/1:339:0,339:0:0:339:11949:-1074.55,-102.049,0	1/1:83:0,83:0:0:83:2951:-265.81,-24.9855,0	0/1:11:8,3:8:288:3:108:-6.74066,0,-22.9561	1/1:224:0,223:0:0:223:7904:-710.775,-67.1297,0	1/1:31:0,31:0:0:31:1093:-98.6101,-9.33193,0	0/1:292:178,113:178:6215:113:3999:-272.045,0,-471.582	0/1:159:86,73:86:3036:73:2597:-185.607,0,-225.605	0/1:114:63,51:63:2214:51:1823:-130.023,0,-165.2	0/1:133:80,52:80:2801:52:1798:-122.107,0,-212.342	0/1:223:109,114:109:3898:114:3978:-291.072,0,-283.881	1/1:276:0,275:0:0:275:9764:-878.27,-82.7833,0	1/1:186:0,186:0:0:186:6512:-585.275,-55.9916,0	0/1:279:168,111:168:6005:111:3965:-273.008,0,-456.566	0/1:278:158,119:158:5531:119:4236:-297.595,0,-414.105	0/1:20:16,4:16:565:4:144:-7.27004,0,-45.159	1/1:244:0,244:0:0:244:8673:-779.629,-73.4513,0	1/1:75:0,75:0:0:75:2655:-239.193,-22.5773,0	0/1:25:19,6:19:669:6:203:-11.0751,0,-53.0093	0/1:285:203,82:203:7233:82:2914:-176.588,0,-565.228	1/1:103:0,103:0:0:103:3647:-327.079,-31.0061,0	0/1:23:19,4:19:684:4:144:-6.38993,0,-54.9666	0/1:41:33,8:33:1169:8:277:-12.9228,0,-93.1738	0/1:135:61,74:61:2149:74:2636:-196.823,0,-153.036	1/1:181:2,179:2:72:179:6383:-567.559,-47.6497,0	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	1/1:314:0,314:0:0:314:11141:-1002.54,-94.5234,0	1/1:337:0,337:0:0:337:11919:-1072.49,-101.447,0	1/1:108:0,108:0:0:108:3850:-346.641,-32.5112,0	1/1:162:0,162:0:0:162:5704:-512.181,-48.7669,0	1/1:279:4,274:4:144:274:9712:-860.575,-70.6447,0	1/1:173:1,172:1:36:172:6080:-542.364,-48.4799,0	1/1:34:0,34:0:0:34:1206:-108.845,-10.235,0	1/1:122:0,122:0:0:122:4302:-387.313,-36.7257,0	1/1:163:0,163:0:0:163:5789:-521.059,-49.0679,0	0/1:63:31,32:31:1076:32:1131:-83.1325,0,-78.1802	1/1:131:1,130:1:36:130:4561:-406.073,-35.8367,0	0/1:86:48,38:48:1714:38:1324:-93.5554,0,-128.658	0/1:280:141,139:141:5012:139:4917:-358.357,0,-366.934	1/1:311:0,311:0:0:311:11077:-996.44,-93.6203,0	1/1:220:0,220:0:0:220:7787:-699.374,-66.2266,0	1/1:238:1,236:1:36:236:8406:-752.54,-68.1057,0	0/1:14:11,3:11:392:3:97:-4.83557,0,-31.4056	1/1:195:2,192:2:72:192:6850:-609.191,-51.8564,0	1/1:175:3,172:3:108:172:6114:-540.131,-42.6051,0	1/1:253:0,253:0:0:253:8974:-807.538,-76.1606,0	1/1:196:0,196:0:0:196:6937:-624.307,-59.0019,0	1/1:118:0,118:0:0:118:4203:-378.424,-35.5215,0	0/1:155:75,80:75:2626:80:2805:-205.471,0,-189.926	1/1:242:0,242:0:0:242:8555:-769.008,-72.8493,0	0/1:78:41,37:41:1452:37:1324:-95.9734,0,-107.003	1/1:112:0,112:0:0:112:3987:-358.909,-33.7154,0	1/1:108:0,108:0:0:108:3833:-345.117,-32.5112,0	1/1:62:0,62:0:0:62:2207:-198.801,-18.6639,0	0/1:133:71,62:71:2528:62:2179:-156.31,0,-187.732	0/1:137:88,49:88:3075:49:1732:-114.642,0,-235.735	1/1:216:0,216:0:0:216:7617:-685.531,-65.0225,0	1/1:134:0,134:0:0:134:4771:-429.484,-40.338,0
chr06	2714423	.	G	T	56922	PASS	AB=0.397893;ABP=630.486;AC=44;AF=0.234043;AN=188;AO=2774;CIGAR=1X;DP=20157;DPB=20157;DPRA=0.966149;EPP=6026.67;EPPR=37723.7;GTI=6;LEN=1;MEANALT=1.12727;MQM=59.9798;MQMR=59.981;NS=94;NUMALT=1;ODDS=3.74597;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99091;QR=616435;RO=17371;RPL=1555;RPP=91.3847;RPPR=1298.31;RPR=1219;RUN=1;SAF=1555;SAP=91.3847;SAR=1219;SRF=10295;SRP=1298.31;SRR=7076;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:35,33:35:1256:33:1184:-86.3983,0,-92.8752	0/0:205:205,0:205:7328:0:0:0,-61.7111,-659.568	0/1:165:115,50:115:4079:50:1792:-111.893,0,-317.627	0/0:637:635,1:635:22497:1:36:0,-188.217,-2020.56	0/1:110:73,37:73:2598:37:1311:-85.1768,0,-200.955	0/1:45:25,20:25:883:20:711:-50.7693,0,-66.2411	0/0:342:340,1:340:12023:1:36:0,-99.4128,-1078.34	0/1:224:142,82:142:5056:82:2920:-195.603,0,-387.755	0/1:111:61,50:61:2162:50:1788:-127.788,0,-161.432	0/1:200:125,75:125:4455:75:2688:-181.959,0,-340.916	0/1:128:71,57:71:2493:57:2036:-144.98,0,-186.091	0/0:64:64,0:64:2274:0:0:0,-19.2659,-204.921	0/1:71:34,37:34:1211:37:1319:-97.638,0,-87.9224	0/1:147:85,62:85:3027:62:2227:-156.443,0,-228.41	0/0:171:171,0:171:6094:0:0:0,-51.4761,-548.563	0/1:99:60,37:60:2105:37:1319:-89.4516,0,-160.159	0/0:56:56,0:56:1987:0:0:0,-16.8577,-179.096	0/0:71:71,0:71:2507:0:0:0,-21.3731,-225.881	0/0:33:33,0:33:1166:0:0:0,-9.93399,-105.246	0/0:575:573,2:573:20294:2:72:0,-166.256,-1819.15	0/1:335:228,107:228:8122:107:3808:-242.072,0,-630.156	0/0:260:259,0:259:9223:0:0:0,-77.9668,-829.684	0/1:235:143,92:143:5045:92:3287:-225.307,0,-383.457	0/1:276:155,121:155:5479:121:4324:-306.253,0,-410.157	0/1:175:99,76:99:3521:76:2702:-190.743,0,-264.42	0/0:905:902,3:902:31862:3:104:0,-262.729,-2856.93	0/0:581:581,0:581:20725:0:0:0,-174.898,-1862.93	0/0:91:91,0:91:3243:0:0:0,-27.3937,-292.092	0/1:571:338,233:338:11974:233:8351:-579.693,0,-905.635	0/1:245:126,119:126:4496:119:4255:-309.366,0,-331.034	0/0:317:317,0:317:11246:0:0:0,-95.4265,-1012.03	0/1:8:2,6:2:63:6:216:-17.3823,0,-3.57491	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:419:230,189:230:8118:189:6750:-481.442,0,-604.515	0/0:499:498,0:498:17711:0:0:0,-149.913,-1593.13	0/0:70:70,0:70:2485:0:0:0,-21.0721,-223.902	0/1:7:4,3:4:135:3:108:-7.96796,0,-10.3753	0/0:448:448,0:448:15983:0:0:0,-134.861,-1438.16	0/0:78:78,0:78:2783:0:0:0,-23.4803,-250.711	0/1:321:196,124:196:6942:124:4418:-301.1,0,-528.078	0/1:162:82,79:82:2893:79:2813:-204.583,0,-211.781	0/1:126:64,62:64:2259:62:2210:-161.234,0,-165.643	0/1:246:134,111:134:4760:111:3963:-282.789,0,-354.486	0/1:180:139,41:139:4974:41:1467:-78.1399,0,-393.622	0/0:452:451,0:451:16027:0:0:0,-135.765,-1441.8	0/0:329:329,0:329:11678:0:0:0,-99.0389,-1050.9	0/1:319:225,94:225:7989:94:3348:-205.507,0,-623.006	0/1:291:187,104:187:6647:104:3728:-248.058,0,-510.712	0/1:14:9,5:9:324:5:176:-11.9706,0,-25.2914	0/0:243:243,0:243:8624:0:0:0,-73.1503,-776.161	0/0:144:144,0:144:5057:0:0:0,-43.3483,-455.19	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/1:319:210,108:210:7430:108:3851:-250.699,0,-572.666	0/0:126:125,1:125:4405:1:36:0,-34.3315,-393.025	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	0/1:49:33,16:33:1169:16:576:-37.4245,0,-90.7648	0/1:206:133,73:133:4704:73:2620:-174.035,0,-361.511	0/0:197:197,0:197:6968:0:0:0,-59.3029,-627.194	0/1:16:7,9:7:252:9:311:-23.5072,0,-18.2125	0/0:600:600,0:600:21306:0:0:0,-180.618,-1917.02	0/0:500:498,2:498:17742:2:72:0,-143.678,-1589.56	0/0:150:150,0:150:5351:0:0:0,-45.1545,-481.724	0/0:273:273,0:273:9737:0:0:0,-82.1812,-876.279	0/0:414:412,2:412:14605:2:72:0,-117.79,-1307.37	0/0:272:271,1:271:9654:1:36:0,-78.2819,-865.217	0/0:59:59,0:59:2112:0:0:0,-17.7608,-190.349	0/0:102:102,0:102:3639:0:0:0,-30.7051,-327.715	0/0:171:169,2:169:5964:2:72:0,-44.6394,-530.019	0/1:39:19,20:19:672:20:720:-53.3886,0,-49.0667	0/0:187:187,0:187:6579:0:0:0,-56.2926,-592.196	0/1:114:87,27:87:3116:27:955:-51.9466,0,-246.349	0/1:317:204,113:204:7233:113:4023:-266.831,0,-555.602	0/0:599:599,0:599:21273:0:0:0,-180.317,-1914.04	0/0:135:135,0:135:4779:0:0:0,-40.639,-430.27	0/0:195:194,0:194:6888:0:0:0,-58.3998,-619.631	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/0:362:362,0:362:12875:0:0:0,-108.973,-1158.57	0/0:152:152,0:152:5398:0:0:0,-45.7566,-485.952	0/0:569:569,0:569:20216:0:0:0,-171.286,-1818.97	0/0:213:213,0:213:7544:0:0:0,-64.1194,-677.986	0/0:152:152,0:152:5344:0:0:0,-45.7566,-481.097	0/1:163:87,76:87:3103:76:2712:-195.256,0,-230.43	0/0:304:303,1:303:10633:1:36:0,-87.9148,-953.298	0/1:56:36,20:36:1254:20:720:-48.2711,0,-96.3029	0/0:62:62,0:62:2181:0:0:0,-18.6639,-196.555	0/0:61:61,0:61:2153:0:0:0,-18.3628,-194.036	0/0:104:104,0:104:3712:0:0:0,-31.3071,-334.283	0/1:181:103,78:103:3645:78:2796:-197.394,0,-273.641	0/1:124:41,83:41:1464:83:2976:-230.745,0,-94.7283	0/0:450:449,1:449:15973:1:32:0,-132.264,-1434.04	0/0:211:211,0:211:7467:0:0:0,-63.5173,-672.083
chr06	2765495	.	TTCCGTA	CTCCGCC,CTCTGTC	534531	PASS	AB=0.530615,0.462809;ABP=58.7206,85.2238;AC=154,34;AF=0.819149,0.180851;AN=188;AO=16874,3260;CIGAR=1X4M2X,1X2M1X2M1X;DP=20303;DPB=20313.4;DPRA=0,1.27063;EPP=36644.4,7082.01;EPPR=5.18177;GTI=0;LEN=7,7;MEANALT=3.20213,3.63793;MQM=57.2082,59.2785;MQMR=60;NS=94;NUMALT=2;ODDS=27.7528;PAIRED=0,0;PAIREDR=0;PAO=37,39;PQA=1260.5,1318.5;PQR=0;PRO=8;QA=584957,114145;QR=34;RO=1;RPL=5498,1402;RPP=4449.28,141.516;RPPR=5.18177;RPR=11376,1858;RUN=1,1;SAF=5498,1402;SAP=4449.28,141.516;SAR=11376,1858;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:102:0,50,52:0:0:50,52:1764,1798:-289.857,-146.386,-131.335,-143.762,0,-128.108	1/1:135:0,134,1:0:0:134,1:4671,30:-419.999,-40.338,0,-418.029,-38.1152,-417.728	1/2:180:0,99,79:0:0:99,79:3446,2747:-502.755,-223.312,-193.51,-279.432,0,-255.65	1/1:350:0,345,0:0:0:345,0:12020,0:-1080.35,-103.855,0,-1080.35,-103.855,-1080.35	1/2:92:0,59,33:0:0:59,33:2034,1164:-260.214,-95.0882,-77.3274,-165.475,0,-155.541	1/2:87:0,46,41:0:0:46,41:1604,1428:-246.824,-116.435,-102.587,-130.737,0,-118.395	1/1:149:0,148,0:0:0:148,0:5120,0:-459.858,-44.5524,0,-459.858,-44.5524,-459.858	1/2:259:0,117,138:0:0:117,138:4035,4819:-719.249,-391.633,-356.412,-327.659,0,-286.117	1/2:258:0,131,126:0:0:131,126:4408,4403:-715.093,-358.179,-318.744,-356.966,0,-319.037	1/2:140:0,63,76:0:0:63,76:2185,2635:-390.97,-213.717,-194.752,-177.273,0,-154.395	1/2:266:0,208,57:0:0:208,57:7213,2013:-749.331,-163.609,-100.994,-585.605,0,-568.447	1/1:193:0,192,0:0:0:192,0:6577,0:-591.143,-57.7978,0,-591.143,-57.7978,-591.143	1/2:171:0,87,84:0:0:87,84:3027,2921:-483.593,-237.753,-211.563,-246.128,0,-220.842	1/2:137:0,65,72:0:0:65,72:2218,2547:-387.408,-207.553,-187.987,-180.084,0,-158.41	1/1:139:0,139,0:0:0:139,0:4732,0:-425.583,-41.8432,0,-425.583,-41.8432,-425.583	1/2:145:0,69,75:0:0:69,75:2356,2631:-405.128,-214.14,-193.369,-191.013,0,-168.436	1/1:88:0,87,0:0:0:87,0:2938,0:-264.065,-26.1896,0,-264.065,-26.1896,-264.065	1/1:69:0,67,0:0:0:67,0:2236,0:-201.067,-20.169,0,-201.067,-20.169,-201.067	1/1:224:0,221,0:0:0:221,0:7625,0:-685.275,-66.5276,0,-685.275,-66.5276,-685.275	1/1:283:0,279,1:0:0:279,1:9795,35:-880.598,-83.9874,0,-877.75,-81.1335,-877.449	1/2:288:0,145,139:0:0:145,139:5041,4834:-802.456,-392.825,-349.176,-409.635,0,-367.792	1/1:172:0,172,0:0:0:172,0:5962,0:-536.148,-51.7772,0,-536.148,-51.7772,-536.148	1/2:165:0,99,66:0:0:99,66:3449,2312:-468.344,-188.425,-158.623,-280.268,0,-260.4	1/2:79:0,48,31:0:0:48,31:1697,1082:-226.475,-88.3545,-73.9051,-138.471,0,-129.139	1/2:146:0,91,55:0:0:91,55:3168,1954:-416.297,-159.265,-131.871,-257.208,0,-240.651	1/1:394:0,388,1:0:0:388,1:13347,23:-1199.83,-116.8,0,-1198.06,-115.056,-1197.76	1/1:422:0,420,0:0:0:420,0:14556,0:-1307.98,-126.433,0,-1307.98,-126.433,-1307.98	1/1:77:0,75,0:0:0:75,0:2628,0:-236.134,-22.5773,0,-236.134,-22.5773,-236.134	1/2:324:0,163,158:0:0:163,158:5624,5548:-908.087,-451.453,-402.385,-456.672,0,-409.11	1/2:160:0,95,65:0:0:95,65:3302,2289:-454.957,-186.704,-158.106,-268.604,0,-249.037	1/1:160:0,156,4:0:0:156,4:5381,144:-483.714,-46.9607,0,-471.965,-34.852,-470.761	1/1:319:0,313,6:0:0:313,6:10958,210:-984.736,-94.2224,0,-967.65,-76.7865,-965.844	1/1:490:0,482,2:0:0:482,2:16969,72:-1524.45,-145.096,0,-1518.58,-139.207,-1517.97	1/1:219:0,216,0:0:0:216,0:7535,0:-676.848,-65.0225,0,-676.848,-65.0225,-676.848	1/1:402:0,392,5:0:0:392,5:13717,169:-1232.51,-118.004,0,-1218.81,-104.309,-1217.3	1/1:524:0,519,0:0:0:519,0:17999,0:-1617.36,-156.235,0,-1617.36,-156.235,-1617.36	1/2:416:0,210,203:0:0:210,203:7278,7118:-1170.27,-579.159,-515.943,-591.117,0,-530.008	1/1:146:0,142,0:0:0:142,0:4926,0:-442.916,-42.7463,0,-442.916,-42.7463,-442.916	1/1:430:0,424,0:0:0:424,0:14592,0:-1311.32,-127.637,0,-1311.32,-127.637,-1311.32	1/1:127:0,125,0:0:0:125,0:4328,0:-389.095,-37.6288,0,-389.095,-37.6288,-389.095	1/1:227:0,227,0:0:0:227,0:7908,0:-711.353,-68.3338,0,-711.353,-68.3338,-711.353	1/1:238:0,237,0:0:0:237,0:8244,0:-740.372,-71.3441,0,-740.372,-71.3441,-740.372	1/2:176:0,107,68:0:0:107,68:3674,2374:-491.147,-192.985,-160.774,-298.149,0,-277.679	1/2:132:0,49,83:0:0:49,83:1694,2907:-374.357,-236.828,-222.077,-137.877,0,-112.891	1/2:126:1,57,68:1:34:57,68:1978,2397:-352.93,-192.549,-178.148,-158.067,0,-140.355	1/2:114:0,60,54:0:0:60,54:2097,1882:-323.529,-153.313,-135.251,-170.564,0,-154.309	1/2:151:0,78,73:0:0:78,73:2728,2525:-427.32,-205.518,-182.038,-222.149,0,-200.174	1/1:267:0,263,3:0:0:263,3:9022,104:-810.797,-79.1709,0,-802.344,-70.6977,-801.441	1/1:149:0,149,0:0:0:149,0:5070,0:-455.576,-44.8535,0,-455.576,-44.8535,-455.576	1/2:165:0,91,73:0:0:91,73:3111,2549:-459.096,-206.864,-179.47,-251.923,0,-229.947	1/2:188:0,88,100:0:0:88,100:3059,3477:-531.539,-282.964,-256.474,-248.922,0,-218.819	1/1:326:0,312,11:0:0:312,11:10943,375:-982.719,-93.9214,0,-952.295,-63.4961,-948.984	1/1:139:0,138,0:0:0:138,0:4766,0:-428.581,-41.5421,0,-428.581,-41.5421,-428.581	1/1:109:0,108,0:0:0:108,0:3754,0:-337.564,-32.5112,0,-337.564,-32.5112,-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chr06	2765516	.	G	A	254639	PASS	AB=0.532845;ABP=38.8137;AC=155;AF=0.824468;AN=188;AO=11552;CIGAR=1X;DP=13408;DPB=13408;DPRA=0;EPP=24819.3;EPPR=3970.46;GTI=1;LEN=1;MEANALT=1.03191;MQM=56.2934;MQMR=59.718;NS=94;NUMALT=1;ODDS=15.8512;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=412908;QR=66202;RO=1851;RPL=11520;RPP=24810.7;RPPR=3970.46;RPR=32;RUN=1;SAF=1;SAP=25079.2;SAR=11551;SRF=0;SRP=4022.41;SRR=1851;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:74:40,34:40:1423:34:1208:-86.6381,0,-106.019	1/1:98:0,98:0:0:98:3509:-315.715,-29.5009,0	0/1:90:31,59:31:1116:59:2115:-163.059,0,-73.6581	1/1:155:0,155:0:0:155:5572:-500.274,-46.6597,0	0/1:46:23,23:23:824:23:820:-60.2384,0,-60.6359	0/1:45:26,19:26:932:19:680:-47.897,0,-70.6516	1/1:67:0,67:0:0:67:2369:-212.821,-20.169,0	0/1:148:85,63:85:3040:63:2256:-158.549,0,-229.275	0/1:138:77,61:77:2768:61:2136:-150.822,0,-207.808	0/1:72:35,36:35:1251:36:1280:-93.4413,0,-90.6544	1/1:190:15,175:15:531:175:6266:-515.304,-9.16045,0	1/1:78:0,78:0:0:78:2783:-250.469,-23.4803,0	0/1:82:40,42:40:1436:42:1508:-111.179,0,-104.85	0/1:49:24,25:24:860:25:900:-66.4624,0,-62.9698	1/1:61:0,61:0:0:61:2188:-196.742,-18.3628,0	0/1:84:39,45:39:1396:45:1605:-119.203,0,-100.649	1/1:30:0,30:0:0:30:1080:-97.2115,-9.0309,0	1/1:29:0,29:0:0:29:1040:-93.4326,-8.72987,0	1/1:185:0,185:0:0:185:6624:-595.452,-55.6906,0	1/1:165:1,164:1:36:164:5842:-521.708,-46.0717,0	0/1:194:91,103:91:3272:103:3676:-272.088,0,-236.295	1/1:93:1,92:1:36:92:3270:-290.721,-24.3975,0	0/1:61:25,36:25:900:36:1292:-97.9217,0,-62.9582	0/1:54:19,35:19:671:35:1252:-96.6091,0,-44.4571	0/1:82:32,50:32:1148:50:1756:-133.346,0,-78.9423	1/1:204:0,204:0:0:204:7289:-654.746,-61.4101,0	1/1:210:0,209:0:0:209:7453:-668.315,-62.9153,0	1/1:43:1,42:1:36:42:1495:-130.977,-9.34602,0	0/1:164:76,88:76:2724:88:3123:-231.731,0,-195.974	0/1:95:45,50:45:1599:50:1788:-132.449,0,-115.6	1/1:57:2,55:2:72:55:1968:-169.945,-10.322,0	1/1:318:4,314:4:140:314:11251:-997.758,-82.783,0	1/1:472:1,471:1:36:471:16861:-1510.52,-138.488,0	1/1:223:1,222:1:36:222:7922:-707.726,-63.5314,0	1/1:399:2,397:2:72:397:14181:-1266.93,-113.274,0	1/1:522:0,522:0:0:522:18660:-1675.29,-157.138,0	0/1:196:104,92:104:3716:92:3281:-236.1,0,-275.636	1/1:74:0,74:0:0:74:2652:-238.531,-22.2762,0	1/1:399:0,399:0:0:399:14232:-1278.25,-120.111,0	1/1:125:0,125:0:0:125:4479:-402.852,-37.6288,0	1/1:110:0,110:0:0:110:3948:-355.15,-33.1133,0	1/1:198:0,198:0:0:198:7086:-636.491,-59.6039,0	0/1:82:28,54:28:996:54:1897:-146.112,0,-65.1975	0/1:62:39,23:39:1388:23:828:-55.6994,0,-106.555	0/1:72:46,26:46:1656:26:923:-61.5665,0,-127.653	0/1:34:19,15:19:680:15:540:-38.6878,0,-51.2932	0/1:78:34,44:34:1220:44:1580:-118.901,0,-86.6265	1/1:127:4,123:4:144:123:4411:-383.156,-24.9196,0	1/1:76:0,76:0:0:76:2728:-245.355,-22.8783,0	0/1:106:50,56:50:1792:56:1969:-145.372,0,-129.644	0/1:93:56,37:56:1991:37:1328:-91.7943,0,-151.466	1/1:320:5,315:5:180:315:11275:-994.615,-79.7779,0	1/1:103:0,103:0:0:103:3687:-331.733,-31.0061,0	1/1:60:0,60:0:0:60:2148:-193.477,-18.0618,0	1/1:163:7,156:7:252:156:5581:-479.094,-26.0389,0	0/1:133:67,66:67:2392:66:2347:-171.156,0,-175.427	1/1:18:0,18:0:0:18:648:-58.442,-5.41854,0	1/1:390:2,388:2:72:388:13889:-1241.29,-110.565,0	1/1:224:2,222:2:72:222:7905:-703.491,-60.594,0	0/1:60:45,15:45:1611:15:540:-29.4424,0,-127.211	1/1:63:1,62:1:36:62:2212:-195.41,-15.3666,0	1/1:214:2,212:2:72:212:7580:-674.359,-57.5837,0	1/1:87:0,87:0:0:87:3124:-280.639,-26.1896,0	1/1:198:3,195:3:108:195:6970:-616.092,-49.5288,0	1/1:37:0,37:0:0:37:1320:-118.91,-11.1381,0	1/1:68:0,68:0:0:68:2448:-219.526,-20.47,0	1/1:107:1,106:1:36:106:3804:-338.373,-28.6119,0	1/1:113:0,113:0:0:113:4056:-364.44,-34.0164,0	1/1:496:1,495:1:36:495:17703:-1584.59,-145.713,0	1/1:45:0,45:0:0:45:1612:-144.82,-13.5464,0	1/1:49:0,49:0:0:49:1756:-158.01,-14.7505,0	0/1:572:328,244:328:11697:244:8727:-611.76,0,-879.497	1/1:75:2,73:2:72:73:2595:-226.587,-15.7405,0	0/1:93:49,41:49:1764:41:1476:-105.3,0,-131.59	0/1:112:51,61:51:1824:61:2180:-162.662,0,-130.723	1/1:138:1,137:1:32:137:4907:-438.054,-38.3428,0	1/1:92:0,92:0:0:92:3300:-296.898,-27.6948,0	1/1:65:0,65:0:0:65:2336:-209.906,-19.567,0	1/1:421:9,412:9:324:412:14712:-1292.54,-97.2287,0	1/1:134:0,134:0:0:134:4784:-430.165,-40.338,0	1/1:115:0,115:0:0:115:4109:-369.496,-34.6185,0	1/1:186:0,186:0:0:186:6619:-594.142,-55.9916,0	1/1:38:0,38:0:0:38:1356:-121.923,-11.4391,0	1/1:66:0,66:0:0:66:2372:-213.476,-19.868,0	0/1:56:25,31:25:896:31:1116:-83.1598,0,-63.9107	1/1:158:2,156:2:72:156:5585:-494.488,-40.7733,0	0/1:20:9,11:9:324:11:396:-29.3207,0,-23.4853	1/1:64:0,64:0:0:64:2270:-204.053,-19.2659,0	1/1:65:0,65:0:0:65:2327:-209.534,-19.567,0	1/1:410:0,410:0:0:410:14658:-1315.3,-123.422,0	0/1:473:53,420:53:1880:420:14999:-1204.58,0,-27.0873	0/1:101:70,31:70:2512:31:1112:-69.8309,0,-195.731	1/1:6:0,6:0:0:6:212:-19.4106,-1.80618,0	1/1:91:0,91:0:0:91:3255:-292.713,-27.3937,0
chr06	3091484	.	ATTGC	CTTGC,CTTGG	216115	PASS	AB=0.45779,0.53855;ABP=70.6538,59.4303;AC=145,43;AF=0.771277,0.228723;AN=188;AO=7712,2384;CIGAR=1X4M,1X3M1X;DP=10127;DPB=10127.6;DPRA=0,1.0625;EPP=16749.4,5179.8;EPPR=11.6962;GTI=0;LEN=1,5;MEANALT=1.85106,2.31481;MQM=59.9973,59.9849;MQMR=60;NS=94;NUMALT=2;ODDS=1.09523;PAIRED=0,0;PAIREDR=0;PAO=0,3;PQA=0,104;PQR=0;PRO=0;QA=274550,82971;QR=135;RO=4;RPL=0,0;RPP=16749.4,5179.8;RPPR=5.18177;RPR=7712,2384;RUN=1,1;SAF=0,0;SAP=16749.4,5179.8;SAR=7712,2384;SRF=1;SRP=5.18177;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:20:0,10,10:0:0:10,10:360,352:-58.3864,-29.0082,-25.9979,-29.734,0,-26.7237	1/1:158:0,157,1:0:0:157,1:5615,36:-505.112,-47.2617,0,-502.174,-43.9645,-501.873	1/2:179:0,73,106:0:0:73,106:2595,3696:-512.411,-300.94,-278.965,-211.824,0,-179.915	1/1:182:0,181,0:0:0:181,0:6440,0:-579.33,-54.4864,0,-579.33,-54.4864,-579.33	1/2:49:0,22,27:0:0:22,27:780,928:-139.253,-75.7022,-69.0796,-63.9004,0,-55.7726	1/2:59:0,21,38:0:0:21,38:752,1317:-168.72,-107.389,-101.067,-61.6846,0,-50.2455	1/1:58:0,58,0:0:0:58,0:2067,0:-186.3,-17.4597,0,-186.3,-17.4597,-186.3	1/2:262:0,122,140:0:0:122,140:4336,4889:-751.009,-397.671,-360.945,-353.331,0,-311.187	1/2:83:0,31,49:0:0:31,49:1095,1705:-227.823,-138.647,-129.315,-89.188,0,-74.4375	1/2:180:0,74,106:0:0:74,106:2597,3711:-513.64,-302.29,-280.014,-211.701,0,-179.791	1/2:119:0,54,65:0:0:54,65:1940,2264:-342.724,-184.458,-168.202,-158.621,0,-139.054	1/1:77:0,77,0:0:0:77,0:2751,0:-247.832,-23.1793,0,-247.832,-23.1793,-247.832	1/2:76:0,38,38:0:0:38,38:1347,1342:-219.378,-109.642,-98.2024,-110.09,0,-98.6512	1/2:125:0,58,65:0:0:58,65:2049,2268:-351.406,-184.539,-167.079,-166.94,0,-147.373	1/1:79:0,79,0:0:0:79,0:2782,0:-250.62,-23.7814,0,-250.62,-23.7814,-250.62	1/2:92:0,49,43:0:0:49,43:1743,1475:-262.112,-120.058,-105.307,-142.403,0,-129.459	1/1:131:0,131,0:0:0:131,0:4662,0:-419.741,-39.4349,0,-419.741,-39.4349,-419.741	1/1:68:0,68,0:0:0:68,0:2432,0:-219.136,-20.47,0,-219.136,-20.47,-219.136	1/1:146:0,145,0:0:0:145,0:5169,0:-465.041,-43.6494,0,-465.041,-43.6494,-465.041	1/1:141:0,140,0:0:0:140,0:5028,0:-452.305,-42.1442,0,-452.305,-42.1442,-452.305	1/2:219:0,119,100:0:0:119,100:4220,3431:-622.395,-278.584,-242.761,-343.839,0,-313.736	1/1:86:0,86,0:0:0:86,0:3077,0:-277.159,-25.8886,0,-277.159,-25.8886,-277.159	1/2:18:0,6,12:0:0:6,12:216,420:-52.1488,-34.521,-32.7148,-17.9843,0,-14.372	1/2:189:0,83,106:0:0:83,106:2949,3726:-543.944,-303.64,-278.654,-240.658,0,-208.749	1/2:66:0,33,33:0:0:33,33:1154,1151:-187.84,-93.9599,-84.0259,-94.2291,0,-84.2951	1/1:255:0,255,0:0:0:255,0:8966,0:-806.931,-76.7627,0,-806.931,-76.7627,-806.931	1/1:171:0,171,0:0:0:171,0:6116,0:-550.539,-51.4761,0,-550.539,-51.4761,-550.539	1/1:48:1,47,0:1:36:47,0:1684,0:-148.249,-10.8512,0,-148.55,-14.1484,-151.487	1/2:234:0,109,125:0:0:109,125:3912,4364:-674.42,-355.314,-322.502,-319.46,0,-281.831	1/2:151:0,74,77:0:0:74,77:2635,2671:-432.226,-217.457,-195.181,-215.121,0,-191.942	1/1:60:0,60,0:0:0:60,0:2128,0:-191.789,-18.0618,0,-191.789,-18.0618,-191.789	1/2:6:0,3,3:0:0:3,3:104,108:-17.6186,-9.17208,-8.26899,-8.79971,0,-7.89662	1/1:20:0,20,0:0:0:20,0:712,0:-64.4067,-6.0206,0,-64.4067,-6.0206,-64.4067	1/2:6:0,3,3:0:0:3,3:108,108:-17.9843,-9.17208,-8.26899,-9.17208,0,-8.26899	1/2:6:0,4,2:0:0:4,2:140,71:-17.5273,-6.14,-4.93588,-11.7405,0,-11.1384	1/1:11:0,11,0:0:0:11,0:380,0:-34.532,-3.31133,0,-34.532,-3.31133,-34.532	1/2:237:0,93,144:0:0:93,144:3315,5052:-681.703,-411.484,-383.488,-270.573,0,-227.225	1/1:179:0,179,0:0:0:179,0:6403,0:-576.358,-53.8844,0,-576.358,-53.8844,-576.358	1/1:113:0,112,0:0:0:112,0:3999,0:-359.75,-33.7154,0,-359.75,-33.7154,-359.75	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:120:0,119,0:0:0:119,0:4231,0:-380.669,-35.8226,0,-380.669,-35.8226,-380.669	1/1:68:0,68,0:0:0:68,0:2440,0:-219.855,-20.47,0,-219.855,-20.47,-219.855	1/2:145:0,70,74:0:0:70,74:2492,2562:-411.305,-208.195,-187.123,-203.102,0,-180.826	1/2:117:0,62,55:0:0:62,55:2224,1873:-333.702,-152.29,-133.627,-181.76,0,-165.204	1/2:71:0,37,33:0:0:37,33:1312,1122:-198.034,-91.1351,-79.997,-107.03,0,-97.0959	1/2:102:0,48,54:0:0:48,54:1703,1887:-292.604,-153.851,-139.401,-139.106,0,-122.85	1/2:102:0,48,53:0:0:48,53:1709,1831:-288.048,-148.755,-134.306,-139.285,0,-123.33	1/1:131:0,130,1:0:0:130,1:4629,36:-416.414,-39.1339,0,-413.477,-35.8367,-413.175	1/1:117:0,117,0:0:0:117,0:4152,0:-373.862,-35.2205,0,-373.862,-35.2205,-373.862	1/2:248:0,105,142:0:0:105,142:3747,4972:-710.14,-404.671,-373.063,-305.601,0,-262.855	1/2:206:0,107,99:0:0:107,99:3786,3461:-590.283,-281.905,-249.695,-308.729,0,-278.927	1/2:17:0,9,8:0:0:9,8:320,254:-46.8594,-20.7616,-18.0524,-26.4331,0,-24.0248	1/1:147:0,147,0:0:0:147,0:5251,0:-472.728,-44.2514,0,-472.728,-44.2514,-472.728	1/1:58:0,58,0:0:0:58,0:2061,0:-185.759,-17.4597,0,-185.759,-17.4597,-185.759	1/2:9:0,5,4:0:0:5,4:176,144:-26.4331,-12.1095,-10.6043,-14.6799,0,-13.4757	1/2:128:0,57,71:0:0:57,71:1986,2486:-364.124,-202.621,-185.462,-161.852,0,-140.479	1/1:29:0,29,0:0:0:29,0:1036,0:-93.5539,-8.72987,0,-93.5539,-8.72987,-93.5539	1/2:6:0,4,2:0:0:4,2:144,71:-17.893,-6.14,-4.93588,-12.1095,0,-11.5074	1/2:23:0,10,13:0:0:10,13:348,458:-65.9361,-37.641,-34.6307,-28.6448,0,-24.7314	1/2:76:0,24,51:0:0:24,51:855,1763:-212.992,-143.299,-136.074,-69.7433,0,-54.3907	1/1:217:0,215,1:0:0:215,1:7656,35:-688.721,-64.7215,0,-685.874,-61.8787,-685.573	1/2:4:0,3,1:0:0:3,1:108,27:-11.2784,-2.39875,-1.49566,-9.17208,0,-8.87105	1/1:198:0,197,0:0:0:197,0:7010,0:-630.615,-59.3029,0,-630.615,-59.3029,-630.615	1/1:161:0,151,9:0:0:151,9:5396,321:-485.415,-45.4555,0,-459.248,-19.2909,-456.538	1/1:147:0,146,0:0:0:146,0:5212,0:-468.861,-43.9504,0,-468.861,-43.9504,-468.861	1/1:59:0,59,0:0:0:59,0:2083,0:-187.74,-17.7608,0,-187.74,-17.7608,-187.74	1/1:158:0,150,8:0:0:150,8:5332,277:-479.666,-45.1545,0,-457.155,-22.2968,-454.747	1/1:210:0,209,1:0:0:209,1:7468,34:-671.823,-62.9153,0,-669.065,-59.8174,-668.764	1/1:65:0,65,0:0:0:65,0:2310,0:-208.16,-19.567,0,-208.16,-19.567,-208.16	1/1:109:0,109,0:0:0:109,0:3874,0:-348.854,-32.8123,0,-348.854,-32.8123,-348.854	1/1:117:0,116,0:0:0:116,0:4101,0:-368.916,-34.9195,0,-368.916,-34.9195,-368.916	1/2:35:0,16,19:0:0:16,19:572,653:-100.016,-53.37,-48.5535,-46.9969,0,-41.2774	1/1:67:0,66,1:0:0:66,1:2368,36:-213.018,-19.868,0,-210.081,-16.5707,-209.78	1/2:100:0,48,52:0:0:48,52:1707,1816:-287.181,-148.068,-133.619,-139.466,0,-123.812	1/2:118:1,53,64:1:35:53,64:1846,2215:-326.965,-177.151,-164.044,-147.264,0,-130.846	1/1:111:0,107,3:0:0:107,3:3832,98:-344.741,-32.2102,0,-336.828,-24.3212,-335.925	1/1:116:0,116,0:0:0:116,0:4147,0:-373.413,-34.9195,0,-373.413,-34.9195,-373.413	1/1:118:0,116,2:0:0:116,2:4147,71:-373.058,-34.9195,0,-367.273,-28.7795,-366.671	1/2:14:0,8,6:0:0:8,6:284,214:-40.941,-17.8016,-15.3934,-23.4951,0,-21.6889	1/1:80:0,79,1:0:0:79,1:2801,36:-251.97,-23.7814,0,-249.033,-20.4841,-248.732	1/1:93:0,93,0:0:0:93,0:3298,0:-297.038,-27.9958,0,-297.038,-27.9958,-297.038	1/1:167:0,166,0:0:0:166,0:5926,0:-533.089,-49.971,0,-533.089,-49.971,-533.089	1/1:121:0,121,0:0:0:121,0:4335,0:-390.324,-36.4246,0,-390.324,-36.4246,-390.324	1/1:84:0,84,0:0:0:84,0:3000,0:-270.232,-25.2865,0,-270.232,-25.2865,-270.232	1/2:165:0,85,78:0:0:85,78:3014,2718:-466.643,-221.089,-195.502,-245.608,0,-222.127	1/1:185:0,182,2:0:0:182,2:6491,71:-583.957,-54.7875,0,-578.172,-48.9324,-577.57	1/2:45:1,18,25:1:33:18,25:644,876:-120.834,-68.6175,-65.8664,-49.8591,0,-45.0002	1/1:83:0,83,0:0:0:83,0:2961,0:-266.722,-24.9855,0,-266.722,-24.9855,-266.722	1/1:76:1,75,0:1:31:75,0:2663,0:-236.817,-19.7788,0,-237.118,-22.5773,-239.606	1/1:109:0,109,0:0:0:109,0:3866,0:-348.137,-32.8123,0,-348.137,-32.8123,-348.137	1/2:158:0,71,86:0:0:71,86:2527,2988:-448.864,-242.908,-221.535,-205.949,0,-180.06	1/2:106:0,34,72:0:0:34,72:1220,2480:-301.301,-201.783,-191.548,-99.8718,0,-78.1976	1/1:119:0,119,0:0:0:119,0:4240,0:-381.779,-35.8226,0,-381.779,-35.8226,-381.779	1/1:129:0,129,0:0:0:129,0:4607,0:-414.771,-38.8329,0,-414.771,-38.8329,-414.771
chr06	3218309	.	GGTA	CGTG	74390.8	PASS	AB=0.407317;ABP=1071.69;AC=94;AF=0.5;AN=188;AO=5834;CIGAR=1X2M1X;DP=14323;DPB=14323;DPRA=0;EPP=12645.3;EPPR=18141.5;GTI=0;LEN=4;MEANALT=1.74468;MQM=37.6054;MQMR=57.7637;NS=94;NUMALT=1;ODDS=82.5464;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205165;QR=296739;RO=8409;RPL=3;RPP=12645.3;RPPR=18141.5;RPR=5831;RUN=1;SAF=5834;SAP=12671.4;SAR=0;SRF=8409;SRP=18262.9;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:40,17:40:1405:17:555:-31.8258,0,-109.433	0/1:239:158,79:158:5603:79:2735:-168.86,0,-432.724	0/1:302:115,187:115:4044:187:6560:-482.879,0,-271.984	0/1:301:168,132:168:5955:132:4634:-290.122,0,-445.322	0/1:110:76,32:76:2695:32:1123:-64.0943,0,-208.898	0/1:75:43,31:43:1497:31:1112:-75.2364,0,-112.324	0/1:219:161,58:161:5675:58:2043:-103.153,0,-444.899	0/1:321:165,156:165:5800:156:5518:-384.789,0,-424.763	0/1:150:108,41:108:3760:41:1426:-80.188,0,-292.908	0/1:174:128,39:128:4469:39:1390:-62.6047,0,-350.267	0/1:85:47,37:47:1686:37:1295:-81.8871,0,-125.569	0/1:98:61,33:61:2171:33:1134:-69.6372,0,-167.03	0/1:103:63,40:63:2246:40:1412:-92.8618,0,-171.073	0/1:140:92,47:92:3225:47:1675:-101.44,0,-247.063	0/1:93:57,34:57:2027:34:1199:-70.0807,0,-155.012	0/1:53:43,10:43:1516:10:350:-14.6921,0,-119.779	0/1:63:50,12:50:1755:12:425:-16.6187,0,-139.118	0/1:71:51,20:51:1813:20:706:-39.5366,0,-142.073	0/1:49:39,8:39:1372:8:288:-11.0654,0,-109.269	0/1:271:191,79:191:6742:79:2799:-150.036,0,-524.983	0/1:253:184,68:184:6412:68:2378:-127.617,0,-499.603	0/1:161:79,82:79:2792:82:2913:-179.545,0,-203.028	0/1:134:57,76:57:2035:76:2658:-180.179,0,-142.236	0/1:234:180,53:180:6333:53:1860:-89.7866,0,-497.677	0/1:109:74,35:74:2623:35:1233:-73.4697,0,-203.329	0/1:419:181,235:181:6405:235:8250:-525.786,0,-450.878	0/1:249:160,87:160:5617:87:3109:-192.724,0,-431.003	0/1:47:31,16:31:1101:16:565:-34.8005,0,-85.2365	0/1:484:277,202:277:9758:202:7122:-419.062,0,-729.245	0/1:241:129,110:129:4562:110:3891:-260.828,0,-336.871	0/1:183:98,85:98:3440:85:2994:-192.835,0,-254.702	0/1:12:2,10:2:72:10:347:-25.9377,0,-3.17547	0/1:26:16,10:16:561:10:359:-22.7168,0,-42.966	0/1:9:3,6:3:108:6:215:-15.2892,0,-7.29187	0/1:18:14,4:14:490:4:142:-6.81847,0,-38.7867	0/1:5:2,3:2:64:3:104:-7.98894,0,-4.57157	0/1:312:170,142:170:5952:142:4971:-296.512,0,-438.143	0/1:184:121,63:121:4272:63:2232:-136.562,0,-329.236	0/1:82:64,18:64:2264:18:642:-31.313,0,-179.235	0/1:15:7,7:7:238:7:249:-16.5459,0,-17.169	0/1:244:115,124:115:4050:124:4353:-301.131,0,-292.397	0/1:26:15,11:15:539:11:394:-26.2836,0,-41.0194	0/1:193:107,86:107:3764:86:3022:-201.309,0,-280.349	0/1:109:94,14:94:3318:14:485:-7.48449,0,-264.578	0/1:79:45,34:45:1559:34:1202:-74.5904,0,-116.299	0/1:111:57,54:57:2038:54:1894:-116.654,0,-147.979	0/1:193:106,87:106:3751:87:3029:-206.704,0,-279.058	0/1:310:130,178:130:4563:178:6199:-423.458,0,-317.749	0/1:163:106,55:106:3740:55:1912:-106.231,0,-288.043	0/1:237:170,67:170:6058:67:2337:-123.429,0,-470.884	0/1:255:191,64:191:6751:64:2216:-99.7286,0,-528.134	0/1:13:7,6:7:247:6:208:-12.6784,0,-18.429	0/1:201:124,77:124:4414:77:2734:-179.87,0,-336.682	0/1:92:44,47:44:1555:47:1669:-103.933,0,-112.562	0/1:19:8,11:8:285:11:375:-27.2577,0,-20.107	0/1:241:109,131:109:3853:131:4571:-319.033,0,-272.061	0/1:39:24,14:24:847:14:501:-30.0647,0,-64.7334	0/1:19:12,7:12:419:7:244:-12.7222,0,-31.9772	0/1:15:10,5:10:359:5:180:-9.72183,0,-27.9714	0/1:106:64,42:64:2286:42:1433:-91.3848,0,-173.309	0/1:174:93,81:93:3306:81:2872:-184.427,0,-245.362	0/1:10:9,1:9:322:1:36:-0.288725,0,-25.1111	0/1:297:186,109:186:6537:109:3811:-211.938,0,-499.214	0/1:370:211,156:211:7444:156:5430:-338.73,0,-558.967	0/1:183:143,39:143:5056:39:1357:-59.5875,0,-400.085	0/1:151:67,82:67:2389:82:2863:-192.2,0,-169.891	0/1:232:138,92:138:4860:92:3254:-199.092,0,-368.004	0/1:283:111,170:111:3929:170:6012:-411.174,0,-268.788	0/1:24:16,8:16:568:8:287:-15.5053,0,-44.2236	0/1:134:114,20:114:4030:20:698:-21.2367,0,-322.493	0/1:95:66,29:66:2301:29:1028:-52.3792,0,-177.986	0/1:36:19,17:19:662:17:591:-38.7944,0,-48.7451	0/1:353:203,150:203:7132:150:5253:-355.031,0,-535.539	0/1:166:88,77:88:3086:77:2727:-184.42,0,-227.59	0/1:268:107,159:107:3764:159:5548:-396.255,0,-256.722	0/1:389:182,206:182:6454:206:7290:-484.717,0,-463.732	0/1:120:75,42:75:2629:42:1490:-95.2332,0,-201.316	0/1:154:99,55:99:3519:55:1951:-123.283,0,-270.48	0/1:20:4,16:4:144:16:569:-40.342,0,-7.25633	0/1:223:127,96:127:4519:96:3421:-222.759,0,-339.721	0/1:123:93,30:93:3249:30:1051:-55.1086,0,-255.595	0/1:362:172,188:172:6051:188:6620:-437.354,0,-435.876	0/1:122:81,40:81:2874:40:1430:-81.2298,0,-222.228	0/1:72:45,27:45:1599:27:971:-58.2062,0,-122.509	0/1:90:71,19:71:2503:19:682:-28.6895,0,-197.534	0/1:181:129,52:129:4566:52:1833:-97.8487,0,-356.578	0/1:48:36,12:36:1290:12:418:-22.395,0,-101.542	0/1:88:64,23:64:2267:23:811:-44.2264,0,-176.418	0/1:78:49,29:49:1751:29:1032:-67.349,0,-133.858	0/1:35:26,9:26:911:9:324:-16.9885,0,-71.7538	0/1:120:78,42:78:2757:42:1485:-89.8667,0,-211.278	0/1:76:58,18:58:2051:18:629:-29.7638,0,-159.821	0/1:293:136,156:136:4793:156:5487:-367.949,0,-343.264	0/1:137:70,66:70:2475:66:2333:-149.884,0,-181.658
chr06	3218319	.	C	T	81503.4	PASS	AB=0.411899;ABP=945.777;AC=94;AF=0.5;AN=188;AO=5760;CIGAR=1X;DP=13984;DPB=13984;DPRA=0;EPP=11357.3;EPPR=356.597;GTI=0;LEN=1;MEANALT=1.03191;MQM=37.5983;MQMR=57.781;NS=94;NUMALT=1;ODDS=97.1858;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=206062;QR=293311;RO=8221;RPL=136;RPP=11357.3;RPPR=356.597;RPR=5624;RUN=1;SAF=5760;SAP=12510.7;SAR=0;SRF=8221;SRP=17854.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:38,16:38:1350:16:567:-32.9287,0,-105.398	0/1:230:155,75:155:5528:75:2688:-166.333,0,-428.36	0/1:293:110,183:110:3911:183:6542:-484.691,0,-262.659	0/1:296:167,128:167:5972:128:4577:-284.735,0,-448.355	0/1:107:75,32:75:2684:32:1152:-67.0024,0,-208.79	0/1:72:41,31:41:1450:31:1116:-76.4316,0,-109.009	0/1:214:159,55:159:5666:55:1953:-98.0282,0,-445.58	0/1:308:156,152:156:5550:152:5464:-382.991,0,-406.216	0/1:146:105,41:105:3760:41:1472:-84.8071,0,-294.164	0/1:170:126,44:126:4499:44:1584:-78.4645,0,-351.663	0/1:84:47,37:47:1679:37:1319:-83.4473,0,-125.242	0/1:96:64,32:64:2288:32:1148:-69.5985,0,-177.273	0/1:101:63,38:63:2234:38:1355:-88.3191,0,-170.588	0/1:139:92,47:92:3257:47:1691:-102.825,0,-250.084	0/1:92:56,36:56:2012:36:1292:-76.5422,0,-153.634	0/1:51:42,9:42:1504:9:324:-12.8816,0,-119.303	0/1:62:50,12:50:1792:12:421:-16.6882,0,-142.804	0/1:70:50,20:50:1772:20:720:-40.9446,0,-138.685	0/1:49:38,11:38:1325:11:396:-20.4915,0,-104.795	0/1:261:186,75:186:6651:75:2651:-140.869,0,-519.709	0/1:245:177,68:177:6284:68:2436:-134.304,0,-490.492	0/1:153:73,79:73:2587:79:2827:-175.043,0,-187.101	0/1:130:55,75:55:1971:75:2666:-180.307,0,-137.581	0/1:227:175,52:175:6236:52:1868:-91.7731,0,-490.94	0/1:103:71,32:71:2532:32:1148:-67.6108,0,-196.952	0/1:411:176,235:176:6292:235:8423:-536.773,0,-442.486	0/1:242:156,86:156:5547:86:3096:-192.861,0,-426.479	0/1:46:29,17:29:1031:17:608:-38.9368,0,-79.249	0/1:468:273,195:273:9703:195:6950:-406.747,0,-726.921	0/1:235:124,111:124:4436:111:3992:-270.08,0,-326.995	0/1:180:98,82:98:3494:82:2944:-188.196,0,-260.458	0/1:12:2,10:2:72:10:360:-26.9236,0,-3.17547	0/1:23:13,10:13:459:10:360:-23.6828,0,-34.7009	0/1:9:3,6:3:104:6:216:-15.3059,0,-6.91951	0/1:16:13,3:13:464:3:108:-4.99108,0,-37.0503	0/1:5:2,3:2:72:3:108:-8.30241,0,-5.32298	0/1:303:166,137:166:5935:137:4928:-291.855,0,-439.219	0/1:183:121,62:121:4327:62:2224:-135.919,0,-334.481	0/1:82:64,18:64:2300:18:648:-31.7923,0,-182.473	0/1:13:6,7:6:216:7:252:-18.1423,0,-15.8473	0/1:240:112,128:112:3994:128:4579:-319.433,0,-287.397	0/1:26:15,11:15:536:11:396:-26.4092,0,-40.748	0/1:189:105,84:105:3745:84:3007:-200.435,0,-279.796	0/1:106:92,14:92:3281:14:504:-9.84158,0,-262.251	0/1:77:42,35:42:1496:35:1250:-78.7322,0,-111.256	0/1:108:55,53:55:1960:53:1881:-115.601,0,-142.117	0/1:187:106,81:106:3779:81:2884:-195.165,0,-283.336	0/1:301:127,174:127:4532:174:6190:-421.476,0,-317.394	0/1:160:105,55:105:3739:55:1959:-109.597,0,-288.539	0/1:236:168,67:168:6008:67:2400:-128,0,-466.69	0/1:253:191,62:191:6808:62:2216:-98.1951,0,-533.436	0/1:12:7,5:7:244:5:180:-10.244,0,-18.4742	0/1:200:123,77:123:4397:77:2772:-183.16,0,-335.448	0/1:92:44,48:44:1576:48:1724:-106.649,0,-114.436	0/1:18:8,10:8:279:10:356:-26.0407,0,-19.8481	0/1:228:98,130:98:3492:130:4668:-329.128,0,-244.781	0/1:38:24,14:24:860:14:495:-29.9815,0,-66.2653	0/1:19:12,7:12:424:7:252:-12.8414,0,-32.3763	0/1:16:10,6:10:360:6:212:-11.9783,0,-27.761	0/1:103:63,40:63:2264:40:1432:-91.3912,0,-172.217	0/1:172:93,79:93:3319:79:2832:-180.825,0,-247.139	0/1:10:7,3:7:252:3:108:-5.77059,0,-19.7898	0/1:288:179,109:179:6404:109:3903:-218.808,0,-489.614	0/1:363:209,154:209:7431:154:5479:-342.396,0,-559.35	0/1:176:138,38:138:4935:38:1364:-61.8599,0,-391.296	0/1:148:66,82:66:2359:82:2944:-196.935,0,-167.999	0/1:227:136,91:136:4855:91:3257:-199.107,0,-368.71	0/1:276:105,171:105:3754:171:6120:-420.968,0,-254.883	0/1:24:16,8:16:572:8:284:-15.2923,0,-44.5749	0/1:128:109,19:109:3908:19:675:-21.0382,0,-313.314	0/1:90:61,29:61:2167:29:1036:-54.308,0,-167.93	0/1:36:19,17:19:669:17:593:-38.9832,0,-49.3867	0/1:346:200,146:200:7102:146:5207:-352.423,0,-534.924	0/1:162:86,76:86:3062:76:2723:-184.578,0,-226.626	0/1:261:104,157:104:3720:157:5572:-399.275,0,-254.831	0/1:384:179,205:179:6392:205:7359:-489.318,0,-459.583	0/1:118:73,45:73:2601:45:1620:-105.972,0,-198.806	0/1:151:96,55:96:3440:55:1955:-124.515,0,-264.275	0/1:20:4,16:4:140:16:570:-40.102,0,-6.88729	0/1:221:125,96:125:4459:96:3452:-225.719,0,-334.927	0/1:120:90,30:90:3199:30:1080:-58.3029,0,-251.996	0/1:350:166,184:166:5944:184:6570:-434.658,0,-429.601	0/1:118:78,40:78:2804:40:1440:-82.9334,0,-217.069	0/1:72:45,27:45:1611:27:968:-58.1558,0,-123.589	0/1:91:72,19:72:2571:19:684:-28.4842,0,-203.231	0/1:179:128,51:128:4571:51:1811:-96.377,0,-357.623	0/1:49:37,12:37:1332:12:432:-22.6609,0,-104.965	0/1:87:64,23:64:2287:23:828:-46.065,0,-178.576	0/1:77:49,28:49:1760:28:1004:-65.1335,0,-134.969	0/1:34:25,9:25:887:9:324:-17.2896,0,-69.8945	0/1:120:78,42:78:2787:42:1485:-89.8311,0,-213.806	0/1:75:57,18:57:2035:18:648:-31.3097,0,-158.634	0/1:288:134,154:134:4782:154:5499:-369.069,0,-343.21	0/1:133:69,64:69:2480:64:2285:-146.583,0,-183.365
chr06	3218331	.	T	G	143944	PASS	AB=0.584825;ABP=876.091;AC=94;AF=0.5;AN=188;AO=8170;CIGAR=1X;DP=13970;DPB=13970;DPRA=0;EPP=17743.9;EPPR=12582.3;GTI=0;LEN=1;MEANALT=1.06383;MQM=57.7704;MQMR=37.6603;NS=94;NUMALT=1;ODDS=89.3601;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=290911;QR=207050;RO=5793;RPL=8170;RPP=17743.9;RPPR=12582.3;RPR=0;RUN=1;SAF=8170;SAP=17743.9;SAR=0;SRF=5793;SRP=12582.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:16,39:16:568:39:1391:-108.772,0,-32.6047	0/1:232:77,155:77:2749:155:5545:-429.293,0,-171.168	0/1:290:181,109:181:6457:109:3827:-256.524,0,-477.983	0/1:294:130,164:130:4652:164:5865:-439.381,0,-291.801	0/1:108:32,76:32:1144:76:2706:-210.162,0,-66.0942	0/1:72:32,40:32:1148:40:1432:-107.402,0,-79.2733	0/1:212:57,155:57:2044:155:5499:-431.179,0,-105.139	0/1:314:154,160:154:5518:160:5726:-420.189,0,-385.951	0/1:144:39,105:39:1404:105:3740:-292.945,0,-80.0265	0/1:173:44,129:44:1580:129:4545:-355.46,0,-77.2015	0/1:84:37,47:37:1311:47:1686:-125.935,0,-83.0059	0/1:96:34,62:34:1196:62:2201:-169.447,0,-74.0167	0/1:101:40,61:40:1427:61:2153:-163.312,0,-94.652	0/1:133:46,87:46:1647:87:3077:-235.755,0,-100.866	0/1:92:34,57:34:1216:57:2029:-155.358,0,-72.4028	0/1:53:10,43:10:360:43:1528:-120.861,0,-15.5133	0/1:62:12,50:12:417:50:1773:-141.137,0,-16.2653	0/1:69:20,49:20:720:49:1748:-136.83,0,-41.2457	0/1:48:10,38:10:360:38:1324:-105.006,0,-17.5538	0/1:265:79,186:79:2807:186:6639:-517.423,0,-152.565	0/1:248:65,183:65:2323:183:6499:-508.935,0,-123.695	0/1:159:81,78:81:2904:78:2750:-199.848,0,-178.453	0/1:134:77,57:77:2741:57:2025:-141.293,0,-185.383	0/1:226:52,174:52:1864:174:6188:-487.507,0,-92.2346	0/1:105:34,71:34:1188:71:2528:-195.982,0,-70.7633	0/1:414:238,175:238:8536:175:6263:-439.087,0,-546.203	0/1:240:86,152:86:3088:152:5405:-414.558,0,-193.475	0/1:45:17,28:17:593:28:987:-75.5905,0,-38.0327	0/1:468:200,268:200:7144:268:9597:-717.272,0,-421.324	0/1:231:108,123:108:3857:123:4396:-324.607,0,-260.957	0/1:176:83,93:83:2971:93:3312:-245.299,0,-192.008	0/1:11:10,1:10:356:1:36:-0.285235,0,-26.9831	0/1:26:10,16:10:360:16:542:-41.2496,0,-22.7797	0/1:9:6,3:6:207:3:108:-7.29187,0,-15.0005	0/1:17:4,13:4:140:13:444:-34.9807,0,-6.89372	0/1:5:3,2:3:108:2:53:-3.5257,0,-8.30241	0/1:307:141,166:141:5041:166:5915:-436.238,0,-300.303	0/1:185:63,122:63:2249:122:4367:-337.477,0,-137.472	0/1:78:17,61:17:612:61:2184:-173.242,0,-29.8438	0/1:15:8,7:8:288:7:252:-18.4775,0,-19.7482	0/1:237:125,112:125:4484:112:3996:-288.477,0,-312.821	0/1:26:11,15:11:396:15:540:-41.1098,0,-26.4092	0/1:186:84,102:84:3008:102:3656:-272.74,0,-201.63	0/1:106:14,92:14:500:92:3291:-263.08,0,-9.61979	0/1:73:34,39:34:1220:39:1365:-100.669,0,-77.4474	0/1:110:54,56:54:1927:56:2001:-145.37,0,-118.753	0/1:190:87,103:87:3107:103:3692:-274.651,0,-214.021	0/1:302:177,125:177:6294:125:4459:-310.524,0,-430.174	0/1:156:55,101:55:1953:101:3611:-278.227,0,-110.504	0/1:232:66,166:66:2348:166:5941:-461.857,0,-125.455	0/1:246:60,186:60:2139:186:6611:-518.236,0,-94.3144	0/1:12:5,7:5:176:7:252:-19.1438,0,-10.1545	0/1:196:76,120:76:2702:120:4304:-328.288,0,-178.5	0/1:91:49,42:49:1756:42:1493:-107.269,0,-109.602	0/1:19:11,8:11:372:8:288:-20.3669,0,-26.6171	0/1:234:130,104:130:4663:104:3690:-260.414,0,-327.625	0/1:37:13,24:13:468:24:856:-66.2056,0,-27.9035	0/1:18:7,11:7:252:11:396:-30.1584,0,-13.1424	0/1:15:5,10:5:180:10:355:-27.6083,0,-9.72183	0/1:102:40,62:40:1432:62:2220:-168.632,0,-91.6587	0/1:173:79,94:79:2836:94:3340:-248.73,0,-180.744	0/1:10:3,7:3:108:7:252:-19.7898,0,-5.77059	0/1:288:109,179:109:3908:179:6381:-487.539,0,-219.935	0/1:362:156,206:156:5527:206:7298:-547.734,0,-347.13	0/1:179:40,139:40:1421:139:4922:-389.231,0,-65.7589	0/1:148:81,67:81:2896:67:2412:-172.54,0,-193.302	0/1:228:91,137:91:3256:137:4860:-368.861,0,-199.076	0/1:276:171,105:171:6156:105:3749:-254.433,0,-423.281	0/1:22:6,16:6:216:16:564:-44.4538,0,-10.5502	0/1:132:20,111:20:712:111:3927:-313.775,0,-23.0565	0/1:94:30,64:30:1076:64:2272:-176.17,0,-55.9889	0/1:35:16,19:16:576:19:680:-50.6694,0,-37.7271	0/1:339:147,191:147:5233:191:6804:-510.164,0,-356.687	0/1:161:77,84:77:2755:84:3016:-222.695,0,-187.681	0/1:256:155,100:155:5547:100:3583:-244.117,0,-397.561	0/1:383:205,178:205:7351:178:6369:-457.815,0,-489.448	0/1:118:46,72:46:1648:72:2584:-197.278,0,-108.566	0/1:150:54,96:54:1944:96:3433:-263.946,0,-123.699	0/1:21:17,4:17:612:4:140:-6.58626,0,-43.2813	0/1:220:95,125:95:3386:125:4471:-336.303,0,-220.821	0/1:120:28,92:28:1004:92:3276:-258.923,0,-51.6411	0/1:357:185,172:185:6596:172:6095:-441.071,0,-434.379	0/1:120:41,79:41:1472:79:2813:-217.277,0,-84.4929	0/1:70:27,43:27:968:43:1521:-116.093,0,-58.6774	0/1:88:19,69:19:684:69:2453:-193.493,0,-29.3873	0/1:171:49,122:49:1752:122:4338:-339.072,0,-93.9752	0/1:49:12,37:12:423:37:1313:-103.312,0,-21.9195	0/1:86:24,62:24:852:62:2204:-171.749,0,-48.5853	0/1:78:29,49:29:1036:49:1752:-133.948,0,-67.7047	0/1:33:9,24:9:320:24:856:-67.4085,0,-17.3149	0/1:118:43,75:43:1548:75:2643:-201.64,0,-95.2203	0/1:75:18,57:18:644:57:2032:-158.395,0,-31.0883	0/1:289:154,135:154:5523:135:4783:-343.569,0,-369.948	0/1:137:67,70:67:2392:70:2473:-181.542,0,-153.607
chr06	3218456	.	A	C	27255.1	PASS	AB=0.496654;ABP=3.34452;AC=44;AF=0.234043;AN=188;AO=1731;CIGAR=1X;DP=9248;DPB=9248;DPRA=0.965454;EPP=3727.17;EPPR=16284.7;GTI=4;LEN=1;MEANALT=1.09259;MQM=59.7319;MQMR=59.9344;NS=94;NUMALT=1;ODDS=0.405918;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60373;QR=268718;RO=7510;RPL=1727;RPP=3727.17;RPPR=16284.7;RPR=4;RUN=1;SAF=1731;SAP=3761.83;SAR=0;SRF=7510;SRP=16310.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:10,14:10:356:14:487:-36.9308,0,-25.1565	0/0:86:86,0:86:3092:0:0:0,-25.8886,-278.507	0/1:190:98,92:98:3496:92:3210:-231.915,0,-257.656	0/0:273:273,0:273:9764:0:0:0,-82.1812,-878.606	0/1:59:22,37:22:788:37:1290:-98.6386,0,-53.484	0/1:39:14,25:14:500:25:875:-67.3122,0,-33.596	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.634	0/1:203:111,92:111:3976:92:3218:-228.675,0,-296.912	0/1:72:50,22:50:1800:22:779:-48.7579,0,-140.608	0/1:72:34,38:34:1224:38:1320:-97.4223,0,-88.7929	0/1:49:22,27:22:792:27:923:-68.6273,0,-56.8327	0/0:68:68,0:68:2444:0:0:0,-20.47,-220.025	0/1:70:34,36:34:1224:36:1224:-89.3482,0,-89.3949	0/1:62:37,25:37:1328:25:857:-58.7778,0,-101.089	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/1:40:15,25:15:536:25:884:-67.8326,0,-36.529	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.228	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:194:192,2:192:6869:2:68:0,-51.9421,-611.816	0/1:129:80,49:80:2872:49:1736:-117.692,0,-219.884	0/0:195:195,0:195:6961:0:0:0,-58.7008,-626.536	0/1:78:45,33:45:1616:33:1169:-82.0326,0,-122.245	0/1:59:32,27:32:1148:27:953:-68.3225,0,-85.8691	0/1:42:24,18:24:856:18:629:-44.2905,0,-64.7178	0/0:279:275,3:275:9872:3:99:0,-74.8021,-879.117	0/0:192:192,0:192:6868:0:0:0,-57.7978,-618.186	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:303:144,159:144:5103:159:5571:-410.306,0,-368.2	0/1:267:117,150:117:4172:150:5291:-395.512,0,-295.284	0/0:74:73,1:73:2616:1:36:0,-18.6779,-232.089	0/1:9:6,3:6:216:3:108:-7.3643,0,-17.0812	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:7:5,2:5:176:2:72:-4.72951,0,-14.0778	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:141:58,83:58:2080:83:2840:-213.392,0,-145.025	0/0:195:195,0:195:6996:0:0:0,-58.7008,-629.689	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.57002	0/0:183:183,0:183:6541:0:0:0,-55.0885,-588.768	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4777	0/1:138:56,82:56:2008:82:2829:-213.305,0,-139.451	0/1:46:22,24:22:792:24:807:-59.0885,0,-57.7583	0/1:51:31,20:31:1116:20:698:-47.7889,0,-85.3992	0/1:78:43,35:43:1544:35:1235:-87.9722,0,-115.686	0/1:174:97,75:97:3480:75:2623:-184.173,0,-260.896	0/0:260:257,3:257:9180:3:104:0,-68.565,-816.469	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03	0/1:172:91,81:91:3260:81:2856:-205.485,0,-241.843	0/1:104:56,48:56:1993:48:1683:-120.445,0,-148.335	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/0:173:173,0:173:6177:0:0:0,-52.0782,-555.838	0/0:100:100,0:100:3580:0:0:0,-30.103,-322.407	0/1:22:12,10:12:424:10:356:-25.7586,0,-31.8738	0/1:177:100,77:100:3596:77:2719:-191.644,0,-270.55	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.239	0/1:16:6,9:6:216:9:324:-24.574,0,-14.9152	0/1:14:8,6:8:284:6:212:-15.2095,0,-21.6889	0/1:70:31,39:31:1108:39:1353:-100.935,0,-78.9589	0/0:99:99,0:99:3529:0:0:0,-29.802,-317.816	0/1:10:7,3:7:252:3:104:-6.69251,0,-20.0187	0/0:305:305,0:305:10905:0:0:0,-91.8141,-981.345	0/0:203:197,6:197:7056:6:216:0,-41.3186,-615.302	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/0:90:89,0:89:3200:0:0:0,-26.7917,-287.842	0/0:141:140,1:140:5020:1:36:0,-38.847,-448.34	0/0:188:186,2:186:6646:2:72:0,-49.7569,-591.34	0/0:36:36,0:36:1275:0:0:0,-10.8371,-115.052	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.709	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/1:36:13,23:13:460:23:828:-64,0,-30.8983	0/0:127:127,0:127:4521:0:0:0,-38.2308,-407.049	0/1:62:33,29:33:1165:29:1028:-74.1692,0,-86.4911	0/1:72:35,37:35:1232:37:1314:-96.8843,0,-89.5053	0/0:236:234,1:234:8376:1:36:0,-67.5071,-750.251	0/0:127:127,0:127:4537:0:0:0,-38.2308,-408.496	0/0:150:150,0:150:5361:0:0:0,-45.1545,-482.621	0/1:19:5,14:5:176:14:471:-36.9858,0,-10.4654	0/0:111:110,1:110:3939:1:36:0,-29.8161,-351.103	0/0:149:149,0:149:5348:0:0:0,-44.8535,-481.434	0/0:230:230,0:230:8224:0:0:0,-69.2369,-740.171	0/0:69:69,0:69:2471:0:0:0,-20.7711,-222.626	0/0:74:74,0:74:2648:0:0:0,-22.2762,-238.564	0/1:45:25,20:25:900:20:685:-48.4209,0,-67.7747	0/0:110:106,4:106:3792:4:127:0,-21.3689,-329.732	0/1:25:9,16:9:324:16:514:-39.0362,0,-21.9801	0/0:62:62,0:62:2232:0:0:0,-18.6639,-201.144	0/0:67:67,0:67:2392:0:0:0,-20.169,-215.264	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.655	0/1:113:61,51:61:2175:51:1750:-123.738,0,-161.98	0/1:53:13,40:13:464:40:1326:-103.662,0,-26.1429	0/0:210:210,0:210:7501:0:0:0,-63.2163,-675.128	0/0:90:90,0:90:3201:0:0:0,-27.0927,-288.311
chr06	3908868	.	AATG	GATA,GATG	215870	PASS	AB=0.490691,0.506614;ABP=6.08292,4.5615;AC=144,44;AF=0.765957,0.234043;AN=188;AO=7960,2092;CIGAR=1X2M1X,1X3M;DP=10071;DPB=10071.5;DPRA=0,1.18022;EPP=17287.9,4545.73;EPPR=7.35324;GTI=1;LEN=4,1;MEANALT=1.7766,2.2069;MQM=54.497,59.8834;MQMR=60;NS=94;NUMALT=2;ODDS=8.22461;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=72,0;PQR=0;PRO=0;QA=281985,74660;QR=72;RO=2;RPL=0,0;RPP=17287.9,4545.73;RPPR=7.35324;RPR=7960,2092;RUN=1,1;SAF=7960,2092;SAP=17287.9,4545.73;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:44:0,27,17:0:0:27,17:957,608:-127.033,-49.9345,-41.8067,-77.453,0,-72.3355	1/1:126:0,126,0:0:0:126,0:4465,0:-399.77,-37.9298,0,-399.77,-37.9298,-399.77	1/2:132:0,66,66:0:0:66,66:2345,2364:-383.123,-192.96,-173.092,-190.519,0,-170.651	1/1:184:0,183,1:0:0:183,1:6470,36:-580.493,-55.0885,0,-577.555,-51.7912,-577.254	1/2:72:0,42,30:0:0:42,30:1457,1080:-206.707,-88.4823,-75.8391,-118.578,0,-109.548	1/2:64:0,27,37:0:0:27,37:955,1324:-185.717,-108.316,-100.188,-77.7556,0,-66.6175	1/1:142:0,142,0:0:0:142,0:5056,0:-454.723,-42.7463,0,-454.723,-42.7463,-454.723	1/2:202:0,106,96:0:0:106,96:3751,3421:-583.196,-279.015,-247.105,-304.536,0,-275.637	1/2:92:0,44,48:0:0:44,48:1555,1724:-267.271,-140.991,-127.746,-126.635,0,-112.185	1/2:140:0,62,78:0:0:62,78:2173,2785:-403.793,-227.409,-208.745,-176.737,0,-153.256	1/2:54:0,28,26:0:0:28,26:1003,936:-158.308,-76.7303,-68.3015,-81.9359,0,-74.1091	1/1:42:0,42,0:0:0:42,0:1494,0:-134.123,-12.6433,0,-134.123,-12.6433,-134.123	1/2:42:0,22,20:0:0:22,20:772,705:-120.076,-57.7522,-51.1295,-62.6743,0,-56.6537	1/2:65:0,36,29:0:0:36,29:1279,1025:-187.791,-83.8308,-72.9937,-104.314,0,-95.5843	1/1:32:0,32,0:0:0:32,0:1144,0:-103.223,-9.63296,0,-103.223,-9.63296,-103.223	1/2:29:0,10,19:0:0:10,19:360,684:-85.4336,-56.1708,-53.1605,-29.6219,0,-23.9023	1/1:49:0,49,0:0:0:49,0:1723,0:-154.782,-14.7505,0,-154.782,-14.7505,-154.782	1/1:34:0,34,0:0:0:34,0:1213,0:-108.706,-10.235,0,-108.706,-10.235,-108.706	1/1:22:0,22,0:0:0:22,0:787,0:-70.9405,-6.62266,0,-70.9405,-6.62266,-70.9405	1/1:189:0,187,2:0:0:187,2:6663,72:-597.114,-56.2926,0,-591.239,-50.0579,-590.637	1/2:154:0,87,67:0:0:87,67:3061,2400:-444.049,-196.074,-169.884,-248.329,0,-228.16	1/1:146:0,146,0:0:0:146,0:5163,0:-464.588,-43.9504,0,-464.588,-43.9504,-464.588	1/2:146:0,61,85:0:0:61,85:2165,3052:-425.004,-249.317,-230.954,-176.043,0,-150.456	1/2:127:0,69,58:0:0:69,58:2470,2054:-368.078,-167.394,-146.623,-201.04,0,-183.58	1/2:85:0,38,46:0:0:38,46:1339,1611:-239.633,-131.066,-119.627,-108.558,0,-94.7105	1/1:357:0,355,2:0:0:355,2:12443,72:-1117.48,-106.866,0,-1111.6,-100.631,-1111	1/1:242:0,241,1:0:0:241,1:8580,36:-769.864,-72.5482,0,-766.927,-69.251,-766.626	1/1:18:0,18,0:0:0:18,0:644,0:-58.2042,-5.41854,0,-58.2042,-5.41854,-58.2042	1/2:313:0,156,154:0:0:156,154:5532,5524:-900.277,-450.565,-403.604,-449.709,0,-403.35	1/2:220:0,89,131:0:0:89,131:3158,4696:-639.756,-383.174,-356.383,-256.937,0,-217.502	1/1:210:0,206,1:0:0:206,1:7244,36:-650.786,-62.0122,0,-647.849,-59.0747,-647.548	1/2:26:0,8,18:0:0:8,18:278,644:-75.4369,-52.8721,-50.4638,-22.915,0,-17.4965	1/1:32:0,32,0:0:0:32,0:1137,0:-102.358,-9.63296,0,-102.358,-9.63296,-102.358	1/2:21:0,12,9:0:0:12,9:421,324:-60.9626,-26.7962,-23.1838,-34.522,0,-31.8127	1/2:36:0,19,17:0:0:19,17:665,612:-103.986,-50.2959,-44.5764,-54.044,0,-48.9265	1/1:31:0,31,0:0:0:31,0:1100,0:-99.0513,-9.33193,0,-99.0513,-9.33193,-99.0513	1/2:120:0,65,55:0:0:65,55:2308,1980:-349.76,-161.917,-142.35,-188.2,0,-171.644	1/1:409:0,408,1:0:0:408,1:14407,36:-1291.69,-122.82,0,-1288.75,-119.523,-1288.45	1/1:50:0,50,0:0:0:50,0:1748,0:-155.657,-15.0515,0,-155.657,-15.0515,-155.657	1/2:8:0,1,7:0:0:1,7:36,252:-23.8545,-20.9217,-20.6207,-3.29214,0,-1.18493	1/1:146:0,146,0:0:0:146,0:5146,0:-461.667,-43.9504,0,-461.667,-43.9504,-461.667	1/1:34:0,34,0:0:0:34,0:1224,0:-110.055,-10.235,0,-110.055,-10.235,-110.055	1/2:165:0,78,87:0:0:78,87:2775,3089:-477.357,-252.048,-228.568,-225.664,0,-199.474	1/2:29:0,15,14:0:0:15,14:532,504:-84.7924,-41.4837,-36.9682,-43.6659,0,-39.4514	1/2:27:0,14,13:0:0:14,13:503,468:-79.5587,-38.5463,-34.3318,-41.3719,0,-37.4585	1/2:117:0,46,70:0:0:46,70:1610,2508:-335.285,-204.54,-190.693,-130.737,0,-109.665	1/2:172:1,83,88:1:36:83,88:2949,3137:-491.328,-252.767,-230.719,-235.92,0,-212.366	1/1:196:0,195,0:0:0:195,0:6889,0:-618.313,-58.7009,0,-618.313,-58.7009,-618.313	1/1:98:0,98,0:0:0:98,0:3480,0:-312.93,-29.5009,0,-312.93,-29.5009,-312.93	1/2:190:0,115,73:0:0:115,73:4080,2601:-544.006,-212.051,-177.432,-331.999,0,-310.024	1/2:231:0,104,127:0:0:104,127:3691,4511:-668.575,-367.925,-336.618,-301.005,0,-262.774	1/2:19:0,9,10:0:0:9,10:323,345:-54.6589,-28.3217,-25.6124,-26.689,0,-23.6787	1/1:157:0,157,0:0:0:157,0:5611,0:-502.345,-47.2617,0,-502.345,-47.2617,-502.345	1/1:54:0,54,0:0:0:54,0:1910,0:-171.809,-16.2556,0,-171.809,-16.2556,-171.809	1/2:34:0,22,12:0:0:22,12:779,413:-96.7538,-33.8855,-27.2628,-63.2148,0,-59.6025	1/2:210:0,103,107:0:0:103,107:3651,3802:-606.98,-310.166,-279.16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chr06	3908893	.	TTTTCC	AATTCT,ATTTCT	223741	PASS	AB=0.497171,0.496187;ABP=3.29289,3.52365;AC=145,43;AF=0.771277,0.228723;AN=188;AO=8015,2037;CIGAR=2X3M1X,1X4M1X;DP=10115;DPB=10115;DPRA=0,1.23307;EPP=15738.3,4102.39;EPPR=7.35324;GTI=0;LEN=6,6;MEANALT=2.21277,2.68519;MQM=54.6025,59.9445;MQMR=60;NS=94;NUMALT=2;ODDS=14.4754;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=282045,72430;QR=71;RO=2;RPL=197,38;RPP=15738.3,4102.39;RPPR=7.35324;RPR=7818,1999;RUN=1,1;SAF=8015,2037;SAP=17407.4,4426.3;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:45:0,30,15:0:0:30,15:1050,540:-128.784,-44.4211,-35.3902,-84.7184,0,-80.2029	1/1:129:0,129,0:0:0:129,0:4562,0:-408.41,-38.8329,0,-408.41,-38.8329,-408.41	1/2:131:0,65,65:0:0:65,65:2305,2292:-373.727,-186.497,-166.93,-187.297,0,-167.73	1/1:185:0,183,1:0:0:183,1:6426,36:-577.246,-55.0885,0,-574.308,-52.1006,-574.007	1/2:74:0,45,28:0:0:45,28:1580,1008:-210.651,-82.3248,-68.7784,-128.399,0,-119.97	1/2:62:0,27,34:0:0:27,34:929,1224:-175.081,-99.8726,-91.7447,-75.2003,0,-64.9653	1/1:143:0,143,0:0:0:143,0:5042,0:-453.496,-43.0473,0,-453.496,-43.0473,-453.496	1/2:199:0,106,92:0:0:106,92:3726,3295:-570.811,-268.815,-236.906,-302.091,0,-274.396	1/2:91:0,43,47:0:0:43,47:1533,1665:-260.353,-135.737,-122.792,-124.719,0,-110.571	1/2:142:0,63,78:0:0:63,78:2221,2770:-406.387,-225.783,-206.818,-180.681,0,-157.201	1/2:54:0,29,25:0:0:29,25:1032,894:-157.166,-73.252,-64.5222,-84.2701,0,-76.7443	1/1:41:0,41,0:0:0:41,0:1435,0:-128.775,-12.3422,0,-128.775,-12.3422,-128.775	1/2:42:0,21,20:0:0:21,20:732,707:-116.749,-57.5857,-51.264,-59.1651,0,-53.1445	1/2:64:0,37,27:0:0:37,27:1319,931:-183.269,-75.971,-64.8329,-107.647,0,-99.5195	1/1:32:0,31,0:0:0:31,0:1108,0:-99.6252,-9.33193,0,-99.6252,-9.33193,-99.6252	1/2:29:0,10,19:0:0:10,19:359,680:-84.9841,-55.8096,-52.7993,-29.5322,0,-23.8126	1/1:50:0,50,0:0:0:50,0:1761,0:-158.088,-15.0515,0,-158.088,-15.0515,-158.088	1/1:35:0,35,0:0:0:35,0:1251,0:-112.074,-10.5361,0,-112.074,-10.5361,-112.074	1/1:22:0,22,0:0:0:22,0:759,0:-68.4499,-6.62266,0,-68.4499,-6.62266,-68.4499	1/1:190:0,190,0:0:0:190,0:6724,0:-603.253,-57.1957,0,-603.253,-57.1957,-603.253	1/2:154:0,86,68:0:0:86,68:2979,2407:-437.306,-196.413,-170.524,-241.243,0,-220.773	1/1:146:0,146,0:0:0:146,0:5127,0:-461.44,-43.9504,0,-461.44,-43.9504,-461.44	1/2:143:0,62,81:0:0:62,81:2172,2902:-413.609,-237.028,-218.364,-176.935,0,-152.552	1/2:126:0,69,56:0:0:69,56:2420,1993:-358.771,-162.235,-141.463,-196.609,0,-179.751	1/2:83:0,38,45:0:0:38,45:1306,1586:-235.275,-129.48,-118.041,-106.142,0,-92.596	1/1:363:0,359,2:0:0:359,2:12488,72:-1121.47,-108.07,0,-1115.59,-102.168,-1114.99	1/1:244:0,243,1:0:0:243,1:8548,36:-767.225,-73.1503,0,-764.288,-69.853,-763.987	1/1:18:0,18,0:0:0:18,0:645,0:-58.2917,-5.41854,0,-58.2917,-5.41854,-58.2917	1/2:316:0,162,151:0:0:162,151:5715,5342:-899.517,-435.121,-386.355,-464.411,0,-418.955	1/2:216:0,91,123:0:0:91,123:3211,4401:-619.736,-358.952,-331.558,-260.857,0,-223.83	1/1:211:0,208,1:0:0:208,1:7278,36:-653.931,-62.6142,0,-650.993,-59.65,-650.692	1/2:26:0,8,18:0:0:8,18:286,636:-75.4355,-52.1495,-49.7413,-23.6417,0,-18.2232	1/1:32:0,32,0:0:0:32,0:1128,0:-101.553,-9.63296,0,-101.553,-9.63296,-101.553	1/2:21:0,12,9:0:0:12,9:431,316:-61.1273,-26.0694,-22.4571,-35.4119,0,-32.7026	1/2:36:0,18,17:0:0:18,17:621,597:-98.8716,-48.6586,-43.24,-50.2788,0,-45.1613	1/1:31:0,31,0:0:0:31,0:1088,0:-97.9867,-9.33193,0,-97.9867,-9.33193,-97.9867	1/2:124:0,69,55:0:0:69,55:2443,1967:-359.523,-160.748,-139.977,-199.131,0,-182.574	1/1:413:0,409,1:0:0:409,1:14363,36:-1288.18,-123.121,0,-1285.24,-120.169,-1284.94	1/1:50:0,49,0:0:0:49,0:1700,0:-151.023,-14.7505,0,-151.023,-14.7505,-151.023	1/2:8:0,1,7:0:0:1,7:35,252:-23.7645,-20.9217,-20.6207,-3.19354,0,-1.08633	1/1:148:0,148,0:0:0:148,0:5215,0:-468.035,-44.5524,0,-468.035,-44.5524,-468.035	1/1:36:0,34,0:0:0:34,0:1212,0:-108.753,-10.235,0,-108.753,-10.235,-108.753	1/2:165:0,79,86:0:0:79,86:2775,3045:-473.591,-248.39,-224.608,-225.553,0,-199.665	1/2:29:0,15,14:0:0:15,14:534,504:-84.9476,-41.4837,-36.9682,-43.8216,0,-39.6072	1/2:27:0,14,13:0:0:14,13:502,464:-79.1083,-38.1841,-33.9697,-41.2817,0,-37.3683	1/2:114:0,46,66:0:0:46,66:1622,2359:-324.238,-192.341,-178.493,-131.894,0,-112.026	1/2:173:1,86,85:1:36:86,85:3055,3018:-489.997,-242.983,-220.032,-244.391,0,-221.741	1/1:196:0,196,0:0:0:196,0:6868,0:-616.456,-59.0019,0,-616.456,-59.0019,-616.456	1/1:99:0,98,0:0:0:98,0:3421,0:-307.4,-29.5009,0,-307.4,-29.5009,-307.4	1/2:191:0,117,74:0:0:117,74:4117,2622:-548.633,-213.949,-178.728,-335.038,0,-312.761	1/2:226:0,103,122:0:0:103,122:3643,4339:-650.336,-353.679,-322.673,-296.73,0,-260.005	1/2:19:0,9,9:0:0:9,9:309,320:-51.2228,-26.148,-23.4387,-25.1384,0,-22.4291	1/1:162:0,162,0:0:0:162,0:5747,0:-514.77,-48.7669,0,-514.77,-48.7669,-514.77	1/1:54:0,54,0:0:0:54,0:1892,0:-170.489,-16.2556,0,-170.489,-16.2556,-170.489	1/2:35:0,22,13:0:0:22,13:778,453:-100.019,-37.1862,-30.5636,-63.1823,0,-59.2689	1/2:212:0,106,104:0:0:106,104:3723,3718:-605.551,-303.2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chr06	3934017	.	C	T	244945	PASS	AB=0.504008;ABP=3.67182;AC=147;AF=0.781915;AN=188;AO=8895;CIGAR=1X;DP=11273;DPB=11273;DPRA=0;EPP=128.511;EPPR=62.0224;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.8698;MQMR=59.9764;NS=94;NUMALT=1;ODDS=1.53371;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=317335;QR=84154;RO=2374;RPL=85;RPP=18587;RPPR=5062.98;RPR=8810;RUN=1;SAF=4891;SAP=195.079;SAR=4004;SRF=1323;SRP=70.6827;SRR=1051;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:23,37:23:804:37:1315:-100.326,0,-54.351	1/1:120:0,120:0:0:120:4277:-385.104,-36.1236,0	0/1:196:91,105:91:3226:105:3739:-277.71,0,-231.559	1/1:167:1,166:1:36:166:5907:-528.136,-46.6737,0	0/1:59:31,28:31:1112:28:1000:-72.5515,0,-82.6306	0/1:81:43,38:43:1536:38:1352:-97.5969,0,-114.15	1/1:119:1,118:1:36:118:4185:-373.225,-32.2243,0	0/1:223:102,121:102:3585:121:4340:-323.644,0,-255.731	0/1:116:62,54:62:2228:54:1920:-138.069,0,-165.864	0/1:111:61,50:61:2192:50:1780:-127.064,0,-164.131	0/1:135:66,69:66:2331:69:2455:-180.563,0,-169.411	1/1:181:0,181:0:0:181:6442:-579.865,-54.4864,0	0/1:200:100,100:100:3530:100:3579:-262.109,0,-257.704	0/1:215:109,106:109:3868:106:3756:-273.521,0,-283.594	1/1:145:1,144:1:36:144:5139:-459.049,-40.0511,0	0/1:173:95,78:95:3298:78:2760:-196.56,0,-244.96	1/1:191:0,191:0:0:191:6834:-614.126,-57.4967,0	1/1:127:0,127:0:0:127:4544:-409.125,-38.2308,0	1/1:118:0,118:0:0:118:4207:-378.807,-35.5215,0	1/1:140:0,140:0:0:140:5008:-450.863,-42.1442,0	0/1:133:63,70:63:2173:70:2503:-185.484,0,-155.794	1/1:44:0,44:0:0:44:1568:-141.41,-13.2453,0	0/1:77:40,37:40:1436:37:1324:-96.2818,0,-106.358	0/1:115:77,38:77:2744:38:1368:-88.7993,0,-212.392	0/1:61:31,30:31:1097:30:1076:-78.79,0,-80.6752	1/1:242:1,241:1:36:241:8598:-770.218,-69.251,0	1/1:258:0,258:0:0:258:9213:-828.885,-77.6657,0	1/1:70:0,70:0:0:70:2477:-223.18,-21.0721,0	0/1:193:96,97:96:3406:97:3464:-253.87,0,-248.657	0/1:91:47,44:47:1665:44:1558:-113.115,0,-122.742	1/1:91:2,89:2:68:89:3192:-281.045,-20.936,0	0/1:11:9,2:9:311:2:72:-3.52539,0,-25.0124	1/1:19:0,19:0:0:19:676:-61.1664,-5.71957,0	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:23:9,14:9:320:14:500:-38.4125,0,-22.2187	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	0/1:417:209,207:209:7355:207:7377:-538.532,0,-536.568	1/1:87:2,85:2:72:85:3016:-264.832,-19.3529,0	1/1:133:0,133:0:0:133:4732:-426.018,-40.037,0	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:125:0,125:0:0:125:4463:-401.835,-37.6288,0	1/1:90:0,90:0:0:90:3212:-289.299,-27.0927,0	0/1:118:60,58:60:2122:58:2052:-149.419,0,-155.726	0/1:148:70,78:70:2499:78:2808:-208.395,0,-180.61	0/1:138:62,76:62:2184:76:2713:-202.856,0,-155.282	0/1:55:17,38:17:604:38:1368:-106.864,0,-38.134	0/1:77:38,39:38:1364:39:1392:-102.4,0,-99.8814	1/1:127:0,127:0:0:127:4532:-408.04,-38.2308,0	1/1:60:1,59:1:36:59:2103:-185.929,-14.4635,0	0/1:124:66,58:66:2359:58:2080:-150.135,0,-175.24	0/1:95:31,63:31:1104:63:2244:-173.567,0,-71.0141	1/1:8:0,8:0:0:8:279:-25.4471,-2.40824,0	1/1:94:0,94:0:0:94:3317:-298.748,-28.2968,0	1/1:29:0,29:0:0:29:1020:-92.1122,-8.72987,0	1/1:16:1,15:1:36:15:540:-45.3383,-1.21821,0	0/1:126:55,71:55:1963:71:2536:-190.558,0,-139.015	1/1:53:0,53:0:0:53:1874:-168.911,-15.9546,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:14:2,12:2:72:12:419:-33.8279,0,-2.6223	0/1:100:54,46:54:1915:46:1648:-118.504,0,-142.524	1/1:215:2,212:2:72:212:7602:-677.285,-57.9435,0	0/1:16:2,14:2:68:14:500:-40.5197,0,-1.64123	1/1:110:1,109:1:36:109:3892:-346.873,-29.515,0	1/1:169:2,167:2:72:167:5963:-529.929,-44.0373,0	1/1:93:0,93:0:0:93:3317:-298.745,-27.9958,0	1/1:78:0,78:0:0:78:2770:-249.539,-23.4803,0	1/1:134:2,132:2:72:132:4693:-415.684,-33.5013,0	1/1:125:0,125:0:0:125:4414:-397.414,-37.6288,0	1/1:116:0,116:0:0:116:4137:-372.511,-34.9195,0	1/1:82:0,82:0:0:82:2944:-265.193,-24.6845,0	1/1:185:0,185:0:0:185:6603:-594.216,-55.6906,0	0/1:34:18,16:18:619:16:576:-41.94,0,-45.7968	1/1:108:0,108:0:0:108:3829:-344.719,-32.5112,0	0/1:86:35,51:35:1234:51:1820:-138.193,0,-85.4741	0/1:262:131,131:131:4700:131:4655:-340.154,0,-344.289	1/1:117:0,117:0:0:117:4184:-376.731,-35.2205,0	1/1:157:2,155:2:68:155:5514:-489.925,-40.804,0	1/1:115:0,115:0:0:115:4096:-368.824,-34.6185,0	0/1:23:14,9:14:500:9:320:-22.2187,0,-38.4125	1/1:112:1,111:1:36:111:3976:-354.431,-30.1171,0	1/1:115:0,115:0:0:115:4120:-370.966,-34.6185,0	1/1:167:0,167:0:0:167:5976:-537.859,-50.272,0	1/1:158:1,157:1:36:157:5604:-501.563,-44.66,0	1/1:163:0,163:0:0:163:5794:-521.568,-49.0679,0	0/1:218:109,109:109:3907:109:3915:-286.752,0,-286.195	1/1:291:2,289:2:72:289:10300:-919.953,-80.763,0	0/1:69:39,30:39:1396:30:1080:-76.7413,0,-105.168	1/1:142:1,141:1:36:141:5029:-449.025,-39.148,0	1/1:171:0,171:0:0:171:6124:-551.257,-51.4761,0	1/1:183:0,183:0:0:183:6558:-590.208,-55.0885,0	0/1:202:91,111:91:3209:111:3950:-294.883,0,-228.227	0/1:130:83,47:83:2938:47:1688:-113.071,0,-225.519	1/1:77:0,77:0:0:77:2744:-247.199,-23.1793,0	1/1:259:2,257:2:72:257:9215:-822.455,-71.13,0
chr06	3934045	.	CGA	AGG,AGA	311226	PASS	AB=0.50665,0.490025;ABP=4.85867,7.16913;AC=147,41;AF=0.781915,0.218085;AN=188;AO=9010,2383;CIGAR=1X1M1X,1X2M;DP=11434;DPB=11437;DPRA=0,1.07129;EPP=177.138,71.9224;EPPR=6.91895;GTI=1;LEN=3,1;MEANALT=1.96809,2.25424;MQM=59.865,59.9895;MQMR=60;NS=94;NUMALT=2;ODDS=1.01107;PAIRED=0,0;PAIREDR=0;PAO=4.5,4.5;PQA=160,160;PQR=0;PRO=0;QA=316105,85141;QR=178;RO=5;RPL=8988,2375;RPP=19377.4,5108.38;RPPR=6.91895;RPR=22,8;RUN=1,1;SAF=4908,1321;SAP=159.577,64.1368;SAR=4102,1062;SRF=3;SRP=3.44459;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:61:0,37,24:0:0:37,24:1301,856:-176.035,-70.1364,-58.9983,-106.253,0,-99.0281	1/1:118:0,117,1:0:0:117,1:4090,36:-367.871,-35.2205,0,-364.934,-31.9233,-364.633	1/2:196:0,107,89:0:0:107,89:3740,3180:-563.812,-259.574,-227.363,-304.533,0,-277.741	1/1:169:0,168,1:0:0:168,1:5824,36:-523.922,-50.573,0,-520.984,-47.2758,-520.683	1/2:58:0,27,31:0:0:27,31:957,1116:-169.378,-91.4198,-83.292,-78.3147,0,-68.9828	1/2:87:0,40,47:0:0:40,47:1399,1655:-248.898,-135.085,-123.044,-114.164,0,-100.015	1/1:119:0,118,1:0:0:118,1:4122,36:-370.742,-35.5215,0,-367.805,-32.2243,-367.504	1/2:232:0,126,106:0:0:126,106:4462,3792:-673.038,-309.569,-271.64,-363.824,0,-331.915	1/2:116:0,53,62:0:0:53,62:1868,2220:-333.276,-181.188,-165.234,-152.229,0,-133.565	1/2:114:0,50,63:0:0:50,63:1757,2255:-326.89,-183.888,-168.836,-142.996,0,-124.032	1/2:141:0,71,70:0:0:71,70:2496,2495:-406.895,-203.731,-182.357,-203.518,0,-182.446	1/1:181:1,178,0:1:34:178,0:6277,0:-561.65,-50.8154,0,-561.951,-53.5833,-564.709	1/2:198:0,99,99:0:0:99,99:3502,3545:-574.686,-289.455,-259.653,-285.587,0,-255.785	1/2:222:0,109,110:0:0:109,110:3801,3935:-629.983,-320.871,-288.059,-309.108,0,-275.995	1/1:145:0,144,1:0:0:144,1:5103,36:-459.052,-43.3483,0,-456.115,-40.0511,-455.814	1/2:174:0,79,93:0:0:79,93:2758,3331:-495.977,-271.651,-247.87,-224.319,0,-196.323	1/1:188:0,188,0:0:0:188,0:6648,0:-597.888,-56.5936,0,-597.888,-56.5936,-597.888	1/1:126:0,126,0:0:0:126,0:4433,0:-399.141,-37.9298,0,-399.141,-37.9298,-399.141	1/1:121:0,119,0:0:0:119,0:4186,0:-376.643,-35.8226,0,-376.643,-35.8226,-376.643	1/1:143:0,143,0:0:0:143,0:5027,0:-452.58,-43.0473,0,-452.58,-43.0473,-452.58	1/2:140:0,73,66:0:0:73,66:2569,2360:-401.641,-192.511,-170.536,-209.204,0,-189.336	1/1:47:0,47,0:0:0:47,0:1646,0:-148.425,-14.1484,0,-148.425,-14.1484,-148.425	1/2:82:0,41,40:0:0:41,40:1408,1436:-231.452,-117.137,-104.794,-114.307,0,-102.266	1/2:115:0,39,76:0:0:39,76:1371,2692:-331.049,-219.455,-207.715,-111.946,0,-89.0681	1/2:62:0,29,33:0:0:29,33:1017,1176:-178.972,-96.2134,-87.4835,-83.1113,0,-73.1773	1/1:251:0,249,1:0:0:249,1:8740,36:-786.255,-74.9565,0,-783.317,-72.0091,-783.016	1/1:262:0,261,0:0:0:261,0:9140,0:-822.184,-78.5688,0,-822.184,-78.5688,-822.184	1/1:73:0,73,0:0:0:73,0:2565,0:-231.093,-21.9752,0,-231.093,-21.9752,-231.093	1/2:197:0,101,96:0:0:101,96:3500,3433:-564.736,-280.283,-249.879,-284.805,0,-255.907	1/2:90:0,44,45:0:0:44,45:1551,1620:-258.541,-132.262,-119.017,-126.352,0,-112.806	1/1:93:0,92,1:0:0:92,1:3209,36:-288.673,-27.6948,0,-285.736,-24.3975,-285.435	1/2:11:0,2,9:0:0:2,9:72,320:-32.3087,-26.4331,-25.831,-6.23466,0,-3.52539	1/1:19:0,19,0:0:0:19,0:682,0:-61.7083,-5.71957,0,-61.7083,-5.71957,-61.7083	1/2:9:0,5,4:0:0:5,4:165,144:-25.4325,-12.1095,-10.6043,-13.6695,0,-12.4654	1/2:24:0,15,9:0:0:15,9:517,324:-68.7821,-26.7966,-22.2811,-42.3396,0,-39.6303	1/1:34:0,34,0:0:0:34,0:1186,0:-107.043,-10.235,0,-107.043,-10.235,-107.043	1/2:423:1,214,208:1:36:214,208:7450,7434:-1208.61,-603.133,-541.65,-602.778,0,-543.102	1/1:93:0,91,2:0:0:91,2:3128,68:-281.403,-27.3937,0,-275.887,-21.5381,-275.285	1/1:138:0,137,0:0:0:137,0:4810,0:-432.802,-41.2411,0,-432.802,-41.2411,-432.802	1/2:4:0,2,2:0:0:2,2:70,72:-11.9251,-6.23466,-5.6326,-6.04527,0,-5.44321	1/1:124:0,124,0:0:0:124,0:4370,0:-393.476,-37.3277,0,-393.476,-37.3277,-393.476	1/1:94:0,94,0:0:0:94,0:3257,0:-293.351,-28.2968,0,-293.351,-28.2968,-293.351	1/2:122:0,60,62:0:0:60,62:2069,2228:-350.177,-182.12,-164.058,-168.409,0,-149.745	1/2:145:0,77,67:0:0:77,67:2736,2389:-417.678,-194.738,-171.559,-222.936,0,-202.767	1/2:138:0,77,61:0:0:77,61:2705,2188:-398.974,-178.823,-155.644,-220.506,0,-202.143	1/2:55:0,38,17:0:0:38,17:1358,608:-160.659,-49.9345,-38.4954,-111.082,0,-105.964	1/2:82:0,39,42:0:0:39,42:1381,1508:-235.504,-123.012,-111.271,-112.489,0,-99.8458	1/1:130:0,128,0:0:0:128,0:4461,0:-401.382,-38.5318,0,-401.382,-38.5318,-401.382	1/1:59:0,58,1:0:0:58,1:1988,36:-178.812,-17.4597,0,-175.874,-14.1625,-175.573	1/2:124:0,59,65:0:0:59,65:2075,2332:-359.471,-190.573,-172.812,-169.253,0,-149.686	1/2:97:0,66,31:0:0:66,31:2329,1100:-279.626,-89.9784,-70.1104,-190.001,0,-180.669	1/1:8:0,8,0:0:0:8,0:285,0:-25.994,-2.40824,0,-25.994,-2.40824,-25.994	1/1:93:0,93,0:0:0:93,0:3242,0:-292.004,-27.9958,0,-292.004,-27.9958,-292.004	1/1:29:0,29,0:0:0:29,0:992,0:-89.585,-8.72987,0,-89.585,-8.72987,-89.585	1/1:17:0,16,1:0:0:16,1:569,36:-51.183,-4.81648,0,-48.2453,-1.51924,-47.9443	1/2:129:0,75,54:0:0:75,54:2616,1935:-37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chr06	4157512	.	T	C	70824.8	PASS	AB=0.51826;ABP=20.4571;AC=44;AF=0.234043;AN=188;AO=3152;CIGAR=1X;DP=15054;DPB=15054;DPRA=1.17281;EPP=6847.49;EPPR=25579.3;GTI=0;LEN=1;MEANALT=1.04918;MQM=59.9527;MQMR=59.9927;NS=94;NUMALT=1;ODDS=4.47564;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111857;QR=424569;RO=11898;RPL=1912;RPP=314.115;RPPR=2300.47;RPR=1240;RUN=1;SAF=1912;SAP=314.115;SAR=1240;SRF=7693;SRP=2223.42;SRR=4205;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:16,8:16:568:8:275:-17.8588,0,-44.2271	0/0:319:317,2:317:11311:2:72:0,-89.1918,-1011.04	0/1:273:157,116:157:5581:116:4122:-288.982,0,-420.235	0/0:361:361,0:361:12923:0:0:0,-108.672,-1162.88	0/1:83:14,69:14:500:69:2471:-197.658,0,-20.3507	0/1:78:27,51:27:964:51:1811:-139.782,0,-63.5965	0/0:279:277,2:277:9856:2:72:0,-77.1506,-880.15	0/1:196:101,95:101:3601:95:3356:-243.235,0,-265.286	0/1:80:32,48:32:1133:48:1701:-129.292,0,-78.1943	0/1:188:86,102:86:3067:102:3610:-268.51,0,-219.665	0/1:149:81,68:81:2887:68:2424:-173.477,0,-215.213	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.27	0/1:42:20,22:20:712:22:769:-56.8853,0,-51.7634	0/1:169:94,75:94:3348:75:2672:-189.844,0,-250.664	0/0:122:122,0:122:4351:0:0:0,-36.7257,-391.763	0/1:96:42,53:42:1487:53:1896:-142.108,0,-105.313	0/0:57:56,0:56:1973:0:0:0,-16.8577,-177.483	0/0:26:26,0:26:916:0:0:0,-7.82678,-82.7565	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/0:356:355,1:355:12663:1:36:0,-103.568,-1135.9	0/1:249:105,144:105:3726:144:5106:-384.728,0,-260.584	0/0:168:167,1:167:5971:1:36:0,-46.9748,-533.899	0/1:84:42,42:42:1512:42:1512:-111.088,0,-111.088	0/1:216:117,99:117:4187:99:3527:-252.618,0,-311.984	0/1:134:60,74:60:2140:74:2629:-196.518,0,-152.528	0/0:473:471,2:471:16812:2:68:0,-135.929,-1506.28	0/0:422:422,0:422:15045:0:0:0,-127.035,-1353.78	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/1:462:211,251:211:7548:251:8867:-658.93,0,-540.285	0/1:338:203,135:203:7234:135:4802:-330.589,0,-549.369	0/0:211:210,1:210:7500:1:36:0,-59.9191,-671.447	0/1:27:17,10:17:603:10:347:-23.4358,0,-46.4717	0/0:38:38,0:38:1356:0:0:0,-11.4391,-122.34	0/1:8:3,5:3:108:5:171:-13.3172,0,-7.66693	0/1:17:9,8:9:324:8:280:-20.4218,0,-24.3883	0/0:13:13,0:13:459:0:0:0,-3.91339,-41.6441	0/1:284:149,135:149:5332:135:4800:-346.662,0,-394.521	0/0:289:287,1:287:10251:1:36:0,-83.4582,-918.917	0/0:50:50,0:50:1778:0:0:0,-15.0515,-160.301	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:361:361,0:361:12910:0:0:0,-108.672,-1161.72	0/0:91:91,0:91:3235:0:0:0,-27.3937,-291.373	0/1:332:138,193:138:4893:193:6866:-517.997,0,-340.525	0/1:94:47,47:47:1673:47:1667:-122.02,0,-122.558	0/1:79:32,47:32:1136:47:1622:-122.483,0,-78.7675	0/1:158:74,84:74:2647:84:2962:-219.225,0,-190.913	0/1:118:55,63:55:1968:63:2230:-165.44,0,-141.874	0/0:373:371,2:371:13244:2:72:0,-105.447,-1184.87	0/0:230:229,1:229:8156:1:36:0,-65.6386,-730.46	0/1:272:121,151:121:4335:151:5379:-402.36,0,-308.444	0/1:300:148,152:148:5307:152:5388:-394.743,0,-387.454	0/1:31:17,14:17:608:14:504:-36.3662,0,-45.7201	0/0:198:198,0:198:7069:0:0:0,-59.6039,-636.271	0/0:80:80,0:80:2857:0:0:0,-24.0824,-257.366	0/1:29:11,18:11:392:18:640:-49.1994,0,-26.8902	0/1:279:130,149:130:4644:149:5318:-394.767,0,-334.136	0/0:74:74,0:74:2640:0:0:0,-22.2762,-237.847	0/1:24:17,7:17:612:7:248:-15.4395,0,-48.1887	0/1:23:15,8:15:536:8:288:-19.3437,0,-41.6511	0/1:133:75,58:75:2684:58:2041:-143.922,0,-201.768	0/0:195:195,0:195:6996:0:0:0,-58.7008,-629.701	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	0/0:289:289,0:289:10332:0:0:0,-86.9977,-929.803	0/0:313:311,2:311:11092:2:72:0,-87.3857,-991.338	0/0:140:140,0:140:5007:0:0:0,-42.1442,-450.777	0/0:164:159,5:159:5658:5:180:0,-32.8169,-492.791	0/0:184:182,2:182:6480:2:63:0,-49.4064,-577.218	0/0:272:271,1:271:9630:1:36:0,-78.2819,-863.058	0/0:75:75,0:75:2675:0:0:0,-22.5772,-240.995	0/0:122:122,0:122:4326:0:0:0,-36.7257,-389.519	0/0:125:125,0:125:4475:0:0:0,-37.6287,-402.919	0/1:47:27,20:27:968:20:707:-49.8062,0,-73.289	0/0:160:159,1:159:5695:1:36:0,-44.5665,-509.069	0/1:103:48,55:48:1699:55:1952:-144.947,0,-122.189	0/1:237:113,124:113:4039:124:4392:-324.104,0,-292.354	0/0:277:277,0:277:9882:0:0:0,-83.3853,-889.323	0/0:97:97,0:97:3466:0:0:0,-29.1999,-312.151	0/0:119:118,1:118:4185:1:36:0,-32.2243,-373.235	0/1:11:7,4:7:252:4:140:-9.63325,0,-19.7176	0/0:188:188,0:188:6728:0:0:0,-56.5936,-605.595	0/0:166:166,0:166:5900:0:0:0,-49.971,-531.113	0/0:387:387,0:387:13848:0:0:0,-116.499,-1246.09	0/0:159:159,0:159:5673:0:0:0,-47.8638,-510.689	0/0:106:106,0:106:3782:0:0:0,-31.9092,-340.579	0/1:134:59,75:59:2098:75:2666:-199.847,0,-148.75	0/0:199:197,2:197:7010:2:72:0,-53.0682,-624.131	0/1:40:18,22:18:644:22:788:-59.2036,0,-46.2494	0/0:34:34,0:34:1203:0:0:0,-10.235,-108.575	0/0:38:38,0:38:1338:0:0:0,-11.4391,-120.718	0/0:151:151,0:151:5396:0:0:0,-45.4555,-485.763	0/1:239:105,134:105:3755:134:4747:-355.444,0,-266.203	0/1:124:48,76:48:1724:76:2701:-206.005,0,-118.118	0/0:169:166,3:166:5916:3:108:0,-40.7989,-522.474	0/0:176:176,0:176:6300:0:0:0,-52.9813,-567.093
chr06	4311663	.	A	C	30433.5	PASS	AB=0.511687;ABP=7.22299;AC=44;AF=0.234043;AN=188;AO=1825;CIGAR=1X;DP=9117;DPB=9117;DPRA=0.79001;EPP=3965.95;EPPR=15830.9;GTI=1;LEN=1;MEANALT=1.02041;MQM=59.9408;MQMR=59.9905;NS=94;NUMALT=1;ODDS=4.27176;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=64955;QR=261177;RO=7289;RPL=1825;RPP=3965.95;RPPR=15830.9;RPR=0;RUN=1;SAF=0;SAP=3965.95;SAR=1825;SRF=0;SRP=15830.9;SRR=7289;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:46:24,22:24:860:22:764:-55.2281,0,-63.8745	0/0:82:82,0:82:2932:0:0:0,-24.6845,-264.115	0/1:169:93,76:93:3325:76:2689:-191.381,0,-248.365	0/0:254:253,0:253:9072:0:0:0,-76.1606,-816.243	0/1:64:14,50:14:500:50:1781:-141.305,0,-26.0703	0/1:26:17,9:17:608:9:309:-20.3148,0,-47.2252	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/1:80:38,42:38:1360:42:1478:-109.229,0,-98.6182	0/1:65:33,32:33:1184:32:1144:-83.4749,0,-87.3014	0/1:65:38,27:38:1368:27:957:-66.8769,0,-103.854	0/1:94:59,35:59:2120:35:1260:-85.4087,0,-162.772	0/0:129:129,0:129:4628:0:0:0,-38.8329,-416.682	0/1:115:63,52:63:2256:52:1851:-132.251,0,-168.684	0/1:89:62,27:62:2211:27:968:-60.6457,0,-172.463	0/0:87:87,0:87:3132:0:0:0,-26.1896,-282.105	0/1:69:35,34:35:1260:34:1201:-87.6226,0,-92.9344	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:49:49,0:49:1755:0:0:0,-14.7505,-158.233	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/0:236:233,3:233:8322:3:108:0,-60.9679,-738.911	0/1:103:52,51:52:1860:51:1807:-131.903,0,-136.674	0/0:128:128,0:128:4584:0:0:0,-38.5318,-412.725	0/1:152:65,87:65:2336:87:3090:-232.569,0,-164.743	0/1:56:25,31:25:892:31:1108:-83.1733,0,-63.742	0/1:68:32,36:32:1148:36:1279:-94.7137,0,-83.1598	0/0:189:189,0:189:6784:0:0:0,-56.8947,-610.63	0/0:238:238,0:238:8540:0:0:0,-71.6451,-768.596	0/0:34:33,1:33:1175:1:36:0,-6.63674,-102.459	0/1:287:137,150:137:4920:150:5342:-394.518,0,-356.553	0/1:90:35,55:35:1256:55:1980:-151.382,0,-86.2526	0/0:124:124,0:124:4448:0:0:0,-37.3277,-400.49	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/0:40:40,0:40:1413:0:0:0,-12.0412,-127.465	0/1:14:3,11:3:104:11:396:-31.7683,0,-5.48839	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	0/0:41:41,0:41:1441:0:0:0,-12.3422,-129.984	0/1:216:100,116:100:3588:116:4156:-309.2,0,-258.104	0/0:108:108,0:108:3849:0:0:0,-32.5112,-346.606	0/0:84:84,0:84:3016:0:0:0,-25.2865,-271.67	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:138:138,0:138:4956:0:0:0,-41.5421,-446.188	0/0:55:55,0:55:1980:0:0:0,-16.5566,-178.474	0/1:182:90,92:90:3217:92:3272:-239.911,0,-234.963	0/1:73:34,39:34:1224:39:1396:-103.964,0,-88.4919	0/1:70:31,39:31:1108:39:1383:-103.696,0,-78.9589	0/1:93:31,62:31:1112:62:2201:-170.358,0,-72.3956	0/1:156:62,94:62:2207:94:3331:-253.044,0,-151.934	0/0:221:220,0:220:7889:0:0:0,-66.2266,-709.736	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/1:71:45,26:45:1616:26:928:-62.4651,0,-124.357	0/1:129:72,57:72:2584:57:2036:-144.679,0,-193.976	0/1:15:4,11:4:144:11:381:-30.1051,0,-8.79817	0/0:131:131,0:131:4704:0:0:0,-39.4349,-423.518	0/0:71:71,0:71:2529:0:0:0,-21.3731,-227.86	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:227:92,134:92:3292:134:4774:-361.422,0,-227.617	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/1:19:4,15:4:144:15:532:-42.4935,0,-7.59405	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/1:82:48,34:48:1724:34:1183:-82.085,0,-130.761	0/0:145:145,0:145:5195:0:0:0,-43.6493,-467.688	0/1:8:2,6:2:72:6:212:-17.0166,0,-4.42848	0/0:169:169,0:169:6048:0:0:0,-50.8741,-544.424	0/0:115:115,0:115:4132:0:0:0,-34.6184,-372.062	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/0:82:82,0:82:2936:0:0:0,-24.6845,-264.474	0/0:176:174,2:174:6217:2:72:0,-46.3105,-552.955	0/0:155:155,0:155:5533:0:0:0,-46.6596,-498.095	0/0:91:91,0:91:3242:0:0:0,-27.3937,-292.001	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/1:17:7,10:7:248:10:360:-27.6268,0,-17.5467	0/0:117:117,0:117:4175:0:0:0,-35.2205,-375.933	0/1:67:36,31:36:1296:31:1078:-77.1562,0,-96.7749	0/1:117:77,40:77:2772:40:1436:-94.3172,0,-214.5	0/0:216:216,0:216:7752:0:0:0,-65.0225,-697.709	0/0:95:95,0:95:3416:0:0:0,-28.5978,-307.653	0/0:104:103,1:103:3704:1:36:0,-27.7088,-329.962	0/1:8:4,4:4:140:4:144:-10.9054,0,-10.5363	0/0:115:114,1:114:4088:1:36:0,-31.0202,-364.507	0/0:113:113,0:113:4060:0:0:0,-34.0164,-365.586	0/0:178:178,0:178:6373:0:0:0,-53.5833,-573.658	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/0:68:68,0:68:2448:0:0:0,-20.47,-220.574	0/1:50:25,25:25:900:25:900:-66.2695,0,-66.2695	0/0:155:155,0:155:5550:0:0:0,-46.6596,-499.623	0/1:31:19,12:19:684:12:428:-29.5269,0,-52.5584	0/0:101:101,0:101:3627:0:0:0,-30.404,-326.547	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/0:67:67,0:67:2391:0:0:0,-20.169,-215.447	0/1:131:75,56:75:2683:56:2008:-141.558,0,-202.279	0/1:103:36,67:36:1287:67:2404:-185.61,0,-85.1267	0/0:119:119,0:119:4272:0:0:0,-35.8226,-384.657	0/0:140:140,0:140:5011:0:0:0,-42.1442,-451.136
chr06	4358138	.	G	A	349804	PASS	AB=0.456909;ABP=272.869;AC=144;AF=0.765957;AN=188;AO=17465;CIGAR=1X;DP=26592;DPB=26592;DPRA=0;EPP=37927.8;EPPR=19815.5;GTI=8;LEN=1;MEANALT=1.03191;MQM=53.5908;MQMR=59.6917;NS=94;NUMALT=1;ODDS=1.01604;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=626026;QR=326078;RO=9124;RPL=0;RPP=37927.8;RPPR=19815.5;RPR=17465;RUN=1;SAF=17465;SAP=37927.8;SAR=0;SRF=9124;SRP=19815.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:91:53,38:53:1869:38:1368:-95.7168,0,-141.054	1/1:77:0,77:0:0:77:2756:-247.093,-23.1793,0	0/1:121:67,54:67:2383:54:1944:-138.189,0,-178.282	1/1:222:0,222:0:0:222:7958:-714.75,-66.8287,0	0/1:41:22,18:22:792:18:648:-46.1682,0,-59.2051	0/1:67:49,18:49:1764:18:648:-38.3354,0,-138.802	1/1:136:1,135:1:36:135:4819:-429.863,-37.3418,0	0/1:174:82,92:82:2918:92:3304:-243.124,0,-210.401	0/1:143:81,62:81:2888:62:2210:-155.223,0,-216.946	0/1:122:52,70:52:1856:70:2516:-189.803,0,-130.591	0/1:446:226,220:226:8064:220:7892:-574.79,0,-591.22	1/1:92:0,92:0:0:92:3289:-295.314,-27.6948,0	0/1:90:51,39:51:1823:39:1404:-99.2445,0,-137.241	0/1:78:48,30:48:1707:30:1072:-73.1794,0,-130.36	1/1:77:0,77:0:0:77:2760:-248.36,-23.1793,0	0/1:98:46,52:46:1644:52:1863:-137.92,0,-118.748	1/1:64:0,64:0:0:64:2273:-204.35,-19.2659,0	1/1:36:0,36:0:0:36:1292:-116.309,-10.8371,0	1/1:197:1,196:1:36:196:7028:-622.968,-55.7046,0	1/1:168:0,168:0:0:168:6017:-540.787,-50.573,0	0/1:212:112,100:112:3995:100:3575:-257.263,0,-295.908	1/1:122:0,122:0:0:122:4373:-393.081,-36.7257,0	0/1:218:109,109:109:3916:109:3905:-284.917,0,-286.998	0/1:72:25,47:25:896:47:1680:-129.392,0,-59.2754	0/1:115:69,46:69:2460:46:1652:-114.059,0,-187.036	1/1:202:0,202:0:0:202:7252:-652.156,-60.8081,0	1/1:286:0,286:0:0:286:10242:-919.596,-86.0946,0	1/1:21:0,21:0:0:21:756:-68.2667,-6.32163,0	0/1:249:141,108:141:5036:108:3865:-272.759,0,-378.423	0/1:189:101,88:101:3616:88:3152:-226.12,0,-268.733	1/1:137:1,136:1:36:136:4853:-432.436,-37.6428,0	0/1:1458:907,551:907:32417:551:19772:-1336.41,0,-2477.1	1/1:1330:6,1324:6:216:1324:47475:-4236.2,-380.579,0	0/1:1289:731,558:731:26098:558:19989:-1403.1,0,-1959.73	0/1:2135:1119,1015:1119:40019:1015:36411:-2618.42,0,-2954.93	1/1:1494:6,1488:6:212:1488:53309:-4753.68,-430.314,0	0/1:175:79,96:79:2823:96:3440:-256.974,0,-201.357	1/1:162:0,162:0:0:162:5799:-520.635,-48.7669,0	1/1:376:1,375:1:36:375:13430:-1199.91,-109.589,0	0/1:788:421,367:421:15028:367:13152:-943.149,0,-1114.89	1/1:91:0,91:0:0:91:3264:-293.138,-27.3937,0	1/1:226:1,225:1:36:225:8089:-722.817,-64.4345,0	0/1:192:96,96:96:3411:96:3444:-251.438,0,-249.173	0/1:46:21,25:21:756:25:900:-67.4026,0,-54.5151	0/1:58:28,30:28:996:30:1080:-79.8992,0,-72.4951	0/1:180:106,74:106:3788:74:2648:-183.834,0,-286.931	0/1:123:78,45:78:2792:45:1616:-108.159,0,-214.479	1/1:269:4,265:4:144:265:9500:-840.661,-67.6635,0	1/1:94:0,94:0:0:94:3376:-302.859,-28.2968,0	0/1:64:34,30:34:1220:30:1080:-78.177,0,-90.8399	0/1:144:88,56:88:3143:56:2012:-137.879,0,-239.745	0/1:676:405,271:405:14484:271:9697:-667.75,0,-1099.7	1/1:137:0,137:0:0:137:4924:-441.761,-41.2411,0	1/1:76:0,76:0:0:76:2720:-244.817,-22.8783,0	0/1:717:353,364:353:12640:364:13065:-955.976,0,-920.943	0/1:213:140,73:140:5016:73:2628:-172.144,0,-387.448	1/1:77:0,77:0:0:77:2753:-247.659,-23.1793,0	0/1:741:414,327:414:14785:327:11729:-831.302,0,-1107.22	0/1:524:325,199:325:11611:199:7140:-484.04,0,-886.923	0/1:121:71,50:71:2540:50:1792:-124.663,0,-192.413	1/1:86:2,84:2:72:84:3016:-264.291,-19.0519,0	0/1:721:392,329:392:14016:329:11785:-841.987,0,-1044.03	1/1:51:0,51:0:0:51:1829:-164.477,-15.3525,0	1/1:150:2,148:2:68:148:5306:-470.597,-38.6993,0	1/1:78:2,76:2:72:76:2717:-237.4,-16.6436,0	1/1:75:0,75:0:0:75:2696:-242.706,-22.5773,0	1/1:167:5,162:5:176:162:5796:-504.683,-34.0894,0	1/1:218:0,218:0:0:218:7803:-700.927,-65.6245,0	1/1:628:0,628:0:0:628:22536:-2021.27,-189.047,0	1/1:54:0,54:0:0:54:1925:-173.103,-16.2556,0	1/1:33:0,33:0:0:33:1173:-105.786,-9.93399,0	0/1:669:347,322:347:12382:322:11534:-833.745,0,-912.018	1/1:165:0,165:0:0:165:5920:-530.797,-49.67,0	0/1:89:54,35:54:1931:35:1252:-85.9231,0,-147.266	0/1:198:114,84:114:4080:84:3009:-210.789,0,-307.776	1/1:159:0,159:0:0:159:5678:-510.042,-47.8638,0	1/1:123:1,122:1:36:122:4380:-388.663,-33.4284,0	1/1:78:3,75:3:108:75:2692:-231.851,-13.4052,0	0/1:1475:754,720:754:27005:720:25770:-1866.55,0,-1985.25	1/1:65:1,64:1:36:64:2304:-204.339,-16.8307,0	1/1:99:0,99:0:0:99:3544:-317.841,-29.802,0	1/1:277:1,276:1:36:276:9864:-881.801,-79.787,0	1/1:53:0,53:0:0:53:1904:-171.436,-15.9546,0	1/1:87:0,87:0:0:87:3123:-280.578,-26.1896,0	0/1:62:30,32:30:1076:32:1148:-84.8061,0,-78.4272	1/1:121:0,121:0:0:121:4339:-389.829,-36.4246,0	0/1:20:10,10:10:360:10:360:-26.6414,0,-26.7237	1/1:62:0,62:0:0:62:2211:-198.77,-18.6639,0	1/1:76:1,75:1:36:75:2690:-237.644,-19.28,0	1/1:692:1,691:1:36:691:24832:-2222.83,-204.714,0	0/1:1234:569,665:569:20310:665:23830:-1766.31,0,-1455.67	0/1:94:64,30:64:2296:30:1080:-69.0621,0,-178.332	1/1:4:0,4:0:0:4:144:-13.304,-1.20412,0	1/1:90:0,90:0:0:90:3236:-291.084,-27.0927,0
chr06	4410511	.	A	C,T	242668	PASS	AB=0.511936,0.487805;ABP=7.7792,7.9888;AC=145,43;AF=0.771277,0.228723;AN=188;AO=8978,1897;CIGAR=1X,1X;DP=10882;DPB=10882;DPRA=0,0.861008;EPP=18614.1,4010.15;EPPR=13.8677;GTI=1;LEN=1,1;MEANALT=1.58511,2.01887;MQM=59.9895,59.3727;MQMR=60;NS=94;NUMALT=2;ODDS=7.12939;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=319524,67644;QR=180;RO=5;RPL=102,13;RPP=18622.6,4010.15;RPPR=13.8677;RPR=8876,1884;RUN=1,1;SAF=8977,1897;SAP=19489.8,4122.29;SAR=1,0;SRF=5;SRP=13.8677;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:49:0,22,27:0:0:22,27:779,953:-141.411,-77.9555,-71.3328,-63.8094,0,-55.6816	1/1:230:0,230,0:0:0:230,0:8164,0:-734.78,-69.2369,0,-734.78,-69.2369,-734.78	1/2:165:0,82,83:0:0:82,83:2932,2957:-480.257,-241.184,-216.5,-239.43,0,-214.444	1/1:327:0,327,0:0:0:327,0:11613,0:-1045.05,-98.4368,0,-1045.05,-98.4368,-1045.05	1/2:91:0,35,56:0:0:35,56:1247,2001:-264.924,-163.282,-152.746,-101.998,0,-85.1403	1/2:51:0,27,24:0:0:27,24:968,864:-149.804,-70.8537,-62.7259,-79.3096,0,-72.0848	1/1:207:0,207,0:0:0:207,0:7369,0:-663.261,-62.3132,0,-663.261,-62.3132,-663.261	1/2:210:0,109,101:0:0:109,101:3900,3600:-611.783,-293.758,-260.946,-318.382,0,-287.978	1/2:96:0,52,44:0:0:52,44:1856,1572:-279.836,-128.526,-112.873,-151.666,0,-138.421	1/2:139:0,73,66:0:0:73,66:2615,2348:-404.965,-191.7,-169.725,-213.622,0,-193.754	1/2:35:0,14,21:0:0:14,21:500,752:-102.449,-61.6846,-57.4702,-41.1218,0,-34.8001	1/1:61:0,61,0:0:0:61,0:2181,0:-196.555,-18.3628,0,-196.555,-18.3628,-196.555	1/2:47:0,29,18:0:0:29,18:1044,644:-138.059,-52.8721,-44.1422,-85.5449,0,-80.1264	1/2:33:0,14,19:0:0:14,19:504,680:-96.8894,-55.7645,-51.5501,-41.4837,0,-35.7641	1/1:54:0,54,0:0:0:54,0:1919,0:-172.986,-16.2556,0,-172.986,-16.2556,-172.986	1/2:43:0,22,21:0:0:22,21:752,752:-122.599,-61.5773,-54.9547,-61.3715,0,-55.0498	1/1:38:0,38,0:0:0:38,0:1359,0:-122.61,-11.4391,0,-122.61,-11.4391,-122.61	1/1:36:0,36,0:0:0:36,0:1266,0:-114.241,-10.8371,0,-114.241,-10.8371,-114.241	1/1:31:0,31,0:0:0:31,0:1116,0:-100.752,-9.33193,0,-100.752,-9.33193,-100.752	1/1:290:0,290,0:0:0:290,0:10357,0:-932.051,-87.2987,0,-932.051,-87.2987,-932.051	1/2:182:0,88,94:0:0:88,94:3127,3339:-527.15,-272.338,-245.847,-255.167,0,-226.87	1/1:200:0,199,0:0:0:199,0:7089,0:-637.713,-59.905,0,-637.713,-59.905,-637.713	1/2:140:0,83,57:0:0:83,57:2942,1992:-401.855,-162.177,-137.191,-240.029,0,-222.87	1/2:163:0,95,68:0:0:95,68:3391,2425:-474.221,-197.77,-169.172,-276.807,0,-256.337	1/2:77:0,35,42:0:0:35,42:1248,1502:-224.49,-122.758,-112.222,-102.089,0,-89.4456	1/1:412:0,412,0:0:0:412,0:14622,0:-1315.74,-124.024,0,-1315.74,-124.024,-1315.74	1/1:244:0,244,0:0:0:244,0:8685,0:-781.646,-73.4513,0,-781.646,-73.4513,-781.646	1/1:17:0,17,0:0:0:17,0:604,0:-54.6906,-5.11751,0,-54.6906,-5.11751,-54.6906	1/2:301:0,134,167:0:0:134,167:4753,5953:-872.703,-485.465,-445.127,-387.593,0,-337.321	1/2:144:0,79,65:0:0:79,65:2817,2324:-419.251,-189.621,-165.84,-229.987,0,-210.42	1/1:211:0,208,2:0:0:208,2:7408,63:-666.452,-62.6142,0,-661.386,-57.5514,-660.784	1/2:20:0,9,11:0:0:9,11:320,392:-58.3851,-32.3078,-29.5985,-26.4331,0,-23.1218	1/1:50:0,50,0:0:0:50,0:1756,0:-158.321,-15.0515,0,-158.321,-15.0515,-158.321	1/2:15:0,8,7:0:0:8,7:288,252:-44.4211,-20.9217,-18.5135,-23.8592,0,-21.752	1/2:19:0,4,15:0:0:4,15:144,540:-56.1708,-44.4211,-43.217,-12.1095,0,-7.59405	1/1:23:0,23,0:0:0:23,0:824,0:-74.4833,-6.92369,0,-74.4833,-6.92369,-74.4833	1/2:143:0,87,56:0:0:87,56:3091,2016:-416.655,-164.784,-138.594,-252.229,0,-235.371	1/1:220:0,220,0:0:0:220,0:7838,0:-705.451,-66.2266,0,-705.451,-66.2266,-705.451	1/1:53:0,53,0:0:0:53,0:1895,0:-170.827,-15.9546,0,-170.827,-15.9546,-170.827	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:232:0,232,0:0:0:232,0:8249,0:-742.425,-69.839,0,-742.425,-69.839,-742.425	1/1:49:0,49,0:0:0:49,0:1743,0:-157.154,-14.7505,0,-157.154,-14.7505,-157.154	1/2:162:0,80,82:0:0:80,82:2842,2911:-469.031,-237.45,-213.368,-231.935,0,-207.251	1/2:80:0,46,34:0:0:46,34:1652,1220:-234.549,-99.7866,-85.9392,-135.121,0,-124.886	1/2:43:0,21,22:0:0:21,22:744,792:-125.571,-64.9649,-58.6433,-60.9627,0,-54.34	1/2:137:0,89,48:0:0:89,48:3173,1719:-399.139,-140.503,-113.711,-258.994,0,-244.544	1/2:153:0,74,79:0:0:74,79:2618,2823:-443.683,-230.449,-208.173,-213.59,0,-189.809	1/1:222:0,221,1:0:0:221,1:7853,36:-706.442,-66.5276,0,-703.504,-63.2304,-703.203	1/1:150:0,150,0:0:0:150,0:5326,0:-479.478,-45.1545,0,-479.478,-45.1545,-479.478	1/2:143:0,79,64:0:0:79,64:2792,2292:-414.658,-187.275,-163.494,-227.738,0,-208.472	1/2:194:0,97,97:0:0:97,97:3453,3480:-565.449,-284.024,-254.824,-281.782,0,-252.582	1/2:11:0,5,6:0:0:5,6:180,212:-32.3087,-17.6186,-16.1135,-15.0469,0,-13.2407	1/1:178:0,177,1:0:0:177,1:6311,36:-567.352,-53.2823,0,-564.414,-49.9851,-564.113	1/1:75:0,75,0:0:0:75,0:2679,0:-241.354,-22.5773,0,-241.354,-22.5773,-241.354	1/2:28:0,18,10:0:0:18,10:627,360:-80.7142,-29.734,-24.3155,-51.3359,0,-48.3256	1/2:121:0,58,63:0:0:58,63:2084,2218:-350.382,-180.367,-162.907,-170.37,0,-151.405	1/1:122:1,121,0:1:36:121,0:4314,0:-384.838,-33.1274,0,-385.139,-36.4246,-388.076	1/2:16:1,8,7:1:36:8,7:288,237:-39.4643,-16.2546,-16.7865,-20.5619,0,-21.3921	1/2:20:0,16,4:0:0:16,4:563,144:-57.934,-12.1095,-7.29302,-46.1827,0,-44.9786	1/2:85:0,55,30:0:0:55,30:1949,1076:-246.803,-88.0321,-71.4754,-159.127,0,-150.096	1/1:84:0,83,1:0:0:83,1:2935,36:-264.023,-24.9855,0,-261.086,-21.6882,-260.785	1/2:19:0,12,7:0:0:12,7:419,252:-54.9962,-20.9217,-17.3094,-34.4303,0,-32.3231	1/1:316:3,312,1:3:108:312,1:11099,36:-988.732,-85.1091,0,-986.698,-90.9839,-995.209	1/1:224:0,220,4:0:0:220,4:7837,140:-705.012,-66.2266,0,-693.622,-54.4865,-692.418	1/1:98:0,98,0:0:0:98,0:3488,0:-314.131,-29.5009,0,-314.131,-29.5009,-314.131	1/1:111:0,111,0:0:0:111,0:3963,0:-356.861,-33.4143,0,-356.861,-33.4143,-356.861	1/1:298:0,298,0:0:0:298,0:10581,0:-952.211,-89.7069,0,-952.211,-89.7069,-952.211	1/1:232:0,229,3:0:0:229,3:8141,108:-732.349,-68.9359,0,-723.536,-59.7638,-722.633	1/1:13:0,13,0:0:0:13,0:468,0:-42.4596,-3.91339,0,-42.4596,-3.91339,-42.4596	1/1:77:0,77,0:0:0:77,0:2743,0:-247.113,-23.1793,0,-247.113,-23.1793,-247.113	1/1:67:0,67,0:0:0:67,0:2380,0:-214.456,-20.169,0,-214.456,-20.169,-214.456	1/2:22:0,12,10:0:0:12,10:428,360:-64.5652,-29.6767,-26.0644,-35.2464,0,-32.2361	1/1:174:0,174,0:0:0:174,0:6178,0:-556.121,-52.3792,0,-556.121,-52.3792,-556.121	1/2:63:0,39,24:0:0:39,24:1376,860:-182.484,-70.4436,-58.7035,-112.397,0,-105.172	1/2:168:0,73,95:0:0:73,95:2612,3393:-489.979,-276.983,-255.008,-213.353,0,-184.755	1/1:210:0,209,1:0:0:209,1:7475,36:-672.435,-62.9153,0,-669.526,-59.6495,-669.225	1/1:147:0,147,0:0:0:147,0:5205,0:-468.592,-44.2514,0,-468.592,-44.2514,-468.592	1/1:103:0,102,1:0:0:102,1:3644,32:-327.836,-30.7051,0,-325.258,-27.8068,-324.957	1/2:24:0,4,20:0:0:4,20:144,712:-70.1364,-58.3861,-57.1819,-12.1095,0,-6.0889	1/1:134:0,134,0:0:0:134,0:4783,0:-430.628,-40.338,0,-430.628,-40.338,-430.628	1/1:124:0,124,0:0:0:124,0:4438,0:-399.591,-37.3277,0,-399.591,-37.3277,-399.591	1/1:295:0,295,0:0:0:295,0:10488,0:-943.842,-88.8039,0,-943.842,-88.8039,-943.842	1/1:84:0,84,0:0:0:84,0:3016,0:-271.67,-25.2865,0,-271.67,-25.2865,-271.67	1/1:39:0,39,0:0:0:39,0:1390,0:-125.399,-11.7402,0,-125.399,-11.7402,-125.399	1/2:58:0,32,26:0:0:32,26:1132,936:-168.875,-76.6758,-67.0428,-92.5556,0,-84.7288	1/1:98:0,96,2:0:0:96,2:3422,72:-307.834,-28.8989,0,-301.959,-22.6642,-301.357	1/2:29:0,17,12:0:0:17,12:603,428:-84.3694,-35.2431,-30.1256,-49.482,0,-45.8696	1/1:61:0,61,0:0:0:61,0:2146,0:-193.404,-18.3628,0,-193.404,-18.3628,-193.404	1/1:55:0,55,0:0:0:55,0:1948,0:-175.593,-16.5567,0,-175.593,-16.5567,-175.593	1/1:23:0,23,0:0:0:23,0:824,0:-74.4833,-6.92369,0,-74.4833,-6.92369,-74.4833	1/2:63:0,22,41:0:0:22,41:788,1438:-181.51,-117.243,-110.621,-64.6221,0,-52.2799	1/2:52:0,15,37:0:0:15,37:540,1328:-152.699,-108.638,-104.122,-44.4211,0,-33.283	1/1:148:0,148,0:0:0:148,0:5272,0:-474.619,-44.5524,0,-474.619,-44.5524,-474.619	1/1:77:0,77,0:0:0:77,0:2751,0:-247.832,-23.1793,0,-247.832,-23.1793,-247.832
chr06	4410525	.	GCTTTTGGTTTTGA	TCTTTTTGGTTTTGA	30059.3	PASS	AB=0.483698;ABP=12.0723;AC=44;AF=0.234043;AN=188;AO=1932;CIGAR=1X1M1I12M;DP=11072;DPB=11212.7;DPRA=0.845926;EPP=4198.29;EPPR=19598.4;GTI=2;LEN=15;MEANALT=1.98077;MQM=59.5373;MQMR=59.9997;NS=94;NUMALT=1;ODDS=2.01942;PAIRED=0;PAIREDR=0;PAO=12;PQA=395;PQR=0;PRO=2;QA=67309;QR=313165;RO=9028;RPL=1932;RPP=4198.29;RPPR=19607.1;RPR=0;RUN=1;SAF=1932;SAP=4198.29;SAR=0;SRF=9027;SRP=19598.4;SRR=1;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:23,27:23:782:27:917:-67.7853,0,-55.641	0/0:234:231,0:231:7987:0:0:0,-69.5379,-718.533	0/1:167:84,83:84:2873:83:2908:-211.564,0,-208.542	0/0:331:331,0:331:11488:0:0:0,-99.6409,-1033.85	0/1:92:37,54:37:1281:54:1883:-141.879,0,-87.8428	0/1:51:27,24:27:952:24:814:-58.2128,0,-70.6435	0/0:210:208,0:208:7250:0:0:0,-62.6142,-652.244	0/1:216:110,106:110:3832:106:3689:-266.828,0,-279.708	0/1:104:55,48:55:1904:48:1648:-117.266,0,-140.303	0/1:143:74,68:74:2541:68:2360:-169.523,0,-185.84	0/1:37:15,22:15:516:22:773:-58.7532,0,-35.6282	0/0:60:60,0:60:2073:0:0:0,-18.0618,-186.843	0/1:47:29,18:29:1007:18:638:-43.6003,0,-76.7929	0/1:34:14,20:14:473:20:699:-52.9511,0,-32.657	0/0:54:53,0:53:1859:0:0:0,-15.9546,-167.232	0/1:42:21,21:21:719:21:743:-54.5503,0,-52.3848	0/0:38:37,0:37:1260:0:0:0,-11.1381,-113.338	0/0:37:36,0:36:1257:0:0:0,-10.8371,-113.072	0/0:30:30,0:30:1059:0:0:0,-9.0309,-95.6225	0/0:296:292,0:292:10176:0:0:0,-87.9008,-915.456	0/1:186:90,95:90:3139:95:3288:-240.131,0,-226.736	0/0:202:201,0:201:6975:0:0:0,-60.507,-627.488	0/1:147:85,57:85:2908:57:1949:-132.591,0,-218.921	0/1:170:98,71:98:3437:71:2465:-170.621,0,-258.316	0/1:81:37,44:37:1270:44:1553:-115.588,0,-90.2142	0/0:415:410,0:410:14237:0:0:0,-123.422,-1280.81	0/0:246:243,0:243:8408:0:0:0,-73.1503,-756.435	0/0:19:19,0:19:644:0:0:0,-5.71957,-58.2784	0/1:311:139,171:139:4838:171:5958:-442.579,0,-341.923	0/1:143:77,65:77:2643:65:2256:-159.889,0,-195.026	0/0:213:211,2:211:7291:2:61:0,-58.3255,-650.484	0/1:20:8,11:8:285:11:387:-29.0863,0,-19.9156	0/0:52:52,0:52:1803:0:0:0,-15.6536,-162.553	0/1:16:9,7:9:316:7:244:-17.4824,0,-23.9625	1/1:19:2,17:2:60:17:578:-46.6399,-0.021312,0	0/0:23:23,0:23:789:0:0:0,-6.92369,-71.3256	0/1:145:89,54:89:3112:54:1875:-125.577,0,-236.918	0/0:221:215,0:215:7498:0:0:0,-64.7214,-674.541	0/0:55:55,0:55:1898:0:0:0,-16.5566,-171.097	0/0:4:4,0:4:141:0:0:0,-1.20412,-13.037	0/0:231:230,0:230:7986:0:0:0,-69.2369,-718.438	0/0:49:48,0:48:1672:0:0:0,-14.4494,-150.408	0/1:163:78,85:78:2719:85:2990:-220.171,0,-195.892	0/1:82:44,35:44:1532:35:1242:-87.8989,0,-114.032	0/1:43:20,23:20:683:23:809:-60.1676,0,-48.8438	0/1:142:88,51:88:3080:51:1784:-118.651,0,-235.257	0/1:152:72,78:72:2484:78:2750:-202.26,0,-178.376	0/0:227:223,1:223:7722:1:36:0,-64.1923,-691.452	0/0:154:154,0:154:5347:0:0:0,-46.3586,-481.385	0/1:146:76,68:76:2659:68:2355:-168.5,0,-195.853	0/1:199:98,97:98:3418:97:3436:-250.387,0,-248.817	0/1:10:5,5:5:178:5:175:-12.7998,0,-13.0741	0/0:178:178,0:178:6225:0:0:0,-53.5833,-560.367	0/0:73:73,0:73:2560:0:0:0,-21.9752,-230.654	0/1:31:20,11:20:691:11:396:-26.6508,0,-53.1793	0/1:124:60,63:60:2064:63:2217:-162.305,0,-148.68	0/0:125:121,0:121:4160:0:0:0,-36.4246,-374.299	0/1:17:9,8:9:319:8:268:-19.3275,0,-23.9343	0/1:20:16,4:16:542:4:125:-5.53884,0,-43.0813	0/1:85:53,31:53:1837:31:1083:-72.0865,0,-139.965	0/0:84:80,1:80:2752:1:36:0,-21.1417,-244.34	0/1:20:13,7:13:448:7:252:-17.0084,0,-34.6282	0/0:317:312,1:312:10833:1:36:0,-90.9784,-971.349	0/0:227:222,4:222:7739:4:134:0,-55.9972,-684.175	0/0:99:99,0:99:3423:0:0:0,-29.802,-308.295	0/0:112:111,0:111:3841:0:0:0,-33.4143,-345.537	0/0:312:307,0:307:10574:0:0:0,-92.4162,-951.302	0/0:237:231,3:231:7955:3:84:0,-62.8978,-708.162	0/0:12:12,0:12:421:0:0:0,-3.61236,-38.2248	0/0:76:75,0:75:2616:0:0:0,-22.5772,-235.333	0/0:71:70,0:70:2401:0:0:0,-21.0721,-215.99	0/1:21:11,9:11:365:9:309:-21.7546,0,-26.7956	0/0:179:178,0:178:6148:0:0:0,-53.5833,-553.088	0/1:62:38,24:38:1328:24:828:-56.1455,0,-101.156	0/1:173:73,97:73:2503:97:3381:-253.046,0,-174.086	0/0:211:210,1:210:7352:1:36:0,-59.9505,-658.187	0/0:154:152,0:152:5248:0:0:0,-45.7566,-472.189	0/0:105:104,1:104:3639:1:36:0,-28.0099,-324.126	0/1:24:4,20:4:142:20:697:-55.827,0,-5.90455	0/0:135:133,0:133:4654:0:0:0,-40.037,-418.675	0/0:125:124,0:124:4311:0:0:0,-37.3277,-387.82	0/0:305:300,0:300:10424:0:0:0,-90.309,-937.771	0/0:83:82,0:82:2868:0:0:0,-24.6845,-258.152	0/0:41:41,0:41:1433:0:0:0,-12.3422,-129.266	0/1:59:34,25:34:1153:25:883:-61.7182,0,-86.0628	0/0:98:95,2:95:3292:2:63:0,-23.535,-290.522	0/1:32:17,14:17:590:14:494:-35.0982,0,-43.7354	0/0:60:59,0:59:2020:0:0:0,-17.7608,-181.714	0/0:55:55,0:55:1910:0:0:0,-16.5566,-172.177	0/0:23:23,0:23:800:0:0:0,-6.92369,-72.3181	0/1:69:22,44:22:758:44:1495:-114.571,0,-48.3377	0/1:50:15,34:15:520:34:1193:-92.6615,0,-32.1052	0/0:151:150,0:150:5197:0:0:0,-45.1545,-467.53	0/0:78:76,0:76:2648:0:0:0,-22.8783,-238.211
chr06	4410604	.	GAAGA	AAAGA,AAAGG	176215	PASS	AB=0.508571,0.483143;ABP=5.24381,11.649;AC=145,43;AF=0.771277,0.228723;AN=188;AO=6931,1703;CIGAR=1X4M,1X3M1X;DP=8690;DPB=8690;DPRA=0,1.01506;EPP=15053.5,3701.03;EPPR=13.8677;GTI=2;LEN=1,5;MEANALT=2.04255,2.66667;MQM=46.9189,33.4839;MQMR=60;NS=94;NUMALT=2;ODDS=2.32961;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=245755,58245;QR=173;RO=5;RPL=0,0;RPP=15053.5,3701.03;RPPR=13.8677;RPR=6931,1703;RUN=1,1;SAF=0,0;SAP=15053.5,3701.03;SAR=6931,1703;SRF=0;SRP=13.8677;SRR=5;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:53:0,20,33:0:0:20,33:716,1107:-138.769,-80.9248,-74.9042,-58.1801,0,-48.2461	1/1:76:0,76,0:0:0:76,0:2698,0:-240.436,-22.8783,0,-240.436,-22.8783,-240.436	1/2:104:0,46,58:0:0:46,58:1632,1986:-275.446,-144.218,-130.37,-131.56,0,-114.101	1/1:160:0,159,0:0:0:159,0:5627,0:-500.044,-47.8638,0,-500.044,-47.8638,-500.044	1/2:74:0,44,29:0:0:44,29:1574,992:-199.85,-72.7807,-59.5354,-127.133,0,-118.403	1/2:64:0,38,26:0:0:38,26:1318,883:-169.752,-63.3779,-51.9388,-106.694,0,-98.8669	1/1:142:0,142,0:0:0:142,0:5014,0:-446.541,-42.7463,0,-446.541,-42.7463,-446.541	1/2:125:0,69,54:0:0:69,54:2456,1875:-332.729,-134.236,-113.465,-198.509,0,-182.253	1/2:94:0,36,58:0:0:36,58:1265,1989:-245.743,-143.554,-132.717,-102.522,0,-85.0618	1/2:80:0,40,38:0:0:40,38:1416,1305:-205.602,-91.338,-79.2968,-114.359,0,-102.92	1/2:70:0,38,32:0:0:38,32:1338,1101:-185.587,-77.8383,-66.3991,-108.072,0,-98.439	1/1:68:0,68,0:0:0:68,0:2436,0:-217.816,-20.47,0,-217.816,-20.47,-217.816	1/2:70:0,35,34:0:0:35,34:1228,1154:-183.465,-84.4943,-73.9583,-98.9887,0,-88.7536	1/2:68:0,38,29:0:0:38,29:1368,989:-181.23,-70.3724,-58.9332,-110.915,0,-102.185	1/1:60:0,60,0:0:0:60,0:2152,0:-192.212,-18.0618,0,-192.212,-18.0618,-192.212	1/2:43:0,23,20:0:0:23,20:820,688:-116.422,-50.1271,-43.2034,-66.625,0,-60.6044	1/1:74:0,74,0:0:0:74,0:2648,0:-236.629,-22.2762,0,-236.629,-22.2762,-236.629	1/1:57:0,57,0:0:0:57,0:1999,0:-178.372,-17.1587,0,-178.372,-17.1587,-178.372	1/1:55:0,55,0:0:0:55,0:1928,0:-172.154,-16.5567,0,-172.154,-16.5567,-172.154	1/1:151:0,150,1:0:0:150,1:5306,36:-471.766,-45.1545,0,-469.256,-42.3319,-468.955	1/2:99:0,43,54:0:0:43,54:1536,1822:-253.313,-129.21,-116.265,-124.146,0,-107.891	1/1:117:0,117,0:0:0:117,0:4165,0:-370.227,-35.2205,0,-370.227,-35.2205,-370.227	1/2:115:0,54,61:0:0:54,61:1905,2106:-301.605,-148.321,-132.065,-153.611,0,-135.248	1/2:138:0,73,63:0:0:73,63:2567,2205:-364.323,-157.399,-135.424,-206.995,0,-188.03	1/2:53:0,28,25:0:0:28,25:992,852:-141.575,-62.0036,-53.5747,-79.8982,0,-72.3724	1/1:313:0,311,0:0:0:311,0:10990,0:-974.584,-93.6203,0,-974.584,-93.6203,-974.584	1/1:153:0,152,0:0:0:152,0:5380,0:-480.002,-45.7566,0,-480.002,-45.7566,-480.002	1/1:32:0,32,0:0:0:32,0:1144,0:-102.265,-9.63296,0,-102.265,-9.63296,-102.265	1/2:208:0,117,89:0:0:117,89:4169,3016:-548.28,-213.738,-178.517,-334.599,0,-307.807	1/2:135:0,64,69:0:0:64,69:2288,2382:-355.236,-170.855,-151.589,-184.482,0,-163.711	1/1:132:0,128,2:0:0:128,2:4575,69:-407.355,-38.5318,0,-402.448,-33.5912,-401.845	1/2:12:0,6,6:0:0:6,6:216,214:-33.0907,-15.6446,-13.8384,-17.7829,0,-15.9767	1/1:22:0,22,0:0:0:22,0:783,0:-70.3163,-6.62266,0,-70.3163,-6.62266,-70.3163	1/2:6:0,1,5:0:0:1,5:36,168:-15.6164,-12.6933,-12.3922,-3.2724,0,-1.76725	1/2:12:0,4,8:0:0:4,8:144,278:-32.0921,-20.3959,-19.1918,-12.039,0,-9.63074	1/1:10:0,10,0:0:0:10,0:352,0:-31.819,-3.0103,0,-31.819,-3.0103,-31.819	1/2:188:0,93,95:0:0:93,95:3315,3278:-498.059,-231.485,-203.49,-266.902,0,-238.304	1/1:243:0,242,0:0:0:242,0:8566,0:-763.491,-72.8493,0,-763.491,-72.8493,-763.491	1/1:88:0,88,0:0:0:88,0:3123,0:-279.359,-26.4906,0,-279.359,-26.4906,-279.359	1/2:6:0,2,4:0:0:2,4:72,138:-16.1531,-10.3076,-9.70554,-6.18746,0,-4.98334	1/1:108:0,108,0:0:0:108,0:3840,0:-342.997,-32.5112,0,-342.997,-32.5112,-342.997	1/1:46:0,46,0:0:0:46,0:1636,0:-146.568,-13.8474,0,-146.568,-13.8474,-146.568	1/2:137:0,73,64:0:0:73,64:2602,2185:-365.836,-155.867,-133.892,-210.295,0,-191.029	1/2:61:0,39,21:0:0:39,21:1384,744:-160.278,-49.5674,-37.8272,-110.8,0,-104.478	1/2:59:0,35,24:0:0:35,24:1217,836:-157.24,-59.3383,-48.8023,-98.2239,0,-90.9992	1/2:103:0,65,38:0:0:65,38:2285,1264:-274.847,-91.151,-71.5841,-184.013,0,-172.574	1/2:139:0,58,77:0:0:58,77:2076,2645:-357.022,-188.924,-171.464,-168.127,0,-144.948	1/1:216:0,214,1:0:0:214,1:7573,27:-673.761,-64.4204,0,-671.72,-62.3617,-671.419	1/1:144:0,143,1:0:0:143,1:5079,36:-451.887,-43.0473,0,-449.377,-40.2247,-449.076	1/2:109:0,44,65:0:0:44,65:1579,2247:-286.272,-159.143,-145.897,-127.464,0,-107.897	1/2:197:0,92,102:0:0:92,102:3282,3437:-506.449,-242.788,-215.093,-263.723,0,-233.018	1/2:11:0,5,6:0:0:5,6:176,216:-29.5937,-15.3738,-13.8687,-14.5523,0,-12.7461	1/1:121:0,121,0:0:0:121,0:4306,0:-384.512,-36.4246,0,-384.512,-36.4246,-384.512	1/1:55:0,55,0:0:0:55,0:1948,0:-173.375,-16.5567,0,-173.375,-16.5567,-173.375	1/2:30:0,11,19:0:0:11,19:396,645:-79.1509,-47.1308,-43.8194,-32.3587,0,-26.6391	1/2:102:0,48,53:0:0:48,53:1705,1788:-266.091,-128.387,-113.938,-137.722,0,-121.767	1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chr06	4489879	.	C	A	101566	PASS	AB=0.531405;ABP=25.5144;AC=144;AF=0.765957;AN=188;AO=4764;CIGAR=1X;DP=6008;DPB=6008;DPRA=0;EPP=10339.2;EPPR=2689.13;GTI=3;LEN=1;MEANALT=1.03191;MQM=59.6851;MQMR=59.9855;NS=94;NUMALT=1;ODDS=2.71687;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=170142;QR=44128;RO=1241;RPL=4764;RPP=10347.9;RPPR=2697.81;RPR=0;RUN=1;SAF=4763;SAP=10339.2;SAR=1;SRF=1240;SRP=2689.13;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:18,12:18:627:12:432:-30.1739,0,-47.7235	1/1:54:0,54:0:0:54:1928:-173.78,-16.2556,0	0/1:63:37,26:37:1305:26:924:-64.5072,0,-98.7845	1/1:88:0,88:0:0:88:3143:-283.081,-26.4906,0	0/1:28:11,17:11:392:17:612:-46.9846,0,-27.1912	0/1:43:16,27:16:567:27:968:-74.4931,0,-38.4164	1/1:36:0,36:0:0:36:1284:-115.862,-10.8371,0	0/1:73:24,49:24:860:49:1752:-135.968,0,-55.7466	0/1:73:27,46:27:968:46:1656:-127.345,0,-65.4622	0/1:68:43,25:43:1535:25:884:-59.405,0,-117.972	0/1:38:18,20:18:644:20:708:-52.6061,0,-46.8515	1/1:54:0,54:0:0:54:1928:-173.78,-16.2556,0	0/1:58:30,28:30:1080:28:1004:-73.208,0,-80.0531	0/1:111:58,53:58:2068:53:1893:-137.228,0,-152.977	1/1:55:0,55:0:0:55:1968:-177.37,-16.5567,0	0/1:42:23,19:23:813:19:680:-48.8859,0,-60.8458	1/1:68:0,68:0:0:68:2435:-219.405,-20.47,0	1/1:50:0,49:0:0:49:1742:-156.627,-14.7505,0	1/1:49:0,49:0:0:49:1748:-157.584,-14.7505,0	1/1:84:0,84:0:0:84:3010:-270.881,-25.2865,0	0/1:213:89,124:89:3135:124:4403:-332.271,0,-218.256	1/1:50:0,50:0:0:50:1800:-162.278,-15.0515,0	0/1:191:106,85:106:3787:85:3031:-215.486,0,-283.532	0/1:60:36,24:36:1296:24:852:-58.9231,0,-98.8821	0/1:26:9,17:9:320:17:595:-45.9881,0,-21.3156	1/1:175:0,175:0:0:175:6239:-561.599,-52.6803,0	1/1:122:0,122:0:0:122:4345:-391.207,-36.7257,0	1/1:31:0,30:0:0:30:1076:-96.7931,-9.0309,0	0/1:128:56,72:56:1958:72:2592:-194.989,0,-137.957	0/1:48:26,22:26:932:22:784:-56.4206,0,-69.7494	1/1:108:0,108:0:0:108:3863:-347.851,-32.5112,0	0/1:6:2,4:2:72:4:144:-11.5027,0,-5.03054	1/1:10:0,10:0:0:10:352:-32.0169,-3.0103,0	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	1/1:8:0,8:0:0:8:279:-25.4475,-2.40824,0	0/1:158:77,81:77:2733:81:2912:-214.733,0,-198.649	1/1:108:0,108:0:0:108:3848:-346.499,-32.5112,0	1/1:55:0,55:0:0:55:1961:-176.725,-16.5567,0	0/1:4:1,3:1:32:3:108:-8.87105,0,-1.99519	1/1:58:0,58:0:0:58:2076:-187.111,-17.4597,0	1/1:43:0,43:0:0:43:1544:-139.233,-12.9443,0	0/1:91:30,61:30:1076:61:2176:-168.704,0,-69.7591	0/1:66:30,36:30:1063:36:1284:-95.9884,0,-76.1128	0/1:40:20,20:20:712:20:707:-51.9088,0,-52.3655	0/1:65:31,34:31:1107:34:1200:-88.7368,0,-80.3732	0/1:50:19,31:19:680:31:1104:-84.5911,0,-46.4777	1/1:81:0,81:0:0:81:2891:-260.423,-24.3834,0	1/1:59:0,59:0:0:59:2120:-191.058,-17.7608,0	0/1:47:26,21:26:936:21:756:-54.2188,0,-70.4111	0/1:85:22,63:22:788:63:2239:-176.182,0,-45.6572	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	1/1:84:0,84:0:0:84:3004:-270.558,-25.2865,0	1/1:27:1,26:1:36:26:936:-80.9575,-4.52954,0	0/1:15:7,8:7:237:8:288:-21.7437,0,-17.1436	0/1:63:33,30:33:1180:30:1076:-78.188,0,-87.5432	1/1:72:1,71:1:36:71:2533:-224.524,-18.0759,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/1:30:10,20:10:352:20:705:-54.7364,0,-22.9873	1/1:132:0,132:0:0:132:4708:-423.824,-39.736,0	0/1:9:6,3:6:207:3:108:-7.3659,0,-16.2576	1/1:85:0,85:0:0:85:3060:-275.602,-25.5876,0	1/1:164:0,164:0:0:164:5845:-526.063,-49.3689,0	1/1:37:0,37:0:0:37:1313:-118.464,-11.1381,0	1/1:40:1,39:1:36:39:1400:-122.7,-8.44293,0	1/1:128:3,125:3:95:125:4472:-393.775,-29.6676,0	1/1:46:1,45:1:36:45:1607:-141.314,-10.2491,0	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	1/1:25:0,25:0:0:25:892:-80.5997,-7.52575,0	1/1:66:0,66:0:0:66:2372:-213.737,-19.868,0	0/1:18:7,11:7:243:11:388:-29.8365,0,-16.7889	1/1:82:0,82:0:0:82:2923:-263.279,-24.6845,0	0/1:40:23,17:23:815:17:603:-42.5583,0,-61.6296	0/1:248:125,123:125:4446:123:4402:-320.694,0,-325.657	1/1:76:0,76:0:0:76:2688:-242.154,-22.8783,0	1/1:67:0,67:0:0:67:2394:-215.703,-20.169,0	1/1:32:0,32:0:0:32:1139:-102.817,-9.63296,0	0/1:18:15,3:15:524:3:108:-4.65663,0,-42.0711	1/1:35:0,35:0:0:35:1256:-113.344,-10.5361,0	1/1:48:0,48:0:0:48:1694:-152.714,-14.4494,0	1/1:65:1,64:1:36:64:2279:-201.771,-15.9687,0	1/1:98:0,97:0:0:97:3459:-311.125,-29.1999,0	1/1:37:1,36:1:36:36:1279:-111.794,-7.53984,0	0/1:53:21,32:21:752:32:1140:-86.8936,0,-52.0517	1/1:125:0,125:0:0:125:4467:-402.178,-37.6288,0	0/1:33:14,19:14:495:19:684:-51.9481,0,-34.949	1/1:80:1,79:1:36:79:2824:-250.778,-20.4841,0	1/1:51:0,51:0:0:51:1828:-164.784,-15.3525,0	1/1:64:0,64:0:0:64:2299:-207.158,-19.2659,0	0/1:108:36,72:36:1288:72:2575:-199.444,0,-83.7054	0/1:52:32,20:32:1144:20:720:-49.4752,0,-87.616	1/1:59:0,59:0:0:59:2103:-189.533,-17.7608,0	1/1:76:0,76:0:0:76:2727:-245.659,-22.8783,0
chr06	4514436	.	A	G	30339.7	PASS	AB=0.483412;ABP=12.0873;AC=44;AF=0.234043;AN=188;AO=1846;CIGAR=1X;DP=8683;DPB=8683;DPRA=1.08041;EPP=4011.55;EPPR=14821.1;GTI=2;LEN=1;MEANALT=1.16981;MQM=59.9724;MQMR=59.9664;NS=94;NUMALT=1;ODDS=3.53977;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65812;QR=244602;RO=6824;RPL=0;RPP=4011.55;RPPR=14821.1;RPR=1846;RUN=1;SAF=1846;SAP=4011.55;SAR=0;SRF=6824;SRP=14821.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:30,51:30:1080:51:1801:-137.987,0,-73.1298	0/0:86:86,0:86:3088:0:0:0,-25.8886,-278.147	0/1:104:46,58:46:1656:58:2064:-153.947,0,-118.021	0/0:225:225,0:225:8061:0:0:0,-67.7317,-725.467	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	0/1:45:26,19:26:932:19:661:-46.2653,0,-70.6525	0/0:59:58,1:58:2076:1:36:0,-14.1625,-183.51	0/1:252:146,106:146:5252:106:3754:-262.2,0,-396.954	0/1:179:103,72:103:3700:72:2572:-178.699,0,-280.171	0/1:99:62,37:62:2217:37:1332:-90.3804,0,-169.905	0/1:49:22,27:22:792:27:972:-73.0474,0,-56.8552	0/0:114:114,0:114:4092:0:0:0,-34.3174,-368.429	0/1:90:56,34:56:2012:34:1212:-82.2936,0,-154.259	0/1:73:39,34:39:1400:34:1224:-88.4919,0,-104.279	0/0:103:103,0:103:3700:0:0:0,-31.0061,-333.199	0/1:63:27,36:27:953:36:1284:-96.8985,0,-67.1184	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/0:161:161,0:161:5765:0:0:0,-48.4658,-518.963	0/1:487:252,235:252:8999:235:8413:-610.567,0,-663.277	0/0:68:68,0:68:2432:0:0:0,-20.47,-219.135	0/1:117:61,56:61:2181:56:2004:-145.413,0,-161.334	0/1:46:29,17:29:1040:17:593:-39.8473,0,-80.067	0/1:54:25,29:25:900:29:1029:-76.6655,0,-65.0547	0/0:231:231,0:231:8284:0:0:0,-69.5379,-745.566	0/0:196:196,0:196:7017:0:0:0,-59.0019,-631.589	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/1:184:103,81:103:3688:81:2904:-206.206,0,-276.733	0/1:82:39,43:39:1400:43:1540:-114.209,0,-101.615	0/0:131:131,0:131:4673:0:0:0,-39.4349,-420.731	0/1:10:2,8:2:68:8:284:-22.8931,0,-3.44741	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:11:2,9:2:72:9:324:-26.1945,0,-3.52539	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:150:94,56:94:3372:56:1989:-134.128,0,-258.541	0/0:88:88,0:88:3145:0:0:0,-26.4906,-283.274	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.921	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/0:86:85,0:85:3044:0:0:0,-25.5875,-273.812	0/0:33:32,0:32:1144:0:0:0,-9.63296,-102.948	0/1:207:110,96:110:3918:96:3424:-246,0,-290.438	0/1:71:35,36:35:1248:36:1292:-95.2106,0,-91.2517	0/1:63:42,21:42:1512:21:756:-49.4023,0,-117.407	0/1:125:68,57:68:2428:57:2029:-145.252,0,-181.147	0/1:107:48,58:48:1728:58:2080:-155.232,0,-123.574	0/0:178:177,1:177:6330:1:36:0,-49.9851,-566.188	0/0:71:70,1:70:2508:1:36:0,-17.7749,-222.374	0/1:97:46,51:46:1656:51:1832:-135.961,0,-120.126	0/1:66:37,28:37:1324:28:1008:-71.1096,0,-99.5354	0/1:8:5,3:5:165:3:108:-7.66693,0,-12.7654	0/0:68:66,2:66:2364:2:68:0,-14.0123,-206.561	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:95:48,47:48:1728:47:1676:-122.529,0,-127.207	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/1:11:3,8:3:104:8:288:-22.9561,0,-6.39148	0/1:9:5,4:5:176:4:140:-10.2353,0,-13.4757	0/1:79:42,37:42:1500:37:1320:-95.3206,0,-111.505	0/0:89:89,0:89:3200:0:0:0,-26.7917,-288.217	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3353	0/0:119:119,0:119:4272:0:0:0,-35.8226,-384.657	0/0:137:137,0:137:4916:0:0:0,-41.2411,-442.545	0/0:77:77,0:77:2753:0:0:0,-23.1793,-248.009	0/0:98:98,0:98:3497:0:0:0,-29.5009,-314.94	0/0:274:273,1:273:9793:1:36:0,-78.8839,-877.713	0/0:135:134,1:134:4805:1:36:0,-37.0408,-429.002	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:44:44,0:44:1569:0:0:0,-13.2453,-141.5	0/1:35:8,27:8:273:27:945:-74.8262,0,-14.3641	0/0:53:53,0:53:1896:0:0:0,-15.9546,-170.918	0/1:82:34,48:34:1212:48:1704:-128.961,0,-84.7019	0/1:229:95,133:95:3408:133:4677:-352.096,0,-237.939	0/0:151:149,1:149:5360:1:36:0,-41.9161,-478.929	0/0:131:131,0:131:4696:0:0:0,-39.4349,-422.799	0/0:122:122,0:122:4368:0:0:0,-36.7257,-393.294	0/1:39:17,21:17:608:21:756:-56.5683,0,-43.2532	0/0:104:104,0:104:3732:0:0:0,-31.3071,-336.08	0/0:128:128,0:128:4592:0:0:0,-38.5318,-413.444	0/0:253:251,1:251:9012:1:36:0,-72.6211,-807.323	0/0:58:58,0:58:2084:0:0:0,-17.4597,-187.83	0/0:87:87,0:87:3116:0:0:0,-26.1896,-280.667	0/1:84:47,37:47:1684:37:1324:-94.1756,0,-126.56	0/0:136:136,0:136:4892:0:0:0,-40.9401,-440.429	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/0:73:72,1:72:2588:1:36:0,-18.3769,-229.57	0/0:58:58,0:58:2088:0:0:0,-17.4597,-188.19	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.453	0/1:80:41,39:41:1472:39:1388:-101.137,0,-108.694	0/1:69:21,48:21:756:48:1709:-133.323,0,-47.5938	0/0:94:94,0:94:3380:0:0:0,-28.2968,-304.414	0/0:111:111,0:111:3988:0:0:0,-33.4143,-359.109
chr06	4514469	.	C	T	377110	PASS	AB=0.504689;ABP=4.41554;AC=144;AF=0.765957;AN=188;AO=13764;CIGAR=1X;DP=17445;DPB=17445;DPRA=0;EPP=29787;EPPR=7935.46;GTI=1;LEN=1;MEANALT=1.08511;MQM=59.9488;MQMR=59.976;NS=94;NUMALT=1;ODDS=0.768051;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=491217;QR=131123;RO=3673;RPL=6723;RPP=18.9641;RPPR=13.468;RPR=7041;RUN=1;SAF=6735;SAP=16.6468;SAR=7029;SRF=1908;SRP=15.0997;SRR=1765;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:138:87,51:87:3089:51:1824:-122.899,0,-236.695	1/1:178:0,178:0:0:178:6358:-572.311,-53.5833,0	0/1:260:131,129:131:4658:129:4614:-337.155,0,-340.34	1/1:482:2,479:2:68:479:17071:-1529.57,-138.664,0	0/1:58:29,29:29:1036:29:1036:-76.0942,0,-76.0942	0/1:94:48,46:48:1663:46:1648:-120.303,0,-121.654	1/1:142:1,141:1:36:141:5038:-449.966,-39.148,0	0/1:375:164,211:164:5859:211:7548:-566.463,0,-414.536	0/1:283:130,153:130:4626:153:5478:-407.955,0,-331.313	0/1:174:79,95:79:2840:95:3400:-253.799,0,-203.458	0/1:120:65,55:65:2336:55:1949:-139.558,0,-174.376	1/1:208:0,207:0:0:207:7423:-667.753,-62.3132,0	0/1:175:75,100:75:2680:100:3587:-270.355,0,-188.765	0/1:166:88,78:88:3138:78:2787:-200.657,0,-232.674	1/1:197:0,197:0:0:197:7029:-632.67,-59.3029,0	0/1:149:77,72:77:2760:72:2567:-186.426,0,-203.788	1/1:77:1,76:1:36:76:2695:-239.194,-19.581,0	1/1:101:0,101:0:0:101:3621:-326.095,-30.404,0	1/1:59:0,59:0:0:59:2098:-189.089,-17.7608,0	1/1:432:2,430:2:72:430:15289:-1368.89,-123.208,0	0/1:661:329,332:329:11748:332:11831:-865.664,0,-858.201	1/1:138:0,138:0:0:138:4937:-444.477,-41.5421,0	0/1:265:128,136:128:4547:136:4833:-355.292,0,-329.565	0/1:106:47,59:47:1680:59:2106:-157.77,0,-119.578	0/1:131:74,57:74:2619:57:2040:-144.437,0,-195.667	1/1:439:4,435:4:144:435:15527:-1383.82,-118.839,0	1/1:366:0,366:0:0:366:13054:-1174.43,-110.177,0	1/1:61:0,61:0:0:61:2196:-197.905,-18.3628,0	0/1:404:216,188:216:7716:188:6681:-479.752,0,-572.857	0/1:201:86,114:86:3081:114:4076:-306.457,0,-216.95	1/1:250:3,247:3:108:247:8791:-781.1,-65.1823,0	0/1:17:10,7:10:360:7:248:-17.5467,0,-27.6268	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	0/1:12:9,3:9:320:3:108:-6.46281,0,-25.53	0/1:13:3,10:3:108:10:356:-28.4679,0,-6.16178	1/1:32:0,31:0:0:31:1088:-98.0122,-9.33193,0	0/1:325:155,170:155:5535:170:6080:-449.465,0,-400.441	1/1:175:0,175:0:0:175:6232:-560.975,-52.6803,0	1/1:104:0,104:0:0:104:3729:-335.808,-31.3071,0	0/1:13:3,10:3:108:10:345:-27.4674,0,-6.16178	1/1:178:0,178:0:0:178:6337:-569.351,-53.5833,0	1/1:61:0,61:0:0:61:2165:-195.115,-18.3628,0	0/1:454:221,232:221:7920:232:8287:-609.112,0,-576.092	0/1:141:66,75:66:2354:75:2678:-198.819,0,-169.672	0/1:124:53,71:53:1887:71:2533:-190.891,0,-132.78	0/1:214:95,118:95:3381:118:4201:-313.938,0,-240.174	0/1:205:105,100:105:3756:100:3548:-257.498,0,-276.521	1/1:376:1,375:1:36:375:13327:-1195.59,-109.589,0	1/1:162:1,161:1:36:161:5751:-513.876,-45.1686,0	0/1:186:88,98:88:3149:98:3493:-258.586,0,-227.642	0/1:185:96,89:96:3431:89:3169:-229.742,0,-253.313	0/1:16:10,6:10:347:6:215:-14.8827,0,-26.7471	1/1:159:2,157:2:72:157:5583:-495.758,-41.027,0	1/1:132:0,132:0:0:132:4727:-425.581,-39.736,0	0/1:13:8,5:8:284:5:180:-12.6387,0,-21.99	0/1:225:96,129:96:3412:129:4598:-346.251,0,-239.562	1/1:94:0,94:0:0:94:3348:-301.536,-28.2968,0	0/1:24:14,10:14:495:10:351:-24.702,0,-37.6583	0/1:18:11,7:11:392:7:248:-17.2457,0,-30.2015	0/1:182:96,86:96:3436:86:3022:-217.421,0,-254.666	1/1:192:0,192:0:0:192:6874:-618.725,-57.7978,0	0/1:36:16,20:16:568:20:701:-52.5747,0,-40.6148	1/1:251:0,251:0:0:251:8967:-807.002,-75.5585,0	1/1:294:2,292:2:72:292:10448:-933.344,-81.6661,0	1/1:168:1,167:1:36:167:5955:-532.456,-46.9748,0	1/1:185:0,185:0:0:185:6577:-592.014,-55.6906,0	1/1:502:3,499:3:108:499:17820:-1593.33,-141.042,0	1/1:287:2,285:2:72:285:10184:-909.651,-79.5589,0	1/1:98:0,98:0:0:98:3498:-315.026,-29.5009,0	1/1:115:0,114:0:0:114:4081:-367.108,-34.3174,0	1/1:90:0,90:0:0:90:3214:-289.482,-27.0927,0	0/1:59:40,19:40:1440:19:684:-44.1296,0,-112.137	1/1:144:0,144:0:0:144:5135:-462.288,-43.3483,0	0/1:162:74,88:74:2639:88:3122:-232.427,0,-188.99	0/1:395:213,182:213:7648:182:6498:-465.996,0,-569.446	1/1:301:1,300:1:36:300:10747:-963.519,-87.0118,0	1/1:224:0,224:0:0:224:8004:-720.38,-67.4307,0	1/1:220:3,217:3:108:217:7784:-690.323,-56.1514,0	0/1:62:32,30:32:1148:30:1072:-78.1286,0,-84.966	1/1:205:1,204:1:32:204:7278:-651.872,-58.5118,0	1/1:278:1,277:1:36:277:9905:-887.777,-80.0881,0	1/1:478:2,476:2:72:476:16964:-1519.33,-137.056,0	1/1:108:0,108:0:0:108:3852:-346.872,-32.5112,0	1/1:205:0,205:0:0:205:7319:-658.759,-61.7112,0	0/1:147:61,86:61:2159:86:3055:-230.929,0,-150.323	1/1:281:0,281:0:0:281:10023:-902.007,-84.5894,0	0/1:48:23,25:23:828:25:900:-66.8716,0,-60.3947	1/1:137:0,137:0:0:137:4924:-443.308,-41.2411,0	1/1:137:0,137:0:0:137:4914:-442.41,-41.2411,0	1/1:132:0,132:0:0:132:4716:-424.601,-39.736,0	0/1:180:90,90:90:3215:90:3217:-235.566,0,-235.387	0/1:141:99,42:99:3547:42:1508:-93.567,0,-276.992	1/1:185:0,185:0:0:185:6615:-595.43,-55.6906,0	1/1:248:0,248:0:0:248:8871:-798.369,-74.6554,0
chr06	4514496	.	C	T	398117	PASS	AB=0.508465;ABP=7.53228;AC=144;AF=0.765957;AN=188;AO=13624;CIGAR=1X;DP=17240;DPB=17240;DPRA=0;EPP=5588.91;EPPR=3033.83;GTI=1;LEN=1;MEANALT=1.05319;MQM=59.9513;MQMR=59.9898;NS=94;NUMALT=1;ODDS=0.436421;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=485247;QR=127418;RO=3611;RPL=10417;RPP=8288.54;RPPR=1276.08;RPR=3207;RUN=1;SAF=6565;SAP=41.9062;SAR=7059;SRF=1850;SRP=7.77359;SRR=1761;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:133:81,52:81:2866:52:1856:-127.283,0,-218.141	1/1:179:3,176:3:108:176:6276:-554.86,-43.8092,0	0/1:257:126,131:126:4438:131:4666:-342.738,0,-322.228	1/1:478:1,477:1:36:477:17028:-1528.48,-140.294,0	0/1:56:29,27:29:1032:27:972:-70.9402,0,-76.3358	0/1:88:46,42:46:1631:42:1499:-108.713,0,-120.587	1/1:140:1,139:1:36:139:4947:-441.782,-38.5459,0	0/1:370:160,210:160:5635:210:7480:-561.852,0,-395.895	0/1:284:127,157:127:4466:157:5588:-417.551,0,-316.622	0/1:172:78,94:78:2776:94:3352:-250.035,0,-198.305	0/1:118:63,55:63:2247:55:1957:-140.879,0,-166.971	1/1:216:0,216:0:0:216:7679:-691.146,-65.0225,0	0/1:176:74,102:74:2613:102:3632:-274.102,0,-182.434	0/1:163:87,76:87:3053:76:2694:-193.494,0,-225.929	1/1:197:0,197:0:0:197:7057:-635.188,-59.3029,0	0/1:142:74,68:74:2605:68:2420:-175.309,0,-191.95	1/1:75:0,75:0:0:75:2655:-239.194,-22.5773,0	1/1:101:0,101:0:0:101:3602:-324.386,-30.404,0	1/1:56:0,56:0:0:56:2008:-180.993,-16.8577,0	1/1:436:1,435:1:36:435:15513:-1392.28,-127.651,0	0/1:648:319,328:319:11185:328:11606:-849.286,0,-811.43	1/1:142:0,142:0:0:142:5024:-452.305,-42.7463,0	0/1:262:124,138:124:4392:138:4936:-365.52,0,-316.586	0/1:105:47,58:47:1653:58:2044:-152.565,0,-117.448	0/1:129:72,57:72:2514:57:2040:-145.029,0,-186.489	1/1:438:4,433:4:144:433:15435:-1375.55,-118.596,0	1/1:358:0,358:0:0:358:12745:-1146.71,-107.769,0	1/1:59:0,58:0:0:58:2084:-187.47,-17.4597,0	0/1:406:215,190:215:7642:190:6773:-487.366,0,-565.543	0/1:205:89,116:89:3155:116:4143:-311.338,0,-222.466	1/1:252:3,249:3:104:249:8827:-784.716,-66.1568,0	0/1:17:10,7:10:343:7:250:-17.7292,0,-26.0831	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/1:12:9,3:9:309:3:108:-6.46281,0,-24.5284	0/1:11:3,8:3:108:8:280:-22.228,0,-6.76384	1/1:29:0,29:0:0:29:1025:-92.5431,-8.72987,0	0/1:328:158,169:158:5549:169:6051:-445.895,0,-400.744	1/1:173:3,170:3:108:170:6029:-532.644,-42.003,0	1/1:102:2,100:2:64:100:3584:-316.688,-24.6264,0	0/1:12:3,9:3:108:9:324:-25.8935,0,-6.46281	1/1:168:0,168:0:0:168:5990:-539.011,-50.573,0	1/1:61:1,60:1:36:60:2138:-189.088,-14.7646,0	0/1:450:217,233:217:7695:233:8289:-610.557,0,-557.128	0/1:143:66,77:66:2347:77:2745:-204.245,0,-168.442	0/1:126:53,73:53:1880:73:2565:-193.165,0,-131.546	0/1:210:93,117:93:3297:117:4162:-311.548,0,-233.733	0/1:193:99,94:99:3487:94:3342:-242.887,0,-255.944	1/1:367:1,366:1:36:366:13057:-1171.33,-106.88,0	1/1:165:1,164:1:36:164:5852:-523.189,-46.0717,0	0/1:180:85,95:85:2985:95:3388:-250.949,0,-214.696	0/1:182:94,88:94:3338:88:3140:-228.038,0,-245.851	0/1:15:9,6:9:315:6:212:-14.9093,0,-24.1718	1/1:155:2,153:2:72:153:5492:-487.568,-39.8229,0	1/1:131:1,130:1:36:130:4638:-413.985,-35.8367,0	0/1:12:8,4:8:273:4:140:-9.33222,0,-21.2878	0/1:217:93,124:93:3310:124:4431:-333.637,0,-232.795	1/1:93:2,91:2:72:91:3248:-285.705,-21.1591,0	0/1:24:13,11:13:468:11:396:-28.758,0,-35.2349	0/1:18:11,7:11:388:7:248:-17.2457,0,-29.8388	0/1:180:95,85:95:3375:85:3025:-218.288,0,-249.782	1/1:185:0,185:0:0:185:6598:-593.897,-55.6906,0	0/1:37:17,20:17:600:20:720:-53.9883,0,-43.1911	1/1:256:0,256:0:0:256:9039:-813.437,-77.0637,0	1/1:298:2,296:2:72:296:10544:-942.018,-82.8702,0	1/1:165:1,164:1:36:164:5839:-522.016,-46.0717,0	1/1:182:0,182:0:0:182:6471:-582.477,-54.7875,0	1/1:505:2,503:2:72:503:17911:-1604.65,-145.183,0	1/1:287:2,285:2:72:285:10149:-906.506,-79.5589,0	1/1:98:1,97:1:36:97:3434:-305.675,-25.9027,0	1/1:113:0,113:0:0:113:4017:-361.72,-34.0164,0	1/1:88:0,88:0:0:88:3133:-282.197,-26.4906,0	0/1:56:39,17:39:1359:17:608:-38.1943,0,-105.747	1/1:141:0,141:0:0:141:5022:-452.125,-42.4452,0	0/1:161:72,89:72:2498:89:3152:-235.438,0,-176.604	0/1:402:213,189:213:7493:189:6731:-484.854,0,-553.407	1/1:296:0,296:0:0:296:10548:-949.235,-89.1049,0	1/1:222:1,221:1:36:221:7887:-706.259,-63.2304,0	1/1:220:3,217:3:108:217:7735:-686.09,-56.1514,0	0/1:59:30,29:30:1072:29:1031:-75.3419,0,-79.0317	1/1:207:0,207:0:0:207:7364:-662.812,-62.3132,0	1/1:271:2,269:2:72:269:9604:-857.476,-74.7424,0	1/1:468:1,467:1:36:467:16578:-1487.99,-137.284,0	1/1:109:1,108:1:27:108:3855:-344.437,-30.1125,0	1/1:201:0,201:0:0:201:7183:-646.526,-60.507,0	0/1:147:60,87:60:2122:87:3075:-232.727,0,-146.996	1/1:278:0,278:0:0:278:9952:-895.615,-83.6863,0	0/1:48:24,24:24:836:24:856:-62.9117,0,-61.1053	1/1:136:1,135:1:32:135:4767:-425.99,-37.7408,0	1/1:134:0,134:0:0:134:4780:-430.358,-40.338,0	1/1:125:0,125:0:0:125:4462:-401.75,-37.6288,0	0/1:173:88,85:88:3068:85:3036:-221.392,0,-224.272	0/1:138:95,43:95:3369:43:1532:-96.6286,0,-261.885	1/1:156:0,156:0:0:156:5555:-500.074,-46.9607,0	1/1:243:0,243:0:0:243:8672:-780.474,-73.1503,0
chr06	4695422	.	TAGT	CGGC,CGGT	225729	PASS	AB=0.467548,0.528606;ABP=41.0633,32.5778;AC=143,45;AF=0.760638,0.239362;AN=188;AO=8261,2228;CIGAR=2X1M1X,2X2M;DP=10532;DPB=10533;DPRA=11.314,1.02668;EPP=17941.5,4841.05;EPPR=0;GTI=2;LEN=4,2;MEANALT=2.03226,2.42857;MQM=59.8251,59.9794;MQMR=0;NS=94;NUMALT=2;ODDS=4.15702;PAIRED=0,0;PAIREDR=0;PAO=4,0;PQA=144,0;PQR=0;PRO=0;QA=292074,79147;QR=0;RO=0;RPL=0,0;RPP=17941.5,4841.05;RPPR=0;RPR=8261,2228;RUN=1,1;SAF=8261,2228;SAP=17941.5,4841.05;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:70:0,19,51:0:0:19,51:647,1805:-199.858,-147.376,-141.657,-52.8258,0,-37.4733	1/1:83:0,83,0:0:0:83,0:2944,0:-265.079,-24.9855,0,-265.079,-24.9855,-265.079	1/2:190:0,87,102:0:0:87,102:3079,3577:-541.898,-291.108,-264.919,-250.821,0,-220.116	1/1:278:0,278,0:0:0:278,0:9830,0:-884.512,-83.6863,0,-884.512,-83.6863,-884.512	2/2:10:0,0,10:0:0:0,10:0,349:-31.7447,-31.7447,-31.7447,-3.0103,-3.0103,0	1/2:7:0,5,1:0:0:5,1:180,34:-17.4422,-2.74802,-1.24287,-14.6871,0,-14.3861	1/1:67:0,67,0:0:0:67,0:2354,0:-212.118,-20.169,0,-212.118,-20.169,-212.118	1/2:173:0,80,93:0:0:80,93:2811,3270:-495.306,-266.515,-242.433,-229.143,0,-201.147	1/2:95:0,43,51:0:0:43,51:1497,1815:-269.629,-147.919,-134.974,-121.703,0,-106.35	1/2:118:0,50,68:0:0:50,68:1769,2427:-342.296,-198.215,-183.164,-144.436,0,-123.966	1/2:32:0,17,15:0:0:17,15:591,540:-92.4584,-44.4211,-39.3036,-48.3914,0,-43.8759	1/1:87:0,86,0:0:0:86,0:3040,0:-273.469,-25.8886,0,-273.469,-25.8886,-273.469	1/2:65:0,35,30:0:0:35,30:1237,1074:-188.677,-87.9421,-77.406,-101.091,0,-92.0597	1/2:33:0,20,13:0:0:20,13:717,455:-95.8527,-37.3683,-31.3477,-58.8376,0,-54.9242	1/1:56:0,56,0:0:0:56,0:1993,0:-179.625,-16.8577,0,-179.625,-16.8577,-179.625	1/2:48:0,21,27:0:0:21,27:739,970:-139.155,-79.4899,-73.1683,-60.0183,0,-51.8905	1/1:23:0,23,0:0:0:23,0:791,0:-71.502,-6.92369,0,-71.502,-6.92369,-71.502	1/1:45:0,45,0:0:0:45,0:1593,0:-143.655,-13.5464,0,-143.655,-13.5464,-143.655	1/1:27:0,26,1:0:0:26,1:907,36:-81.5825,-7.82678,0,-78.6447,-4.52954,-78.3436	1/1:518:0,517,0:0:0:517,0:18374,0:-1651.62,-155.633,0,-1651.62,-155.633,-1651.62	1/2:307:0,153,151:0:0:153,151:5421,5313:-874.14,-432.547,-386.49,-441.644,0,-396.188	1/1:111:0,108,1:0:0:108,1:3824,36:-343.988,-32.5112,0,-341.051,-29.5688,-340.75	1/2:167:0,82,84:0:0:82,84:2903,2965:-477.9,-241.456,-216.771,-236.458,0,-211.171	1/2:107:0,47,60:0:0:47,60:1645,2154:-309.899,-176.066,-161.917,-134.187,0,-116.125	1/2:68:0,28,40:0:0:28,40:1002,1415:-197.314,-115.605,-107.176,-82.065,0,-70.0238	1/1:361:0,359,1:0:0:359,1:12665,36:-1139.34,-108.07,0,-1136.4,-105.121,-1136.1	1/1:293:0,290,1:0:0:290,1:10225,36:-919.649,-87.2987,0,-916.712,-84.3613,-916.411	1/1:30:0,30,0:0:0:30,0:1057,0:-95.4396,-9.0309,0,-95.4396,-9.0309,-95.4396	1/2:456:0,210,245:0:0:210,245:7461,8714:-1318.11,-710.141,-646.925,-607.964,0,-534.212	1/2:129:0,64,63:0:0:64,63:2269,2247:-368.123,-183.27,-164.004,-184.949,0,-165.984	1/1:130:0,129,1:0:0:129,1:4555,36:-409.44,-38.8329,0,-406.502,-35.5356,-406.201	1/2:21:0,8,13:0:0:8,13:281,468:-61.4137,-38.5463,-36.138,-23.2219,0,-19.3085	1/1:32:0,32,0:0:0:32,0:1137,0:-102.638,-9.63296,0,-102.638,-9.63296,-102.638	1/2:13:0,3,10:0:0:3,10:108,350:-37.6405,-28.8259,-27.9228,-9.17208,0,-6.16178	1/2:13:0,7,6:0:0:7,6:245,203:-36.7339,-16.7942,-14.687,-20.2833,0,-18.4771	1/1:15:0,15,0:0:0:15,0:531,0:-48.122,-4.51545,0,-48.122,-4.51545,-48.122	1/2:184:0,91,93:0:0:91,93:3236,3331:-535.719,-272.011,-244.617,-264.065,0,-236.069	1/1:184:0,183,0:0:0:183,0:6460,0:-581.114,-55.0885,0,-581.114,-55.0885,-581.114	1/1:58:0,58,0:0:0:58,0:2065,0:-186.119,-17.4597,0,-186.119,-17.4597,-186.119	1/2:5:0,2,3:0:0:2,3:72,108:-15.0469,-9.17208,-8.57002,-6.23466,0,-5.33157	1/1:142:0,141,0:0:0:141,0:5014,0:-451.048,-42.4452,0,-451.048,-42.4452,-451.048	1/1:41:0,41,0:0:0:41,0:1469,0:-132.506,-12.3422,0,-132.506,-12.3422,-132.506	1/2:190:0,69,121:0:0:69,121:2449,4315:-551.639,-352.101,-331.33,-199.894,0,-163.469	1/2:74:0,36,38:0:0:36,38:1268,1348:-213.41,-110.18,-99.343,-103.584,0,-92.1445	1/2:54:0,28,26:0:0:28,26:982,912:-154.476,-74.5664,-66.1375,-80.2599,0,-72.4331	1/2:100:0,48,52:0:0:48,52:1692,1851:-288.976,-151.216,-136.766,-138.114,0,-122.461	1/2:143:0,69,74:0:0:69,74:2428,2621:-411.505,-213.857,-193.086,-198.001,0,-175.725	1/1:151:0,150,0:0:0:150,0:5279,0:-474.894,-45.1545,0,-474.894,-45.1545,-474.894	1/1:106:0,106,0:0:0:106,0:3699,0:-332.689,-31.9092,0,-332.689,-31.9092,-332.689	1/2:160:0,82,77:0:0:82,77:2910,2736:-460.04,-222.942,-198.258,-237.093,0,-213.914	1/2:127:0,54,73:0:0:54,73:1911,2614:-369.189,-213.533,-197.278,-156.011,0,-134.036	1/2:9:0,3,6:0:0:3,6:108,216:-26.7966,-17.9843,-17.0812,-9.17208,0,-7.3659	1/1:210:0,207,2:0:0:207,2:7322,70:-658.634,-62.3132,0,-652.938,-56.6244,-652.336	1/1:81:0,81,0:0:0:81,0:2831,0:-255.005,-24.3834,0,-255.005,-24.3834,-255.005	1/2:17:0,9,8:0:0:9,8:323,286:-50.0251,-23.6772,-20.968,-26.7058,0,-24.2976	1/2:193:0,90,102:0:0:90,102:3179,3627:-554.46,-295.571,-268.478,-258.883,0,-228.178	1/1:62:0,62,0:0:0:62,0:2190,0:-197.366,-18.6639,0,-197.366,-18.6639,-197.366	1/2:24:0,17,6:0:0:17,6:608,203:-65.9193,-16.4374,-11.3199,-49.4681,0,-47.6619	1/2:8:0,5,3:0:0:5,3:176,108:-23.4951,-9.17208,-7.66693,-14.6799,0,-13.7768	1/2:129:0,69,60:0:0:69,60:2419,2122:-370.019,-173.184,-152.413,-197.187,0,-179.125	1/1:76:0,76,0:0:0:76,0:2705,0:-243.694,-22.8783,0,-243.694,-22.8783,-243.694	1/2:8:0,2,6:0:0:2,6:72,216:-23.8592,-17.9843,-17.3823,-6.23466,0,-4.42848	1/1:273:0,271,1:0:0:271,1:9639,36:-867.099,-81.5791,0,-864.161,-78.6417,-863.86	1/1:175:0,172,0:0:0:172,0:6056,0:-544.702,-51.7772,0,-544.702,-51.7772,-544.702	1/1:72:0,71,0:0:0:71,0:2505,0:-225.342,-21.3731,0,-225.342,-21.3731,-225.342	1/1:139:0,138,1:0:0:138,1:4855,36:-436.749,-41.5421,0,-433.811,-38.2449,-433.51	1/1:318:0,318,0:0:0:318,0:11197,0:-1007.26,-95.7275,0,-1007.26,-95.7275,-1007.26	1/1:222:0,219,3:0:0:219,3:7762,108:-698.212,-65.9256,0,-689.4,-56.7535,-688.496	1/1:30:0,29,0:0:0:29,0:1019,0:-91.7003,-8.72987,0,-91.7003,-8.72987,-91.7003	1/1:95:0,95,0:0:0:95,0:3364,0:-302.972,-28.5979,0,-302.972,-28.5979,-302.972	1/1:36:0,36,0:0:0:36,0:1278,0:-115.322,-10.8371,0,-115.322,-10.8371,-115.322	1/2:37:0,18,18:0:0:18,18:634,629:-102.744,-51.2322,-45.8136,-51.5769,0,-46.1584	1/1:165:0,163,0:0:0:163,0:5751,0:-517.148,-49.0679,0,-517.148,-49.0679,-517.148	1/2:149:0,67,82:0:0:67,82:2372,2938:-433.1,-239.97,-219.801,-193.485,0,-168.801	1/2:154:0,83,70:0:0:83,70:2930,2489:-441.497,-202.928,-177.943,-238.661,0,-217.588	1/1:241:0,239,0:0:0:239,0:8445,0:-759.726,-71.9462,0,-759.726,-71.9462,-759.726	1/1:38:0,36,2:0:0:36,2:1256,72:-112.979,-10.8371,0,-107.104,-4.60242,-106.502	1/1:131:0,130,0:0:0:130,0:4641,0:-417.551,-39.1339,0,-417.551,-39.1339,-417.551	1/2:23:0,12,11:0:0:12,11:430,394:-67.527,-32.4902,-28.8778,-35.3948,0,-32.0834	1/1:148:0,148,0:0:0:148,0:5228,0:-470.606,-44.5524,0,-470.606,-44.5524,-470.606	1/1:125:0,122,2:0:0:122,2:4291,72:-386.007,-36.7257,0,-380.132,-30.8508,-379.53	1/1:242:0,237,3:0:0:237,3:8381,108:-753.984,-71.3441,0,-745.171,-62.4749,-744.268	1/1:44:0,44,0:0:0:44,0:1566,0:-141.228,-13.2453,0,-141.228,-13.2453,-141.228	1/1:57:0,57,0:0:0:57,0:2018,0:-181.891,-17.1587,0,-181.891,-17.1587,-181.891	1/2:50:0,23,27:0:0:23,27:817,970:-146.061,-79.4899,-72.5662,-66.9281,0,-58.8003	1/1:124:0,122,0:0:0:122,0:4303,0:-387.117,-36.7257,0,-387.117,-36.7257,-387.117	1/2:30:0,13,17:0:0:13,17:468,612:-88.4823,-50.2959,-46.3825,-38.5463,0,-33.4287	1/1:50:0,50,0:0:0:50,0:1776,0:-160.116,-15.0515,0,-160.116,-15.0515,-160.116	1/1:51:0,51,0:0:0:51,0:1828,0:-164.8,-15.3525,0,-164.8,-15.3525,-164.8	1/1:36:0,36,0:0:0:36,0:1269,0:-114.502,-10.8371,0,-114.502,-10.8371,-114.502	1/2:88:0,44,43:0:0:44,43:1571,1537:-253.399,-125.319,-112.074,-128.077,0,-115.133	1/2:92:0,32,60:0:0:32,60:1136,2137:-267.097,-174.536,-164.903,-92.9164,0,-74.8546	1/1:185:0,185,0:0:0:185,0:6521,0:-586.98,-55.6906,0,-586.98,-55.6906,-586.98	1/1:98:0,98,0:0:0:98,0:3478,0:-313.233,-29.5009,0,-313.233,-29.5009,-313.233
chr06	5171226	.	A	G	26921.1	PASS	AB=0.557189;ABP=82.2398;AC=44;AF=0.234043;AN=188;AO=1559;CIGAR=1X;DP=6235;DPB=6235;DPRA=0.928376;EPP=3388.34;EPPR=10152.5;GTI=0;LEN=1;MEANALT=1.02083;MQM=59.4529;MQMR=59.3246;NS=94;NUMALT=1;ODDS=9.95389;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55656;QR=167461;RO=4674;RPL=0;RPP=3388.34;RPPR=10152.5;RPR=1559;RUN=1;SAF=1559;SAP=3388.34;SAR=0;SRF=4674;SRP=10152.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:25,36:25:900:36:1288:-97.8536,0,-62.9418	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.974	0/1:113:50,63:50:1785:63:2237:-167.533,0,-126.882	0/0:93:93,0:93:3317:0:0:0,-27.9958,-298.566	0/1:50:20,30:20:720:30:1061:-80.6781,0,-50.068	0/1:50:22,28:22:788:28:1008:-75.8846,0,-56.1933	0/0:74:74,0:74:2664:0:0:0,-22.2762,-239.973	0/1:118:65,53:65:2332:53:1885:-134.315,0,-174.174	0/1:95:44,51:44:1561:51:1817:-134.868,0,-112.152	0/1:59:28,31:28:1004:31:1112:-82.6199,0,-72.7321	0/1:42:18,24:18:639:24:864:-65.4384,0,-45.0306	0/0:96:96,0:96:3444:0:0:0,-28.8989,-310.124	0/1:49:24,25:24:864:25:885:-65.2151,0,-63.3239	0/1:60:29,31:29:1044:31:1101:-81.3157,0,-76.0785	0/0:61:61,0:61:2196:0:0:0,-18.3628,-197.723	0/1:53:32,21:32:1148:21:756:-52.2744,0,-87.666	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.674	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:142:142,0:142:5093:0:0:0,-42.7463,-458.328	0/1:80:42,38:42:1512:38:1364:-98.7507,0,-112.246	0/0:106:106,0:106:3792:0:0:0,-31.9092,-341.101	0/1:81:34,47:34:1186:47:1688:-127.792,0,-82.644	0/1:71:42,29:42:1497:29:1040:-72.485,0,-113.645	0/1:77:41,36:41:1457:36:1285:-92.753,0,-108.159	0/0:129:129,0:129:4629:0:0:0,-38.8329,-416.457	0/0:148:148,0:148:5290:0:0:0,-44.5524,-476.135	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.787	0/1:119:47,72:47:1692:72:2588:-197.306,0,-116.127	0/1:79:28,51:28:1008:51:1817:-140.028,0,-67.187	0/0:47:45,2:45:1601:2:72:0,-7.31169,-137.32	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6957	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/1:21:4,17:4:144:17:608:-48.7127,0,-6.99199	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.73	0/1:181:87,94:87:3120:94:3346:-246.772,0,-225.812	0/0:110:110,0:110:3952:0:0:0,-33.1133,-355.779	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.268	0/1:14:3,11:3:108:11:387:-30.9515,0,-5.85599	0/0:56:56,0:56:1986:0:0:0,-16.8577,-178.997	0/0:42:42,0:42:1508:0:0:0,-12.6433,-135.506	0/1:150:64,86:64:2289:86:3096:-233.69,0,-161.087	0/1:42:18,24:18:648:24:849:-64.0842,0,-45.5681	0/1:52:26,26:26:932:26:924:-67.7691,0,-68.5453	0/1:99:40,59:40:1440:59:2101:-159.556,0,-100.079	0/1:111:56,55:56:2012:55:1972:-144.292,0,-147.897	0/0:130:130,0:130:4634:0:0:0,-39.1339,-415.997	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.441	0/1:44:15,29:15:536:29:1025:-79.3154,0,-35.3109	0/1:113:45,68:45:1601:68:2436:-185.43,0,-110.354	0/1:4:1,3:1:32:3:108:-8.87105,0,-1.99519	0/0:106:106,0:106:3812:0:0:0,-31.9092,-343	0/0:37:37,0:37:1332:0:0:0,-11.1381,-119.98	0/1:18:11,7:11:396:7:237:-16.2396,0,-30.5441	0/1:97:30,67:30:1080:67:2404:-187.392,0,-68.2653	0/0:68:67,0:67:2408:0:0:0,-20.169,-215.715	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/1:15:7,8:7:252:8:284:-21.3879,0,-18.5135	0/1:73:25,48:25:896:48:1720:-133.032,0,-58.9356	0/0:107:107,0:107:3848:0:0:0,-32.2102,-346.415	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.404	0/0:92:91,1:91:3276:1:36:0,-24.0965,-291.362	0/0:40:40,0:40:1417:0:0:0,-12.0412,-127.329	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6697	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.943	0/0:112:111,1:111:3973:1:36:0,-30.1171,-354.041	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.706	0/0:41:41,0:41:1457:0:0:0,-12.3422,-131.408	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.199	0/1:21:8,13:8:288:13:464:-35.7759,0,-19.9458	0/0:106:106,0:106:3789:0:0:0,-31.9092,-340.547	0/1:61:32,29:32:1148:29:1010:-72.8442,0,-85.2369	0/1:98:37,60:37:1324:60:2152:-164.527,0,-89.9942	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.712	0/0:58:58,0:58:2061:0:0:0,-17.4597,-185.729	0/0:87:87,0:87:3109:0:0:0,-26.1896,-279.991	0/1:24:10,14:10:360:14:498:-37.5921,0,-25.3279	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.572	0/0:42:42,0:42:1482:0:0:0,-12.6433,-133.443	0/0:147:147,0:147:5265:0:0:0,-44.2514,-473.941	0/0:47:47,0:47:1676:0:0:0,-14.1484,-150.961	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.254	0/1:31:15,16:15:540:16:576:-42.8431,0,-38.9616	0/0:112:112,0:112:4032:0:0:0,-33.7154,-362.495	0/1:20:15,5:15:540:5:180:-10.5315,0,-42.9159	0/0:77:77,0:77:2749:0:0:0,-23.1793,-247.598	0/0:65:65,0:65:2321:0:0:0,-19.5669,-209.104	0/0:28:27,1:27:957:1:36:0,-4.97435,-82.9812	0/1:121:47,74:47:1692:74:2633:-200.782,0,-115.502	0/1:84:30,54:30:1080:54:1914:-147.225,0,-72.2267	0/0:52:52,0:52:1860:0:0:0,-15.6536,-166.955	0/0:89:89,0:89:3196:0:0:0,-26.7917,-287.85
chr06	5171245	.	AAA	GAC,GAA	149700	PASS	AB=0.442245,0.553077;ABP=83.5251,71.0104;AC=144,44;AF=0.765957,0.234043;AN=188;AO=4652,1540;CIGAR=1X1M1X,1X2M;DP=6233;DPB=6233;DPRA=0,0.945381;EPP=5501.07,1222.56;EPPR=7.35324;GTI=0;LEN=3,1;MEANALT=1.8617,2.2766;MQM=59.3699,59.5227;MQMR=60;NS=94;NUMALT=2;ODDS=9.71661;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=158760,55001;QR=72;RO=2;RPL=4042,1235;RPP=5501.07,1222.56;RPPR=7.35324;RPR=610,305;RUN=1,1;SAF=4652,1540;SAP=10104.7,3347.08;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:60:0,25,35:0:0:25,35:861,1247:-171.915,-101.989,-94.4629,-70.2753,0,-59.7392	1/1:32:0,31,0:0:0:31,0:1038,0:-93.4974,-9.33193,0,-93.4974,-9.33193,-93.4974	1/2:112:0,49,62:0:0:49,62:1685,2200:-316.171,-179.344,-164.594,-136.961,0,-118.298	1/1:93:0,90,0:0:0:90,0:3014,0:-271.235,-27.0927,0,-271.235,-27.0927,-271.235	1/2:49:0,20,29:0:0:20,29:683,1040:-140.528,-85.1147,-79.0941,-55.7619,0,-47.032	1/2:48:0,22,26:0:0:22,26:771,927:-138.634,-75.8983,-69.2756,-63.0884,0,-55.2617	1/1:74:0,74,0:0:0:74,0:2553,0:-229.995,-22.2762,0,-229.995,-22.2762,-229.995	1/2:116:0,64,52:0:0:64,52:2119,1868:-323.936,-152.645,-133.379,-171.637,0,-155.984	1/2:95:0,43,51:0:0:43,51:1482,1820:-268.776,-148.417,-135.473,-120.427,0,-105.075	1/2:59:0,27,31:0:0:27,31:892,1098:-161.679,-89.5794,-81.4516,-72.2239,0,-62.8919	1/2:44:0,17,26:0:0:17,26:585,923:-122.717,-75.2162,-70.0987,-47.5063,0,-39.6796	1/1:96:0,94,0:0:0:94,0:3177,0:-285.783,-28.2968,0,-285.783,-28.2968,-285.783	1/2:49:0,24,25:0:0:24,25:807,887:-137.99,-72.6215,-65.3967,-65.7135,0,-58.1877	1/2:60:0,29,31:0:0:29,31:986,1090:-169.016,-89.0666,-80.3367,-80.2945,0,-70.9625	1/1:61:0,61,0:0:0:61,0:2111,0:-190.219,-18.3628,0,-190.219,-18.3628,-190.219	1/2:53:0,32,21:0:0:32,21:1114,747:-151.666,-61.0944,-51.4614,-90.9232,0,-84.6016	1/1:35:0,35,0:0:0:35,0:1210,0:-109.196,-10.5361,0,-109.196,-10.5361,-109.196	1/1:21:0,21,0:0:0:21,0:724,0:-65.479,-6.32163,0,-65.479,-6.32163,-65.479	1/1:30:0,30,0:0:0:30,0:1020,0:-92.1041,-9.0309,0,-92.1041,-9.0309,-92.1041	1/1:142:0,142,0:0:0:142,0:4803,0:-432.269,-42.7463,0,-432.269,-42.7463,-432.269	1/2:80:0,42,38:0:0:42,38:1407,1360:-224.934,-111.034,-98.3906,-114.247,0,-102.808	1/1:106:0,105,0:0:0:105,0:3605,0:-324.379,-31.6082,0,-324.379,-31.6082,-324.379	1/2:81:0,33,47:0:0:33,47:1114,1688:-228.021,-137.745,-127.811,-90.34,0,-76.1916	1/2:71:0,42,29:0:0:42,29:1390,1040:-197.518,-85.1234,-72.4801,-112.741,0,-104.011	1/2:77:0,41,36:0:0:41,36:1363,1296:-216.329,-106.087,-93.7449,-110.589,0,-99.7517	1/1:129:0,129,0:0:0:129,0:4479,0:-403.021,-38.8329,0,-403.021,-38.8329,-403.021	1/1:149:0,149,0:0:0:149,0:5138,0:-462.494,-44.8535,0,-462.494,-44.8535,-462.494	1/1:47:0,47,0:0:0:47,0:1618,0:-145.895,-14.1484,0,-145.895,-14.1484,-145.895	1/2:120:0,47,73:0:0:47,73:1653,2590:-345.281,-211.336,-197.188,-134.297,0,-112.322	1/2:78:0,28,50:0:0:28,50:977,1783:-225.14,-145.701,-137.272,-79.7909,0,-64.7394	1/1:45:0,44,1:0:0:44,1:1475,36:-132.591,-13.2453,0,-129.653,-9.94808,-129.352	1/2:10:0,7,3:0:0:7,3:247,99:-28.4627,-8.33349,-6.22628,-20.466,0,-19.5629	1/1:15:0,15,0:0:0:15,0:479,0:-43.4153,-4.51545,0,-43.4153,-4.51545,-43.4153	1/2:8:0,2,6:0:0:2,6:72,216:-23.8592,-17.9843,-17.3823,-6.23466,0,-4.42848	1/2:21:0,4,17:0:0:4,17:139,604:-60.8547,-49.5554,-48.3513,-11.6481,0,-6.53058	1/1:31:0,30,0:0:0:30,0:1020,0:-91.8206,-9.0309,0,-91.8206,-9.0309,-91.8206	1/2:180:0,86,93:0:0:86,93:2981,3332:-513.784,-271.645,-245.757,-242.26,0,-214.264	1/1:110:0,110,0:0:0:110,0:3748,0:-337.372,-33.1133,0,-337.372,-33.1133,-337.372	1/1:45:0,45,0:0:0:45,0:1572,0:-141.738,-13.5464,0,-141.738,-13.5464,-141.738	1/2:14:0,3,11:0:0:3,11:107,388:-40.6658,-31.946,-31.0429,-9.07529,0,-5.76396	1/1:57:0,57,0:0:0:57,0:1921,0:-173.142,-17.1587,0,-173.142,-17.1587,-173.142	1/1:42:0,42,0:0:0:42,0:1446,0:-130.29,-12.6433,0,-130.29,-12.6433,-130.29	1/2:149:0,62,85:0:0:62,85:2085,3043:-417.066,-248.169,-229.505,-168.922,0,-143.334	1/2:42:0,19,23:0:0:19,23:615,824:-117.048,-67.5596,-61.8401,-49.8269,0,-42.9032	1/2:51:0,26,24:0:0:26,24:875,860:-141.056,-70.1727,-62.346,-70.9476,0,-63.7229	1/2:101:0,41,60:0:0:41,60:1395,2152:-289.012,-175.877,-163.535,-113.482,0,-95.4205	1/2:112:1,57,54:1:36:57,54:1943,1928:-311.467,-154.165,-139.944,-154.655,0,-141.337	1/1:130:0,130,0:0:0:130,0:4409,0:-396.795,-39.1339,0,-396.795,-39.1339,-396.795	1/1:75:0,74,0:0:0:74,0:2509,0:-225.832,-22.2762,0,-225.832,-22.2762,-225.832	1/2:45:0,16,29:0:0:16,29:533,1035:-127.853,-84.7332,-79.9167,-43.4608,0,-34.731	1/2:112:0,45,67:0:0:45,67:1564,2404:-323.541,-196.398,-182.852,-127.494,0,-107.325	1/2:4:0,1,3:0:0:1,3:28,108:-11.3708,-9.17208,-8.87105,-2.4987,0,-1.59561	1/1:107:0,105,0:0:0:105,0:3579,0:-321.599,-31.6082,0,-321.599,-31.6082,-321.599	1/1:37:0,36,0:0:0:36,0:1207,0:-108.527,-10.8371,0,-108.527,-10.8371,-108.527	1/2:18:1,11,6:1:36:11,6:371,216:-44.4168,-14.6862,-14.3123,-27.0862,0,-28.2194	1/2:97:0,29,68:0:0:29,68:1029,2419:-281.261,-197.47,-188.74,-84.1462,0,-63.6762	1/1:67:0,65,0:0:0:65,0:2170,0:-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chr06	5565480	.	A	G	149132	PASS	AB=0.491792;ABP=13.6681;AC=44;AF=0.234043;AN=188;AO=8981;CIGAR=1X;DP=28392;DPB=28392;DPRA=2.51108;EPP=19505;EPPR=42116.5;GTI=5;LEN=1;MEANALT=1.21818;MQM=59.7565;MQMR=59.9785;NS=94;NUMALT=1;ODDS=3.24038;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=319870;QR=694532;RO=19394;RPL=8981;RPP=19505;RPPR=42116.5;RPR=0;RUN=1;SAF=8981;SAP=19505;SAR=0;SRF=19394;SRP=42116.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:41:29,12:29:1044:12:432:-26.879,0,-81.9326	0/0:278:278,0:278:9943:0:0:0,-83.6863,-894.81	0/1:204:107,97:107:3828:97:3452:-249.474,0,-283.307	0/0:283:283,0:283:10172:0:0:0,-85.1915,-915.399	0/1:134:80,54:80:2852:54:1940:-134.534,0,-216.581	0/1:71:46,25:46:1648:25:888:-58.8659,0,-127.235	0/0:170:170,0:170:6072:0:0:0,-51.1751,-546.584	0/1:212:89,123:89:3196:123:4386:-331.089,0,-224.044	0/1:80:42,38:42:1508:38:1345:-96.8367,0,-111.932	0/1:135:82,53:82:2936:53:1896:-130.278,0,-223.835	0/1:329:176,153:176:6284:153:5405:-387.528,0,-466.617	0/0:62:62,0:62:2212:0:0:0,-18.6639,-199.345	0/1:65:41,24:41:1468:24:848:-57.0694,0,-112.849	0/1:46:15,31:15:528:31:1082:-83.8398,0,-34.004	0/0:55:55,0:55:1967:0:0:0,-16.5566,-177.304	0/1:50:25,25:25:884:25:892:-65.5436,0,-64.8269	0/0:60:60,0:60:2147:0:0:0,-18.0618,-193.497	0/0:49:49,0:49:1752:0:0:0,-14.7505,-157.956	0/0:205:205,0:205:7321:0:0:0,-61.7111,-658.94	0/0:286:286,0:286:10267:0:0:0,-86.0946,-923.951	0/1:180:102,78:102:3645:78:2796:-197.675,0,-274.068	0/0:284:283,1:283:10147:1:32:0,-82.2932,-909.959	0/1:173:96,76:96:3440:76:2722:-193.061,0,-257.658	0/1:184:104,80:104:3719:80:2843:-200.706,0,-279.522	0/1:108:53,55:53:1900:55:1967:-144.793,0,-138.767	0/0:407:404,3:404:14438:3:108:0,-112.444,-1289.09	0/0:240:240,0:240:8612:0:0:0,-72.2472,-775.073	0/0:38:38,0:38:1356:0:0:0,-11.4391,-122.34	0/1:403:211,192:211:7576:192:6861:-496.155,0,-560.56	0/1:390:208,182:208:7449:182:6546:-471.751,0,-553.05	0/0:222:222,0:222:7941:0:0:0,-66.8287,-714.712	0/1:1009:459,549:459:16459:549:19549:-1455.04,0,-1177.17	0/0:954:951,2:951:34051:2:72:0,-280.405,-3055.81	0/1:1419:697,719:697:24986:719:25643:-1880.13,0,-1821.4	0/1:1587:760,825:760:27204:825:29344:-2162.34,0,-1970.07	0/0:859:854,5:854:30626:5:180:0,-242.033,-2738.84	0/1:159:78,81:78:2800:81:2872:-210.85,0,-204.376	0/0:300:299,1:299:10676:1:36:0,-86.7107,-957.144	0/0:459:459,0:459:16413:0:0:0,-138.173,-1476.83	0/1:937:438,499:438:15692:499:17782:-1317.76,0,-1129.91	0/0:231:231,0:231:8287:0:0:0,-69.5379,-745.836	0/0:257:256,0:256:9166:0:0:0,-77.0637,-824.551	0/1:269:156,113:156:5576:113:4046:-283.322,0,-420.987	0/1:56:34,22:34:1204:22:780:-53.6654,0,-91.8082	0/1:68:32,36:32:1144:36:1296:-96.4716,0,-82.7995	0/1:184:74,109:74:2630:109:3878:-293.761,0,-181.499	0/1:200:91,109:91:3264:109:3859:-287.296,0,-233.774	0/0:264:264,0:264:9460:0:0:0,-79.4719,-851.356	0/0:191:191,0:191:6827:0:0:0,-57.4967,-614.499	0/1:229:114,115:114:4096:115:4082:-298.603,0,-299.888	0/1:195:111,83:111:3959:83:2944:-206.431,0,-297.185	0/1:1131:542,588:542:19445:588:20969:-1545.55,0,-1409.06	0/0:201:201,0:201:7187:0:0:0,-60.507,-646.886	0/0:72:71,1:71:2548:1:36:0,-18.0759,-225.972	0/1:1446:808,636:808:28908:636:22668:-1603.95,0,-2165.68	0/1:154:87,67:87:3120:67:2383:-168.358,0,-234.668	0/0:71:70,1:70:2489:1:36:0,-17.7749,-220.664	0/1:1159:603,556:603:21660:556:19833:-1435.52,0,-1599.88	0/1:1191:622,569:622:22284:569:20204:-1459.14,0,-1646.45	0/1:95:37,58:37:1324:58:2057:-156.795,0,-90.8642	0/0:94:94,0:94:3372:0:0:0,-28.2968,-303.695	0/1:856:455,401:455:16320:401:14271:-1026.3,0,-1210.78	0/0:239:239,0:239:8572:0:0:0,-71.9462,-771.475	0/0:313:309,3:309:11068:3:105:0,-84.4839,-986.21	0/0:98:98,0:98:3524:0:0:0,-29.5009,-317.368	0/0:145:145,0:145:5204:0:0:0,-43.6493,-468.493	0/0:300:297,3:297:10632:3:99:0,-81.0724,-947.385	0/0:158:156,2:156:5592:2:72:0,-40.726,-496.56	0/0:200:200,0:200:7150:0:0:0,-60.206,-643.557	0/0:84:84,0:84:2993:0:0:0,-25.2865,-269.601	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/1:820:460,360:460:16465:360:12812:-905.804,0,-1234.67	0/0:101:101,0:101:3632:0:0:0,-30.404,-327.084	0/1:81:44,37:44:1576:37:1324:-95.072,0,-117.748	0/1:188:99,89:99:3552:89:3180:-228.633,0,-263.294	0/0:235:235,0:235:8405:0:0:0,-70.742,-756.453	0/0:207:206,1:206:7386:1:36:0,-58.7149,-661.186	0/0:148:148,0:148:5300:0:0:0,-44.5524,-477.135	0/1:1091:520,570:520:18625:570:20367:-1503.89,0,-1346.84	0/0:151:151,0:151:5416:0:0:0,-45.4555,-487.569	0/0:151:151,0:151:5408:0:0:0,-45.4555,-486.85	0/0:265:265,0:265:9500:0:0:0,-79.7729,-854.911	0/0:83:83,0:83:2980:0:0:0,-24.9855,-268.432	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:71:32,39:32:1152:39:1392:-104.206,0,-82.617	0/0:112:112,0:112:3993:0:0:0,-33.7154,-359.56	0/1:43:19,24:19:676:24:856:-64.4168,0,-48.2237	0/0:71:71,0:71:2540:0:0:0,-21.3731,-228.851	0/0:77:77,0:77:2730:0:0:0,-23.1793,-245.943	0/0:229:229,0:229:8158:0:0:0,-68.9359,-734.239	0/1:691:331,359:331:11838:359:12714:-935.952,0,-857.21	0/1:81:34,47:34:1212:47:1652:-124.577,0,-85.0029	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:88:88,0:88:3156:0:0:0,-26.4906,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chr06	5565490	.	C	A	147597	PASS	AB=0.505127;ABP=7.01826;AC=44;AF=0.234043;AN=188;AO=8897;CIGAR=1X;DP=27156;DPB=27156;DPRA=2.36754;EPP=19322.6;EPPR=39636.7;GTI=6;LEN=1;MEANALT=1.11864;MQM=59.7546;MQMR=59.9895;NS=94;NUMALT=1;ODDS=2.20466;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=315658;QR=621427;RO=18252;RPL=8897;RPP=19322.6;RPPR=39636.7;RPR=0;RUN=1;SAF=8897;SAP=19322.6;SAR=0;SRF=18252;SRP=39636.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:39:26,13:26:891:13:464:-30.3573,0,-68.759	0/0:261:260,1:260:8785:1:36:0,-74.9706,-787.085	0/1:196:100,96:100:3427:96:3424:-249.363,0,-249.646	0/0:273:273,0:273:9430:0:0:0,-82.1812,-848.689	0/1:128:74,54:74:2495:54:1902:-132.92,0,-186.268	0/1:63:40,23:40:1312:23:820:-55.1576,0,-99.4023	0/0:155:155,0:155:5264:0:0:0,-46.6596,-473.908	0/1:203:87,116:87:2890:116:4108:-308.793,0,-199.224	0/1:79:40,39:40:1382:39:1387:-101.343,0,-100.894	0/1:128:76,52:76:2564:52:1828:-126.263,0,-192.437	0/1:320:165,155:165:5407:155:5481:-397.068,0,-390.457	0/0:54:54,0:54:1836:0:0:0,-16.2556,-165.516	0/1:60:36,24:36:1205:24:838:-57.6712,0,-90.6829	0/1:43:14,29:14:445:29:1027:-79.7979,0,-27.4108	0/0:55:55,0:55:1817:0:0:0,-16.5566,-163.802	0/1:43:21,22:21:705:22:779:-57.4832,0,-50.8186	0/0:59:59,0:59:1981:0:0:0,-17.7608,-178.56	0/0:43:43,0:43:1370:0:0:0,-12.9443,-123.578	0/0:190:190,0:190:6402:0:0:0,-57.1957,-576.3	0/0:269:269,0:269:9251:0:0:0,-80.9771,-832.586	0/1:172:91,81:91:3110:81:2869:-206.523,0,-228.352	0/0:259:259,0:259:8801:0:0:0,-77.9668,-792.117	0/1:162:89,73:89:3037:73:2592:-184.739,0,-224.795	0/1:179:100,79:100:3476:79:2792:-197.627,0,-259.171	0/1:103:51,52:51:1689:52:1855:-136.223,0,-121.277	0/0:378:375,3:375:12805:3:108:0,-103.714,-1142.25	0/0:232:232,0:232:7997:0:0:0,-69.839,-719.776	0/0:37:37,0:37:1247:0:0:0,-11.1381,-112.526	0/1:389:198,191:198:6835:191:6775:-492.649,0,-498.137	0/1:378:201,177:201:6922:177:6263:-449.914,0,-509.278	0/0:212:212,0:212:7238:0:0:0,-63.8184,-651.495	0/1:974:433,540:433:14714:540:19155:-1430.14,0,-1030.81	0/0:915:912,3:912:31330:3:108:0,-265.367,-2808.82	0/1:1383:658,724:658:22375:724:25676:-1893.34,0,-1596.91	0/1:1544:723,821:723:24676:821:29203:-2162.28,0,-1755.47	0/0:828:822,5:822:27912:5:171:0,-233.55,-2495.71	0/1:148:69,79:69:2299:79:2777:-205.615,0,-162.617	0/0:283:283,0:283:9693:0:0:0,-85.1915,-872.357	0/0:420:420,0:420:13891:0:0:0,-126.433,-1250.07	0/1:906:417,489:417:14290:489:17416:-1294.18,0,-1013.19	0/0:219:218,1:218:7543:1:36:0,-62.3273,-675.335	0/0:243:243,0:243:8139:0:0:0,-73.1503,-732.575	0/1:260:145,115:145:4936:115:4068:-288.012,0,-366.131	0/1:54:30,24:30:1004:24:837:-59.3902,0,-74.4071	0/1:66:30,36:30:1043:36:1288:-96.3533,0,-74.3109	0/1:178:68,110:68:2313:110:3911:-298.598,0,-154.842	0/1:194:84,110:84:2897:110:3901:-292.879,0,-202.569	0/0:249:249,0:249:8605:0:0:0,-74.9565,-774.473	0/0:186:186,0:186:6304:0:0:0,-55.9916,-567.469	0/1:221:108,113:108:3654:113:4004:-293.996,0,-262.539	0/1:186:101,85:101:3456:85:3007:-214.865,0,-255.264	0/1:1100:516,584:516:17665:584:20726:-1533.18,0,-1258.42	0/0:188:188,0:188:6412:0:0:0,-56.5936,-577.195	0/0:70:69,1:69:2421:1:36:0,-17.4738,-214.548	0/1:1387:761,626:761:26003:626:22214:-1580.95,0,-1922.14	0/1:144:80,63:80:2771:63:2252:-159.53,0,-206.224	0/0:68:67,1:67:2292:1:36:0,-16.8718,-202.939	0/1:1126:576,550:576:19786:550:19539:-1418.8,0,-1441.37	0/1:1161:589,571:589:20158:571:20305:-1477.36,0,-1464.31	0/1:93:37,56:37:1237:56:1962:-148.852,0,-83.6257	0/0:89:89,0:89:2986:0:0:0,-26.7917,-268.978	0/1:827:420,407:420:14347:407:14377:-1044.58,0,-1042.09	0/0:223:223,0:223:7620:0:0:0,-67.1297,-685.858	0/0:300:297,3:297:10116:3:108:0,-80.2362,-900.342	0/0:91:91,0:91:3138:0:0:0,-27.3937,-282.648	0/0:138:137,1:137:4730:1:21:0,-39.4422,-423.765	0/0:282:278,4:278:9457:4:144:0,-71.5768,-837.784	0/0:148:146,2:146:5026:2:72:0,-37.7157,-445.665	0/0:188:188,0:188:6295:0:0:0,-56.5936,-566.672	0/0:78:77,1:77:2670:1:36:0,-19.8821,-236.948	0/0:68:68,0:68:2252:0:0:0,-20.47,-202.938	0/1:786:429,356:429:14704:356:12680:-904.186,0,-1086.61	0/0:96:96,0:96:3262:0:0:0,-28.8989,-293.803	0/1:78:42,36:42:1412:36:1273:-91.3839,0,-103.886	0/1:178:93,85:93:3184:85:3044:-220.597,0,-233.202	0/0:222:222,0:222:7521:0:0:0,-66.8287,-676.964	0/0:195:195,0:195:6656:0:0:0,-58.7008,-599.144	0/0:136:136,0:136:4621:0:0:0,-40.9401,-416.064	0/1:1050:490,559:490:16691:559:19850:-1469.66,0,-1185.75	0/0:136:134,2:134:4604:2:72:0,-34.1034,-407.693	0/0:141:141,0:141:4844:0:0:0,-42.4452,-436.127	0/0:255:254,1:254:8603:1:36:0,-73.1644,-770.702	0/0:81:81,0:81:2647:0:0:0,-24.3834,-238.471	0/0:47:47,0:47:1591:0:0:0,-14.1484,-143.476	0/1:68:28,40:28:936:40:1390:-104.925,0,-64.0745	0/0:109:109,0:109:3581:0:0:0,-32.8123,-322.507	0/1:44:19,25:19:668:25:887:-66.9028,0,-47.2003	0/0:64:64,0:64:2123:0:0:0,-19.2659,-191.333	0/0:69:69,0:69:2308:0:0:0,-20.7711,-207.977	0/0:208:208,0:208:6974:0:0:0,-62.6142,-627.76	0/1:639:299,340:299:10020:340:12011:-888.405,0,-709.438	0/1:74:27,47:27:898:47:1645:-126.055,0,-58.8474	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2075	0/0:85:84,1:84:2864:1:36:0,-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chr06	5642334	.	ATCTG	TTCTA,ATCTA	588764	PASS	AB=0.554674,0.441421;ABP=215.763,247.241;AC=144,44;AF=0.765957,0.234043;AN=188;AO=18147,3643;CIGAR=1X3M1X,4M1X;DP=21876;DPB=21876.8;DPRA=0,0.943901;EPP=39408.7,7905;EPPR=13.8677;GTI=6;LEN=5,1;MEANALT=2.35106,2.68421;MQM=59.8077,59.9646;MQMR=60;NS=94;NUMALT=2;ODDS=1.11639;PAIRED=0,0;PAIREDR=0;PAO=4,0;PQA=144,0;PQR=0;PRO=0;QA=633033,130233;QR=174;RO=5;RPL=11444,1960;RPP=2692.62,48.7459;RPPR=3.44459;RPR=6703,1683;RUN=1,1;SAF=11444,1959;SAP=2692.62,48.0879;SAR=6703,1684;SRF=2;SRP=3.44459;SRR=3;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:144:0,83,61:0:0:83,61:2886,2150:-409.989,-175.399,-150.414,-234.941,0,-216.578	1/1:389:0,389,0:0:0:389,0:13634,0:-1225.77,-117.101,0,-1225.77,-117.101,-1225.77	1/2:334:0,183,147:0:0:183,147:6408,5261:-950.373,-429.014,-373.925,-521.354,0,-477.102	1/1:550:0,548,1:0:0:548,1:19135,36:-1721.39,-164.964,0,-1718.46,-161.997,-1718.15	1/2:74:0,34,39:0:0:34,39:1180,1400:-210.057,-114.199,-103.964,-95.8505,0,-84.1104	1/2:81:0,45,36:0:0:45,36:1572,1287:-233.16,-105.296,-91.7494,-128.218,0,-117.381	1/1:351:0,349,1:0:0:349,1:12152,36:-1092.86,-105.059,0,-1089.93,-102.087,-1089.62	1/2:410:0,239,168:0:0:239,168:8333,6014:-1168.02,-490.432,-418.486,-677.586,0,-627.013	1/2:325:0,165,158:0:0:165,158:5715,5630:-923.318,-458.898,-409.228,-464.412,0,-416.849	1/2:229:0,116,112:0:0:116,112:4062,4010:-657.598,-327.102,-292.183,-330.578,0,-296.863	1/2:99:0,50,49:0:0:50,49:1744,1764:-286.099,-144.293,-129.242,-142.16,0,-127.41	1/1:212:0,212,0:0:0:212,0:7345,0:-661.029,-63.8184,0,-661.029,-63.8184,-661.029	1/2:171:0,90,80:0:0:90,80:3176,2871:-492.637,-234.076,-206.984,-258.556,0,-234.474	1/2:156:1,94,61:1:36:94,61:3245,2180:-438.119,-174.806,-149.447,-260.669,0,-245.243	1/1:200:1,198,0:1:36:198,0:6945,0:-621.446,-56.6664,0,-621.747,-59.6039,-624.684	1/2:124:0,71,53:0:0:71,53:2478,1896:-356.486,-154.955,-133.582,-201.884,0,-185.93	1/1:121:0,119,1:0:0:119,1:4134,36:-371.604,-35.8226,0,-368.666,-32.8602,-368.365	1/1:129:0,129,0:0:0:129,0:4480,0:-403.094,-38.8329,0,-403.094,-38.8329,-403.094	1/1:55:0,55,0:0:0:55,0:1925,0:-173.526,-16.5567,0,-173.526,-16.5567,-173.526	1/1:571:0,569,0:0:0:569,0:19917,0:-1791.82,-171.286,0,-1791.82,-171.286,-1791.82	1/2:406:0,212,192:0:0:212,192:7339,6876:-1157.09,-560.79,-496.972,-596.329,0,-538.531	1/1:177:0,176,0:0:0:176,0:6166,0:-554.691,-52.9813,0,-554.691,-52.9813,-554.691	1/2:315:1,167,147:1:36:167,147:5842,5243:-899.37,-424.458,-377.124,-472.269,0,-430.955	1/2:263:0,148,114:0:0:148,114:5178,4075:-753.543,-332.3,-287.747,-421.287,0,-386.969	1/2:182:0,81,100:0:0:81,100:2825,3561:-519.752,-290.067,-265.684,-229.736,0,-199.633	1/1:704:0,703,0:0:0:703,0:24540,0:-2207.56,-211.624,0,-2207.56,-211.624,-2207.56	1/1:624:0,621,2:0:0:621,2:21602,72:-1943.26,-186.94,0,-1937.39,-181.03,-1936.78	1/1:76:0,76,0:0:0:76,0:2672,0:-240.727,-22.8783,0,-240.727,-22.8783,-240.727	1/2:617:0,396,220:0:0:396,220:13949,7832:-1773.91,-638.324,-519.116,-1135.58,0,-1069.35	1/2:289:0,138,149:0:0:138,149:4793,5330:-824.275,-434.639,-393.097,-389.648,0,-344.794	1/1:371:0,362,9:0:0:362,9:12614,316:-1134.48,-108.973,0,-1108.76,-83.2628,-1106.05	1/2:8:0,7,1:0:0:7,1:247,36:-23.4044,-3.29724,-1.19003,-20.4661,0,-20.1651	1/1:9:0,9,0:0:0:9,0:318,0:-28.9564,-2.70927,0,-28.9564,-2.70927,-28.9564	1/2:4:0,3,1:0:0:3,1:104,36:-11.7406,-3.29724,-2.39415,-8.79988,0,-8.49885	1/2:10:0,8,2:0:0:8,2:276,72:-28.599,-6.23466,-3.82642,-22.7211,0,-22.119	1/1:23:0,22,0:0:0:22,0:771,0:-69.4087,-6.62266,0,-69.4087,-6.62266,-69.4087	1/2:374:0,209,165:0:0:209,165:7334,5887:-1077.11,-480.272,-417.357,-597.19,0,-547.52	1/1:304:0,302,0:0:0:302,0:10347,0:-930.855,-90.9111,0,-930.855,-90.9111,-930.855	1/1:113:0,112,0:0:0:112,0:3933,0:-353.777,-33.7154,0,-353.777,-33.7154,-353.777	1/2:5:0,3,2:0:0:3,2:108,68:-14.6799,-5.85565,-4.95256,-9.17208,0,-8.57002	1/1:472:0,471,0:0:0:471,0:16457,0:-1480.13,-141.785,0,-1480.13,-141.785,-1480.13	1/1:56:0,55,0:0:0:55,0:1910,0:-171.893,-16.5567,0,-171.893,-16.5567,-171.893	1/2:367:0,184,182:0:0:184,182:6425,6528:-1055.06,-532.564,-477.174,-522.602,0,-467.815	1/2:125:0,85,40:0:0:85,40:2980,1432:-359.631,-117.136,-91.5483,-242.85,0,-230.809	1/2:119:0,70,49:0:0:70,49:2475,1747:-344.337,-142.763,-121.691,-201.929,0,-187.178	1/2:267:0,129,135:0:0:129,135:4499,4828:-759.584,-393.706,-354.873,-365.9,0,-325.261	1/2:264:0,164,99:0:0:164,99:5744,3552:-755.889,-289.815,-240.446,-466.159,0,-436.357	1/1:430:0,430,0:0:0:430,0:15021,0:-1350.61,-129.443,0,-1350.61,-129.443,-1350.61	1/1:248:0,248,0:0:0:248,0:8601,0:-774.114,-74.6554,0,-774.114,-74.6554,-774.114	1/2:280:0,167,113:0:0:167,113:5865,4026:-805.831,-328.488,-278.216,-477.697,0,-443.681	1/2:345:0,191,154:0:0:191,154:6630,5524:-989.51,-450.566,-393.069,-538.938,0,-492.58	1/2:18:0,3,15:0:0:3,15:108,534:-52.6912,-43.8783,-42.9752,-9.17208,0,-4.65663	1/1:404:0,404,0:0:0:404,0:14044,0:-1263.41,-121.616,0,-1263.41,-121.616,-1263.41	1/1:116:0,114,0:0:0:114,0:3994,0:-359.291,-34.3174,0,-359.291,-34.3174,-359.291	1/2:11:0,7,4:0:0:7,4:252,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chr06	5930217	.	G	A	55762.4	PASS	AB=0.611306;ABP=555.049;AC=49;AF=0.260638;AN=188;AO=3156;CIGAR=1X;DP=8704;DPB=8704;DPRA=1.46898;EPP=6838.82;EPPR=11468.5;GTI=3;LEN=1;MEANALT=1.07937;MQM=53.7655;MQMR=57.9158;NS=94;NUMALT=1;ODDS=0.374901;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=112821;QR=197643;RO=5537;RPL=3149;RPP=6795.51;RPPR=11468.5;RPR=7;RUN=1;SAF=3151;SAP=6812.82;SAR=5;SRF=5537;SRP=12026.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:16,45:16:572:45:1571:-122.742,0,-33.3209	0/1:119:42,77:42:1508:77:2757:-211.233,0,-100.126	0/1:89:40,49:40:1432:49:1758:-130.892,0,-102.051	0/0:89:89,0:89:3181:0:0:0,-26.7917,-286.335	0/0:37:37,0:37:1283:0:0:0,-11.1381,-114.712	0/0:44:44,0:44:1561:0:0:0,-13.2453,-140.459	0/0:108:105,2:105:3723:2:72:0,-25.6382,-328.426	0/1:120:38,82:38:1364:82:2916:-224.85,0,-86.7849	0/1:107:37,70:37:1317:70:2492:-191.724,0,-86.4383	0/1:91:25,63:25:900:63:2260:-176.415,0,-52.5969	0/1:185:99,86:99:3544:86:3086:-220.917,0,-262.915	0/0:99:99,0:99:3560:0:0:0,-29.802,-319.712	0/1:113:66,47:66:2368:47:1673:-116.409,0,-179.116	0/1:164:78,86:78:2788:86:3092:-228.16,0,-201.403	0/0:99:98,1:98:3505:1:36:0,-26.2155,-311.63	0/1:84:52,32:52:1864:32:1152:-78.3855,0,-142.447	0/1:163:83,80:83:2965:80:2872:-208.589,0,-217.534	0/0:76:76,0:76:2728:0:0:0,-22.8783,-244.164	0/0:106:106,0:106:3816:0:0:0,-31.9092,-342.39	0/1:252:42,208:42:1474:208:7449:-593.917,0,-57.0489	0/1:130:36,94:36:1265:94:3350:-261.248,0,-74.9544	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.2714	0/1:90:16,74:16:572:74:2656:-211.805,0,-24.6899	0/1:102:21,81:21:741:81:2916:-230.948,0,-36.2538	0/1:78:23,55:23:824:55:1976:-154.342,0,-50.8664	0/0:137:137,0:137:4893:0:0:0,-41.2411,-440.392	0/0:162:162,0:162:5691:0:0:0,-48.7669,-511.687	0/0:62:62,0:62:2220:0:0:0,-18.6639,-199.964	0/1:170:50,120:50:1773:120:4286:-334.516,0,-108.496	0/1:71:11,60:11:392:60:2146:-171.67,0,-14.2469	0/1:114:43,71:43:1502:71:2533:-193.431,0,-101.08	0/0:12:12,0:12:417:0:0:0,-3.61236,-36.1338	0/0:29:29,0:29:1044:0:0:0,-8.72987,-92.7716	0/1:7:4,3:4:144:3:108:-7.94263,0,-11.2001	0/1:7:4,3:4:144:3:108:-7.94263,0,-11.2001	0/0:17:17,0:17:597:0:0:0,-5.11751,-53.8043	0/1:264:130,134:130:4648:134:4803:-352.465,0,-338.535	0/0:59:58,0:58:2076:0:0:0,-17.4597,-186.698	0/1:137:70,67:70:2516:67:2380:-171.627,0,-184.688	0/1:8:2,6:2:72:6:216:-17.3506,0,-4.42848	0/0:76:76,0:76:2705:0:0:0,-22.8783,-240.276	0/0:55:55,0:55:1957:0:0:0,-16.5566,-175.868	0/1:124:45,78:45:1593:78:2785:-212.674,0,-106.08	0/1:154:69,85:69:2469:85:3043:-227.456,0,-175.91	0/1:75:25,50:25:900:50:1800:-139.552,0,-58.7153	0/0:62:61,1:61:2173:1:36:0,-15.0656,-192.028	0/1:125:15,110:15:521:110:3924:-314.513,0,-9.56675	0/0:105:105,0:105:3719:0:0:0,-31.6081,-334.166	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.154	0/1:100:32,68:32:1133:68:2444:-189.849,0,-72.1045	0/0:73:73,0:73:2613:0:0:0,-21.9752,-234.697	0/1:9:2,7:2:72:7:252:-20.3031,0,-4.09756	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.029	0/1:36:13,23:13:468:23:828:-63.8726,0,-31.6226	0/1:11:3,8:3:108:8:288:-22.89,0,-6.75905	0/1:88:38,50:38:1368:50:1785:-134.189,0,-96.8381	0/0:50:50,0:50:1766:0:0:0,-15.0515,-158.806	0/1:8:6,2:6:216:2:72:-4.42657,0,-17.3823	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.6551	0/1:102:35,67:35:1252:67:2397:-184.501,0,-82.2469	0/0:182:181,1:181:6485:1:36:0,-51.1918,-578.206	0/1:6:3,3:3:108:3:108:-8.26172,0,-8.26899	0/0:44:44,0:44:1576:0:0:0,-13.2453,-141.792	0/0:114:113,1:113:4030:1:36:0,-30.7217,-358.826	0/1:110:40,67:40:1440:67:2364:-179.916,0,-95.4372	0/0:42:42,0:42:1508:0:0:0,-12.6433,-135.931	0/0:66:62,4:62:2190:4:144:0,-6.56396,-182.314	0/0:40:39,1:39:1377:1:36:0,-8.44552,-120.502	0/0:100:98,2:98:3509:2:72:0,-23.276,-308.887	0/0:57:57,0:57:2018:0:0:0,-17.1587,-181.73	0/0:210:209,1:209:7481:1:36:0,-59.619,-668.668	0/1:25:7,18:7:252:18:648:-51.078,0,-15.5016	0/1:87:23,64:23:820:64:2266:-176.33,0,-47.8864	0/1:71:29,42:29:1040:42:1512:-114.129,0,-72.3014	0/1:226:67,159:67:2385:159:5699:-443.393,0,-146.756	0/0:72:72,0:72:2592:0:0:0,-21.6742,-233.368	0/0:69:68,1:68:2444:1:21:0,-18.6714,-217.705	0/0:73:72,1:72:2558:1:36:0,-18.386,-226.567	0/1:10:6,4:6:216:4:144:-10.2698,0,-16.7708	0/0:93:91,2:91:3264:2:72:0,-21.1688,-286.624	0/0:64:64,0:64:2245:0:0:0,-19.2659,-201.379	0/0:112:112,0:112:4005:0:0:0,-33.7154,-360.324	0/1:130:63,67:63:2249:67:2393:-176.034,0,-163.323	0/0:87:87,0:87:3120:0:0:0,-26.1896,-280.665	0/1:126:65,61:65:2336:61:2175:-157.721,0,-172.469	0/1:236:113,123:113:4053:123:4386:-323.277,0,-293.209	0/1:54:26,28:26:928:28:1004:-74.1441,0,-65.4702	0/0:109:109,0:109:3890:0:0:0,-32.8123,-349.51	0/0:97:96,1:96:3441:1:21:0,-27.1084,-307.102	0/1:144:66,78:66:2361:78:2785:-206.905,0,-168.412	0/1:233:129,104:129:4592:104:3744:-265.589,0,-342.215	0/1:114:37,77:37:1332:77:2729:-211.012,0,-85.8366	0/0:77:76,1:76:2712:1:36:0,-19.5836,-237.867	0/0:153:153,0:153:5465:0:0:0,-46.0576,-491.816
chr06	5930222	.	T	C	110438	PASS	AB=0.385057;ABP=582.07;AC=139;AF=0.739362;AN=188;AO=5418;CIGAR=1X;DP=8544;DPB=8544;DPRA=0;EPP=10915.5;EPPR=6745.48;GTI=4;LEN=1;MEANALT=1.05319;MQM=57.9677;MQMR=53.8113;NS=94;NUMALT=1;ODDS=0.529791;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=191685;QR=110931;RO=3121;RPL=100;RPP=10915.5;RPPR=6702.23;RPR=5318;RUN=1;SAF=5418;SAP=11768;SAR=0;SRF=3116;SRP=6736.82;SRR=5;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:42,15:42:1500:15:531:-30.8049,0,-117.524	0/1:117:75,42:75:2680:42:1495:-99.3724,0,-205.138	0/1:86:46,40:46:1635:40:1416:-101.628,0,-120.832	1/1:87:0,87:0:0:87:3120:-280.834,-26.1896,0	1/1:36:0,36:0:0:36:1255:-112.527,-10.8371,0	1/1:44:0,44:0:0:44:1555:-140.113,-13.2453,0	1/1:108:2,106:2:72:106:3777:-333.234,-25.6794,0	0/1:116:79,37:79:2790:37:1324:-84.4207,0,-214.517	0/1:106:69,37:69:2462:37:1289:-84.2762,0,-188.904	0/1:88:63,25:63:2260:25:875:-51.6902,0,-176.77	0/1:179:83,96:83:2923:96:3355:-247.638,0,-208.075	1/1:100:0,100:0:0:100:3545:-318.401,-30.103,0	0/1:112:47,65:47:1649:65:2317:-174.93,0,-114.626	0/1:158:85,73:85:3044:73:2571:-183.798,0,-225.659	1/1:98:0,98:0:0:98:3500:-314.809,-29.5009,0	0/1:83:32,51:32:1152:51:1805:-137.658,0,-78.6865	0/1:164:81,82:81:2847:82:2902:-211.568,0,-206.026	1/1:76:0,76:0:0:76:2677:-239.924,-22.8783,0	1/1:104:0,104:0:0:104:3648:-327.335,-31.3071,0	0/1:247:207,40:207:7389:40:1411:-52.5379,0,-589.471	0/1:130:95,35:95:3354:35:1229:-71.7075,0,-261.145	1/1:23:0,23:0:0:23:805:-72.3781,-6.92369,0	0/1:86:70,16:70:2512:16:572:-25.894,0,-200.059	0/1:100:80,20:80:2816:20:716:-34.6119,0,-222.585	0/1:74:52,22:52:1872:22:775:-47.6974,0,-146.22	1/1:134:0,134:0:0:134:4760:-428.45,-40.338,0	1/1:158:0,158:0:0:158:5596:-503.085,-47.5627,0	1/1:60:0,60:0:0:60:2148:-193.492,-18.0618,0	0/1:168:117,51:117:4183:51:1816:-113.001,0,-325.843	0/1:72:63,9:63:2214:9:324:-7.8317,0,-177.559	0/1:110:69,41:69:2444:41:1463:-98.7946,0,-186.716	1/1:11:0,11:0:0:11:375:-33.3519,-3.31133,0	1/1:28:0,28:0:0:28:986:-88.6312,-8.42884,0	0/1:7:3,4:3:108:4:144:-11.2001,0,-7.94263	0/1:6:2,4:2:72:4:144:-11.5011,0,-5.01335	1/1:16:0,16:0:0:16:567:-51.1057,-4.81648,0	0/1:260:132,128:132:4705:128:4548:-330.709,0,-344.822	1/1:56:0,56:0:0:56:1956:-176.272,-16.8577,0	0/1:131:63,68:63:2239:68:2400:-176.071,0,-160.965	0/1:8:6,2:6:216:2:68:-4.04947,0,-17.3506	1/1:75:0,75:0:0:75:2632:-235.302,-22.5773,0	1/1:54:0,54:0:0:54:1922:-172.718,-16.2556,0	0/1:121:76,45:76:2698:45:1599:-107.61,0,-206.114	0/1:152:85,67:85:3024:67:2383:-168.915,0,-226.271	0/1:76:51,25:51:1820:25:891:-57.6021,0,-141.06	1/1:59:1,58:1:36:58:2064:-182.331,-14.1625,0	0/1:125:110,15:110:3924:15:528:-10.2021,0,-314.571	1/1:101:0,101:0:0:101:3535:-318.167,-30.404,0	1/1:48:0,48:0:0:48:1712:-154.237,-14.4494,0	0/1:94:67,27:67:2391:27:947:-57.1786,0,-186.899	1/1:71:0,71:0:0:71:2514:-226.172,-21.3731,0	0/1:9:7,2:7:252:2:68:-3.73625,0,-20.3031	1/1:65:0,65:0:0:65:2319:-208.303,-19.567,0	0/1:36:23,13:23:820:13:468:-31.6226,0,-63.1521	0/1:11:8,3:8:288:3:108:-6.75905,0,-22.89	0/1:90:52,38:52:1842:38:1340:-93.7219,0,-138.472	1/1:47:0,47:0:0:47:1656:-148.973,-14.1484,0	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42657	1/1:15:0,15:0:0:15:531:-48.1219,-4.51545,0	0/1:100:67,33:67:2377:33:1180:-76.392,0,-183.325	1/1:180:2,178:2:72:178:6294:-558.745,-47.3511,0	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26172	1/1:42:0,42:0:0:42:1500:-135.128,-12.6433,0	1/1:110:1,109:1:36:109:3851:-342.889,-29.5176,0	0/1:111:70,40:70:2491:40:1399:-92.5756,0,-190.324	1/1:42:0,42:0:0:42:1491:-134.453,-12.6433,0	1/1:62:4,58:4:144:58:2062:-172.129,-5.35985,0	1/1:40:1,39:1:36:39:1367:-119.598,-8.44552,0	1/1:103:2,101:2:72:101:3555:-312.972,-24.1791,0	1/1:55:0,54:0:0:54:1931:-173.551,-16.2556,0	1/1:202:1,201:1:36:201:7143:-638.452,-57.2108,0	0/1:25:18,7:18:631:7:248:-15.1369,0,-49.5467	0/1:86:63,23:63:2252:23:816:-47.8248,0,-174.843	0/1:70:42,28:42:1504:28:993:-68.4973,0,-113.726	0/1:220:153,67:153:5438:67:2360:-145.827,0,-421.851	1/1:71:0,71:0:0:71:2527:-227.565,-21.3731,0	1/1:69:1,67:1:36:67:2350:-207.861,-17.2382,0	1/1:76:1,75:1:36:75:2639:-233.964,-19.2891,0	0/1:10:4,6:4:144:6:212:-16.406,0,-10.2698	1/1:90:2,88:2:72:88:3116:-273.504,-20.2657,0	1/1:60:0,60:0:0:60:2096:-188.349,-18.0618,0	1/1:111:0,110:0:0:110:3897:-349.159,-33.1133,0	0/1:128:67,61:67:2377:61:2153:-155.43,0,-175.194	1/1:86:0,86:0:0:86:3066:-275.893,-25.8886,0	0/1:126:59,67:59:2076:67:2358:-174.48,0,-148.908	0/1:235:124,111:124:4396:111:3912:-281.026,0,-324.503	0/1:53:30,23:30:1056:23:813:-56.0021,0,-78.9351	1/1:105:0,105:0:0:105:3708:-333.302,-31.6082,0	1/1:95:1,94:1:32:94:3347:-297.686,-25.4951,0	0/1:141:78,63:78:2755:63:2207:-156.01,0,-205.098	0/1:234:104,130:104:3686:130:4573:-340.69,0,-260.165	0/1:114:77,37:77:2727:37:1299:-82.8878,0,-210.609	1/1:74:1,73:1:36:73:2587:-226.326,-18.6805,0	1/1:151:0,151:0:0:151:5334:-480.014,-45.4555,0
chr06	6225059	.	G	A	113903	PASS	AB=0.420752;ABP=251.157;AC=139;AF=0.739362;AN=188;AO=5591;CIGAR=1X;DP=8243;DPB=8243;DPRA=0;EPP=12143.7;EPPR=5755.24;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.9746;MQMR=60;NS=94;NUMALT=1;ODDS=3.27574;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199126;QR=91909;RO=2649;RPL=1;RPP=12135;RPPR=5755.24;RPR=5590;RUN=1;SAF=1;SAP=12135;SAR=5590;SRF=0;SRP=5755.24;SRR=2649;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:28:13,15:13:427:15:531:-39.6931,0,-30.3154	0/1:104:67,37:67:2364:37:1320:-87.7948,0,-181.71	0/1:101:65,36:65:2293:36:1271:-84.2881,0,-176.227	1/1:127:0,127:0:0:127:4512:-406.251,-38.2308,0	1/1:30:0,30:0:0:30:1063:-95.9808,-9.0309,0	1/1:45:1,44:1:36:44:1555:-136.643,-9.94808,0	1/1:99:0,99:0:0:99:3521:-317.1,-29.802,0	0/1:165:85,80:85:2881:80:2868:-208.687,0,-209.855	0/1:84:59,25:59:2028:25:892:-55.3132,0,-157.502	0/1:80:52,28:52:1794:28:1000:-66.233,0,-137.655	0/1:134:62,72:62:2171:72:2573:-191.481,0,-155.316	1/1:87:0,87:0:0:87:3087:-278.059,-26.1896,0	0/1:66:29,37:29:983:37:1324:-99.5941,0,-68.9066	0/1:131:67,64:67:2347:64:2271:-165.215,0,-172.056	1/1:58:0,58:0:0:58:2072:-186.751,-17.4597,0	0/1:65:30,35:30:1064:35:1229:-91.3447,0,-76.5047	0/1:99:57,42:57:1978:42:1504:-105.808,0,-148.489	1/1:85:2,83:2:68:83:2958:-259.995,-19.1298,0	1/1:57:0,57:0:0:57:2039:-183.781,-17.1587,0	0/1:132:78,54:78:2683:54:1923:-133.61,0,-201.977	0/1:147:91,56:91:3134:56:1989:-135.031,0,-238.038	1/1:56:1,55:1:36:55:1967:-173.706,-13.2594,0	0/1:68:41,27:41:1443:27:964:-66.6068,0,-109.695	0/1:99:59,39:59:2058:39:1392:-95.7572,0,-155.667	0/1:52:28,24:28:992:24:860:-62.0683,0,-73.9408	1/1:238:1,237:1:36:237:8406:-752.952,-68.0469,0	1/1:109:0,109:0:0:109:3900:-351.193,-32.8123,0	1/1:37:0,37:0:0:37:1319:-119.011,-11.1381,0	0/1:174:114,60:114:3970:60:2152:-141.568,0,-305.114	0/1:138:105,33:105:3654:33:1175:-64.5086,0,-287.525	0/1:121:74,47:74:2603:47:1667:-113.891,0,-198.093	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:30:0,30:0:0:30:1072:-96.7925,-9.0309,0	0/1:5:4,1:4:135:1:36:-2.09312,0,-10.9774	0/1:14:8,6:8:284:6:216:-15.5761,0,-21.6889	1/1:19:0,19:0:0:19:668:-60.4457,-5.71957,0	0/1:183:87,95:87:3010:95:3386:-249.918,0,-216.094	1/1:180:0,180:0:0:180:6415:-577.441,-54.1854,0	0/1:134:58,76:58:1960:76:2720:-204.705,0,-136.334	0/1:5:3,2:3:104:2:64:-4.57354,0,-8.19766	1/1:73:0,73:0:0:73:2609:-235.058,-21.9752,0	1/1:60:0,60:0:0:60:2130:-191.967,-18.0618,0	0/1:100:68,32:68:2392:32:1127:-71.6327,0,-185.436	0/1:74:38,36:38:1328:36:1283:-93.2252,0,-97.5407	0/1:54:36,18:36:1246:18:648:-42.3963,0,-96.1846	1/1:104:0,104:0:0:104:3717:-334.73,-31.3071,0	0/1:92:61,31:61:2106:31:1108:-72.3362,0,-162.112	1/1:115:0,115:0:0:115:4089:-368.198,-34.6185,0	1/1:46:0,46:0:0:46:1640:-147.889,-13.8474,0	0/1:110:71,39:71:2457:39:1400:-93.1859,0,-188.271	1/1:121:2,119:2:72:119:4260:-376.741,-29.5879,0	0/1:25:6,19:6:208:19:675:-53.5512,0,-11.5333	1/1:113:0,113:0:0:113:4040:-363.788,-34.0164,0	0/1:52:38,14:38:1322:14:496:-29.3207,0,-103.624	0/1:44:17,27:17:591:27:968:-74.192,0,-40.2699	0/1:95:77,18:77:2668:18:640:-29.3315,0,-211.768	1/1:42:0,42:0:0:42:1492:-134.575,-12.6433,0	0/1:17:9,8:9:320:8:288:-21.1499,0,-24.0248	1/1:38:0,38:0:0:38:1343:-121.169,-11.4391,0	0/1:118:71,47:71:2483:47:1666:-114.69,0,-188.201	1/1:139:1,138:1:36:138:4923:-439.622,-38.2449,0	0/1:10:9,1:9:320:1:36:-0.587975,0,-26.1321	1/1:85:0,85:0:0:85:3040:-273.828,-25.5876,0	1/1:113:3,110:3:108:110:3887:-339.949,-23.9412,0	0/1:95:57,38:57:1975:38:1364:-94.4629,0,-149.424	1/1:53:0,53:0:0:53:1892:-170.558,-15.9546,0	1/1:138:1,137:1:32:137:4860:-434.33,-38.3428,0	1/1:73:0,73:0:0:73:2596:-233.888,-21.9752,0	1/1:53:0,53:0:0:53:1877:-169.207,-15.9546,0	1/1:50:0,50:0:0:50:1788:-161.203,-15.0515,0	1/1:103:0,103:0:0:103:3670:-330.504,-31.0061,0	0/1:43:21,22:21:729:22:776:-57.2179,0,-52.9844	0/1:152:87,65:87:3013:65:2328:-164.023,0,-225.644	0/1:86:46,40:46:1596:40:1389:-99.4131,0,-118.038	0/1:245:149,95:149:5236:95:3382:-230.783,0,-397.573	1/1:60:2,58:2:68:58:2068:-179.933,-11.6041,0	1/1:78:0,78:0:0:78:2778:-250.215,-23.4803,0	1/1:146:2,144:2:63:144:5085:-451.811,-37.9672,0	0/1:30:16,14:16:576:14:485:-34.9461,0,-43.1441	1/1:56:0,56:0:0:56:2004:-180.634,-16.8577,0	1/1:54:0,54:0:0:54:1936:-174.516,-16.2556,0	1/1:122:0,122:0:0:122:4367:-393.203,-36.7257,0	0/1:92:51,41:51:1764:41:1464:-104.361,0,-131.343	1/1:78:1,77:1:36:77:2755:-244.593,-19.8821,0	0/1:85:49,36:49:1648:36:1245:-86.7594,0,-123.011	0/1:151:92,59:92:3112:59:2099:-143.724,0,-234.853	0/1:37:21,16:21:740:16:572:-40.6753,0,-55.7853	1/1:117:0,117:0:0:117:4183:-376.652,-35.2205,0	1/1:64:0,64:0:0:64:2278:-205.281,-19.2659,0	0/1:108:53,55:53:1831:55:1958:-143.984,0,-132.556	0/1:240:111,129:111:3863:129:4618:-343.535,0,-275.62	0/1:65:42,23:42:1434:23:819:-54.4646,0,-109.783	1/1:42:0,42:0:0:42:1512:-136.375,-12.6433,0	1/1:91:0,91:0:0:91:3236:-291.461,-27.3937,0
chr06	7342076	.	A	G	14466.8	PASS	AB=0.500846;ABP=3.02132;AC=48;AF=0.255319;AN=188;AO=891;CIGAR=1X;DP=4275;DPB=4275;DPRA=0.691961;EPP=1937.79;EPPR=7349.1;GTI=1;LEN=1;MEANALT=1.01961;MQM=53.5455;MQMR=59.4437;NS=94;NUMALT=1;ODDS=1.68644;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=31893;QR=121272;RO=3383;RPL=0;RPP=1937.79;RPPR=7349.1;RPR=891;RUN=1;SAF=891;SAP=1937.79;SAR=0;SRF=3383;SRP=7349.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:15,22:15:540:22:792:-59.5524,0,-37.7984	0/1:39:13,26:13:464:26:930:-72.0164,0,-30.3379	0/1:89:39,50:39:1392:50:1773:-131.21,0,-98.6731	0/0:101:100,1:100:3576:1:36:0,-26.8083,-317.994	0/1:14:4,10:4:144:10:356:-28.1052,0,-9.0992	0/1:14:10,4:10:360:4:144:-9.06573,0,-28.516	0/0:32:31,1:31:1116:1:36:0,-6.03728,-97.1513	0/1:57:13,44:13:468:44:1580:-124.681,0,-25.3009	0/1:44:26,18:26:936:18:644:-44.8971,0,-71.3141	0/1:57:25,32:25:896:32:1152:-86.7564,0,-63.7946	0/1:22:6,16:6:216:16:576:-45.5124,0,-13.1631	0/0:75:75,0:75:2700:0:0:0,-22.5772,-243.233	0/1:40:16,24:16:576:24:860:-65.4836,0,-40.1256	0/1:31:19,12:19:680:12:432:-29.8301,0,-52.14	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.667	0/1:37:21,16:21:756:16:572:-40.438,0,-57.1426	0/1:18:11,7:11:392:7:228:-15.3484,0,-30.1805	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2366	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4376	0/1:45:23,22:23:828:22:780:-56.7378,0,-61.2954	0/1:71:35,36:35:1226:36:1296:-94.9891,0,-89.0614	0/0:43:43,0:43:1533:0:0:0,-12.9443,-138.259	0/1:24:19,5:19:680:5:180:-9.31541,0,-54.2965	0/1:22:15,7:15:540:7:248:-16.0117,0,-42.2826	0/1:40:11,29:11:392:29:1040:-81.7257,0,-23.5789	0/0:168:168,0:168:6013:0:0:0,-50.573,-540.261	0/0:114:114,0:114:4076:0:0:0,-34.3174,-366.897	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:109:61,48:61:2188:48:1728:-122.758,0,-164.367	0/1:68:38,30:38:1368:30:1080:-76.608,0,-102.937	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.708	0/1:9:5,4:5:180:4:144:-10.5855,0,-13.8428	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4198	0/1:4:1,3:1:21:3:108:-8.84572,0,-0.895826	0/1:9:4,5:4:144:5:176:-12.9449,0,-10.6043	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:108:56,52:56:2016:52:1860:-134.954,0,-149.201	0/0:94:94,0:94:3376:0:0:0,-28.2968,-303.627	0/1:26:17,9:17:612:9:320:-21.2184,0,-47.5703	0/1:5:1,4:1:32:4:144:-11.7896,0,-1.69416	0/0:64:64,0:64:2288:0:0:0,-19.2659,-206.168	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:47:25,22:25:900:22:788:-56.5104,0,-67.1588	0/1:30:18,12:18:644:12:428:-29.7873,0,-49.2578	0/1:27:12,15:12:432:15:540:-40.762,0,-31.091	0/1:46:19,27:19:676:27:964:-73.1464,0,-47.3188	0/1:58:26,31:26:932:31:1116:-82.6054,0,-66.6731	0/0:96:96,0:96:3456:0:0:0,-28.8989,-310.597	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:81:43,38:43:1540:38:1360:-98.1478,0,-114.503	0/1:48:36,12:36:1292:12:432:-24.7608,0,-102.132	0/1:9:7,2:7:252:2:72:-4.12252,0,-20.3173	0/0:94:94,0:94:3376:0:0:0,-28.2968,-303.579	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:8:5,3:5:180:3:108:-7.6416,0,-14.1438	0/1:44:20,24:20:716:24:860:-64.2253,0,-51.5132	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5035	0/1:4:2,2:2:72:2:72:-5.63069,0,-5.6326	0/1:11:4,7:4:144:7:252:-19.6666,0,-10.0023	0/1:45:26,19:26:932:19:680:-47.7651,0,-70.4961	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.512	0/1:4:1,3:1:36:3:108:-8.86378,0,-2.39415	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.241	0/0:81:81,0:81:2897:0:0:0,-24.3834,-260.054	0/0:53:53,0:53:1878:0:0:0,-15.9546,-169.227	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.081	0/0:91:91,0:91:3272:0:0:0,-27.3937,-293.669	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.16	0/0:21:20,1:20:720:1:36:0,-2.72846,-61.5264	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.174	0/0:68:68,0:68:2435:0:0:0,-20.47,-219.032	0/1:7:4,3:4:144:3:108:-7.96069,0,-11.204	0/0:91:91,0:91:3264:0:0:0,-27.3937,-293.931	0/1:59:33,26:33:1184:26:921:-64.6871,0,-89.1072	0/1:77:38,39:38:1360:39:1402:-102.562,0,-99.5121	0/0:98:98,0:98:3524:0:0:0,-29.5009,-317.187	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.943	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.289	0/1:13:8,5:8:288:5:176:-11.7373,0,-22.3458	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.564	0/0:23:23,0:23:824:0:0:0,-6.92369,-73.3675	0/0:67:67,0:67:2389:0:0:0,-20.169,-215.068	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.736	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.771	0/1:16:8,8:8:288:8:284:-21.0694,0,-21.4505	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.51	0/1:14:7,7:7:248:7:252:-18.7566,0,-18.4498	0/0:49:49,0:49:1752:0:0:0,-14.7505,-157.917	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.806	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.071	0/1:51:25,26:25:896:26:927:-68.1132,0,-65.5986	0/1:35:13,22:13:464:22:792:-60.9202,0,-31.5591	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9073	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.154
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chr06	7692848	.	G	A	10872.8	PASS	AB=0.481953;ABP=7.00747;AC=34;AF=0.180851;AN=188;AO=712;CIGAR=1X;DP=5241;DPB=5241;DPRA=0.921188;EPP=1549.1;EPPR=9831.09;GTI=2;LEN=1;MEANALT=1;MQM=59.9803;MQMR=59.9867;NS=94;NUMALT=1;ODDS=4.99031;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=25333;QR=162026;RO=4526;RPL=712;RPP=1549.1;RPPR=9831.09;RPR=0;RUN=1;SAF=0;SAP=1549.1;SAR=712;SRF=0;SRP=9831.09;SRR=4526;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/0:57:56,1:56:1992:1:36:0,-13.5604,-175.956	0/1:34:18,16:18:644:16:556:-40.1308,0,-48.0556	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:13:6,7:6:216:7:237:-17.7457,0,-15.8771	0/1:16:10,6:10:352:6:212:-14.6083,0,-27.2017	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/1:46:19,27:19:676:27:972:-73.9505,0,-47.3206	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/1:29:11,18:11:396:18:640:-49.1994,0,-27.2529	0/0:210:193,17:193:6892:17:608:0,-8.16428,-565.298	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.464	0/1:51:18,33:18:640:33:1171:-90.3441,0,-42.5768	0/1:91:37,54:37:1324:54:1928:-146.403,0,-92.0684	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.239	0/1:56:26,30:26:936:30:1065:-79.3042,0,-67.7018	0/1:69:27,42:27:968:42:1478:-112.532,0,-66.6663	0/0:30:30,0:30:1068:0:0:0,-9.0309,-96.4321	0/0:139:138,0:138:4940:0:0:0,-41.5421,-444.39	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/1:36:9,27:9:324:27:956:-75.5168,0,-18.6688	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:9:2,7:2:72:7:244:-19.5902,0,-4.12745	0/1:23:10,13:10:360:13:468:-35.536,0,-25.8206	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	0/0:42:42,0:42:1496:0:0:0,-12.6433,-134.935	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:37:13,24:13:468:24:852:-65.8623,0,-31.3215	0/1:27:16,11:16:576:11:396:-27.8549,0,-44.0472	0/0:24:23,1:23:828:1:36:0,-3.62644,-71.2458	0/0:83:82,1:82:2940:1:36:0,-21.3872,-261.234	0/0:105:105,0:105:3760:0:0:0,-31.6081,-338.6	0/0:91:90,0:90:3228:0:0:0,-27.0927,-290.382	0/0:212:212,0:212:7576:0:0:0,-63.8184,-681.881	0/0:143:143,0:143:5108:0:0:0,-43.0473,-459.864	0/1:97:41,56:41:1472:56:2008:-151.793,0,-103.576	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/1:218:194,24:194:6944:24:864:-12.458,0,-559.401	0/0:88:88,0:88:3156:0:0:0,-26.4906,-284.265	0/0:45:45,0:45:1608:0:0:0,-13.5463,-145.01	0/0:143:143,0:143:5124:0:0:0,-43.0473,-461.302	0/1:26:9,17:9:324:17:604:-46.8638,0,-21.6791	0/1:32:15,17:15:540:17:600:-44.6962,0,-39.3036	0/1:35:15,20:15:540:20:716:-54.2317,0,-38.4005	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/1:15:8,7:8:288:7:252:-18.5135,0,-21.752	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/1:45:17,28:17:612:28:985:-75.416,0,-41.8671	0/1:31:12,19:12:432:19:680:-52.1972,0,-29.8893	0/0:109:108,1:108:3876:1:36:0,-29.214,-345.436	0/0:46:46,0:46:1625:0:0:0,-13.8474,-146.537	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5702	0/0:62:61,1:61:2172:1:36:0,-15.0656,-192.149	0/1:31:16,15:16:576:15:532:-38.8812,0,-42.8431	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:68:68,0:68:2436:0:0:0,-20.47,-219.495	0/0:164:162,2:162:5777:2:72:0,-42.5322,-513.209	0/1:21:15,6:15:540:6:212:-13.1032,0,-42.6149	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/0:17:16,1:16:576:1:36:0,-1.51923,-48.5767	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.909	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/0:209:209,0:209:7492:0:0:0,-62.9153,-674.321	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/0:131:129,2:129:4628:2:72:0,-32.5982,-409.845	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:29:13,16:13:464:16:576:-43.4451,0,-33.3676	0/1:82:48,34:48:1720:34:1216:-85.0621,0,-130.401	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:39:38,1:38:1364:1:36:0,-8.14189,-119.462	0/0:116:115,1:115:4108:1:36:0,-31.3212,-366.308	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.3154	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.296	0/0:70:69,0:69:2464:0:0:0,-20.7711,-221.655	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/1:58:31,27:31:1116:27:960:-69.2565,0,-83.292	0/0:64:63,1:63:2260:1:36:0,-15.6676,-200.064	0/1:18:9,9:9:320:9:324:-24.0873,0,-23.7238	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:311:311,0:311:11120:0:0:0,-93.6203,-1000.69	0/1:57:24,33:24:864:33:1164:-87.9082,0,-60.9239	0/1:33:16,17:16:568:17:597:-44.1221,0,-41.5179	0/0:24:23,1:23:824:1:36:0,-3.62644,-70.8566	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018
chr06	8514807	.	T	C	170636	PASS	AB=0.507277;ABP=4.96972;AC=142;AF=0.755319;AN=188;AO=7961;CIGAR=1X;DP=10076;DPB=10076;DPRA=0;EPP=17272.7;EPPR=4593.5;GTI=2;LEN=1;MEANALT=1.01064;MQM=59.9917;MQMR=60;NS=94;NUMALT=1;ODDS=1.88911;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=284649;QR=75572;RO=2114;RPL=2;RPP=17272.7;RPPR=4593.5;RPR=7959;RUN=1;SAF=0;SAP=17290.1;SAR=7961;SRF=0;SRP=4593.5;SRR=2114;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:71:40,31:40:1428:31:1116:-79.3786,0,-107.444	1/1:68:0,68:0:0:68:2440:-219.855,-20.47,0	0/1:138:57,81:57:2036:81:2900:-219.694,0,-141.97	1/1:256:0,256:0:0:256:9175:-825.718,-77.0637,0	0/1:56:23,33:23:820:33:1173:-89.0179,0,-57.2648	0/1:74:27,47:27:972:47:1674:-128.669,0,-65.5217	1/1:149:0,149:0:0:149:5317:-478.665,-44.8535,0	0/1:135:63,72:63:2264:72:2584:-192.17,0,-163.383	0/1:108:40,68:40:1432:68:2448:-188.063,0,-96.6664	0/1:146:80,66:80:2868:66:2347:-167.538,0,-214.407	0/1:49:16,33:16:576:33:1180:-91.7576,0,-37.4245	1/1:122:0,122:0:0:122:4356:-392.216,-36.7257,0	0/1:77:45,32:45:1616:32:1152:-80.8108,0,-122.551	0/1:73:42,31:42:1504:31:1116:-78.7765,0,-113.679	1/1:91:1,90:1:36:90:3203:-284.895,-23.7955,0	0/1:78:40,38:40:1421:38:1368:-99.9405,0,-104.705	0/1:53:22,31:22:784:31:1112:-84.4368,0,-54.9293	1/1:32:0,32:0:0:32:1139:-102.818,-9.63296,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:243:0,243:0:0:243:8694:-782.449,-73.1503,0	0/1:207:104,103:104:3724:103:3704:-271.247,0,-273.048	1/1:110:0,110:0:0:110:3921:-353.083,-33.1133,0	0/1:183:91,92:91:3268:92:3272:-239.611,0,-239.251	0/1:120:65,55:65:2324:55:1965:-141,0,-173.297	0/1:75:27,48:27:964:48:1720:-132.508,0,-64.4996	1/1:254:1,253:1:36:253:9036:-809.618,-72.8633,0	1/1:156:0,156:0:0:156:5591:-503.311,-46.9607,0	1/1:34:1,33:1:36:33:1181:-102.999,-6.63675,0	0/1:227:113,114:113:4008:114:4070:-298.151,0,-292.577	0/1:251:127,124:127:4541:124:4417:-322.142,0,-333.297	1/1:169:0,169:0:0:169:6029:-542.712,-50.8741,0	0/1:13:5,8:5:180:8:288:-22.354,0,-12.6387	1/1:25:0,25:0:0:25:871:-78.7055,-7.52575,0	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	1/1:18:0,18:0:0:18:633:-57.2951,-5.41854,0	0/1:205:101,104:101:3616:104:3723:-273.559,0,-263.935	1/1:171:0,171:0:0:171:6122:-551.078,-51.4761,0	0/1:41:26,15:26:928:15:540:-36.5943,0,-71.496	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:153:0,153:0:0:153:5473:-492.696,-46.0576,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:198:100,98:100:3592:98:3504:-255.966,0,-263.882	0/1:55:30,25:30:1068:25:896:-64.4037,0,-79.8754	0/1:61:21,40:21:752:40:1405:-108.379,0,-49.6434	0/1:141:65,76:65:2320:76:2724:-202.958,0,-166.615	0/1:157:60,97:60:2160:97:3484:-266.509,0,-147.405	1/1:181:2,179:2:72:179:6417:-570.773,-47.6497,0	1/1:146:0,146:0:0:146:5236:-471.372,-43.9504,0	0/1:129:64,65:64:2292:65:2339:-171.936,0,-167.709	0/1:181:104,77:104:3693:77:2768:-194.874,0,-278.087	0/1:12:10,2:10:356:2:72:-3.22436,0,-28.7689	1/1:125:0,125:0:0:125:4459:-401.481,-37.6288,0	1/1:58:0,58:0:0:58:2057:-185.4,-17.4597,0	0/1:19:12,7:12:432:7:252:-17.3094,0,-33.5016	0/1:166:75,91:75:2676:91:3255:-243.199,0,-191.115	1/1:62:0,62:0:0:62:2220:-200.064,-18.6639,0	0/1:25:8,17:8:284:17:612:-47.8877,0,-18.3776	0/1:14:10,4:10:360:4:129:-7.71324,0,-28.5299	0/1:112:52,60:52:1835:60:2137:-158.881,0,-131.715	1/1:100:2,98:2:72:98:3499:-308.283,-23.2663,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	1/1:211:0,211:0:0:211:7546:-679.179,-63.5173,0	1/1:192:1,191:1:36:191:6853:-613.237,-54.1995,0	1/1:70:0,70:0:0:70:2508:-225.972,-21.0721,0	1/1:86:0,86:0:0:86:3056:-275.269,-25.8886,0	1/1:223:3,220:3:108:220:7853:-696.721,-57.0545,0	1/1:180:1,178:1:36:178:6323:-565.564,-50.6459,0	1/1:39:0,39:0:0:39:1389:-125.307,-11.7402,0	1/1:70:0,70:0:0:70:2509:-226.062,-21.0721,0	1/1:51:0,51:0:0:51:1817:-163.809,-15.3525,0	0/1:34:14,20:14:500:20:720:-54.8938,0,-35.1012	1/1:122:0,122:0:0:122:4388:-395.091,-36.7257,0	0/1:94:58,36:58:2072:36:1288:-87.9268,0,-158.454	0/1:139:80,59:80:2865:59:2116:-148.866,0,-216.242	1/1:217:0,217:0:0:217:7724:-695.192,-65.3235,0	1/1:123:1,122:1:32:122:4376:-390.813,-33.8274,0	1/1:136:0,136:0:0:136:4873:-438.449,-40.9401,0	0/1:37:19,18:19:676:18:639:-46.7001,0,-50.0299	1/1:82:0,82:0:0:82:2948:-265.553,-24.6845,0	1/1:140:0,140:0:0:140:4977:-448.078,-42.1442,0	1/1:305:0,305:0:0:305:10948:-985.213,-91.8142,0	1/1:58:0,58:0:0:58:2046:-184.408,-17.4597,0	1/1:80:0,80:0:0:80:2868:-258.357,-24.0824,0	0/1:65:31,34:31:1112:34:1209:-89.548,0,-80.8244	1/1:160:2,158:2:72:158:5617:-498.818,-41.3281,0	0/1:28:15,13:15:536:13:451:-32.491,0,-40.146	1/1:102:0,102:0:0:102:3656:-329.244,-30.7051,0	1/1:96:0,96:0:0:96:3440:-309.813,-28.8989,0	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	0/1:97:42,55:42:1493:55:1969:-148.285,0,-105.463	0/1:92:62,30:62:2220:30:1080:-69.8185,0,-172.37	1/1:160:0,160:0:0:160:5723:-515.187,-48.1648,0	1/1:116:0,116:0:0:116:4164:-374.941,-34.9195,0
chr06	9122755	.	A	C	289067	PASS	AB=0.475596;ABP=34.0646;AC=145;AF=0.771277;AN=188;AO=10660;CIGAR=1X;DP=13843;DPB=13843;DPRA=0;EPP=205.087;EPPR=18.1942;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.9625;MQMR=59.9704;NS=94;NUMALT=1;ODDS=2.36262;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=377482;QR=112264;RO=3175;RPL=10610;RPP=22718.6;RPPR=6802.22;RPR=50;RUN=1;SAF=4784;SAP=245.919;SAR=5876;SRF=1502;SRP=23.009;SRR=1673;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:77:47,30:47:1668:30:1068:-73.2528,0,-127.228	1/1:231:1,230:1:32:230:8181:-733.106,-66.3386,0	0/1:272:129,143:129:4531:143:5066:-374.205,0,-326.083	1/1:208:0,208:0:0:208:7404:-666.347,-62.6142,0	0/1:114:67,47:67:2378:47:1646:-114.107,0,-179.96	0/1:90:56,34:56:1966:34:1205:-81.6612,0,-150.121	1/1:173:0,173:0:0:173:6169:-555.307,-52.0782,0	0/1:183:100,83:100:3531:83:2907:-206.759,0,-262.914	0/1:135:62,73:62:2199:73:2540:-188.209,0,-157.533	0/1:145:87,58:87:3069:58:2054:-141.481,0,-232.783	0/1:150:64,86:64:2291:86:3058:-230.294,0,-161.227	1/1:165:0,165:0:0:165:5887:-529.939,-49.67,0	0/1:189:100,89:100:3523:89:3118:-223.951,0,-260.387	0/1:136:78,58:78:2732:58:2052:-144.009,0,-205.184	1/1:165:0,165:0:0:165:5815:-523.464,-49.67,0	0/1:145:81,64:81:2848:64:2229:-157.222,0,-212.909	1/1:134:0,134:0:0:134:4780:-430.359,-40.338,0	1/1:134:1,132:1:36:132:4695:-419.117,-36.7714,0	1/1:113:0,113:0:0:113:3970:-357.492,-34.0164,0	1/1:293:0,293:0:0:293:10354:-931.786,-88.2018,0	0/1:200:89,111:89:3159:111:3937:-294.304,0,-224.33	1/1:68:0,68:0:0:68:2388:-215.174,-20.47,0	0/1:98:46,52:46:1605:52:1859:-138.088,0,-115.236	0/1:202:119,83:119:4230:83:2951:-205.016,0,-320.074	0/1:63:40,23:40:1411:23:811:-54.3451,0,-108.322	1/1:268:1,267:1:36:267:9476:-849.096,-77.0778,0	1/1:283:1,281:1:36:281:9986:-895.139,-81.5971,0	1/1:75:0,75:0:0:75:2667:-240.271,-22.5773,0	0/1:282:142,140:142:5046:140:4986:-363.999,0,-369.398	0/1:119:56,63:56:2000:63:2236:-165.679,0,-144.45	1/1:172:0,172:0:0:172:6102:-549.27,-51.7772,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:9:6,3:6:212:3:108:-7.3659,0,-16.7155	1/1:9:0,9:0:0:9:316:-28.7789,-2.70927,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:450:226,223:226:8022:223:7930:-578.206,0,-586.477	1/1:162:0,162:0:0:162:5719:-514.832,-48.7669,0	0/1:161:83,78:83:2934:78:2792:-203.055,0,-215.83	0/1:8:5,2:5:180:2:72:-4.36968,0,-14.085	1/1:194:1,193:1:27:193:6859:-614.683,-55.7,0	1/1:67:0,67:0:0:67:2367:-213.286,-20.169,0	0/1:223:105,118:105:3727:118:4176:-308.894,0,-268.504	0/1:204:107,97:107:3772:97:3398:-244.625,0,-278.269	0/1:141:70,71:70:2467:71:2525:-185.055,0,-179.84	0/1:102:67,35:67:2357:35:1221:-79.4862,0,-181.683	0/1:156:79,77:79:2782:77:2713:-197.449,0,-203.472	1/1:192:4,188:4:144:188:6661:-586.255,-44.4841,0	1/1:123:0,123:0:0:123:4312:-388.256,-37.0267,0	0/1:238:137,101:137:4858:101:3544:-247.522,0,-365.732	0/1:232:117,115:117:4139:115:4075:-297.098,0,-302.859	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:184:0,184:0:0:184:6463:-581.754,-55.3895,0	1/1:47:0,47:0:0:47:1645:-148.333,-14.1484,0	0/1:11:9,2:9:316:2:72:-3.52539,0,-25.4675	0/1:187:100,87:100:3572:87:3070:-220.235,0,-265.396	1/1:64:0,64:0:0:64:2266:-204.202,-19.2659,0	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:9:5,4:5:176:4:144:-10.6043,0,-13.4757	0/1:148:73,75:73:2563:75:2671:-196.082,0,-186.37	1/1:210:0,208:0:0:208:7396:-665.326,-62.6142,0	0/1:12:9,3:9:312:3:108:-6.46281,0,-24.803	1/1:191:0,191:0:0:191:6783:-610.542,-57.4967,0	1/1:211:3,207:3:99:207:7337:-651.134,-54.3321,0	1/1:112:1,111:1:36:111:3950:-352.094,-30.1171,0	1/1:123:0,123:0:0:123:4341:-390.867,-37.0267,0	1/1:241:2,239:2:72:239:8339:-743.69,-65.7115,0	1/1:158:3,155:3:104:155:5532:-488.304,-37.8599,0	1/1:56:0,56:0:0:56:1957:-176.401,-16.8577,0	1/1:156:0,156:0:0:156:5536:-498.366,-46.9607,0	1/1:176:0,176:0:0:176:6243:-561.968,-52.9813,0	0/1:25:12,13:12:420:13:468:-34.9339,0,-30.6083	1/1:84:0,84:0:0:84:2977:-268.158,-25.2865,0	0/1:127:58,69:58:2060:69:2395:-177.574,0,-147.441	0/1:264:128,136:128:4503:136:4830:-354.597,0,-325.933	1/1:153:2,151:2:68:151:5424:-481.83,-39.5999,0	1/1:184:0,184:0:0:184:6533:-587.423,-55.3895,0	1/1:147:1,146:1:36:146:5197:-464.202,-40.6531,0	0/1:19:11,8:11:392:8:288:-20.5478,0,-29.9005	1/1:176:0,176:0:0:176:6209:-558.893,-52.9813,0	1/1:148:0,148:0:0:148:5244:-472.097,-44.5524,0	1/1:256:2,254:2:72:254:9034:-806.206,-70.227,0	1/1:229:2,227:2:72:227:8055:-718.133,-62.0991,0	1/1:123:0,123:0:0:123:4385:-394.824,-37.0267,0	0/1:201:100,101:100:3508:101:3544:-258.663,0,-255.427	1/1:292:3,289:3:108:289:10227:-910.291,-77.8256,0	0/1:102:50,52:50:1766:52:1860:-136.975,0,-128.517	1/1:186:0,186:0:0:186:6530:-587.792,-55.9916,0	1/1:144:0,144:0:0:144:5065:-455.992,-43.3483,0	1/1:85:0,85:0:0:85:3009:-271.042,-25.5876,0	0/1:174:102,72:102:3628:72:2542:-176.652,0,-274.348	0/1:189:118,71:118:4181:71:2484:-166.916,0,-319.58	1/1:172:0,172:0:0:172:6125:-551.352,-51.7772,0	1/1:259:1,257:1:36:257:9059:-811.723,-74.4001,0
chr06	9122845	.	G	A	167488	PASS	AB=0.508386;ABP=5.92381;AC=143;AF=0.760638;AN=188;AO=6537;CIGAR=1X;DP=8892;DPB=8892;DPRA=0;EPP=3742.06;EPPR=2300.01;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9881;MQMR=59.9779;NS=94;NUMALT=1;ODDS=0.296009;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233600;QR=84012;RO=2354;RPL=6537;RPP=14197.9;RPPR=5114.66;RPR=0;RUN=1;SAF=1591;SAP=3742.06;SAR=4946;SRF=388;SRP=2300.01;SRR=1966;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:17:10,7:10:360:7:252:-17.9114,0,-27.6268	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	0/1:56:26,30:26:928:30:1052:-78.1321,0,-66.9806	1/1:57:0,57:0:0:57:2032:-183.153,-17.1587,0	0/1:29:16,13:16:557:13:464:-33.3676,0,-41.7257	0/1:25:13,12:13:460:12:432:-31.6954,0,-34.2096	1/1:45:1,43:1:36:43:1532:-134.646,-9.93196,0	0/1:45:22,23:22:788:23:820:-60.5762,0,-57.6984	0/1:44:19,25:19:680:25:878:-66.0901,0,-48.2838	0/1:30:18,12:18:624:12:419:-29.0118,0,-47.4533	0/1:438:215,223:215:7681:223:7976:-586.012,0,-559.446	1/1:124:0,124:0:0:124:4444:-400.13,-37.3277,0	0/1:101:40,61:40:1436:61:2192:-167.141,0,-99.1336	0/1:77:35,42:35:1251:42:1497:-111.843,0,-89.715	1/1:71:0,71:0:0:71:2538:-228.671,-21.3731,0	0/1:77:45,32:45:1600:32:1152:-80.8108,0,-121.111	1/1:93:0,93:0:0:93:3336:-300.457,-27.9958,0	1/1:75:0,75:0:0:75:2684:-241.805,-22.5773,0	1/1:166:0,166:0:0:166:5945:-535.156,-49.971,0	1/1:38:0,38:0:0:38:1356:-122.34,-11.4391,0	0/1:55:24,31:24:864:31:1112:-83.8347,0,-61.5259	1/1:10:0,10:0:0:10:348:-31.6551,-3.0103,0	0/1:38:16,22:16:576:22:788:-59.8057,0,-40.7358	0/1:47:22,25:22:788:25:873:-64.7361,0,-57.0964	0/1:13:7,6:7:248:6:212:-15.5114,0,-18.7508	1/1:61:0,61:0:0:61:2180:-196.466,-18.3628,0	1/1:59:0,59:0:0:59:2112:-190.321,-17.7608,0	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	0/1:48:31,17:31:1116:17:612:-40.964,0,-85.8111	0/1:24:12,12:12:420:12:428:-31.6341,0,-30.9093	1/1:31:0,31:0:0:31:1096:-98.9499,-9.33193,0	0/1:95:56,39:56:1985:39:1381:-95.9889,0,-150.325	1/1:165:0,165:0:0:165:5896:-530.747,-49.67,0	0/1:176:79,97:79:2817:97:3467:-259.261,0,-200.787	0/1:375:164,211:164:5872:211:7553:-566.922,0,-415.704	1/1:321:0,321:0:0:321:11439:-1029.39,-96.6306,0	0/1:175:93,82:93:3331:82:2929:-211.164,0,-247.327	1/1:25:0,25:0:0:25:884:-79.8784,-7.52575,0	0/1:275:142,133:142:5075:133:4772:-346.853,0,-374.111	0/1:137:65,72:65:2298:72:2584:-191.568,0,-165.837	1/1:45:0,45:0:0:45:1612:-145.369,-13.5464,0	1/1:160:0,160:0:0:160:5747:-517.343,-48.1648,0	0/1:38:10,28:10:356:28:1008:-79.5972,0,-20.9421	0/1:77:30,47:30:1076:47:1674:-127.767,0,-73.9735	0/1:79:44,35:44:1564:35:1247:-88.7519,0,-117.27	0/1:23:14,9:14:504:9:324:-22.5822,0,-38.7744	0/1:18:9,9:9:316:9:324:-24.0873,0,-23.3603	1/1:40:1,39:1:36:39:1367:-119.727,-8.44293,0	1/1:20:0,20:0:0:20:699:-63.2325,-6.0206,0	0/1:36:12,24:12:432:24:830:-64.1753,0,-28.3841	0/1:38:18,20:18:631:20:720:-53.6896,0,-45.6765	0/1:167:73,94:73:2624:94:3368:-253.063,0,-186.135	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	0/1:67:41,26:41:1456:26:921:-63.0362,0,-111.167	0/1:30:18,12:18:644:12:428:-29.8279,0,-49.2597	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:124:64,60:64:2292:60:2152:-156.619,0,-169.214	0/1:110:52,58:52:1872:58:2076:-153.997,0,-135.646	0/1:29:11,18:11:396:18:644:-49.5607,0,-27.2529	1/1:84:0,84:0:0:84:2993:-269.601,-25.2865,0	0/1:90:37,53:37:1320:53:1904:-144.545,0,-92.0092	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	1/1:41:3,38:3:108:38:1356:-112.265,-2.26706,0	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	1/1:30:0,30:0:0:30:1034:-93.365,-9.0309,0	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	1/1:36:0,36:0:0:36:1287:-116.133,-10.8371,0	1/1:568:1,567:1:36:567:20319:-1824.61,-167.387,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:90:0,90:0:0:90:3228:-290.742,-27.0927,0	0/1:142:73,69:73:2620:69:2473:-180.077,0,-193.301	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	0/1:30:15,15:15:532:15:540:-39.9056,0,-39.1822	0/1:50:24,26:24:852:26:890:-65.3509,0,-61.9489	1/1:38:0,38:0:0:38:1360:-122.701,-11.4391,0	1/1:41:0,41:0:0:41:1472:-132.748,-12.3422,0	1/1:33:0,33:0:0:33:1168:-105.427,-9.93399,0	0/1:196:98,98:98:3508:98:3500:-256.207,0,-256.928	1/1:28:1,27:1:36:27:955:-82.6666,-4.83057,0	1/1:42:0,42:0:0:42:1484:-133.855,-12.6433,0	1/1:69:0,69:0:0:69:2456:-221.295,-20.7711,0	1/1:88:0,88:0:0:88:3156:-284.265,-26.4906,0	1/1:83:1,82:1:36:82:2935:-260.785,-21.3872,0	0/1:94:48,46:48:1700:46:1640:-119.592,0,-124.986	1/1:137:0,137:0:0:137:4894:-440.612,-41.2411,0	0/1:25:15,10:15:527:10:356:-24.8555,0,-40.2344	1/1:88:0,88:0:0:88:3150:-283.725,-26.4906,0	1/1:86:0,86:0:0:86:3071:-276.618,-25.8886,0	1/1:575:0,575:0:0:575:20571:-1850.87,-173.092,0	0/1:824:409,415:409:14599:415:14872:-1090.16,0,-1065.6	0/1:86:60,26:60:2112:26:936:-58.6709,0,-164.459	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:130:1,129:1:36:129:4600:-410.566,-35.5356,0
chr06	9791087	.	A	T	285110	PASS	AB=0.481481;ABP=20.7842;AC=144;AF=0.765957;AN=188;AO=13097;CIGAR=1X;DP=16221;DPB=16221;DPRA=0;EPP=28234.7;EPPR=6678.4;GTI=4;LEN=1;MEANALT=1.07447;MQM=59.9897;MQMR=59.9981;NS=94;NUMALT=1;ODDS=0.83191;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=468072;QR=111599;RO=3114;RPL=24;RPP=28234.7;RPPR=6678.4;RPR=13073;RUN=1;SAF=0;SAP=28442.8;SAR=13097;SRF=0;SRP=6764.98;SRR=3114;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:46,35:46:1643:35:1243:-87.7904,0,-123.774	1/1:197:0,197:0:0:197:7048:-634.377,-59.3029,0	0/1:227:115,112:115:4096:112:4004:-292.216,0,-300.491	1/1:512:1,511:1:36:511:18255:-1638.67,-150.529,0	0/1:166:98,68:98:3511:68:2436:-169.524,0,-266.228	0/1:64:27,37:27:964:37:1328:-100.556,0,-67.8109	1/1:236:2,234:2:72:234:8383:-747.637,-64.2064,0	0/1:274:155,119:155:5547:119:4246:-299.838,0,-416.872	0/1:105:44,61:44:1576:61:2184:-165.218,0,-110.523	0/1:122:65,57:65:2327:57:2028:-146.067,0,-172.964	0/1:92:42,50:42:1512:50:1784:-133.148,0,-108.68	1/1:89:0,89:0:0:89:3174:-285.883,-26.7917,0	0/1:76:41,35:41:1461:35:1244:-89.3864,0,-108.906	0/1:90:52,38:52:1853:38:1360:-95.6079,0,-139.955	1/1:80:0,80:0:0:80:2848:-256.556,-24.0824,0	0/1:61:30,31:30:1080:31:1095:-80.4964,0,-79.1504	1/1:76:0,76:0:0:76:2715:-244.593,-22.8783,0	1/1:48:0,48:0:0:48:1712:-154.366,-14.4494,0	1/1:47:0,47:0:0:47:1684:-151.847,-14.1484,0	1/1:357:0,356:0:0:356:12747:-1146.69,-107.167,0	0/1:261:121,140:121:4335:140:5024:-373.736,0,-311.756	1/1:229:0,229:0:0:229:8178:-736.036,-68.9359,0	0/1:145:82,63:82:2940:63:2250:-159.114,0,-221.185	0/1:226:120,106:120:4312:106:3800:-274.165,0,-320.222	0/1:117:53,64:53:1896:64:2287:-170.871,0,-135.698	1/1:630:1,629:1:36:629:22447:-2016.05,-186.051,0	1/1:406:0,406:0:0:406:14501:-1304.84,-122.218,0	1/1:52:0,52:0:0:52:1872:-168.759,-15.6536,0	0/1:639:315,324:315:11289:324:11628:-854.026,0,-823.531	0/1:257:131,126:131:4685:126:4489:-326.815,0,-344.445	1/1:601:0,601:0:0:601:21513:-1935.62,-180.919,0	0/1:7:6,1:6:212:1:36:-1.49107,0,-17.3176	1/1:13:1,12:1:36:12:428:-35.2605,-0.315115,0	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/1:281:154,127:154:5502:127:4555:-325.525,0,-410.714	1/1:390:1,389:1:36:389:13923:-1249.24,-113.803,0	1/1:93:0,93:0:0:93:3340:-300.816,-27.9958,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	1/1:287:1,286:1:36:286:10205:-914.781,-82.7973,0	1/1:46:0,46:0:0:46:1656:-149.328,-13.8474,0	0/1:262:121,141:121:4348:141:5033:-374.247,0,-312.623	0/1:85:41,44:41:1476:44:1584:-117.264,0,-107.549	0/1:83:41,42:41:1454:42:1490:-109.408,0,-106.169	0/1:159:75,84:75:2700:84:2998:-222.175,0,-195.38	0/1:246:130,116:130:4672:116:4136:-298.368,0,-346.586	1/1:344:2,342:2:72:342:12193:-1090.38,-96.7176,0	1/1:211:0,211:0:0:211:7497:-674.771,-63.5173,0	0/1:290:153,137:153:5500:137:4893:-353.222,0,-407.82	0/1:253:141,112:141:5046:112:4012:-285.108,0,-378.124	0/1:20:5,15:5:180:15:536:-42.5542,0,-10.5315	1/1:202:0,202:0:0:202:7213:-649.226,-60.8081,0	1/1:41:1,40:1:36:40:1431:-125.489,-8.74396,0	0/1:17:13,4:13:468:4:144:-8.19611,0,-37.3421	0/1:234:132,100:132:4727:100:3570:-251.31,0,-355.389	1/1:95:0,94:0:0:94:3372:-303.336,-28.2968,0	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:23:20,3:20:720:3:108:-3.15148,0,-58.2051	0/1:182:104,78:104:3728:78:2798:-197.272,0,-280.933	1/1:159:0,158:0:0:158:5655:-508.71,-47.5627,0	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:429:0,429:0:0:429:15317:-1378.24,-129.142,0	1/1:430:8,422:8:288:422:15058:-1328.68,-103.175,0	1/1:156:0,156:0:0:156:5572:-501.605,-46.9607,0	1/1:201:0,201:0:0:201:7148:-643.38,-60.507,0	1/1:264:1,263:1:36:263:9402:-842.545,-75.8736,0	1/1:211:2,209:2:72:209:7450:-663.712,-56.6806,0	1/1:37:0,37:0:0:37:1317:-118.813,-11.1381,0	1/1:154:0,154:0:0:154:5513:-496.296,-46.3586,0	1/1:103:0,103:0:0:103:3704:-333.56,-31.0061,0	0/1:25:12,13:12:428:13:460:-34.2096,0,-31.3331	1/1:197:0,197:0:0:197:7036:-633.304,-59.3029,0	0/1:120:53,67:53:1904:67:2399:-180.043,0,-135.514	0/1:270:141,129:141:5051:129:4618:-334.506,0,-373.456	1/1:385:0,385:0:0:385:13779:-1239.89,-115.897,0	1/1:196:0,196:0:0:196:7005:-630.512,-59.0019,0	1/1:200:0,200:0:0:200:7162:-644.635,-60.206,0	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	1/1:181:0,181:0:0:181:6476:-582.926,-54.4864,0	1/1:172:0,172:0:0:172:6171:-555.486,-51.7772,0	1/1:434:1,429:1:36:429:15354:-1377.97,-126.204,0	1/1:136:0,136:0:0:136:4817:-433.685,-40.9401,0	1/1:85:0,85:0:0:85:3041:-273.92,-25.5876,0	0/1:105:59,45:59:2120:45:1596:-112.262,0,-159.402	1/1:191:0,191:0:0:191:6831:-614.861,-57.4967,0	0/1:60:31,29:31:1116:29:1044:-76.213,0,-82.6899	1/1:104:0,104:0:0:104:3708:-333.921,-31.3071,0	1/1:100:0,100:0:0:100:3571:-321.598,-30.103,0	1/1:61:1,60:1:36:60:2139:-189.179,-14.7646,0	0/1:139:63,76:63:2268:76:2709:-202.209,0,-162.539	0/1:62:37,25:37:1332:25:892:-61.9358,0,-101.519	1/1:241:0,241:0:0:241:8582:-772.38,-72.5482,0	1/1:125:0,125:0:0:125:4484:-403.728,-37.6288,0
chr06	9855455	.	G	C	30953.6	PASS	AB=0.521528;ABP=17.1283;AC=44;AF=0.234043;AN=188;AO=1838;CIGAR=1X;DP=9580;DPB=9580;DPRA=0.786087;EPP=3994.18;EPPR=16740.7;GTI=0;LEN=1;MEANALT=1.14;MQM=59.9956;MQMR=59.9891;NS=94;NUMALT=1;ODDS=4.85616;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65644;QR=276523;RO=7728;RPL=0;RPP=3994.18;RPPR=16740.7;RPR=1838;RUN=1;SAF=1838;SAP=3994.18;SAR=0;SRF=7728;SRP=16784.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:17,21:17:612:21:748:-56.2062,0,-43.9743	0/0:141:141,0:141:5041:0:0:0,-42.4452,-453.835	0/1:88:37,51:37:1332:51:1820:-137.591,0,-93.6917	0/0:259:259,0:259:9219:0:0:0,-77.9668,-829.682	0/1:110:50,60:50:1773:60:2151:-160.743,0,-126.738	0/1:63:43,20:43:1536:20:703:-44.6286,0,-119.568	0/0:162:162,0:162:5812:0:0:0,-48.7669,-523.192	0/1:167:63,104:63:2256:104:3724:-285.08,0,-153.031	0/1:82:36,46:36:1292:46:1632:-122.484,0,-91.8993	0/1:101:43,57:43:1548:57:2040:-153.409,0,-109.064	0/1:33:19,14:19:684:14:504:-35.7641,0,-51.9563	0/0:63:62,1:62:2228:1:36:0,-15.3666,-197.186	0/1:51:29,22:29:1044:22:788:-55.8923,0,-78.9223	0/1:63:27,36:27:964:36:1292:-97.6189,0,-68.1119	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/1:43:13,30:13:464:30:1072:-83.8482,0,-29.1532	0/0:45:45,0:45:1611:0:0:0,-13.5463,-145.279	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/0:290:290,0:290:10344:0:0:0,-87.2987,-930.881	0/1:151:71,80:71:2518:80:2868:-212.901,0,-181.414	0/0:197:197,0:197:7031:0:0:0,-59.3029,-632.849	0/1:52:27,25:27:968:25:896:-65.3068,0,-71.7838	0/1:105:50,55:50:1792:55:1940:-143.266,0,-129.954	0/1:86:36,50:36:1292:50:1778:-134.413,0,-90.6952	0/0:368:365,1:365:13088:1:36:0,-106.922,-1174.16	0/0:202:201,0:201:7157:0:0:0,-60.507,-643.825	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:275:168,107:168:6017:107:3817:-260.943,0,-458.849	0/1:226:112,114:112:3997:114:4064:-297.916,0,-291.886	0/0:176:174,1:174:6191:1:36:0,-49.4418,-553.688	0/1:20:13,7:13:460:7:244:-16.2788,0,-35.7148	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:11:6,5:6:216:5:176:-12.8737,0,-16.4792	0/1:9:2,7:2:68:7:248:-19.9549,0,-3.74844	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/1:133:62,71:62:2209:71:2548:-189.533,0,-159.036	0/0:280:280,0:280:10021:0:0:0,-84.2884,-901.825	0/0:60:59,0:59:2112:0:0:0,-17.7608,-189.989	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:158:158,0:158:5645:0:0:0,-47.5627,-508.17	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/1:160:90,70:90:3236:70:2495:-176.638,0,-243.166	0/1:45:22,23:22:788:23:824:-60.937,0,-57.6984	0/1:32:13,19:13:464:19:680:-51.8962,0,-32.4645	0/1:63:36,27:36:1296:27:960:-67.7514,0,-97.979	0/1:121:61,59:61:2184:59:2120:-154.624,0,-160.382	0/0:253:250,3:250:8960:3:108:0,-66.0854,-796.304	0/0:134:134,0:134:4795:0:0:0,-40.338,-431.706	0/1:125:63,61:63:2264:61:2192:-159.858,0,-166.335	0/1:201:77,124:77:2768:124:4420:-337.467,0,-188.854	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	0/0:160:159,0:159:5708:0:0:0,-47.8638,-513.476	0/0:75:75,0:75:2677:0:0:0,-22.5772,-241.174	0/1:56:19,37:19:684:37:1324:-102.604,0,-45.0326	0/1:110:56,54:56:2008:54:1928:-140.683,0,-147.88	0/0:47:47,0:47:1668:0:0:0,-14.1484,-150.407	0/1:19:6,13:6:216:13:468:-36.7401,0,-14.0709	0/1:33:15,18:15:536:18:648:-48.7179,0,-38.6408	0/1:81:34,47:34:1220:47:1680:-127.104,0,-85.7234	0/0:86:84,2:84:3008:2:72:0,-19.0519,-264.115	0/1:13:6,7:6:216:7:248:-18.7508,0,-15.8771	0/0:268:268,0:268:9606:0:0:0,-80.676,-864.488	0/0:196:196,0:196:7025:0:0:0,-59.0019,-631.609	0/0:82:80,0:80:2834:0:0:0,-24.0824,-255.01	0/0:95:95,0:95:3385:0:0:0,-28.5978,-304.865	0/0:146:146,0:146:5232:0:0:0,-43.9504,-471.017	0/0:125:125,0:125:4496:0:0:0,-37.6287,-404.806	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:79:79,0:79:2827:0:0:0,-23.7814,-254.668	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.634	0/1:47:25,22:25:900:22:779:-56.2837,0,-67.1726	0/0:149:149,0:149:5296:0:0:0,-44.8535,-476.772	0/1:48:24,24:24:860:24:864:-63.6331,0,-63.2724	0/1:201:82,118:82:2921:118:4229:-320.222,0,-202.558	0/0:187:187,0:187:6716:0:0:0,-56.2926,-604.512	0/0:181:181,0:181:6469:0:0:0,-54.4864,-582.295	0/0:144:144,0:144:5172:0:0:0,-43.3483,-465.618	0/1:25:17,8:17:608:8:288:-18.7417,0,-47.5263	0/0:152:152,0:152:5459:0:0:0,-45.7566,-491.435	0/0:109:109,0:109:3912:0:0:0,-32.8123,-352.272	0/0:228:228,0:228:8159:0:0:0,-68.6348,-734.324	0/0:72:72,0:72:2556:0:0:0,-21.6742,-230.27	0/0:38:38,0:38:1349:0:0:0,-11.4391,-121.708	0/1:42:17,25:17:608:25:892:-67.9564,0,-42.4088	0/0:67:66,1:66:2376:1:27:0,-17.4692,-211.398	0/1:32:14,18:14:504:18:648:-49.0189,0,-36.0651	0/0:50:49,0:49:1752:0:0:0,-14.7505,-157.604	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:81:41,40:41:1459:40:1409:-102.722,0,-107.222	0/1:45:22,23:22:784:23:820:-60.5762,0,-57.3376	0/0:116:115,0:115:4124:0:0:0,-34.6184,-370.984	0/0:57:57,0:57:2052:0:0:0,-17.1587,-184.951
chr06	9855578	.	TCCA	TTG,TATG	170393	PASS	AB=0.47057,0.523883;ABP=27.4225,19.0872;AC=144,44;AF=0.765957,0.234043;AN=188;AO=6199,1708;CIGAR=1M1D2X,1M3X;DP=7938;DPB=6382.75;DPRA=0,0.886221;EPP=13464,3711.89;EPPR=0;GTI=0;LEN=3,3;MEANALT=1.85106,2.34615;MQM=55.9652,59.291;MQMR=0;NS=94;NUMALT=2;ODDS=2.50993;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=220156,60593;QR=0;RO=0;RPL=0,0;RPP=13464,3711.89;RPPR=0;RPR=6199,1708;RUN=1,1;SAF=0,0;SAP=13464,3711.89;SAR=6199,1708;SRF=0;SRP=0;SRR=0;TYPE=complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:55:0,27,28:0:0:27,28:963,970:-157.385,-79.1062,-70.9784,-78.63,0,-70.2011	1/1:104:0,104,0:0:0:104,0:3703,0:-332.601,-31.3071,0,-332.601,-31.3071,-332.601	1/2:196:0,91,103:0:0:91,103:3255,3645:-561.469,-296.836,-269.442,-264.75,0,-233.744	1/1:160:0,160,0:0:0:160,0:5639,0:-506.931,-48.1648,0,-506.931,-48.1648,-506.931	1/2:78:0,39,39:0:0:39,39:1381,1381:-224.945,-112.847,-101.107,-112.451,0,-100.711	1/2:92:0,49,43:0:0:49,43:1736,1530:-265.816,-124.941,-110.191,-141.229,0,-128.285	1/1:130:0,130,0:0:0:130,0:4616,0:-415.425,-39.1339,0,-415.425,-39.1339,-415.425	1/2:120:0,46,74:0:0:46,74:1648,2649:-350.345,-216.285,-202.438,-134.417,0,-112.141	1/2:88:0,42,44:0:0:42,44:1504,1570:-250.327,-128.058,-115.414,-122.337,0,-109.091	1/2:105:0,64,41:0:0:64,41:2282,1430:-301.469,-116.628,-97.3616,-185.193,0,-172.85	1/2:53:0,20,31:0:0:20,31:716,1090:-147.011,-88.6915,-82.6709,-58.3239,0,-48.992	1/1:60:0,60,0:0:0:60,0:2127,0:-191.219,-18.0618,0,-191.219,-18.0618,-191.219	1/2:53:0,25,28:0:0:25,28:882,990:-152.488,-80.9133,-73.3876,-71.9265,0,-63.4977	1/2:44:0,24,20:0:0:24,20:845,711:-127.007,-58.2735,-51.0488,-69.0871,0,-63.0665	1/1:56:0,56,0:0:0:56,0:2006,0:-180.723,-16.8577,0,-180.723,-16.8577,-180.723	1/2:33:0,15,18:0:0:15,18:536,641:-96.2446,-52.6011,-48.0856,-43.9998,0,-38.5813	1/1:60:0,60,0:0:0:60,0:2138,0:-192.138,-18.0618,0,-192.138,-18.0618,-192.138	1/1:38:0,38,0:0:0:38,0:1340,0:-120.589,-11.4391,0,-120.589,-11.4391,-120.589	1/1:40:0,40,0:0:0:40,0:1427,0:-128.535,-12.0412,0,-128.535,-12.0412,-128.535	1/1:113:0,112,1:0:0:112,1:3981,36:-357.11,-33.7154,0,-354.172,-30.4181,-353.871	1/2:146:0,65,80:0:0:65,80:2318,2823:-418.173,-229.886,-210.319,-188.402,0,-164.319	1/1:146:0,142,0:0:0:142,0:5052,0:-454.343,-42.7463,0,-454.343,-42.7463,-454.343	1/2:58:0,36,22:0:0:36,22:1278,784:-168.219,-64.2529,-53.4158,-104.321,0,-97.6986	1/2:115:0,55,58:0:0:55,58:1963,2080:-329.517,-169.7,-153.143,-159.886,0,-142.427	1/2:82:0,37,45:0:0:37,45:1291,1586:-234.375,-129.456,-118.317,-105.269,0,-91.7229	1/1:220:0,219,0:0:0:219,0:7765,0:-697.778,-65.9256,0,-697.778,-65.9256,-697.778	1/1:188:0,188,0:0:0:188,0:6666,0:-598.805,-56.5936,0,-598.805,-56.5936,-598.805	1/1:27:0,27,0:0:0:27,0:966,0:-87.1516,-8.12781,0,-87.1516,-8.12781,-87.1516	1/2:264:0,130,133:0:0:130,133:4638,4707:-760.264,-383.15,-344.016,-377.109,0,-337.072	1/2:139:0,64,74:0:0:64,74:2280,2622:-399.095,-213.446,-194.18,-185.645,0,-163.369	1/1:153:0,153,0:0:0:153,0:5452,0:-490.122,-46.0576,0,-490.122,-46.0576,-490.122	1/2:10:0,2,8:0:0:2,8:72,280:-29.0026,-23.1305,-22.5284,-6.22973,0,-3.82149	1/1:19:0,19,0:0:0:19,0:676,0:-61.0425,-5.71957,0,-61.0425,-5.71957,-61.0425	1/2:12:0,8,4:0:0:8,4:277,136:-33.5972,-11.2387,-8.83047,-22.6974,0,-21.4932	1/2:21:0,10,11:0:0:10,11:358,394:-61.6404,-32.4902,-29.4799,-29.5079,0,-26.1965	1/1:17:0,17,0:0:0:17,0:593,0:-53.6241,-5.11751,0,-53.6241,-5.11751,-53.6241	1/2:134:0,64,68:0:0:64,68:2288,2431:-384.579,-198.199,-178.934,-186.377,0,-165.907	1/1:170:0,169,0:0:0:169,0:6013,0:-539.695,-50.8741,0,-539.695,-50.8741,-539.695	1/1:56:0,56,0:0:0:56,0:1984,0:-178.406,-16.8577,0,-178.406,-16.8577,-178.406	1/2:4:0,2,2:0:0:2,2:70,72:-11.9212,-6.23466,-5.6326,-6.04124,0,-5.43918	1/1:168:0,167,0:0:0:167,0:5967,0:-535.683,-50.272,0,-535.683,-50.272,-535.683	1/1:31:0,31,0:0:0:31,0:1109,0:-99.9671,-9.33193,0,-99.9671,-9.33193,-99.9671	1/2:149:0,68,81:0:0:68,81:2430,2881:-432.777,-234.992,-214.522,-198.141,0,-173.758	1/2:40:0,18,22:0:0:18,22:626,792:-115.842,-64.9665,-59.5479,-51.2289,0,-44.6062	1/2:27:0,10,17:0:0:10,17:360,595:-78.0594,-48.7459,-45.7356,-29.6692,0,-24.5517	1/2:111:0,38,72:0:0:38,72:1347,2540:-316.47,-206.772,-195.333,-109.692,0,-88.0183	1/2:109:0,52,56:0:0:52,56:1834,1971:-309.283,-160.325,-144.671,-148.952,0,-132.095	1/1:134:0,133,0:0:0:133,0:4746,0:-425.183,-40.037,0,-425.183,-40.037,-425.183	1/1:126:0,126,0:0:0:126,0:4514,0:-405.694,-37.9298,0,-405.694,-37.9298,-405.694	1/2:115:0,55,59:0:0:55,59:1969,2108:-331.869,-171.404,-154.847,-160.481,0,-142.721	1/2:146:0,75,70:0:0:75,70:2674,2495:-421.285,-203.384,-180.807,-217.917,0,-196.844	1/2:10:0,4,6:0:0:4,6:139,216:-29.277,-17.9843,-16.7802,-11.645,0,-9.83882	1/1:121:0,121,0:0:0:121,0:4282,0:-384.795,-36.4246,0,-384.795,-36.4246,-384.795	1/1:24:0,24,0:0:0:24,0:849,0:-76.5978,-7.22472,0,-76.5978,-7.22472,-76.5978	1/2:17:0,11,6:0:0:11,6:392,213:-49.3506,-17.7097,-14.3984,-31.9951,0,-30.1889	1/2:85:0,38,47:0:0:38,47:1360,1675:-247.496,-136.869,-125.43,-110.983,0,-96.8347	1/1:75:0,74,1:0:0:74,1: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chr06	10675079	.	A	C	102045	PASS	AB=0.519036;ABP=30.2915;AC=44;AF=0.234043;AN=188;AO=4540;CIGAR=1X;DP=22250;DPB=22250;DPRA=0.970914;EPP=9861.5;EPPR=38390.3;GTI=2;LEN=1;MEANALT=1.10345;MQM=55.9577;MQMR=58.2836;NS=94;NUMALT=1;ODDS=2.31243;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161247;QR=624733;RO=17694;RPL=2758;RPP=458.625;RPPR=2954.42;RPR=1782;RUN=1;SAF=2758;SAP=458.625;SAR=1782;SRF=11303;SRP=2964.06;SRR=6391;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:23,17:23:808:17:612:-43.3722,0,-60.9989	0/0:229:229,0:229:8106:0:0:0,-68.9359,-729.569	0/1:190:80,110:80:2815:110:3904:-294.356,0,-196.396	0/0:554:554,0:554:19545:0:0:0,-166.771,-1755.43	0/1:90:27,63:27:956:63:2264:-176.45,0,-59.211	0/1:32:14,18:14:484:18:648:-49.0189,0,-34.2556	0/0:341:338,0:338:11889:0:0:0,-101.748,-1068.68	0/1:276:113,163:113:3961:163:5842:-442.807,0,-273.604	0/1:138:79,59:79:2778:59:2112:-148.807,0,-208.721	0/1:336:177,159:177:6248:159:5632:-403.622,0,-460.866	0/1:132:64,68:64:2255:68:2414:-176.959,0,-162.888	0/0:91:91,0:91:3163:0:0:0,-27.3937,-284.899	0/1:100:59,41:59:2083:41:1468:-102.313,0,-157.637	0/1:173:89,84:89:3117:84:2999:-216.903,0,-228.558	0/0:185:184,0:184:6542:0:0:0,-55.3895,-587.833	0/1:153:78,75:78:2763:75:2677:-194.069,0,-201.899	0/0:107:107,0:107:3772:0:0:0,-32.2102,-339.682	0/0:84:84,0:84:2939:0:0:0,-25.2865,-264.748	0/0:63:63,0:63:2232:0:0:0,-18.9649,-201.145	0/0:905:905,0:905:32171:0:0:0,-272.432,-2892.3	0/1:539:255,284:255:9080:284:10077:-741.585,0,-653.52	0/0:215:213,2:213:7530:2:72:0,-57.8847,-670.512	0/1:219:104,115:104:3716:115:4065:-298.433,0,-268.549	0/1:349:169,180:169:5903:180:6379:-468.132,0,-424.552	0/1:264:128,136:128:4534:136:4829:-353.732,0,-327.091	0/0:958:957,1:957:33843:1:36:0,-284.788,-3039.09	0/0:727:727,0:727:25764:0:0:0,-218.849,-2314.9	0/0:99:99,0:99:3481:0:0:0,-29.802,-313.121	0/1:858:428,429:428:15142:429:15234:-1108.41,0,-1102.89	0/1:337:188,149:188:6692:149:5265:-370.561,0,-500.348	0/0:262:260,2:260:9122:2:72:0,-72.0331,-813.796	0/1:21:11,10:11:396:10:360:-26.369,0,-29.6286	0/0:33:33,0:33:1160:0:0:0,-9.93399,-104.518	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:10:3,7:3:108:7:252:-20.0187,0,-7.06487	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:520:243,277:243:8615:277:9851:-726.758,0,-617.981	0/0:388:388,0:388:13676:0:0:0,-116.8,-1229.15	0/0:88:88,0:88:3077:0:0:0,-26.4906,-277.159	0/1:10:8,2:8:284:2:72:-3.81522,0,-22.8837	0/0:380:380,0:380:13544:0:0:0,-114.391,-1217.49	0/0:94:94,0:94:3324:0:0:0,-28.2968,-299.186	0/1:244:117,126:117:4164:126:4520:-330.296,0,-300.563	0/1:219:105,114:105:3714:114:4061:-299.355,0,-268.142	0/1:169:87,82:87:3070:82:2914:-210.578,0,-225.493	0/1:257:112,145:112:3902:145:5112:-380.94,0,-273.432	0/1:253:127,123:127:4463:123:4349:-315.966,0,-326.142	0/0:480:479,0:479:16900:0:0:0,-144.193,-1519.5	0/0:291:291,0:291:10248:0:0:0,-87.5997,-921.936	0/1:375:174,200:174:6136:200:7109:-525.976,0,-438.046	0/1:301:135,166:135:4742:166:5836:-431.729,0,-336.134	0/1:26:9,17:9:324:17:595:-45.9516,0,-21.5802	0/0:215:215,0:215:7570:0:0:0,-64.7214,-681.351	0/0:129:128,1:128:4569:1:36:0,-35.2346,-407.484	0/1:28:11,17:11:392:17:608:-46.6232,0,-27.1912	0/1:331:144,187:144:5085:187:6629:-495.243,0,-357.539	0/0:164:164,0:164:5783:0:0:0,-49.3689,-519.457	0/1:16:7,9:7:248:9:324:-24.6538,0,-17.8477	0/1:28:15,13:15:528:13:455:-32.8177,0,-39.4152	0/1:238:120,118:120:4249:118:4203:-305.568,0,-309.747	0/0:259:259,0:259:9170:0:0:0,-77.9668,-824.672	0/1:14:9,5:9:316:5:176:-11.9426,0,-24.5574	0/0:524:523,0:523:18348:0:0:0,-157.439,-1650.1	0/0:511:499,10:499:17573:10:351:0,-121.661,-1548.29	0/0:219:218,0:218:7739:0:0:0,-65.6245,-695.718	0/0:188:188,0:188:6627:0:0:0,-56.5936,-595.486	0/0:528:518,9:518:18291:9:320:0,-129.907,-1614.7	0/0:303:299,4:299:10610:4:144:0,-77.9375,-940.453	0/0:53:53,0:53:1884:0:0:0,-15.9546,-169.643	0/0:102:101,1:101:3534:1:32:0,-27.5057,-315.073	0/0:165:165,0:165:5840:0:0:0,-49.6699,-525.556	0/1:68:32,36:32:1140:36:1277:-94.6327,0,-82.4134	0/0:147:147,0:147:5126:0:0:0,-44.2514,-461.492	0/1:104:59,45:59:2065:45:1605:-113.432,0,-154.813	0/1:517:251,266:251:8846:266:9461:-694.484,0,-639.868	0/0:494:494,0:494:17396:0:0:0,-148.709,-1564.6	0/0:97:94,3:94:3344:3:108:0,-19.1247,-291.104	0/0:220:218,2:218:7658:2:72:0,-59.3899,-682.436	0/1:23:12,11:12:420:11:396:-29.0591,0,-31.2103	0/0:323:322,1:322:11396:1:36:0,-93.6344,-1021.04	0/0:190:190,0:190:6663:0:0:0,-57.1957,-599.758	0/0:611:609,2:609:21413:2:72:0,-177.093,-1918.72	0/0:185:185,0:185:6533:0:0:0,-55.6905,-587.437	0/0:207:207,0:207:7300:0:0:0,-62.3132,-656.742	0/1:201:109,92:109:3793:92:3278:-234.502,0,-281.018	0/0:379:377,2:377:13373:2:68:0,-107.652,-1196.03	0/1:35:20,15:20:708:15:536:-38.0388,0,-53.5095	0/0:110:110,0:110:3817:0:0:0,-33.1133,-343.734	0/0:75:75,0:75:2605:0:0:0,-22.5772,-234.698	0/0:97:97,0:97:3440:0:0:0,-29.1999,-309.558	0/1:208:96,112:96:3383:112:3967:-293.446,0,-241.636	0/1:220:69,151:69:2456:151:5317:-410.776,0,-154.918	0/0:232:232,0:232:8199:0:0:0,-69.839,-737.532	0/0:267:266,1:266:9410:1:36:0,-76.792,-842.327
chr06	11178838	.	GAT	GT	35549.3	PASS	AB=0.484721;ABP=9.77842;AC=43;AF=0.228723;AN=188;AO=1633;CIGAR=1M1D1M;DP=8827;DPB=8282;DPRA=0.935462;EPP=75.2008;EPPR=67.0231;GTI=1;LEN=1;MEANALT=1.15385;MQM=56.8316;MQMR=59.9238;NS=94;NUMALT=1;ODDS=3.3083;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57707;QR=253889;RO=7178;RPL=933;RPP=75.2008;RPPR=67.0231;RPR=700;RUN=1;SAF=0;SAP=3549.02;SAR=1633;SRF=2;SRP=15572.5;SRR=7176;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:35,18:35:1233:18:635:-41.4597,0,-95.3168	0/0:102:101,0:101:3586:0:0:0,-30.404,-322.749	0/1:161:84,76:84:2938:76:2701:-194.625,0,-216.213	0/0:218:217,1:217:7649:1:36:0,-62.03,-684.862	0/1:78:41,37:41:1448:37:1320:-95.5053,0,-107.127	0/1:70:37,33:37:1305:33:1160:-83.479,0,-96.6766	0/0:91:91,0:91:3212:0:0:0,-27.3937,-289.304	0/1:139:72,67:72:2517:67:2375:-171.513,0,-184.867	0/1:92:53,39:53:1871:39:1375:-96.1393,0,-140.973	0/1:75:32,43:32:1135:43:1523:-114.74,0,-79.8802	0/1:65:30,35:30:1069:35:1243:-92.4714,0,-76.9557	0/0:102:101,0:101:3554:0:0:0,-30.404,-319.789	0/1:67:37,30:37:1310:30:1071:-76.1863,0,-98.0317	0/1:32:19,13:19:679:13:456:-31.7129,0,-51.8058	0/0:53:53,0:53:1882:0:0:0,-15.9546,-169.658	0/1:55:20,35:20:710:35:1221:-93.3251,0,-47.669	0/0:27:27,0:27:970:0:0:0,-8.12781,-87.6177	0/0:29:29,0:29:1028:0:0:0,-8.72987,-92.8308	0/0:36:36,0:36:1268:0:0:0,-10.8371,-114.421	0/0:257:257,0:257:9138:0:0:0,-77.3647,-822.398	0/1:117:51,65:51:1789:65:2311:-172.539,0,-126.012	0/0:111:111,0:111:3933:0:0:0,-33.4143,-354.164	0/1:110:58,52:58:2054:52:1864:-134.621,0,-152.018	0/1:54:23,31:23:817:31:1079:-81.1274,0,-57.5957	0/1:127:65,62:65:2307:62:2196:-159.331,0,-169.659	0/0:281:281,0:281:9958:0:0:0,-84.5894,-895.496	0/0:209:209,0:209:7421:0:0:0,-62.9153,-667.941	0/0:26:26,0:26:919:0:0:0,-7.82678,-83.0261	0/1:224:128,96:128:4545:96:3385:-237.322,0,-341.787	0/1:164:73,91:73:2588:91:3220:-240.17,0,-183.797	0/0:96:96,0:96:3380:0:0:0,-28.8989,-304.417	0/1:7:3,4:3:108:4:144:-11.1811,0,-7.96796	0/0:14:14,0:14:493:0:0:0,-4.21442,-44.7023	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.9574	0/1:10:6,4:6:216:4:144:-10.2597,0,-16.7802	0/0:16:15,0:15:529:0:0:0,-4.51545,-47.7223	0/1:158:81,76:81:2889:76:2694:-195.109,0,-212.366	0/0:67:67,0:67:2373:0:0:0,-20.169,-213.828	0/0:52:52,0:52:1839:0:0:0,-15.6536,-165.788	0/1:4:2,2:2:72:2:57:-4.20247,0,-5.6326	0/0:233:232,1:232:8187:1:36:0,-66.5417,-733.254	0/0:35:35,0:35:1240:0:0:0,-10.536,-111.904	0/1:148:91,57:91:3134:57:2028:-138.124,0,-237.732	0/1:43:27,16:27:970:16:568:-38.4833,0,-74.6735	0/1:42:18,24:18:629:24:860:-64.3457,0,-44.2913	0/1:68:39,28:39:1370:28:977:-67.7043,0,-103.067	0/1:117:64,53:64:2252:53:1874:-133.504,0,-167.721	0/0:156:155,0:155:5452:0:0:0,-46.6596,-490.452	0/0:78:78,0:78:2763:0:0:0,-23.4803,-248.913	0/1:145:80,65:80:2816:65:2293:-162.782,0,-209.901	0/1:112:56,56:56:1983:56:1976:-144.358,0,-144.958	0/1:20:8,12:8:269:12:428:-32.8214,0,-18.5111	0/0:238:238,0:238:8446:0:0:0,-71.6451,-760.14	0/0:78:76,0:76:2692:0:0:0,-22.8783,-242.167	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:157:85,72:85:2995:72:2559:-183.017,0,-222.522	0/0:35:34,1:34:1207:1:36:0,-6.93777,-105.338	0/1:12:5,7:5:165:7:237:-18.042,0,-11.5612	0/1:10:2,8:2:72:8:280:-22.5221,0,-3.82642	0/1:86:48,37:48:1710:37:1302:-91.2596,0,-128.233	0/0:72:72,0:72:2547:0:0:0,-21.6742,-229.374	0/1:4:1,3:1:36:3:108:-8.86261,0,-2.39415	0/0:233:233,0:233:8244:0:0:0,-70.14,-741.98	0/0:183:179,4:179:6344:4:140:0,-42.1508,-558.12	0/0:92:92,0:92:3271:0:0:0,-27.6948,-294.61	0/0:91:91,0:91:3225:0:0:0,-27.3937,-290.471	0/0:136:135,1:135:4775:1:36:0,-37.3418,-426.312	0/0:152:148,4:148:5243:4:144:0,-32.4464,-458.701	0/0:40:40,0:40:1422:0:0:0,-12.0412,-128.276	0/0:68:68,0:68:2403:0:0:0,-20.47,-216.298	0/0:40:40,0:40:1429:0:0:0,-12.0412,-128.906	0/1:28:12,16:12:432:16:550:-41.3773,0,-30.7924	0/0:127:127,0:127:4448:0:0:0,-38.2308,-400.492	0/1:117:51,66:51:1791:66:2320:-172.966,0,-126.227	0/1:89:42,47:42:1466:47:1654:-122.242,0,-105.441	0/0:231:229,0:229:8157:0:0:0,-68.9359,-733.789	0/0:120:120,0:120:4248:0:0:0,-36.1236,-382.408	0/0:140:139,1:139:4943:1:36:0,-38.5459,-441.423	0/1:16:8,8:8:282:8:284:-21.0546,0,-20.9046	0/0:161:161,0:161:5685:0:0:0,-48.4658,-511.772	0/0:103:103,0:103:3660:0:0:0,-31.0061,-329.603	0/0:182:182,0:182:6432:0:0:0,-54.7875,-578.974	0/0:42:42,0:42:1475:0:0:0,-12.6433,-133.038	0/0:66:66,0:66:2349:0:0:0,-19.868,-211.622	0/1:44:19,25:19:681:25:896:-67.6897,0,-48.3742	0/0:95:92,1:92:3265:1:36:0,-24.7608,-290.477	0/1:28:20,8:20:720:8:273:-16.4328,0,-56.6999	0/0:59:59,0:59:2064:0:0:0,-17.7608,-186.017	0/0:58:58,0:58:2060:0:0:0,-17.4597,-184.883	0/0:47:47,0:47:1669:0:0:0,-14.1484,-150.497	0/1:116:59,56:59:2052:56:1955:-140.897,0,-149.971	0/1:67:25,42:25:892:42:1482:-113.328,0,-60.4301	0/0:207:206,1:206:7248:1:21:0,-60.2134,-650.28	0/0:97:97,0:97:3451:0:0:0,-29.1999,-310.803
chr06	11503894	.	T	G	80941.6	PASS	AB=0.480207;ABP=28.7129;AC=45;AF=0.239362;AN=188;AO=3657;CIGAR=1X;DP=19051;DPB=19051;DPRA=0.965036;EPP=7944.08;EPPR=33393.7;GTI=2;LEN=1;MEANALT=1.06897;MQM=55.8214;MQMR=59.9128;NS=94;NUMALT=1;ODDS=5.18179;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129689;QR=545731;RO=15381;RPL=1796;RPP=5.51904;RPPR=4.5668;RPR=1861;RUN=1;SAF=1796;SAP=5.51904;SAR=1861;SRF=7744;SRP=4.62666;SRR=7637;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:93:46,47:46:1628:47:1630:-118.138,0,-118.81	0/0:274:273,1:273:9737:1:36:0,-78.8839,-872.56	0/1:364:218,146:218:7747:146:5205:-357.23,0,-587.675	0/0:388:386,1:386:13645:1:36:0,-113.26,-1224.14	0/1:160:88,72:88:3118:72:2565:-181.25,0,-232.679	0/1:120:64,56:64:2269:56:1979:-141.46,0,-168.345	0/0:333:333,0:333:11813:0:0:0,-100.243,-1062.99	0/1:305:184,121:184:6503:121:4288:-292.624,0,-493.539	0/1:191:97,94:97:3467:94:3362:-244.247,0,-254.739	0/1:164:84,80:84:2962:80:2853:-207.233,0,-217.443	0/1:180:98,82:98:3481:82:2902:-206.722,0,-259.307	0/0:161:161,0:161:5710:0:0:0,-48.4658,-514.021	0/1:168:72,96:72:2566:96:3399:-253.149,0,-180.615	0/1:207:118,89:118:4123:89:3132:-219.472,0,-308.436	0/0:157:157,0:157:5544:0:0:0,-47.2617,-499.078	0/1:129:65,64:65:2312:64:2285:-166.633,0,-169.508	0/0:195:195,0:195:6925:0:0:0,-58.7008,-623.312	0/0:182:181,0:181:6458:0:0:0,-54.4864,-580.938	0/0:128:128,0:128:4550:0:0:0,-38.5318,-409.665	0/0:384:383,1:383:13638:1:36:0,-112,-1223.58	0/1:254:146,108:146:5168:108:3795:-263.665,0,-388.783	0/0:125:125,0:125:4418:0:0:0,-37.6287,-397.796	0/1:93:55,36:55:1949:36:1283:-87.9277,0,-147.931	0/1:215:108,107:108:3851:107:3791:-275.833,0,-282.065	0/1:151:93,58:93:3308:58:2055:-138.745,0,-252.474	0/0:521:520,0:520:18455:0:0:0,-156.536,-1660.09	0/0:408:408,0:408:14506:0:0:0,-122.82,-1305.29	0/0:77:75,0:75:2641:0:0:0,-22.5772,-237.577	0/1:445:237,208:237:8381:208:7412:-532.458,0,-620.339	0/1:203:107,96:107:3789:96:3394:-244.024,0,-280.101	0/0:299:298,0:298:10555:0:0:0,-89.7069,-949.512	0/1:19:13,6:13:445:6:216:-14.0198,0,-34.6558	0/0:27:26,1:26:932:1:32:0,-4.93324,-81.0043	0/1:14:7,7:7:252:7:246:-18.233,0,-18.8145	0/1:20:15,5:15:540:5:176:-9.9706,0,-42.9159	0/0:29:29,0:29:1028:0:0:0,-8.72987,-92.833	0/1:417:195,222:195:6939:222:7865:-580.892,0,-499.008	0/0:285:285,0:285:10171:0:0:0,-85.7935,-914.992	0/0:152:152,0:152:5404:0:0:0,-45.7566,-486.485	0/1:13:6,7:6:216:7:252:-19.0293,0,-15.8771	0/0:276:275,0:275:9774:0:0:0,-82.7832,-879.204	0/0:105:104,0:104:3708:0:0:0,-31.3071,-333.564	0/1:309:141,168:141:4986:168:5999:-446.027,0,-355.873	0/1:163:89,74:89:3159:74:2644:-188.827,0,-235.44	0/1:136:76,60:76:2664:60:2132:-150.913,0,-199.009	0/1:175:72,102:72:2525:102:3558:-267.19,0,-174.494	0/1:303:148,155:148:5250:155:5518:-404.515,0,-381.293	0/0:312:309,3:309:10977:3:108:0,-83.8486,-977.755	0/0:198:198,0:198:7065:0:0:0,-59.6039,-635.908	0/1:322:176,146:176:6283:146:5186:-368.875,0,-468.605	0/1:286:137,149:137:4862:149:5291:-389.726,0,-351.642	0/1:24:14,10:14:500:10:352:-24.7774,0,-38.1115	0/0:354:354,0:354:12589:0:0:0,-106.565,-1132.27	0/0:124:124,0:124:4404:0:0:0,-37.3277,-396.534	0/1:42:16,26:16:568:26:923:-70.2856,0,-38.8086	0/1:267:149,118:149:5271:118:4161:-293.172,0,-394.155	0/0:98:98,0:98:3484:0:0:0,-29.5009,-313.773	1/1:8:0,8:0:0:8:280:-25.5264,-2.40824,0	0/1:34:13,21:13:468:21:733:-55.9764,0,-32.2223	0/1:196:106,90:106:3744:90:3220:-230.297,0,-278.144	0/0:251:249,2:249:8783:2:72:0,-68.7243,-783.627	0/1:19:8,11:8:288:11:392:-29.9005,0,-20.5478	0/0:246:246,0:246:8719:0:0:0,-74.0534,-784.711	0/0:381:378,3:378:13404:3:108:0,-104.617,-1195.93	0/0:138:138,0:138:4917:0:0:0,-41.5421,-442.679	0/0:208:208,0:208:7380:0:0:0,-62.6142,-664.249	0/0:215:213,2:213:7592:2:72:0,-57.8847,-676.055	0/0:276:275,1:275:9811:1:36:0,-79.4886,-879.326	0/0:105:105,0:105:3721:0:0:0,-31.6081,-335.093	0/0:181:180,1:180:6347:1:36:0,-50.8899,-567.723	0/0:221:221,0:221:7839:0:0:0,-66.5276,-705.545	0/1:36:22,14:22:788:14:504:-34.7219,0,-60.4077	0/0:138:138,0:138:4873:0:0:0,-41.5421,-438.703	0/1:167:92,75:92:3258:75:2666:-189.136,0,-243.166	0/1:387:184,203:184:6514:203:7151:-526.089,0,-469.746	0/0:324:323,0:323:11491:0:0:0,-97.2327,-1033.71	0/0:272:271,1:271:9623:1:36:0,-78.2819,-862.306	0/0:257:257,0:257:9110:0:0:0,-77.3647,-819.822	0/1:43:24,19:24:864:19:680:-48.3071,0,-65.1383	0/0:305:304,1:304:10824:1:36:0,-88.221,-970.476	0/0:297:297,0:297:10579:0:0:0,-89.4059,-951.63	0/0:465:463,2:463:16451:2:72:0,-133.142,-1473.4	0/0:195:195,0:195:6883:0:0:0,-58.7008,-619.544	0/0:159:159,0:159:5617:0:0:0,-47.8638,-505.595	0/1:190:93,97:93:3301:97:3415:-249.695,0,-240.113	0/0:302:300,2:300:10570:2:72:0,-84.0855,-944.298	0/1:92:50,42:50:1768:42:1496:-105.746,0,-131.707	0/0:162:162,0:162:5699:0:0:0,-48.7669,-513.028	0/0:186:186,0:186:6616:0:0:0,-55.9916,-595.516	0/0:169:169,0:169:5915:0:0:0,-50.8741,-532.468	0/1:285:137,147:137:4833:147:5219:-381.362,0,-349.28	0/1:152:59,93:59:2070:93:3296:-250.702,0,-140.707	0/0:194:194,0:194:6934:0:0:0,-58.3998,-624.077	0/0:251:251,0:251:8924:0:0:0,-75.5585,-803.149
chr06	11503899	.	CAACT	CACT	66339.7	PASS	AB=0.439207;ABP=234.556;AC=45;AF=0.239362;AN=188;AO=3196;CIGAR=1M1D3M;DP=18957;DPB=18316;DPRA=0.967453;EPP=6943.04;EPPR=34084.3;GTI=5;LEN=1;MEANALT=1.5;MQM=56.1915;MQMR=59.9225;NS=94;NUMALT=1;ODDS=0.0230778;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111168;QR=540380;RO=15699;RPL=1452;RPP=60.9416;RPPR=6.50715;RPR=1744;RUN=1;SAF=1452;SAP=60.9416;SAR=1744;SRF=7928;SRP=6.41973;SRR=7771;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:90:48,42:48:1658:42:1471:-105.34,0,-122.409	0/0:288:286,1:286:9776:1:36:0,-83.1569,-876.233	0/1:355:219,135:219:7561:135:4677:-312.815,0,-573.625	0/0:393:392,1:392:13475:1:36:0,-114.707,-1208.85	0/1:154:90,64:90:3146:64:2255:-156.436,0,-237.01	0/1:118:64,54:64:2208:54:1871:-132.478,0,-163.462	0/0:343:342,0:342:11873:0:0:0,-102.952,-1068.07	0/1:286:187,96:187:6423:96:3333:-213.869,0,-492.628	0/1:181:100,81:100:3463:81:2811:-197.955,0,-257.399	0/1:166:87,79:87:3012:79:2756:-198.008,0,-221.342	0/1:173:100,72:100:3423:72:2510:-173.769,0,-255.834	0/0:163:162,0:162:5612:0:0:0,-48.7669,-504.861	0/1:153:75,77:75:2558:77:2658:-192.535,0,-184.381	0/1:199:118,81:118:4090:81:2819:-193.66,0,-308.233	0/0:158:157,0:157:5439:0:0:0,-47.2617,-489.296	0/1:124:65,59:65:2269:59:2015:-143.964,0,-167.146	0/0:198:197,0:197:6803:0:0:0,-59.3029,-612.011	0/0:183:183,0:183:6307:0:0:0,-55.0885,-567.745	0/0:132:132,0:132:4545:0:0:0,-39.736,-409.228	0/0:389:388,1:388:13396:1:32:0,-113.902,-1202.28	0/1:249:159,89:159:5437:89:3080:-201.432,0,-414.531	0/0:126:126,0:126:4350:0:0:0,-37.9298,-391.685	0/1:91:58,33:58:1996:33:1151:-76.4174,0,-152.488	0/1:208:114,93:114:3847:93:3283:-232.549,0,-283.871	0/1:148:92,54:92:3177:54:1874:-123.642,0,-241.846	0/0:522:519,0:519:18011:0:0:0,-156.235,-1620.31	0/0:417:417,0:417:14333:0:0:0,-125.53,-1289.8	0/0:76:75,0:75:2549:0:0:0,-22.5772,-229.306	0/1:433:251,182:251:8612:182:6384:-443.902,0,-644.769	0/1:196:112,83:112:3876:83:2890:-200.811,0,-290.069	0/0:313:311,1:311:10768:1:36:0,-90.6829,-965.467	0/1:19:13,6:13:433:6:186:-11.3123,0,-33.5689	0/0:26:25,0:25:850:0:0:0,-7.52575,-76.4531	0/1:14:7,7:7:239:7:243:-17.9254,0,-17.6289	0/1:20:15,5:15:509:5:172:-9.70852,0,-40.1119	0/0:31:31,0:31:1069:0:0:0,-9.33193,-96.5155	0/1:399:199,199:199:6907:199:6896:-499.771,0,-501.553	0/0:291:289,0:289:9994:0:0:0,-86.9977,-899.156	0/0:154:154,0:154:5264:0:0:0,-46.3586,-473.916	0/1:11:6,5:6:215:5:171:-12.3719,0,-16.3878	0/0:286:286,0:286:9803:0:0:0,-86.0946,-882.259	0/0:105:104,0:104:3576:0:0:0,-31.3071,-321.697	0/1:293:145,148:145:4964:148:5154:-375.161,0,-358.727	0/1:152:90,62:90:3099:62:2076:-141.258,0,-233.382	0/1:124:77,47:77:2601:47:1588:-105.525,0,-196.994	0/1:165:76,89:76:2606:89:3109:-230.027,0,-185.034	0/1:290:148,139:148:5080:139:4844:-348.565,0,-370.57	0/0:319:316,3:316:10872:3:104:0,-86.3267,-968.714	0/0:206:204,0:204:7020:0:0:0,-61.4101,-631.522	0/1:302:183,117:183:6318:117:4122:-279.796,0,-478.04	0/1:276:139,135:139:4852:135:4776:-346.808,0,-354.007	0/1:20:14,6:14:466:6:212:-13.3961,0,-36.2381	0/0:360:358,0:358:12325:0:0:0,-107.769,-1108.7	0/0:125:125,0:125:4282:0:0:0,-37.6287,-385.573	0/1:37:17,20:17:600:20:707:-52.5085,0,-43.1915	0/1:251:152,99:152:5163:99:3436:-233.231,0,-389.271	0/0:103:103,0:103:3531:0:0:0,-31.0061,-318.008	1/1:8:0,8:0:0:8:284:-25.7621,-2.40824,0	0/1:33:14,19:14:476:19:676:-51.031,0,-33.2277	0/1:185:108,77:108:3699:77:2666:-184.079,0,-277.408	0/0:257:253,2:253:8709:2:53:0,-72.0408,-778.75	0/1:20:8,11:8:280:11:396:-29.9034,0,-19.4604	0/0:256:255,0:255:8811:0:0:0,-76.7626,-792.654	0/0:388:383,3:383:13264:3:108:0,-106.47,-1183.49	0/0:143:143,0:143:4925:0:0:0,-43.0473,-443.416	0/0:213:213,0:213:7376:0:0:0,-64.1194,-663.911	0/0:223:220,2:220:7539:2:72:0,-60.2438,-671.687	0/0:281:279,1:279:9572:1:36:0,-81.0524,-857.887	0/0:108:108,0:108:3672:0:0:0,-32.5112,-330.695	0/0:184:184,0:184:6405:0:0:0,-55.3895,-576.555	0/0:226:224,0:224:7688:0:0:0,-67.4307,-691.631	0/1:29:22,7:22:736:7:248:-13.8924,0,-57.823	0/0:141:141,0:141:4837:0:0:0,-42.4452,-435.498	0/1:157:94,63:94:3250:63:2193:-149.849,0,-245.464	0/1:379:189,190:189:6486:190:6635:-482.268,0,-469.742	0/0:328:327,0:327:11387:0:0:0,-98.4368,-1024.39	0/0:282:280,1:280:9519:1:36:0,-81.351,-853.115	0/0:263:260,0:260:8998:0:0:0,-78.2678,-809.43	0/1:39:24,15:24:820:15:528:-35.9183,0,-62.3725	0/0:316:316,0:316:10588:0:0:0,-95.1255,-952.912	0/0:299:296,0:296:10088:0:0:0,-89.1049,-907.518	0/0:480:478,2:478:16463:2:72:0,-137.658,-1474.56	0/0:196:196,0:196:6756:0:0:0,-59.0019,-608.141	0/0:163:162,0:162:5586:0:0:0,-48.7669,-502.533	0/1:185:94,91:94:3264:91:3158:-228.265,0,-238.297	0/0:308:305,2:305:10444:2:72:0,-85.9503,-933.02	0/1:85:50,34:50:1745:34:1175:-79.8236,0,-131.83	0/0:164:164,0:164:5705:0:0:0,-49.3689,-513.582	0/0:191:190,0:190:6483:0:0:0,-57.1957,-583.138	0/0:171:171,0:171:5886:0:0:0,-51.4761,-529.874	0/1:272:142,130:142:4870:130:4466:-318.882,0,-356.591	0/1:132:59,73:59:2011:73:2520:-187.092,0,-141.523	0/0:198:196,0:196:6810:0:0:0,-59.0019,-612.612	0/0:250:249,0:249:8601:0:0:0,-74.9565,-773.765
chr06	12248403	.	G	A	196566	PASS	AB=0.374942;ABP=1165.29;AC=138;AF=0.734043;AN=188;AO=9477;CIGAR=1X;DP=14858;DPB=14858;DPRA=15.9656;EPP=19910.1;EPPR=11540.5;GTI=8;LEN=1;MEANALT=1.04301;MQM=53.8744;MQMR=56.4785;NS=94;NUMALT=1;ODDS=1.67371;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=338702;QR=190838;RO=5377;RPL=9366;RPP=19629.2;RPPR=309.383;RPR=111;RUN=1;SAF=9410;SAP=20004.2;SAR=67;SRF=3130;SRP=317.883;SRR=2247;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:34,29:34:1220:29:1044:-74.3143,0,-91.0782	0/1:289:189,100:189:6730:100:3528:-228.467,0,-517.859	0/1:280:184,96:184:6567:96:3440:-223.364,0,-505.359	1/1:309:1,308:1:36:308:11039:-987.176,-89.42,0	1/1:56:1,55:1:36:55:1976:-173.699,-13.2663,0	1/1:84:0,84:0:0:84:3008:-267.59,-25.2865,0	1/1:294:3,291:3:108:291:10414:-924.937,-78.4277,0	0/1:275:167,108:167:5913:108:3859:-261.612,0,-447.306	0/1:201:106,95:106:3744:95:3404:-244.008,0,-276.437	0/1:202:118,84:118:4223:84:2978:-206.378,0,-319.235	0/1:112:61,50:61:2172:50:1779:-126.424,0,-161.747	1/1:91:0,91:0:0:91:3259:-291.963,-27.3937,0	0/1:128:92,36:92:3270:36:1286:-76.7844,0,-254.505	0/1:201:124,77:124:4365:77:2761:-187.279,0,-331.959	1/1:83:0,83:0:0:83:2976:-267.514,-24.9855,0	0/1:110:71,39:71:2509:39:1356:-89.0096,0,-192.699	0/1:122:86,36:86:2979:36:1279:-77.945,0,-230.941	1/1:82:0,81:0:0:81:2887:-257.157,-24.3834,0	1/1:69:0,69:0:0:69:2475:-221.069,-20.7711,0	0/1:507:305,202:305:10809:202:7256:-498.999,0,-818.419	0/1:408:258,150:258:9158:150:5371:-357.696,0,-700.413	1/1:122:0,122:0:0:122:4380:-393.013,-36.7257,0	0/1:170:88,82:88:3147:82:2940:-212.626,0,-231.856	0/1:225:120,105:120:4282:105:3772:-270.783,0,-317.571	0/1:127:92,35:92:3270:35:1232:-71.9865,0,-255.664	1/1:347:2,345:2:72:345:12329:-1100.6,-97.6207,0	1/1:332:0,332:0:0:332:11881:-1065.92,-99.942,0	1/1:40:0,40:0:0:40:1424:-128.033,-12.0412,0	0/1:510:325,185:325:11585:185:6615:-441.26,0,-887.561	0/1:282:180,102:180:6373:102:3644:-241.073,0,-487.95	0/1:248:169,78:169:5992:78:2757:-173.305,0,-463.034	1/1:9:0,9:0:0:9:320:-29.0941,-2.70927,0	1/1:21:0,21:0:0:21:741:-66.9155,-6.32163,0	0/1:9:8,1:8:284:1:36:-0.879959,0,-22.5766	0/1:10:4,6:4:140:6:205:-15.6227,0,-9.93428	1/1:9:0,9:0:0:9:324:-29.112,-2.70927,0	0/1:329:212,117:212:7539:117:4174:-276.381,0,-577.477	1/1:143:0,143:0:0:143:5111:-459.067,-43.0473,0	0/1:144:90,54:90:3186:54:1915:-128.645,0,-243.26	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7242	1/1:188:1,187:1:36:187:6673:-593.042,-52.9954,0	1/1:36:0,36:0:0:36:1285:-115.093,-10.8371,0	0/1:251:161,90:161:5734:90:3214:-212.349,0,-439.728	0/1:174:118,56:118:4202:56:2002:-127.601,0,-325.338	0/1:110:75,35:75:2638:35:1238:-78.4098,0,-204.277	1/1:171:0,171:0:0:171:6105:-548.027,-51.4761,0	0/1:238:155,83:155:5497:83:2975:-193.997,0,-421.58	1/1:221:1,220:1:36:220:7887:-701.704,-62.9362,0	1/1:135:0,135:0:0:135:4824:-433.208,-40.6391,0	0/1:311:187,124:187:6635:124:4431:-304.473,0,-502.692	1/1:259:0,259:0:0:259:9268:-830.932,-77.9668,0	0/1:15:6,9:6:216:9:324:-24.9668,0,-15.2499	1/1:181:0,181:0:0:181:6484:-581.335,-54.4864,0	0/1:99:52,47:52:1849:47:1664:-119.853,0,-136.654	0/1:13:10,3:10:356:3:108:-6.13645,0,-28.4197	0/1:248:167,81:167:5900:81:2892:-185.174,0,-455.354	1/1:94:0,94:0:0:94:3372:-302.595,-28.2968,0	0/1:10:8,2:8:279:2:72:-3.82451,0,-22.4132	1/1:25:0,25:0:0:25:892:-80.3231,-7.52575,0	0/1:159:113,46:113:4035:46:1644:-99.7331,0,-313.608	1/1:110:2,108:2:72:108:3871:-341.123,-26.2896,0	0/1:11:6,5:6:216:5:180:-13.2265,0,-16.4478	1/1:233:0,233:0:0:233:8359:-750.858,-70.14,0	1/1:201:3,197:3:99:197:6993:-618.838,-51.3216,0	0/1:85:43,42:43:1515:42:1502:-109.368,0,-110.776	1/1:116:0,116:0:0:116:4127:-369.548,-34.9195,0	1/1:203:2,201:2:72:201:7165:-635.798,-54.2789,0	1/1:134:1,133:1:36:133:4758:-423.49,-36.7397,0	1/1:33:0,33:0:0:33:1169:-105.246,-9.93399,0	1/1:88:0,88:0:0:88:3156:-282.607,-26.4906,0	1/1:98:0,98:0:0:98:3507:-314.771,-29.5009,0	0/1:35:9,26:9:324:26:927:-72.6497,0,-18.9511	0/1:170:97,73:97:3452:73:2614:-181.896,0,-258.206	0/1:135:77,58:77:2740:58:2071:-144.997,0,-205.964	0/1:565:307,258:307:10873:258:9211:-656.605,0,-806.507	1/1:175:2,173:2:68:173:6187:-548.994,-46.2291,0	1/1:99:0,99:0:0:99:3512:-315.114,-29.802,0	1/1:103:0,103:0:0:103:3688:-330.259,-31.0061,0	0/1:9:8,1:8:284:1:36:-0.879959,0,-23.1628	1/1:167:0,167:0:0:167:5970:-535.783,-50.272,0	1/1:159:0,159:0:0:159:5690:-508.355,-47.8638,0	1/1:428:0,428:0:0:428:15331:-1374.93,-128.841,0	0/1:172:124,48:124:4422:48:1716:-102.565,0,-345.851	1/1:85:0,85:0:0:85:3031:-272.805,-25.5876,0	0/1:135:84,51:84:2967:51:1807:-122.09,0,-225.908	0/1:228:160,68:160:5658:68:2435:-149.031,0,-438.86	0/1:71:49,22:49:1743:22:775:-48.5408,0,-135.623	1/1:79:1,78:1:27:78:2804:-248.441,-21.0816,0	1/1:100:0,100:0:0:100:3582:-319.976,-30.103,0	0/1:87:49,38:49:1735:38:1357:-95.9617,0,-130.094	0/1:149:100,49:100:3545:49:1748:-111.516,0,-273.386	0/1:124:98,26:98:3472:26:919:-45.6391,0,-274.69	1/1:145:1,144:1:36:144:5149:-458.205,-40.0579,0	1/1:135:0,135:0:0:135:4826:-432.805,-40.6391,0
chr06	12284362	.	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chr06	12311652	.	A	T	144149	PASS	AB=0.463468;ABP=55.6838;AC=138;AF=0.734043;AN=188;AO=6992;CIGAR=1X;DP=9450;DPB=9450;DPRA=0;EPP=15185.9;EPPR=5333.98;GTI=2;LEN=1;MEANALT=1.03191;MQM=47.2376;MQMR=41.9267;NS=94;NUMALT=1;ODDS=0.826232;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=250532;QR=87911;RO=2455;RPL=0;RPP=15185.9;RPPR=5333.98;RPR=6992;RUN=1;SAF=6992;SAP=15185.9;SAR=0;SRF=2455;SRP=5333.98;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:26,32:26:936:32:1144:-81.6116,0,-63.0111	0/1:49:19,30:19:680:30:1080:-77.7064,0,-44.3786	0/1:143:79,64:79:2829:64:2300:-155.116,0,-198.861	1/1:222:2,220:2:72:220:7877:-696.118,-60.11,0	1/1:68:0,68:0:0:68:2440:-216.922,-20.47,0	1/1:35:0,35:0:0:35:1248:-107.858,-10.5361,0	1/1:36:0,36:0:0:36:1284:-115.092,-10.8371,0	0/1:136:71,65:71:2525:65:2340:-159.664,0,-177.347	0/1:127:66,61:66:2353:61:2184:-150.001,0,-162.584	0/1:78:41,37:41:1476:37:1328:-95.318,0,-106.604	0/1:32:20,11:20:716:11:396:-26.1887,0,-53.1829	1/1:114:0,114:0:0:114:4100:-353.353,-34.3174,0	0/1:80:41,39:41:1472:39:1396:-96.941,0,-102.15	0/1:56:28,28:28:1004:28:1008:-73.425,0,-70.9507	1/1:89:0,89:0:0:89:3196:-285.969,-26.7917,0	0/1:54:32,21:32:1152:21:756:-51.6473,0,-84.4396	0/1:37:15,22:15:540:22:788:-57.346,0,-35.843	1/1:33:0,33:0:0:33:1180:-99.99,-9.93399,0	1/1:34:0,34:0:0:34:1206:-104.652,-10.235,0	0/1:265:135,130:135:4845:130:4653:-336.63,0,-343.678	0/1:178:91,87:91:3256:87:3116:-222.724,0,-229.923	1/1:142:0,142:0:0:142:5089:-455.386,-42.7463,0	0/1:130:74,56:74:2618:56:2004:-139.17,0,-191.014	0/1:46:20,26:20:720:26:928:-69.4386,0,-49.0085	0/1:147:96,51:96:3425:51:1832:-119.079,0,-250.143	1/1:235:0,235:0:0:235:8427:-755.183,-70.7421,0	1/1:350:0,350:0:0:350:12514:-1113.68,-105.361,0	1/1:43:0,43:0:0:43:1540:-137.458,-12.9443,0	0/1:312:160,152:160:5737:152:5417:-391.384,0,-414.522	0/1:151:90,61:90:3202:61:2192:-149.181,0,-230.916	0/1:70:36,34:36:1292:34:1216:-88.2061,0,-91.8406	1/1:7:0,7:0:0:7:252:-22.87,-2.10721,0	1/1:22:0,22:0:0:22:788:-70.4678,-6.62266,0	0/1:5:2,3:2:72:3:108:-8.0663,0,-5.05838	0/1:10:7,3:7:252:3:108:-6.46783,0,-19.0984	0/1:6:1,5:1:36:5:180:-14.0845,0,-1.64831	0/1:248:146,102:146:5241:102:3659:-253.961,0,-390.785	1/1:132:0,132:0:0:132:4724:-421.649,-39.736,0	0/1:47:21,26:21:756:26:936:-66.3037,0,-51.4869	0/1:5:2,3:2:72:3:108:-8.50047,0,-5.14998	1/1:127:0,127:0:0:127:4521:-402.266,-38.2308,0	1/1:38:0,38:0:0:38:1359:-121.502,-11.4391,0	0/1:218:134,84:134:4759:84:3020:-204.056,0,-346.838	0/1:59:28,31:28:1008:31:1112:-81.8006,0,-69.9323	0/1:69:42,27:42:1512:27:972:-66.6467,0,-112.507	1/1:153:1,152:1:36:152:5439:-482.733,-42.499,0	0/1:202:107,95:107:3844:95:3379:-230.466,0,-266.543	1/1:161:1,160:1:36:160:5752:-511.459,-44.9297,0	1/1:88:0,88:0:0:88:3133:-280.339,-26.4906,0	0/1:110:62,48:62:2228:48:1728:-121.374,0,-162.861	1/1:210:0,210:0:0:210:7536:-675.154,-63.2163,0	0/1:8:7,1:7:248:1:36:-1.17481,0,-19.8422	1/1:162:0,162:0:0:162:5812:-501.502,-48.7669,0	0/1:54:27,27:27:972:27:968:-69.5398,0,-70.1987	0/1:7:5,2:5:180:2:72:-4.45632,0,-13.7834	0/1:141:82,59:82:2925:59:2108:-145.702,0,-211.481	1/1:54:0,54:0:0:54:1928:-172.603,-16.2556,0	0/1:17:2,15:2:72:15:540:-43.696,0,-1.64386	1/1:22:0,22:0:0:22:783:-70.5774,-6.62266,0	0/1:68:39,29:39:1404:29:1044:-71.8346,0,-101.608	1/1:119:2,117:2:72:117:4208:-368.544,-29.1039,0	0/1:11:8,3:8:288:3:108:-6.72121,0,-22.5024	1/1:135:1,134:1:36:134:4820:-427.637,-37.0804,0	1/1:132:1,131:1:36:131:4677:-415.321,-36.1998,0	0/1:76:36,40:36:1281:40:1436:-105.266,0,-88.1698	1/1:104:0,104:0:0:104:3725:-332.934,-31.3071,0	1/1:162:2,160:2:72:160:5740:-506.59,-42.0482,0	1/1:212:6,206:6:197:206:7412:-644.947,-46.1041,0	1/1:38:0,38:0:0:38:1355:-120.84,-11.4391,0	1/1:30:0,30:0:0:30:1076:-93.2973,-9.0309,0	1/1:34:0,34:0:0:34:1208:-108.602,-10.235,0	0/1:20:11,9:11:396:9:311:-21.7801,0,-29.3406	0/1:199:103,96:103:3704:96:3425:-234.836,0,-256.366	0/1:94:63,31:63:2268:31:1089:-66.107,0,-165.328	0/1:148:69,79:69:2450:79:2821:-205.282,0,-167.742	1/1:172:0,172:0:0:172:6180:-553.132,-51.7772,0	1/1:122:2,119:2:68:119:4231:-358.419,-30.5037,0	1/1:64:0,64:0:0:64:2289:-196.87,-19.2659,0	0/1:11:8,3:8:288:3:108:-6.36124,0,-21.9065	1/1:125:1,124:1:36:124:4460:-392.831,-34.1261,0	1/1:107:0,107:0:0:107:3848:-331.569,-32.2102,0	1/1:287:0,287:0:0:287:10291:-918.653,-86.3956,0	0/1:79:41,38:41:1472:38:1368:-99.0999,0,-106.798	1/1:59:0,59:0:0:59:2124:-190.618,-17.7608,0	0/1:54:21,33:21:756:33:1188:-90.288,0,-50.3274	0/1:155:81,74:81:2916:74:2656:-191.058,0,-210.41	0/1:38:19,19:19:684:19:680:-45.1548,0,-47.3279	1/1:95:0,95:0:0:95:3390:-291.268,-28.5979,0	1/1:94:0,94:0:0:94:3384:-290.617,-28.2968,0	0/1:37:21,16:21:756:16:576:-40.6767,0,-54.8704	0/1:114:41,73:41:1472:73:2624:-199.1,0,-94.702	0/1:85:60,25:60:2160:25:900:-55.1752,0,-162.663	1/1:118:0,118:0:0:118:4224:-378.426,-35.5215,0	1/1:120:0,120:0:0:120:4316:-383.013,-36.1236,0
chr06	12311675	.	AATTTCTCA	AATCTCTGA,AATCTCTG	201376	PASS	AB=0.466956,0.52546;ABP=46.7809,28.995;AC=138,50;AF=0.734043,0.265957;AN=188;AO=7152,2445;CIGAR=3M1X3M1X1M,3M1X3M1D1X;DP=9676;DPB=9401.89;DPRA=0,1.13837;EPP=14770,5243;EPPR=0;GTI=2;LEN=9,8;MEANALT=2.40426,2.68852;MQM=47.4446,41.9534;MQMR=0;NS=94;NUMALT=2;ODDS=2.34308;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=251371,86005;QR=0;RO=0;RPL=7063,2437;RPP=14770,5243;RPPR=0;RPR=89,8;RUN=1,1;SAF=7152,2445;SAP=15533.4,5312.26;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:59:0,33,26:0:0:33,26:1143,894:-159.214,-70.0277,-60.0937,-89.5187,0,-81.692	1/2:51:0,31,19:0:0:31,19:1079,674:-137.064,-52.7216,-43.3897,-84.4731,0,-78.7536	1/2:144:0,64,79:0:0:64,79:2223,2777:-387.616,-214.341,-195.075,-173.303,0,-149.522	1/1:229:0,224,2:0:0:224,2:7899,72:-706.361,-67.4307,0,-700.598,-61.6421,-699.996	1/1:68:0,68,0:0:0:68,0:2425,0:-215.706,-20.47,0,-215.706,-20.47,-215.706	1/1:36:0,35,0:0:0:35,0:1231,0:-106.558,-10.5361,0,-106.558,-10.5361,-106.558	1/1:36:0,36,0:0:0:36,0:1284,0:-115.145,-10.8371,0,-115.145,-10.8371,-115.145	1/2:136:0,66,70:0:0:66,70:2298,2460:-371.232,-192.388,-172.52,-179.181,0,-158.109	1/2:129:0,63,66:0:0:63,66:2207,2340:-352.624,-180.544,-161.579,-172.418,0,-152.55	1/2:79:0,37,41:0:0:37,41:1301,1437:-219.492,-114.189,-103.051,-105.329,0,-92.9863	1/2:32:0,10,21:0:0:10,21:354,755:-87.9218,-59.2069,-56.1966,-28.708,0,-22.3864	1/1:120:0,119,0:0:0:119,0:4205,0:-364.331,-35.8226,0,-364.331,-35.8226,-364.331	1/2:84:0,42,42:0:0:42,42:1469,1488:-230.299,-115.238,-102.595,-115.399,0,-102.755	1/2:56:0,28,28:0:0:28,28:988,988:-158.275,-78.4353,-70.0065,-80.1869,0,-71.7581	1/1:91:0,88,0:0:0:88,0:3082,0:-276.2,-26.4906,0,-276.2,-26.4906,-276.2	1/2:57:0,24,33:0:0:24,33:830,1169:-158.935,-91.8926,-84.6679,-67.385,0,-57.451	1/2:38:0,23,15:0:0:23,15:815,539:-106.151,-42.3987,-35.475,-64.0958,0,-59.5804	1/1:34:0,33,0:0:0:33,0:1145,0:-98.9559,-9.93399,0,-98.9559,-9.93399,-98.9559	1/1:34:0,34,0:0:0:34,0:1204,0:-104.62,-10.235,0,-104.62,-10.235,-104.62	1/2:266:0,131,130:0:0:131,130:4626,4563:-737.432,-362.434,-322.999,-375.033,0,-335.899	1/2:180:0,88,90:0:0:88,90:3052,3149:-493.227,-248.057,-221.566,-245.253,0,-218.16	1/1:145:0,142,0:0:0:142,0:4995,0:-447.243,-42.7463,0,-447.243,-42.7463,-447.243	1/2:134:0,58,75:0:0:58,75:2044,2608:-372.072,-207.411,-189.951,-164.786,0,-142.208	1/2:46:0,26,20:0:0:26,20:920,715:-130.864,-56.4574,-48.6307,-74.7542,0,-68.7336	1/2:147:0,51,94:0:0:51,94:1816,3278:-403.639,-257.008,-241.656,-146.729,0,-118.433	1/1:243:0,241,0:0:0:241,0:8492,0:-761.226,-72.5482,0,-761.226,-72.5482,-761.226	1/1:357:0,356,1:0:0:356,1:12517,36:-1116.41,-107.167,0,-1114.1,-104.565,-1113.8	1/1:44:0,44,0:0:0:44,0:1536,0:-137.318,-13.2453,0,-137.318,-13.2453,-137.318	1/2:316:0,153,161:0:0:153,161:5409,5676:-893.756,-454.807,-408.75,-439.071,0,-390.605	1/2:155:0,66,88:0:0:66,88:2288,3131:-427.341,-243.618,-223.75,-183.705,0,-157.215	1/2:72:0,35,35:0:0:35,35:1194,1233:-194.584,-98.1118,-87.5757,-96.5059,0,-85.9699	1/1:7:0,7,0:0:0:7,0:236,0:-21.4308,-2.10721,0,-21.4308,-2.10721,-21.4308	1/1:22:0,22,0:0:0:22,0:789,0:-70.6014,-6.62266,0,-70.6014,-6.62266,-70.6014	1/2:5:0,3,2:0:0:3,2:102,72:-13.8948,-5.96147,-5.05838,-8.27162,0,-7.66956	1/2:10:0,3,7:0:0:3,7:107,245:-27.6856,-19.4916,-18.5885,-8.53106,0,-6.42385	1/2:6:0,5,1:0:0:5,1:180,35:-17.1259,-3.07967,-1.57452,-14.3855,0,-14.0845	1/2:256:0,109,146:0:0:109,146:3860,5125:-724.819,-411.253,-378.441,-313.56,0,-269.61	1/1:135:0,135,0:0:0:135,0:4769,0:-425.931,-40.6391,0,-425.931,-40.6391,-425.931	1/2:47:0,26,21:0:0:26,21:914,741:-129.331,-58.1778,-50.3511,-71.4921,0,-65.1704	1/2:5:0,3,2:0:0:3,2:103,72:-14.359,-6.05307,-5.14998,-8.65265,0,-8.05059	1/1:131:0,130,0:0:0:130,0:4582,0:-408.037,-39.1339,0,-408.037,-39.1339,-408.037	1/1:39:0,39,0:0:0:39,0:1380,0:-123.416,-11.7402,0,-123.416,-11.7402,-123.416	1/2:223:0,90,131:0:0:90,131:3194,4555:-616.729,-358.65,-331.557,-258.079,0,-218.644	1/2:60:0,32,28:0:0:32,28:1130,989:-169.917,-78.6415,-69.0085,-91.6227,0,-83.1939	1/2:70:0,28,42:0:0:28,42:982,1480:-197.537,-117.958,-109.529,-79.9268,0,-67.2835	1/1:161:0,157,1:0:0:157,1:5524,36:-495.269,-47.2617,0,-492.368,-44.3417,-492.067	1/2:204:0,95,106:0:0:95,106:3330,3732:-546.736,-287.519,-258.921,-259.26,0,-227.351	1/1:166:0,164,1:0:0:164,1:5749,36:-515.058,-49.3689,0,-512.177,-46.4155,-511.876	1/1:91:0,90,0:0:0:90,0:3137,0:-280.262,-27.0927,0,-280.262,-27.0927,-280.262	1/2:110:0,48,62:0:0:48,62:1689,2146:-306.915,-170.506,-156.056,-136.754,0,-118.09	1/1:216:0,214,0:0:0:214,0:7551,0:-677.379,-64.4204,0,-677.379,-64.4204,-677.379	1/2:8:0,1,7:0:0:1,7:36,246:-22.9272,-20.0019,-19.7009,-3.28202,0,-1.17481	1/1:167:0,166,0:0:0:166,0:5883,0:-508.909,-49.971,0,-508.909,-49.971,-508.909	1/2:53:0,27,26:0:0:27,26:953,916:-150.86,-74.0649,-65.937,-77.1437,0,-69.3169	1/2:7:0,2,5:0:0:2,5:72,174:-19.5629,-13.9441,-13.3421,-5.96147,0,-4.45632	1/2:142:0,61,80:0:0:61,80:2098,2767:-385.548,-216.741,-198.378,-168.865,0,-144.783	1/1:59:0,59,0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chr06	17112686	.	A	T	60661.8	PASS	AB=0.546545;ABP=122.273;AC=49;AF=0.260638;AN=188;AO=3487;CIGAR=1X;DP=13216;DPB=13216;DPRA=1.0043;EPP=7574.93;EPPR=21109.7;GTI=0;LEN=1;MEANALT=1.08929;MQM=59.9837;MQMR=59.9757;NS=94;NUMALT=1;ODDS=5.56913;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=124863;QR=346801;RO=9720;RPL=0;RPP=7574.93;RPPR=21109.7;RPR=3487;RUN=1;SAF=3487;SAP=7574.93;SAR=0;SRF=9720;SRP=21109.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:23,31:23:816:31:1108:-83.4156,0,-57.1465	0/1:280:113,167:113:4025:167:5975:-453.568,0,-278.15	0/1:195:80,115:80:2857:115:4105:-310.934,0,-198.665	0/0:344:343,1:343:12231:1:36:0,-99.956,-1097.04	0/0:97:91,5:91:3252:5:176:0,-13.0724,-276.715	0/0:63:62,1:62:2201:1:36:0,-15.3666,-194.756	0/0:118:118,0:118:4185:0:0:0,-35.5215,-376.834	0/1:223:88,135:88:3136:135:4807:-365.654,0,-215.337	0/1:183:92,91:92:3231:91:3234:-236.187,0,-235.923	0/1:148:63,85:63:2234:85:3048:-229.997,0,-156.768	0/1:50:28,22:28:1008:22:788:-56.1933,0,-75.9849	0/0:95:95,0:95:3392:0:0:0,-28.5978,-305.496	0/1:64:27,37:27:968:37:1328:-100.556,0,-68.1714	0/1:82:47,34:47:1673:34:1209:-84.4593,0,-126.2	0/0:82:82,0:82:2932:0:0:0,-24.6845,-264.115	0/1:55:24,31:24:856:31:1108:-83.4743,0,-60.8045	0/1:105:56,48:56:2008:48:1724:-123.778,0,-149.326	0/0:63:63,0:63:2248:0:0:0,-18.9649,-202.584	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/1:319:144,175:144:5137:175:6296:-470.7,0,-366.443	0/1:208:92,116:92:3276:116:4157:-311.694,0,-232.447	0/0:144:144,0:144:5152:0:0:0,-43.3483,-463.822	0/1:182:76,106:76:2716:106:3795:-286.96,0,-189.888	0/1:187:91,96:91:3236:96:3428:-252.438,0,-235.171	0/1:108:46,62:46:1629:62:2228:-168.273,0,-114.386	0/0:630:630,0:630:22518:0:0:0,-189.649,-2025.52	0/0:354:354,0:354:12652:0:0:0,-106.565,-1138.51	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.236	0/1:390:198,192:198:7020:192:6888:-502.584,0,-514.462	0/1:268:129,139:129:4632:139:4976:-367.313,0,-336.365	0/1:237:105,132:105:3749:132:4724:-353.972,0,-266.257	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.239	0/1:20:5,15:5:180:15:540:-42.9159,0,-10.5315	0/1:26:7,19:7:252:19:676:-53.3412,0,-15.2022	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:243:137,106:137:4897:106:3804:-269.407,0,-367.73	0/0:300:300,0:300:10706:0:0:0,-90.309,-963.449	0/1:48:15,33:15:536:33:1184:-92.4189,0,-34.1254	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/0:208:208,0:208:7437:0:0:0,-62.6142,-669.374	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:206:75,131:75:2661:131:4691:-360.337,0,-177.723	0/1:100:47,53:47:1684:53:1895:-140.724,0,-121.744	0/1:79:47,32:47:1683:32:1148:-79.8485,0,-127.975	0/0:108:108,0:108:3853:0:0:0,-32.5112,-346.965	0/1:160:47,113:47:1669:113:4039:-315.531,0,-102.331	0/0:206:200,6:200:7122:6:216:0,-42.2217,-621.249	0/0:211:211,0:211:7568:0:0:0,-63.5173,-681.157	0/1:277:140,137:140:5000:137:4912:-358.845,0,-366.764	0/0:187:187,0:187:6662:0:0:0,-56.2926,-599.62	0/1:24:12,12:12:417:12:424:-31.2717,0,-30.6355	0/0:151:151,0:151:5404:0:0:0,-45.4555,-486.491	0/1:66:25,41:25:892:41:1468:-112.548,0,-60.7317	0/1:30:6,24:6:212:24:860:-68.6909,0,-10.3939	0/1:243:97,146:97:3468:146:5244:-398.318,0,-239.182	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.866	0/1:30:18,12:18:640:12:432:-30.1903,0,-48.8984	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/1:152:68,84:68:2432:84:3021:-226.363,0,-173.379	0/0:109:108,0:108:3884:0:0:0,-32.5112,-349.391	0/1:17:10,7:10:352:7:252:-17.9114,0,-26.9007	0/0:301:301,0:301:10731:0:0:0,-90.61,-965.698	0/0:320:317,3:317:11330:3:108:0,-86.2544,-1009.5	0/1:140:61,79:61:2168:79:2824:-212.255,0,-153.243	0/0:117:117,0:117:4185:0:0:0,-35.2205,-376.83	0/0:355:351,4:351:12475:4:140:0,-93.9211,-1109.64	0/0:164:161,3:161:5738:3:104:0,-39.6661,-506.833	0/0:29:28,0:28:1008:0:0:0,-8.42884,-90.6765	0/0:103:103,0:103:3672:0:0:0,-31.0061,-330.685	0/0:122:122,0:122:4357:0:0:0,-36.7257,-391.807	0/1:25:8,17:8:284:17:608:-47.5263,0,-18.3776	0/1:139:53,86:53:1877:86:3057:-233.51,0,-127.364	0/1:80:37,43:37:1301:43:1548:-115.531,0,-93.3069	0/1:271:127,144:127:4532:144:5160:-382.961,0,-325.693	0/0:191:191,0:191:6760:0:0:0,-57.4967,-608.476	0/0:135:135,0:135:4821:0:0:0,-40.639,-434.031	0/0:279:279,0:279:9958:0:0:0,-83.9874,-896.159	0/1:16:4,12:4:144:12:428:-34.0423,0,-8.49714	0/0:155:155,0:155:5536:0:0:0,-46.6596,-498.367	0/0:130:130,0:130:4626:0:0:0,-39.1339,-416.502	0/0:252:250,0:250:8880:0:0:0,-75.2575,-798.827	0/1:115:54,61:54:1936:61:2183:-162.117,0,-139.898	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/1:120:69,51:69:2484:51:1832:-129.037,0,-187.689	0/1:168:86,81:86:3064:81:2903:-210.873,0,-225.356	0/1:49:25,24:25:900:24:864:-63.3321,0,-66.5705	0/0:88:88,0:88:3148:0:0:0,-26.4906,-282.183	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/1:27:12,15:12:432:15:540:-40.8087,0,-31.0934	0/1:58:32,26:32:1144:26:936:-67.0997,0,-85.8098	0/1:65:23,42:23:828:42:1504:-116.088,0,-55.2772	0/0:183:183,0:183:6529:0:0:0,-55.0885,-587.638	0/0:114:114,0:114:4080:0:0:0,-34.3174,-367.386
chr06	17112702	.	T	C	203659	PASS	AB=0.450356;ABP=138.191;AC=139;AF=0.739362;AN=188;AO=9615;CIGAR=1X;DP=13113;DPB=13113;DPRA=0;EPP=20544.3;EPPR=7529.49;GTI=0;LEN=1;MEANALT=1;MQM=59.9797;MQMR=59.9874;NS=94;NUMALT=1;ODDS=4.66959;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=342813;QR=125438;RO=3498;RPL=39;RPP=20544.3;RPPR=7538.14;RPR=9576;RUN=1;SAF=9615;SAP=20881.7;SAR=0;SRF=3497;SRP=7590.14;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:30,23:30:1080:23:803:-56.6315,0,-81.5587	0/1:279:168,111:168:6016:111:3960:-272.605,0,-457.557	0/1:190:112,78:112:3999:78:2790:-194.144,0,-302.904	1/1:340:1,339:1:36:339:12123:-1087.32,-98.7519,0	1/1:98:5,93:5:180:93:3308:-281.387,-12.9489,0	1/1:62:1,61:1:36:61:2180:-192.868,-15.0656,0	1/1:119:0,119:0:0:119:4272:-384.657,-35.8226,0	0/1:217:131,86:131:4716:86:3054:-209.766,0,-359.273	0/1:185:92,93:92:3296:93:3314:-242.787,0,-241.168	0/1:151:87,64:87:3116:64:2284:-160.366,0,-235.211	0/1:50:23,27:23:828:27:968:-72.3859,0,-59.7926	1/1:95:0,95:0:0:95:3356:-302.258,-28.5979,0	0/1:66:39,27:39:1385:27:963:-67.118,0,-105.079	0/1:79:34,45:34:1220:45:1599:-120.418,0,-86.3254	1/1:82:0,82:0:0:82:2933:-264.204,-24.6845,0	0/1:53:29,24:29:1044:24:853:-61.1348,0,-78.3202	0/1:105:48,57:48:1724:57:2031:-151.454,0,-123.837	1/1:64:0,64:0:0:64:2296:-206.901,-19.2659,0	1/1:33:0,33:0:0:33:1172:-105.787,-9.93399,0	0/1:316:174,142:174:6225:142:5082:-362.399,0,-465.219	0/1:205:116,89:116:4164:89:3175:-224.263,0,-313.228	1/1:144:0,144:0:0:144:5139:-462.652,-43.3483,0	0/1:181:106,75:106:3808:75:2673:-186.326,0,-288.43	0/1:186:97,89:97:3469:89:3180:-230.433,0,-256.425	0/1:107:62,45:62:2232:45:1599:-111.989,0,-168.933	1/1:619:0,619:0:0:619:21981:-1977.63,-186.338,0	1/1:349:0,349:0:0:349:12475:-1122.58,-105.059,0	1/1:54:0,54:0:0:54:1931:-174.066,-16.2556,0	0/1:386:192,194:192:6891:194:6917:-506.402,0,-504.057	0/1:267:138,129:138:4956:129:4581:-332.081,0,-365.812	0/1:239:134,105:134:4804:105:3755:-266.202,0,-360.569	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:23:0,23:0:0:23:811:-73.31,-6.92369,0	0/1:20:15,5:15:540:5:180:-10.5315,0,-42.9159	0/1:27:20,7:20:712:7:252:-14.9011,0,-56.2788	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:243:106,137:106:3801:137:4875:-365.752,0,-269.135	1/1:294:0,294:0:0:294:10468:-942.039,-88.5028,0	0/1:48:32,16:32:1144:16:572:-37.364,0,-88.8201	0/1:5:4,1:4:140:1:36:-2.09312,0,-11.4394	1/1:203:0,203:0:0:203:7234:-651.115,-61.1091,0	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	0/1:207:134,73:134:4791:73:2592:-171.217,0,-369.033	0/1:103:56,47:56:2012:47:1680:-120.481,0,-150.347	0/1:80:33,47:33:1184:47:1675:-126.954,0,-82.7859	1/1:105:0,105:0:0:105:3744:-337.159,-31.6082,0	0/1:161:115,46:115:4127:46:1641:-99.5117,0,-323.143	1/1:203:7,196:7:252:196:6934:-601.104,-38.0801,0	1/1:213:0,213:0:0:213:7596:-683.679,-64.1194,0	0/1:276:136,140:136:4852:140:4999:-366.974,0,-353.749	1/1:185:0,185:0:0:185:6585:-592.698,-55.6906,0	0/1:24:12,12:12:432:12:423:-31.1803,0,-31.9965	1/1:150:0,150:0:0:150:5365:-482.981,-45.1545,0	0/1:66:42,24:42:1491:24:847:-56.6807,0,-114.616	0/1:30:24,6:24:864:6:216:-10.7596,0,-69.0517	0/1:242:144,98:144:5160:98:3516:-243.8,0,-391.064	1/1:34:0,34:0:0:34:1201:-108.394,-10.235,0	0/1:31:13,18:13:459:18:635:-48.145,0,-32.3122	1/1:30:0,30:0:0:30:1058:-95.5296,-9.0309,0	0/1:150:83,67:83:2980:67:2391:-170.292,0,-223.277	1/1:108:0,108:0:0:108:3859:-347.505,-32.5112,0	0/1:18:7,11:7:252:11:396:-30.5642,0,-17.6104	1/1:294:0,294:0:0:294:10466:-941.862,-88.5028,0	1/1:321:3,318:3:108:318:11360:-1012.21,-86.5555,0	0/1:138:77,61:77:2768:61:2184:-155.284,0,-207.819	1/1:116:0,116:0:0:116:4151:-373.773,-34.9195,0	1/1:349:4,345:4:140:345:12273:-1091.47,-92.1149,0	1/1:165:3,162:3:108:162:5801:-512.127,-39.5948,0	1/1:29:0,29:0:0:29:1023:-92.3817,-8.72987,0	1/1:98:0,98:0:0:98:3494:-314.671,-29.5009,0	1/1:118:0,118:0:0:118:4176:-375.891,-35.5215,0	0/1:22:14,8:14:504:8:284:-19.2807,0,-39.0754	0/1:135:84,51:84:3024:51:1816:-123.082,0,-231.75	0/1:80:44,36:44:1580:36:1279:-91.33,0,-118.409	0/1:270:146,124:146:5244:124:4433:-317.086,0,-390.817	1/1:190:0,190:0:0:190:6798:-611.891,-57.1957,0	1/1:132:0,132:0:0:132:4708:-423.865,-39.736,0	1/1:275:0,275:0:0:275:9750:-877.455,-82.7833,0	0/1:16:12,4:12:428:4:144:-8.49714,0,-34.0423	1/1:155:0,155:0:0:155:5542:-498.905,-46.6597,0	1/1:127:0,127:0:0:127:4547:-409.396,-38.2308,0	1/1:253:0,253:0:0:253:9027:-812.41,-76.1606,0	0/1:116:63,53:63:2268:53:1884:-134.919,0,-169.463	1/1:67:0,67:0:0:67:2403:-216.526,-20.169,0	0/1:121:51,70:51:1836:70:2520:-190.627,0,-129.096	0/1:169:83,86:83:2984:86:3081:-226.643,0,-217.917	0/1:49:24,25:24:864:25:896:-66.2099,0,-63.3321	1/1:86:0,86:0:0:86:3059:-275.54,-25.8886,0	1/1:77:0,77:0:0:77:2743:-247.113,-23.1793,0	0/1:27:15,12:15:540:12:432:-31.0934,0,-40.8087	0/1:62:29,33:29:1040:33:1168:-86.7634,0,-75.2505	0/1:64:41,23:41:1476:23:828:-55.5782,0,-113.87	1/1:179:0,179:0:0:179:6383:-574.556,-53.8844,0	1/1:112:3,109:3:108:109:3916:-342.557,-23.6402,0
chr06	17908358	.	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chr06	18820613	.	A	G	200061	PASS	AB=0.572149;ABP=253.996;AC=137;AF=0.728723;AN=188;AO=9541;CIGAR=1X;DP=11933;DPB=11933;DPRA=25.6516;EPP=20712.3;EPPR=5186.31;GTI=7;LEN=1;MEANALT=1.05376;MQM=59.8664;MQMR=59.7884;NS=94;NUMALT=1;ODDS=2.12185;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=337727;QR=85157;RO=2387;RPL=2;RPP=20703.7;RPPR=5186.31;RPR=9539;RUN=1;SAF=1;SAP=20712.3;SAR=9540;SRF=0;SRP=5186.31;SRR=2387;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:86:35,51:35:1243:51:1816:-137.831,0,-86.2807	0/1:85:30,55:30:1059:55:1905:-146.072,0,-70.0267	0/1:545:244,301:244:8717:301:10615:-790.971,0,-620.317	1/1:338:0,338:0:0:338:11969:-1077.03,-101.748,0	1/1:139:0,139:0:0:139:4938:-444.388,-41.8432,0	1/1:42:0,42:0:0:42:1486:-134.033,-12.6433,0	1/1:103:0,103:0:0:103:3637:-327.528,-31.0061,0	0/1:220:112,108:112:3994:108:3837:-279.271,0,-293.373	0/1:145:60,85:60:2148:85:3006:-227.114,0,-149.932	0/1:112:46,66:46:1644:66:2338:-176.963,0,-114.526	0/1:29:5,24:5:180:24:825:-65.8308,0,-7.82219	1/1:73:0,73:0:0:73:2592:-233.518,-21.9752,0	0/1:41:19,21:19:671:21:744:-54.8836,0,-48.3059	0/1:28:5,23:5:180:23:800:-63.8684,0,-8.12322	1/1:45:0,45:0:0:45:1594:-143.749,-13.5464,0	0/1:37:12,25:12:428:25:877:-68.1023,0,-27.7207	0/1:20:10,10:10:352:10:360:-26.7221,0,-25.9976	1/1:28:0,28:0:0:28:971:-87.6904,-8.42884,0	0/1:17:2,15:2:72:15:531:-43.0028,0,-1.71921	0/1:275:121,153:121:4328:153:5468:-409.559,0,-306.995	0/1:177:78,99:78:2800:99:3504:-262.264,0,-198.957	1/1:227:0,227:0:0:227:8017:-721.557,-68.3338,0	0/1:195:80,115:80:2849:115:4047:-305.718,0,-197.942	1/1:81:3,78:3:108:78:2707:-233.795,-14.3083,0	0/1:138:68,70:68:2427:70:2503:-183.977,0,-177.143	1/1:416:0,416:0:0:416:14770:-1328.95,-125.228,0	0/1:301:147,154:147:5268:154:5473:-401.797,0,-383.606	0/1:22:7,15:7:252:15:527:-41.1375,0,-16.4063	0/1:401:176,225:176:6267:225:7941:-593.973,0,-443.404	0/1:165:50,115:50:1792:115:4061:-316.005,0,-111.86	0/1:135:66,69:66:2359:69:2449:-180.025,0,-171.927	1/1:10:0,10:0:0:10:360:-32.7439,-3.0103,0	1/1:44:0,44:0:0:44:1556:-140.329,-13.2453,0	1/1:13:0,13:0:0:13:445:-40.2156,-3.91339,0	0/1:13:4,9:4:144:9:324:-25.5925,0,-9.40023	1/1:21:0,21:0:0:21:737:-66.5168,-6.32163,0	0/1:98:35,63:35:1251:63:2217:-170.262,0,-83.307	1/1:184:0,183:0:0:183:6425:-577.856,-55.0885,0	0/1:24:10,14:10:360:14:483:-36.5665,0,-25.5196	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.1849	0/1:197:86,111:86:3077:111:3945:-295.935,0,-217.809	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	0/1:263:124,139:124:4439:139:4940:-365.569,0,-320.483	0/1:24:5,19:5:180:19:669:-53.3092,0,-9.32734	1/1:35:0,35:0:0:35:1234:-111.318,-10.5361,0	1/1:188:0,188:0:0:188:6632:-596.952,-56.5936,0	0/1:228:113,115:113:4010:115:4100:-300.538,0,-292.41	1/1:275:0,275:0:0:275:9762:-878.512,-82.7833,0	1/1:201:0,201:0:0:201:7067:-636.092,-60.507,0	0/1:163:67,96:67:2389:96:3365:-253.996,0,-166.188	1/1:238:0,237:0:0:237:8419:-757.338,-71.3441,0	0/1:13:4,9:4:144:9:324:-25.5925,0,-9.40023	1/1:198:0,198:0:0:198:7001:-630.145,-59.6039,0	0/1:105:36,69:36:1275:69:2424:-186.807,0,-83.4427	0/1:26:12,14:12:428:14:489:-36.5121,0,-31.0274	0/1:242:101,141:101:3590:141:4987:-376.099,0,-250.421	1/1:92:0,92:0:0:92:3265:-294.071,-27.6948,0	0/1:28:14,14:14:500:14:504:-37.2693,0,-36.9073	1/1:15:0,15:0:0:15:540:-48.9342,-4.51545,0	0/1:92:39,53:39:1396:53:1881:-141.87,0,-98.2443	1/1:89:1,88:1:36:88:3087:-274.458,-23.1934,0	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	1/1:298:0,298:0:0:298:10586:-952.592,-89.7069,0	1/1:285:1,284:1:21:284:10091:-906.01,-83.6936,0	0/1:82:35,47:35:1233:47:1666:-125.541,0,-86.5876	0/1:141:61,80:61:2188:80:2859:-215.097,0,-154.736	1/1:287:1,286:1:36:286:10126:-907.679,-82.7973,0	1/1:196:1,195:1:36:195:6919:-619.171,-55.4036,0	1/1:25:0,25:0:0:25:864:-78.0723,-7.52575,0	1/1:90:0,90:0:0:90:3168:-285.343,-27.0927,0	1/1:32:0,32:0:0:32:1152:-103.988,-9.63296,0	0/1:32:17,15:17:608:15:536:-38.9419,0,-45.4191	1/1:251:0,251:0:0:251:8845:-796.029,-75.5585,0	0/1:95:41,54:41:1472:54:1925:-144.925,0,-104.169	0/1:223:92,131:92:3268:131:4662:-352.608,0,-227.205	1/1:244:1,243:1:36:243:8638:-773.813,-69.853,0	1/1:235:0,235:0:0:235:8373:-753.542,-70.7421,0	1/1:155:0,155:0:0:155:5493:-494.489,-46.6597,0	0/1:24:7,17:7:252:17:612:-48.1887,0,-15.7996	1/1:164:0,164:0:0:164:5800:-522.094,-49.3689,0	1/1:119:0,119:0:0:119:4231:-380.967,-35.8226,0	1/1:397:1,395:1:36:395:13975:-1253.91,-115.969,0	0/1:46:13,33:13:464:33:1169:-91.6679,0,-28.2501	1/1:54:0,54:0:0:54:1927:-173.706,-16.2556,0	0/1:22:12,10:12:423:10:347:-24.941,0,-31.7824	0/1:65:25,40:25:883:40:1428:-109.25,0,-60.2205	0/1:22:13,9:13:460:9:324:-22.8832,0,-35.1112	1/1:56:0,56:0:0:56:1990:-179.368,-16.8577,0	1/1:60:0,60:0:0:60:2110:-190.16,-18.0618,0	0/1:17:5,12:5:180:12:428:-33.7413,0,-11.4346	0/1:51:16,35:16:572:35:1229:-95.5585,0,-36.4609	0/1:34:9,25:9:312:25:884:-69.4343,0,-18.1803	1/1:206:0,206:0:0:206:7245:-652.091,-62.0122,0	1/1:105:0,105:0:0:105:3703:-333.469,-31.6082,0
chr06	18822864	.	GCACTGACAGA	CCAGTATCAGA,CCACTGTCAGA	165354	PASS	AB=0.534401,0.453267;ABP=50.5196,90.6885;AC=138,50;AF=0.734043,0.265957;AN=188;AO=6187,2105;CIGAR=1X2M1X1M2X4M,1X5M1X4M;DP=8385;DPB=8384.82;DPRA=0,1.12844;EPP=13299.3,4513.36;EPPR=0;GTI=2;LEN=11,11;MEANALT=2.54255,3.07018;MQM=39.7404,59.6922;MQMR=0;NS=94;NUMALT=2;ODDS=0.0244001;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=216129,74121;QR=0;RO=0;RPL=16,7;RPP=13299.3,4513.36;RPPR=0;RPR=6171,2098;RUN=1,1;SAF=0,0;SAP=13437.9,4573.96;SAR=6187,2105;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:25:0,15,10:0:0:15,10:524,345:-68.1395,-28.3528,-23.8373,-40.1248,0,-37.1145	1/2:138:0,60,77:0:0:60,77:2126,2683:-379.771,-218.273,-200.212,-161.605,0,-138.426	1/2:92:0,58,34:0:0:58,34:2007,1212:-251.283,-99.1376,-81.6778,-152.49,0,-142.255	1/1:134:0,133,0:0:0:133,0:4624,0:-402.432,-40.037,0,-402.432,-40.037,-402.432	1/1:51:0,50,1:0:0:50,1:1735,36:-148.992,-15.0515,0,-146.054,-11.7543,-145.753	1/1:45:0,45,0:0:0:45,0:1519,0:-129.546,-13.5464,0,-129.546,-13.5464,-129.546	1/1:132:0,130,0:0:0:130,0:4569,0:-399.366,-39.1339,0,-399.366,-39.1339,-399.366	1/2:113:0,60,52:0:0:60,52:2068,1845:-307.77,-150.299,-132.237,-157.454,0,-141.8	1/2:54:0,29,25:0:0:29,25:987,848:-143.687,-69.0976,-60.3677,-74.9197,0,-67.394	1/2:83:0,47,34:0:0:47,34:1654,1184:-225.836,-96.3102,-82.1618,-129.553,0,-119.318	1/2:68:0,27,41:0:0:27,41:950,1451:-193.007,-118.535,-110.407,-74.8182,0,-62.4759	1/1:90:0,89,0:0:0:89,0:3117,0:-263.542,-26.7917,0,-263.542,-26.7917,-263.542	1/2:59:0,35,23:0:0:35,23:1221,820:-159.835,-66.84,-56.304,-92.9821,0,-86.0584	1/2:72:0,39,32:0:0:39,32:1371,1128:-198.075,-91.926,-80.1858,-106.232,0,-96.5993	1/1:58:0,56,0:0:0:56,0:1952,0:-170.06,-16.8577,0,-170.06,-16.8577,-170.06	1/2:70:0,41,28:0:0:41,28:1437,991:-192.476,-80.7983,-68.4561,-111.747,0,-103.318	1/2:58:0,31,25:0:0:31,25:1065,888:-152.558,-72.4204,-63.0885,-80.1869,0,-72.6611	1/1:66:0,65,0:0:0:65,0:2266,0:-191.944,-19.567,0,-191.944,-19.567,-191.944	1/2:56:0,28,26:0:0:28,26:972,924:-149.301,-75.366,-66.9372,-73.9907,0,-66.1639	1/2:108:0,58,50:0:0:58,50:2060,1749:-304.747,-142.638,-125.178,-162.456,0,-147.404	1/2:124:0,69,53:0:0:69,53:2382,1884:-337.069,-153.526,-132.755,-183.554,0,-167.599	1/1:63:0,63,0:0:0:63,0:2199,0:-193.822,-18.9649,0,-193.822,-18.9649,-193.822	1/2:21:0,4,17:0:0:4,17:134,608:-60.4058,-49.8378,-48.6337,-10.9008,0,-5.78327	1/2:72:0,65,7:0:0:65,7:2289,252:-199.277,-20.9217,-1.3548,-178.713,0,-176.606	1/2:64:0,40,23:0:0:40,23:1398,805:-173.984,-65.6202,-53.579,-108.484,0,-101.56	1/1:172:0,168,2:0:0:168,2:5796,72:-509.743,-50.573,0,-503.868,-44.6183,-503.266	1/2:545:0,343,198:0:0:343,198:11992,6985:-1498.93,-568.774,-465.521,-930.203,0,-870.6	1/2:28:0,12,16:0:0:12,16:420,561:-78.525,-45.8703,-42.258,-32.9964,0,-28.1799	1/2:284:0,135,146:0:0:135,146:4724,5183:-797.71,-422.385,-381.746,-375.418,0,-331.468	1/2:236:0,120,112:0:0:120,112:4214,3898:-644.285,-316.956,-280.833,-327.36,0,-293.645	1/2:97:0,39,57:0:0:39,57:1340,2032:-270.505,-165.785,-154.045,-104.858,0,-87.6994	1/1:14:0,14,0:0:0:14,0:494,0:-42.811,-4.21442,0,-42.811,-4.21442,-42.811	1/1:38:0,38,0:0:0:38,0:1322,0:-114.193,-11.4391,0,-114.193,-11.4391,-114.193	1/1:8:0,8,0:0:0:8,0:284,0:-24.4116,-2.40824,0,-24.4116,-2.40824,-24.4116	1/2:12:0,4,7:0:0:4,7:140,248:-30.925,-20.1979,-18.9937,-10.7123,0,-8.6051	1/1:18:0,18,0:0:0:18,0:629,0:-53.2749,-5.41854,0,-53.2749,-5.41854,-53.2749	1/2:195:0,88,106:0:0:88,106:3081,3779:-551.716,-308.108,-281.617,-243.665,0,-211.756	1/1:199:0,198,0:0:0:198,0:6910,0:-595.692,-59.6039,0,-595.692,-59.6039,-595.692	1/2:132:0,76,53:0:0:76,53:2612,1887:-351.273,-153.848,-130.969,-197.461,0,-181.507	1/2:4:0,2,2:0:0:2,2:72,72:-11.8435,-6.23466,-5.6326,-5.96147,0,-5.35941	1/2:127:0,72,55:0:0:72,55:2533,1947:-356.003,-158.941,-137.267,-197.409,0,-180.852	1/1:33:0,32,0:0:0:32,0:1134,0:-97.9439,-9.63296,0,-97.9439,-9.63296,-97.9439	1/2:79:0,42,37:0:0:42,37:1458,1286:-217.594,-104.887,-92.2435,-113.047,0,-101.909	1/2:45:0,21,24:0:0:21,24:734,852:-127.259,-69.7733,-63.4517,-57.831,0,-50.6063	1/1:65:0,65,0:0:0:65,0:2288,0:-199.067,-19.567,0,-199.067,-19.567,-199.067	1/1:89:0,88,0:0:0:88,0:3043,0:-268.891,-26.4906,0,-268.891,-26.4906,-268.891	1/2:125:0,62,60:0:0:62,60:2162,2106:-336.023,-171.395,-152.731,-164.651,0,-146.589	1/1:170:0,167,1:0:0:167,1:5796,32:-505.191,-50.272,0,-502.613,-47.6776,-502.312	1/1:72:0,71,0:0:0:71,0:2497,0:-217.807,-21.3731,0,-217.807,-21.3731,-217.807	1/2:86:0,40,45:0:0:40,45:1419,1584:-240.489,-128.962,-116.921,-111.602,0,-98.0552	1/1:152:0,150,0:0:0:150,0:5273,0:-464.32,-45.1545,0,-464.32,-45.1545,-464.32	1/2:13:0,8,5:0:0:8,5:280,165:-35.8472,-13.6685,-11.2602,-22.513,0,-21.0079	1/1:123:0,123,0:0:0:123,0:4298,0:-365.409,-37.0267,0,-365.409,-37.0267,-365.409	1/2:40:0,21,15:0:0:21,15:742,536:-102.745,-43.72,-37.3984,-59.0601,0,-54.5447	1/2:12:0,9,3:0:0:9,3:302,93:-30.8403,-7.77364,-5.06437,-23.3786,0,-22.4755	1/2:107:0,53,53:0:0:53,53:1813,1871:-293.1,-152.444,-136.49,-140.736,0,-124.781	1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chr06	21137351	.	T	C	418967	PASS	AB=0.529679;ABP=67.0702;AC=139;AF=0.739362;AN=188;AO=15601;CIGAR=1X;DP=19573;DPB=19573;DPRA=0;EPP=33802;EPPR=8519.7;GTI=3;LEN=1;MEANALT=1.09574;MQM=59.4225;MQMR=59.9651;NS=94;NUMALT=1;ODDS=3.31397;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=548017;QR=137934;RO=3958;RPL=7392;RPP=95.9168;RPPR=195.285;RPR=8209;RUN=1;SAF=7401;SAP=91.8681;SAR=8200;SRF=2284;SRP=207.155;SRR=1674;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:87:43,44:43:1495:44:1544:-112.944,0,-108.65	0/1:323:149,174:149:5181:174:6162:-457.037,0,-369.191	0/1:265:119,146:119:4183:146:5097:-378.941,0,-296.884	1/1:321:0,320:0:0:320:11155:-1003.49,-96.3296,0	1/1:208:5,198:5:180:198:6981:-611.759,-44.9129,0	1/1:110:0,110:0:0:110:3860:-346.544,-33.1133,0	1/1:258:0,258:0:0:258:9061:-815.207,-77.6657,0	0/1:336:169,167:169:5863:167:5868:-426.525,0,-426.65	0/1:212:105,107:105:3645:107:3776:-276.106,0,-264.442	0/1:196:78,118:78:2705:118:4121:-312.043,0,-184.693	0/1:76:35,41:35:1234:41:1437:-106.738,0,-88.4844	1/1:129:0,129:0:0:129:4469:-402.158,-38.8329,0	0/1:121:57,64:57:1971:64:2198:-161.491,0,-141.22	0/1:140:82,58:82:2880:58:2005:-138.506,0,-217.293	1/1:140:0,140:0:0:140:4906:-441.604,-42.1442,0	0/1:88:41,47:41:1422:47:1643:-121.502,0,-101.739	0/1:82:37,45:37:1299:45:1558:-115.662,0,-92.5251	1/1:101:0,101:0:0:101:3531:-317.949,-30.404,0	0/1:79:42,37:42:1464:37:1306:-93.9749,0,-108.27	0/1:507:247,259:247:8694:259:9066:-663.214,0,-629.938	0/1:336:163,173:163:5683:173:6055:-443.832,0,-409.51	1/1:218:1,216:1:36:216:7618:-681.853,-62.0851,0	0/1:197:104,93:104:3627:93:3294:-237.379,0,-267.338	0/1:251:135,116:135:4614:116:4100:-293.57,0,-339.876	0/1:173:77,95:77:2654:95:3349:-249.483,0,-186.971	1/1:611:2,609:2:72:609:21460:-1923.8,-177.093,0	1/1:529:0,527:0:0:527:18527:-1666.41,-158.643,0	1/1:88:1,87:1:36:87:3031:-269.335,-22.8924,0	0/1:611:242,369:242:8498:369:12879:-974.896,0,-580.909	0/1:225:85,140:85:2935:140:4915:-374.677,0,-196.643	0/1:236:111,125:111:3855:125:4423:-327.126,0,-276.108	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:19:0,19:0:0:19:656:-59.3594,-5.71957,0	1/1:6:0,6:0:0:6:208:-19.0559,-1.80618,0	0/1:8:4,4:4:140:4:144:-10.9035,0,-10.5363	0/1:7:1,6:1:36:6:207:-16.6888,0,-1.49106	0/1:375:173,202:173:5946:202:7084:-524.664,0,-422.379	1/1:367:0,367:0:0:367:12852:-1155.37,-110.478,0	0/1:115:54,61:54:1902:61:2102:-154.766,0,-136.838	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	1/1:474:0,474:0:0:474:16695:-1501.87,-142.688,0	1/1:67:0,67:0:0:67:2326:-209.595,-20.169,0	0/1:336:142,194:142:4950:194:6807:-511.32,0,-344.513	0/1:141:78,63:78:2725:63:2162:-152.377,0,-203.05	1/1:118:0,118:0:0:118:4130:-371.888,-35.5215,0	1/1:246:0,246:0:0:246:8679:-780.999,-74.0534,0	0/1:368:189,179:189:6614:179:6333:-458.785,0,-484.574	1/1:403:0,403:0:0:403:14196:-1276.59,-121.315,0	1/1:230:0,230:0:0:230:8062:-725.222,-69.2369,0	0/1:264:112,151:112:3958:151:5360:-402.514,0,-276.882	1/1:347:0,347:0:0:347:12255:-1102,-104.457,0	0/1:9:5,4:5:180:4:136:-9.86627,0,-13.8428	1/1:893:1,892:1:36:892:31523:-2832.42,-265.222,0	0/1:52:19,33:19:672:33:1161:-89.1412,0,-45.1533	0/1:28:13,15:13:460:15:540:-40.4968,0,-33.3065	0/1:287:119,168:119:4179:168:5881:-442.466,0,-289.832	1/1:133:0,133:0:0:133:4656:-419.097,-40.037,0	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:117:49,68:49:1708:68:2396:-180.674,0,-118.712	1/1:176:0,176:0:0:176:6152:-553.724,-52.9813,0	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	1/1:342:0,342:0:0:342:12021:-1081.43,-102.952,0	1/1:361:1,360:1:36:360:12671:-1135.82,-105.074,0	0/1:155:65,90:65:2254:90:3202:-241.672,0,-156.462	0/1:132:66,66:66:2340:66:2328:-169.641,0,-171.124	1/1:374:2,372:2:72:372:13103:-1171.62,-105.748,0	1/1:237:9,227:9:316:227:8017:-692.742,-42.5063,0	1/1:43:0,43:0:0:43:1490:-133.406,-12.9443,0	1/1:199:0,199:0:0:199:6992:-628.652,-59.905,0	1/1:124:0,124:0:0:124:4322:-389.159,-37.3277,0	0/1:30:16,14:16:568:14:504:-36.6672,0,-42.421	1/1:244:0,244:0:0:244:8548:-768.824,-73.4513,0	0/1:160:74,86:74:2550:86:3015:-223.309,0,-181.585	0/1:296:151,145:151:5261:145:5113:-370.986,0,-384.532	1/1:535:0,535:0:0:535:18820:-1691.94,-161.051,0	1/1:227:0,227:0:0:227:7985:-718.021,-68.3338,0	1/1:329:0,329:0:0:329:11509:-1033.92,-99.0389,0	0/1:15:8,7:8:265:7:252:-18.511,0,-19.6566	1/1:338:0,338:0:0:338:11885:-1069.44,-101.748,0	1/1:280:0,280:0:0:280:9838:-885.063,-84.2884,0	1/1:525:1,524:1:36:524:18515:-1662.25,-154.442,0	0/1:141:75,66:75:2598:66:2348:-169.048,0,-191.621	1/1:118:0,118:0:0:118:4176:-375.968,-35.5215,0	0/1:157:71,86:71:2440:86:2991:-222.149,0,-172.593	0/1:230:120,110:120:4156:110:3841:-276.508,0,-304.995	0/1:90:32,58:32:1096:58:2014:-154.353,0,-71.8501	1/1:139:0,139:0:0:139:4853:-436.48,-41.8432,0	1/1:116:0,116:0:0:116:4010:-360.685,-34.9195,0	0/1:62:29,33:29:1015:33:1117:-82.0943,0,-72.997	0/1:119:53,66:53:1837:66:2267:-168.346,0,-129.786	0/1:117:80,37:80:2786:37:1292:-81.359,0,-215.761	1/1:277:0,276:0:0:276:9693:-871.931,-83.0843,0	1/1:183:0,183:0:0:183:6395:-575.58,-55.0885,0
chr06	21563212	.	A	T	26791.9	PASS	AB=0.465389;ABP=39.3862;AC=46;AF=0.244681;AN=188;AO=1636;CIGAR=1X;DP=7499;DPB=7499;DPRA=1.09714;EPP=3520.88;EPPR=12632.5;GTI=1;LEN=1;MEANALT=1.0566;MQM=59.9694;MQMR=59.9956;NS=94;NUMALT=1;ODDS=1.35904;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58527;QR=209713;RO=5860;RPL=1633;RPP=3529.53;RPPR=12632.5;RPR=3;RUN=1;SAF=1635;SAP=3546.86;SAR=1;SRF=5860;SRP=12727.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:33,20:33:1165:20:720:-49.1742,0,-89.2004	0/1:62:37,25:37:1324:25:857:-58.7673,0,-100.798	0/1:141:69,72:69:2464:72:2579:-189.913,0,-179.569	0/0:137:137,0:137:4924:0:0:0,-41.2411,-443.308	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/0:55:55,0:55:1955:0:0:0,-16.5566,-176.225	0/0:108:108,0:108:3856:0:0:0,-32.5112,-347.223	0/1:100:52,48:52:1864:48:1722:-125.163,0,-137.936	0/1:78:44,34:44:1584:34:1207:-85.4534,0,-119.371	0/1:82:45,37:45:1604:37:1324:-94.7776,0,-119.966	0/1:63:37,26:37:1324:26:921:-64.2403,0,-100.497	0/0:115:114,1:114:4084:1:36:0,-31.0202,-364.147	0/1:63:31,32:31:1116:32:1135:-83.4926,0,-81.7868	0/1:92:47,45:47:1692:45:1616:-118.035,0,-124.872	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/1:68:41,27:41:1468:27:968:-66.9627,0,-111.946	0/1:66:33,33:33:1184:33:1154:-84.2943,0,-87.0003	0/0:30:30,0:30:1063:0:0:0,-9.0309,-95.9808	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.533	0/1:154:76,78:76:2724:78:2800:-205.881,0,-199.044	0/1:130:74,56:74:2644:56:2012:-142.219,0,-199.073	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.072	0/1:84:37,47:37:1332:47:1677:-125.93,0,-94.8959	0/1:44:33,11:33:1176:11:396:-22.7374,0,-92.9024	0/1:99:46,53:46:1652:53:1904:-141.836,0,-119.167	0/0:146:144,1:144:5165:1:36:0,-40.4109,-461.389	0/0:272:272,0:272:9733:0:0:0,-81.8802,-875.917	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.239	0/1:172:92,80:92:3304:80:2876:-207.298,0,-245.801	0/1:98:59,39:59:2112:39:1404:-97.1583,0,-160.848	0/1:86:52,34:52:1872:34:1224:-84.5785,0,-142.871	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:27:27,0:27:963:0:0:0,-8.12781,-86.9859	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:15:15,0:15:521:0:0:0,-4.51545,-47.2163	0/1:175:91,84:91:3257:84:3011:-218.54,0,-240.669	0/0:96:96,0:96:3448:0:0:0,-28.8989,-310.532	0/1:64:28,36:28:1008:36:1296:-97.678,0,-71.7704	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:121:121,0:121:4325:0:0:0,-36.4246,-389.425	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.701	0/1:129:70,59:70:2500:59:2116:-151.876,0,-186.42	0/1:60:30,30:30:1076:30:1076:-79.0911,0,-79.0911	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.769	0/0:117:117,0:117:4175:0:0:0,-35.2205,-375.933	0/1:88:52,36:52:1859:36:1296:-90.4533,0,-141.098	0/0:101:100,1:100:3565:1:36:0,-26.8058,-317.459	0/0:72:72,0:72:2572:0:0:0,-21.6742,-231.73	0/1:94:35,58:35:1260:58:2080:-159.115,0,-85.3499	0/0:82:82,0:82:2915:0:0:0,-24.6845,-262.586	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/0:111:111,0:111:3976:0:0:0,-33.4143,-358.03	0/1:33:18,15:18:644:15:536:-38.6408,0,-48.3566	0/1:5:2,3:2:72:3:104:-8.19766,0,-5.33157	0/1:121:61,60:61:2192:60:2123:-154.914,0,-161.121	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/1:15:11,4:11:396:4:144:-8.79817,0,-31.4673	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:83:53,30:53:1900:30:1080:-72.5254,0,-146.292	0/0:111:111,0:111:3975:0:0:0,-33.4143,-357.94	0/1:8:5,3:5:176:3:107:-7.57393,0,-13.7768	0/0:78:78,0:78:2796:0:0:0,-23.4803,-251.88	0/0:136:134,2:134:4780:2:72:0,-34.1034,-423.522	0/1:79:34,45:34:1224:45:1612:-121.589,0,-86.6841	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.847	0/0:100:99,1:99:3544:1:36:0,-26.5047,-315.571	0/0:149:149,0:149:5337:0:0:0,-44.8535,-480.461	0/0:62:62,0:62:2223:0:0:0,-18.6639,-200.333	0/0:44:44,0:44:1564:0:0:0,-13.2453,-141.052	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/1:18:12,6:12:432:6:216:-14.372,0,-33.8027	0/0:199:199,0:199:7120:0:0:0,-59.905,-640.859	0/1:79:49,30:49:1756:30:1076:-73.3633,0,-134.543	0/1:188:111,76:111:3972:76:2718:-188.209,0,-301.018	0/0:58:58,0:58:2068:0:0:0,-17.4597,-186.391	0/0:105:105,0:105:3764:0:0:0,-31.6081,-338.959	0/0:77:75,2:75:2696:2:72:0,-16.3426,-236.047	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/0:65:65,0:65:2317:0:0:0,-19.5669,-208.789	0/0:96:96,0:96:3421:0:0:0,-28.8989,-308.103	0/0:227:226,1:226:8065:1:36:0,-64.7355,-722.272	0/1:44:20,24:20:716:24:855:-64.0249,0,-51.5224	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/1:40:17,23:17:603:23:819:-61.9904,0,-42.5583	0/1:112:68,44:68:2444:44:1567:-107.606,0,-186.499	0/1:17:9,8:9:324:8:288:-21.1499,0,-24.3883	0/0:68:68,0:68:2435:0:0:0,-20.47,-219.405	0/0:85:85,0:85:3027:0:0:0,-25.5875,-272.661	0/1:74:42,32:42:1508:32:1152:-81.7139,0,-113.738	0/1:144:69,75:69:2480:75:2675:-197.647,0,-180.105	0/1:62:24,38:24:864:38:1364:-104.397,0,-59.4187	0/0:78:78,0:78:2785:0:0:0,-23.4803,-250.889	0/0:96:96,0:96:3436:0:0:0,-28.8989,-309.453
chr06	22149663	.	G	A	21930.7	PASS	AB=0.518459;ABP=10.3856;AC=46;AF=0.244681;AN=188;AO=1298;CIGAR=1X;DP=5121;DPB=5121;DPRA=1.09575;EPP=2821.58;EPPR=8295.86;GTI=0;LEN=1;MEANALT=1.08163;MQM=59.9884;MQMR=59.9997;NS=94;NUMALT=1;ODDS=5.62122;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46502;QR=136777;RO=3819;RPL=1298;RPP=2821.58;RPPR=8295.86;RPR=0;RUN=1;SAF=0;SAP=2821.58;SAR=1298;SRF=0;SRP=8295.86;SRR=3819;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:26:9,17:9:320:17:612:-47.5867,0,-21.3156	0/1:34:21,13:21:756:13:468:-32.2246,0,-58.1322	0/1:96:56,40:56:2008:40:1432:-100.279,0,-152.094	0/0:151:148,3:148:5304:3:108:0,-35.3804,-467.419	0/0:36:36,0:36:1280:0:0:0,-10.8371,-115.503	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/1:87:39,48:39:1396:48:1720:-128.896,0,-99.7495	0/1:41:20,21:20:712:21:756:-56.025,0,-52.0644	0/1:43:30,13:30:1076:13:464:-29.1532,0,-84.2086	0/1:66:36,30:36:1292:30:1076:-77.2849,0,-96.7158	0/0:74:74,0:74:2644:0:0:0,-22.2762,-238.207	0/1:45:23,22:23:824:22:792:-58.0593,0,-60.937	0/1:29:14,15:14:504:15:540:-40.2067,0,-36.9682	0/0:54:53,1:53:1896:1:36:0,-12.6573,-167.32	0/1:42:19,23:19:680:23:820:-61.4793,0,-48.8859	0/1:35:18,17:18:648:17:612:-44.8774,0,-48.1158	0/0:35:35,0:35:1244:0:0:0,-10.536,-112.265	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/1:105:43,61:43:1540:61:2176:-164.479,0,-107.265	0/1:97:55,41:55:1972:41:1458:-102.256,0,-148.496	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.165	0/1:91:35,55:35:1256:55:1968:-149.943,0,-85.8928	0/1:38:11,27:11:392:27:972:-76.3588,0,-24.1809	0/1:49:32,17:32:1133:17:612:-40.663,0,-87.5262	0/0:97:97,0:97:3492:0:0:0,-29.1999,-314.489	0/0:158:158,0:158:5668:0:0:0,-47.5627,-510.238	0/0:24:24,0:24:852:0:0:0,-7.22472,-77.0004	0/1:155:73,82:73:2612:82:2932:-217.455,0,-188.668	0/1:65:27,38:27:972:38:1356:-102.774,0,-68.231	0/1:68:32,36:32:1148:36:1288:-95.7535,0,-83.1598	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:15:7,8:7:248:8:288:-21.752,0,-18.1487	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/1:146:70,76:70:2504:76:2728:-201.812,0,-181.662	0/0:58:58,0:58:2057:0:0:0,-17.4597,-185.4	0/1:47:29,18:29:1036:18:648:-44.5035,0,-79.4055	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/1:89:42,47:42:1512:47:1688:-125.415,0,-109.583	0/1:60:37,23:37:1328:23:824:-56.4215,0,-101.76	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:64:64,0:64:2300:0:0:0,-19.2659,-207.261	0/1:34:17,17:17:604:17:612:-45.1738,0,-44.4556	0/0:105:105,0:105:3760:0:0:0,-31.6081,-338.6	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:85:24,61:24:856:61:2177:-170.607,0,-51.7736	0/0:46:46,0:46:1644:0:0:0,-13.8474,-148.249	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/1:54:20,34:20:720:34:1220:-93.8512,0,-48.8732	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:95:47,48:47:1688:48:1719:-126.398,0,-123.609	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:33:19,14:19:676:14:504:-35.7641,0,-51.234	0/0:89:87,2:87:3116:2:72:0,-19.9549,-273.83	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/0:78:78,0:78:2804:0:0:0,-23.4803,-252.599	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.27	0/1:52:21,31:21:756:31:1108:-84.3768,0,-52.7137	0/0:50:50,0:50:1784:0:0:0,-15.0515,-160.843	0/0:92:92,0:92:3292:0:0:0,-27.6948,-296.499	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.716	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/0:38:38,0:38:1356:0:0:0,-11.4391,-122.34	0/0:40:40,0:40:1428:0:0:0,-12.0412,-128.818	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/0:60:60,0:60:2132:0:0:0,-18.0618,-192.149	0/1:51:27,24:27:972:24:864:-62.73,0,-72.4454	0/1:74:27,47:27:972:47:1680:-129.211,0,-65.5217	0/0:72:72,0:72:2584:0:0:0,-21.6742,-232.809	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:53:53,0:53:1892:0:0:0,-15.9546,-170.558	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.616	0/0:85:85,0:85:3040:0:0:0,-25.5875,-273.83	0/1:58:33,25:33:1188:25:900:-63.8613,0,-89.7689	0/0:52:52,0:52:1860:0:0:0,-15.6536,-167.68	0/1:25:10,15:10:360:15:536:-41.0491,0,-25.2186	0/1:95:44,50:44:1572:50:1792:-132.901,0,-113.115	0/1:17:9,8:9:324:8:284:-20.7858,0,-24.3883	0/0:51:51,0:51:1811:0:0:0,-15.3525,-163.271	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.161	0/1:51:32,19:32:1148:19:684:-46.5378,0,-88.2773	0/1:94:46,48:46:1648:48:1720:-126.789,0,-120.312	0/1:49:15,34:15:540:34:1212:-94.6359,0,-34.1861	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/0:71:71,0:71:2544:0:0:0,-21.3731,-229.211
chr06	22622940	.	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chr06	22965150	.	G	T	148789	PASS	AB=0.483018;ABP=13.9993;AC=141;AF=0.75;AN=188;AO=6983;CIGAR=1X;DP=9263;DPB=9263;DPRA=0;EPP=15036.4;EPPR=4917.07;GTI=1;LEN=1;MEANALT=1.09574;MQM=59.9759;MQMR=60;NS=94;NUMALT=1;ODDS=0.1197;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=249843;QR=81046;RO=2271;RPL=6969;RPP=15045;RPPR=4917.07;RPR=14;RUN=1;SAF=6982;SAP=15157.7;SAR=1;SRF=2271;SRP=4934.42;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:41,18:41:1464:18:633:-39.5343,0,-114.295	0/1:55:38,17:38:1360:17:608:-38.4954,0,-106.144	0/1:276:136,140:136:4868:140:5001:-367.153,0,-355.189	1/1:128:0,128:0:0:128:4585:-412.813,-38.5318,0	1/1:45:1,44:1:36:44:1575:-138.443,-9.94808,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:61:0,61:0:0:61:2196:-197.905,-18.3628,0	0/1:172:79,93:79:2776:93:3332:-248.32,0,-198.302	0/1:41:23,18:23:819:18:640:-45.5871,0,-61.6893	0/1:65:36,29:36:1292:29:1036:-73.987,0,-97.0168	0/1:119:58,61:58:2084:61:2192:-161.723,0,-152.007	1/1:103:0,103:0:0:103:3704:-333.56,-31.0061,0	0/1:82:43,39:43:1544:39:1389:-100.624,0,-114.569	0/1:137:64,73:64:2280:73:2620:-194.806,0,-164.221	1/1:69:0,69:0:0:69:2467:-222.283,-20.7711,0	0/1:80:42,38:42:1484:38:1364:-98.9783,0,-109.769	0/1:51:25,26:25:896:26:932:-68.8463,0,-65.6078	1/1:41:0,41:0:0:41:1471:-132.686,-12.3422,0	1/1:47:0,47:0:0:47:1683:-151.756,-14.1484,0	0/1:197:106,91:106:3785:91:3253:-233.687,0,-281.545	0/1:124:66,58:66:2364:58:2065:-148.792,0,-175.691	1/1:94:0,94:0:0:94:3376:-304.054,-28.2968,0	0/1:42:25,17:25:900:17:612:-42.7702,0,-68.6778	0/1:33:15,18:15:517:18:633:-47.3611,0,-36.9206	0/1:82:53,29:53:1900:29:1040:-69.2299,0,-146.593	1/1:239:0,239:0:0:239:8560:-770.395,-71.9462,0	1/1:190:0,190:0:0:190:6804:-612.429,-57.1957,0	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	0/1:242:115,127:115:4100:127:4549:-336.725,0,-296.335	0/1:104:50,54:50:1777:54:1929:-142.566,0,-128.904	0/1:56:28,28:28:1000:28:1008:-74.1787,0,-73.4577	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	0/1:193:83,109:83:2965:109:3903:-293.305,0,-208.924	1/1:117:1,116:1:36:116:4144:-369.545,-31.6222,0	0/1:117:66,50:66:2350:50:1791:-126.192,0,-176.479	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	1/1:79:0,78:0:0:78:2808:-252.609,-23.4803,0	1/1:49:0,49:0:0:49:1760:-158.684,-14.7505,0	0/1:180:102,77:102:3644:77:2740:-192.597,0,-273.921	0/1:61:33,28:33:1180:28:1000:-71.9525,0,-88.1452	1/1:47:0,47:0:0:47:1677:-151.217,-14.1484,0	1/1:63:0,62:0:0:62:2216:-199.493,-18.6639,0	0/1:121:66,55:66:2368:55:1956:-139.888,0,-176.953	1/1:183:0,183:0:0:183:6539:-588.591,-55.0885,0	1/1:125:0,125:0:0:125:4456:-401.2,-37.6288,0	0/1:172:103,69:103:3672:69:2477:-171.406,0,-278.905	1/1:150:0,150:0:0:150:5392:-485.4,-45.1545,0	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	1/1:218:0,218:0:0:218:7816:-703.436,-65.6245,0	0/1:96:62,34:62:2224:34:1209:-80.2153,0,-171.525	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/1:174:80,94:80:2868:94:3367:-250.866,0,-205.978	1/1:16:0,16:0:0:16:570:-51.6279,-4.81648,0	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:95:52,43:52:1872:43:1540:-110.295,0,-140.161	1/1:180:0,180:0:0:180:6447:-580.315,-54.1854,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	1/1:219:1,217:1:36:217:7749:-693.85,-62.3661,0	1/1:202:1,201:1:32:201:7220:-646.651,-57.6087,0	0/1:115:49,66:49:1727:66:2361:-178.129,0,-121.093	1/1:98:0,98:0:0:98:3470:-311.952,-29.5009,0	1/1:150:1,149:1:36:149:5339:-477.044,-41.5562,0	1/1:212:2,210:2:72:210:7516:-669.643,-56.9816,0	1/1:73:0,73:0:0:73:2604:-234.448,-21.9752,0	1/1:51:0,51:0:0:51:1836:-165.521,-15.3525,0	1/1:55:0,55:0:0:55:1963:-176.945,-16.5567,0	0/1:27:14,13:14:504:13:468:-34.3318,0,-37.5703	1/1:95:0,95:0:0:95:3373:-303.784,-28.5979,0	0/1:126:63,63:63:2228:63:2244:-164.294,0,-162.852	0/1:165:81,83:81:2904:83:2964:-217.373,0,-211.976	1/1:165:0,165:0:0:165:5917:-532.636,-49.67,0	1/1:196:0,196:0:0:196:6998:-629.882,-59.0019,0	1/1:102:0,102:0:0:102:3655:-329.153,-30.7051,0	0/1:21:11,10:11:396:10:360:-26.4227,0,-29.6611	1/1:117:1,116:1:36:116:4172:-372.062,-31.6222,0	1/1:122:0,122:0:0:122:4377:-394.101,-36.7257,0	1/1:100:0,100:0:0:100:3548:-319.528,-30.103,0	0/1:58:26,31:26:919:31:1116:-83.2332,0,-65.5079	1/1:115:0,115:0:0:115:4105:-369.634,-34.6185,0	0/1:48:18,30:18:629:30:1051:-80.4491,0,-42.4843	0/1:134:66,68:66:2360:68:2437:-179.246,0,-172.321	0/1:24:11,13:11:381:13:468:-35.2349,0,-27.3959	1/1:73:0,73:0:0:73:2612:-235.328,-21.9752,0	1/1:86:0,86:0:0:86:3070:-276.528,-25.8886,0	0/1:96:52,43:52:1849:43:1534:-109.394,0,-137.73	0/1:221:115,106:115:4104:106:3775:-273.42,0,-303.019	0/1:68:43,25:43:1544:25:896:-60.4903,0,-118.783	1/1:193:0,193:0:0:193:6924:-623.222,-58.0988,0	1/1:100:1,99:1:36:99:3516:-313.051,-26.5047,0
chr06	24103792	.	ACA	CCG,TCG	234834	PASS	AB=0.456598,0.540833;ABP=92.1682,81.9249;AC=142,46;AF=0.755319,0.244681;AN=188;AO=8225,2967;CIGAR=1X1M1X,1X1M1X;DP=11235;DPB=11236;DPRA=0,1.24612;EPP=17828.6,6445.77;EPPR=0;GTI=0;LEN=3,3;MEANALT=2.02128,2.38596;MQM=59.8736,59.1234;MQMR=0;NS=94;NUMALT=2;ODDS=1.50377;PAIRED=0,0;PAIREDR=0;PAO=1.5,1.5;PQA=54,54;PQR=0;PRO=0;QA=287958,104559;QR=0;RO=0;RPL=0,0;RPP=17863.4,6445.77;RPPR=0;RPR=8225,2967;RUN=1,1;SAF=8221,2967;SAP=17828.6,6445.77;SAR=4,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:79:0,35,44:0:0:35,44:1220,1551:-225.849,-126.632,-116.096,-99.5669,0,-86.3216	1/2:215:0,74,141:0:0:74,141:2604,4985:-617.912,-405.931,-383.655,-212.333,0,-169.888	1/2:99:0,46,52:0:0:46,52:1598,1796:-275.784,-145.874,-132.027,-129.897,0,-114.244	1/1:182:0,182,0:0:0:182,0:6372,0:-573.571,-54.7875,0,-573.571,-54.7875,-573.571	1/1:109:0,108,0:0:0:108,0:3785,0:-340.492,-32.5112,0,-340.492,-32.5112,-340.492	1/1:74:0,74,0:0:0:74,0:2591,0:-233.44,-22.2762,0,-233.44,-22.2762,-233.44	1/1:101:0,99,1:0:0:99,1:3475,36:-312.606,-29.802,0,-309.669,-26.8646,-309.368	1/2:276:0,114,161:0:0:114,161:3992,5698:-788.124,-463.349,-429.031,-324.856,0,-276.39	1/2:146:0,61,85:0:0:61,85:2155,2974:-417.701,-242.198,-223.835,-175.855,0,-150.267	1/2:136:0,72,63:0:0:72,63:2514,2248:-387.728,-183.244,-161.57,-204.477,0,-185.513	1/2:66:0,34,31:0:0:34,31:1183,1101:-185.917,-89.7297,-79.4947,-96.2558,0,-86.9239	1/1:74:0,74,0:0:0:74,0:2594,0:-233.707,-22.2762,0,-233.707,-22.2762,-233.707	1/2:77:0,32,45:0:0:32,45:1138,1568:-220.571,-127.827,-118.194,-93.0964,0,-79.55	1/2:94:0,37,57:0:0:37,57:1267,2039:-268.996,-166.157,-155.019,-103.187,0,-86.0286	1/1:67:0,67,0:0:0:67,0:2368,0:-213.38,-20.169,0,-213.38,-20.169,-213.38	1/2:80:0,42,38:0:0:42,38:1479,1348:-230.578,-110.172,-97.5284,-120.759,0,-109.32	1/2:109:0,55,54:0:0:55,54:1932,1918:-313.712,-156.466,-139.909,-157.599,0,-141.344	1/1:53:0,53,0:0:0:53,0:1842,0:-166.056,-15.9546,0,-166.056,-15.9546,-166.056	1/1:48:0,48,0:0:0:48,0:1697,0:-153.015,-14.4494,0,-153.015,-14.4494,-153.015	1/2:193:0,93,100:0:0:93,100:3236,3520:-549.914,-286.796,-258.8,-263.468,0,-233.365	1/2:252:0,119,132:0:0:119,132:4176,4635:-716.135,-376.968,-341.145,-339.158,0,-299.422	1/1:116:0,114,0:0:0:114,0:4028,0:-362.338,-34.3174,0,-362.338,-34.3174,-362.338	1/2:131:0,62,67:0:0:62,67:2176,2362:-368.938,-191.847,-173.184,-177.082,0,-156.913	1/2:251:0,136,114:0:0:136,114:4724,4023:-711.008,-326.977,-286.037,-384.179,0,-349.862	1/2:89:0,33,56:0:0:33,56:1168,1946:-253.621,-158.479,-148.545,-95.493,0,-78.6353	1/1:348:0,345,1:0:0:345,1:12078,36:-1086.38,-103.855,0,-1083.44,-100.91,-1083.14	1/1:265:0,264,0:0:0:264,0:9244,0:-831.479,-79.4719,0,-831.479,-79.4719,-831.479	1/1:35:0,35,0:0:0:35,0:1235,0:-111.454,-10.5361,0,-111.454,-10.5361,-111.454	1/2:198:0,93,105:0:0:93,105:3248,3725:-567.822,-303.643,-275.647,-264.472,0,-232.863	1/2:145:0,83,61:0:0:83,61:2884,2177:-411.933,-177.474,-152.488,-234.453,0,-216.09	1/2:112:0,61,51:0:0:61,51:2100,1792:-316.678,-146.122,-127.76,-170.904,0,-155.551	1/1:42:0,42,0:0:0:42,0:1488,0:-134.213,-12.6433,0,-134.213,-12.6433,-134.213	1/1:41:0,41,0:0:0:41,0:1416,0:-127.726,-12.3422,0,-127.726,-12.3422,-127.726	1/1:22:0,21,1:0:0:21,1:715,34:-64.3053,-6.32163,0,-61.5473,-3.22375,-61.2463	1/1:44:0,41,0:0:0:41,0:1460,0:-131.337,-12.3422,0,-131.337,-12.3422,-131.337	1/1:12:0,12,0:0:0:12,0:427,0:-38.7681,-3.61236,0,-38.7681,-3.61236,-38.7681	1/2:260:0,86,173:0:0:86,173:2996,6081:-738.325,-494.691,-468.803,-243.623,0,-191.545	1/1:252:0,251,0:0:0:251,0:8823,0:-792.703,-75.5585,0,-792.703,-75.5585,-792.703	1/2:93:0,45,48:0:0:45,48:1582,1720:-269.399,-140.631,-127.084,-129.123,0,-114.674	1/2:6:0,5,1:0:0:5,1:148,36:-15.0552,-3.29724,-1.79209,-12.1072,0,-11.8061	1/1:162:0,162,0:0:0:162,0:5645,0:-508.151,-48.7669,0,-508.151,-48.7669,-508.151	1/1:51:0,50,0:0:0:50,0:1746,0:-157.07,-15.0515,0,-157.07,-15.0515,-157.07	1/2:214:0,73,141:0:0:73,141:2575,4941:-611.938,-402.293,-380.318,-209.997,0,-167.552	1/2:164:0,81,82:0:0:81,82:2880,2926:-473.141,-238.443,-214.06,-234.694,0,-210.01	1/2:92:0,49,43:0:0:49,43:1712,1532:-264.457,-125.222,-110.471,-139.589,0,-126.644	1/1:137:0,136,0:0:0:136,0:4724,0:-424.929,-40.9401,0,-424.929,-40.9401,-424.929	1/2:98:0,41,57:0:0:41,57:1437,2004:-279.914,-162.984,-150.641,-117.281,0,-100.122	1/1:214:0,211,2:0:0:211,2:7423,72:-667.382,-63.5173,0,-661.507,-57.6425,-660.905	1/1:191:0,189,2:0:0:189,2:6612,70:-594.792,-56.8947,0,-589.096,-50.8494,-588.494	1/2:119:0,50,69:0:0:50,69:1762,2424:-340.941,-197.482,-182.43,-143.752,0,-122.981	1/1:204:0,202,0:0:0:202,0:7145,0:-642.645,-60.8081,0,-642.645,-60.8081,-642.645	1/2:15:0,10,5:0:0:10,5:352,165:-42.3377,-13.6675,-10.6572,-29.0073,0,-27.5022	1/1:72:0,72,0:0:0:72,0:2530,0:-227.951,-21.6742,0,-227.951,-21.6742,-227.951	1/2:28:0,6,22:0:0:6,22:204,785:-80.8925,-64.3494,-62.5432,-16.8865,0,-10.2638	1/2:6:0,4,2:0:0:4,2:142,72:-17.8016,-6.23466,-5.03054,-11.9251,0,-11.323	1/2:112:0,39,72:0:0:39,72:1354,2535:-316.354,-206.376,-1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chr06	24103825	.	C	T	49814.1	PASS	AB=0.540814;ABP=80.1161;AC=46;AF=0.244681;AN=188;AO=2909;CIGAR=1X;DP=10996;DPB=10996;DPRA=1.19343;EPP=6302.46;EPPR=17487.8;GTI=0;LEN=1;MEANALT=1.0678;MQM=59.1605;MQMR=59.9144;NS=94;NUMALT=1;ODDS=1.87693;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=103716;QR=286250;RO=8080;RPL=2907;RPP=6302.46;RPPR=17531.1;RPR=2;RUN=1;SAF=2909;SAP=6319.82;SAR=0;SRF=8075;SRP=17505.1;SRR=5;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:74:34,40:34:1220:40:1432:-106.873,0,-87.8306	0/1:207:73,134:73:2596:134:4798:-368.876,0,-171.574	0/1:97:46,51:46:1644:51:1832:-135.887,0,-119.048	0/0:178:178,0:178:6309:0:0:0,-53.5833,-567.892	0/0:111:111,0:111:3947:0:0:0,-33.4143,-355.421	0/0:74:73,1:73:2602:1:36:0,-18.6779,-230.829	0/0:96:95,1:95:3381:1:36:0,-25.3006,-300.907	0/1:268:111,156:111:3911:156:5547:-418.176,0,-271.42	0/1:140:57,83:57:2005:83:2971:-225.31,0,-138.575	0/1:133:70,63:70:2478:63:2244:-162.156,0,-183.236	0/1:66:35,31:35:1229:31:1091:-78.5986,0,-90.999	0/0:71:71,0:71:2537:0:0:0,-21.3731,-228.579	0/1:76:34,42:34:1200:42:1512:-113.456,0,-85.4246	0/1:94:38,56:38:1329:56:1982:-149.938,0,-91.6109	0/0:67:67,0:67:2369:0:0:0,-20.169,-213.467	0/1:78:41,37:41:1431:37:1306:-94.3511,0,-105.602	0/1:110:54,56:54:1873:56:1972:-144.471,0,-135.729	0/0:53:53,0:53:1849:0:0:0,-15.9546,-166.685	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:191:94,97:94:3347:97:3480:-255.786,0,-243.951	0/1:245:115,130:115:4110:130:4619:-341.975,0,-295.194	0/0:112:112,0:112:3933:0:0:0,-33.7154,-354.157	0/1:130:62,68:62:2183:68:2432:-179.488,0,-157.597	0/1:247:137,110:137:4864:110:3886:-274.994,0,-363.561	0/1:87:33,54:33:1152:54:1927:-147.417,0,-77.7938	0/0:338:331,6:331:11766:6:216:0,-82.0164,-1038.58	0/0:258:258,0:258:9169:0:0:0,-77.6657,-825.123	0/0:35:35,0:35:1234:0:0:0,-10.536,-111.363	0/1:192:91,101:91:3220:101:3610:-267.161,0,-232.197	0/1:140:83,57:83:2963:57:2018:-139.745,0,-224.759	0/1:109:58,51:58:2049:51:1820:-131.183,0,-151.866	0/0:42:41,0:41:1472:0:0:0,-12.3422,-132.416	0/0:41:41,0:41:1444:0:0:0,-12.3422,-130.225	0/0:21:20,1:20:708:1:36:0,-2.72335,-60.3902	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:258:85,173:85:2983:173:6162:-476.774,0,-191.034	0/0:242:242,0:242:8544:0:0:0,-72.8493,-768.955	0/1:92:44,48:44:1562:48:1720:-127.384,0,-113.175	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/0:160:160,0:160:5694:0:0:0,-48.1648,-512.576	0/0:51:50,1:50:1796:1:36:0,-11.7543,-158.238	0/1:211:72,139:72:2553:139:4949:-381.937,0,-166.474	0/1:163:81,82:81:2871:82:2930:-214.66,0,-209.558	0/1:88:46,42:46:1611:42:1487:-107.602,0,-118.785	0/0:135:134,0:134:4779:0:0:0,-40.338,-429.777	0/1:96:41,55:41:1468:55:1953:-146.567,0,-103.515	0/0:209:207,2:207:7314:2:72:0,-56.0785,-651.464	0/0:182:181,1:181:6444:1:36:0,-51.1892,-576.439	0/1:119:49,70:49:1730:70:2505:-189.748,0,-120.161	0/0:198:197,0:197:7021:0:0:0,-59.3029,-631.461	0/1:14:9,5:9:324:5:176:-11.9588,0,-25.2914	0/0:71:71,0:71:2521:0:0:0,-21.3731,-227.138	0/1:27:5,22:5:176:22:792:-63.4755,0,-8.05721	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:110:39,71:39:1382:71:2514:-193.369,0,-91.0732	0/0:50:50,0:50:1759:0:0:0,-15.0515,-158.59	0/0:6:6,0:6:207:0:0:0,-1.80618,-18.9669	0/0:49:49,0:49:1737:0:0:0,-14.7505,-156.613	0/1:99:39,59:39:1392:59:2097:-159.135,0,-95.7183	0/0:122:120,2:120:4257:2:72:0,-29.8889,-376.474	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	0/0:148:148,0:148:5277:0:0:0,-44.5524,-475.066	0/0:255:248,7:248:8753:7:252:0,-53.7625,-764.748	0/1:94:59,35:59:2099:35:1256:-84.2133,0,-160.876	0/0:54:54,0:54:1932:0:0:0,-16.2556,-173.786	0/0:189:187,2:187:6622:2:72:0,-50.0579,-589.212	0/0:80:80,0:80:2833:0:0:0,-24.0824,-255.206	0/0:38:38,0:38:1319:0:0:0,-11.4391,-119.006	0/0:113:112,1:112:3964:1:36:0,-30.4181,-353.284	0/0:66:66,0:66:2308:0:0:0,-19.868,-207.977	0/1:16:12,4:12:432:4:144:-8.49714,0,-34.4047	0/1:71:41,30:41:1440:30:1076:-75.6432,0,-108.52	0/1:63:26,37:26:927:37:1319:-99.0712,0,-64.7825	0/1:308:125,183:125:4416:183:6554:-495.847,0,-304.896	0/0:230:230,0:230:8157:0:0:0,-69.2369,-734.102	0/0:184:183,1:183:6497:1:36:0,-51.7912,-581.19	0/0:182:181,1:181:6399:1:36:0,-51.1892,-572.402	0/1:9:4,5:4:144:5:180:-13.1278,0,-10.6043	0/0:228:228,0:228:8099:0:0:0,-68.6348,-728.916	0/0:123:123,0:123:4320:0:0:0,-37.0267,-388.977	0/0:272:272,0:272:9677:0:0:0,-81.8802,-870.828	0/1:158:82,76:82:2893:76:2718:-197.297,0,-213.042	0/0:57:57,0:57:2011:0:0:0,-17.1587,-181.26	0/1:131:70,60:70:2486:60:2148:-154.002,0,-184.499	0/1:201:94,107:94:3321:107:3811:-282.439,0,-238.6	0/1:48:29,19:29:1036:19:684:-47.4124,0,-79.0752	0/0:81:81,0:81:2857:0:0:0,-24.3834,-257.365	0/0:79:79,0:79:2798:0:0:0,-23.7814,-252.058	0/1:39:17,22:17:608:22:784:-59.1153,0,-43.3119	0/1:107:57,50:57:1964:50:1787:-128.84,0,-144.818	0/1:104:38,66:38:1346:66:2339:-179.344,0,-90.1316	0/0:66:66,0:66:2299:0:0:0,-19.868,-207.17	0/0:148:148,0:148:5203:0:0:0,-44.5524,-467.392
chr06	25625972	.	T	G	144841	PASS	AB=0.495345;ABP=4.00093;AC=138;AF=0.734043;AN=188;AO=6970;CIGAR=1X;DP=9636;DPB=9636;DPRA=0;EPP=15138.2;EPPR=5783.47;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.9858;MQMR=59.9816;NS=94;NUMALT=1;ODDS=5.80601;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=249269;QR=95254;RO=2662;RPL=6970;RPP=15138.2;RPPR=5783.47;RPR=0;RUN=1;SAF=0;SAP=15138.2;SAR=6970;SRF=0;SRP=5783.47;SRR=2662;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:78:35,43:35:1260:43:1529:-114.422,0,-90.2251	0/1:79:34,45:34:1209:45:1588:-119.429,0,-85.3328	0/1:152:96,56:96:3452:56:2004:-134.877,0,-265.135	1/1:189:0,189:0:0:189:6772:-609.552,-56.8947,0	1/1:68:1,67:1:36:67:2384:-211.22,-16.8718,0	1/1:71:0,71:0:0:71:2536:-228.491,-21.3731,0	1/1:78:0,78:0:0:78:2800:-252.24,-23.4803,0	0/1:141:75,66:75:2692:66:2368:-170.933,0,-200.079	0/1:157:72,85:72:2592:85:3008:-223.689,0,-186.266	0/1:83:43,40:43:1544:40:1432:-104.192,0,-114.268	0/1:138:88,50:88:3115:50:1792:-120.02,0,-239.031	1/1:108:0,108:0:0:108:3872:-348.674,-32.5112,0	0/1:108:52,56:52:1864:56:1991:-146.952,0,-135.528	0/1:142:67,74:67:2404:74:2652:-196.121,0,-173.811	1/1:68:0,68:0:0:68:2428:-218.776,-20.47,0	1/1:85:0,85:0:0:85:3032:-273.109,-25.5876,0	0/1:81:47,34:47:1677:34:1220:-85.7234,0,-126.832	1/1:63:0,63:0:0:63:2260:-203.663,-18.9649,0	0/1:59:38,21:38:1353:21:756:-50.6065,0,-104.308	0/1:124:69,55:69:2472:55:1976:-140.787,0,-185.406	0/1:173:71,102:71:2548:102:3622:-274.11,0,-177.489	1/1:87:0,87:0:0:87:3108:-279.948,-26.1896,0	0/1:170:85,85:85:3044:85:3056:-224.093,0,-223.015	0/1:109:12,97:12:432:97:3449:-277.811,0,-6.40893	0/1:117:63,54:63:2249:54:1936:-139.296,0,-167.451	1/1:241:1,240:1:36:240:8616:-771.834,-68.95,0	0/1:204:113,91:113:4064:91:3246:-230.952,0,-304.535	0/1:31:14,17:14:504:17:608:-45.7201,0,-36.3662	0/1:274:136,138:136:4873:138:4932:-361.549,0,-356.238	0/1:101:38,63:38:1356:63:2260:-173.259,0,-91.9365	0/1:99:50,48:50:1800:48:1705:-123.873,0,-132.421	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:32:0,32:0:0:32:1144:-103.27,-9.63296,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:19:5,14:5:180:14:504:-39.9785,0,-10.8325	1/1:30:0,30:0:0:30:1058:-95.5301,-9.0309,0	0/1:220:112,108:112:4024:108:3848:-279.801,0,-296.12	1/1:91:0,91:0:0:91:3252:-292.902,-27.3937,0	0/1:108:42,66:42:1508:66:2360:-180.147,0,-103.503	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	0/1:100:55,45:55:1976:45:1616:-115.627,0,-148.012	1/1:55:0,55:0:0:55:1964:-177.035,-16.5567,0	0/1:137:61,76:61:2177:76:2716:-203.443,0,-154.953	0/1:69:29,40:29:1028:40:1420:-107.326,0,-72.062	1/1:69:0,69:0:0:69:2468:-222.374,-20.7711,0	1/1:112:0,112:0:0:112:4014:-361.448,-33.7154,0	0/1:105:54,51:54:1928:51:1828:-133.193,0,-142.189	1/1:112:0,112:0:0:112:4020:-361.988,-33.7154,0	1/1:77:0,77:0:0:77:2760:-248.642,-23.1793,0	0/1:114:68,45:68:2414:45:1612:-110.994,0,-183.137	1/1:92:0,92:0:0:92:3284:-295.78,-27.6948,0	0/1:14:9,5:9:324:5:180:-12.3376,0,-23.7364	1/1:99:0,99:0:0:99:3540:-318.809,-29.802,0	0/1:97:51,46:51:1832:46:1640:-118.689,0,-135.961	0/1:17:10,7:10:360:7:252:-17.9114,0,-27.6268	0/1:111:44,67:44:1584:67:2404:-183.202,0,-109.437	1/1:48:0,48:0:0:48:1704:-153.646,-14.4494,0	0/1:21:9,12:9:324:12:432:-32.8996,0,-23.1842	1/1:18:0,18:0:0:18:628:-56.8455,-5.41854,0	0/1:157:84,73:84:2986:73:2616:-188.426,0,-221.708	1/1:118:1,117:1:36:117:4192:-373.863,-31.9233,0	0/1:17:12,5:12:424:5:176:-11.0675,0,-33.3789	1/1:132:0,132:0:0:132:4744:-427.116,-39.736,0	1/1:188:2,186:2:72:186:6652:-591.836,-49.7569,0	0/1:122:47,75:47:1680:75:2684:-205.079,0,-114.761	0/1:54:21,33:21:752:33:1188:-90.973,0,-51.7506	1/1:201:0,201:0:0:201:7197:-647.785,-60.507,0	1/1:145:3,142:3:93:142:5088:-449.386,-34.9726,0	1/1:81:1,80:1:36:80:2850:-253.14,-20.7852,0	1/1:78:0,78:0:0:78:2792:-251.52,-23.4803,0	1/1:60:0,60:0:0:60:2132:-192.147,-18.0618,0	0/1:30:15,15:15:540:15:540:-39.9056,0,-39.9056	1/1:75:0,75:0:0:75:2680:-241.445,-22.5773,0	0/1:106:51,55:51:1816:55:1943:-143.236,0,-131.812	0/1:256:124,132:124:4440:132:4720:-347.893,0,-322.707	1/1:161:0,161:0:0:161:5772:-519.594,-48.4658,0	1/1:148:0,148:0:0:148:5283:-475.608,-44.5524,0	1/1:94:0,94:0:0:94:3360:-302.617,-28.2968,0	0/1:38:19,19:19:684:19:684:-50.4512,0,-50.4512	1/1:116:0,116:0:0:116:4156:-374.223,-34.9195,0	1/1:122:0,122:0:0:122:4356:-392.216,-36.7257,0	1/1:178:0,177:0:0:177:6328:-569.253,-53.2823,0	0/1:79:44,35:44:1584:35:1252:-89.2037,0,-119.07	1/1:106:0,106:0:0:106:3812:-343.276,-31.9092,0	0/1:55:27,28:27:957:28:1008:-73.8513,0,-69.8872	0/1:143:75,68:75:2692:68:2444:-177.167,0,-199.477	0/1:21:12,9:12:432:9:320:-22.8207,0,-32.8996	1/1:92:0,92:0:0:92:3296:-296.859,-27.6948,0	1/1:92:0,92:0:0:92:3308:-297.937,-27.6948,0	0/1:115:64,51:64:2239:51:1816:-129.103,0,-167.151	0/1:214:137,77:137:4904:77:2756:-183.862,0,-377.091	0/1:94:66,28:66:2364:28:988:-60.9371,0,-184.722	1/1:140:0,140:0:0:140:5006:-450.686,-42.1442,0	1/1:132:0,132:0:0:132:4716:-424.601,-39.736,0
chr06	28612075	.	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chr06	28612080	.	AA	GG	245254	PASS	AB=0.516475;ABP=17.7494;AC=139;AF=0.739362;AN=188;AO=9418;CIGAR=2X;DP=12478;DPB=12481.5;DPRA=0;EPP=20453.9;EPPR=6576.06;GTI=1;LEN=2;MEANALT=1.28723;MQM=59.1752;MQMR=59.7496;NS=94;NUMALT=1;ODDS=3.83418;PAIRED=0;PAIREDR=0;PAO=7;PQA=248;PQR=0;PRO=0;QA=327027;QR=105948;RO=3031;RPL=4211;RPP=231.736;RPPR=8.94298;RPR=5207;RUN=1;SAF=4211;SAP=231.736;SAR=5207;SRF=1469;SRP=9.20663;SRR=1562;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:23,39:23:789:39:1355:-103.556,0,-52.6602	0/1:144:67,77:67:2298:77:2629:-193.399,0,-163.711	0/1:230:111,118:111:3924:118:4126:-302.119,0,-284.039	1/1:220:1,219:1:36:219:7608:-679.944,-62.6283,0	1/1:88:0,88:0:0:88:3043:-273.966,-26.4906,0	1/1:59:0,59:0:0:59:2044:-183.903,-17.7608,0	1/1:82:0,82:0:0:82:2826:-254.577,-24.6845,0	0/1:215:82,132:82:2885:132:4618:-350.987,0,-195.215	0/1:121:53,68:53:1827:68:2338:-174.227,0,-128.252	0/1:153:97,56:97:3407:56:1975:-131.966,0,-260.761	0/1:132:70,62:70:2485:62:2138:-152.848,0,-184.163	1/1:156:0,156:0:0:156:5405:-486.205,-46.9607,0	0/1:145:80,65:80:2773:65:2232:-157.472,0,-206.156	0/1:134:64,69:64:2230:69:2344:-170.711,0,-160.652	1/1:111:0,111:0:0:111:3866:-347.992,-33.4143,0	1/1:108:0,108:0:0:108:3750:-337.391,-32.5112,0	0/1:93:50,42:50:1761:42:1458:-103.567,0,-130.811	1/1:86:0,86:0:0:86:2949:-265.568,-25.8886,0	0/1:74:43,31:43:1498:31:1096:-76.6266,0,-112.815	0/1:234:113,121:113:3946:121:4229:-309.725,0,-284.866	0/1:178:97,81:97:3394:81:2758:-194.829,0,-252.097	1/1:90:0,90:0:0:90:3115:-280.28,-27.0927,0	0/1:68:36,32:36:1268:32:1133:-81.763,0,-93.9383	1/1:150:11,139:11:387:139:4824:-399.148,-9.9881,0	0/1:83:37,46:37:1278:46:1621:-121.19,0,-90.3309	1/1:298:0,296:0:0:296:10308:-927.329,-89.1049,0	0/1:330:153,177:153:5344:177:6157:-454.732,0,-381.742	0/1:65:32,33:32:1125:33:1135:-82.7903,0,-81.9903	0/1:297:163,134:163:5642:134:4615:-325.69,0,-418.489	0/1:150:62,87:62:2188:87:3031:-227.831,0,-152.082	0/1:93:49,44:49:1726:44:1570:-113.596,0,-127.46	1/1:5:0,5:0:0:5:164:-15.0355,-1.50515,0	1/1:12:0,12:0:0:12:408:-37.0455,-3.61236,0	1/1:6:0,6:0:0:6:203:-18.5965,-1.80618,0	0/1:10:7,3:7:233:3:108:-7.06205,0,-18.2486	1/1:32:0,32:0:0:32:1122:-101.222,-9.63296,0	0/1:319:141,178:141:4902:178:6213:-463.223,0,-345.315	1/1:169:0,168:0:0:168:5812:-522.793,-50.573,0	0/1:98:45,53:45:1592:53:1797:-132.056,0,-114.016	0/1:9:4,5:4:131:5:180:-13.8428,0,-9.4039	0/1:302:141,160:141:4970:160:5544:-408.028,0,-356.441	1/1:74:0,73:0:0:73:2535:-228.075,-21.9752,0	0/1:182:69,113:69:2436:113:3971:-302.706,0,-164.7	0/1:105:51,54:51:1775:54:1890:-138.447,0,-128.1	1/1:106:0,105:0:0:105:3638:-327.145,-31.6082,0	1/1:129:1,128:1:36:128:4467:-398.512,-35.2346,0	0/1:153:79,74:79:2730:74:2595:-187.572,0,-199.883	1/1:163:0,162:0:0:162:5638:-506.602,-48.7669,0	1/1:143:1,142:1:25:142:4959:-443.928,-40.5474,0	0/1:204:95,109:95:3329:109:3834:-283.76,0,-238.41	1/1:141:0,140:0:0:140:4894:-440.232,-42.1442,0	0/1:15:8,7:8:288:7:250:-18.3025,0,-21.752	1/1:292:0,292:0:0:292:10184:-915.452,-87.9008,0	0/1:58:27,31:27:954:31:1103:-82.0921,0,-68.7116	0/1:17:13,4:13:455:4:139:-7.66323,0,-36.145	0/1:165:73,91:73:2500:91:3066:-226.323,0,-175.543	1/1:38:1,36:1:36:36:1241:-108.388,-7.89966,0	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:37:0,37:0:0:37:1300:-117.268,-11.1381,0	0/1:108:49,57:49:1718:57:1960:-144.273,0,-122.527	1/1:162:1,161:1:34:161:5618:-502.253,-45.3679,0	0/1:11:1,10:1:34:10:350:-28.5249,0,-0.0875809	1/1:244:1,243:1:36:243:8426:-754.723,-69.853,0	1/1:198:2,196:2:72:196:6812:-606.223,-52.7672,0	0/1:118:37,81:37:1241:81:2841:-220.36,0,-76.4597	0/1:127:48,79:48:1672:79:2700:-204.841,0,-112.519	1/1:122:0,122:0:0:122:4134:-372.185,-36.7257,0	1/1:186:1,185:1:34:185:6445:-576.609,-52.5927,0	1/1:109:1,108:1:36:108:3776:-336.332,-29.214,0	1/1:91:0,91:0:0:91:3198:-287.929,-27.3937,0	1/1:134:0,134:0:0:134:4609:-414.968,-40.338,0	0/1:49:24,25:24:824:25:836:-60.7497,0,-59.7214	1/1:145:0,145:0:0:145:5036:-452.487,-43.6494,0	0/1:148:81,66:81:2859:66:2283:-161.063,0,-212.2	0/1:159:58,101:58:2024:101:3552:-271.949,0,-134.426	1/1:187:0,186:0:0:186:6478:-582.663,-55.9916,0	1/1:226:0,224:0:0:224:7788:-700.206,-67.4307,0	1/1:204:0,204:0:0:204:7078:-636.634,-61.4101,0	0/1:19:12,7:12:425:7:226:-14.8626,0,-32.8674	1/1:191:0,191:0:0:191:6581:-592.347,-57.4967,0	1/1:212:0,212:0:0:212:7330:-659.293,-63.8184,0	1/1:327:0,326:0:0:326:11415:-1024.79,-98.1358,0	0/1:127:72,55:72:2550:55:1914:-134.275,0,-191.516	1/1:138:0,136:0:0:136:4738:-426.289,-40.9401,0	0/1:118:70,48:70:2474:48:1665:-114.585,0,-187.395	0/1:206:103,102:103:3589:102:3480:-251.259,0,-261.147	0/1:49:25,24:25:883:24:844:-61.5217,0,-64.2576	1/1:97:0,97:0:0:97:3390:-305.066,-29.1999,0	1/1:137:0,137:0:0:137:4787:-430.718,-41.2411,0	0/1:82:41,41:41:1456:41:1413:-102.506,0,-106.631	0/1:194:90,104:90:3138:104:3587:-264.457,0,-224.224	0/1:93:61,29:61:2138:29:1010:-63.7081,0,-165.235	1/1:137:0,137:0:0:137:4780:-430.239,-41.2411,0	1/1:184:1,182:1:36:182:6252:-558.739,-51.7951,0
chr06	28612091	.	ATATAG	AATAG	22897.7	PASS	AB=0.443261;ABP=94.9223;AC=47;AF=0.25;AN=188;AO=1466;CIGAR=1M1D4M;DP=6783;DPB=6536.67;DPRA=0.939675;EPP=3186.39;EPPR=10542.2;GTI=1;LEN=1;MEANALT=1.25926;MQM=59.6378;MQMR=58.5544;NS=94;NUMALT=1;ODDS=2.55166;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=52087;QR=186300;RO=5292;RPL=1466;RPP=3186.39;RPPR=10533.9;RPR=0;RUN=1;SAF=0;SAP=3186.39;SAR=1466;SRF=1;SRP=11485.8;SRR=5291;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:30,10:30:1058:10:360:-20.7031,0,-83.4545	0/1:64:37,27:37:1303:27:956:-67.0722,0,-98.1984	0/1:136:69,67:69:2426:67:2391:-174.486,0,-177.535	0/0:111:110,1:110:3871:1:36:0,-29.8161,-343.554	0/0:40:40,0:40:1384:0:0:0,-12.0412,-124.666	0/0:33:32,1:32:1133:1:32:0,-6.85325,-99.102	0/0:55:55,0:55:1937:0:0:0,-16.5566,-174.607	0/1:113:84,29:84:2948:29:1024:-58.4562,0,-231.297	0/1:52:26,26:26:914:26:920:-67.4387,0,-66.8993	0/1:69:24,44:24:837:44:1556:-119.48,0,-54.8184	0/1:94:41,52:41:1439:52:1855:-138.873,0,-101.426	0/0:98:98,0:98:3428:0:0:0,-29.5009,-307.631	0/1:56:27,29:27:960:29:1028:-75.9692,0,-69.8352	0/1:89:50,37:50:1758:37:1312:-91.8556,0,-131.867	0/0:54:54,0:54:1929:0:0:0,-16.2556,-173.727	0/0:79:79,0:79:2799:0:0:0,-23.7814,-251.781	0/1:38:17,21:17:589:21:734:-54.8877,0,-41.8823	0/0:37:37,0:37:1304:0:0:0,-11.1381,-117.565	0/1:46:20,26:20:711:26:928:-69.9732,0,-50.4248	0/1:115:59,56:59:2061:56:2000:-145.459,0,-150.422	0/1:68:45,23:45:1577:23:812:-52.9309,0,-121.69	0/0:32:32,0:32:1124:0:0:0,-9.63296,-101.433	0/1:43:17,26:17:599:26:928:-70.8853,0,-41.2496	0/0:31:29,2:29:1024:2:72:0,-2.49521,-85.6316	0/1:47:28,19:28:985:19:680:-47.3808,0,-74.8133	0/0:149:148,0:148:5208:0:0:0,-44.5524,-468.329	0/1:174:99,74:99:3481:74:2610:-182.774,0,-260.822	0/1:28:16,12:16:570:12:432:-30.7359,0,-43.091	0/1:163:79,84:79:2764:84:2984:-219.71,0,-199.372	0/1:81:52,29:52:1825:29:1032:-68.81,0,-140.078	0/1:56:34,15:34:1207:15:540:-33.8287,0,-93.8306	0/0:4:4,0:4:143:0:0:0,-1.20412,-12.8954	0/0:7:7,0:7:246:0:0:0,-2.10721,-22.4819	0/0:6:6,0:6:213:0:0:0,-1.80618,-19.5115	0/1:10:3,7:3:107:7:248:-19.6182,0,-6.96924	0/0:28:28,0:28:962:0:0:0,-8.42884,-86.8024	0/1:119:70,49:70:2486:49:1741:-121.15,0,-188.154	0/0:60:60,0:60:2121:0:0:0,-18.0618,-191.001	0/1:66:35,30:35:1218:30:1072:-76.8318,0,-89.3439	0/0:4:4,0:4:132:0:0:0,-1.20412,-12.2059	0/1:184:103,81:103:3634:81:2896:-205.443,0,-271.805	0/0:46:46,0:46:1616:0:0:0,-13.8474,-145.635	0/1:79:46,32:46:1626:32:1140:-79.0649,0,-122.7	0/1:40:20,20:20:698:20:712:-52.3639,0,-51.1013	0/0:44:44,0:44:1545:0:0:0,-13.2453,-139.199	0/0:84:84,0:84:2976:0:0:0,-25.2865,-267.959	0/1:72:38,34:38:1357:34:1220:-88.4326,0,-100.586	0/0:109:109,0:109:3837:0:0:0,-32.8123,-344.975	0/0:55:55,0:55:1945:0:0:0,-16.5566,-175.287	0/1:108:55,53:55:1946:53:1851:-134.342,0,-142.822	0/0:75:74,0:74:2634:0:0:0,-22.2762,-236.928	0/1:13:7,6:7:249:6:216:-15.8771,0,-18.8274	0/0:231:231,0:231:8175:0:0:0,-69.5379,-734.578	0/1:54:29,24:29:1028:24:837:-59.4734,0,-76.6366	0/1:8:1,7:1:35:7:252:-20.6029,0,-1.02789	0/1:109:71,38:71:2484:38:1339:-87.9962,0,-190.865	0/0:16:15,1:15:529:1:36:0,-1.2182,-44.3438	0/1:7:5,2:5:174:2:68:-4.3505,0,-13.8943	0/0:31:31,0:31:1088:0:0:0,-9.33193,-98.2172	0/1:75:42,33:42:1457:33:1176:-83.4126,0,-108.728	0/0:97:96,1:96:3403:1:36:0,-25.6016,-302.766	0/0:8:8,0:8:279:0:0:0,-2.40824,-25.4478	0/0:124:124,0:124:4354:0:0:0,-37.3277,-391.984	0/0:121:119,2:119:4201:2:72:0,-29.5879,-371.181	0/1:60:42,18:42:1472:18:629:-38.872,0,-114.681	0/1:76:55,21:55:1935:21:749:-44.8418,0,-151.376	0/0:54:54,0:54:1881:0:0:0,-16.2556,-169.332	0/0:139:139,0:139:4919:0:0:0,-41.8432,-442.747	0/0:97:95,1:95:3359:1:36:0,-25.6579,-298.819	0/0:29:29,0:29:1023:0:0:0,-8.72987,-92.2813	0/0:52:52,0:52:1831:0:0:0,-15.6536,-165.069	0/1:37:21,16:21:739:16:553:-38.9559,0,-55.6769	0/0:113:113,0:113:3973:0:0:0,-34.0164,-357.248	0/1:73:36,37:36:1276:37:1328:-97.8466,0,-93.069	0/1:104:65,38:65:2281:38:1344:-89.6164,0,-174.121	0/0:95:95,0:95:3376:0:0:0,-28.5978,-303.912	0/0:172:172,0:172:6032:0:0:0,-51.7772,-542.1	0/0:121:121,0:121:4270:0:0:0,-36.4246,-384.378	0/1:16:7,9:7:241:9:324:-24.6894,0,-17.1327	0/0:103:103,0:103:3596:0:0:0,-31.0061,-323.8	0/0:113:113,0:113:3919:0:0:0,-34.0164,-352.398	0/0:163:160,0:160:5627:0:0:0,-48.1648,-505.058	0/1:32:16,16:16:573:16:576:-42.5358,0,-42.2065	0/0:72:72,0:72:2547:0:0:0,-21.6742,-229.408	0/1:28:11,17:11:393:17:608:-46.6232,0,-27.2535	0/1:69:37,31:37:1319:31:1108:-79.2043,0,-98.1282	0/1:14:7,7:7:252:7:248:-18.4498,0,-18.8066	0/0:49:49,0:49:1732:0:0:0,-14.7505,-155.561	0/0:76:76,0:76:2669:0:0:0,-22.8783,-240.268	0/1:63:33,30:33:1161:30:1072:-77.8126,0,-85.5738	0/1:152:87,64:87:3075:64:2266:-158.36,0,-230.97	0/1:47:15,31:15:533:31:1112:-86.1748,0,-34.0677	0/0:95:95,0:95:3285:0:0:0,-28.5978,-295.772	0/0:84:84,0:84:2960:0:0:0,-25.2865,-266.178
chr06	28835999	.	TTT	TTG,CTG	217953	PASS	AB=0.498695,0.497289;ABP=3.08401,3.32824;AC=139,49;AF=0.739362,0.260638;AN=188;AO=7681,2505;CIGAR=2M1X,1X1M1X;DP=10223;DPB=10223;DPRA=0,1.01977;EPP=16647.4,5416.52;EPPR=25.3454;GTI=1;LEN=1,3;MEANALT=1.85106,2.25862;MQM=59.9876,59.9621;MQMR=58;NS=94;NUMALT=2;ODDS=6.70648;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=274061,88126;QR=423;RO=14;RPL=2,3;RPP=16664.7,5416.52;RPPR=25.3454;RPR=7679,2502;RUN=1,1;SAF=2,0;SAP=16664.7,5442.55;SAR=7679,2505;SRF=0;SRP=33.4109;SRR=14;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:89:0,19,67:0:0:19,67:660,2375:-247.207,-193.554,-187.835,-53.7119,0,-33.5429	1/2:183:1,86,96:1:28:86,96:3074,3397:-524.891,-274.547,-250.876,-248.501,0,-221.82	1/2:122:0,65,57:0:0:65,57:2305,2019:-352.612,-164.823,-145.256,-188.143,0,-170.984	1/1:228:0,228,0:0:0:228,0:8160,0:-734.412,-68.6348,0,-734.412,-68.6348,-734.412	1/1:92:0,92,0:0:0:92,0:3266,0:-294.159,-27.6948,0,-294.159,-27.6948,-294.159	1/1:46:1,45,0:1:27:45,0:1594,0:-140.82,-11.1476,0,-141.121,-13.5464,-143.248	1/1:177:0,176,0:0:0:176,0:6271,0:-564.126,-52.9813,0,-564.126,-52.9813,-564.126	1/2:137:0,60,73:0:0:60,73:2148,2524:-380.229,-205.056,-186.994,-175.166,0,-153.191	1/2:125:0,56,69:0:0:56,69:1997,2412:-359.354,-196.563,-179.706,-163.144,0,-142.373	1/2:81:0,42,39:0:0:42,39:1503,1381:-235.413,-112.848,-100.205,-122.921,0,-111.18	1/2:42:0,19,23:0:0:19,23:680,822:-122.831,-67.3794,-61.6598,-55.8096,0,-48.8859	1/1:80:0,80,0:0:0:80,0:2812,0:-253.318,-24.0824,0,-253.318,-24.0824,-253.318	1/2:86:0,40,45:0:0:40,45:1423,1608:-247.071,-131.102,-119.061,-115.966,0,-102.419	1/2:56:0,31,25:0:0:31,25:1116,882:-163.236,-72.1718,-62.8399,-91.4198,0,-83.894	1/1:62:1,60,0:1:36:60,0:2156,0:-190.747,-15.0845,0,-191.048,-18.0618,-193.986	1/2:51:0,25,26:0:0:25,26:896,928:-149.089,-76.0117,-68.4859,-73.4346,0,-65.6078	1/2:39:1,19,19:1:36:19,19:658,667:-104.511,-51.3384,-48.5567,-50.5244,0,-47.743	1/1:51:0,50,0:0:0:50,0:1800,0:-161.922,-15.0515,0,-161.922,-15.0515,-161.922	1/2:44:0,24,20:0:0:24,20:864,698:-127.625,-57.1206,-49.8958,-70.8578,0,-64.8372	1/2:241:0,106,134:0:0:106,134:3808,4751:-697.705,-387.055,-355.146,-310.647,0,-270.309	1/2:153:0,78,74:0:0:78,74:2800,2604:-440.375,-211.971,-188.491,-228.399,0,-206.123	1/1:116:0,116,0:0:0:116,0:4142,0:-372.964,-34.9195,0,-372.964,-34.9195,-372.964	1/2:122:0,76,46:0:0:76,46:2709,1602:-351.441,-130.618,-107.74,-221.174,0,-207.327	1/1:144:1,130,13:1:36:130,13:4630,441:-413.283,-36.195,0,-377.825,-3.39277,-376.849	1/2:140:0,64,75:0:0:64,75:2287,2620:-399.582,-213.111,-193.845,-186.465,0,-163.888	1/1:355:2,353,0:2:48:353,0:12614,0:-1130.53,-102.306,0,-1131.13,-106.264,-1134.85	1/2:288:2,164,122:2:72:164,122:5857,4252:-816.82,-339.902,-296.408,-471.638,0,-440.787	1/2:50:0,22,28:0:0:22,28:788,987:-144.979,-80.7128,-74.0901,-64.6221,0,-56.1933	1/2:327:0,168,159:0:0:168,159:6023,5570:-944.811,-453.565,-402.992,-491.6,0,-443.736	1/2:124:0,68,56:0:0:68,56:2428,1960:-357.768,-159.815,-139.345,-198.306,0,-181.448	1/2:126:0,53,73:0:0:53,73:1908,2588:-366.879,-211.194,-195.239,-156.043,0,-134.068	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:9:0,9,0:0:0:9,0:315,0:-28.6872,-2.70927,0,-28.6872,-2.70927,-28.6872	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/1:12:0,11,1:0:0:11,1:396,36:-35.6229,-3.31133,0,-32.6855,-0.0140851,-32.3845	1/1:18:0,18,0:0:0:18,0:648,0:-58.6519,-5.41854,0,-58.6519,-5.41854,-58.6519	1/2:254:0,120,134:0:0:120,134:4297,4757:-738.376,-387.951,-351.827,-350.781,0,-310.443	1/1:240:0,240,0:0:0:240,0:8576,0:-771.837,-72.2472,0,-771.837,-72.2472,-771.837	1/2:67:0,29,38:0:0:29,38:1027,1344:-193.477,-109.82,-101.09,-84.0115,0,-72.5723	1/2:9:0,2,7:0:0:2,7:72,250:-26.6149,-20.7395,-20.1374,-6.23466,0,-4.12745	1/2:161:0,93,67:0:0:93,67:3340,2335:-462.346,-189.878,-161.883,-272.461,0,-252.292	1/1:31:0,31,0:0:0:31,0:1116,0:-100.752,-9.33193,0,-100.752,-9.33193,-100.752	1/2:169:0,85,84:0:0:85,84:3020,2937:-485.367,-239.277,-213.689,-246.443,0,-221.156	1/2:71:0,31,40:0:0:31,40:1088,1402:-202.978,-114.434,-105.102,-88.8945,0,-76.8533	1/1:58:0,57,0:0:0:57,0:1996,0:-179.552,-17.1587,0,-179.552,-17.1587,-179.552	1/1:105:0,105,0:0:0:105,0:3768,0:-339.318,-31.6082,0,-339.318,-31.6082,-339.318	1/2:141:0,70,71:0:0:70,71:2488,2535:-409.771,-207.027,-185.955,-203.099,0,-181.726	1/1:204:1,201,2:1:28:201,2:7166,72:-642.143,-58.3149,0,-636.57,-54.579,-638.186	1/1:174:0,173,0:0:0:173,0:6119,0:-550.418,-52.0782,0,-550.418,-52.0782,-550.418	1/2:148:0,71,77:0:0:71,77:2534,2695:-426.198,-219.614,-198.24,-206.938,0,-183.758	1/1:278:0,278,0:0:0:278,0:9923,0:-893.014,-83.6863,0,-893.014,-83.6863,-893.014	1/2:9:0,4,5:0:0:4,5:144,178:-26.6149,-14.8635,-13.6594,-12.1095,0,-10.6043	1/1:151:0,151,0:0:0:151,0:5371,0:-483.523,-45.4555,0,-483.523,-45.4555,-483.523	1/2:31:0,14,17:0:0:14,17:504,598:-90.158,-49.0304,-44.816,-41.4837,0,-36.3662	1/2:17:0,15,2:0:0:15,2:540,72:-50.2959,-6.23466,-1.71921,-44.4211,0,-43.819	1/2:113:0,65,46:0:0:65,46:2319,1616:-320.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chr06	29000361	.	A	G	121667	PASS	AB=0.472664;ABP=36.8445;AC=136;AF=0.723404;AN=188;AO=5956;CIGAR=1X;DP=8729;DPB=8729;DPRA=0;EPP=12539.8;EPPR=5738.91;GTI=1;LEN=1;MEANALT=1.05319;MQM=59.6044;MQMR=59.9588;NS=94;NUMALT=1;ODDS=0.232489;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=211224;QR=99106;RO=2768;RPL=5910;RPP=12539.8;RPPR=5755.89;RPR=46;RUN=1;SAF=0;SAP=12936.3;SAR=5956;SRF=2;SRP=5996.29;SRR=2766;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:22,39:22:788:39:1387:-106.765,0,-52.882	0/1:89:47,42:47:1668:42:1493:-107.817,0,-123.613	0/1:229:114,115:114:4079:115:4056:-295.711,0,-298.36	1/1:176:1,175:1:36:175:6226:-556.798,-49.383,0	0/1:7:1,6:1:36:6:207:-16.8588,0,-1.49106	1/1:29:0,29:0:0:29:1027:-92.734,-8.72987,0	1/1:69:0,69:0:0:69:2455:-221.205,-20.7711,0	0/1:150:94,56:94:3363:56:1983:-133.518,0,-256.795	0/1:144:89,55:89:3183:55:1945:-131.939,0,-243.345	0/1:109:56,53:56:2008:53:1891:-137.647,0,-148.181	0/1:76:45,31:45:1608:31:1103:-76.6992,0,-122.132	1/1:120:0,119:0:0:119:4239:-381.043,-35.8226,0	0/1:116:61,55:61:2192:55:1956:-141.372,0,-162.626	0/1:95:46,49:46:1652:49:1743:-128.537,0,-120.371	1/1:94:0,94:0:0:94:3341:-300.901,-28.2968,0	0/1:67:37,30:37:1332:30:1054:-74.991,0,-100.013	0/1:48:28,20:28:999:20:694:-48.3309,0,-75.7751	1/1:45:0,45:0:0:45:1563:-140.939,-13.5464,0	0/1:47:25,22:25:900:22:771:-55.5619,0,-67.1726	0/1:102:52,50:52:1868:50:1774:-129.217,0,-137.694	0/1:227:135,92:135:4819:92:3241:-223.554,0,-365.532	1/1:46:0,46:0:0:46:1623:-146.014,-13.8474,0	0/1:161:79,82:79:2828:82:2893:-212.129,0,-206.293	0/1:60:8,52:8:288:52:1860:-149.599,0,-8.20561	0/1:64:37,27:37:1328:27:951:-66.6338,0,-100.556	1/1:184:0,184:0:0:184:6527:-587.45,-55.3895,0	0/1:335:150,185:150:5371:185:6570:-490.515,0,-382.676	0/1:43:20,23:20:720:23:815:-60.7219,0,-51.4043	0/1:204:134,70:134:4808:70:2487:-162.67,0,-371.464	0/1:101:43,58:43:1540:58:2059:-155.161,0,-108.299	0/1:147:65,82:65:2319:82:2864:-213.705,0,-164.718	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:14:8,6:8:288:6:212:-15.2104,0,-22.053	1/1:26:0,26:0:0:26:906:-81.8521,-7.82678,0	0/1:179:94,85:94:3367:85:3040:-219.943,0,-249.361	1/1:58:0,58:0:0:58:2067:-186.257,-17.4597,0	0/1:72:33,39:33:1184:39:1384:-103.123,0,-85.1942	0/1:8:7,1:7:243:1:36:-1.19004,0,-19.7992	0/1:113:71,42:71:2547:42:1491:-100.454,0,-195.463	1/1:61:0,61:0:0:61:2154:-194.099,-18.3628,0	0/1:137:67,70:67:2400:70:2461:-180.494,0,-175.016	0/1:83:44,39:44:1584:39:1395:-100.858,0,-117.866	1/1:85:0,85:0:0:85:3019:-271.524,-25.5876,0	1/1:80:0,80:0:0:80:2823:-254.306,-24.0824,0	0/1:106:63,43:63:2255:43:1528:-105.888,0,-171.303	1/1:135:0,135:0:0:135:4790:-431.161,-40.6391,0	1/1:70:0,70:0:0:70:2465:-222.089,-21.0721,0	0/1:139:82,57:82:2948:57:1987:-137.254,0,-223.71	1/1:66:0,66:0:0:66:2356:-212.274,-19.868,0	0/1:14:8,6:8:284:6:216:-15.5761,0,-21.6889	1/1:124:0,124:0:0:124:4391:-395.307,-37.3277,0	0/1:96:70,26:70:2508:26:928:-54.9394,0,-197.073	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/1:188:99,89:99:3534:89:3164:-228.236,0,-261.675	1/1:35:0,35:0:0:35:1223:-110.372,-10.5361,0	0/1:13:11,2:11:396:2:72:-2.92333,0,-32.0694	1/1:8:0,8:0:0:8:284:-25.8978,-2.40824,0	0/1:124:52,72:52:1859:72:2544:-191.863,0,-130.257	1/1:96:0,96:0:0:96:3406:-306.746,-28.8989,0	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	1/1:98:0,97:0:0:97:3432:-308.728,-29.1999,0	1/1:171:7,163:7:252:163:5804:-499.431,-28.506,0	0/1:68:35,33:35:1242:33:1180:-86.0357,0,-91.613	0/1:97:55,42:55:1972:42:1484:-104.641,0,-148.555	1/1:134:1,133:1:36:133:4727:-421.987,-36.7397,0	1/1:128:2,126:2:72:126:4495:-397.341,-31.6951,0	1/1:70:1,69:1:36:69:2435:-215.469,-17.4738,0	1/1:33:0,33:0:0:33:1168:-105.404,-9.93399,0	1/1:62:0,62:0:0:62:2184:-196.81,-18.6639,0	0/1:33:19,14:19:680:14:504:-35.7641,0,-51.5952	1/1:81:0,81:0:0:81:2869:-258.421,-24.3834,0	0/1:108:61,47:61:2196:47:1663:-117.445,0,-165.394	0/1:261:121,140:121:4313:140:4978:-369.582,0,-309.758	1/1:130:0,130:0:0:130:4613:-415.272,-39.1339,0	1/1:51:0,51:0:0:51:1823:-163.972,-15.3525,0	1/1:92:0,92:0:0:92:3257:-293.348,-27.6948,0	0/1:15:11,4:11:396:4:144:-8.79817,0,-31.4673	1/1:109:1,108:1:36:108:3856:-343.412,-29.214,0	1/1:87:0,87:0:0:87:3071:-275.947,-26.1896,0	1/1:184:7,177:7:252:177:6285:-542.702,-32.3606,0	0/1:74:39,35:39:1400:35:1239:-89.5257,0,-104.023	1/1:95:0,94:0:0:94:3372:-303.317,-28.2968,0	0/1:47:24,23:24:860:23:811:-59.1569,0,-63.5734	0/1:142:75,67:75:2666:67:2396:-173.013,0,-197.439	0/1:33:16,17:16:576:17:608:-45.118,0,-42.241	1/1:69:0,69:0:0:69:2440:-219.455,-20.7711,0	1/1:84:0,84:0:0:84:2989:-269.16,-25.2865,0	0/1:97:43,54:43:1544:54:1906:-142.594,0,-110.053	0/1:142:71,70:71:2552:70:2450:-177.873,0,-187.164	0/1:110:72,38:72:2571:38:1353:-88.9519,0,-198.526	1/1:89:0,89:0:0:89:3142:-282.99,-26.7917,0	1/1:110:0,110:0:0:110:3930:-353.88,-33.1133,0
chr06	29000382	.	G	A	123059	PASS	AB=0.473293;ABP=35.4871;AC=137;AF=0.728723;AN=188;AO=6027;CIGAR=1X;DP=8807;DPB=8807;DPRA=0;EPP=13055.8;EPPR=6031.02;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.5811;MQMR=59.9463;NS=94;NUMALT=1;ODDS=0.0629205;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=215712;QR=99235;RO=2776;RPL=6023;RPP=13055.8;RPPR=6031.02;RPR=4;RUN=1;SAF=0;SAP=13090.5;SAR=6027;SRF=0;SRP=6031.02;SRR=2776;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:20,37:20:720:37:1324:-102.303,0,-47.9701	0/1:87:46,41:46:1621:41:1468:-106.163,0,-119.987	0/1:229:116,113:116:4129:113:4045:-294.711,0,-302.859	1/1:179:1,178:1:36:178:6350:-567.838,-50.2861,0	1/1:6:0,6:0:0:6:216:-19.7896,-1.80618,0	1/1:28:0,28:0:0:28:989:-89.3218,-8.42884,0	1/1:72:0,72:0:0:72:2580:-232.447,-21.6742,0	0/1:153:97,56:97:3446:56:2008:-134.875,0,-263.666	0/1:147:91,56:91:3268:56:1997:-135.736,0,-250.085	0/1:111:58,53:58:2076:53:1904:-138.215,0,-153.696	0/1:77:44,33:44:1561:33:1169:-82.3336,0,-117.6	1/1:121:0,121:0:0:121:4332:-389.948,-36.4246,0	0/1:117:61,56:61:2179:56:2016:-146.468,0,-161.155	0/1:93:46,47:46:1648:47:1684:-123.832,0,-120.526	1/1:95:0,94:0:0:94:3376:-303.686,-28.2968,0	0/1:66:36,30:36:1280:30:1080:-77.6361,0,-95.6353	0/1:49:29,20:29:1044:20:716:-50.0172,0,-79.5243	1/1:44:0,44:0:0:44:1580:-142.472,-13.2453,0	0/1:46:24,22:24:864:22:784:-57.0365,0,-64.2352	0/1:106:53,53:53:1900:53:1884:-137.911,0,-139.369	0/1:228:134,94:134:4792:94:3376:-235.389,0,-362.802	1/1:45:0,45:0:0:45:1608:-144.667,-13.5464,0	0/1:165:81,84:81:2873:84:2994:-219.982,0,-209.137	0/1:61:8,53:8:288:53:1892:-152.18,0,-7.90458	0/1:62:36,26:36:1292:26:932:-65.5304,0,-97.9199	1/1:186:0,186:0:0:186:6653:-598.785,-55.9916,0	0/1:336:150,186:150:5384:186:6652:-497.096,0,-383.544	0/1:42:21,21:21:756:21:752:-55.3584,0,-54.944	0/1:206:134,72:134:4800:72:2580:-170.432,0,-370.143	0/1:102:42,60:42:1500:60:2129:-161.161,0,-104.399	0/1:144:63,81:63:2260:81:2895:-217.387,0,-160.314	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:14:8,6:8:288:6:208:-14.8447,0,-22.053	1/1:26:0,26:0:0:26:928:-83.8276,-7.82678,0	0/1:188:95,93:95:3405:93:3332:-243.481,0,-250.069	1/1:58:0,58:0:0:58:2084:-187.803,-17.4597,0	0/1:74:34,40:34:1200:40:1436:-107.2,0,-86.0266	0/1:8:7,1:7:248:1:36:-1.19004,0,-20.256	0/1:115:72,43:72:2584:43:1544:-104.621,0,-198.19	1/1:61:0,61:0:0:61:2188:-197.158,-18.3628,0	0/1:143:70,73:70:2512:73:2605:-191.613,0,-183.285	0/1:83:44,39:44:1580:39:1396:-100.949,0,-117.506	1/1:85:0,85:0:0:85:3013:-270.339,-25.5876,0	1/1:79:0,79:0:0:79:2821:-254.126,-23.7814,0	0/1:107:63,44:63:2248:44:1580:-110.265,0,-170.373	1/1:137:0,137:0:0:137:4892:-440.332,-41.2411,0	1/1:68:0,68:0:0:68:2444:-220.179,-20.47,0	0/1:136:80,56:80:2845:56:2004:-139.686,0,-215.347	1/1:71:0,71:0:0:71:2532:-227.987,-21.3731,0	0/1:14:8,6:8:280:6:216:-15.5761,0,-21.3249	1/1:130:0,130:0:0:130:4660:-419.461,-39.1339,0	0/1:97:71,26:71:2536:26:936:-55.3596,0,-199.292	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/1:188:99,88:99:3548:88:3156:-227.455,0,-262.876	1/1:34:0,34:0:0:34:1224:-110.465,-10.235,0	0/1:13:11,2:11:392:2:72:-2.92333,0,-31.7067	1/1:8:0,8:0:0:8:288:-26.2618,-2.40824,0	0/1:122:49,73:49:1752:73:2616:-198.899,0,-121.234	1/1:100:0,100:0:0:100:3592:-323.474,-30.103,0	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	1/1:104:0,104:0:0:104:3692:-332.108,-31.3071,0	1/1:172:6,166:6:201:166:5924:-514.825,-33.3601,0	0/1:68:36,32:36:1280:32:1152:-83.5178,0,-95.0332	0/1:99:58,41:58:2068:41:1476:-102.695,0,-156.587	1/1:133:0,133:0:0:133:4763:-428.818,-40.037,0	1/1:124:1,123:1:36:123:4416:-393.471,-33.7294,0	1/1:72:0,72:0:0:72:2592:-232.559,-21.6742,0	1/1:33:0,33:0:0:33:1188:-107.195,-9.93399,0	1/1:62:0,62:0:0:62:2228:-200.721,-18.6639,0	0/1:35:19,16:19:680:16:572:-41.2774,0,-50.9931	1/1:80:0,80:0:0:80:2860:-257.44,-24.0824,0	0/1:106:59,47:59:2116:47:1684:-119.938,0,-158.8	0/1:265:124,141:124:4416:141:5036:-373.466,0,-317.712	1/1:132:0,132:0:0:132:4713:-424.32,-39.736,0	1/1:51:0,51:0:0:51:1828:-164.422,-15.3525,0	1/1:94:0,94:0:0:94:3368:-303.323,-28.2968,0	0/1:15:11,4:11:392:4:144:-8.79817,0,-31.1046	1/1:111:0,111:0:0:111:3976:-357.804,-33.4143,0	1/1:86:0,86:0:0:86:3082:-277.112,-25.8886,0	1/1:186:7,177:7:248:177:6326:-546.753,-33.0255,0	0/1:74:39,35:39:1400:35:1252:-90.6948,0,-104.023	1/1:99:1,98:1:36:98:3508:-312.235,-26.2063,0	0/1:48:25,23:25:891:23:828:-60.39,0,-66.0593	0/1:142:73,69:73:2620:69:2480:-180.43,0,-193.301	0/1:33:16,17:16:576:17:608:-45.118,0,-42.241	1/1:71:0,71:0:0:71:2548:-228.547,-21.3731,0	1/1:85:0,85:0:0:85:3055:-274.837,-25.5876,0	0/1:97:43,54:43:1548:54:1940:-145.654,0,-110.413	0/1:146:75,71:75:2692:71:2529:-183.399,0,-198.574	0/1:110:72,38:72:2576:38:1352:-88.8624,0,-198.976	1/1:90:0,90:0:0:90:3224:-290.367,-27.0927,0	1/1:115:0,115:0:0:115:4124:-371.332,-34.6185,0
chr06	29709336	.	CCCG	GCCC	79340.1	PASS	AB=0.338458;ABP=4057.37;AC=95;AF=0.505319;AN=188;AO=6066;CIGAR=1X2M1X;DP=17899;DPB=17906;DPRA=0;EPP=13175.2;EPPR=25561.2;GTI=1;LEN=4;MEANALT=1.53191;MQM=58.5368;MQMR=59.993;NS=94;NUMALT=1;ODDS=54.0347;PAIRED=0;PAIREDR=0;PAO=24;PQA=594;PQR=0;PRO=0;QA=214225;QR=414233;RO=11774;RPL=0;RPP=13175.2;RPPR=25561.2;RPR=6066;RUN=1;SAF=6066;SAP=13175.2;SAR=0;SRF=11774;SRP=25569.9;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:69:58,10:58:2001:10:351:-11.0945,0,-159.532	0/1:228:161,65:161:5715:65:2298:-138.664,0,-446.08	0/1:207:158,49:158:5579:49:1724:-92.7724,0,-439.586	0/1:685:385,297:385:13581:297:10547:-742.45,0,-1016.43	0/1:145:122,23:122:4275:23:792:-27.8323,0,-341.285	0/1:138:95,42:95:3355:42:1473:-91.1327,0,-260.568	0/1:264:106,156:106:3719:156:5475:-413.107,0,-255.686	0/1:223:166,54:166:5835:54:1906:-105.212,0,-458.686	0/1:150:101,49:101:3511:49:1714:-109.373,0,-271.05	0/1:173:117,55:117:4156:55:1941:-122.703,0,-322.089	0/1:92:59,30:59:2101:30:1059:-68.3532,0,-162.208	0/1:116:69,47:69:2437:47:1648:-113.101,0,-184.306	0/1:82:68,13:68:2387:13:465:-17.3339,0,-190.344	0/1:105:70,33:70:2423:33:1162:-73.3526,0,-186.958	0/1:95:75,20:75:2669:20:709:-35.4444,0,-211.858	0/1:102:55,47:55:1946:47:1674:-120.118,0,-144.711	0/1:123:91,32:91:3220:32:1125:-64.4137,0,-252.998	0/1:126:91,34:91:3199:34:1214:-71.3737,0,-250.148	0/1:53:45,8:45:1556:8:282:-9.76407,0,-124.372	0/1:329:266,62:266:9438:62:2193:-98.2044,0,-750.3	0/1:284:185,98:185:6516:98:3416:-221.944,0,-500.981	0/1:175:109,66:109:3835:66:2337:-157.501,0,-292.669	0/1:144:120,24:120:4199:24:836:-32.1993,0,-334.748	0/1:237:146,89:146:5166:89:3169:-214.301,0,-393.984	0/1:97:86,11:86:3005:11:389:-6.1439,0,-241.485	0/1:631:345,284:345:12137:284:10096:-718.329,0,-902.637	0/1:297:234,59:234:8246:59:2090:-99.4703,0,-653.603	0/1:56:48,8:48:1682:8:280:-8.67879,0,-134.807	0/1:432:339,92:339:11977:92:3264:-163.741,0,-947.699	0/1:264:193,71:193:6837:71:2513:-146.565,0,-535.575	0/1:214:159,55:159:5637:55:1919:-107.991,0,-443.036	0/1:9:2,7:2:71:7:243:-19.4805,0,-4.03279	0/1:14:2,12:2:72:12:432:-35.0023,0,-2.6223	1/1:12:0,12:0:0:12:418:-37.8181,-3.61236,0	0/1:4:1,3:1:30:3:108:-8.8698,0,-1.79545	0/1:8:2,6:2:72:6:216:-17.3798,0,-4.42848	0/1:329:234,95:234:8301:95:3355:-203.096,0,-648.068	0/1:388:237,151:237:8314:151:5320:-361.633,0,-631.259	0/1:71:45,26:45:1589:26:918:-61.4485,0,-121.928	0/1:4:2,2:2:70:2:72:-5.63176,0,-5.44328	0/1:290:210,80:210:7330:80:2828:-167.327,0,-572.466	0/1:47:25,22:25:891:22:782:-56.5468,0,-66.3614	0/1:281:236,45:236:8250:45:1552:-55.3625,0,-657.942	0/1:131:88,43:88:3094:43:1512:-96.71,0,-239.255	0/1:122:82,40:82:2893:40:1422:-91.4505,0,-223.883	0/1:240:162,78:162:5731:78:2752:-175.543,0,-443.667	0/1:186:151,35:151:5316:35:1252:-56.9807,0,-422.589	0/1:511:377,132:377:13198:132:4611:-261.117,0,-1034.09	0/1:255:141,114:141:4962:114:4039:-286.792,0,-369.974	0/1:410:305,104:305:10712:104:3683:-208.049,0,-840.532	0/1:321:186,134:186:6580:134:4747:-330.442,0,-495.601	0/1:15:8,7:8:274:7:252:-18.5107,0,-20.4778	0/1:267:185,81:185:6456:81:2896:-180.336,0,-500.824	0/1:37:13,24:13:462:24:855:-66.1244,0,-30.7781	0/1:26:22,4:22:781:4:142:-5.19258,0,-62.7865	0/1:241:178,63:178:6242:63:2249:-130.101,0,-489.337	0/1:77:57,19:57:2008:19:671:-37.4718,0,-157.755	0/1:7:2,5:2:72:5:180:-14.4428,0,-4.72951	0/1:50:22,28:22:788:28:965:-71.9912,0,-56.1929	0/1:119:77,42:77:2707:42:1483:-97.8195,0,-208.052	0/1:191:99,91:99:3509:91:3214:-231.921,0,-258.597	0/1:9:6,3:6:208:3:106:-7.17873,0,-16.3497	0/1:548:304,244:304:10739:244:8579:-606.483,0,-801.469	0/1:553:317,232:317:11095:232:8158:-567.353,0,-832.844	0/1:182:147,35:147:5175:35:1251:-57.902,0,-411.111	0/1:131:100,31:100:3490:31:1103:-60.0482,0,-274.879	0/1:430:266,160:266:9342:160:5624:-377.384,0,-712.23	0/1:298:160,137:160:5599:137:4873:-348.19,0,-414.275	0/1:47:28,19:28:973:19:681:-47.3774,0,-73.732	0/1:159:92,67:92:3255:67:2375:-166.016,0,-245.31	0/1:163:92,71:92:3204:71:2493:-175.426,0,-239.515	0/1:47:22,25:22:770:25:887:-65.8837,0,-55.4704	0/1:210:111,98:111:3917:98:3506:-252.122,0,-289.453	0/1:155:100,54:100:3503:54:1902:-124.72,0,-268.763	0/1:297:159,138:159:5571:138:4880:-349.471,0,-412.117	0/1:376:233,143:233:8217:143:5029:-339.038,0,-626.186	0/1:166:137,29:137:4827:29:1016:-41.7406,0,-384.618	0/1:300:186,112:186:6521:112:3985:-268.225,0,-496.921	0/1:30:20,10:20:713:10:350:-22.8018,0,-55.4666	0/1:310:200,109:200:7067:109:3857:-253.806,0,-542.724	0/1:295:218,77:218:7666:77:2705:-154.865,0,-601.185	0/1:418:247,169:247:8712:169:6011:-414.876,0,-658.588	0/1:163:119,43:119:4180:43:1536:-89.1785,0,-327.26	0/1:113:74,39:74:2604:39:1387:-91.0984,0,-200.592	0/1:142:103,39:103:3572:39:1378:-81.4729,0,-278.946	0/1:254:171,81:171:5997:81:2778:-173.882,0,-463.628	0/1:66:47,19:47:1644:19:657:-39.447,0,-128.378	0/1:148:86,62:86:3035:62:2174:-151.262,0,-228.828	0/1:122:65,57:65:2285:57:2032:-145.535,0,-168.826	0/1:32:18,14:18:623:14:490:-34.7936,0,-46.7594	0/1:98:59,39:59:2082:39:1383:-95.0968,0,-158.148	0/1:127:83,44:83:2904:44:1564:-102.699,0,-223.365	0/1:327:212,115:212:7451:115:4005:-261.605,0,-572.212	0/1:184:119,63:119:4177:63:2240:-146.727,0,-321.003
chr06	29969236	.	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chr06	29969266	.	C	T	114995	PASS	AB=0.518612;ABP=17.3174;AC=140;AF=0.744681;AN=188;AO=8468;CIGAR=1X;DP=10770;DPB=10770;DPRA=0;EPP=17899.3;EPPR=4980.04;GTI=2;LEN=1;MEANALT=1.02128;MQM=27.3968;MQMR=49.8587;NS=94;NUMALT=1;ODDS=0.857175;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=303196;QR=81964;RO=2300;RPL=8411;RPP=17899.3;RPPR=4980.04;RPR=57;RUN=1;SAF=8468;SAP=18391;SAR=0;SRF=2300;SRP=4997.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:23,21:23:828:21:748:-35.1861,0,-61.0253	0/1:184:93,91:93:3306:91:3251:-154.423,0,-238.803	0/1:127:63,64:63:2260:64:2300:-109.977,0,-163.818	1/1:265:0,265:0:0:265:9515:-651.521,-79.773,0	1/1:130:0,130:0:0:130:4663:-299.953,-39.1339,0	1/1:130:0,130:0:0:130:4660:-300.033,-39.1339,0	1/1:189:1,188:1:36:188:6720:-457.26,-53.3082,0	0/1:310:146,164:146:5207:164:5875:-284.092,0,-372.834	0/1:109:76,33:76:2720:33:1188:-43.1845,0,-209.853	0/1:132:63,68:63:2242:68:2444:-127.043,0,-161.53	0/1:29:16,13:16:561:13:468:-23.4778,0,-41.9373	1/1:64:0,64:0:0:64:2296:-148.238,-19.2659,0	0/1:44:21,23:21:739:23:811:-40.0038,0,-53.3262	0/1:46:25,21:25:879:21:748:-34.6671,0,-65.0524	0/1:45:18,27:18:648:27:972:-52.8037,0,-44.854	1/1:46:0,46:0:0:46:1644:-105.104,-13.8474,0	0/1:48:18,30:18:644:30:1062:-54.5083,0,-43.6012	1/1:58:0,58:0:0:58:2075:-133.66,-17.4597,0	0/1:16:8,8:8:288:8:288:-13.8621,0,-21.0806	0/1:232:107,125:107:3825:125:4484:-236.577,0,-272.692	0/1:202:105,97:105:3728:97:3468:-164.478,0,-272.719	1/1:189:0,189:0:0:189:6747:-487.591,-56.8947,0	0/1:38:20,18:20:716:18:640:-32.8525,0,-53.1145	1/1:128:5,123:5:180:123:4411:-267.738,-22.0695,0	0/1:59:37,22:37:1315:22:792:-33.1575,0,-100.3	1/1:412:0,412:0:0:412:14765:-1063.31,-124.024,0	0/1:143:82,61:82:2905:61:2192:-97.6312,0,-216.763	0/1:22:7,15:7:252:15:540:-28.9273,0,-16.2814	0/1:259:130,129:130:4668:129:4621:-257.399,0,-341.395	0/1:349:147,202:147:5264:202:7215:-359.896,0,-365.286	0/1:232:103,129:103:3678:129:4607:-244.948,0,-258.976	1/1:5:0,5:0:0:5:180:-11.5126,-1.50515,0	1/1:24:0,24:0:0:24:852:-55.3725,-7.22472,0	1/1:6:0,6:0:0:6:216:-14.0729,-1.80618,0	0/1:11:4,7:4:144:7:252:-13.0644,0,-9.96004	1/1:6:0,6:0:0:6:212:-14.0217,-1.80618,0	0/1:134:56,78:56:1999:78:2804:-162.844,0,-139.03	1/1:302:0,302:0:0:302:10835:-696.217,-90.9111,0	0/1:35:16,19:16:572:19:680:-33.4232,0,-40.5639	1/1:4:0,4:0:0:4:144:-9.46721,-1.20412,0	0/1:192:86,106:86:3072:106:3795:-186.518,0,-216.862	1/1:27:0,27:0:0:27:972:-62.1795,-8.12781,0	0/1:169:76,93:76:2695:93:3327:-163.204,0,-190.103	0/1:30:7,23:7:228:23:816:-47.0734,0,-11.5695	1/1:63:0,63:0:0:63:2233:-155.144,-18.9649,0	1/1:106:1,105:1:36:105:3725:-265.652,-28.4065,0	0/1:201:103,98:103:3696:98:3508:-165.337,0,-269.956	1/1:205:0,205:0:0:205:7351:-503.204,-61.7112,0	1/1:142:0,142:0:0:142:5099:-347.187,-42.7463,0	0/1:219:109,110:109:3911:110:3924:-202.91,0,-283.398	1/1:200:0,200:0:0:200:7172:-518.501,-60.206,0	0/1:10:6,4:6:216:4:135:-6.84566,0,-16.6898	1/1:153:0,153:0:0:153:5450:-350.58,-46.0576,0	0/1:86:42,44:42:1483:44:1559:-84.6624,0,-107.574	0/1:27:19,8:19:676:8:288:-10.5507,0,-52.543	0/1:146:73,73:73:2594:73:2616:-124.146,0,-187.861	1/1:22:0,22:0:0:22:788:-53.4753,-6.62266,0	0/1:7:3,4:3:108:4:144:-8.47895,0,-7.93525	1/1:35:0,35:0:0:35:1247:-90.9622,-10.5361,0	0/1:106:57,49:57:2023:49:1748:-81.8131,0,-148.441	1/1:127:1,126:1:36:126:4520:-306.617,-34.6443,0	0/1:12:7,5:7:244:5:180:-8.81087,0,-18.6216	1/1:244:0,244:0:0:244:8754:-633.145,-73.4513,0	1/1:250:1,249:1:36:249:8909:-607.556,-71.6787,0	0/1:91:46,45:46:1636:45:1599:-76.2284,0,-118.638	0/1:107:64,43:64:2275:43:1535:-74.6261,0,-171.583	1/1:221:1,220:1:36:220:7869:-534.923,-62.9411,0	1/1:135:1,134:1:36:134:4804:-326.542,-37.0526,0	1/1:16:0,16:0:0:16:576:-37.1827,-4.81648,0	1/1:85:0,85:0:0:85:3047:-195.571,-25.5876,0	1/1:104:0,104:0:0:104:3721:-265.689,-31.3071,0	0/1:19:4,15:4:144:15:536:-31.2928,0,-7.36645	1/1:200:1,199:1:36:199:7152:-455.743,-56.623,0	0/1:61:24,37:24:856:37:1328:-67.1287,0,-58.1421	1/1:302:0,301:0:0:301:10784:-692.201,-90.61,0	1/1:177:0,177:0:0:177:6346:-433.504,-53.2823,0	1/1:167:0,167:0:0:167:5983:-384.588,-50.272,0	1/1:144:0,144:0:0:144:5151:-331.724,-43.3483,0	0/1:8:6,2:6:212:2:72:-2.4533,0,-16.1557	1/1:151:0,151:0:0:151:5410:-348.478,-45.4555,0	1/1:130:0,130:0:0:130:4659:-300.446,-39.1339,0	1/1:257:0,257:0:0:257:9207:-628.183,-77.3647,0	0/1:113:58,55:58:2072:55:1972:-101.232,0,-150.852	1/1:50:0,50:0:0:50:1788:-121.625,-15.0515,0	0/1:65:27,38:27:941:38:1360:-73.5779,0,-65.1205	0/1:103:34,69:34:1194:69:2461:-138.784,0,-76.0599	0/1:36:15,21:15:540:21:743:-37.5359,0,-37.6349	1/1:68:0,68:0:0:68:2427:-156.898,-20.47,0	1/1:50:0,50:0:0:50:1800:-115.708,-15.0515,0	0/1:23:8,15:8:270:15:540:-27.784,0,-17.5911	0/1:36:13,23:13:468:23:828:-42.4653,0,-31.3963	0/1:38:17,21:17:590:21:756:-40.5487,0,-41.7549	1/1:150:0,150:0:0:150:5385:-367.112,-45.1545,0	1/1:76:0,76:0:0:76:2712:-186.112,-22.8783,0
chr06	29969280	.	T	G	109955	PASS	AB=0.516942;ABP=14.7828;AC=140;AF=0.744681;AN=188;AO=8361;CIGAR=1X;DP=10658;DPB=10658;DPRA=0;EPP=18158.7;EPPR=4969.17;GTI=3;LEN=1;MEANALT=1.07447;MQM=27.3943;MQMR=49.801;NS=94;NUMALT=1;ODDS=1.2099;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=296619;QR=80170;RO=2287;RPL=8361;RPP=18158.7;RPPR=4969.17;RPR=0;RUN=1;SAF=8361;SAP=18158.7;SAR=0;SRF=2287;SRP=4969.17;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:24,20:24:830:20:707:-32.8248,0,-61.2392	0/1:185:95,88:95:3366:88:3147:-147.391,0,-244.273	0/1:128:65,63:65:2277:63:2248:-106.551,0,-165.068	1/1:266:0,266:0:0:266:9449:-652.041,-80.074,0	1/1:127:0,127:0:0:127:4523:-292.332,-38.2308,0	1/1:128:0,128:0:0:128:4561:-294.555,-38.5318,0	1/1:190:1,189:1:36:189:6704:-458.746,-53.6092,0	0/1:311:147,163:147:5183:163:5768:-279.057,0,-369.985	0/1:106:75,31:75:2626:31:1112:-39.4314,0,-202.647	0/1:135:64,70:64:2266:70:2496:-131.556,0,-162.724	0/1:29:16,13:16:563:13:464:-23.4038,0,-42.1247	1/1:64:0,64:0:0:64:2275:-147.896,-19.2659,0	0/1:42:21,21:21:748:21:744:-35.8207,0,-54.7292	0/1:43:22,21:22:768:21:744:-35.5196,0,-56.1352	0/1:45:18,27:18:624:27:940:-51.8986,0,-42.7588	1/1:47:0,47:0:0:47:1627:-106.634,-14.1484,0	0/1:48:19,29:19:671:29:1028:-52.387,0,-46.0303	1/1:58:0,58:0:0:58:2039:-132.797,-17.4597,0	0/1:16:8,8:8:275:8:280:-13.7602,0,-20.0498	0/1:234:107,127:107:3756:127:4501:-238.931,0,-265.126	0/1:202:106,96:106:3735:96:3396:-160.256,0,-273.561	1/1:187:0,187:0:0:187:6640:-480.797,-56.2926,0	0/1:36:19,17:19:671:17:604:-30.9919,0,-49.6907	1/1:128:5,123:5:180:123:4396:-267.318,-22.0695,0	0/1:63:37,26:37:1308:26:932:-41.1143,0,-98.4911	1/1:408:0,408:0:0:408:14474:-1048.32,-122.82,0	0/1:141:81,59:81:2833:59:2108:-93.4399,0,-210.77	0/1:22:7,15:7:233:15:521:-28.3533,0,-14.5747	0/1:262:133,129:133:4653:129:4570:-255.415,0,-338.979	0/1:345:146,199:146:5144:199:7061:-352.664,0,-355.509	0/1:230:106,124:106:3682:124:4347:-230.906,0,-260.209	1/1:5:0,5:0:0:5:176:-11.4613,-1.50515,0	1/1:23:0,23:0:0:23:820:-53.1202,-6.92369,0	1/1:6:0,6:0:0:6:212:-14.0217,-1.80618,0	0/1:10:3,7:3:108:7:252:-13.3654,0,-7.02224	1/1:6:0,6:0:0:6:216:-14.0729,-1.80618,0	0/1:136:55,81:55:1910:81:2847:-167.87,0,-130.525	1/1:297:0,297:0:0:297:10565:-682.773,-89.4059,0	0/1:36:16,20:16:555:20:695:-35.0815,0,-38.7457	1/1:4:0,4:0:0:4:144:-9.46721,-1.20412,0	0/1:190:85,105:85:3001:105:3689:-183.274,0,-211.159	1/1:26:0,26:0:0:26:930:-59.8155,-7.82678,0	0/1:168:75,93:75:2650:93:3305:-162.974,0,-186.261	0/1:31:6,25:6:207:25:888:-51.4868,0,-9.55074	1/1:61:0,61:0:0:61:2106:-149.216,-18.3628,0	1/1:106:1,105:1:36:105:3715:-266.563,-28.4065,0	0/1:199:101,98:101:3576:98:3482:-165.446,0,-259.875	1/1:205:0,205:0:0:205:7267:-500.946,-61.7112,0	1/1:141:0,141:0:0:141:5038:-344.313,-42.4452,0	0/1:211:106,105:106:3754:105:3697:-192.044,0,-272.963	1/1:199:0,199:0:0:199:7039:-512.342,-59.905,0	0/1:9:6,3:6:216:3:108:-4.9521,0,-16.9908	1/1:149:0,149:0:0:149:5331:-342.427,-44.8535,0	0/1:87:42,45:42:1451:45:1600:-87.2122,0,-104.405	0/1:27:19,8:19:663:8:288:-10.5507,0,-51.3902	0/1:143:72,71:72:2481:71:2508:-119.304,0,-178.717	1/1:21:0,21:0:0:21:744:-51.0023,-6.32163,0	0/1:7:3,4:3:104:4:144:-8.47895,0,-7.56574	1/1:34:0,34:0:0:34:1220:-88.8635,-10.235,0	0/1:101:55,46:55:1947:46:1644:-75.7123,0,-142.941	1/1:124:1,123:1:36:123:4392:-298.953,-33.7412,0	0/1:10:5,5:5:152:5:180:-9.41293,0,-10.9419	1/1:239:0,239:0:0:239:8474:-618.006,-71.9462,0	1/1:242:1,241:1:36:241:8587:-586.925,-69.2705,0	0/1:92:46,45:46:1584:45:1607:-76.1487,0,-113.926	0/1:99:61,38:61:2118:38:1356:-64.6856,0,-159.945	1/1:217:1,216:1:36:216:7650:-524.017,-61.737,0	1/1:132:1,131:1:36:131:4657:-317.828,-36.1495,0	1/1:16:0,16:0:0:16:559:-36.8557,-4.81648,0	1/1:84:0,84:0:0:84:2956:-192.063,-25.2865,0	1/1:100:0,100:0:0:100:3571:-256.317,-30.103,0	0/1:19:4,15:4:135:15:519:-30.8823,0,-6.54486	1/1:191:1,190:1:36:190:6724:-432.263,-53.9137,0	0/1:61:23,38:23:812:38:1356:-69.3308,0,-54.368	1/1:305:0,302:0:0:302:10717:-692.992,-90.9111,0	1/1:177:0,177:0:0:177:6265:-430.167,-53.2823,0	1/1:161:0,161:0:0:161:5716:-369.661,-48.4658,0	1/1:140:0,139:0:0:139:4965:-319.723,-41.8432,0	0/1:8:6,2:6:199:2:72:-2.4533,0,-14.9869	1/1:147:0,147:0:0:147:5218:-338.174,-44.2514,0	1/1:127:0,127:0:0:127:4539:-292.533,-38.2308,0	1/1:254:0,254:0:0:254:9000:-618.893,-76.4616,0	0/1:114:58,56:58:2052:56:1983:-102.838,0,-148.763	1/1:51:0,51:0:0:51:1811:-123.823,-15.3525,0	0/1:63:26,37:26:880:37:1303:-71.2814,0,-60.3262	0/1:102:35,67:35:1203:67:2371:-134.113,0,-77.303	0/1:34:15,19:15:517:19:676:-33.6737,0,-36.1848	1/1:68:0,68:0:0:68:2373:-155.719,-20.47,0	1/1:50:0,50:0:0:50:1745:-115.012,-15.0515,0	0/1:22:8,14:8:276:14:500:-25.65,0,-18.4311	0/1:35:11,24:11:379:24:843:-44.726,0,-23.746	0/1:41:17,24:17:596:24:852:-46.8122,0,-41.3879	1/1:151:0,151:0:0:151:5354:-369.215,-45.4555,0	1/1:74:0,74:0:0:74:2652:-181.872,-22.2762,0
chr06	30784943	.	GT	AG,AT	496118	PASS	AB=0.534921,0.463855;ABP=115.542,123.566;AC=139,49;AF=0.739362,0.260638;AN=188;AO=18036,4940;CIGAR=2X,1X1M;DP=22997;DPB=22997.5;DPRA=0,1.81432;EPP=39106.9,10591.6;EPPR=7.35324;GTI=1;LEN=2,1;MEANALT=1.81915,2.27586;MQM=59.4139,59.9741;MQMR=60;NS=94;NUMALT=2;ODDS=1.97376;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=36,0;PQR=0;PRO=0;QA=641083,176759;QR=61;RO=2;RPL=7,16;RPP=39106.9,10591.6;RPPR=7.35324;RPR=18029,4924;RUN=1,1;SAF=18036,4940;SAP=39167.7,10730.1;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:69:0,35,33:0:0:35,33:1245,1184:-198.022,-96.5713,-86.0352,-101.448,0,-91.5145	1/2:82:0,50,32:0:0:50,32:1750,1148:-236.125,-93.9969,-78.9454,-142.483,0,-132.85	1/2:105:0,46,59:0:0:46,59:1654,2112:-307.498,-172.588,-158.741,-135.269,0,-117.508	1/1:205:0,205,0:0:0:205,0:7247,0:-652.118,-61.7112,0,-652.118,-61.7112,-652.118	1/1:73:0,72,1:0:0:72,1:2526,36:-227.076,-21.6742,0,-224.138,-18.3769,-223.837	1/1:32:0,32,0:0:0:32,0:1150,0:-103.81,-9.63296,0,-103.81,-9.63296,-103.81	1/1:87:0,87,0:0:0:87,0:3102,0:-279.399,-26.1896,0,-279.399,-26.1896,-279.399	1/2:124:0,67,57:0:0:67,57:2352,2044:-357.596,-167.073,-146.904,-190.877,0,-173.718	1/1:162:0,162,0:0:0:162,0:5787,0:-520.854,-48.7669,0,-520.854,-48.7669,-520.854	1/2:76:0,42,34:0:0:42,34:1508,1220:-222.878,-99.8718,-87.2285,-123.365,0,-113.13	1/2:286:1,124,160:1:25:124,160:4380,5721:-820.929,-464.589,-429.209,-354.743,0,-308.526	1/1:84:0,84,0:0:0:84,0:2980,0:-268.406,-25.2865,0,-268.406,-25.2865,-268.406	1/1:52:0,52,0:0:0:52,0:1844,0:-166.168,-15.6536,0,-166.168,-15.6536,-166.168	1/2:42:0,20,22:0:0:20,22:718,779:-122.37,-63.8094,-57.7888,-58.9171,0,-52.2944	1/2:49:0,24,25:0:0:24,25:858,896:-143.305,-73.4346,-66.2099,-70.2281,0,-62.7023	1/1:51:0,51,0:0:0:51,0:1808,0:-162.924,-15.3525,0,-162.924,-15.3525,-162.924	1/1:37:0,37,0:0:0:37,0:1319,0:-118.976,-11.1381,0,-118.976,-11.1381,-118.976	1/1:31:0,31,0:0:0:31,0:1112,0:-100.341,-9.33193,0,-100.341,-9.33193,-100.341	1/2:108:0,46,62:0:0:46,62:1624,2220:-313.614,-181.401,-167.553,-132.569,0,-113.905	1/1:171:0,171,0:0:0:171,0:6082,0:-547.439,-51.4761,0,-547.439,-51.4761,-547.439	1/1:143:0,143,0:0:0:143,0:5041,0:-453.701,-43.0473,0,-453.701,-43.0473,-453.701	1/2:124:0,33,91:0:0:33,91:1173,3225:-358.665,-263.079,-253.145,-95.9417,0,-68.548	1/2:136:0,80,55:0:0:80,55:2834,1967:-391.243,-160.387,-136.305,-230.852,0,-214.295	1/1:88:0,88,0:0:0:88,0:3139,0:-282.717,-26.4906,0,-282.717,-26.4906,-282.717	1/2:75:0,55,20:0:0:55,20:1965,716:-218.816,-58.7471,-42.1905,-160.427,0,-154.406	1/2:296:0,171,124:0:0:171,124:6076,4435:-856.833,-361.741,-310.265,-495.198,0,-457.87	1/2:260:0,153,107:0:0:153,107:5430,3807:-752.977,-310.62,-264.562,-442.712,0,-410.502	1/2:28:0,19,9:0:0:19,9:682,309:-81.0735,-25.4314,-19.7119,-55.9903,0,-53.281	1/2:264:0,129,135:0:0:129,135:4589,4799:-765.405,-391.425,-352.592,-374.336,0,-333.697	1/2:185:0,106,79:0:0:106,79:3764,2810:-536.035,-229.355,-197.446,-307.035,0,-283.253	1/2:159:0,81,78:0:0:81,78:2879,2792:-462.497,-228.003,-203.62,-234.85,0,-211.37	1/2:950:0,565,384:0:0:565,384:20105,13730:-2757.9,-1119.52,-949.442,-1638.37,0,-1522.77	1/2:922:0,574,347:0:0:574,347:20397,12421:-2674.53,-1012.93,-840.135,-1661.62,0,-1557.16	1/1:1148:0,1146,1:0:0:1146,1:40756,36:-3665.09,-344.98,0,-3662.16,-341.978,-3661.85	1/1:1844:0,1843,1:0:0:1843,1:65485,36:-5886.56,-554.798,0,-5883.62,-551.501,-5883.32	1/1:1380:0,1377,1:0:0:1377,1:48893,36:-4395.3,-414.518,0,-4392.55,-411.769,-4392.25	1/1:158:0,158,0:0:0:158,0:5632,0:-506.979,-47.5627,0,-506.979,-47.5627,-506.979	1/2:150:0,76,74:0:0:76,74:2681,2660:-435.638,-217.369,-194.491,-218.625,0,-196.349	1/2:250:0,129,120:0:0:129,120:4605,4312:-727.078,-351.88,-313.047,-375.304,0,-339.181	1/2:591:0,323,268:0:0:323,268:11514,9628:-1723.13,-785.786,-688.554,-937.702,0,-857.026	1/2:143:0,63,80:0:0:63,80:2242,2872:-417.341,-234.634,-215.669,-183.064,0,-158.981	1/2:167:0,76,91:0:0:76,91:2712,3260:-487.313,-266.227,-243.349,-221.444,0,-194.05	1/2:178:0,112,65:0:0:112,65:3947,2328:-511.129,-189.947,-156.232,-321.277,0,-301.71	1/2:25:0,11,14:0:0:11,14:394,504:-73.6123,-41.4833,-38.1719,-32.4878,0,-28.2734	1/1:51:0,51,0:0:0:51,0:1817,0:-163.802,-15.3525,0,-163.802,-15.3525,-163.802	1/1:153:0,153,0:0:0:153,0:5422,0:-488.036,-46.0576,0,-488.036,-46.0576,-488.036	1/2:116:0,63,53:0:0:63,53:2222,1885:-334.876,-153.972,-135.007,-181.258,0,-165.304	1/1:153:0,151,2:0:0:151,2:5401,72:-485.827,-45.4555,0,-479.952,-39.2209,-479.35	1/2:84:0,51,33:0:0:51,33:1800,1188:-243.65,-97.2946,-81.9421,-146.713,0,-136.779	1/2:143:0,81,62:0:0:81,62:2878,2219:-415.804,-181.311,-156.927,-234.85,0,-216.186	1/1:146:0,146,0:0:0:146,0:5218,0:-469.751,-43.9504,0,-469.751,-43.9504,-469.751	1/2:1116:0,560,556:0:0:560,556:19868,19904:-3241.79,-1623.45,-1454.88,-1618.69,0,-1451.32	1/1:120:0,120,0:0:0:120,0:4282,0:-385.129,-36.1236,0,-385.129,-36.1236,-385.129	1/1:86:0,86,0:0:0:86,0:3080,0:-277.395,-25.8886,0,-277.395,-25.8886,-277.395	1/1:591:0,591,0:0:0:591,0:20955,0:-1884.54,-177.909,0,-188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chr06	30828791	.	GAT	CAA	105723	PASS	AB=0.471762;ABP=74.1382;AC=49;AF=0.260638;AN=188;AO=4874;CIGAR=1X1M1X;DP=20857;DPB=20863.3;DPRA=1.22774;EPP=10586.8;EPPR=34594.6;GTI=1;LEN=3;MEANALT=1.3871;MQM=59.8396;MQMR=59.9926;NS=94;NUMALT=1;ODDS=5.1705;PAIRED=0;PAIREDR=0;PAO=19;PQA=495;PQR=0;PRO=0;QA=171523;QR=558084;RO=15942;RPL=3051;RPP=674.85;RPPR=615.196;RPR=1823;RUN=1;SAF=3051;SAP=674.85;SAR=1823;SRF=9034;SRP=618.666;SRR=6908;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:52,21:52:1815:21:739:-44.4957,0,-141.293	0/1:238:176,60:176:6113:60:2149:-120.561,0,-478.969	0/1:225:122,100:122:4215:100:3525:-250.281,0,-312.377	0/0:532:530,1:530:18648:1:36:0,-156.632,-1674.36	0/0:161:161,0:161:5630:0:0:0,-48.4658,-506.828	0/0:134:134,0:134:4716:0:0:0,-40.338,-424.601	0/0:374:373,1:373:13035:1:36:0,-108.987,-1169.39	0/1:275:188,84:188:6566:84:2967:-184.94,0,-508.821	0/0:275:275,0:275:9584:0:0:0,-82.7832,-862.541	0/1:296:158,138:158:5511:138:4876:-349.785,0,-407.014	0/1:118:60,58:60:2139:58:2025:-146.814,0,-157.072	0/0:171:170,0:170:5974:0:0:0,-51.1751,-537.418	0/0:189:188,0:188:6609:0:0:0,-56.5936,-594.54	0/1:130:61,69:61:2134:69:2403:-177.39,0,-153.194	0/1:137:80,57:80:2805:57:2004:-139.393,0,-211.448	0/0:136:136,0:136:4777:0:0:0,-40.9401,-430.095	0/0:124:123,0:123:4285:0:0:0,-37.0267,-385.473	0/0:135:135,0:135:4675:0:0:0,-40.639,-420.918	0/1:68:54,14:54:1914:14:493:-23.8727,0,-151.708	0/0:505:503,1:503:17659:1:31:0,-148.955,-1585.84	0/0:415:411,3:411:14299:3:98:0,-115.722,-1277.59	0/1:217:77,140:77:2675:140:4894:-375.226,0,-175.673	0/1:218:98,120:98:3449:120:4216:-313.997,0,-245	0/0:285:285,0:285:10030:0:0:0,-85.7935,-902.655	0/1:205:103,102:103:3596:102:3579:-260.519,0,-262.139	0/1:713:342,369:342:11896:369:13003:-955.8,0,-856.283	0/1:657:351,306:351:12269:306:10814:-774.945,0,-905.947	0/1:81:46,35:46:1612:35:1230:-86.6183,0,-120.984	0/1:619:326,292:326:11452:292:10250:-736.071,0,-844.264	0/1:298:165,133:165:5783:133:4661:-329.583,0,-430.522	0/1:252:124,128:124:4332:128:4497:-328.684,0,-313.84	0/1:7:3,4:3:100:4:141:-10.9297,0,-7.22265	0/1:21:11,10:11:391:10:354:-25.8782,0,-29.2079	0/0:7:7,0:7:240:0:0:0,-2.10721,-21.9343	0/0:18:18,0:18:613:0:0:0,-5.41854,-55.4877	0/0:15:15,0:15:500:0:0:0,-4.51545,-45.3155	0/0:352:351,0:351:12296:0:0:0,-105.662,-1106.15	0/1:381:165,215:165:5779:215:7558:-565.637,0,-405.601	0/1:103:76,25:76:2647:25:885:-49.2036,0,-207.713	0/1:5:3,2:3:98:2:70:-5.14218,0,-7.63863	0/1:337:160,176:160:5628:176:6193:-456.005,0,-405.181	0/1:69:35,33:35:1234:33:1143:-82.3256,0,-90.5336	0/1:359:154,205:154:5436:205:7257:-544.468,0,-381.304	0/1:199:96,103:96:3395:103:3615:-265.652,0,-245.861	0/0:135:135,0:135:4658:0:0:0,-40.639,-419.393	0/0:253:250,0:250:8760:0:0:0,-75.2575,-788.045	0/1:224:150,73:150:5247:73:2592:-166.053,0,-404.917	0/0:418:416,2:416:14540:2:69:0,-119.278,-1301.83	0/1:251:107,144:107:3759:144:5019:-376.109,0,-262.955	0/1:372:192,180:192:6766:180:6364:-460.875,0,-497.038	0/0:286:285,0:285:10057:0:0:0,-85.7935,-904.83	0/1:11:6,5:6:208:5:178:-13.0573,0,-15.7472	0/0:285:285,0:285:9989:0:0:0,-85.7935,-898.964	0/0:168:167,0:167:5867:0:0:0,-50.272,-527.938	0/0:28:28,0:28:956:0:0:0,-8.42884,-86.3462	0/0:567:565,0:565:19651:0:0:0,-170.082,-1767.91	0/0:172:171,0:171:5921:0:0:0,-51.4761,-532.766	0/0:12:12,0:12:419:0:0:0,-3.61236,-38.043	0/0:31:31,0:31:1091:0:0:0,-9.33193,-98.4988	0/0:203:202,1:202:7071:1:36:0,-57.5108,-632.864	0/0:207:205,2:205:7227:2:72:0,-55.4765,-643.66	0/1:9:3,6:3:105:6:209:-16.4412,0,-7.0867	0/1:449:235,214:235:8230:214:7493:-538.904,0,-605.191	0/0:379:373,6:373:13036:6:201:0,-95.6733,-1154.67	0/1:142:91,51:91:3179:51:1806:-120.074,0,-243.589	0/1:265:133,132:133:4676:132:4622:-335.885,0,-340.872	0/0:419:411,8:411:14327:8:283:0,-100.319,-1263.41	0/1:209:80,128:80:2827:128:4430:-335.814,0,-191.859	0/0:56:55,1:55:1935:1:33:0,-13.5585,-171.127	0/0:182:182,0:182:6359:0:0:0,-54.7875,-572.413	0/0:188:187,0:187:6536:0:0:0,-56.2926,-587.974	0/1:20:7,13:7:247:13:451:-34.8981,0,-16.5523	0/0:171:170,1:170:5867:1:36:0,-47.8779,-524.556	0/1:137:79,58:79:2742:58:2077:-145.36,0,-205.781	0/0:448:447,0:447:15612:0:0:0,-134.56,-1404.47	0/1:369:189,179:189:6652:179:6350:-460.522,0,-487.718	0/1:282:175,107:175:6122:107:3793:-256.674,0,-466.197	0/0:274:274,0:274:9643:0:0:0,-82.4822,-867.837	0/0:17:17,0:17:574:0:0:0,-5.11751,-51.9765	0/0:285:285,0:285:10064:0:0:0,-85.7935,-905.709	0/0:449:448,1:448:15741:1:36:0,-131.564,-1412.71	0/0:478:478,0:478:16760:0:0:0,-143.892,-1508.05	0/1:198:98,98:98:3444:98:3448:-251.2,0,-250.839	0/0:119:119,0:119:4196:0:0:0,-35.8226,-377.826	0/1:177:107,70:107:3676:70:2447:-167.185,0,-277.765	0/1:252:130,121:130:4583:121:4263:-307.937,0,-336.722	0/1:65:46,19:46:1594:19:682:-41.9857,0,-124.035	0/1:104:69,34:69:2425:34:1201:-77.0266,0,-187.14	0/1:83:55,28:55:1926:28:990:-64.4273,0,-148.63	0/1:85:36,49:36:1262:49:1722:-129.676,0,-88.2929	0/1:155:86,68:86:3046:68:2393:-168.909,0,-227.652	0/1:110:41,69:41:1436:69:2449:-187.193,0,-96.0625	0/0:286:285,1:285:9946:1:36:0,-82.4963,-891.503	0/0:243:243,0:243:857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chr06	31338233	.	C	T	377184	PASS	AB=0.502199;ABP=3.41148;AC=138;AF=0.734043;AN=188;AO=13951;CIGAR=1X;DP=18723;DPB=18723;DPRA=0;EPP=29589.2;EPPR=10093.4;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.9925;MQMR=59.9845;NS=94;NUMALT=1;ODDS=7.14864;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=497046;QR=168945;RO=4770;RPL=6424;RPP=192.375;RPPR=109.652;RPR=7527;RUN=1;SAF=6502;SAP=142.599;SAR=7449;SRF=2172;SRP=85.6246;SRR=2598;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:41,40:41:1427:40:1425:-104.162,0,-104.339	0/1:275:138,137:138:4869:137:4886:-357.107,0,-355.581	0/1:228:136,92:136:4818:92:3260:-224.986,0,-365.142	1/1:471:2,469:2:72:469:16794:-1504.27,-134.948,0	1/1:67:0,67:0:0:67:2408:-216.976,-20.169,0	1/1:51:0,51:0:0:51:1820:-164.081,-15.3525,0	1/1:283:1,282:1:36:282:10068:-902.458,-81.5932,0	0/1:392:210,182:210:7479:182:6482:-465.465,0,-554.13	1/1:263:0,263:0:0:263:9332:-839.85,-79.1709,0	0/1:272:144,128:144:5093:128:4575:-330.035,0,-376.629	0/1:135:66,69:66:2287:69:2453:-180.385,0,-165.449	1/1:233:0,233:0:0:233:8259:-743.327,-70.14,0	1/1:191:1,190:1:36:190:6807:-609.102,-53.8985,0	0/1:170:73,97:73:2568:97:3462:-260.617,0,-179.638	0/1:195:104,91:104:3672:91:3256:-234.56,0,-271.982	1/1:166:1,165:1:36:165:5869:-524.722,-46.3727,0	1/1:169:0,169:0:0:169:6005:-540.559,-50.8741,0	1/1:162:0,162:0:0:162:5778:-520.135,-48.7669,0	0/1:86:30,56:30:1048:56:1987:-153.215,0,-68.7388	1/1:386:1,385:1:36:385:13702:-1229.32,-112.599,0	1/1:231:1,230:1:36:230:8161:-730.888,-65.9397,0	1/1:91:0,91:0:0:91:3250:-292.72,-27.3937,0	0/1:158:74,84:74:2638:84:2981:-220.958,0,-190.103	1/1:206:0,206:0:0:206:7324:-659.213,-62.0122,0	0/1:143:80,63:80:2823:63:2235:-158.366,0,-211.261	0/1:547:245,302:245:8691:302:10729:-800.857,0,-617.525	0/1:438:203,235:203:7230:235:8361:-620.648,0,-518.904	0/1:68:34,34:34:1216:34:1224:-89.997,0,-89.2765	0/1:506:250,256:250:8896:256:9140:-670.254,0,-648.305	0/1:203:109,94:109:3883:94:3368:-242.227,0,-288.557	0/1:263:123,140:123:4324:140:5008:-371.697,0,-310.166	0/1:13:8,5:8:279:5:180:-12.6387,0,-21.5341	0/1:29:12,17:12:432:17:604:-45.9607,0,-30.4913	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:20:2,18:2:72:18:644:-52.27,0,-0.816122	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:474:1,473:1:36:473:16892:-1516.32,-139.09,0	0/1:214:99,115:99:3523:115:4088:-303.687,0,-252.86	0/1:147:78,69:78:2772:69:2465:-177.853,0,-205.468	0/1:4:3,1:3:99:1:32:-1.99519,0,-8.03246	0/1:272:130,142:130:4577:142:5078:-375.284,0,-330.216	0/1:73:36,37:36:1280:37:1320:-97.1268,0,-93.528	0/1:263:124,138:124:4411:138:4905:-362.414,0,-317.972	0/1:178:80,98:80:2841:98:3520:-263.425,0,-202.345	1/1:175:0,175:0:0:175:6247:-562.325,-52.6803,0	1/1:180:0,180:0:0:180:6377:-574.02,-54.1854,0	0/1:196:69,127:69:2460:127:4498:-345.987,0,-162.653	1/1:328:2,326:2:72:326:11626:-1039.37,-91.9011,0	0/1:258:142,116:142:5009:116:4139:-295.026,0,-373.293	0/1:276:123,153:123:4367:153:5424:-405.207,0,-310.12	1/1:364:0,364:0:0:364:12892:-1160.1,-109.575,0	0/1:42:16,26:16:559:26:932:-71.5556,0,-37.9943	1/1:208:0,208:0:0:208:7401:-666.137,-62.6142,0	1/1:110:0,110:0:0:110:3894:-350.654,-33.1133,0	1/1:38:0,38:0:0:38:1357:-122.429,-11.4391,0	1/1:220:0,220:0:0:220:7833:-704.998,-66.2266,0	1/1:107:1,106:1:36:106:3754:-334.461,-28.6119,0	1/1:31:1,30:1:36:30:1072:-93.1942,-5.73366,0	1/1:40:0,40:0:0:40:1423:-128.367,-12.0412,0	0/1:180:97,83:97:3464:83:2961:-212.538,0,-257.787	1/1:252:2,250:2:63:250:8925:-797.251,-69.8764,0	0/1:13:5,8:5:180:8:280:-21.6259,0,-12.6387	0/1:317:142,174:142:5024:174:6177:-460.546,0,-356.823	1/1:375:1,374:1:36:374:13357:-1198.33,-109.288,0	0/1:178:79,99:79:2803:99:3520:-263.425,0,-198.925	0/1:176:80,96:80:2835:96:3386:-251.972,0,-202.406	1/1:265:2,263:2:72:263:9419:-840.834,-72.9362,0	0/1:181:118,63:118:4173:63:2247:-148.006,0,-321.264	1/1:91:0,91:0:0:91:3251:-292.811,-27.3937,0	1/1:107:0,107:0:0:107:3813:-343.367,-32.2102,0	1/1:184:0,184:0:0:184:6526:-587.426,-55.3895,0	0/1:64:41,23:41:1464:23:804:-53.4106,0,-112.79	1/1:246:0,246:0:0:246:8774:-789.653,-74.0534,0	0/1:187:104,83:104:3663:83:2942:-208.72,0,-273.583	1/1:361:0,361:0:0:361:12866:-1157.76,-108.672,0	0/1:354:194,160:194:6890:160:5713:-407.723,0,-513.604	0/1:96:45,51:45:1608:51:1821:-135.271,0,-116.111	1/1:329:2,327:2:72:327:11678:-1044.05,-92.2021,0	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:279:0,279:0:0:279:9954:-895.802,-83.9874,0	1/1:191:0,191:0:0:191:6811:-613.064,-57.4967,0	1/1:486:0,486:0:0:486:17283:-1555.11,-146.301,0	0/1:177:90,87:90:3176:87:3115:-227.294,0,-232.783	1/1:204:0,204:0:0:204:7292:-656.33,-61.4101,0	0/1:200:114,86:114:4016:86:3065:-215.872,0,-301.419	0/1:341:176,165:176:6222:165:5924:-430.615,0,-457.431	0/1:72:25,47:25:883:47:1664:-128.371,0,-58.1133	0/1:162:79,83:79:2832:83:2955:-217.417,0,-206.352	0/1:153:79,74:79:2755:74:2656:-193.038,0,-202.133	0/1:127:78,49:78:2722:49:1737:-118.382,0,-206.99	0/1:208:90,118:90:3175:118:4159:-311.881,0,-223.36	0/1:217:133,84:133:4742:84:3011:-205.897,0,-361.616	1/1:195:0,195:0:0:195:6953:-625.835,-58.7009,0	1/1:280:0,280:0:0:280:9953:-895.714,-84.2884,0
chr06	31564482	.	A	C	56564.7	PASS	AB=0.485259;ABP=15.5583;AC=46;AF=0.244681;AN=188;AO=3244;CIGAR=1X;DP=13104;DPB=13104;DPRA=1.15788;EPP=6427.47;EPPR=18919.4;GTI=0;LEN=1;MEANALT=1.01818;MQM=59.9812;MQMR=59.9973;NS=94;NUMALT=1;ODDS=2.58999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=115417;QR=353367;RO=9856;RPL=73;RPP=6427.47;RPPR=18919.4;RPR=3171;RUN=1;SAF=3244;SAP=7047.27;SAR=0;SRF=9856;SRP=21405;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:46:19,27:19:665:27:957:-72.5975,0,-46.325	0/1:221:112,109:112:4001:109:3890:-283.766,0,-293.751	0/1:141:57,84:57:2048:84:2999:-227.696,0,-142.146	0/0:187:186,1:186:6680:1:36:0,-52.6943,-597.676	0/0:110:109,1:109:3896:1:36:0,-29.515,-347.236	0/0:103:103,0:103:3677:0:0:0,-31.0061,-331.132	0/0:126:126,0:126:4508:0:0:0,-37.9298,-405.889	0/1:215:109,106:109:3908:106:3746:-272.62,0,-287.191	0/0:152:152,0:152:5449:0:0:0,-45.7566,-490.536	0/1:181:105,76:105:3768:76:2720:-190.557,0,-284.832	0/1:115:63,52:63:2264:52:1839:-131.17,0,-169.404	0/0:105:105,0:105:3780:0:0:0,-31.6081,-340.397	0/0:83:83,0:83:2980:0:0:0,-24.9855,-268.432	0/1:132:68,64:68:2448:64:2283:-165.995,0,-180.838	0/1:94:45,49:45:1612:49:1756:-130.027,0,-117.073	0/0:90:90,0:90:3232:0:0:0,-27.0927,-291.101	0/0:124:124,0:124:4460:0:0:0,-37.3277,-401.568	0/0:97:97,0:97:3471:0:0:0,-29.1999,-312.601	0/1:54:24,30:24:864:30:1076:-80.8972,0,-61.8269	0/0:242:242,0:242:8676:0:0:0,-72.8493,-780.831	0/0:205:205,0:205:7368:0:0:0,-61.7111,-663.164	0/0:85:85,0:85:3033:0:0:0,-25.5875,-273.199	0/1:125:65,60:65:2328:60:2098:-151.458,0,-172.151	0/0:177:177,0:177:6318:0:0:0,-53.2823,-568.71	0/1:113:46,67:46:1656:67:2400:-182.236,0,-115.312	0/0:438:438,0:438:15724:0:0:0,-131.851,-1414.85	0/1:297:159,138:159:5685:138:4901:-351.834,0,-422.357	0/1:69:39,30:39:1404:30:1061:-75.0283,0,-105.888	0/1:322:171,151:171:6136:151:5353:-384.974,0,-455.406	0/1:347:196,151:196:7040:151:5357:-377.804,0,-529.201	0/1:198:74,124:74:2644:124:4403:-336.841,0,-178.603	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:254:254,0:254:9124:0:0:0,-76.4616,-821.129	0/1:284:148,136:148:5312:136:4836:-349.903,0,-392.72	0/1:109:58,51:58:2084:51:1814:-130.728,0,-155.018	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:170:100,70:100:3592:70:2482:-172.458,0,-272.311	0/1:53:25,28:25:900:28:985:-73.0069,0,-65.3664	0/1:177:106,71:106:3785:71:2531:-174.758,0,-287.565	0/1:145:60,85:60:2156:85:3024:-228.74,0,-150.658	0/0:89:88,1:88:3160:1:36:0,-23.1934,-281.026	0/0:100:100,0:100:3573:0:0:0,-30.103,-321.776	0/1:192:112,79:112:4008:79:2828:-196.902,0,-303.053	0/0:250:246,4:246:8844:4:144:0,-61.9439,-782.626	0/1:110:56,54:56:2012:54:1940:-141.763,0,-148.24	0/1:311:167,144:167:5972:144:5141:-369.21,0,-443.967	0/0:125:125,0:125:4492:0:0:0,-37.6287,-404.447	0/1:17:7,10:7:252:10:360:-27.6268,0,-17.9114	0/0:168:168,0:168:6013:0:0:0,-50.573,-541.273	0/0:78:78,0:78:2784:0:0:0,-23.4803,-250.801	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.455	0/0:170:170,0:170:6088:0:0:0,-51.1751,-548.021	0/0:84:84,0:84:3024:0:0:0,-25.2865,-272.389	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:154:90,64:90:3206:64:2296:-160.542,0,-242.402	0/0:142:142,0:142:5100:0:0:0,-42.7463,-459.141	0/1:15:3,12:3:108:12:423:-33.8896,0,-5.55972	0/1:237:117,120:117:4193:120:4261:-312.326,0,-306.205	0/0:258:254,4:254:9093:4:144:0,-64.3521,-805.03	0/1:119:73,46:73:2620:46:1636:-111.706,0,-200.225	0/1:103:46,57:46:1648:57:2000:-149.231,0,-117.599	0/0:251:249,2:249:8917:2:72:0,-68.7218,-795.674	0/0:167:167,0:167:6004:0:0:0,-50.272,-540.462	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.236	0/0:92:89,3:89:3196:3:108:0,-17.6196,-277.787	0/0:109:108,1:108:3876:1:36:0,-29.214,-345.436	0/1:59:29,30:29:1040:30:1059:-77.8597,0,-76.1536	0/0:155:154,0:154:5517:0:0:0,-46.3586,-496.293	0/1:123:50,73:50:1792:73:2604:-197.582,0,-124.536	0/0:306:306,0:306:10956:0:0:0,-92.1152,-985.937	0/1:224:114,110:114:4073:110:3931:-286.552,0,-299.325	0/1:283:143,140:143:5121:140:4978:-362.978,0,-375.839	0/0:205:205,0:205:7353:0:0:0,-61.7111,-661.815	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/0:133:132,1:132:4721:1:36:0,-36.4387,-421.45	0/0:153:153,0:153:5491:0:0:0,-46.0576,-494.314	0/0:269:267,0:267:9528:0:0:0,-80.375,-857.142	0/1:114:63,51:63:2264:51:1809:-128.772,0,-169.705	0/0:113:113,0:113:4060:0:0:0,-34.0164,-365.586	0/1:144:65,79:65:2340:79:2808:-209.613,0,-167.511	0/1:203:110,93:110:3956:93:3309:-236.915,0,-295.116	0/1:57:33,24:33:1188:24:851:-59.7507,0,-90.0699	0/1:129:69,60:69:2476:60:2147:-154.664,0,-184.261	0/1:92:51,41:51:1836:41:1468:-104.721,0,-137.826	0/1:114:54,60:54:1940:60:2144:-158.91,0,-140.559	0/1:133:76,57:76:2732:57:2005:-140.685,0,-206.085	0/1:92:35,57:35:1256:57:2044:-156.537,0,-85.6505	0/0:149:149,0:149:5348:0:0:0,-44.8535,-481.451	0/0:143:143,0:143:5128:0:0:0,-43.0473,-461.661
chr06	31577783	.	TCGC	ACGT	18916.8	PASS	AB=0.46529;ABP=26.8278;AC=43;AF=0.228723;AN=188;AO=1118;CIGAR=1X2M1X;DP=5068;DPB=5088;DPRA=0.949981;EPP=2422.04;EPPR=5006.02;GTI=3;LEN=4;MEANALT=1.17021;MQM=59.4964;MQMR=59.9919;NS=94;NUMALT=1;ODDS=2.18845;PAIRED=0;PAIREDR=0;PAO=81;PQA=2868;PQR=0;PRO=0;QA=39259;QR=138430;RO=3935;RPL=30;RPP=2177.13;RPPR=5019.32;RPR=1088;RUN=1;SAF=29;SAP=2185.36;SAR=1089;SRF=2;SRP=8530.39;SRR=3933;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:6:4,2:4:140:2:66:-4.45808,0,-11.1384	0/1:17:5,12:5:173:12:408:-31.9229,0,-10.7918	0/1:36:12,24:12:418:24:845:-65.5317,0,-27.115	0/0:31:31,0:31:1066:0:0:0,-9.33193,-96.2436	0/0:17:17,0:17:591:0:0:0,-5.11751,-53.5155	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:13:13,0:13:451:0:0:0,-3.91339,-40.9202	0/1:37:8,29:8:283:29:1025:-81.232,0,-14.6743	0/0:18:18,0:18:640:0:0:0,-5.41854,-57.9296	0/1:29:7,22:7:251:22:792:-62.5113,0,-13.8485	0/1:125:101,24:101:3592:24:856:-39.7299,0,-285.861	0/0:74:74,0:74:2575:0:0:0,-22.2762,-232	0/0:57:57,0:57:2001:0:0:0,-17.1587,-180.362	0/1:39:17,22:17:585:22:764:-57.3307,0,-41.2329	0/1:60:23,37:23:823:37:1306:-99.7763,0,-56.3317	0/0:63:63,0:63:2234:0:0:0,-18.9649,-201.324	0/0:24:24,0:24:849:0:0:0,-7.22472,-76.7296	0/0:19:19,0:19:681:0:0:0,-5.71957,-61.6196	0/1:87:76,11:76:2696:11:394:-9.6119,0,-216.696	0/0:24:24,0:24:852:0:0:0,-7.22472,-77.0002	0/0:20:20,0:20:713:0:0:0,-6.0206,-64.4972	0/0:9:9,0:9:306:0:0:0,-2.70927,-27.8688	0/1:28:9,19:9:321:19:661:-51.3808,0,-20.8046	0/0:11:11,0:11:377:0:0:0,-3.31133,-34.2593	0/1:12:8,4:8:286:4:138:-9.14745,0,-22.4732	0/0:30:30,0:30:1054:0:0:0,-9.0309,-95.1705	0/1:58:12,46:12:407:46:1598:-126.502,0,-19.4956	0/1:42:17,23:17:579:23:814:-61.2133,0,-40.062	0/1:65:11,54:11:391:54:1914:-152.612,0,-15.6075	0/1:36:6,30:6:210:30:1049:-83.88,0,-8.40462	0/1:30:8,22:8:279:22:767:-60.305,0,-16.4175	0/0:73:73,0:73:2571:0:0:0,-21.9752,-231.641	0/0:142:142,0:142:5032:0:0:0,-42.7463,-453.031	0/0:133:133,0:133:4649:0:0:0,-40.037,-418.575	0/0:122:122,0:122:4279:0:0:0,-36.7257,-385.292	0/0:192:192,0:192:6763:0:0:0,-57.7978,-608.757	0/0:114:114,0:114:4032:0:0:0,-34.3174,-363.071	0/1:19:4,15:4:132:15:521:-41.4899,0,-6.48644	0/1:96:70,26:70:2481:26:909:-53.2138,0,-194.645	0/0:28:28,0:28:990:0:0:0,-8.42884,-89.4133	0/1:51:15,35:15:537:35:1228:-95.4738,0,-33.3198	0/1:80:67,13:67:2374:13:456:-17.2904,0,-189.835	0/1:21:7,14:7:250:14:496:-38.6428,0,-16.5251	0/1:61:28,33:28:971:33:1170:-87.2351,0,-69.3384	0/0:47:47,0:47:1656:0:0:0,-14.1484,-149.327	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:32:19,11:19:657:11:394:-26.4111,0,-50.0624	0/0:20:20,0:20:679:0:0:0,-6.0206,-61.4264	0/1:24:4,20:4:144:20:710:-56.8945,0,-6.0889	0/1:50:10,40:10:348:40:1411:-112.232,0,-16.6032	0/0:10:10,0:10:357:0:0:0,-3.0103,-32.4723	0/0:33:32,1:32:1126:1:36:0,-6.33571,-98.0496	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:39:39,0:39:1354:0:0:0,-11.7402,-122.157	0/0:19:19,0:19:668:0:0:0,-5.71957,-60.4446	0/0:10:10,0:10:338:0:0:0,-3.0103,-30.7461	0/0:114:114,0:114:4010:0:0:0,-34.3174,-361.094	0/0:32:32,0:32:1114:0:0:0,-9.63296,-100.566	0/1:33:16,17:16:571:17:599:-44.3049,0,-41.7891	0/0:43:43,0:43:1513:0:0:0,-12.9443,-136.462	0/0:41:41,0:41:1439:0:0:0,-12.3422,-129.805	0/1:103:41,61:41:1430:61:2147:-162.38,0,-97.9383	0/0:21:19,2:19:663:2:66:0,-0.0536805,-53.7259	0/1:20:6,14:6:214:14:503:-39.5871,0,-13.5872	0/1:22:13,9:13:458:9:317:-22.2463,0,-34.9318	0/0:32:31,1:31:1065:1:30:0,-6.63339,-93.1565	0/0:34:33,1:33:1175:1:29:0,-7.34578,-103.168	0/0:337:335,0:335:11794:0:0:0,-100.845,-1060.95	0/0:20:20,0:20:694:0:0:0,-6.0206,-62.7799	0/0:23:23,0:23:807:0:0:0,-6.92369,-72.9501	0/1:41:35,6:35:1210:6:212:-7.08257,0,-96.8581	0/0:12:12,0:12:403:0:0:0,-3.61236,-36.5919	1/1:57:4,53:4:138:53:1853:-154.266,-4.39854,0	0/0:16:15,1:15:536:1:36:0,-1.2182,-44.9769	0/1:82:11,71:11:396:71:2491:-199.752,0,-11.2983	0/1:12:4,8:4:143:8:281:-22.0176,0,-9.60908	0/0:15:15,0:15:527:0:0:0,-4.51545,-47.7607	0/0:192:191,0:191:6752:0:0:0,-57.4967,-607.552	0/0:20:19,0:19:673:0:0:0,-5.71957,-60.5373	0/0:15:15,0:15:535:0:0:0,-4.51545,-48.4847	0/0:25:25,0:25:881:0:0:0,-7.52575,-79.6072	0/1:29:17,12:17:607:12:424:-29.7641,0,-46.2319	0/0:59:59,0:59:2075:0:0:0,-17.7608,-187.018	0/1:47:23,24:23:796:24:846:-62.3047,0,-57.8088	0/1:109:43,66:43:1509:66:2320:-175.865,0,-103.291	0/1:18:11,7:11:388:7:248:-17.2458,0,-29.8388	0/1:47:17,30:17:603:30:1052:-80.8243,0,-40.4519	0/1:57:20,35:20:706:35:1221:-93.2411,0,-46.9493	0/1:193:172,20:172:6085:20:679:-3.40189,0,-489.749	0/1:252:214,37:214:7502:37:1308:-42.0959,0,-599.32	0/1:70:16,54:16:563:54:1869:-147.412,0,-29.9276	0/0:158:158,0:158:5547:0:0:0,-47.5627,-499.366	0/0:90:89,0:89:3112:0:0:0,-26.7917,-279.951
chr06	31609457	.	T	C	19740.3	PASS	AB=0.478244;ABP=13.5926;AC=46;AF=0.244681;AN=188;AO=1242;CIGAR=1X;DP=5625;DPB=5625;DPRA=1.11423;EPP=2699.98;EPPR=9514.06;GTI=0;LEN=1;MEANALT=1.0566;MQM=59.9501;MQMR=59.9744;NS=94;NUMALT=1;ODDS=2.70654;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=43949;QR=155602;RO=4380;RPL=0;RPP=2699.98;RPPR=9505.38;RPR=1242;RUN=1;SAF=0;SAP=2699.98;SAR=1242;SRF=1;SRP=9505.38;SRR=4379;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:49:32,17:32:1136:17:591:-38.7648,0,-87.7984	0/1:45:28,17:28:987:17:603:-41.0538,0,-75.5967	0/1:80:44,36:44:1568:36:1259:-89.5271,0,-117.329	0/0:99:98,1:98:3483:1:36:0,-26.2037,-310.085	0/0:50:50,0:50:1771:0:0:0,-15.0515,-159.672	0/0:36:34,2:34:1224:2:72:0,-4.00036,-103.63	0/0:66:66,0:66:2334:0:0:0,-19.868,-210.319	0/1:53:25,28:25:872:28:977:-72.2856,0,-62.839	0/0:78:78,0:78:2761:0:0:0,-23.4803,-248.732	0/1:57:29,28:29:1032:28:985:-71.8028,0,-76.0348	0/1:36:22,14:22:784:14:500:-34.4991,0,-60.0468	0/0:98:98,0:98:3500:0:0:0,-29.5009,-315.211	0/0:67:67,0:67:2385:0:0:0,-20.169,-214.906	0/1:49:19,30:19:680:30:1055:-80.5096,0,-46.7787	0/1:62:37,25:37:1320:25:880:-60.8538,0,-100.438	0/0:56:56,0:56:1984:0:0:0,-16.8577,-178.835	0/0:27:27,0:27:959:0:0:0,-8.12781,-86.6254	0/0:26:26,0:26:920:0:0:0,-7.82678,-83.1171	0/1:30:14,16:14:491:16:568:-42.421,0,-35.4902	0/0:111:111,0:111:3882:0:0:0,-33.4143,-349.574	0/0:77:77,0:77:2709:0:0:0,-23.1793,-244.055	0/0:74:74,0:74:2613:0:0:0,-22.2762,-235.418	0/1:89:52,37:52:1849:37:1315:-91.8594,0,-139.896	0/0:48:48,0:48:1705:0:0:0,-14.4494,-153.734	0/1:75:41,34:41:1472:34:1211:-86.7183,0,-110.199	0/0:152:152,0:152:5415:0:0:0,-45.7566,-487.483	0/1:77:47,29:47:1654:29:1025:-69.3228,0,-125.906	0/1:19:5,14:5:180:14:495:-39.1635,0,-10.8325	0/1:123:48,75:48:1716:75:2645:-201.268,0,-117.699	0/1:66:47,19:47:1676:19:672:-40.9375,0,-131.259	0/1:54:40,14:40:1428:14:500:-29.0806,0,-112.562	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6906	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:186:185,1:185:6564:1:32:0,-52.7923,-587.648	0/1:87:48,39:48:1699:39:1396:-99.7495,0,-127.006	0/1:36:14,22:14:504:22:772:-58.9634,0,-34.861	0/1:10:6,4:6:212:4:144:-10.3033,0,-16.4145	0/1:139:76,62:76:2704:62:2203:-156.633,0,-201.703	0/1:23:12,11:12:428:11:388:-28.3337,0,-31.9351	0/1:76:43,33:43:1536:33:1157:-81.5559,0,-115.652	0/1:40:18,22:18:635:22:788:-59.2036,0,-45.4358	0/0:44:44,0:44:1559:0:0:0,-13.2453,-140.601	0/0:69:69,0:69:2453:0:0:0,-20.7711,-221.023	0/1:79:36,43:36:1292:43:1527:-113.942,0,-92.8024	0/0:89:88,1:88:3124:1:32:0,-23.5924,-278.151	0/1:58:36,22:36:1284:22:775:-52.6109,0,-98.4037	0/1:49:33,16:33:1171:16:576:-37.4245,0,-90.9462	0/0:74:74,0:74:2656:0:0:0,-22.2762,-238.096	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/0:130:130,0:130:4619:0:0:0,-39.1339,-415.877	0/0:52:52,0:52:1818:0:0:0,-15.6536,-163.897	0/0:14:14,0:14:481:0:0:0,-4.21442,-43.6151	0/0:83:83,0:83:2939:0:0:0,-24.9855,-264.743	0/0:21:21,0:21:736:0:0:0,-6.32163,-66.5339	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:14:14,0:14:496:0:0:0,-4.21442,-44.9743	0/1:49:23,26:23:828:26:928:-69.0878,0,-60.0936	0/0:84:84,0:84:2996:0:0:0,-25.2865,-269.873	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:99:37,62:37:1315:62:2201:-168.552,0,-88.8491	0/0:77:77,0:77:2745:0:0:0,-23.1793,-246.921	0/1:50:30,20:30:1064:20:716:-49.7162,0,-81.0202	0/1:35:19,16:19:680:16:563:-40.4631,0,-50.9931	0/0:105:104,1:104:3654:1:36:0,-28.0099,-325.466	0/0:127:125,2:125:4453:2:72:0,-31.3941,-394.104	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6706	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:34:34,0:34:1191:0:0:0,-10.235,-107.494	0/1:12:7,5:7:248:5:176:-12.5727,0,-19.0518	0/0:120:120,0:120:4265:0:0:0,-36.1236,-384.03	0/1:43:24,19:24:845:19:671:-47.7715,0,-63.4228	0/0:104:101,3:101:3600:3:108:0,-21.2319,-314.133	0/1:69:40,29:40:1432:29:1040:-73.1433,0,-108.407	0/1:82:46,36:46:1624:36:1288:-91.5391,0,-121.764	0/0:40:40,0:40:1401:0:0:0,-12.0412,-126.385	0/0:19:19,0:19:671:0:0:0,-5.71957,-60.7158	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/0:76:76,0:76:2699:0:0:0,-22.8783,-243.148	0/0:114:114,0:114:4072:0:0:0,-34.3174,-366.668	0/1:63:30,33:30:1080:33:1158:-85.5601,0,-78.5484	0/0:55:55,0:55:1943:0:0:0,-16.5566,-175.146	0/1:52:30,22:30:1072:22:772:-54.1477,0,-81.1389	0/1:101:40,61:40:1432:61:2159:-164.17,0,-98.7736	0/1:17:9,8:9:324:8:284:-20.7858,0,-24.3883	0/1:48:20,28:20:708:28:980:-73.8314,0,-49.5962	0/1:50:30,20:30:1080:20:707:-48.9031,0,-82.4618	0/1:47:21,26:21:748:26:917:-68.6962,0,-53.4969	0/1:95:59,35:59:2112:35:1244:-83.6081,0,-161.692	0/1:80:16,64:16:572:64:2246:-178.25,0,-27.731	0/0:22:22,0:22:769:0:0:0,-6.62266,-69.5286	0/0:67:67,0:67:2391:0:0:0,-20.169,-215.447
chr06	31693059	.	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chr06	32009326	.	C	T	28724.5	PASS	AB=0.502214;ABP=3.15455;AC=47;AF=0.25;AN=188;AO=1723;CIGAR=1X;DP=6681;DPB=6681;DPRA=1.21239;EPP=3744.46;EPPR=10762.7;GTI=0;LEN=1;MEANALT=1.01695;MQM=59.9861;MQMR=59.9927;NS=94;NUMALT=1;ODDS=4.49909;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61729;QR=177039;RO=4955;RPL=0;RPP=3744.46;RPPR=10762.7;RPR=1723;RUN=1;SAF=1723;SAP=3744.46;SAR=0;SRF=4955;SRP=10762.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:24,27:24:860:27:968:-72.0848,0,-62.3693	0/1:41:20,21:20:711:21:748:-55.3025,0,-51.9734	0/1:257:100,157:100:3563:157:5636:-429.977,0,-243.514	0/0:161:161,0:161:5756:0:0:0,-48.4658,-518.157	0/0:85:83,2:83:2976:2:68:0,-19.1298,-261.615	0/0:53:52,1:52:1864:1:36:0,-12.3563,-164.441	0/0:66:64,2:64:2280:2:72:0,-13.0313,-198.626	0/1:112:61,51:61:2184:51:1836:-131.805,0,-163.111	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:96:41,55:41:1464:55:1962:-147.955,0,-103.157	0/1:64:32,32:32:1139:32:1147:-84.2737,0,-83.5525	0/0:132:132,0:132:4706:0:0:0,-39.736,-423.701	0/0:62:62,0:62:2207:0:0:0,-18.6639,-198.895	0/1:30:8,22:8:288:22:788:-62.2077,0,-17.2365	0/1:63:27,36:27:964:36:1296:-97.979,0,-68.1119	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.328	0/0:51:51,0:51:1819:0:0:0,-15.3525,-163.991	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/1:36:15,21:15:540:21:752:-57.1646,0,-38.0995	0/1:90:47,43:47:1688:43:1548:-112.52,0,-125.114	0/0:81:80,1:80:2848:1:36:0,-20.7852,-252.961	0/0:114:114,0:114:4088:0:0:0,-34.3174,-368.105	0/1:43:28,15:28:1008:15:535:-35.5403,0,-78.0921	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/1:86:30,56:30:1068:56:2016:-155.824,0,-70.5435	0/0:140:139,1:139:4956:1:36:0,-38.5459,-442.594	0/1:173:96,77:96:3405:77:2760:-196.563,0,-254.587	0/1:28:13,15:13:468:15:536:-40.146,0,-34.0308	0/1:164:80,84:80:2848:84:2997:-220.592,0,-207.19	0/1:75:52,23:52:1848:23:824:-51.9061,0,-144.023	0/1:55:22,33:22:780:33:1184:-90.3117,0,-53.9664	0/1:24:20,4:20:712:4:144:-6.0889,0,-57.1819	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/0:24:24,0:24:841:0:0:0,-7.22472,-76.0064	0/1:142:88,54:88:3144:54:1927:-130.96,0,-240.44	0/0:95:94,0:94:3360:0:0:0,-28.2968,-302.257	0/1:57:30,27:30:1068:27:972:-70.6392,0,-79.2734	0/1:7:5,2:5:176:2:72:-4.72951,0,-14.0778	0/1:94:48,46:48:1712:46:1638:-119.411,0,-126.069	0/1:31:18,13:18:644:13:468:-33.1277,0,-48.9587	0/1:162:72,90:72:2579:90:3224:-241.615,0,-183.592	0/1:49:26,23:26:932:23:824:-59.7328,0,-69.4484	0/0:51:51,0:51:1819:0:0:0,-15.3525,-163.991	0/0:77:77,0:77:2768:0:0:0,-23.1793,-249.361	0/1:115:56,59:56:2000:59:2112:-155.731,0,-145.655	0/0:103:103,0:103:3653:0:0:0,-31.0061,-328.975	0/1:64:27,37:27:968:37:1328:-100.556,0,-68.1714	0/1:78:48,30:48:1724:30:1080:-74.0329,0,-131.965	0/0:71:71,0:71:2539:0:0:0,-21.3731,-228.76	0/1:10:6,4:6:216:4:140:-9.93428,0,-16.7802	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.303	0/1:21:12,9:12:432:9:324:-23.1842,0,-32.8996	0/1:17:13,4:13:468:4:144:-8.19611,0,-37.3421	0/0:97:97,0:97:3464:0:0:0,-29.1999,-311.971	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/1:39:23,16:23:824:16:557:-38.7163,0,-62.7431	0/0:73:72,1:72:2571:1:32:0,-18.7759,-228.44	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/0:148:147,1:147:5264:1:36:0,-40.9542,-470.298	0/0:133:126,6:126:4496:6:216:0,-20.3053,-384.393	0/1:52:31,21:31:1112:21:756:-52.7137,0,-84.7378	0/1:82:35,47:35:1260:47:1672:-126.083,0,-89.021	0/0:101:98,3:98:3500:3:108:0,-20.3289,-305.136	0/0:84:84,0:84:2992:0:0:0,-25.2865,-269.513	0/0:37:37,0:37:1323:0:0:0,-11.1381,-119.371	0/0:58:58,0:58:2060:0:0:0,-17.4597,-185.672	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/1:30:20,10:20:708:10:360:-23.7134,0,-55.0147	0/0:114:113,0:113:4023:0:0:0,-34.0164,-362.049	0/1:50:20,30:20:712:30:1080:-82.4618,0,-49.3552	0/0:107:107,0:107:3816:0:0:0,-32.2102,-343.639	0/1:128:64,64:64:2296:64:2281:-167.018,0,-168.369	0/1:196:71,125:71:2548:125:4484:-344.726,0,-170.568	0/0:51:51,0:51:1828:0:0:0,-15.3525,-164.801	0/0:25:25,0:25:884:0:0:0,-7.52575,-79.8784	0/0:75:73,2:73:2608:2:72:0,-15.7405,-228.132	0/0:102:102,0:102:3640:0:0:0,-30.7051,-327.804	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.318	0/1:42:17,25:17:612:25:892:-67.9564,0,-42.7702	0/0:49:48,1:48:1712:1:36:0,-11.1522,-150.767	0/1:40:27,13:27:972:13:468:-30.4184,0,-75.7567	0/1:106:58,48:58:2076:48:1728:-123.896,0,-155.201	0/1:26:15,11:15:519:11:396:-28.156,0,-39.2099	0/1:55:33,22:33:1184:22:792:-55.049,0,-90.3117	0/0:60:60,0:60:2144:0:0:0,-18.0618,-193.228	0/1:50:30,20:30:1080:20:720:-50.0773,0,-82.4618	0/1:95:47,48:47:1683:48:1717:-126.217,0,-123.158	0/1:51:25,26:25:892:26:932:-68.8463,0,-65.2472	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/0:95:94,1:94:3363:1:36:0,-24.9996,-299.288
chr06	32009331	.	C	T	103181	PASS	AB=0.493464;ABP=4.25925;AC=141;AF=0.75;AN=188;AO=4939;CIGAR=1X;DP=6664;DPB=6664;DPRA=0;EPP=10727.9;EPPR=3744.46;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9933;MQMR=59.9901;NS=94;NUMALT=1;ODDS=4.91013;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=176491;QR=61536;RO=1723;RPL=0;RPP=10727.9;RPPR=3744.46;RPR=4939;RUN=1;SAF=4939;SAP=10727.9;SAR=0;SRF=1723;SRP=3744.46;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:27,24:27:972:24:856:-62.0086,0,-72.4454	0/1:39:21,18:21:752:18:640:-46.1891,0,-56.2661	0/1:254:153,101:153:5446:101:3624:-249.903,0,-413.8	1/1:162:0,162:0:0:162:5783:-520.585,-48.7669,0	1/1:86:2,84:2:68:84:3003:-264.043,-19.4309,0	1/1:53:0,53:0:0:53:1904:-171.638,-15.9546,0	1/1:66:2,64:2:72:64:2273:-197.994,-13.0313,0	0/1:114:51,63:51:1832:63:2260:-169.345,0,-130.843	1/1:40:0,40:0:0:40:1417:-127.825,-12.0412,0	0/1:98:56,42:56:1995:42:1504:-106.154,0,-150.322	0/1:61:32,29:32:1148:29:1040:-75.5515,0,-85.267	1/1:136:0,136:0:0:136:4867:-438.183,-40.9401,0	1/1:60:0,60:0:0:60:2148:-193.587,-18.0618,0	0/1:30:21,9:21:756:9:319:-20.0205,0,-59.3363	0/1:63:37,26:37:1315:26:928:-64.8734,0,-99.6861	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	1/1:50:0,50:0:0:50:1788:-161.203,-15.0515,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	0/1:37:20,17:20:711:17:612:-44.2753,0,-53.1769	0/1:89:44,45:44:1568:45:1608:-118.218,0,-114.62	1/1:81:2,79:2:72:79:2840:-249.001,-17.5467,0	1/1:113:0,113:0:0:113:4037:-363.517,-34.0164,0	0/1:42:15,27:15:540:27:972:-75.1546,0,-36.2933	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	0/1:86:57,29:57:2044:29:1036:-67.6653,0,-158.343	1/1:140:0,140:0:0:140:4977:-448.079,-42.1442,0	0/1:174:78,96:78:2767:96:3439:-257.344,0,-196.89	0/1:27:15,12:15:540:12:432:-31.0934,0,-40.8087	0/1:164:85,79:85:3044:79:2805:-203.32,0,-224.821	0/1:74:23,51:23:805:51:1821:-141.893,0,-50.4913	0/1:55:33,22:33:1175:22:792:-55.049,0,-89.5003	0/1:23:4,19:4:144:19:680:-54.6055,0,-6.38993	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:13:0,13:0:0:13:455:-41.282,-3.91339,0	1/1:23:0,23:0:0:23:807:-72.9492,-6.92369,0	1/1:23:0,23:0:0:23:819:-74.0316,-6.92369,0	0/1:138:56,82:56:2012:82:2923:-221.763,0,-139.811	1/1:95:0,95:0:0:95:3399:-306.124,-28.5979,0	0/1:57:27,30:27:968:30:1068:-79.2734,0,-70.2787	0/1:7:2,5:2:68:5:180:-14.4449,0,-4.3505	0/1:93:45,48:45:1596:48:1724:-127.45,0,-115.934	0/1:30:12,18:12:432:18:639:-48.8073,0,-30.1903	0/1:161:88,73:88:3152:73:2620:-187.581,0,-235.439	0/1:49:24,25:24:860:25:900:-66.5705,0,-62.9714	1/1:50:0,50:0:0:50:1792:-161.562,-15.0515,0	1/1:74:0,74:0:0:74:2637:-237.576,-22.2762,0	0/1:117:61,56:61:2179:56:1984:-143.611,0,-161.155	1/1:101:0,101:0:0:101:3602:-324.386,-30.404,0	0/1:64:38,26:38:1360:26:928:-64.5723,0,-103.435	0/1:77:29,48:29:1040:48:1724:-132.266,0,-70.7351	1/1:73:0,73:0:0:73:2602:-234.427,-21.9752,0	0/1:11:5,6:5:161:6:216:-16.4792,0,-11.4952	1/1:63:0,63:0:0:63:2255:-203.212,-18.9649,0	0/1:20:9,11:9:324:11:396:-29.9621,0,-23.4853	0/1:15:4,11:4:144:11:387:-30.6505,0,-8.79817	1/1:92:0,92:0:0:92:3293:-296.589,-27.6948,0	1/1:37:0,37:0:0:37:1309:-118.11,-11.1381,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:20:0,20:0:0:20:699:-63.231,-6.0206,0	0/1:39:15,24:15:532:24:855:-65.53,0,-36.4729	1/1:75:0,75:0:0:75:2679:-241.355,-22.5773,0	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	1/1:151:0,151:0:0:151:5417:-487.657,-45.4555,0	1/1:133:6,127:6:216:127:4520:-386.552,-20.2465,0	0/1:50:21,29:21:752:29:1032:-78.142,0,-52.9548	0/1:82:45,37:45:1612:37:1328:-95.1378,0,-120.686	1/1:103:3,100:3:108:100:3581:-312.422,-20.9309,0	1/1:84:0,84:0:0:84:3012:-271.311,-25.2865,0	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	1/1:58:0,58:0:0:58:2063:-185.941,-17.4597,0	1/1:49:0,49:0:0:49:1724:-155.443,-14.7505,0	0/1:30:10,20:10:356:20:720:-56.0979,0,-23.3503	1/1:115:0,114:0:0:114:4057:-364.955,-34.3174,0	0/1:51:30,21:30:1076:21:752:-52.6537,0,-81.8003	1/1:106:0,106:0:0:106:3782:-340.579,-31.9092,0	0/1:130:65,65:65:2312:65:2309:-168.935,0,-169.207	0/1:195:126,68:126:4499:68:2428:-160.164,0,-346.468	1/1:51:0,51:0:0:51:1820:-164.081,-15.3525,0	1/1:23:0,23:0:0:23:813:-73.4891,-6.92369,0	1/1:75:2,73:2:72:73:2619:-229.12,-15.7405,0	1/1:106:0,106:0:0:106:3786:-340.937,-31.9092,0	1/1:104:0,104:0:0:104:3727:-335.63,-31.3071,0	0/1:44:26,18:26:928:18:648:-45.4066,0,-70.5929	1/1:49:0,49:0:0:49:1756:-158.323,-14.7505,0	0/1:40:13,27:13:468:27:972:-75.7567,0,-30.4184	0/1:100:46,54:46:1648:54:1925:-143.422,0,-118.506	0/1:27:13,14:13:464:14:500:-37.2084,0,-33.9697	0/1:53:21,32:21:744:32:1140:-86.9546,0,-51.3297	1/1:59:0,59:0:0:59:2116:-190.709,-17.7608,0	0/1:50:20,30:20:716:30:1080:-82.4618,0,-49.7162	0/1:94:49,45:49:1760:45:1616:-117.433,0,-130.387	0/1:51:27,24:27:959:24:864:-62.73,0,-71.2729	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	1/1:95:2,93:2:72:93:3327:-292.811,-21.7611,0
chr06	32009346	.	G	A	29586.5	PASS	AB=0.503817;ABP=3.44128;AC=47;AF=0.25;AN=188;AO=1736;CIGAR=1X;DP=6698;DPB=6698;DPRA=1.14763;EPP=3686.33;EPPR=10458.7;GTI=0;LEN=1;MEANALT=1;MQM=59.9862;MQMR=59.9927;NS=94;NUMALT=1;ODDS=3.97319;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62262;QR=177363;RO=4958;RPL=10;RPP=3686.33;RPPR=10467.3;RPR=1726;RUN=1;SAF=1736;SAP=3772.69;SAR=0;SRF=4957;SRP=10760.5;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:24,27:24:851:27:968:-72.0848,0,-61.5569	0/1:42:20,22:20:716:22:792:-58.9624,0,-52.1245	0/1:261:103,158:103:3700:158:5660:-430.933,0,-254.632	0/0:162:162,0:162:5808:0:0:0,-48.7669,-522.832	0/0:86:84,2:84:3011:2:68:0,-19.4309,-264.762	0/0:53:53,0:53:1886:0:0:0,-15.9546,-170.017	0/0:65:63,2:63:2256:2:72:0,-12.7302,-196.466	0/1:114:63,51:63:2264:51:1828:-130.484,0,-169.705	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/1:98:41,57:41:1463:57:2048:-155.091,0,-102.464	0/1:63:31,32:31:1112:32:1152:-85.0253,0,-81.4265	0/0:135:135,0:135:4823:0:0:0,-40.639,-434.225	0/0:62:62,0:62:2204:0:0:0,-18.6639,-198.626	0/1:32:10,22:10:345:22:788:-61.6056,0,-21.7479	0/1:63:26,37:26:924:37:1328:-100.857,0,-64.5128	0/0:45:45,0:45:1611:0:0:0,-13.5463,-145.279	0/0:52:52,0:52:1854:0:0:0,-15.6536,-167.138	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:36:15,21:15:540:21:752:-57.1673,0,-38.0995	0/1:88:45,43:45:1591:43:1546:-112.943,0,-116.989	0/0:80:78,2:78:2791:2:72:0,-17.2457,-244.593	0/0:113:112,0:112:4002:0:0:0,-33.7154,-360.009	0/1:43:28,15:28:1004:15:536:-35.6305,0,-77.7316	0/0:23:22,0:22:788:0:0:0,-6.62266,-70.885	0/1:83:28,55:28:1008:55:1970:-152.589,0,-66.0509	0/0:144:144,0:144:5141:0:0:0,-43.3483,-462.831	0/1:172:95,77:95:3404:77:2757:-196.593,0,-254.797	0/1:28:13,15:13:468:15:540:-40.5077,0,-34.0308	0/1:167:81,86:81:2884:86:3084:-227.516,0,-209.526	0/1:75:52,23:52:1864:23:828:-52.2669,0,-145.462	0/1:52:19,33:19:684:33:1180:-90.8545,0,-46.2368	0/1:24:20,4:20:720:4:140:-5.71986,0,-57.9041	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/1:144:89,55:89:3184:55:1980:-135.126,0,-243.436	0/0:95:95,0:95:3395:0:0:0,-28.5978,-305.765	0/1:58:30,28:30:1063:28:1008:-73.5766,0,-78.5211	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	0/1:93:47,46:47:1688:46:1636:-119.533,0,-124.211	0/1:31:18,13:18:640:13:468:-33.1277,0,-48.5974	0/1:164:74,90:74:2647:90:3240:-242.451,0,-189.107	0/1:49:25,24:25:900:24:864:-63.3321,0,-66.5705	0/0:51:51,0:51:1820:0:0:0,-15.3525,-164.081	0/0:76:76,0:76:2719:0:0:0,-22.8783,-244.953	0/1:115:55,60:55:1972:60:2128:-157.168,0,-143.136	0/0:100:100,0:100:3588:0:0:0,-30.103,-323.126	0/1:66:27,39:27:972:39:1404:-106.791,0,-67.9299	0/1:79:49,30:49:1760:30:1076:-73.3715,0,-134.903	0/0:71:71,0:71:2543:0:0:0,-21.3731,-229.12	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/0:63:63,0:63:2251:0:0:0,-18.9649,-202.853	0/1:21:12,9:12:432:9:324:-23.1842,0,-32.8996	0/1:16:12,4:12:432:4:144:-8.49714,0,-34.4047	0/0:93:93,0:93:3320:0:0:0,-27.9958,-299.018	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/1:39:24,15:24:864:15:524:-35.7495,0,-66.3424	0/0:74:74,0:74:2630:0:0:0,-22.2762,-236.944	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/0:150:149,0:149:5352:0:0:0,-44.8535,-481.451	0/0:131:125,6:125:4480:6:216:0,-19.6444,-382.952	0/1:51:30,21:30:1080:21:756:-53.0147,0,-82.1607	0/1:79:35,44:35:1241:44:1580:-118.71,0,-88.2111	0/0:97:94,3:94:3368:3:108:0,-19.1247,-293.261	0/0:83:83,0:83:2967:0:0:0,-24.9855,-267.263	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:55:55,0:55:1971:0:0:0,-16.5566,-177.664	0/0:51:51,0:51:1824:0:0:0,-15.3525,-164.441	0/1:30:20,10:20:712:10:360:-23.7134,0,-55.3758	0/0:115:115,0:115:4123:0:0:0,-34.6184,-371.253	0/1:51:21,30:21:752:30:1061:-80.4468,0,-52.6537	0/0:106:105,1:105:3740:1:36:0,-28.3109,-333.204	0/1:129:65,64:65:2315:64:2304:-168.788,0,-169.777	0/1:199:71,128:71:2548:128:4596:-353.898,0,-169.665	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/0:25:25,0:25:884:0:0:0,-7.52575,-79.8784	0/0:74:72,2:72:2584:2:72:0,-15.4395,-225.972	0/0:103:103,0:103:3663:0:0:0,-31.0061,-329.874	0/0:103:103,0:103:3688:0:0:0,-31.0061,-332.123	0/1:43:17,26:17:608:26:936:-71.6152,0,-42.1077	0/0:48:47,0:47:1684:0:0:0,-14.1484,-151.487	0/1:41:28,13:28:1000:13:464:-29.7553,0,-77.9731	0/1:107:58,49:58:2067:49:1760:-126.474,0,-154.09	0/1:26:15,11:15:540:11:392:-27.7933,0,-41.1098	0/1:56:34,22:34:1211:22:792:-54.748,0,-92.4378	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/1:50:30,20:30:1076:20:720:-50.0773,0,-82.1014	0/1:96:48,48:48:1696:48:1728:-126.906,0,-124.024	0/1:53:26,27:26:932:27:972:-71.8433,0,-68.2443	0/0:45:45,0:45:1608:0:0:0,-13.5463,-145.01	0/0:95:93,2:93:3336:2:72:0,-21.7611,-293.62
chr06	32037111	.	TGCC	CGCC,CGCT	570042	PASS	AB=0.494926,0.501723;ABP=5.34599,3.27971;AC=140,48;AF=0.744681,0.255319;AN=188;AO=15695,5287;CIGAR=1X3M,1X2M1X;DP=21073;DPB=21074.2;DPRA=17.4194,1.30657;EPP=34049.5,11466.2;EPPR=20.3821;GTI=1;LEN=1,4;MEANALT=2.58065,2.84058;MQM=59.9814,59.9166;MQMR=60;NS=94;NUMALT=2;ODDS=8.54165;PAIRED=0,0;PAIREDR=0;PAO=3.5,3.5;PQA=126,126;PQR=0;PRO=0;QA=556259,184526;QR=276;RO=8;RPL=7481,2815;RPP=77.3466,51.331;RPPR=7.35324;RPR=8214,2472;RUN=1,1;SAF=7485,2815;SAP=75.7328,51.331;SAR=8210,2472;SRF=2;SRP=7.35324;SRR=6;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:142:0,70,72:0:0:70,72:2486,2465:-402.996,-200.429,-179.357,-202.916,0,-181.242	1/2:326:1,182,142:1:36:182,142:6457,4954:-925.715,-399.936,-348.086,-523.135,0,-483.326	1/2:333:0,207,125:0:0:207,125:7353,4359:-953.705,-354.558,-292.245,-599.197,0,-561.568	1/1:379:0,376,1:0:0:376,1:13369,36:-1202.59,-113.187,0,-1199.65,-110.228,-1199.35	1/1:168:0,164,3:0:0:164,3:5841,108:-525.447,-49.3689,0,-516.634,-40.5492,-515.731	1/1:80:0,79,1:0:0:79,1:2811,35:-252.881,-23.7814,0,-250.033,-20.5838,-249.732	1/1:356:0,353,1:0:0:353,1:12481,36:-1122.81,-106.264,0,-1119.87,-103.31,-1119.57	1/2:315:0,168,147:0:0:168,147:5904,5116:-896.89,-416.337,-365.764,-480.903,0,-436.651	1/1:199:0,197,1:0:0:197,1:7036,36:-632.971,-59.3029,0,-630.034,-56.3206,-629.733	1/2:266:0,122,143:0:0:122,143:4343,5029:-763.311,-409.357,-372.631,-353.948,0,-310.901	1/2:240:0,113,127:0:0:113,127:3998,4437:-686.918,-361.275,-327.259,-325.994,0,-287.763	1/1:203:0,202,0:0:0:202,0:7139,0:-642.218,-60.8081,0,-642.218,-60.8081,-642.218	1/1:199:0,198,1:0:0:198,1:6996,35:-629.298,-59.6039,0,-626.45,-56.4063,-626.149	1/2:190:0,98,91:0:0:98,91:3462,3133:-536.519,-254.573,-225.072,-282.063,0,-254.669	1/2:160:0,77,83:0:0:77,83:2746,2909:-460.913,-237.064,-213.885,-224.202,0,-199.217	1/1:181:0,181,0:0:0:181,0:6394,0:-575.554,-54.4864,0,-575.554,-54.4864,-575.554	1/1:173:0,171,0:0:0:171,0:6061,0:-545.212,-51.4761,0,-545.212,-51.4761,-545.212	1/1:187:0,187,0:0:0:187,0:6568,0:-591.206,-56.2926,0,-591.206,-56.2926,-591.206	1/2:163:0,85,78:0:0:85,78:3012,2764:-470.894,-225.524,-199.936,-245.724,0,-222.244	1/2:632:1,279,348:1:36:279,348:9953,12209:-1800.88,-989.811,-908.761,-808.475,0,-706.654	1/1:294:0,291,3:0:0:291,3:10226,102:-919.942,-87.5997,0,-911.669,-78.9859,-910.765	1/1:117:0,116,0:0:0:116,0:4116,0:-370.266,-34.9195,0,-370.266,-34.9195,-370.266	1/2:183:0,98,85:0:0:98,85:3437,3018:-525.955,-246.264,-216.763,-280.044,0,-254.456	1/1:302:0,300,0:0:0:300,0:10628,0:-956.084,-90.309,0,-956.084,-90.309,-956.084	1/2:185:0,80,105:0:0:80,105:2838,3643:-527.7,-296.475,-272.392,-231.576,0,-199.968	1/1:611:0,610,0:0:0:610,0:21629,0:-1945.72,-183.628,0,-1945.72,-183.628,-1945.72	1/2:526:0,277,246:0:0:277,246:9880,8534:-1499.08,-693.672,-610.286,-805.426,0,-731.373	1/2:94:0,52,42:0:0:52,42:1841,1466:-269.553,-119.59,-103.936,-150.315,0,-137.671	1/2:459:0,233,226:0:0:233,226:8253,7901:-1315.33,-643.092,-572.952,-672.59,0,-604.557	1/2:241:0,130,108:0:0:130,108:4631,3743:-681.699,-304.229,-265.095,-377.483,0,-344.972	1/2:211:0,89,122:0:0:89,122:3158,4209:-599.58,-342.276,-315.484,-257.654,0,-220.928	1/2:16:0,8,8:0:0:8,8:288,287:-47.2682,-23.7682,-21.36,-23.8592,0,-21.4509	1/1:47:0,47,0:0:0:47,0:1668,0:-150.407,-14.1484,0,-150.407,-14.1484,-150.407	1/1:7:0,7,0:0:0:7,0:248,0:-22.6642,-2.10721,0,-22.6642,-2.10721,-22.6642	1/1:14:0,14,0:0:0:14,0:504,0:-45.6981,-4.21442,0,-45.6981,-4.21442,-45.6981	1/1:31:0,31,0:0:0:31,0:1112,0:-100.391,-9.33193,0,-100.391,-9.33193,-100.391	1/2:544:0,262,278:0:0:262,278:9317,9689:-1547.26,-787.981,-709.112,-759.303,0,-675.617	1/1:235:0,231,1:0:0:231,1:8195,36:-737.216,-69.5379,0,-734.278,-66.5989,-733.977	1/2:185:0,89,94:0:0:89,94:3162,3334:-529.397,-271.738,-244.946,-257.766,0,-229.469	2/2:13:0,0,13:0:0:0,13:0,436:-39.5595,-39.5595,-39.5595,-3.91339,-3.91339,0	1/2:223:0,88,134:0:0:88,134:3139,4704:-638.72,-382.83,-356.34,-255.884,0,-215.546	1/2:121:0,56,65:0:0:56,65:1997,2254:-346.304,-183.556,-166.699,-163.1,0,-143.533	1/2:375:0,183,191:0:0:183,191:6470,6617:-1064.62,-537.854,-482.765,-526.833,0,-469.337	1/2:239:0,119,120:0:0:119,120:4196,4207:-684.34,-342.691,-306.869,-342,0,-305.877	1/1:176:1,173,0:1:36:173,0:6121,0:-547.45,-49.0992,0,-547.751,-52.0782,-550.689	1/1:196:1,195,0:1:36:195,0:6912,0:-618.556,-55.4036,0,-618.857,-58.7009,-621.794	1/2:324:1,159,164:1:33:159,164:5637,5724:-921.761,-462.823,-417.627,-456.593,0,-409.892	1/1:320:0,314,3:0:0:314,3:11161,101:-1004.05,-94.5234,0,-995.866,-86.3299,-994.963	1/2:224:0,119,104:0:0:119,104:4212,3653:-640.401,-297.313,-261.491,-343.081,0,-311.773	1/2:309:0,162,146:0:0:162,146:5764,5127:-887.14,-417.383,-368.616,-469.859,0,-425.909	1/1:343:0,341,1:0:0:341,1:12106,36:-1089.04,-102.651,0,-1086.1,-99.7138,-1085.8	1/2:24:0,11,13:0:0:11,13:392,468:-70.4971,-38.5463,-35.2349,-32.3087,0,-28.3953	1/1:325:0,323,0:0:0:323,0:11481,0:-1032.79,-97.2327,0,-1032.79,-97.2327,-1032.79	1/2:114:0,45,69:0:0:45,69:1608,2402:-326.776,-195.666,-182.119,-131.464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chr06	32415509	.	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chr06	32415517	.	GG	CA	14963.1	PASS	AB=0.254639;ABP=3243.46;AC=43;AF=0.228723;AN=188;AO=1588;CIGAR=2X;DP=13787;DPB=13787;DPRA=1.00657;EPP=3442.63;EPPR=26282.4;GTI=8;LEN=2;MEANALT=1.16;MQM=59.8526;MQMR=59.9875;NS=94;NUMALT=1;ODDS=1.73357;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55746;QR=429195;RO=12178;RPL=1;RPP=3442.63;RPPR=26282.4;RPR=1587;RUN=1;SAF=1588;SAP=3451.31;SAR=0;SRF=12178;SRP=26447.2;SRR=0;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:119:93,26:93:3283:26:930:-48.1881,0,-259.866	0/1:131:92,39:92:3247:39:1365:-83.7111,0,-253.015	0/1:216:158,57:158:5577:57:2036:-118.43,0,-436.973	0/0:353:353,0:353:12418:0:0:0,-106.264,-1117.47	0/0:76:76,0:76:2675:0:0:0,-22.8783,-240.994	0/0:61:61,0:61:2136:0:0:0,-18.3628,-192.505	0/0:185:184,1:184:6477:1:36:0,-52.0923,-579.42	0/1:242:176,66:176:6136:66:2304:-134.752,0,-479.269	0/0:216:215,1:215:7502:1:36:0,-61.4242,-671.63	0/1:164:120,44:120:4205:44:1519:-87.6267,0,-329.262	0/1:69:61,8:61:2135:8:286:-5.31442,0,-171.644	0/0:197:197,0:197:6937:0:0:0,-59.3029,-624.403	0/0:137:137,0:137:4859:0:0:0,-41.2411,-437.464	0/1:73:49,24:49:1726:24:850:-54.8446,0,-133.645	0/1:170:121,49:121:4282:49:1740:-105.707,0,-334.383	0/0:91:91,0:91:3187:0:0:0,-27.3937,-287.051	0/0:43:43,0:43:1509:0:0:0,-12.9443,-136.1	0/0:54:54,0:54:1885:0:0:0,-16.2556,-169.924	0/1:50:31,19:31:1100:19:682:-46.6584,0,-84.2592	0/1:175:130,45:130:4604:45:1543:-86.4708,0,-361.845	0/0:265:264,0:264:9352:0:0:0,-79.4719,-841.291	0/0:135:135,0:135:4735:0:0:0,-40.639,-426.312	0/1:211:168,43:168:5949:43:1512:-72.8533,0,-472	0/0:119:119,0:119:4231:0:0:0,-35.8226,-380.97	0/1:167:136,31:136:4806:31:1081:-47.3233,0,-382.424	0/0:326:325,0:325:11516:0:0:0,-97.8347,-1035.96	0/1:433:319,113:319:11234:113:3979:-227.898,0,-880.551	0/1:58:38,20:38:1366:20:718:-47.4886,0,-105.781	0/1:440:360,80:360:12640:80:2790:-118.887,0,-1004.99	0/1:202:149,53:149:5247:53:1850:-105.961,0,-411.562	0/1:166:114,52:114:4023:52:1845:-116.36,0,-312.287	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:42:42,0:42:1455:0:0:0,-12.6433,-131.24	0/0:9:9,0:9:313:0:0:0,-2.70927,-28.5051	0/0:6:6,0:6:203:0:0:0,-1.80618,-18.6003	0/0:21:21,0:21:738:0:0:0,-6.32163,-66.7417	0/1:381:293,88:293:10336:88:3081:-162.825,0,-815.479	0/0:220:220,0:220:7740:0:0:0,-66.2266,-696.639	0/1:71:54,17:54:1914:17:604:-33.3174,0,-151.161	0/1:4:1,3:1:36:3:106:-8.68498,0,-2.39415	0/1:147:91,54:91:3209:54:1910:-128.018,0,-245.077	0/0:46:46,0:46:1628:0:0:0,-13.8474,-146.807	0/1:213:143,70:143:5055:70:2445:-156.179,0,-390.977	0/1:89:68,21:68:2378:21:743:-40.4014,0,-187.483	0/0:98:98,0:98:3458:0:0:0,-29.5009,-311.432	0/0:229:229,0:229:8096:0:0:0,-68.9359,-728.661	0/1:235:177,58:177:6298:58:2022:-111.505,0,-496.171	0/0:289:289,0:289:10174:0:0:0,-86.9977,-915.599	0/0:162:161,0:161:5674:0:0:0,-48.4658,-510.423	0/1:139:108,31:108:3810:31:1075:-55.2089,0,-301.255	0/0:61:61,0:61:2154:0:0:0,-18.3628,-194.125	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:173:173,0:173:6100:0:0:0,-52.0782,-549.098	0/1:73:49,24:49:1747:24:847:-54.5735,0,-135.538	0/1:10:7,3:7:250:3:96:-5.94719,0,-19.8364	0/1:232:159,72:159:5597:72:2490:-154.6,0,-434.108	0/0:88:86,2:86:3040:2:72:0,-19.6539,-266.993	0/1:6:2,4:2:61:4:144:-11.5074,0,-3.98705	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1531	0/1:136:110,26:110:3802:26:925:-42.6279,0,-301.414	0/0:150:149,0:149:5221:0:0:0,-44.8535,-469.671	0/1:7:6,1:6:210:1:36:-1.49107,0,-17.1348	0/0:240:240,0:240:8500:0:0:0,-72.2472,-765.005	0/0:253:253,0:253:8931:0:0:0,-76.1606,-803.78	0/1:86:67,19:67:2345:19:674:-35.0984,0,-185.418	0/1:148:110,38:110:3930:38:1332:-75.6137,0,-309.339	0/0:317:317,0:317:11151:0:0:0,-95.4265,-1003.49	0/0:275:275,0:275:9746:0:0:0,-82.7832,-877.093	0/0:49:49,0:49:1688:0:0:0,-14.7505,-152.199	0/0:84:84,0:84:2957:0:0:0,-25.2865,-266.364	0/0:92:91,1:91:3122:1:36:0,-24.0965,-277.604	0/1:40:34,6:34:1193:6:214:-7.56656,0,-95.6318	0/0:244:244,0:244:8563:0:0:0,-73.4513,-770.676	0/1:139:95,44:95:3334:44:1548:-97.5619,0,-258.326	0/0:222:220,0:220:7753:0:0:0,-66.2266,-697.447	0/0:273:273,0:273:9716:0:0:0,-82.1812,-874.391	0/1:156:124,29:124:4412:29:1003:-44.1944,0,-350.871	0/0:169:167,2:167:5870:2:72:0,-44.0373,-521.578	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:180:178,2:178:6345:2:72:0,-47.3487,-564.293	0/0:156:154,0:154:5407:0:0:0,-46.3586,-486.451	0/0:332:332,0:332:11679:0:0:0,-99.942,-1050.99	0/1:144:106,38:106:3754:38:1342:-77.7297,0,-294.71	0/0:109:109,0:109:3859:0:0:0,-32.8123,-347.505	0/1:83:57,26:57:2037:26:910:-57.0363,0,-158.616	0/1:250:186,63:186:6564:63:2211:-124.056,0,-515.68	0/1:48:36,12:36:1245:12:422:-23.8653,0,-97.8979	0/0:119:116,0:116:4066:0:0:0,-34.9195,-365.78	0/0:119:119,0:119:4233:0:0:0,-35.8226,-381.149	0/1:50:41,9:41:1455:9:322:-14.2727,0,-116.194	0/1:93:73,20:73:2561:20:710:-36.2299,0,-202.741	0/1:131:98,33:98:3405:33:1144:-63.8257,0,-267.227	0/0:229:228,1:228:8017:1:36:0,-65.3376,-717.958	0/0:229:228,0:228:7993:0:0:0,-68.6348,-719.04
chr06	32415523	.	C	A	10177.4	PASS	AB=0.216753;ABP=4462.22;AC=44;AF=0.234043;AN=188;AO=1392;CIGAR=1X;DP=13562;DPB=13562;DPRA=1.13216;EPP=3025.7;EPPR=26025.3;GTI=14;LEN=1;MEANALT=1.04082;MQM=59.9562;MQMR=59.9707;NS=94;NUMALT=1;ODDS=1.63586;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=49341;QR=434318;RO=12167;RPL=0;RPP=3025.7;RPPR=26033.9;RPR=1392;RUN=1;SAF=1392;SAP=3025.7;SAR=0;SRF=12166;SRP=26414.6;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:115:71,44:71:2540:44:1576:-107.513,0,-194.224	0/1:125:108,17:108:3854:17:608:-17.4233,0,-309.427	0/1:209:169,40:169:6042:40:1423:-65.4521,0,-480.968	0/0:348:348,0:348:12414:0:0:0,-104.758,-1117.1	0/0:74:74,0:74:2643:0:0:0,-22.2762,-238.116	0/0:61:61,0:61:2160:0:0:0,-18.3628,-194.665	0/0:182:182,0:182:6520:0:0:0,-54.7875,-586.883	0/1:236:195,41:195:6979:41:1458:-60.4422,0,-557.067	0/0:213:213,0:213:7610:0:0:0,-64.1194,-684.935	0/1:160:130,30:130:4634:30:1053:-46.9114,0,-369.059	0/1:69:48,21:48:1715:21:736:-45.7913,0,-133.864	0/0:196:196,0:196:6994:0:0:0,-59.0019,-629.525	0/0:140:140,0:140:4985:0:0:0,-42.1442,-448.799	0/1:72:58,14:58:2080:14:504:-24.0239,0,-165.792	0/1:165:130,35:130:4664:35:1252:-63.3151,0,-370.251	0/0:89:89,0:89:3191:0:0:0,-26.7917,-287.412	0/0:45:45,0:45:1599:0:0:0,-13.5463,-144.199	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/1:49:42,7:42:1503:7:244:-7.54839,0,-120.813	0/1:170:134,36:134:4783:36:1280:-64.3281,0,-379.449	0/0:264:264,0:264:9409:0:0:0,-79.4719,-846.774	0/0:133:133,0:133:4741:0:0:0,-40.037,-426.849	0/1:206:162,44:162:5778:44:1548:-77.5996,0,-458.124	0/0:119:119,0:119:4263:0:0:0,-35.8226,-383.847	0/1:162:124,38:124:4431:38:1360:-73.9337,0,-350.195	0/0:320:320,0:320:11441:0:0:0,-96.3296,-1029.57	0/1:424:330,93:330:11763:93:3328:-172.042,0,-930.84	0/1:58:42,16:42:1500:16:568:-33.9921,0,-117.835	0/1:433:331,102:331:11815:102:3628:-196.381,0,-932.867	0/1:196:162,34:162:5770:34:1220:-51.1049,0,-460.409	0/1:161:133,28:133:4732:28:973:-39.4142,0,-377.574	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/0:41:40,1:40:1423:1:36:0,-8.74395,-124.768	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/0:20:20,0:20:693:0:0:0,-6.0206,-62.6894	0/1:363:283,80:283:10140:80:2823:-145.034,0,-803.256	0/0:215:214,1:214:7582:1:36:0,-61.1232,-678.828	0/1:70:56,14:56:2008:14:500:-24.2641,0,-159.921	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:144:115,29:115:4100:29:1036:-50.2056,0,-325.718	0/1:43:38,5:38:1368:5:168:-2.50607,0,-110.477	0/1:208:184,24:184:6565:24:855:-14.6559,0,-528.308	0/1:92:66,26:66:2368:26:932:-56.5041,0,-185.683	0/0:97:97,0:97:3438:0:0:0,-29.1999,-309.635	0/0:227:227,0:227:8078:0:0:0,-68.3338,-727.041	0/1:228:171,57:171:6127:57:2032:-114.518,0,-482.889	0/0:286:286,0:286:10200:0:0:0,-86.0946,-917.93	0/1:159:121,38:121:4331:38:1315:-70.7795,0,-342.101	0/1:136:106,30:106:3774:30:1044:-53.3269,0,-298.92	0/0:59:59,0:59:2120:0:0:0,-17.7608,-191.068	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:169:169,0:169:6028:0:0:0,-50.8741,-542.624	0/1:72:61,11:61:2183:11:392:-13.9459,0,-175.061	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	0/0:232:231,1:231:8194:1:21:0,-67.739,-734.89	0/0:88:88,0:88:3133:0:0:0,-26.4906,-282.195	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:30:30,0:30:1057:0:0:0,-9.0309,-95.439	0/1:132:100,32:100:3561:32:1126:-61.9043,0,-280.957	0/0:149:149,0:149:5310:0:0:0,-44.8535,-478.036	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:235:235,0:235:8376:0:0:0,-70.742,-753.848	0/0:247:247,0:247:8831:0:0:0,-74.3544,-794.777	0/1:86:71,15:71:2548:15:517:-20.966,0,-203.682	0/1:146:110,36:110:3940:36:1295:-72.9036,0,-310.813	0/0:312:312,0:312:11145:0:0:0,-93.9214,-1002.94	0/0:270:269,1:269:9579:1:36:0,-77.6798,-858.471	0/0:46:46,0:46:1644:0:0:0,-13.8474,-148.249	0/0:86:86,0:86:3049:0:0:0,-25.8886,-274.64	0/0:93:93,0:93:3319:0:0:0,-27.9958,-298.928	0/1:40:31,9:31:1108:9:324:-17.4647,0,-87.9898	0/0:241:241,0:241:8593:0:0:0,-72.5482,-773.369	0/1:136:115,21:115:4082:21:748:-26.7052,0,-325.858	0/0:225:225,0:225:8034:0:0:0,-67.7317,-723.08	0/1:272:211,61:211:7557:61:2173:-113.955,0,-598.287	0/1:156:123,33:123:4408:33:1168:-58.4665,0,-349.931	0/0:167:167,0:167:5963:0:0:0,-50.272,-536.778	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:179:179,0:179:6406:0:0:0,-53.8844,-576.62	0/0:152:152,0:152:5422:0:0:0,-45.7566,-488.111	0/0:331:330,1:330:11801:1:36:0,-96.0426,-1058.35	0/1:139:106,33:106:3778:33:1153:-62.2315,0,-298.376	0/0:108:108,0:108:3875:0:0:0,-32.5112,-348.943	0/1:82:65,17:65:2310:17:604:-30.0061,0,-182.455	0/1:245:192,53:192:6828:53:1873:-95.0948,0,-540.564	0/1:47:35,12:35:1256:12:413:-23.3494,0,-99.1969	0/1:118:88,29:88:3164:29:1040:-58.3341,0,-249.403	0/0:118:118,0:118:4232:0:0:0,-35.5215,-381.059	0/1:48:36,12:36:1296:12:428:-24.4094,0,-102.494	0/1:90:65,25:65:2313:25:884:-52.7857,0,-181.336	0/1:123:81,42:81:2904:42:1466:-95.2014,0,-224.562	0/0:231:231,0:231:8247:0:0:0,-69.5379,-742.244	0/0:226:225,0:225:8032:0:0:0,-67.7317,-722.541
chr06	32415561	.	TGA	CGT,TGT	139534	PASS	AB=0.298325,0.205239;ABP=8859.75,12563.6;AC=55,39;AF=0.292553,0.207447;AN=188;AO=7479,3416;CIGAR=1X1M1X,2M1X;DP=25070;DPB=25503;DPRA=0,0;EPP=16243.5,7420.76;EPPR=30670.7;GTI=1;LEN=3,1;MEANALT=2.06383,2.50877;MQM=59.7274,59.7359;MQMR=59.9705;NS=94;NUMALT=2;ODDS=3.25894;PAIRED=0,0;PAIREDR=0;PAO=1291,3;PQA=45232,108;PQR=72;PRO=2;QA=258967,122208;QR=490140;RO=14127;RPL=2,1171;RPP=16226.1,736.248;RPPR=2296.8;RPR=7477,2245;RUN=1,1;SAF=2,1171;SAP=16226.1,736.248;SAR=7477,2245;SRF=5131;SRP=2299.18;SRR=8996;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	0/2:59:28,12,19:28:951:12,19:411,676:-46.6404,-21.7089,-94.9931,0,-43.5365,-71.1789	0/2:335:167,77,91:167:5830:77,91:2696,3272:-216.677,-47.5999,-498.623,0,-254.853,-446.812	0/2:214:98,53,63:98:3429:53,63:1837,2253:-154.186,-34.3818,-297.401,0,-129.67,-260.012	0/1:473:309,163,1:309:10725:163,1:5633,36:-364.414,0,-822.741,-454.495,-868.871,-1326.02	0/1:182:126,55,1:126:4369:55,1:1938,36:-119.863,0,-338.56,-154.855,-352.179,-509.667	0/1:145:79,66,0:79:2771:66,0:2297,0:-162.984,0,-205.634,-186.765,-225.502,-412.268	0/1:333:220,108,5:220:7671:108,5:3772,176:-240.578,0,-591.355,-292.477,-609.538,-914.84	0/2:402:182,109,109:182:6283:109,109:3741,3908:-263.897,-15.0352,-492.665,0,-206.794,-477.634	0/1:226:126,100,0:126:4301:100,0:3411,0:-238.802,0,-317.797,-276.732,-347.9,-624.635	0/2:363:191,56,114:191:6602:56,114:1958,4086:-275.645,-173.862,-693.436,0,-377.154,-502.12	0/2:178:96,38,44:96:3333:38,44:1315,1567:-98.8215,-20.9003,-280.403,0,-164.124,-257.703	0/1:164:78,85,0:78:2729:85,0:2956,0:-216.84,0,-196.438,-240.321,-222.026,-462.348	0/1:146:79,66,0:79:2752:66,0:2331,0:-166.04,0,-203.92,-189.822,-223.788,-413.612	0/2:215:103,39,72:103:3511:39,72:1368,2588:-180.123,-99.8083,-372.917,0,-173.527,-263.179	0/2:271:159,35,77:159:5488:35,77:1214,2760:-177.203,-126.392,-561.7,0,-347.173,-422.672	0/1:151:94,57,0:94:3260:57,0:1962,0:-131.028,0,-247.807,-159.324,-264.966,-424.304	0/1:160:76,84,0:76:2582:84,0:2912,0:-213.793,0,-184.107,-236.672,-209.394,-446.078	0/1:148:72,76,0:72:2473:76,0:2623,0:-191.401,0,-177.921,-213.075,-200.799,-413.881	0/1:63:29,22,12:29:1026:22,12:760,432:-53.0081,0,-76.945,-26.5023,-48.3336,-106.462	0/2:499:228,134,137:228:7937:134,137:4639,4910:-331.809,-23.4636,-628.511,0,-268.407,-604.152	0/1:435:288,146,0:288:9840:146,0:5022,0:-321.124,0,-754.601,-407.82,-798.551,-1206.37	0/1:218:139,79,0:139:4705:79,0:2764,0:-183.317,0,-357.943,-225.16,-381.724,-606.598	0/2:363:212,42,108:212:7369:42,108:1434,3867:-251.387,-199.705,-786.165,0,-483.612,-566.605	0/1:333:196,137,0:196:6810:137,0:4800,0:-331.49,0,-512.391,-390.492,-553.632,-944.135	0/2:229:141,26,60:141:4951:26,60:912,2133:-131.374,-99.6054,-494.728,0,-328.739,-384.891	0/1:685:364,318,1:364:12655:318,1:11141,36:-796.882,0,-933.182,-903.519,-1025.97,-1932.11	0/2:699:390,110,197:390:13511:110,197:3800,7029:-455.597,-264.285,-1329.05,0,-789.172,-1038.59	0/2:135:57,31,47:57:2001:31,47:1056,1669:-118.832,-50.3368,-203.843,0,-77.1906,-148.699	0/2:794:418,178,198:418:14566:178,198:6187,7076:-451.11,-73.9487,-1204.91,0,-681.557,-1124.95	0/2:490:268,90,131:268:9326:90,131:3133,4700:-302.696,-128.724,-859.936,0,-503.66,-718.877	0/2:355:187,76,91:187:6488:76,91:2615,3243:-207.681,-51.6061,-556.101,0,-315.01,-499.988	0/1:8:3,5,0:3:106:5,0:172,0:-13.4092,0,-7.48086,-14.3123,-8.98601,-22.9486	0/1:31:24,7,0:24:852:7,0:250,0:-13.5148,0,-67.6689,-20.7395,-69.7761,-90.1591	0/1:11:7,4,0:7:225:4,0:137,0:-9.00412,0,-16.9049,-11.1113,-18.109,-29.233	0/1:8:3,5,0:3:100:5,0:180,0:-14.1438,0,-6.92162,-15.0469,-8.42677,-23.1305	0/1:6:3,3,0:3:108:3,0:104,0:-7.54832,0,-7.91215,-8.45141,-8.81524,-17.2664	0/2:750:409,141,198:409:14338:141,198:4856,7055:-451.931,-180.639,-1304.93,0,-772.33,-1107.14	0/1:476:283,193,0:283:9800:193,0:6684,0:-457.885,0,-738.332,-543.076,-796.431,-1339.51	0/2:117:53,23,41:53:1813:23,41:801,1464:-103.372,-54.192,-194.417,0,-82.0137,-134.809	0/2:7:3,1,3:3:108:1,3:34,108:-7.92411,-6.0742,-14.5854,0,-6.0742,-7.92411	0/2:360:170,75,115:170:5898:75,115:2640,4120:-284.765,-121.032,-577.503,0,-264.139,-444.432	0/1:83:45,38,0:45:1580:38,0:1335,0:-95.4647,0,-117.504,-109.011,-128.943,-237.603	0/2:413:209,55,149:209:7232:55,149:1905,5348:-373.129,-281.235,-852.363,0,-432.879,-542.838	0/2:275:139,50,86:139:4873:50,86:1741,3054:-206.932,-107.232,-488.717,0,-254.995,-370.652	0/1:223:134,89,0:134:4602:89,0:3021,0:-204.633,0,-346.87,-244.971,-373.662,-618.652	0/1:294:196,97,0:196:6840:97,0:3350,0:-213.182,0,-527.154,-272.184,-556.354,-828.525	0/1:213:116,58,38:116:4067:58,38:2011,1358:-128.53,0,-313.494,-52.7239,-220.23,-372.24	0/1:377:244,132,1:244:8348:132,1:4569,36:-297.674,0,-637.809,-368.187,-674.607,-1045.45	0/1:279:179,100,0:179:6267:100,0:3479,0:-228.969,0,-479.79,-282.854,-509.893,-792.758	0/2:467:214,122,129:214:7473:122,129:4205,4635:-313.696,-36.5763,-607.707,0,-266.32,-569.032	0/1:300:173,126,0:173:5967:126,0:4364,0:-302.604,0,-446.825,-354.682,-484.755,-839.411	0/2:19:7,4,7:7:250:4,7:134,252:-18.4803,-9.73932,-28.9234,0,-9.5574,-18.2992	0/1:259:112,147,0:112:3961:147,0:5059,0:-377.128,0,-278.368,-410.843,-322.619,-733.462	0/2:174:82,34,58:82:2843:34,58:1187,2071:-144.162,-72.3036,-293.139,0,-134.528,-213.615	0/1:34:18,9,7:18:630:9,7:324,252:-21.0204,0,-48.4568,-5.87564,-30.6012,-54.9343	0/2:399:225,53,121:225:7803:53,121:1827,4336:-285.869,-205.203,-822.866,0,-485.225,-597.202	0/1:136:97,37,2:97:3385:37,2:1274,72:-74.2609,0,-264.171,-97.5852,-269.434,-372.306	0/2:26:16,3,7:16:566:3,7:108,244:-15.0193,-11.0201,-56.2212,0,-37.2821,-43.9881	0/1:35:20,15,0:20:697:15,0:517,0:-36.3191,0,-52.5164,-42.3397,-57.0319,-99.0254	0/2:294:177,44,72:177:6141:44,72:1544,2568:-156.061,-83.6972,-569.603,0,-373.506,-477.481	0/1:310:192,118,0:192:6709:118,0:4068,0:-272.991,0,-510.582,-330.789,-546.104,-876.547	0/2:17:5,2,9:5:174:2,9:72,320:-24.6017,-20.2292,-33.7776,0,-8.28564,-11.4591	0/1:476:256,217,0:256:8941:217,0:7523,0:-534.413,0,-661.03,-611.476,-726.353,-1337.74	0/1:722:440,278,4:440:15261:278,4:9634,144:-650.516,0,-1156.76,-771.219,-1228.7,-2010.48	0/2:331:154,81,95:154:5411:81,95:2827,3408:-231.608,-48.0407,-464.073,0,-210.494,-411.824	0/2:194:121,19,52:121:4081:19,52:657,1860:-114.693,-97.7314,-422.724,0,-277.331,-315.067	0/1:498:317,180,0:317:11028:180,0:6160,0:-404.568,0,-842.503,-499.994,-896.688,-1396.67	0/1:358:257,97,2:257:8929:97,2:3356,72:-195.319,0,-696.689,-266.808,-720.014,-992.104	0/1:96:62,33,1:62:2149:33,1:1129,36:-72.9478,0,-164.711,-88.6738,-171.708,-263.033	0/1:166:95,71,0:95:3293:71,0:2444,0:-169.888,0,-246.27,-198.486,-267.643,-466.13	0/1:279:145,132,1:145:5036:132,1:4616,36:-331.907,0,-369.697,-372.619,-406.496,-781.718	0/2:63:35,11,17:35:1236:11,17:396,608:-39.0396,-17.2655,-114.607,0,-68.3394,-95.5328	0/1:171:94,77,0:94:3218:77,0:2566,0:-179.374,0,-238.03,-207.671,-261.209,-468.882	0/2:113:62,22,29:62:2132:22,29:771,1044:-66.5018,-22.4297,-188.94,0,-110.396,-164.404	0/1:570:347,223,0:347:11947:223,0:7686,0:-519.201,0,-903.205,-623.658,-970.335,-1593.99	0/1:437:273,163,0:273:9516:163,0:5667,0:-378.526,0,-724.813,-460.707,-773.881,-1234.6	0/1:235:111,67,56:111:3864:67,56:2316,2012:-154.689,0,-294.023,-24.0689,-150.159,-321.409	0/1:322:171,150,1:171:5841:150,1:5250,36:-375.657,0,-428.841,-424.196,-471.058,-897.893	0/1:32:20,12,0:20:699:12,0:405,0:-26.795,0,-53.2524,-32.8156,-56.8648,-89.6837	0/1:256:175,78,3:175:6098:78,3:2739,104:-170.237,0,-472.423,-214.464,-487.45,-709.466	0/1:216:118,96,0:118:4019:96,0:3347,0:-236.676,0,-297.142,-272.198,-326.041,-598.239	0/1:480:309,168,0:309:10776:168,0:5853,0:-382.943,0,-825.837,-475.961,-876.41,-1352.37	0/2:362:190,71,100:190:6549:71,100:2451,3575:-234.306,-92.3852,-602.977,0,-332.851,-501.87	0/1:196:112,83,0:112:3913:83,0:2882,0:-200.532,0,-293.31,-234.247,-318.295,-552.554	0/2:302:156,46,100:156:5347:46,100:1605,3583:-244.232,-160.658,-580.882,0,-303.537,-403.973	0/2:532:303,79,150:303:10497:79,150:2709,5334:-343.383,-214.68,-1044.02,0,-633.208,-807.972	0/1:94:51,24,19:51:1794:24,19:843,684:-53.2595,0,-138.813,-12.8193,-90.246,-153.14	0/1:181:85,96,0:85:2920:96,0:3307,0:-242.997,0,-208.207,-268.584,-237.105,-505.692	0/1:173:78,95,0:78:2724:95,0:3230,0:-238.477,0,-192.973,-261.957,-221.571,-483.533	0/2:119:75,21,23:75:2605:21,23:708,824:-44.6273,-9.83897,-215.284,0,-154.409,-204.858	0/2:200:121,26,53:121:4148:26,53:894,1898:-118.367,-82.1978,-411.105,0,-264.145,-320.789	0/2:267:160,19,88:160:5569:19,88:628,3168:-210.324,-207.716,-654.822,0,-402.073,-426.358	0/1:384:216,166,1:216:7469:166,1:5682,36:-395.807,0,-556.937,-457.892,-603.97,-1064.5	0/1:381:260,120,0:260:9129:120,0:4096,0:-254.077,0,-706.854,-332.345,-742.978,-1075.34
chr06	32415575	.	AAA	GAA,GAG	390972	PASS	AB=0.730279,0.26606;ABP=3903.35,4028.35;AC=145,43;AF=0.771277,0.228723;AN=188;AO=16188,2275;CIGAR=1X2M,1X1M1X;DP=18527;DPB=18527;DPRA=0,1.33971;EPP=35111.4,4943.11;EPPR=7.35324;GTI=9;LEN=1,3;MEANALT=2.15957,2.625;MQM=59.8872,59.578;MQMR=60;NS=94;NUMALT=2;ODDS=1.58993;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=573091,78005;QR=60;RO=2;RPL=6,0;RPP=35102.7,4943.11;RPPR=7.35324;RPR=16182,2275;RUN=1,1;SAF=1,0;SAP=35146.1,4943.11;SAR=16187,2275;SRF=0;SRP=7.35324;SRR=2;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:56:0,37,19:0:0:37,19:1287,628:-155.745,-51.0925,-39.9544,-104.989,0,-99.2696	1/2:336:0,245,90:0:0:245,90:8729,3135:-966.418,-254.927,-181.175,-711.481,0,-684.389	1/2:212:0,148,63:0:0:148,63:5287,2188:-608.993,-177.929,-133.376,-431.133,0,-412.168	1/1:278:0,276,1:0:0:276,1:9773,34:-879.028,-83.0843,0,-876.27,-80.2765,-875.969	1/1:144:0,144,0:0:0:144,0:5123,0:-461.213,-43.3483,0,-461.213,-43.3483,-461.213	1/1:145:0,145,0:0:0:145,0:5151,0:-463.724,-43.6494,0,-463.724,-43.6494,-463.724	1/1:241:0,233,4:0:0:233,4:8258,134:-742.892,-70.14,0,-732.041,-59.2821,-730.837	1/2:403:0,290,111:0:0:290,111:10224,3777:-1138.86,-306.443,-219.144,-832.52,0,-799.106	1/1:221:0,218,1:0:0:218,1:7683,33:-691.21,-65.6245,0,-688.541,-62.9384,-688.24	1/2:230:0,154,76:0:0:154,76:5466,2573:-654.253,-208.903,-162.544,-445.693,0,-422.815	1/2:123:0,84,39:0:0:84,39:2999,1332:-352.934,-108.43,-83.1431,-244.85,0,-233.11	1/1:166:0,166,0:0:0:166,0:5789,0:-521.1,-49.971,0,-521.1,-49.971,-521.1	1/1:148:0,148,0:0:0:148,0:5253,0:-472.901,-44.5524,0,-472.901,-44.5524,-472.901	1/2:161:0,109,51:0:0:109,51:3860,1757:-457.09,-142.658,-109.845,-314.421,0,-299.069	1/2:138:0,108,30:0:0:108,30:3776,1004:-388.813,-81.6228,-49.1115,-307.528,0,-298.497	1/1:106:0,105,0:0:0:105,0:3720,0:-334.629,-31.6082,0,-334.629,-31.6082,-334.629	1/1:159:0,158,1:0:0:158,1:5601,36:-503.858,-47.5627,0,-500.924,-44.2692,-500.623	1/1:143:0,143,0:0:0:143,0:5031,0:-452.93,-43.0473,0,-452.93,-43.0473,-452.93	1/2:62:0,49,13:0:0:49,13:1723,453:-176.233,-35.9731,-21.2226,-140.601,0,-136.688	1/2:371:0,273,95:0:0:273,95:9637,3228:-1046.6,-261.833,-179.652,-784.854,0,-756.256	1/1:284:0,284,0:0:0:284,0:10064,0:-905.652,-85.4925,0,-905.652,-85.4925,-905.652	1/1:143:0,142,0:0:0:142,0:5000,0:-449.899,-42.7463,0,-449.899,-42.7463,-449.899	1/2:211:0,145,66:0:0:145,66:5146,2244:-601.037,-182.029,-138.38,-419.352,0,-399.484	1/1:270:1,268,0:1:24:268,0:9535,0:-855.587,-78.8771,0,-855.888,-80.676,-857.747	1/2:115:0,85,29:0:0:85,29:3029,993:-327.5,-80.599,-55.0114,-246.907,0,-238.177	1/1:559:0,557,1:0:0:557,1:19804,36:-1781.44,-167.674,0,-1778.51,-164.733,-1778.21	1/2:373:0,283,90:0:0:283,90:10029,3086:-1067.84,-250.86,-165.669,-817.32,0,-790.228	1/2:89:0,61,26:0:0:61,26:2144,877:-245.643,-71.126,-52.7632,-174.578,0,-166.751	1/2:482:0,363,119:0:0:363,119:12884,4145:-1387.15,-337.418,-228.144,-1050.08,0,-1014.26	1/2:350:0,269,81:0:0:269,81:9560,2822:-1008.78,-229.839,-148.862,-779.286,0,-754.903	1/2:231:0,186,43:0:0:186,43:6619,1454:-657.207,-117.747,-61.7557,-539.537,0,-526.593	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/1:11:0,11,0:0:0:11,0:372,0:-33.8038,-3.31133,0,-33.8038,-3.31133,-33.8038	1/1:8:0,8,0:0:0:8,0:284,0:-25.9034,-2.40824,0,-25.9034,-2.40824,-25.9034	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/2:478:0,362,114:0:0:362,114:12711,3956:-1355.71,-321.209,-212.236,-1034.63,0,-1000.31	1/1:363:0,363,0:0:0:363,0:12808,0:-1152.22,-109.274,0,-1152.22,-109.274,-1152.22	1/2:121:0,78,41:0:0:78,41:2736,1402:-336.471,-113.813,-90.3331,-222.715,0,-210.373	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:241:0,177,63:0:0:177,63:6264,2186:-687.891,-177.702,-124.419,-510.256,0,-491.291	1/1:65:0,65,0:0:0:65,0:2297,0:-206.99,-19.567,0,-206.99,-19.567,-206.99	1/2:256:0,173,82:0:0:173,82:6101,2800:-723.96,-227.188,-175.11,-496.835,0,-472.151	1/2:208:0,141,64:0:0:141,64:4979,2187:-582.902,-177.462,-135.017,-405.504,0,-386.239	1/1:164:0,163,0:0:0:163,0:5680,0:-511.105,-49.0679,0,-511.105,-49.0679,-511.105	1/1:175:0,173,2:0:0:173,2:6127,72:-551.174,-52.0782,0,-545.299,-45.8435,-544.697	1/2:206:0,168,38:0:0:168,38:6014,1326:-598.621,-108.192,-57.6194,-490.779,0,-479.34	1/1:236:0,233,2:0:0:233,2:8251,70:-742.023,-70.14,0,-736.329,-64.3728,-735.727	1/1:188:0,187,0:0:0:187,0:6619,0:-595.426,-56.2926,0,-595.426,-56.2926,-595.426	1/2:362:0,259,102:0:0:259,102:9193,3561:-1038.72,-289.723,-211.756,-749.078,0,-718.373	1/1:274:0,274,0:0:0:274,0:9717,0:-874.469,-82.4822,0,-874.469,-82.4822,-874.469	1/2:15:0,8,7:0:0:8,7:280,237:-42.3392,-19.5518,-17.1436,-23.1311,0,-21.0239	1/1:258:0,257,0:0:0:257,0:9119,0:-820.353,-77.3647,0,-820.353,-77.3647,-820.353	1/2:116:0,80,36:0:0:80,36:2849,1258:-334.876,-102.664,-78.5818,-232.564,0,-221.726	1/2:34:0,26,7:0:0:26,7:924,246:-95.462,-20.1496,-12.3228,-75.438,0,-73.3308	1/2:223:0,171,52:0:0:171,52:6048,1786:-637.961,-145.355,-93.879,-492.952,0,-477.298	1/1:91:0,91,0:0:0:91,0:3212,0:-289.303,-27.3937,0,-289.303,-27.3937,-289.303	1/2:19:0,16,3:0:0:16,3:561,106:-54.6339,-8.98601,-4.16953,-46.0006,0,-45.0976	1/1:21:0,21,0:0:0:21,0:744,0:-67.2843,-6.32163,0,-67.2843,-6.32163,-67.2843	1/2:192:0,145,47:0:0:145,47:5170,1622:-553.554,-132.114,-88.4651,-421.788,0,-407.639	1/1:230:0,229,0:0:0:229,0:8088,0:-727.6,-68.9359,0,-727.6,-68.9359,-727.6	1/2:14:0,5,9:0:0:5,9:180,313:-40.4875,-25.7961,-24.2909,-15.0469,0,-12.3376	1/1:359:0,357,0:0:0:357,0:12669,0:-1139.81,-107.468,0,-1139.81,-107.468,-1139.81	1/1:579:0,573,4:0:0:573,4:20415,134:-1836.4,-172.49,0,-1825.55,-161.649,-1824.34	1/2:273:0,192,80:0:0:192,80:6787,2729:-774.16,-221.405,-163.607,-552.741,0,-528.659	1/2:79:0,60,19:0:0:60,19:2061,618:-217.439,-50.0713,-32.0095,-167.697,0,-161.977	1/1:320:0,318,0:0:0:318,0:11226,0:-1009.96,-95.7275,0,-1009.96,-95.7275,-1009.96	1/1:199:0,196,2:0:0:196,2:6927,72:-623.166,-59.0019,0,-617.291,-53.0663,-616.689	1/1:66:0,66,0:0:0:66,0:2340,0:-210.848,-19.868,0,-210.848,-19.868,-210.848	1/1:162:0,160,0:0:0:160,0:5650,0:-508.328,-48.1648,0,-508.328,-48.1648,-508.328	1/1:237:0,236,1:0:0:236,1:8337,36:-749.979,-71.0431,0,-747.042,-67.7468,-746.741	1/2:33:0,21,12:0:0:21,12:740,414:-94.2289,-33.9771,-27.6554,-60.5994,0,-56.987	1/1:167:0,167,0:0:0:167,0:5879,0:-529.222,-50.272,0,-529.222,-50.272,-529.222	1/2:111:0,83,28:0:0:83,28:2960,951:-318.763,-77.459,-52.4735,-241.647,0,-233.218	1/1:456:0,454,1:0:0:454,1:16059,25:-1444.7,-136.668,0,-1442.75,-134.716,-1442.45	1/1:315:0,315,0:0:0:315,0:11195,0:-1007.42,-94.8245,0,-1007.42,-94.8245,-1007.42	1/2:231:0,175,56:0:0:175,56:6166,1916:-657.443,-155.787,-103.107,-502,0,-485.142	1/1:314:0,313,1:0:0:313,1:11063,33:-995.228,-94.2224,0,-992.56,-91.2243,-992.259	1/1:32:0,32,0:0:0:32,0:1136,0:-102.549,-9.63296,0,-102.549,-9.63296,-102.549	1/1:165:0,165,0:0:0:165,0:5852,0:-526.791,-49.67,0,-526.791,-49.67,-526.791	1/1:211:0,211,0:0:0:211,0:7513,0:-676.202,-63.5173,0,-676.202,-63.5173,-676.202	1/1:300:1,298,0:1:36:298,0:10627,0:-952.727,-86.7695,0,-953.028,-89.7069,-955.966	1/2:258:0,193,62:0:0:193,62:6831,2107:-727.427,-171.007,-112.908,-556.537,0,-537.873	1/1:153:0,153,0:0:0:153,0:5432,0:-488.989,-46.0576,0,-488.989,-46.0576,-488.989	1/2:236:0,156,78:0:0:156,78:5503,2647:-662.764,-214.669,-167.708,-448.118,0,-424.638	1/2:347:0,257,90:0:0:257,90:9112,3051:-990.054,-247.718,-170.354,-742.679,0,-715.586	1/2:94:0,75,19:0:0:75,19:2636,641:-266.836,-52.2665,-29.6892,-214.91,0,-209.19	1/1:182:0,182,0:0:0:182,0:6454,0:-580.925,-54.7875,0,-580.925,-54.7875,-580.925	1/1:176:0,175,1:0:0:175,1:6097,36:-548.448,-52.6803,0,-545.514,-49.3867,-545.213	1/2:84:0,70,14:0:0:70,14:2487,468:-240.889,-38.2185,-17.1464,-203.009,0,-198.794	1/2:133:0,99,34:0:0:99,34:3469,1141:-375.032,-92.7525,-62.9505,-282.619,0,-272.384	1/2:161:0,105,55:0:0:105,55:3706,1889:-455.174,-153.39,-121.782,-301.8,0,-285.243	1/1:283:0,282,0:0:0:282,0:10006,0:-900.062,-84.8905,0,-900.062,-84.8905,-900.062	1/1:266:0,263,0:0:0:263,0:9308,0:-837.384,-79.1709,0,-837.384,-79.1709,-837.384
chr06	32421281	.	T	C	417170	PASS	AB=0.48489;ABP=23.1559;AC=141;AF=0.75;AN=188;AO=15860;CIGAR=1X;DP=21139;DPB=21139;DPRA=0;EPP=34390.5;EPPR=11461.9;GTI=1;LEN=1;MEANALT=1.02128;MQM=54.0219;MQMR=54.8141;NS=94;NUMALT=1;ODDS=1.94893;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=562914;QR=188741;RO=5277;RPL=10442;RPP=3458.82;RPPR=754.076;RPR=5418;RUN=1;SAF=10444;SAP=3464.33;SAR=5416;SRF=3314;SRP=754.076;SRR=1963;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:141:77,64:77:2768:64:2279:-162.07,0,-203.619	0/1:266:110,156:110:3948:156:5553:-418.477,0,-272.054	0/1:323:174,149:174:6240:149:5256:-373.209,0,-455.387	1/1:522:1,521:1:36:521:18428:-1644.67,-153.579,0	1/1:132:4,128:4:144:128:4574:-396.718,-26.4271,0	1/1:119:0,119:0:0:119:4199:-376.74,-35.8226,0	1/1:234:1,233:1:36:233:8229:-734.307,-66.8427,0	0/1:459:235,224:235:8423:224:7966:-574.409,0,-615.804	1/1:223:5,218:5:180:218:7738:-677.631,-50.5776,0	0/1:234:107,127:107:3821:127:4516:-334.735,0,-271.969	0/1:96:47,49:47:1688:49:1748:-127.99,0,-123.138	1/1:174:0,174:0:0:174:6166:-550.919,-52.3792,0	1/1:151:0,151:0:0:151:5373:-479.964,-45.4555,0	0/1:127:62,65:62:2212:65:2322:-170.651,0,-160.714	0/1:136:69,67:69:2457:67:2369:-171.504,0,-178.37	1/1:107:1,106:1:32:106:3752:-333.142,-29.0116,0	1/1:133:0,133:0:0:133:4713:-423.438,-40.037,0	1/1:93:0,93:0:0:93:3316:-297.588,-27.9958,0	0/1:67:34,33:34:1216:33:1175:-84.3711,0,-88.7358	0/1:380:180,200:180:6444:200:7110:-522.053,0,-463.067	1/1:270:0,270:0:0:270:9567:-857.465,-81.2781,0	1/1:250:1,249:1:36:249:8806:-785.794,-71.6592,0	0/1:304:172,132:172:6155:132:4675:-328.388,0,-458.459	1/1:233:1,232:1:36:232:8226:-733.018,-66.5417,0	0/1:164:74,90:74:2647:90:3202:-236.831,0,-187.568	1/1:788:3,785:3:108:785:27808:-2483.29,-227.136,0	0/1:559:273,286:273:9789:286:10177:-741.988,0,-707.755	0/1:89:49,40:49:1760:40:1436:-102.086,0,-130.606	0/1:647:394,253:394:14099:253:8926:-604.22,0,-1068.71	0/1:545:249,296:249:8884:296:10495:-777.551,0,-633.564	0/1:299:134,165:134:4786:165:5884:-438.338,0,-339.012	0/1:8:1,7:1:36:7:252:-20.4959,0,-1.15038	1/1:12:0,12:0:0:12:428:-38.7376,-3.61236,0	1/1:5:0,5:0:0:5:180:-16.5059,-1.50515,0	1/1:14:0,14:0:0:14:500:-45.053,-4.21442,0	1/1:12:0,12:0:0:12:414:-37.1376,-3.61236,0	0/1:361:183,178:183:6530:178:6312:-455.848,0,-476.955	1/1:391:3,388:3:108:388:13777:-1224.15,-107.739,0	0/1:102:56,46:56:2012:46:1643:-117.029,0,-149.741	0/1:10:2,8:2:72:8:288:-23.2446,0,-3.75107	0/1:369:195,174:195:6974:174:6160:-441.992,0,-510.924	0/1:63:37,26:37:1332:26:910:-62.9457,0,-100.682	0/1:388:177,211:177:6329:211:7420:-548.476,0,-449.463	0/1:167:85,82:85:3033:82:2910:-210.333,0,-221.516	1/1:152:0,152:0:0:152:5417:-483.945,-45.7566,0	1/1:231:1,229:1:36:229:8118:-724.153,-66.0129,0	0/1:343:176,167:176:6271:167:5983:-431.303,0,-456.623	1/1:413:2,411:2:72:411:14637:-1303.49,-117.489,0	0/1:248:145,103:145:5170:103:3625:-249.916,0,-388.765	0/1:347:187,160:187:6674:160:5710:-408.666,0,-494.602	1/1:259:0,259:0:0:259:9216:-825.681,-77.9668,0	0/1:12:7,5:7:252:5:180:-12.894,0,-19.2305	1/1:295:1,294:1:36:294:10434:-931.714,-85.2093,0	0/1:136:59,77:59:2116:77:2747:-205.541,0,-148.935	0/1:11:3,8:3:104:8:288:-22.6017,0,-5.80183	1/1:312:2,310:2:72:310:11074:-983.41,-87.0863,0	1/1:101:0,101:0:0:101:3557:-318.77,-30.404,0	1/1:6:0,6:0:0:6:216:-19.3276,-1.80618,0	1/1:18:0,18:0:0:18:639:-57.5806,-5.41854,0	0/1:186:86,100:86:3053:100:3542:-262.279,0,-218.172	1/1:197:1,196:1:36:196:6964:-620.711,-55.7046,0	0/1:10:1,9:1:36:9:324:-26.4277,0,-0.587975	1/1:608:0,607:0:0:607:21578:-1934.79,-182.725,0	1/1:513:4,509:4:144:509:18132:-1611.4,-141.116,0	0/1:244:139,105:139:4967:105:3745:-262.253,0,-372.785	0/1:332:195,137:195:6964:137:4806:-331.663,0,-523.16	1/1:414:1,413:1:36:413:14646:-1308.34,-121.028,0	1/1:363:7,356:7:248:356:12672:-1108.18,-86.6555,0	1/1:48:0,48:0:0:48:1676:-149.214,-14.4494,0	1/1:155:0,155:0:0:155:5508:-494.305,-46.6597,0	1/1:177:1,176:1:36:176:6261:-558.028,-49.684,0	0/1:32:18,14:18:644:14:500:-35.5523,0,-48.3986	1/1:240:0,240:0:0:240:8496:-761.835,-72.2472,0	0/1:129:58,71:58:2084:71:2509:-186.148,0,-147.05	1/1:428:0,428:0:0:428:15188:-1362.93,-128.841,0	0/1:366:205,161:205:7330:161:5709:-401.625,0,-546.981	0/1:290:149,141:149:5343:141:4978:-358.919,0,-390.174	1/1:301:0,301:0:0:301:10687:-957.768,-90.61,0	1/1:14:0,14:0:0:14:504:-45.5363,-4.21442,0	1/1:282:2,280:2:72:280:9993:-889.252,-78.0537,0	1/1:267:1,266:1:36:266:9443:-842.167,-76.8389,0	1/1:401:0,401:0:0:401:14283:-1277.81,-120.713,0	0/1:182:95,87:95:3408:87:3078:-221.5,0,-251.486	1/1:138:0,138:0:0:138:4925:-441.348,-41.5421,0	0/1:140:72,68:72:2572:68:2387:-172.286,0,-188.375	0/1:304:158,146:158:5643:146:5194:-374.368,0,-414.035	0/1:78:35,43:35:1256:43:1510:-111.756,0,-87.5388	0/1:123:59,64:59:2115:64:2268:-166.687,0,-151.116	1/1:128:0,128:0:0:128:4538:-405.485,-38.5318,0	0/1:52:26,26:26:932:26:919:-67.1435,0,-68.0948	0/1:138:70,68:70:2512:68:2432:-175.127,0,-183.172	0/1:152:114,38:114:4064:38:1351:-75.243,0,-316.891	1/1:456:1,455:1:36:455:16056:-1435.85,-133.696,0	1/1:200:0,200:0:0:200:7093:-634.714,-60.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chr06	33194345	.	T	A	7529.58	PASS	AB=0.304659;ABP=742.774;AC=45;AF=0.239362;AN=188;AO=691;CIGAR=1X;DP=5949;DPB=5949;DPRA=0.789352;EPP=1503.5;EPPR=11416.3;GTI=10;LEN=1;MEANALT=1.03704;MQM=59.9305;MQMR=59.9502;NS=94;NUMALT=1;ODDS=0.159498;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=24587;QR=184319;RO=5256;RPL=691;RPP=1503.5;RPPR=11416.3;RPR=0;RUN=1;SAF=691;SAP=1503.5;SAR=0;SRF=5256;SRP=11416.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:19,11:19:655:11:396:-26.9518,0,-50.2402	0/1:19:10,9:10:345:9:324:-23.7863,0,-25.6613	0/1:116:83,33:83:2932:33:1184:-71.9488,0,-229.195	0/0:267:267,0:267:9334:0:0:0,-80.375,-839.779	0/0:28:28,0:28:992:0:0:0,-8.42884,-89.5944	0/0:36:36,0:36:1248:0:0:0,-10.8371,-112.619	0/0:91:91,0:91:3212:0:0:0,-27.3937,-289.304	0/1:82:64,18:64:2264:18:644:-33.6061,0,-179.336	0/0:80:80,0:80:2779:0:0:0,-24.0824,-250.35	0/1:65:41,24:41:1437:24:864:-58.5156,0,-110.057	0/1:29:19,10:19:635:10:360:-24.0144,0,-48.7327	0/0:76:76,0:76:2679:0:0:0,-22.8783,-241.357	0/0:51:51,0:51:1762:0:0:0,-15.3525,-158.859	0/1:30:12,17:12:414:17:603:-45.5101,0,-28.5004	0/1:49:25,24:25:872:24:848:-61.887,0,-64.0432	0/0:47:47,0:47:1633:0:0:0,-14.1484,-147.25	0/0:22:22,0:22:749:0:0:0,-6.62266,-67.724	0/0:23:23,0:23:794:0:0:0,-6.92369,-71.7758	0/1:6:5,1:5:176:1:36:-1.79209,0,-14.3788	0/1:112:89,23:89:3149:23:815:-39.9308,0,-249.921	0/0:89:89,0:89:3116:0:0:0,-26.7917,-280.667	0/0:157:156,1:156:5495:1:36:0,-43.6634,-491.081	0/1:88:53,35:53:1859:35:1237:-85.142,0,-141.096	0/0:59:59,0:59:2081:0:0:0,-17.7608,-187.559	0/1:34:26,8:26:923:8:272:-14.5739,0,-73.1517	0/0:250:250,0:250:8780:0:0:0,-75.2575,-790.198	0/1:97:65,32:65:2258:32:1152:-74.7902,0,-174.279	0/1:16:12,4:12:424:4:144:-8.49714,0,-33.6799	0/1:114:84,30:84:2949:30:1064:-61.7536,0,-231.326	0/1:71:46,25:46:1613:25:900:-59.9479,0,-124.081	0/1:82:61,21:61:2163:21:756:-43.6828,0,-170.252	0/0:7:7,0:7:235:0:0:0,-2.10721,-21.4779	0/0:12:12,0:12:419:0:0:0,-3.61236,-38.0427	0/0:12:12,0:12:407:0:0:0,-3.61236,-36.9555	0/0:9:9,0:9:311:0:0:0,-2.70927,-28.3237	0/0:8:8,0:8:269:0:0:0,-2.40824,-24.5361	0/1:111:77,34:77:2677:34:1193:-74.2589,0,-207.761	0/0:119:119,0:119:4147:0:0:0,-35.8226,-373.419	0/1:20:15,5:15:515:5:180:-10.4903,0,-40.6544	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:90:72,18:72:2509:18:637:-30.5645,0,-198.968	0/1:8:5,2:5:168:2:72:-4.36968,0,-12.9879	0/1:107:86,21:86:3021:21:752:-35.796,0,-239.912	0/1:23:20,3:20:699:3:108:-3.15148,0,-56.3088	0/0:36:36,0:36:1255:0:0:0,-10.8371,-113.191	0/0:97:97,0:97:3420:0:0:0,-29.1999,-308.003	0/1:73:54,19:54:1872:19:667:-38.3794,0,-146.779	0/0:159:158,1:158:5559:1:36:0,-44.2655,-496.842	0/1:26:20,6:20:689:6:212:-11.598,0,-54.5018	0/1:73:52,21:52:1820:21:747:-45.5791,0,-142.103	0/0:97:97,0:97:3374:0:0:0,-29.1999,-303.745	0/1:8:5,3:5:180:3:104:-7.29457,0,-14.1438	0/0:104:104,0:104:3674:0:0:0,-31.3071,-330.864	0/0:41:38,3:38:1343:3:108:0,-2.26706,-111.094	0/1:11:4,7:4:140:7:248:-19.3529,0,-9.63325	0/0:83:83,0:83:2895:0:0:0,-24.9855,-260.783	0/0:29:29,0:29:1004:0:0:0,-8.72987,-90.6676	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:14:14,0:14:495:0:0:0,-4.21442,-44.883	0/1:49:34,15:34:1194:15:513:-31.7418,0,-93.0133	0/0:81:80,1:80:2836:1:36:0,-20.7852,-251.879	0/1:4:1,3:1:32:3:108:-8.87105,0,-1.99519	0/0:188:187,1:187:6622:1:36:0,-52.9954,-592.464	0/0:152:152,0:152:5406:0:0:0,-45.7566,-486.14	0/1:32:24,8:24:856:8:288:-16.6344,0,-67.7281	0/1:49:36,13:36:1253:13:456:-26.6228,0,-98.3168	0/0:105:105,0:105:3684:0:0:0,-31.6081,-331.751	0/0:90:89,1:89:3095:1:36:0,-23.4944,-275.18	0/0:33:32,1:32:1117:1:36:0,-6.33571,-97.2369	0/0:24:23,1:23:806:1:36:0,-3.62644,-69.2599	0/0:20:20,0:20:697:0:0:0,-6.0206,-63.0507	0/1:16:13,3:13:449:3:108:-5.25869,0,-35.921	0/0:89:89,0:89:3111:0:0:0,-26.7917,-280.219	0/1:29:20,9:20:712:9:320:-20.4125,0,-55.3581	0/0:109:109,0:109:3799:0:0:0,-32.8123,-342.109	0/1:96:66,30:66:2347:30:1076:-68.254,0,-182.59	0/1:56:41,15:41:1442:15:516:-29.9057,0,-113.203	0/0:64:63,1:63:2231:1:36:0,-15.6676,-197.456	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:74:74,0:74:2609:0:0:0,-22.2762,-235.056	0/0:130:130,0:130:4588:0:0:0,-39.1339,-413.076	0/0:144:144,0:144:5077:0:0:0,-43.3483,-457.06	0/1:25:17,8:17:599:8:284:-18.3776,0,-46.7123	0/0:64:64,0:64:2245:0:0:0,-19.2659,-202.31	0/1:28:17,11:17:584:11:396:-27.5539,0,-44.4519	0/1:56:38,18:38:1330:18:640:-41.0716,0,-103.141	0/1:16:8,8:8:256:8:288:-21.4509,0,-18.5357	0/1:46:24,22:24:839:22:784:-57.035,0,-61.9799	0/0:48:48,0:48:1641:0:0:0,-14.4494,-147.959	0/1:27:20,7:20:694:7:252:-14.9011,0,-54.6526	0/1:63:43,20:43:1486:20:720:-46.1639,0,-115.064	0/1:45:22,23:22:751:23:815:-60.1244,0,-54.3596	0/0:105:105,0:105:3716:0:0:0,-31.6081,-334.64	0/0:80:80,0:80:2820:0:0:0,-24.0824,-254.039
chr06	33461206	.	ATCC	GTCG	42466.6	PASS	AB=0.501757;ABP=3.14766;AC=45;AF=0.239362;AN=188;AO=2582;CIGAR=1X2M1X;DP=10695;DPB=10695;DPRA=1.0532;EPP=5601.07;EPPR=17542;GTI=0;LEN=4;MEANALT=1.37736;MQM=59.9717;MQMR=59.9993;NS=94;NUMALT=1;ODDS=3.45852;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=91122;QR=284380;RO=8077;RPL=0;RPP=5609.75;RPPR=17542;RPR=2582;RUN=1;SAF=2581;SAP=5601.07;SAR=1;SRF=8077;SRP=17542;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:77:43,33:43:1517:33:1153:-80.9829,0,-113.733	0/1:107:61,45:61:2156:45:1586:-110.829,0,-162.107	0/1:169:84,85:84:2917:85:2996:-218.998,0,-211.892	0/0:235:234,0:234:8263:0:0:0,-70.441,-743.335	0/0:67:67,0:67:2370:0:0:0,-20.169,-213.559	0/0:72:71,1:71:2502:1:32:0,-18.4748,-222.235	0/0:158:158,0:158:5563:0:0:0,-47.5627,-500.805	0/1:169:78,89:78:2718:89:3167:-234.623,0,-194.235	0/0:134:134,0:134:4743:0:0:0,-40.338,-427.035	0/1:89:41,48:41:1455:48:1708:-127.214,0,-104.455	0/1:111:53,58:53:1863:58:1999:-146.765,0,-134.534	0/0:150:150,0:150:5211:0:0:0,-45.1545,-469.141	0/0:109:109,0:109:3869:0:0:0,-32.8123,-348.408	0/1:129:52,76:52:1820:76:2675:-202.112,0,-125.198	0/1:86:44,42:44:1575:42:1471:-106.791,0,-116.153	0/0:101:98,0:98:3467:0:0:0,-29.5009,-311.885	0/0:56:56,0:56:1948:0:0:0,-16.8577,-175.592	0/0:46:46,0:46:1616:0:0:0,-13.8474,-145.727	0/1:74:42,31:42:1509:31:1107:-77.6058,0,-113.77	0/1:223:106,117:106:3755:117:4169:-308.264,0,-271.025	0/0:167:167,0:167:5848:0:0:0,-50.272,-526.446	0/0:95:95,0:95:3342:0:0:0,-28.5978,-301.001	0/1:162:91,71:91:3217:71:2519:-178.195,0,-240.989	0/0:82:80,1:80:2804:1:28:0,-21.8287,-249.835	0/1:132:63,69:63:2214:69:2429:-179.13,0,-159.789	0/0:255:251,2:251:8881:2:72:0,-69.6837,-792.453	0/1:335:164,170:164:5798:170:6014:-440.5,0,-421.078	0/1:40:19,21:19:668:21:753:-56.0554,0,-48.4041	0/1:282:130,150:130:4566:150:5306:-393.029,0,-326.466	0/1:145:81,62:81:2869:62:2168:-151.979,0,-215.044	0/1:136:61,75:61:2131:75:2668:-199.42,0,-151.117	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2078	0/0:26:26,0:26:916:0:0:0,-7.82678,-82.7565	0/0:5:5,0:5:173:0:0:0,-1.50515,-15.9096	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:11:11,0:11:390:0:0:0,-3.31133,-35.4392	0/1:236:108,125:108:3768:125:4419:-327.381,0,-268.824	0/0:142:142,0:142:4997:0:0:0,-42.7463,-449.885	0/1:104:46,58:46:1626:58:2036:-152.205,0,-115.322	0/1:5:3,2:3:107:2:66:-4.7628,0,-8.47702	0/1:162:85,77:85:3005:77:2722:-196.456,0,-221.917	0/0:77:77,0:77:2723:0:0:0,-23.1793,-245.316	0/1:181:90,90:90:3169:90:3173:-231.25,0,-230.894	0/1:111:47,64:47:1648:64:2262:-170.427,0,-115.191	0/0:66:66,0:66:2284:0:0:0,-19.868,-205.822	0/0:102:102,0:102:3581:0:0:0,-30.7051,-322.503	0/1:95:37,57:37:1307:57:2012:-152.696,0,-89.2746	0/0:165:165,0:165:5822:0:0:0,-49.6699,-524.104	0/1:126:56,70:56:1949:70:2474:-184.984,0,-137.754	0/1:203:119,84:119:4241:84:2982:-207.504,0,-320.763	0/0:185:185,0:185:6510:0:0:0,-55.6905,-585.998	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/0:146:146,0:146:5154:0:0:0,-43.9504,-464.009	0/1:115:56,59:56:1978:59:2074:-152.311,0,-143.677	0/1:10:8,2:8:275:2:72:-3.82642,0,-22.0737	0/0:126:126,0:126:4395:0:0:0,-37.9298,-395.732	0/0:59:59,0:59:2080:0:0:0,-17.7608,-187.471	0/1:12:4,8:4:143:8:287:-22.5641,0,-9.60908	0/0:20:20,0:20:702:0:0:0,-6.0206,-63.5039	0/1:113:46,67:46:1638:67:2345:-177.267,0,-113.693	0/0:134:132,2:132:4678:2:72:0,-33.5013,-414.348	0/1:10:8,2:8:274:2:72:-3.82642,0,-21.9825	0/0:144:143,0:143:4997:0:0:0,-43.0473,-449.526	0/0:159:156,2:156:5524:2:72:0,-40.986,-490.505	0/1:115:77,38:77:2693:38:1325:-84.9296,0,-207.997	0/1:96:47,49:47:1639:49:1723:-126.454,0,-118.897	0/0:163:162,0:162:5658:0:0:0,-48.7669,-509.142	0/0:250:249,0:249:8743:0:0:0,-74.9565,-786.67	0/0:129:127,2:127:4484:2:72:0,-31.9961,-396.899	0/0:106:105,0:105:3709:0:0:0,-31.6081,-333.657	0/0:68:68,0:68:2407:0:0:0,-20.47,-216.886	0/1:23:15,8:15:520:8:281:-18.7062,0,-40.2039	0/0:146:145,0:145:5042:0:0:0,-43.6493,-453.578	0/1:55:34,21:34:1205:21:742:-50.547,0,-92.1995	0/0:197:197,0:197:6942:0:0:0,-59.3029,-624.86	0/0:129:128,1:128:4546:1:36:0,-35.2346,-405.711	0/1:92:47,45:47:1631:45:1565:-113.443,0,-119.381	0/0:118:118,0:118:4176:0:0:0,-35.5215,-376.026	0/0:16:16,0:16:571:0:0:0,-4.81648,-51.7234	0/0:153:153,0:153:5421:0:0:0,-46.0576,-488.026	0/0:84:83,1:83:2911:1:24:0,-22.8866,-259.828	0/0:229:228,0:228:8032:0:0:0,-68.6348,-722.559	0/1:84:41,43:41:1443:43:1536:-113.247,0,-104.878	0/0:130:130,0:130:4624:0:0:0,-39.1339,-416.326	0/1:63:30,30:30:1049:30:1060:-77.2897,0,-76.299	0/1:167:93,74:93:3307:74:2621:-185.865,0,-247.579	0/1:24:11,13:11:386:13:467:-35.1445,0,-27.8514	0/1:94:40,53:40:1406:53:1859:-139.272,0,-98.5206	0/0:89:89,0:89:3138:0:0:0,-26.7917,-282.648	0/1:91:43,47:43:1507:47:1674:-123.642,0,-108.617	0/1:185:93,92:93:3272:92:3269:-238.74,0,-239.014	0/1:75:29,46:29:997:46:1564:-118.469,0,-67.4611	0/0:113:112,0:112:3908:0:0:0,-33.7154,-351.71	0/0:148:148,0:148:5217:0:0:0,-44.5524,-469.677
chr06	33685493	.	AGCTA	GGCTG,GGCTA	387379	PASS	AB=0.489455,0.503835;ABP=10.063,3.94289;AC=144,44;AF=0.765957,0.234043;AN=188;AO=14318,3715;CIGAR=1X3M1X,1X4M;DP=18144;DPB=18144.2;DPRA=0,1.28454;EPP=31042.1,8035.32;EPPR=5.18177;GTI=1;LEN=5,1;MEANALT=2.64894,3.08621;MQM=59.7475,59.9731;MQMR=60;NS=94;NUMALT=2;ODDS=2.64215;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=32,0;PQR=0;PRO=0;QA=504216,132737;QR=36;RO=1;RPL=5,4;RPP=31050.7,8035.32;RPPR=5.18177;RPR=14313,3711;RUN=1,1;SAF=14317,3715;SAP=31085.5,8070.03;SAR=1,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:119:0,74,45:0:0:74,45:2579,1590:-339.279,-129.84,-107.564,-209.79,0,-196.243	1/2:228:0,106,120:0:0:106,120:3775,4301:-658.444,-350.781,-318.872,-307.66,0,-271.537	1/2:187:0,77,110:0:0:77,110:2710,3921:-540.577,-319.969,-296.79,-220.962,0,-187.848	1/1:392:0,389,0:0:0:389,0:13662,0:-1229,-117.101,0,-1229,-117.101,-1229	1/1:228:0,225,1:0:0:225,1:7940,36:-714.279,-67.7318,0,-711.342,-64.7794,-711.041	1/1:282:0,281,1:0:0:281,1:9897,36:-890.079,-84.5894,0,-887.142,-81.2922,-886.841	1/1:286:0,286,0:0:0:286,0:10106,0:-909.461,-86.0946,0,-909.461,-86.0946,-909.461	1/2:356:0,146,205:0:0:146,205:5139,7296:-1013.03,-594.684,-550.734,-418.408,0,-356.697	1/1:265:0,263,0:0:0:263,0:9216,0:-829.076,-79.1709,0,-829.076,-79.1709,-829.076	1/2:166:0,82,81:0:0:82,81:2896,2904:-472.744,-236.91,-212.226,-235.887,0,-211.503	1/2:44:0,24,20:0:0:24,20:853,720:-128.616,-59.1082,-51.8835,-69.8656,0,-63.845	1/1:75:0,74,0:0:0:74,0:2631,0:-236.672,-22.2762,0,-236.672,-22.2762,-236.672	1/1:66:0,66,0:0:0:66,0:2346,0:-211.395,-19.868,0,-211.395,-19.868,-211.395	1/2:76:0,35,41:0:0:35,41:1221,1453:-218.022,-118.722,-108.186,-99.6514,0,-87.3092	1/2:84:0,46,38:0:0:46,38:1638,1368:-245.485,-111.982,-98.1343,-133.861,0,-122.422	1/1:52:0,52,0:0:0:52,0:1852,0:-166.88,-15.6536,0,-166.88,-15.6536,-166.88	1/1:77:0,77,0:0:0:77,0:2690,0:-242.259,-23.1793,0,-242.259,-23.1793,-242.259	1/1:87:0,87,0:0:0:87,0:3092,0:-278.396,-26.1896,0,-278.396,-26.1896,-278.396	1/2:34:0,11,23:0:0:11,23:393,820:-99.2365,-67.1973,-63.886,-32.3961,0,-25.4724	1/2:325:0,128,196:0:0:128,196:4540,7021:-942.49,-572.608,-534.076,-369.898,0,-310.896	1/1:290:0,286,4:0:0:286,4:10043,144:-903.416,-86.0946,0,-891.666,-73.9851,-890.462	1/1:366:0,363,1:0:0:363,1:12795,36:-1150.86,-109.274,0,-1147.92,-106.328,-1147.62	1/2:363:0,158,203:0:0:158,203:5538,7281:-1044.46,-593.868,-546.305,-450.582,0,-389.473	1/1:370:0,359,8:0:0:359,8:12713,288:-1143.6,-108.07,0,-1120.1,-84.5629,-1117.7	1/2:168:0,101,63:0:0:101,63:3523,2248:-469.825,-183.309,-152.905,-286.56,0,-267.595	1/1:771:0,762,4:0:0:762,4:26784,144:-2409.26,-229.385,0,-2397.51,-217.624,-2396.3	1/2:378:0,170,205:0:0:170,205:6015,7329:-1087.49,-597.598,-546.423,-489.911,0,-428.2	1/2:42:0,26,16:0:0:26,16:923,576:-122.561,-47.3585,-39.5317,-75.5603,0,-70.7439	1/2:480:0,254,223:0:0:254,223:9009,7936:-1380.68,-646.783,-570.322,-733.907,0,-666.777	1/2:357:0,201,154:0:0:201,154:6987,5512:-1017.4,-449.496,-388.989,-567.907,0,-521.548	1/2:346:0,185,159:0:0:185,159:6513,5678:-993.084,-462.913,-407.223,-530.165,0,-482.301	1/1:21:0,21,0:0:0:21,0:748,0:-67.6454,-6.32163,0,-67.6454,-6.32163,-67.6454	1/1:38:0,37,0:0:0:37,0:1308,0:-117.652,-11.1381,0,-117.652,-11.1381,-117.652	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/1:16:0,15,0:0:0:15,0:525,0:-47.1673,-4.51545,0,-47.1673,-4.51545,-47.1673	1/1:15:0,15,0:0:0:15,0:521,0:-47.218,-4.51545,0,-47.218,-4.51545,-47.218	1/2:242:0,120,121:0:0:120,121:4253,4295:-696.334,-349.866,-313.743,-346.462,0,-310.038	1/1:460:0,458,1:0:0:458,1:15973,36:-1436.83,-137.872,0,-1433.9,-134.904,-1433.59	1/2:50:0,28,21:0:0:28,21:980,748:-140.68,-60.964,-52.5352,-79.7095,0,-73.3879	1/2:5:0,2,3:0:0:2,3:72,108:-15.0469,-9.17208,-8.57002,-6.23466,0,-5.33157	1/2:316:0,150,161:0:0:150,161:5323,5777:-904.91,-471.254,-426.1,-433.691,0,-385.225	1/1:34:0,34,0:0:0:34,0:1207,0:-108.927,-10.235,0,-108.927,-10.235,-108.927	1/2:424:0,194,226:0:0:194,226:6839,8101:-1217.4,-660.711,-602.311,-556.681,0,-488.648	1/2:133:0,66,67:0:0:66,67:2330,2408:-386.449,-196.807,-176.939,-189.998,0,-169.829	1/1:59:0,59,0:0:0:59,0:2097,0:-188.925,-17.7608,0,-188.925,-17.7608,-188.925	1/1:258:0,256,0:0:0:256,0:9047,0:-813.798,-77.0637,0,-813.798,-77.0637,-813.798	1/2:242:0,102,138:0:0:102,138:3588,4892:-690.631,-398.572,-367.867,-292.096,0,-250.554	1/1:467:0,461,3:0:0:461,3:16214,108:-1458.06,-138.775,0,-1449.25,-129.943,-1448.35	1/1:304:0,300,0:0:0:300,0:10552,0:-949.225,-90.309,0,-949.225,-90.309,-949.225	1/2:285:0,146,139:0:0:146,139:5160,4985:-827.183,-406.952,-363.002,-420.587,0,-378.744	1/1:445:0,443,0:0:0:443,0:15523,0:-1396.34,-133.356,0,-1396.34,-133.356,-1396.34	1/2:14:0,6,8:0:0:6,8:208,288:-40.7593,-23.8592,-22.053,-17.2523,0,-14.8441	1/1:232:0,230,0:0:0:230,0:8086,0:-727.413,-69.2369,0,-727.413,-69.2369,-727.413	1/2:90:0,45,44:0:0:45,44:1574,1565:-255.514,-127.535,-113.988,-127.972,0,-114.727	1/2:65:0,37,28:0:0:37,28:1293,1008:-187.784,-82.6075,-71.4694,-105.532,0,-97.1027	1/1:16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chr06	33772630	.	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chr06	34845624	.	A	G	188000	PASS	AB=0.51497;ABP=12.7624;AC=144;AF=0.765957;AN=188;AO=8974;CIGAR=1X;DP=11435;DPB=11435;DPRA=0;EPP=19481.1;EPPR=5323.12;GTI=0;LEN=1;MEANALT=1.10638;MQM=54.027;MQMR=59.611;NS=94;NUMALT=1;ODDS=3.41119;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=317852;QR=86953;RO=2450;RPL=1;RPP=19481.1;RPPR=5323.12;RPR=8973;RUN=1;SAF=0;SAP=19489.8;SAR=8974;SRF=0;SRP=5323.12;SRR=2450;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:26:14,12:14:504:12:428:-30.9327,0,-37.8372	0/1:184:76,108:76:2703:108:3829:-287.56,0,-188.068	0/1:215:114,101:114:4062:101:3586:-256.285,0,-300.639	1/1:301:0,301:0:0:301:10645:-956.365,-90.61,0	1/1:91:3,88:3:104:88:3135:-271.436,-17.6909,0	1/1:51:0,51:0:0:51:1785:-160.486,-15.3525,0	1/1:163:0,163:0:0:163:5777:-518.469,-49.0679,0	0/1:181:89,92:89:3175:92:3279:-237.281,0,-231.46	1/1:74:0,74:0:0:74:2617:-235.045,-22.2762,0	0/1:88:52,36:52:1856:36:1278:-88.626,0,-140.796	0/1:38:19,19:19:648:19:676:-49.602,0,-47.1801	1/1:47:0,47:0:0:47:1679:-150.624,-14.1484,0	1/1:48:0,48:0:0:48:1695:-152.344,-14.4494,0	0/1:76:41,35:41:1449:35:1228:-87.6667,0,-107.826	0/1:52:28,24:28:991:24:864:-62.0592,0,-73.8476	1/1:37:0,37:0:0:37:1294:-116.344,-11.1381,0	1/1:56:0,56:0:0:56:1999:-179.661,-16.8577,0	1/1:45:0,45:0:0:45:1592:-142.563,-13.5464,0	0/1:20:7,13:7:240:13:456:-34.9313,0,-15.9141	0/1:409:207,202:207:7304:202:7143:-518.503,0,-534.272	1/1:127:1,126:1:32:126:4397:-391.752,-35.064,0	1/1:194:0,192:0:0:192:6838:-614.167,-57.7978,0	0/1:102:54,48:54:1936:48:1685:-120.759,0,-143.802	1/1:121:0,121:0:0:121:4297:-385.547,-36.4246,0	0/1:90:50,40:50:1792:40:1410:-99.889,0,-134.459	1/1:285:0,285:0:0:285:10121:-908.88,-85.7936,0	0/1:252:127,125:127:4481:125:4446:-323.42,0,-327.379	0/1:25:17,8:17:599:8:275:-17.5259,0,-46.7123	0/1:455:186,269:186:6622:269:9502:-717.12,0,-458.622	0/1:186:90,96:90:3191:96:3398:-248.706,0,-231.394	0/1:178:86,92:86:3054:92:3308:-243.638,0,-221.305	1/1:16:0,16:0:0:16:559:-50.5128,-4.81648,0	1/1:24:0,24:0:0:24:851:-76.8055,-7.22472,0	1/1:10:0,10:0:0:10:326:-29.5914,-3.0103,0	1/1:7:0,7:0:0:7:252:-22.9711,-2.10721,0	1/1:33:0,33:0:0:33:1171:-104.934,-9.93399,0	0/1:156:78,78:78:2783:78:2776:-202.868,0,-203.748	1/1:326:2,324:2:72:324:11539:-1028.14,-91.2991,0	0/1:35:20,14:20:695:14:491:-33.021,0,-52.2707	0/1:7:3,4:3:108:4:144:-11.1875,0,-7.96796	0/1:218:99,119:99:3526:119:4201:-310.661,0,-251.89	1/1:45:0,45:0:0:45:1571:-141.475,-13.5464,0	0/1:196:106,89:106:3755:89:3079:-217.262,0,-279.063	0/1:41:20,21:20:716:21:752:-55.6161,0,-52.4246	1/1:43:0,43:0:0:43:1507:-135.811,-12.9443,0	1/1:118:1,117:1:36:117:4165:-371.063,-31.9233,0	0/1:212:105,107:105:3744:107:3818:-278.332,0,-273.279	1/1:279:4,274:4:144:274:9705:-857.764,-70.7323,0	1/1:159:0,159:0:0:159:5637:-505.56,-47.8638,0	0/1:215:102,113:102:3615:113:4048:-299.109,0,-260.826	1/1:252:0,251:0:0:251:8909:-800.329,-75.5585,0	0/1:18:8,10:8:288:10:351:-26.4866,0,-20.8489	1/1:229:0,229:0:0:229:8120:-728.074,-68.9359,0	0/1:64:33,31:33:1166:31:1112:-81.0248,0,-85.9755	0/1:18:5,13:5:180:13:453:-35.4181,0,-11.1335	0/1:209:101,107:101:3603:107:3765:-275.022,0,-261.406	1/1:47:0,47:0:0:47:1672:-150.293,-14.1484,0	0/1:16:9,7:9:324:7:252:-18.1745,0,-24.6894	1/1:18:0,18:0:0:18:648:-58.517,-5.41854,0	0/1:100:32,68:32:1144:68:2406:-186.023,0,-73.0912	1/1:81:0,81:0:0:81:2864:-257.518,-24.3834,0	0/1:13:6,7:6:212:7:252:-19.099,0,-15.5089	1/1:287:0,286:0:0:286:10118:-908.043,-86.0946,0	1/1:281:2,279:2:72:279:9921:-883.737,-77.7527,0	0/1:89:47,42:47:1671:42:1487:-106.671,0,-123.835	0/1:151:75,76:75:2641:76:2695:-197.15,0,-192.48	1/1:208:8,200:8:284:200:7063:-608.041,-36.7109,0	1/1:170:1,169:1:36:169:6000:-535.734,-47.5768,0	1/1:29:0,29:0:0:29:1023:-92.1111,-8.72987,0	1/1:86:0,86:0:0:86:3055:-272.491,-25.8886,0	1/1:61:0,61:0:0:61:2166:-194.404,-18.3628,0	0/1:29:11,18:11:387:18:640:-49.0174,0,-26.4361	1/1:161:0,161:0:0:161:5677:-507.164,-48.4658,0	0/1:83:42,41:42:1492:41:1441:-104.551,0,-109.568	1/1:217:0,216:0:0:216:7609:-683,-65.0225,0	1/1:284:0,284:0:0:284:10108:-907.484,-85.4925,0	0/1:145:67,78:67:2361:78:2730:-201.399,0,-169.09	1/1:194:0,194:0:0:194:6897:-617.224,-58.3998,0	1/1:19:0,19:0:0:19:665:-59.8324,-5.71957,0	1/1:177:0,176:0:0:176:6240:-559.555,-52.9813,0	1/1:222:0,222:0:0:222:7790:-697.731,-66.8287,0	1/1:289:1,288:1:36:288:10194:-911.799,-83.4309,0	0/1:87:36,51:36:1288:51:1796:-135.308,0,-90.0316	1/1:55:0,55:0:0:55:1959:-176.42,-16.5567,0	0/1:63:32,31:32:1139:31:1078:-78.1348,0,-83.7189	0/1:81:39,42:39:1379:42:1489:-109.485,0,-100.02	0/1:32:16,16:16:576:16:568:-41.5092,0,-42.542	1/1:64:0,64:0:0:64:2257:-201.818,-19.2659,0	1/1:38:0,38:0:0:38:1364:-122.372,-11.4391,0	0/1:41:14,27:14:491:27:956:-73.6758,0,-32.1696	0/1:62:31,31:31:1086:31:1112:-81.1997,0,-79.3617	0/1:52:33,19:33:1160:19:671:-45.0165,0,-89.0531	1/1:169:0,168:0:0:168:5953:-534.334,-50.573,0	1/1:87:0,87:0:0:87:3072:-276.26,-26.1896,0
chr06	35477980	.	TG	AT,TT	512180	PASS	AB=0.517181,0.481608;ABP=26.29,29.6888;AC=142,46;AF=0.755319,0.244681;AN=188;AO=14241,4409;CIGAR=2X,1M1X;DP=18680;DPB=18681;DPRA=0,1.39039;EPP=30692.9,9490.37;EPPR=7.35324;GTI=2;LEN=2,1;MEANALT=1.89362,2.22581;MQM=59.9178,59.9741;MQMR=60;NS=94;NUMALT=2;ODDS=5.81922;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=68,0;PQR=0;PRO=0;QA=505248,157668;QR=72;RO=2;RPL=7448,2299;RPP=68.4282,20.6032;RPPR=7.35324;RPR=6793,2110;RUN=1,1;SAF=7421,2289;SAP=58.0863,17.0769;SAR=6820,2120;SRF=2;SRP=7.35324;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:166:0,82,84:0:0:82,84:2893,3020:-482.295,-246.743,-222.059,-235.908,0,-210.621	1/2:277:0,142,135:0:0:142,135:5074,4831:-808.007,-394.305,-351.559,-414.059,0,-373.42	1/2:417:0,223,193:0:0:223,193:7850,6892:-1200.91,-561.996,-494.866,-639.017,0,-580.919	1/1:476:0,473,3:0:0:473,3:16808,108:-1511.96,-142.387,0,-1503.14,-133.215,-1502.24	1/1:172:0,171,1:0:0:171,1:6079,36:-546.817,-51.4761,0,-543.88,-48.1789,-543.579	1/1:137:0,137,0:0:0:137,0:4843,0:-436.017,-41.2411,0,-436.017,-41.2411,-436.017	1/1:265:0,265,0:0:0:265,0:9401,0:-845.932,-79.773,0,-845.932,-79.773,-845.932	1/2:396:0,216,180:0:0:216,180:7645,6400:-1144.37,-521.816,-456.793,-622.908,0,-568.722	1/2:239:0,140,99:0:0:140,99:4949,3556:-693.427,-290.445,-248.301,-403.338,0,-373.536	1/2:195:0,105,90:0:0:105,90:3735,3218:-567.134,-262.748,-231.14,-304.742,0,-277.649	1/2:107:0,45,61:0:0:45,61:1603,2175:-307.951,-177.293,-163.747,-130.654,0,-112.292	1/1:176:0,175,0:0:0:175,0:6216,0:-559.274,-52.6803,0,-559.274,-52.6803,-559.274	1/1:169:0,169,0:0:0:169,0:6016,0:-541.546,-50.8741,0,-541.546,-50.8741,-541.546	1/2:156:0,70,85:0:0:70,85:2490,3019:-448.916,-245.992,-224.92,-202.92,0,-177.332	1/2:158:1,79,78:1:36:79,78:2825,2799:-455.419,-225.371,-204.527,-227.41,0,-206.867	1/1:108:0,105,0:0:0:105,0:3695,0:-332.336,-31.6082,0,-332.336,-31.6082,-332.336	1/1:126:0,126,0:0:0:126,0:4478,0:-403.19,-37.9298,0,-403.19,-37.9298,-403.19	1/1:124:0,124,0:0:0:124,0:4422,0:-398.144,-37.3277,0,-398.144,-37.3277,-398.144	1/2:56:0,34,22:0:0:34,22:1198,783:-161.704,-64.1703,-53.9353,-97.8884,0,-91.2657	1/2:351:0,172,179:0:0:172,179:6082,6419:-1019.15,-523.911,-472.134,-495.598,0,-441.713	1/2:350:0,186,163:0:0:186,163:6530,5849:-1008.33,-476.929,-420.938,-531.51,0,-482.442	1/1:178:0,178,0:0:0:178,0:6363,0:-572.746,-53.5833,0,-572.746,-53.5833,-572.746	1/2:138:0,68,70:0:0:68,70:2414,2485:-399.521,-202.83,-182.36,-197.046,0,-175.973	1/1:145:0,138,7:0:0:138,7:4894,237:-440.27,-41.5421,0,-421.058,-21.9903,-418.95	1/2:177:0,102,75:0:0:102,75:3576,2672:-509.128,-218.146,-187.441,-291.336,0,-268.758	1/1:500:0,499,0:0:0:499,0:17743,0:-1595.67,-150.214,0,-1595.67,-150.214,-1595.67	1/2:687:0,364,322:0:0:364,322:12945,11518:-1994.13,-939.194,-829.619,-1054.93,0,-957.999	1/2:61:0,34,27:0:0:34,27:1209,954:-176.568,-78.0462,-67.8111,-98.8756,0,-90.7478	1/2:477:0,258,219:0:0:258,219:9205,7810:-1386.91,-637.003,-559.337,-750.265,0,-684.339	1/2:236:0,127,109:0:0:127,109:4460,3889:-680.354,-317.369,-279.138,-363.339,0,-330.527	1/2:163:0,91,72:0:0:91,72:3221,2588:-473.854,-211.494,-184.101,-262.717,0,-241.043	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:31:0,30,0:0:0:30,0:1057,0:-95.0799,-9.0309,0,-95.0799,-9.0309,-95.0799	1/1:16:0,16,0:0:0:16,0:563,0:-50.9989,-4.81648,0,-50.9989,-4.81648,-50.9989	1/1:14:0,11,0:0:0:11,0:392,0:-35.2612,-3.31133,0,-35.2612,-3.31133,-35.2612	1/1:24:0,24,0:0:0:24,0:837,0:-75.6453,-7.22472,0,-75.6453,-7.22472,-75.6453	1/2:337:0,160,176:0:0:160,176:5686,6308:-977.595,-514.47,-466.305,-463.122,0,-410.141	1/1:183:0,183,0:0:0:183,0:6417,0:-577.623,-55.0885,0,-577.623,-55.0885,-577.623	1/2:79:0,37,42:0:0:37,42:1315,1499:-229.717,-122.561,-111.422,-107.513,0,-94.8696	1/2:6:0,3,3:0:0:3,3:108,108:-17.9843,-9.17208,-8.26899,-9.17208,0,-8.26899	1/2:317:0,144,173:0:0:144,173:5117,6176:-920.829,-503.858,-460.509,-417.327,0,-365.249	1/1:63:0,63,0:0:0:63,0:2242,0:-202.043,-18.9649,0,-202.043,-18.9649,-202.043	1/2:322:0,160,162:0:0:160,162:5695,5816:-938.614,-474.784,-426.619,-464.187,0,-415.42	1/2:114:0,57,57:0:0:57,57:2046,2044:-333.968,-167.073,-149.914,-167.253,0,-150.095	1/1:147:1,146,0:1:36:146,0:5132,0:-458.429,-40.6531,0,-458.73,-43.9504,-461.667	1/1:206:0,206,0:0:0:206,0:7281,0:-655.299,-62.0122,0,-655.299,-62.0122,-655.299	1/2:305:0,159,146:0:0:159,146:5637,5236:-886.467,-427.426,-379.562,-459.397,0,-415.447	1/1:481:0,477,2:0:0:477,2:16921,72:-1522.03,-143.591,0,-1516.15,-137.716,-1515.55	1/1:247:0,247,0:0:0:247,0:8717,0:-784.525,-74.3544,0,-784.525,-74.3544,-784.525	1/2:312:0,187,124:0:0:187,124:6652,4407:-901.331,-359.223,-302.931,-542.212,0,-504.884	1/1:265:0,264,1:0:0:264,1:9394,36:-845.061,-79.4719,0,-842.124,-76.1747,-841.823	1/2:22:0,12,10:0:0:12,10:432,360:-64.983,-29.734,-26.1216,-35.6088,0,-32.5985	1/1:304:0,302,0:0:0:302,0:10720,0:-964.353,-90.9111,0,-964.353,-90.9111,-964.353	1/2:106:0,49,57:0:0:49,57:1725,2048:-307.857,-167.433,-152.682,-140.779,0,-123.621	1/2:10:0,9,1:0:0:9,1:302,36:-27.7349,-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chr06	35958090	.	TCG	GCA	12480.2	PASS	AB=0.301625;ABP=1012.73;AC=39;AF=0.207447;AN=188;AO=904;CIGAR=1X1M1X;DP=7777;DPB=7948.33;DPRA=0.920247;EPP=1318.38;EPPR=2190.44;GTI=7;LEN=3;MEANALT=1.17021;MQM=59.583;MQMR=59.9947;NS=94;NUMALT=1;ODDS=1.46136;PAIRED=0;PAIREDR=0;PAO=514;PQA=17976;PQR=0;PRO=0;QA=31689;QR=238394;RO=6856;RPL=904;RPP=1966.02;RPPR=14674.3;RPR=0;RUN=1;SAF=82;SAP=1318.38;SAR=822;SRF=4717;SRP=2108;SRR=2139;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:20:15,5:15:528:5:180:-10.5231,0,-41.8301	0/1:46:28,18:28:966:18:638:-43.9018,0,-73.4043	0/1:48:35,13:35:1239:13:452:-26.5579,0,-97.3649	0/0:72:72,0:72:2493:0:0:0,-21.6742,-224.623	0/0:19:19,0:19:669:0:0:0,-5.71957,-60.5362	0/0:25:25,0:25:853:0:0:0,-7.52575,-77.081	0/0:74:74,0:74:2570:0:0:0,-22.2762,-231.55	0/1:63:32,29:32:1099:29:1003:-71.848,0,-80.4933	0/1:62:45,15:45:1503:15:535:-30.0633,0,-117.135	0/1:43:26,17:26:896:17:610:-41.9312,0,-67.6537	0/1:150:129,20:129:4524:20:706:-18.5746,0,-362.133	0/0:137:135,0:135:4636:0:0:0,-40.639,-417.057	0/1:84:52,32:52:1827:32:1137:-77.3532,0,-139.424	0/1:80:45,35:45:1536:35:1198:-83.6876,0,-114.101	0/1:63:45,18:45:1559:18:638:-38.4327,0,-121.287	0/0:97:97,0:97:3382:0:0:0,-29.1999,-304.595	0/0:94:94,0:94:3205:0:0:0,-28.2968,-288.677	0/0:77:77,0:77:2653:0:0:0,-23.1793,-239.017	0/1:139:125,14:125:4341:14:494:-2.94967,0,-349.031	0/1:50:37,13:37:1285:13:461:-26.4205,0,-100.548	0/1:61:41,20:41:1406:20:665:-41.4503,0,-108.123	0/0:21:21,0:21:730:0:0:0,-6.32163,-66.0206	0/1:36:24,12:24:795:12:432:-28.0246,0,-60.6714	0/0:62:60,2:60:2100:2:72:0,-12.1816,-182.441	0/0:26:24,2:24:848:2:70:0,-1.52973,-69.9905	0/0:110:110,0:110:3798:0:0:0,-33.1133,-342.027	0/1:74:50,24:50:1705:24:822:-51.6641,0,-131.106	0/1:25:16,8:16:551:8:288:-18.6919,0,-42.3506	0/1:64:32,32:32:1084:32:1093:-79.0477,0,-78.2369	0/1:34:25,9:25:869:9:324:-18.912,0,-67.9365	0/1:38:26,11:26:871:11:393:-24.2183,0,-67.2109	0/0:167:167,0:167:5859:0:0:0,-50.272,-527.431	0/0:205:205,0:205:7236:0:0:0,-61.7111,-651.307	0/0:141:141,0:141:4961:0:0:0,-42.4452,-446.647	0/0:401:401,0:401:14027:0:0:0,-120.713,-1262.11	0/0:290:289,0:289:10107:0:0:0,-86.9977,-909.228	0/1:211:112,98:112:3830:98:3428:-245.163,0,-281.328	0/0:25:25,0:25:862:0:0:0,-7.52575,-77.8937	0/1:148:114,34:114:3994:34:1210:-64.2693,0,-314.742	0/0:65:65,0:65:2236:0:0:0,-19.5669,-201.502	0/1:52:30,22:30:1028:22:776:-54.1463,0,-76.8175	0/0:164:164,0:164:5741:0:0:0,-49.3689,-516.822	0/1:37:28,9:28:972:9:308:-16.5595,0,-76.3043	0/1:101:55,46:55:1931:46:1624:-115.612,0,-143.309	0/0:86:86,0:86:3023:0:0:0,-25.8886,-272.303	0/0:27:26,1:26:910:1:36:0,-4.52953,-78.6167	0/1:34:19,15:19:634:15:537:-38.4221,0,-47.1365	0/0:63:63,0:63:2173:0:0:0,-18.9649,-195.477	0/0:45:45,0:45:1588:0:0:0,-13.5463,-143.211	0/1:36:17,19:17:595:19:671:-49.5414,0,-42.7027	0/0:61:61,0:61:2083:0:0:0,-18.3628,-187.739	0/0:90:90,0:90:3154:0:0:0,-27.0927,-283.729	0/0:50:49,0:49:1730:0:0:0,-14.7505,-155.663	0/1:21:9,12:9:320:12:417:-31.5393,0,-22.8209	0/0:47:46,0:46:1601:0:0:0,-13.8474,-144.019	0/1:32:19,13:19:653:13:459:-31.656,0,-49.1051	0/0:28:28,0:28:965:0:0:0,-8.42884,-87.1586	0/0:53:52,1:52:1847:1:34:0,-12.5557,-163.112	0/0:110:110,0:110:3806:0:0:0,-33.1133,-342.744	0/1:44:30,14:30:1040:14:479:-29.8633,0,-80.3395	0/0:101:101,0:101:3503:0:0:0,-30.404,-315.488	0/0:50:50,0:50:1729:0:0:0,-15.0515,-155.892	0/0:18:18,0:18:615:0:0:0,-5.41854,-55.67	0/0:55:54,0:54:1880:0:0:0,-16.2556,-169.118	0/1:38:21,17:21:690:17:608:-43.2791,0,-50.6358	0/1:14:9,5:9:309:5:172:-11.2593,0,-23.5861	0/0:67:66,1:66:2295:1:36:0,-16.9306,-203.213	0/0:62:62,0:62:2172:0:0:0,-18.6639,-195.386	0/0:334:332,1:332:11574:1:36:0,-97.0045,-1037.96	0/0:27:26,0:26:874:0:0:0,-7.82678,-78.6068	0/0:100:100,0:100:3437:0:0:0,-30.103,-309.547	0/0:88:84,4:84:2946:4:129:0,-14.9067,-253.432	0/0:38:38,0:38:1295:0:0:0,-11.4391,-116.844	0/1:30:23,7:23:777:7:248:-13.2744,0,-60.8523	0/0:42:42,0:42:1430:0:0:0,-12.6433,-128.988	0/0:54:54,0:54:1895:0:0:0,-16.2556,-170.827	0/0:41:41,0:41:1399:0:0:0,-12.3422,-126.201	0/0:46:46,0:46:1615:0:0:0,-13.8474,-145.637	0/0:116:115,1:115:4022:1:36:0,-31.3212,-358.576	0/0:58:58,0:58:2017:0:0:0,-17.4597,-181.802	0/0:31:31,0:31:1045:0:0:0,-9.33193,-94.3498	0/0:100:100,0:100:3470:0:0:0,-30.103,-312.518	0/1:96:60,36:60:2072:36:1247:-83.2766,0,-157.504	0/0:97:97,0:97:3408:0:0:0,-29.1999,-306.939	0/1:111:52,59:52:1825:59:2060:-151.901,0,-130.763	0/1:145:101,44:101:3497:44:1543:-94.9612,0,-270.946	0/1:28:17,11:17:594:11:385:-26.1872,0,-44.9998	0/0:106:106,0:106:3697:0:0:0,-31.9092,-332.94	0/0:94:94,0:94:3244:0:0:0,-28.2968,-292.183	0/1:203:180,22:180:6306:22:780:-9.35611,0,-506.491	0/1:317:283,34:283:9903:34:1187:-11.2037,0,-795.462	0/1:76:47,29:47:1648:29:1032:-69.9607,0,-125.378	0/0:9:9,0:9:297:0:0:0,-2.70927,-27.0499	0/0:157:157,0:157:5487:0:0:0,-47.2617,-493.97
chr07	138980	.	C	A	51344.6	PASS	AB=0.519406;ABP=21.7199;AC=50;AF=0.265957;AN=188;AO=2981;CIGAR=1X;DP=10094;DPB=10094;DPRA=1.19243;EPP=6398.23;EPPR=15058;GTI=0;LEN=1;MEANALT=1.08772;MQM=59.9973;MQMR=59.9986;NS=94;NUMALT=1;ODDS=0.314137;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=106561;QR=253562;RO=7108;RPL=2972;RPP=6398.23;RPPR=15049.4;RPR=9;RUN=1;SAF=0;SAP=6476.17;SAR=2981;SRF=1;SRP=15429.2;SRR=7107;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:71:29,42:29:1019:42:1492:-113.201,0,-70.6482	0/1:89:37,52:37:1332:52:1853:-140.256,0,-93.3907	0/1:201:101,100:101:3573:100:3572:-261.179,0,-261.272	0/1:132:62,70:62:2208:70:2514:-186.776,0,-159.249	0/0:122:121,1:121:4329:1:36:0,-33.1274,-386.186	0/0:59:59,0:59:2108:0:0:0,-17.7608,-189.989	0/1:129:73,56:73:2587:56:2016:-142.88,0,-194.244	0/0:155:154,1:154:5506:1:36:0,-43.0614,-492.067	0/0:179:179,0:179:6396:0:0:0,-53.8844,-575.73	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/1:101:47,54:47:1676:54:1932:-143.753,0,-120.723	0/1:118:55,63:55:1952:63:2228:-165.26,0,-140.432	0/1:81:39,42:39:1376:42:1508:-111.631,0,-99.7525	0/1:106:61,45:61:2172:45:1603:-112.65,0,-163.837	0/0:84:84,0:84:3024:0:0:0,-25.2865,-272.389	0/1:62:29,33:29:1035:33:1180:-87.8442,0,-74.7992	0/1:37:21,16:21:748:16:572:-40.6753,0,-56.5072	0/1:30:13,17:13:468:17:608:-46.0211,0,-33.4287	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:190:190,0:190:6749:0:0:0,-57.1957,-607.484	0/0:283:283,0:283:10076:0:0:0,-85.1915,-906.777	0/1:115:38,77:38:1337:77:2733:-211.594,0,-86.0095	0/1:119:46,72:46:1633:72:2575:-196.118,0,-111.376	0/0:59:59,0:59:2097:0:0:0,-17.7608,-188.998	0/1:187:93,94:93:3314:94:3345:-244.975,0,-242.177	0/0:182:181,1:181:6483:1:36:0,-51.1892,-579.956	0/1:427:216,210:216:7727:210:7501:-546.533,0,-566.864	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:270:144,126:144:5141:126:4504:-324.25,0,-381.553	0/1:123:52,71:52:1841:71:2535:-191.374,0,-128.942	0/1:105:66,39:66:2349:39:1392:-93.9709,0,-180.059	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:33:33,0:33:1172:0:0:0,-9.93399,-105.787	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:27:27,0:27:959:0:0:0,-8.12781,-86.6254	0/1:59:31,28:31:1085:28:993:-71.9226,0,-80.1962	0/1:218:118,100:118:4225:100:3580:-256.783,0,-314.804	0/0:136:136,0:136:4841:0:0:0,-40.9401,-435.845	0/0:71:71,0:71:2532:0:0:0,-21.3731,-228.132	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:112:64,48:64:2283:48:1706:-120.11,0,-172.016	0/1:31:14,17:14:489:17:612:-46.0815,0,-35.007	0/0:203:203,0:203:7262:0:0:0,-61.1091,-653.632	0/0:71:71,0:71:2527:0:0:0,-21.3731,-227.682	0/0:50:50,0:50:1779:0:0:0,-15.0515,-160.392	0/0:177:177,0:177:6280:0:0:0,-53.2823,-565.296	0/0:135:135,0:135:4794:0:0:0,-40.639,-431.617	0/0:139:139,0:139:4976:0:0:0,-41.8432,-447.989	0/1:77:35,42:35:1248:42:1502:-112.295,0,-89.4456	0/1:155:76,79:76:2704:79:2816:-207.021,0,-196.943	0/1:154:74,79:74:2652:79:2832:-208.701,0,-192.509	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:176:176,0:176:6292:0:0:0,-52.9813,-566.374	0/1:49:23,26:23:824:26:936:-69.809,0,-59.7328	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:120:43,77:43:1510:77:2735:-210.269,0,-100.066	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/0:29:28,1:28:999:1:36:0,-5.13159,-86.6262	0/1:106:65,41:65:2328:41:1468:-100.507,0,-177.871	0/0:140:137,3:137:4874:3:108:0,-32.069,-428.737	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:132:61,71:61:2170:71:2543:-189.384,0,-155.829	0/0:252:252,0:252:8990:0:0:0,-75.8596,-809.08	0/1:72:29,43:29:1036:43:1548:-117.939,0,-71.8798	0/0:59:59,0:59:2089:0:0:0,-17.7608,-188.278	0/1:135:62,73:62:2203:73:2620:-195.408,0,-157.896	0/1:237:80,157:80:2868:157:5607:-433.407,0,-187.013	0/1:84:45,39:45:1604:39:1395:-100.562,0,-119.364	0/1:66:22,44:22:788:44:1584:-122.984,0,-51.3768	0/1:60:32,28:32:1148:28:995:-71.8022,0,-85.568	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/1:145:67,78:67:2385:78:2785:-207.24,0,-171.257	0/1:93:46,47:46:1640:47:1688:-124.211,0,-119.893	0/0:264:264,0:264:9429:0:0:0,-79.4719,-848.57	0/1:145:57,88:57:2033:88:3160:-240.975,0,-139.591	0/1:185:87,97:87:3096:97:3459:-255.771,0,-223.117	0/0:100:100,0:100:3575:0:0:0,-30.103,-321.957	0/0:23:23,0:23:819:0:0:0,-6.92369,-74.0316	0/0:125:125,0:125:4480:0:0:0,-37.6287,-403.369	0/0:119:119,0:119:4268:0:0:0,-35.8226,-384.297	0/0:161:161,0:161:5749:0:0:0,-48.4658,-517.526	0/1:54:26,28:26:928:28:1004:-74.4202,0,-67.5826	0/1:67:31,36:31:1108:36:1275:-94.8833,0,-79.862	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/1:196:104,92:104:3728:92:3300:-238.217,0,-276.719	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/1:82:48,34:48:1711:34:1220:-85.4223,0,-129.591	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03	0/1:68:31,37:31:1099:37:1328:-99.3522,0,-78.7494	0/1:190:104,85:104:3727:85:3043:-216.845,0,-278.375	0/1:100:34,66:34:1224:66:2372:-183.635,0,-80.364	0/0:86:85,1:85:2984:1:36:0,-22.2903,-265.193	0/0:102:100,2:100:3584:2:72:0,-23.8683,-315.93
chr07	278153	.	C	T	47089.3	PASS	AB=0.523487;ABP=22.7986;AC=48;AF=0.255319;AN=188;AO=2167;CIGAR=1X;DP=7326;DPB=7326;DPRA=1.26281;EPP=905.47;EPPR=1818.78;GTI=0;LEN=1;MEANALT=1;MQM=52.0512;MQMR=53.1115;NS=94;NUMALT=1;ODDS=4.01038;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76822;QR=181809;RO=5159;RPL=2167;RPP=4708.59;RPPR=11205.6;RPR=0;RUN=1;SAF=1558;SAP=905.47;SAR=609;SRF=3618;SRP=1818.78;SRR=1541;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:29:16,13:16:572:13:468:-33.4344,0,-42.9584	0/1:30:16,14:16:572:14:491:-35.2045,0,-42.6611	0/1:48:18,30:18:644:30:1048:-79.537,0,-43.5906	0/1:63:33,30:33:1117:30:1042:-75.0027,0,-81.6306	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.7753	0/0:23:23,0:23:824:0:0:0,-6.92369,-73.8685	0/1:39:15,24:15:531:24:845:-64.5165,0,-36.1703	0/0:38:38,0:38:1341:0:0:0,-11.4391,-120.556	0/0:36:36,0:36:1288:0:0:0,-10.8371,-114.573	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.6618	0/0:292:292,0:292:10273:0:0:0,-87.9008,-920.992	0/1:125:61,64:61:2117:64:2279:-166.509,0,-152.489	0/1:58:31,27:31:1099:27:959:-68.9514,0,-81.3143	0/1:76:40,36:40:1416:36:1288:-92.4216,0,-104.66	0/0:66:66,0:66:2364:0:0:0,-19.868,-212.634	0/1:70:30,40:30:1057:40:1419:-106.362,0,-74.2042	0/1:60:29,31:29:1027:31:1104:-81.3426,0,-74.4618	0/1:21:14,7:14:500:7:252:-16.6494,0,-38.7875	0/0:130:130,0:130:4549:0:0:0,-39.1339,-406.39	0/0:53:53,0:53:1873:0:0:0,-15.9546,-168.747	0/0:60:60,0:60:2114:0:0:0,-18.0618,-190.345	0/1:15:7,8:7:248:8:288:-21.0262,0,-18.1363	0/1:29:10,19:10:345:19:676:-52.2196,0,-22.6172	0/0:35:35,0:35:1241:0:0:0,-10.536,-111.821	0/1:28:14,14:14:504:14:495:-36.3263,0,-37.229	0/0:66:66,0:66:2324:0:0:0,-19.868,-209.201	0/1:74:30,44:30:1067:44:1559:-117.787,0,-73.7356	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.2481	0/1:77:44,33:44:1556:33:1184:-83.5517,0,-116.915	0/1:18:10,8:10:360:8:279:-19.9645,0,-27.2506	0/1:31:13,18:13:464:18:639:-48.417,0,-32.6226	0/0:82:81,1:81:2855:1:36:0,-21.3383,-252.792	0/0:92:92,0:92:3231:0:0:0,-27.6948,-288.239	0/0:178:178,0:178:6270:0:0:0,-53.5833,-559.904	0/0:78:78,0:78:2736:0:0:0,-23.4803,-244.921	0/1:199:83,116:83:2923:116:4098:-307.505,0,-201.283	0/1:151:73,78:73:2600:78:2796:-206.228,0,-188.563	0/0:13:13,0:13:455:0:0:0,-3.91339,-40.9558	0/0:231:231,0:231:8085:0:0:0,-69.5379,-721.236	0/1:102:47,55:47:1638:55:1945:-143.872,0,-116.139	0/1:42:21,21:21:730:21:756:-55.2442,0,-53.2832	0/1:120:61,59:61:2134:59:2103:-152.316,0,-154.7	0/0:47:47,0:47:1659:0:0:0,-14.1484,-149.185	0/0:67:67,0:67:2378:0:0:0,-20.169,-213.681	0/0:57:57,0:57:1991:0:0:0,-17.1587,-179.105	0/0:49:49,0:49:1752:0:0:0,-14.7505,-157.899	0/0:19:19,0:19:672:0:0:0,-5.71957,-60.7033	0/0:51:51,0:51:1815:0:0:0,-15.3525,-162.937	0/1:26:10,16:10:343:16:576:-43.9316,0,-23.3555	0/1:45:14,31:14:500:31:1093:-84.9077,0,-31.7471	0/1:64:33,31:33:1184:31:1103:-79.9296,0,-87.5088	0/0:109:108,1:108:3802:1:36:0,-29.3887,-337.032	0/0:32:32,0:32:1120:0:0:0,-9.63296,-100.771	0/1:28:18,10:18:625:10:360:-24.2345,0,-48.1146	0/0:47:47,0:47:1593:0:0:0,-14.1484,-142.713	0/1:39:18,21:18:648:21:728:-53.7151,0,-46.6086	0/1:22:13,9:13:447:9:309:-21.4697,0,-33.9055	0/1:156:72,84:72:2537:84:2980:-220.899,0,-180.847	0/0:53:53,0:53:1857:0:0:0,-15.9546,-167.072	0/1:35:11,24:11:396:24:852:-66.1565,0,-25.3493	0/0:100:99,1:99:3501:1:36:0,-26.5116,-311.049	0/0:71:71,0:71:2498:0:0:0,-21.3731,-224.161	0/1:62:26,36:26:924:36:1296:-98.1254,0,-64.8134	0/0:49:49,0:49:1740:0:0:0,-14.7505,-156.627	0/1:24:10,14:10:360:14:500:-37.5159,0,-25.472	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.662	0/1:60:22,38:22:784:38:1351:-103.67,0,-51.5206	0/1:45:19,26:19:676:26:924:-69.6557,0,-47.3076	0/1:443:233,210:233:8169:210:7415:-527.328,0,-597.035	0/1:23:10,13:10:336:13:449:-33.7199,0,-23.5879	0/1:65:33,32:33:1188:32:1140:-83.1637,0,-87.6096	0/0:124:124,0:124:4366:0:0:0,-37.3277,-390.799	0/1:14:12,2:12:432:2:63:-1.75905,0,-34.9185	0/1:29:13,16:13:464:16:576:-43.3139,0,-33.2684	0/0:83:83,0:83:2904:0:0:0,-24.9855,-260.519	0/1:40:17,23:17:612:23:828:-62.6479,0,-43.3365	0/1:44:14,30:14:504:30:1068:-82.7373,0,-32.2935	0/0:25:25,0:25:881:0:0:0,-7.52575,-79.4214	0/0:94:94,0:94:3339:0:0:0,-28.2968,-297.366	0/0:23:23,0:23:815:0:0:0,-6.92369,-73.1413	0/0:26:26,0:26:909:0:0:0,-7.82678,-81.7627	0/0:57:56,1:56:2004:1:28:0,-14.4225,-177.566	0/1:53:35,18:35:1237:18:644:-42.2361,0,-95.5793	0/1:68:34,34:34:1193:34:1212:-88.5412,0,-86.8387	0/0:56:56,0:56:1986:0:0:0,-16.8577,-177.897	0/1:122:70,52:70:2487:52:1836:-128.257,0,-186.961	0/0:22:22,0:22:773:0:0:0,-6.62266,-69.7031	0/0:92:92,0:92:3260:0:0:0,-27.6948,-292.278	0/0:79:79,0:79:2824:0:0:0,-23.7814,-253.349	0/1:360:161,199:161:5655:199:7069:-523.53,0,-397.282	0/1:676:327,349:327:11402:349:12310:-897.415,0,-816.085	0/1:82:27,55:27:936:55:1964:-150.901,0,-59.7713	0/0:65:64,1:64:2285:1:27:0,-16.868,-203.194	0/0:115:115,0:115:4038:0:0:0,-34.6184,-362.832
chr07	359211	.	G	T	369282	PASS	AB=0.48628;ABP=21.66;AC=140;AF=0.744681;AN=188;AO=14157;CIGAR=1X;DP=20046;DPB=20046;DPRA=0;EPP=30744.5;EPPR=12764.8;GTI=2;LEN=1;MEANALT=1.11702;MQM=51.4572;MQMR=52.2474;NS=94;NUMALT=1;ODDS=4.86625;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=503743;QR=207555;RO=5877;RPL=7082;RPP=3.01782;RPPR=99.491;RPR=7075;RUN=1;SAF=7082;SAP=3.01782;SAR=7075;SRF=2683;SRP=99.491;SRR=3194;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:142:72,70:72:2550:70:2490:-177.466,0,-185.387	0/1:267:142,125:142:5011:125:4450:-316.316,0,-367.891	0/1:252:130,122:130:4586:122:4328:-310.346,0,-334.875	0/1:500:241,259:241:8542:259:9203:-660.625,0,-611.236	1/1:174:6,167:6:216:167:5938:-503.957,-32.6409,0	1/1:68:0,68:0:0:68:2411:-214.296,-20.47,0	0/1:312:173,138:173:6120:138:4925:-342.927,0,-453.007	1/1:352:0,351:0:0:351:12499:-1111.72,-105.662,0	1/1:268:0,268:0:0:268:9462:-841.6,-80.676,0	1/1:154:4,150:4:140:150:5344:-461.532,-33.414,0	1/1:155:0,155:0:0:155:5532:-491.298,-46.6597,0	0/1:197:87,110:87:3075:110:3923:-288.573,0,-215.407	0/1:166:83,83:83:2933:83:2975:-215.035,0,-212.659	0/1:237:111,126:111:3896:126:4462:-326.111,0,-277.66	1/1:163:0,163:0:0:163:5823:-515.209,-49.0679,0	0/1:136:66,70:66:2329:70:2485:-180.285,0,-167.607	0/1:176:86,90:86:3030:90:3187:-233.065,0,-218.649	0/1:155:84,71:84:2974:71:2534:-180.613,0,-219.171	1/1:101:0,101:0:0:101:3587:-321.387,-30.404,0	1/1:308:0,308:0:0:308:10966:-974.818,-92.7172,0	1/1:237:0,237:0:0:237:8436:-748.674,-71.3441,0	0/1:249:179,70:179:6267:70:2486:-146.761,0,-485.911	0/1:234:102,132:102:3622:132:4690:-344.542,0,-253.571	1/1:215:1,214:1:36:214:7633:-676.083,-61.1729,0	0/1:216:94,121:94:3344:121:4324:-318.091,0,-234.138	1/1:723:1,722:1:36:722:25613:-2285.68,-214.071,0	0/1:609:280,329:280:9974:329:11726:-852.603,0,-707.439	1/1:81:0,81:0:0:81:2851:-252.894,-24.3834,0	0/1:444:229,215:229:8083:215:7656:-548.118,0,-589.244	0/1:285:145,140:145:5157:140:4991:-358.011,0,-373.483	0/1:227:126,101:126:4439:101:3574:-248.433,0,-325.492	1/1:24:0,24:0:0:24:844:-75.3402,-7.22472,0	1/1:55:0,55:0:0:55:1960:-174.768,-16.5567,0	1/1:27:0,27:0:0:27:960:-85.5945,-8.12781,0	1/1:11:0,11:0:0:11:388:-34.8766,-3.31133,0	0/1:66:21,45:21:748:45:1593:-120.841,0,-47.4056	0/1:439:223,215:223:7863:215:7672:-552.355,0,-572.611	1/1:243:0,243:0:0:243:8620:-766.929,-73.1503,0	1/1:139:0,139:0:0:139:4930:-440.354,-41.8432,0	0/1:6:4,2:4:136:2:72:-4.91884,0,-10.3777	0/1:323:174,149:174:6124:149:5284:-372.6,0,-447.541	0/1:83:48,35:48:1707:35:1240:-85.3156,0,-128.233	1/1:346:0,346:0:0:346:12320:-1094.14,-104.156,0	1/1:167:1,166:1:36:166:5906:-522.674,-46.6737,0	1/1:155:0,155:0:0:155:5535:-492.534,-46.6597,0	1/1:225:0,225:0:0:225:7974:-707.102,-67.7318,0	1/1:189:1,188:1:36:188:6703:-591.722,-53.2964,0	1/1:235:1,234:1:36:234:8354:-735.257,-67.1935,0	0/1:191:84,107:84:2956:107:3817:-280.519,0,-206.474	0/1:280:150,130:150:5347:130:4652:-327.781,0,-393.921	0/1:372:196,175:196:6944:175:6222:-442.44,0,-508.448	1/1:29:0,29:0:0:29:1031:-91.7256,-8.72987,0	1/1:254:1,252:1:36:252:8993:-795.59,-72.8422,0	0/1:123:51,71:51:1786:71:2523:-187.647,0,-123.362	1/1:29:0,29:0:0:29:1017:-90.1495,-8.72987,0	0/1:281:136,145:136:4785:145:5139:-370.115,0,-342.563	0/1:143:68,75:68:2415:75:2674:-194.528,0,-172.435	0/1:43:14,29:14:478:29:1036:-79.4902,0,-30.2843	1/1:32:0,32:0:0:32:1130:-101.378,-9.63296,0	0/1:199:105,94:105:3662:94:3313:-234.193,0,-266.985	1/1:256:1,255:1:36:255:9082:-804.33,-73.4654,0	1/1:22:0,22:0:0:22:788:-69.9112,-6.62266,0	0/1:335:178,157:178:6226:157:5582:-398.98,0,-456.836	1/1:507:1,506:1:32:506:17986:-1597.97,-149.443,0	0/1:193:109,84:109:3865:84:2995:-208.335,0,-287.51	1/1:165:0,164:0:0:164:5851:-518.946,-49.3689,0	0/1:376:146,230:146:5146:230:8163:-612.429,0,-346.311	0/1:305:211,94:211:7437:94:3317:-201.925,0,-571.919	0/1:89:43,46:43:1522:46:1627:-118.386,0,-110.006	0/1:224:151,73:151:5297:73:2604:-162.742,0,-406.064	0/1:171:93,78:93:3267:78:2785:-198.522,0,-240.362	1/1:53:0,53:0:0:53:1889:-168.18,-15.9546,0	0/1:284:145,139:145:5151:139:4958:-354.374,0,-376.276	0/1:187:92,95:92:3273:95:3400:-246.426,0,-237.217	1/1:366:0,366:0:0:366:13047:-1158.11,-110.177,0	0/1:323:179,144:179:6317:144:5124:-356.953,0,-466.075	0/1:247:102,145:102:3613:145:5173:-386.604,0,-249.921	1/1:181:1,180:1:36:180:6404:-566.154,-50.8882,0	1/1:11:0,11:0:0:11:392:-35.5203,-3.31133,0	1/1:244:1,241:1:36:241:8596:-759.81,-69.6082,0	1/1:256:0,256:0:0:256:9088:-807.092,-77.0637,0	1/1:478:0,477:0:0:477:16996:-1508.53,-143.591,0	0/1:217:122,95:122:4317:95:3396:-238.369,0,-320.174	0/1:177:75,102:75:2640:102:3642:-270.247,0,-183.269	1/1:191:0,191:0:0:191:6803:-607.652,-57.4967,0	0/1:321:162,159:162:5723:159:5669:-408.523,0,-412.681	1/1:68:0,68:0:0:68:2389:-214.395,-20.47,0	1/1:162:0,162:0:0:162:5769:-515.231,-48.7669,0	1/1:164:0,164:0:0:164:5847:-520.837,-49.3689,0	0/1:153:84,69:84:2961:69:2476:-175.523,0,-219.635	0/1:258:139,119:139:4887:119:4243:-301.526,0,-360.199	0/1:194:120,74:120:4246:74:2627:-175.316,0,-321.971	1/1:127:1,126:1:36:126:4503:-397.989,-34.6823,0	1/1:22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chr07	730761	.	TT	TC	111224	PASS	AB=0.48013;ABP=19.8373;AC=138;AF=0.734043;AN=188;AO=5590;CIGAR=1M1X;DP=8162;DPB=8162;DPRA=0;EPP=12124.2;EPPR=5533.75;GTI=2;LEN=1;MEANALT=1.2234;MQM=59.9998;MQMR=59.9961;NS=94;NUMALT=1;ODDS=1.20618;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=196905;QR=87968;RO=2547;RPL=2;RPP=12124.2;RPPR=5533.75;RPR=5588;RUN=1;SAF=0;SAP=12141.5;SAR=5590;SRF=0;SRP=5533.75;SRR=2547;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:81:53,28:53:1850:28:1000:-65.9319,0,-142.393	0/1:44:14,30:14:434:30:1050:-81.5635,0,-26.1126	0/1:121:64,57:64:2223:57:1994:-143.306,0,-163.906	0/1:141:68,73:68:2319:73:2615:-193.152,0,-166.521	1/1:48:0,48:0:0:48:1695:-152.835,-14.4494,0	1/1:49:0,49:0:0:49:1728:-155.802,-14.7505,0	0/1:92:64,27:64:2223:27:957:-58.7964,0,-172.686	1/1:76:0,76:0:0:76:2696:-242.884,-22.8783,0	1/1:109:0,109:0:0:109:3843:-346.066,-32.8123,0	1/1:45:0,45:0:0:45:1548:-139.605,-13.5464,0	1/1:76:0,75:0:0:75:2620:-235.689,-22.5773,0	0/1:107:54,52:54:1888:52:1824:-132.277,0,-138.035	0/1:86:41,45:41:1420:45:1570:-115.698,0,-102.203	0/1:90:44,46:44:1483:46:1565:-114.042,0,-106.661	1/1:74:0,74:0:0:74:2570:-231.548,-22.2762,0	0/1:63:35,27:35:1204:27:942:-66.0883,0,-89.6558	0/1:50:28,22:28:944:22:784:-55.8324,0,-70.2136	0/1:28:14,14:14:497:14:484:-35.4597,0,-36.6359	1/1:47:0,47:0:0:47:1680:-151.487,-14.1484,0	1/1:118:0,117:0:0:117:4187:-376.651,-35.2205,0	1/1:129:0,129:0:0:129:4587:-412.998,-38.8329,0	0/1:122:87,35:87:2981:35:1247:-75.8084,0,-231.797	0/1:108:47,60:47:1608:60:2129:-159.415,0,-112.54	1/1:80:0,80:0:0:80:2826:-254.579,-24.0824,0	0/1:103:60,43:60:2055:43:1512:-105.365,0,-154.209	1/1:212:0,212:0:0:212:7470:-672.349,-63.8184,0	0/1:204:94,110:94:3317:110:3912:-290.865,0,-237.34	1/1:31:0,31:0:0:31:1070:-96.6046,-9.33193,0	0/1:185:54,128:54:1887:128:4510:-351.026,0,-115.061	0/1:136:61,75:61:2122:75:2633:-196.277,0,-150.304	1/1:96:0,95:0:0:95:3356:-301.915,-28.5979,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	1/1:41:0,41:0:0:41:1453:-131.064,-12.3422,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:18:0,18:0:0:18:631:-57.1157,-5.41854,0	0/1:27:18,9:18:646:9:311:-20.1959,0,-50.3435	0/1:221:114,106:114:3984:106:3711:-267.717,0,-292.275	0/1:138:57,81:57:2009:81:2870:-216.996,0,-139.54	1/1:60:0,60:0:0:60:2095:-188.818,-18.0618,0	0/1:11:5,6:5:180:6:208:-15.7478,0,-13.2407	0/1:76:45,31:45:1587:31:1103:-76.7015,0,-120.238	0/1:32:16,16:16:570:16:563:-41.3662,0,-42	0/1:155:72,83:72:2473:83:2912:-215.654,0,-176.161	0/1:58:26,32:26:891:32:1070:-79.1397,0,-63.0398	1/1:57:2,55:2:72:55:1885:-163.088,-10.322,0	1/1:120:0,120:0:0:120:4235:-381.331,-36.1236,0	1/1:110:1,109:1:36:109:3829:-341.209,-29.515,0	1/1:157:0,156:0:0:156:5531:-497.668,-46.9607,0	0/1:107:44,63:44:1546:63:2220:-167.853,0,-107.219	0/1:91:54,37:54:1835:37:1295:-89.4566,0,-138.028	0/1:136:78,58:78:2724:58:2034:-142.389,0,-204.461	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:122:0,120:0:0:120:4224:-380.044,-36.1236,0	0/1:40:23,17:23:797:17:612:-43.3722,0,-60.0041	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	0/1:128:53,74:53:1853:74:2640:-199.355,0,-128.555	0/1:64:40,24:40:1368:24:864:-58.8166,0,-104.145	0/1:20:9,11:9:313:11:396:-29.9621,0,-22.4845	1/1:26:0,23:0:0:23:813:-73.1624,-6.92369,0	0/1:107:53,53:53:1840:53:1868:-136.13,0,-133.608	1/1:138:1,137:1:25:137:4786:-428.406,-39.0423,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:117:52,65:52:1766:65:2317:-173.568,0,-123.994	1/1:123:0,122:0:0:122:4314:-388.078,-36.7257,0	0/1:84:59,25:59:1996:25:883:-54.5009,0,-154.617	1/1:60:0,60:0:0:60:2109:-190.078,-18.0618,0	0/1:125:63,62:63:2081:62:2182:-159.018,0,-149.921	0/1:144:108,35:108:3724:35:1222:-66.8752,0,-291.956	0/1:44:25,19:25:822:19:668:-47.2003,0,-61.037	0/1:49:29,20:29:1029:20:701:-48.6613,0,-78.1717	0/1:44:27,17:27:926:17:599:-40.9928,0,-70.4037	1/1:32:2,30:2:70:30:1045:-87.7102,-2.98563,0	0/1:177:95,82:95:3265:82:2894:-207.412,0,-240.786	0/1:86:41,45:41:1430:45:1597:-118.13,0,-103.105	1/1:122:0,121:0:0:121:4281:-385.181,-36.4246,0	0/1:129:57,72:57:1986:72:2543:-190.286,0,-140.178	0/1:95:59,36:59:2016:36:1264:-85.4626,0,-153.108	1/1:71:0,71:0:0:71:2520:-227.05,-21.3731,0	1/1:27:0,27:0:0:27:938:-84.7318,-8.12781,0	1/1:77:0,77:0:0:77:2756:-248.281,-23.1793,0	1/1:55:1,54:1:25:54:1893:-168.146,-14.0568,0	1/1:160:0,160:0:0:160:5697:-512.85,-48.1648,0	0/1:68:37,31:37:1306:31:1079:-76.9476,0,-97.3661	0/1:83:41,41:41:1447:41:1436:-104.599,0,-105.588	1/1:44:0,44:0:0:44:1516:-136.726,-13.2453,0	0/1:157:68,89:68:2377:89:3095:-231.519,0,-166.925	1/1:18:0,18:0:0:18:635:-57.477,-5.41854,0	1/1:102:0,102:0:0:102:3544:-319.171,-30.7051,0	1/1:89:1,88:1:36:88:3093:-275.002,-23.1934,0	0/1:70:30,40:30:1038:40:1411:-106.214,0,-72.6542	0/1:178:102,75:102:3472:75:2597:-180.338,0,-259.051	0/1:85:56,29:56:1927:29:1036:-67.9664,0,-148.116	1/1:81:1,80:1:25:80:2822:-251.721,-21.8836,0	1/1:92:0,91:0:0:91:3211:-288.962,-27.3937,0
chr07	943504	.	C	A	141872	PASS	AB=0.52919;ABP=42.3095;AC=139;AF=0.739362;AN=188;AO=6819;CIGAR=1X;DP=9329;DPB=9329;DPRA=0;EPP=14706.2;EPPR=5410.03;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9661;MQMR=60;NS=94;NUMALT=1;ODDS=3.39622;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243825;QR=89024;RO=2506;RPL=12;RPP=14706.2;RPPR=5410.03;RPR=6807;RUN=1;SAF=6819;SAP=14810.3;SAR=0;SRF=2506;SRP=5444.72;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:25,32:25:887:32:1152:-86.8314,0,-62.9894	0/1:86:41,45:41:1433:45:1616:-119.841,0,-103.375	0/1:187:75,112:75:2667:112:4001:-303.984,0,-183.983	0/1:190:83,107:83:2952:107:3803:-285.271,0,-208.719	1/1:57:0,57:0:0:57:2028:-182.79,-17.1587,0	1/1:31:0,31:0:0:31:1104:-99.6706,-9.33193,0	0/1:90:37,53:37:1324:53:1908:-144.905,0,-92.3694	1/1:171:0,171:0:0:171:6108:-549.806,-51.4761,0	1/1:81:1,80:1:36:80:2830:-251.339,-20.7852,0	1/1:75:1,74:1:36:74:2637:-233.977,-18.979,0	1/1:75:0,75:0:0:75:2688:-242.165,-22.5773,0	0/1:95:48,46:48:1708:46:1648:-119.952,0,-125.349	0/1:119:69,49:69:2442:49:1756:-122.442,0,-184.154	0/1:95:39,56:39:1388:56:2016:-153.115,0,-96.6211	1/1:75:0,75:0:0:75:2696:-242.884,-22.5773,0	0/1:69:37,32:37:1312:32:1152:-83.2191,0,-97.6106	0/1:34:20,14:20:716:14:500:-35.1012,0,-54.5327	0/1:53:30,23:30:1072:23:828:-58.8895,0,-80.8379	1/1:39:0,39:0:0:39:1404:-126.659,-11.7402,0	1/1:120:0,120:0:0:120:4277:-385.106,-36.1236,0	1/1:196:0,196:0:0:196:7015:-631.407,-59.0019,0	0/1:154:95,59:95:3379:59:2112:-143.987,0,-257.968	0/1:97:49,48:49:1735:48:1720:-125.886,0,-127.234	1/1:57:0,57:0:0:57:2048:-184.592,-17.1587,0	0/1:81:39,42:39:1392:42:1489:-109.92,0,-101.196	1/1:220:1,219:1:36:219:7837:-701.753,-62.6283,0	1/1:278:1,277:1:36:277:9852:-882.978,-80.0881,0	1/1:30:0,30:0:0:30:1072:-96.7925,-9.0309,0	0/1:272:108,164:108:3848:164:5864:-445.989,0,-264.638	0/1:157:84,73:84:2970:73:2608:-187.706,0,-220.272	1/1:98:0,98:0:0:98:3496:-314.847,-29.5009,0	1/1:30:0,30:0:0:30:1065:-96.1606,-9.0309,0	1/1:74:0,74:0:0:74:2614:-235.505,-22.2762,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	0/1:49:22,27:22:788:27:957:-71.6934,0,-56.4943	0/1:187:83,104:83:2947:104:3726:-279.247,0,-209.172	0/1:141:71,70:71:2534:70:2512:-183.887,0,-185.865	1/1:79:0,79:0:0:79:2832:-255.118,-23.7814,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/1:90:37,53:37:1324:53:1888:-143.106,0,-92.3694	0/1:36:17,19:17:612:19:684:-51.0532,0,-44.5764	0/1:224:82,142:82:2932:142:5063:-388.382,0,-196.684	0/1:50:19,31:19:667:31:1108:-84.9789,0,-45.3031	1/1:46:0,46:0:0:46:1636:-147.523,-13.8474,0	1/1:114:0,114:0:0:114:4090:-368.227,-34.3174,0	1/1:107:0,107:0:0:107:3840:-345.795,-32.2102,0	1/1:220:0,220:0:0:220:7861:-707.517,-66.2266,0	0/1:107:55,52:55:1968:52:1844:-134.028,0,-145.185	0/1:159:72,87:72:2560:87:3124:-233.522,0,-182.787	0/1:134:41,93:41:1423:93:3336:-260.118,0,-88.0239	1/1:15:0,15:0:0:15:521:-47.2163,-4.51545,0	1/1:127:1,126:1:36:126:4528:-404.087,-34.6325,0	0/1:74:49,25:49:1722:25:900:-59.0448,0,-132.987	0/1:30:16,14:16:572:14:504:-36.6672,0,-42.7825	0/1:172:78,94:78:2788:94:3356:-250.478,0,-199.384	0/1:37:12,25:12:423:25:881:-68.4678,0,-27.267	0/1:22:10,12:10:356:12:432:-32.5985,0,-25.7586	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:96:1,95:1:32:95:3397:-302.707,-25.6996,0	1/1:93:1,92:1:36:92:3312:-294.699,-24.3975,0	1/1:21:0,21:0:0:21:745:-67.3734,-6.32163,0	0/1:174:80,94:80:2846:94:3355:-249.787,0,-203.999	1/1:154:0,154:0:0:154:5494:-494.587,-46.3586,0	0/1:88:38,50:38:1359:50:1800:-135.792,0,-96.1192	1/1:78:0,78:0:0:78:2793:-251.608,-23.4803,0	0/1:89:38,51:38:1364:51:1836:-138.729,0,-96.269	0/1:202:141,61:141:5005:61:2177:-135.365,0,-389.792	0/1:63:37,26:37:1303:26:932:-65.234,0,-98.6057	0/1:68:32,36:32:1132:36:1296:-96.4739,0,-81.7185	0/1:50:26,24:26:928:24:860:-62.6703,0,-68.7868	1/1:36:0,36:0:0:36:1287:-116.133,-10.8371,0	0/1:185:73,112:73:2608:112:4002:-304.673,0,-179.278	0/1:101:39,62:39:1369:62:2232:-170.74,0,-93.1022	1/1:124:0,124:0:0:124:4422:-398.15,-37.3277,0	0/1:199:78,121:78:2766:121:4340:-330.869,0,-189.277	0/1:162:81,81:81:2887:81:2893:-211.838,0,-211.3	1/1:125:0,125:0:0:125:4449:-400.56,-37.6288,0	1/1:34:0,34:0:0:34:1210:-109.204,-10.235,0	1/1:96:0,96:0:0:96:3399:-306.122,-28.8989,0	1/1:131:0,131:0:0:131:4673:-420.731,-39.4349,0	1/1:168:0,168:0:0:168:5997:-539.836,-50.573,0	0/1:44:23,21:23:802:21:756:-55.1219,0,-59.2521	0/1:86:44,42:44:1554:42:1512:-110.486,0,-114.262	1/1:54:1,53:1:36:53:1900:-167.676,-12.6573,0	0/1:126:63,63:63:2221:63:2264:-166.093,0,-162.224	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	1/1:65:1,64:1:36:64:2293:-203.033,-15.9687,0	1/1:66:0,65:0:0:65:2340:-210.499,-19.567,0	0/1:93:42,50:42:1500:50:1796:-133.868,0,-107.24	0/1:165:78,87:78:2760:87:3124:-231.716,0,-198.971	0/1:63:40,23:40:1423:23:824:-55.5184,0,-109.402	1/1:65:0,65:0:0:65:2336:-210.499,-19.567,0	1/1:111:0,111:0:0:111:3992:-359.468,-33.4143,0
chr07	1050178	.	G	T	60457.5	PASS	AB=0.51092;ABP=10.1242;AC=51;AF=0.271277;AN=188;AO=3517;CIGAR=1X;DP=12303;DPB=12303;DPRA=1.23009;EPP=7570.75;EPPR=18800.3;GTI=0;LEN=1;MEANALT=1.03571;MQM=59.9613;MQMR=59.981;NS=94;NUMALT=1;ODDS=3.67115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=125833;QR=314163;RO=8784;RPL=8;RPP=7570.75;RPPR=18800.3;RPR=3509;RUN=1;SAF=3517;SAP=7640.08;SAR=0;SRF=8784;SRP=19077.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:10,13:10:360:13:468:-35.536,0,-25.8206	0/1:200:87,113:87:3101:113:4053:-304.747,0,-219.107	0/1:124:58,66:58:2080:66:2344:-173.89,0,-150.143	0/1:370:183,187:183:6552:187:6682:-490.07,0,-478.381	0/0:44:43,1:43:1540:1:36:0,-9.64704,-135.295	0/0:114:114,0:114:4087:0:0:0,-34.3174,-368.015	0/1:187:89,98:89:3180:98:3513:-260.087,0,-230.132	0/0:249:249,0:249:8924:0:0:0,-74.9565,-803.127	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.318	0/1:210:86,124:86:3076:124:4443:-336.817,0,-213.852	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.503	0/1:84:44,40:44:1580:40:1440:-104.611,0,-117.205	0/1:73:30,43:30:1080:43:1548:-117.638,0,-75.5381	0/1:148:78,69:78:2800:69:2458:-176.862,0,-207.626	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.553	0/1:58:27,31:27:968:31:1116:-83.292,0,-69.9776	0/1:108:64,44:64:2277:44:1566:-108.719,0,-172.679	0/1:96:53,43:53:1891:43:1548:-110.714,0,-141.569	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:206:204,2:204:7305:2:72:0,-55.1755,-650.662	0/0:214:214,0:214:7646:0:0:0,-64.4204,-688.17	0/1:78:35,43:35:1260:43:1531:-114.602,0,-90.2251	0/1:36:20,16:20:720:16:576:-41.3379,0,-54.2917	0/1:187:87,100:87:3086:100:3589:-266.923,0,-221.674	0/1:79:35,44:35:1256:44:1575:-118.259,0,-89.5639	0/0:456:454,2:454:16276:2:72:0,-130.599,-1457.83	0/0:296:296,0:296:10519:0:0:0,-89.1049,-946.626	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:488:247,241:247:8816:241:8629:-629.594,0,-646.524	0/1:230:118,112:118:4228:112:4012:-292.032,0,-311.463	0/0:182:182,0:182:6525:0:0:0,-54.7875,-587.33	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5384	0/1:169:91,78:91:3272:78:2808:-202.085,0,-243.825	0/1:234:126,108:126:4492:108:3869:-277.961,0,-334.007	0/1:96:62,34:62:2215:34:1224:-81.5682,0,-170.715	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:252:103,149:103:3681:149:5327:-403.703,0,-255.632	0/1:30:21,9:21:741:9:324:-20.475,0,-57.2775	0/1:191:86,105:86:3075:105:3761:-281.188,0,-219.481	0/1:64:27,37:27:972:37:1332:-100.916,0,-68.532	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/0:68:68,0:68:2427:0:0:0,-20.47,-218.685	0/0:141:141,0:141:5060:0:0:0,-42.4452,-455.544	0/0:259:259,0:259:9285:0:0:0,-77.9668,-835.613	0/1:164:78,86:78:2773:86:3071:-227.25,0,-200.44	0/1:314:122,192:122:4359:192:6829:-520.156,0,-297.961	0/1:199:90,108:90:3224:108:3854:-287.085,0,-230.418	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:169:169,0:169:6046:0:0:0,-50.8741,-544.24	0/1:109:47,62:47:1662:62:2226:-167.791,0,-117.05	0/1:24:9,15:9:324:15:540:-41.7118,0,-22.2811	0/1:181:86,95:86:3025:95:3388:-250.647,0,-217.991	0/1:18:7,11:7:252:11:396:-30.5642,0,-17.6104	0/1:12:6,6:6:216:6:216:-16.1782,0,-16.1782	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:216:216,0:216:7735:0:0:0,-65.0225,-696.18	0/0:142:140,2:140:5000:2:72:0,-35.9095,-443.312	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:245:125,120:125:4464:120:4307:-314.052,0,-328.179	0/0:259:259,0:259:9264:0:0:0,-77.9668,-833.724	0/1:106:59,47:59:2112:47:1688:-120.298,0,-158.44	0/0:137:137,0:137:4898:0:0:0,-41.2411,-440.914	0/1:142:73,69:73:2596:69:2437:-176.835,0,-191.143	0/1:197:65,132:65:2317:132:4713:-365.025,0,-149.486	0/1:43:19,24:19:684:24:850:-63.8739,0,-48.946	0/0:105:105,0:105:3741:0:0:0,-31.6081,-336.89	0/1:127:64,63:64:2288:63:2252:-164.712,0,-167.951	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/1:89:56,33:56:1989:33:1184:-80.0766,0,-152.491	0/1:87:43,44:43:1540:44:1572:-115.581,0,-112.703	0/0:221:221,0:221:7884:0:0:0,-66.5276,-709.561	0/1:244:144,100:144:5156:100:3588:-249.675,0,-390.73	0/1:157:92,65:92:3296:65:2320:-161.798,0,-249.597	0/0:213:212,1:212:7588:1:24:0,-61.7195,-680.402	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:191:191,0:191:6835:0:0:0,-57.4967,-615.22	0/0:150:150,0:150:5368:0:0:0,-45.1545,-483.252	0/0:284:284,0:284:10158:0:0:0,-85.4925,-914.15	0/1:94:51,43:51:1832:43:1548:-111.316,0,-136.864	0/1:66:37,29:37:1320:29:1036:-73.6859,0,-99.234	0/0:116:116,0:116:4160:0:0:0,-34.9195,-374.582	0/1:149:80,69:80:2864:69:2463:-177.07,0,-213.144	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/0:72:72,0:72:2576:0:0:0,-21.6742,-232.09	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.713	0/1:62:31,31:31:1104:31:1116:-82.0878,0,-81.0068	0/1:141:74,67:74:2648:67:2412:-174.891,0,-196.121	0/1:67:24,43:24:860:43:1527:-117.553,0,-57.5528	0/0:146:146,0:146:5209:0:0:0,-43.9504,-468.946	0/0:108:108,0:108:3867:0:0:0,-32.5112,-348.224
chr07	1082112	.	T	C	188241	PASS	AB=0.502026;ABP=3.23909;AC=136;AF=0.723404;AN=188;AO=8962;CIGAR=1X;DP=12171;DPB=12171;DPRA=0;EPP=19290.4;EPPR=6878.16;GTI=2;LEN=1;MEANALT=1.03191;MQM=59.9868;MQMR=60;NS=94;NUMALT=1;ODDS=1.13745;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=320195;QR=114927;RO=3206;RPL=21;RPP=19281.8;RPPR=6886.8;RPR=8941;RUN=1;SAF=1;SAP=19455.1;SAR=8961;SRF=1;SRP=6956.07;SRR=3205;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:56:23,33:23:824:33:1184:-90.0106,0,-57.6256	0/1:191:92,99:92:3308:99:3539:-261.222,0,-240.441	0/1:212:111,101:111:3988:101:3611:-261.376,0,-295.29	0/1:371:194,177:194:6926:177:6301:-455.413,0,-511.723	1/1:129:0,129:0:0:129:4594:-413.624,-38.8329,0	1/1:84:0,84:0:0:84:3000:-270.231,-25.2865,0	0/1:196:88,108:88:3111:108:3842:-286.973,0,-221.212	1/1:234:0,234:0:0:234:8326:-749.347,-70.441,0	1/1:130:0,130:0:0:130:4638:-417.578,-39.1339,0	0/1:131:58,73:58:2084:73:2604:-195.161,0,-148.395	1/1:65:2,63:2:72:63:2243:-195.296,-12.7302,0	0/1:69:43,26:43:1544:26:921:-62.4341,0,-118.482	0/1:60:31,29:31:1116:29:1044:-76.213,0,-82.6899	0/1:55:30,25:30:1080:25:900:-64.7644,0,-80.9566	1/1:67:0,67:0:0:67:2408:-216.975,-20.169,0	0/1:42:27,15:27:972:15:536:-35.9316,0,-75.1546	0/1:67:45,22:45:1620:22:784:-50.6864,0,-125.921	0/1:58:29,29:29:1044:29:1044:-76.8151,0,-76.8151	1/1:37:0,37:0:0:37:1332:-120.182,-11.1381,0	1/1:383:3,380:3:108:380:13523:-1206.79,-105.219,0	1/1:268:0,268:0:0:268:9600:-863.951,-80.676,0	0/1:156:96,60:96:3440:60:2152:-146.987,0,-262.852	0/1:128:45,83:45:1616:83:2969:-228.909,0,-107.198	0/1:130:51,79:51:1832:79:2816:-214.544,0,-126.027	0/1:105:39,66:39:1385:66:2366:-181.59,0,-93.3387	1/1:446:1,445:1:36:445:15910:-1427.99,-130.661,0	1/1:242:0,242:0:0:242:8633:-776.958,-72.8493,0	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	0/1:365:161,204:161:5757:204:7305:-547.622,0,-408.369	0/1:110:49,61:49:1760:61:2181:-163.441,0,-125.571	1/1:256:0,256:0:0:256:9158:-824.19,-77.0637,0	1/1:20:1,19:1:36:19:684:-58.2921,-2.42233,0	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:17:0,17:0:0:17:600:-54.3292,-5.11751,0	1/1:13:0,13:0:0:13:445:-40.3754,-3.91339,0	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	0/1:193:100,93:100:3596:93:3294:-238.579,0,-265.746	0/1:193:103,90:103:3704:90:3221:-232.013,0,-275.462	0/1:61:44,17:44:1569:17:612:-37.0506,0,-123.137	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/1:213:104,109:104:3705:109:3903:-287.344,0,-269.532	0/1:32:22,10:22:777:10:360:-23.1113,0,-60.6174	0/1:215:109,106:109:3901:106:3777:-275.397,0,-286.56	0/1:77:39,38:39:1404:38:1364:-99.8814,0,-103.48	1/1:68:0,68:0:0:68:2423:-218.326,-20.47,0	1/1:108:0,108:0:0:108:3868:-348.315,-32.5112,0	1/1:274:0,274:0:0:274:9793:-881.315,-82.4822,0	1/1:272:0,272:0:0:272:9763:-878.611,-81.8802,0	0/1:143:88,55:88:3164:55:1962:-133.808,0,-241.936	0/1:178:85,93:85:3052:93:3316:-245.069,0,-221.325	0/1:179:102,76:102:3652:76:2732:-192.179,0,-274.941	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:193:0,193:0:0:193:6928:-623.584,-58.0988,0	0/1:41:26,15:26:932:15:527:-35.418,0,-71.8566	0/1:13:2,11:2:72:11:392:-31.7067,0,-2.92333	0/1:200:95,105:95:3416:105:3742:-276.772,0,-247.447	0/1:73:28,45:28:1004:45:1612:-123.395,0,-68.7007	0/1:12:7,5:7:252:5:176:-12.5727,0,-19.4166	1/1:23:0,23:0:0:23:816:-73.7617,-6.92369,0	1/1:77:0,77:0:0:77:2755:-248.191,-23.1793,0	1/1:97:0,97:0:0:97:3480:-313.41,-29.1999,0	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	0/1:275:115,160:115:4124:160:5712:-431.416,0,-288.56	1/1:224:3,221:3:108:221:7917:-702.477,-57.3556,0	0/1:65:34,31:34:1209:31:1116:-81.1847,0,-89.5472	1/1:125:0,125:0:0:125:4471:-402.559,-37.6288,0	0/1:326:161,165:161:5784:165:5907:-433.603,0,-422.536	0/1:138:79,59:79:2840:59:2116:-149.167,0,-214.295	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	1/1:104:1,103:1:36:103:3671:-326.993,-27.7088,0	0/1:83:44,38:44:1584:38:1353:-97.0242,0,-117.807	1/1:29:0,29:0:0:29:1020:-92.1094,-8.72987,0	0/1:150:72,78:72:2592:78:2794:-206.545,0,-188.374	0/1:90:43,47:43:1533:47:1669:-123.403,0,-111.168	1/1:206:0,206:0:0:206:7262:-653.628,-62.0122,0	0/1:256:121,135:121:4333:135:4856:-360.127,0,-313.08	0/1:154:79,75:79:2836:75:2661:-193.375,0,-209.119	1/1:113:0,113:0:0:113:4044:-364.148,-34.0164,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:185:2,183:2:72:183:6556:-583.282,-48.8538,0	1/1:215:0,215:0:0:215:7684:-691.592,-64.7215,0	1/1:376:0,376:0:0:376:13508:-1215.5,-113.187,0	0/1:137:66,71:66:2361:71:2541:-187.698,0,-171.505	0/1:59:30,29:30:1076:29:1040:-76.1536,0,-79.3921	1/1:92:0,92:0:0:92:3277:-295.149,-27.6948,0	0/1:158:74,84:74:2664:84:3012:-223.748,0,-192.442	1/1:57:0,57:0:0:57:2048:-184.592,-17.1587,0	1/1:83:0,83:0:0:83:2956:-266.273,-24.9855,0	1/1:62:0,62:0:0:62:2203:-198.534,-18.6639,0	0/1:30:11,19:11:396:19:680:-52.4983,0,-26.9518	0/1:62:35,27:35:1252:27:965:-68.5027,0,-94.3212	0/1:63:45,18:45:1620:18:648:-39.687,0,-127.125	1/1:186:0,185:0:0:185:6533:-587.693,-55.6906,0	1/1:97:0,97:0:0:97:3478:-313.229,-29.1999,0
chr07	1278731	.	A	G	87985.6	PASS	AB=0.502291;ABP=3.36844;AC=52;AF=0.276596;AN=188;AO=3983;CIGAR=1X;DP=13814;DPB=13814;DPRA=1.29719;EPP=8651.98;EPPR=21303;GTI=0;LEN=1;MEANALT=1.08696;MQM=59.9761;MQMR=59.9912;NS=94;NUMALT=1;ODDS=2.70977;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=139472;QR=345155;RO=9825;RPL=1779;RPP=101.484;RPPR=60.722;RPR=2204;RUN=1;SAF=1779;SAP=101.484;SAR=2204;SRF=4659;SRP=59.822;SRR=5166;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:28:9,19:9:324:19:655:-50.8417,0,-21.077	0/1:241:140,101:140:4909:101:3520:-244.459,0,-369.418	0/1:185:83,102:83:2884:102:3563:-265.187,0,-204.104	0/1:255:128,127:128:4497:127:4475:-326.157,0,-328.138	0/0:108:105,3:105:3671:3:93:0,-23.8345,-321.919	0/0:77:76,1:76:2674:1:21:0,-21.0794,-238.807	0/1:176:91,85:91:3227:85:3015:-218.598,0,-237.67	0/0:234:233,1:233:8139:1:36:0,-66.8427,-728.94	0/0:110:110,0:110:3826:0:0:0,-33.1133,-344.541	0/1:129:58,71:58:2064:71:2496:-186.057,0,-147.198	0/0:139:139,0:139:4813:0:0:0,-41.8432,-433.337	0/1:175:96,79:96:3333:79:2775:-197.311,0,-247.511	0/1:174:92,82:92:3196:82:2849:-204.267,0,-235.487	0/1:151:84,67:84:2957:67:2292:-161.08,0,-220.909	0/0:137:137,0:137:4809:0:0:0,-41.2411,-432.972	0/1:147:65,82:65:2281:82:2904:-217.344,0,-161.3	0/1:177:100,77:100:3480:77:2658:-186.181,0,-260.133	0/1:156:70,86:70:2467:86:3001:-223.363,0,-175.325	0/0:105:103,2:103:3587:2:72:0,-24.7714,-316.203	0/0:191:191,0:191:6764:0:0:0,-57.4967,-608.835	0/0:197:197,0:197:6928:0:0:0,-59.3029,-623.598	0/1:72:20,52:20:708:52:1852:-145.284,0,-42.3714	0/1:93:50,43:50:1723:43:1500:-107.295,0,-127.356	0/1:148:81,67:81:2871:67:2349:-167.115,0,-214.076	0/1:81:34,47:34:1216:47:1627:-122.223,0,-85.3631	0/0:394:392,2:392:13873:2:68:0,-112.148,-1241.9	0/0:272:269,2:269:9492:2:64:0,-75.847,-848.157	0/0:82:82,0:82:2915:0:0:0,-24.6845,-262.586	0/1:238:131,107:131:4603:107:3757:-266.683,0,-342.79	0/1:176:102,73:102:3610:73:2531:-174.997,0,-272.066	0/0:192:192,0:192:6704:0:0:0,-57.7978,-603.451	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:22:21,1:21:726:1:36:0,-3.02438,-62.0577	0/0:5:5,0:5:165:0:0:0,-1.50515,-15.1736	0/0:8:8,0:8:257:0:0:0,-2.40824,-23.4437	0/1:16:10,6:10:356:6:213:-14.6998,0,-27.5648	0/1:365:169,196:169:5918:196:6856:-507.197,0,-422.863	0/1:118:49,69:49:1694:69:2438:-184.151,0,-117.22	0/1:168:80,88:80:2796:88:3047:-223.888,0,-201.077	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:203:126,77:126:4475:77:2697:-181.861,0,-341.811	0/1:109:60,49:60:2108:49:1724:-122.63,0,-157.175	0/1:214:107,107:107:3780:107:3723:-270.852,0,-275.981	0/1:213:90,121:90:3090:121:4244:-318.328,0,-214.515	0/1:120:64,56:64:2230:56:1939:-138.658,0,-164.838	0/0:126:123,2:123:4299:2:72:0,-31.1519,-380.253	0/0:169:169,0:169:5925:0:0:0,-50.8741,-533.367	0/0:220:220,0:220:7750:0:0:0,-66.2266,-697.541	0/1:136:71,65:71:2516:65:2279:-164.43,0,-185.75	0/1:145:71,74:71:2484:74:2628:-193.116,0,-180.164	0/1:156:77,79:77:2734:79:2804:-205.638,0,-199.34	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:219:219,0:219:7767:0:0:0,-65.9256,-699.066	0/1:81:47,34:47:1660:34:1179:-82.0274,0,-125.301	0/1:23:13,10:13:452:10:356:-25.4576,0,-34.0874	0/1:157:72,85:72:2521:85:3004:-223.33,0,-179.878	0/1:70:39,31:39:1374:31:1078:-76.2531,0,-102.885	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:24:24,0:24:834:0:0:0,-7.22472,-75.3756	0/0:67:66,1:66:2302:1:36:0,-16.5707,-203.841	0/0:218:216,2:216:7620:2:72:0,-58.7878,-679.014	0/1:5:1,4:1:32:4:144:-11.8085,0,-1.69416	0/1:202:101,101:101:3602:101:3558:-259.619,0,-263.578	0/0:212:210,2:210:7354:2:72:0,-56.9816,-655.083	0/1:135:55,79:55:1941:79:2732:-205.422,0,-134.267	0/0:119:119,0:119:4121:0:0:0,-35.8226,-371.079	0/1:200:101,99:101:3586:99:3468:-252.125,0,-262.741	0/1:156:69,87:69:2457:87:3009:-223.917,0,-174.422	0/1:73:38,35:38:1329:35:1238:-89.7477,0,-97.9323	0/0:129:125,4:125:4435:4:144:0,-25.5193,-386.009	0/1:226:108,118:108:3805:118:4105:-301.605,0,-274.619	0/0:19:19,0:19:645:0:0:0,-5.71957,-58.367	0/1:86:48,38:48:1696:38:1314:-92.6664,0,-127.035	0/1:88:45,43:45:1593:43:1512:-109.88,0,-117.168	0/0:250:248,2:248:8664:2:72:0,-68.4208,-772.937	0/1:188:95,93:95:3370:93:3307:-241.253,0,-246.921	0/1:145:67,78:67:2361:78:2758:-204.811,0,-169.099	0/0:179:175,4:175:6224:4:144:0,-40.5707,-546.945	0/0:13:13,0:13:460:0:0:0,-3.91339,-41.7354	0/0:231:231,0:231:8182:0:0:0,-69.5379,-736.396	0/0:191:190,1:190:6758:1:32:0,-54.2974,-605.099	0/0:283:283,0:283:9950:0:0:0,-85.1915,-895.455	0/1:206:95,111:95:3289:111:3844:-284.145,0,-234.222	0/1:167:85,82:85:2973:82:2894:-210.426,0,-217.531	0/0:212:212,0:212:7367:0:0:0,-63.8184,-662.727	0/1:334:162,172:162:5672:172:6043:-443.436,0,-410.066	0/0:117:116,1:116:4039:1:36:0,-31.6222,-360.105	0/0:140:140,0:140:4888:0:0:0,-42.1442,-440.078	0/0:128:128,0:128:4486:0:0:0,-38.5318,-403.913	0/1:149:68,81:68:2397:81:2864:-213.143,0,-171.133	0/1:205:116,89:116:4063:89:3146:-221.654,0,-304.149	0/1:193:72,121:72:2503:121:4186:-318.808,0,-167.424	0/0:137:137,0:137:4821:0:0:0,-41.2411,-434.05	0/0:239:234,5:234:8170:5:180:0,-55.3941,-718.775
chr07	1278739	.	T	A	269786	PASS	AB=0.508103;ABP=7.51491;AC=136;AF=0.723404;AN=188;AO=10220;CIGAR=1X;DP=14137;DPB=14137;DPRA=0;EPP=22195.5;EPPR=8495.64;GTI=0;LEN=1;MEANALT=1.05319;MQM=59.9813;MQMR=59.9821;NS=94;NUMALT=1;ODDS=6.86305;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=362480;QR=138840;RO=3911;RPL=4621;RPP=206.237;RPPR=102.356;RPR=5599;RUN=1;SAF=4621;SAP=206.237;SAR=5599;SRF=1744;SRP=102.356;SRR=2167;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:18,12:18:640:12:432:-30.1903,0,-48.8984	0/1:236:97,139:97:3434:139:4890:-369.212,0,-238.23	0/1:186:101,85:101:3606:85:3029:-216.849,0,-268.754	0/1:253:121,132:121:4295:132:4690:-346.099,0,-310.57	1/1:114:3,111:3:89:111:3945:-346.94,-26.0131,0	1/1:82:1,81:1:36:81:2884:-256.197,-21.0862,0	0/1:181:86,95:86:3061:95:3402:-251.908,0,-221.232	1/1:251:0,251:0:0:251:8885:-799.64,-75.5585,0	1/1:121:0,121:0:0:121:4292:-386.461,-36.4246,0	0/1:131:70,61:70:2508:61:2180:-157.031,0,-186.537	1/1:139:0,139:0:0:139:4903:-441.427,-41.8432,0	0/1:176:81,95:81:2865:95:3355:-249.188,0,-205.106	0/1:171:81,90:81:2863:90:3133:-230.721,0,-206.433	0/1:156:70,86:70:2465:86:3064:-229.029,0,-175.143	1/1:140:0,140:0:0:140:5003:-450.418,-42.1442,0	0/1:145:79,66:79:2820:66:2355:-168.559,0,-210.39	0/1:180:79,101:79:2816:101:3568:-267.144,0,-199.495	0/1:159:89,70:89:3155:70:2495:-176.938,0,-236.313	1/1:111:2,109:2:72:109:3848:-339.682,-26.5776,0	1/1:195:0,195:0:0:195:6969:-627.274,-58.7009,0	1/1:215:0,215:0:0:215:7579:-682.162,-64.7215,0	0/1:71:49,21:49:1751:21:752:-46.5744,0,-136.442	0/1:90:43,47:43:1509:47:1646:-121.332,0,-109.008	0/1:150:66,84:66:2340:84:2973:-222.65,0,-165.706	0/1:77:44,33:44:1557:33:1169:-82.336,0,-117.24	1/1:403:2,401:2:72:401:14227:-1273.36,-114.478,0	1/1:295:1,294:1:36:294:10452:-937.005,-85.2056,0	1/1:85:0,85:0:0:85:3012:-271.313,-25.5876,0	0/1:240:105,135:105:3742:135:4803:-360.178,0,-264.733	0/1:176:70,106:70:2488:106:3787:-287.99,0,-171.19	1/1:200:0,200:0:0:200:7044:-634.032,-60.206,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:25:1,24:1:36:24:860:-74.1236,-3.92748,0	1/1:7:0,7:0:0:7:244:-22.2994,-2.10721,0	1/1:7:0,7:0:0:7:238:-21.752,-2.10721,0	0/1:14:6,8:6:216:8:284:-21.6889,0,-15.5761	0/1:358:183,175:183:6516:175:6216:-451.771,0,-478.757	0/1:125:71,54:71:2532:54:1936:-136.888,0,-190.503	0/1:174:91,83:91:3239:83:2919:-210.495,0,-239.353	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:200:75,125:75:2666:125:4404:-336.326,0,-179.979	0/1:108:48,60:48:1720:60:2140:-160.357,0,-122.574	0/1:211:103,108:103:3672:108:3856:-283.719,0,-267.038	0/1:212:118,94:118:4180:94:3311:-234.391,0,-312.566	0/1:122:59,63:59:2085:63:2241:-165.228,0,-151.193	1/1:136:1,135:1:32:135:4761:-425.453,-37.7408,0	1/1:177:0,177:0:0:177:6270:-564.397,-53.2823,0	1/1:224:0,224:0:0:224:8008:-720.743,-67.4307,0	0/1:137:65,72:65:2288:72:2572:-190.489,0,-164.939	0/1:154:75,79:75:2688:79:2793:-205.252,0,-195.806	0/1:155:76,79:76:2695:79:2796:-205.22,0,-196.136	1/1:26:0,26:0:0:26:928:-83.8383,-7.82678,0	1/1:224:0,224:0:0:224:7943:-714.897,-67.4307,0	0/1:82:35,47:35:1252:47:1684:-127.162,0,-88.3006	0/1:24:11,13:11:396:13:460:-34.5107,0,-28.758	0/1:158:83,75:83:2958:75:2680:-193.883,0,-218.89	0/1:75:33,42:33:1184:42:1465:-109.562,0,-84.2911	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	1/1:74:1,73:1:36:73:2565:-227.503,-18.6779,0	1/1:222:1,221:1:36:221:7866:-704.374,-63.2304,0	0/1:7:6,1:6:208:1:36:-1.49107,0,-16.9519	0/1:209:103,106:103:3643:106:3742:-274.064,0,-265.158	1/1:225:2,223:2:72:223:7886:-702.933,-60.895,0	0/1:131:76,55:76:2683:55:1960:-137.241,0,-202.279	1/1:130:0,130:0:0:130:4627:-416.596,-39.1339,0	0/1:208:99,109:99:3532:109:3863:-285.251,0,-255.476	0/1:159:86,73:86:3046:73:2612:-187.464,0,-225.485	0/1:74:35,39:35:1248:39:1368:-101.142,0,-90.3486	1/1:135:4,130:4:136:130:4636:-404.825,-28.1183,0	0/1:225:112,113:112:3980:113:3999:-292.333,0,-290.662	1/1:21:0,21:0:0:21:725:-65.5677,-6.32163,0	0/1:90:35,55:35:1209:55:1948:-148.501,0,-82.0154	0/1:95:42,53:42:1481:53:1889:-141.689,0,-104.985	1/1:267:0,267:0:0:267:9442:-849.753,-80.375,0	0/1:188:88,100:88:3101:100:3567:-264.643,0,-222.723	0/1:149:77,72:77:2716:72:2532:-183.267,0,-199.83	1/1:183:4,179:4:144:179:6355:-558.73,-41.7749,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:239:0,239:0:0:239:8454:-760.859,-71.9462,0	1/1:210:0,210:0:0:210:7470:-672.348,-63.2163,0	1/1:290:1,289:1:36:289:10252:-919.017,-83.7004,0	0/1:203:106,97:106:3780:97:3407:-245.738,0,-279.291	0/1:173:86,87:86:3019:87:3095:-226.699,0,-219.864	1/1:221:0,221:0:0:221:7822:-704.001,-66.5276,0	0/1:333:173,159:173:6148:159:5635:-407.063,0,-453.213	1/1:117:0,117:0:0:117:4150:-373.685,-35.2205,0	1/1:144:0,144:0:0:144:5083:-457.619,-43.3483,0	1/1:135:1,132:1:36:132:4690:-418.664,-36.7985,0	0/1:146:78,67:78:2788:67:2369:-169.46,0,-207.152	0/1:206:88,118:88:3100:118:4175:-313.921,0,-217.216	0/1:181:109,72:109:3871:72:2553:-175.533,0,-294.056	1/1:149:0,149:0:0:149:5309:-477.944,-44.8535,0	1/1:240:4,236:4:144:236:8395:-742.244,-58.9336,0
chr07	1310012	.	A	G	109748	PASS	AB=0.491363;ABP=8.97412;AC=53;AF=0.281915;AN=188;AO=4541;CIGAR=1X;DP=16296;DPB=16296;DPRA=1.1233;EPP=102.88;EPPR=731.25;GTI=0;LEN=1;MEANALT=1.06349;MQM=59.9866;MQMR=59.9912;NS=94;NUMALT=1;ODDS=5.91456;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161343;QR=418896;RO=11749;RPL=577;RPP=5488.72;RPPR=11459;RPR=3964;RUN=1;SAF=2619;SAP=235.321;SAR=1922;SRF=6820;SRP=663.911;SRR=4929;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:42,26:42:1508:26:932:-63.7288,0,-115.545	0/1:318:172,146:172:6126:146:5138:-366.838,0,-454.61	0/1:257:122,135:122:4335:135:4753:-350.566,0,-312.961	0/1:361:163,198:163:5777:198:7037:-524.722,0,-411.375	0/0:149:149,0:149:5319:0:0:0,-44.8535,-478.842	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/1:141:61,80:61:2188:80:2862:-215.372,0,-154.74	0/0:290:290,0:290:10371:0:0:0,-87.2987,-933.301	0/0:168:168,0:168:5965:0:0:0,-50.573,-536.959	0/1:162:86,76:86:3053:76:2694:-193.938,0,-226.232	0/0:135:135,0:135:4785:0:0:0,-40.639,-430.807	0/1:160:96,64:96:3448:64:2272:-156.575,0,-262.367	0/1:117:57,60:57:2024:60:2139:-157.557,0,-147.21	0/1:175:82,93:82:2915:93:3314:-245.37,0,-209.906	0/0:131:131,0:131:4654:0:0:0,-39.4349,-419.022	0/1:117:64,53:64:2288:53:1896:-135.698,0,-170.961	0/1:156:83,73:83:2922:73:2575:-185.037,0,-216.254	0/1:125:60,65:60:2148:65:2312:-170.71,0,-155.959	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.553	0/0:472:470,2:470:16780:2:72:0,-135.249,-1503.01	0/0:163:163,0:163:5806:0:0:0,-49.0679,-522.653	0/1:84:29,55:29:1016:55:1963:-151.658,0,-66.4624	0/1:133:72,60:72:2563:60:2101:-149.406,0,-190.971	0/1:240:141,99:141:5006:99:3507:-243.593,0,-378.441	0/1:111:62,49:62:2204:49:1748:-124.19,0,-165.209	0/0:432:432,0:432:15379:0:0:0,-130.045,-1383.82	0/0:387:386,1:386:13760:1:36:0,-112.9,-1234.59	0/0:69:69,0:69:2461:0:0:0,-20.7711,-221.743	0/1:540:297,243:297:10576:243:8639:-614.948,0,-789.198	0/1:146:69,77:69:2472:77:2720:-201.092,0,-178.783	0/0:143:142,1:142:5037:1:36:0,-39.449,-449.879	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:28:27,1:27:953:1:36:0,-4.83056,-82.485	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:12:11,1:11:396:1:36:0,-0.0140849,-32.3845	0/1:30:17,13:17:612:13:444:-31.2532,0,-46.3825	0/1:404:203,200:203:7216:200:7061:-514.037,0,-527.978	0/1:191:88,103:88:3125:103:3683:-274.176,0,-223.977	0/1:149:70,79:70:2512:79:2827:-209.815,0,-181.478	0/1:11:5,6:5:180:6:212:-16.1135,0,-13.2407	0/1:612:334,278:334:11919:278:9942:-710.487,0,-888.332	0/1:69:40,29:40:1436:29:1040:-73.1433,0,-108.767	0/1:237:119,118:119:4256:118:4160:-303.239,0,-311.875	0/1:162:85,77:85:3036:77:2730:-197.176,0,-224.701	0/1:129:67,62:67:2380:62:2232:-162.311,0,-175.623	0/0:126:126,0:126:4513:0:0:0,-37.9298,-406.335	0/0:247:246,0:246:8797:0:0:0,-74.0534,-791.357	0/0:244:241,2:241:8614:2:72:0,-66.6734,-768.419	0/1:170:90,80:90:3201:80:2844:-205.022,0,-237.135	0/1:299:169,130:169:6040:130:4629:-326.766,0,-453.694	0/1:214:106,107:106:3770:107:3784:-276.435,0,-275.175	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:356:356,0:356:12644:0:0:0,-107.167,-1137.79	0/1:62:35,27:35:1252:27:972:-69.134,0,-94.3212	0/1:13:4,9:4:144:9:312:-24.5014,0,-9.40023	0/1:242:130,112:130:4600:112:3969:-284.554,0,-341.313	0/1:74:37,37:37:1320:37:1306:-95.5637,0,-96.8257	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:86:86,0:86:3065:0:0:0,-25.8886,-276.078	0/0:205:203,2:203:7283:2:72:0,-54.8744,-648.682	0/1:14:8,6:8:279:6:212:-15.2104,0,-21.2331	0/1:241:114,127:114:4041:127:4513:-333.791,0,-291.329	0/0:241:236,5:236:8413:5:180:0,-55.9962,-740.622	0/1:149:86,63:86:3065:63:2251:-157.999,0,-231.224	0/0:194:194,0:194:6921:0:0:0,-58.3998,-622.955	0/1:220:117,103:117:4144:103:3664:-263.736,0,-306.916	0/1:172:55,117:55:1919:117:4187:-325.234,0,-121.204	0/1:64:29,35:29:1031:35:1252:-93.7192,0,-73.8367	0/0:123:123,0:123:4367:0:0:0,-37.0267,-393.205	0/1:179:82,97:82:2944:97:3437:-255.657,0,-211.309	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:120:54,66:54:1925:66:2356:-176.175,0,-137.401	0/1:113:48,65:48:1705:65:2294:-172.702,0,-119.718	0/0:214:213,0:213:7551:0:0:0,-64.1194,-679.273	0/1:327:172,155:172:6131:155:5517:-398.218,0,-453.453	0/1:172:82,90:82:2931:90:3219:-238.155,0,-212.247	0/0:274:274,0:274:9747:0:0:0,-82.4822,-877.149	0/0:14:14,0:14:496:0:0:0,-4.21442,-44.9743	0/0:306:306,0:306:10965:0:0:0,-92.1152,-986.743	0/0:250:250,0:250:8939:0:0:0,-75.2575,-804.493	0/0:454:454,0:454:16204:0:0:0,-136.668,-1458.03	0/1:200:103,97:103:3649:97:3463:-251.676,0,-268.407	0/1:91:53,38:53:1908:38:1337:-93.2342,0,-144.604	0/0:156:156,0:156:5568:0:0:0,-46.9607,-501.243	0/1:254:126,128:126:4512:128:4560:-334.105,0,-329.786	0/0:76:76,0:76:2715:0:0:0,-22.8783,-244.593	0/0:125:125,0:125:4488:0:0:0,-37.6287,-404.088	0/0:150:150,0:150:5350:0:0:0,-45.1545,-481.631	0/1:119:65,54:65:2323:54:1914:-136.713,0,-173.507	0/1:177:79,98:79:2840:98:3492:-261.209,0,-202.555	0/1:108:48,60:48:1711:60:2098:-156.578,0,-121.764	0/0:164:163,1:163:5833:1:36:0,-45.7706,-521.483	0/0:231:229,2:229:8199:2:72:0,-62.7012,-731.085
chr07	1315670	.	AC	GT	197800	PASS	AB=0.485431;ABP=16.044;AC=134;AF=0.712766;AN=188;AO=9770;CIGAR=2X;DP=13434;DPB=13434.5;DPRA=24.0645;EPP=21209.6;EPPR=7920.2;GTI=1;LEN=2;MEANALT=1.15054;MQM=59.9817;MQMR=59.9975;NS=94;NUMALT=1;ODDS=16.997;PAIRED=0;PAIREDR=0;PAO=1;PQA=36;PQR=0;PRO=0;QA=342362;QR=128284;RO=3646;RPL=0;RPP=21218.3;RPPR=7920.2;RPR=9770;RUN=1;SAF=1;SAP=21209.6;SAR=9769;SRF=0;SRP=7920.2;SRR=3646;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:112:60,52:60:2078:52:1805:-129.011,0,-153.57	0/1:122:65,57:65:2311:57:1975:-141.296,0,-171.526	0/1:234:103,131:103:3634:131:4596:-343.366,0,-256.824	0/1:335:156,179:156:5472:179:6317:-467.782,0,-391.767	1/1:165:1,164:1:36:164:5765:-515.375,-46.0717,0	1/1:118:0,118:0:0:118:4133:-372.157,-35.5215,0	0/1:144:88,56:88:3113:56:1936:-131.162,0,-237.049	1/1:323:0,322:0:0:322:11327:-1019.06,-96.9317,0	1/1:214:0,214:0:0:214:7394:-665.519,-64.4204,0	0/1:117:79,37:79:2796:37:1271:-79.4067,0,-216.601	1/1:40:0,40:0:0:40:1416:-127.736,-12.0412,0	0/1:119:63,56:63:2215:56:1979:-142.56,0,-163.791	0/1:68:31,37:31:1112:37:1280:-95.0271,0,-79.9215	0/1:37:10,27:10:360:27:954:-75.0358,0,-21.6062	1/1:68:0,68:0:0:68:2396:-215.896,-20.47,0	0/1:89:37,52:37:1278:52:1812:-136.565,0,-88.524	0/1:28:11,17:11:369:17:597:-45.6278,0,-25.1023	0/1:32:20,12:20:705:12:426:-29.045,0,-54.1409	1/1:29:0,29:0:0:29:994:-89.7655,-8.72987,0	1/1:354:0,354:0:0:354:12493:-1124.15,-106.565,0	1/1:319:0,317:0:0:317:11050:-994.164,-95.4265,0	0/1:219:140,79:140:4924:79:2785:-184.965,0,-377.389	0/1:176:94,80:94:3300:80:2808:-200.221,0,-244.48	0/1:87:58,29:58:2068:29:1031:-66.9139,0,-160.202	0/1:174:96,78:96:3351:78:2743:-194.734,0,-249.428	1/1:433:4,429:4:144:429:15054:-1341.3,-117.032,0	1/1:468:1,466:1:36:466:16322:-1465.18,-137.239,0	1/1:24:0,24:0:0:24:851:-76.9101,-7.22472,0	0/1:461:227,233:227:8008:233:8139:-593.758,0,-581.969	0/1:111:59,52:59:2082:52:1824:-131.024,0,-154.233	1/1:181:0,181:0:0:181:6369:-573.271,-54.4864,0	1/1:52:0,52:0:0:52:1844:-166.239,-15.6536,0	1/1:54:0,54:0:0:54:1868:-168.022,-16.2556,0	1/1:16:0,16:0:0:16:561:-50.8182,-4.81648,0	1/1:25:0,25:0:0:25:870:-78.6137,-7.52575,0	0/1:62:31,31:31:1106:31:1079:-78.7508,0,-81.1873	0/1:216:98,118:98:3472:118:4133:-307.136,0,-247.668	0/1:229:102,127:102:3601:127:4434:-330.298,0,-255.361	0/1:53:28,25:28:971:25:881:-63.6526,0,-71.7448	0/0:6:6,0:6:201:0:0:0,-1.80618,-18.417	0/1:146:72,74:72:2538:74:2595:-189.849,0,-184.72	0/1:32:13,19:13:468:19:669:-50.9021,0,-32.8267	0/1:277:163,114:163:5723:114:4010:-277.706,0,-431.805	0/1:49:23,26:23:815:26:930:-69.2684,0,-58.92	0/1:53:20,33:20:690:33:1167:-89.3819,0,-46.4639	1/1:197:0,197:0:0:197:6972:-627.55,-59.3029,0	1/1:267:0,266:0:0:266:9296:-836.22,-80.074,0	1/1:338:0,334:0:0:334:11743:-1056.39,-100.544,0	0/1:152:68,84:68:2373:84:2964:-221.235,0,-168.069	0/1:206:94,112:94:3346:112:3973:-295.748,0,-239.344	0/1:146:88,58:88:3083:58:2049:-140.73,0,-233.747	1/1:21:0,21:0:0:21:748:-67.6457,-6.32163,0	1/1:178:0,178:0:0:178:6287:-565.928,-53.5833,0	0/1:78:44,34:44:1572:34:1200:-84.8226,0,-118.292	0/1:24:20,4:20:708:4:144:-6.0889,0,-56.8205	0/1:259:124,135:124:4361:135:4697:-344.927,0,-314.7	0/1:101:56,45:56:1969:45:1599:-113.796,0,-147.08	0/1:28:14,14:14:494:14:486:-35.6391,0,-36.3642	1/1:14:0,14:0:0:14:473:-42.8911,-4.21442,0	1/1:88:0,88:0:0:88:3049:-274.638,-26.4906,0	1/1:86:0,86:0:0:86:3016:-271.671,-25.8886,0	0/1:20:9,11:9:324:11:396:-29.9621,0,-23.4853	0/1:335:178,157:178:6259:157:5468:-391.407,0,-462.565	1/1:231:2,229:2:72:229:7985:-711.847,-62.7012,0	0/1:88:42,46:42:1484:46:1598:-117.615,0,-107.363	1/1:207:0,206:0:0:206:7271:-654.086,-62.0122,0	0/1:302:133,167:133:4673:167:5848:-435.824,0,-330.119	0/1:306:188,118:188:6608:118:4152:-281.749,0,-502.689	0/1:24:11,12:11:383:12:430:-31.7567,0,-27.5204	1/1:89:0,89:0:0:89:3096:-278.867,-26.7917,0	0/1:33:23,10:23:813:10:349:-21.8108,0,-63.5557	1/1:20:0,20:0:0:20:698:-63.142,-6.0206,0	0/1:167:86,81:86:2965:81:2801:-202.057,0,-216.811	0/1:165:86,79:86:2985:79:2741:-197.259,0,-219.202	1/1:182:0,182:0:0:182:6372:-573.577,-54.7875,0	0/1:252:115,136:115:4099:136:4805:-356.688,0,-293.178	0/1:198:94,104:94:3303:104:3630:-267.303,0,-237.885	1/1:151:2,149:2:72:149:5212:-462.384,-38.6188,0	1/1:62:0,62:0:0:62:2166:-195.203,-18.6639,0	1/1:181:0,181:0:0:181:6287:-565.934,-54.4864,0	1/1:176:0,176:0:0:176:6182:-556.481,-52.9813,0	1/1:501:0,501:0:0:501:17463:-1571.33,-150.816,0	0/1:62:41,21:41:1444:21:754:-49.523,0,-111.59	0/1:62:30,32:30:1052:32:1121:-82.5325,0,-76.3246	1/1:52:0,52:0:0:52:1832:-165.158,-15.6536,0	0/1:122:53,69:53:1835:69:2437:-182.86,0,-128.699	1/1:27:0,27:0:0:27:932:-84.1897,-8.12781,0	1/1:71:0,71:0:0:71:2443:-220.121,-21.3731,0	1/1:70:0,70:0:0:70:2484:-223.812,-21.0721,0	0/1:23:12,11:12:414:11:389:-28.4243,0,-30.666	0/1:55:26,29:26:910:29:1024:-75.9149,0,-65.6577	0/1:80:48,32:48:1706:32:1100:-75.2209,0,-129.743	1/1:149:0,149:0:0:149:5209:-468.941,-44.8535,0	1/1:117:0,117:0:0:117:4108:-369.908,-35.2205,0
chr07	1315696	.	G	A	61273.1	PASS	AB=0.507853;ABP=6.7617;AC=54;AF=0.287234;AN=188;AO=3577;CIGAR=1X;DP=13390;DPB=13390;DPRA=1.06861;EPP=7666.49;EPPR=20138.1;GTI=1;LEN=1;MEANALT=1.05;MQM=59.9944;MQMR=59.975;NS=94;NUMALT=1;ODDS=18.6328;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=127761;QR=350321;RO=9809;RPL=3565;RPP=7666.49;RPPR=20146.5;RPR=12;RUN=1;SAF=0;SAP=7770.37;SAR=3577;SRF=1;SRP=21294.3;SRR=9808;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:111:53,58:53:1884:58:2060:-152.255,0,-136.424	0/1:118:55,63:55:1946:63:2256:-167.781,0,-139.893	0/1:231:130,101:130:4635:101:3622:-256.646,0,-347.776	0/1:334:181,152:181:6436:152:5422:-387.505,0,-478.727	0/0:166:164,1:164:5867:1:36:0,-46.4315,-524.543	0/0:112:112,0:112:3997:0:0:0,-33.7154,-359.919	0/1:142:54,88:54:1914:88:3117:-238.011,0,-129.79	0/0:326:326,0:326:11610:0:0:0,-98.1358,-1044.77	0/0:214:214,0:214:7642:0:0:0,-64.4204,-687.818	0/1:112:36,76:36:1284:76:2703:-209.797,0,-82.1481	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:119:56,63:56:2012:63:2255:-167.39,0,-145.531	0/1:71:39,32:39:1404:32:1148:-82.2567,0,-105.286	0/1:39:29,10:29:1029:10:351:-20.1865,0,-81.181	0/0:68:68,0:68:2427:0:0:0,-20.47,-218.685	0/1:87:51,36:51:1815:36:1292:-90.3942,0,-137.441	0/1:27:17,10:17:595:10:360:-24.6165,0,-45.7489	0/1:32:11,21:11:396:21:752:-58.3733,0,-26.3498	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/0:352:352,0:352:12579:0:0:0,-105.963,-1131.62	0/0:319:319,0:319:11392:0:0:0,-96.0286,-1025.16	0/1:216:80,136:80:2850:136:4888:-375.047,0,-191.715	0/1:171:79,92:79:2819:92:3280:-243.945,0,-202.473	0/1:86:27,59:27:968:59:2112:-164.46,0,-61.5488	0/1:171:77,93:77:2746:93:3315:-247.033,0,-195.847	0/0:437:433,4:433:15481:4:144:0,-118.236,-1379.68	0/0:467:465,2:465:16676:2:72:0,-133.744,-1491.85	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/1:463:239,224:239:8537:224:7980:-578.847,0,-628.952	0/1:107:51,56:51:1828:56:2008:-148.783,0,-132.591	0/0:182:182,0:182:6482:0:0:0,-54.7875,-583.418	0/0:53:53,0:53:1896:0:0:0,-15.9546,-170.918	0/0:53:53,0:53:1900:0:0:0,-15.9546,-170.421	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/1:62:31,31:31:1095:31:1088:-79.5626,0,-80.1952	0/1:213:116,97:116:4147:97:3488:-250.01,0,-309.271	0/1:227:129,98:129:4612:98:3501:-246.965,0,-346.911	0/1:52:24,28:24:855:28:993:-74.0289,0,-61.6166	1/1:7:0,7:0:0:7:234:-21.3866,-2.10721,0	0/1:147:75,72:75:2700:72:2561:-186.488,0,-198.992	0/1:32:19,13:19:684:13:468:-32.8267,0,-52.2574	0/1:274:116,158:116:4142:158:5656:-426.678,0,-290.481	0/1:50:27,23:27:968:23:828:-59.7926,0,-72.3859	0/1:53:34,19:34:1224:19:680:-45.5746,0,-94.5125	0/0:199:198,1:198:7036:1:36:0,-56.3067,-629.708	0/0:265:265,0:265:9493:0:0:0,-79.7729,-853.769	0/0:345:344,0:344:12291:0:0:0,-103.554,-1105.67	0/1:155:86,69:86:3088:69:2453:-174.365,0,-231.488	0/1:206:113,93:113:4039:93:3328:-237.726,0,-301.686	0/1:144:57,87:57:2035:87:3120:-237.678,0,-140.073	0/0:22:22,0:22:779:0:0:0,-6.62266,-70.4321	0/0:178:178,0:178:6358:0:0:0,-53.5833,-572.311	0/1:78:34,44:34:1224:44:1551:-116.398,0,-86.9867	0/1:24:4,20:4:144:20:720:-57.9041,0,-6.0889	0/1:261:139,122:139:4961:122:4371:-314.994,0,-368.07	0/1:99:44,55:44:1567:55:1964:-147.233,0,-111.519	0/1:25:12,13:12:432:13:451:-33.3941,0,-31.6954	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:90:90,0:90:3219:0:0:0,-27.0927,-289.932	0/0:86:85,1:85:3035:1:36:0,-22.2903,-269.782	0/1:20:11,9:11:396:9:324:-23.4853,0,-29.9621	0/1:329:157,172:157:5624:172:6172:-456.537,0,-407.242	0/0:235:233,2:233:8316:2:72:0,-63.9053,-741.612	0/1:86:46,40:46:1635:40:1436:-103.649,0,-121.549	0/0:207:207,0:207:7406:0:0:0,-62.3132,-666.585	0/1:299:169,130:169:6038:130:4663:-329.822,0,-453.516	0/1:304:118,186:118:4206:186:6638:-505.984,0,-287.208	0/1:25:13,12:13:468:12:428:-31.3331,0,-34.9339	0/0:88:88,0:88:3147:0:0:0,-26.4906,-283.455	0/1:33:10,23:10:351:23:827:-64.82,0,-21.9927	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:163:82,81:82:2910:81:2874:-209.829,0,-213.066	0/1:161:78,83:78:2783:83:2954:-217.626,0,-202.243	0/0:186:186,0:186:6626:0:0:0,-55.9916,-596.419	0/1:250:139,111:139:4991:111:3969:-282.143,0,-374.078	0/1:198:105,93:105:3741:93:3298:-237.436,0,-277.286	0/0:149:147,2:147:5272:2:72:0,-38.0167,-467.778	0/0:62:62,0:62:2232:0:0:0,-18.6639,-201.144	0/0:178:178,0:178:6358:0:0:0,-53.5833,-572.311	0/0:177:177,0:177:6283:0:0:0,-53.2823,-565.559	0/0:502:502,0:502:17863:0:0:0,-151.117,-1607.25	0/1:61:20,41:20:720:41:1468:-114.053,0,-46.7659	0/1:64:34,30:34:1211:30:1071:-77.4357,0,-90.0296	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/1:118:67,51:67:2400:51:1832:-129.639,0,-180.735	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:72:72,0:72:2569:0:0:0,-21.6742,-231.458	0/0:71:71,0:71:2531:0:0:0,-21.3731,-228.041	0/1:23:11,12:11:387:12:428:-31.9351,0,-28.2422	0/1:53:29,24:29:1040:24:864:-62.128,0,-77.9598	0/1:78:31,47:31:1108:47:1671:-127.196,0,-76.5507	0/0:147:147,0:147:5247:0:0:0,-44.2514,-472.368	0/0:119:119,0:119:4263:0:0:0,-35.8226,-383.847
chr07	1430536	.	C	G	171685	PASS	AB=0.46752;ABP=40.9552;AC=139;AF=0.739362;AN=188;AO=8167;CIGAR=1X;DP=10419;DPB=10419;DPRA=12.4373;EPP=17702.7;EPPR=4677.9;GTI=1;LEN=1;MEANALT=1.09677;MQM=59.9638;MQMR=59.975;NS=94;NUMALT=1;ODDS=19.0589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=287911;QR=79272;RO=2240;RPL=5;RPP=17694;RPPR=4677.9;RPR=8162;RUN=1;SAF=1;SAP=17728.7;SAR=8166;SRF=0;SRP=4867.11;SRR=2240;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:9:9,0:9:316:0:0:0,-2.70927,-28.7789	0/1:109:55,54:55:1976:54:1915:-139.813,0,-145.302	0/1:52:26,26:26:936:26:932:-68.5453,0,-68.9059	0/1:156:93,63:93:3328:63:2248:-155.622,0,-252.777	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:47:1,46:1:36:46:1640:-144.29,-10.5501,0	0/1:103:44,59:44:1555:59:2100:-158.264,0,-108.864	0/1:88:30,58:30:1063:58:2051:-158.369,0,-69.4902	1/1:85:1,84:1:36:84:2991:-265.824,-21.9893,0	0/1:76:42,33:42:1495:33:1173:-83.0558,0,-112.024	1/1:165:0,165:0:0:165:5796:-521.76,-49.67,0	0/1:84:54,30:54:1893:30:1035:-68.1688,0,-145.357	0/1:69:51,18:51:1788:18:635:-36.7059,0,-140.429	0/1:84:55,29:55:1916:29:1027:-67.4557,0,-147.426	1/1:36:0,36:0:0:36:1288:-116.224,-10.8371,0	0/1:81:50,31:50:1775:31:1093:-74.2942,0,-135.649	0/1:81:52,29:52:1844:29:1044:-69.8914,0,-141.854	0/1:80:55,25:55:1936:25:851:-52.8155,0,-150.432	1/1:143:0,143:0:0:143:5064:-455.904,-43.0473,0	1/1:101:0,101:0:0:101:3536:-318.447,-30.404,0	1/1:87:0,86:0:0:86:3048:-274.191,-25.8886,0	0/1:40:28,12:28:984:12:409:-25.0942,0,-76.8295	0/1:59:27,32:27:950:32:1140:-85.1484,0,-68.0527	0/1:86:35,51:35:1256:51:1777:-134.32,0,-87.4567	0/1:79:44,35:44:1559:35:1216:-85.9591,0,-116.82	1/1:150:0,150:0:0:150:5316:-478.576,-45.1545,0	1/1:170:0,170:0:0:170:5971:-537.504,-51.1751,0	1/1:5:0,5:0:0:5:171:-15.7255,-1.50515,0	0/1:121:55,66:55:1956:66:2328:-173.355,0,-139.891	0/1:99:45,54:45:1590:54:1915:-142.824,0,-113.587	1/1:50:0,50:0:0:50:1778:-160.301,-15.0515,0	1/1:158:1,157:1:36:157:5527:-493.962,-43.9645,0	1/1:344:0,344:0:0:344:12113:-1090.04,-103.554,0	1/1:868:0,868:0:0:868:30595:-2752.61,-261.294,0	1/1:535:1,533:1:36:533:18852:-1692.63,-157.457,0	1/1:142:4,138:4:144:138:4869:-425.05,-29.4326,0	0/1:191:120,70:120:4253:70:2465:-164.674,0,-325.525	0/1:73:27,46:27:951:46:1609:-123.121,0,-63.9291	0/1:151:38,113:38:1323:113:3923:-307.792,0,-73.9105	1/1:80:0,80:0:0:80:2826:-254.579,-24.0824,0	0/1:88:45,43:45:1590:43:1539:-112.312,0,-116.898	0/1:58:22,36:22:761:36:1261:-96.3315,0,-51.3469	0/1:52:25,27:25:883:27:940:-69.2572,0,-64.1339	0/1:66:56,10:56:1966:10:356:-12.5133,0,-157.343	0/1:61:46,15:46:1602:15:506:-27.495,0,-126.102	1/1:90:0,90:0:0:90:3175:-285.975,-27.0927,0	1/1:100:0,100:0:0:100:3533:-318.179,-30.103,0	1/1:167:0,167:0:0:167:5851:-526.706,-50.272,0	0/1:88:56,32:56:1990:32:1133:-75.787,0,-152.846	0/1:76:42,34:42:1508:34:1201:-85.5162,0,-113.136	0/1:89:52,37:52:1832:37:1315:-91.8584,0,-138.366	1/1:473:0,473:0:0:473:16741:-1506.36,-142.387,0	1/1:69:0,69:0:0:69:2444:-220.214,-20.7711,0	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	1/1:249:10,239:10:360:239:8390:-722.371,-42.2122,0	0/1:104:58,46:58:2067:46:1640:-116.582,0,-154.993	0/1:49:33,16:33:1167:16:568:-36.7014,0,-90.5859	1/1:250:5,245:5:180:245:8570:-754.712,-58.7054,0	1/1:172:0,172:0:0:172:6098:-548.926,-51.7772,0	1/1:35:0,33:0:0:33:1159:-104.257,-9.93399,0	1/1:66:1,65:1:36:65:2244:-198.62,-16.2697,0	1/1:67:4,63:4:144:63:2234:-188.009,-6.85539,0	0/1:120:86,31:86:3075:31:1085:-62.3785,0,-241.398	1/1:101:0,99:0:0:99:3470:-312.15,-29.802,0	0/1:49:38,11:38:1364:11:380:-19.7793,0,-108.31	1/1:61:0,61:0:0:61:2176:-196.107,-18.3628,0	0/1:88:44,44:44:1576:44:1551:-113.388,0,-115.641	0/1:55:36,19:36:1283:19:672:-44.2502,0,-99.216	0/1:111:26,85:26:915:85:3007:-237.446,0,-49.2512	1/1:65:0,65:0:0:65:2252:-202.94,-19.567,0	0/1:62:43,19:43:1509:19:671:-42.0519,0,-117.437	1/1:119:0,119:0:0:119:4199:-378.093,-35.8226,0	0/1:61:31,30:31:1108:30:1044:-75.9051,0,-81.6682	0/1:29:26,3:26:908:3:108:-1.3453,0,-73.3026	1/1:87:0,87:0:0:87:3094:-278.688,-26.1896,0	0/1:65:27,38:27:951:38:1333:-100.701,0,-66.3341	0/1:43:27,16:27:968:16:567:-38.4164,0,-74.4931	1/1:37:0,37:0:0:37:1317:-118.83,-11.1381,0	1/1:262:2,260:2:68:260:9165:-818.37,-72.4122,0	1/1:77:0,77:0:0:77:2706:-243.785,-23.1793,0	1/1:44:0,44:0:0:44:1547:-139.518,-13.2453,0	1/1:114:0,114:0:0:114:3997:-359.922,-34.3174,0	0/1:87:54,33:54:1892:33:1166:-79.056,0,-144.366	0/1:68:47,21:47:1662:21:743:-46.7233,0,-129.396	1/1:100:0,99:0:0:99:3472:-312.332,-29.802,0	0/1:161:98,63:98:3435:63:2191:-148.975,0,-260.898	1/1:34:0,34:0:0:34:1196:-107.913,-10.235,0	1/1:72:0,72:0:0:72:2547:-229.482,-21.6742,0	1/1:61:0,61:0:0:61:2129:-191.875,-18.3628,0	0/1:166:36,130:36:1267:130:4614:-365.453,0,-64.3609	0/1:192:55,137:55:1937:137:4846:-378.499,0,-116.807	0/1:91:65,26:65:2301:26:914:-55.1809,0,-179.956	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	1/1:70:1,69:1:36:69:2399:-212.563,-17.4738,0
chr07	1430548	.	C	T	36964	PASS	AB=0.526354;ABP=27.6184;AC=49;AF=0.260638;AN=188;AO=2181;CIGAR=1X;DP=10322;DPB=10322;DPRA=0.729311;EPP=4678.39;EPPR=17214.8;GTI=1;LEN=1;MEANALT=1.10714;MQM=59.9807;MQMR=59.9739;NS=94;NUMALT=1;ODDS=20.6012;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77742;QR=290014;RO=8133;RPL=2174;RPP=4678.39;RPPR=17214.8;RPR=7;RUN=1;SAF=0;SAP=4738.99;SAR=2181;SRF=2;SRP=17646.2;SRR=8131;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	0/1:108:55,53:55:1964:53:1892:-138.047,0,-144.524	0/1:50:25,25:25:882:25:896:-65.9089,0,-64.645	0/1:155:62,92:62:2211:92:3281:-248.792,0,-152.536	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:44:43,0:43:1540:0:0:0,-12.9443,-138.602	0/1:102:58,44:58:2076:44:1540:-108.148,0,-156.405	0/1:86:58,28:58:2080:28:981:-62.7125,0,-161.582	0/0:86:85,0:85:3036:0:0:0,-25.5875,-273.111	0/1:74:34,40:34:1224:40:1432:-106.901,0,-88.1908	0/0:162:162,0:162:5799:0:0:0,-48.7669,-522.023	0/1:86:31,55:31:1099:55:1976:-152.226,0,-73.3309	0/1:68:19,49:19:676:49:1748:-137.134,0,-40.698	0/1:84:31,53:31:1095:53:1888:-144.912,0,-73.5726	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/1:78:31,47:31:1086:47:1680:-128.007,0,-74.5672	0/1:80:29,51:29:1027:51:1824:-140.359,0,-68.6598	0/1:77:25,52:25:896:52:1863:-144.769,0,-57.781	0/0:143:143,0:143:5099:0:0:0,-43.0473,-459.052	0/0:102:102,0:102:3656:0:0:0,-30.7051,-329.242	0/0:88:88,0:88:3135:0:0:0,-26.4906,-282.376	0/1:38:12,26:12:432:26:932:-72.7597,0,-27.7821	0/1:60:32,28:32:1152:28:1000:-72.2536,0,-85.9283	0/1:83:50,33:50:1779:33:1176:-81.1623,0,-135.407	0/1:74:32,42:32:1148:42:1496:-112.658,0,-81.3536	0/0:148:148,0:148:5287:0:0:0,-44.5524,-475.966	0/0:167:167,0:167:5960:0:0:0,-50.272,-536.507	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:120:67,53:67:2388:53:1874:-132.811,0,-179.054	0/1:96:53,43:53:1896:43:1536:-109.634,0,-142.019	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.638	0/0:159:158,1:158:5638:1:36:0,-44.2655,-503.942	0/0:342:342,0:342:12181:0:0:0,-102.952,-1096.14	0/0:855:855,0:855:30438:0:0:0,-257.381,-2738.41	0/0:533:533,0:533:19052:0:0:0,-160.449,-1714.24	0/0:145:140,4:140:5000:4:144:0,-30.3945,-436.835	0/1:189:72,117:72:2572:117:4188:-320.205,0,-174.835	0/1:72:46,26:46:1631:26:928:-62.1641,0,-125.403	0/1:153:115,37:115:4059:37:1313:-72.4511,0,-319.48	0/0:79:79,0:79:2813:0:0:0,-23.7814,-253.408	0/1:88:44,44:44:1576:44:1576:-115.641,0,-115.641	0/1:58:36,22:36:1275:22:792:-54.1459,0,-97.5925	0/1:51:27,24:27:964:24:852:-61.6479,0,-71.7241	0/1:66:10,56:10:356:56:2012:-161.485,0,-12.5133	0/1:58:14,44:14:504:44:1576:-124.672,0,-28.2384	0/0:92:92,0:92:3278:0:0:0,-27.6948,-295.24	0/0:96:96,0:96:3419:0:0:0,-28.8989,-307.925	0/0:166:166,0:166:5887:0:0:0,-49.971,-529.943	0/1:86:32,53:32:1144:53:1869:-142.628,0,-77.4106	0/1:76:34,42:34:1211:42:1509:-113.226,0,-86.4172	0/1:87:37,50:37:1328:50:1779:-134.203,0,-93.6317	0/0:476:476,0:476:16990:0:0:0,-143.29,-1528.61	0/0:67:67,0:67:2392:0:0:0,-20.169,-215.537	0/0:36:36,0:36:1283:0:0:0,-10.8371,-115.773	0/0:234:225,9:225:7988:9:310:0,-42.2076,-690.713	0/1:98:44,53:44:1576:53:1869:-138.928,0,-112.572	0/1:46:16,30:16:576:30:1060:-81.8639,0,-38.3276	0/0:253:249,3:249:8867:3:108:0,-66.1143,-787.805	0/0:170:170,0:170:6080:0:0:0,-51.1751,-547.303	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/0:65:64,1:64:2284:1:36:0,-15.9687,-202.224	0/0:68:64,4:64:2284:4:129:0,-8.54238,-193.894	0/1:119:32,87:32:1125:87:3075:-241.156,0,-65.7335	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.52	0/1:48:11,37:11:392:37:1328:-105.373,0,-21.1706	0/0:61:61,0:61:2171:0:0:0,-18.3628,-195.656	0/1:89:45,44:45:1604:44:1576:-115.34,0,-117.858	0/1:56:19,37:19:684:37:1324:-102.604,0,-45.0326	0/1:109:82,27:82:2915:27:957:-53.6316,0,-229.774	0/0:67:67,0:67:2378:0:0:0,-20.169,-214.277	0/1:61:19,42:19:680:42:1500:-116.932,0,-43.1663	0/0:118:118,0:118:4201:0:0:0,-35.5215,-378.268	0/1:58:29,29:29:1040:29:1036:-76.0942,0,-76.4546	0/1:27:3,24:3:104:24:841:-67.8786,0,-1.575	0/0:88:88,0:88:3129:0:0:0,-26.4906,-281.835	0/1:66:39,27:39:1392:27:968:-67.5612,0,-105.711	0/1:41:16,25:16:576:25:896:-68.6181,0,-39.8328	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/0:264:262,2:262:9321:2:72:0,-72.6352,-832.005	0/0:75:75,0:75:2675:0:0:0,-22.5772,-240.995	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:113:113,0:113:4013:0:0:0,-34.0164,-361.36	0/1:88:34,54:34:1216:54:1928:-147.306,0,-83.2559	0/1:67:21,46:21:756:46:1643:-127.99,0,-48.1982	0/0:99:99,0:99:3527:0:0:0,-29.802,-317.639	0/1:160:61,99:61:2192:99:3536:-270.285,0,-149.251	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/0:71:71,0:71:2528:0:0:0,-21.3731,-227.769	0/0:62:62,0:62:2220:0:0:0,-18.6639,-200.064	0/1:159:123,36:123:4382:36:1288:-68.3598,0,-346.691	0/1:189:137,52:137:4869:52:1872:-111.864,0,-381.468	0/1:95:26,69:26:915:69:2449:-192.066,0,-54.0677	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:71:70,1:70:2516:1:32:0,-18.1738,-223.492
chr07	1611203	.	G	A	83483.4	PASS	AB=0.443332;ABP=117.204;AC=133;AF=0.707447;AN=188;AO=4142;CIGAR=1X;DP=6433;DPB=6433;DPRA=11.5179;EPP=8824.37;EPPR=4733.28;GTI=4;LEN=1;MEANALT=1.02151;MQM=59.9628;MQMR=59.9904;NS=94;NUMALT=1;ODDS=0.0421287;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=147867;QR=81825;RO=2289;RPL=4122;RPP=8824.37;RPPR=4733.28;RPR=20;RUN=1;SAF=0;SAP=8997.25;SAR=4142;SRF=0;SRP=4973.51;SRR=2289;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:41,17:41:1472:17:612:-37.9503,0,-115.316	0/1:36:25,11:25:868:11:396:-25.1457,0,-67.5959	0/1:82:38,44:38:1364:44:1584:-118.167,0,-98.3763	0/1:187:112,75:112:3998:75:2681:-185.241,0,-303.717	1/1:49:0,49:0:0:49:1749:-157.694,-14.7505,0	1/1:29:0,29:0:0:29:1025:-92.5607,-8.72987,0	0/1:119:73,46:73:2616:46:1644:-112.426,0,-199.865	0/1:109:58,51:58:2072:51:1815:-130.817,0,-153.938	1/1:63:0,63:0:0:63:2236:-201.504,-18.9649,0	0/1:69:42,27:42:1495:27:957:-65.6728,0,-114.073	1/1:55:0,55:0:0:55:1966:-176.588,-16.5567,0	0/1:78:38,40:38:1359:40:1432:-105.697,0,-99.1295	0/1:81:38,43:38:1345:43:1540:-114.51,0,-96.9647	0/1:72:44,28:44:1584:28:1000:-68.6412,0,-121.177	1/1:43:0,43:0:0:43:1548:-139.613,-12.9443,0	0/1:69:48,21:48:1720:21:744:-46.5133,0,-134.314	0/1:22:14,8:14:500:8:273:-18.2775,0,-38.7135	0/1:32:20,12:20:716:12:420:-28.5005,0,-55.1348	1/1:32:0,31:0:0:31:1104:-99.3076,-9.33193,0	0/1:115:59,56:59:2120:56:2016:-147.094,0,-156.45	1/1:129:0,129:0:0:129:4588:-413.081,-38.8329,0	0/1:75:48,27:48:1724:27:972:-65.2207,0,-132.868	0/1:78:49,29:49:1760:29:1032:-69.7131,0,-135.204	0/1:40:23,17:23:824:17:612:-43.3722,0,-62.4421	0/1:77:45,32:45:1608:32:1152:-80.8108,0,-121.831	1/1:138:0,138:0:0:138:4907:-441.779,-41.5421,0	1/1:120:0,120:0:0:120:4301:-387.26,-36.1236,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:243:114,129:114:4076:129:4561:-337.502,0,-293.877	0/1:49:29,20:29:1028:20:720:-50.3783,0,-78.0826	1/1:54:0,54:0:0:54:1940:-174.876,-16.2556,0	1/1:11:0,11:0:0:11:381:-34.6206,-3.31133,0	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	0/1:24:17,7:17:608:7:252:-15.8042,0,-47.8273	0/1:142:85,57:85:3039:57:2008:-138.245,0,-230.993	0/1:44:29,15:29:1027:15:536:-35.3295,0,-79.4969	0/1:67:34,33:34:1224:33:1188:-87.0596,0,-90.298	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:146:79,67:79:2844:67:2398:-172.126,0,-212.247	0/1:39:29,10:29:1036:10:349:-20.0046,0,-81.8137	0/1:105:60,45:60:2140:45:1616:-114.121,0,-161.223	0/1:47:24,23:24:860:23:819:-59.8832,0,-63.5734	0/1:34:21,13:21:752:13:468:-32.2246,0,-57.7712	1/1:75:0,75:0:0:75:2647:-238.473,-22.5773,0	1/1:70:0,70:0:0:70:2489:-224.262,-21.0721,0	1/1:178:1,177:1:36:177:6348:-567.81,-49.9851,0	0/1:70:36,34:36:1288:34:1220:-89.0347,0,-95.1515	0/1:137:70,67:70:2480:67:2404:-175.375,0,-182.211	0/1:123:67,56:67:2399:56:2012:-144.324,0,-179.139	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	1/1:66:0,66:0:0:66:2357:-212.387,-19.868,0	1/1:44:0,44:0:0:44:1539:-138.794,-13.2453,0	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:82:34,48:34:1220:48:1720:-130.38,0,-85.4223	0/1:30:19,11:19:684:11:396:-26.9518,0,-52.8594	0/1:10:5,5:5:171:5:180:-13.5418,0,-12.7152	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:87:0,87:0:0:87:3117:-280.755,-26.1896,0	1/1:66:0,66:0:0:66:2372:-213.738,-19.868,0	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:126:59,67:59:2108:67:2408:-179.046,0,-152.059	1/1:88:0,88:0:0:88:3141:-282.915,-26.4906,0	0/1:84:39,45:39:1391:45:1605:-119.452,0,-100.202	1/1:42:0,42:0:0:42:1489:-134.303,-12.6433,0	0/1:72:25,47:25:888:47:1684:-130.173,0,-58.5649	0/1:112:78,34:78:2795:34:1205:-75.0385,0,-218.074	0/1:56:35,21:35:1256:21:756:-51.5095,0,-96.4876	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:32:18,14:18:648:14:500:-35.7032,0,-49.0189	1/1:17:0,17:0:0:17:597:-54.0561,-5.11751,0	0/1:91:53,38:53:1896:38:1334:-92.9621,0,-143.524	0/1:75:43,32:43:1548:32:1146:-80.8426,0,-117.036	1/1:66:0,66:0:0:66:2334:-210.317,-19.868,0	0/1:137:63,73:63:2244:73:2616:-194.388,0,-160.924	0/1:104:54,50:54:1931:50:1777:-128.86,0,-142.759	1/1:101:1,100:1:32:100:3573:-318.578,-27.2047,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:96:0,96:0:0:96:3429:-308.819,-28.8989,0	1/1:78:1,77:1:36:77:2751:-244.227,-19.8821,0	1/1:114:0,114:0:0:114:4069:-366.397,-34.3174,0	0/1:38:23,15:23:813:15:540:-37.4974,0,-62.05	0/1:56:32,24:32:1144:24:855:-60.4125,0,-86.4118	1/1:23:0,23:0:0:23:815:-73.6714,-6.92369,0	0/1:96:55,41:55:1976:41:1465:-103.246,0,-149.216	1/1:26:1,25:1:36:25:900:-77.7227,-4.22851,0	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	1/1:47:0,47:0:0:47:1677:-151.216,-14.1484,0	0/1:56:30,26:30:1067:26:936:-67.7018,0,-79.4835	0/1:87:49,38:49:1739:38:1351:-95.7,0,-130.604	0/1:67:48,19:48:1716:19:684:-41.7213,0,-134.557	1/1:95:0,95:0:0:95:3387:-305.043,-28.5979,0	1/1:75:1,74:1:36:74:2656:-235.687,-18.979,0
chr07	1611218	.	T	C	82501.5	PASS	AB=0.449851;ABP=90.9991;AC=133;AF=0.707447;AN=188;AO=4138;CIGAR=1X;DP=6365;DPB=6365;DPRA=13.6774;EPP=8988.56;EPPR=4832.36;GTI=3;LEN=1;MEANALT=1.03226;MQM=59.9577;MQMR=59.9865;NS=94;NUMALT=1;ODDS=0.367079;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=147625;QR=78758;RO=2224;RPL=4138;RPP=8988.56;RPPR=4832.36;RPR=0;RUN=1;SAF=0;SAP=8988.56;SAR=4138;SRF=0;SRP=4832.36;SRR=2224;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:41,17:41:1452:17:608:-37.5909,0,-113.516	0/1:34:23,11:23:809:11:396:-25.7477,0,-62.8933	0/1:79:35,44:35:1237:44:1572:-117.99,0,-87.8509	0/1:186:110,76:110:3944:76:2696:-186.894,0,-299.16	1/1:49:0,49:0:0:49:1748:-157.603,-14.7505,0	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	0/1:116:69,47:69:2461:47:1660:-114.764,0,-186.823	0/1:111:59,52:59:2120:52:1842:-132.633,0,-157.654	1/1:63:0,63:0:0:63:2240:-201.864,-18.9649,0	0/1:69:43,26:43:1494:26:928:-63.0672,0,-113.978	1/1:55:0,55:0:0:55:1945:-175.194,-16.5567,0	0/1:77:38,39:38:1355:39:1386:-101.858,0,-99.0704	0/1:79:34,45:34:1201:45:1616:-121.949,0,-84.6123	0/1:67:40,27:40:1410:27:968:-67.2684,0,-107.024	1/1:46:0,46:0:0:46:1646:-148.428,-13.8474,0	0/1:72:49,23:49:1744:23:820:-52.4484,0,-135.57	0/1:21:13,8:13:453:8:288:-19.9458,0,-34.778	0/1:31:19,12:19:668:12:432:-29.8893,0,-51.1137	1/1:32:0,32:0:0:32:1152:-103.987,-9.63296,0	0/1:113:57,56:57:2006:56:1999:-146.167,0,-146.794	1/1:129:0,129:0:0:129:4589:-413.176,-38.8329,0	0/1:72:45,27:45:1608:27:968:-65.7632,0,-123.336	0/1:77:48,29:48:1697:29:1040:-70.7351,0,-129.835	0/1:41:23,18:23:824:18:624:-44.1392,0,-62.1411	0/1:76:45,31:45:1601:31:1112:-77.5131,0,-121.5	1/1:139:0,139:0:0:139:4939:-444.66,-41.8432,0	1/1:123:0,123:0:0:123:4400:-396.169,-37.0267,0	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	0/1:238:111,127:111:3904:127:4518:-335.141,0,-279.908	0/1:46:26,20:26:905:20:720:-51.2814,0,-67.9154	1/1:55:0,55:0:0:55:1959:-176.584,-16.5567,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:9:0,8:0:0:8:288:-25.9076,-2.40824,0	0/1:24:17,7:17:574:7:252:-15.8042,0,-44.7513	0/1:133:79,54:79:2809:54:1932:-134.12,0,-213.012	0/1:43:27,16:27:949:16:572:-38.8691,0,-72.7785	0/1:69:35,34:35:1232:34:1220:-89.3357,0,-90.4102	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:143:75,67:75:2627:67:2381:-171.44,0,-193.569	0/1:37:27,10:27:956:10:356:-21.2431,0,-75.2176	0/1:103:59,44:59:2063:44:1573:-110.853,0,-154.893	0/1:44:23,21:23:824:21:752:-54.7609,0,-61.238	0/1:34:19,15:19:672:15:540:-38.7015,0,-50.5718	1/1:74:0,74:0:0:74:2640:-237.847,-22.2762,0	1/1:69:0,69:0:0:69:2460:-221.655,-20.7711,0	1/1:180:1,179:1:36:179:6366:-569.432,-50.5871,0	0/1:67:33,34:33:1169:34:1209:-88.9451,0,-85.3463	0/1:137:71,66:71:2517:66:2353:-170.786,0,-185.54	0/1:128:71,57:71:2525:57:2029:-144.346,0,-188.966	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	1/1:65:0,65:0:0:65:2307:-207.891,-19.567,0	1/1:43:0,43:0:0:43:1540:-138.893,-12.9443,0	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:84:35,49:35:1256:49:1735:-131.127,0,-88.0588	0/1:28:16,12:16:561:12:420:-29.7052,0,-42.3883	0/1:10:5,5:5:176:5:180:-13.5418,0,-13.1747	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:88:0,88:0:0:88:3143:-283.095,-26.4906,0	1/1:65:0,65:0:0:65:2315:-208.61,-19.567,0	0/1:10:5,5:5:176:5:180:-13.5418,0,-13.1747	0/1:125:59,66:59:2074:66:2368:-175.749,0,-149.299	1/1:90:0,89:0:0:89:3188:-286.783,-26.7917,0	0/1:83:38,45:38:1345:45:1593:-118.673,0,-96.3627	1/1:40:0,40:0:0:40:1428:-128.818,-12.0412,0	0/1:73:25,48:25:900:48:1708:-132.029,0,-59.3458	0/1:110:77,33:77:2703:33:1188:-74.1153,0,-210.398	0/1:53:32,21:32:1118:21:756:-52.4126,0,-84.9689	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	0/1:29:16,13:16:576:13:464:-33.3676,0,-43.4451	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	0/1:94:54,40:54:1905:40:1428:-100.521,0,-143.429	0/1:75:43,32:43:1525:32:1152:-81.3067,0,-114.964	1/1:69:0,69:0:0:69:2452:-220.933,-20.7711,0	0/1:135:62,73:62:2212:73:2620:-195.408,0,-158.706	0/1:93:46,47:46:1628:47:1688:-124.166,0,-118.805	1/1:101:1,100:1:36:100:3572:-318.09,-26.8058,0	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	1/1:93:0,93:0:0:93:3340:-300.813,-27.9958,0	1/1:75:0,75:0:0:75:2662:-239.818,-22.5773,0	1/1:115:0,115:0:0:115:4120:-370.984,-34.6185,0	0/1:38:23,15:23:809:15:536:-37.1357,0,-61.6892	0/1:56:32,24:32:1144:24:849:-59.871,0,-86.4118	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	0/1:92:53,39:53:1896:39:1388:-97.5242,0,-143.223	1/1:26:0,26:0:0:26:922:-83.2971,-7.82678,0	1/1:48:0,48:0:0:48:1701:-153.359,-14.4494,0	1/1:48:0,48:0:0:48:1694:-152.745,-14.4494,0	0/1:58:31,27:31:1104:27:964:-69.6171,0,-82.2109	0/1:84:46,38:46:1644:38:1346:-96.1522,0,-122.962	0/1:68:50,18:50:1768:18:648:-38.1818,0,-138.933	1/1:94:0,94:0:0:94:3368:-303.334,-28.2968,0	1/1:75:2,73:2:68:73:2620:-229.59,-16.1195,0
chr07	1611227	.	G	T	40178.6	PASS	AB=0.559602;ABP=130.104;AC=55;AF=0.292553;AN=188;AO=2316;CIGAR=1X;DP=6468;DPB=6468;DPRA=1.42863;EPP=5032.14;EPPR=9008.11;GTI=4;LEN=1;MEANALT=1.03448;MQM=59.9788;MQMR=59.9585;NS=94;NUMALT=1;ODDS=0.464295;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82850;QR=148453;RO=4147;RPL=2316;RPP=5032.14;RPPR=9008.11;RPR=0;RUN=1;SAF=0;SAP=5032.14;SAR=2316;SRF=0;SRP=9008.11;SRR=4147;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:17,41:17:612:41:1472:-115.316,0,-37.9503	0/1:37:11,26:11:396:26:932:-72.9545,0,-24.8446	0/1:82:43,39:43:1536:39:1384:-100.172,0,-113.849	0/1:187:75,112:75:2672:112:4006:-304.436,0,-184.434	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.847	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/1:122:48,74:48:1712:74:2633:-200.49,0,-117.64	0/1:112:52,60:52:1860:60:2137:-158.881,0,-133.858	0/0:64:64,0:64:2288:0:0:0,-19.2659,-206.182	0/1:70:27,43:27:972:43:1548:-118.541,0,-66.7258	0/0:52:52,0:52:1864:0:0:0,-15.6536,-167.412	0/1:77:40,37:40:1428:37:1324:-96.2828,0,-105.638	0/1:83:46,37:46:1652:37:1328:-94.8367,0,-123.983	0/1:72:28,44:28:1004:44:1578:-120.637,0,-69.0017	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/1:71:23,48:23:808:48:1728:-134.432,0,-51.667	0/1:22:8,14:8:288:14:504:-39.0754,0,-19.6447	0/1:32:12,20:12:428:20:720:-55.4958,0,-29.2258	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.505	0/1:116:55,61:55:1976:61:2192:-162.626,0,-143.195	0/0:130:130,0:130:4648:0:0:0,-39.1339,-418.48	0/1:74:27,47:27:972:47:1692:-130.291,0,-65.5217	0/1:76:27,49:27:968:49:1764:-136.165,0,-64.5591	0/1:41:18,23:18:640:23:809:-60.7861,0,-45.5871	0/1:77:32,45:32:1148:45:1620:-122.911,0,-80.4505	0/0:138:138,0:138:4924:0:0:0,-41.5421,-443.313	0/0:123:123,0:123:4404:0:0:0,-37.0267,-396.528	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/1:245:129,116:129:4625:116:4120:-297.233,0,-342.658	0/1:48:20,28:20:720:28:993:-75.2331,0,-50.6793	0/0:55:55,0:55:1972:0:0:0,-16.5566,-177.753	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:19:18,0:18:648:0:0:0,-5.41854,-58.434	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:25:7,18:7:252:18:648:-51.1261,0,-15.5032	0/1:140:55,85:55:1972:85:3060:-233.484,0,-135.611	0/1:45:16,29:16:572:29:1025:-79.0143,0,-38.2671	0/1:69:34,35:34:1220:35:1252:-92.214,0,-89.3357	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:147:66,81:66:2364:81:2881:-215.275,0,-168.767	0/1:40:11,29:11:388:29:1044:-82.2336,0,-23.2162	0/1:105:45,60:45:1612:60:2148:-161.893,0,-113.761	0/1:47:22,25:22:788:25:900:-67.1726,0,-57.0964	0/1:33:12,21:12:428:21:756:-58.4332,0,-28.9248	0/0:77:77,0:77:2760:0:0:0,-23.1793,-248.642	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/0:175:174,1:174:6216:1:36:0,-49.082,-555.94	0/1:70:35,35:35:1248:35:1260:-92.6334,0,-91.5528	0/1:137:65,72:65:2332:72:2580:-191.208,0,-168.898	0/1:126:56,70:56:2008:70:2520:-189.119,0,-143.064	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.78	0/0:45:44,1:44:1576:1:36:0,-9.94807,-138.447	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:81:46,35:46:1648:35:1260:-89.3221,0,-124.222	0/1:32:13,19:13:468:19:684:-52.2574,0,-32.8267	0/1:10:5,5:5:180:5:176:-13.1747,0,-13.5418	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:91:88,3:88:3160:3:108:0,-17.3186,-274.549	0/0:65:65,0:65:2320:0:0:0,-19.5669,-209.061	0/1:10:5,5:5:180:5:156:-11.3367,0,-13.5418	0/1:126:65,60:65:2332:60:2152:-155.998,0,-172.19	0/0:90:89,0:89:3188:0:0:0,-26.7917,-286.781	0/1:84:45,39:45:1608:39:1381:-99.3002,0,-119.724	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/1:73:48,25:48:1724:25:884:-57.9032,0,-133.47	0/1:113:33,80:33:1184:80:2876:-225.06,0,-72.8519	0/1:56:21,35:21:756:35:1252:-96.1274,0,-51.5095	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:31:13,18:13:464:18:644:-48.9587,0,-32.7656	0/0:18:18,0:18:640:0:0:0,-5.41854,-57.9293	0/1:93:39,54:39:1400:54:1929:-145.889,0,-98.3034	0/1:76:32,44:32:1148:44:1576:-119.253,0,-80.6454	0/0:68:67,0:67:2404:0:0:0,-20.169,-216.257	0/1:136:74,62:74:2656:62:2216:-158.764,0,-198.346	0/1:103:48,55:48:1720:55:1953:-145.036,0,-124.034	0/0:102:102,0:102:3672:0:0:0,-30.7051,-330.681	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:92:92,0:92:3304:0:0:0,-27.6948,-297.578	0/0:77:77,0:77:2760:0:0:0,-23.1793,-248.635	0/0:119:119,0:119:4248:0:0:0,-35.8226,-382.5	0/1:38:15,23:15:532:23:820:-62.6828,0,-36.7739	0/1:58:24,34:24:852:34:1220:-92.6471,0,-59.5406	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3611	0/1:94:39,54:39:1392:54:1929:-145.529,0,-97.2235	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.021	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/1:58:27,31:27:968:31:1112:-82.9316,0,-69.9776	0/1:87:38,49:38:1344:49:1760:-132.494,0,-95.0705	0/1:69:18,51:18:644:51:1808:-142.23,0,-37.5195	0/0:97:97,0:97:3476:0:0:0,-29.1999,-313.049	0/0:74:73,1:73:2604:1:36:0,-18.6779,-231.011
chr07	1632307	.	A	T	235558	PASS	AB=0.466584;ABP=96.7606;AC=134;AF=0.712766;AN=188;AO=9959;CIGAR=1X;DP=15125;DPB=15125;DPRA=0;EPP=21628.7;EPPR=11216.5;GTI=0;LEN=1;MEANALT=1.02128;MQM=46.8306;MQMR=57.5703;NS=94;NUMALT=1;ODDS=8.30072;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=352935;QR=180034;RO=5164;RPL=4777;RPP=38.7745;RPPR=4.42487;RPR=5182;RUN=1;SAF=4777;SAP=38.7745;SAR=5182;SRF=2611;SRP=4.42487;SRR=2553;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:101:34,67:34:1150:67:2370:-148.742,0,-72.5796	0/1:270:153,117:153:5387:117:4151:-270.768,0,-403.389	0/1:298:172,126:172:6028:126:4487:-257.211,0,-452.219	0/1:386:232,154:232:8073:154:5446:-338.384,0,-609.946	1/1:102:0,102:0:0:102:3614:-297.695,-30.7051,0	1/1:71:0,71:0:0:71:2503:-211.34,-21.3731,0	0/1:185:105,80:105:3613:80:2836:-187.669,0,-269.333	0/1:380:233,146:233:8153:146:5183:-314.231,0,-618.942	1/1:169:1,168:1:36:168:5910:-474.485,-47.2795,0	0/1:180:94,86:94:3270:86:3044:-206.671,0,-240.293	1/1:94:0,94:0:0:94:3335:-277.08,-28.2968,0	0/1:122:53,69:53:1824:69:2421:-157.522,0,-126.844	0/1:151:71,80:71:2491:80:2863:-186.705,0,-178.678	0/1:105:55,50:55:1875:50:1759:-113.857,0,-137.267	0/1:138:68,70:68:2365:70:2491:-169.559,0,-171.04	0/1:119:66,53:66:2241:53:1887:-115.755,0,-166.043	0/1:92:37,55:37:1280:55:1963:-139.833,0,-87.5854	0/1:117:41,76:41:1455:76:2698:-199.942,0,-95.8941	1/1:42:0,42:0:0:42:1471:-119.323,-12.6433,0	0/1:419:186,233:186:6486:233:8262:-583.816,0,-456.456	1/1:286:0,286:0:0:286:10123:-822.642,-86.0946,0	0/1:220:165,54:165:5778:54:1904:-99.3965,0,-453.691	0/1:169:111,58:111:3890:58:2053:-114.942,0,-298.045	0/1:146:78,68:78:2704:68:2431:-149.817,0,-198.895	0/1:140:94,46:94:3256:46:1639:-87.277,0,-250.111	1/1:380:0,380:0:0:380:13544:-1161.86,-114.391,0	1/1:281:0,281:0:0:281:9900:-794.012,-84.5894,0	1/1:71:0,71:0:0:71:2527:-216.574,-21.3731,0	0/1:378:152,226:152:5350:226:7995:-576.801,0,-367.801	0/1:238:127,111:127:4411:111:3949:-257.397,0,-323.574	1/1:122:1,121:1:36:121:4278:-356.359,-33.1291,0	1/1:78:0,78:0:0:78:2791:-250.94,-23.4803,0	1/1:64:0,64:0:0:64:2243:-194.891,-19.2659,0	1/1:82:0,82:0:0:82:2932:-259.725,-24.6845,0	1/1:59:0,59:0:0:59:2090:-185.86,-17.7608,0	0/1:47:13,34:13:456:34:1204:-87.2595,0,-27.1939	0/1:308:145,163:145:5078:163:5787:-404.901,0,-364.298	0/1:232:146,86:146:5115:86:3045:-185.492,0,-390.245	0/1:56:23,33:23:777:33:1175:-86.0589,0,-53.1339	0/1:25:3,22:3:104:22:768:-61.9146,0,-2.16875	0/1:311:189,122:189:6586:122:4338:-275.669,0,-498.78	0/1:41:19,22:19:654:22:767:-52.0376,0,-46.6973	0/1:303:199,104:199:6841:104:3708:-214.772,0,-523.351	0/1:120:57,63:57:1994:63:2249:-155.248,0,-143.537	0/1:108:50,58:50:1731:58:2028:-141.824,0,-123.49	1/1:101:0,101:0:0:101:3577:-298.883,-30.404,0	1/1:173:0,173:0:0:173:6189:-512.997,-52.0782,0	1/1:215:0,215:0:0:215:7602:-652.805,-64.7215,0	0/1:106:52,54:52:1832:54:1924:-132.37,0,-133.228	0/1:268:141,127:141:4956:127:4507:-301.761,0,-365.227	0/1:246:135,111:135:4732:111:3906:-266.272,0,-351.85	1/1:83:0,83:0:0:83:2956:-264.53,-24.9855,0	1/1:125:0,125:0:0:125:4459:-354.347,-37.6288,0	1/1:121:1,120:1:36:120:4241:-355.836,-32.8268,0	0/1:50:11,39:11:380:39:1387:-108.819,0,-19.4764	0/1:249:99,150:99:3409:150:5327:-355.153,0,-230.864	0/1:43:21,22:21:732:22:784:-49.031,0,-53.1773	0/1:40:7,33:7:252:33:1147:-88.7044,0,-10.9865	1/1:85:0,85:0:0:85:2999:-264.146,-25.5876,0	1/1:132:0,132:0:0:132:4645:-374.393,-39.736,0	1/1:76:1,75:1:36:75:2660:-223.807,-19.2817,0	0/1:40:6,34:6:212:34:1216:-96.593,0,-7.3836	1/1:232:0,232:0:0:232:8252:-724.781,-69.839,0	1/1:233:3,230:3:108:230:8102:-690.279,-60.0648,0	0/1:125:74,51:74:2596:51:1797:-109.588,0,-196.199	1/1:115:0,115:0:0:115:4080:-340.483,-34.6185,0	0/1:259:168,91:168:5800:91:3231:-191.736,0,-443.168	0/1:396:282,114:282:9879:114:4064:-213.652,0,-768.924	0/1:51:21,30:21:720:30:1068:-71.5937,0,-49.3093	1/1:111:1,110:1:36:110:3922:-322.481,-29.8161,0	0/1:115:71,44:71:2511:44:1549:-101.437,0,-191.33	1/1:51:0,51:0:0:51:1807:-150.509,-15.3525,0	0/1:150:90,60:90:3092:60:2128:-126.123,0,-232.65	0/1:210:95,115:95:3321:115:4100:-268.374,0,-234.912	1/1:146:0,146:0:0:146:5155:-437.248,-43.9504,0	0/1:316:132,184:132:4625:184:6503:-459.736,0,-321.193	0/1:301:170,131:170:6016:131:4684:-282.437,0,-450.342	1/1:164:0,164:0:0:164:5776:-491.704,-49.3689,0	1/1:61:0,61:0:0:61:2171:-195.497,-18.3628,0	1/1:266:0,266:0:0:266:9439:-807.579,-80.074,0	1/1:282:0,282:0:0:282:9996:-800.454,-84.8905,0	1/1:263:0,263:0:0:263:9288:-785.176,-79.1709,0	0/1:124:72,52:72:2539:52:1847:-122.437,0,-191.409	0/1:171:81,90:81:2813:90:3152:-212.673,0,-201.137	1/1:114:0,114:0:0:114:4012:-342.219,-34.3174,0	0/1:191:98,93:98:3450:93:3276:-224.312,0,-252.983	1/1:37:0,37:0:0:37:1311:-111.798,-11.1381,0	1/1:82:0,82:0:0:82:2889:-238.16,-24.6845,0	1/1:90:0,90:0:0:90:3190:-257.133,-27.0927,0	0/1:58:23,35:23:785:35:1243:-85.0569,0,-53.43	0/1:141:62,79:62:2110:79:2770:-186.016,0,-147.177	0/1:111:72,39:72:2504:39:1388:-85.8047,0,-191.761	1/1:88:1,87:1:32:87:3098:-254.833,-23.2913,0	1/1:112:1,111:1:32:111:3959:-329.913,-30.5167,0
chr07	1720816	.	CAGTTGCTGC	TAGTCACTGT,CAGTCACTGT	491304	PASS	AB=0.405675,0.582439;ABP=1010.75,772.767;AC=136,52;AF=0.723404,0.276596;AN=188;AO=15813,7607;CIGAR=1X3M2X3M1X,4M2X3M1X;DP=23714;DPB=23714.7;DPRA=0,1.63451;EPP=34184.3,16460.7;EPPR=0;GTI=2;LEN=10,10;MEANALT=4.18085,4.81967;MQM=59.5079,59.9423;MQMR=0;NS=94;NUMALT=2;ODDS=0.292066;PAIRED=0,0;PAIREDR=0;PAO=6,0.5;PQA=216,18;PQR=18;PRO=0.5;QA=556649,267681;QR=0;RO=0;RPL=15795,7600;RPP=34184.3,16460.7;RPPR=0;RPR=18,7;RUN=1,1;SAF=15813,7607;SAP=34340.5,16521.4;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:11:0,9,2:0:0:9,2:316,72:-31.6251,-6.23466,-3.52539,-25.7479,0,-25.1458	1/2:175:0,53,120:0:0:53,120:1862,4203:-493.455,-342.04,-326.086,-151.473,0,-115.35	1/2:103:0,39,61:0:0:39,61:1333,2137:-282.041,-173.902,-162.162,-108.153,0,-89.7903	1/2:203:0,67,136:0:0:67,136:2360,4832:-586.233,-394.099,-373.93,-192.487,0,-151.547	1/1:69:0,69,0:0:0:69,0:2440,0:-219.731,-20.7711,0,-219.731,-20.7711,-219.731	1/1:56:0,53,2:0:0:53,2:1879,70:-169.067,-15.9546,0,-163.372,-10.1652,-162.77	1/2:154:0,65,87:0:0:65,87:2292,3097:-438.991,-252.425,-232.858,-186.575,0,-160.385	1/2:189:0,81,105:0:0:81,105:2869,3616:-526.989,-293.419,-269.036,-233.567,0,-201.959	1/1:58:0,58,0:0:0:58,0:2047,0:-184.459,-17.4597,0,-184.459,-17.4597,-184.459	1/2:154:0,58,95:0:0:58,95:2028,3363:-438.897,-273.932,-256.472,-164.957,0,-136.359	1/1:455:0,450,0:0:0:450,0:15889,0:-1428.77,-135.464,0,-1428.77,-135.464,-1428.77	1/2:74:0,32,41:0:0:32,41:1137,1429:-208.91,-116.309,-106.676,-92.6998,0,-80.3575	1/1:53:0,53,0:0:0:53,0:1860,0:-167.643,-15.9546,0,-167.643,-15.9546,-167.643	1/2:73:0,22,50:0:0:22,50:774,1744:-203.642,-141.829,-135.206,-61.8008,0,-46.7493	1/2:54:0,23,30:0:0:23,30:817,1066:-153.484,-86.9105,-79.9868,-66.6171,0,-57.5862	1/2:74:0,40,33:0:0:40,33:1404,1156:-208.334,-94.0717,-82.0305,-114.273,0,-104.339	1/2:82:0,37,43:0:0:37,43:1307,1516:-229.921,-123.481,-112.343,-106.485,0,-93.5406	1/2:56:0,25,29:0:0:25,29:889,1036:-156.953,-84.5118,-76.9861,-72.4832,0,-63.7533	1/1:234:0,228,0:0:0:228,0:8010,0:-720.217,-68.6348,0,-720.217,-68.6348,-720.217	1/2:225:0,80,144:0:0:80,144:2824,5096:-644.955,-415.082,-390.999,-229.876,0,-186.528	1/1:90:0,88,0:0:0:88,0:3095,0:-278.398,-26.4906,0,-278.398,-26.4906,-278.398	1/2:119:0,26,87:0:0:26,87:919,3041:-322.226,-247.378,-239.552,-74.844,0,-48.6544	1/2:57:0,27,30:0:0:27,30:953,1068:-164.634,-87.4017,-79.2739,-77.5855,0,-68.5546	1/2:35:0,16,19:0:0:16,19:554,648:-97.9309,-52.9176,-48.1012,-45.357,0,-39.6374	1/2:108:0,44,63:0:0:44,63:1549,2218:-306.622,-180.639,-167.394,-126.052,0,-107.087	1/1:233:0,228,0:0:0:228,0:8011,0:-720.675,-68.6348,0,-720.675,-68.6348,-720.675	1/1:157:0,156,0:0:0:156,0:5489,0:-493.577,-46.9607,0,-493.577,-46.9607,-493.577	1/1:22:0,22,0:0:0:22,0:778,0:-70.3431,-6.62266,0,-70.3431,-6.62266,-70.3431	1/2:187:0,75,111:0:0:75,111:2653,3902:-533.542,-317.685,-295.107,-215.929,0,-182.515	1/1:122:0,122,0:0:0:122,0:4293,0:-386.55,-36.7257,0,-386.55,-36.7257,-386.55	1/1:114:0,109,0:0:0:109,0:3841,0:-345.47,-32.8123,0,-345.47,-32.8123,-345.47	1/1:852:0,845,1:0:0:845,1:29724,36:-2672.74,-254.37,0,-2669.8,-251.426,-2669.5	1/1:665:0,654,2:0:0:654,2:22925,72:-2061.96,-196.874,0,-2056.09,-190.986,-2055.48	1/1:872:0,860,0:0:0:860,0:30140,0:-2710.19,-258.886,0,-2710.19,-258.886,-2710.19	1/1:1310:0,1296,1:0:0:1296,1:45515,36:-4093.52,-390.135,0,-4090.58,-387.195,-4090.28	1/2:1705:0,732,958:0:0:732,958:25731,33660:-4832.79,-2739.65,-2519.3,-2093.18,0,-1804.79	1/2:140:0,66,73:0:0:66,73:2315,2568:-397.425,-209.034,-189.166,-188.382,0,-166.407	1/2:185:0,67,114:0:0:67,114:2335,4045:-519.466,-329.597,-309.428,-189.894,0,-155.576	1/2:484:0,232,248:0:0:232,248:8228,8704:-1378.64,-708.393,-638.554,-670.278,0,-595.623	1/2:805:0,289,500:0:0:289,500:10158,17638:-2262.9,-1436.21,-1349.22,-826.712,0,-676.197	1/2:151:0,44,105:0:0:44,105:1562,3708:-429.297,-302.032,-288.786,-127.331,0,-95.7231	1/2:252:0,110,142:0:0:110,142:3889,4978:-722.156,-405.431,-372.318,-317.077,0,-274.331	1/2:122:0,40,80:0:0:40,80:1403,2816:-343.392,-229.227,-217.185,-114.162,0,-90.0795	1/2:56:0,23,33:0:0:23,33:813,1166:-161.526,-95.3132,-88.3895,-66.5661,0,-56.6321	1/2:47:0,25,21:0:0:25,21:884,746:-132.771,-60.7833,-53.2576,-71.982,0,-65.6604	1/1:65:0,65,0:0:0:65,0:2299,0:-207.153,-19.567,0,-207.153,-19.567,-207.153	1/1:85:0,82,0:0:0:82,0:2891,0:-260.07,-24.6845,0,-260.07,-24.6845,-260.07	1/1:83:0,80,1:0:0:80,1:2802,36:-252.093,-24.0824,0,-249.155,-21.13,-248.854	1/2:141:0,75,64:0:0:75,64:2669,2236:-399.399,-181.921,-159.344,-217.514,0,-198.248	1/2:150:0,84,66:0:0:84,66:2967,2335:-432.16,-190.543,-165.256,-241.97,0,-222.103	1/2:133:0,56,76:0:0:56,76:1971,2663:-376.937,-216.675,-199.817,-160.256,0,-137.377	1/1:960:0,943,0:0:0:943,0:33271,0:-2992.25,-283.871,0,-2992.25,-283.871,-2992.25	1/1:107:0,104,0:0:0:104,0:3668,0:-329.977,-31.3071,0,-329.977,-31.3071,-329.977	1/1:65:0,64,0:0:0:64,0:2239,0:-201.413,-19.2659,0,-201.413,-19.2659,-201.413	1/2:1036:0,410,617:0:0:410,617:14391,21561:-2924.3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chr07	1744524	.	T	A	130387	PASS	AB=0.491587;ABP=10.2444;AC=52;AF=0.276596;AN=188;AO=5796;CIGAR=1X;DP=21197;DPB=21197;DPRA=1.37678;EPP=12588.9;EPPR=33406.8;GTI=0;LEN=1;MEANALT=1.15254;MQM=59.9624;MQMR=59.9903;NS=94;NUMALT=1;ODDS=12.8767;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205050;QR=548395;RO=15383;RPL=3201;RPP=140.595;RPPR=319.352;RPR=2595;RUN=1;SAF=3201;SAP=140.595;SAR=2595;SRF=8440;SRP=319.352;SRR=6943;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:66:38,27:38:1347:27:941:-65.0753,0,-101.603	0/1:369:203,166:203:7223:166:5896:-419.6,0,-539.047	0/1:279:146,133:146:5211:133:4721:-340.747,0,-385.142	0/1:306:165,141:165:5899:141:4987:-356.864,0,-438.905	0/0:149:149,0:149:5312:0:0:0,-44.8535,-478.186	0/0:129:129,0:129:4602:0:0:0,-38.8329,-414.345	0/1:303:155,148:155:5551:148:5260:-382.324,0,-408.501	0/1:473:255,218:255:9099:218:7742:-554.419,0,-676.492	0/0:222:222,0:222:7903:0:0:0,-66.8287,-711.298	0/1:364:189,175:189:6751:175:6128:-442.05,0,-498.09	0/0:164:164,0:164:5801:0:0:0,-49.3689,-522.208	0/1:171:78,93:78:2762:93:3299:-245.653,0,-197.346	0/0:165:165,0:165:5891:0:0:0,-49.6699,-530.301	0/1:175:85,90:85:3019:90:3162:-232.121,0,-219.262	0/1:194:94,100:94:3350:100:3530:-259.509,0,-243.317	0/1:141:69,72:69:2451:72:2531:-185.595,0,-178.395	0/1:171:69,102:69:2450:102:3612:-273.811,0,-169.278	0/1:181:94,87:94:3326:87:3092:-224.02,0,-245.073	0/0:118:118,0:118:4211:0:0:0,-35.5215,-379.163	0/1:494:271,221:271:9699:221:7844:-557.49,0,-724.264	0/0:380:380,0:380:13538:0:0:0,-114.391,-1218.21	0/1:183:67,116:67:2389:116:4127:-316.453,0,-160.177	0/1:171:91,76:91:3236:76:2695:-192.163,0,-240.829	0/1:280:144,136:144:5151:136:4714:-340.137,0,-379.443	0/1:170:101,69:101:3594:69:2445:-169.127,0,-272.492	0/0:880:878,1:878:31288:1:32:0,-261.746,-2811.76	0/0:443:442,1:442:15754:1:36:0,-129.758,-1413.96	0/0:87:87,0:87:3065:0:0:0,-26.1896,-276.08	0/1:575:306,269:306:10919:269:9526:-684.195,0,-809.516	0/0:230:230,0:230:8182:0:0:0,-69.2369,-736.4	0/0:270:270,0:270:9615:0:0:0,-81.2781,-865.308	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:15:15,0:15:527:0:0:0,-4.51545,-47.7464	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:37:16,21:16:563:21:743:-56.0552,0,-39.8611	0/1:412:221,190:221:7883:190:6681:-477.377,0,-585.506	0/1:312:171,141:171:6101:141:4990:-355.328,0,-455.27	0/1:144:74,70:74:2609:70:2480:-180.106,0,-191.71	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/1:333:186,147:186:6659:147:5213:-369.067,0,-499.144	0/1:108:51,57:51:1832:57:2024:-149.922,0,-132.65	0/1:265:129,136:129:4608:136:4765:-349.239,0,-335.108	0/1:216:100,116:100:3596:116:4083:-302.636,0,-258.823	0/1:114:50,64:50:1792:64:2259:-169.254,0,-127.245	0/0:215:215,0:215:7678:0:0:0,-64.7214,-691.056	0/0:348:348,0:348:12369:0:0:0,-104.758,-1113.05	0/0:305:304,1:304:10864:1:36:0,-88.2159,-974.063	0/1:197:98,99:98:3496:99:3525:-258.139,0,-255.549	0/1:420:225,195:225:8036:195:6886:-493.376,0,-596.827	0/1:390:215,175:215:7696:175:6238:-444.116,0,-575.273	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/0:465:464,0:464:16572:0:0:0,-139.678,-1490.88	0/0:79:79,0:79:2808:0:0:0,-23.7814,-252.958	0/1:23:9,14:9:324:14:496:-38.0506,0,-22.5822	0/1:361:188,173:188:6690:173:6144:-444.387,0,-493.509	0/1:107:44,63:44:1567:63:2240:-169.654,0,-109.111	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/0:243:243,0:243:8681:0:0:0,-73.1503,-781.28	0/0:239:239,0:239:8499:0:0:0,-71.9462,-764.915	0/1:15:7,8:7:252:8:266:-19.7396,0,-18.5135	0/0:321:320,1:320:11429:1:36:0,-93.0323,-1024.89	0/0:292:292,0:292:10401:0:0:0,-87.9008,-936.016	0/1:151:69,82:69:2476:82:2903:-216.044,0,-177.638	0/0:180:178,2:178:6323:2:68:0,-47.7277,-562.707	0/1:346:178,168:178:6312:168:5929:-429.568,0,-464.019	0/1:370:130,238:130:4604:238:8440:-648.469,0,-303.386	0/1:85:38,47:38:1331:47:1632:-121.578,0,-94.5015	0/0:240:240,0:240:8520:0:0:0,-72.2472,-766.805	0/1:246:120,126:120:4264:126:4455:-327.069,0,-309.888	0/0:61:61,0:61:2175:0:0:0,-18.3628,-196.016	0/1:122:62,60:62:2212:60:2131:-155.332,0,-162.619	0/1:159:80,79:80:2838:79:2802:-204.556,0,-207.792	0/0:371:371,0:371:13185:0:0:0,-111.682,-1186.39	0/1:391:197,194:197:7068:194:6920:-505.165,0,-518.476	0/1:200:109,91:109:3831:91:3216:-229.456,0,-284.782	0/0:337:333,4:333:11848:4:144:0,-88.1335,-1052.87	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/0:342:342,0:342:12274:0:0:0,-102.952,-1104.49	0/0:269:269,0:269:9619:0:0:0,-80.9771,-865.664	0/0:580:579,1:579:20666:1:36:0,-170.999,-1855.84	0/1:220:107,113:107:3824:113:3960:-290.365,0,-278.131	0/1:145:77,68:77:2743:68:2400:-172.607,0,-203.463	0/0:236:236,0:236:8420:0:0:0,-71.0431,-757.808	0/1:295:156,136:156:5575:136:4838:-347.316,0,-413.613	0/0:108:108,0:108:3851:0:0:0,-32.5112,-346.787	0/0:149:149,0:149:5301:0:0:0,-44.8535,-477.227	0/0:160:159,0:159:5659:0:0:0,-47.8638,-509.074	0/1:117:56,61:56:1995:61:2149:-158.454,0,-144.603	0/1:190:111,77:111:3972:77:2732:-189.206,0,-300.762	0/1:194:69,125:69:2480:125:4438:-341.195,0,-165.053	0/0:240:240,0:240:8560:0:0:0,-72.2472,-770.4	0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chr07	1902395	.	T	A	117760	PASS	AB=0.480446;ABP=39.0164;AC=52;AF=0.276596;AN=188;AO=5223;CIGAR=1X;DP=19816;DPB=19816;DPRA=1.20424;EPP=11344.6;EPPR=31676.1;GTI=1;LEN=1;MEANALT=1.08065;MQM=56.2474;MQMR=59.8067;NS=94;NUMALT=1;ODDS=1.57819;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=186433;QR=520273;RO=14586;RPL=2404;RPP=74.6132;RPPR=53.7846;RPR=2819;RUN=1;SAF=2404;SAP=74.6132;SAR=2819;SRF=7001;SRP=53.7846;SRR=7585;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:153:82,71:82:2920:71:2518:-179.891,0,-216.562	0/1:323:178,144:178:6365:144:5107:-360.575,0,-475.648	0/1:284:132,152:132:4732:152:5452:-403.466,0,-340.501	0/1:619:310,309:310:11076:309:10998:-802.122,0,-810.388	0/0:156:156,0:156:5600:0:0:0,-46.9607,-504.099	0/0:138:138,0:138:4933:0:0:0,-41.5421,-444.076	0/1:277:167,110:167:5927:110:3933:-270.459,0,-450.104	0/1:219:134,85:134:4784:85:3014:-205.043,0,-364.784	0/0:261:259,1:259:9257:1:32:0,-75.4079,-829.794	0/1:176:93,83:93:3340:83:2956:-212.135,0,-247.835	0/0:124:124,0:124:4432:0:0:0,-37.3277,-398.981	0/1:170:88,82:88:3127:82:2948:-212.039,0,-230.45	0/0:187:187,0:187:6636:0:0:0,-56.2926,-597.3	0/1:134:88,46:88:3160:46:1639:-106.992,0,-244.232	0/1:150:74,76:74:2625:76:2728:-199.842,0,-191.333	0/1:120:59,61:59:2116:61:2184:-159.817,0,-154.567	0/1:133:68,65:68:2436:65:2320:-168.468,0,-179.458	0/1:87:49,37:49:1748:37:1315:-91.7627,0,-131.355	0/0:100:100,0:100:3575:0:0:0,-30.103,-321.932	0/1:395:208,187:208:7430:187:6695:-482.937,0,-549.83	0/0:372:372,0:372:13256:0:0:0,-111.983,-1192.82	0/1:219:58,161:58:2075:161:5753:-451.302,0,-121.094	0/1:218:115,103:115:4132:103:3700:-267.083,0,-306.297	0/1:236:153,83:153:5444:83:2973:-196.467,0,-419.032	0/1:177:86,91:86:3067:91:3248:-238.482,0,-221.947	0/0:659:659,0:659:23541:0:0:0,-198.379,-2117.99	0/0:566:563,1:563:20104:1:36:0,-166.573,-1805.08	0/0:80:80,0:80:2853:0:0:0,-24.0824,-256.994	0/1:632:328,304:328:11701:304:10829:-783.289,0,-862.674	0/0:288:288,0:288:10289:0:0:0,-86.6966,-925.915	0/0:261:261,0:261:9283:0:0:0,-78.5688,-835.346	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.742	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:21:21,0:21:744:0:0:0,-6.32163,-66.3438	0/1:20:10,10:10:351:10:360:-26.5115,0,-25.9061	0/1:421:215,206:215:7661:206:7341:-533.641,0,-562.791	0/1:308:179,129:179:6368:129:4603:-321.467,0,-480.46	0/1:92:46,46:46:1656:46:1618:-117.646,0,-121.617	0/1:11:3,8:3:108:8:288:-22.8943,0,-6.76384	0/1:307:157,150:157:5579:150:5365:-390.102,0,-409.8	0/1:59:31,28:31:1089:28:989:-71.1961,0,-80.5542	0/1:340:170,170:170:6067:170:6053:-441.462,0,-443.759	0/1:157:91,66:91:3224:66:2355:-164.801,0,-243.118	0/1:117:58,59:58:2059:59:2116:-155.164,0,-150.358	0/0:305:305,0:305:10892:0:0:0,-91.8141,-979.858	0/0:260:260,0:260:9245:0:0:0,-78.2678,-831.952	0/0:488:487,1:487:17379:1:36:0,-143.309,-1559.93	0/1:201:104,97:104:3721:97:3478:-251.584,0,-274.569	0/1:307:146,161:146:5220:161:5758:-425.267,0,-377.514	0/1:280:163,117:163:5824:117:4203:-294.026,0,-439.984	0/0:12:11,1:11:387:1:36:0,-0.0140849,-31.5677	0/0:219:219,0:219:7844:0:0:0,-65.9256,-705.876	0/0:154:153,1:153:5450:1:36:0,-42.7603,-485.997	0/1:17:11,6:11:396:6:216:-14.5916,0,-30.6737	0/1:262:134,128:134:4790:128:4553:-329.813,0,-352.339	0/1:123:55,68:55:1964:68:2395:-178.43,0,-140.009	0/1:19:15,4:15:536:4:140:-7.22021,0,-42.8552	0/0:33:33,0:33:1148:0:0:0,-9.93399,-103.623	0/0:169:169,0:169:6036:0:0:0,-50.8741,-542.938	0/0:209:209,0:209:7440:0:0:0,-62.9153,-669.591	0/1:11:9,2:9:320:2:72:-3.4955,0,-25.8287	0/0:439:438,1:438:15573:1:36:0,-128.554,-1397.12	0/0:468:466,2:466:16609:2:66:0,-134.644,-1487.35	0/1:150:85,65:85:3023:65:2318:-163.367,0,-227.126	0/0:239:239,0:239:8535:0:0:0,-71.9462,-768.062	0/1:362:197,164:197:7060:164:5868:-418.319,0,-526.402	0/1:229:75,154:75:2671:154:5527:-427.864,0,-171.695	0/1:64:31,33:31:1099:33:1158:-84.6728,0,-79.9379	0/0:137:137,0:137:4890:0:0:0,-41.2411,-440.235	0/1:156:87,69:87:3104:69:2474:-174.963,0,-232.623	0/0:42:42,0:42:1483:0:0:0,-12.6433,-133.764	0/1:277:161,116:161:5725:116:4136:-286.655,0,-431.889	0/1:195:112,83:112:3980:83:2952:-205.979,0,-299.671	0/0:347:347,0:347:12305:0:0:0,-104.457,-1106.82	0/1:270:137,133:137:4884:133:4759:-346.732,0,-358.429	0/1:244:96,148:96:3392:148:5293:-401.485,0,-232.029	0/0:226:224,2:224:7989:2:72:0,-61.2331,-712.001	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:236:235,0:235:8374:0:0:0,-70.742,-753.09	0/0:244:242,2:242:8638:2:72:0,-66.6517,-770.579	0/0:442:442,0:442:15772:0:0:0,-133.055,-1418.55	0/1:243:130,113:130:4645:113:4029:-289.113,0,-345.005	0/1:150:74,76:74:2652:76:2728:-200.159,0,-193.765	0/0:171:169,2:169:6030:2:72:0,-44.6398,-535.942	0/1:271:154,117:154:5499:117:4166:-292.2,0,-413.446	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.077	0/0:155:155,0:155:5519:0:0:0,-46.6596,-496.797	0/0:126:126,0:126:4484:0:0:0,-37.9298,-403.518	0/1:91:48,43:48:1716:43:1548:-111.904,0,-127.332	0/1:217:116,101:116:4126:101:3588:-255.937,0,-305.973	0/1:149:60,89:60:2139:89:3182:-241.549,0,-147.924	0/0:295:295,0:295:10559:0:0:0,-88.8038,-950.197	0/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chr07	1902450	.	AG	CC,CG	220797	PASS	AB=0.508729,0.489196;ABP=6.83937,8.87534;AC=135,53;AF=0.718085,0.281915;AN=188;AO=7603,2832;CIGAR=2X,1X1M;DP=10452;DPB=10454;DPRA=0,1.00771;EPP=16512.7,6152.62;EPPR=11.6962;GTI=2;LEN=2,1;MEANALT=1.7234,2.14545;MQM=59.9766,59.9587;MQMR=57;NS=94;NUMALT=2;ODDS=0.807507;PAIRED=0,0;PAIREDR=0;PAO=2,2;PQA=70,70;PQR=0;PRO=0;QA=268956,101265;QR=133;RO=4;RPL=7603,2832;RPP=16512.7,6152.62;RPPR=11.6962;RPR=0,0;RUN=1,1;SAF=0,0;SAP=16512.7,6152.62;SAR=7603,2832;SRF=0;SRP=11.6962;SRR=4;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:59:0,19,40:0:0:19,40:672,1409:-169.608,-115.064,-109.344,-54.896,0,-42.8548	1/2:253:0,141,111:0:0:141,111:4972,3965:-728.095,-323.266,-280.821,-404.825,0,-371.411	1/2:122:0,54,68:0:0:54,68:1889,2433:-352.43,-198.754,-182.498,-154.029,0,-133.559	1/2:358:0,177,181:0:0:177,181:6274,6476:-1039.5,-528.378,-475.095,-511.414,0,-456.927	1/1:89:0,89,0:0:0:89,0:3129,0:-281.835,-26.7917,0,-281.835,-26.7917,-281.835	1/1:73:0,73,0:0:0:73,0:2581,0:-232.537,-21.9752,0,-232.537,-21.9752,-232.537	1/2:137:0,77,60:0:0:77,60:2729,2148:-397.844,-175.526,-152.346,-222.675,0,-204.613	1/2:140:0,84,56:0:0:84,56:2942,2004:-403.146,-163.774,-138.488,-239.726,0,-222.868	1/1:124:0,124,0:0:0:124,0:4346,0:-391.317,-37.3277,0,-391.317,-37.3277,-391.317	1/2:114:1,73,40:1:36:73,40:2564,1413:-320.234,-111.855,-92.8176,-205.735,0,-196.631	1/1:26:0,26,0:0:0:26,0:930,0:-84.0189,-7.82678,0,-84.0189,-7.82678,-84.0189	1/2:65:0,35,29:0:0:35,29:1232,1035:-184.757,-84.4646,-73.9285,-100.392,0,-91.6623	1/1:63:0,63,0:0:0:63,0:2231,0:-201.053,-18.9649,0,-201.053,-18.9649,-201.053	1/2:49:0,30,18:0:0:30,18:1065,648:-139.665,-52.8924,-43.8615,-86.7896,0,-81.371	1/2:50:0,26,24:0:0:26,24:934,864:-147.051,-70.8578,-63.0311,-76.5525,0,-69.3278	1/2:52:0,25,27:0:0:25,27:887,968:-151.575,-79.3096,-71.7838,-72.6215,0,-64.4937	1/2:94:0,45,49:0:0:45,49:1614,1751:-274.769,-143.123,-129.577,-132.004,0,-117.253	1/2:58:0,33,25:0:0:33,25:1171,900:-169.2,-73.7953,-63.8613,-95.7626,0,-88.2369	1/1:36:0,36,0:0:0:36,0:1283,0:-115.771,-10.8371,0,-115.771,-10.8371,-115.771	1/2:207:0,93,114:0:0:93,114:3284,4058:-598.516,-331.088,-303.092,-267.782,0,-233.465	1/1:222:0,221,0:0:0:221,0:7866,0:-707.609,-66.5276,0,-707.609,-66.5276,-707.609	1/2:133:0,36,96:0:0:36,96:1259,3424:-381.533,-279.113,-268.276,-102.412,0,-73.5131	1/2:89:0,46,43:0:0:46,43:1641,1544:-260.081,-126.309,-112.461,-134.13,0,-121.186	1/2:121:0,72,49:0:0:72,49:2575,1756:-353.54,-143.574,-121.899,-210.325,0,-195.574	1/2:77:0,44,33:0:0:44,33:1542,1172:-221.324,-95.8535,-82.6082,-125.824,0,-115.89	1/1:415:0,414,0:0:0:414,0:14598,0:-1313.21,-124.626,0,-1313.21,-124.626,-1313.21	1/1:252:0,252,0:0:0:252,0:8908,0:-801.648,-75.8596,0,-801.648,-75.8596,-801.648	1/1:36:0,36,0:0:0:36,0:1292,0:-116.584,-10.8371,0,-116.584,-10.8371,-116.584	1/2:367:0,191,176:0:0:191,176:6774,6313:-1067.16,-515.276,-457.78,-552.238,0,-499.257	1/1:185:0,185,0:0:0:185,0:6581,0:-592.371,-55.6906,0,-592.371,-55.6906,-592.371	1/1:135:0,135,0:0:0:135,0:4797,0:-431.876,-40.6391,0,-431.876,-40.6391,-431.876	1/1:14:0,14,0:0:0:14,0:493,0:-44.7017,-4.21442,0,-44.7017,-4.21442,-44.7017	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:10:0,10,0:0:0:10,0:349,0:-31.7447,-3.0103,0,-31.7447,-3.0103,-31.7447	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/2:10:0,3,7:0:0:3,7:106,252:-29.5348,-20.9039,-20.0008,-8.98601,0,-6.8788	1/2:203:0,92,110:0:0:92,110:3255,3921:-584.806,-319.686,-291.992,-265.191,0,-232.078	1/2:223:1,117,105:1:25:117,105:4163,3760:-643.764,-304.791,-271.516,-337.435,0,-307.773	1/2:38:0,16,22:0:0:16,22:576,784:-111.261,-64.2613,-59.4448,-47.3585,0,-40.7358	1/2:4:0,1,3:0:0:1,3:36,108:-12.1095,-9.17208,-8.87105,-3.29724,0,-2.39415	1/2:198:0,99,98:0:0:99,98:3518,3512:-573.094,-286.429,-256.627,-286.662,0,-257.161	1/2:28:0,16,12:0:0:16,12:570,432:-82.0671,-35.6088,-30.7924,-46.8165,0,-43.2041	1/2:175:0,84,91:0:0:84,91:2932,3229:-501.909,-263.436,-238.149,-238.825,0,-211.431	1/2:86:0,52,34:0:0:52,34:1810,1220:-247.04,-99.8718,-84.2182,-147.523,0,-137.288	1/2:63:0,30,33:0:0:30,33:1069,1188:-184.427,-97.2946,-88.2637,-87.4901,0,-77.5561	1/1:171:0,171,0:0:0:171,0:5992,0:-539.391,-51.4761,0,-539.391,-51.4761,-539.391	1/1:135:0,135,0:0:0:135,0:4788,0:-431.077,-40.6391,0,-431.077,-40.6391,-431.077	1/1:278:0,278,0:0:0:278,0:9838,0:-885.309,-83.6863,0,-885.309,-83.6863,-885.309	1/2:126:0,55,71:0:0:55,71:1942,2542:-365.801,-207.658,-191.101,-158.498,0,-137.125	1/2:186:0,75,110:0:0:75,110:2680,3941:-539.916,-321.407,-298.829,-218.507,0,-185.394	1/2:175:0,112,63:0:0:112,63:3984,2249:-508.386,-183.707,-149.991,-325.036,0,-306.071	1/2:5:0,4,1:0:0:4,1:144,36:-15.0469,-3.29724,-2.09312,-12.1095,0,-11.8085	1/1:126:0,126,0:0:0:126,0:4481,0:-403.459,-37.9298,0,-403.459,-37.9298,-403.459	1/1:41:0,40,1:0:0:40,1:1412,36:-127.015,-12.0412,0,-124.078,-8.74396,-123.777	1/2:11:0,8,3:0:0:8,3:288,108:-32.6714,-9.17208,-6.76384,-23.8592,0,-22.9561	1/2:141:0,73,68:0:0:73,68:2590,2436:-410.041,-199.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chr07	2093125	.	C	A	129668	PASS	AB=0.526783;ABP=70.3585;AC=53;AF=0.281915;AN=188;AO=5719;CIGAR=1X;DP=19284;DPB=19284;DPRA=1.12972;EPP=12395.6;EPPR=29396.1;GTI=0;LEN=1;MEANALT=1.21875;MQM=59.8645;MQMR=59.988;NS=94;NUMALT=1;ODDS=1.76592;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201387;QR=479342;RO=13548;RPL=3234;RPP=216.019;RPPR=492.746;RPR=2485;RUN=1;SAF=3237;SAP=219.446;SAR=2482;SRF=7651;SRP=496.114;SRR=5897;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:113:55,58:55:1907:58:2056:-151.294,0,-137.886	0/1:204:97,107:97:3430:107:3746:-275.934,0,-247.503	0/1:289:145,144:145:5119:144:5081:-370.413,0,-373.857	0/1:475:221,253:221:7831:253:8929:-660.432,0,-561.779	0/0:166:163,3:163:5808:3:100:0,-40.6405,-513.507	0/0:158:158,0:158:5622:0:0:0,-47.5627,-506.103	0/1:286:151,134:151:5313:134:4743:-340.878,0,-392.158	0/1:377:192,185:192:6776:185:6542:-474.68,0,-496.432	0/0:233:233,0:233:8183:0:0:0,-70.14,-736.492	0/1:249:106,143:106:3749:143:5030:-377.857,0,-262.656	0/0:177:177,0:177:6255:0:0:0,-53.2823,-563.05	0/1:221:108,112:108:3819:112:3961:-290.094,0,-277.319	0/0:184:184,0:184:6521:0:0:0,-55.3895,-586.975	0/1:153:80,71:80:2790:71:2521:-181.326,0,-205.524	0/1:198:95,103:95:3354:103:3612:-265.681,0,-242.473	0/1:154:62,92:62:2186:92:3280:-248.902,0,-150.647	0/1:162:75,87:75:2675:87:3052:-226.142,0,-192.228	0/1:105:52,53:52:1844:53:1873:-137.237,0,-134.629	0/0:108:108,0:108:3795:0:0:0,-32.5112,-341.643	0/1:272:139,132:139:4953:132:4596:-331.855,0,-363.981	0/0:331:331,0:331:11721:0:0:0,-99.6409,-1054.77	0/1:142:46,96:46:1627:96:3397:-263.197,0,-103.972	0/1:200:123,77:123:4377:77:2690:-182.136,0,-333.898	0/1:237:120,117:120:4235:117:4143:-301.708,0,-309.988	0/1:164:79,85:79:2820:85:2983:-219.328,0,-204.671	0/0:720:720,0:720:25530:0:0:0,-216.742,-2295.91	0/0:473:469,4:469:16630:4:144:0,-129.074,-1483.05	0/0:93:92,1:92:3261:1:32:0,-24.7965,-290.512	0/1:459:220,238:220:7772:238:8373:-615.295,0,-561.289	0/0:233:233,0:233:8318:0:0:0,-70.14,-748.63	0/0:253:253,0:253:9002:0:0:0,-76.1606,-810.164	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:44:44,0:44:1541:0:0:0,-13.2453,-138.977	0/0:12:12,0:12:424:0:0:0,-3.61236,-38.4964	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/1:28:12,16:12:419:16:538:-40.2896,0,-29.6138	0/1:485:243,241:243:8528:241:8526:-621.278,0,-621.472	0/1:248:115,132:115:4046:132:4650:-343.943,0,-289.616	0/1:128:58,70:58:2054:70:2481:-185.01,0,-146.599	0/1:5:2,3:2:59:3:100:-7.82529,0,-4.09899	0/1:282:139,143:139:4945:143:5032:-368.115,0,-360.311	0/1:81:47,34:47:1684:34:1207:-84.5518,0,-127.464	0/1:303:153,150:153:5457:150:5213:-378.09,0,-400.047	0/1:188:82,106:82:2846:106:3775:-283.356,0,-199.78	0/1:151:66,85:66:2343:85:2974:-222.303,0,-165.674	0/0:217:217,0:217:7711:0:0:0,-65.3235,-694.031	0/0:175:175,0:175:6192:0:0:0,-52.6802,-557.379	0/0:287:287,0:287:10180:0:0:0,-86.3956,-916.136	0/1:164:73,91:73:2590:91:3181:-237.142,0,-183.98	0/1:312:131,181:131:4608:181:6371:-479.555,0,-320.969	0/1:320:144,176:144:5134:176:6269:-467.958,0,-365.873	0/0:18:18,0:18:640:0:0:0,-5.41854,-57.9293	0/0:254:254,0:254:8997:0:0:0,-76.4616,-809.716	0/0:113:113,0:113:4012:0:0:0,-34.0164,-361.273	0/1:21:6,15:6:208:15:517:-40.5248,0,-12.7375	0/1:288:135,153:135:4725:153:5374:-397.092,0,-338.717	0/1:99:43,56:43:1523:56:1980:-148.672,0,-107.56	0/1:21:9,12:9:320:12:428:-32.5363,0,-22.8207	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:225:225,0:225:7977:0:0:0,-67.7317,-717.955	0/0:252:251,1:251:8830:1:32:0,-72.6602,-791.498	0/1:19:9,10:9:324:10:356:-26.6617,0,-23.7863	0/0:371:368,3:368:13051:3:108:0,-101.607,-1164.33	0/0:387:378,6:378:13403:6:216:0,-96.1648,-1186.18	0/1:147:69,78:69:2451:78:2697:-198.7,0,-176.593	0/0:164:163,1:163:5773:1:36:0,-45.7706,-516.093	0/1:295:147,147:147:5221:147:5114:-371.527,0,-381.169	0/1:275:86,189:86:3075:189:6670:-517.581,0,-194.195	0/1:102:52,50:52:1841:50:1758:-127.791,0,-135.263	0/0:99:99,0:99:3514:0:0:0,-29.802,-316.471	0/1:174:88,86:88:3119:86:3054:-222.708,0,-228.556	0/1:44:24,20:24:851:20:701:-50.1641,0,-63.6641	0/1:188:74,114:74:2631:114:4038:-307.011,0,-180.444	0/1:133:59,73:59:2057:73:2568:-190.53,0,-145.341	0/0:408:408,0:408:14476:0:0:0,-122.82,-1302.6	0/1:306:125,180:125:4413:180:6363:-480.617,0,-305.213	0/1:240:139,101:139:4900:101:3513:-244.131,0,-368.911	0/0:218:216,2:216:7628:2:72:0,-58.7878,-679.727	0/0:32:31,1:31:1104:1:36:0,-6.03468,-96.0724	0/0:225:225,0:225:8013:0:0:0,-67.7317,-721.195	0/0:265:265,0:265:9416:0:0:0,-79.7729,-847.41	0/0:362:359,2:359:12757:2:68:0,-102.567,-1141.49	0/1:213:100,113:100:3494:113:3988:-294.988,0,-249.19	0/1:173:83,90:83:2910:90:3163:-232.808,0,-210.057	0/0:202:202,0:202:7082:0:0:0,-60.8081,-637.446	0/1:354:172,182:172:6078:182:6432:-472.381,0,-440.561	0/0:92:92,0:92:3264:0:0:0,-27.6948,-293.98	0/0:189:189,0:189:6626:0:0:0,-56.8947,-596.429	0/0:166:166,0:166:5771:0:0:0,-49.971,-519.51	0/1:140:64,75:64:2229:75:2656:-197.082,0,-158.668	0/1:246:126,120:126:4468:120:4227:-306.551,0,-328.239	0/1:176:61,115:61:2138:115:3985:-305.86,0,-139.704	0/0:215:215,0:215:7560:0:0:0,-64.7214,-680.454	0/0:302:301,1:301:10632:1:36:0,-87.3128,-953.201
chr07	2093152	.	C	T	139155	PASS	AB=0.537636;ABP=139.493;AC=53;AF=0.281915;AN=188;AO=5989;CIGAR=1X;DP=19604;DPB=19604;DPRA=1.16;EPP=12938.6;EPPR=29461.3;GTI=1;LEN=1;MEANALT=1.04762;MQM=59.8325;MQMR=59.9877;NS=94;NUMALT=1;ODDS=2.81999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=213771;QR=483905;RO=13610;RPL=3414;RPP=258.236;RPPR=453.324;RPR=2575;RUN=1;SAF=3408;SAP=250.987;SAR=2581;SRF=7634;SRP=441.607;SRR=5976;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:119:55,64:55:1963:64:2300:-171.436,0,-141.122	0/1:208:101,107:101:3565:107:3818:-281.183,0,-258.444	0/1:297:142,155:142:5037:155:5526:-407.651,0,-364.071	0/1:487:219,268:219:7782:268:9571:-714.621,0,-553.813	0/0:167:163,3:163:5784:3:108:0,-40.2556,-510.6	0/0:154:154,0:154:5479:0:0:0,-46.3586,-493.238	0/1:286:145,140:145:5137:140:5023:-366.061,0,-376.318	0/1:385:192,193:192:6814:193:6856:-500.939,0,-497.439	0/0:233:233,0:233:8283:0:0:0,-70.14,-745.484	0/1:251:105,146:105:3732:146:5161:-388.989,0,-260.522	0/0:178:178,0:178:6316:0:0:0,-53.5833,-568.534	0/1:225:108,117:108:3832:117:4169:-307.659,0,-277.298	0/0:183:183,0:183:6496:0:0:0,-55.0885,-584.724	0/1:160:82,78:82:2886:78:2767:-201.105,0,-211.811	0/1:204:99,105:99:3521:105:3751:-276.347,0,-255.689	0/1:161:65,96:65:2287:96:3407:-258.272,0,-157.621	0/1:165:76,89:76:2706:89:3196:-238.193,0,-194.113	0/1:110:53,57:53:1896:57:2039:-150.666,0,-137.805	0/0:107:107,0:107:3810:0:0:0,-32.2102,-343.098	0/1:287:141,146:141:5024:146:5205:-382.132,0,-365.911	0/0:339:339,0:339:12069:0:0:0,-102.049,-1086.07	0/1:147:47,100:47:1666:100:3531:-273.748,0,-105.975	0/1:203:122,81:122:4349:81:2904:-200.48,0,-330.476	0/1:239:120,119:120:4273:119:4259:-311.539,0,-312.802	0/1:170:84,86:84:3005:86:3084:-226.605,0,-219.504	0/0:723:723,0:723:25675:0:0:0,-217.645,-2308.6	0/0:476:474,2:474:16901:2:72:0,-136.454,-1513.77	0/0:92:91,1:91:3216:1:36:0,-24.0965,-286.062	0/1:474:225,249:225:8014:249:8868:-655.329,0,-578.594	0/0:233:233,0:233:8293:0:0:0,-70.14,-746.363	0/0:253:253,0:253:9024:0:0:0,-76.1606,-812.141	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2075	0/0:45:45,0:45:1607:0:0:0,-13.5463,-144.919	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:31:13,18:13:464:18:631:-47.782,0,-32.7656	0/1:490:237,253:237:8387:253:9061:-667.899,0,-607.338	0/1:258:117,141:117:4160:141:5030:-375.17,0,-296.909	0/1:128:55,73:55:1932:73:2617:-197.245,0,-135.622	0/1:5:2,3:2:68:3:108:-8.57002,0,-4.95256	0/1:291:141,150:141:4989:150:5348:-393.83,0,-361.558	0/1:82:46,36:46:1648:36:1292:-91.8993,0,-123.924	0/1:313:158,155:158:5632:155:5517:-402.396,0,-412.779	0/1:198:78,120:78:2739:120:4274:-325.23,0,-187.149	0/1:152:63,89:63:2264:89:3166:-239.246,0,-158.266	0/0:218:218,0:218:7752:0:0:0,-65.6245,-697.716	0/0:174:174,0:174:6231:0:0:0,-52.3792,-560.885	0/0:289:289,0:289:10295:0:0:0,-86.9977,-926.479	0/1:166:76,90:76:2702:90:3205:-238.694,0,-193.453	0/1:320:130,190:130:4606:190:6785:-514.387,0,-318.373	0/1:332:146,186:146:5196:186:6642:-497.888,0,-367.838	0/0:18:18,0:18:636:0:0:0,-5.41854,-57.568	0/0:251:249,0:249:8854:0:0:0,-74.9565,-796.508	0/0:112:112,0:112:3998:0:0:0,-33.7154,-360.009	0/1:22:6,16:6:212:16:572:-45.1908,0,-12.8021	0/1:299:138,161:138:4887:161:5759:-428.31,0,-349.932	0/1:102:43,59:43:1507:59:2112:-159.644,0,-105.215	0/1:21:9,12:9:316:12:432:-32.8987,0,-22.4572	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:235:235,0:235:8321:0:0:0,-70.742,-748.899	0/0:250:249,1:249:8904:1:36:0,-71.6592,-797.744	0/1:21:10,11:10:360:11:396:-29.6611,0,-26.4227	0/0:375:374,1:374:13291:1:36:0,-109.288,-1192.4	0/0:395:389,6:389:13859:6:212:0,-99.482,-1227.49	0/1:149:67,82:67:2391:82:2917:-217.887,0,-170.593	0/0:159:159,0:159:5657:0:0:0,-47.8638,-509.249	0/1:298:146,152:146:5188:152:5438:-399.813,0,-377.355	0/1:282:86,196:86:3036:196:7023:-547.21,0,-188.577	0/1:105:53,52:53:1908:52:1864:-136.428,0,-140.389	0/0:98:98,0:98:3499:0:0:0,-29.5009,-315.121	0/1:178:90,88:90:3194:88:3147:-229.815,0,-234.101	0/1:47:24,23:24:860:23:819:-59.8808,0,-63.5734	0/1:191:76,115:76:2689:115:4088:-310.59,0,-184.758	0/1:134:57,77:57:2027:77:2747:-206.88,0,-142.364	0/0:412:412,0:412:14626:0:0:0,-124.024,-1316.09	0/1:311:123,188:123:4370:188:6739:-512.948,0,-299.856	0/1:241:141,100:141:5009:100:3535:-245.811,0,-378.409	0/0:222:218,4:218:7761:4:144:0,-53.515,-685.209	0/0:32:31,1:31:1093:1:36:0,-6.03468,-95.0794	0/0:227:227,0:227:8051:0:0:0,-68.3338,-724.614	0/0:271:271,0:271:9641:0:0:0,-81.5791,-867.644	0/0:359:355,3:355:12702:3:108:0,-98.0534,-1132.93	0/1:222:99,123:99:3507:123:4416:-330.764,0,-249.012	0/1:179:86,93:86:3061:93:3323:-245.393,0,-221.834	0/0:206:206,0:206:7292:0:0:0,-62.0122,-656.337	0/1:366:174,192:174:6211:192:6856:-506.892,0,-448.909	0/0:90:90,0:90:3182:0:0:0,-27.0927,-286.603	0/0:185:185,0:185:6569:0:0:0,-55.6905,-591.291	0/0:169:169,0:169:6007:0:0:0,-50.8741,-540.735	0/1:144:66,78:66:2354:78:2792:-208.172,0,-168.769	0/1:252:129,123:129:4568:123:4416:-321.726,0,-335.426	0/1:185:62,123:62:2207:123:4373:-338.054,0,-143.204	0/0:212:212,0:212:7577:0:0:0,-63.8184,-681.969	0/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chr07	2176095	.	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chr07	2665603	.	A	C	34829.4	PASS	AB=0.493845;ABP=4.37356;AC=49;AF=0.260638;AN=188;AO=2061;CIGAR=1X;DP=7667;DPB=7667;DPRA=1.09443;EPP=4357.64;EPPR=11773.5;GTI=1;LEN=1;MEANALT=1.01695;MQM=59.8729;MQMR=59.7617;NS=94;NUMALT=1;ODDS=2.02664;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73535;QR=200985;RO=5603;RPL=2047;RPP=4357.64;RPPR=11782;RPR=14;RUN=1;SAF=2061;SAP=4478.41;SAR=0;SRF=5602;SRP=12161.1;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:20,24:20:716:24:860:-64.4756,0,-51.4525	0/1:74:52,22:52:1872:22:792:-49.3285,0,-146.483	0/1:56:27,29:27:972:29:1044:-77.4171,0,-70.9402	0/1:154:90,64:90:3216:64:2288:-159.823,0,-243.304	0/0:61:60,1:60:2156:1:36:0,-14.7646,-190.701	0/0:49:49,0:49:1751:0:0:0,-14.7505,-157.872	0/1:83:55,28:55:1980:28:999:-65.239,0,-153.489	0/1:146:63,82:63:2256:82:2936:-220.387,0,-159.29	0/0:91:91,0:91:3272:0:0:0,-27.3937,-294.687	0/1:74:44,30:44:1580:30:1080:-75.237,0,-120.215	0/0:39:38,0:38:1364:0:0:0,-11.4391,-122.701	0/1:117:50,67:50:1796:67:2362:-177.614,0,-126.381	0/0:102:102,0:102:3664:0:0:0,-30.7051,-329.926	0/1:62:27,35:27:964:35:1256:-94.6814,0,-68.368	0/1:91:48,43:48:1728:43:1540:-111.499,0,-128.383	0/1:65:34,31:34:1208:31:1101:-79.8252,0,-89.3507	0/1:49:23,26:23:828:26:932:-69.4484,0,-60.0238	0/1:42:17,25:17:612:25:885:-67.3214,0,-42.7002	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:148:68,80:68:2448:80:2829:-210.289,0,-175.908	0/0:117:117,0:117:4196:0:0:0,-35.2205,-377.81	0/1:118:42,76:42:1497:76:2708:-208.397,0,-99.501	0/1:116:58,58:58:2088:58:2051:-149.87,0,-153.27	0/1:50:24,26:24:860:26:924:-68.4262,0,-62.6703	0/1:92:37,55:37:1324:55:1955:-148.529,0,-91.7673	0/0:207:207,0:207:7421:0:0:0,-62.3132,-667.932	0/0:224:224,0:224:8028:0:0:0,-67.4307,-722.526	0/0:49:49,0:49:1764:0:0:0,-14.7505,-158.954	0/1:153:91,62:91:3261:62:2216:-153.647,0,-247.651	0/0:96:94,2:94:3364:2:72:0,-22.0622,-296.139	0/0:107:107,0:107:3844:0:0:0,-32.2102,-346.155	0/1:13:9,4:9:324:4:140:-9.03119,0,-25.5774	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.0666	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.29	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5474	0/0:29:28,1:28:1008:1:32:0,-5.53056,-87.6431	0/1:232:107,125:107:3840:125:4439:-329.837,0,-275.956	0/1:126:62,64:62:2224:64:2285:-167.982,0,-162.494	0/1:49:32,17:32:1148:17:608:-40.3016,0,-88.1774	0/1:11:10,1:10:360:1:36:-0.286945,0,-29.2975	0/1:144:91,53:91:3272:53:1891:-127.119,0,-251.306	0/1:47:26,21:26:936:21:756:-54.2188,0,-70.4064	0/1:109:49,60:49:1751:60:2148:-160.774,0,-124.994	0/1:88:48,40:48:1711:40:1440:-103.407,0,-127.784	0/1:88:46,42:46:1652:42:1496:-108.419,0,-122.32	0/0:84:83,0:83:2980:0:0:0,-24.9855,-267.95	0/0:101:97,4:97:3465:4:144:0,-17.0904,-298.711	0/0:138:137,1:137:4899:1:36:0,-37.9439,-437.451	0/1:74:38,36:38:1360:36:1296:-94.6677,0,-100.424	0/1:79:38,41:38:1368:41:1463:-108.184,0,-99.6111	0/1:62:40,22:40:1432:22:783:-52.1291,0,-110.514	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:59:59,0:59:2108:0:0:0,-17.7608,-189.989	0/0:79:79,0:79:2844:0:0:0,-23.7814,-256.197	0/0:16:15,1:15:540:1:36:0,-1.2182,-43.9878	0/1:143:73,70:73:2616:70:2497:-181.934,0,-192.64	0/1:35:14,21:14:504:21:744:-56.7097,0,-35.162	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:10:10,0:10:341:0:0:0,-3.0103,-31.0178	0/0:85:85,0:85:3060:0:0:0,-25.5875,-275.628	0/0:87:87,0:87:3114:0:0:0,-26.1896,-280.485	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/0:164:164,0:164:5889:0:0:0,-49.3689,-529.746	0/0:119:118,1:118:4232:1:36:0,-32.2243,-377.432	0/1:44:26,18:26:928:18:640:-44.684,0,-70.548	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/1:151:75,76:75:2692:76:2720:-199.573,0,-197.069	0/1:102:41,61:41:1468:61:2188:-166.466,0,-101.711	0/1:31:14,17:14:504:17:612:-46.0806,0,-36.321	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.06	0/1:45:30,15:30:1076:15:540:-35.3795,0,-83.4405	0/1:15:8,7:8:288:7:248:-18.1487,0,-21.752	0/0:132:132,0:132:4728:0:0:0,-39.736,-425.673	0/1:63:38,25:38:1364:25:882:-60.7307,0,-104.095	0/0:151:151,0:151:5404:0:0:0,-45.4555,-486.486	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/1:104:51,53:51:1805:53:1904:-140.33,0,-131.421	0/0:58:56,2:56:2004:2:72:0,-10.623,-173.791	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4478	0/0:57:56,1:56:2012:1:36:0,-13.5604,-177.75	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.227	0/0:154:153,1:153:5500:1:36:0,-42.7603,-491.439	0/1:98:47,51:47:1692:51:1826:-135.12,0,-122.695	0/1:92:46,46:46:1656:46:1639:-120.103,0,-121.634	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/1:176:85,91:85:3060:91:3218:-236.857,0,-222.637	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.762	0/0:86:86,0:86:3088:0:0:0,-25.8886,-278.111	0/0:80:80,0:80:2876:0:0:0,-24.0824,-259.075	0/1:44:19,25:19:684:25:895:-67.6245,0,-48.1435	0/1:73:31,42:31:1116:42:1503:-113.587,0,-78.7552	0/1:66:31,35:31:1112:35:1260:-93.8375,0,-80.5234	0/0:121:121,0:121:4344:0:0:0,-36.4246,-391.134	0/0:123:123,0:123:4424:0:0:0,-37.0267,-398.301
chr07	3802692	.	G	A	242728	PASS	AB=0.552572;ABP=182.695;AC=136;AF=0.723404;AN=188;AO=11666;CIGAR=1X;DP=15054;DPB=15054;DPRA=0;EPP=25335.4;EPPR=7329.56;GTI=5;LEN=1;MEANALT=1.1383;MQM=54.0268;MQMR=59.778;NS=94;NUMALT=1;ODDS=1.72545;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=415016;QR=116660;RO=3374;RPL=0;RPP=25335.4;RPPR=7329.56;RPR=11666;RUN=1;SAF=0;SAP=25335.4;SAR=11666;SRF=0;SRP=7329.56;SRR=3374;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:19,25:19:659:25:892:-66.9696,0,-46.387	1/1:297:0,297:0:0:297:10566:-946.855,-89.4059,0	1/1:185:0,185:0:0:185:6577:-590.239,-55.6906,0	0/1:301:127,174:127:4377:174:6169:-463.512,0,-303.224	0/1:146:63,83:63:2207:83:2913:-217.512,0,-154.923	0/1:136:67,69:67:2359:69:2456:-177.717,0,-171.607	0/1:217:99,117:99:3395:117:4139:-306.27,0,-240.37	1/1:293:0,293:0:0:293:10355:-927.726,-88.2018,0	0/1:118:63,55:63:2177:55:1949:-139.44,0,-160.669	0/1:181:90,91:90:3123:91:3229:-235.753,0,-226.809	1/1:58:0,58:0:0:58:2081:-186.904,-17.4597,0	0/1:82:38,44:38:1309:44:1557:-114.926,0,-93.4224	1/1:126:0,126:0:0:126:4481:-400.999,-37.9298,0	1/1:80:0,80:0:0:80:2836:-254.435,-24.0824,0	1/1:59:0,59:0:0:59:2109:-189.736,-17.7608,0	0/1:45:22,23:22:747:23:828:-60.6918,0,-53.9987	1/1:95:0,95:0:0:95:3383:-302.921,-28.5979,0	1/1:45:0,45:0:0:45:1607:-144.547,-13.5464,0	0/1:34:16,17:16:540:17:608:-43.8495,0,-38.6275	0/1:408:162,246:162:5594:246:8776:-663.595,0,-380.763	0/1:189:88,100:88:3044:100:3533:-260.036,0,-217.19	1/1:175:0,175:0:0:175:6244:-560.576,-52.6803,0	0/1:150:66,83:66:2334:83:2952:-220.106,0,-164.342	1/1:189:17,172:17:580:172:6139:-498.168,-4.37715,0	0/1:112:64,48:64:2184:48:1727:-121.548,0,-163.08	1/1:604:2,602:2:72:602:21410:-1915.59,-174.985,0	0/1:295:140,155:140:4848:155:5539:-407.281,0,-347.666	0/1:39:20,19:20:708:19:661:-47.99,0,-52.3054	1/1:418:0,418:0:0:418:14881:-1336.82,-125.831,0	0/1:498:159,339:159:5578:339:12061:-932.447,0,-352.094	1/1:238:0,238:0:0:238:8510:-763.244,-71.6451,0	1/1:7:0,7:0:0:7:252:-22.8047,-2.10721,0	0/1:21:5,16:5:180:16:572:-45.2949,0,-10.2221	1/1:16:0,16:0:0:16:576:-51.8555,-4.81648,0	1/1:5:0,5:0:0:5:180:-16.5048,-1.50515,0	0/1:5:2,3:2:59:3:108:-8.54469,0,-4.09899	1/1:220:0,219:0:0:219:7772:-698.02,-65.9256,0	0/1:353:150,203:150:5173:203:7195:-539.36,0,-359.448	0/1:38:15,23:15:509:23:815:-61.8676,0,-34.6686	0/1:4:2,2:2:59:2:72:-5.62291,0,-4.40002	1/1:503:9,494:9:305:494:17616:-1553.3,-123.641,0	1/1:32:0,32:0:0:32:1140:-102.575,-9.63296,0	0/1:177:103,74:103:3588:74:2623:-182.334,0,-269.826	0/1:75:42,33:42:1460:33:1173:-83.1264,0,-109.098	1/1:90:0,90:0:0:90:3201:-287.615,-27.0927,0	0/1:152:87,65:87:2994:65:2318:-162.898,0,-223.934	1/1:245:0,245:0:0:245:8678:-776.844,-73.7524,0	1/1:431:0,431:0:0:431:15276:-1370.1,-129.744,0	0/1:275:102,172:102:3544:172:6116:-466.482,0,-236.324	0/1:282:115,167:115:3966:167:5937:-448.512,0,-272.234	0/1:244:113,130:113:3931:130:4648:-344.577,0,-280.46	0/1:10:2,8:2:59:8:288:-23.1187,0,-2.59384	0/1:257:132,125:132:4582:125:4438:-320.432,0,-335.147	0/1:74:21,53:21:719:53:1888:-147.842,0,-42.7486	1/1:30:0,30:0:0:30:1069:-95.9709,-9.0309,0	1/1:295:0,295:0:0:295:10499:-941.325,-88.8039,0	0/1:71:36,35:36:1242:35:1252:-91.4007,0,-90.6984	1/1:11:0,11:0:0:11:396:-35.9493,-3.31133,0	0/1:26:8,18:8:273:18:639:-49.749,0,-17.0734	0/1:126:57,69:57:2013:69:2455:-181.043,0,-143.472	1/1:136:1,135:1:36:135:4815:-428.447,-37.3418,0	0/1:5:1,4:1:36:4:144:-11.7129,0,-2.09312	0/1:437:146,290:146:5092:290:10336:-795.272,0,-326.805	1/1:432:1,431:1:36:431:15373:-1375.83,-126.447,0	0/1:140:79,61:79:2755:61:2192:-155.028,0,-206.044	1/1:167:0,167:0:0:167:5928:-532.206,-50.272,0	0/1:322:156,165:156:5361:165:5895:-431.129,0,-385.731	1/1:128:1,127:1:36:127:4529:-402.759,-34.9336,0	0/1:19:8,11:8:275:11:383:-29.0395,0,-19.3639	0/1:96:41,55:41:1390:55:1976:-148.21,0,-96.4665	1/1:104:0,102:0:0:102:3640:-326.913,-30.7051,0	1/1:42:0,42:0:0:42:1497:-134.717,-12.6433,0	1/1:190:0,190:0:0:190:6736:-603.242,-57.1957,0	1/1:201:0,200:0:0:200:7099:-634.947,-60.206,0	1/1:249:0,249:0:0:249:8883:-796.034,-74.9565,0	1/1:255:0,255:0:0:255:9118:-817.24,-76.7627,0	0/1:216:113,103:113:3893:103:3656:-261.899,0,-285.096	0/1:185:81,103:81:2818:103:3668:-273.369,0,-198.081	0/1:16:7,9:7:237:9:324:-24.4259,0,-16.8426	0/1:180:70,110:70:2396:110:3925:-298.13,0,-161.706	0/1:174:93,81:93:3205:81:2862:-204.081,0,-236.286	1/1:309:1,307:1:36:307:10941:-978.935,-89.4785,0	1/1:103:0,103:0:0:103:3643:-326.893,-31.0061,0	1/1:62:1,61:1:36:61:2172:-191.92,-15.0656,0	1/1:95:0,95:0:0:95:3354:-300.71,-28.5979,0	0/1:135:61,74:61:2073:74:2611:-193.449,0,-146.197	0/1:47:24,23:24:804:23:800:-57.9228,0,-58.5121	0/1:74:34,40:34:1152:40:1414:-104.783,0,-81.7035	0/1:67:26,41:26:873:41:1456:-110.66,0,-58.7088	0/1:29:16,13:16:559:13:464:-33.1843,0,-41.9077	0/1:76:33,43:33:1116:43:1517:-113.18,0,-77.8534	0/1:82:56,26:56:1922:26:919:-58.1543,0,-148.562	1/1:262:0,262:0:0:262:9323:-835.592,-78.8699,0	1/1:87:1,86:1:32:86:3063:-271.526,-22.9903,0
chr07	3802724	.	GTT	ATG,ATT	332910	PASS	AB=0.554039,0.444333;ABP=205.546,217.933;AC=135,53;AF=0.718085,0.281915;AN=188;AO=12000,3565;CIGAR=1X1M1X,1X2M;DP=15592;DPB=15592;DPRA=0,1.21137;EPP=25887.3,7744.31;EPPR=5.18177;GTI=5;LEN=3,1;MEANALT=1.92553,2.30159;MQM=53.9641,59.7173;MQMR=60;NS=94;NUMALT=2;ODDS=4.55418;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=426696,127599;QR=36;RO=1;RPL=11980,3565;RPP=25887.3,7744.31;RPPR=5.18177;RPR=20,0;RUN=1,1;SAF=0,0;SAP=26060.7,7744.31;SAR=12000,3565;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:46:0,26,20:0:0:26,20:928,712:-133.657,-58.3861,-50.5593,-75.626,0,-69.6054	1/1:313:0,311,1:0:0:311,1:11040,36:-988.209,-93.6203,0,-985.271,-90.6409,-984.97	1/1:194:0,194,0:0:0:194,0:6904,0:-619.231,-58.3998,0,-619.231,-58.3998,-619.231	1/2:314:0,173,139:0:0:173,139:6170,4986:-908.146,-406.167,-354.089,-502.021,0,-460.178	1/2:148:0,83,65:0:0:83,65:2924,2325:-427.254,-189.914,-164.928,-237.695,0,-218.128	1/2:143:0,72,70:0:0:72,70:2571,2520:-413.23,-205.683,-184.009,-207.632,0,-186.56	1/2:224:0,120,103:0:0:120,103:4247,3680:-645.021,-300.01,-263.886,-345.007,0,-314.001	1/1:306:0,304,1:0:0:304,1:10793,36:-964.397,-91.5131,0,-961.459,-88.5357,-961.158	1/2:121:0,57,64:0:0:57,64:2026,2296:-351.86,-187.632,-170.473,-164.584,0,-145.318	1/2:191:0,94,97:0:0:94,97:3350,3447:-553.183,-281.235,-252.938,-272.303,0,-243.103	1/1:60:0,59,0:0:0:59,0:2068,0:-185.353,-17.7608,0,-185.353,-17.7608,-185.353	1/2:83:0,45,38:0:0:45,38:1597,1368:-241.396,-111.982,-98.4353,-129.771,0,-118.332	1/1:127:0,127,0:0:0:127,0:4521,0:-404.468,-38.2308,0,-404.468,-38.2308,-404.468	1/1:86:0,86,0:0:0:86,0:3031,0:-271.395,-25.8886,0,-271.395,-25.8886,-271.395	1/1:61:0,61,0:0:0:61,0:2164,0:-194.516,-18.3628,0,-194.516,-18.3628,-194.516	1/2:46:0,23,23:0:0:23,23:824,828:-134.522,-67.9189,-60.9952,-66.9606,0,-60.0369	1/1:97:0,97,0:0:0:97,0:3454,0:-309.44,-29.1999,0,-309.44,-29.1999,-309.44	1/1:49:0,49,0:0:0:49,0:1744,0:-156.799,-14.7505,0,-156.799,-14.7505,-156.799	1/2:37:0,18,19:0:0:18,19:641,684:-107.45,-56.1306,-50.7121,-51.6747,0,-45.9551	1/2:422:0,253,169:0:0:253,169:8977,6072:-1222.37,-495.688,-419.527,-727.041,0,-676.167	1/2:201:0,104,97:0:0:104,97:3662,3464:-579.537,-282.727,-251.42,-297.164,0,-267.964	1/1:180:0,180,0:0:0:180,0:6402,0:-574.967,-54.1854,0,-574.967,-54.1854,-574.967	1/2:155:0,85,70:0:0:85,70:3005,2508:-449.175,-204.898,-179.31,-244.632,0,-223.56	1/2:196:0,177,19:0:0:177,19:6266,680:-564.235,-55.7934,-2.51105,-508.799,0,-503.079	1/2:118:0,49,69:0:0:49,69:1748,2480:-344.704,-202.651,-187.9,-142.41,0,-121.639	1/1:625:0,621,1:0:0:621,1:22089,32:-1983.16,-186.94,0,-1980.58,-184.348,-1980.28	1/2:307:0,160,147:0:0:160,147:5715,5276:-894.016,-430.707,-382.542,-463.666,0,-419.415	1/2:42:0,21,21:0:0:21,21:754,756:-123.418,-62.0456,-55.724,-61.7316,0,-55.4099	1/1:423:0,423,0:0:0:423,0:15110,0:-1357.02,-127.336,0,-1357.02,-127.336,-1357.02	1/2:512:0,349,163:0:0:349,163:12432,5833:-1485.66,-475.947,-370.888,-1010.07,0,-961.005	1/1:247:0,247,0:0:0:247,0:8783,0:-788.562,-74.3544,0,-788.562,-74.3544,-788.562	1/1:7:0,7,0:0:0:7,0:252,0:-22.8047,-2.10721,0,-22.8047,-2.10721,-22.8047	1/2:22:0,16,6:0:0:16,6:576,216:-64.7755,-17.976,-13.1596,-47.1588,0,-45.3527	1/1:16:0,16,0:0:0:16,0:563,0:-50.8222,-4.81648,0,-50.8222,-4.81648,-50.8222	1/1:6:0,6,0:0:0:6,0:214,0:-19.5606,-1.80618,0,-19.5606,-1.80618,-19.5606	1/2:5:0,3,2:0:0:3,2:108,72:-15.0219,-6.23466,-5.33157,-9.14675,0,-8.54469	1/1:223:0,222,1:0:0:222,1:7937,36:-712.551,-66.8287,0,-709.613,-63.5314,-709.312	1/2:366:0,204,161:0:0:204,161:7246,5716:-1054.09,-465.702,-404.291,-588.385,0,-539.919	1/2:39:1,23,15:1:36:23,15:822,536:-107.061,-40.7058,-36.7197,-63.7152,0,-62.1373	1/2:4:0,2,2:0:0:2,2:72,72:-12.1001,-6.23466,-5.6326,-6.22497,0,-5.62291	1/1:514:0,508,6:0:0:508,6:18111,216:-1624.89,-152.923,0,-1607.26,-134.939,-1605.46	1/1:32:0,32,0:0:0:32,0:1130,0:-101.675,-9.63296,0,-101.675,-9.63296,-101.675	1/2:182:0,75,107:0:0:75,107:2683,3827:-530.301,-312.386,-289.809,-218.271,0,-186.061	1/2:75:0,33,42:0:0:33,42:1179,1512:-219.634,-123.715,-113.781,-96.277,0,-83.6337	1/1:92:0,92,0:0:0:92,0:3263,0:-293.168,-27.6948,0,-293.168,-27.6948,-293.168	1/2:162:0,71,91:0:0:71,91:2518,3216:-467.158,-262.263,-240.89,-205.249,0,-177.855	1/1:255:0,255,0:0:0:255,0:9037,0:-809.149,-76.7627,0,-809.149,-76.7627,-809.149	1/1:443:0,443,0:0:0:443,0:15677,0:-1403.35,-133.356,0,-1403.35,-133.356,-1403.35	1/2:295:0,177,117:0:0:177,117:6298,4196:-854.291,-342.263,-288.98,-512.052,0,-476.831	1/2:295:0,177,117:0:0:177,117:6306,4182:-853.228,-341.06,-287.778,-512.255,0,-477.034	1/2:249:0,131,117:0:0:131,117:4664,4189:-721.346,-341.591,-302.157,-379.752,0,-344.531	1/2:10:0,8,2:0:0:8,2:271,72:-28.1256,-6.23466,-3.82642,-22.2463,0,-21.6443	1/2:271:0,128,143:0:0:128,143:4581,5117:-789.159,-417.374,-378.842,-372.143,0,-329.095	1/2:78:0,54,23:0:0:54,23:1936,824:-225.14,-67.3435,-51.0879,-157.937,0,-151.014	1/1:31:0,31,0:0:0:31,0:1112,0:-99.6452,-9.33193,0,-99.6452,-9.33193,-99.6452	1/1:306:0,305,0:0:0:305,0:10856,0:-972.797,-91.8142,0,-972.797,-91.8142,-972.797	1/2:75:0,37,38:0:0:37,38:1318,1368:-218.939,-111.974,-100.836,-107.322,0,-95.8829	1/1:11:0,11,0:0:0:11,0:396,0:-35.9493,-3.31133,0,-35.9493,-3.31133,-35.9493	1/2:27:0,20,7:0:0:20,7:704,252:-78.1172,-20.9217,-14.9011,-57.553,0,-55.4458	1/2:135:0,73,62:0:0:73,62:2604,2228:-392.589,-182.08,-160.105,-210.866,0,-192.202	1/1:137:0,136,1:0:0:136,1:4872,36:-436.893,-40.9401,0,-433.955,-37.6428,-433.654	1/2:5:0,4,1:0:0:4,1:140,36:-14.616,-3.29724,-2.09312,-11.6763,0,-11.3753	1/2:451:0,295,156:0:0:295,156:10442,5596:-1303.75,-456.782,-367.978,-847.323,0,-800.362	1/1:444:0,440,2:0:0:440,2:15639,72:-1403.49,-132.453,0,-1397.61,-126.548,-1397.01	1/2:144:0,62,82:0:0:62,82:2220,2948:-421.534,-240.864,-222.2,-181.028,0,-156.344	1/1:169:0,169,0:0:0:169,0:5995,0:-538.035,-50.8741,0,-538.035,-50.8741,-538.035	1/2:335:0,169,166:0:0:169,166:5996,5938:-970.375,-484.523,-433.649,-486.207,0,-436.236	1/1:132:0,131,1:0:0:131,1:4669,32:-418.664,-39.4349,0,-416.086,-36.5366,-415.785	1/2:19:0,11,8:0:0:11,8:386,288:-55.2222,-23.8592,-20.5478,-31.7188,0,-29.3106	1/2:99:0,55,44:0:0:55,44:1964,1569:-287.356,-128.224,-111.668,-159.487,0,-146.242	1/1:107:0,107,0:0:0:107,0:3790,0:-340.979,-32.2102,0,-340.979,-32.2102,-340.979	1/1:45:0,45,0:0:0:45,0:1580,0:-142.108,-13.5464,0,-142.108,-13.5464,-142.108	1/1:196:0,196,0:0:0:196,0:6960,0:-623.715,-59.0019,0,-623.715,-59.0019,-623.715	1/1:211:0,211,0:0:0:211,0:7452,0:-666.752,-63.5173,0,-666.752,-63.5173,-666.752	1/1:258:0,257,0:0:0:257,0:9143,0:-819.018,-77.3647,0,-819.018,-77.3647,-819.018	1/1:258:0,257,0:0:0:257,0:9187,0:-824.435,-77.3647,0,-824.435,-77.3647,-824.435	1/2:230:0,109,120:0:0:109,120:3866,4308:-663.344,-351.215,-318.402,-312.223,0,-276.099	1/2:199:0,107,92:0:0:107,92:3790,3289:-576.147,-268.465,-236.255,-308.037,0,-280.342	1/2:17:0,10,7:0:0:10,7:338,252:-48.058,-20.9217,-17.9114,-27.486,0,-25.3787	1/2:186:0,111,74:0:0:111,74:3952,2660:-538.004,-216.849,-183.434,-321.186,0,-298.91	1/2:176:0,83,93:0:0:83,93:2976,3298:-510.37,-269.034,-244.048,-241.692,0,-213.696	1/1:318:0,315,2:0:0:315,2:11216,72:-1005.88,-94.8245,0,-1000.01,-88.9494,-999.407	1/1:105:0,105,0:0:0:105,0:3738,0:-334.951,-31.6082,0,-334.951,-31.6082,-334.951	1/1:66:0,66,0:0:0:66,0:2374,0:-213.494,-19.868,0,-213.494,-19.868,-213.494	1/1:96:0,96,0:0:0:96,0:3450,0:-309.256,-28.8989,0,-309.256,-28.8989,-309.256	1/2:141:0,78,63:0:0:78,63:2785,2253:-409.571,-184.051,-160.571,-225.876,0,-206.911	1/2:47:0,23,24:0:0:23,24:828,864:-137.414,-70.8497,-63.926,-66.922,0,-59.6973	1/2:81:0,43,38:0:0:43,38:1531,1345:-234.031,-109.901,-96.9566,-124.484,0,-113.045	1/2:69:0,41,28:0:0:41,28:1468,993:-200.455,-81.2537,-68.9114,-119.556,0,-111.128	1/2:30:0,13,17:0:0:13,17:468,612:-88.2972,-50.2959,-46.3825,-38.3602,0,-33.2427	1/2:78:0,43,35:0:0:43,35:1533,1256:-227.059,-102.8,-89.8557,-124.616,0,-114.08	1/2:82:0,26,55:0:0:26,55:924,1980:-236.642,-161.556,-153.729,-75.0831,0,-58.5265	1/1:270:0,269,0:0:0:269,0:9488,0:-851.145,-80.9771,0,-851.145,-80.9771,-851.145	1/1:91:0,89,1:0:0:89,1:3162,36:-282.819,-26.7917,0,-279.881,-23.8411,-279.58
chr07	3802741	.	T	C	56799.5	PASS	AB=0.452994;ABP=151.424;AC=52;AF=0.276596;AN=188;AO=3536;CIGAR=1X;DP=15457;DPB=15457;DPRA=0.99403;EPP=7681.34;EPPR=25880.4;GTI=4;LEN=1;MEANALT=1.04762;MQM=59.7064;MQMR=54.0107;NS=94;NUMALT=1;ODDS=3.76908;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126261;QR=426650;RO=11917;RPL=3536;RPP=7681.34;RPPR=25880.4;RPR=0;RUN=1;SAF=0;SAP=7681.34;SAR=3536;SRF=0;SRP=25880.4;SRR=11917;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:25,19:25:900:19:680:-48.2838,0,-67.686	0/0:308:308,0:308:10962:0:0:0,-92.7172,-981.451	0/0:193:193,0:193:6909:0:0:0,-58.0988,-619.732	0/1:311:174,137:174:6240:137:4851:-342.615,0,-466.793	0/1:149:83,66:83:2969:66:2360:-167.782,0,-221.484	0/1:139:73,66:73:2609:66:2353:-170.16,0,-190.467	0/1:221:119,102:119:4276:102:3636:-260.892,0,-316.628	0/0:304:303,1:303:10819:1:36:0,-87.9148,-963.093	0/1:123:58,65:58:2088:65:2317:-171.759,0,-150.125	0/1:190:93,97:93:3329:97:3457:-254.139,0,-241.925	0/0:60:59,1:59:2124:1:36:0,-14.5591,-187.279	0/1:84:45,39:45:1616:39:1404:-101.373,0,-119.614	0/0:125:125,0:125:4443:0:0:0,-37.6287,-397.435	0/0:85:85,0:85:3052:0:0:0,-25.5875,-273.056	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.128	0/1:46:23,23:23:828:23:824:-60.6344,0,-60.3908	0/0:96:96,0:96:3448:0:0:0,-28.8989,-309.098	0/0:49:49,0:49:1764:0:0:0,-14.7505,-158.581	0/1:35:17,18:17:597:18:644:-47.7369,0,-43.3736	0/1:419:251,168:251:8982:168:6035:-417.102,0,-678.233	0/1:200:103,97:103:3692:97:3476:-252.691,0,-270.892	0/0:178:178,0:178:6385:0:0:0,-53.5833,-573.489	0/1:156:85,71:85:3048:71:2537:-181.458,0,-226.803	0/0:195:177,18:177:6325:18:648:0,-0.0820775,-508.777	0/1:117:48,69:48:1716:69:2460:-186.421,0,-119.056	0/0:618:618,0:618:22128:0:0:0,-186.037,-1986.56	0/1:305:159,146:159:5708:146:5183:-374.784,0,-419.284	0/1:42:21,21:21:752:21:756:-55.724,0,-55.2488	0/0:420:420,0:420:15008:0:0:0,-126.433,-1347.74	0/1:510:346,163:346:12360:163:5817:-369.934,0,-954.964	0/0:247:247,0:247:8846:0:0:0,-74.3544,-793.349	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.8047	0/1:22:16,6:16:576:6:212:-12.7988,0,-45.3527	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.4988	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.3777	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.54469	0/0:221:221,0:221:7940:0:0:0,-66.5276,-713.849	0/1:366:202,164:202:7233:164:5865:-417.754,0,-538.727	0/1:39:24,15:24:864:15:540:-37.14,0,-65.9664	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.62291	0/0:511:506,5:506:18172:5:180:0,-137.274,-1614.12	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.1773	0/1:182:74,108:74:2664:108:3872:-293.849,0,-184.345	0/1:75:33,42:33:1180:42:1512:-113.781,0,-83.7183	0/0:91:91,0:91:3246:0:0:0,-27.3937,-291.102	0/1:162:71,91:71:2544:91:3237:-242.784,0,-180.194	0/0:251:251,0:251:8958:0:0:0,-75.5585,-801.707	0/0:434:434,0:434:15505:0:0:0,-130.647,-1389.59	0/1:296:178,118:178:6392:118:4232:-291.949,0,-484.861	0/1:291:175,116:175:6280:116:4126:-283.909,0,-475.649	0/1:245:131,114:131:4700:114:4084:-293.984,0,-348.987	0/1:10:8,2:8:284:2:72:-3.82642,0,-22.8048	0/1:268:128,140:128:4570:140:4964:-366.182,0,-329.12	0/1:77:53,24:53:1904:24:823:-51.2,0,-148.344	0/0:31:31,0:31:1097:0:0:0,-9.33193,-98.1893	0/0:300:300,0:300:10708:0:0:0,-90.309,-959.077	0/1:76:37,39:37:1324:39:1381:-101.701,0,-96.1436	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9493	0/1:27:20,7:20:705:7:244:-14.1716,0,-55.3806	0/1:133:73,60:73:2605:60:2112:-150.275,0,-192.368	0/0:135:134,1:134:4820:1:36:0,-37.0408,-428.662	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.7129	0/1:443:292,151:292:10416:151:5417:-354.285,0,-800.478	0/0:443:442,1:442:15863:1:36:0,-129.758,-1417.86	0/1:143:62,81:62:2228:81:2897:-217.912,0,-157.359	0/0:165:164,1:164:5892:1:36:0,-46.7672,-526.05	0/1:331:168,160:168:6036:160:5706:-414.523,0,-441.328	0/0:131:130,1:130:4664:1:32:0,-36.2356,-415.314	0/1:19:11,8:11:396:8:284:-20.1838,0,-30.2122	0/1:97:54,43:54:1936:43:1536:-109.319,0,-144.323	0/0:107:107,0:107:3806:0:0:0,-32.2102,-341.948	0/0:46:46,0:46:1644:0:0:0,-13.8474,-147.778	0/0:192:192,0:192:6888:0:0:0,-57.7978,-616.805	0/0:205:205,0:205:7287:0:0:0,-61.7111,-651.568	0/0:256:255,1:255:9148:1:36:0,-73.6092,-816.329	0/0:258:258,0:258:9253:0:0:0,-77.6657,-829.381	0/1:228:110,118:110:3929:118:4221:-310.975,0,-282.219	0/1:197:107,90:107:3832:90:3228:-231.371,0,-284.62	0/1:16:10,6:10:345:6:212:-14.6083,0,-26.301	0/1:186:111,75:111:3961:75:2688:-186.167,0,-299.716	0/1:176:82,94:82:2929:94:3372:-250.706,0,-209.653	0/0:315:313,2:313:11256:2:72:0,-87.9877,-1002.71	0/0:105:105,0:105:3734:0:0:0,-31.6081,-334.184	0/0:66:66,0:66:2361:0:0:0,-19.868,-212.325	0/0:95:95,0:95:3393:0:0:0,-28.5978,-304.119	0/1:141:77,64:77:2764:64:2300:-164.803,0,-205.549	0/1:47:23,24:23:828:24:860:-63.5652,0,-59.6973	0/1:80:42,38:42:1512:38:1338:-96.6254,0,-111.569	0/1:67:41,26:41:1472:26:936:-64.3905,0,-112.079	0/1:30:13,17:13:468:17:608:-46.0211,0,-33.2427	0/1:77:42,35:42:1493:35:1252:-89.7966,0,-111.27	0/1:81:26,55:26:936:55:1976:-153.727,0,-59.9355	0/0:266:266,0:266:9541:0:0:0,-80.074,-855.045	0/0:91:90,1:90:3217:1:36:0,-23.7955,-284.905
chr07	4043572	.	GT	AT,AC	185009	PASS	AB=0.485687,0.513555;ABP=12.3964,11.4282;AC=135,53;AF=0.718085,0.281915;AN=188;AO=6133,2714;CIGAR=1X1M,2X;DP=8858;DPB=8858.5;DPRA=0,1.22117;EPP=13320.7,5896.39;EPPR=9.52472;GTI=0;LEN=1,2;MEANALT=1.67021,2.05357;MQM=59.9785,59.9204;MQMR=60;NS=94;NUMALT=2;ODDS=0.35213;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=218856,93908;QR=108;RO=3;RPL=6131,2714;RPP=13303.3,5896.39;RPPR=9.52472;RPR=2,0;RUN=1,1;SAF=6131,2714;SAP=13303.3,5896.39;SAR=2,0;SRF=3;SRP=9.52472;SRR=0;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:42:0,23,19:0:0:23,19:813,648:-119.137,-52.9171,-45.9934,-66.5663,0,-60.8467	1/2:148:0,75,73:0:0:75,73:2688,2553:-427.265,-208.032,-185.454,-219.587,0,-197.612	1/2:128:0,56,72:0:0:56,72:2012,2489:-366.716,-202.573,-185.716,-164.495,0,-142.821	1/2:196:0,94,102:0:0:94,102:3384,3589:-568.635,-292.513,-264.217,-276.477,0,-245.772	1/1:67:0,67,0:0:0:67,0:2400,0:-216.257,-20.169,0,-216.257,-20.169,-216.257	1/1:82:0,82,0:0:0:82,0:2918,0:-262.852,-24.6845,0,-262.852,-24.6845,-262.852	1/1:89:0,89,0:0:0:89,0:3188,0:-287.143,-26.7917,0,-287.143,-26.7917,-287.143	1/2:131:0,75,56:0:0:75,56:2643,1981:-376.887,-161.705,-139.127,-215.536,0,-198.678	1/1:48:0,48,0:0:0:48,0:1724,0:-155.445,-14.4494,0,-155.445,-14.4494,-155.445	1/2:62:0,36,26:0:0:36,26:1292,899:-178.777,-73.3811,-62.544,-105.747,0,-97.9199	1/1:75:0,75,0:0:0:75,0:2662,0:-239.823,-22.5773,0,-239.823,-22.5773,-239.823	1/1:74:0,74,0:0:0:74,0:2650,0:-238.746,-22.2762,0,-238.746,-22.2762,-238.746	1/1:80:0,80,0:0:0:80,0:2847,0:-256.468,-24.0824,0,-256.468,-24.0824,-256.468	1/2:79:0,45,34:0:0:45,34:1607,1159:-225.399,-94.3738,-80.8275,-131.373,0,-121.138	1/2:75:0,34,41:0:0:34,41:1224,1421:-215.717,-115.838,-105.603,-100.232,0,-87.8898	1/2:54:0,29,25:0:0:29,25:1044,860:-155.38,-70.1863,-61.4565,-85.5449,0,-78.0192	1/1:60:0,60,0:0:0:60,0:2133,0:-192.236,-18.0618,0,-192.236,-18.0618,-192.236	1/2:59:0,33,26:0:0:33,26:1184,901:-170.156,-73.5735,-63.6395,-96.9343,0,-89.1075	1/2:79:0,33,46:0:0:33,46:1167,1536:-219.732,-124.674,-114.74,-95.4031,0,-81.5557	1/2:214:0,119,95:0:0:119,95:4268,3308:-617.463,-269.341,-233.518,-348.475,0,-319.877	1/1:145:0,145,0:0:0:145,0:5176,0:-465.979,-43.6494,0,-465.979,-43.6494,-465.979	1/2:102:0,37,65:0:0:37,65:1324,2266:-292.602,-184.633,-173.495,-108.324,0,-88.757	1/2:112:0,62,50:0:0:62,50:2197,1711:-318.2,-139.217,-120.553,-179.33,0,-164.279	1/2:94:0,49,45:0:0:49,45:1756,1571:-271.315,-128.095,-113.344,-143.574,0,-130.027	1/2:62:0,29,33:0:0:29,33:1036,1166:-179.78,-95.3116,-86.5818,-84.824,0,-74.8901	1/1:262:0,261,0:0:0:261,0:9340,0:-840.307,-78.5688,0,-840.307,-78.5688,-840.307	1/1:146:0,146,0:0:0:146,0:5195,0:-467.687,-43.9504,0,-467.687,-43.9504,-467.687	1/1:53:0,53,0:0:0:53,0:1904,0:-171.638,-15.9546,0,-171.638,-15.9546,-171.638	1/2:290:0,119,171:0:0:119,171:4253,5956:-831.446,-484.674,-448.852,-347.125,0,-295.649	1/1:130:0,128,2:0:0:128,2:4604,72:-414.162,-38.5318,0,-408.287,-32.2972,-407.685	1/1:184:0,183,1:0:0:183,1:6546,36:-588.859,-55.0885,0,-585.922,-51.7912,-585.621	1/2:11:0,9,2:0:0:9,2:324,70:-32.4902,-6.04527,-3.336,-26.7966,0,-26.1945	1/1:24:0,24,0:0:0:24,0:849,0:-76.7278,-7.22472,0,-76.7278,-7.22472,-76.7278	1/1:15:0,15,0:0:0:15,0:506,0:-45.8578,-4.51545,0,-45.8578,-4.51545,-45.8578	1/1:20:0,20,0:0:0:20,0:712,0:-64.4067,-6.0206,0,-64.4067,-6.0206,-64.4067	1/2:30:0,17,13:0:0:17,13:608,435:-85.1454,-35.5554,-30.4378,-49.9345,0,-46.0211	1/2:186:0,72,114:0:0:72,114:2588,4061:-542.497,-331.361,-309.687,-211.494,0,-177.177	1/2:151:0,77,74:0:0:77,74:2740,2571:-432.658,-209.359,-186.18,-223.651,0,-201.375	1/2:102:0,48,54:0:0:48,54:1728,1844:-290.985,-149.98,-135.531,-141.356,0,-125.1	1/2:11:0,7,4:0:0:7,4:248,142:-32.1275,-11.9251,-9.81788,-20.557,0,-19.3529	1/2:119:0,48,71:0:0:48,71:1704,2441:-337.41,-198.567,-184.117,-139.194,0,-117.821	1/2:61:0,35,26:0:0:35,26:1244,916:-176.303,-74.9285,-64.3925,-101.728,0,-93.9013	1/2:106:0,51,55:0:0:51,55:1813,1887:-301.271,-153.545,-138.193,-148.075,0,-131.518	1/2:96:1,59,36:1:36:59,36:2101,1240:-268.711,-97.7636,-82.9407,-168.3,0,-160.4	1/2:66:0,38,28:0:0:38,28:1360,971:-190.18,-79.2698,-67.8306,-111.261,0,-102.833	1/1:89:0,89,0:0:0:89,0:3149,0:-283.315,-26.7917,0,-283.315,-26.7917,-283.315	1/1:150:0,150,0:0:0:150,0:5365,0:-482.981,-45.1545,0,-482.981,-45.1545,-482.981	1/2:164:0,72,92:0:0:72,92:2580,3159:-467.262,-256.839,-235.165,-210.775,0,-183.08	1/1:89:0,89,0:0:0:89,0:3185,0:-286.872,-26.7917,0,-286.872,-26.7917,-286.872	1/2:112:0,58,54:0:0:58,54:2061,1880:-321.169,-153.22,-135.76,-168.301,0,-152.045	1/2:128:0,63,65:0:0:63,65:2253,2283:-369.853,-186.142,-167.177,-184.066,0,-164.499	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:122:0,47,75:0:0:47,75:1662,2610:-347.904,-212.54,-198.391,-135.715,0,-113.138	1/1:4:0,4,0:0:0:4,0:140,0:-12.9446,-1.20412,0,-12.9446,-1.20412,-12.9446	1/2:15:0,10,5:0:0:10,5:345,170:-42.1578,-14.1288,-11.1185,-28.3705,0,-26.8654	1/2:136:0,63,73:0:0:63,73:2238,2578:-392.653,-210.292,-191.327,-182.715,0,-160.74	1/2:66:0,34,32:0:0:34,32:1224,1081:-187.835,-87.9512,-77.7161,-100.232,0,-90.5991	1/2:12:0,7,5:0:0:7,5:252,167:-34.4295,-13.8524,-11.7452,-20.9217,0,-19.4166	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:83:0,82,0:0:0:82,0:2925,0:-263.232,-24.6845,0,-263.232,-24.6845,-263.232	1/1:112:0,112,0:0:0:112,0:4016,0:-361.628,-33.7154,0,-361.628,-33.7154,-361.628	1/2:9:0,8,1:0:0:8,1:284,36:-26.4331,-3.29724,-0.889005,-23.4951,0,-23.1941	1/1:194:1,193,0:1:36:193,0:6821,0:-610.35,-54.8015,0,-610.651,-58.0988,-613.588	1/1:105:0,103,2:0:0:103,2:3696,72:-332.48,-31.0061,0,-326.605,-24.7714,-326.003	1/2:70:0,26,43:0:0:26,43:936,1516:-199.927,-123.554,-115.727,-76.4945,0,-63.5502	1/1:82:0,82,0:0:0:82,0:2948,0:-265.553,-24.6845,0,-265.553,-24.6845,-265.553	1/2:192:0,108,84:0:0:108,84:3831,2908:-548.794,-236.671,-204.159,-312.473,0,-287.186	1/2:130:0,51,79:0:0:51,79:1779,2746:-368.274,-223.588,-208.236,-145.034,0,-121.253	1/2:32:0,16,16:0:0:16,16:561,535:-89.3073,-43.649,-38.8325,-46.0006,0,-41.1842	1/1:55:0,55,0:0:0:55,0:1971,0:-177.665,-16.5567,0,-177.665,-16.5567,-177.665	1/2:60:0,29,31:0:0:29,31:1036,1091:-173.636,-89.1664,-80.4365,-84.824,0,-75.4921	1/2:13:0,4,9:0:0:4,9:144,324:-38.5463,-26.7966,-25.5925,-12.1095,0,-9.40023	1/1:93:0,93,0:0:0:93,0:3320,0:-299.016,-27.9958,0,-299.016,-27.9958,-299.016	1/2:67:0,34,33:0:0:34,33:1224,1147:-193.478,-93.5991,-83.3641,-100.232,0,-90.298	1/1:117:0,117,0:0:0:117,0:4148,0:-373.383,-35.2205,0,-373.383,-35.2205,-373.383	1/1:156:0,156,0:0:0:156,0:5574,0:-501.781,-46.9607,0,-501.781,-46.9607,-501.781	1/2:89:0,41,47:0:0:41,47:1468,1659:-254.879,-135.16,-122.817,-119.821,0,-105.673	1/1:89:0,88,0:0:0:88,0:3134,0:-282.054,-26.4906,0,-282.054,-26.4906,-282.054	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:117:1,116,0:1:36:116,0:4125,0:-367.836,-31.6222,0,-368.137,-34.9195,-371.074	1/2:101:0,56,45:0:0:56,45:1985,1560:-288.855,-127.14,-110.283,-162.065,0,-148.519	1/2:218:0,100,118:0:0:100,118:3592,4142:-630.457,-337.43,-307.327,-293.383,0,-257.861	1/2:109:0,53,56:0:0:53,56:1904,1933:-312.714,-157.383,-141.428,-155.683,0,-138.825	1/2:53:0,26,27:0:0:26,27:928,926:-151.182,-75.5203,-67.6935,-76.0115,0,-67.8837	1/1:110:0,110,0:0:0:110,0:3940,0:-354.792,-33.1133,0,-354.792,-33.1133,-354.792	1/2:145:0,75,70:0:0:75,70:2679,2402:-413.787,-195.36,-172.783,-218.776,0,-197.704	1/1:46:0,46,0:0:0:46,0:1640,0:-147.889,-13.8474,0,-147.889,-13.8474,-147.889	1/1:74:0,74,0:0:0:74,0:2637,0:-237.576,-22.2762,0,-237.576,-22.2762,-237.576	1/1:55:0,55,0:0:0:55,0:1976,0:-178.114,-16.5567,0,-178.114,-16.5567,-178.114	1/2:68:0,48,20:0:0:48,20:1716,709:-198.035,-58.1141,-43.6647,-140.276,0,-134.255	1/2:113:0,60,53:0:0:60,53:2145,1817:-322.733,-147.827,-129.765,-175.255,0,-159.3	1/2:185:0,64,120:0:0:64,120:2211,3757:-481.451,-301.8,-282.534,-179.566,0,-143.443	1/1:98:0,96,0:0:0:96,0:3429,0:-308.555,-28.8989,0,-308.555,-28.8989,-308.555	1/1:85:0,85,0:0:0:85,0:3039,0:-273.74,-25.5876,0,-273.74,-25.5876,-273.74
chr07	4146897	.	AAGAGCCACT	TAGAACCACC,AAGAACCACC	245586	PASS	AB=0.477442,0.508603;ABP=35.6336,7.75541;AC=136,52;AF=0.723404,0.276596;AN=188;AO=9258,3765;CIGAR=1X3M1X4M1X,4M1X4M1X;DP=13190;DPB=13190.1;DPRA=0,1.19971;EPP=20106.5,8169.92;EPPR=0;GTI=1;LEN=10,10;MEANALT=3.1383,3.77193;MQM=59.8771,59.9758;MQMR=0;NS=94;NUMALT=2;ODDS=2.8947;PAIRED=0,0;PAIREDR=0;PAO=1.66667,1.66667;PQA=44,44;PQR=0;PRO=0;QA=304996,123983;QR=0;RO=0;RPL=0,1;RPP=20106.5,8169.92;RPPR=0;RPR=9258,3764;RUN=1,1;SAF=9258,3765;SAP=20106.5,8178.6;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:44:0,20,24:0:0:20,24:650,779:-115.651,-63.1889,-57.1683,-52.7866,0,-45.5618	1/2:201:0,91,108:0:0:91,108:3014,3503:-526.445,-282.665,-255.271,-243.794,0,-211.283	1/2:190:0,82,108:0:0:82,108:2713,3518:-503.684,-284.278,-259.593,-219.683,0,-187.171	1/2:365:0,165,189:0:0:165,189:5352,6172:-930.26,-498.412,-448.742,-431.862,0,-374.967	1/1:101:0,100,0:0:0:100,0:3316,0:-298.317,-30.103,0,-298.317,-30.103,-298.317	1/1:58:0,55,0:0:0:55,0:1814,0:-163.221,-16.5567,0,-163.221,-16.5567,-163.221	1/1:242:0,239,1:0:0:239,1:7803,32:-701.971,-71.9462,0,-699.393,-69.3501,-699.092	1/2:136:0,63,72:0:0:63,72:2076,2364:-358.813,-191.041,-172.077,-167.8,0,-146.126	1/1:78:0,78,0:0:0:78,0:2551,0:-229.824,-23.4803,0,-229.824,-23.4803,-229.824	1/2:154:0,83,68:0:0:83,68:2724,2235:-400.685,-180.586,-155.6,-220.073,0,-199.603	1/1:118:0,118,0:0:0:118,0:3867,0:-348.239,-35.5215,0,-348.239,-35.5215,-348.239	1/1:100:0,99,0:0:0:99,0:3235,0:-291.069,-29.802,0,-291.069,-29.802,-291.069	1/1:106:0,106,0:0:0:106,0:3507,0:-315.824,-31.9092,0,-315.824,-31.9092,-315.824	1/2:107:0,49,56:0:0:49,56:1626,1855:-281.595,-150.05,-135.3,-131.555,0,-114.697	1/2:90:0,41,49:0:0:41,49:1352,1605:-239.283,-129.983,-117.641,-109.629,0,-94.8785	1/2:60:0,31,29:0:0:31,29:1043,962:-162.663,-78.1544,-68.8225,-84.8421,0,-76.1122	1/1:96:0,94,0:0:0:94,0:3109,0:-279.728,-28.2968,0,-279.728,-28.2968,-279.728	1/2:77:0,51,24:0:0:51,24:1700,810:-203.263,-65.6699,-50.3174,-137.612,0,-130.388	1/2:62:0,41,20:0:0:41,20:1411,640:-166.214,-51.5996,-39.2573,-114.66,0,-108.639	1/2:418:0,207,203:0:0:207,203:6811,6744:-1096.12,-545.634,-483.321,-550.476,0,-489.367	1/1:208:0,205,0:0:0:205,0:6733,0:-605.609,-61.7112,0,-605.609,-61.7112,-605.609	1/2:188:0,65,122:0:0:65,122:2140,4022:-498.148,-325.173,-305.606,-173.014,0,-136.289	1/2:157:0,77,79:0:0:77,79:2541,2548:-410.87,-205.456,-182.277,-205.411,0,-181.629	1/2:108:0,68,38:0:0:68,38:2253,1273:-285.277,-103.068,-82.5981,-182.184,0,-170.745	1/2:100:0,64,36:0:0:64,36:2091,1205:-266.721,-97.8568,-78.5909,-169.145,0,-158.307	1/1:375:0,366,2:0:0:366,2:12140,64:-1092.25,-110.177,0,-1087.1,-105.022,-1086.5	1/1:199:0,197,0:0:0:197,0:6533,0:-587.484,-59.3029,0,-587.484,-59.3029,-587.484	1/1:35:0,35,0:0:0:35,0:1166,0:-105.234,-10.5361,0,-105.234,-10.5361,-105.234	1/2:334:0,182,149:0:0:182,149:5972,4879:-876.604,-394.083,-339.296,-482.495,0,-437.641	1/1:194:0,186,4:0:0:186,4:6185,135:-556.417,-55.9916,0,-545.476,-45.0393,-544.272	1/1:217:0,215,1:0:0:215,1:7066,32:-635.734,-64.7215,0,-633.155,-62.1278,-632.854	1/2:13:0,5,8:0:0:5,8:166,261:-34.8321,-21.3998,-19.8946,-13.762,0,-11.3538	1/1:11:0,11,0:0:0:11,0:369,0:-33.5348,-3.31133,0,-33.5348,-3.31133,-33.5348	1/1:5:0,5,0:0:0:5,0:160,0:-14.7168,-1.50515,0,-14.7168,-1.50515,-14.7168	1/1:9:0,9,0:0:0:9,0:304,0:-27.6877,-2.70927,0,-27.6877,-2.70927,-27.6877	1/2:15:0,7,8:0:0:7,8:229,244:-38.3588,-19.8518,-17.7446,-18.8237,0,-16.4155	1/2:253:0,123,126:0:0:123,126:4108,4183:-670.999,-338.44,-301.413,-332.585,0,-294.655	1/2:306:0,139,162:0:0:139,162:4626,5339:-805.945,-431.585,-389.742,-374.371,0,-325.604	1/2:111:0,55,54:0:0:55,54:1819,1731:-286.614,-139.508,-122.952,-147.13,0,-130.874	1/2:7:0,2,5:0:0:2,5:67,168:-19.3716,-13.9458,-13.3437,-5.76098,0,-4.25583	1/2:198:0,74,122:0:0:74,122:2435,3963:-516.632,-319.824,-297.548,-196.815,0,-160.089	1/2:72:0,37,35:0:0:37,35:1203,1168:-191.976,-94.8819,-83.7438,-97.424,0,-86.8879	1/2:194:0,82,107:0:0:82,107:2651,3551:-501.109,-287.281,-262.597,-213.832,0,-181.622	1/2:123:0,72,50:0:0:72,50:2359,1649:-323.849,-133.282,-111.607,-190.537,0,-175.486	1/2:78:0,40,37:0:0:40,37:1362,1251:-211.888,-101.391,-89.3502,-110.476,0,-99.3383	1/1:153:0,150,0:0:0:150,0:4862,0:-437.471,-45.1545,0,-437.471,-45.1545,-437.471	1/1:189:0,189,0:0:0:189,0:6270,0:-564.118,-56.8947,0,-564.118,-56.8947,-564.118	1/1:343:0,340,0:0:0:340,0:11140,0:-1002.27,-102.35,0,-1002.27,-102.35,-1002.27	1/1:178:0,177,0:0:0:177,0:5898,0:-530.616,-53.2823,0,-530.616,-53.2823,-530.616	1/2:187:0,90,94:0:0:90,94:2985,3073:-489.62,-248.155,-221.063,-241.438,0,-213.141	1/2:212:0,112,97:0:0:112,97:3684,3202:-556.67,-258.925,-225.21,-297.783,0,-268.583	1/1:24:0,24,0:0:0:24,0:772,0:-69.7818,-7.22472,0,-69.7818,-7.22472,-69.7818	1/2:232:0,123,108:0:0:123,108:4129,3569:-622.966,-288.508,-251.481,-334.451,0,-301.94	1/1:85:0,82,0:0:0:82,0:2715,0:-244.259,-24.6845,0,-244.259,-24.6845,-244.259	1/2:29:0,8,21:0:0:8,21:258,684:-76.3472,-55.5427,-53.1345,-21.1278,0,-14.8061	1/2:252:0,96,150:0:0:96,150:3119,4958:-652.39,-400.932,-372.033,-251.465,0,-206.311	1/2:60:0,28,31:0:0:28,31:944,1040:-160.809,-84.3052,-75.8764,-76.5763,0,-67.2444	1/2:16:0,7,8:0:0:7,8:230,276:-41.0251,-22.4443,-20.3371,-18.5942,0,-16.186	1/1:12:0,12,0:0:0:12,0:409,0:-37.1375,-3.61236,0,-37.1375,-3.61236,-37.1375	1/1:108:0,107,0:0:0:107,0:3523,0:-317.009,-32.2102,0,-317.009,-32.2102,-317.009	1/1:150:0,145,3:0:0:145,3:4806,91:-432.399,-43.6494,0,-425.115,-36.3828,-424.211	1/2:12:0,3,4:0:0:3,4:100,121:-17.7529,-9.65869,-8.7556,-8.08513,0,-6.88101	1/1:283:0,278,0:0:0:278,0:9266,0:-833.546,-83.6863,0,-833.546,-83.6863,-833.546	1/1:206:0,203,0:0:0:203,0:6655,0:-598.771,-61.1091,0,-598.771,-61.1091,-598.771	1/2:136:0,67,68:0:0:67,68:2202,2198:-355.198,-177.25,-157.081,-177.914,0,-157.444	1/1:149:0,148,0:0:0:148,0:4804,0:-432.175,-44.5524,0,-432.175,-44.5524,-432.175	1/2:285:0,142,141:0:0:142,141:4648,4610:-747.769,-372.355,-329.609,-375.45,0,-333.004	1/2:192:0,40,148:0:0:40,148:1340,4867:-501.853,-393.334,-381.293,-108.534,0,-63.9812	1/2:45:0,26,19:0:0:26,19:886,649:-124.875,-53.0085,-45.1818,-72.2072,0,-66.4877	1/1:132:0,131,0:0:0:131,0:4203,0:-378.218,-39.4349,0,-378.218,-39.4349,-378.218	1/2:96:0,55,40:0:0:55,40:1799,1317:-251.763,-106.459,-89.9028,-145.311,0,-133.27	1/2:40:0,22,18:0:0:22,18:706,583:-104.256,-47.359,-40.7363,-57.2195,0,-51.801	1/1:141:0,140,0:0:0:140,0:4572,0:-411.365,-42.1442,0,-411.365,-42.1442,-411.365	1/2:73:0,32,41:0:0:32,41:1052,1305:-190.354,-105.333,-95.7005,-85.3448,0,-73.0025	1/1:197:0,194,0:0:0:194,0:6308,0:-567.538,-58.3998,0,-567.538,-58.3998,-567.538	1/1:252:0,246,0:0:0:246,0:8122,0:-730.506,-74.0534,0,-730.506,-74.0534,-730.506	1/2:129:0,54,71:0:0:54,71:1802,2305:-331.892,-186.022,-169.767,-145.89,0,-124.517	1/1:156:0,154,0:0:0:154,0:5060,0:-455.252,-46.3586,0,-455.252,-46.3586,-455.252	1/1:15:0,15,0:0:0:15,0:514,0:-46.5839,-4.51545,0,-46.5839,-4.51545,-46.5839	1/1:169:0,167,0:0:0:167,0:5533,0:-497.849,-50.272,0,-497.849,-50.272,-497.849	1/2:232:0,118,111:0:0:118,111:3868,3700:-612.008,-299.522,-264.001,-312.534,0,-279.12	1/2:284:0,147,134:0:0:147,134:4823,4396:-744.843,-355.199,-310.947,-389.669,0,-349.331	1/2:128:0,59,66:0:0:59,66:1954,2237:-339.427,-181.386,-163.625,-158.036,0,-138.168	1/2:113:0,68,44:0:0:68,44:2268,1493:-304.674,-121.094,-100.624,-183.596,0,-170.351	1/1:149:0,149,0:0:0:149,0:4908,0:-441.913,-44.8535,0,-441.913,-44.8535,-441.913	1/2:170:0,84,84:0:0:84,84:2798,2784:-451.618,-225.166,-199.88,-226.43,0,-201.143	1/1:69:0,69,0:0:0:69,0:2317,0:-208.792,-20.7711,0,-208.792,-20.7711,-208.792	1/1:114:0,114,0:0:0:114,0:3744,0:-337.184,-34.3174,0,-337.184,-34.3174,-337.184	1/1:122:0,121,0:0:0:121,0:3919,0:-352.684,-36.4246,0,-352.684,-36.4246,-352.684	1/2:68:0,29,39:0:0:29,39:936,1331:-183.788,-108.347,-99.6169,-75.7714,0,-64.0312	1/2:138:0,65,72:0:0:65,72:2133,2427:-369.009,-196.706,-177.139,-172.326,0,-150.651	1/2:91:0,33,57:0:0:33,57:1105,1882:-241.619,-152.136,-142.202,-89.4568,0,-72.2981	1/1:126:0,126,0:0:0:126,0:4134,0:-372.277,-37.9298,0,-372.277,-37.9298,-372.277	1/1:135:0,135,0:0:0:135,0:4421,0:-398.087,-40.6391,0,-398.087,-40.6391,-398.087
chr07	4169825	.	T	C	296594	PASS	AB=0.39301;ABP=1163.71;AC=136;AF=0.723404;AN=188;AO=11530;CIGAR=1X;DP=18641;DPB=18641;DPRA=0;EPP=25031.4;EPPR=15427;GTI=6;LEN=1;MEANALT=1.04255;MQM=59.9522;MQMR=57.6465;NS=94;NUMALT=1;ODDS=13.4753;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=410127;QR=253954;RO=7107;RPL=5570;RPP=31.6557;RPPR=2535.52;RPR=5960;RUN=1;SAF=5571;SAP=31.3626;SAR=5959;SRF=2115;SRP=2532;SRR=4992;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:85:49,36:49:1752:36:1274:-89.3739,0,-131.678	0/1:307:161,146:161:5776:146:5181:-374.015,0,-426.322	0/1:308:166,142:166:5936:142:5066:-363.369,0,-440.594	0/1:515:301,214:301:10737:214:7632:-531.88,0,-806.663	1/1:150:0,150:0:0:150:5354:-481.965,-45.1545,0	1/1:123:3,119:3:108:119:4226:-370.436,-26.8979,0	1/1:262:1,261:1:36:261:9252:-828.97,-75.2716,0	0/1:366:221,145:221:7932:145:5157:-353.901,0,-601.921	1/1:193:0,193:0:0:193:6835:-614.852,-58.0988,0	0/1:287:195,92:195:6980:92:3281:-209.114,0,-541.666	1/1:130:0,130:0:0:130:4643:-418.033,-39.1339,0	1/1:130:0,130:0:0:130:4607:-414.775,-39.1339,0	1/1:152:0,152:0:0:152:5395:-485.666,-45.7566,0	0/1:165:118,47:118:4236:47:1654:-99.4734,0,-330.329	0/1:192:104,88:104:3740:88:3160:-226.826,0,-277.656	0/1:153:100,53:100:3584:53:1900:-125.22,0,-276.549	1/1:166:0,166:0:0:166:5936:-534.34,-49.971,0	0/1:165:99,66:99:3535:66:2350:-162.086,0,-268.419	0/1:115:68,47:68:2444:47:1665:-115.517,0,-185.405	0/1:401:217,184:217:7763:184:6498:-464.195,0,-577.671	1/1:216:0,216:0:0:216:7683:-691.507,-65.0225,0	0/1:96:48,48:48:1720:48:1700:-124.314,0,-126.164	0/1:195:132,62:132:4719:62:2220:-141.305,0,-365.945	0/1:326:183,143:183:6521:143:5083:-359.434,0,-488.466	0/1:119:71,48:71:2535:48:1711:-118.452,0,-192.374	1/1:467:0,467:0:0:467:16659:-1498.97,-140.581,0	1/1:341:1,340:1:36:340:12114:-1086.52,-99.053,0	1/1:84:0,84:0:0:84:2985:-268.882,-25.2865,0	0/1:489:275,214:275:9819:214:7648:-541.152,0,-735.642	1/1:213:9,204:9:324:204:7234:-621.903,-34.9094,0	1/1:176:0,176:0:0:176:6265:-563.944,-52.9813,0	0/1:25:20,5:20:720:5:172:-8.29222,0,-57.2917	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:34:19,15:19:684:15:523:-37.1634,0,-51.5734	0/1:463:260,203:260:9265:203:7181:-506.941,0,-693.813	0/1:270:178,92:178:6350:92:3284:-214.433,0,-488.999	0/1:202:134,68:134:4780:68:2388:-154.358,0,-367.43	0/1:22:14,8:14:496:8:288:-19.6447,0,-38.2942	0/1:326:173,153:173:6185:153:5431:-390.786,0,-456.785	0/1:111:75,36:75:2673:36:1266:-80.8268,0,-206.902	0/1:312:186,126:186:6644:126:4490:-310.348,0,-502.776	0/1:187:122,64:122:4372:64:2283:-149.46,0,-337.191	0/1:152:93,59:93:3273:59:2073:-141.083,0,-248.955	1/1:112:0,112:0:0:112:4024:-362.346,-33.7154,0	1/1:235:0,234:0:0:234:8296:-746.294,-70.441,0	1/1:293:1,292:1:36:292:10364:-929.082,-84.6035,0	1/1:191:0,191:0:0:191:6812:-613.152,-57.4967,0	0/1:322:196,126:196:7020:126:4499:-308.148,0,-533.989	0/1:431:259,172:259:9250:172:6117:-420.887,0,-701.947	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	0/1:369:214,155:214:7639:155:5512:-385.127,0,-575.047	1/1:72:0,72:0:0:72:2571:-231.638,-21.6742,0	0/1:26:10,16:10:360:16:537:-40.8182,0,-24.8625	0/1:316:208,108:208:7417:108:3850:-251.571,0,-571.762	0/1:140:104,36:104:3732:36:1273:-72.7277,0,-293.844	0/1:19:6,13:6:216:13:468:-36.7401,0,-14.0675	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	1/1:120:0,120:0:0:120:4271:-384.559,-36.1236,0	1/1:208:0,208:0:0:208:7410:-666.945,-62.6142,0	0/1:14:4,10:4:144:10:356:-28.1668,0,-9.092	1/1:223:0,223:0:0:223:7934:-714.083,-67.1297,0	1/1:352:4,348:4:144:348:12437:-1105.85,-92.6489,0	0/1:191:127,64:127:4536:64:2288:-148.685,0,-349.713	1/1:168:0,168:0:0:168:5937:-534.442,-50.573,0	0/1:343:213,130:213:7620:130:4655:-315.858,0,-582.279	0/1:253:184,69:184:6586:69:2455:-145.032,0,-516.466	0/1:86:52,34:52:1859:34:1216:-83.858,0,-141.131	1/1:159:0,159:0:0:159:5662:-509.682,-47.8638,0	0/1:250:148,102:148:5312:102:3617:-250.476,0,-402.697	0/1:31:21,10:21:722:10:341:-21.6858,0,-55.9303	1/1:134:0,134:0:0:134:4716:-424.6,-40.338,0	0/1:177:107,70:107:3782:70:2520:-173.769,0,-284.476	1/1:315:0,315:0:0:315:11155:-1003.8,-94.8245,0	1/1:276:1,275:1:36:275:9803:-878.623,-79.4897,0	0/1:217:126,91:126:4508:91:3241:-226.587,0,-340.278	1/1:207:1,206:1:32:206:7387:-661.675,-59.1139,0	1/1:18:0,18:0:0:18:620:-56.1201,-5.41854,0	1/1:237:0,237:0:0:237:8450:-760.502,-71.3441,0	0/1:260:139,121:139:4984:121:4313:-310.079,0,-370.004	0/1:587:376,211:376:13424:211:7544:-502.295,0,-1029.27	0/1:264:163,101:163:5821:101:3587:-243.565,0,-443.865	0/1:177:109,68:109:3898:68:2433:-165.941,0,-297.595	1/1:162:0,162:0:0:162:5738:-516.535,-48.7669,0	0/1:315:188,127:188:6740:127:4507:-310.975,0,-511.343	1/1:90:0,90:0:0:90:3192:-287.501,-27.0927,0	1/1:112:0,112:0:0:112:3928:-353.706,-33.7154,0	1/1:108:1,107:1:32:107:3813:-340.168,-29.3119,0	0/1:118:82,36:82:2912:36:1284:-80.3419,0,-226.054	0/1:203:135,68:135:4823:68:2411:-156.138,0,-371.724	0/1:177:131,46:131:4658:46:1652:-95.6852,0,-365.797	1/1:75:1,74:1:36:74:2612:-231.729,-18.9816,0	1/1:216:0,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chr07	4169833	.	CC	CT,AT	492336	PASS	AB=0.781045,0.217765;ABP=8074.61,8143.1;AC=137,51;AF=0.728723,0.271277;AN=188;AO=16337,2585;CIGAR=1M1X,2X;DP=18948;DPB=18948;DPRA=0,1.49461;EPP=35469.7,5616.27;EPPR=39.9253;GTI=9;LEN=1,2;MEANALT=1.71277,2.1;MQM=59.9495,53.3954;MQMR=60;NS=94;NUMALT=2;ODDS=1.17771;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=580950,91103;QR=560;RO=17;RPL=7665,13;RPP=137.795,5503.92;RPPR=4.1599;RPR=8672,2572;RUN=1,1;SAF=7666,13;SAP=137.26,5503.92;SAR=8671,2572;SRF=10;SRP=4.1599;SRR=7;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:89:0,70,19:0:0:70,19:2484,680:-257.378,-54.9893,-33.9172,-202.742,0,-197.023	1/2:311:0,235,76:0:0:235,76:8379,2706:-902.921,-219.91,-149.168,-683.365,0,-660.487	1/2:313:0,245,67:0:0:245,67:8661,2365:-896.979,-191.597,-117.845,-705.374,0,-685.205	1/2:527:0,413,114:0:0:413,114:14716,4042:-1526.64,-328.241,-203.915,-1198.76,0,-1164.44	1/1:156:0,156,0:0:0:156,0:5555,0:-500.063,-46.9607,0,-500.063,-46.9607,-500.063	1/1:122:0,122,0:0:0:122,0:4344,0:-391.031,-36.7257,0,-391.031,-36.7257,-391.031	1/1:272:0,270,2:0:0:270,2:9541,48:-858.4,-81.2781,0,-854.683,-77.3205,-854.081	1/2:371:0,268,103:0:0:268,103:9535,3649:-1072.8,-295.726,-215.05,-777.432,0,-746.426	1/1:197:0,197,0:0:0:197,0:6937,0:-623.77,-59.3029,0,-623.77,-59.3029,-623.77	1/2:291:0,215,76:0:0:215,76:7652,2676:-841.653,-218.018,-153.296,-623.987,0,-601.109	1/1:129:0,129,0:0:0:129,0:4592,0:-413.448,-38.8329,0,-413.448,-38.8329,-413.448	1/1:131:0,131,0:0:0:131,0:4650,0:-418.658,-39.4349,0,-418.658,-39.4349,-418.658	1/1:158:1,157,0:1:26:157,0:5558,0:-497.735,-44.9629,0,-498.036,-47.2617,-500.074	1/2:167:0,122,45:0:0:122,45:4338,1577:-480.831,-127.339,-90.6137,-353.841,0,-340.295	1/2:194:0,152,42:0:0:152,42:5423,1485:-562.625,-120.532,-74.7759,-442.445,0,-429.801	1/2:158:0,129,29:0:0:129,29:4556,1038:-455.878,-84.8623,-46.0294,-371.373,0,-362.643	1/1:165:1,164,0:1:36:164,0:5793,0:-517.889,-46.0717,0,-518.19,-49.3689,-521.127	1/2:167:0,137,30:0:0:137,30:4874,1065:-484.08,-86.865,-45.6239,-397.569,0,-388.538	1/2:115:0,90,25:0:0:90,25:3201,898:-334.276,-73.4136,-46.3209,-261.22,0,-253.694	1/2:408:3,360,44:3:86:360,44:12849,1550:-1165.48,-118.908,-17.3687,-1040.69,0,-1034.28	1/1:220:0,219,1:0:0:219,1:7766,25:-698.716,-65.9256,0,-696.768,-63.7267,-696.467	1/1:98:0,90,7:0:0:90,7:3220,252:-289.677,-27.0927,0,-269.137,-6.45045,-267.03	1/2:197:0,163,34:0:0:163,34:5760,1209:-567.875,-98.7913,-49.7234,-469.439,0,-459.204	1/2:333:0,274,59:0:0:274,59:9777,2088:-966.643,-169.646,-87.1639,-797.35,0,-779.59	1/2:120:0,105,15:0:0:105,15:3733,538:-348.24,-44.0362,-12.428,-304.561,0,-300.045	1/1:472:0,471,0:0:0:471,0:16787,0:-1510.19,-141.785,0,-1510.19,-141.785,-1510.19	1/1:350:0,350,0:0:0:350,0:12425,0:-1118.09,-105.361,0,-1118.09,-105.361,-1118.09	1/1:84:0,84,0:0:0:84,0:2992,0:-269.513,-25.2865,0,-269.513,-25.2865,-269.513	1/2:499:0,412,87:0:0:412,87:14684,3073:-1446.79,-249.87,-125.846,-1197.28,0,-1171.09	1/1:213:2,203,8:2:72:203,8:7206,260:-641.789,-55.2266,0,-621.633,-40.3808,-625.1	1/1:178:0,178,0:0:0:178,0:6342,0:-570.871,-53.5833,0,-570.871,-53.5833,-570.871	1/2:26:0,19,7:0:0:19,7:675,250:-75.4311,-20.4267,-14.7071,-55.3573,0,-53.2501	1/1:22:0,22,0:0:0:22,0:788,0:-71.2448,-6.62266,0,-71.2448,-6.62266,-71.2448	1/1:6:0,6,0:0:0:6,0:212,0:-19.4248,-1.80618,0,-19.4248,-1.80618,-19.4248	1/1:6:0,6,0:0:0:6,0:212,0:-19.4248,-1.80618,0,-19.4248,-1.80618,-19.4248	1/2:33:0,23,10:0:0:23,10:820,360:-96.4924,-29.6517,-22.728,-67.1988,0,-64.1885	1/2:472:0,386,86:0:0:386,86:13743,3043:-1367.17,-247.413,-131.215,-1120.11,0,-1094.23	1/2:278:0,181,97:0:0:181,97:6430,3425:-802.041,-278.093,-223.606,-524.301,0,-495.101	1/2:205:0,154,51:0:0:154,51:5467,1779:-588.331,-142.881,-96.5226,-445.796,0,-430.444	1/2:22:0,9,13:0:0:9,13:324,441:-62.4963,-36.0509,-33.3416,-26.7966,0,-22.8832	1/2:335:1,265,69:1:36:265,69:9455,2416:-962.297,-191.809,-114.974,-767.841,0,-750.008	1/2:112:0,87,25:0:0:87,25:3096,890:-324.632,-72.3093,-46.1197,-252.677,0,-245.151	1/2:323:0,247,75:0:0:247,75:8815,2640:-932.832,-214.2,-139.846,-718.733,0,-696.155	1/2:192:1,158,33:1:36:158,33:5668,1165:-553.709,-91.6882,-47.0631,-459.378,0,-452.381	1/2:153:0,122,31:0:0:122,31:4299,1068:-436.801,-86.7909,-50.0653,-350.355,0,-341.023	1/1:115:0,115,0:0:0:115,0:4098,0:-369.005,-34.6185,0,-369.005,-34.6185,-369.005	1/1:238:0,238,0:0:0:238,0:8450,0:-760.507,-71.6451,0,-760.507,-71.6451,-760.507	1/1:300:0,299,1:0:0:299,1:10615,23:-955.033,-90.008,0,-953.265,-88.0092,-952.964	1/1:193:0,192,1:0:0:192,1:6846,23:-615.979,-57.7978,0,-614.211,-55.7989,-613.91	1/2:322:0,229,93:0:0:229,93:8191,3300:-936.408,-268.498,-199.562,-668.265,0,-640.269	1/2:436:0,356,80:0:0:356,80:12706,2830:-1265.91,-230.197,-123.031,-1036.07,0,-1011.99	1/1:29:0,29,0:0:0:29,0:1025,0:-92.5607,-8.72987,0,-92.5607,-8.72987,-92.5607	1/2:371:0,287,84:0:0:287,84:10178,2991:-1071.75,-242.54,-156.145,-829.561,0,-804.274	1/1:70:0,70,0:0:0:70,0:2507,0:-225.882,-21.0721,0,-225.882,-21.0721,-225.882	1/2:26:0,20,6:0:0:20,6:701,216:-74.9632,-17.9289,-11.90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chr07	4169839	.	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chr07	4169846	.	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chr07	5449150	.	T	A	38464.5	PASS	AB=0.526443;ABP=30.6867;AC=54;AF=0.287234;AN=188;AO=2412;CIGAR=1X;DP=8152;DPB=8152;DPRA=1.0334;EPP=5240.6;EPPR=12456.4;GTI=1;LEN=1;MEANALT=1.05172;MQM=44.1161;MQMR=56.9604;NS=94;NUMALT=1;ODDS=3.80595;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=85726;QR=204806;RO=5735;RPL=0;RPP=5240.6;RPPR=12456.4;RPR=2412;RUN=1;SAF=2412;SAP=5240.6;SAR=0;SRF=5735;SRP=12456.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:66:27,39:27:964:39:1400:-95.1797,0,-66.6421	0/1:79:40,38:40:1432:38:1334:-86.8365,0,-104.449	0/1:116:48,68:48:1697:68:2398:-159.809,0,-117.343	0/1:161:85,76:85:3040:76:2721:-192.632,0,-224.529	0/0:68:68,0:68:2420:0:0:0,-20.47,-217.293	0/0:109:109,0:109:3897:0:0:0,-32.8123,-348.696	0/0:102:102,0:102:3633:0:0:0,-30.7051,-327.044	0/1:115:70,45:70:2496:45:1620:-99.4019,0,-189.082	0/0:109:109,0:109:3839:0:0:0,-32.8123,-342.331	0/1:69:30,39:30:1061:39:1396:-102.033,0,-75.0283	0/0:34:34,0:34:1205:0:0:0,-10.235,-108.711	0/0:57:57,0:57:2044:0:0:0,-17.1587,-183.438	0/0:61:61,0:61:2184:0:0:0,-18.3628,-195.84	0/1:37:14,23:14:489:23:824:-61.4341,0,-33.1835	0/1:58:26,32:26:936:32:1152:-85.1727,0,-67.0343	0/1:56:28,28:28:1004:28:1008:-71.6299,0,-73.0892	0/0:69:69,0:69:2468:0:0:0,-20.7711,-220.8	0/1:43:21,22:21:752:22:792:-51.1952,0,-54.8662	0/1:26:7,19:7:248:19:680:-47.4361,0,-14.6597	0/1:191:89,102:89:3169:102:3611:-264.187,0,-227.143	0/0:120:120,0:120:4304:0:0:0,-36.1236,-385.846	0/1:131:22,109:22:788:109:3863:-305.268,0,-31.5215	0/1:87:42,45:42:1496:45:1530:-110.276,0,-107.933	0/1:132:74,58:74:2648:58:2065:-141.715,0,-198.701	0/1:25:17,8:17:612:8:288:-18.2316,0,-47.8877	0/0:321:321,0:321:11516:0:0:0,-96.6306,-1035.69	0/0:233:233,0:233:8318:0:0:0,-70.14,-748.127	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:267:144,123:144:5157:123:4409:-312.033,0,-383.452	0/0:123:118,5:118:4179:5:172:0,-21.6134,-360.22	0/0:140:140,0:140:5024:0:0:0,-42.1442,-451.72	0/1:16:5,11:5:176:11:381:-29.1235,0,-11.3685	0/0:28:27,1:27:964:1:36:0,-4.88032,-83.4346	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.4978	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.8693	0/1:18:7,11:7:252:11:381:-26.472,0,-17.5349	0/1:153:75,78:75:2696:78:2774:-202.264,0,-196.694	0/1:168:80,88:80:2823:88:3156:-228.464,0,-202.861	0/1:44:17,26:17:600:26:936:-64.8479,0,-40.7386	1/1:4:0,4:0:0:4:144:-12.8987,-1.20412,0	0/1:97:49,48:49:1741:48:1694:-119.079,0,-127.042	0/1:36:18,18:18:644:18:640:-45.8868,0,-47.425	0/1:157:86,71:86:3069:71:2525:-175.826,0,-228.947	0/1:50:24,26:24:860:26:917:-67.0815,0,-62.6703	0/1:52:22,30:22:773:30:1061:-78.0876,0,-54.2075	0/0:157:157,0:157:5640:0:0:0,-47.2617,-507.634	0/0:98:98,0:98:3516:0:0:0,-29.5009,-314.642	0/1:117:62,55:62:2204:55:1944:-137.682,0,-163.332	0/0:64:64,0:64:2288:0:0:0,-19.2659,-205.859	0/1:161:92,69:92:3273:69:2480:-172.622,0,-245.441	0/1:167:80,87:80:2857:87:3094:-224.945,0,-207.024	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1377	0/1:106:57,49:57:2044:49:1756:-110.428,0,-151.715	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.371	0/1:25:14,11:14:481:11:392:-25.2422,0,-35.9627	0/1:108:43,65:43:1540:65:2321:-172.844,0,-106.239	0/1:26:13,13:13:468:13:468:-34.2616,0,-34.6043	0/1:14:4,10:4:140:10:356:-27.989,0,-8.73016	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7519	0/0:72:71,1:71:2536:1:36:0,-18.138,-224.881	0/0:105:105,0:105:3760:0:0:0,-31.6081,-338.266	0/1:5:1,4:1:36:4:144:-11.6921,0,-2.09312	0/0:165:165,0:165:5905:0:0:0,-49.6699,-531.469	0/0:234:232,1:232:8293:1:36:0,-66.9299,-742.293	0/1:67:33,34:33:1184:34:1201:-84.9807,0,-86.4184	0/0:88:86,0:86:3042:0:0:0,-25.8886,-273.503	0/1:162:66,96:66:2341:96:3388:-253.204,0,-161.995	0/1:100:21,79:21:737:79:2765:-216.386,0,-36.5476	0/1:13:5,8:5:180:8:273:-20.2236,0,-12.6304	0/0:62:62,0:62:2224:0:0:0,-18.6639,-199.194	0/1:80:45,35:45:1593:35:1256:-87.5575,0,-119.535	0/1:19:9,10:9:324:10:360:-26.1497,0,-23.7576	0/0:93:93,0:93:3309:0:0:0,-27.9958,-295.673	0/1:34:10,24:10:360:24:849:-60.3002,0,-22.402	0/0:85:85,0:85:3029:0:0:0,-25.5875,-272.622	0/0:123:123,0:123:4408:0:0:0,-37.0267,-396.712	0/1:163:89,74:89:3150:74:2592:-162.767,0,-233.246	0/0:89:89,0:89:3192:0:0:0,-26.7917,-286.224	0/0:38:38,0:38:1333:0:0:0,-11.4391,-119.243	0/0:75:74,1:74:2644:1:36:0,-19.0287,-234.358	0/1:119:54,65:54:1940:65:2313:-154.957,0,-138.44	0/1:243:110,133:110:3944:133:4739:-347.115,0,-281.591	0/1:87:41,46:41:1464:46:1633:-119.166,0,-105.537	0/1:43:18,25:18:636:25:900:-67.3513,0,-44.5906	0/0:61:61,0:61:2173:0:0:0,-18.3628,-195.744	0/1:92:50,42:50:1788:42:1489:-104.37,0,-133.258	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.1937	0/0:56:56,0:56:2012:0:0:0,-16.8577,-180.641	0/0:65:65,0:65:2332:0:0:0,-19.5669,-209.072	0/1:31:11,20:11:392:20:720:-54.9053,0,-26.2429	0/1:73:46,27:46:1652:27:953:-62.6788,0,-126.991	0/1:52:15,37:15:540:37:1324:-102.679,0,-33.2653	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.365	0/0:66:66,0:66:2360:0:0:0,-19.868,-212.09
chr07	6117735	.	G	C	129467	PASS	AB=0.484727;ABP=26.8222;AC=52;AF=0.276596;AN=188;AO=5726;CIGAR=1X;DP=20968;DPB=20968;DPRA=1.19408;EPP=12436.9;EPPR=33068;GTI=0;LEN=1;MEANALT=1.1129;MQM=59.9976;MQMR=59.9893;NS=94;NUMALT=1;ODDS=9.27229;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=204079;QR=542749;RO=15231;RPL=2948;RPP=13.9701;RPPR=517.144;RPR=2778;RUN=1;SAF=2948;SAP=13.9701;SAR=2778;SRF=8566;SRP=518.227;SRR=6665;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:114:61,53:61:2188:53:1900:-136.96,0,-162.868	0/1:304:165,139:165:5886:139:4983:-357.104,0,-438.336	0/1:457:264,193:264:9349:193:6857:-479.631,0,-703.809	0/1:450:214,236:214:7656:236:8460:-625.937,0,-553.613	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/0:122:122,0:122:4352:0:0:0,-36.7257,-391.856	0/0:333:332,0:332:11828:0:0:0,-99.942,-1064.02	0/1:370:211,159:211:7551:159:5643:-396.612,0,-568.249	0/0:285:285,0:285:10129:0:0:0,-85.7935,-911.546	0/1:186:89,96:89:3180:96:3399:-250.074,0,-230.374	0/0:138:137,0:137:4866:0:0:0,-41.2411,-437.734	0/0:176:176,0:176:6232:0:0:0,-52.9813,-560.979	0/0:172:172,0:172:6139:0:0:0,-51.7772,-552.611	0/1:142:75,66:75:2639:66:2359:-169.764,0,-194.951	0/1:181:88,93:88:3117:93:3314:-243.992,0,-226.271	0/1:139:69,70:69:2450:70:2485:-182.059,0,-178.911	0/0:143:143,0:143:5081:0:0:0,-43.0473,-457.437	0/0:127:127,0:127:4543:0:0:0,-38.2308,-409.036	0/1:104:66,38:66:2349:38:1360:-91.3935,0,-180.36	0/1:464:223,241:223:7971:241:8599:-634.228,0,-577.699	0/0:395:395,0:395:14008:0:0:0,-118.907,-1260.26	0/1:165:49,116:49:1737:116:4143:-323.384,0,-106.942	0/0:205:203,1:203:7219:1:36:0,-58.1717,-646.167	0/1:227:136,91:136:4856:91:3262:-225.466,0,-368.859	0/1:202:105,97:105:3759:97:3445:-249.455,0,-277.701	0/1:634:356,278:356:12704:278:9854:-695.955,0,-952.332	0/0:702:702,0:702:25087:0:0:0,-211.323,-2257.12	0/0:59:59,0:59:2105:0:0:0,-17.7608,-189.717	0/1:474:243,231:243:8667:231:8254:-600.181,0,-637.336	0/0:349:339,10:339:12140:10:360:0,-72.3152,-1059.7	0/0:318:317,1:317:11222:1:36:0,-92.1293,-1006.27	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/0:46:46,0:46:1640:0:0:0,-13.8474,-147.889	0/0:11:11,0:11:388:0:0:0,-3.31133,-35.2574	0/1:20:11,9:11:396:9:320:-23.1218,0,-29.9621	0/1:19:9,10:9:324:10:360:-27.0247,0,-23.7863	0/1:353:191,162:191:6782:162:5811:-416.837,0,-504.193	0/1:297:151,146:151:5382:146:5197:-378.465,0,-395.105	0/1:100:50,50:50:1783:50:1791:-131.37,0,-130.649	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:310:147,163:147:5247:163:5836:-432.033,0,-379.049	0/1:63:30,33:30:1058:33:1179:-87.4523,0,-76.5647	0/1:386:201,185:201:7161:185:6601:-477.964,0,-528.352	0/1:170:92,78:92:3264:78:2784:-199.626,0,-242.805	0/1:121:57,63:57:2026:63:2255:-166.729,0,-146.128	0/0:252:252,0:252:8982:0:0:0,-75.8596,-808.359	0/0:315:315,0:315:11234:0:0:0,-94.8244,-1010.95	0/1:405:195,210:195:6964:210:7501:-553.217,0,-504.907	0/0:274:272,2:272:9694:2:72:0,-75.6455,-865.576	0/1:297:144,153:144:5160:153:5465:-402.572,0,-375.124	0/1:335:170,165:170:6075:165:5845:-425.319,0,-446.005	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:296:177,119:177:6334:119:4238:-292.496,0,-481.037	0/0:146:146,0:146:5168:0:0:0,-43.9504,-465.247	0/1:30:13,17:13:468:17:612:-46.3825,0,-33.4287	0/1:318:151,167:151:5375:167:5947:-439.614,0,-388.154	0/1:114:54,60:54:1928:60:2127:-157.38,0,-139.479	0/1:18:13,5:13:468:5:180:-11.1335,0,-37.0411	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:227:225,1:225:7983:1:36:0,-64.7943,-714.898	0/0:210:210,0:210:7490:0:0:0,-63.2163,-674.145	0/1:23:10,13:10:356:13:468:-35.536,0,-25.4576	0/0:422:422,0:422:15051:0:0:0,-127.035,-1354.32	0/0:438:430,7:430:15338:7:252:0,-108.881,-1357.11	0/1:164:88,76:88:3152:76:2704:-194.235,0,-234.536	0/0:208:208,0:208:7432:0:0:0,-62.6142,-668.925	0/1:676:361,315:361:12866:315:11105:-795.852,0,-954.266	0/1:277:97,180:97:3480:180:6432:-495.581,0,-230.025	0/1:78:39,39:39:1400:39:1379:-100.928,0,-102.819	0/0:229:228,0:228:8114:0:0:0,-68.6348,-729.889	0/1:122:58,64:58:2054:64:2284:-169.096,0,-148.402	0/1:56:38,18:38:1346:18:639:-40.9806,0,-104.581	0/0:235:234,0:234:8320:0:0:0,-70.441,-748.491	0/1:179:96,83:96:3387:83:2969:-213.557,0,-251.159	0/0:470:470,0:470:16711:0:0:0,-141.484,-1503.65	0/0:417:417,0:417:14898:0:0:0,-125.53,-1340.55	0/1:141:85,56:85:3030:56:2002:-138.008,0,-230.485	0/0:289:286,3:286:10215:3:108:0,-76.9225,-909.203	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/0:255:254,1:254:9010:1:36:0,-73.1644,-807.284	0/1:325:161,164:161:5749:164:5838:-427.701,0,-419.691	0/1:466:256,209:256:9141:209:7467:-531.734,0,-682.326	0/1:147:71,76:71:2531:76:2708:-199.713,0,-183.789	0/1:147:74,73:74:2613:73:2607:-190.626,0,-191.167	0/0:150:150,0:150:5353:0:0:0,-45.1545,-481.903	0/1:251:135,116:135:4804:116:4117:-295.158,0,-356.958	0/0:78:78,0:78:2765:0:0:0,-23.4803,-249.091	0/0:160:160,0:160:5709:0:0:0,-48.1648,-513.928	0/0:173:173,0:173:6184:0:0:0,-52.0782,-556.659	0/1:102:59,43:59:2102:43:1540:-108.188,0,-158.743	0/1:144:75,69:75:2679:69:2448:-177.226,0,-197.999	0/1:179:73,106:73:2602:106:3782:-286.694,0,-180.543	0/0:299:297,2:297:10560:2:72:0,-83.1712,-943.48	0/0:233:232,1:232:8261:1:36:0,-66.5417,-739.906
chr07	6494781	.	GTAGAAGAAAT	GTAGAAAT,TTAAAAGAAAT	261502	PASS	AB=0.503077,0.487557;ABP=3.62508,13.0617;AC=134,54;AF=0.712766,0.287234;AN=188;AO=8250,3661;CIGAR=2M3D6M,1X2M1X7M;DP=12028;DPB=9756.27;DPRA=14.3596,1.47876;EPP=17068.1,5133.33;EPPR=0;GTI=2;LEN=3,11;MEANALT=2.68817,3.2069;MQM=59.9932,59.9629;MQMR=0;NS=94;NUMALT=2;ODDS=0.860247;PAIRED=0,0;PAIREDR=0;PAO=0.333333,0.333333;PQA=10.6667,10.6667;PQR=10.6667;PRO=0.333333;QA=290008,129474;QR=0;RO=0;RPL=8150,3301;RPP=17059.6,5133.33;RPPR=0;RPR=100,360;RUN=1,1;SAF=1,0;SAP=17909,7952.77;SAR=8249,3661;SRF=0;SRP=0;SRR=0;TYPE=del,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:27:0,6,21:0:0:6,21:198,743:-76.8742,-60.8723,-59.0661,-16.3371,0,-10.0155	1/2:281:0,145,135:0:0:145,135:5083,4804:-805.25,-391.629,-347.98,-413.724,0,-373.084	1/2:202:0,124,77:0:0:124,77:4345,2708:-574.055,-220.504,-183.176,-353.621,0,-330.441	1/2:836:0,396,433:0:0:396,433:13923,15322:-2381.34,-1248.03,-1128.82,-1133.36,0,-1003.01	1/1:15:0,15,0:0:0:15,0:515,0:-46.675,-4.51545,0,-46.675,-4.51545,-46.675	1/1:40:0,40,0:0:0:40,0:1412,0:-127.377,-12.0412,0,-127.377,-12.0412,-127.377	1/1:236:0,231,0:0:0:231,0:8094,0:-728.208,-69.5379,0,-728.208,-69.5379,-728.208	1/2:241:0,119,122:0:0:119,122:4148,4321:-689.683,-352.344,-316.522,-337.69,0,-300.964	1/1:69:0,68,0:0:0:68,0:2399,0:-215.808,-20.47,0,-215.808,-20.47,-215.808	1/2:201:0,108,91:0:0:108,91:3817,3215:-572.818,-261.954,-229.443,-310.989,0,-283.595	1/1:60:0,59,0:0:0:59,0:2060,0:-185.396,-17.7608,0,-185.396,-17.7608,-185.396	1/1:83:0,81,0:0:0:81,0:2857,0:-257.053,-24.3834,0,-257.053,-24.3834,-257.053	1/1:79:0,77,0:0:0:77,0:2724,0:-245.035,-23.1793,0,-245.035,-23.1793,-245.035	1/2:53:0,27,26:0:0:27,26:936,922:-151.543,-75.4708,-67.343,-76.4225,0,-68.5957	1/2:86:0,34,52:0:0:34,52:1199,1852:-248.932,-151.306,-141.071,-97.9798,0,-82.3262	1/2:77:0,34,42:0:0:34,42:1183,1490:-217.692,-121.507,-111.272,-96.2921,0,-83.6488	1/1:57:0,57,0:0:0:57,0:2024,0:-182.433,-17.1587,0,-182.433,-17.1587,-182.433	1/2:64:0,43,21:0:0:43,21:1507,753:-184.395,-61.7751,-48.8308,-122.975,0,-116.654	1/2:49:0,25,24:0:0:25,24:896,851:-142.763,-69.6842,-62.1585,-73.4346,0,-66.2099	1/2:318:0,166,151:0:0:166,151:5878,5320:-911.977,-433.164,-383.193,-478.846,0,-433.391	1/1:187:0,186,0:0:0:186,0:6520,0:-586.686,-55.9916,0,-586.686,-55.9916,-586.686	1/2:104:0,33,69:0:0:33,69:1155,2439:-292.708,-198.736,-188.802,-94.0612,0,-73.2901	1/1:166:0,162,0:0:0:162,0:5674,0:-510.49,-48.7669,0,-510.49,-48.7669,-510.49	1/2:285:0,145,139:0:0:145,139:5085,4947:-817.029,-403.23,-359.58,-413.842,0,-371.999	1/2:60:0,17,43:0:0:17,43:600,1497:-170.936,-122.075,-116.958,-49.2117,0,-36.2674	1/2:525:0,261,258:0:0:261,258:9196,9070:-1487.01,-738.299,-659.73,-748.736,0,-671.07	1/1:226:0,220,1:0:0:220,1:7750,36:-697.232,-66.2266,0,-694.294,-63.2798,-693.993	1/1:43:0,43,0:0:0:43,0:1504,0:-135.65,-12.9443,0,-135.65,-12.9443,-135.65	1/2:377:0,163,211:0:0:163,211:5729,7479:-1075.67,-609.361,-560.293,-466.381,0,-402.863	1/1:119:0,112,3:0:0:112,3:3933,108:-353.809,-33.7154,0,-344.996,-24.901,-344.093	1/1:165:0,165,0:0:0:165,0:5769,0:-519.338,-49.67,0,-519.338,-49.67,-519.338	1/2:13:0,6,7:0:0:6,7:212,252:-38.1841,-20.9217,-19.1156,-17.6186,0,-15.5114	1/1:35:0,35,0:0:0:35,0:1243,0:-112.174,-10.5361,0,-112.174,-10.5361,-112.174	1/1:5:0,5,0:0:0:5,0:176,0:-16.185,-1.50515,0,-16.185,-1.50515,-16.185	1/1:13:0,13,0:0:0:13,0:468,0:-42.4596,-3.91339,0,-42.4596,-3.91339,-42.4596	1/2:25:0,6,19:0:0:6,19:212,668:-71.9879,-54.7221,-52.9159,-17.6186,0,-11.899	1/2:206:0,117,88:0:0:117,88:4094,3118:-587.22,-254.146,-218.926,-333.214,0,-306.724	1/2:242:0,144,97:0:0:144,97:5047,3455:-692.397,-281.713,-238.365,-410.786,0,-381.586	1/2:78:0,39,38:0:0:39,38:1355,1331:-218.535,-108.377,-96.6368,-110.234,0,-98.7949	1/2:9:0,5,4:0:0:5,4:180,144:-26.7966,-12.1095,-10.6043,-15.0469,0,-13.8428	1/2:136:0,74,61:0:0:74,61:2593,2167:-387.543,-176.552,-154.275,-211.092,0,-192.73	1/2:51:0,28,22:0:0:28,22:1004,785:-145.94,-64.0491,-55.6202,-81.9452,0,-75.3226	1/2:157:0,89,66:0:0:89,66:3119,2318:-442.528,-188.731,-161.939,-253.866,0,-233.998	1/2:82:0,39,39:0:0:39,39:1375,1373:-223.724,-111.769,-100.029,-111.949,0,-100.208	1/2:80:0,36,44:0:0:36,44:1240,1544:-226.719,-126.004,-115.167,-101.061,0,-87.8161	1/1:89:0,88,0:0:0:88,0:3115,0:-280.326,-26.4906,0,-280.326,-26.4906,-280.326	1/1:113:0,113,0:0:0:113,0:3955,0:-356.143,-34.0164,0,-356.143,-34.0164,-356.143	1/2:169:0,107,62:0:0:107,62:3752,2196:-484.557,-179.237,-147.026,-305.673,0,-287.009	1/1:177:0,177,0:0:0:177,0:6235,0:-561.255,-53.2823,0,-561.255,-53.2823,-561.255	1/2:198:0,100,96:0:0:100,96:3527,3421:-566.126,-278.939,-248.836,-287.274,0,-258.375	1/2:257:0,120,134:0:0:120,134:4184,4738:-726.233,-385.955,-349.831,-340.34,0,-300.002	1/1:10:0,10,0:0:0:10,0:356,0:-32.3812,-3.0103,0,-32.3812,-3.0103,-32.3812	1/2:185:0,111,72:0:0:111,72:3899,2550:-525.097,-207.756,-174.342,-317.373,0,-295.699	1/1:69:0,69,0:0:0:69,0:2414,0:-217.517,-20.7711,0,-217.517,-20.7711,-217.517	1/2:8:0,3,5:0:0:3,5:104,180:-23.4951,-15.0469,-14.1438,-8.79971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chr07	6546618	.	A	G	158350	PASS	AB=0.613341;ABP=389.414;AC=142;AF=0.755319;AN=188;AO=7349;CIGAR=1X;DP=8709;DPB=8709;DPRA=0;EPP=15961.2;EPPR=2906.27;GTI=5;LEN=1;MEANALT=1.18085;MQM=59.9858;MQMR=59.9656;NS=94;NUMALT=1;ODDS=3.57163;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=262930;QR=47981;RO=1337;RPL=0;RPP=15961.2;RPPR=2906.27;RPR=7349;RUN=1;SAF=7349;SAP=15961.2;SAR=0;SRF=1337;SRP=2906.27;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:29:8,18:8:288:18:644:-50.1857,0,-18.1499	0/1:40:7,32:7:252:32:1152:-91.9822,0,-11.0121	0/1:131:41,90:41:1464:90:3215:-250.134,0,-92.6211	0/1:158:62,96:62:2228:96:3440:-262.25,0,-153.221	1/1:59:0,59:0:0:59:2116:-190.709,-17.7608,0	1/1:44:0,44:0:0:44:1576:-142.132,-13.2453,0	1/1:89:0,89:0:0:89:3176:-286.065,-26.7917,0	0/1:109:34,74:34:1224:74:2629:-204.079,0,-77.6882	1/1:51:0,51:0:0:51:1832:-165.161,-15.3525,0	0/1:73:32,41:32:1148:41:1464:-110.081,0,-81.6546	1/1:54:0,54:0:0:54:1940:-174.876,-16.2556,0	1/1:47:0,47:0:0:47:1684:-151.847,-14.1484,0	1/1:46:0,46:0:0:46:1644:-148.249,-13.8474,0	0/1:62:29,33:29:1044:33:1184:-88.2045,0,-75.6109	0/1:47:29,18:29:1044:18:648:-44.5035,0,-80.1264	0/1:53:22,31:22:792:31:1103:-83.5946,0,-55.6511	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	0/1:16:8,8:8:288:8:288:-21.4509,0,-21.4509	0/1:128:40,88:40:1421:88:3164:-246.452,0,-89.6536	1/1:104:0,104:0:0:104:3740:-336.799,-31.3071,0	0/1:73:27,46:27:957:46:1656:-127.353,0,-64.4668	1/1:97:0,97:0:0:97:3484:-313.77,-29.1999,0	0/1:27:6,21:6:212:21:748:-59.5175,0,-11.297	0/1:21:3,18:3:108:18:644:-51.969,0,-3.75354	0/1:185:73,112:73:2616:112:4009:-305.307,0,-179.997	1/1:130:0,130:0:0:130:4640:-417.762,-39.1339,0	1/1:18:0,17:0:0:17:612:-55.127,-5.11751,0	0/1:164:73,90:73:2624:90:3224:-240.954,0,-186.979	1/1:169:2,167:2:72:167:5949:-528.682,-44.0373,0	1/1:59:0,58:0:0:58:2084:-187.482,-17.4597,0	1/1:153:0,153:0:0:153:5481:-493.415,-46.0576,0	1/1:321:1,319:1:36:319:11377:-1020.25,-93.0523,0	1/1:252:0,251:0:0:251:8989:-808.619,-75.5585,0	1/1:151:0,151:0:0:151:5396:-485.77,-45.4555,0	1/1:105:1,104:1:36:104:3732:-332.48,-28.0099,0	0/1:104:53,51:53:1893:51:1832:-133.854,0,-139.339	0/1:100:36,64:36:1296:64:2265:-174.008,0,-86.8409	0/1:35:16,19:16:576:19:680:-50.9931,0,-41.6389	1/1:205:1,203:1:36:203:7253:-649.216,-58.1717,0	0/1:97:30,67:30:1080:67:2408:-187.776,0,-68.3133	0/1:17:5,12:5:180:12:432:-34.1037,0,-11.4346	0/1:123:23,99:23:805:99:3545:-282.167,0,-35.6824	0/1:37:18,19:18:648:19:675:-49.9388,0,-47.5138	0/1:40:23,17:23:828:17:608:-43.0062,0,-62.8029	1/1:66:0,66:0:0:66:2356:-212.299,-19.868,0	1/1:131:0,130:0:0:130:4657:-418.929,-39.1339,0	0/1:105:34,69:34:1224:69:2472:-191.398,0,-79.1305	1/1:71:0,71:0:0:71:2525:-227.5,-21.3731,0	0/1:83:44,39:44:1584:39:1404:-101.674,0,-117.866	0/1:75:32,43:32:1148:43:1548:-117.036,0,-81.0526	1/1:403:0,403:0:0:403:14437:-1299.08,-121.315,0	0/1:114:41,73:41:1472:73:2597:-199.66,0,-98.4505	1/1:111:0,110:0:0:110:3933:-353.801,-33.1133,0	1/1:47:0,47:0:0:47:1684:-151.847,-14.1484,0	0/1:120:44,76:44:1584:76:2728:-209.639,0,-106.728	0/1:19:8,11:8:284:11:381:-28.9011,0,-20.1838	1/1:194:0,194:0:0:194:6941:-624.754,-58.3998,0	1/1:117:0,117:0:0:117:4185:-376.83,-35.2205,0	1/1:99:0,99:0:0:99:3545:-319.257,-29.802,0	1/1:43:0,43:0:0:43:1535:-138.443,-12.9443,0	1/1:194:4,190:4:144:190:6790:-597.856,-45.0862,0	1/1:207:1,206:1:36:206:7355:-658.397,-58.7149,0	1/1:137:1,136:1:36:136:4886:-436.292,-37.6428,0	0/1:45:18,27:18:648:27:968:-73.891,0,-45.1055	1/1:95:0,95:0:0:95:3347:-301.446,-28.5979,0	0/1:147:55,90:55:1976:90:3213:-245.497,0,-134.218	0/1:109:50,59:50:1785:59:2120:-158.256,0,-128.118	0/1:29:9,20:9:324:20:720:-56.3989,0,-20.776	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:25:9,13:9:324:13:464:-35.1205,0,-22.5279	0/1:32:5,27:5:180:27:972:-78.1649,0,-6.9191	1/1:93:0,93:0:0:93:3325:-299.466,-27.9958,0	0/1:68:34,34:34:1220:34:1197:-87.5634,0,-89.6368	1/1:163:0,163:0:0:163:5788:-521.019,-49.0679,0	1/1:113:0,113:0:0:113:4052:-364.867,-34.0164,0	0/1:96:17,79:17:612:79:2844:-227.298,0,-26.5146	1/1:104:1,103:1:36:103:3684:-328.165,-27.7088,0	1/1:124:0,124:0:0:124:4426:-398.511,-37.3277,0	1/1:78:0,78:0:0:78:2788:-251.161,-23.4803,0	0/1:118:47,71:47:1692:71:2540:-193.33,0,-116.855	0/1:86:34,52:34:1224:52:1864:-142.151,0,-84.5785	0/1:47:29,18:29:1044:18:648:-44.5035,0,-80.1264	0/1:59:32,27:32:1152:27:972:-70.0371,0,-86.2294	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	0/1:79:33,46:33:1184:46:1647:-124.736,0,-83.0869	1/1:21:0,20:0:0:20:720:-64.7692,-6.0206,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	1/1:59:0,59:0:0:59:2114:-190.529,-17.7608,0	0/1:26:8,18:8:288:18:648:-50.8251,0,-18.4406	0/1:71:23,48:23:828:48:1724:-134.072,0,-53.471	0/1:41:21,20:21:756:20:720:-52.7865,0,-56.025	1/1:194:0,193:0:0:193:6924:-622.847,-58.0988,0	1/1:58:0,58:0:0:58:2076:-187.111,-17.4597,0
chr07	6546623	.	A	T	18445.1	PASS	AB=0.378028;ABP=451.153;AC=46;AF=0.244681;AN=188;AO=1318;CIGAR=1X;DP=8769;DPB=8769;DPRA=0.721708;EPP=2865.01;EPPR=16176.1;GTI=5;LEN=1;MEANALT=1.01923;MQM=59.9712;MQMR=59.9287;NS=94;NUMALT=1;ODDS=2.78964;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46976;QR=267124;RO=7448;RPL=0;RPP=2865.01;RPPR=16176.1;RPR=1318;RUN=1;SAF=1318;SAP=2865.01;SAR=0;SRF=7448;SRP=16176.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:29:21,8:21:756:8:276:-16.4448,0,-57.0597	0/1:41:33,8:33:1184:8:284:-13.5611,0,-93.6685	0/1:132:91,41:91:3264:41:1445:-90.6079,0,-254.236	0/1:158:96,62:96:3452:62:2212:-151.782,0,-263.329	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:91:91,0:91:3276:0:0:0,-27.3937,-295.059	0/1:108:76,32:76:2736:32:1128:-69.317,0,-213.115	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/1:73:41,32:41:1464:32:1144:-81.2943,0,-110.081	0/0:56:56,0:56:2016:0:0:0,-16.8577,-181.713	0/0:50:50,0:50:1777:0:0:0,-15.0515,-160.211	0/0:46:45,1:45:1620:1:21:0,-11.7474,-143.99	0/1:60:33,27:33:1184:27:968:-69.3756,0,-88.8065	0/1:47:19,28:19:680:28:1000:-76.167,0,-47.3808	0/1:53:31,22:31:1116:22:792:-55.6511,0,-84.4262	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:16:8,8:8:288:8:284:-21.0869,0,-21.4509	0/1:131:91,40:91:3272:40:1432:-89.7427,0,-255.264	0/0:106:105,1:105:3768:1:36:0,-28.3109,-335.72	0/1:75:48,27:48:1720:27:968:-64.8039,0,-132.508	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.247	0/1:27:21,6:21:756:6:216:-11.6627,0,-60.2394	0/1:21:18,3:18:644:3:108:-3.75354,0,-51.969	0/1:187:115,72:115:4105:72:2564:-174.718,0,-313.342	0/0:133:133,0:133:4753:0:0:0,-40.037,-427.927	0/0:18:18,0:18:648:0:0:0,-5.41854,-57.9481	0/1:167:94,73:94:3376:73:2576:-181.817,0,-253.783	0/0:171:169,2:169:6018:2:72:0,-44.6394,-534.885	0/0:61:61,0:61:2181:0:0:0,-18.3628,-196.448	0/0:151:151,0:151:5428:0:0:0,-45.4555,-488.647	0/0:326:326,0:326:11697:0:0:0,-98.1358,-1051.89	0/0:254:254,0:254:9102:0:0:0,-76.4616,-819.149	0/0:151:151,0:151:5420:0:0:0,-45.4555,-487.928	0/0:107:106,1:106:3804:1:36:0,-28.6119,-338.957	0/1:104:51,53:51:1836:53:1904:-140.331,0,-134.214	0/1:96:63,33:63:2260:33:1184:-77.9694,0,-174.764	0/1:35:18,17:18:648:17:611:-44.7871,0,-48.1158	0/0:204:204,0:204:7309:0:0:0,-61.4101,-657.849	0/1:96:66,30:66:2368:30:1072:-67.8936,0,-184.479	0/1:17:12,5:12:432:5:180:-11.4346,0,-34.1037	0/1:122:100,22:100:3581:22:780:-33.7974,0,-285.769	0/1:38:19,19:19:684:19:684:-50.4512,0,-50.4512	0/1:40:17,23:17:612:23:828:-62.8029,0,-43.3676	0/0:69:69,0:69:2480:0:0:0,-20.7711,-222.935	0/0:131:131,0:131:4681:0:0:0,-39.4349,-421.445	0/1:106:71,35:71:2552:35:1252:-81.0759,0,-197.46	0/0:72:72,0:72:2580:0:0:0,-21.6742,-232.449	0/1:83:39,44:39:1404:44:1565:-116.155,0,-101.674	0/1:72:42,30:42:1504:30:1068:-74.7579,0,-113.98	0/0:405:405,0:405:14564:0:0:0,-121.917,-1310.49	0/1:113:73,40:73:2616:40:1428:-94.8011,0,-201.671	0/0:110:110,0:110:3925:0:0:0,-33.1133,-353.442	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/1:124:81,43:81:2916:43:1523:-100.035,0,-225.346	0/1:18:11,7:11:392:7:252:-17.6104,0,-30.2015	0/0:193:193,0:193:6917:0:0:0,-58.0988,-622.593	0/0:119:119,0:119:4257:0:0:0,-35.8226,-383.307	0/0:100:100,0:100:3600:0:0:0,-30.103,-324.205	0/0:43:43,0:43:1532:0:0:0,-12.9443,-138.173	0/0:195:195,0:195:7012:0:0:0,-58.7008,-631.139	0/0:213:213,0:213:7611:0:0:0,-64.1194,-685.024	0/0:136:135,1:135:4848:1:36:0,-37.3418,-432.874	0/1:45:27,18:27:972:18:644:-44.7442,0,-74.2516	0/0:96:96,0:96:3440:0:0:0,-28.8989,-309.813	0/1:147:93,54:93:3344:54:1928:-129.545,0,-254.83	0/1:108:59,49:59:2101:49:1744:-124.733,0,-156.846	0/1:29:20,9:20:720:9:324:-20.776,0,-56.3989	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/1:24:16,8:16:576:8:288:-19.0427,0,-44.785	0/1:32:27,5:27:972:5:180:-6.91911,0,-78.1649	0/0:97:97,0:97:3476:0:0:0,-29.1999,-313.051	0/1:68:34,34:34:1224:34:1208:-88.556,0,-89.997	0/0:164:164,0:164:5865:0:0:0,-49.3689,-527.903	0/0:115:115,0:115:4121:0:0:0,-34.6184,-371.072	0/1:97:80,17:80:2857:17:598:-24.9476,0,-228.166	0/0:104:103,1:103:3696:1:36:0,-27.7088,-329.243	0/0:127:127,0:127:4572:0:0:0,-38.2308,-411.643	0/0:80:78,0:78:2792:0:0:0,-23.4803,-251.161	0/1:121:73,48:73:2612:48:1696:-116.493,0,-198.903	0/1:87:53,34:53:1900:34:1204:-82.4762,0,-145.088	0/1:46:17,29:17:612:29:1036:-79.7065,0,-41.5661	0/1:59:27,32:27:972:32:1152:-86.2294,0,-70.0371	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:79:45,33:45:1620:33:1180:-82.6679,0,-122.25	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3649	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.428	0/1:26:18,8:18:648:8:288:-18.4406,0,-50.8251	0/1:71:48,23:48:1728:23:825:-53.2005,0,-134.432	0/1:40:20,20:20:720:20:716:-52.7265,0,-53.0876	0/0:198:198,0:198:7089:0:0:0,-59.6039,-638.05	0/0:60:60,0:60:2141:0:0:0,-18.0618,-192.956
chr07	7455409	.	G	A	137569	PASS	AB=0.512143;ABP=18.5674;AC=53;AF=0.281915;AN=188;AO=6245;CIGAR=1X;DP=18864;DPB=18864;DPRA=1.50972;EPP=2885.08;EPPR=5204.56;GTI=1;LEN=1;MEANALT=1.06349;MQM=55.7204;MQMR=59.9633;NS=94;NUMALT=1;ODDS=2.5822;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=222823;QR=449541;RO=12610;RPL=34;RPP=13270.1;RPPR=26763.5;RPR=6211;RUN=1;SAF=4596;SAP=3022.84;SAR=1649;SRF=9125;SRP=5480.7;SRR=3485;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:48:23,25:23:824:25:900:-66.7735,0,-60.0339	0/1:67:36,31:36:1292:31:1112:-79.9173,0,-96.4148	0/1:139:72,67:72:2575:67:2389:-173.07,0,-190.155	0/1:318:154,164:154:5467:164:5850:-430.444,0,-396.433	0/0:94:94,0:94:3348:0:0:0,-28.2968,-301.538	0/0:41:41,0:41:1442:0:0:0,-12.3422,-130.072	0/0:179:178,1:178:6217:1:36:0,-50.2861,-555.947	0/1:87:49,38:49:1756:38:1356:-95.5674,0,-132.134	0/0:68:68,0:68:2417:0:0:0,-20.47,-217.785	0/1:145:64,81:64:2273:81:2912:-218.463,0,-161.177	0/0:339:338,0:338:12103:0:0:0,-101.748,-1088.67	0/0:116:116,0:116:4138:0:0:0,-34.9195,-372.601	0/0:94:94,0:94:3368:0:0:0,-28.2968,-303.336	0/1:106:54,52:54:1936:52:1837:-133.252,0,-142.607	0/1:128:65,63:65:2287:63:2252:-163.299,0,-167.558	0/1:151:87,64:87:3104:64:2282:-159.335,0,-234.133	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.416	0/1:188:114,74:114:4066:74:2645:-181.097,0,-309.373	0/1:159:80,79:80:2822:79:2840:-207.546,0,-206.354	0/0:224:220,2:220:7833:2:72:0,-60.3565,-698.171	0/1:88:23,65:23:824:65:2309:-181.263,0,-47.9927	0/0:224:221,3:221:7859:3:108:0,-57.3604,-697.269	0/1:137:77,60:77:2760:60:2156:-152.909,0,-207.4	0/1:156:74,82:74:2648:82:2906:-214.319,0,-191.577	0/1:273:136,137:136:4847:137:4888:-357.683,0,-354.204	0/0:192:192,0:192:6837:0:0:0,-57.7978,-615.395	0/0:63:63,0:63:2240:0:0:0,-18.9649,-201.864	0/1:318:156,162:156:5542:162:5788:-425.055,0,-403.181	0/0:161:152,9:152:5428:9:320:0,-19.3478,-459.529	0/0:163:161,2:161:5707:2:72:0,-42.2361,-506.916	0/1:608:286,322:286:10261:322:11472:-846.239,0,-740.385	0/0:422:420,0:420:15033:0:0:0,-126.433,-1352.33	0/0:442:441,1:441:15786:1:36:0,-129.461,-1416.83	0/1:770:371,399:371:13244:399:14231:-1044.8,0,-959.86	0/1:519:220,298:220:7870:298:10604:-795,0,-552.027	0/1:329:174,155:174:6191:155:5527:-398.207,0,-458.25	0/1:101:45,56:45:1588:56:2000:-149.348,0,-112.806	0/1:265:130,135:130:4641:135:4828:-353.46,0,-338.079	0/1:264:128,136:128:4574:136:4849:-356.123,0,-332.346	0/1:232:115,117:115:4096:117:4184:-305.287,0,-298.984	0/1:268:135,133:135:4835:133:4742:-344.693,0,-354.623	0/1:259:110,149:110:3900:149:5324:-400.894,0,-273.228	0/1:103:55,47:55:1944:47:1676:-119.92,0,-144.208	0/1:126:60,66:60:2102:66:2372:-175.471,0,-151.514	0/0:137:137,0:137:4789:0:0:0,-41.2411,-431.17	0/0:83:83,0:83:2973:0:0:0,-24.9855,-267.801	0/1:237:100,137:100:3506:137:4859:-365.856,0,-244.406	0/0:95:95,0:95:3376:0:0:0,-28.5978,-304.053	0/1:151:87,64:87:3088:64:2292:-160.92,0,-232.692	0/1:143:63,80:63:2232:80:2871:-215.494,0,-158.095	0/0:310:310,0:310:11074:0:0:0,-93.3193,-996.546	0/1:80:34,46:34:1224:46:1622:-121.924,0,-86.3846	0/0:90:90,0:90:3167:0:0:0,-27.0927,-285.2	0/1:350:185,165:185:6621:165:5841:-418.879,0,-490.607	0/1:218:102,116:102:3625:116:4148:-307.218,0,-260.055	0/1:90:46,44:46:1626:44:1572:-114.617,0,-119.533	0/1:361:170,191:170:6070:191:6798:-502.815,0,-437.729	0/0:168:168,0:168:6001:0:0:0,-50.573,-540.125	0/0:144:144,0:144:5148:0:0:0,-43.3483,-463.458	0/0:131:131,0:131:4665:0:0:0,-39.4349,-420.012	0/1:339:162,177:162:5808:177:6337:-467.111,0,-420.781	0/0:110:110,0:110:3873:0:0:0,-33.1133,-348.766	0/0:228:225,3:225:7953:3:108:0,-58.5597,-705.137	0/1:81:35,46:35:1237:46:1648:-123.902,0,-87.2489	0/0:115:115,0:115:4058:0:0:0,-34.6184,-365.409	0/1:254:135,119:135:4757:119:4252:-306.069,0,-351.737	0/1:153:38,115:38:1328:115:4086:-320.562,0,-73.7593	0/1:435:232,203:232:8327:203:7261:-519.999,0,-618.476	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/1:83:39,44:39:1387:44:1559:-115.584,0,-100.143	0/1:297:141,156:141:5068:156:5566:-410.091,0,-366.856	0/0:38:37,1:37:1328:1:36:0,-7.98465,-116.368	0/1:93:42,51:42:1512:51:1836:-137.148,0,-108.379	0/0:313:312,0:312:11126:0:0:0,-93.9214,-1000.86	0/0:187:187,0:187:6652:0:0:0,-56.2926,-598.761	0/1:66:38,28:38:1364:28:974:-67.6033,0,-103.193	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/0:739:739,0:739:26533:0:0:0,-222.461,-2387.19	0/0:178:177,1:177:6308:1:36:0,-49.9851,-564.218	0/1:113:55,58:55:1968:58:2049:-150.462,0,-143.379	0/1:406:195,211:195:6948:211:7526:-554.431,0,-503.169	0/1:111:66,45:66:2320:45:1616:-112.259,0,-175.644	0/1:170:88,82:88:3136:82:2927:-211.809,0,-231.29	0/0:121:121,0:121:4323:0:0:0,-36.4246,-389.232	0/1:241:127,114:127:4539:114:4071:-293.614,0,-336.126	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:77:77,0:77:2760:0:0:0,-23.1793,-248.642	0/0:89:89,0:89:3196:0:0:0,-26.7917,-287.863	0/1:457:250,207:250:8954:207:7400:-525.543,0,-668.266	0/1:731:361,370:361:12872:370:13246:-968.143,0,-938.244	0/1:135:40,95:40:1436:95:3375:-263.121,0,-88.8986	0/0:75:75,0:75:2648:0:0:0,-22.5772,-238.564	0/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chr07	7455418	.	GG	CG,CA	545776	PASS	AB=0.483108,0.514451;ABP=35.5085,26.7968;AC=135,53;AF=0.718085,0.281915;AN=188;AO=13931,6777;CIGAR=1X1M,2X;DP=20756;DPB=20759.5;DPRA=0,1.36802;EPP=30184.3,14710.4;EPPR=9.52472;GTI=0;LEN=1,2;MEANALT=2.10638,2.51562;MQM=59.9648,55.9568;MQMR=60;NS=94;NUMALT=2;ODDS=11.289;PAIRED=0,0;PAIREDR=0;PAO=3,4;PQA=104,140;PQR=0;PRO=0;QA=494537,238702;QR=75;RO=3;RPL=9086,4658;RPP=2806.56,2068.59;RPPR=3.73412;RPR=4845,2119;RUN=1,1;SAF=9094,4659;SAP=2827.76,2071.85;SAR=4837,2118;SRF=1;SRP=3.73412;SRR=2;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:131:0,67,64:0:0:67,64:2347,2229:-372.487,-181.517,-161.348,-191.319,0,-172.053	1/2:115:0,61,54:0:0:61,54:2171,1852:-327.41,-150.465,-132.102,-177.293,0,-161.038	1/2:257:0,130,126:0:0:130,126:4606,4398:-732.388,-357.168,-318.035,-375.211,0,-337.282	1/2:322:0,157,165:0:0:157,165:5582,5776:-924.325,-469.44,-422.179,-454.877,0,-405.207	1/1:95:0,95,0:0:0:95,0:3336,0:-300.458,-28.5979,0,-300.458,-28.5979,-300.458	1/1:74:0,74,0:0:0:74,0:2629,0:-236.848,-22.2762,0,-236.848,-22.2762,-236.848	1/1:180:0,178,1:0:0:178,1:6290,34:-565.849,-53.5833,0,-563.091,-50.8353,-562.79	1/2:219:0,113,106:0:0:113,106:4000,3654:-622.694,-296.869,-262.853,-326.174,0,-294.265	1/1:187:0,186,0:0:0:186,0:6566,0:-590.71,-55.9916,0,-590.71,-55.9916,-590.71	1/2:149:0,65,84:0:0:65,84:2249,2949:-422.902,-240.148,-220.581,-183.102,0,-157.815	1/1:342:0,342,0:0:0:342,0:12146,0:-1092.99,-102.952,0,-1092.99,-102.952,-1092.99	1/1:201:0,201,0:0:0:201,0:7078,0:-637.084,-60.507,0,-637.084,-60.507,-637.084	1/1:181:0,180,0:0:0:180,0:6398,0:-575.551,-54.1854,0,-575.551,-54.1854,-575.551	1/2:106:0,54,52:0:0:54,52:1935,1782:-302.48,-144.659,-128.404,-158.17,0,-142.517	1/2:129:0,67,62:0:0:67,62:2368,2133:-366.102,-173.257,-153.088,-193.194,0,-174.53	1/2:155:0,88,67:0:0:88,67:3118,2357:-445.319,-191.317,-164.826,-254.354,0,-234.185	1/1:77:0,77,0:0:0:77,0:2720,0:-245.041,-23.1793,0,-245.041,-23.1793,-245.041	1/1:93:0,92,0:0:0:92,0:3237,0:-291.193,-27.6948,0,-291.193,-27.6948,-291.193	1/2:219:0,132,87:0:0:132,87:4729,3088:-637.042,-251.368,-211.632,-386.031,0,-359.841	1/2:164:0,84,80:0:0:84,80:2964,2839:-472.592,-231.242,-205.956,-241.703,0,-217.621	1/1:224:0,220,2:0:0:220,2:7845,72:-705.718,-66.2266,0,-699.848,-60.3565,-699.246	1/2:91:0,23,68:0:0:23,68:824,2386:-261.336,-194.132,-187.208,-67.5596,0,-47.0896	1/1:226:0,223,3:0:0:223,3:7912,108:-711.75,-67.1297,0,-702.943,-57.9625,-702.039	1/2:142:0,81,61:0:0:81,61:2877,2164:-410.943,-176.514,-152.13,-234.784,0,-216.421	1/2:156:0,73,83:0:0:73,83:2562,2932:-446.924,-238.422,-216.447,-208.853,0,-183.868	1/2:275:0,137,138:0:0:137,138:4899,4885:-797.502,-398.038,-356.797,-399.82,0,-358.278	1/1:194:0,193,0:0:0:193,0:6785,0:-610.368,-58.0988,0,-610.368,-58.0988,-610.368	1/1:64:0,64,0:0:0:64,0:2251,0:-202.851,-19.2659,0,-202.851,-19.2659,-202.851	1/2:323:0,157,165:0:0:157,165:5542,5767:-920.168,-468.873,-421.611,-451.246,0,-401.576	1/1:164:0,155,9:0:0:155,9:5487,307:-493.616,-46.6597,0,-468.73,-21.432,-466.02	1/1:163:0,161,2:0:0:161,2:5684,72:-511.316,-48.4658,0,-505.445,-42.2361,-504.843	1/2:613:0,285,326:0:0:285,326:10189,11584:-1771.84,-941.05,-855.257,-830.783,0,-732.648	1/1:422:0,422,0:0:0:422,0:15070,0:-1356.02,-127.035,0,-1356.02,-127.035,-1356.02	1/1:459:0,454,5:0:0:454,5:16209,163:-1458.17,-136.668,0,-1445.3,-123.477,-1443.79	1/2:780:0,377,402:0:0:377,402:13420,14235:-2249.95,-1156.37,-1042.88,-1093.57,0,-972.56	1/2:529:0,220,305:0:0:220,305:7870,10818:-1520.24,-878.493,-812.267,-641.74,0,-549.926	1/2:329:0,174,155:0:0:174,155:6159,5388:-939.753,-438.068,-385.689,-502.035,0,-455.375	1/2:105:1,45,59:1:25:45,59:1612,2080:-298.201,-167.034,-155.435,-129.625,0,-113.811	1/2:331:0,162,169:0:0:162,169:5741,6015:-956.55,-488.864,-440.097,-468.041,0,-417.167	1/2:268:0,129,139:0:0:129,139:4612,4940:-777.918,-401.867,-363.034,-376.347,0,-334.504	1/2:241:0,119,122:0:0:119,122:4220,4247:-687.952,-344.15,-308.328,-344.152,0,-307.427	1/2:272:0,135,137:0:0:135,137:4830,4873:-789.156,-395.298,-354.659,-394.214,0,-352.973	1/2:268:0,115,152:0:0:115,152:4077,5329:-765.365,-433.219,-398.601,-332.14,0,-286.383	1/2:103:0,55,48:0:0:55,48:1949,1699:-297.386,-138.613,-122.056,-159.127,0,-144.678	1/2:128:0,61,67:0:0:61,67:2101,2399:-366.297,-195.658,-177.295,-170.989,0,-150.82	1/1:135:0,135,0:0:0:135,0:4786,0:-430.897,-40.6391,0,-430.897,-40.6391,-430.897	1/1:156:0,156,0:0:0:156,0:5545,0:-499.175,-46.9607,0,-499.175,-46.9607,-499.175	1/2:232:0,93,139:0:0:93,139:3280,4828:-659.719,-392.648,-364.652,-267.421,0,-225.578	1/1:94:0,93,0:0:0:93,0:3286,0:-295.6,-27.9958,0,-295.6,-27.9958,-295.6	1/2:154:0,88,65:0:0:88,65:3113,2277:-438.664,-185.108,-158.618,-253.547,0,-233.98	1/2:143:0,62,80:0:0:62,80:2184,2800:-405.529,-227.72,-209.056,-177.801,0,-153.718	1/1:307:0,306,0:0:0:306,0:10934,0:-983.594,-92.1152,0,-983.594,-92.1152,-983.594	1/2:173:0,78,94:0:0:78,94:2783,3297:-494.886,-268.009,-244.529,-226.87,0,-198.574	1/1:94:0,94,0:0:0:94,0:3312,0:-298.296,-28.2968,0,-298.296,-28.2968,-298.296	1/2:357:0,188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chr07	7716460	.	T	C	220972	PASS	AB=0.456625;ABP=178.765;AC=135;AF=0.718085;AN=188;AO=11306;CIGAR=1X;DP=17186;DPB=17186;DPRA=0;EPP=24536.3;EPPR=12749.6;GTI=2;LEN=1;MEANALT=1.09574;MQM=59.9847;MQMR=59.9913;NS=94;NUMALT=1;ODDS=3.24446;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=396835;QR=209874;RO=5870;RPL=2;RPP=24536.3;RPPR=12749.6;RPR=11304;RUN=1;SAF=0;SAP=24553.7;SAR=11306;SRF=0;SRP=12749.6;SRR=5870;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:11:6,5:6:212:5:180:-13.2407,0,-16.1135	0/1:129:62,67:62:2220:67:2391:-176.614,0,-161.232	0/1:97:56,41:56:2016:41:1439:-100.605,0,-152.513	0/1:188:101,87:101:3609:87:3030:-216.337,0,-268.421	1/1:75:0,75:0:0:75:2643:-238.118,-22.5773,0	1/1:45:0,45:0:0:45:1553:-140.056,-13.5464,0	1/1:83:0,83:0:0:83:2919:-262.943,-24.9855,0	0/1:130:62,67:62:2232:67:2361:-173.553,0,-161.951	1/1:78:0,78:0:0:78:2740:-246.844,-23.4803,0	0/1:82:49,33:49:1756:33:1146:-78.7598,0,-133.64	1/1:267:0,267:0:0:267:9209:-828.822,-80.375,0	1/1:60:0,58:0:0:58:1982:-178.288,-17.4597,0	0/1:61:26,35:26:923:35:1205:-90.3876,0,-65.0239	0/1:68:38,30:38:1360:30:1048:-74.16,0,-102.231	0/1:43:21,22:21:748:22:750:-54.8681,0,-54.701	0/1:54:29,25:29:1023:25:871:-62.4498,0,-76.1261	1/1:76:0,76:0:0:76:2652:-238.927,-22.8783,0	1/1:51:0,51:0:0:51:1786:-161.021,-15.3525,0	0/1:165:74,91:74:2644:91:3177:-236.487,0,-188.537	0/1:141:86,55:86:3088:55:1941:-132.519,0,-235.702	1/1:70:1,69:1:36:69:2442:-216.437,-17.4738,0	0/1:91:66,25:66:2364:25:900:-53.9273,0,-185.625	1/1:100:2,98:2:68:98:3491:-307.944,-23.6453,0	0/1:51:28,23:28:1000:23:784:-55.3279,0,-74.9628	0/1:51:29,22:29:1036:22:784:-55.5314,0,-78.2014	0/1:274:152,122:152:5426:122:4267:-301.725,0,-405.987	1/1:122:0,122:0:0:122:4333:-390.147,-36.7257,0	1/1:24:0,24:0:0:24:852:-77.0004,-7.22472,0	0/1:221:127,94:127:4551:94:3323:-232.761,0,-343.228	1/1:210:7,203:7:252:203:7170:-622.334,-40.1873,0	1/1:115:0,115:0:0:115:4090:-368.289,-34.6185,0	0/1:652:368,284:368:13179:284:10001:-703.547,0,-989.64	1/1:475:1,474:1:32:474:16687:-1498.32,-139.79,0	1/1:891:0,891:0:0:891:31282:-2814.43,-268.218,0	0/1:829:447,382:447:15974:382:13451:-960.851,0,-1187.79	0/1:637:369,268:369:13212:268:9448:-658.541,0,-997.126	0/1:149:70,79:70:2503:79:2741:-202.081,0,-180.668	0/1:209:107,102:107:3821:102:3576:-259.132,0,-281.17	0/1:372:195,177:195:6939:177:6127:-439.566,0,-512.595	0/1:370:186,184:186:6641:184:6464:-470.476,0,-486.388	0/1:157:73,84:73:2628:84:2993:-222.339,0,-189.505	0/1:229:138,91:138:4918:91:3131:-213.087,0,-373.836	0/1:130:42,88:42:1472:88:3063:-236.768,0,-93.6378	0/1:56:29,27:29:1035:27:940:-68.0559,0,-76.6051	0/1:41:23,18:23:828:18:640:-45.5871,0,-62.5019	1/1:46:0,46:0:0:46:1639:-147.798,-13.8474,0	1/1:97:2,95:2:72:95:3371:-296.771,-22.3632,0	0/1:203:104,99:104:3728:99:3505:-254.55,0,-274.611	1/1:117:2,115:2:72:115:4090:-361.45,-28.3838,0	0/1:122:72,50:72:2588:50:1783:-124.026,0,-196.443	0/1:151:83,68:83:2984:68:2386:-169.511,0,-223.336	1/1:610:2,607:2:72:607:21377:-1916.59,-176.85,0	0/1:96:59,37:59:2103:37:1312:-89.4822,0,-160.64	1/1:69:0,69:0:0:69:2447:-220.485,-20.7711,0	0/1:928:504,424:504:18028:424:14931:-1064.19,0,-1342.74	0/1:99:63,36:63:2260:36:1244:-82.4569,0,-173.861	0/1:41:18,23:18:644:23:824:-62.1411,0,-45.9484	0/1:445:251,193:251:8965:193:6828:-480.579,0,-672.815	1/1:516:3,513:3:108:513:18120:-1620.33,-145.256,0	1/1:83:0,82:0:0:82:2896:-260.516,-24.6845,0	1/1:95:0,95:0:0:95:3310:-298.121,-28.5979,0	0/1:339:185,154:185:6624:154:5433:-387.053,0,-494.19	1/1:123:1,122:1:36:122:4288:-382.502,-33.4284,0	1/1:156:1,155:1:36:155:5459:-487.474,-43.3624,0	0/1:71:34,37:34:1205:37:1313:-97.0966,0,-87.3808	1/1:80:0,79:0:0:79:2803:-252.151,-23.7814,0	0/1:174:104,70:104:3736:70:2466:-169.814,0,-283.833	0/1:85:61,24:61:2176:24:856:-51.7736,0,-170.519	1/1:194:0,194:0:0:194:6721:-604.988,-58.3998,0	1/1:66:0,66:0:0:66:2326:-209.597,-19.868,0	0/1:79:38,41:38:1364:41:1435:-105.664,0,-99.2793	0/1:588:346,242:346:12395:242:8538:-591.422,0,-938.379	1/1:63:0,63:0:0:63:2229:-200.873,-18.9649,0	0/1:70:50,20:50:1796:20:712:-43.3346,0,-140.85	1/1:115:1,113:1:36:113:3959:-352.906,-31.079,0	1/1:110:1,109:1:36:109:3835:-341.749,-29.515,0	0/1:135:70,65:70:2499:65:2275:-164.366,0,-184.523	1/1:79:0,79:0:0:79:2760:-248.639,-23.7814,0	1/1:692:2,689:2:72:689:24264:-2176.3,-201.535,0	1/1:92:0,92:0:0:92:3244:-292.183,-27.6948,0	0/1:59:40,19:40:1420:19:680:-43.7684,0,-110.337	0/1:133:81,52:81:2900:52:1789:-121.251,0,-221.199	0/1:87:39,48:39:1387:48:1639:-121.602,0,-98.9385	0/1:49:25,24:25:896:24:844:-61.5285,0,-66.2099	1/1:63:0,63:0:0:63:2186:-197.004,-18.9649,0	0/1:123:62,61:62:2187:61:2050:-147.739,0,-160.067	1/1:37:0,37:0:0:37:1274:-114.959,-11.1381,0	1/1:65:0,65:0:0:65:2232:-201.142,-19.567,0	1/1:54:0,53:0:0:53:1810:-162.818,-15.9546,0	0/1:306:159,147:159:5666:147:5058:-363.271,0,-417.946	0/1:622:296,326:296:10561:326:11254:-825.556,0,-763.166	0/1:62:39,23:39:1404:23:770:-50.9444,0,-107.995	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:57:2,55:2:72:55:1911:-165.431,-10.322,0
chr07	9467735	.	C	T	47879.2	PASS	AB=0.489778;ABP=8.29294;AC=53;AF=0.281915;AN=188;AO=2870;CIGAR=1X;DP=9916;DPB=9916;DPRA=1.21524;EPP=6235.14;EPPR=15301;GTI=0;LEN=1;MEANALT=1;MQM=59.5167;MQMR=59.9462;NS=94;NUMALT=1;ODDS=2.6789;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102707;QR=251763;RO=7045;RPL=2870;RPP=6235.14;RPPR=15301;RPR=0;RUN=1;SAF=0;SAP=6235.14;SAR=2870;SRF=0;SRP=15301;SRR=7045;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:13,24:13:451:24:860:-66.5837,0,-29.7817	0/1:131:66,65:66:2368:65:2324:-169.941,0,-173.943	0/1:125:73,52:73:2599:52:1872:-131.106,0,-196.53	0/1:164:82,82:82:2936:82:2929:-214.335,0,-215.105	0/0:106:106,0:106:3796:0:0:0,-31.9092,-341.708	0/0:82:80,2:80:2851:2:72:0,-17.8477,-249.987	0/0:140:140,0:140:4996:0:0:0,-42.1442,-449.79	0/1:169:96,73:96:3436:73:2609:-183.463,0,-258.571	0/0:105:105,0:105:3751:0:0:0,-31.6081,-337.79	0/1:153:57,96:57:2040:96:3417:-261.641,0,-137.814	0/0:31:31,0:31:1112:0:0:0,-9.33193,-99.7631	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/1:83:32,51:32:1136:51:1832:-140.156,0,-77.5634	0/1:63:26,37:26:932:37:1332:-101.217,0,-65.234	0/1:54:31,23:31:1108:23:824:-58.2277,0,-83.7754	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.65	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.692	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/1:54:27,27:27:955:27:968:-71.149,0,-70.0092	0/1:163:74,89:74:2656:89:3187:-237.976,0,-190.218	0/0:150:150,0:150:5360:0:0:0,-45.1545,-482.529	0/1:65:22,43:22:788:43:1542:-119.49,0,-51.6778	0/0:78:77,1:77:2740:1:36:0,-19.8821,-243.245	0/1:112:69,43:69:2464:43:1544:-105.538,0,-188.299	0/1:76:39,37:39:1404:37:1324:-96.5838,0,-103.781	0/1:386:175,211:175:6256:211:7542:-562.551,0,-446.938	0/0:268:268,0:268:9612:0:0:0,-80.676,-865.026	0/0:44:44,0:44:1564:0:0:0,-13.2453,-141.052	0/1:324:164,160:164:5875:160:5735:-418.507,0,-431.288	0/0:102:101,1:101:3587:1:36:0,-27.1068,-319.436	0/0:126:126,0:126:4524:0:0:0,-37.9298,-407.326	0/1:47:19,28:19:680:28:1008:-76.8879,0,-47.3808	0/0:54:53,0:53:1875:0:0:0,-15.9546,-168.669	0/0:12:12,0:12:416:0:0:0,-3.61236,-37.7716	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:12:4,8:4:144:8:283:-22.1421,0,-9.70126	0/1:191:93,98:93:3300:98:3502:-257.315,0,-239.666	0/1:195:118,77:118:4228:77:2748:-188.688,0,-321.994	0/1:60:24,36:24:864:36:1296:-98.8374,0,-60.0208	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:161:76,85:76:2703:85:3050:-225.911,0,-195.049	0/1:37:16,21:16:572:21:741:-55.8679,0,-40.6753	0/1:134:69,65:69:2467:65:2336:-170.147,0,-181.945	0/1:103:58,45:58:2080:45:1601:-113.306,0,-156.464	0/1:58:27,31:27:954:31:1116:-83.2896,0,-68.7142	0/0:132:132,0:132:4725:0:0:0,-39.736,-425.404	0/0:162:162,0:162:5787:0:0:0,-48.7669,-519.833	0/1:224:122,102:122:4341:102:3654:-261.611,0,-323.428	0/0:99:99,0:99:3539:0:0:0,-29.802,-318.633	0/1:168:94,74:94:3372:74:2660:-189.068,0,-253.122	0/1:233:130,103:130:4656:103:3708:-263.646,0,-349.062	0/1:26:18,8:18:648:8:288:-18.4406,0,-50.8251	0/1:174:78,96:78:2795:96:3448:-258.104,0,-199.41	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/1:30:10,20:10:356:20:716:-55.7286,0,-23.3503	0/1:154:110,44:110:3912:44:1566:-94.4856,0,-305.917	0/1:43:22,21:22:784:21:742:-54.156,0,-57.9396	0/1:20:17,3:17:596:3:108:-4.05457,0,-47.9472	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:126:126,0:126:4505:0:0:0,-37.9298,-405.617	0/0:97:96,1:96:3428:1:36:0,-25.6016,-305.136	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/0:207:207,0:207:7377:0:0:0,-62.3132,-663.489	0/0:246:241,5:241:8595:5:180:0,-57.5013,-756.97	0/1:78:42,36:42:1508:36:1287:-92.5773,0,-112.534	0/0:97:97,0:97:3466:0:0:0,-29.1999,-312.103	0/1:196:90,106:90:3220:106:3781:-281.476,0,-231.021	0/1:108:48,60:48:1720:60:2139:-160.256,0,-122.573	0/0:16:16,0:16:564:0:0:0,-4.81648,-51.0903	0/0:95:95,0:95:3399:0:0:0,-28.5978,-306.124	0/1:72:29,43:29:1040:43:1531:-116.368,0,-72.2402	0/1:10:4,6:4:144:6:210:-16.2075,0,-10.3033	0/0:48:47,1:47:1688:1:36:0,-10.8512,-148.609	0/1:89:45,44:45:1616:44:1580:-115.692,0,-118.938	0/0:182:180,2:180:6440:2:72:0,-47.9507,-572.848	0/0:217:217,0:217:7762:0:0:0,-65.3235,-698.608	0/1:143:77,66:77:2751:66:2368:-170.258,0,-204.74	0/0:151:146,5:146:5211:5:180:0,-28.9118,-452.586	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:153:152,1:152:5431:1:36:0,-42.4593,-485.317	0/1:104:70,34:70:2495:34:1188:-75.8349,0,-193.306	0/1:233:133,100:133:4768:100:3576:-251.894,0,-359.137	0/1:97:61,36:61:2166:36:1292:-87.3839,0,-166.005	0/1:50:25,25:25:900:25:900:-66.2672,0,-66.2695	0/1:94:45,49:45:1612:49:1750:-129.458,0,-117.073	0/1:128:57,71:57:2036:71:2552:-191.37,0,-144.979	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:88:88,0:88:3156:0:0:0,-26.4906,-284.265	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.784	0/1:35:22,13:22:779:13:457:-30.9242,0,-59.8914	0/1:77:38,39:38:1355:39:1391:-102.274,0,-99.0704	0/1:56:22,34:22:775:34:1213:-92.615,0,-53.2135	0/0:159:159,0:159:5667:0:0:0,-47.8638,-510.138	0/0:92:92,0:92:3274:0:0:0,-27.6948,-294.88
chr07	12827740	.	C	T	335972	PASS	AB=0.486429;ABP=20.338;AC=134;AF=0.712766;AN=188;AO=12751;CIGAR=1X;DP=18347;DPB=18347;DPRA=0;EPP=27674.1;EPPR=12148.1;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9882;MQMR=59.99;NS=94;NUMALT=1;ODDS=3.04995;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=454753;QR=197567;RO=5593;RPL=7080;RPP=341.1;RPPR=134.068;RPR=5671;RUN=1;SAF=7080;SAP=341.1;SAR=5671;SRF=3087;SRP=134.068;SRR=2506;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:123:57,66:57:2015:66:2340:-173.831,0,-144.596	0/1:262:142,120:142:5028:120:4279:-306.416,0,-373.798	0/1:229:111,118:111:3944:118:4244:-313.201,0,-286.216	0/1:377:209,168:209:7432:168:5996:-426.258,0,-555.438	1/1:194:0,194:0:0:194:6924:-623.228,-58.3998,0	1/1:91:0,91:0:0:91:3243:-292.092,-27.3937,0	1/1:284:2,282:2:72:282:10030:-895.801,-78.6558,0	0/1:311:149,162:149:5252:162:5808:-429.212,0,-379.199	1/1:239:2,237:2:68:237:8444:-753.508,-65.4885,0	0/1:204:112,91:112:3971:91:3199:-226.663,0,-296.112	1/1:125:0,125:0:0:125:4466:-402.11,-37.6288,0	1/1:219:1,218:1:21:218:7743:-694.802,-63.8256,0	0/1:156:83,73:83:2929:73:2590:-186.389,0,-216.882	0/1:143:73,70:73:2527:70:2508:-182.925,0,-184.633	0/1:141:63,78:63:2252:78:2771:-207.186,0,-160.498	1/1:129:0,129:0:0:129:4607:-414.795,-38.8329,0	1/1:116:0,116:0:0:116:4147:-373.413,-34.9195,0	1/1:99:0,99:0:0:99:3552:-319.888,-29.802,0	0/1:86:45,41:45:1576:41:1449:-104.815,0,-116.239	0/1:357:189,168:189:6710:168:6011:-433.627,0,-496.512	1/1:300:0,300:0:0:300:10714:-964.168,-90.309,0	0/1:145:98,47:98:3461:47:1688:-108.558,0,-268.052	1/1:164:0,164:0:0:164:5848:-526.432,-49.3689,0	0/1:241:74,167:74:2599:167:5945:-462.609,0,-161.61	0/1:208:116,92:116:4111:92:3308:-235.323,0,-307.562	0/1:537:258,278:258:9114:278:9912:-730.295,0,-658.446	1/1:520:0,520:0:0:520:18610:-1674.47,-156.536,0	1/1:83:0,83:0:0:83:2941:-264.922,-24.9855,0	0/1:610:323,287:323:11441:287:10264:-740.057,0,-845.947	1/1:243:9,234:9:324:234:8313:-718.674,-43.6444,0	1/1:193:1,192:1:36:192:6849:-612.882,-54.5005,0	0/1:21:14,7:14:504:7:252:-16.7073,0,-39.3765	1/1:28:0,28:0:0:28:1000:-90.3154,-8.42884,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:24:9,15:9:309:15:528:-40.6266,0,-20.916	0/1:464:244,220:244:8533:220:7841:-566.04,0,-628.305	0/1:221:120,101:120:4250:101:3613:-258.842,0,-316.152	0/1:120:55,65:55:1955:65:2293:-170.504,0,-140.101	0/1:11:9,2:9:315:2:72:-3.52539,0,-25.3759	0/1:276:131,145:131:4611:145:5137:-379.388,0,-332.072	0/1:72:34,38:34:1204:38:1352:-100.306,0,-86.9917	0/1:350:161,189:161:5713:189:6741:-501.404,0,-408.929	0/1:140:70,70:70:2473:70:2520:-184.907,0,-180.679	0/1:155:78,77:78:2768:77:2748:-200.895,0,-202.701	1/1:239:0,239:0:0:239:8511:-765.991,-71.9462,0	1/1:235:0,235:0:0:235:8380:-754.199,-70.7421,0	0/1:297:148,148:148:5244:148:5279:-385.783,0,-382.632	1/1:265:0,265:0:0:265:9442:-849.741,-79.773,0	0/1:262:138,124:138:4906:124:4407:-317.934,0,-362.821	0/1:232:119,113:119:4222:113:3990:-289.449,0,-310.321	0/1:14:7,7:7:252:7:252:-18.8145,0,-18.8145	0/1:261:118,143:118:4200:143:5128:-383.092,0,-299.612	1/1:73:0,73:0:0:73:2624:-236.407,-21.9752,0	0/1:26:19,7:19:650:7:228:-13.0113,0,-50.9896	0/1:276:147,129:147:5203:129:4600:-331.079,0,-385.328	0/1:83:45,38:45:1592:38:1364:-98.0752,0,-118.582	0/1:17:11,6:11:396:6:216:-14.673,0,-30.8652	1/1:37:0,37:0:0:37:1311:-118.291,-11.1381,0	1/1:137:1,136:1:36:136:4845:-432.607,-37.6428,0	1/1:212:0,212:0:0:212:7560:-680.441,-63.8184,0	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	1/1:312:1,311:1:36:311:11130:-997.989,-90.3231,0	1/1:436:8,428:8:270:428:15227:-1344.89,-106.621,0	0/1:173:92,81:92:3278:81:2887:-207.988,0,-243.162	1/1:147:0,147:0:0:147:5222:-470.116,-44.2514,0	0/1:309:176,133:176:6226:133:4743:-334.009,0,-467.421	0/1:210:137,73:137:4857:73:2612:-172.112,0,-374.068	1/1:76:0,76:0:0:76:2698:-243.064,-22.8783,0	1/1:114:0,114:0:0:114:4067:-366.213,-34.3174,0	0/1:142:52,90:52:1833:90:3232:-248.355,0,-122.502	0/1:56:25,31:25:887:31:1112:-83.5337,0,-63.2904	1/1:189:0,189:0:0:189:6749:-607.484,-56.8947,0	0/1:191:85,106:85:2982:106:3793:-284.07,0,-211.07	1/1:318:0,318:0:0:318:11312:-1017.95,-95.7275,0	1/1:290:0,290:0:0:290:10306:-927.465,-87.2987,0	0/1:262:146,116:146:5115:116:4134:-293.372,0,-381.625	1/1:177:3,174:3:93:174:6225:-551.669,-44.6056,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:298:1,297:1:36:297:10626:-952.646,-86.1087,0	0/1:216:115,101:115:4082:101:3583:-257.655,0,-302.544	0/1:478:251,227:251:8825:227:8116:-586.562,0,-650.353	0/1:202:95,107:95:3343:107:3819:-283.013,0,-240.281	0/1:163:88,75:88:3074:75:2673:-191.746,0,-227.82	0/1:169:86,83:86:3048:83:2975:-217.108,0,-223.674	0/1:328:150,178:150:5253:178:6333:-471.327,0,-374.173	1/1:88:0,88:0:0:88:3139:-282.736,-26.4906,0	1/1:167:1,166:1:36:166:5916:-528.951,-46.6737,0	1/1:157:2,155:2:72:155:5484:-486.853,-40.425,0	0/1:65:34,31:34:1193:31:1101:-79.8314,0,-88.1062	0/1:244:130,114:130:4580:114:4065:-292.585,0,-338.917	0/1:160:115,45:115:4049:45:1608:-96.8453,0,-316.435	1/1:251:0,251:0:0:251:8980:-808.178,-75.5585,0	1/1:241:1,240:1:36:240:8577:-768.329,-68.95,0
chr07	15364604	.	C	T	95651	PASS	AB=0.328542;ABP=8298.96;AC=48;AF=0.255319;AN=188;AO=10747;CIGAR=1X;DP=54435;DPB=54435;DPRA=1.80792;EPP=23313.8;EPPR=94679.3;GTI=6;LEN=1;MEANALT=1.06452;MQM=27.1776;MQMR=23.9804;NS=94;NUMALT=1;ODDS=6.07255;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=381422;QR=1549142;RO=43680;RPL=8770;RPP=9326.75;RPPR=27066;RPR=1977;RUN=1;SAF=8767;SAP=9310.29;SAR=1980;SRF=33498;SRP=27028.9;SRR=10182;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:239:179,60:179:6256:60:2140:-25.5258,0,-241.487	0/1:867:676,191:676:23985:191:6789:-111.26,0,-962.862	0/1:779:639,140:639:22681:140:4950:-17.4335,0,-876.055	0/0:652:650,2:650:23120:2:72:0,-191.955,-1358.28	0/0:389:388,1:388:13732:1:36:0,-116.102,-807.346	0/0:321:321,0:321:11375:0:0:0,-96.6306,-641.646	0/0:472:472,0:472:16835:0:0:0,-142.086,-981.066	0/1:700:535,165:535:19034:165:5846:-100.231,0,-776.478	0/1:663:471,192:471:16670:192:6851:-163.762,0,-694.139	0/1:568:404,164:404:14327:164:5789:-164.591,0,-618.44	0/1:427:292,135:292:10337:135:4786:-220.437,0,-496.727	0/0:186:186,0:186:6563:0:0:0,-55.9916,-342.397	0/1:227:178,49:178:6252:49:1735:-6.35255,0,-241.56	0/1:236:187,49:187:6604:49:1744:-9.61665,0,-267.987	0/0:127:127,0:127:4516:0:0:0,-38.2308,-260.956	0/1:199:164,35:164:5761:35:1212:-8.20129,0,-252.314	0/0:283:234,49:234:8282:49:1764:0,-7.2692,-316.906	0/0:117:117,0:117:4154:0:0:0,-35.2205,-220.021	0/0:301:301,0:301:10689:0:0:0,-90.61,-630.748	0/1:1273:997,276:997:35445:276:9730:-217.159,0,-1571.64	0/1:891:722,169:722:25505:169:6020:-139.76,0,-1111.54	0/0:298:298,0:298:10553:0:0:0,-89.7069,-645.048	0/1:440:348,92:348:12334:92:3271:-71.9894,0,-511.832	0/1:561:399,162:399:14172:162:5709:-150.841,0,-615.346	0/1:394:286,108:286:10139:108:3841:-100.659,0,-386.445	0/0:854:854,0:854:30318:0:0:0,-257.08,-1892.32	0/0:873:873,0:873:31009:0:0:0,-262.799,-1748.33	0/0:127:127,0:127:4502:0:0:0,-38.2308,-224.113	0/1:1312:1014,298:1014:36051:298:10564:-311.323,0,-1523.05	0/1:530:405,125:405:14401:125:4441:-116.72,0,-589.781	0/1:719:558,161:558:19775:161:5716:-154.643,0,-921.377	0/0:1609:1608,1:1608:57161:1:36:0,-481.058,-4141.81	0/0:1305:1304,1:1304:46427:1:36:0,-391.845,-3306.76	0/1:1308:716,590:716:25235:590:20942:-966.281,0,-1296.28	0/1:2313:1124,1189:1124:39653:1189:42300:-2047.79,0,-1948.4	0/0:1601:1600,1:1600:56805:1:36:0,-479.39,-3769.47	0/1:707:546,161:546:19295:161:5714:-114.902,0,-833.608	0/0:361:361,0:361:12850:0:0:0,-108.672,-746.453	0/1:488:326,162:326:11517:162:5752:-186.768,0,-519.875	0/1:939:545,394:545:19320:394:13946:-840.972,0,-1100.89	0/0:709:708,0:708:25086:0:0:0,-213.129,-1390.05	0/0:239:239,0:239:8478:0:0:0,-71.9462,-556.224	0/1:777:569,208:569:20235:208:7358:-180.73,0,-814.527	0/1:325:262,63:262:9245:63:2256:-36.1706,0,-377.789	0/1:201:149,52:149:5259:52:1838:-42.4707,0,-214.954	0/0:346:344,2:344:12238:2:72:0,-97.7122,-703.143	0/1:550:411,139:411:14567:139:4936:-97.1464,0,-603.794	0/0:559:559,0:559:19850:0:0:0,-168.276,-1147.27	0/0:384:383,0:383:13618:0:0:0,-115.294,-764.454	0/1:669:517,152:517:18367:152:5407:-159.186,0,-801.248	0/0:512:512,0:512:18125:0:0:0,-154.127,-1032.32	0/1:1343:756,587:756:26902:587:20803:-1264,0,-1474.45	0/0:542:542,0:542:19353:0:0:0,-163.158,-1046.33	0/1:203:159,44:159:5629:44:1551:-35.7684,0,-243.328	0/1:1251:634,617:634:22424:617:21915:-1032.39,0,-1079.83	0/1:686:575,111:575:20351:111:3901:-11.0542,0,-858.974	0/0:209:209,0:209:7412:0:0:0,-62.9153,-455.099	0/1:1331:699,632:699:24814:632:22487:-1382.58,0,-1338.68	0/0:1377:1373,4:1373:48701:4:144:0,-402.67,-3421.07	0/1:413:298,114:298:10612:114:4019:-57.4708,0,-443.371	0/0:228:228,0:228:8078:0:0:0,-68.6348,-471.117	0/1:1002:496,506:496:17624:506:17939:-1147.87,0,-936.209	0/0:286:286,0:286:10158:0:0:0,-86.0946,-562.58	0/0:646:644,1:644:22872:1:36:0,-193.094,-1362.88	0/1:398:303,94:303:10722:94:3319:-72.7756,0,-451.014	0/0:412:412,0:412:14605:0:0:0,-124.024,-851.363	0/0:612:606,6:606:21489:6:216:0,-166.328,-1306.87	0/0:443:443,0:443:15767:0:0:0,-133.356,-903.255	0/0:217:216,1:216:7627:1:36:0,-62.0245,-506.062	0/0:317:317,0:317:11213:0:0:0,-95.4265,-630.64	0/0:168:167,0:167:5900:0:0:0,-50.272,-346.514	0/1:825:478,347:478:16999:347:12342:-706.748,0,-913.18	0/1:346:220,126:220:7772:126:4461:-114.976,0,-302.507	0/1:349:260,89:260:9189:89:3157:-56.0643,0,-375.329	0/1:973:751,222:751:26586:222:7857:-161.927,0,-1095.28	0/0:531:531,0:531:18877:0:0:0,-159.847,-1114.76	0/0:450:450,0:450:15953:0:0:0,-135.463,-912.894	0/0:387:387,0:387:13733:0:0:0,-116.499,-767.2	0/1:1614:794,820:794:28099:820:29277:-1400.93,0,-1378.18	0/0:434:433,1:433:15385:1:36:0,-129.648,-896.312	0/0:396:396,0:396:13906:0:0:0,-119.208,-814.985	0/0:761:761,0:761:27029:0:0:0,-229.084,-1578.03	0/1:349:285,64:285:10131:64:2263:-13.9904,0,-426.401	0/0:101:101,0:101:3583:0:0:0,-30.404,-199.014	0/1:265:205,60:205:7213:60:2123:-33.0237,0,-300.624	0/1:469:370,99:370:13144:99:3482:-36.9511,0,-554.529	0/1:147:102,45:102:3644:45:1596:-29.0777,0,-133.886	0/0:188:187,1:187:6579:1:36:0,-53.8574,-350.389	0/0:161:161,0:161:5735:0:0:0,-48.4658,-297.1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chr07	15653667	.	GC	GT	136853	PASS	AB=0.481235;ABP=19.0653;AC=134;AF=0.712766;AN=188;AO=6663;CIGAR=1M1X;DP=9419;DPB=9420;DPRA=0;EPP=14471.5;EPPR=5952.84;GTI=0;LEN=1;MEANALT=1.17021;MQM=59.9081;MQMR=59.9843;NS=94;NUMALT=1;ODDS=0.741689;PAIRED=0;PAIREDR=0;PAO=1;PQA=34;PQR=34;PRO=1;QA=237776;QR=96119;RO=2740;RPL=6663;RPP=14471.5;RPPR=5952.84;RPR=0;RUN=1;SAF=6663;SAP=14471.5;SAR=0;SRF=2740;SRP=5952.84;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:26,38:26:902:38:1360:-102.989,0,-61.8686	0/1:101:55,46:55:1919:46:1643:-117.746,0,-142.578	0/1:222:125,97:125:4380:97:3475:-246.132,0,-327.55	0/1:205:102,103:102:3600:103:3688:-270.409,0,-262.497	1/1:72:0,71:0:0:71:2534:-227.297,-21.3731,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:61:0,61:0:0:61:2160:-194.665,-18.3628,0	0/1:148:74,74:74:2601:74:2600:-189.693,0,-189.786	1/1:369:0,368:0:0:368:13020:-1171.27,-110.779,0	0/1:55:28,26:28:962:26:932:-67.6796,0,-70.3686	1/1:37:0,37:0:0:37:1303:-117.569,-11.1381,0	1/1:69:0,68:0:0:68:2444:-219.995,-20.47,0	0/1:60:34,26:34:1192:26:928:-65.7763,0,-89.521	0/1:100:61,39:61:2110:39:1379:-94.0339,0,-160.034	0/1:52:30,22:30:1076:22:784:-55.2304,0,-81.4995	1/1:53:0,53:0:0:53:1904:-171.638,-15.9546,0	1/1:29:0,29:0:0:29:1032:-93.171,-8.72987,0	1/1:26:0,26:0:0:26:919:-83.0262,-7.82678,0	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:191:114,77:114:4048:77:2764:-191.444,0,-306.951	1/1:82:0,82:0:0:82:2922:-263.213,-24.6845,0	0/1:202:127,75:127:4421:75:2672:-179.915,0,-337.256	1/1:127:3,124:3:98:124:4438:-389.889,-29.0875,0	0/1:46:18,28:18:628:28:1004:-76.8273,0,-42.997	0/1:101:51,50:51:1788:50:1779:-129.901,0,-130.796	0/1:261:117,144:117:4085:144:5160:-385.967,0,-289.268	1/1:276:0,276:0:0:276:9872:-888.419,-83.0843,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:314:148,165:148:5200:165:5877:-434.402,0,-373.56	1/1:165:8,157:8:288:157:5578:-475.871,-23.4025,0	1/1:132:1,131:1:36:131:4679:-417.673,-36.1377,0	0/1:29:4,25:4:144:25:896:-72.2281,0,-4.58375	1/1:45:0,44:0:0:44:1546:-139.107,-13.2453,0	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	0/1:13:9,4:9:309:4:144:-9.40023,0,-24.2284	0/1:31:20,11:20:690:11:396:-26.6508,0,-53.0865	0/1:118:63,55:63:2189:55:1968:-141.874,0,-161.751	0/1:119:60,58:60:2106:58:2071:-150.779,0,-153.927	0/1:44:27,17:27:950:17:604:-41.4453,0,-72.5687	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:117:63,54:63:2194:54:1923:-138.124,0,-162.498	0/1:30:22,8:22:774:8:288:-17.2365,0,-60.9506	0/1:213:90,123:90:3174:123:4399:-331.818,0,-221.766	0/1:32:14,18:14:492:18:648:-49.0138,0,-34.9793	0/1:34:16,17:16:555:17:604:-44.3966,0,-39.9838	1/1:164:0,163:0:0:163:5844:-525.82,-49.0679,0	1/1:184:2,181:2:72:181:6494:-577.705,-48.6116,0	0/1:196:97,99:97:3388:99:3519:-257.914,0,-246.131	1/1:124:0,124:0:0:124:4443:-400.016,-37.3277,0	0/1:128:55,73:55:1926:73:2595:-195.266,0,-135.081	0/1:101:49,52:49:1734:52:1855:-136.825,0,-125.939	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/1:160:80,80:80:2839:80:2867:-210.101,0,-207.583	1/1:68:0,68:0:0:68:2410:-217.146,-20.47,0	0/1:23:11,12:11:394:12:432:-32.2975,0,-28.8778	0/1:187:105,82:105:3658:82:2917:-206.471,0,-273.132	0/1:49:27,22:27:940:22:792:-56.8552,0,-70.1617	0/1:18:9,9:9:324:9:324:-24.0873,0,-24.0873	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:33:1,32:1:36:32:1152:-100.391,-6.33572,0	1/1:87:1,86:1:36:86:3040:-270.231,-22.5913,0	0/1:15:8,7:8:288:7:248:-18.1487,0,-21.752	1/1:217:0,217:0:0:217:7783:-700.498,-65.3235,0	1/1:178:1,177:1:23:177:6337:-568.1,-51.2834,0	0/1:54:19,35:19:656:35:1260:-97.4495,0,-43.1049	1/1:116:2,113:2:70:113:4037:-356.866,-28.3276,0	0/1:225:113,112:113:3946:112:3999:-292.265,0,-287.602	0/1:165:105,60:105:3669:60:2160:-144.939,0,-280.744	1/1:26:1,25:1:36:25:896:-77.3617,-4.22851,0	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	0/1:36:21,15:21:743:15:536:-37.7377,0,-56.3554	0/1:26:14,12:14:492:12:428:-31.032,0,-36.7852	1/1:148:0,147:0:0:147:5250:-472.277,-44.2514,0	0/1:55:29,26:29:1035:26:936:-67.9804,0,-76.9073	1/1:376:1,375:1:23:375:13271:-1191.32,-110.887,0	1/1:171:0,170:0:0:170:6071:-546.126,-51.1751,0	0/1:168:84,83:84:2945:83:2972:-217.081,0,-214.651	1/1:103:2,101:2:72:101:3606:-317.909,-24.1694,0	1/1:23:0,23:0:0:23:823:-74.393,-6.92369,0	1/1:143:0,143:0:0:143:5112:-460.223,-43.0473,0	0/1:109:58,51:58:2039:51:1827:-131.876,0,-150.968	0/1:213:101,111:101:3568:111:3943:-290.902,0,-257.17	0/1:43:31,12:31:1085:12:432:-26.2769,0,-85.0121	0/1:48:26,22:26:932:22:788:-56.7945,0,-69.7496	0/1:38:22,16:22:766:16:572:-40.3743,0,-57.8196	0/1:102:51,51:51:1787:51:1828:-134.095,0,-130.405	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	1/1:55:0,55:0:0:55:1976:-178.115,-16.5567,0	1/1:77:1,76:1:36:76:2726:-241.984,-19.581,0	0/1:36:16,20:16:563:20:716:-53.9302,0,-40.1618	0/1:83:46,37:46:1636:37:1322:-94.2936,0,-122.543	0/1:45:31,14:31:1091:14:500:-31.788,0,-84.952	1/1:139:0,139:0:0:139:4964:-446.901,-41.8432,0	1/1:76:0,76:0:0:76:2704:-243.602,-22.8783,0
chr07	15811026	.	C	A	51858.3	PASS	AB=0.322229;ABP=3373.02;AC=92;AF=0.489362;AN=188;AO=3956;CIGAR=1X;DP=12301;DPB=12301;DPRA=11.1205;EPP=8593.36;EPPR=18100.1;GTI=14;LEN=1;MEANALT=1.1087;MQM=59.9912;MQMR=59.9993;NS=94;NUMALT=1;ODDS=0.521939;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141282;QR=297491;RO=8334;RPL=3956;RPP=8593.36;RPPR=18100.1;RPR=0;RUN=1;SAF=0;SAP=8593.36;SAR=3956;SRF=0;SRP=18100.1;SRR=8334;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:131:100,31:100:3556:31:1112:-60.9564,0,-280.816	0/1:80:65,15:65:2332:15:540:-24.8541,0,-186.057	0/1:247:205,42:205:7286:42:1497:-60.6681,0,-581.441	0/1:298:230,68:230:8202:68:2424:-128.709,0,-648.487	0/1:86:38,48:38:1364:48:1712:-128.477,0,-97.1721	0/1:49:27,22:27:968:22:788:-56.4943,0,-72.6869	0/1:145:89,56:89:3177:56:2004:-136.984,0,-242.504	0/1:218:160,58:160:5702:58:2072:-121.126,0,-447.675	0/1:168:79,89:79:2821:89:3176:-235.492,0,-203.555	0/1:129:91,38:91:3260:38:1368:-84.588,0,-254.788	0/1:75:39,36:39:1396:36:1287:-93.5555,0,-103.362	0/1:189:105,83:105:3752:83:2975:-211.028,0,-280.927	0/1:116:87,29:87:3115:29:1044:-59.3553,0,-245.657	0/1:65:56,9:56:2000:9:324:-9.93891,0,-160.707	0/1:106:80,26:80:2847:26:932:-52.2897,0,-224.559	0/1:84:50,34:50:1792:34:1220:-84.8203,0,-136.276	0/1:45:24,21:24:860:21:756:-54.8209,0,-64.1755	0/1:47:29,18:29:1036:18:635:-43.3286,0,-79.4055	0/1:64:48,16:48:1710:16:576:-32.9091,0,-134.918	0/1:265:211,54:211:7539:54:1936:-94.7434,0,-598.779	0/1:242:111,131:111:3922:131:4686:-349.051,0,-280.325	0/1:135:115,20:115:4081:20:720:-24.4897,0,-326.839	0/1:129:69,59:69:2472:59:2100:-150.427,0,-183.891	0/1:67:44,23:44:1572:23:824:-54.3143,0,-121.603	0/1:198:147,51:147:5249:51:1824:-104.837,0,-412.943	0/1:305:230,75:230:8240:75:2672:-148.912,0,-649.796	0/1:327:171,155:171:6120:155:5552:-401.307,0,-452.405	0/1:45:23,22:23:820:22:792:-58.0593,0,-60.5762	0/1:251:194,57:194:6911:57:2044:-108.673,0,-546.497	0/1:116:59,57:59:2108:57:2034:-148.412,0,-155.07	0/1:119:67,52:67:2408:52:1847:-130.687,0,-181.154	0/1:30:26,4:26:924:4:144:-4.28272,0,-74.4468	0/1:28:13,15:13:453:15:536:-40.146,0,-32.6708	0/1:5:3,2:3:104:2:72:-5.33157,0,-8.19766	0/1:10:8,2:8:284:2:72:-3.82642,0,-22.8931	0/1:20:14,5:14:504:5:180:-10.4727,0,-39.6187	0/1:302:238,64:238:8472:64:2270:-113.649,0,-671.575	0/1:134:94,40:94:3349:40:1436:-89.1996,0,-261.288	0/1:94:75,19:75:2663:19:674:-32.6904,0,-211.62	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:208:171,37:171:6116:37:1324:-56.8479,0,-487.927	0/1:50:40,10:40:1432:10:360:-17.6928,0,-114.126	0/1:256:199,57:199:7128:57:2028:-105.729,0,-564.514	0/1:92:70,21:70:2496:21:752:-40.2526,0,-197.14	0/1:98:75,23:75:2651:23:796:-42.454,0,-209.337	0/1:191:115,76:115:4100:76:2703:-186.018,0,-311.69	0/1:158:94,64:94:3345:64:2292:-158.979,0,-253.704	0/1:231:176,55:176:6260:55:1948:-106.057,0,-493.962	0/1:138:76,62:76:2704:62:2203:-156.994,0,-202.063	0/1:134:105,29:105:3741:29:1036:-53.2159,0,-296.548	0/1:204:164,40:164:5855:40:1422:-66.8664,0,-465.653	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:258:192,66:192:6884:66:2376:-136.432,0,-541.961	0/1:70:36,34:36:1284:34:1216:-88.6745,0,-94.7913	0/1:26:22,4:22:784:4:144:-5.48684,0,-63.0571	0/1:209:161,48:161:5708:48:1704:-90.7307,0,-450.927	0/1:42:29,13:29:1036:13:460:-29.0921,0,-80.9107	0/1:17:10,7:10:345:7:252:-17.9114,0,-26.2633	0/1:34:9,25:9:320:25:896:-70.7253,0,-18.9073	0/1:110:63,47:63:2237:47:1657:-116.303,0,-168.479	0/1:135:78,57:78:2796:57:2032:-142.512,0,-211.241	0/1:24:19,5:19:680:5:180:-9.32734,0,-54.3044	0/1:214:119,95:119:4245:95:3383:-240.267,0,-317.808	0/1:168:92,76:92:3296:76:2732:-195.549,0,-246.286	0/1:93:75,18:75:2688:18:644:-30.2948,0,-214.169	0/1:129:57,72:57:2028:72:2568:-192.501,0,-143.96	0/1:187:144,43:144:5121:43:1536:-82.2405,0,-404.742	0/1:223:193,30:193:6917:30:1060:-28.5805,0,-555.464	0/1:60:30,30:30:1076:30:1067:-78.2794,0,-79.0911	0/1:68:36,32:36:1284:32:1148:-83.1598,0,-95.3934	0/1:69:52,17:52:1846:17:612:-34.6424,0,-145.648	0/1:43:35,8:35:1243:8:288:-13.3231,0,-99.2296	0/1:207:121,86:121:4325:86:3064:-213.677,0,-327.111	0/1:147:117,30:117:4178:30:1076:-52.9014,0,-331.95	0/1:159:72,87:72:2580:87:3095:-230.915,0,-184.585	0/1:251:148,101:148:5292:101:3618:-250.509,0,-401.1	0/1:174:131,43:131:4680:43:1499:-82.8201,0,-368.983	0/1:187:88,99:88:3148:99:3542:-262.696,0,-227.253	0/1:33:15,18:15:536:18:638:-47.8148,0,-38.6408	0/1:173:97,76:97:3463:76:2713:-192.334,0,-259.804	0/1:124:101,22:101:3616:22:788:-33.8584,0,-288.259	0/1:361:271,89:271:9665:89:3184:-178.053,0,-761.072	0/1:105:81,24:81:2890:24:856:-45.753,0,-228.727	0/1:91:64,27:64:2295:27:972:-60.4042,0,-179.417	0/1:60:39,21:39:1396:21:743:-49.1315,0,-107.877	0/1:198:148,50:148:5312:50:1796:-102.318,0,-418.609	0/1:40:22,18:22:792:18:644:-46.2494,0,-59.5645	0/1:128:78,49:78:2775:49:1748:-119.014,0,-211.401	0/1:126:72,54:72:2572:54:1935:-136.496,0,-193.8	0/1:51:44,7:44:1559:7:252:-7.67643,0,-125.248	0/1:114:84,30:84:2985:30:1076:-62.8354,0,-234.564	0/1:115:96,19:96:3443:19:684:-27.2719,0,-275.463	0/1:120:64,55:64:2300:55:1976:-141.932,0,-171.078	0/1:210:106,104:106:3812:104:3707:-270.613,0,-280.06
chr07	16870327	.	G	A	189121	PASS	AB=0.31594;ABP=11744.1;AC=94;AF=0.5;AN=188;AO=12606;CIGAR=1X;DP=39900;DPB=39900;DPRA=0;EPP=14709.9;EPPR=57499.5;GTI=13;LEN=1;MEANALT=1.06383;MQM=46.2357;MQMR=34.4168;NS=94;NUMALT=1;ODDS=5.9347;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=448745;QR=971974;RO=27288;RPL=0;RPP=27376.6;RPPR=59258.1;RPR=12606;RUN=1;SAF=1683;SAP=14709.9;SAR=10923;SRF=204;SRP=57499.5;SRR=27084;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:138:67,71:67:2400:71:2505:-168.126,0,-147.054	0/1:713:508,205:508:18109:205:7308:-422.008,0,-1225.19	0/1:591:346,245:346:12326:245:8697:-542.71,0,-801.289	0/1:864:705,159:705:25109:159:5670:-243.32,0,-1709.81	0/1:280:145,135:145:5172:135:4827:-325.269,0,-350.24	0/1:282:173,109:173:6182:109:3904:-233.575,0,-401.241	0/1:562:361,201:361:12885:201:7189:-474.276,0,-829.498	0/1:802:556,246:556:19676:246:8725:-449.031,0,-1331.3	0/1:275:168,106:168:5956:106:3778:-228.195,0,-379.557	0/1:519:375,144:375:13374:144:5126:-274.945,0,-907.69	0/1:479:326,153:326:11627:153:5458:-324.252,0,-772.487	0/1:294:206,88:206:7274:88:3121:-186.148,0,-489.354	0/1:286:179,107:179:6416:107:3791:-227.618,0,-411.354	0/1:523:339,184:339:12050:184:6542:-397.127,0,-803.585	0/1:287:209,78:209:7491:78:2779:-160.569,0,-509.481	0/1:282:207,75:207:7383:75:2679:-142.727,0,-510.282	0/1:393:293,100:293:10451:100:3550:-191.051,0,-709.927	0/1:245:202,43:202:7224:43:1529:-60.5576,0,-500.024	0/1:274:204,70:204:7290:70:2489:-135.774,0,-492.46	0/1:924:590,333:590:20943:333:11908:-789.238,0,-1384.9	0/1:486:297,189:297:10620:189:6731:-419.95,0,-669.677	0/1:286:177,109:177:6278:109:3866:-261.54,0,-314.379	0/1:209:105,104:105:3724:104:3731:-264.786,0,-224.291	0/1:453:223,230:223:7911:230:8240:-576.425,0,-493.986	0/1:278:157,120:157:5595:120:4247:-269.065,0,-358.909	0/1:1302:1098,204:1098:39060:204:7269:-256.249,0,-2506.52	0/1:924:568,356:568:20162:356:12698:-852.884,0,-1286.4	0/1:162:101,61:101:3603:61:2171:-145.652,0,-242.768	0/1:1385:958,427:958:34141:427:15142:-885.856,0,-1962.93	0/1:466:240,226:240:8521:226:8035:-544.742,0,-534.554	0/1:303:218,85:218:7795:85:3047:-179.572,0,-504.601	0/1:14:7,7:7:243:7:251:-17.5664,0,-15.021	0/1:58:45,13:45:1616:13:468:-24.0597,0,-113.504	0/1:20:15,5:15:536:5:161:-7.72281,0,-29.994	0/1:45:30,15:30:1068:15:536:-30.1785,0,-69.9369	0/1:42:27,15:27:972:15:536:-34.1886,0,-62.9509	0/1:1156:849,307:849:30297:307:10917:-584.469,0,-1824.89	0/1:490:387,103:387:13793:103:3641:-172.016,0,-939.306	0/1:427:326,101:326:11559:101:3575:-183.554,0,-782.409	0/1:30:17,13:17:599:13:468:-31.0733,0,-28.4106	0/1:871:556,315:556:19832:315:11244:-741.683,0,-1307.35	0/1:193:114,79:114:4052:79:2830:-194.263,0,-248.225	0/1:651:376,275:376:13398:275:9780:-646.585,0,-854.319	0/1:405:245,160:245:8683:160:5681:-367.567,0,-568.918	0/1:328:229,99:229:8105:99:3519:-202.517,0,-541.07	0/1:339:246,92:246:8717:92:3253:-176.624,0,-468.636	0/1:491:295,196:295:10523:196:6945:-410.319,0,-696.595	0/1:643:427,216:427:15213:216:7679:-494.023,0,-971.166	0/1:372:299,73:299:10701:73:2577:-116.794,0,-728.361	0/1:720:520,200:520:18533:200:7121:-381.288,0,-1244.27	0/1:960:724,236:724:25834:236:8435:-432.923,0,-1586.16	0/1:56:35,21:35:1260:21:749:-47.7627,0,-79.2105	0/1:739:507,232:507:18061:232:8305:-503.449,0,-1213.66	0/1:171:126,45:126:4466:45:1611:-91.842,0,-247.005	0/1:45:32,13:32:1148:13:468:-23.6537,0,-78.8431	0/1:678:394,284:394:14038:284:10084:-655.884,0,-887.362	0/1:102:74,28:74:2646:28:995:-57.864,0,-169.044	0/1:20:7,13:7:252:13:464:-35.819,0,-13.7694	0/1:127:77,50:77:2760:50:1752:-112.68,0,-168.086	0/1:278:176,102:176:6283:102:3632:-223.313,0,-402.168	0/1:461:315,146:315:11249:146:5224:-328.841,0,-723.88	0/1:36:16,20:16:572:20:698:-48.3229,0,-34.5509	0/1:839:631,208:631:22460:208:7408:-410.484,0,-1330.7	0/1:816:510,306:510:18140:306:10904:-729.092,0,-1141.12	0/1:382:265,117:265:9407:117:4149:-255.223,0,-612.434	0/1:378:241,137:241:8559:137:4889:-324.711,0,-535.369	0/1:500:345,155:345:12277:155:5516:-338.794,0,-816.902	0/1:486:285,201:285:10153:201:7163:-496.287,0,-629.872	0/1:203:148,55:148:5304:55:1976:-113.655,0,-343.084	0/1:405:285,120:285:10167:120:4277:-256.832,0,-675.73	0/1:475:353,122:353:12641:122:4358:-248.136,0,-753.782	0/1:115:69,46:69:2452:46:1648:-108.209,0,-156.635	0/1:374:277,97:277:9889:97:3447:-188.624,0,-660.693	0/1:324:223,101:223:7947:101:3594:-193.333,0,-543.666	0/1:906:587,319:587:20882:319:11296:-683.889,0,-1348.56	0/1:625:470,155:470:16778:155:5542:-303.755,0,-1147.23	0/1:321:182,139:182:6491:139:4950:-337.419,0,-405.112	0/1:495:366,129:366:12998:129:4585:-252.115,0,-880.519	0/1:15:4,11:4:144:11:392:-29.7016,0,-7.02269	0/1:541:405,136:405:14413:136:4843:-262.684,0,-985.378	0/1:378:286,92:286:10149:92:3264:-173.263,0,-687.084	0/1:1040:817,222:817:29145:222:7891:-387.641,0,-1978.02	0/1:335:236,99:236:8414:99:3530:-212.542,0,-543.068	0/1:237:154,83:154:5491:83:2957:-193.797,0,-354.736	0/1:311:227,84:227:8079:84:2972:-160.13,0,-556.771	0/1:494:317,177:317:11264:177:6341:-418.331,0,-725.951	0/1:153:95,58:95:3403:58:2056:-120.293,0,-224.329	0/1:299:211,87:211:7453:87:3110:-180.785,0,-499.143	0/1:278:209,69:209:7471:69:2454:-128.753,0,-509.834	0/1:300:234,66:234:8382:66:2363:-118.711,0,-571.377	0/1:586:342,244:342:12178:244:8637:-560.295,0,-756.366	0/1:308:149,159:149:5345:159:5665:-399.6,0,-316.674	0/1:303:248,55:248:8844:55:1964:-82.8969,0,-628.478	0/1:443:323,120:323:11497:120:4253:-243.692,0,-775.648
chr07	16870332	.	TC	TT	26411.3	PASS	AB=0.197481;ABP=30743.8;AC=88;AF=0.468085;AN=188;AO=7725;CIGAR=1M1X;DP=39937;DPB=39938.5;DPRA=0;EPP=16777.6;EPPR=59264;GTI=41;LEN=1;MEANALT=1.89362;MQM=35.539;MQMR=38.9477;NS=94;NUMALT=1;ODDS=0.946883;PAIRED=0;PAIREDR=0;PAO=1.5;PQA=52;PQR=0;PRO=0;QA=270994;QR=1094353;RO=32070;RPL=0;RPP=16777.6;RPPR=63919.2;RPR=7725;RUN=1;SAF=0;SAP=16777.6;SAR=7725;SRF=1916;SRP=53994.2;SRR=30154;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:133:112,21:112:3778:21:752:-23.0279,0,-269.58	0/1:718:572,144:572:19559:144:5024:-204.975,0,-1393.95	0/1:599:486,113:486:16536:113:3988:-155.364,0,-1160.51	0/1:860:702,158:702:23912:158:5531:-180.146,0,-1693.74	0/0:282:275,7:275:9563:7:237:0,-64.9197,-790.38	0/0:280:258,20:258:8863:20:701:0,-25.3617,-654.999	0/1:567:401,163:401:13719:163:5720:-282.376,0,-985.921	0/1:799:622,175:622:20864:175:6038:-267.617,0,-1423.2	0/1:272:221,50:221:7464:50:1743:-63.0865,0,-514.734	0/1:516:421,92:421:14397:92:3210:-109.86,0,-1019.3	0/1:473:376,97:376:12843:97:3270:-129.79,0,-908.091	0/1:295:240,55:240:8210:55:1930:-68.9448,0,-593.742	0/1:289:227,60:227:7809:60:2063:-87.0905,0,-536.05	0/1:533:439,93:439:15030:93:3297:-115.423,0,-1070.79	0/1:287:230,56:230:7927:56:1958:-69.5359,0,-578.253	0/1:284:223,61:223:7652:61:2142:-93.1324,0,-543.209	0/1:393:300,91:300:10283:91:3133:-144.706,0,-722.837	0/1:240:195,44:195:6725:44:1557:-55.9109,0,-479.193	0/1:277:218,57:218:7498:57:1974:-79.9733,0,-532.256	0/1:931:739,189:739:25285:189:6656:-268.706,0,-1852.98	0/1:485:366,117:366:12377:117:4097:-195.201,0,-847.328	0/0:290:262,27:262:8864:27:942:0,-8.75807,-582.327	0/1:209:175,34:175:5928:34:1186:-34.3332,0,-430.923	0/1:453:388,65:388:13348:65:2201:-45.6557,0,-986.275	0/1:279:246,32:246:8330:32:1107:-6.31398,0,-594.57	0/1:1301:1011,285:1011:33878:285:9955:-434.367,0,-2201.97	0/1:933:726,206:726:24868:206:7309:-313.014,0,-1786.82	0/1:159:129,30:129:4415:30:1057:-38.7302,0,-332.137	0/1:1381:1146,228:1146:39348:228:7951:-250.552,0,-2503.06	0/1:469:381,86:381:12932:86:3007:-108.897,0,-934.535	0/1:302:221,79:221:7527:79:2791:-139.557,0,-521.344	0/1:14:10,4:10:338:4:144:-6.72376,0,-25.0907	0/1:60:46,14:46:1564:14:474:-19.9174,0,-112.94	0/1:20:11,2:11:376:2:72:-2.13903,0,-27.5309	0/1:42:35,7:35:1185:7:252:-8.47211,0,-81.7278	0/1:41:29,12:29:1004:12:417:-22.5158,0,-69.2728	0/1:1154:953,199:953:32713:199:6962:-234.481,0,-2099.14	0/1:494:381,113:381:12852:113:3996:-172.038,0,-901.617	0/1:421:319,95:319:10944:95:3324:-153.099,0,-768.254	0/0:30:24,1:24:833:1:36:0,-4.44036,-64.4634	0/1:876:715,158:715:24392:158:5582:-188.661,0,-1791.49	0/1:193:156,37:156:5316:37:1320:-48.1133,0,-380.322	0/1:660:582,77:582:19923:77:2710:-24.6947,0,-1444.14	0/1:401:336,64:336:11606:64:2205:-62.646,0,-837.576	0/1:329:266,63:266:8820:63:2176:-78.499,0,-632.982	0/1:338:287,51:287:9730:51:1824:-49.6004,0,-582.255	0/1:493:436,56:436:14811:56:1955:-13.4575,0,-1051.75	0/1:649:501,144:501:17051:144:5062:-209.863,0,-1218.48	0/1:369:260,109:260:8751:109:3851:-194.589,0,-611.411	0/1:721:568,144:568:19298:144:5081:-203.875,0,-1362.63	0/1:957:780,177:780:26720:177:6252:-229.752,0,-1721.45	0/0:57:52,5:52:1781:5:165:0,-3.38444,-131.055	0/1:733:583,148:583:20032:148:5270:-213.799,0,-1437.86	0/1:169:145,23:145:4865:23:805:-16.9774,0,-303.015	0/1:45:26,19:26:887:19:665:-42.0383,0,-56.2723	0/1:684:536,147:536:18225:147:5193:-221.84,0,-1285.86	0/1:102:88,14:88:3013:14:485:-7.76626,0,-208.91	0/1:20:17,3:17:595:3:108:-3.34861,0,-45.8882	0/1:127:101,25:101:3433:25:873:-35.4562,0,-233.425	0/1:283:217,66:217:7303:66:2278:-102.474,0,-502.679	0/1:460:357,103:357:12400:103:3631:-151.158,0,-874.071	0/1:35:31,4:31:1081:4:144:-1.32003,0,-78.1766	0/1:841:730,108:730:24920:108:3807:-61.8955,0,-1629.1	0/1:815:663,151:663:22762:151:5290:-176.528,0,-1635.45	0/1:390:284,106:284:9568:106:3748:-193.856,0,-664.96	0/1:380:315,64:315:10731:64:2266:-66.1302,0,-770.259	0/1:507:407,99:407:13830:99:3498:-127.226,0,-1000.66	0/1:487:384,102:384:13079:102:3600:-140.908,0,-945.906	0/1:204:141,62:141:4820:62:2108:-109.439,0,-329.68	0/1:410:335,75:335:11361:75:2672:-95.4568,0,-810.069	0/1:470:391,79:391:13478:79:2698:-85.4857,0,-866.886	0/1:113:83,30:83:2817:30:1046:-53.2959,0,-200.557	0/1:374:300,73:300:10205:73:2559:-100.93,0,-714.634	0/1:325:250,74:250:8535:74:2626:-122.018,0,-594.124	0/1:904:737,165:737:24913:165:5839:-208.567,0,-1737.85	0/1:624:510,113:510:17594:113:4007:-131.175,0,-1276.11	0/0:326:295,28:295:10014:28:1000:0,-14.4722,-745.38	0/1:484:375,105:375:12732:105:3685:-159.279,0,-907.151	0/1:16:13,3:13:440:3:99:-3.75052,0,-32.8368	0/1:543:405,131:405:13964:131:4647:-216.63,0,-995.543	0/1:375:284,87:284:9643:87:3090:-142.262,0,-683.472	0/1:1044:815,218:815:27889:218:7692:-299.409,0,-1993.96	0/1:329:255,73:255:8791:73:2561:-113.853,0,-610.146	0/1:238:184,53:184:6380:53:1846:-76.4054,0,-461.511	0/1:312:253,59:253:8507:59:2051:-77.0067,0,-610.766	0/1:494:395,99:395:13608:99:3504:-141.507,0,-968.998	0/1:154:124,30:124:4189:30:1061:-42.1366,0,-291.229	0/1:297:234,63:234:7972:63:2233:-94.3426,0,-563.261	0/1:277:223,54:223:7712:54:1932:-76.518,0,-546.424	0/1:297:238,59:238:8228:59:2085:-83.923,0,-580.862	0/1:582:437,139:437:14845:139:4867:-231.242,0,-1028.37	0/1:310:259,50:259:8859:50:1630:-43.761,0,-636.983	0/1:306:243,63:243:8272:63:2237:-85.9379,0,-605.772	0/1:443:352,91:352:12121:91:3171:-119.655,0,-870.806
chr07	16870335	.	T	A	148413	PASS	AB=0.26763;ABP=18564.7;AC=94;AF=0.5;AN=188;AO=10592;CIGAR=1X;DP=39577;DPB=39577;DPRA=0;EPP=23003.2;EPPR=62812.9;GTI=19;LEN=1;MEANALT=1.19149;MQM=48.9913;MQMR=34.2498;NS=94;NUMALT=1;ODDS=4.09485;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=378189;QR=1035172;RO=28965;RPL=1673;RPP=10767;RPPR=61225.9;RPR=8919;RUN=1;SAF=1673;SAP=10767;SAR=8919;SRF=202;SRP=61157.4;SRR=28763;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:133:87,46:87:3115:46:1652:-106.52,0,-199.943	0/1:710:504,206:504:18044:206:7350:-426.553,0,-1218.13	0/1:592:433,159:433:15503:159:5686:-324.389,0,-1030.7	0/1:854:694,159:694:24819:159:5682:-246.79,0,-1689.18	0/1:277:183,94:183:6538:94:3371:-213.874,0,-453.855	0/1:275:207,68:207:7420:68:2435:-128.873,0,-491.361	0/1:565:359,206:359:12810:206:7363:-489.014,0,-821.486	0/1:781:680,101:680:24240:101:3619:-79.7763,0,-1668.69	0/1:268:203,65:203:7275:65:2336:-124.94,0,-475.659	0/1:516:436,80:436:15524:80:2857:-97.8456,0,-1079.52	0/1:471:363,108:363:12901:108:3857:-200.293,0,-874.8	0/1:287:198,89:198:7087:89:3143:-189.849,0,-474.445	0/1:285:218,67:218:7763:67:2365:-123.374,0,-510.883	0/1:521:392,129:392:13992:129:4607:-253.373,0,-950.163	0/1:288:209,79:209:7487:79:2816:-163.58,0,-506.335	0/1:283:225,57:225:8023:57:2039:-94.6112,0,-559.942	0/1:392:293,99:293:10453:99:3534:-189.886,0,-708.726	0/1:246:201,44:201:7195:44:1543:-60.9194,0,-498.643	0/1:275:203,72:203:7225:72:2561:-140.809,0,-490.204	0/1:922:583,339:583:20839:339:12095:-806.392,0,-1375.06	0/1:480:356,124:356:12728:124:4443:-246.918,0,-831.106	0/1:285:173,112:173:6192:112:4024:-275.99,0,-308.099	0/1:205:114,91:114:4087:91:3259:-230.977,0,-250.829	0/1:453:264,188:264:9455:188:6735:-464.315,0,-610.109	0/1:273:198,75:198:7065:75:2673:-152.995,0,-467.972	0/1:1292:1087,205:1087:38831:205:7323:-263.983,0,-2492.17	0/1:927:562,365:562:20105:365:13014:-879.181,0,-1280.72	0/1:164:103,61:103:3678:61:2188:-146.332,0,-248.253	0/1:1371:1103,267:1103:39414:267:9565:-444.614,0,-2383.16	0/1:461:299,162:299:10693:162:5782:-376.992,0,-697.696	0/1:301:215,85:215:7681:85:3032:-178.674,0,-499.323	0/1:15:8,7:8:284:7:248:-17.4615,0,-17.6596	0/1:59:46,13:46:1648:13:444:-21.6376,0,-115.75	0/1:20:18,2:18:648:2:72:-0.718815,0,-37.0975	0/1:44:36,8:36:1288:8:284:-12.0104,0,-85.417	0/1:40:25,15:25:900:15:536:-34.7907,0,-58.0452	0/1:1127:929,198:929:33253:198:7074:-290.835,0,-2073.2	0/1:490:390,100:390:13956:100:3554:-163.029,0,-947.732	0/1:423:323,98:323:11509:98:3479:-175.345,0,-777.649	0/1:29:20,9:20:716:9:320:-20.0906,0,-37.661	0/1:865:546,319:546:19529:319:11398:-754.079,0,-1290.15	0/1:194:115,79:115:4112:79:2831:-194.075,0,-250.732	0/1:646:440,206:440:15700:206:7346:-461.324,0,-1034.76	0/1:401:286,115:286:10172:115:4107:-247.281,0,-682.637	0/1:328:256,71:256:9102:71:2510:-123.646,0,-617.778	0/1:332:269,62:269:9619:62:2192:-94.2554,0,-546.813	0/1:485:381,103:381:13632:103:3685:-172.827,0,-925.496	0/1:644:426,218:426:15167:218:7764:-501.814,0,-966.658	0/1:366:293,73:293:10465:73:2624:-121.695,0,-710.694	0/1:720:624,96:624:22330:96:3424:-87.4722,0,-1541.78	0/1:936:774,162:774:27739:162:5780:-233.726,0,-1743.4	0/1:56:42,14:42:1504:14:504:-28.6585,0,-99.2135	0/1:733:498,235:498:17811:235:8424:-515.542,0,-1195.3	0/1:168:123,45:123:4393:45:1616:-92.9096,0,-240.531	0/1:45:39,6:39:1396:6:212:-5.60439,0,-96.532	0/1:677:476,201:476:17042:201:7168:-436.942,0,-1112.15	0/1:99:74,25:74:2660:25:900:-50.6024,0,-170.959	0/1:19:7,12:7:252:12:432:-33.2527,0,-14.0704	0/1:122:87,35:87:3082:35:1238:-74.0513,0,-197.233	0/1:279:208,71:208:7414:71:2526:-138.654,0,-486.665	0/1:456:309,146:309:11034:146:5228:-330.714,0,-708.651	0/1:35:25,10:25:900:10:356:-21.7676,0,-60.0381	0/1:835:625,209:625:22342:209:7429:-415.308,0,-1329.3	0/1:809:506,303:506:18128:303:10854:-725.733,0,-1139.34	0/1:383:261,122:261:9322:122:4361:-273.12,0,-605.037	0/1:371:236,134:236:8445:134:4792:-317.828,0,-529.685	0/1:499:340,159:340:12161:159:5690:-354.797,0,-806.054	0/1:480:277,203:277:9888:203:7247:-504.765,0,-611.603	0/1:202:147,55:147:5260:55:1972:-113.609,0,-339.93	0/1:402:282,120:282:10082:120:4298:-259.977,0,-668.445	0/1:467:347,119:347:12418:119:4255:-241.489,0,-741.183	0/1:114:84,30:84:3012:30:1080:-62.6686,0,-201.126	0/1:369:269,100:269:9629:100:3571:-201.02,0,-644.476	0/1:326:264,62:264:9403:62:2208:-94.4774,0,-647.062	0/1:908:683,225:683:24414:225:7986:-430.895,0,-1610.97	0/1:616:463,153:463:16579:153:5473:-299.361,0,-1131.27	0/1:323:182,141:182:6515:141:5001:-342.193,0,-406.725	0/1:490:360,130:360:12888:130:4654:-258.857,0,-873.341	0/1:14:4,10:4:144:10:360:-27.5381,0,-7.02926	0/1:544:409,135:409:14623:135:4827:-260.669,0,-999.953	0/1:374:284,90:284:10144:90:3232:-170.771,0,-687.912	0/1:1031:803,227:803:28748:227:8130:-409.675,0,-1948.31	0/1:334:236,98:236:8446:98:3518:-211.306,0,-545.193	0/1:234:152,82:152:5448:82:2935:-192.71,0,-351.924	0/1:316:262,54:262:9332:54:1940:-77.1257,0,-654.728	0/1:491:317,174:317:11333:174:6177:-405.047,0,-726.37	0/1:153:122,31:122:4321:31:1108:-51.0407,0,-293.045	0/1:298:209,89:2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chr07	16870338	.	TAACTGC	CAACTGC,TAATTGT	235077	PASS	AB=0.475284,0.208069;ABP=214.578,29506.9;AC=92,30;AF=0.489362,0.159574;AN=188;AO=18951,8293;CIGAR=1X6M,3M1X2M1X;DP=39873;DPB=39873;DPRA=0,0;EPP=41154.6,17993.7;EPPR=23570;GTI=8;LEN=1,7;MEANALT=4.78723,4.82796;MQM=31.7232,43.3023;MQMR=48.8725;NS=94;NUMALT=2;ODDS=2.21946;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=593382,294522;QR=379718;RO=10853;RPL=0,2;RPP=41154.6,17993.7;RPPR=10986.1;RPR=18951,8291;RUN=1,1;SAF=0,0;SAP=41154.6,18011;SAR=18951,8293;SRF=1722;SRP=10986.1;SRR=9131;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:138:50,76,11:50:1716:76,11:2393,384:-158.005,0,-114.375,-143.08,-107.282,-277.038	0/1:712:210,315,182:210:7323:315,182:10090,6471:-671.813,0,-481.423,-231.477,-72.7102,-752.955	0/1:596:162,337,95:162:5680:337,95:10654,3386:-724.326,0,-352.748,-509.282,-190.396,-934.894	1/2:863:161,423,261:161:5650:423,261:12738,9304:-1148.86,-291.22,-617.493,-452.47,0,-827.529	0/2:283:96,73,112:96:3380:73,112:2260,3977:-287.362,-154.001,-401.457,0,-107.209,-235.753	1/2:279:70,131,75:70:2458:131,75:3985,2662:-277.404,-14.5658,-168.162,-90.8578,0,-261.333	0/1:563:207,267,85:207:7236:267,85:8414,3016:-543.117,0,-502.713,-365.497,-343.169,-923.023	1/2:799:107,508,178:107:3707:508,178:16065,6326:-1336.07,-201.129,-340.236,-875.11,0,-1113.57	0/1:271:67,165,38:67:2357:165,38:5152,1324:-350.849,0,-137.744,-268.086,-84.4954,-444.073	1/2:512:82,272,147:82:2880:272,147:8554,5249:-782.725,-189.246,-337.886,-387.631,0,-573.913	0/1:477:111,261,102:111:3910:261,102:8230,3628:-563.164,0,-234.832,-306.613,-23.4514,-589.327	0/1:295:91,116,85:91:3167:116,85:3723,3017:-242.131,0,-216.272,-34.8309,-16.5163,-260.454	0/1:286:71,177,35:71:2499:177,35:5570,1253:-381.292,0,-143.419,-305.204,-99.2481,-491.382	1/2:528:129,266,130:129:4489:266,130:8342,4619:-571.172,-5.05723,-287.475,-242.437,0,-565.815	1/2:288:80,117,86:80:2838:117,86:3578,3075:-251.949,-20.4435,-211.231,-29.554,0,-229.701	1/2:285:56,143,84:56:1961:143,84:4512,2991:-390.011,-79.1709,-192.691,-171.112,0,-302.408	0/1:391:103,183,99:103:3606:183,99:5919,3502:-402.142,0,-228.444,-165.61,-16.0073,-419.35	1/2:244:44,109,88:44:1532:109,88:3483,3132:-359.538,-121.472,-210.019,-129.935,0,-224.816	1/2:275:72,125,73:72:2520:125,73:3973,2591:-269.373,-4.09372,-163.343,-90.0598,0,-264.979	0/1:925:345,379,190:345:12065:379,190:11924,6659:-763.02,0,-863.132,-334.187,-444.552,-1254.24	0/1:480:129,301,45:129:4508:301,45:9487,1578:-649.047,0,-266.893,-562.375,-232.004,-906.345	0/1:283:113,63,19:113:3920:63,19:1939,683:-105.642,0,-299.248,-84.3871,-262.95,-396.864	0/1:211:91,99,15:91:3181:99,15:3067,538:-193.318,0,-228.214,-177.475,-214.788,-431.006	0/1:451:188,172,86:188:6598:172,86:5419,3046:-335.107,0,-479.89,-149.98,-289.966,-655.785	0/1:273:76,131,65:76:2643:131,65:4066,2305:-269.64,0,-170.86,-109.39,-27.185,-300.142	1/2:1314:206,624,302:206:7235:624,302:19295,10666:-1612.7,-280.169,-671.696,-815.189,0,-1303.65	0/1:928:363,431,128:363:12749:431,128:13495,4559:-860.44,0,-896.793,-607.843,-664.68,-1595.87	0/1:162:61,59,42:61:2153:59,42:1876,1505:-117.084,0,-156.163,-15.5785,-54.0804,-176.89	0/1:1373:276,650,166:276:9694:650,166:20530,5942:-1406.21,0,-586.804,-1011.05,-304.229,-1743.54	0/1:472:167,237,64:167:5817:237,64:7499,2265:-494.38,0,-397.414,-364.705,-288.822,-814.216	0/1:300:86,164,42:86:3036:164,42:5121,1467:-344.671,0,-194.447,-254.528,-127.796,-485.712	0/1:15:7,7,1:7:241:7,1:220,36:-13.675,0,-16.7979,-12.9059,-16.035,-31.5505	1/2:60:13,25,21:13:462:25,21:784,743:-74.6909,-22.3705,-51.6191,-19.4315,0,-49.9043	0/2:21:11,4,6:11:371:4,6:121,216:-13.5775,-8.12921,-25.3703,0,-9.68229,-16.6781	1/2:44:8,27,9:8:285:27,9:849,312:-60.5595,-1.79376,-16.2596,-38.5614,0,-58.454	0/1:41:14,25,2:14:502:25,2:814,66:-54.8071,0,-32.834,-53.8499,-35.1941,-93.5995	1/2:1146:204,473,226:204:7123:473,226:15108,8054:-1117.89,-78.9438,-507.237,-529.689,0,-1032.33	1/2:493:101,251,136:101:3512:251,136:7758,4842:-631.878,-105.562,-309.46,-277.246,0,-515.781	0/1:422:109,205,104:109:3816:205,104:6520,3700:-442.513,0,-229.585,-187.205,-3.18564,-447.211	0/1:29:14,10,5:14:497:10,5:307,178:-17.7304,0,-26.5856,-7.73455,-15.3882,-35.8789	0/1:871:321,326,217:321:11288:326,217:10225,7703:-638.918,0,-811.452,-123.911,-297.974,-968.204	0/1:194:80,86,25:80:2811:86,25:2651,887:-165.529,0,-200.617,-121.661,-158.57,-340.657	0/1:658:218,290,148:218:7493:290,148:8940,5266:-576.457,0,-514.853,-223.829,-183.918,-781.457	0/1:402:118,192,88:118:4156:192,88:6028,3123:-400.436,0,-278.76,-185.96,-86.5789,-496.048	1/2:325:70,170,83:70:2415:170,83:5322,2952:-407.489,-43.5764,-185.622,-191.749,0,-360.004	0/1:333:64,147,20:64:2254:147,20:4635,716:-316.94,0,-135.702,-278.348,-122.092,-452.254	1/2:498:105,258,133:105:3689:258,133:7938,4708:-617.285,-78.4699,-289.22,-281.988,0,-530.384	0/1:652:223,328,86:223:7822:328,86:10029,3037:-649.27,0,-531.568,-472.707,-386.626,-1077.15	1/2:369:76,204,85:76:2654:204,85:6343,3008:-461.484,-29.6133,-180.105,-242.833,0,-429.165	1/2:718:105,419,191:105:3709:419,191:13291,6768:-1195.37,-262.976,-416.218,-684.621,0,-906.513	1/2:953:168,433,186:168:5885:433,186:13665,6630:-999.361,-58.6515,-402.863,-516.735,0,-935.295	0/1:58:15,32,11:15:537:32,11:965,389:-64.0617,0,-32.7906,-37.35,-11.2156,-76.4869	0/1:734:236,305,187:236:8345:305,187:9852,6613:-642.813,0,-567.883,-198.594,-144.453,-802.016	0/1:170:45,57,18:45:1583:57,18:1732,637:-110.665,0,-110.247,-72.7304,-75.9271,-194.702	0/1:45:6,35,4:6:213:35,4:1133,138:-80.7532,0,-6.55976,-71.7698,-6.31674,-87.6593	0/1:683:202,396,81:202:7066:396,81:12473,2883:-842.915,0,-451.666,-675.773,-342.934,-1222.28	0/1:102:27,48,25:27:951:48,25:1435,894:-93.5334,0,-62.1163,-30.4793,-5.40729,-99.5443	0/1:20:12,5,1:12:416:5,1:154,36:-7.43326,0,-32.2275,-8.12296,-30.8167,-41.5848	0/1:119:34,59,16:34:1172:59,16:1902,573:-128.304,0,-76.9445,-92.1617,-48.3286,-182.039	0/1:276:74,159,40:74:2584:159,40:4982,1413:-338.021,0,-158.063,-248.241,-93.88,-442.143	0/1:457:147,228,75:147:5138:228,75:6986,2685:-454.855,0,-347.195,-283.395,-200.135,-676.677	0/1:36:10,21,5:10:353:21,5:666,180:-45.0276,0,-22.3462,-33.5619,-14.2037,-60.7471	0/1:846:214,247,178:214:7474:247,178:7591,6336:-482.116,0,-532.24,-34.6646,-94.7291,-587.68	0/1:810:309,370,123:309:10806:370,123:11188,4362:-704.373,0,-762.556,-447.473,-524.036,-1284.42	0/1:384:123,201,54:123:4277:201,54:6394,1910:-428.595,0,-284.364,-313.932,-193.191,-642.561	0/1:378:141,175,55:141:4868:175,55:5257,1943:-331.247,0,-341.406,-219.75,-240.16,-597.308	0/1:504:164,207,127:164:5745:207,127:6356,4487:-404.948,0,-398.695,-94.2389,-100.955,-517.046	0/1:490:206,231,49:206:7238:231,49:7094,1735:-445.387,0,-517.09,-368.316,-447.557,-940.223	0/1:200:57,122,20:57:2010:122,20:3833,703:-258.911,0,-124.192,-220.126,-104.982,-375.037	0/1:405:123,177,99:123:4315:177,99:5620,3511:-367.919,0,-292.44,-132.135,-72.9308,-448.073	0/1:473:124,195,67:124:4257:195,67:6040,2387:-399.043,0,-285.969,-243.354,-151.654,-567.844	0/1:116:31,73,12:31:1092:73,12:2382,431:-165.173,0,-66.41,-140.004,-53.8909,-224.794	0/1:373:99,191,81:99:3451:191,81:6020,2872:-406.864,0,-215.282,-213.568,-49.696,-461.981	1/2:327:63,175,83:63:2189:175,83:5574,2940:-442.3,-56.1614,-175.103,-233.471,0,-380.118	0/1:909:230,502,170:230:8044:502,170:15624,6026:-1057.21,0,-486.839,-649.067,-160.584,-1235.87	1/2:625:157,256,195:157:5490:256,195:7807,6980:-628.173,-118.891,-481.656,-116.69,0,-497.844	0/1:328:140,127,58:140:4855:127,58:3909,2082:-237.388,0,-347.327,-120.356,-226.4,-488.483	0/1:496:135,227,128:135:4742:227,128:7310,4550:-488.862,0,-300.822,-174.648,-14.3162,-505.289	0/1:16:11,5,0:11:390:5,0:161,0:-8.61158,0,-29.699,-11.9229,-31.2041,-42.8185	1/2:547:139,239,163:139:4889:239,163:7607,5757:-583.323,-76.6346,-385.559,-167.644,0,-499.467	0/1:375:97,183,92:97:3378:183,92:5852,3248:-393.373,0,-208.196,-169.166,-9.89116,-404.773	1/2:1039:239,479,302:239:8373:479,302:14678,10732:-1181.26,-204.506,-717.322,-391.673,0,-957.795	0/1:329:101,168,53:101:3577:168,53:5240,1879:-348.911,0,-236.08,-229.679,-137.03,-500.393	0/1:240:84,108,42:84:2942:108,42:3313,1498:-211.655,0,-205.748,-116.714,-118.049,-342.356	1/2:311:56,155,97:56:1928:155,97:4924,3426:-461.338,-119.53,-227.489,-204.031,0,-329.464	0/1:491:179,231,79:179:6256:231,79:7185,2813:-466.146,0,-437.056,-294.436,-281.016,-777.277	0/1:155:32,90,31:32:1115:90,31:2813,1097:-194.15,0,-61.6299,-118.56,-3.51148,-197.961	0/1:298:88,141,63:88:3055:141,63:4499,2245:-298.649,0,-198.937,-150.273,-66.529,-372.708	1/2:278:70,129,78:70:2450:129,78:4132,2787:-303.204,-25.649,-178.298,-107.13,0,-275.149	1/2:295:68,134,89:68:2402:134,89:4182,3165:-340.213,-57.4263,-209.246,-111.078,0,-276.461	0/1:581:173,347,57:173:5998:347,57:11033,2037:-750.169,0,-369.355,-642.228,-313.799,-1098.9	0/1:309:116,161,29:116:4057:161,29:5136,1033:-338.786,0,-280.936,-290.755,-246.459,-611.444	1/2:301:55,112,131:55:1946:112,131:3501,4683:-451.898,-216.968,-339.146,-95.56,0,-212.039	1/2:443:122,194,123:122:4258:194,123:5946,4361:-395.844,-7.6044,-289.669,-84.4764,0,-387.941
chr07	16870349	.	AGACTATGCA	AGATTATGCA	66605.5	PASS	AB=0.217704;ABP=25604.3;AC=84;AF=0.446809;AN=188;AO=8169;CIGAR=3M1X6M;DP=38424;DPB=40696.1;DPRA=25.8118;EPP=17741.8;EPPR=61368.8;GTI=29;LEN=1;MEANALT=3.8172;MQM=43.3172;MQMR=36.2788;NS=94;NUMALT=1;ODDS=1.06238;PAIRED=0;PAIREDR=0;PAO=0.25;PQA=6.25;PQR=21909.7;PRO=627.75;QA=291637;QR=1014187;RO=28734;RPL=8169;RPP=17741.8;RPPR=61368.8;RPR=0;RUN=1;SAF=0;SAP=17741.8;SAR=8169;SRF=0;SRP=62398.1;SRR=28734;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:139:128,11:128:4456:11:377:0,-8.8719,-329.491	0/1:716:531,177:531:18735:177:6353:-335.171,0,-1297.67	0/1:601:507,93:507:17892:93:3344:-108.11,0,-1254.04	0/1:863:598,257:598:21079:257:9142:-552.374,0,-1369.72	0/1:283:168,114:168:5926:114:4060:-272.155,0,-403.484	0/1:282:208,74:208:7352:74:2619:-141.462,0,-486.686	0/1:483:397,82:397:14038:82:2927:-113.559,0,-961.28	0/1:811:630,179:630:22084:179:6382:-307.207,0,-1484.2	0/1:273:237,36:237:8341:36:1266:-27.3392,0,-573.781	0/1:520:372,147:372:13122:147:5236:-307.111,0,-873.295	0/1:486:385,99:385:13634:99:3544:-168.27,0,-934.369	0/1:297:210,83:210:7425:83:2976:-168.839,0,-510.566	0/1:290:253,36:253:8975:36:1292:-24.2634,0,-618.834	0/1:514:380,128:380:13379:128:4596:-251.251,0,-910.889	0/1:286:197,86:197:6995:86:3072:-186.917,0,-471.692	0/1:288:201,83:201:7078:83:2944:-173.274,0,-478.634	0/1:396:296,92:296:10497:92:3249:-163.307,0,-727.844	0/1:244:158,85:158:5632:85:3036:-188.764,0,-368.74	0/1:276:203,71:203:7165:71:2525:-135.63,0,-488.943	0/1:802:610,185:610:21587:185:6600:-344.552,0,-1489.81	0/0:489:442,44:442:15550:44:1584:0,-6.95086,-1094.7	0/1:209:114,18:114:4007:18:648:-18.1572,0,-282.383	0/0:162:146,15:146:5132:15:525:0,-4.33188,-360.854	0/1:383:298,83:298:10516:83:2979:-145.409,0,-731.995	0/1:282:216,66:216:7574:66:2340:-121.056,0,-513.433	0/1:1306:849,297:849:29907:297:10591:-599.245,0,-1983.48	0/1:838:705,126:705:24895:126:4529:-146.964,0,-1746.27	0/1:144:102,42:102:3600:42:1512:-89.0584,0,-249.919	0/1:1253:838,165:838:29597:165:5888:-222.81,0,-2008.27	0/1:446:381,64:381:13384:64:2284:-65.0699,0,-946.588	0/1:305:260,40:260:9209:40:1394:-32.8057,0,-639.283	0/0:15:14,1:14:489:1:36:0,-0.994441,-36.8356	0/1:57:36,21:36:1282:21:756:-49.5798,0,-85.443	0/1:20:14,6:14:484:6:216:-12.9791,0,-24.1486	0/1:46:36,9:36:1273:9:324:-14.53,0,-85.7223	0/0:42:39,3:39:1389:3:96:0,-4.23503,-104.911	0/1:1146:694,223:694:24570:223:7994:-436.866,0,-1680.89	0/1:495:352,132:352:12351:132:4710:-268.846,0,-818.888	0/1:431:325,105:325:11517:105:3751:-194.079,0,-781.613	0/1:27:19,5:19:666:5:180:-8.58933,0,-35.2119	0/1:766:547,214:547:19289:214:7648:-442.109,0,-1309.44	0/1:185:158,23:158:5610:23:817:-17.1355,0,-396.32	0/1:582:434,145:434:15249:145:5189:-280.712,0,-1018.12	0/1:377:289,86:289:10227:86:3066:-158.053,0,-702.559	0/1:330:248,82:248:8702:82:2952:-162.389,0,-588.575	0/0:319:213,20:213:7533:20:720:0,-5.93445,-535.705	0/1:498:365,131:365:12860:131:4686:-255.433,0,-858.53	0/1:534:447,86:447:15695:86:3088:-106.646,0,-1046.86	0/1:375:287,86:287:10149:86:3069:-160.02,0,-681.622	0/1:725:537,186:537:18981:186:6619:-368.805,0,-1253.7	0/1:941:610,183:610:21573:183:6552:-345.196,0,-1465.43	0/1:53:42,11:42:1490:11:396:-19.3135,0,-99.2945	0/1:741:552,182:552:19604:182:6529:-342.803,0,-1364.69	0/1:163:103,17:103:3639:17:608:-18.1994,0,-257.148	0/0:46:41,4:41:1436:4:144:0,-1.09775,-102.019	0/1:620:535,80:535:18883:80:2854:-64.6204,0,-1308.3	0/1:107:79,26:79:2789:26:909:-48.5954,0,-182.213	0/0:15:13,1:13:459:1:36:0,-1.13158,-34.6634	0/1:119:94,16:94:3284:16:572:-18.0678,0,-230.057	0/1:285:242,39:242:8545:39:1397:-38.1617,0,-589.507	0/1:434:353,75:353:12566:75:2681:-108.854,0,-853.66	0/1:33:28,5:28:986:5:180:-6.30471,0,-69.3593	0/1:750:387,179:387:13635:179:6345:-394.959,0,-909.572	0/1:700:563,122:563:19888:122:4330:-176.884,0,-1354.02	0/1:364:308,54:308:10848:54:1936:-60.4519,0,-752.159	0/1:322:267,51:267:9400:51:1793:-62.2117,0,-637.566	0/1:505:374,124:374:13249:124:4441:-243.967,0,-912.021	0/1:428:378,49:378:13298:49:1760:-23.9095,0,-930.551	0/0:195:174,18:174:6161:18:648:0,-0.943962,-425.805	0/1:409:306,96:306:10817:96:3429:-174.985,0,-748.301	0/1:440:293,67:293:10382:67:2397:-105.671,0,-706.418	0/1:111:97,12:97:3433:12:424:-4.62414,0,-241.311	0/1:379:296,80:296:10463:80:2850:-132.682,0,-720.475	0/1:325:242,81:242:8476:81:2889:-152.034,0,-576.63	0/1:922:748,164:748:26268:164:5851:-239.226,0,-1796.43	0/1:616:420,191:420:14841:191:6851:-423.443,0,-987.507	0/1:329:271,54:271:9550:54:1887:-65.181,0,-678.656	0/1:496:369,126:369:13007:126:4524:-241.824,0,-892.029	0/0:16:16,0:16:551:0:0:0,-4.81648,-47.1251	0/1:547:380,163:380:13484:163:5801:-346.277,0,-908.268	0/1:380:286,93:286:10073:93:3322:-172.255,0,-689.604	0/1:1044:737,300:737:26057:300:10702:-636.332,0,-1717.52	0/1:336:280,53:280:9938:53:1890:-66.8071,0,-684.289	0/1:214:170,42:170:6021:42:1487:-67.2423,0,-411.697	0/1:319:220,97:220:7745:97:3458:-210.818,0,-518.236	0/1:453:372,77:372:13149:77:2772:-110.149,0,-908.913	0/1:157:126,30:126:4447:30:1080:-46.3837,0,-303.886	0/1:303:2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chr07	16870370	.	C	T	0	PASS	AB=0.142247;ABP=13796.8;AC=33;AF=0.175532;AN=188;AO=2115;CIGAR=1X;DP=37742;DPB=37742;DPRA=0.880335;EPP=4595.67;EPPR=77329.1;GTI=22;LEN=1;MEANALT=1.15094;MQM=31.9002;MQMR=37.509;NS=94;NUMALT=1;ODDS=676.211;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75716;QR=1271038;RO=35610;RPL=2115;RPP=4595.67;RPPR=77329.1;RPR=0;RUN=1;SAF=0;SAP=4595.67;SAR=2115;SRF=0;SRP=77329.1;SRR=35610;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:134:111,23:111:3941:23:824:-20.1432,0,-287.137	0/0:710:710,0:710:25376:0:0:0,-213.731,-2072.56	0/1:592:497,94:497:17734:94:3360:-68.7829,0,-1278.53	0/0:849:849,0:849:30270:0:0:0,-255.574,-2432.74	0/1:280:240,40:240:8529:40:1440:-25.9682,0,-645.559	0/1:278:239,39:239:8477:39:1396:-18.2034,0,-603.059	0/0:474:472,0:472:16870:0:0:0,-142.086,-1352.43	0/1:787:645,142:645:22984:142:5073:-132.593,0,-1622.36	0/1:264:224,40:224:7978:40:1436:-25.1974,0,-561.477	0/1:506:442,64:442:15786:64:2304:-28.0311,0,-1131.58	0/0:478:431,47:431:15354:47:1688:0,-11.0266,-1112.25	0/0:289:287,2:287:10236:2:68:0,-81.0686,-832.717	0/1:283:243,40:243:8670:40:1436:-18.8283,0,-613.593	0/1:500:439,61:439:15690:61:2188:-15.5645,0,-1140.02	0/0:282:282,0:282:10119:0:0:0,-84.8905,-829.094	0/0:286:266,20:266:9455:20:705:0,-31.5776,-721.957	0/0:390:390,0:390:13967:0:0:0,-117.402,-1133.93	0/0:245:245,0:245:8772:0:0:0,-73.7523,-708.326	0/0:271:271,0:271:9701:0:0:0,-81.5791,-787.402	0/0:791:791,0:791:28250:0:0:0,-238.115,-2312.79	0/1:475:411,64:411:14659:64:2300:-29.7718,0,-1037.01	0/0:213:212,1:212:7550:1:36:0,-61.8405,-523.04	0/0:156:141,15:141:5026:15:521:0,-6.87758,-361.768	0/1:381:334,47:334:11867:47:1684:-11.9911,0,-871.395	0/1:273:226,47:226:8056:47:1669:-43.2645,0,-576.474	0/0:1292:1291,0:1291:46116:0:0:0,-388.63,-3529.62	0/0:824:822,0:822:29306:0:0:0,-247.447,-2377.41	0/0:141:141,0:141:5060:0:0:0,-42.4452,-420.839	0/1:1260:1103,155:1103:39357:155:5552:-60.6779,0,-2469.18	0/1:439:372,67:372:13268:67:2378:-47.8036,0,-961.736	0/0:298:297,1:297:10610:1:36:0,-86.5193,-846.264	0/0:15:14,1:14:504:1:36:0,-1.46091,-38.4276	0/0:58:58,0:58:2088:0:0:0,-17.4597,-171.651	0/0:19:17,2:17:608:2:72:0,-0.797021,-37.5364	0/1:46:39,7:39:1381:7:248:-4.62513,0,-96.8184	0/0:42:42,0:42:1490:0:0:0,-12.6433,-121.256	0/0:1135:1027,108:1027:36780:108:3880:0,-37.3116,-2453.92	0/0:481:481,0:481:17203:0:0:0,-144.795,-1381.27	0/0:418:418,0:418:14957:0:0:0,-125.831,-1204.19	0/1:27:23,4:23:828:4:144:-3.17398,0,-49.0166	0/0:754:752,1:752:26895:1:32:0,-223.803,-2196	0/0:181:181,0:181:6457:0:0:0,-54.4864,-519.153	0/1:570:497,73:497:17740:73:2624:-28.7764,0,-1268.62	0/1:376:331,45:331:11753:45:1616:-11.4533,0,-850.447	0/0:324:291,33:291:10393:33:1184:0,-4.67528,-750.72	0/0:327:297,30:297:10604:30:1076:0,-12.353,-658.856	0/1:489:394,95:394:14044:95:3386:-99.4728,0,-1001.97	0/0:514:513,0:513:18259:0:0:0,-154.428,-1438.05	0/0:368:368,0:368:13136:0:0:0,-110.779,-1057.65	0/1:718:607,111:607:21623:111:3969:-97.6447,0,-1522.1	0/0:940:859,80:859:30733:80:2868:0,-57.9772,-2094.67	0/1:51:45,6:45:1605:6:216:-2.1794,0,-113.02	0/0:731:731,0:731:26174:0:0:0,-220.053,-2146.79	0/0:169:169,0:169:6041:0:0:0,-50.8741,-437.644	0/1:44:36,8:36:1288:8:288:-7.37555,0,-92.1493	0/1:610:514,94:514:18406:94:3357:-71.3126,0,-1295.1	0/0:99:98,1:98:3501:1:36:0,-26.6143,-274.57	0/0:15:15,0:15:540:0:0:0,-4.51545,-45.4536	0/1:118:102,15:102:3641:15:540:-6.43731,0,-250.28	0/1:281:248,33:248:8846:33:1188:-4.83721,0,-626.701	0/0:429:427,1:427:15295:1:36:0,-126.504,-1220.1	0/1:34:24,10:24:845:10:360:-18.0583,0,-59.5779	0/0:746:746,0:746:26609:0:0:0,-224.568,-1957.15	0/0:679:679,0:679:24249:0:0:0,-204.399,-1937.7	0/0:354:354,0:354:12581:0:0:0,-106.565,-1012.17	0/0:315:315,0:315:11213:0:0:0,-94.8244,-888.486	0/0:489:489,0:489:17420:0:0:0,-147.204,-1429.11	0/0:416:416,0:416:14808:0:0:0,-125.228,-1193.64	0/0:193:193,0:193:6885:0:0:0,-58.0988,-544.201	0/0:396:395,0:395:14067:0:0:0,-118.907,-1148.08	0/0:432:430,2:430:15414:2:72:0,-123.268,-1141.26	0/1:105:89,16:89:3180:16:576:-14.6124,0,-225.732	0/0:369:369,0:369:13182:0:0:0,-111.08,-1064.14	0/1:318:279,39:279:9912:39:1404:-3.34308,0,-719.932	0/1:900:799,101:799:28441:101:3594:-0.502451,0,-2022.14	0/0:608:608,0:608:21687:0:0:0,-183.026,-1769.33	0/0:321:321,0:321:11433:0:0:0,-96.6306,-934.338	0/0:487:485,1:485:17375:1:36:0,-143.717,-1410.99	0/0:15:14,1:14:500:1:36:0,-1.77925,-40.0102	0/0:543:541,2:541:19296:2:72:0,-157.656,-1572.38	0/0:367:367,0:367:13035:0:0:0,-110.478,-1059.58	0/0:1025:1025,0:1025:36589:0:0:0,-308.556,-2957.33	0/0:330:330,0:330:11809:0:0:0,-99.3399,-945.412	0/0:207:207,0:207:7436:0:0:0,-62.3132,-601.968	0/1:313:279,34:279:9979:34:1224:-2.1346,0,-724.892	0/0:442:441,1:441:15734:1:36:0,-130.001,-1272.04	0/1:149:123,26:123:4383:26:928:-23.1535,0,-312.112	0/0:291:291,0:291:10423:0:0:0,-87.5997,-842.603	0/0:277:277,0:277:9909:0:0:0,-83.3853,-801.892	0/0:293:293,0:293:10451:0:0:0,-88.2018,-848.651	0/1:552:474,78:474:16901:78:2796:-47.566,0,-1185.19	0/1:255:208,47:208:7385:47:1692:-58.4108,0,-520.531	0/0:297:297,0:297:10566:0:0:0,-89.4059,-87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chr07	16870710	.	GCTCTTC	GCTCCTC	97362.1	PASS	AB=0.659559;ABP=1807.47;AC=95;AF=0.505319;AN=188;AO=5386;CIGAR=4M1X2M;DP=8164;DPB=8164.71;DPRA=0;EPP=11698.6;EPPR=5679.24;GTI=1;LEN=1;MEANALT=2.21277;MQM=58.871;MQMR=58.5773;NS=94;NUMALT=1;ODDS=79.6421;PAIRED=0;PAIREDR=0;PAO=1.16667;PQA=42;PQR=24;PRO=0.666667;QA=192366;QR=91733;RO=2614;RPL=0;RPP=11698.6;RPPR=5679.24;RPR=5386;RUN=1;SAF=5386;SAP=11698.6;SAR=0;SRF=2614;SRP=5679.24;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:60:19,41:19:665:41:1468:-114.253,0,-42.0849	0/1:57:13,42:13:444:42:1487:-117.106,0,-23.3677	0/1:238:77,156:77:2717:156:5576:-431.34,0,-174.25	0/1:214:52,161:52:1822:161:5755:-453.453,0,-99.7039	0/1:63:19,38:19:677:38:1359:-105.066,0,-43.6323	0/1:23:8,15:8:269:15:532:-41.2894,0,-17.6134	0/1:97:49,48:49:1721:48:1722:-125.795,0,-120.823	0/1:83:9,73:9:301:73:2615:-210.64,0,-2.48142	0/1:92:22,70:22:755:70:2495:-196.963,0,-40.486	0/1:55:13,42:13:448:42:1479:-116.684,0,-24.0922	0/1:34:7,25:7:246:25:900:-71.3183,0,-12.4922	0/1:100:44,54:44:1526:54:1940:-145.021,0,-105.765	0/1:37:19,15:19:671:15:540:-38.2558,0,-50.1684	0/1:25:4,19:4:140:19:684:-54.6061,0,-5.66593	0/1:55:23,30:23:813:30:1072:-80.4782,0,-57.0995	0/1:31:9,21:9:319:21:756:-58.9767,0,-19.6648	0/1:29:7,21:7:252:21:747:-58.7633,0,-14.2405	0/1:21:8,10:8:287:10:360:-26.9992,0,-20.43	0/1:26:11,14:11:390:14:504:-37.8126,0,-27.5246	0/1:148:37,109:37:1305:109:3920:-308.353,0,-73.1091	0/1:155:46,108:46:1597:108:3860:-300.805,0,-97.2894	0/1:154:50,100:50:1746:100:3564:-275.132,0,-111.075	0/1:93:18,68:18:615:68:2428:-192.507,0,-29.3446	0/1:71:15,56:15:528:56:2012:-159.951,0,-26.4726	0/1:71:17,51:17:595:51:1832:-144.347,0,-33.0708	0/1:238:82,149:82:2900:149:5336:-409.912,0,-190.179	0/1:219:92,122:92:3254:122:4356:-327.456,0,-228.194	0/1:27:13,11:13:456:11:396:-28.3999,0,-33.7922	0/1:223:49,170:49:1715:170:6083:-480.543,0,-88.3129	0/1:96:29,67:29:1007:67:2371:-184.657,0,-61.9743	0/1:88:14,70:14:491:70:2508:-200.262,0,-18.8532	0/1:28:8,20:8:279:20:708:-55.6168,0,-16.9545	0/1:65:25,40:25:873:40:1420:-108.459,0,-59.2318	0/1:10:1,7:1:35:7:252:-20.2526,0,-0.738254	0/1:25:7,18:7:239:18:648:-51.1123,0,-14.3135	0/1:43:14,29:14:489:29:1036:-80.6096,0,-31.2996	0/1:173:65,107:65:2305:107:3827:-292.303,0,-155.248	0/1:151:51,98:51:1793:98:3504:-270.11,0,-116.432	0/1:37:8,27:8:286:27:968:-76.4871,0,-15.1635	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:119:43,75:43:1536:75:2680:-205.518,0,-102.638	0/1:53:19,34:19:670:34:1212:-93.4317,0,-44.6694	0/1:165:44,116:44:1527:116:4144:-324.531,0,-88.2487	0/1:42:14,26:14:485:26:936:-72.1658,0,-31.5958	0/1:43:11,31:11:384:31:1104:-86.5004,0,-21.8936	0/1:101:44,55:44:1557:55:1972:-147.56,0,-110.2	0/1:85:18,64:18:633:64:2296:-181.791,0,-32.261	0/1:180:74,106:74:2617:106:3775:-285.594,0,-181.363	0/1:103:41,60:41:1470:60:2139:-162.007,0,-101.835	0/1:87:17,70:17:602:70:2516:-200.409,0,-28.2982	0/1:175:76,99:76:2694:99:3539:-265.731,0,-189.055	0/1:13:4,8:4:140:8:288:-22.3628,0,-9.03949	0/1:136:46,87:46:1635:87:3119:-240.5,0,-107.014	0/1:27:11,16:11:393:16:576:-43.9192,0,-27.4976	0/1:9:1,8:1:36:8:288:-23.5581,0,-0.889005	0/1:120:13,106:13:456:106:3792:-305.067,0,-5.19123	0/1:64:24,39:24:840:39:1391:-106.09,0,-56.6233	0/1:22:4,17:4:135:17:594:-47.0841,0,-5.80269	0/1:28:8,19:8:279:19:684:-53.3855,0,-16.9606	0/1:56:16,38:16:573:38:1368:-106.842,0,-35.2979	0/1:97:43,51:43:1500:51:1828:-135.89,0,-106.644	0/1:9:1,8:1:36:8:288:-23.5541,0,-0.889005	0/1:178:51,123:51:1811:123:4413:-344.162,0,-110.463	0/1:158:50,106:50:1747:106:3791:-294.137,0,-110.083	0/1:48:6,41:6:216:41:1451:-116.306,0,-5.28286	0/1:111:37,72:37:1298:72:2576:-198.832,0,-83.9087	0/1:179:52,125:52:1828:125:4470:-348.467,0,-110.845	0/1:144:48,94:48:1665:94:3345:-258.148,0,-107.014	0/1:34:13,21:13:454:21:756:-58.0963,0,-30.9213	0/1:92:35,57:35:1223:57:2035:-155.713,0,-82.6767	0/1:59:24,24:24:819:24:864:-63.0784,0,-59.192	0/1:30:6,24:6:208:24:848:-67.5789,0,-10.0283	0/1:176:37,137:37:1291:137:4896:-387.949,0,-63.7153	0/1:76:9,67:9:322:67:2376:-191.202,0,-6.44593	0/1:110:27,83:27:951:83:2956:-232.966,0,-52.597	0/1:132:32,99:32:1130:99:3536:-278.615,0,-62.1366	0/1:156:72,78:72:2478:78:2780:-204.911,0,-177.757	0/1:79:20,59:20:703:59:2104:-165.82,0,-39.8119	0/1:22:4,17:4:138:17:603:-48.0678,0,-6.20963	0/1:84:31,53:31:1104:53:1874:-143.651,0,-74.3842	0/1:123:48,74:48:1675:74:2636:-200.377,0,-113.809	0/1:249:105,139:105:3689:139:4936:-370.14,0,-258.313	0/1:43:11,27:11:387:27:961:-74.9288,0,-23.3796	0/1:42:19,21:19:662:21:729:-53.531,0,-47.5049	0/1:14:6,8:6:200:8:288:-22.0493,0,-14.1121	0/1:88:22,66:22:764:66:2354:-185.57,0,-42.398	0/1:22:7,13:7:235:13:460:-35.3558,0,-15.1038	0/1:58:31,24:31:1100:24:852:-60.0928,0,-82.3582	0/1:72:33,39:33:1169:39:1378:-102.598,0,-83.7569	0/1:22:7,15:7:240:15:531:-41.4972,0,-15.3112	0/1:99:26,73:26:878:73:2620:-206.233,0,-49.5012	0/1:45:14,31:14:485:31:1074:-83.4013,0,-29.8413	0/1:126:51,71:51:1773:71:2540:-191.702,0,-122.668	0/1:100:54,46:54:1921:46:1640:-117.718,0,-143.019
chr07	16870732	.	T	A,C	169406	PASS	AB=0.680345,0.318916;ABP=2295.52,2314.36;AC=96,92;AF=0.510638,0.489362;AN=188;AO=5600,2595;CIGAR=1X,1X;DP=8201;DPB=8201;DPRA=0,22.0349;EPP=11285.1,5187.03;EPPR=3.0103;GTI=10;LEN=1,1;MEANALT=2.03191,2.04301;MQM=58.6084,58.506;MQMR=60;NS=94;NUMALT=2;ODDS=8098.27;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=200780,92483;QR=72;RO=2;RPL=103,53;RPP=11285.1,5187.03;RPPR=3.0103;RPR=5497,2542;RUN=1,1;SAF=5600,2595;SAP=12163.3,5637.98;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:59:0,40,19:0:0:40,19:1436,684:-173.178,-56.1423,-44.1011,-117.395,0,-111.675	1/2:59:0,46,13:0:0:46,13:1652,462:-172.32,-37.997,-24.1496,-134.679,0,-130.765	1/2:239:0,162,77:0:0:162,77:5828,2726:-697.591,-222.399,-173.633,-475.547,0,-452.367	1/2:213:1,161,51:1:36:161,51:5784,1825:-616.935,-145.719,-100.191,-468.578,0,-456.162	1/2:63:0,44,19:0:0:44,19:1584,684:-185.245,-56.0549,-42.8095,-129.55,0,-123.83	1/2:23:0,15,8:0:0:15,8:532,280:-66.4772,-23.1311,-18.6156,-43.6976,0,-41.2894	1/2:97:0,50,47:0:0:50,47:1796,1676:-278.36,-132.211,-117.16,-146.5,0,-132.352	1/1:82:0,75,7:0:0:75,7:2691,248:-242.019,-22.5773,0,-221.817,-2.02027,-219.71	1/2:95:0,74,21:0:0:74,21:2660,748:-278.006,-61.2952,-39.019,-217.067,0,-210.745	1/2:56:0,43,13:0:0:43,13:1548,464:-164.33,-38.1841,-25.2398,-126.504,0,-122.59	1/2:36:0,29,7:0:0:29,7:1044,252:-106.068,-20.9217,-12.1919,-85.5061,0,-83.3989	1/2:99:0,56,43:0:0:56,43:2016,1513:-286.293,-121.804,-104.946,-164.841,0,-151.897	1/2:37:0,18,19:0:0:18,19:648,684:-108.284,-56.1708,-50.7522,-52.471,0,-46.7514	1/2:25:0,21,4:0:0:21,4:756,144:-73.7504,-12.1095,-5.78787,-62.0007,0,-60.7966	1/2:55:0,32,23:0:0:32,23:1152,821:-161.22,-67.2204,-57.5875,-94.3572,0,-87.4335	1/2:31:0,22,9:0:0:22,9:792,324:-91.3803,-26.7966,-20.1739,-64.9435,0,-62.2342	1/2:27:0,20,7:0:0:20,7:720,252:-79.6621,-20.9217,-14.9011,-59.1001,0,-56.9929	1/2:22:0,14,8:0:0:14,8:504,288:-64.9745,-23.8592,-19.6447,-41.4751,0,-39.0669	1/2:26:0,16,10:0:0:16,10:576,360:-76.7024,-29.7045,-24.888,-47.3576,0,-44.3473	1/2:149:0,112,37:0:0:112,37:4028,1300:-434.281,-106.066,-72.351,-328.568,0,-317.43	1/2:155:0,110,45:0:0:110,45:3956,1603:-453.615,-130.964,-97.8502,-323.009,0,-309.462	1/2:152:0,104,47:0:0:104,47:3740,1692:-441.955,-137.165,-105.858,-304.791,0,-290.642	1/2:92:0,76,16:0:0:76,16:2729,568:-267.509,-46.6354,-23.7571,-221.229,0,-216.413	1/2:74:0,59,15:0:0:59,15:2108,536:-215.894,-44.0522,-26.2914,-172.199,0,-167.684	1/2:72:0,55,17:0:0:55,17:1975,608:-210.788,-49.9274,-33.3707,-161.218,0,-156.101	1/2:242:0,160,82:0:0:160,82:5740,2923:-704.612,-237.41,-189.245,-467.558,0,-442.874	1/2:218:0,124,94:0:0:124,94:4448,3362:-635.185,-272.484,-235.156,-363.057,0,-334.76	1/2:27:0,14,13:0:0:14,13:504,464:-79.2522,-38.1841,-33.9697,-41.4261,0,-37.5127	1/2:227:0,177,50:0:0:177,50:6334,1781:-660.03,-144.748,-91.4659,-515.637,0,-500.585	1/2:97:0,68,29:0:0:68,29:2444,1034:-283.679,-84.6048,-64.1347,-199.431,0,-190.702	1/2:91:0,77,14:0:0:77,14:2760,504:-265.916,-41.4252,-18.2459,-224.85,0,-220.636	1/2:27:0,19,8:0:0:19,8:669,288:-78.2444,-23.7868,-18.0672,-54.8144,0,-52.4061	1/2:66:0,41,25:0:0:41,25:1461,887:-191.579,-72.564,-60.2218,-119.37,0,-111.844	1/2:10:0,7,3:0:0:7,3:252,108:-29.666,-9.11335,-7.00614,-20.911,0,-20.0079	1/2:26:0,19,7:0:0:19,7:684,252:-76.7013,-20.9039,-15.1843,-56.157,0,-54.0498	1/2:43:0,29,14:0:0:29,14:1044,500:-126.195,-41.0076,-32.2777,-85.5449,0,-81.3305	1/2:174:0,109,65:0:0:109,65:3916,2305:-507.006,-187.798,-154.985,-319.564,0,-299.997	1/2:151:0,101,50:0:0:101,50:3601,1792:-439.74,-146.475,-116.071,-293.622,0,-278.571	1/2:38:0,30,8:0:0:30,8:1080,288:-111.852,-23.8305,-14.7996,-88.3806,0,-85.9723	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:120:0,77,43:0:0:77,43:2756,1544:-350.927,-126.29,-103.111,-224.995,0,-212.051	1/2:52:0,33,19:0:0:33,19:1188,684:-153.102,-56.1674,-46.2334,-97.2946,0,-91.575	1/2:164:0,120,44:0:0:120,44:4304,1544:-476.462,-125.65,-89.5267,-351.164,0,-337.919	1/2:42:0,28,14:0:0:28,14:1008,504:-123.678,-41.4477,-33.0189,-82.5901,0,-78.3757	1/2:43:0,33,10:0:0:33,10:1188,360:-126.485,-29.734,-19.8,-97.111,0,-94.1007	1/2:101:0,57,44:0:0:57,44:2052,1580:-296.366,-129.097,-111.938,-167.628,0,-154.382	1/2:85:0,67,18:0:0:67,18:2393,648:-248.2,-53.2333,-33.0643,-195.326,0,-189.908	1/2:180:0,107,72:0:0:107,72:3840,2575:-522.712,-209.673,-177.463,-313.039,0,-291.365	1/2:105:0,64,41:0:0:64,41:2300,1463:-307.193,-119.623,-100.357,-187.928,0,-175.585	1/2:86:0,69,17:0:0:69,17:2484,612:-252.907,-50.2734,-29.5024,-202.993,0,-197.875	1/2:177:0,101,76:0:0:101,76:3605,2728:-515.4,-221.816,-191.412,-293.941,0,-271.063	1/2:14:0,10,4:0:0:10,4:352,135:-39.8707,-11.2784,-8.26809,-28.9336,0,-27.7294	1/2:137:0,91,46:0:0:91,46:3272,1652:-401.998,-135.09,-107.697,-267.266,0,-253.419	1/2:27:0,16,11:0:0:16,11:576,388:-78.7214,-31.8455,-27.029,-47.2305,0,-43.9192	1/2:9:0,8,1:0:0:8,1:284,36:-26.4331,-3.29724,-0.889005,-23.4951,0,-23.1941	1/2:120:0,107,13:0:0:107,13:3829,453:-349.168,-37.18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chr07	16870738	.	T	C	32143.6	PASS	AB=0.319491;ABP=2292.9;AC=93;AF=0.494681;AN=188;AO=2585;CIGAR=1X;DP=8095;DPB=8095;DPRA=21.75;EPP=5607.58;EPPR=11909.3;GTI=1;LEN=1;MEANALT=1.03226;MQM=58.47;MQMR=58.6247;NS=94;NUMALT=1;ODDS=77.7394;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=92158;QR=197355;RO=5507;RPL=2584;RPP=5607.58;RPPR=11909.3;RPR=1;RUN=1;SAF=2585;SAP=5616.27;SAR=0;SRF=5507;SRP=11961.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:41,18:41:1463:18:644:-40.5013,0,-114.103	0/1:57:44,13:44:1568:13:468:-25.2784,0,-123.811	0/1:236:160,76:160:5737:76:2723:-174.241,0,-445.13	0/1:212:161,51:161:5788:51:1825:-100.551,0,-456.881	0/1:62:43,19:43:1525:19:684:-43.1106,0,-118.821	0/1:23:15,8:15:532:8:271:-17.7957,0,-41.2894	0/1:97:49,48:49:1760:48:1720:-120.368,0,-129.114	0/1:80:72,8:72:2569:8:279:-1.36513,0,-207.353	0/1:94:73,21:73:2624:21:739:-38.5071,0,-207.998	0/1:51:38,13:38:1364:13:468:-27.1071,0,-107.553	0/1:36:29,7:29:1044:7:248:-11.8271,0,-83.3989	0/1:98:54,44:54:1940:44:1549:-108.296,0,-145.362	0/1:35:16,19:16:576:19:680:-50.9931,0,-40.876	0/1:25:21,4:21:756:4:140:-5.41883,0,-60.7966	0/1:55:32,23:32:1152:23:828:-58.1837,0,-87.4335	0/1:31:22,9:22:788:9:324:-20.1739,0,-61.8736	0/1:28:21,7:21:744:7:252:-14.6001,0,-58.8494	0/1:22:14,8:14:504:8:288:-19.6447,0,-39.0669	0/1:27:16,11:16:576:11:396:-27.8254,0,-44.0463	0/1:148:112,36:112:4011:36:1288:-71.0637,0,-316.244	0/1:155:108,47:108:3869:47:1652:-102.264,0,-301.636	0/1:152:103,49:103:3708:49:1732:-109.51,0,-287.8	0/1:93:77,16:77:2760:16:561:-22.8213,0,-217.834	0/1:72:57,15:57:2040:15:521:-25.5245,0,-162.168	0/1:71:54,17:54:1928:17:612:-34.0226,0,-151.913	0/1:235:155,80:155:5557:80:2867:-186.312,0,-428.659	0/1:217:122,95:122:4372:95:3361:-235.338,0,-328.223	0/1:27:14,13:14:504:13:464:-33.9697,0,-37.5127	0/1:224:174,50:174:6239:50:1788:-93.0011,0,-493.072	0/1:96:67,29:67:2408:29:1030:-64.0753,0,-187.784	0/1:89:75,14:75:2680:14:504:-18.8479,0,-214.086	0/1:28:20,8:20:716:8:288:-17.7662,0,-56.3389	0/1:65:40,25:40:1440:25:868:-58.8076,0,-110.259	0/1:10:7,3:7:252:3:108:-7.00614,0,-20.0079	0/1:25:18,7:18:644:7:252:-15.4854,0,-50.7511	0/1:44:30,14:30:1076:14:504:-32.3386,0,-83.9075	0/1:168:106,62:106:3799:62:2220:-149.131,0,-291.286	0/1:150:100,50:100:3592:50:1796:-116.768,0,-278.007	0/1:37:29,8:29:1044:8:288:-15.1006,0,-83.0349	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:119:77,42:77:2760:42:1495:-99.0033,0,-212.712	0/1:51:33,18:33:1188:18:635:-42.1211,0,-91.8761	0/1:163:120,42:120:4304:42:1504:-85.5334,0,-338.323	0/1:40:27,13:27:968:13:460:-29.6877,0,-75.3809	0/1:43:32,11:32:1148:11:392:-22.6758,0,-90.5019	0/1:100:57,43:57:2040:43:1544:-109,0,-153.607	0/1:83:65,18:65:2328:18:633:-32.3096,0,-184.664	0/1:179:106,73:106:3796:73:2609:-180.861,0,-287.743	0/1:105:64,41:64:2285:41:1472:-101.168,0,-174.248	0/1:87:70,17:70:2520:17:608:-28.8399,0,-200.768	0/1:172:97,75:97:3469:75:2692:-189.68,0,-260.337	0/1:13:9,4:9:324:4:144:-9.40023,0,-25.5184	0/1:137:92,45:92:3304:45:1605:-103.466,0,-256.298	0/1:26:15,11:15:540:11:396:-28.0535,0,-40.9833	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5581	0/1:117:103,14:103:3686:14:491:-9.30061,0,-296.459	0/1:65:40,25:40:1436:25:877:-58.9125,0,-107.745	0/1:22:18,4:18:648:4:140:-6.29976,0,-51.9101	0/1:28:18,10:18:644:10:360:-24.1291,0,-49.837	0/1:55:40,15:40:1432:15:540:-32.3439,0,-112.55	0/1:93:50,43:50:1774:43:1527:-109.202,0,-131.784	0/1:10:9,1:9:320:1:36:-0.587975,0,-26.1282	0/1:175:125,49:125:4496:49:1756:-105.65,0,-351.69	0/1:155:106,49:106:3782:49:1751:-110.32,0,-293.803	0/1:46:40,6:40:1436:6:216:-5.94313,0,-115.651	0/1:109:73,36:73:2628:36:1288:-83.3655,0,-203.774	0/1:178:126,52:126:4513:52:1868:-114.413,0,-352.202	0/1:142:94,48:94:3368:48:1706:-110.975,0,-260.285	0/1:34:21,13:21:756:13:468:-32.1709,0,-58.0963	0/1:93:59,34:59:2116:34:1224:-82.4713,0,-162.699	0/1:60:36,24:36:1288:24:860:-59.6169,0,-97.614	0/1:30:24,6:24:845:6:207:-9.93599,0,-67.2744	0/1:177:140,37:140:5017:37:1315:-65.3243,0,-398.226	0/1:75:66,9:66:2353:9:324:-6.92861,0,-189.434	0/1:111:84,27:84:3012:27:960:-52.7747,0,-237.701	0/1:131:98,33:98:3516:33:1171:-65.6137,0,-277.124	0/1:155:84,71:84:3020:71:2544:-182.494,0,-224.852	0/1:79:59,20:59:2116:20:716:-40.9863,0,-166.899	0/1:19:15,4:15:540:4:144:-7.59405,0,-43.217	0/1:85:54,31:54:1936:31:1107:-74.3526,0,-148.929	0/1:125:77,48:77:2756:48:1711:-116.512,0,-210.596	0/1:244:141,103:141:5015:103:3655:-255.521,0,-377.424	0/1:43:31,12:31:1112:12:432:-26.2769,0,-86.8421	0/1:40:22,18:22:784:18:648:-46.6107,0,-58.7943	0/1:13:7,6:7:252:6:207:-15.0535,0,-19.1128	0/1:84:64,20:64:2304:20:711:-39.0291,0,-182.276	0/1:22:15,7:15:536:7:248:-16.0415,0,-41.9506	0/1:59:28,31:28:1004:31:1092:-80.7436,0,-72.854	0/1:72:39,33:39:1400:33:1184:-85.0805,0,-104.58	0/1:22:15,7:15:540:7:252:-16.4063,0,-42.3119	0/1:94:70,24:70:2503:24:837:-47.3392,0,-197.213	0/1:44:31,13:31:1116:13:468:-28.4637,0,-87.4556	0/1:125:73,51:73:2616:51:1794:-124.022,0,-198.058	0/1:99:47,52:47:1684:52:1868:-138.552,0,-121.978
chr07	17567479	.	A	T	70830.9	PASS	AB=0.489479;ABP=11.2352;AC=54;AF=0.287234;AN=188;AO=4206;CIGAR=1X;DP=14688;DPB=14688;DPRA=1.11586;EPP=9118.86;EPPR=22640.8;GTI=0;LEN=1;MEANALT=1.01515;MQM=59.9888;MQMR=59.9799;NS=94;NUMALT=1;ODDS=8.40841;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=150575;QR=375880;RO=10481;RPL=2;RPP=9118.86;RPPR=22640.8;RPR=4204;RUN=1;SAF=4206;SAP=9136.22;SAR=0;SRF=10481;SRP=22762.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:60:22,38:22:777:38:1364:-104.999,0,-52.1886	0/1:126:45,81:45:1620:81:2890:-222.405,0,-108.16	0/1:191:109,82:109:3916:82:2933:-206.707,0,-295.135	0/1:280:129,151:129:4602:151:5405:-402.29,0,-330.054	0/0:147:147,0:147:5276:0:0:0,-44.2514,-474.974	0/0:93:93,0:93:3336:0:0:0,-27.9958,-300.457	0/0:229:228,1:228:8131:1:36:0,-65.3376,-726.895	0/1:160:76,84:76:2720:84:3000:-222.065,0,-196.879	0/0:151:150,1:150:5388:1:36:0,-41.8573,-481.451	0/1:109:60,49:60:2148:49:1752:-125.152,0,-160.775	0/0:164:164,0:164:5900:0:0:0,-49.3689,-531.106	0/0:112:112,0:112:4016:0:0:0,-33.7154,-361.628	0/1:97:47,50:47:1677:50:1792:-132.363,0,-122.015	0/1:179:87,92:87:3105:92:3300:-243.334,0,-225.792	0/1:80:41,39:41:1468:39:1400:-102.217,0,-108.334	0/0:100:100,0:100:3588:0:0:0,-30.103,-323.126	0/0:142:142,0:142:5104:0:0:0,-42.7463,-459.501	0/0:91:91,0:91:3264:0:0:0,-27.3937,-293.98	0/1:67:34,33:34:1220:33:1184:-86.6993,0,-89.9378	0/1:303:132,171:132:4744:171:6125:-460.136,0,-335.904	0/0:177:176,1:176:6316:1:36:0,-49.684,-564.932	0/1:172:62,110:62:2217:110:3935:-302.565,0,-148.015	0/0:74:74,0:74:2644:0:0:0,-22.2762,-238.207	0/1:146:84,62:84:3012:62:2224:-156.474,0,-227.36	0/1:118:65,53:65:2340:53:1904:-136.116,0,-175.337	0/1:414:219,195:219:7857:195:6983:-503.907,0,-582.526	0/0:345:345,0:345:12385:0:0:0,-103.855,-1113.85	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/1:470:271,199:271:9732:199:7119:-499.284,0,-734.34	0/0:189:189,0:189:6784:0:0:0,-56.8947,-609.854	0/0:207:206,1:206:7380:1:36:0,-58.7149,-660.648	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/0:58:58,0:58:2069:0:0:0,-17.4597,-186.409	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/1:23:11,12:11:396:12:417:-30.9365,0,-29.0591	0/1:29:13,16:13:468:16:576:-43.4451,0,-33.7298	0/1:276:136,140:136:4887:140:5024:-369.221,0,-356.895	0/1:345:180,165:180:6414:165:5915:-428.602,0,-473.493	0/1:127:53,74:53:1908:74:2645:-200.064,0,-133.767	0/1:12:8,4:8:280:4:144:-9.70126,0,-21.9269	0/1:242:120,122:120:4312:122:4364:-320.084,0,-315.405	0/1:77:44,33:44:1580:33:1188:-84.0493,0,-119.312	0/1:196:107,89:107:3821:89:3183:-227.692,0,-285.084	0/1:100:56,44:56:2012:44:1580:-112.389,0,-151.25	0/1:84:52,32:52:1864:32:1148:-78.3433,0,-142.753	0/0:163:163,0:163:5848:0:0:0,-49.0679,-526.43	0/0:255:255,0:255:9164:0:0:0,-76.7626,-824.727	0/1:269:146,123:146:5225:123:4403:-315.465,0,-389.409	0/0:117:117,0:117:4204:0:0:0,-35.2205,-378.539	0/1:260:149,111:149:5337:111:3980:-280.122,0,-402.189	0/1:261:147,114:147:5261:114:4070:-287.916,0,-395.056	0/1:23:10,13:10:360:13:468:-35.536,0,-25.8206	0/1:258:115,143:115:4140:143:5125:-383.724,0,-295.116	0/0:73:72,1:72:2580:1:36:0,-18.3769,-228.851	0/1:41:22,19:22:792:19:676:-48.8258,0,-59.2634	0/1:205:114,91:114:4081:91:3243:-230.379,0,-305.763	0/1:101:47,54:47:1688:54:1928:-143.393,0,-121.803	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	0/0:43:41,2:41:1476:2:72:0,-6.10757,-126.299	0/0:161:160,1:160:5737:1:36:0,-44.8676,-512.837	0/0:238:238,0:238:8556:0:0:0,-71.6451,-770.033	0/1:9:6,3:6:212:3:108:-7.3659,0,-16.7155	0/0:305:305,0:305:10956:0:0:0,-91.8141,-985.931	0/0:295:291,4:291:10452:4:144:0,-75.4902,-926.79	0/1:121:68,53:68:2436:53:1904:-135.213,0,-183.071	0/0:138:138,0:138:4960:0:0:0,-41.5421,-446.547	0/1:273:121,151:121:4329:151:5407:-404.52,0,-307.544	0/1:118:38,80:38:1360:80:2860:-222.116,0,-87.1791	0/0:131:130,1:130:4664:1:36:0,-35.8367,-416.322	0/0:122:122,0:122:4369:0:0:0,-36.7257,-393.382	0/1:133:63,70:63:2268:70:2505:-185.664,0,-164.345	0/1:63:28,35:28:989:35:1252:-94.0202,0,-70.3571	0/0:201:199,2:199:7148:2:72:0,-53.6703,-636.31	0/1:86:43,43:43:1548:43:1532:-112.275,0,-113.724	0/0:363:363,0:363:12980:0:0:0,-109.274,-1168.01	0/0:251:250,1:250:8950:1:21:0,-73.4586,-803.377	0/1:230:144,86:144:5176:86:3084:-208.551,0,-396.741	0/0:169:166,3:166:5968:3:108:0,-40.7989,-527.148	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:171:171,0:171:6129:0:0:0,-51.4761,-551.707	0/1:160:79,81:79:2832:81:2898:-212.891,0,-206.954	0/1:416:227,189:227:8129:189:6771:-484.233,0,-606.395	0/1:130:54,76:54:1936:76:2702:-204.285,0,-135.382	0/1:94:48,46:48:1720:46:1652:-120.672,0,-126.789	0/1:105:58,47:58:2084:47:1679:-119.788,0,-156.222	0/1:177:103,74:103:3700:74:2656:-186.003,0,-279.916	0/0:62:62,0:62:2228:0:0:0,-18.6639,-200.784	0/0:128:128,0:128:4604:0:0:0,-38.5318,-414.522	0/0:110:110,0:110:3948:0:0:0,-33.1133,-355.511	0/1:133:66,67:66:2368:67:2404:-176.579,0,-173.341	0/1:280:159,121:159:5720:121:4346:-307.024,0,-430.625	0/1:106:42,64:42:1497:64:2291:-174.542,0,-103.113	0/0:170:170,0:170:6089:0:0:0,-51.1751,-548.109	0/0:117:117,0:117:4200:0:0:0,-35.2205,-378.18
chr07	18995542	.	CATAA	TATAA,TATAG	145316	PASS	AB=0.381921,0.613842;ABP=431.72,401.504;AC=140,48;AF=0.744681,0.255319;AN=188;AO=4528,2191;CIGAR=1X4M,1X3M1X;DP=6739;DPB=6738.8;DPRA=14.4817,1.09438;EPP=9593.74,4605.64;EPPR=5.18177;GTI=5;LEN=1,5;MEANALT=1.7957,2.24561;MQM=60,59.9932;MQMR=60;NS=94;NUMALT=2;ODDS=0.706263;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=161790,77656;QR=36;RO=1;RPL=28,18;RPP=9593.74,4605.64;RPPR=5.18177;RPR=4500,2173;RUN=1,1;SAF=4528,2191;SAP=9835.44,4760.71;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:43:0,28,14:0:0:28,14:1004,488:-121.63,-39.7327,-31.3039,-81.9451,0,-77.7306	1/2:55:0,15,39:0:0:15,39:525,1362:-153.489,-110.776,-106.261,-42.7034,0,-30.9632	1/2:190:0,61,129:0:0:61,129:2173,4566:-549.395,-372.278,-353.915,-177.473,0,-138.64	1/2:192:0,66,125:0:0:66,125:2348,4436:-552.87,-361.516,-341.648,-191.438,0,-153.809	1/1:29:0,29,0:0:0:29,0:1040,0:-93.9144,-8.72987,0,-93.9144,-8.72987,-93.9144	1/1:15:0,15,0:0:0:15,0:540,0:-48.9365,-4.51545,0,-48.9365,-4.51545,-48.9365	1/2:109:0,39,70:0:0:39,70:1396,2465:-314.877,-201.033,-189.293,-114.199,0,-93.1268	1/1:123:0,123,0:0:0:123,0:4412,0:-397.251,-37.0267,0,-397.251,-37.0267,-397.251	1/1:80:0,80,0:0:0:80,0:2872,0:-258.716,-24.0824,0,-258.716,-24.0824,-258.716	1/2:54:0,23,31:0:0:23,31:816,1108:-157.181,-90.699,-83.7753,-66.838,0,-57.5061	1/1:43:0,43,0:0:0:43,0:1544,0:-139.253,-12.9443,0,-139.253,-12.9443,-139.253	1/2:83:0,34,49:0:0:34,49:1220,1738:-241.468,-141.953,-131.718,-99.8718,0,-85.1213	1/2:46:0,26,20:0:0:26,20:932,714:-134.582,-58.5671,-50.7403,-76.3721,0,-70.3515	1/2:53:0,19,34:0:0:19,34:684,1206:-154.417,-98.6044,-92.8848,-56.1708,0,-45.9357	1/2:49:0,24,25:0:0:24,25:845,894:-142.043,-73.2548,-66.0301,-69.1432,0,-61.6175	1/1:42:0,42,0:0:0:42,0:1501,0:-135.383,-12.6433,0,-135.383,-12.6433,-135.383	1/1:21:0,21,0:0:0:21,0:752,0:-68.0063,-6.32163,0,-68.0063,-6.32163,-68.0063	1/1:25:0,23,2:0:0:23,2:824,72:-74.1236,-6.92369,0,-68.2487,-0.689028,-67.6466	1/2:28:0,13,15:0:0:13,15:455,535:-80.9845,-43.9688,-40.0554,-37.3686,0,-32.8531	1/2:212:0,64,147:0:0:64,147:2296,5220:-612.608,-425.33,-406.064,-187.275,0,-143.024	1/1:48:0,48,0:0:0:48,0:1705,0:-153.735,-14.4494,0,-153.735,-14.4494,-153.735	1/1:127:0,127,0:0:0:127,0:4535,0:-408.318,-38.2308,0,-408.318,-38.2308,-408.318	1/1:66:0,66,0:0:0:66,0:2346,0:-211.398,-19.868,0,-211.398,-19.868,-211.398	1/1:54:0,53,0:0:0:53,0:1896,0:-170.606,-15.9546,0,-170.606,-15.9546,-170.606	1/2:93:0,51,42:0:0:51,42:1802,1476:-267.246,-120.49,-105.138,-147.108,0,-134.465	1/2:268:0,97,170:0:0:97,170:3475,6039:-775.537,-492.133,-462.933,-283.45,0,-232.275	1/1:197:0,196,1:0:0:196,1:7004,35:-630.073,-59.0019,0,-627.226,-55.8043,-626.925	1/2:30:0,17,13:0:0:17,13:612,458:-87.5816,-37.6412,-32.5237,-50.2959,0,-46.3825	1/1:173:0,173,0:0:0:173,0:6191,0:-557.287,-52.0782,0,-557.287,-52.0782,-557.287	1/2:72:0,38,34:0:0:38,34:1368,1196:-209.336,-97.7101,-86.271,-111.982,0,-101.747	1/1:76:0,74,1:0:0:74,1:2646,36:-238.025,-22.2762,0,-235.088,-19.3388,-234.787	1/2:6:0,4,2:0:0:4,2:140,72:-17.6186,-6.23466,-5.03054,-11.7405,0,-11.1384	1/1:11:0,11,0:0:0:11,0:392,0:-35.6201,-3.31133,0,-35.6201,-3.31133,-35.6201	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	2/2:5:0,0,5:0:0:0,5:0,177:-16.277,-16.277,-16.277,-1.50515,-1.50515,0	1/2:12:0,5,7:0:0:5,7:180,248:-35.2466,-20.5571,-19.052,-15.0469,0,-12.9397	1/1:135:0,134,0:0:0:134,0:4777,0:-429.836,-40.338,0,-429.836,-40.338,-429.836	1/2:128:0,48,80:0:0:48,80:1719,2826:-370.689,-230.499,-216.049,-140.546,0,-116.464	1/2:33:0,20,13:0:0:20,13:707,466:-95.9429,-38.3653,-32.3447,-57.934,0,-54.0206	1/2:7:0,1,4:0:0:1,4:36,144:-14.7049,-11.7663,-11.4653,-2.94573,0,-1.74161	1/2:100:0,37,63:0:0:37,63:1324,2244:-291.226,-183.26,-172.121,-108.324,0,-89.3591	1/2:19:0,5,14:0:0:5,14:180,501:-55.9001,-41.2124,-39.7073,-15.0469,0,-10.8325	1/2:149:0,50,99:0:0:50,99:1792,3507:-432.195,-286.041,-270.989,-146.511,0,-116.709	1/2:28:0,13,15:0:0:13,15:459,526:-80.5331,-43.1542,-39.2408,-37.7307,0,-33.2152	1/2:40:0,21,19:0:0:21,19:756,674:-116.957,-55.2683,-48.9466,-62.0456,0,-56.326	1/1:72:0,72,0:0:0:72,0:2562,0:-230.829,-21.6742,0,-230.829,-21.6742,-230.829	1/1:87:0,87,0:0:0:87,0:3104,0:-279.588,-26.1896,0,-279.588,-26.1896,-279.588	1/2:223:0,80,143:0:0:80,143:2868,5044:-644.983,-411.065,-386.982,-234.275,0,-191.227	1/1:46:0,45,1:0:0:45,1:1612,36:-145.01,-13.5464,0,-142.073,-10.2491,-141.772	1/1:63:0,63,0:0:0:63,0:2264,0:-204.022,-18.9649,0,-204.022,-18.9649,-204.022	1/1:81:1,80,0:1:36:80,0:2880,0:-255.837,-20.7852,0,-256.138,-24.0824,-259.076	1/2:18:0,4,14:0:0:4,14:144,501:-52.9626,-41.2124,-40.0083,-12.1095,0,-7.89508	1/2:152:0,49,103:0:0:49,103:1748,3659:-441.008,-298.511,-283.76,-142.854,0,-111.848	1/1:52:0,52,0:0:0:52,0:1868,0:-168.399,-15.6536,0,-168.399,-15.6536,-168.399	1/2:7:0,1,6:0:0:1,6:36,214:-20.7395,-17.8016,-17.5006,-3.29724,0,-1.49106	1/2:103:0,47,54:0:0:47,54:1692,1886:-291.466,-153.403,-139.254,-138.059,0,-121.803	1/2:39:0,16,22:0:0:16,22:576,788: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chr07	19231601	.	CATA	CATG,GATG	318725	PASS	AB=0.421343,0.574527;ABP=315.237,283.304;AC=130,58;AF=0.691489,0.308511;AN=188;AO=8049,6796;CIGAR=3M1X,1X2M1X;DP=14896;DPB=14898.2;DPRA=0.569581,1.46961;EPP=17481.2,14760.3;EPPR=18.2106;GTI=10;LEN=1,4;MEANALT=2,2.5;MQM=59.9698,58.7054;MQMR=60;NS=94;NUMALT=2;ODDS=30675.3;PAIRED=0,0;PAIREDR=0;PAO=4.5,4.5;PQA=158,158;PQR=0;PRO=0;QA=287071,240354;QR=236;RO=7;RPL=0,0;RPP=17481.2,14760.3;RPPR=18.2106;RPR=8049,6796;RUN=1,1;SAF=8049,6796;SAP=17481.2,14760.3;SAR=0,0;SRF=7;SRP=18.2106;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	2/2:13:0,1,12:0:0:1,12:36,432:-38.8504,-35.913,-35.612,-3.61236,-0.315115,0	1/2:118:1,49,68:1:36:49,68:1730,2373:-329.959,-189.381,-177.568,-137.933,0,-120.4	1/2:74:0,22,52:0:0:22,52:773,1840:-213.098,-150.183,-143.56,-63.2668,0,-47.6133	1/2:248:0,99,149:0:0:99,149:3529,5240:-714.367,-426.723,-396.921,-287.998,0,-243.145	1/1:27:0,27,0:0:0:27,0:957,0:-86.4439,-8.12781,0,-86.4439,-8.12781,-86.4439	1/1:54:0,54,0:0:0:54,0:1919,0:-172.985,-16.2556,0,-172.985,-16.2556,-172.985	1/2:205:0,71,132:0:0:71,132:2532,4707:-589.568,-383.166,-361.793,-206.457,0,-166.721	1/1:270:0,270,0:0:0:270,0:9684,0:-871.318,-81.2781,0,-871.318,-81.2781,-871.318	1/1:144:0,144,0:0:0:144,0:5137,0:-462.47,-43.3483,0,-462.47,-43.3483,-462.47	1/2:120:0,55,65:0:0:55,65:1938,2303:-345.662,-187.879,-171.322,-158.136,0,-138.569	1/1:67:0,66,1:0:0:66,1:2338,36:-210.317,-19.868,0,-207.379,-16.5707,-207.078	1/2:103:0,51,52:0:0:51,52:1832,1826:-298.33,-148.877,-133.524,-149.808,0,-134.155	1/2:89:0,62,27:0:0:62,27:2201,963:-258.167,-78.8333,-60.1694,-179.69,0,-171.562	1/2:77:1,41,35:1:36:41,35:1457,1234:-215.903,-97.4756,-88.071,-115.785,0,-108.186	1/2:76:0,61,15:0:0:61,15:2179,537:-221.804,-44.15,-25.7872,-178.012,0,-173.496	1/1:64:0,64,0:0:0:64,0:2300,0:-207.261,-19.2659,0,-207.261,-19.2659,-207.261	1/1:107:0,106,0:0:0:106,0:3787,0:-340.601,-31.9092,0,-340.601,-31.9092,-340.601	1/1:108:0,107,0:0:0:107,0:3818,0:-343.455,-32.2102,0,-343.455,-32.2102,-343.455	1/2:146:0,30,114:0:0:30,114:1061,4040:-415.202,-328.787,-319.756,-86.4091,0,-52.0917	1/2:138:0,38,99:0:0:38,99:1368,3508:-397.255,-285.632,-274.192,-111.622,0,-81.8199	1/1:187:1,186,0:1:32:186,0:6615,0:-592.23,-53.0933,0,-592.531,-55.9916,-595.109	1/1:97:0,97,0:0:0:97,0:3472,0:-312.691,-29.1999,0,-312.691,-29.1999,-312.691	1/1:75:0,74,1:0:0:74,1:2626,36:-236.195,-22.2762,0,-233.258,-18.979,-232.957	1/1:30:0,30,0:0:0:30,0:1076,0:-97.1529,-9.0309,0,-97.1529,-9.0309,-97.1529	1/2:110:0,49,61:0:0:49,61:1747,2162:-318.553,-176.275,-161.525,-142.633,0,-124.27	1/2:397:0,212,185:0:0:212,185:7555,6549:-1149.51,-533.697,-469.879,-616.171,0,-560.48	1/1:263:0,260,0:0:0:260,0:9261,0:-833.111,-78.2678,0,-833.111,-78.2678,-833.111	1/1:66:0,66,0:0:0:66,0:2360,0:-212.659,-19.868,0,-212.659,-19.868,-212.659	1/1:217:0,217,0:0:0:217,0:7701,0:-693.123,-65.3235,0,-693.123,-65.3235,-693.123	1/2:140:0,56,83:0:0:56,83:2001,2947:-403.207,-240.059,-223.201,-163.144,0,-138.159	1/1:121:0,121,0:0:0:121,0:4294,0:-386.635,-36.4246,0,-386.635,-36.4246,-386.635	2/2:584:0,4,577:0:0:4,577:140,20379:-1832.49,-1821.1,-1819.9,-173.694,-162.319,0	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	2/2:350:0,6,342:0:0:6,342:216,12022:-1079.46,-1061.83,-1060.02,-102.952,-85.3277,0	2/2:276:0,0,276:0:0:0,276:0,9758:-876.527,-876.527,-876.527,-83.0843,-83.0843,0	1/1:360:0,358,0:0:0:358,0:12768,0:-1148.58,-107.769,0,-1148.58,-107.769,-1148.58	1/2:199:0,86,113:0:0:86,113:3055,4012:-575.56,-326.625,-300.736,-249.289,0,-215.273	1/2:254:1,46,206:1:30:46,206:1641,7319:-726.358,-592.886,-581.437,-131.453,0,-71.8388	2/2:202:0,2,200:0:0:2,200:72,7083:-637.071,-631.196,-630.594,-60.206,-53.9713,0	1/2:192:0,68,123:0:0:68,123:2428,4353:-552.106,-354.156,-333.686,-197.946,0,-160.919	1/2:116:0,24,92:0:0:24,92:849,3267:-335.58,-266.431,-259.206,-69.5031,0,-41.8083	1/2:261:0,132,127:0:0:132,127:4728,4468:-748.925,-363.338,-323.602,-385.563,0,-347.332	1/2:132:0,105,27:0:0:105,27:3772,943:-384.762,-77.043,-45.4348,-308.07,0,-299.942	1/2:84:0,59,25:0:0:59,25:2120,891:-245.873,-72.9268,-55.166,-173.303,0,-165.777	1/1:295:0,295,0:0:0:295,0:10488,0:-943.776,-88.8039,0,-943.776,-88.8039,-943.776	1/1:87:0,87,0:0:0:87,0:3124,0:-281.326,-26.1896,0,-281.326,-26.1896,-281.326	1/2:210:0,90,120:0:0:90,120:3215,4238:-607.49,-345.365,-318.272,-262.481,0,-226.357	1/1:162:1,161,0:1:30:161,0:5780,0:-517.311,-45.7673,0,-517.612,-48.4658,-520.01	1/1:166:0,166,0:0:0:166,0:5927,0:-533.535,-49.971,0,-533.535,-49.971,-533.535	1/1:149:0,149,0:0:0:149,0:5317,0:-478.624,-44.8535,0,-478.624,-44.8535,-478.624	2/2:242:0,1,241:0:0:1,241:36,8529:-766.98,-764.043,-763.742,-72.5482,-69.251,0	1/2:99:0,41,58:0:0:41,58:1468,2072:-288.739,-169.022,-156.68,-120.074,0,-102.614	1/1:16:0,16,0:0:0:16,0:576,0:-52.175,-4.81648,0,-52.175,-4.81648,-52.175	2/2:789:0,24,762:0:0:24,762:860,26890:-2416.35,-2346.21,-2338.99,-229.385,-159.23,0	1/2:120:0,53,67:0:0:53,67:1881,2384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chr07	19231644	.	T	C	129767	PASS	AB=0.569158;ABP=240.888;AC=58;AF=0.308511;AN=188;AO=6684;CIGAR=1X;DP=14766;DPB=14766;DPRA=1.77846;EPP=14517.1;EPPR=17533.3;GTI=12;LEN=1;MEANALT=1.08197;MQM=58.749;MQMR=59.9606;NS=94;NUMALT=1;ODDS=1.36492;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235288;QR=288722;RO=8077;RPL=6684;RPP=14517.1;RPPR=17533.3;RPR=0;RUN=1;SAF=6684;SAP=14517.1;SAR=0;SRF=8077;SRP=17542;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:13:1,12:1:36:12:432:-35.612,-0.315115,0	0/1:117:48,69:48:1724:69:2420:-182.606,0,-120.225	0/1:73:22,51:22:792:51:1792:-139.543,0,-49.6305	0/1:243:99,144:99:3556:144:5049:-381.262,0,-247.079	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/0:55:55,0:55:1956:0:0:0,-16.5566,-176.313	0/1:205:72,133:72:2588:133:4688:-359.758,0,-171.457	0/0:279:278,1:278:9907:1:36:0,-80.3891,-887.966	0/0:139:139,0:139:4987:0:0:0,-41.8432,-448.974	0/1:120:56,64:56:2012:64:2283:-169.55,0,-145.23	0/0:68:67,1:67:2408:1:36:0,-16.8718,-213.378	0/1:100:51,49:51:1810:49:1668:-120.259,0,-133.077	0/1:86:62,24:62:2228:24:833:-49.3772,0,-174.895	0/1:75:43,32:43:1532:32:1137:-79.9866,0,-115.596	0/1:77:62,15:62:2224:15:532:-25.0338,0,-177.245	0/0:64:64,0:64:2278:0:0:0,-19.2659,-205.281	0/0:111:111,0:111:3948:0:0:0,-33.4143,-355.503	0/0:111:111,0:111:3967:0:0:0,-33.4143,-356.032	0/1:144:34,110:34:1216:110:3875:-305.326,0,-66.3982	0/1:138:38,100:38:1351:100:3526:-275.868,0,-80.3475	0/0:187:185,2:185:6589:2:72:0,-49.4559,-586.254	0/0:95:94,1:94:3376:1:36:0,-24.9996,-300.456	0/0:75:74,1:74:2664:1:36:0,-18.979,-235.917	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:109:50,59:50:1792:59:2062:-152.873,0,-128.621	0/1:394:213,180:213:7609:180:6334:-451.422,0,-566.181	0/0:265:265,0:265:9457:0:0:0,-79.7729,-850.86	0/0:63:63,0:63:2253:0:0:0,-18.9649,-203.031	0/0:215:215,0:215:7716:0:0:0,-64.7214,-694.47	0/1:136:54,82:54:1927:82:2913:-221.422,0,-132.766	0/0:121:121,0:121:4333:0:0:0,-36.4246,-390.143	1/1:573:4,569:4:140:569:20078:-1793.05,-159.546,0	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	1/1:345:3,341:3:108:341:12023:-1070.52,-93.809,0	1/1:272:2,270:2:72:270:9533:-850.303,-75.0434,0	0/0:356:355,1:355:12712:1:27:0,-104.467,-1141.2	0/1:194:85,109:85:2988:109:3878:-290.805,0,-210.746	0/1:252:48,204:48:1715:204:7146:-566.295,0,-78.7753	1/1:196:3,193:3:108:193:6878:-608.943,-48.9267,0	0/1:188:70,118:70:2504:118:4146:-316.485,0,-169.019	0/1:112:23,89:23:801:89:3147:-249.64,0,-38.6911	0/1:253:132,121:132:4723:121:4297:-310.441,0,-349.068	0/1:130:104,26:104:3685:26:904:-42.5096,0,-292.72	0/1:81:56,25:56:2008:25:869:-54.0833,0,-156.61	0/0:294:293,1:293:10492:1:36:0,-84.9045,-940.532	0/0:85:85,0:85:3020:0:0:0,-25.5875,-272.03	0/1:211:92,119:92:3291:119:4201:-314.699,0,-232.892	0/0:161:161,0:161:5756:0:0:0,-48.4658,-518.152	0/0:171:171,0:171:6152:0:0:0,-51.4761,-553.775	0/0:145:145,0:145:5198:0:0:0,-43.6493,-467.871	1/1:237:1,236:1:36:236:8356:-748.168,-67.7458,0	0/1:96:41,55:41:1472:55:1948:-146.51,0,-103.877	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	1/1:771:24,747:24:860:747:26311:-2287.2,-154.372,0	0/1:120:52,67:52:1847:67:2360:-176.295,0,-130.327	0/1:169:48,121:48:1715:121:4211:-328.227,0,-103.761	1/1:402:2,400:2:72:400:14193:-1269.64,-114.177,0	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/0:172:172,0:172:6123:0:0:0,-51.7772,-551.171	1/1:479:10,469:10:360:469:16506:-1452.02,-111.449,0	0/0:241:241,0:241:8642:0:0:0,-72.5482,-777.766	0/0:105:102,3:102:3656:3:95:0,-22.7439,-320.379	0/1:100:56,44:56:2008:44:1557:-109.759,0,-150.89	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/1:269:130,139:130:4645:139:4889:-358.768,0,-337.217	0/1:94:15,79:15:540:79:2743:-218.726,0,-20.6397	0/1:110:19,91:19:676:91:3123:-248.067,0,-28.0547	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/1:97:61,35:61:2184:35:1206:-79.6014,0,-167.607	1/1:180:11,169:11:396:169:5975:-501.69,-18.2027,0	0/0:98:98,0:98:3498:0:0:0,-29.5009,-315.03	0/1:96:59,37:59:2106:37:1294:-87.6271,0,-160.909	0/0:119:119,0:119:4242:0:0:0,-35.8226,-381.957	0/0:180:179,1:179:6431:1:32:0,-50.9861,-575.674	0/1:85:27,58:27:957:58:2041:-158.064,0,-60.8563	0/0:150:150,0:150:5375:0:0:0,-45.1545,-483.872	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:106:104,2:104:3728:2:60:0,-26.2141,-330.025	0/0:100:99,1:99:3499:1:36:0,-26.5057,-311.524	0/0:211:211,0:211:7560:0:0:0,-63.5173,-680.436	0/0:178:176,2:176:6298:2:72:0,-46.7466,-560.067	0/1:74:43,31:43:1536:31:1093:-76.4019,0,-116.257	0/1:174:124,50:124:4387:50:1749:-105.281,0,-342.618	0/1:216:147,69:147:5263:69:2374:-148.805,0,-408.783	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.445	0/0:130:130,0:130:4618:0:0:0,-39.1339,-415.783	0/0:105:103,2:103:3692:2:68:0,-25.1504,-326.024	0/1:191:24,167:24:856:167:5869:-470.675,0,-19.8644	0/1:292:45,246:45:1616:246:8553:-681.598,0,-57.7008	0/1:105:58,47:58:2075:47:1651:-117.203,0,-155.411	0/0:130:130,0:130:4618:0:0:0,-39.1339,-415.783	0/0:155:155,0:155:5498:0:0:0,-46.6596,-494.946
chr07	19616709	.	A	G	35566.7	PASS	AB=0.470804;ABP=39.4013;AC=49;AF=0.260638;AN=188;AO=2343;CIGAR=1X;DP=9855;DPB=9855;DPRA=1.05677;EPP=5090.77;EPPR=16284.7;GTI=0;LEN=1;MEANALT=1;MQM=53.2774;MQMR=59.4497;NS=94;NUMALT=1;ODDS=2.80052;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=80986;QR=267924;RO=7510;RPL=0;RPP=5090.77;RPPR=16284.7;RPR=2343;RUN=1;SAF=0;SAP=5090.77;SAR=2343;SRF=0;SRP=16310.8;SRR=7510;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:20,12:20:720:12:405:-26.2359,0,-55.4739	0/1:96:60,36:60:2156:36:1260:-84.3963,0,-165.384	0/1:113:66,47:66:2291:47:1625:-111.262,0,-171.996	0/1:135:74,61:74:2639:61:2126:-149.771,0,-197.106	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:22:22,0:22:788:0:0:0,-6.62266,-70.9014	0/1:141:88,53:88:3145:53:1848:-123.695,0,-240.817	0/0:198:198,0:198:7066:0:0:0,-59.6039,-633.755	0/0:77:77,0:77:2703:0:0:0,-23.1793,-243.282	0/1:113:57,56:57:2021:56:1973:-143.347,0,-147.468	0/0:143:143,0:143:5086:0:0:0,-43.0473,-457.621	0/1:91:48,43:48:1702:43:1472:-104.853,0,-125.78	0/1:87:38,49:38:1368:49:1669:-123.761,0,-97.2312	0/1:160:81,79:81:2904:79:2727:-196.178,0,-213.389	0/1:102:51,51:51:1789:51:1788:-129.633,0,-130.485	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.55	0/0:135:135,0:135:4810:0:0:0,-40.639,-432.959	0/0:114:114,0:114:4072:0:0:0,-34.3174,-366.562	0/1:102:59,43:59:2098:43:1479:-101.975,0,-158.351	0/1:155:74,81:74:2621:81:2836:-208.273,0,-189.273	0/0:157:157,0:157:5617:0:0:0,-47.2617,-505.09	0/0:106:106,0:106:3772:0:0:0,-31.9092,-339.615	0/0:79:79,0:79:2832:0:0:0,-23.7814,-255.106	0/0:119:119,0:119:4260:0:0:0,-35.8226,-383.259	0/1:84:39,45:39:1391:45:1574:-116.159,0,-100.186	0/1:432:263,169:263:9354:169:5979:-407.17,0,-710.026	0/0:183:182,0:182:6491:0:0:0,-54.7875,-583.815	0/0:55:54,1:54:1917:1:21:0,-14.4572,-170.701	0/0:169:168,1:168:6032:1:36:0,-47.2768,-539.312	0/1:78:37,41:37:1324:41:1397:-101.832,0,-95.964	0/0:69:69,0:69:2461:0:0:0,-20.7711,-221.419	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.3072	0/0:12:12,0:12:402:0:0:0,-3.61236,-36.49	0/1:11:5,6:5:180:6:212:-16.063,0,-13.2407	0/1:14:10,4:10:360:4:140:-8.66532,0,-28.5216	0/0:291:291,0:291:10388:0:0:0,-87.5997,-933.302	0/1:276:151,125:151:5424:125:4352:-307.666,0,-405.13	0/1:109:61,48:61:2166:48:1644:-115.023,0,-162.318	1/1:8:0,8:0:0:8:288:-26.1,-2.40824,0	0/1:59:31,28:31:1100:28:946:-67.4098,0,-81.5387	0/1:70:41,29:41:1459:29:959:-65.2631,0,-110.335	0/1:137:73,64:73:2615:64:2135:-150.741,0,-193.472	0/1:111:58,53:58:2057:53:1835:-131.686,0,-151.98	0/1:88:48,40:48:1724:40:1335:-93.7781,0,-128.948	0/0:154:154,0:154:5504:0:0:0,-46.3586,-495.329	0/0:77:77,0:77:2746:0:0:0,-23.1793,-247.365	0/1:125:68,57:68:2431:57:1992:-140.649,0,-181.404	0/0:144:144,0:144:5155:0:0:0,-43.3483,-464	0/0:178:178,0:178:6347:0:0:0,-53.5833,-571.285	0/0:112:112,0:112:3969:0:0:0,-33.7154,-356.735	0/1:7:3,4:3:108:4:144:-11.1968,0,-7.96554	0/1:116:56,60:56:1995:60:2101:-153.894,0,-144.879	0/0:52:51,1:51:1819:1:36:0,-12.0563,-160.383	0/1:14:8,6:8:288:6:212:-15.0115,0,-22.0447	0/1:105:58,47:58:2072:47:1624:-113.797,0,-155.091	0/1:70:34,36:34:1216:36:1229:-89.4481,0,-88.6627	1/1:7:0,7:0:0:7:248:-22.6583,-2.10721,0	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:73:72,1:72:2580:1:36:0,-18.382,-228.83	0/0:150:150,0:150:5364:0:0:0,-45.1545,-482.783	0/1:13:8,5:8:284:5:180:-12.5389,0,-21.99	0/0:108:108,0:108:3844:0:0:0,-32.5112,-344.965	0/0:186:185,1:185:6628:1:36:0,-52.3959,-592.976	0/1:66:37,29:37:1309:29:1000:-70.0358,0,-98.2366	0/0:74:73,1:73:2600:1:27:0,-19.6027,-231.485	0/1:259:123,136:123:4393:136:4694:-343.342,0,-317.492	0/1:108:43,65:43:1544:65:2259:-170.454,0,-106.112	0/1:78:31,47:31:1101:47:1574:-117.531,0,-75.9098	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.028	0/1:146:72,74:72:2551:74:2540:-184.448,0,-185.826	0/1:21:15,6:15:540:6:216:-13.3862,0,-42.6126	0/0:23:22,1:22:779:1:36:0,-3.34064,-66.4776	0/1:76:37,39:37:1324:39:1379:-100.378,0,-96.5767	0/0:235:233,2:233:8318:2:72:0,-63.915,-741.523	0/0:102:102,0:102:3656:0:0:0,-30.7051,-329.23	0/1:110:71,39:71:2529:39:1321:-85.5333,0,-194.733	0/0:168:167,0:167:5938:0:0:0,-50.272,-534.103	0/0:21:21,0:21:752:0:0:0,-6.32163,-67.9787	0/0:108:105,3:105:3763:3:104:0,-22.8237,-329.143	0/0:103:103,0:103:3691:0:0:0,-31.0061,-332.236	0/0:200:198,2:198:7060:2:72:0,-53.3742,-628.336	0/0:111:111,0:111:3951:0:0:0,-33.4143,-355.534	0/1:107:51,56:51:1824:56:1907:-138.699,0,-132.203	0/1:108:48,60:48:1704:60:2021:-149.269,0,-121.124	0/1:189:101,88:101:3610:88:3032:-214.937,0,-268.192	0/0:34:34,0:34:1215:0:0:0,-10.235,-109.656	0/0:127:127,0:127:4507:0:0:0,-38.2308,-405.616	0/0:102:102,0:102:3652:0:0:0,-30.7051,-328.845	0/1:96:51,45:51:1808:45:1526:-108.09,0,-134.091	0/1:225:118,107:118:4212:107:3738:-267.184,0,-311.363	0/1:80:35,45:35:1252:45:1569:-116.641,0,-88.9003	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.008	0/0:99:99,0:99:3542:0:0:0,-29.802,-318.722
chr07	19945770	.	TTTA	CTTA	108772	PASS	AB=0.536008;ABP=38.6647;AC=140;AF=0.744681;AN=188;AO=5156;CIGAR=1X3M;DP=6638;DPB=6638;DPRA=0;EPP=11199.1;EPPR=3175.53;GTI=1;LEN=1;MEANALT=1.18085;MQM=59.9676;MQMR=59.9719;NS=94;NUMALT=1;ODDS=2.6359;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=183925;QR=51438;RO=1461;RPL=0;RPP=11199.1;RPPR=3175.53;RPR=5156;RUN=1;SAF=0;SAP=11199.1;SAR=5156;SRF=0;SRP=3175.53;SRR=1461;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:80:29,50:29:1003:50:1777:-136.129,0,-66.4964	0/1:40:18,22:18:625:22:788:-59.2036,0,-44.5325	0/1:239:108,130:108:3774:130:4660:-347.616,0,-267.916	0/1:103:53,48:53:1859:48:1705:-122.97,0,-136.825	1/1:29:0,29:0:0:29:1038:-93.7339,-8.72987,0	1/1:49:0,49:0:0:49:1752:-157.964,-14.7505,0	1/1:112:0,112:0:0:112:4024:-362.347,-33.7154,0	1/1:94:0,94:0:0:94:3372:-303.695,-28.2968,0	1/1:111:0,111:0:0:111:3953:-355.958,-33.4143,0	0/1:40:13,27:13:457:27:964:-75.0356,0,-29.4223	1/1:53:0,53:0:0:53:1891:-170.468,-15.9546,0	0/1:112:50,62:50:1731:62:2224:-166.709,0,-122.356	0/1:67:34,33:34:1215:33:1179:-86.2482,0,-89.4881	0/1:48:28,20:28:994:20:720:-50.6793,0,-75.3258	0/1:82:42,39:42:1481:39:1388:-100.485,0,-108.842	1/1:55:0,55:0:0:55:1946:-175.388,-16.5567,0	1/1:49:0,49:0:0:49:1747:-157.514,-14.7505,0	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	0/1:35:18,16:18:641:16:572:-41.2845,0,-47.4912	0/1:51:26,25:26:902:25:896:-65.6078,0,-66.1379	1/1:174:1,173:1:36:173:6159:-550.802,-48.7809,0	1/1:105:0,104:0:0:104:3689:-331.911,-31.3071,0	1/1:59:0,59:0:0:59:2114:-190.528,-17.7608,0	1/1:42:0,42:0:0:42:1491:-134.484,-12.6433,0	0/1:61:24,37:24:859:37:1332:-101.82,0,-59.2693	0/1:136:68,68:68:2391:68:2425:-177.564,0,-174.508	1/1:169:0,169:0:0:169:6012:-541.157,-50.8741,0	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	0/1:170:81,89:81:2854:89:3170:-234.339,0,-205.925	0/1:79:27,51:27:957:51:1819:-140.15,0,-62.6061	1/1:103:0,103:0:0:103:3687:-332.031,-31.0061,0	0/1:8:7,1:7:249:1:36:-1.19004,0,-20.3474	1/1:32:0,32:0:0:32:1143:-103.18,-9.63296,0	1/1:8:0,8:0:0:8:273:-24.9002,-2.40824,0	0/1:19:6,13:6:208:13:464:-36.3779,0,-13.3394	0/1:31:10,21:10:357:21:756:-59.0353,0,-23.1403	1/1:166:0,166:0:0:166:5903:-531.381,-49.971,0	0/1:89:52,37:52:1840:37:1320:-92.3103,0,-139.085	0/1:57:29,28:29:1007:28:999:-73.0658,0,-73.7813	0/1:9:3,6:3:105:6:216:-17.0812,0,-7.0867	0/1:84:31,53:31:1082:53:1873:-143.561,0,-72.401	0/1:47:24,23:24:853:23:824:-60.3349,0,-62.9429	0/1:120:44,75:44:1574:75:2684:-205.623,0,-105.77	0/1:37:15,21:15:537:21:748:-56.4956,0,-37.5154	0/1:38:22,16:22:775:16:568:-40.0127,0,-58.6326	1/1:109:0,108:0:0:108:3841:-345.523,-32.5112,0	1/1:68:0,68:0:0:68:2409:-217.066,-20.47,0	0/1:92:48,44:48:1680:44:1580:-114.797,0,-123.79	1/1:56:1,55:1:35:55:1961:-173.265,-13.3591,0	1/1:60:1,59:1:36:59:2116:-187.11,-14.4635,0	1/1:82:0,81:0:0:81:2903:-261.165,-24.3834,0	0/1:13:3,10:3:95:10:360:-28.8309,0,-4.95094	0/1:80:24,55:24:844:55:1968:-153.41,0,-52.2915	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	0/1:7:6,1:6:193:1:36:-1.49107,0,-15.5788	0/1:66:31,35:31:1082:35:1229:-91.0434,0,-77.819	0/1:25:7,18:7:251:18:644:-50.7648,0,-15.4097	0/1:15:6,9:6:214:9:324:-24.9904,0,-15.0924	1/1:13:0,11:0:0:11:396:-35.6229,-3.31133,0	1/1:66:0,66:0:0:66:2343:-211.114,-19.868,0	1/1:106:0,106:0:0:106:3781:-340.471,-31.9092,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	1/1:96:0,96:0:0:96:3452:-310.891,-28.8989,0	1/1:127:1,125:1:36:125:4455:-397.508,-34.6913,0	0/1:51:18,33:18:632:33:1184:-91.5158,0,-41.8545	1/1:39:0,39:0:0:39:1385:-124.947,-11.7402,0	0/1:74:28,45:28:984:45:1616:-123.512,0,-66.653	0/1:75:49,26:49:1735:26:936:-61.9822,0,-133.858	0/1:51:23,28:23:816:28:996:-74.6024,0,-58.4095	1/1:44:0,41:0:0:41:1464:-131.696,-12.3422,0	0/1:46:20,25:20:707:25:892:-66.7105,0,-50.0681	0/1:17:7,10:7:242:10:360:-27.6268,0,-16.9957	1/1:122:0,122:0:0:122:4303:-387.445,-36.7257,0	0/1:49:29,20:29:1038:20:701:-48.6613,0,-78.9841	1/1:247:0,247:0:0:247:8830:-794.68,-74.3544,0	1/1:84:0,84:0:0:84:3000:-270.161,-25.2865,0	0/1:106:49,57:49:1738:57:2035:-151.512,0,-124.795	1/1:46:0,46:0:0:46:1652:-148.967,-13.8474,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:47:0,47:0:0:47:1677:-151.215,-14.1484,0	1/1:71:0,71:0:0:71:2517:-226.781,-21.3731,0	1/1:138:0,138:0:0:138:4934:-444.21,-41.5421,0	1/1:56:0,56:0:0:56:1967:-177.302,-16.8577,0	0/1:84:40,44:40:1415:44:1562:-115.584,0,-102.361	0/1:51:22,29:22:778:29:1027:-77.3896,0,-54.9902	0/1:125:56,69:56:1974:69:2471:-185.014,0,-140.306	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	1/1:52:0,52:0:0:52:1833:-165.249,-15.6536,0	1/1:66:0,66:0:0:66:2368:-213.378,-19.868,0	0/1:90:33,57:33:1165:57:2048:-157.499,0,-78.0641	0/1:117:64,53:64:2252:53:1883:-134.527,0,-167.724	0/1:46:29,17:29:1022:17:608:-41.2046,0,-78.4446	1/1:58:0,58:0:0:58:2065:-186.119,-17.4597,0	1/1:85:0,85:0:0:85:3044:-274.19,-25.5876,0
chr07	19945779	.	TAAAC	TAAAG	22380.1	PASS	AB=0.44573;ABP=84.7947;AC=48;AF=0.255319;AN=188;AO=1428;CIGAR=4M1X;DP=6783;DPB=6783;DPRA=0.896218;EPP=3095.19;EPPR=11563.9;GTI=2;LEN=1;MEANALT=1.19608;MQM=59.9867;MQMR=59.9511;NS=94;NUMALT=1;ODDS=0.448479;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=50675;QR=187747;RO=5332;RPL=1;RPP=3095.19;RPPR=11563.9;RPR=1427;RUN=1;SAF=0;SAP=3103.87;SAR=1428;SRF=0;SRP=11581.3;SRR=5332;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:83:54,29:54:1878:29:1040:-68.9289,0,-144.31	0/1:40:23,17:23:813:17:604:-42.6494,0,-61.4501	0/1:248:141,105:141:4976:105:3733:-261.824,0,-373.65	0/1:99:47,52:47:1656:52:1826:-134.817,0,-119.525	0/0:29:29,0:29:1022:0:0:0,-8.72987,-92.2924	0/0:51:51,0:51:1777:0:0:0,-15.3525,-160.211	0/0:116:116,0:116:4103:0:0:0,-34.9195,-369.459	0/0:97:97,0:97:3453:0:0:0,-29.1999,-310.985	0/0:115:115,0:115:4028:0:0:0,-34.6184,-362.556	0/1:39:27,9:27:938:9:324:-18.3264,0,-73.5574	0/0:56:56,0:56:1979:0:0:0,-16.8577,-178.384	0/1:112:63,49:63:2214:49:1698:-119.383,0,-165.81	0/1:68:34,33:34:1211:33:1160:-84.1753,0,-88.766	0/1:49:20,29:20:693:29:1040:-79.1639,0,-47.9393	0/1:81:41,40:41:1437:40:1419:-103.623,0,-105.24	0/0:55:55,0:55:1917:0:0:0,-16.5566,-172.799	0/0:50:47,0:47:1654:0:0:0,-14.1484,-148.515	0/0:29:29,0:29:989:0:0:0,-8.72987,-89.3151	0/1:36:18,18:18:629:18:616:-44.9212,0,-46.0979	0/1:52:26,26:26:913:26:932:-68.543,0,-66.8316	0/0:181:180,1:180:6271:1:36:0,-50.8882,-560.862	0/0:112:112,0:112:3945:0:0:0,-33.7154,-355.248	0/0:60:60,0:60:2134:0:0:0,-18.0618,-192.329	0/0:46:46,0:46:1586:0:0:0,-13.8474,-143.026	0/1:62:38,24:38:1340:24:849:-58.064,0,-102.236	0/1:136:69,67:69:2428:67:2404:-175.676,0,-177.834	0/0:173:173,0:173:6147:0:0:0,-52.0782,-553.248	0/0:28:28,0:28:980:0:0:0,-8.42884,-88.5122	0/1:172:91,81:91:3203:81:2874:-207.12,0,-236.705	0/1:80:52,28:52:1805:28:993:-65.6001,0,-138.645	0/0:102:102,0:102:3583:0:0:0,-30.7051,-322.682	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	0/0:34:34,0:34:1201:0:0:0,-10.235,-108.393	0/0:8:8,0:8:273:0:0:0,-2.40824,-24.902	0/1:20:14,6:14:486:6:216:-13.7699,0,-38.0476	0/1:33:23,8:23:819:8:288:-16.5756,0,-64.3412	0/0:172:171,0:171:6019:0:0:0,-51.4761,-541.465	0/1:89:37,51:37:1330:51:1820:-137.339,0,-93.259	0/1:59:29,29:29:1007:29:999:-72.5325,0,-73.2553	0/1:9:6,3:6:211:3:99:-6.52731,0,-16.624	0/1:87:56,31:56:1962:31:1091:-72.3091,0,-150.665	0/1:46:23,22:23:822:22:773:-55.9837,0,-60.3968	0/1:119:75,44:75:2649:44:1576:-106.309,0,-202.835	0/1:38:24,14:24:835:14:504:-34.259,0,-64.0249	0/1:39:18,21:18:621:21:733:-54.5495,0,-44.4725	0/0:115:115,0:115:4043:0:0:0,-34.6184,-364.061	0/0:71:71,0:71:2513:0:0:0,-21.3731,-226.421	0/1:93:46,47:46:1630:47:1676:-123.131,0,-118.992	0/0:57:56,1:56:1988:1:32:0,-13.9594,-175.994	0/0:60:59,1:59:2102:1:36:0,-14.4635,-185.851	0/0:84:83,0:83:2923:0:0:0,-24.9855,-262.946	0/1:13:10,3:10:345:3:108:-6.16178,0,-27.4685	0/1:82:60,22:60:2089:22:788:-46.5603,0,-163.592	0/0:25:25,0:25:894:0:0:0,-7.52575,-80.7804	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/1:66:35,31:35:1252:31:1103:-79.7118,0,-93.1172	0/1:28:21,7:21:748:7:252:-14.5977,0,-59.2163	0/1:15:9,6:9:312:6:216:-15.2751,0,-23.8996	0/0:13:13,0:13:463:0:0:0,-3.91339,-42.0069	0/0:67:67,0:67:2360:0:0:0,-20.169,-212.645	0/0:106:105,0:105:3713:0:0:0,-31.6081,-333.999	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:100:100,0:100:3562:0:0:0,-30.103,-320.789	0/0:134:134,0:134:4669:0:0:0,-40.338,-420.373	0/1:53:35,18:35:1239:18:644:-42.336,0,-95.8587	0/0:42:42,0:42:1479:0:0:0,-12.6433,-133.405	0/1:76:48,27:48:1681:27:960:-63.8853,0,-128.744	0/1:73:26,47:26:915:47:1684:-129.872,0,-60.6908	0/1:51:29,22:29:1014:22:779:-55.0795,0,-76.2174	0/0:47:47,0:47:1630:0:0:0,-14.1484,-146.985	0/1:46:26,19:26:916:19:665:-46.2671,0,-68.8488	0/1:17:10,7:10:357:7:252:-17.9068,0,-27.3546	0/0:124:124,0:124:4348:0:0:0,-37.3277,-391.503	0/1:50:21,29:21:746:29:1040:-78.8629,0,-52.4134	0/0:254:253,0:253:8923:0:0:0,-76.1606,-802.703	0/0:87:87,0:87:3066:0:0:0,-26.1896,-276.041	0/1:109:61,48:61:2155:48:1699:-120.383,0,-161.405	0/0:47:47,0:47:1663:0:0:0,-14.1484,-149.957	0/0:19:19,0:19:669:0:0:0,-5.71957,-60.5354	0/0:47:47,0:47:1675:0:0:0,-14.1484,-151.037	0/0:71:70,0:70:2474:0:0:0,-21.0721,-222.553	0/0:145:145,0:145:5109:0:0:0,-43.6493,-459.959	0/0:58:56,0:56:1942:0:0:0,-16.8577,-174.323	0/1:84:44,40:44:1562:40:1428:-103.531,0,-115.586	0/1:51:29,22:29:997:22:775:-54.7187,0,-74.6848	0/1:124:70,54:70:2485:54:1904:-134.307,0,-186.576	0/0:27:27,0:27:952:0:0:0,-8.12781,-85.995	0/0:55:55,0:55:1947:0:0:0,-16.5566,-175.506	0/0:71:71,0:71:2493:0:0:0,-21.3731,-224.623	0/1:90:57,33:57:2012:33:1166:-78.1529,0,-154.26	0/1:115:53,62:53:1873:62:2201:-163.735,0,-134.23	0/1:46:17,29:17:595:29:1044:-80.4274,0,-40.0294	0/0:60:60,0:60:2123:0:0:0,-18.0618,-191.338	0/0:86:86,0:86:3056:0:0:0,-25.8886,-275.27
chr07	20027783	.	TCG	CCT,TCT	339502	PASS	AB=0.546046,0.451517;ABP=138.992,153.771;AC=140,48;AF=0.744681,0.255319;AN=188;AO=12645,3352;CIGAR=1X1M1X,2M1X;DP=16045;DPB=16046;DPRA=0,1.14571;EPP=27461.3,7281.79;EPPR=7.35324;GTI=3;LEN=3,1;MEANALT=2.04255,2.44828;MQM=59.9604,59.9284;MQMR=60;NS=94;NUMALT=2;ODDS=0.614409;PAIRED=0,0;PAIREDR=0;PAO=1.5,1.5;PQA=54,54;PQR=0;PRO=0;QA=444268,119771;QR=72;RO=2;RPL=0,0;RPP=27461.3,7281.79;RPPR=3.0103;RPR=12645,3352;RUN=1,1;SAF=0,0;SAP=27461.3,7281.79;SAR=12645,3352;SRF=1;SRP=3.0103;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:35:0,16,16:0:0:16,16:565,576:-93.0326,-47.0213,-42.2048,-46.0368,0,-41.2203	1/2:303:0,172,130:0:0:172,130:6009,4628:-865.781,-376.986,-325.209,-488.788,0,-449.654	1/2:200:0,125,75:0:0:125,75:4371,2671:-573.64,-218.058,-180.43,-355.935,0,-333.358	1/2:393:0,226,167:0:0:226,167:7952,5964:-1133.76,-486.439,-418.406,-647.675,0,-597.403	1/1:120:0,119,0:0:0:119,0:4182,0:-376.31,-35.8226,0,-376.31,-35.8226,-376.31	1/1:74:0,73,0:0:0:73,0:2560,0:-230.291,-21.9752,0,-230.291,-21.9752,-230.291	1/1:211:0,211,0:0:0:211,0:7400,0:-666.059,-63.5173,0,-666.059,-63.5173,-666.059	1/1:308:0,308,0:0:0:308,0:10827,0:-974.352,-92.7172,0,-974.352,-92.7172,-974.352	1/1:102:0,102,0:0:0:102,0:3608,0:-324.928,-30.7051,0,-324.928,-30.7051,-324.928	1/2:178:0,104,73:0:0:104,73:3660,2607:-510.487,-212.543,-181.236,-297.939,0,-275.964	1/1:129:0,129,0:0:0:129,0:4563,0:-410.835,-38.8329,0,-410.835,-38.8329,-410.835	1/2:73:1,30,42:1:36:30,42:1030,1504:-203.038,-119.714,-113.621,-80.6769,0,-70.9716	1/2:91:0,46,45:0:0:46,45:1605,1602:-261.404,-130.923,-117.076,-130.834,0,-117.287	1/2:131:0,72,59:0:0:72,59:2534,2104:-378.148,-171.864,-150.19,-206.639,0,-188.878	1/2:68:0,30,38:0:0:30,38:1070,1356:-198.126,-110.901,-101.87,-87.5809,0,-76.1418	1/1:72:0,72,0:0:0:72,0:2540,0:-228.852,-21.6742,0,-228.852,-21.6742,-228.852	1/1:100:0,100,0:0:0:100,0:3519,0:-316.92,-30.103,0,-316.92,-30.103,-316.92	1/1:91:0,91,0:0:0:91,0:3197,0:-287.958,-27.3937,0,-287.958,-27.3937,-287.958	1/2:74:0,32,41:0:0:32,41:1128,1463:-210.953,-119.112,-109.479,-91.8739,0,-79.5316	1/2:493:0,257,234:0:0:257,234:9012,8396:-1418.27,-684.915,-607.551,-733.427,0,-662.986	1/1:269:0,267,0:0:0:267,0:9349,0:-841.029,-80.375,0,-841.029,-80.375,-841.029	1/1:149:0,149,0:0:0:149,0:5211,0:-469.134,-44.8535,0,-469.134,-44.8535,-469.134	1/1:62:0,59,1:0:0:59,1:2105,36:-189.412,-17.7608,0,-186.475,-14.7948,-186.174	1/1:231:0,228,1:0:0:228,1:7974,36:-717.336,-68.6348,0,-714.398,-65.6974,-714.097	1/2:103:0,51,52:0:0:51,52:1810,1856:-299.14,-151.666,-136.313,-147.83,0,-132.176	1/2:569:0,275,294:0:0:275,294:9632,10524:-1642.28,-858.561,-775.778,-784.069,0,-695.566	1/1:483:0,482,0:0:0:482,0:16892,0:-1519.61,-145.096,0,-1519.61,-145.096,-1519.61	1/1:34:0,34,0:0:0:34,0:1177,0:-106.231,-10.235,0,-106.231,-10.235,-106.231	1/2:483:0,285,197:0:0:285,197:9997,7064:-1389.68,-576.154,-490.36,-813.522,0,-754.219	1/2:250:0,162,88:0:0:162,88:5668,3144:-717.822,-256.695,-207.929,-461.481,0,-434.99	1/1:189:0,189,0:0:0:189,0:6632,0:-596.774,-56.8947,0,-596.774,-56.8947,-596.774	1/2:9:0,5,4:0:0:5,4:180,144:-26.7966,-12.1095,-10.6043,-15.0469,0,-13.8428	1/1:14:0,14,0:0:0:14,0:472,0:-42.7994,-4.21442,0,-42.7994,-4.21442,-42.7994	1/1:6:0,6,0:0:0:6,0:198,0:-18.1428,-1.80618,0,-18.1428,-1.80618,-18.1428	1/2:18:0,10,8:0:0:10,8:356,280:-52.1464,-23.1277,-20.1174,-29.3712,0,-26.9629	1/2:23:0,10,13:0:0:10,13:355,464:-67.1085,-38.1841,-35.1738,-29.2801,0,-25.3667	1/1:223:0,222,0:0:0:222,0:7863,0:-707.372,-66.8287,0,-707.372,-66.8287,-707.372	1/2:229:0,109,120:0:0:109,120:3822,4312:-663.143,-352.131,-319.319,-311.367,0,-275.243	1/2:128:0,68,60:0:0:68,60:2397,2135:-369.519,-174.356,-153.886,-195.517,0,-177.455	1/2:6:0,3,3:0:0:3,3:108,108:-17.9843,-9.17208,-8.26899,-9.17208,0,-8.26899	1/2:289:0,193,96:0:0:193,96:6837,3414:-835.52,-278.574,-220.476,-557.3,0,-528.401	1/2:53:0,24,29:0:0:24,29:841,1040:-153.423,-84.9933,-77.7686,-68.7837,0,-60.0538	1/2:358:0,216,140:0:0:216,140:7553,4995:-1021.17,-407.154,-342.132,-613.976,0,-571.831	1/2:74:0,39,35:0:0:39,35:1379,1239:-213.457,-101.278,-89.5374,-112.533,0,-101.997	1/2:86:0,39,47:0:0:39,47:1387,1672:-249.65,-136.617,-124.876,-113.389,0,-99.2401	1/1:133:0,133,0:0:0:133,0:4663,0:-419.828,-40.037,0,-419.828,-40.037,-419.828	1/1:245:0,244,0:0:0:244,0:8591,0:-772.837,-73.4513,0,-772.837,-73.4513,-772.837	1/2:284:0,148,136:0:0:148,136:5212,4850:-820.031,-395.714,-351.161,-424.672,0,-383.732	1/1:180:0,178,0:0:0:178,0:6275,0:-564.577,-53.5833,0,-564.577,-53.5833,-564.577	1/1:385:0,380,2:0:0:380,2:13441,72:-1209.14,-114.391,0,-1203.26,-108.517,-1202.66	1/1:274:0,273,0:0:0:273,0:9599,0:-863.674,-82.1812,0,-863.674,-82.1812,-863.674	1/2:8:0,7,1:0:0:7,1:252,36:-23.8592,-3.29724,-1.19003,-20.9217,0,-20.6207	1/2:287:0,167,118:0:0:167,118:5915,4223:-826.182,-344.349,-294.077,-481.809,0,-446.287	1/1:142:0,141,0:0:0:141,0:4930,0:-443.577,-42.4452,0,-443.577,-42.4452,-443.577	1/2:24:0,16,8:0:0:16,8:566,288:-69.9565,-23.8592,-19.0427,-46.4551,0,-44.0468	1/2:230:0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chr07	20027811	.	A	C	54856.3	PASS	AB=0.451644;ABP=152.537;AC=48;AF=0.255319;AN=188;AO=3338;CIGAR=1X;DP=16031;DPB=16031;DPRA=1.04325;EPP=7104.48;EPPR=26114.7;GTI=3;LEN=1;MEANALT=1.03636;MQM=59.9326;MQMR=59.9657;NS=94;NUMALT=1;ODDS=0.17296;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=119373;QR=454784;RO=12688;RPL=3321;RPP=7104.48;RPPR=26114.7;RPR=17;RUN=1;SAF=0;SAP=7251.39;SAR=3338;SRF=0;SRP=27554.7;SRR=12688;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:34:18,16:18:648:16:559:-40.4014,0,-48.4169	0/1:296:168,128:168:6028:128:4563:-321.528,0,-453.518	0/1:200:124,76:124:4430:76:2732:-185.916,0,-338.657	0/1:396:229,167:229:8196:167:5948:-416.212,0,-618.43	0/0:119:119,0:119:4280:0:0:0,-35.8226,-385.37	0/0:73:73,0:73:2598:0:0:0,-21.9752,-234.068	0/0:213:213,0:213:7622:0:0:0,-64.1194,-686.016	0/0:305:305,0:305:10917:0:0:0,-91.8141,-982.391	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.247	0/1:174:103,71:103:3682:71:2536:-176.112,0,-279.201	0/0:133:133,0:133:4780:0:0:0,-40.037,-430.348	0/1:75:31,44:31:1104:44:1567:-118.744,0,-77.0934	0/1:87:45,42:45:1607:42:1507:-109.735,0,-118.46	0/1:129:73,56:73:2620:56:2000:-141.441,0,-197.214	0/1:68:29,39:29:1044:39:1400:-105.829,0,-73.8048	0/0:71:71,0:71:2552:0:0:0,-21.3731,-229.93	0/0:98:98,0:98:3519:0:0:0,-29.5009,-316.89	0/0:90:90,0:90:3221:0:0:0,-27.0927,-290.11	0/1:74:33,41:33:1166:41:1472:-110.5,0,-82.9694	0/1:494:258,236:258:9230:236:8420:-609.091,0,-681.96	0/0:266:266,0:266:9540:0:0:0,-80.074,-858.475	0/0:151:151,0:151:5386:0:0:0,-45.4555,-484.872	0/0:62:61,1:61:2184:1:36:0,-15.0656,-193.182	0/0:231:231,0:231:8292:0:0:0,-69.5379,-746.281	0/1:103:48,55:48:1724:55:1980:-147.468,0,-124.439	0/1:567:277,289:277:9939:289:10372:-762.648,0,-723.703	0/0:482:482,0:482:17278:0:0:0,-145.096,-1554.64	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/1:482:286,196:286:10268:196:7023:-487.032,0,-778.928	0/1:248:159,89:159:5700:89:3192:-212.848,0,-438.462	0/0:191:191,0:191:6840:0:0:0,-57.4967,-615.479	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:17:10,6:10:356:6:216:-14.7426,0,-27.3415	0/1:22:9,13:9:324:13:464:-35.4748,0,-22.8832	0/0:225:225,0:225:8080:0:0:0,-67.7317,-727.207	0/1:227:108,119:108:3864:119:4255:-314.795,0,-279.622	0/1:127:68,59:68:2439:59:2105:-151.487,0,-181.533	0/1:6:3,3:3:108:3:104:-7.89663,0,-8.26899	0/1:285:189,96:189:6780:96:3444:-224.377,0,-524.47	0/1:54:24,30:24:864:30:1060:-79.4075,0,-61.8269	0/1:352:213,139:213:7648:139:4967:-341.207,0,-582.38	0/1:75:39,36:39:1400:36:1290:-93.8265,0,-103.586	0/1:86:40,46:40:1427:46:1648:-122.72,0,-102.838	0/0:134:134,0:134:4792:0:0:0,-40.338,-431.429	0/0:242:241,0:241:8639:0:0:0,-72.5482,-777.142	0/1:284:150,134:150:5375:134:4804:-347.022,0,-398.388	0/0:180:180,0:180:6464:0:0:0,-54.1854,-581.82	0/0:385:384,1:384:13783:1:36:0,-112.298,-1236.64	0/0:276:276,0:276:9878:0:0:0,-83.0843,-888.955	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/1:286:170,116:170:6104:116:4168:-289.206,0,-463.357	0/0:143:143,0:143:5127:0:0:0,-43.0473,-461.571	0/1:24:17,7:17:612:7:248:-15.4395,0,-48.1887	0/1:226:138,88:138:4928:88:3111:-212.182,0,-375.636	0/1:32:17,15:17:612:15:528:-38.2184,0,-45.7805	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:117:117,0:117:4196:0:0:0,-35.2205,-377.821	0/0:155:155,0:155:5572:0:0:0,-46.6596,-501.601	0/1:8:5,3:5:180:3:104:-7.29457,0,-14.1438	0/0:345:344,1:344:12342:1:36:0,-100.257,-1107	0/0:524:519,5:519:18616:5:180:0,-141.188,-1658.43	0/1:119:73,46:73:2624:46:1643:-112.335,0,-200.584	0/0:165:165,0:165:5899:0:0:0,-49.6699,-531.02	0/1:246:139,107:139:4992:107:3829:-270.483,0,-375.373	0/1:219:113,106:113:4056:106:3791:-275.406,0,-299.301	0/1:61:25,36:25:900:36:1275:-96.6894,0,-62.9578	0/0:172:172,0:172:6159:0:0:0,-51.7772,-554.352	0/1:88:54,34:54:1940:34:1220:-83.6129,0,-148.386	0/1:48:26,22:26:936:22:792:-57.1562,0,-70.11	0/0:137:137,0:137:4895:0:0:0,-41.2411,-440.702	0/1:97:51,46:51:1819:46:1656:-120.128,0,-134.791	0/0:407:406,0:406:14514:0:0:0,-122.218,-1305.64	0/0:377:377,0:377:13544:0:0:0,-113.488,-1218.74	0/1:245:136,109:136:4859:109:3871:-274.83,0,-363.712	0/0:216:216,0:216:7741:0:0:0,-65.0225,-696.697	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:255:255,0:255:9132:0:0:0,-76.7626,-821.85	0/0:211:210,1:210:7514:1:36:0,-59.9191,-672.703	0/0:529:526,3:526:18875:3:108:0,-149.17,-1688.23	0/0:139:138,0:138:4948:0:0:0,-41.5421,-445.103	0/1:94:49,45:49:1756:45:1616:-117.297,0,-130.027	0/1:104:61,43:61:2188:43:1535:-107.135,0,-165.879	0/1:165:74,91:74:2656:91:3259:-243.86,0,-189.616	0/0:50:50,0:50:1800:0:0:0,-15.0515,-162.282	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.727	0/0:82:82,0:82:2948:0:0:0,-24.6845,-265.553	0/1:85:47,38:47:1684:38:1360:-97.113,0,-126.259	0/1:160:69,91:69:2476:91:3259:-245.365,0,-174.929	0/1:67:23,44:23:824:44:1580:-122.323,0,-54.3128	0/0:304:304,0:304:10885:0:0:0,-91.5131,-979.477	0/0:126:125,1:125:4475:1:36:0,-34.3315,-399.321
chr07	20109569	.	T	C	18630.6	PASS	AB=0.412646;ABP=144.516;AC=39;AF=0.207447;AN=188;AO=891;CIGAR=1X;DP=4570;DPB=4570;DPRA=1.19903;EPP=12.0788;EPPR=200.881;GTI=0;LEN=1;MEANALT=1;MQM=59.9327;MQMR=59.9796;NS=94;NUMALT=1;ODDS=5.65123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=31727;QR=131267;RO=3679;RPL=1;RPP=1929.12;RPPR=7922.52;RPR=890;RUN=1;SAF=477;SAP=12.6832;SAR=414;SRF=1558;SRP=190.096;SRR=2121;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:16,15:16:568:15:531:-38.79,0,-42.1199	0/1:36:23,13:23:805:13:459:-30.807,0,-61.9304	0/1:27:15,12:15:532:12:423:-30.2773,0,-40.0853	0/1:27:13,14:13:468:14:504:-37.5703,0,-34.3318	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:43:43,0:43:1525:0:0:0,-12.9443,-137.541	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:27:11,16:11:380:16:572:-43.6856,0,-26.4042	0/0:196:196,0:196:7002:0:0:0,-59.0019,-630.244	0/1:77:47,30:47:1688:30:1076:-73.9735,0,-129.028	0/1:83:36,47:36:1292:47:1666:-125.24,0,-91.5983	0/1:70:39,31:39:1396:31:1099:-78.126,0,-104.867	0/1:79:38,41:38:1368:41:1464:-108.275,0,-99.6395	0/0:64:64,0:64:2304:0:0:0,-19.2659,-207.62	0/0:85:85,0:85:3034:0:0:0,-25.5875,-273.289	0/0:61:61,0:61:2175:0:0:0,-18.3628,-196.016	0/1:49:34,15:34:1216:15:532:-33.4626,0,-94.9961	0/1:32:13,19:13:449:19:676:-51.535,0,-31.1045	0/0:47:45,2:45:1620:2:72:0,-7.31169,-139.253	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:19:19,0:19:661:0:0:0,-5.71957,-59.8116	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/1:24:10,14:10:360:14:491:-37.2964,0,-25.5196	0/1:60:29,31:29:1028:31:1099:-81.1577,0,-74.7712	0/0:42:42,0:42:1487:0:0:0,-12.6433,-134.124	0/0:40:40,0:40:1440:0:0:0,-12.0412,-129.862	0/1:35:15,20:15:536:20:711:-53.7796,0,-38.0388	0/1:17:9,8:9:324:8:275:-19.966,0,-24.3883	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.7455	0/0:37:37,0:37:1312:0:0:0,-11.1381,-118.382	0/0:72:72,0:72:2572:0:0:0,-21.6742,-231.73	0/0:15:15,0:15:531:0:0:0,-4.51545,-48.1219	0/0:36:36,0:36:1268:0:0:0,-10.8371,-114.412	0/0:32:32,0:32:1135:0:0:0,-9.63296,-102.458	0/0:178:178,0:178:6367:0:0:0,-53.5833,-573.12	0/1:12:6,6:6:201:6:212:-15.8124,0,-14.8047	0/1:124:100,24:100:3576:24:860:-40.3941,0,-284.72	0/0:20:19,1:19:676:1:36:0,-2.42232,-57.5697	0/1:30:11,19:11:387:19:684:-52.8579,0,-26.135	0/1:79:67,12:67:2408:12:428:-15.0774,0,-193.195	0/1:37:18,19:18:640:19:676:-50.0299,0,-46.7912	0/1:68:34,34:34:1220:34:1220:-89.6368,0,-89.6368	0/1:66:35,31:35:1232:31:1103:-79.7118,0,-91.3133	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:35:16,19:16:576:19:680:-50.9931,0,-41.6389	0/0:28:28,0:28:972:0:0:0,-8.42884,-87.7892	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.909	0/0:16:16,0:16:557:0:0:0,-4.81648,-50.4556	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/1:36:12,24:12:428:24:841:-65.1693,0,-28.0217	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:19:18,1:18:640:1:36:0,-2.12129,-54.331	0/1:26:15,11:15:532:11:388:-27.4306,0,-40.3863	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:23:22,1:22:788:1:36:0,-3.32541,-67.6465	0/0:104:103,1:103:3671:1:32:0,-28.1078,-327.395	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:96:96,0:96:3448:0:0:0,-28.8989,-310.532	0/0:23:23,0:23:816:0:0:0,-6.92369,-73.7617	0/0:55:55,0:55:1965:0:0:0,-16.5566,-177.123	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/1:22:8,14:8:288:14:500:-38.7053,0,-19.6447	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:42:16,26:16:572:26:932:-71.5556,0,-39.1702	0/1:24:8,16:8:288:16:572:-44.5887,0,-19.0427	0/1:82:72,10:72:2579:10:351:-7.24222,0,-207.674	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/1:95:47,48:47:1684:48:1720:-126.488,0,-123.059	0/0:47:43,4:43:1540:4:144:0,-0.834792,-125.579	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:26:12,14:12:417:14:472:-34.9732,0,-30.0334	0/0:30:30,0:30:1061:0:0:0,-9.0309,-95.7887	0/0:36:36,0:36:1273:0:0:0,-10.8371,-114.871	0/1:19:12,7:12:432:7:252:-17.3094,0,-33.5016	0/0:21:21,0:21:744:0:0:0,-6.32163,-67.2843	0/0:97:97,0:97:3435:0:0:0,-29.1999,-309.363	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/0:80:80,0:80:2859:0:0:0,-24.0824,-257.547	0/1:59:23,36:23:815:36:1288:-98.4628,0,-55.91	0/1:87:53,34:53:1891:34:1211:-83.1002,0,-144.278	0/1:113:56,57:56:2000:57:2032:-148.946,0,-146.257	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/1:142:118,24:118:4196:24:855:-34.5239,0,-335.075	0/1:172:144,28:144:5123:28:1008:-39.2592,0,-409.436	0/1:60:20,40:20:720:40:1436:-111.476,0,-47.067	0/0:95:95,0:95:3363:0:0:0,-28.5978,-302.884	0/0:124:124,0:124:4443:0:0:0,-37.3277,-400.04
chr07	20332946	.	T	C	33463	PASS	AB=0.487186;ABP=8.96508;AC=48;AF=0.255319;AN=188;AO=2057;CIGAR=1X;DP=8520;DPB=8520;DPRA=1.02899;EPP=4469.73;EPPR=14035.1;GTI=1;LEN=1;MEANALT=1.01613;MQM=59.9781;MQMR=59.9418;NS=94;NUMALT=1;ODDS=2.28843;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72951;QR=230416;RO=6462;RPL=2056;RPP=4461.05;RPPR=13870.5;RPR=1;RUN=1;SAF=2056;SAP=4461.05;SAR=1;SRF=6443;SRP=13870.5;SRR=19;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:13,14:13:464:14:504:-37.5703,0,-33.9697	0/1:82:36,46:36:1292:46:1634:-122.663,0,-91.8993	0/1:176:104,72:104:3723:72:2546:-176.408,0,-282.289	0/1:203:101,102:101:3613:102:3604:-263.456,0,-263.328	0/0:18:16,2:16:572:2:57:0,-0.00523009,-46.4001	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.422	0/0:66:66,0:66:2341:0:0:0,-19.868,-210.948	0/0:150:150,0:150:5336:0:0:0,-45.1545,-480.375	0/0:89:89,0:89:3130:0:0:0,-26.7917,-281.926	0/1:74:42,32:42:1500:32:1108:-77.7455,0,-113.018	0/0:61:61,0:61:2166:0:0:0,-18.3628,-195.206	0/1:99:42,57:42:1495:57:2021:-152.361,0,-105.042	0/1:83:30,53:30:1076:53:1877:-144.222,0,-72.1674	0/1:108:51,57:51:1816:57:2040:-151.361,0,-131.21	0/1:72:26,46:26:924:46:1648:-126.934,0,-61.8035	0/0:85:85,0:85:3022:0:0:0,-25.5875,-272.211	0/0:49:49,0:49:1745:0:0:0,-14.7505,-157.332	0/0:43:43,0:43:1516:0:0:0,-12.9443,-136.73	0/1:44:23,21:23:803:21:756:-55.1219,0,-59.343	0/1:84:37,47:37:1319:47:1651:-123.587,0,-93.7246	0/0:102:102,0:102:3647:0:0:0,-30.7051,-328.434	0/0:75:74,1:74:2641:1:36:0,-18.979,-234.337	0/0:91:91,0:91:3250:0:0:0,-27.3937,-292.72	0/0:55:53,2:53:1887:2:72:0,-9.71993,-162.695	0/1:37:18,19:18:644:19:680:-50.3911,0,-47.1525	0/1:262:131,131:131:4699:131:4630:-337.938,0,-344.199	0/0:172:171,1:171:6116:1:36:0,-48.1789,-546.811	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.0689	0/1:296:161,135:161:5775:135:4805:-343.502,0,-430.758	0/1:150:98,52:98:3466:52:1814:-118.383,0,-266.997	0/0:95:94,1:94:3358:1:36:0,-24.9996,-298.837	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/0:31:31,0:31:1097:0:0:0,-9.33193,-99.038	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/0:184:184,0:184:6520:0:0:0,-55.3895,-586.887	0/1:126:68,58:68:2436:58:2063:-148.011,0,-181.566	0/1:57:27,30:27:968:30:1062:-78.7136,0,-70.2787	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:101:50,51:50:1783:51:1832:-134.757,0,-130.348	0/1:47:19,28:19:675:28:1004:-76.5275,0,-46.9285	0/1:105:74,31:74:2639:31:1108:-68.4228,0,-206.149	0/1:44:25,19:25:900:19:680:-48.2838,0,-68.0757	0/1:50:27,23:27:972:23:824:-59.4318,0,-72.7464	0/0:74:74,0:74:2625:0:0:0,-22.2762,-236.497	0/0:85:85,0:85:3027:0:0:0,-25.5875,-272.661	0/1:193:115,78:115:4107:78:2723:-187.211,0,-311.717	0/0:95:94,1:94:3369:1:36:0,-24.9996,-299.739	0/0:148:148,0:148:5304:0:0:0,-44.5524,-477.408	0/0:86:86,0:86:3071:0:0:0,-25.8886,-276.618	0/1:26:13,13:13:444:13:468:-34.6329,0,-32.3705	0/1:118:75,43:75:2679:43:1531:-102.561,0,-205.833	0/0:104:103,1:103:3675:1:36:0,-27.7088,-327.355	0/1:16:9,7:9:315:7:228:-16.0211,0,-23.8707	0/1:153:86,67:86:3063:67:2362:-166.778,0,-229.842	0/1:27:14,13:14:496:13:468:-34.3318,0,-36.8465	0/1:19:11,8:11:396:8:279:-19.728,0,-30.2632	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:103:102,1:102:3644:1:36:0,-27.4078,-324.562	0/0:85:84,1:84:2999:1:36:0,-21.9893,-266.543	0/1:13:5,8:5:180:8:288:-22.354,0,-12.6387	0/0:204:202,2:202:7240:2:68:0,-54.9524,-644.705	0/0:206:204,2:204:7284:2:72:0,-55.1755,-648.775	0/1:141:76,65:76:2713:65:2316:-166.253,0,-201.967	0/0:99:99,0:99:3522:0:0:0,-29.802,-315.915	0/1:84:42,42:42:1489:42:1493:-109.376,0,-108.93	0/1:150:38,112:38:1356:112:4011:-316.024,0,-77.186	0/1:56:25,31:25:900:31:1104:-82.813,0,-64.4633	0/0:70:65,5:65:2291:5:180:0,-4.52003,-189.897	0/1:43:24,19:24:864:19:665:-47.2285,0,-65.1383	0/1:23:15,8:15:536:8:284:-18.9797,0,-41.6511	0/0:120:120,0:120:4285:0:0:0,-36.1236,-385.827	0/1:74:47,26:47:1688:26:928:-61.638,0,-130.009	0/0:174:174,0:174:6166:0:0:0,-52.3792,-555.04	0/0:231:231,0:231:8237:0:0:0,-69.5379,-741.339	0/1:93:57,36:57:2044:36:1265:-86.1548,0,-156.236	0/0:213:213,0:213:7604:0:0:0,-64.1194,-684.398	0/0:26:26,0:26:909:0:0:0,-7.82678,-82.1234	0/0:111:111,0:111:3967:0:0:0,-33.4143,-357.221	0/0:154:153,1:153:5458:1:36:0,-42.7603,-487.748	0/0:129:129,0:129:4599:0:0:0,-38.8329,-413.99	0/0:58:58,0:58:2059:0:0:0,-17.4597,-185.581	0/1:107:54,53:54:1927:53:1886:-137.807,0,-141.496	0/1:52:26,26:26:915:26:913:-66.8304,0,-67.012	0/1:105:53,52:53:1878:52:1830:-133.371,0,-137.689	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:58:58,0:58:2076:0:0:0,-17.4597,-187.111	0/0:80:80,0:80:2829:0:0:0,-24.0824,-254.849	0/1:80:38,42:38:1355:42:1499:-111.121,0,-98.1673	0/1:154:69,85:69:2471:85:3010:-224.771,0,-176.025	0/1:82:22,60:22:792:60:2124:-166.742,0,-46.9212	0/0:63:61,2:61:2152:2:72:0,-12.1282,-187.109	0/0:81:81,0:81:2895:0:0:0,-24.3834,-260.786
chr07	20359074	.	A	G	56278.6	PASS	AB=0.470775;ABP=56.8259;AC=48;AF=0.255319;AN=188;AO=3433;CIGAR=1X;DP=15654;DPB=15654;DPRA=1.01946;EPP=7457.68;EPPR=26534.1;GTI=1;LEN=1;MEANALT=1.03448;MQM=59.5753;MQMR=59.989;NS=94;NUMALT=1;ODDS=3.49306;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122634;QR=435398;RO=12218;RPL=0;RPP=7457.68;RPPR=26534.1;RPR=3433;RUN=1;SAF=3433;SAP=7457.68;SAR=0;SRF=12218;SRP=26534.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:93:53,40:53:1873:40:1399:-97.9883,0,-140.851	0/1:179:79,100:79:2809:100:3556:-266.089,0,-199.165	0/1:397:214,183:214:7653:183:6532:-468.079,0,-569.296	0/1:415:187,228:187:6689:228:8158:-608.803,0,-477.158	0/0:115:113,2:113:4017:2:68:0,-28.1607,-355.262	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.759	0/0:151:151,0:151:5380:0:0:0,-45.4555,-484.335	0/0:294:294,0:294:10481:0:0:0,-88.5028,-943.211	0/0:200:200,0:200:7065:0:0:0,-60.206,-635.913	0/1:87:41,46:41:1468:46:1607:-118.721,0,-106.226	0/0:62:62,0:62:2220:0:0:0,-18.6639,-200.064	0/1:85:43,42:43:1548:42:1504:-109.931,0,-114.026	0/1:109:64,45:64:2292:45:1616:-112.768,0,-173.729	0/1:61:19,42:19:680:42:1500:-116.916,0,-43.1663	0/1:116:66,50:66:2368:50:1796:-126.991,0,-178.459	0/0:96:95,0:95:3404:0:0:0,-28.5978,-306.215	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.37	0/1:29:15,14:15:536:14:496:-36.2444,0,-39.8449	0/1:402:253,149:253:9030:149:5323:-358.183,0,-691.664	0/0:273:273,0:273:9711:0:0:0,-82.1812,-873.898	0/0:289:289,0:289:10255:0:0:0,-86.9977,-922.884	0/0:304:302,2:302:10733:2:72:0,-84.6764,-959.042	0/0:72:72,0:72:2561:0:0:0,-21.6742,-230.739	0/1:136:75,61:75:2664:61:2192:-156.596,0,-199.067	0/1:447:258,189:258:9202:189:6742:-472.284,0,-693.592	0/0:383:383,0:383:13591:0:0:0,-115.294,-1222.98	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/1:502:263,239:263:9359:239:8566:-619.776,0,-691.16	0/1:287:165,122:165:5896:122:4335:-303.855,0,-444.356	0/0:198:197,1:197:7017:1:36:0,-56.0057,-627.997	0/1:23:8,15:8:273:15:540:-42.0082,0,-17.9765	0/0:18:17,1:17:600:1:36:0,-1.82026,-50.7309	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	0/1:33:25,8:25:896:8:288:-16.3325,0,-71.0264	0/0:201:201,0:201:7193:0:0:0,-60.507,-647.424	0/1:205:116,88:116:4140:88:3156:-222.415,0,-311.015	0/1:43:20,23:20:716:23:824:-61.5372,0,-51.8234	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:266:173,93:173:6192:93:3344:-221.093,0,-477.304	0/1:29:12,17:12:417:17:612:-46.6136,0,-29.1303	0/1:353:199,154:199:7105:154:5468:-385.922,0,-533.243	0/1:78:33,45:33:1180:45:1612:-121.89,0,-83.0277	0/1:73:38,35:38:1364:35:1260:-91.7303,0,-101.086	0/0:181:181,0:181:6476:0:0:0,-54.4864,-582.926	0/0:290:290,0:290:10374:0:0:0,-87.2987,-933.574	0/1:375:194,181:194:6871:181:6458:-468.367,0,-505.577	0/0:162:162,0:162:5733:0:0:0,-48.7669,-515.464	0/0:198:198,0:198:6994:0:0:0,-59.6039,-629.525	0/0:233:233,0:233:8297:0:0:0,-70.14,-746.743	0/1:18:6,12:6:216:12:432:-33.8003,0,-14.372	0/1:310:173,137:173:6156:137:4904:-347.934,0,-460.817	0/0:199:199,0:199:7045:0:0:0,-59.905,-634.113	0/1:17:11,6:11:396:6:212:-14.2608,0,-30.8652	0/1:271:152,119:152:5444:119:4258:-301.303,0,-408.509	0/1:94:59,35:59:2104:35:1248:-84.3257,0,-161.333	0/1:29:21,7:21:733:7:252:-14.2403,0,-57.5015	0/0:27:27,0:27:957:0:0:0,-8.12781,-86.4439	0/0:134:134,0:134:4808:0:0:0,-40.338,-432.874	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.972	0/1:10:5,5:5:180:5:176:-13.0835,0,-13.5418	0/0:470:470,0:470:16755:0:0:0,-141.484,-1507.61	0/0:360:356,4:356:12710:4:144:0,-95.0572,-1130.4	0/1:109:72,37:72:2576:37:1324:-86.6465,0,-199.277	0/0:250:249,1:249:8874:1:32:0,-72.0582,-795.446	0/1:317:188,129:188:6662:129:4612:-319.777,0,-504.237	0/1:238:68,170:68:2436:170:6097:-477.152,0,-147.85	0/1:43:22,21:22:788:21:756:-55.4183,0,-58.3005	0/0:127:127,0:127:4556:0:0:0,-38.2308,-410.205	0/1:39:17,22:17:608:22:777:-58.5102,0,-43.3119	0/1:36:13,23:13:464:23:820:-63.2831,0,-31.2604	0/0:204:204,0:204:7285:0:0:0,-61.4101,-655.702	0/1:181:105,76:105:3713:76:2713:-189.81,0,-279.888	0/0:222:222,0:222:7881:0:0:0,-66.8287,-709.324	0/0:454:454,0:454:16273:0:0:0,-136.668,-1464.24	0/1:203:86,117:86:3045:117:4180:-314.63,0,-213.171	0/0:201:199,2:199:7089:2:72:0,-53.7176,-631.283	0/0:49:49,0:49:1752:0:0:0,-14.7505,-157.964	0/0:279:278,1:278:9902:1:36:0,-80.3891,-887.527	0/0:283:283,0:283:10073:0:0:0,-85.1915,-906.482	0/0:454:451,3:451:15983:3:93:0,-127.991,-1429.49	0/0:55:55,0:55:1964:0:0:0,-16.5566,-177.035	0/1:94:42,52:42:1508:52:1860:-139.371,0,-107.718	0/1:66:31,35:31:1116:35:1240:-92.0304,0,-80.8837	0/1:138:60,78:60:2144:78:2777:-208.618,0,-151.686	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:90:90,0:90:3205:0:0:0,-27.0927,-288.672	0/0:97:97,0:97:3465:0:0:0,-29.1999,-312.058	0/1:44:21,23:21:741:23:828:-61.5988,0,-53.7663	0/1:77:34,43:34:1209:43:1539:-115.614,0,-85.9348	0/1:78:29,49:29:1032:49:1760:-135.19,0,-69.7131	0/0:297:296,1:296:10566:1:36:0,-85.8076,-947.199	0/0:112:112,0:112:4001:0:0:0,-33.7154,-360.278
chr07	20359092	.	A	G	56039.5	PASS	AB=0.47561;ABP=39.8724;AC=48;AF=0.255319;AN=188;AO=3419;CIGAR=1X;DP=15359;DPB=15359;DPRA=1.15591;EPP=7427.27;EPPR=25291.5;GTI=1;LEN=1;MEANALT=1.04762;MQM=59.5724;MQMR=59.9856;NS=94;NUMALT=1;ODDS=3.66976;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122008;QR=427042;RO=11936;RPL=0;RPP=7427.27;RPPR=25300.1;RPR=3419;RUN=1;SAF=3419;SAP=7427.27;SAR=0;SRF=11935;SRP=25913;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:89:51,38:51:1820:38:1364:-96.1077,0,-137.29	0/1:180:81,99:81:2886:99:3548:-265.064,0,-205.79	0/1:381:204,177:204:7280:177:6302:-452.205,0,-540.562	0/1:416:180,236:180:6440:236:8432:-633.148,0,-454.459	0/0:118:116,2:116:4139:2:72:0,-28.6848,-365.835	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.759	0/0:149:149,0:149:5336:0:0:0,-44.8535,-480.373	0/0:287:287,0:287:10280:0:0:0,-86.3956,-925.124	0/0:196:196,0:196:7013:0:0:0,-59.0019,-631.23	0/1:85:39,46:39:1396:46:1631:-121.488,0,-100.352	0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.705	0/1:84:43,41:43:1548:41:1468:-107.054,0,-114.327	0/1:105:62,43:62:2215:43:1536:-106.801,0,-168.006	0/1:59:17,42:17:612:42:1500:-117.515,0,-37.6527	0/1:114:63,50:63:2244:50:1800:-127.878,0,-167.848	0/0:95:95,0:95:3395:0:0:0,-28.5978,-305.765	0/0:45:44,1:44:1580:1:36:0,-9.94807,-138.893	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/1:28:14,14:14:500:14:504:-37.2693,0,-36.9073	0/1:391:248,143:248:8872:143:5111:-342.42,0,-680.763	0/0:268:268,0:268:9603:0:0:0,-80.676,-864.203	0/0:283:283,0:283:10128:0:0:0,-85.1915,-910.676	0/0:296:294,2:294:10528:2:72:0,-82.2682,-940.595	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/1:135:73,62:73:2608:62:2208:-158.337,0,-194.329	0/1:447:259,188:259:9244:188:6694:-467.966,0,-697.37	0/0:373:373,0:373:13367:0:0:0,-112.284,-1202.82	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/1:496:262,234:262:9384:234:8352:-602.371,0,-695.212	0/1:275:154,121:154:5520:121:4327:-306.748,0,-414.142	0/0:196:195,1:195:6996:1:36:0,-55.4036,-626.103	0/1:24:8,16:8:284:16:568:-44.2207,0,-18.6786	0/0:17:16,1:16:576:1:36:0,-1.51923,-48.5767	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:13:5,8:5:172:8:284:-21.99,0,-11.9046	0/1:31:24,7:24:856:7:252:-13.697,0,-68.0292	0/0:200:200,0:200:7168:0:0:0,-60.206,-645.175	0/1:202:113,88:113:4040:88:3129:-220.893,0,-302.922	0/1:42:19,23:19:684:23:828:-62.1976,0,-49.2471	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:263:171,92:171:6108:92:3296:-217.679,0,-470.652	0/1:28:11,17:11:396:17:595:-45.4383,0,-27.5539	0/1:348:192,156:192:6868:156:5520:-392.095,0,-513.431	0/1:76:32,44:32:1139:44:1584:-119.973,0,-79.9397	0/1:71:37,34:37:1324:34:1216:-88.3734,0,-98.089	0/0:178:178,0:178:6380:0:0:0,-53.5833,-574.288	0/0:283:283,0:283:10104:0:0:0,-85.1915,-909.295	0/1:366:183,183:183:6560:183:6529:-477.468,0,-480.304	0/0:160:160,0:160:5716:0:0:0,-48.1648,-513.933	0/0:190:190,0:190:6836:0:0:0,-57.1957,-615.306	0/0:227:226,1:226:8104:1:36:0,-64.7355,-725.777	0/1:18:6,12:6:212:12:432:-33.8003,0,-14.0063	0/1:300:166,134:166:5913:134:4793:-341.078,0,-441.972	0/0:195:195,0:195:6979:0:0:0,-58.7008,-628.174	0/1:18:12,6:12:432:6:216:-14.3254,0,-33.8027	0/1:265:146,119:146:5236:119:4267:-303.627,0,-391.604	0/1:91:58,33:58:2080:33:1184:-79.4722,0,-160.077	0/1:29:22,7:22:792:7:252:-14.2991,0,-62.8758	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:128:128,0:128:4592:0:0:0,-38.5318,-413.444	0/0:69:68,0:68:2444:0:0:0,-20.47,-219.855	0/1:11:6,5:6:216:5:180:-13.2383,0,-16.4792	0/0:459:457,2:457:16326:2:72:0,-131.336,-1462.18	0/0:354:350,4:350:12505:4:144:0,-93.251,-1111.95	0/1:105:69,36:69:2441:36:1284:-84.2471,0,-188.336	0/0:245:244,1:244:8721:1:32:0,-70.553,-781.653	0/1:311:184,127:184:6586:127:4519:-313.219,0,-499.197	0/1:238:67,171:67:2396:171:6095:-476.954,0,-144.252	0/1:42:22,20:22:788:20:720:-52.4809,0,-58.6015	0/0:126:126,0:126:4504:0:0:0,-37.9298,-405.529	0/1:39:17,22:17:604:22:788:-59.5046,0,-42.9504	0/1:37:13,24:13:464:24:841:-64.7825,0,-30.9594	0/0:200:199,1:199:7128:1:36:0,-56.6077,-637.979	0/1:182:106,76:106:3784:76:2703:-188.611,0,-285.972	0/0:216:216,0:216:7719:0:0:0,-65.0225,-694.744	0/0:441:441,0:441:15737:0:0:0,-132.754,-1416.03	0/1:205:87,118:87:3109:118:4217:-317.672,0,-218.324	0/0:195:192,2:192:6896:2:72:0,-51.9694,-613.914	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:277:276,1:276:9896:1:36:0,-79.787,-886.981	0/0:277:275,2:275:9831:2:72:0,-76.5486,-877.87	0/0:445:442,3:442:15809:3:104:0,-124.256,-1412.8	0/0:52:52,0:52:1860:0:0:0,-15.6536,-167.68	0/1:93:41,52:41:1468:52:1859:-139.581,0,-104.42	0/1:66:31,35:31:1097:35:1247:-92.6628,0,-79.17	0/1:137:58,79:58:2080:79:2827:-213.417,0,-146.229	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:88:88,0:88:3156:0:0:0,-26.4906,-284.265	0/0:94:94,0:94:3368:0:0:0,-28.2968,-303.334	0/1:44:21,23:21:756:23:828:-61.5988,0,-55.1219	0/1:75:32,43:32:1152:43:1504:-113.068,0,-81.4129	0/1:75:28,47:28:985:47:1674:-128.357,0,-66.3843	0/0:288:286,2:286:10203:2:72:0,-79.8599,-911.237	0/0:111:111,0:111:3980:0:0:0,-33.4143,-358.39
chr07	20359100	.	G	T	53062.5	PASS	AB=0.468962;ABP=62.3214;AC=48;AF=0.255319;AN=188;AO=3342;CIGAR=1X;DP=15281;DPB=15281;DPRA=1.07024;EPP=7190.75;EPPR=25663.9;GTI=2;LEN=1;MEANALT=1.11667;MQM=59.5745;MQMR=59.9936;NS=94;NUMALT=1;ODDS=1.73527;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117023;QR=425971;RO=11929;RPL=3333;RPP=7182.11;RPPR=25663.9;RPR=9;RUN=1;SAF=3341;SAP=7251.39;SAR=1;SRF=11929;SRP=25906.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:90:52,38:52:1848:38:1323:-92.06,0,-139.507	0/1:180:80,98:80:2838:98:3459:-257.424,0,-201.716	0/1:389:209,180:209:7466:180:6393:-458.061,0,-554.884	0/1:403:183,220:183:6517:220:7681:-570.017,0,-465.299	0/0:112:110,2:110:3924:2:68:0,-27.2576,-346.887	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.165	0/0:147:147,0:147:5240:0:0:0,-44.2514,-471.737	0/0:291:291,0:291:10328:0:0:0,-87.5997,-929.452	0/0:197:197,0:197:7020:0:0:0,-59.3029,-631.863	0/1:86:41,45:41:1464:45:1534:-112.457,0,-106.167	0/0:62:62,0:62:2220:0:0:0,-18.6639,-200.064	0/1:81:41,40:41:1476:40:1424:-103.989,0,-108.753	0/1:105:62,43:62:2219:43:1491:-102.764,0,-168.366	0/1:60:19,41:19:680:41:1419:-109.931,0,-43.4674	0/1:115:66,49:66:2341:49:1721:-120.55,0,-176.33	0/0:97:97,0:97:3473:0:0:0,-29.1999,-312.78	0/0:44:44,0:44:1565:0:0:0,-13.2453,-141.14	0/0:41:41,0:41:1459:0:0:0,-12.3422,-131.605	0/1:28:14,14:14:504:14:491:-36.0923,0,-37.2693	0/1:396:249,147:249:8923:147:5161:-345.418,0,-683.843	0/0:266:265,1:265:9427:1:36:0,-76.4757,-844.793	0/0:280:280,0:280:9976:0:0:0,-84.2884,-897.783	0/0:295:293,2:293:10462:2:68:0,-82.3461,-935.04	0/0:71:71,0:71:2515:0:0:0,-21.3731,-226.603	0/1:133:73,60:73:2580:60:2078:-147.249,0,-192.411	0/1:442:257,185:257:9204:185:6454:-447.875,0,-695.275	0/0:374:374,0:374:13381:0:0:0,-112.585,-1204.08	0/0:37:37,0:37:1317:0:0:0,-11.1381,-118.83	0/1:491:261,229:261:9312:229:7983:-570.64,0,-690.184	0/1:282:161,121:161:5706:121:4270:-299.52,0,-428.771	0/0:195:194,1:194:6940:1:36:0,-55.1026,-621.068	0/1:23:8,15:8:288:15:528:-40.9212,0,-19.3437	0/0:18:17,1:17:604:1:21:0,-3.31859,-52.5907	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	0/1:29:23,6:23:828:6:216:-11.0606,0,-66.1142	0/0:196:195,1:195:6980:1:36:0,-55.4036,-624.663	0/1:203:115,88:115:4082:88:3089:-217.059,0,-306.456	0/1:41:19,22:19:680:22:788:-58.9017,0,-49.1869	0/1:5:3,2:3:104:2:64:-4.57354,0,-8.19766	0/1:260:170,90:170:6068:90:3166:-206.891,0,-467.957	0/1:29:12,17:12:428:17:596:-45.2085,0,-30.1289	0/1:345:195,150:195:6956:150:5241:-367.921,0,-522.251	0/1:75:31,44:31:1116:44:1518:-114.33,0,-78.1744	0/1:72:37,35:37:1319:35:1228:-89.1469,0,-97.337	0/0:180:180,0:180:6428:0:0:0,-54.1854,-578.607	0/0:282:281,1:281:10053:1:36:0,-81.2922,-901.106	0/1:360:184,176:184:6560:176:6166:-446.673,0,-482.112	0/0:159:159,0:159:5672:0:0:0,-47.8638,-510.599	0/0:195:195,0:195:6992:0:0:0,-58.7008,-629.342	0/0:231:231,0:231:8249:0:0:0,-69.5379,-742.422	0/1:18:7,11:7:252:11:379:-29.0211,0,-17.6104	0/1:303:169,133:169:6039:133:4722:-333.618,0,-452.344	0/0:192:192,0:192:6860:0:0:0,-57.7978,-617.471	0/1:18:12,6:12:428:6:194:-12.3521,0,-33.4403	0/1:259:145,114:145:5159:114:4001:-282.304,0,-386.484	0/1:93:58,35:58:2068:35:1209:-81.1127,0,-158.395	0/1:26:19,7:19:680:7:240:-14.1079,0,-53.7024	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:130:130,0:130:4628:0:0:0,-39.1339,-416.683	0/0:70:70,0:70:2520:0:0:0,-21.0721,-227.051	0/1:11:6,5:6:216:5:169:-12.2085,0,-16.4792	0/0:460:459,0:459:16428:0:0:0,-138.173,-1477.83	0/0:347:343,4:343:12275:4:144:0,-91.1438,-1091.28	0/1:100:66,34:66:2360:34:1195:-77.7434,0,-182.556	0/0:240:240,0:240:8573:0:0:0,-72.2472,-771.568	0/1:310:186,123:186:6643:123:4333:-296.733,0,-504.572	0/1:233:67,166:67:2408:166:5798:-451.761,0,-146.836	0/1:42:22,20:22:784:20:720:-52.4809,0,-58.2407	0/0:127:127,0:127:4548:0:0:0,-38.2308,-409.486	0/1:35:15,20:15:540:20:703:-53.0575,0,-38.4005	0/1:34:13,21:13:464:21:723:-55.1416,0,-31.8625	0/0:198:198,0:198:7066:0:0:0,-59.6039,-636.002	0/1:176:102,74:102:3639:74:2608:-181.873,0,-274.734	0/0:213:213,0:213:7620:0:0:0,-64.1194,-685.835	0/0:447:446,0:446:15966:0:0:0,-134.259,-1436.41	0/1:202:85,117:85:3056:117:4066:-305.179,0,-214.46	0/0:196:194,2:194:6949:2:68:0,-52.5914,-619.063	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:269:267,1:267:9546:1:36:0,-77.4376,-855.498	0/0:279:279,0:279:9919:0:0:0,-83.9874,-892.623	0/0:436:434,1:434:15521:1:36:0,-127.71,-1393	0/0:53:53,0:53:1896:0:0:0,-15.9546,-170.918	0/1:95:43,52:43:1544:52:1852:-138.35,0,-110.655	0/1:66:31,34:31:1098:34:1189:-87.3818,0,-79.202	0/1:136:58,78:58:2058:78:2649:-197.705,0,-144.55	0/0:22:22,0:22:783:0:0:0,-6.62266,-70.7929	0/0:84:84,0:84:3016:0:0:0,-25.2865,-271.67	0/0:94:94,0:94:3359:0:0:0,-28.2968,-302.524	0/1:45:21,24:21:752:24:838:-62.1854,0,-54.4599	0/1:75:34,41:34:1216:41:1421:-105.6,0,-87.1693	0/1:74:28,46:28:1008:46:1623:-124.073,0,-68.7601	0/0:291:290,1:290:10333:1:36:0,-84.0015,-926.168	0/0:110:110,0:110:3893:0:0:0,-33.1133,-350.564
chr07	20509265	.	G	C	98268.6	PASS	AB=0.499142;ABP=3.0364;AC=140;AF=0.744681;AN=188;AO=6638;CIGAR=1X;DP=8693;DPB=8693;DPRA=0;EPP=14365.2;EPPR=4439.33;GTI=2;LEN=1;MEANALT=1.07447;MQM=29.9905;MQMR=38.3996;NS=94;NUMALT=1;ODDS=0.989386;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233981;QR=72866;RO=2047;RPL=6632;RPP=14365.2;RPPR=4439.33;RPR=6;RUN=1;SAF=6638;SAP=14417.2;SAR=0;SRF=2047;SRP=4448.01;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:33:21,12:21:748:12:420:-16.8547,0,-52.1438	0/1:80:40,40:40:1405:40:1399:-70.5538,0,-92.4529	0/1:187:104,83:104:3708:83:2964:-138.807,0,-247.442	0/1:255:113,142:113:3995:142:5029:-304.709,0,-266.988	1/1:72:0,72:0:0:72:2540:-178.655,-21.6742,0	1/1:61:0,61:0:0:61:2170:-141.182,-18.3628,0	1/1:119:0,119:0:0:119:4214:-321.919,-35.8226,0	1/1:171:0,171:0:0:171:6011:-401.629,-51.4761,0	1/1:74:0,74:0:0:74:2612:-171.824,-22.2762,0	0/1:93:40,53:40:1402:53:1896:-114.734,0,-93.3205	1/1:49:0,49:0:0:49:1705:-126.925,-14.7505,0	0/1:72:44,28:44:1576:28:951:-40.9595,0,-107.966	0/1:58:31,27:31:1112:27:944:-45.326,0,-74.1028	0/1:54:27,26:27:968:26:885:-47.5913,0,-66.2522	0/1:81:47,34:47:1684:34:1202:-67.1459,0,-120.725	1/1:58:0,58:0:0:58:2036:-144.263,-17.4597,0	1/1:22:0,22:0:0:22:770:-51.5956,-6.62266,0	1/1:22:0,22:0:0:22:779:-50.9909,-6.62266,0	0/1:7:2,5:2:72:5:176:-9.84689,0,-4.16094	0/1:139:61,78:61:2188:78:2750:-169.136,0,-145.34	1/1:152:0,152:0:0:152:5326:-376.652,-45.7566,0	1/1:97:2,94:2:72:94:3289:-253.066,-22.4983,0	1/1:126:2,124:2:68:124:4371:-322.491,-31.6687,0	1/1:70:0,70:0:0:70:2464:-175.215,-21.0721,0	0/1:78:41,37:41:1453:37:1316:-70.5675,0,-100.177	0/1:256:132,123:132:4725:123:4342:-265.077,0,-334.213	1/1:280:0,280:0:0:280:9894:-698.115,-84.2884,0	1/1:26:0,26:0:0:26:913:-62.4693,-7.82678,0	0/1:298:137,159:137:4888:159:5618:-356.236,0,-337.12	0/1:116:53,63:53:1885:63:2225:-121.498,0,-124.335	1/1:120:3,117:3:108:117:4126:-301.87,-27.2032,0	0/1:5:1,4:1:36:4:144:-8.93285,0,-1.88245	1/1:15:0,15:0:0:15:528:-37.0929,-4.51545,0	1/1:5:0,5:0:0:5:180:-11.8492,-1.50515,0	0/1:16:3,13:3:108:13:468:-25.6737,0,-3.46864	0/1:25:18,7:18:648:7:248:-8.42257,0,-45.9457	1/1:140:0,139:0:0:139:4886:-383.594,-41.8432,0	0/1:125:57,68:57:2018:68:2386:-133.309,0,-130.398	0/1:33:15,18:15:536:18:648:-32.9091,0,-34.2192	0/1:5:2,3:2:72:3:108:-6.39388,0,-4.93129	0/1:188:99,89:99:3525:89:3135:-162.497,0,-240.426	0/1:24:14,10:14:504:10:356:-18.3585,0,-34.9626	0/1:157:68,89:68:2425:89:3149:-176.56,0,-158.636	0/1:47:20,27:20:712:27:959:-58.4189,0,-47.3792	0/1:24:14,10:14:492:10:332:-17.4722,0,-35.8937	1/1:110:0,110:0:0:110:3892:-307.673,-33.1133,0	1/1:158:0,158:0:0:158:5549:-370.547,-47.5627,0	0/1:143:77,66:77:2760:66:2335:-134.062,0,-194.806	1/1:98:1,97:1:36:97:3444:-260.083,-26.0464,0	1/1:140:0,140:0:0:140:4984:-376.963,-42.1442,0	1/1:121:0,121:0:0:121:4296:-343.347,-36.4246,0	0/1:6:3,3:3:108:3:104:-6.60146,0,-7.86639	0/1:100:54,46:54:1921:46:1640:-78.9857,0,-128.844	1/1:102:0,102:0:0:102:3617:-285.106,-30.7051,0	0/1:12:7,5:7:252:5:180:-8.5712,0,-17.5014	0/1:176:83,93:83:2909:93:3234:-176.885,0,-191.668	0/1:58:34,24:34:1203:24:851:-46.7687,0,-87.0164	0/1:9:4,5:4:144:5:172:-11.5859,0,-10.0177	1/1:18:0,18:0:0:18:640:-50.9464,-5.41854,0	1/1:109:0,109:0:0:109:3849:-270.9,-32.8123,0	1/1:89:0,89:0:0:89:3066:-232.996,-26.7917,0	0/1:7:4,3:4:144:3:108:-6.4455,0,-9.92896	1/1:176:0,176:0:0:176:6202:-491.274,-52.9813,0	1/1:162:0,161:0:0:161:5670:-432.983,-48.4658,0	0/1:53:25,28:25:900:28:1000:-54.3142,0,-60.6656	1/1:120:0,120:0:0:120:4237:-322.553,-36.1236,0	0/1:183:65,118:65:2312:118:4100:-255.902,0,-144.582	0/1:168:100,68:100:3561:68:2377:-132.988,0,-254.627	0/1:36:21,15:21:752:15:532:-26.7747,0,-52.8705	1/1:64:0,64:0:0:64:2263:-147.182,-19.2659,0	0/1:32:16,16:16:557:16:553:-34.0414,0,-39.2418	0/1:12:5,7:5:180:7:240:-12.5194,0,-12.2168	1/1:100:0,100:0:0:100:3531:-234.489,-30.103,0	0/1:85:46,39:46:1648:39:1373:-63.9439,0,-108.689	1/1:131:0,131:0:0:131:4660:-327.022,-39.4349,0	1/1:213:0,213:0:0:213:7538:-575.097,-64.1194,0	0/1:121:63,58:63:2239:58:2034:-99.1894,0,-144.925	1/1:98:0,98:0:0:98:3484:-230.132,-29.5009,0	1/1:12:0,12:0:0:12:432:-28.5397,-3.61236,0	1/1:121:1,120:1:36:120:4218:-296.93,-33.037,0	1/1:148:0,148:0:0:148:5189:-338.87,-44.5524,0	1/1:203:0,202:0:0:202:7148:-545.559,-60.8081,0	1/1:46:0,46:0:0:46:1598:-122.823,-13.8474,0	0/1:70:33,37:33:1165:37:1290:-77.9202,0,-78.8396	0/1:27:14,13:14:496:13:464:-27.4062,0,-34.4356	0/1:116:51,65:51:1820:65:2286:-141.278,0,-121.469	1/1:19:0,19:0:0:19:672:-45.372,-5.71957,0	1/1:47:0,47:0:0:47:1634:-109.383,-14.1484,0	1/1:55:0,55:0:0:55:1956:-127.378,-16.5567,0	0/1:45:26,19:26:927:19:671:-34.5865,0,-64.6827	0/1:99:53,46:53:1867:46:1610:-84.0822,0,-128.554	0/1:63:50,13:50:1796:13:460:-15.6827,0,-136.058	1/1:193:0,193:0:0:193:6781:-517.541,-58.0988,0	1/1:84:0,84:0:0:84:2953:-224.073,-25.2865,0
chr07	20982454	.	C	T	28578.4	PASS	AB=0.493627;ABP=4.22814;AC=49;AF=0.260638;AN=188;AO=1722;CIGAR=1X;DP=7637;DPB=7637;DPRA=0.919188;EPP=3742.29;EPPR=12840.8;GTI=2;LEN=1;MEANALT=1.03704;MQM=59.9152;MQMR=59.9844;NS=94;NUMALT=1;ODDS=3.15112;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61678;QR=211795;RO=5912;RPL=0;RPP=3742.29;RPPR=12840.8;RPR=1722;RUN=1;SAF=1722;SAP=3742.29;SAR=0;SRF=5912;SRP=12840.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:11,13:11:392:13:468:-35.2349,0,-28.3953	0/1:21:13,8:13:464:8:288:-19.9458,0,-35.7759	0/1:68:29,39:29:1044:39:1396:-105.469,0,-73.8048	0/1:222:115,107:115:4116:107:3840:-278.899,0,-303.796	0/0:9:9,0:9:309:0:0:0,-2.70927,-28.1407	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.056	0/0:137:137,0:137:4912:0:0:0,-41.2411,-442.23	0/0:125:125,0:125:4476:0:0:0,-37.6287,-403.009	0/0:107:107,0:107:3836:0:0:0,-32.2102,-345.436	0/1:87:46,41:46:1629:41:1468:-106.213,0,-120.707	0/0:53:52,1:52:1872:1:36:0,-12.3563,-165.161	0/1:87:48,39:48:1720:39:1400:-100.11,0,-128.896	0/1:66:35,31:35:1252:31:1103:-79.6834,0,-93.1171	0/1:75:37,38:37:1316:38:1368:-100.844,0,-96.1646	0/1:79:42,37:42:1512:37:1332:-96.2433,0,-112.593	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/1:20:15,5:15:536:5:180:-10.5315,0,-42.5542	0/1:162:81,81:81:2916:81:2896:-212.109,0,-213.907	0/0:165:165,0:165:5908:0:0:0,-49.6699,-531.829	0/0:115:115,0:115:4124:0:0:0,-34.6184,-371.344	0/0:161:159,2:159:5700:2:72:0,-41.6291,-506.28	0/0:82:82,0:82:2948:0:0:0,-24.6845,-265.553	0/1:53:36,17:36:1296:17:612:-39.4588,0,-100.989	0/1:253:127,126:127:4556:126:4520:-330.788,0,-334.045	0/0:239:235,4:235:8424:4:144:0,-58.6325,-744.848	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/1:263:144,119:144:5164:119:4260:-304.408,0,-385.729	0/1:106:46,60:46:1648:60:2148:-161.678,0,-116.699	0/0:98:98,0:98:3507:0:0:0,-29.5009,-315.84	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/1:9:7,2:7:248:2:72:-4.12745,0,-19.9549	0/0:186:186,0:186:6692:0:0:0,-55.9916,-601.652	0/1:143:72,71:72:2572:71:2544:-186.155,0,-188.683	0/1:44:19,25:19:671:25:900:-68.0757,0,-47.4705	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:96:45,50:45:1620:50:1786:-132.212,0,-117.279	0/1:28:14,14:14:504:14:500:-36.9073,0,-37.2693	0/1:110:67,43:67:2408:43:1532:-105.06,0,-183.863	0/1:56:31,25:31:1116:25:900:-64.4633,0,-83.894	0/1:58:36,22:36:1296:22:792:-54.1459,0,-99.4842	0/0:121:121,0:121:4340:0:0:0,-36.4246,-390.774	0/0:80:79,0:79:2808:0:0:0,-23.7814,-252.638	0/1:107:40,67:40:1432:67:2408:-184.766,0,-96.967	0/0:51:50,1:50:1780:1:36:0,-11.7543,-156.885	0/0:177:177,0:177:6348:0:0:0,-53.2823,-571.396	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.495	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/1:59:32,27:32:1148:27:952:-68.2344,0,-85.8691	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/1:168:88,80:88:3145:80:2864:-207.42,0,-232.701	0/1:36:15,21:15:532:21:748:-56.8082,0,-37.376	0/1:18:8,10:8:288:10:352:-26.5997,0,-20.8489	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:64:64,0:64:2300:0:0:0,-19.2659,-207.261	0/0:95:95,0:95:3400:0:0:0,-28.5978,-306.215	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/0:151:151,0:151:5396:0:0:0,-45.4555,-485.772	0/0:152:147,5:147:5251:5:180:0,-29.2045,-456.176	0/1:61:29,32:29:1040:32:1129:-83.5535,0,-75.5515	0/0:54:54,0:54:1913:0:0:0,-16.2556,-172.445	0/1:81:52,29:52:1860:29:1036:-69.1705,0,-143.296	0/1:94:23,71:23:828:71:2540:-200.541,0,-46.5473	0/1:33:17,16:17:612:16:572:-41.8794,0,-45.4794	0/0:79:79,0:79:2832:0:0:0,-23.7814,-255.118	0/1:51:20,31:20:716:31:1116:-85.343,0,-49.4152	0/1:21:16,5:16:576:5:180:-10.2304,0,-45.8534	0/0:173:173,0:173:6181:0:0:0,-52.0782,-556.383	0/1:61:28,33:28:1004:33:1188:-88.8658,0,-72.313	0/0:164:164,0:164:5853:0:0:0,-49.3689,-526.882	0/0:134:134,0:134:4820:0:0:0,-40.338,-433.952	0/1:37:18,19:18:648:19:684:-50.7522,0,-47.5138	0/0:63:63,0:63:2259:0:0:0,-18.9649,-203.572	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:62:62,0:62:2211:0:0:0,-18.6639,-199.254	0/0:142:142,0:142:5077:0:0:0,-42.7463,-457.073	0/0:134:134,0:134:4804:0:0:0,-40.338,-432.515	0/0:45:45,0:45:1607:0:0:0,-13.5463,-144.919	0/1:68:37,31:37:1332:31:1108:-79.561,0,-99.7123	0/1:55:32,23:32:1148:23:828:-58.2875,0,-87.0732	0/1:105:61,44:61:2192:44:1580:-110.883,0,-165.937	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/0:79:79,0:79:2832:0:0:0,-23.7814,-255.118	0/1:42:16,26:16:576:26:927:-71.1041,0,-39.5317	0/1:123:62,61:62:2206:61:2177:-159.157,0,-161.777	0/1:59:21,38:21:756:38:1368:-105.66,0,-50.6065	0/0:117:115,1:115:4120:1:36:0,-31.681,-367.386	0/0:110:110,0:110:3944:0:0:0,-33.1133,-355.148
chr07	21905694	.	CTCCA	ATCCG,ATCCA	276732	PASS	AB=0.503013,0.491128;ABP=3.48138,7.09444;AC=135,53;AF=0.718085,0.281915;AN=188;AO=7458,2950;CIGAR=1X3M1X,1X4M;DP=10475;DPB=10668;DPRA=0,1.02962;EPP=15990.1,6348.2;EPPR=5.18177;GTI=0;LEN=5,1;MEANALT=2.32979,2.60938;MQM=59.735,59.9566;MQMR=60;NS=94;NUMALT=2;ODDS=2.24904;PAIRED=0,0;PAIREDR=0;PAO=482.5,482.5;PQA=16803.5,16803.5;PQR=0;PRO=0;QA=259494,104740;QR=35;RO=1;RPL=3110,1346;RPP=449.255,52.0076;RPPR=5.18177;RPR=4348,1604;RUN=1,1;SAF=3134,1353;SAP=415.322,46.8343;SAR=4324,1597;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:71:0,41,30:0:0:41,30:1430,1076:-204.402,-88.122,-75.7797,-116.634,0,-107.603	1/2:176:0,103,73:0:0:103,73:3575,2584:-501.407,-210.833,-179.827,-290.925,0,-268.95	1/2:142:0,74,68:0:0:74,68:2599,2440:-410.629,-199.274,-176.998,-211.71,0,-191.24	1/2:193:0,105,87:0:0:105,87:3637,3102:-548.022,-252.685,-221.077,-295.427,0,-269.237	1/1:103:0,100,0:0:0:100,0:3493,0:-314.208,-30.103,0,-314.208,-30.103,-314.208	1/1:57:0,55,0:0:0:55,0:1918,0:-172.61,-16.5567,0,-172.61,-16.5567,-172.61	1/1:174:0,173,0:0:0:173,0:6039,0:-543.269,-52.0782,0,-543.269,-52.0782,-543.269	1/2:105:0,60,44:0:0:60,44:2067,1572:-296.036,-128.167,-110.105,-167.862,0,-154.616	1/1:141:0,140,0:0:0:140,0:4825,0:-434.104,-42.1442,0,-434.104,-42.1442,-434.104	1/2:66:0,35,30:0:0:35,30:1242,1072:-188.564,-87.3723,-76.8362,-101.159,0,-92.1284	1/1:128:0,126,0:0:0:126,0:4420,0:-396.352,-37.9298,0,-396.352,-37.9298,-396.352	1/1:136:0,136,0:0:0:136,0:4687,0:-420.697,-40.9401,0,-420.697,-40.9401,-420.697	1/2:128:0,55,72:0:0:55,72:1906,2531:-360.043,-205.224,-188.668,-154.033,0,-132.359	1/2:148:0,67,79:0:0:67,79:2298,2824:-416.595,-230.033,-209.864,-186.331,0,-162.549	1/2:114:0,48,64:0:0:48,64:1658,2286:-320.848,-186.146,-171.697,-134.469,0,-115.204	1/1:113:0,111,1:0:0:111,1:3832,32:-344.446,-33.4143,0,-341.867,-31.1568,-341.566	1/1:129:0,128,0:0:0:128,0:4425,0:-396.771,-38.5318,0,-396.771,-38.5318,-396.771	1/1:91:0,91,0:0:0:91,0:3176,0:-285.156,-27.3937,0,-285.156,-27.3937,-285.156	1/2:101:0,47,54:0:0:47,54:1647,1908:-289.51,-155.503,-141.355,-134.125,0,-117.869	1/2:156:0,89,67:0:0:89,67:3110,2393:-448.429,-195.45,-168.658,-253.333,0,-233.164	1/1:205:0,205,0:0:0:205,0:7113,0:-640.232,-61.7112,0,-640.232,-61.7112,-640.232	1/2:36:0,5,31:0:0:5,31:157,1101:-102.681,-90.0664,-88.5613,-12.9338,0,-3.6019	1/1:97:0,97,0:0:0:97,0:3354,0:-302.075,-29.1999,0,-302.075,-29.1999,-302.075	1/2:167:0,101,66:0:0:101,66:3573,2334:-481.429,-190.449,-160.045,-291.334,0,-271.466	1/2:100:0,47,53:0:0:47,53:1612,1881:-284.465,-153.612,-139.464,-131.201,0,-115.246	1/2:223:0,105,118:0:0:105,118:3664,4183:-639.069,-341.13,-309.522,-298.291,0,-262.769	1/1:235:0,233,0:0:0:233,0:8148,0:-733.019,-70.14,0,-733.019,-70.14,-733.019	1/1:56:0,55,1:0:0:55,1:1916,36:-170.867,-16.5567,0,-167.93,-13.2594,-167.629	1/2:181:0,86,95:0:0:86,95:2987,3393:-519.806,-276.985,-251.096,-243.173,0,-214.575	1/1:99:0,96,3:0:0:96,3:3316,93:-298.349,-28.8989,0,-290.886,-21.1252,-289.983	1/1:125:0,123,1:0:0:123,1:4335,36:-389.869,-37.0267,0,-386.931,-34.1446,-386.63	1/2:14:0,10,4:0:0:10,4:358,140:-40.8805,-11.6953,-8.68502,-29.4938,0,-28.2897	1/1:31:0,31,0:0:0:31,0:1084,0:-97.8555,-9.33193,0,-97.8555,-9.33193,-97.8555	1/1:5:0,5,0:0:0:5,0:178,0:-16.3687,-1.50515,0,-16.3687,-1.50515,-16.3687	1/1:13:0,12,1:0:0:12,1:421,36:-37.8575,-3.61236,0,-34.9193,-0.315115,-34.6183	1/2:19:0,16,3:0:0:16,3:559,89:-52.9182,-7.40127,-2.58479,-45.8218,0,-44.9188	1/2:313:1,149,162:1:35:149,162:5186,5760:-886.349,-464.977,-422.971,-417.263,0,-371.344	1/2:91:0,54,37:0:0:54,37:1868,1328:-260.403,-108.626,-92.3699,-152.073,0,-140.934	1/2:178:0,81,96:0:0:81,96:2834,3380:-505.005,-274.465,-250.081,-229.842,0,-200.943	1/2:8:0,2,6:0:0:2,6:72,216:-23.8592,-17.9843,-17.3823,-6.23466,0,-4.42848	1/2:108:0,69,37:0:0:69,37:2420,1320:-304.523,-107.604,-86.8331,-196.914,0,-185.776	1/2:78:0,38,39:0:0:38,39:1345,1369:-220.338,-110.787,-99.3475,-108.932,0,-97.1923	1/2:150:0,90,59:0:0:90,59:3171,2108:-430.035,-171.869,-144.776,-258.162,0,-240.401	1/2:122:0,60,61:0:0:60,61:2098,2158:-344.953,-174.313,-156.251,-169.195,0,-150.833	1/2:96:0,47,48:0:0:47,48:1625,1703:-269.88,-137.851,-123.703,-131.134,0,-116.684	1/1:53:0,53,0:0:0:53,0:1832,0:-165.158,-15.9546,0,-165.158,-15.9546,-165.158	1/1:112:0,108,1:0:0:108,1:3751,36:-337.411,-32.5112,0,-334.473,-29.568,-334.172	1/2:82:0,43,37:0:0:43,37:1517,1309:-230.147,-106.621,-93.6767,-123.528,0,-112.39	1/1:61:0,60,0:0:0:60,0:2077,0:-186.76,-18.0618,0,-186.76,-18.0618,-186.76	1/1:123:0,122,1:0:0:122,1:4268,36:-383.314,-36.7257,0,-380.377,-33.4284,-380.076	1/2:128:0,67,60:0:0:67,60:2317,2133:-362.21,-173.943,-153.774,-188.385,0,-170.324	1/2:5:0,3,2:0:0:3,2:108,72:-15.0469,-6.23466,-5.33157,-9.17208,0,-8.57002	1/2:177:0,99,78:0:0:99,78:3446,2770:-506.247,-226.059,-196.257,-280.54,0,-257.06	1/1:34:0,34,0:0:0:34,0:1195,0:-107.854,-10.235,0,-107.854,-10.235,-107.854	1/2:17:0,9,8:0:0:9,8:300,288:-48.1247,-23.8592,-21.1499,-24.6128,0,-22.2046	1/2:142:0,74,68:0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chr07	21916364	.	A	G	155603	PASS	AB=0.501839;ABP=3.54533;AC=54;AF=0.287234;AN=188;AO=9176;CIGAR=1X;DP=27845;DPB=27845;DPRA=3.08248;EPP=19919.8;EPPR=40514;GTI=2;LEN=1;MEANALT=1.07042;MQM=59.9827;MQMR=59.9923;NS=94;NUMALT=1;ODDS=3.22443;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=328003;QR=667456;RO=18664;RPL=9176;RPP=19928.4;RPPR=40531.4;RPR=0;RUN=1;SAF=1;SAP=19919.8;SAR=9175;SRF=2;SRP=40514;SRR=18662;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:56:33,23:33:1184:23:828:-57.9864,0,-90.0106	0/1:263:116,147:116:4118:147:5267:-394.994,0,-291.633	0/1:264:112,152:112:4009:152:5418:-408.277,0,-281.525	0/1:232:123,109:123:4390:109:3893:-280.724,0,-325.432	0/0:105:105,0:105:3768:0:0:0,-31.6081,-339.314	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/0:157:156,1:156:5592:1:36:0,-43.6634,-499.803	0/1:149:109,40:109:3886:40:1422:-83.4217,0,-305.079	0/0:248:248,0:248:8846:0:0:0,-74.6554,-796.126	0/1:83:43,40:43:1544:40:1436:-104.552,0,-114.268	0/0:464:463,1:463:16632:1:36:0,-136.08,-1492.93	0/0:68:68,0:68:2420:0:0:0,-20.47,-218.054	0/1:77:44,33:44:1565:33:1184:-83.689,0,-117.96	0/1:97:48,49:48:1716:49:1744:-128.044,0,-125.526	0/1:53:25,28:25:900:28:1008:-75.0818,0,-65.3664	0/0:68:67,1:67:2397:1:36:0,-16.8718,-212.387	0/0:68:68,0:68:2444:0:0:0,-20.47,-220.215	0/0:50:50,0:50:1785:0:0:0,-15.0515,-160.931	0/1:262:150,112:150:5388:112:3994:-280.779,0,-406.179	0/1:262:130,132:130:4659:132:4736:-347.528,0,-340.601	0/0:284:284,0:284:10180:0:0:0,-85.4925,-915.938	0/1:131:54,77:54:1940:77:2751:-208.396,0,-135.441	0/0:132:132,0:132:4698:0:0:0,-39.736,-422.979	0/1:120:85,35:85:3044:35:1241:-75.8705,0,-238.066	0/1:110:57,53:57:2044:53:1900:-138.165,0,-151.118	0/1:351:173,178:173:6193:178:6353:-466.2,0,-451.804	0/0:308:308,0:308:11019:0:0:0,-92.7172,-991.6	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/1:388:179,209:179:6397:209:7483:-556.711,0,-459.019	0/0:182:176,6:176:6306:6:212:0,-35.3627,-548.203	0/0:189:188,1:188:6732:1:36:0,-53.2964,-602.356	0/1:1021:505,516:505:18083:516:18393:-1347.55,0,-1319.71	0/0:1109:1105,4:1105:39541:4:144:0,-320.529,-3544.06	0/0:910:909,1:909:32524:1:36:0,-270.339,-2922.53	0/1:1472:784,687:784:27981:687:24553:-1766.07,0,-2074.44	0/1:1125:638,487:638:22730:487:17371:-1224.36,0,-1706.44	0/1:198:83,115:83:2984:115:4112:-310.661,0,-209.187	0/1:228:102,126:102:3648:126:4489:-335.545,0,-259.89	0/1:560:285,274:285:10224:274:9815:-714.779,0,-751.598	0/1:361:191,169:191:6822:169:6048:-435.769,0,-505.418	0/1:133:76,57:76:2717:57:2048:-144.555,0,-204.735	0/1:254:117,137:117:4200:137:4928:-367.206,0,-301.718	0/1:286:140,146:140:4986:146:5222:-384.022,0,-362.791	0/1:74:33,41:33:1188:41:1457:-109.149,0,-84.9524	0/1:65:33,32:33:1180:32:1148:-84.0629,0,-86.9411	0/0:150:149,1:149:5348:1:36:0,-41.5562,-477.853	0/0:230:228,2:228:8165:2:72:0,-62.4002,-728.025	0/1:243:105,138:105:3737:138:4918:-369.619,0,-263.38	0/0:169:167,2:167:5984:2:72:0,-44.0373,-531.829	0/0:263:262,1:262:9386:1:36:0,-75.5726,-841.1	0/1:206:113,93:113:4056:93:3314:-236.464,0,-303.214	0/1:1255:539,716:539:19252:716:25607:-1926.11,0,-1354.43	0/1:229:118,111:118:4225:111:3976:-289.094,0,-311.492	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:941:467,474:467:16684:474:16970:-1243.67,0,-1217.94	0/1:197:87,110:87:3109:110:3944:-295.848,0,-220.733	0/1:94:37,57:37:1328:57:2048:-156.295,0,-91.5254	0/1:927:433,494:433:15436:494:17593:-1303.91,0,-1109.87	0/0:1072:1069,3:1069:38082:3:108:0,-312.629,-3416.06	0/0:101:101,0:101:3594:0:0:0,-30.404,-323.665	0/0:112:112,0:112:4016:0:0:0,-33.7154,-361.628	0/1:798:419,379:419:14968:379:13581:-981.825,0,-1106.62	0/0:56:56,0:56:1997:0:0:0,-16.8577,-180.002	0/0:195:193,2:193:6898:2:72:0,-51.8641,-614.049	0/1:88:48,40:48:1709:40:1424:-101.967,0,-127.603	0/0:140:139,1:139:4984:1:36:0,-38.5459,-445.109	0/1:251:118,133:118:4206:133:4746:-351.736,0,-303.16	0/1:191:63,128:63:2260:128:4562:-353.25,0,-146.166	0/1:441:196,245:196:7021:245:8775:-656.98,0,-499.196	0/0:88:87,1:87:3105:1:36:0,-22.8924,-276.078	0/1:69:30,38:30:1072:38:1368:-102.591,0,-75.9627	0/1:1005:515,490:515:18383:490:17495:-1271.63,0,-1351.51	0/0:125:125,0:125:4423:0:0:0,-37.6287,-398.231	0/1:99:47,52:47:1676:52:1857:-137.607,0,-121.325	0/0:245:245,0:245:8785:0:0:0,-73.7523,-790.505	0/0:238:238,0:238:8529:0:0:0,-71.6451,-767.606	0/1:85:46,39:46:1644:39:1392:-99.9915,0,-122.661	0/0:125:123,2:123:4405:2:72:0,-30.792,-389.784	0/0:1467:1463,3:1463:52383:3:108:0,-431.595,-4702.53	0/0:138:138,0:138:4911:0:0:0,-41.5421,-442.139	0/1:151:68,83:68:2429:83:2980:-222.976,0,-173.408	0/1:344:177,167:177:6330:167:5976:-434.392,0,-466.234	0/1:125:65,60:65:2336:60:2147:-155.868,0,-172.87	0/1:61:32,29:32:1144:29:1040:-75.5515,0,-84.9067	0/1:61:29,32:29:1031:32:1148:-85.267,0,-74.7374	0/1:152:67,85:67:2378:85:3029:-227.085,0,-168.518	0/0:35:35,0:35:1248:0:0:0,-10.536,-112.625	0/0:73:73,0:73:2616:0:0:0,-21.9752,-235.688	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/1:571:305,266:305:10943:266:9519:-684.779,0,-812.875	0/1:901:465,436:465:16692:436:15592:-1131.75,0,-1230.7	0/1:59:15,44:15:536:44:1576:-124.371,0,-30.814	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03
chr07	22157563	.	CAGC	CAATA,CAATC	132897	PASS	AB=0.482454,0.512533;ABP=16.3452,9.81384;AC=134,54;AF=0.712766,0.287234;AN=188;AO=5760,2560;CIGAR=1M1I1M2X,1M1I1M1X1M;DP=8360;DPB=10444.5;DPRA=0,1.08132;EPP=12510.7,5561.98;EPPR=0;GTI=0;LEN=5,5;MEANALT=1.95745,2.38596;MQM=29.2825,42.3707;MQMR=0;NS=94;NUMALT=2;ODDS=5.90931;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=202249,89441;QR=0;RO=0;RPL=5760,2560;RPP=12510.7,5561.98;RPPR=0;RPR=0,0;RUN=1,1;SAF=5760,2560;SAP=12510.7,5561.98;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:58:0,30,28:0:0:30,28:1041,980:-140.654,-76.3127,-67.2818,-64.6459,0,-56.217	1/2:101:0,58,43:0:0:58,43:2034,1491:-239.376,-115.268,-97.8086,-124.413,0,-111.469	1/2:131:0,53,78:0:0:53,78:1878,2678:-323.448,-206.615,-190.661,-117.13,0,-93.65	1/2:110:0,46,64:0:0:46,64:1620,2252:-284.786,-179.959,-166.111,-105.139,0,-85.873	1/1:63:0,63,0:0:0:63,0:2206,0:-154.116,-18.9649,0,-154.116,-18.9649,-154.116	1/1:36:0,36,0:0:0:36,0:1274,0:-88.8913,-10.8371,0,-88.8913,-10.8371,-88.8913	1/1:123:0,121,0:0:0:121,0:4248,0:-310.61,-36.4246,0,-310.61,-36.4246,-310.61	1/2:129:0,59,67:0:0:59,67:2064,2313:-304.446,-178.247,-160.486,-126.163,0,-105.994	1/1:125:0,125,0:0:0:125,0:4408,0:-306.458,-37.6288,0,-306.458,-37.6288,-306.458	1/2:80:0,33,47:0:0:33,47:1142,1656:-207.102,-132.841,-122.907,-74.5705,0,-60.4221	1/1:100:0,99,0:0:0:99,0:3475,0:-249.418,-29.802,0,-249.418,-29.802,-249.418	1/1:78:0,78,0:0:0:78,0:2736,0:-186.714,-23.4803,0,-186.714,-23.4803,-186.714	1/2:67:0,30,37:0:0:30,37:1055,1300:-165.879,-100.942,-91.911,-65.2384,0,-54.1003	1/2:96:0,49,47:0:0:49,47:1742,1666:-237.583,-131.898,-117.147,-105.995,0,-91.8468	1/2:60:0,31,28:0:0:31,28:1101,986:-150.223,-78.912,-69.5801,-71.338,0,-62.9092	1/1:51:0,51,0:0:0:51,0:1787,0:-123.743,-15.3525,0,-123.743,-15.3525,-123.743	1/1:62:0,61,0:0:0:61,0:2124,0:-148.485,-18.3628,0,-148.485,-18.3628,-148.485	1/1:41:0,41,0:0:0:41,0:1444,0:-99.7462,-12.3422,0,-99.7462,-12.3422,-99.7462	1/2:55:0,28,27:0:0:28,27:994,933:-131.395,-71.6079,-63.1791,-60.0866,0,-51.9588	1/2:165:0,70,93:0:0:70,93:2481,3264:-420.427,-260.156,-239.084,-160.311,0,-132.315	1/1:143:0,143,0:0:0:143,0:5013,0:-351.344,-43.0473,0,-351.344,-43.0473,-351.344	1/2:98:0,20,77:0:0:20,77:703,2693:-263.663,-215.506,-209.485,-48.2544,0,-25.0751	1/1:82:0,81,0:0:0:81,0:2850,0:-208.857,-24.3834,0,-208.857,-24.3834,-208.857	1/2:124:0,64,59:0:0:64,59:2238,2085:-301.777,-164.963,-145.697,-136.873,0,-119.112	1/2:71:0,32,39:0:0:32,39:1098,1351:-173.323,-106.791,-97.1577,-66.8289,0,-55.0888	1/2:259:0,121,137:0:0:121,137:4283,4734:-671.53,-379.142,-342.717,-292.41,0,-251.168	1/1:163:0,162,0:0:0:162,0:5663,0:-395.214,-48.7669,0,-395.214,-48.7669,-395.214	1/1:35:0,35,0:0:0:35,0:1226,0:-85.5429,-10.5361,0,-85.5429,-10.5361,-85.5429	1/2:180:0,99,81:0:0:99,81:3495,2866:-468.929,-230.64,-200.838,-238.617,0,-214.233	1/1:106:0,103,2:0:0:103,2:3626,72:-252.71,-31.0061,0,-247.005,-25.1965,-246.403	1/1:111:0,109,1:0:0:109,1:3819,36:-281.392,-32.8123,0,-278.509,-29.8813,-278.208	1/2:10:0,8,2:0:0:8,2:264,70:-22.2578,-5.84218,-3.43394,-16.7394,0,-16.1373	1/1:25:0,25,0:0:0:25,0:891,0:-61.5026,-7.52575,0,-61.5026,-7.52575,-61.5026	1/1:11:0,11,0:0:0:11,0:390,0:-27.2739,-3.31133,0,-27.2739,-3.31133,-27.2739	1/2:11:0,4,7:0:0:4,7:131,242:-27.4387,-19.0727,-17.8686,-8.65589,0,-6.54868	1/2:9:0,4,5:0:0:4,5:143,180:-22.7747,-14.1722,-12.968,-8.90586,0,-7.40071	1/2:184:0,81,103:0:0:81,103:2843,3641:-487.62,-293.374,-268.99,-194.568,0,-163.562	1/2:226:0,112,113:0:0:112,113:3935,3950:-552.589,-311.548,-277.833,-241.131,0,-207.115	1/2:56:0,28,28:0:0:28,28:982,959:-133.295,-73.8394,-65.4105,-59.7526,0,-51.3237	1/2:12:0,8,4:0:0:8,4:288,129:-27.4869,-10.3821,-7.97381,-17.4041,0,-16.2	1/2:88:0,48,39:0:0:48,39:1699,1359:-207.3,-107.297,-92.8471,-100.068,0,-88.328	1/2:54:0,24,30:0:0:24,30:853,1048:-134.019,-82.4516,-75.2268,-51.8692,0,-42.8383	1/2:110:0,60,49:0:0:60,49:2105,1700:-263.261,-134.383,-116.321,-128.912,0,-114.161	1/2:56:0,24,32:0:0:24,32:847,1128:-144.772,-90.2594,-83.0347,-54.8239,0,-45.191	1/2:55:0,31,24:0:0:31,24:1081,849:-137.84,-67.7855,-58.4535,-70.3735,0,-63.1488	1/1:86:0,86,0:0:0:86,0:3060,0:-234.193,-25.8886,0,-234.193,-25.8886,-234.193	1/1:121:0,121,0:0:0:121,0:4281,0:-298.29,-36.4246,0,-298.29,-36.4246,-298.29	1/2:143:0,85,58:0:0:85,58:2992,2022:-353.827,-161.409,-135.822,-192.737,0,-175.277	1/1:107:0,106,0:0:0:106,0:3684,0:-272.235,-31.9092,0,-272.235,-31.9092,-272.235	1/1:124:0,124,0:0:0:124,0:4351,0:-321.532,-37.3277,0,-321.532,-37.3277,-321.532	1/2:170:0,88,82:0:0:88,82:3111,2923:-449.714,-235.61,-209.12,-214.432,0,-189.748	1/2:11:0,7,4:0:0:7,4:249,136:-27.2767,-11.1887,-9.08146,-16.4063,0,-15.2022	1/2:214:0,104,107:0:0:104,107:3609,3748:-511.007,-288.446,-257.139,-222.627,0,-190.417	1/1:22:0,22,0:0:0:22,0:767,0:-59.1071,-6.62266,0,-59.1071,-6.62266,-59.1071	1/2:24:0,12,12:0:0:12,12:428,428:-60.022,-33.5,-29.8876,-26.8318,0,-23.2195	1/2:122:0,72,48:0:0:72,48:2517,1673:-285.168,-131.903,-110.229,-153.374,0,-138.924	1/2: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chr07	22381218	.	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chr07	22509259	.	CAC	CC	54704.3	PASS	AB=0.468521;ABP=65.2144;AC=54;AF=0.287234;AN=188;AO=3395;CIGAR=1M1D1M;DP=12891;DPB=11758.7;DPRA=0.992478;EPP=7366.48;EPPR=20577.7;GTI=1;LEN=1;MEANALT=1.17241;MQM=58.9116;MQMR=53.1697;NS=94;NUMALT=1;ODDS=0.823802;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=120075;QR=333882;RO=9475;RPL=3394;RPP=7366.48;RPPR=20577.7;RPR=1;RUN=1;SAF=0;SAP=7375.16;SAR=3395;SRF=0;SRP=20577.7;SRR=9475;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:104:46,57:46:1616:57:2013:-150.044,0,-114.202	0/1:113:62,51:62:2190:51:1798:-127.659,0,-163.052	0/1:270:141,129:141:4947:129:4594:-332.105,0,-363.195	0/1:301:153,147:153:5389:147:5182:-375.694,0,-392.912	0/0:94:94,0:94:3313:0:0:0,-28.2968,-297.267	0/0:83:83,0:83:2914:0:0:0,-24.9855,-261.977	0/0:196:196,0:196:6889:0:0:0,-59.0019,-618.818	0/1:213:123,90:123:4345:90:3205:-224.397,0,-326.525	0/0:188:188,0:188:6562:0:0:0,-56.5936,-589.302	0/1:92:44,48:44:1561:48:1696:-125.16,0,-112.826	0/0:81:80,0:80:2835:0:0:0,-24.0824,-254.133	0/0:126:124,0:124:4330:0:0:0,-37.3277,-388.785	0/1:81:51,30:51:1797:30:1080:-73.094,0,-136.966	0/1:102:60,42:60:2101:42:1450:-99.6308,0,-158.265	0/1:91:43,48:43:1538:48:1713:-127.028,0,-110.855	0/0:99:99,0:99:3509:0:0:0,-29.802,-315.608	0/0:60:60,0:60:2125:0:0:0,-18.0618,-191.307	0/0:39:39,0:39:1391:0:0:0,-11.7402,-125.169	0/1:41:18,23:18:630:23:813:-61.1249,0,-44.6202	0/1:132:60,72:60:2116:72:2518:-186.745,0,-150.47	0/0:208:208,0:208:7314:0:0:0,-62.6142,-656.794	0/1:167:79,88:79:2783:88:3095:-228.426,0,-199.687	0/0:175:175,0:175:6161:0:0:0,-52.6802,-552.314	0/1:136:71,65:71:2495:65:2320:-167.826,0,-183.209	0/1:147:79,68:79:2753:68:2341:-165.886,0,-203.169	0/1:395:209,186:209:7354:186:6581:-473.118,0,-540.407	0/0:416:416,0:416:14735:0:0:0,-125.228,-1322.48	0/0:43:43,0:43:1499:0:0:0,-12.9443,-134.778	0/1:369:250,119:250:8847:119:4199:-266.545,0,-681.51	0/0:185:180,5:180:6367:5:176:0,-39.5055,-555.443	0/0:198:196,2:196:6920:2:72:0,-52.7681,-614.426	0/1:4:2,2:2:64:2:72:-5.6326,0,-4.86836	0/0:49:49,0:49:1724:0:0:0,-14.7505,-155.2	0/0:10:10,0:10:348:0:0:0,-3.0103,-31.628	0/1:21:11,10:11:394:10:356:-26.0596,0,-29.441	0/1:41:21,20:21:728:20:682:-49.3524,0,-53.4356	0/1:209:112,97:112:3924:97:3446:-246.092,0,-289.334	0/1:146:79,67:79:2783:67:2388:-171.172,0,-206.298	0/1:49:29,18:29:1025:18:629:-42.4966,0,-78.0392	0/1:9:4,5:4:136:5:180:-13.8428,0,-9.85078	0/1:180:108,72:108:3816:72:2506:-171.603,0,-288.074	0/1:41:15,25:15:524:25:896:-68.3974,0,-34.9144	0/1:255:142,113:142:4992:113:4037:-286.661,0,-370.894	0/1:61:32,29:32:1132:29:1036:-75.1798,0,-83.2693	0/1:69:38,31:38:1320:31:1108:-79.2481,0,-98.0858	0/0:201:200,0:200:7044:0:0:0,-60.206,-631.808	0/0:153:152,0:152:5383:0:0:0,-45.7566,-483.142	0/1:250:134,114:134:4739:114:3998:-284.732,0,-350.694	0/0:123:123,0:123:4325:0:0:0,-37.0267,-388.604	0/1:165:87,78:87:3077:78:2765:-199.373,0,-226.961	0/1:194:134,60:134:4727:60:2102:-130.976,0,-366.064	0/1:29:19,10:19:657:10:352:-23.2848,0,-50.5624	0/1:215:122,93:122:4300:93:3283:-230.926,0,-322.042	0/0:124:124,0:124:4349:0:0:0,-37.3277,-389.988	0/1:19:10,9:10:336:9:305:-22.0576,0,-24.8211	0/1:240:136,104:136:4760:104:3711:-261.748,0,-355.195	0/1:79:38,41:38:1362:41:1453:-107.223,0,-98.8717	0/1:23:12,11:12:432:11:396:-29.0305,0,-32.0485	0/0:31:31,0:31:1109:0:0:0,-9.33193,-99.8758	0/0:184:183,0:183:6404:0:0:0,-55.0885,-574.486	0/0:163:162,1:162:5735:1:36:0,-45.4701,-511.408	0/1:21:14,7:14:470:7:252:-16.7045,0,-36.2266	0/0:184:183,0:183:6452:0:0:0,-55.0885,-578.82	0/0:277:277,0:277:9760:0:0:0,-83.3853,-876.168	0/1:141:65,76:65:2271:76:2703:-200.938,0,-161.791	0/0:124:124,0:124:4367:0:0:0,-37.3277,-392.223	0/1:218:125,91:125:4410:91:3225:-224.906,0,-330.184	0/1:240:69,170:69:2437:170:6039:-471.226,0,-146.586	0/0:71:71,0:71:2522:0:0:0,-21.3731,-226.331	0/0:158:157,1:157:5569:1:36:0,-43.9645,-497.009	0/1:53:20,33:20:710:33:1180:-90.5167,0,-47.93	0/1:31:20,11:20:716:11:372:-24.4565,0,-55.2138	0/0:132:132,0:132:4657:0:0:0,-39.736,-418.659	0/1:57:20,37:20:710:37:1305:-100.504,0,-47.0039	0/0:318:318,0:318:11158:0:0:0,-95.7275,-1001.26	0/0:273:273,0:273:9742:0:0:0,-82.1812,-873.29	0/1:263:133,130:133:4691:130:4525:-327.571,0,-342.504	0/0:175:175,0:175:6169:0:0:0,-52.6802,-554.61	0/0:38:38,0:38:1343:0:0:0,-11.4391,-120.943	0/0:148:146,0:146:5162:0:0:0,-43.9504,-462.863	0/1:189:94,95:94:3296:95:3343:-243.997,0,-238.981	0/1:301:181,119:181:6346:119:4203:-287.521,0,-478.545	0/1:73:35,38:35:1209:38:1349:-99.7126,0,-86.9197	0/1:96:50,46:50:1789:46:1647:-119.437,0,-131.866	0/1:46:22,24:22:780:24:856:-63.3889,0,-56.1624	0/1:154:73,81:73:2532:81:2888:-213.712,0,-180.856	0/0:30:30,0:30:1060:0:0:0,-9.0309,-95.4326	0/0:96:95,0:95:3381:0:0:0,-28.5978,-303.741	0/0:92:92,0:92:3240:0:0:0,-27.6948,-290.381	0/1:72:32,40:32:1108:40:1436:-107.077,0,-78.0785	0/1:152:77,75:77:2710:75:2665:-194.216,0,-198.04	0/1:67:26,41:26:931:41:1468:-112.138,0,-63.7623	0/0:207:207,0:207:7230:0:0:0,-62.3132,-649.163	0/0:112:112,0:112:3979:0:0:0,-33.7154,-355.66
chr07	22509266	.	T	C	193252	PASS	AB=0.521339;ABP=31.8324;AC=134;AF=0.712766;AN=188;AO=9389;CIGAR=1X;DP=12889;DPB=12889;DPRA=0;EPP=20391;EPPR=7600.99;GTI=1;LEN=1;MEANALT=1.01064;MQM=53.1241;MQMR=58.7919;NS=94;NUMALT=1;ODDS=0.099557;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=335384;QR=123015;RO=3499;RPL=9389;RPP=20391;RPPR=7600.99;RPR=0;RUN=1;SAF=0;SAP=20391;SAR=9389;SRF=0;SRP=7600.99;SRR=3499;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:106:61,45:61:2168:45:1616:-113.443,0,-163.33	0/1:113:51,62:51:1790:62:2205:-164.39,0,-126.892	0/1:274:133,141:133:4655:141:5013:-367.456,0,-336.319	0/1:300:147,153:147:5212:153:5457:-398.555,0,-378.42	1/1:94:0,94:0:0:94:3372:-302.343,-28.2968,0	1/1:82:0,82:0:0:82:2869:-257.922,-24.6845,0	1/1:195:0,195:0:0:195:7000:-628.731,-58.7009,0	0/1:215:92,123:92:3239:123:4397:-330.576,0,-226.864	1/1:186:0,186:0:0:186:6634:-595.63,-55.9916,0	0/1:92:49,43:49:1710:43:1548:-111.65,0,-126.354	1/1:80:0,80:0:0:80:2872:-257.543,-24.0824,0	1/1:124:0,124:0:0:124:4448:-398.783,-37.3277,0	0/1:85:34,51:34:1208:51:1831:-138.83,0,-83.3569	0/1:104:44,60:44:1556:60:2130:-160.165,0,-108.23	0/1:92:49,43:49:1740:43:1510:-108.078,0,-129.159	1/1:101:0,101:0:0:101:3624:-325.916,-30.404,0	1/1:60:0,60:0:0:60:2156:-193.987,-18.0618,0	1/1:40:0,40:0:0:40:1440:-129.432,-12.0412,0	0/1:42:24,18:24:852:18:648:-45.9339,0,-64.3352	0/1:132:72,60:72:2480:60:2137:-152.35,0,-183.356	1/1:201:0,201:0:0:201:7153:-642.348,-60.507,0	0/1:164:89,75:89:3098:75:2688:-192.006,0,-229.63	1/1:176:0,176:0:0:176:6267:-561.727,-52.9813,0	0/1:137:66,71:66:2318:71:2552:-187.189,0,-167.424	0/1:148:70,78:70:2454:78:2800:-206.474,0,-174.949	0/1:397:192,205:192:6771:205:7280:-533.306,0,-489.208	1/1:413:0,413:0:0:413:14748:-1323.48,-124.325,0	1/1:43:0,43:0:0:43:1525:-137.191,-12.9443,0	0/1:373:126,247:126:4395:247:8815:-677.024,0,-282.776	1/1:186:6,180:6:216:180:6431:-557.614,-36.2011,0	1/1:198:2,196:2:68:196:6998:-621.8,-53.1468,0	0/1:4:2,2:2:64:2:72:-5.62291,0,-4.87457	1/1:48:0,48:0:0:48:1720:-154.823,-14.4494,0	1/1:9:0,9:0:0:9:320:-29.114,-2.70927,0	0/1:21:10,11:10:356:11:396:-29.6192,0,-26.0596	0/1:41:20,21:20:697:21:748:-55.2385,0,-50.7084	0/1:208:98,110:98:3485:110:3937:-290.857,0,-249.906	0/1:150:70,79:70:2472:79:2817:-207.453,0,-177.615	0/1:49:19,30:19:680:30:1065:-81.2092,0,-46.6728	0/1:9:5,4:5:172:4:144:-10.5855,0,-13.1087	0/1:182:76,106:76:2627:106:3804:-286.429,0,-181.854	0/1:40:25,15:25:876:15:539:-36.5076,0,-67.0514	0/1:257:115,142:115:4035:142:5055:-376.492,0,-285.892	0/1:63:31,32:31:1104:32:1133:-82.6973,0,-79.1521	0/1:68:31,37:31:1074:37:1332:-99.2715,0,-76.4838	1/1:199:0,199:0:0:199:7114:-638.049,-59.905,0	1/1:150:0,150:0:0:150:5320:-477.706,-45.1545,0	0/1:248:114,134:114:4007:134:4782:-354.582,0,-285.791	1/1:120:0,120:0:0:120:4295:-385.79,-36.1236,0	0/1:165:79,86:79:2796:86:3092:-228.29,0,-202.138	0/1:193:61,132:61:2114:132:4748:-368.173,0,-132.099	0/1:30:10,20:10:360:20:708:-54.8387,0,-23.7093	0/1:213:93,120:93:3273:120:4297:-322.361,0,-230.626	1/1:121:0,121:0:0:121:4306:-385.812,-36.4246,0	0/1:19:10,9:10:352:9:309:-22.394,0,-26.2986	0/1:242:106,136:106:3714:136:4845:-361.976,0,-261.356	0/1:79:40,39:40:1417:39:1396:-101.923,0,-103.985	0/1:23:11,12:11:392:12:432:-32.0485,0,-28.6678	1/1:31:0,31:0:0:31:1112:-100.142,-9.33193,0	1/1:181:0,181:0:0:181:6444:-578.213,-54.4864,0	1/1:161:1,160:1:36:160:5752:-512.899,-44.868,0	0/1:23:9,14:9:320:14:504:-38.6874,0,-22.2153	1/1:183:0,183:0:0:183:6538:-586.68,-55.0885,0	1/1:271:0,271:0:0:271:9678:-868.411,-81.5791,0	0/1:150:85,65:85:2974:65:2328:-164.196,0,-222.048	1/1:122:0,122:0:0:122:4356:-391.341,-36.7257,0	0/1:223:97,126:97:3347:126:4494:-335.486,0,-234.128	0/1:242:173,69:173:6097:69:2472:-149.019,0,-475.611	1/1:70:0,70:0:0:70:2496:-223.889,-21.0721,0	1/1:155:2,153:2:72:153:5469:-484.765,-39.8229,0	0/1:53:33,20:33:1180:20:720:-48.82,0,-90.5162	0/1:32:12,20:12:420:20:720:-55.2186,0,-28.4853	1/1:129:0,129:0:0:129:4605:-413.973,-38.8329,0	0/1:56:36,20:36:1257:20:720:-48.204,0,-96.5074	1/1:315:0,315:0:0:315:11201:-1005.04,-94.8245,0	1/1:273:0,273:0:0:273:9797:-878.016,-82.1812,0	0/1:266:135,131:135:4708:131:4670:-339.652,0,-342.339	1/1:174:0,174:0:0:174:6195:-556.891,-52.3792,0	1/1:37:0,37:0:0:37:1328:-119.59,-11.1381,0	1/1:146:0,146:0:0:146:5223:-468.561,-43.9504,0	0/1:194:102,92:102:3590:92:3266:-235.04,0,-264.404	0/1:301:120,181:120:4187:181:6469:-489.046,0,-286.146	0/1:72:38,34:38:1360:34:1209:-87.1866,0,-101.006	0/1:98:49,49:49:1756:49:1760:-128.654,0,-128.543	0/1:46:24,22:24:852:22:792:-57.2157,0,-63.0289	0/1:157:86,71:86:3052:71:2546:-180.807,0,-227.502	1/1:29:0,29:0:0:29:1044:-94.0605,-8.72987,0	1/1:94:1,93:1:36:93:3344:-297.047,-24.6985,0	1/1:91:0,91:0:0:91:3264:-292.479,-27.3937,0	0/1:71:40,31:40:1428:31:1112:-78.8628,0,-106.632	0/1:152:75,77:75:2638:77:2753:-201.887,0,-191.717	0/1:73:48,25:48:1708:25:885:-57.8157,0,-131.875	1/1:202:0,202:0:0:202:7208:-647.11,-60.8081,0	1/1:112:0,112:0:0:112:4020:-359.144,-33.7154,0
chr07	22509271	.	C	A	195331	PASS	AB=0.51987;ABP=28.2943;AC=134;AF=0.712766;AN=188;AO=9475;CIGAR=1X;DP=13025;DPB=13025;DPRA=0;EPP=20577.7;EPPR=7705.22;GTI=0;LEN=1;MEANALT=1.03191;MQM=53.1162;MQMR=58.8252;NS=94;NUMALT=1;ODDS=1.9336;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=338819;QR=126537;RO=3547;RPL=9475;RPP=20577.7;RPPR=7705.22;RPR=0;RUN=1;SAF=0;SAP=20577.7;SAR=9475;SRF=0;SRP=7705.22;SRR=3547;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:109:62,47:62:2213:47:1684:-118.648,0,-166.473	0/1:117:53,64:53:1848:64:2262:-168.269,0,-130.911	0/1:276:136,140:136:4794:140:5011:-366.611,0,-348.423	0/1:307:150,157:150:5328:157:5618:-411.213,0,-386.884	1/1:94:0,94:0:0:94:3346:-300.018,-28.2968,0	1/1:82:0,82:0:0:82:2935:-263.736,-24.6845,0	1/1:196:0,196:0:0:196:6968:-625.643,-59.0019,0	0/1:215:92,123:92:3308:123:4394:-330.302,0,-233.043	1/1:187:0,187:0:0:187:6656:-597.683,-56.2926,0	0/1:93:49,44:49:1764:44:1565:-112.879,0,-130.913	1/1:81:0,81:0:0:81:2904:-260.42,-24.3834,0	1/1:126:0,126:0:0:126:4498:-403.275,-37.9298,0	0/1:84:33,51:33:1188:51:1827:-138.752,0,-81.8001	0/1:105:45,60:45:1620:60:2124:-159.422,0,-113.688	0/1:92:49,43:49:1749:43:1544:-110.914,0,-129.967	1/1:102:0,102:0:0:102:3657:-328.874,-30.7051,0	1/1:59:0,59:0:0:59:2120:-190.752,-17.7608,0	1/1:40:0,40:0:0:40:1436:-129.074,-12.0412,0	0/1:42:24,18:24:864:18:644:-45.5746,0,-65.4174	0/1:133:73,60:73:2594:60:2141:-152.413,0,-193.281	1/1:208:0,208:0:0:208:7398:-663.5,-62.6142,0	0/1:169:91,78:91:3245:78:2789:-199.587,0,-241.317	1/1:176:0,176:0:0:176:6299:-563.538,-52.9813,0	0/1:137:66,71:66:2357:71:2537:-186.127,0,-170.861	0/1:152:69,82:69:2472:82:2946:-218.419,0,-176.847	0/1:399:193,206:193:6895:206:7375:-540.884,0,-499.75	1/1:414:0,414:0:0:414:14822:-1330.56,-124.626,0	1/1:43:0,43:0:0:43:1540:-138.262,-12.9443,0	0/1:375:128,247:128:4557:247:8861:-681.109,0,-296.634	1/1:186:6,180:6:216:180:6457:-559.645,-36.2011,0	1/1:200:2,198:2:72:198:7047:-625.863,-53.3701,0	0/1:4:2,2:2:72:2:72:-5.62291,0,-5.6326	1/1:49:0,49:0:0:49:1737:-156.353,-14.7505,0	1/1:10:0,10:0:0:10:345:-31.3504,-3.0103,0	0/1:21:10,11:10:356:11:396:-29.6192,0,-26.0596	0/1:41:20,21:20:720:21:752:-55.5963,0,-52.7865	0/1:213:102,111:102:3638:111:3972:-292.516,0,-262.161	0/1:149:69,80:69:2465:80:2851:-211.298,0,-177.193	0/1:51:21,30:21:752:30:1080:-81.9574,0,-52.5475	0/1:9:5,4:5:180:4:144:-10.5855,0,-13.8428	0/1:184:75,109:75:2684:109:3912:-295.453,0,-186.38	0/1:42:26,16:26:936:16:575:-39.1395,0,-71.5549	0/1:261:118,143:118:4210:143:5086:-378.218,0,-300.416	0/1:63:31,32:31:1116:32:1148:-84.0476,0,-80.2324	0/1:69:32,37:32:1118:37:1332:-98.9705,0,-80.1406	1/1:202:0,202:0:0:202:7212:-646.71,-60.8081,0	1/1:153:0,153:0:0:153:5460:-490.299,-46.0576,0	0/1:250:115,135:115:4105:135:4841:-359.229,0,-294.04	1/1:123:0,123:0:0:123:4401:-395.076,-37.0267,0	0/1:168:81,87:81:2912:87:3098:-227.929,0,-211.664	0/1:195:61,134:61:2192:134:4820:-374.041,0,-138.786	0/1:30:10,20:10:360:20:690:-53.2117,0,-23.7093	0/1:217:94,123:94:3356:123:4394:-329.793,0,-236.886	1/1:122:0,122:0:0:122:4328:-388.064,-36.7257,0	0/1:20:10,10:10:356:10:356:-26.3289,0,-26.3606	0/1:243:109,134:109:3920:134:4797:-357.207,0,-279.599	0/1:80:41,39:41:1476:39:1396:-101.622,0,-108.993	0/1:23:11,12:11:392:12:432:-32.0485,0,-28.6678	1/1:32:0,32:0:0:32:1152:-103.729,-9.63296,0	1/1:182:0,182:0:0:182:6506:-583.838,-54.7875,0	1/1:162:1,161:1:36:161:5787:-515.917,-45.169,0	0/1:23:9,14:9:324:14:504:-38.6874,0,-22.5785	1/1:182:0,182:0:0:182:6495:-582.809,-54.7875,0	1/1:278:0,278:0:0:278:9976:-895.201,-83.6863,0	0/1:148:85,63:85:3011:63:2268:-159.397,0,-226.434	1/1:123:0,123:0:0:123:4398:-394.955,-37.0267,0	0/1:226:100,126:100:3566:126:4515:-336.471,0,-252.872	0/1:245:176,69:176:6272:69:2465:-147.483,0,-490.39	1/1:72:0,72:0:0:72:2580:-231.4,-21.6742,0	1/1:158:1,157:1:36:157:5587:-498.613,-43.9645,0	0/1:52:33,19:33:1184:19:684:-45.8906,0,-91.1778	0/1:32:12,20:12:428:20:712:-54.5874,0,-29.2096	1/1:132:0,132:0:0:132:4752:-427.163,-39.736,0	0/1:57:37,20:37:1313:20:720:-47.903,0,-101.204	1/1:313:0,313:0:0:313:11155:-1000.81,-94.2224,0	1/1:273:0,273:0:0:273:9771:-875.819,-82.1812,0	0/1:271:139,131:139:4958:131:4693:-340.149,0,-363.475	1/1:174:0,174:0:0:174:6226:-559.518,-52.3792,0	1/1:38:0,38:0:0:38:1364:-122.825,-11.4391,0	1/1:149:0,149:0:0:149:5303:-475.734,-44.8535,0	0/1:199:103,95:103:3655:95:3393:-244.895,0,-269.072	0/1:304:123,181:123:4349:181:6474:-488.551,0,-299.718	0/1:73:38,35:38:1368:35:1256:-91.1076,0,-101.425	0/1:100:50,50:50:1770:50:1796:-131.284,0,-129.239	0/1:47:25,22:25:885:22:792:-56.9147,0,-65.6921	0/1:160:87,73:87:3124:73:2609:-185.12,0,-233.045	1/1:30:0,30:0:0:30:1080:-97.1928,-9.0309,0	1/1:96:0,96:0:0:96:3429:-308.394,-28.8989,0	1/1:88:0,88:0:0:88:3164:-284.184,-26.4906,0	0/1:72:40,32:40:1421:32:1137:-80.7822,0,-106.16	0/1:154:77,77:77:2753:77:2772:-202.962,0,-201.419	0/1:72:47,25:47:1684:25:900:-59.4653,0,-130.017	1/1:206:0,206:0:0:206:7380:-662.429,-62.0122,0	1/1:111:0,111:0:0:111:3992:-356.543,-33.4143,0
chr07	22516022	.	T	C	274719	PASS	AB=0.484041;ABP=29.0709;AC=134;AF=0.712766;AN=188;AO=13551;CIGAR=1X;DP=19659;DPB=19659;DPRA=0;EPP=29411.3;EPPR=13229.5;GTI=1;LEN=1;MEANALT=1.05319;MQM=59.975;MQMR=59.9839;NS=94;NUMALT=1;ODDS=1.13716;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=482039;QR=218925;RO=6103;RPL=2;RPP=29411.3;RPPR=13229.5;RPR=13549;RUN=1;SAF=0;SAP=29428.6;SAR=13551;SRF=0;SRP=13255.5;SRR=6103;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:146:73,73:73:2620:73:2534:-184.36,0,-192.097	0/1:143:63,80:63:2253:80:2857:-214.319,0,-159.984	0/1:368:173,195:173:6208:195:6918:-511.907,0,-448.036	0/1:483:249,234:249:8956:234:8347:-605.839,0,-660.617	1/1:201:0,201:0:0:201:7174:-645.716,-60.507,0	1/1:72:0,72:0:0:72:2530:-227.948,-21.6742,0	1/1:231:1,230:1:36:230:8171:-731.809,-65.9397,0	0/1:359:191,168:191:6864:168:5937:-426.368,0,-509.756	1/1:242:0,242:0:0:242:8578:-772.018,-72.8493,0	0/1:187:101,86:101:3605:86:3080:-221.136,0,-268.349	1/1:40:0,40:0:0:40:1420:-128.097,-12.0412,0	1/1:115:0,115:0:0:115:4085:-367.837,-34.6185,0	0/1:82:48,34:48:1724:34:1208:-84.3416,0,-130.761	0/1:67:28,39:28:1004:39:1396:-105.77,0,-70.5069	0/1:78:50,28:50:1800:28:985:-65.4812,0,-138.802	1/1:47:0,47:0:0:47:1671:-150.677,-14.1484,0	1/1:74:0,74:0:0:74:2633:-237.216,-22.2762,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	0/1:27:11,16:11:396:16:568:-43.3241,0,-27.8549	0/1:713:322,391:322:11560:391:13921:-1038.03,0,-825.618	1/1:436:0,436:0:0:436:15488:-1393.59,-131.249,0	0/1:584:388,196:388:13932:196:7003:-454.527,0,-1077.84	1/1:497:0,497:0:0:497:17680:-1589.63,-149.612,0	0/1:183:78,105:78:2808:105:3726:-280.452,0,-197.87	0/1:198:94,104:94:3380:104:3736:-276.836,0,-244.81	0/1:635:335,300:335:12002:300:10713:-772.923,0,-888.868	1/1:776:2,774:2:72:774:27561:-2472.84,-226.763,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:676:326,350:326:11711:350:12484:-919.898,0,-850.185	1/1:313:7,306:7:252:306:10884:-956.432,-71.1934,0	1/1:449:1,448:1:36:448:15887:-1425.93,-131.564,0	0/1:22:15,7:15:532:7:244:-15.6768,0,-41.5904	1/1:63:1,62:1:36:62:2198:-194.484,-15.3666,0	1/1:9:0,9:0:0:9:309:-28.1407,-2.70927,0	0/1:16:10,6:10:360:6:212:-14.6083,0,-27.9278	0/1:48:12,36:12:428:36:1277:-100.783,0,-24.4094	0/1:208:131,77:131:4687:77:2716:-182.066,0,-359.376	0/1:260:152,108:152:5448:108:3857:-269.058,0,-412.18	0/1:35:20,15:20:720:15:540:-38.4005,0,-54.5927	0/1:16:10,6:10:360:6:216:-14.974,0,-27.9278	0/1:458:216,242:216:7756:242:8654:-640.982,0,-560.196	0/1:26:13,13:13:468:13:460:-33.9086,0,-34.6329	0/1:496:223,273:223:7974:273:9755:-728.589,0,-568.369	0/1:69:45,24:45:1611:24:852:-56.2293,0,-124.508	0/1:57:30,27:30:1080:27:963:-69.8272,0,-80.3545	1/1:246:0,246:0:0:246:8755:-787.929,-74.0534,0	1/1:294:1,293:1:36:293:10422:-934.284,-84.9045,0	0/1:415:222,193:222:7949:193:6906:-496.665,0,-590.504	1/1:276:0,276:0:0:276:9802:-882.106,-83.0843,0	0/1:342:138,204:138:4952:204:7261:-550.59,0,-342.876	0/1:367:187,180:187:6689:180:6424:-467.769,0,-491.607	0/1:29:13,16:13:460:16:576:-43.4451,0,-33.0055	0/1:175:98,77:98:3520:77:2751:-195.151,0,-264.328	1/1:398:0,396:0:0:396:14132:-1271.36,-119.208,0	0/1:22:14,8:14:491:8:279:-18.8249,0,-37.8985	0/1:401:172,229:172:6176:229:8162:-613.882,0,-435.223	0/1:134:65,69:65:2340:69:2443:-179.788,0,-170.521	0/1:40:26,14:26:936:14:496:-32.9331,0,-72.5183	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	1/1:176:2,174:2:72:174:6149:-546.67,-46.1446,0	1/1:66:1,65:1:36:65:2318:-205.281,-16.2697,0	0/1:38:15,23:15:536:23:828:-63.405,0,-37.1357	1/1:89:0,89:0:0:89:3162:-284.804,-26.7917,0	1/1:507:4,503:4:144:503:17893:-1596.67,-139.309,0	0/1:179:96,83:96:3436:83:2928:-209.871,0,-255.569	1/1:200:1,199:1:36:199:7086:-634.205,-56.6077,0	0/1:505:264,241:264:9480:241:8553:-617.749,0,-701.134	0/1:372:229,142:229:8220:142:5070:-344.403,0,-627.61	1/1:32:0,32:0:0:32:1143:-103.179,-9.63296,0	1/1:119:1,118:1:36:118:4193:-373.525,-32.2243,0	0/1:59:31,28:31:1112:28:989:-71.5621,0,-82.6306	0/1:33:10,23:10:360:23:828:-64.9101,0,-22.8103	1/1:297:2,295:2:72:295:10527:-940.51,-82.5692,0	0/1:209:107,102:107:3840:102:3644:-265.25,0,-282.88	1/1:438:0,438:0:0:438:15542:-1398.5,-131.851,0	1/1:347:0,346:0:0:346:12338:-1109.89,-104.156,0	0/1:286:159,127:159:5699:127:4548:-323.392,0,-426.932	1/1:165:2,163:2:72:163:5771:-512.669,-42.8332,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:274:0,273:0:0:273:9717:-874.124,-82.1812,0	0/1:409:194,215:194:6957:215:7677:-567.844,0,-503.025	0/1:562:290,272:290:10409:272:9671:-701.15,0,-767.545	0/1:70:43,27:43:1548:27:955:-65.1928,0,-118.541	0/1:86:37,49:37:1324:49:1752:-132.072,0,-93.5735	0/1:60:37,23:37:1332:23:824:-56.4215,0,-102.121	0/1:123:74,49:74:2655:49:1719:-117.965,0,-202.168	1/1:25:0,25:0:0:25:887:-80.1481,-7.52575,0	1/1:57:0,57:0:0:57:1967:-177.301,-17.1587,0	1/1:83:0,83:0:0:83:2925:-263.486,-24.9855,0	0/1:46:29,17:29:1036:17:596:-40.1204,0,-79.7065	0/1:61:39,22:39:1385:22:769:-51.1658,0,-106.584	0/1:117:81,36:81:2900:36:1268:-79.1995,0,-226.015	1/1:59:0,59:0:0:59:2088:-188.188,-17.7608,0	1/1:77:0,77:0:0:77:2689:-242.252,-23.1793,0
chr07	22576331	.	C	T	47027.8	PASS	AB=0.486949;ABP=11.5689;AC=54;AF=0.287234;AN=188;AO=2831;CIGAR=1X;DP=9648;DPB=9648;DPRA=1.22225;EPP=6150.45;EPPR=14786.4;GTI=0;LEN=1;MEANALT=1.01538;MQM=59.9753;MQMR=59.9891;NS=94;NUMALT=1;ODDS=3.24675;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101088;QR=242702;RO=6816;RPL=2830;RPP=6141.77;RPPR=14786.4;RPR=1;RUN=1;SAF=2830;SAP=6141.77;SAR=1;SRF=6816;SRP=14803.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:19,5:19:684:5:180:-9.32734,0,-54.6656	0/1:140:65,75:65:2327:75:2683:-199.57,0,-167.545	0/1:84:45,39:45:1620:39:1400:-101.013,0,-120.803	0/1:125:65,60:65:2312:60:2152:-156.318,0,-170.712	0/0:40:39,1:39:1396:1:36:0,-8.44292,-122.341	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/0:107:106,1:106:3749:1:36:0,-28.6119,-334.011	0/1:207:124,83:124:4383:83:2977:-205.849,0,-332.33	0/0:69:69,0:69:2424:0:0:0,-20.7711,-218.413	0/1:116:72,44:72:2569:44:1545:-104.419,0,-196.539	0/0:97:97,0:97:3467:0:0:0,-29.1999,-312.242	0/0:63:63,0:63:2227:0:0:0,-18.9649,-200.694	0/1:104:57,47:57:1990:47:1660:-118.378,0,-148.063	0/1:222:109,113:109:3860:113:4026:-295.7,0,-280.768	0/1:86:49,37:49:1760:37:1323:-93.4834,0,-132.795	0/0:89:89,0:89:3153:0:0:0,-26.7917,-283.996	0/0:129:128,1:128:4559:1:36:0,-35.2346,-406.877	0/0:115:115,0:115:4080:0:0:0,-34.6184,-367.387	0/1:56:32,24:32:1148:24:851:-60.0518,0,-86.7722	0/1:146:87,59:87:3108:59:2112:-146.399,0,-235.997	0/0:124:124,0:124:4414:0:0:0,-37.3277,-397.433	0/1:98:30,68:30:1067:68:2431:-189.544,0,-66.8403	0/0:77:77,0:77:2753:0:0:0,-23.1793,-248.008	0/1:71:50,21:50:1763:21:752:-46.6331,0,-137.58	0/1:74:36,38:36:1284:38:1327:-97.4508,0,-93.5872	0/1:275:126,148:126:4460:148:5265:-391.144,0,-318.728	0/0:196:196,0:196:7001:0:0:0,-59.0019,-630.154	0/0:38:38,0:38:1351:0:0:0,-11.4391,-121.89	0/1:154:76,78:76:2719:78:2799:-205.754,0,-198.594	0/0:149:148,1:148:5304:1:36:0,-41.2552,-473.896	0/0:89:87,2:87:3097:2:72:0,-19.9549,-272.12	0/1:10:1,9:1:36:9:316:-25.7686,0,-0.587975	0/0:11:11,0:11:377:0:0:0,-3.31133,-34.2579	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/1:24:10,14:10:360:14:495:-37.6583,0,-25.5196	0/1:215:119,96:119:4228:96:3408:-242.213,0,-315.979	0/1:233:139,94:139:4956:94:3369:-233.284,0,-376.049	0/1:95:54,41:54:1931:41:1472:-104.178,0,-145.468	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/1:134:68,66:68:2422:66:2357:-172.049,0,-177.897	0/1:41:20,21:20:704:21:752:-55.664,0,-51.3423	0/1:146:65,81:65:2309:81:2898:-217.1,0,-164.119	0/1:112:57,55:57:2035:55:1980:-144.759,0,-149.706	0/1:77:35,42:35:1252:42:1492:-111.395,0,-89.8058	0/0:111:111,0:111:3938:0:0:0,-33.4143,-354.612	0/0:85:85,0:85:3026:0:0:0,-25.5875,-272.57	0/1:200:118,82:118:4219:82:2933:-203.998,0,-319.684	0/0:156:156,0:156:5553:0:0:0,-46.9607,-499.896	0/1:151:83,68:83:2942:68:2427:-173.23,0,-219.559	0/1:111:46,65:46:1644:65:2321:-175.734,0,-114.834	0/1:16:7,9:7:244:9:320:-24.3259,0,-17.4829	0/1:132:62,70:62:2196:70:2491:-184.705,0,-158.167	0/0:48:48,0:48:1708:0:0:0,-14.4494,-154.006	0/1:19:10,9:10:356:9:319:-23.3318,0,-26.6617	0/1:137:67,70:67:2400:70:2511:-185,0,-175.016	0/1:14:7,7:7:244:7:252:-18.8145,0,-18.085	0/1:11:7,4:7:248:4:144:-10.0023,0,-19.3529	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:100:100,0:100:3561:0:0:0,-30.103,-320.698	0/0:184:182,2:182:6503:2:72:0,-48.5528,-578.146	0/1:15:5,10:5:172:10:360:-28.2289,0,-11.3025	0/0:148:147,1:147:5243:1:36:0,-40.9542,-468.408	0/0:222:222,0:222:7911:0:0:0,-66.8287,-712.003	0/1:101:58,43:58:2057:43:1548:-109.209,0,-154.996	0/0:79:78,1:78:2741:1:36:0,-20.1831,-243.333	0/1:119:66,53:66:2353:53:1880:-133.648,0,-176.205	0/1:77:15,62:15:536:62:2205:-175.534,0,-25.3955	0/0:72:71,1:71:2517:1:36:0,-18.0759,-223.183	0/0:82:82,0:82:2924:0:0:0,-24.6845,-263.396	0/1:136:77,59:77:2740:59:2115:-149.661,0,-205.848	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/0:96:96,0:96:3431:0:0:0,-28.8989,-308.995	0/1:68:29,39:29:1044:39:1404:-106.189,0,-73.8048	0/0:166:166,0:166:5922:0:0:0,-49.971,-533.087	0/0:113:113,0:113:4029:0:0:0,-34.0164,-362.798	0/1:142:73,69:73:2572:69:2480:-180.707,0,-188.983	0/0:176:174,2:174:6212:2:72:0,-46.1446,-552.339	0/0:7:7,0:7:244:0:0:0,-2.10721,-22.2994	0/0:94:94,0:94:3348:0:0:0,-28.2968,-301.536	0/1:104:50,54:50:1791:54:1927:-142.399,0,-130.165	0/1:164:82,82:82:2917:82:2940:-215.465,0,-213.396	0/1:140:70,70:70:2512:70:2502:-183.285,0,-184.188	0/1:143:74,69:74:2636:69:2456:-178.248,0,-194.438	0/1:129:52,77:52:1833:77:2752:-209.088,0,-126.416	0/1:183:110,73:110:3916:73:2617:-180.689,0,-297.544	0/0:58:58,0:58:2066:0:0:0,-17.4597,-186.21	0/0:91:91,0:91:3251:0:0:0,-27.3937,-292.811	0/0:121:121,0:121:4286:0:0:0,-36.4246,-385.916	0/1:97:46,51:46:1648:51:1828:-135.601,0,-119.409	0/1:182:87,95:87:3111:95:3364:-248.06,0,-225.429	0/1:93:34,59:34:1224:59:2106:-161.813,0,-82.4713	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.955	0/0:110:109,1:109:3878:1:36:0,-29.515,-345.617
chr07	22636750	.	A	G	94496.9	PASS	AB=0.522843;ABP=40.5095;AC=54;AF=0.287234;AN=188;AO=4352;CIGAR=1X;DP=13704;DPB=13704;DPRA=1.27948;EPP=9306.17;EPPR=20271.5;GTI=0;LEN=1;MEANALT=1.02941;MQM=47.8274;MQMR=59.6611;NS=94;NUMALT=1;ODDS=0.910164;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=154134;QR=332899;RO=9350;RPL=2321;RPP=44.9728;RPPR=47.9726;RPR=2031;RUN=1;SAF=2338;SAP=55.3891;SAR=2014;SRF=4459;SRP=46.3524;SRR=4891;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:47,26:47:1684:26:920:-56.2721,0,-129.854	0/1:165:78,87:78:2792:87:3094:-219.264,0,-201.816	0/1:176:85,91:85:3029:91:3230:-225.124,0,-219.857	0/1:367:159,208:159:5665:208:7367:-528.458,0,-399.448	0/0:117:116,1:116:4152:1:36:0,-31.8744,-369.757	0/0:35:35,0:35:1248:0:0:0,-10.536,-112.605	0/0:258:254,4:254:9048:4:129:0,-66.0674,-802.602	0/1:194:102,92:102:3609:92:3228:-226.259,0,-266.618	0/0:158:157,1:157:5544:1:36:0,-43.9645,-495.372	0/1:132:75,57:75:2688:57:2023:-137.335,0,-202.407	0/0:106:106,0:106:3771:0:0:0,-31.9092,-339.563	0/0:138:138,0:138:4900:0:0:0,-41.5421,-440.963	0/1:163:71,92:71:2535:92:3272:-228.85,0,-179.263	0/1:99:50,49:50:1762:49:1739:-121.876,0,-129.032	0/1:132:64,68:64:2267:68:2411:-173.273,0,-164.554	0/0:94:94,0:94:3356:0:0:0,-28.2968,-302.221	0/0:102:102,0:102:3644:0:0:0,-30.7051,-328.148	0/0:69:69,0:69:2446:0:0:0,-20.7711,-220.352	0/1:62:25,37:25:896:37:1290:-89.4226,0,-62.2612	0/1:293:141,152:141:5032:152:5380:-379.523,0,-364.74	0/0:200:200,0:200:7113:0:0:0,-60.206,-639.957	0/1:94:22,72:22:775:72:2572:-198.743,0,-41.772	0/0:143:142,1:142:5088:1:36:0,-39.8597,-454.842	0/1:148:78,70:78:2783:70:2499:-170.472,0,-206.137	0/1:130:70,60:70:2520:60:2131:-145.557,0,-187.863	0/1:442:238,203:238:8449:203:7137:-499.485,0,-627.229	0/0:345:345,0:345:12296:0:0:0,-103.855,-1105.94	0/0:63:63,0:63:2253:0:0:0,-18.9649,-203.021	0/1:398:181,217:181:6457:217:7722:-556.967,0,-461.391	0/0:190:184,6:184:6600:6:208:0,-39.3284,-575.935	0/0:172:170,2:170:6069:2:72:0,-45.243,-539.643	0/1:13:6,7:6:212:7:252:-18.3785,0,-15.2803	0/0:28:28,0:28:996:0:0:0,-8.42884,-89.9549	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:18:11,7:11:392:7:243:-14.2384,0,-30.2015	0/1:58:25,33:25:896:33:1170:-78.2517,0,-63.3102	0/1:308:157,151:157:5605:151:5400:-384.066,0,-411.674	0/1:170:74,96:74:2629:96:3394:-243.78,0,-185.671	0/1:103:55,48:55:1968:48:1681:-112.007,0,-146.368	0/1:13:5,8:5:176:8:288:-19.9453,0,-12.2608	0/1:243:139,104:139:4923:104:3678:-243.082,0,-369.822	0/1:71:37,34:37:1320:34:1220:-83.3073,0,-97.7288	0/1:283:141,142:141:5041:142:5008:-340.424,0,-368.208	0/1:138:74,64:74:2603:64:2246:-155.805,0,-192.94	0/1:119:68,51:68:2432:51:1811:-123.367,0,-183.295	0/0:132:131,1:131:4679:1:36:0,-36.1377,-417.52	0/0:126:126,0:126:4463:0:0:0,-37.9298,-401.81	0/1:209:97,112:97:3449:112:3943:-281.366,0,-247.707	0/0:141:141,0:141:5039:0:0:0,-42.4452,-453.621	0/1:221:92,129:92:3289:129:4587:-333.973,0,-229.417	0/1:214:94,120:94:3359:120:4206:-306.549,0,-238.103	0/1:10:4,6:4:140:6:212:-16.2544,0,-9.93428	0/1:197:82,115:82:2901:115:4071:-286.48,0,-201.577	0/0:61:61,0:61:2171:0:0:0,-18.3628,-195.656	0/1:18:7,11:7:248:11:396:-27.6912,0,-17.2457	0/1:281:145,136:145:5183:136:4855:-326.289,0,-381.935	0/1:80:34,46:34:1212:46:1640:-118.498,0,-85.2977	0/1:26:16,10:16:572:10:360:-24.8105,0,-43.9866	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:101:101,0:101:3592:0:0:0,-30.404,-323.392	0/0:141:139,1:139:4958:1:32:0,-39.2647,-443.128	0/1:8:1,7:1:27:7:252:-20.3013,0,-0.291543	0/0:226:226,0:226:7999:0:0:0,-68.0328,-719.629	0/0:246:246,0:246:8680:0:0:0,-74.0534,-781.179	0/1:109:48,61:48:1720:61:2153:-153.54,0,-122.263	0/0:142:141,1:141:5048:1:36:0,-39.3227,-451.021	0/1:297:140,157:140:4968:157:5597:-394.827,0,-357.7	0/1:131:47,84:47:1684:84:2995:-218.757,0,-112.412	0/0:74:73,1:73:2620:1:36:0,-18.9301,-232.647	0/0:76:76,0:76:2699:0:0:0,-22.8783,-243.147	0/1:102:41,61:41:1467:61:2160:-160.3,0,-101.62	0/1:25:9,16:9:320:16:560:-42.9738,0,-21.6166	0/0:121:119,2:119:4227:2:72:0,-29.9409,-374.097	0/1:118:53,65:53:1891:65:2304:-161.856,0,-134.928	0/0:231:231,0:231:8198:0:0:0,-69.5379,-737.585	0/0:245:245,0:245:8717:0:0:0,-73.7523,-784.5	0/1:172:82,90:82:2923:90:3194:-221.212,0,-211.51	0/0:169:167,2:167:5956:2:72:0,-44.3719,-529.544	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/0:218:216,2:216:7664:2:72:0,-59.0509,-683.19	0/1:128:81,47:81:2900:47:1677:-100.663,0,-222.676	0/1:305:144,161:144:5127:161:5671:-402.682,0,-369.675	0/1:119:56,63:56:1993:63:2187:-157.575,0,-143.799	0/1:123:58,65:58:2067:65:2278:-161.018,0,-149.257	0/1:140:59,81:59:2063:81:2857:-210.486,0,-143.777	0/1:243:113,130:113:4029:130:4605:-330.797,0,-289.627	0/0:53:53,0:53:1878:0:0:0,-15.9546,-169.294	0/0:113:113,0:113:3983:0:0:0,-34.0164,-358.606	0/0:115:115,0:115:4084:0:0:0,-34.6184,-367.709	0/1:81:37,44:37:1328:44:1562:-110.181,0,-95.4282	0/1:175:86,89:86:3079:89:3146:-217.896,0,-224.627	0/1:137:43,94:43:1529:94:3351:-250.091,0,-96.66	0/0:242:241,1:241:8569:1:36:0,-69.4257,-766.663	0/0:180:180,0:180:6427:0:0:0,-54.1854,-578.466
chr07	22636759	.	GAAT	AGAT,AGAC	361767	PASS	AB=0.469874,0.522386;ABP=69.2136,39.5659;AC=134,54;AF=0.712766,0.287234;AN=188;AO=9353,4411;CIGAR=2X2M,2X1M1X;DP=13886;DPB=13898;DPRA=0,1.28463;EPP=20312.8,9581.38;EPPR=0;GTI=1;LEN=2,4;MEANALT=2.79787,3.11765;MQM=59.6792,47.8311;MQMR=0;NS=94;NUMALT=2;ODDS=0.186661;PAIRED=0,0;PAIREDR=0;PAO=0,7;PQA=0,244;PQR=0;PRO=0;QA=328054,155431;QR=0;RO=0;RPL=4443,2344;RPP=53.6437,40.7829;RPPR=0;RPR=4910,2067;RUN=1,1;SAF=4443,2344;SAP=53.6437,40.7829;SAR=4910,2067;SRF=0;SRP=0;SRR=0;TYPE=mnp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:76:0,49,27:0:0:49,27:1722,964:-214.216,-74.0634,-59.313,-140.495,0,-132.367	1/2:169:0,78,90:0:0:78,90:2749,3159:-472.132,-248.342,-224.861,-223.817,0,-196.724	1/2:185:0,86,96:0:0:86,96:3009,3366:-505.572,-260.764,-234.875,-244.884,0,-215.985	1/2:372:0,159,212:0:0:159,212:5589,7495:-1041.59,-586.713,-538.849,-454.868,0,-391.05	1/1:117:0,116,1:0:0:116,1:4089,36:-367.532,-34.9195,0,-364.821,-31.8744,-364.52	1/1:35:0,35,0:0:0:35,0:1241,0:-111.969,-10.5361,0,-111.969,-10.5361,-111.969	1/1:260:0,252,3:0:0:252,3:8828,98:-794.103,-75.8596,0,-786.523,-68.2791,-785.62	1/2:200:0,106,94:0:0:106,94:3671,3317:-560.88,-262.591,-230.682,-298.634,0,-270.337	1/1:160:0,157,1:0:0:157,1:5567,36:-500.696,-47.2617,0,-497.758,-44.3043,-497.457	1/2:139:0,80,57:0:0:80,57:2772,1968:-380.171,-154.884,-130.801,-225.269,0,-208.11	1/1:106:0,104,0:0:0:104,0:3645,0:-327.884,-31.3071,0,-327.884,-31.3071,-327.884	1/1:137:0,136,0:0:0:136,0:4805,0:-432.292,-40.9401,0,-432.292,-40.9401,-432.292	1/2:165:0,72,90:0:0:72,90:2530,3218:-451.271,-245.396,-223.722,-205.94,0,-178.847	1/2:101:0,50,51:0:0:50,51:1734,1808:-283.417,-142.482,-127.43,-141.28,0,-125.928	1/2:131:0,64,65:0:0:64,65:2254,2305:-367.834,-184.327,-165.061,-183.537,0,-163.97	1/1:92:0,90,0:0:0:90,0:3156,0:-283.885,-27.0927,0,-283.885,-27.0927,-283.885	1/1:102:0,102,0:0:0:102,0:3586,0:-322.932,-30.7051,0,-322.932,-30.7051,-322.932	1/1:71:0,70,0:0:0:70,0:2457,0:-221.097,-21.0721,0,-221.097,-21.0721,-221.097	1/2:59:0,25,33:0:0:25,33:893,1162:-159.143,-86.3574,-78.8316,-72.803,0,-62.869	1/2:294:0,140,154:0:0:140,154:4889,5373:-819.357,-421.707,-379.563,-397.993,0,-351.635	1/1:201:0,200,0:0:0:200,0:7041,0:-633.465,-60.206,0,-633.465,-60.206,-633.465	1/2:99:0,24,75:0:0:24,75:858,2662:-282.693,-212.737,-205.512,-70.3114,0,-47.7341	1/1:147:0,145,1:0:0:145,1:5101,36:-458.866,-43.6494,0,-456.298,-41.1021,-455.997	1/2:146:0,80,66:0:0:80,66:2819,2331:-410.076,-180.583,-156.5,-229.837,0,-209.969	1/2:129:0,68,61:0:0:68,61:2400,2157:-363.736,-168.331,-147.86,-195.392,0,-177.029	1/2:451:0,235,210:0:0:235,210:8148,7305:-1247.17,-584.936,-514.194,-662.237,0,-599.021	1/1:349:0,346,0:0:0:346,0:12008,0:-1080.18,-104.156,0,-1080.18,-104.156,-1080.18	1/1:65:0,65,0:0:0:65,0:2270,0:-204.551,-19.567,0,-204.551,-19.567,-204.551	1/2:415:0,183,232:0:0:183,232:6423,8161:-1168.91,-646.202,-591.114,-523.059,0,-453.22	1/1:194:0,185,6:0:0:185,6:6498,216:-584.31,-55.6906,0,-567.856,-39.2218,-566.05	1/1:174:0,171,2:0:0:171,2:6005,70:-539.97,-51.4761,0,-534.519,-46.0402,-533.917	1/2:12:0,6,6:0:0:6,6:214,214:-34.368,-17.146,-15.3398,-17.5705,0,-15.7643	1/1:29:0,29,0:0:0:29,0:1008,0:-91.0287,-8.72987,0,-91.0287,-8.72987,-91.0287	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/2:21:0,12,9:0:0:12,9:432,301:-57.2965,-22.0142,-18.4019,-35.6088,0,-32.8996	1/2:56:0,26,29:0:0:26,29:924,1024:-149.469,-74.3469,-66.5201,-75.1344,0,-66.4045	1/2:317:0,160,155:0:0:160,155:5642,5487:-897.732,-438.515,-390.35,-459.232,0,-412.573	1/2:175:0,74,101:0:0:74,101:2584,3557:-489.428,-279.241,-256.965,-210.532,0,-180.128	1/2:103:0,55,48:0:0:55,48:1931,1683:-283.983,-126.832,-110.276,-157.13,0,-142.68	1/2:13:0,5,8:0:0:5,8:180,281:-35.8693,-21.1788,-19.6736,-15.0361,0,-12.6278	1/2:247:0,140,105:0:0:140,105:4872,3710:-684.598,-288.68,-246.535,-395.993,0,-364.385	1/2:71:0,36,34:0:0:36,34:1281,1196:-196.609,-92.1993,-81.3622,-104.42,0,-94.1845	1/2:288:0,138,146:0:0:138,146:4845,5139:-787.358,-393.317,-351.775,-394.037,0,-350.086	1/2:138:0,72,64:0:0:72,64:2518,2249:-382.906,-178.055,-156.38,-204.84,0,-185.574	1/2:123:0,69,53:0:0:69,53:2404,1890:-345.513,-150.024,-129.253,-195.623,0,-179.669	1/1:133:0,130,1:0:0:130,1:4546,36:-408.881,-39.1339,0,-405.943,-36.1963,-405.642	1/1:130:0,129,0:0:0:129,0:4525,0:-407.106,-38.8329,0,-407.106,-38.8329,-407.106	1/2:212:0,97,112:0:0:97,112:3397,3894:-585.29,-308.89,-279.69,-276.506,0,-242.79	1/1:143:0,141,0:0:0:141,0:4999,0:-449.702,-42.4452,0,-449.702,-42.4452,-449.702	1/2:225:0,88,132:0:0:88,132:3122,4657:-621.359,-367.128,-340.638,-254.284,0,-214.548	1/2:217:0,93,122:0:0:93,122:3278,4301:-609.916,-343.024,-315.029,-266.954,0,-230.229	1/2:10:0,4,6:0:0:4,6:142,216:-29.3936,-17.8242,-16.6201,-11.9251,0,-10.1189	1/2:198:0,81,117:0:0:81,117:2801,4168:-546.616,-319.018,-294.635,-227.939,0,-192.719	1/1:62:0,62,0:0:0:62,0:2159,0:-194.574,-18.6639,0,-194.574,-18.6639,-194.574	1/2:19:0,8,11:0:0:8,11:269,385:-51.0177,-29.2211,-26.8129,-22.1282,0,-18.8169	1/2:284:0,145,138:0:0:145,138:5060,4831:-781.942,-370.45,-326.801,-411.541,0,-369.999	1/2:82:0,35,47:0:0:35,47:1216,1648:-228.465,-129.612,-119.076,-99.1968,0,-85.0484	1/2:26:0,15,10:0:0:15,10:531,360:-72.5175,-29.2673,-24.7518,-43.2475,0,-40.2372	1/1:19:0,19,0:0:0:19,0:682,0:-61.7099,-5.71957,0,-61.7099,-5.71957,-61.7099	1/1:100:0,99,0:0:0:99,0:3490,0:-313.936,-29.802,0,-313.936,-29.802,-313.936	1/1:148:0,147,1:0:0:147,1:5111,36:-459.653,-44.2514,0,-456.715,-40.9542,-456.414	1/2:8:0,1,7:0:0:1,7:36,251:-23.4495,-20.5112,-20.2102,-3.29724,0,-1.19003	1/1:229:0,227,0:0:0:227,0:7947,0:-714.885,-68.3338,0,-714.885,-68.3338,-714.885	1/1:248:0,244,0:0:0:244,0:8555,0:-769.618,-73.4513,0,-769.618,-73.4513,-769.618	1/2:109:0,47,62:0:0:47,62:1655,2173:-304.656,-169.925,-155.777,-135.077,0,-116.413	1/1:141:0,136,1:0:0:136,1:4711,36:-423.82,-40.9401,0,-421.04,-38.1538,-420.739	1/2:300:0,139,160:0:0:139,160:4847,5640:-834.388,-440.378,-398.535,-394.048,0,-345.883	1/2:132:0,47,85:0:0:47,85:1688,3028:-373.119,-235.413,-221.264,-138.059,0,-112.471	1/1:75:0,73,1:0:0:73,1:2611,36:-234.848,-21.9752,0,-232.138,-19.2767,-231.837	1/1:77:0,77,0:0:0:77,0:2664,0:-239.995,-23.1793,0,-239.995,-23.1793,-239.995	1/2:102:0,39,62:0:0:39,62:1328,2183:-282.025,-174.294,-162.554,-107.869,0,-89.2049	1/2:26:0,10,15:0:0:10,15:338,529:-70.1933,-42.8014,-39.7911,-27.3771,0,-22.8616	1/1:122:0,119,1:0:0:119,1:4140,36:-372.416,-35.8226,0,-369.796,-33.2055,-369.495	1/2:121:0,54,67:0:0:54,67:1888,2380:-336.753,-183.174,-166.919,-153.922,0,-133.753	1/1:233:0,233,0:0:0:233,0:8141,0:-732.473,-70.14,0,-732.473,-70.14,-732.473	1/1:248:0,245,0:0:0:245,0:8624,0:-775.852,-73.7524,0,-775.852,-73.7524,-775.852	1/2:172:0,82,89:0:0:82,89:2924,3114:-477.366,-239.018,-214.333,-238.333,0,-211.542	1/1:173:0,169,2:0:0:169,2:5951,72:-535.284,-50.8741,0,-529.726,-45.2974,-529.124	1/1:30:0,29,0:0:0:29,0:1015,0:-91.2997,-8.72987,0,-91.2997,-8.72987,-91.2997	1/1:219:0,215,2:0:0:215,2:7596,62:-683.328,-64.7215,0,-678.404,-59.8137,-677.802	1/2:130:0,82,48:0:0:82,48:2888,1702:-362.578,-127.474,-102.789,-235.441,0,-220.991	1/2:310:0,141,162:0:0:141,162:4927,5712:-849.833,-449.123,-406.678,-400.741,0,-351.974	1/2:119:0,53,64:0:0:53,64:1869,2252:-331.696,-179.52,-163.565,-152.166,0,-132.9	1/2:122:0,57,64:0:0:57,64:1998,2268:-340.011,-177.431,-160.272,-162.568,0,-143.302	1/2:140:0,58,79:0:0:58,79:1990,2797:-385.403,-223.851,-206.392,-161.538,0,-137.757	1/2:244:0,113,130:0:0:113,130:3985,4607:-689.497,-365.042,-331.026,-324.592,0,-285.458	1/1:54:0,53,0:0:0:53,0:1883,0:-169.404,-15.9546,0,-169.404,-15.9546,-169.404	1/1:111:0,110,0:0:0:110,0:3830,0:-344.499,-33.1133,0,-344.499,-33.1133,-344.499	1/1:117:0,117,0:0:0:117,0:4125,0:-371.398,-35.2205,0,-371.398,-35.2205,-371.398	1/2:81:0,35,44:0:0:35,44:1252,1569:-223.588,-121.5,-110.964,-102.079,0,-88.8338	1/2:177:0,87,90:0:0:87,90:3095,3174:-498.383,-246.169,-219.979,-252.561,0,-225.468	1/2:137:0,43,93:0:0:43,93:1531,3268:-381.467,-256.678,-243.734,-124.895,0,-96.8988	1/1:240:0,237,1:0:0:237,1:8297,36:-745.194,-71.3441,0,-742.414,-68.5664,-742.113	1/1:186:0,182,0:0:0:182,0:6409,0:-576.503,-54.7875,0,-576.503,-54.7875,-576.503
chr07	22745808	.	GTTA	ATTG	89003.1	PASS	AB=0.473343;ABP=23.9645;AC=134;AF=0.712766;AN=188;AO=3576;CIGAR=1X2M1X;DP=5385;DPB=5386.25;DPRA=0;EPP=1369.29;EPPR=934.402;GTI=0;LEN=4;MEANALT=1.23404;MQM=59.9692;MQMR=60;NS=94;NUMALT=1;ODDS=0.0290006;PAIRED=0;PAIREDR=0;PAO=5;PQA=167;PQR=0;PRO=0;QA=125474;QR=62468;RO=1785;RPL=3548;RPP=7526.9;RPPR=3707.32;RPR=28;RUN=1;SAF=2514;SAP=1283.25;SAR=1062;SRF=1320;SRP=892.31;SRR=465;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:16:8,8:8:277:8:285:-21.178,0,-20.4486	0/1:28:11,17:11:381:17:569:-43.0973,0,-26.1928	0/1:33:20,13:20:714:13:456:-31.4382,0,-54.6534	0/1:47:23,24:23:804:24:836:-61.4086,0,-58.5304	1/1:22:0,21:0:0:21:746:-67.1052,-6.32163,0	1/1:19:0,19:0:0:19:649:-58.7292,-5.71957,0	1/1:21:0,21:0:0:21:733:-66.2909,-6.32163,0	0/1:31:19,12:19:670:12:414:-28.2578,0,-51.2938	1/1:30:0,29:0:0:29:1000:-89.9492,-8.72987,0	0/1:16:8,8:8:272:8:281:-20.8137,0,-19.9928	1/1:215:0,214:0:0:214:7528:-677.213,-64.4204,0	1/1:84:0,84:0:0:84:2926:-263.575,-25.2865,0	0/1:77:46,30:46:1593:30:1058:-72.293,0,-120.419	0/1:59:26,33:26:912:33:1134:-84.6006,0,-64.6342	0/1:61:37,24:37:1287:24:855:-58.9081,0,-97.7646	1/1:60:0,60:0:0:60:2107:-189.578,-18.0618,0	1/1:38:0,38:0:0:38:1335:-120.449,-11.4391,0	1/1:28:0,28:0:0:28:974:-87.97,-8.42884,0	0/1:99:43,56:43:1500:56:1972:-147.952,0,-105.489	0/1:30:15,15:15:526:15:513:-37.4626,0,-38.6393	1/1:21:0,21:0:0:21:711:-64.3034,-6.32163,0	0/1:9:6,3:6:204:3:108:-7.3659,0,-15.9827	1/1:28:0,26:0:0:26:884:-79.5711,-7.82678,0	0/1:17:11,5:11:394:5:179:-11.3343,0,-30.6803	0/1:19:10,9:10:360:9:311:-22.6039,0,-27.0247	0/1:48:25,23:25:869:23:789:-56.8746,0,-64.0753	1/1:47:0,46:0:0:46:1608:-144.647,-13.8474,0	1/1:29:0,29:0:0:29:1015:-91.6606,-8.72987,0	0/1:33:19,13:19:662:13:458:-31.5611,0,-49.9105	1/1:12:1,11:1:29:11:396:-33.0831,-0.712704,0	1/1:33:1,32:1:36:32:1128:-98.2296,-6.33572,0	0/1:73:39,34:39:1380:34:1193:-85.699,0,-102.523	1/1:123:0,122:0:0:122:4307:-387.432,-36.7257,0	1/1:142:0,141:0:0:141:4885:-439.524,-42.4452,0	0/1:244:129,114:129:4523:114:3984:-285.276,0,-333.764	0/1:213:108,105:108:3770:105:3705:-269.535,0,-275.384	0/1:133:69,64:69:2456:64:2280:-165.419,0,-181.258	0/1:12:6,6:6:214:6:216:-16.1782,0,-15.9955	0/1:139:65,74:65:2233:74:2598:-192.227,0,-159.388	0/1:127:67,60:67:2336:60:2128:-153.557,0,-172.269	0/1:36:21,15:21:722:15:525:-36.7425,0,-54.4599	0/1:69:36,33:36:1275:33:1188:-86.4529,0,-94.2818	0/1:40:18,21:18:643:21:700:-51.212,0,-46.1008	0/1:77:43,34:43:1519:34:1166:-82.0614,0,-113.823	0/1:38:22,16:22:774:16:575:-40.6455,0,-58.5422	1/1:18:0,17:0:0:17:594:-53.5303,-5.11751,0	1/1:12:0,12:0:0:12:423:-38.4055,-3.61236,0	0/1:41:23,18:23:817:18:646:-46.1292,0,-61.5099	1/1:17:0,17:0:0:17:604:-54.69,-5.11751,0	0/1:22:8,14:8:280:14:502:-38.8946,0,-18.9161	0/1:17:11,6:11:389:6:206:-13.758,0,-30.2301	0/1:96:46,50:46:1614:50:1789:-132.394,0,-116.648	0/1:32:16,16:16:563:16:571:-42.0904,0,-41.367	1/1:15:0,15:0:0:15:538:-48.7558,-4.51545,0	0/1:32:22,10:22:760:10:346:-21.8403,0,-59.0847	0/1:14:7,7:7:244:7:244:-18.0847,0,-18.0847	0/1:20:12,8:12:405:8:286:-20.0649,0,-30.7532	0/1:87:46,41:46:1608:41:1434:-103.163,0,-118.817	1/1:35:0,35:0:0:35:1246:-112.444,-10.5361,0	1/1:19:0,19:0:0:19:664:-60.084,-5.71957,0	1/1:50:0,50:0:0:50:1781:-160.572,-15.0515,0	0/1:67:33,34:33:1146:34:1220:-89.9381,0,-83.2742	1/1:21:0,21:0:0:21:734:-66.381,-6.32163,0	1/1:32:0,32:0:0:32:1098:-99.1228,-9.63296,0	0/1:18:8,9:8:287:9:320:-23.7643,0,-20.7969	1/1:16:0,15:0:0:15:529:-47.6387,-4.51545,0	0/1:31:21,9:21:720:9:319:-19.7156,0,-55.7834	0/1:23:8,15:8:284:15:524:-40.5649,0,-18.9797	1/1:281:4,276:4:144:276:9679:-857.78,-71.3156,0	1/1:19:0,19:0:0:19:662:-59.9034,-5.71957,0	0/1:49:23,26:23:802:26:929:-69.1773,0,-57.7478	0/1:44:25,19:25:891:19:660:-46.4766,0,-67.2642	1/1:16:0,16:0:0:16:570:-51.6328,-4.81648,0	0/1:13:5,8:5:174:8:280:-21.6258,0,-12.0879	1/1:77:0,76:0:0:76:2662:-239.536,-22.8783,0	1/1:24:0,24:0:0:24:859:-77.6318,-7.22472,0	0/1:19:10,9:10:342:9:314:-22.8773,0,-25.3907	1/1:21:0,21:0:0:21:729:-65.9295,-6.32163,0	1/1:71:0,71:0:0:71:2494:-224.711,-21.3731,0	1/1:18:1,17:1:36:17:577:-48.6515,-1.82027,0	0/1:27:10,17:10:350:17:601:-46.2916,0,-23.7079	0/1:40:18,22:18:612:22:774:-57.9398,0,-43.3566	0/1:54:28,26:28:971:26:906:-65.598,0,-71.445	0/1:41:22,18:22:782:18:625:-44.1725,0,-58.3026	0/1:58:31,26:31:1092:26:910:-64.6969,0,-81.0703	0/1:107:50,57:50:1754:57:1988:-146.981,0,-125.933	1/1:23:0,23:0:0:23:797:-72.0468,-6.92369,0	1/1:53:0,53:0:0:53:1874:-168.939,-15.9546,0	1/1:63:0,63:0:0:63:2232:-201.144,-18.9649,0	0/1:237:129,108:129:4519:108:3807:-271.127,0,-335.18	0/1:333:183,149:183:6403:149:5219:-369.549,0,-476.072	0/1:49:33,16:33:1144:16:557:-35.7063,0,-88.5129	1/1:50:0,50:0:0:50:1749:-157.691,-15.0515,0	1/1:87:0,85:0:0:85:2994:-268.726,-25.5876,0
chr07	22805734	.	A	C	118906	PASS	AB=0.461807;ABP=206.034;AC=54;AF=0.287234;AN=188;AO=7414;CIGAR=1X;DP=24034;DPB=24034;DPRA=3.87546;EPP=16102.3;EPPR=36053.8;GTI=1;LEN=1;MEANALT=1.19672;MQM=59.9861;MQMR=59.9919;NS=94;NUMALT=1;ODDS=3.63877;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=261335;QR=590661;RO=16606;RPL=7414;RPP=16102.3;RPPR=36053.8;RPR=0;RUN=1;SAF=7414;SAP=16102.3;SAR=0;SRF=16606;SRP=36062.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:25,15:25:892:15:536:-36.5336,0,-68.5585	0/1:116:68,48:68:2414:48:1707:-118.996,0,-182.596	0/1:111:73,38:73:2587:38:1340:-87.4838,0,-199.665	0/1:157:90,67:90:3205:67:2392:-168.276,0,-241.411	0/0:61:61,0:61:2171:0:0:0,-18.3628,-195.656	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/0:97:97,0:97:3476:0:0:0,-29.1999,-313.051	0/1:137:78,59:78:2771:59:2108:-148.748,0,-208.391	0/0:102:102,0:102:3628:0:0:0,-30.7051,-326.725	0/1:79:48,31:48:1720:31:1088:-74.446,0,-131.304	0/0:279:279,0:279:9914:0:0:0,-83.9874,-892.205	0/0:48:48,0:48:1703:0:0:0,-14.4494,-153.555	0/1:26:15,11:15:531:11:392:-27.7933,0,-40.2951	0/1:47:24,23:24:852:23:808:-58.8917,0,-62.852	0/1:24:8,16:8:284:16:559:-43.4129,0,-18.6786	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:36:36,0:36:1279:0:0:0,-10.8371,-115.412	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.102	0/1:119:62,57:62:2199:57:2011:-145.439,0,-162.353	0/1:118:61,56:61:2175:56:1994:-144.152,0,-160.349	0/0:123:123,0:123:4383:0:0:0,-37.0267,-394.642	0/1:111:50,61:50:1757:61:2192:-164.131,0,-124.997	0/0:102:102,0:102:3634:0:0:0,-30.7051,-327.265	0/1:96:49,47:49:1747:47:1665:-121.237,0,-128.615	0/1:56:26,30:26:923:30:1067:-79.4835,0,-66.5291	0/1:251:130,121:130:4652:121:4231:-305.412,0,-343.284	0/0:171:171,0:171:6097:0:0:0,-51.4761,-548.833	0/0:13:13,0:13:455:0:0:0,-3.91339,-41.282	0/1:195:122,73:122:4370:73:2551:-171.137,0,-334.771	0/0:151:145,6:145:5142:6:212:0,-26.0307,-443.496	0/0:114:114,0:114:4031:0:0:0,-34.3174,-362.98	0/1:1071:574,497:574:20469:497:17537:-1255.57,0,-1519.31	0/0:1134:1132,1:1132:40272:1:36:0,-337.829,-3618.95	0/0:970:968,2:968:34381:2:72:0,-285.162,-3086.39	0/1:2662:1434,1225:1434:51025:1225:43252:-3090.52,0,-3789.75	0/1:1366:668,697:668:23753:697:24588:-1801.05,0,-1725.92	0/1:94:52,42:52:1856:42:1492:-106.278,0,-139.023	0/1:207:108,99:108:3860:99:3504:-253.259,0,-285.283	0/1:213:110,102:110:3919:102:3584:-258.59,0,-288.726	0/1:832:444,387:444:15801:387:13725:-984.52,0,-1171.27	0/1:132:76,56:76:2711:56:1992:-139.818,0,-204.498	0/1:135:67,68:67:2365:68:2373:-173.189,0,-172.468	0/1:116:69,47:69:2447:47:1666:-115.307,0,-185.566	0/1:21:12,9:12:415:9:320:-22.8207,0,-31.3587	0/1:21:12,9:12:428:9:316:-22.4572,0,-32.5372	0/0:113:113,0:113:4040:0:0:0,-34.0164,-363.788	0/0:99:99,0:99:3532:0:0:0,-29.802,-318.09	0/1:148:81,67:81:2871:67:2341:-166.393,0,-214.076	0/0:121:121,0:121:4281:0:0:0,-36.4246,-385.468	0/1:115:72,43:72:2561:43:1519:-102.384,0,-196.121	0/1:167:84,83:84:3000:83:2947:-215.193,0,-219.96	0/1:1099:634,465:634:22528:465:16317:-1137.39,0,-1695.75	0/1:126:71,55:71:2517:55:1916:-134.784,0,-188.851	0/0:95:95,0:95:3372:0:0:0,-28.5978,-303.696	0/1:898:518,379:518:18452:379:13390:-934.515,0,-1389.89	0/1:76:44,32:44:1559:32:1140:-80.0309,0,-117.723	0/1:143:77,66:77:2720:66:2342:-167.992,0,-201.996	0/1:808:458,350:458:16204:350:12306:-864.155,0,-1214.82	0/0:1231:1228,2:1228:43769:2:72:0,-363.79,-3930.91	0/0:96:96,0:96:3435:0:0:0,-28.8989,-309.363	0/0:59:59,0:59:2103:0:0:0,-17.7608,-189.539	0/1:709:352,356:352:12550:356:12551:-915.945,0,-915.845	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:192:192,0:192:6805:0:0:0,-57.7978,-612.524	0/1:47:26,21:26:932:21:752:-53.8578,0,-70.0505	0/0:76:76,0:76:2698:0:0:0,-22.8783,-243.064	0/1:174:115,59:115:4069:59:2084:-135.449,0,-314.018	0/1:127:50,77:50:1796:77:2670:-202.313,0,-123.692	0/0:180:179,1:179:6411:1:27:0,-51.4856,-574.377	0/0:137:136,0:136:4838:0:0:0,-40.9401,-435.217	0/1:69:30,39:30:1043:39:1387:-104.357,0,-73.405	0/1:925:516,409:516:18345:409:14365:-1013.68,0,-1372.2	0/0:156:156,0:156:5523:0:0:0,-46.9607,-497.197	0/1:40:24,16:24:848:16:563:-38.958,0,-64.5985	0/0:196:195,1:195:6947:1:27:0,-56.3021,-622.598	0/0:144:144,0:144:5133:0:0:0,-43.3483,-462.113	0/1:140:79,61:79:2791:61:2144:-151.082,0,-209.285	0/0:70:70,0:70:2484:0:0:0,-21.0721,-223.771	0/0:1204:1202,1:1202:42738:1:36:0,-358.901,-3841.41	0/0:93:93,0:93:3288:0:0:0,-27.9958,-296.14	0/1:88:45,43:45:1603:43:1502:-108.981,0,-118.069	0/1:245:137,108:137:4904:108:3850:-272.944,0,-367.759	0/1:46:22,24:22:775:24:835:-61.6192,0,-56.2238	0/1:32:18,14:18:635:14:471:-33.0766,0,-47.844	0/1:26:11,15:11:388:15:536:-40.748,0,-27.4306	0/1:64:32,32:32:1116:32:1120:-81.8404,0,-81.4787	0/0:37:37,0:37:1290:0:0:0,-11.1381,-116.399	0/0:62:62,0:62:2215:0:0:0,-18.6639,-199.614	0/0:53:53,0:53:1879:0:0:0,-15.9546,-169.388	0/1:583:295,288:295:10481:288:10081:-731.743,0,-767.714	0/1:537:255,281:255:9042:281:9820:-722.049,0,-652.052	0/1:39:13,26:13:464:26:914:-70.8345,0,-30.3573	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218
chr07	22861820	.	C	T	122239	PASS	AB=0.50479;ABP=3.94648;AC=134;AF=0.712766;AN=188;AO=5951;CIGAR=1X;DP=8285;DPB=8285;DPRA=0;EPP=12925.4;EPPR=5062.54;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.9906;MQMR=60;NS=94;NUMALT=1;ODDS=2.10195;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212075;QR=82160;RO=2330;RPL=0;RPP=12925.4;RPPR=5062.54;RPR=5951;RUN=1;SAF=0;SAP=12925.4;SAR=5951;SRF=0;SRP=5062.54;SRR=2330;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:84:42,42:42:1474:42:1500:-110.008,0,-107.666	0/1:62:14,48:14:492:48:1711:-135.611,0,-25.9485	0/1:156:103,53:103:3609:53:1872:-121.796,0,-278.055	0/1:228:109,119:109:3851:119:4268:-315.663,0,-278.152	1/1:65:0,65:0:0:65:2311:-208.25,-19.567,0	1/1:37:0,37:0:0:37:1311:-118.291,-11.1381,0	1/1:85:0,85:0:0:85:3043:-274.1,-25.5876,0	0/1:88:36,52:36:1253:52:1836:-139.029,0,-86.5792	1/1:106:0,106:0:0:106:3804:-342.557,-31.9092,0	0/1:51:29,22:29:1031:22:780:-55.1705,0,-77.7501	1/1:53:0,53:0:0:53:1890:-170.377,-15.9546,0	1/1:141:0,141:0:0:141:5018:-451.769,-42.4452,0	0/1:93:43,50:43:1521:50:1772:-131.767,0,-109.185	0/1:73:39,34:39:1391:34:1216:-87.7714,0,-103.513	0/1:61:32,28:32:1140:28:1008:-72.6147,0,-84.4877	1/1:87:0,87:0:0:87:3084:-277.787,-26.1896,0	1/1:27:0,27:0:0:27:953:-86.0833,-8.12781,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:24:14,10:14:482:10:360:-25.5196,0,-36.4813	0/1:130:52,78:52:1855:78:2788:-212.027,0,-128.095	1/1:182:0,182:0:0:182:6481:-583.378,-54.7875,0	0/1:80:41,39:41:1463:39:1374:-99.8747,0,-107.883	1/1:131:0,131:0:0:131:4690:-422.26,-39.4349,0	0/1:56:18,37:18:635:37:1310:-101.284,0,-40.5609	0/1:83:43,40:43:1501:40:1432:-104.192,0,-110.395	0/1:261:121,140:121:4238:140:5007:-372.208,0,-303.034	1/1:244:0,244:0:0:244:8665:-779.85,-73.4513,0	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	0/1:226:128,98:128:4540:98:3459:-243.49,0,-340.736	1/1:101:3,98:3:108:98:3490:-304.236,-20.3289,0	1/1:78:2,76:2:72:76:2707:-237.037,-16.6436,0	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:33:12,21:12:419:21:752:-58.0723,0,-28.1087	0/1:209:94,115:94:3314:115:4096:-305.912,0,-235.566	0/1:117:56,61:56:1979:61:2188:-161.965,0,-143.164	0/1:80:42,38:42:1487:38:1364:-98.9783,0,-110.041	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:83:31,52:31:1099:52:1847:-141.524,0,-74.234	0/1:38:15,23:15:536:23:820:-62.6834,0,-37.1357	0/1:193:77,116:77:2679:116:4130:-313.786,0,-183.255	0/1:54:29,25:29:1024:25:900:-65.0654,0,-76.217	0/1:60:26,34:26:919:34:1216:-91.6848,0,-64.9644	1/1:155:0,155:0:0:155:5519:-496.838,-46.6597,0	1/1:111:0,111:0:0:111:3976:-358.03,-33.4143,0	0/1:132:69,63:69:2463:63:2230:-161.227,0,-182.188	1/1:108:0,108:0:0:108:3857:-347.325,-32.5112,0	0/1:51:28,23:28:975:23:828:-59.4916,0,-72.709	0/1:131:56,75:56:1987:75:2651:-199.399,0,-139.669	0/1:14:11,3:11:392:3:108:-5.86075,0,-31.4056	0/1:87:40,47:40:1424:47:1682:-125.477,0,-102.268	1/1:46:0,46:0:0:46:1644:-148.249,-13.8474,0	0/1:16:4,12:4:129:12:428:-34.0423,0,-7.11118	0/1:122:57,65:57:2006:65:2316:-171.975,0,-144.087	0/1:62:24,38:24:852:38:1347:-102.866,0,-58.3365	0/1:15:8,7:8:271:7:248:-18.1487,0,-20.204	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:50:0,50:0:0:50:1779:-160.392,-15.0515,0	1/1:110:0,110:0:0:110:3933:-354.161,-33.1133,0	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	1/1:145:0,145:0:0:145:5143:-463.015,-43.6494,0	1/1:183:1,182:1:36:182:6484:-580.048,-51.4902,0	0/1:34:17,17:17:612:17:599:-44.0031,0,-45.1784	1/1:78:0,78:0:0:78:2792:-251.52,-23.4803,0	0/1:164:88,75:88:3112:75:2665:-190.324,0,-231.028	0/1:171:115,56:115:4074:56:2004:-129.157,0,-315.373	1/1:32:0,32:0:0:32:1112:-100.384,-9.63296,0	1/1:96:0,96:0:0:96:3412:-307.294,-28.8989,0	0/1:48:30,18:30:1067:18:644:-43.8412,0,-81.8918	0/1:24:14,10:14:491:10:360:-25.5196,0,-37.2964	1/1:182:0,182:0:0:182:6515:-586.433,-54.7875,0	0/1:78:32,46:32:1116:46:1640:-124.408,0,-77.2642	1/1:123:1,122:1:36:122:4343:-387.449,-33.4284,0	1/1:153:0,153:0:0:153:5474:-492.787,-46.0576,0	0/1:104:46,58:46:1628:58:2076:-155.803,0,-115.502	1/1:77:1,76:1:36:76:2707:-240.276,-19.581,0	1/1:21:0,21:0:0:21:737:-66.6506,-6.32163,0	1/1:83:0,83:0:0:83:2953:-265.993,-24.9855,0	0/1:53:29,24:29:1022:24:860:-61.7672,0,-76.3363	0/1:165:75,89:75:2621:89:3175:-236.246,0,-186.408	0/1:62:32,30:32:1128:30:1068:-77.7682,0,-83.1644	0/1:62:25,37:25:883:37:1320:-100.438,0,-61.1236	0/1:53:31,22:31:1081:22:784:-54.9293,0,-81.642	0/1:140:68,72:68:2386:72:2571:-189.495,0,-172.854	1/1:30:0,30:0:0:30:1054:-95.1692,-9.0309,0	1/1:66:0,66:0:0:66:2364:-213.018,-19.868,0	1/1:89:0,89:0:0:89:3173:-285.793,-26.7917,0	0/1:45:19,26:19:652:26:927:-70.201,0,-45.4519	0/1:125:77,48:77:2705:48:1706:-116.196,0,-206.066	0/1:90:71,19:71:2503:19:680:-34.4227,0,-198.431	1/1:121:0,121:0:0:121:4306:-387.718,-36.4246,0	1/1:99:0,99:0:0:99:3516:-316.65,-29.802,0
chr07	23243072	.	TC	TT	173534	PASS	AB=0.483577;ABP=14.8499;AC=141;AF=0.75;AN=188;AO=8152;CIGAR=1M1X;DP=10783;DPB=10783;DPRA=0;EPP=17661.5;EPPR=5655.41;GTI=0;LEN=1;MEANALT=1.10638;MQM=59.9859;MQMR=59.9931;NS=94;NUMALT=1;ODDS=3.30919;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=292039;QR=92636;RO=2619;RPL=8148;RPP=17670.1;RPPR=5655.41;RPR=4;RUN=1;SAF=8151;SAP=17696.2;SAR=1;SRF=2619;SRP=5690.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	0/1:211:115,96:115:4080:96:3439:-246.205,0,-303.869	0/1:176:90,86:90:3206:86:3052:-221.927,0,-235.782	0/1:259:149,110:149:5271:110:3948:-277.544,0,-396.56	1/1:71:2,69:2:72:69:2484:-216.976,-14.5364,0	1/1:71:0,70:0:0:70:2520:-226.691,-21.0721,0	0/1:135:87,48:87:3069:48:1713:-113.815,0,-235.8	1/1:252:0,252:0:0:252:9042:-813.754,-75.8596,0	1/1:85:0,85:0:0:85:3048:-274.548,-25.5876,0	0/1:101:45,56:45:1550:56:2016:-151.309,0,-109.381	1/1:81:0,81:0:0:81:2908:-261.955,-24.3834,0	0/1:80:33,47:33:1171:47:1683:-127.674,0,-81.6142	0/1:81:46,35:46:1638:35:1256:-88.9557,0,-123.323	0/1:97:49,48:49:1740:48:1709:-124.894,0,-127.684	0/1:53:23,30:23:828:30:1061:-79.8448,0,-58.8895	1/1:55:0,55:0:0:55:1980:-178.474,-16.5567,0	1/1:107:1,106:1:36:106:3816:-340.037,-28.6119,0	1/1:72:0,72:0:0:72:2584:-232.809,-21.6742,0	0/1:65:28,37:28:979:37:1332:-100.615,0,-68.8532	0/1:211:127,84:127:4503:84:2992:-205.991,0,-341.921	1/1:131:0,131:0:0:131:4704:-423.518,-39.4349,0	1/1:177:1,176:1:36:176:6311:-564.482,-49.684,0	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	1/1:71:0,71:0:0:71:2552:-229.93,-21.3731,0	0/1:76:40,36:40:1420:36:1288:-93.3453,0,-105.218	0/1:382:185,197:185:6501:197:7044:-519.027,0,-470.183	1/1:238:0,238:0:0:238:8530:-767.696,-71.6451,0	0/1:34:21,13:21:748:13:468:-32.2246,0,-57.4107	1/1:334:0,334:0:0:334:11966:-1076.79,-100.544,0	0/1:203:105,98:105:3752:98:3499:-254.012,0,-276.771	1/1:119:1,118:1:36:118:4228:-377.101,-32.2243,0	0/1:27:16,11:16:563:11:396:-27.8549,0,-42.8711	1/1:22:0,22:0:0:22:779:-70.4321,-6.62266,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/1:32:15,17:15:534:17:612:-45.7805,0,-38.7611	1/1:223:0,223:0:0:223:7999:-719.928,-67.1297,0	0/1:245:124,121:124:4430:121:4343:-317.291,0,-325.117	0/1:97:62,35:62:2189:35:1251:-83.6944,0,-168.074	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/1:177:78,99:78:2732:99:3552:-266.605,0,-192.839	0/1:60:25,35:25:885:35:1245:-94.2909,0,-61.9058	0/1:169:69,100:69:2439:100:3576:-271.163,0,-168.891	0/1:61:33,28:33:1157:28:1004:-72.313,0,-86.0712	0/1:57:30,27:30:1078:27:972:-70.6392,0,-80.1744	1/1:61:0,61:0:0:61:2192:-197.545,-18.3628,0	1/1:213:0,213:0:0:213:7634:-687.087,-64.1194,0	0/1:262:138,124:138:4822:124:4423:-319.371,0,-355.269	1/1:118:0,118:0:0:118:4212:-379.259,-35.5215,0	1/1:203:1,202:1:36:202:7248:-648.772,-57.5108,0	1/1:115:0,115:0:0:115:4114:-370.444,-34.6185,0	0/1:21:8,13:8:286:13:464:-35.7759,0,-19.7639	0/1:158:70,88:70:2492:88:3160:-237.016,0,-176.968	1/1:90:0,90:0:0:90:3227:-290.651,-27.0927,0	0/1:27:17,10:17:605:10:360:-24.6165,0,-46.6532	0/1:163:81,82:81:2895:82:2934:-215.219,0,-211.719	0/1:28:16,12:16:561:12:428:-30.43,0,-42.3894	0/1:30:17,13:17:572:13:468:-33.4287,0,-42.7611	1/1:34:0,31:0:0:31:1112:-100.032,-9.33193,0	1/1:94:0,94:0:0:94:3380:-304.414,-28.2968,0	1/1:127:0,126:0:0:126:4503:-405.079,-37.9298,0	0/1:24:14,10:14:485:10:360:-25.5196,0,-36.753	1/1:277:0,277:0:0:277:9900:-890.935,-83.3853,0	1/1:256:2,253:2:72:253:9056:-808.214,-70.2125,0	0/1:98:46,52:46:1608:52:1864:-138.538,0,-115.506	1/1:98:0,98:0:0:98:3501:-315.299,-29.5009,0	0/1:164:87,77:87:3094:77:2740:-197.473,0,-229.32	0/1:176:118,57:118:4180:57:2041:-131.068,0,-323.492	0/1:32:16,16:16:565:16:576:-42.542,0,-41.5466	1/1:72:0,72:0:0:72:2592:-233.528,-21.6742,0	1/1:91:0,90:0:0:90:3224:-290.131,-27.0927,0	0/1:35:19,16:19:674:16:552:-39.4668,0,-50.4517	1/1:162:0,162:0:0:162:5812:-523.192,-48.7669,0	1/1:84:0,84:0:0:84:3012:-271.311,-25.2865,0	1/1:119:0,119:0:0:119:4268:-384.296,-35.8226,0	1/1:187:1,186:1:25:186:6684:-599.121,-53.7927,0	0/1:172:79,92:79:2770:92:3299:-245.292,0,-197.703	1/1:126:1,125:1:36:125:4463:-398.236,-34.3315,0	1/1:30:1,29:1:36:29:1040:-90.3161,-5.43263,0	1/1:163:0,163:0:0:163:5842:-525.89,-49.0679,0	1/1:164:0,164:0:0:164:5856:-527.133,-49.3689,0	1/1:208:1,205:1:36:205:7347:-657.715,-58.7554,0	1/1:108:0,108:0:0:108:3876:-349.034,-32.5112,0	0/1:60:29,31:29:1002:31:1116:-82.6899,0,-72.424	0/1:87:41,46:41:1433:46:1648:-122.419,0,-103.072	0/1:138:71,67:71:2524:67:2408:-175.434,0,-185.869	1/1:57:0,57:0:0:57:2037:-183.601,-17.1587,0	1/1:85:0,85:0:0:85:3031:-273.019,-25.5876,0	1/1:75:0,75:0:0:75:2688:-242.165,-22.5773,0	0/1:62:32,29:32:1145:29:1044:-75.5521,0,-84.637	0/1:133:56,77:56:1995:77:2764:-208.964,0,-139.785	0/1:59:37,22:37:1324:22:792:-53.8449,0,-101.702	1/1:75:0,75:0:0:75:2684:-241.805,-22.5773,0	1/1:73:0,73:0:0:73:2609:-235.057,-21.9752,0
chr07	23726985	.	A	C	231169	PASS	AB=0.548205;ABP=153.115;AC=56;AF=0.297872;AN=188;AO=11428;CIGAR=1X;DP=23484;DPB=23484;DPRA=1.96985;EPP=24818.6;EPPR=26141;GTI=13;LEN=1;MEANALT=1.08929;MQM=59.8898;MQMR=59.9864;NS=94;NUMALT=1;ODDS=1.03795;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=406820;QR=430679;RO=12045;RPL=2;RPP=24801.2;RPPR=26089;RPR=11426;RUN=1;SAF=2;SAP=24801.2;SAR=11426;SRF=6;SRP=26106.3;SRR=12039;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:41,12:41:1476:12:428:-22.9033,0,-117.181	0/1:243:132,111:132:4708:111:3967:-284.07,0,-350.729	0/1:181:102,79:102:3623:79:2807:-198.378,0,-271.788	0/1:251:145,106:145:5212:106:3755:-262.584,0,-393.657	0/0:93:93,0:93:3333:0:0:0,-27.9958,-300.185	0/0:85:85,0:85:3048:0:0:0,-25.5875,-274.549	0/1:275:143,130:143:5123:130:4621:-333.513,0,-378.67	0/0:300:300,0:300:10723:0:0:0,-90.309,-964.976	0/0:156:156,0:156:5565:0:0:0,-46.9607,-500.974	0/1:190:113,77:113:4051:77:2726:-188.387,0,-307.58	0/0:90:90,0:90:3179:0:0:0,-27.0927,-286.334	0/1:99:45,53:45:1608:53:1863:-138.078,0,-115.149	0/1:72:40,32:40:1436:32:1144:-81.5935,0,-107.864	0/1:96:50,46:50:1783:46:1636:-118.612,0,-131.853	0/1:68:38,30:38:1368:30:1050:-74.3387,0,-102.951	0/0:98:98,0:98:3490:0:0:0,-29.5009,-314.311	0/0:78:78,0:78:2800:0:0:0,-23.4803,-252.239	0/0:81:80,0:80:2851:0:0:0,-24.0824,-256.467	0/1:160:31,129:31:1107:129:4566:-362.937,0,-51.7658	0/1:354:196,158:196:7019:158:5630:-400.248,0,-525.207	0/0:336:336,0:336:12023:0:0:0,-101.146,-1081.91	0/0:185:183,0:183:6567:0:0:0,-55.0885,-590.749	0/0:178:177,1:177:6323:1:36:0,-49.9851,-565.562	0/0:265:263,2:263:9396:2:68:0,-73.3152,-839.145	0/1:139:66,73:66:2372:73:2604:-192.765,0,-171.895	0/1:529:272,257:272:9677:257:9180:-666.771,0,-711.634	0/0:376:374,2:374:13390:2:72:0,-106.351,-1198.05	0/1:43:29,14:29:1044:14:486:-31.1237,0,-81.3305	0/0:554:552,2:552:19794:2:68:0,-160.313,-1774.52	0/1:280:166,114:166:5937:114:4073:-282.467,0,-450.148	0/0:195:193,2:193:6896:2:72:0,-51.8641,-613.863	0/0:20:19,1:19:684:1:36:0,-2.42232,-58.2921	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	1/1:1608:9,1599:9:315:1599:56949:-5094.48,-455.369,0	1/1:1021:19,1002:19:684:1002:35702:-3150.03,-245.461,0	0/0:196:195,1:195:6942:1:36:0,-55.4036,-621.249	0/1:348:155,193:155:5528:193:6898:-516.119,0,-392.887	0/1:304:52,252:52:1850:252:8950:-713.951,0,-75.2654	1/1:512:3,509:3:108:509:18093:-1617.85,-144.052,0	0/1:260:131,129:131:4703:129:4608:-336.615,0,-345.16	0/1:165:20,145:20:720:145:5164:-415.232,0,-15.4588	0/1:165:98,67:98:3515:67:2393:-165.955,0,-266.889	0/1:72:38,34:38:1347:34:1205:-87.0797,0,-99.8553	0/1:54:30,24:30:1058:24:851:-60.6538,0,-79.274	0/0:158:158,0:158:5641:0:0:0,-47.5627,-507.81	0/0:250:250,0:250:8971:0:0:0,-75.2575,-807.365	0/1:318:166,152:166:5899:152:5398:-390.224,0,-435.292	0/0:146:146,0:146:5223:0:0:0,-43.9504,-470.207	0/0:236:236,0:236:8436:0:0:0,-71.0431,-759.242	0/0:239:239,0:239:8567:0:0:0,-71.9462,-771.025	1/1:953:12,941:12:432:941:33560:-2980.1,-247.66,0	0/1:195:105,90:105:3765:90:3216:-230.956,0,-280.346	0/0:142:142,0:142:5091:0:0:0,-42.7463,-458.332	1/1:984:28,956:28:1008:956:34063:-2973.36,-205.177,0	0/1:238:120,118:120:4287:118:4219:-308.245,0,-314.363	0/1:244:109,135:109:3894:135:4832:-361.581,0,-277.202	1/1:776:11,765:11:381:765:27360:-2426.45,-198.979,0	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/0:184:184,0:184:6558:0:0:0,-55.3895,-590.302	0/0:114:114,0:114:4083:0:0:0,-34.3174,-367.655	1/1:196:5,191:5:180:191:6822:-597.395,-42.4498,0	0/0:332:332,0:332:11897:0:0:0,-99.942,-1070.54	0/0:366:363,3:363:12998:3:100:0,-100.847,-1160.3	0/1:155:103,52:103:3662:52:1859:-120.929,0,-283.123	0/0:142:141,1:141:5039:1:36:0,-39.148,-450.058	0/1:282:128,153:128:4542:153:5384:-399.715,0,-323.995	0/1:275:120,155:120:4316:155:5517:-413.873,0,-305.831	1/1:271:23,248:23:828:248:8778:-715.1,-6.73501,0	0/0:233:230,1:230:8196:1:32:0,-66.6718,-734.36	0/0:90:90,0:90:3227:0:0:0,-27.0927,-290.651	1/1:788:24,764:24:864:764:27229:-2371.65,-159.129,0	0/0:186:186,0:186:6662:0:0:0,-55.9916,-599.6	0/0:113:113,0:113:4056:0:0:0,-34.0164,-365.226	0/0:369:369,0:369:13160:0:0:0,-111.08,-1184.2	0/0:253:253,0:253:9072:0:0:0,-76.1606,-816.451	0/1:217:112,105:112:3980:105:3722:-269.855,0,-293.064	0/0:169:169,0:169:6043:0:0:0,-50.8741,-543.971	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4767	0/0:177:177,0:177:6332:0:0:0,-53.2823,-569.969	0/0:173:173,0:173:6205:0:0:0,-52.0782,-557.911	0/0:401:400,0:400:14298:0:0:0,-120.412,-1286.22	0/0:128:127,0:127:4555:0:0:0,-38.2308,-409.755	0/1:74:30,44:30:1063:44:1559:-118.325,0,-73.7046	0/1:90:49,41:49:1721:41:1448:-103.52,0,-128.078	0/1:169:88,81:88:3151:81:2871:-207.751,0,-232.94	0/0:33:33,0:33:1176:0:0:0,-9.93399,-106.148	0/0:99:99,0:99:3531:0:0:0,-29.802,-317.999	0/0:102:102,0:102:3636:0:0:0,-30.7051,-327.443	1/1:396:36,360:36:1292:360:12769:-1032.41,-2.62412,0	0/1:702:69,633:69:2463:633:22437:-1807.41,0,-10.6008	0/1:77:24,53:24:856:53:1872:-145.577,0,-54.1818	0/0:198:198,0:198:7086:0:0:0,-59.6039,-637.799	0/0:116:116,0:116:4144:0:0:0,-34.9195,-373.142
chr07	24169935	.	CGGGGT	CGGCGC,TGGCGC	244107	PASS	AB=0.414779,0.578723;ABP=342.771,292.931;AC=132,56;AF=0.702128,0.297872;AN=188;AO=7575,7077;CIGAR=3M1X1M1X,1X2M1X1M1X;DP=14737;DPB=14736.7;DPRA=0,1.78254;EPP=16451.9,15353.2;EPPR=0;GTI=10;LEN=6,6;MEANALT=2.37234,3.07547;MQM=28.7089,39.4842;MQMR=0;NS=94;NUMALT=2;ODDS=22554.4;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=262661,243729;QR=0;RO=0;RPL=0,2;RPP=16451.9,15353.2;RPPR=0;RPR=7575,7075;RUN=1,1;SAF=0,0;SAP=16451.9,15370.5;SAR=7575,7077;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:12:0,5,7:0:0:5,7:177,237:-28.3998,-18.4521,-16.947,-10.2304,0,-8.12316	1/2:152:0,66,84:0:0:66,84:2340,2873:-350.194,-218.77,-198.902,-131.473,0,-106.186	1/2:80:0,55,24:0:0:55,24:1912,834:-172.466,-63.548,-46.9914,-108.97,0,-101.745	1/2:270:0,145,125:0:0:145,125:5023,4353:-670.732,-344.264,-300.615,-326.781,0,-289.153	1/1:74:0,74,0:0:0:74,0:2585,0:-179.852,-22.2762,0,-179.852,-22.2762,-179.852	1/1:47:0,47,0:0:0:47,0:1648,0:-107.918,-14.1484,0,-107.918,-14.1484,-107.918	1/2:91:0,52,39:0:0:52,39:1829,1339:-225.096,-106.301,-90.6474,-119.11,0,-107.37	1/1:189:0,189,0:0:0:189,0:6494,0:-428.31,-56.8947,0,-428.31,-56.8947,-428.31	1/1:84:0,83,0:0:0:83,0:2885,0:-189.085,-24.9855,0,-189.085,-24.9855,-189.085	1/2:58:0,23,35:0:0:23,35:789,1231:-149.476,-97.8453,-90.9216,-51.9377,0,-41.4016	1/1:104:0,103,0:0:0:103,0:3581,0:-262.602,-31.0061,0,-262.602,-31.0061,-262.602	1/2:92:0,45,47:0:0:45,47:1557,1588:-209.995,-120.983,-107.437,-89.2974,0,-75.149	1/2:85:0,48,37:0:0:48,37:1659,1268:-191.496,-96.8469,-82.3975,-94.9418,0,-83.8037	1/2:100:0,55,45:0:0:55,45:1865,1502:-230.932,-115.425,-98.8683,-115.802,0,-102.255	1/2:63:0,41,22:0:0:41,22:1453,770:-155.715,-61.4397,-49.0974,-94.599,0,-87.9763	1/1:126:0,125,0:0:0:125,0:4308,0:-302.037,-37.6288,0,-302.037,-37.6288,-302.037	1/1:92:0,92,0:0:0:92,0:3185,0:-210.119,-27.6948,0,-210.119,-27.6948,-210.119	1/1:69:0,69,0:0:0:69,0:2363,0:-157.508,-20.7711,0,-157.508,-20.7711,-157.508	1/2:214:0,51,159:0:0:51,159:1790,5342:-506.139,-404.865,-389.513,-101.283,0,-53.4193	1/2:183:0,83,98:0:0:83,98:2923,3397:-456.474,-266.657,-241.671,-189.812,0,-160.311	1/1:124:0,122,0:0:0:122,0:4237,0:-295.36,-36.7257,0,-295.36,-36.7257,-295.36	1/1:88:0,87,0:0:0:87,0:3053,0:-232.823,-26.1896,0,-232.823,-26.1896,-232.823	1/1:78:0,77,1:0:0:77,1:2645,35:-194.486,-23.1793,0,-191.707,-20.0593,-191.406	1/1:58:0,58,0:0:0:58,0:2004,0:-140.413,-17.4597,0,-140.413,-17.4597,-140.413	1/2:71:0,46,25:0:0:46,25:1595,866:-162.637,-64.5703,-50.7229,-98.3684,0,-90.8426	1/2:358:0,185,171:0:0:185,171:6475,5851:-901.652,-461.932,-406.242,-439.707,0,-388.23	1/1:192:0,192,0:0:0:192,0:6693,0:-465.054,-57.7978,0,-465.054,-57.7978,-465.054	1/2:37:0,22,15:0:0:22,15:769,517:-87.438,-40.5118,-33.8891,-47.2328,0,-42.7174	1/1:183:0,182,0:0:0:182,0:6259,0:-477.876,-54.7875,0,-477.876,-54.7875,-477.876	1/2:143:0,58,84:0:0:58,84:2012,2928:-350.663,-228.726,-211.266,-121.903,0,-96.6165	1/1:160:0,159,0:0:0:159,0:5523,0:-406.495,-47.8638,0,-406.495,-47.8638,-406.495	1/1:20:0,20,0:0:0:20,0:718,0:-49.3344,-6.0206,0,-49.3344,-6.0206,-49.3344	1/1:25:0,25,0:0:0:25,0:884,0:-61.4214,-7.52575,0,-61.4214,-7.52575,-61.4214	2/2:520:0,8,504:0:0:8,504:288,17454:-1475.45,-1459.43,-1457.03,-151.719,-135.715,0	2/2:835:0,11,819:0:0:11,819:385,28274:-2389.96,-2368.07,-2364.76,-246.544,-224.678,0	2/2:596:0,13,582:0:0:13,582:443,20112:-1710.42,-1685.13,-1681.22,-175.199,-149.9,0	1/1:277:0,274,0:0:0:274,0:9492,0:-730.11,-82.4822,0,-730.11,-82.4822,-730.11	1/2:114:0,59,54:0:0:59,54:2070,1883:-272.309,-146.628,-128.867,-125.641,0,-109.385	1/2:336:0,55,279:0:0:55,279:1899,9569:-835.366,-727.237,-710.68,-108.086,0,-24.0982	2/2:425:0,9,413:0:0:9,413:305,14252:-1230.06,-1211.35,-1208.64,-124.325,-105.585,0	1/2:163:0,87,75:0:0:87,75:3035,2631:-386.379,-203.081,-176.891,-183.335,0,-160.758	1/2:163:0,45,117:0:0:45,117:1553,3974:-405.861,-309.559,-296.013,-96.3253,0,-61.1048	1/2:57:0,23,34:0:0:23,34:806,1180:-141.75,-92.5766,-85.6529,-49.4703,0,-39.2353	1/2:114:0,79,35:0:0:79,35:2753,1204:-275.389,-95.5184,-71.7371,-180.191,0,-169.655	1/2:85:0,53,32:0:0:53,32:1789,1086:-204.095,-85.8356,-69.881,-118.571,0,-108.938	1/1:99:0,98,0:0:0:98,0:3407,0:-258.629,-29.5009,0,-258.629,-29.5009,-258.629	1/1:146:0,146,0:0:0:146,0:5095,0:-331.695,-43.9504,0,-331.695,-43.9504,-331.695	1/2:171:0,99,70:0:0:99,70:3460,2403:-413.911,-188.909,-159.107,-225.037,0,-203.965	1/1:124:0,123,1:0:0:123,1:4245,30:-313.081,-37.0267,0,-310.706,-34.3543,-310.405	1/1:160:0,159,0:0:0:159,0:5563,0:-408.831,-47.8638,0,-408.831,-47.8638,-408.831	1/1:92:0,92,0:0:0:92,0:3161,0:-240.184,-27.6948,0,-240.184,-27.6948,-240.184	2/2:570:0,14,550:0:0:14,550:494,19069:-1662,-1629.97,-1625.75,-165.567,-133.52,0	1/2:121:0,64,55:0:0:64,55:2208,1929:-272.894,-147.052,-127.786,-125.811,0,-109.254	1/1:53:0,53,0:0:0:53,0:1844,0:-140.841,-15.9546,0,-140.841,-15.9546,-140.841	1/1:29:0,29,0:0:0:29,0:995,0:-65.7548,-8.72987,0,-65.7548,-8.72987,-65.7548	1/2:119:0,39,80:0:0:39,80:1374,2762:-296.563,-212.633,-200.893,-84.2211,0,-60.1387	1/2:59:0,26,33:0:0:26,33:886,1145:-148.578,-90.3101,-82.4833,-58.5739,0,-48.64	2/2:409:0,12,394:0:0:12,394:419,13598:-1198.99,-1171.17,-1167.56,-118.606,-90.7892,0	1/1:52:0,52,0:0:0:52,0:1789,0:-137.634,-15.6536,0,-137.634,-15.6536,-137.634	1/1:45:0,42,0:0:0:42,0:1459,0:-101.177,-12.6433,0,-101.177,-12.6433,-101.177	1/1:145:0,144,1:0:0:144,1:4953,32:-366.607,-43.3483,0,-364.085,-40.5132,-363.784	2/2:272:0,6,265:0:0:6,265:211,9190:-802.606,-788.853,-787.047,-79.773,-65.9621,0	1/1:207:0,204,0:0:0:204,0:7051,0:-535.442,-61.4101,0,-535.442,-61.4101,-535.442	1/1:225:0,225,0:0:0:225,0:7829,0:-575.4,-67.7318,0,-575.4,-67.7318,-575.4	1/2:100:0,27,72:0:0:27,72:942,2499:-251.002,-193.744,-185.616,-57.2736,0,-35.5994	1/1:58:0,58,0:0:0:58,0:2020,0:-148.992,-17.4597,0,-148.992,-17.4597,-148.992	1/2:167:0,82,83:0:0:82,83:2785,2854:-405.664,-224.325,-199.641,-181.372,0,-156.386	1/2:126:0,40,86:0:0:40,86:1407,3021:-328.772,-237.815,-225.774,-91.2605,0,-65.3719	2/2:233:0,25,208:0:0:25,208:871,7052:-608.376,-555.349,-547.823,-62.6142,-9.31173,0	1/1:51:0,51,0:0:0:51,0:1793,0:-116.836,-15.3525,0,-116.836,-15.3525,-116.836	1/2:75:0,39,35:0:0:39,35:1319,1223:-187.8,-97.3526,-85.6124,-90.4599,0,-79.9238	2/2:234:0,14,219:0:0:14,219:489,7475:-652.07,-620.603,-616.389,-65.9256,-34.508,0	1/1:120:0,120,0:0:0:120,0:4140,0:-272.301,-36.1236,0,-272.301,-36.1236,-272.301	1/1:64:0,64,0:0:0:64,0:2207,0:-145.719,-19.2659,0,-145.719,-19.2659,-145.719	1/1:190:0,187,1:0:0:187,1:6486,29:-453.275,-56.2926,0,-450.996,-53.9967,-450.695	1/1:146:0,145,1:0:0:145,1:5039,36:-370.983,-43.6494,0,-368.672,-41.0476,-368.371	1/2:145:0,84,59:0:0:84,59:2900,2036:-321.372,-156.112,-130.826,-165.341,0,-147.58	1/1:114:0,113,1:0:0:113,1:3913,36:-256.765,-34.0164,0,-254.016,-30.9298,-253.715	1/1:26:0,26,0:0:0:26,0:917,0:-59.9003,-7.82678,0,-59.9003,-7.82678,-59.9003	1/1:111:0,111,0:0:0:111,0:3890,0:-270.696,-33.4143,0,-270.696,-33.4143,-270.696	1/1:122:0,122,0:0:0:122,0:4273,0:-278.914,-36.7257,0,-278.914,-36.7257,-278.914	1/1:240:0,240,0:0:0:240,0:8326,0:-616.401,-72.2472,0,-616.401,-72.2472,-616.401	1/1:133:0,133,0:0:0:133,0:4574,0:-337.623,-40.037,0,-337.623,-40.037,-337.623	1/2:82:0,50,32:0:0:50,32:1728,1088:-198.496,-85.5626,-70.5111,-113.246,0,-103.613	1/2:113:0,60,53:0:0:60,53:2083,1823:-278.81,-142.828,-124.766,-136.293,0,-120.338	1/2:133:0,78,55:0:0:78,55:2648,1852:-321.194,-146.204,-122.724,-175.299,0,-158.742	1/1:74:0,74,0:0:0:74,0:2574,0:-169.101,-22.2762,0,-169.101,-22.2762,-169.101	1/1:110:0,110,0:0:0:110,0:3732,0:-249,-33.1133,0,-249,-33.1133,-249	1/1:107:0,107,0:0:0:107,0:3679,0:-244.383,-32.2102,0,-244.383,-32.2102,-244.383	1/2:306:0,38,266:0:0:38,266:1307,9092:-785.64,-704.711,-693.272,-80.9674,0,-0.893409	1/2:537:0,80,451:0:0:80,451:2785,15400:-1366.59,-1195.4,-1171.32,-171.185,0,-35.4203	1/2:91:0,47,44:0:0:47,44:1628,1505:-223.992,-118.516,-104.368,-105.784,0,-92.5386	1/1:87:0,87,0:0:0:87,0:2976,0:-222.163,-26.1896,0,-222.163,-26.1896,-222.163	1/1:137:0,136,0:0:0:136,0:4736,0:-348.218,-40.9401,0,-348.218,-40.9401,-348.218
chr07	24169952	.	CCGTGC	TTGTGA,CTGTGA	252715	PASS	AB=0.431126,0.564747;ABP=212.691,188.318;AC=131,57;AF=0.696809,0.303191;AN=188;AO=7589,7137;CIGAR=2X3M1X,1M1X3M1X;DP=14787;DPB=14787.3;DPRA=0,1.84921;EPP=16360.9,14907.3;EPPR=0;GTI=10;LEN=6,6;MEANALT=2.21277,2.75862;MQM=28.6831,39.5536;MQMR=0;NS=94;NUMALT=2;ODDS=22970.9;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=72,0;PQR=0;PRO=0;QA=265399,249225;QR=0;RO=0;RPL=7575,7068;RPP=16360.9,14907.3;RPPR=0;RPR=14,69;RUN=1,1;SAF=0,0;SAP=16482.3,15500.8;SAR=7589,7137;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:12:0,5,7:0:0:5,7:171,241:-28.666,-18.8078,-17.3027,-10.142,0,-8.03479	1/2:154:0,67,85:0:0:67,85:2334,2953:-356.066,-223.398,-203.229,-132.702,0,-107.115	1/2:80:0,55,25:0:0:55,25:1894,858:-173.869,-65.1474,-48.5908,-109.022,0,-101.496	1/2:273:0,146,126:0:0:146,126:5121,4404:-679.839,-347.904,-303.954,-331.921,0,-293.991	1/1:74:0,74,0:0:0:74,0:2600,0:-180.17,-22.2762,0,-180.17,-22.2762,-180.17	1/1:47:0,46,0:0:0:46,0:1618,0:-104.758,-13.8474,0,-104.758,-13.8474,-104.758	1/2:91:0,52,39:0:0:52,39:1841,1374:-228.329,-109.116,-93.4623,-119.533,0,-107.793	1/1:189:0,189,0:0:0:189,0:6618,0:-431.697,-56.8947,0,-431.697,-56.8947,-431.697	1/1:84:0,84,0:0:0:84,0:2919,0:-191.998,-25.2865,0,-191.998,-25.2865,-191.998	1/2:58:0,23,35:0:0:23,35:806,1233:-150.454,-97.8663,-90.9426,-52.897,0,-42.3609	1/1:105:0,105,0:0:0:105,0:3638,0:-267.938,-31.6082,0,-267.938,-31.6082,-267.938	1/2:92:0,45,47:0:0:45,47:1587,1643:-214.202,-124.52,-110.974,-89.9717,0,-75.8233	1/2:85:0,48,37:0:0:48,37:1681,1301:-193.939,-98.639,-84.1896,-95.5963,0,-84.4581	1/2:100:0,55,44:0:0:55,44:1926,1500:-231.828,-114.871,-98.3145,-116.983,0,-103.738	1/2:64:0,41,23:0:0:41,23:1440,816:-158.814,-65.067,-52.7248,-94.0722,0,-87.1486	1/1:127:0,126,1:0:0:126,1:4415,36:-306.333,-37.9298,0,-303.524,-34.7763,-303.223	1/1:92:0,91,1:0:0:91,1:3166,36:-207.178,-27.3937,0,-204.43,-24.3072,-204.129	1/1:70:0,70,0:0:0:70,0:2437,0:-160.461,-21.0721,0,-160.461,-21.0721,-160.461	1/2:215:0,51,163:0:0:51,163:1754,5654:-526.206,-425.533,-410.18,-100.723,0,-51.6551	1/2:184:0,83,101:0:0:83,101:2896,3520:-464.967,-276.062,-251.076,-189.215,0,-158.811	1/1:124:0,124,0:0:0:124,0:4339,0:-302.515,-37.3277,0,-302.515,-37.3277,-302.515	1/1:88:0,88,0:0:0:88,0:3123,0:-236.46,-26.4906,0,-236.46,-26.4906,-236.46	1/1:78:0,77,1:0:0:77,1:2683,36:-196.59,-23.1793,0,-193.737,-19.9776,-193.436	1/1:58:0,58,0:0:0:58,0:2057,0:-142.398,-17.4597,0,-142.398,-17.4597,-142.398	1/2:71:0,46,25:0:0:46,25:1593,878:-163.396,-65.3256,-51.4783,-98.3744,0,-90.8486	1/2:357:0,184,167:0:0:184,167:6418,5769:-896.115,-458.012,-402.622,-438.13,0,-387.858	1/1:192:0,191,0:0:0:191,0:6723,0:-464.636,-57.4967,0,-464.636,-57.4967,-464.636	1/2:38:0,22,16:0:0:22,16:772,568:-90.349,-43.5087,-36.886,-47.147,0,-42.3305	1/1:185:0,184,1:0:0:184,1:6411,35:-484.635,-55.3895,0,-481.832,-52.242,-481.531	1/2:143:0,57,85:0:0:57,85:1986,3011:-355.72,-234.921,-217.763,-120.864,0,-95.2768	1/1:159:0,159,0:0:0:159,0:5576,0:-409.346,-47.8638,0,-409.346,-47.8638,-409.346	1/1:20:0,20,0:0:0:20,0:719,0:-49.351,-6.0206,0,-49.351,-6.0206,-49.351	1/1:25:0,25,0:0:0:25,0:886,0:-61.4755,-7.52575,0,-61.4755,-7.52575,-61.4755	2/2:526:0,8,514:0:0:8,514:282,17976:-1517.1,-1501.17,-1498.76,-154.729,-138.788,0	2/2:836:0,10,817:0:0:10,817:351,28329:-2391.21,-2371.29,-2368.28,-245.942,-226.034,0	2/2:601:0,13,586:0:0:13,586:455,20484:-1737.03,-1711.51,-1707.6,-176.404,-150.874,0	1/1:280:0,278,0:0:0:278,0:9701,0:-741.771,-83.6863,0,-741.771,-83.6863,-741.771	1/2:113:0,60,53:0:0:60,53:2128,1864:-275.339,-145.888,-127.827,-129.758,0,-113.804	1/2:335:0,54,279:0:0:54,279:1907,9760:-848.231,-740.976,-724.72,-107.266,0,-23.2784	2/2:428:0,9,417:0:0:9,417:320,14609:-1257.72,-1238.48,-1235.77,-125.53,-106.29,0	1/2:160:0,86,73:0:0:86,73:2959,2566:-379.206,-197.706,-171.818,-181.493,0,-159.518	1/2:164:0,44,119:0:0:44,119:1551,4164:-417.22,-322.818,-309.573,-94.3326,0,-58.5101	1/2:57:0,23,34:0:0:23,34:811,1189:-142.586,-93.1858,-86.2621,-49.6989,0,-39.4639	1/2:114:0,78,35:0:0:78,35:2728,1222:-274.24,-96.4631,-72.9828,-177.82,0,-167.283	1/2:86:0,54,32:0:0:54,32:1852,1110:-210.188,-88.0181,-71.7625,-122.488,0,-112.855	1/1:99:0,98,0:0:0:98,0:3409,0:-258.217,-29.5009,0,-258.217,-29.5009,-258.217	1/1:145:0,144,0:0:0:144,0:5035,0:-327.726,-43.3483,0,-327.726,-43.3483,-327.726	1/2:172:0,100,72:0:0:100,72:3463,2515:-423.195,-197.111,-167.008,-226.399,0,-204.725	1/1:126:0,124,1:0:0:124,1:4331,35:-317.311,-37.3277,0,-314.533,-34.5367,-314.231	1/1:160:0,160,0:0:0:160,0:5635,0:-413.572,-48.1648,0,-413.572,-48.1648,-413.572	1/1:92:0,91,0:0:0:91,0:3209,0:-242.769,-27.3937,0,-242.769,-27.3937,-242.769	2/2:574:0,14,559:0:0:14,559:483,19651:-1708.24,-1676.51,-1672.3,-168.276,-136.513,0	1/2:121:0,65,56:0:0:65,56:2266,1984:-280.359,-151.1,-131.533,-129.555,0,-112.698	1/1:53:0,53,0:0:0:53,0:1852,0:-141.712,-15.9546,0,-141.712,-15.9546,-141.712	1/1:29:0,29,0:0:0:29,0:1021,0:-66.6851,-8.72987,0,-66.6851,-8.72987,-66.6851	1/2:118:0,38,80:0:0:38,80:1333,2782:-295.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chr07	24169963	.	C	A	99677.7	PASS	AB=0.416336;ABP=324.574;AC=132;AF=0.702128;AN=188;AO=7499;CIGAR=1X;DP=14505;DPB=14505;DPRA=0;EPP=16286.9;EPPR=14941.4;GTI=14;LEN=1;MEANALT=1.18085;MQM=28.6962;MQMR=39.579;NS=94;NUMALT=1;ODDS=1.53724;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=268926;QR=249044;RO=6983;RPL=7499;RPP=16286.9;RPPR=14941.4;RPR=0;RUN=1;SAF=0;SAP=16286.9;SAR=7499;SRF=0;SRP=15166.4;SRR=6983;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:11:6,5:6:216:5:180:-8.45872,0,-15.2393	0/1:144:78,66:78:2788:66:2372:-108.677,0,-190.691	0/1:77:24,53:24:860:53:1872:-98.264,0,-48.8061	0/1:272:127,145:127:4535:145:5199:-294.433,0,-314.931	1/1:74:0,73:0:0:73:2628:-178.642,-21.9752,0	1/1:47:0,47:0:0:47:1688:-108.594,-14.1484,0	0/1:89:37,52:37:1328:52:1868:-109.094,0,-89.7573	1/1:185:0,185:0:0:185:6643:-424.973,-55.6906,0	1/1:83:0,83:0:0:83:2976:-191.073,-24.9855,0	0/1:57:34,23:34:1216:23:828:-43.2188,0,-89.6115	1/1:103:0,102:0:0:102:3660:-263.286,-30.7051,0	0/1:92:47,45:47:1667:45:1620:-76.3419,0,-112.627	0/1:84:36,48:36:1283:48:1728:-85.3384,0,-82.5567	0/1:96:43,53:43:1519:53:1895:-101.076,0,-99.1409	0/1:64:23,41:23:824:41:1476:-88.2733,0,-53.4235	1/1:124:0,124:0:0:124:4452:-304.788,-37.3277,0	1/1:92:0,92:0:0:92:3308:-212.134,-27.6948,0	1/1:70:0,70:0:0:70:2516:-161.717,-21.0721,0	0/1:213:161,52:161:5740:52:1872:-55.7169,0,-415.006	0/1:177:96,81:96:3439:81:2903:-158.078,0,-245.48	1/1:121:0,121:0:0:121:4348:-297.251,-36.4246,0	1/1:88:0,88:0:0:88:3156:-237.418,-26.4906,0	1/1:75:1,74:1:36:74:2647:-188.374,-19.0746,0	1/1:57:0,57:0:0:57:2043:-140.38,-17.1587,0	0/1:71:25,46:25:896:46:1644:-92.0209,0,-52.4296	0/1:348:167,181:167:5951:181:6496:-386.164,0,-416.801	1/1:190:0,190:0:0:190:6811:-464.768,-57.1957,0	0/1:38:16,22:16:572:22:783:-42.5788,0,-36.9705	1/1:183:0,183:0:0:183:6560:-489.152,-55.0885,0	0/1:140:83,57:83:2968:57:2044:-97.0621,0,-214.417	1/1:159:0,159:0:0:159:5716:-413.514,-47.8638,0	1/1:19:0,19:0:0:19:684:-46.902,-5.71957,0	1/1:25:0,25:0:0:25:891:-61.4158,-7.52575,0	0/0:510:502,8:502:17871:8:288:0,-134.847,-1480.13	0/0:813:802,11:802:28670:11:396:0,-219.15,-2373.14	0/0:582:569,12:569:20249:12:432:0,-147.601,-1682.15	1/1:274:0,274:0:0:274:9827:-742.128,-82.4822,0	0/1:114:54,60:54:1936:60:2156:-113.965,0,-132.874	0/1:333:280,53:280:10007:53:1908:-21.7292,0,-739.203	0/0:422:409,9:409:14554:9:324:0,-103.828,-1227.61	0/1:159:74,85:74:2647:85:3048:-159.636,0,-177.423	0/1:162:118,43:118:4184:43:1548:-57.4252,0,-311.144	0/1:57:34,23:34:1216:23:828:-39.7543,0,-88.2589	0/1:114:35,79:35:1230:79:2840:-172.216,0,-73.701	0/1:82:30,52:30:1059:52:1868:-111.505,0,-68.027	1/1:96:0,96:0:0:96:3448:-257.768,-28.8989,0	1/1:143:0,143:0:0:143:5119:-327.418,-43.0473,0	0/1:162:70,92:70:2483:92:3304:-190.839,0,-166.989	1/1:123:1,122:1:36:122:4371:-313.124,-33.524,0	1/1:158:0,158:0:0:158:5680:-411.495,-47.5627,0	1/1:91:0,91:0:0:91:3242:-243.062,-27.3937,0	0/0:560:547,13:547:19492:13:468:0,-134.324,-1656.09	0/1:121:56,65:56:2008:65:2332:-113.363,0,-133.084	1/1:53:0,53:0:0:53:1904:-143.535,-15.9546,0	1/1:28:0,28:0:0:28:1004:-64.6848,-8.42884,0	0/1:118:79,39:79:2816:39:1404:-61.2809,0,-204.737	0/1:58:32,26:32:1148:26:936:-50.7552,0,-82.7217	0/0:405:391,12:391:13993:12:432:0,-89.2467,-1198.47	1/1:52:0,52:0:0:52:1851:-140.352,-15.6536,0	1/1:45:0,45:0:0:45:1620:-110.406,-13.5464,0	1/1:145:1,144:1:32:144:5172:-370.9,-40.5132,0	0/0:267:261,5:261:9274:5:180:0,-67.0115,-792.357	1/1:201:0,201:0:0:201:7174:-533.74,-60.507,0	1/1:224:0,224:0:0:224:8044:-581.34,-67.4307,0	0/1:96:66,28:66:2360:28:1008:-40.1745,0,-175.324	1/1:58:0,57:0:0:57:2044:-148.244,-17.1587,0	0/1:161:84,77:84:2986:77:2768:-150.036,0,-210.189	0/1:124:81,41:81:2904:41:1472:-70.1323,0,-217.581	0/0:228:203,24:203:7271:24:864:0,-9.23184,-562.484	1/1:51:0,51:0:0:51:1836:-117.533,-15.3525,0	0/1:74:36,38:36:1288:38:1364:-81.2767,0,-91.2022	0/0:226:213,13:213:7557:13:460:0,-34.3987,-622.158	1/1:113:0,113:0:0:113:4056:-259.321,-34.0164,0	1/1:62:0,62:0:0:62:2228:-142.664,-18.6639,0	1/1:190:1,188:1:36:188:6748:-457.25,-53.7497,0	1/1:145:0,145:0:0:145:5194:-375.919,-43.6494,0	0/1:140:58,82:58:2060:82:2931:-146.175,0,-132.668	1/1:114:1,113:1:36:113:4035:-255.774,-30.9298,0	1/1:26:0,26:0:0:26:936:-60.1296,-7.82678,0	1/1:110:0,110:0:0:110:3944:-270.377,-33.1133,0	1/1:123:0,123:0:0:123:4380:-281.975,-37.0267,0	1/1:238:0,238:0:0:238:8513:-618.674,-71.6451,0	1/1:132:0,132:0:0:132:4735:-341.713,-39.736,0	0/1:82:32,50:32:1123:50:1800:-105.791,0,-73.1251	0/1:111:51,60:51:1808:60:2156:-123.141,0,-123.437	0/1:132:55,77:55:1967:77:2755:-160.379,0,-132.314	1/1:74:0,74:0:0:74:2656:-170.248,-22.2762,0	1/1:110:0,109:0:0:109:3908:-251.057,-32.8123,0	1/1:107:0,107:0:0:107:3835:-246.681,-32.2102,0	0/1:302:265,37:265:9464:37:1332:-0.628452,0,-717.517	0/1:525:445,79:445:15897:79:2836:-36.345,0,-1205.64	0/1:89:43,46:43:1544:46:1634:-92.1724,0,-107.388	1/1:85:0,84:0:0:84:3003:-218.646,-25.2865,0	1/1:137:0,135:0:0:135:4840:-349.225,-40.6391,0
chr07	24212237	.	GCAT	ACAC,GCAC	488673	PASS	AB=0.700419,0.292385;ABP=8827.22,9472.25;AC=95,93;AF=0.505319,0.494681;AN=188;AO=17819,7405;CIGAR=1X2M1X,3M1X;DP=25407;DPB=25428.8;DPRA=0,0;EPP=38687.8,15952.7;EPPR=120.83;GTI=10;LEN=4,1;MEANALT=3.11702,3.11702;MQM=59.872,59.9635;MQMR=60;NS=94;NUMALT=2;ODDS=20347.6;PAIRED=0,0;PAIREDR=0;PAO=3.5,43.5;PQA=122,1552;PQR=1430;PRO=40;QA=625414,263180;QR=2147;RO=62;RPL=1,0;RPP=38687.8,16082.8;RPPR=137.642;RPR=17818,7405;RUN=1,1;SAF=0,15;SAP=38696.5,15952.7;SAR=17819,7390;SRF=2;SRP=120.83;SRR=60;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:93:0,60,33:0:0:60,33:2104,1188:-268.427,-97.2362,-79.1744,-171.489,0,-161.555	1/2:287:0,118,169:0:0:118,169:4165,5998:-828.196,-489.035,-453.513,-339.515,0,-288.641	1/2:379:0,284,93:0:0:284,93:9932,3318:-1078.51,-270.516,-185.024,-808.028,0,-780.032	1/2:695:0,565,126:0:0:565,126:19878,4500:-1985.03,-366.945,-196.863,-1618.15,0,-1580.22	1/2:187:0,125,62:0:0:125,62:4417,2224:-541.421,-181.701,-144.072,-360.018,0,-341.354	1/2:205:0,154,50:0:0:154,50:5423,1770:-585.484,-143.994,-97.6349,-441.307,0,-426.256	1/2:369:0,287,81:0:0:287,81:10066,2895:-1055.17,-236.042,-149.647,-819.128,0,-794.745	1/2:476:0,349,123:0:0:349,123:12225,4340:-1347.46,-352.778,-247.718,-994.709,0,-957.683	1/2:217:3,141,73:3:108:141,73:4910,2608:-602.118,-203.802,-170.169,-390.382,0,-377.22	1/2:428:0,288,139:0:0:288,139:10057,4937:-1220.42,-402.386,-315.69,-818.135,0,-776.292	1/2:90:1,57,32:1:36:57,32:1999,1139:-252.156,-89.8299,-75.6086,-159.625,0,-152.93	1/2:89:0,66,23:0:0:66,23:2303,824:-254.868,-67.5596,-47.6916,-187.664,0,-180.74	1/2:119:0,88,31:0:0:88,31:3026,1103:-335.783,-90.0731,-63.5825,-245.888,0,-236.556	1/2:192:0,133,59:0:0:133,59:4640,2091:-548.072,-170.699,-130.662,-377.725,0,-359.964	1/2:120:0,88,31:0:0:88,31:3117,1067:-340.504,-86.5833,-60.0926,-253.85,0,-244.518	1/2:95:0,42,52:0:0:42,52:1468,1851:-270.201,-150.785,-138.142,-119.467,0,-103.813	1/2:123:0,68,55:0:0:68,55:2405,1947:-354.831,-158.949,-138.479,-196.236,0,-179.679	1/2:103:0,74,27:0:0:74,27:2620,955:-291.109,-77.7729,-55.4967,-213.326,0,-205.198	1/2:39:0,25,14:0:0:25,14:882,500:-112.879,-41.0659,-33.5401,-72.1139,0,-67.8995	1/2:468:0,317,150:0:0:317,150:11152,5334:-1342.44,-434.819,-339.392,-907.755,0,-862.601	1/2:347:5,218,121:5:179:218,121:7608,4265:-949.912,-332.628,-281.601,-604.163,0,-582.336	1/2:564:0,459,103:0:0:459,103:16198,3665:-1617.64,-298.658,-160.485,-1318.95,0,-1287.94	1/2:254:6,152,96:6:208:152,96:5378,3428:-698.802,-262.571,-233.72,-421.131,0,-409.138	1/2:385:0,230,154:0:0:230,154:8104,5424:-1101.35,-441.56,-372.323,-659.778,0,-613.419	1/2:171:0,110,60:0:0:110,60:3860,2112:-486.05,-171.915,-138.802,-314.127,0,-296.065	1/2:660:1,401,252:1:36:401,252:14054,9029:-1876.75,-733.485,-615.71,-1140.68,0,-1067.76	1/2:727:1,509,209:1:36:509,209:17901,7438:-2059.07,-603.291,-453.004,-1453.17,0,-1393.2	1/2:90:0,76,13:0:0:76,13:2661,460:-253.764,-37.2761,-14.3978,-216.296,0,-212.383	1/2:781:5,505,271:5:180:505,271:17837,9623:-2220.32,-769.401,-632.068,-1437.73,0,-1370.84	1/2:274:8,146,116:8:267:146,116:5042,4124:-721.7,-314.493,-292.155,-388.035,0,-374.729	1/2:574:0,508,65:0:0:508,65:17736,2323:-1631.66,-189.225,-36.3017,-1442.26,0,-1422.69	1/2:87:0,78,9:0:0:78,9:2735,320:-248.992,-26.4331,-2.95275,-222.914,0,-220.205	1/2:59:0,40,19:0:0:40,19:1405,676:-169.789,-55.4484,-43.4072,-114.694,0,-108.975	1/2:153:0,79,74:0:0:79,74:2774,2635:-440.865,-215.121,-191.339,-226.097,0,-203.821	1/2:155:0,122,32:0:0:122,32:4248,1152:-439.383,-93.9974,-57.2717,-345.383,0,-335.75	1/2:49:0,35,14:0:0:35,14:1227,504:-141.305,-41.466,-30.9299,-100.196,0,-95.9817	1/2:446:1,324,120:1:36:324,120:11373,4239:-1267.55,-342.293,-247.697,-922.642,0,-889.456	1/2:706:0,514,191:0:0:514,191:18063,6741:-2018.99,-548.779,-394.05,-1470.08,0,-1412.58	1/2:82:0,58,24:0:0:58,24:2018,824:-231.335,-67.2478,-49.7881,-164.431,0,-157.207	1/2:86:0,53,33:0:0:53,33:1848,1171:-246.051,-95.7627,-79.8081,-150.64,0,-140.706	1/2:234:0,171,63:0:0:171,63:6036,2233:-673.658,-182.149,-130.673,-491.745,0,-472.78	1/2:75:0,56,18:0:0:56,18:1978,639:-213.075,-52.0042,-35.1466,-161.009,0,-155.591	1/2:488:0,356,129:0:0:356,129:12404,4577:-1381.49,-372.919,-265.752,-1008.58,0,-969.749	1/2:198:0,155,43:0:0:155,43:5443,1519:-566.597,-123.874,-77.2139,-442.9,0,-429.956	1/2:209:0,164,45:0:0:164,45:5724,1582:-594.624,-129.064,-79.6948,-465.852,0,-452.306	1/2:149:0,101,48:0:0:101,48:3522,1699:-425.164,-138.744,-108.34,-286.771,0,-272.322	1/2:364:0,243,120:0:0:243,120:8498,4291:-1041.2,-349.884,-276.734,-691.308,0,-655.184	1/2:855:1,618,233:1:28:618,233:21655,8293:-2435.25,-673.662,-489.844,-1759.68,0,-1691.75	1/2:321:0,227,92:0:0:227,92:8035,3304:-924.101,-269.627,-201.293,-654.575,0,-626.881	1/2:259:0,170,86:0:0:170,86:6000,3064:-738.324,-249.742,-198.567,-488.578,0,-462.689	1/2:461:5,341,114:5:179:341,114:12055,4063:-1296.81,-316.513,-228.46,-967.189,0,-947.469	1/2:119:0,94,25:0:0:94,25:3318,900:-343.918,-73.7375,-45.4407,-270.481,0,-262.955	1/2:342:0,250,90:0:0:250,90:8811,32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chr07	24415914	.	C	T	52282.6	PASS	AB=0.611133;ABP=538.747;AC=49;AF=0.260638;AN=188;AO=3076;CIGAR=1X;DP=9051;DPB=9051;DPRA=1.2977;EPP=6673.78;EPPR=12960.2;GTI=6;LEN=1;MEANALT=1.05556;MQM=59.9603;MQMR=59.9496;NS=94;NUMALT=1;ODDS=0.701458;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=107047;QR=209396;RO=5971;RPL=3075;RPP=6673.78;RPPR=12960.2;RPR=1;RUN=1;SAF=3076;SAP=6682.46;SAR=0;SRF=5971;SRP=12968.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:3,21:3:93:21:744:-60.0596,0,-1.45201	0/1:128:36,92:36:1272:92:3207:-250.324,0,-76.251	0/1:92:32,60:32:1123:60:2123:-163.644,0,-73.6824	0/1:332:130,202:130:4607:202:7138:-542.352,0,-314.852	0/0:22:21,1:21:747:1:32:0,-3.42335,-64.355	0/0:36:36,0:36:1256:0:0:0,-10.8371,-113.339	0/1:139:61,78:61:2126:78:2704:-201.759,0,-149.76	0/0:131:131,0:131:4608:0:0:0,-39.4349,-414.885	0/0:50:50,0:50:1756:0:0:0,-15.0515,-158.321	0/1:165:59,106:59:2075:106:3696:-283.174,0,-137.348	0/0:46:46,0:46:1603:0:0:0,-13.8474,-144.556	0/1:84:36,48:36:1228:48:1590:-118.092,0,-85.5287	0/1:102:48,54:48:1683:54:1853:-136.343,0,-121.048	0/1:85:43,42:43:1456:42:1402:-100.879,0,-105.737	0/1:95:56,39:56:1918:39:1371:-95.0899,0,-144.291	0/0:71:71,0:71:2480:0:0:0,-21.3731,-223.451	0/0:85:85,0:85:2950:0:0:0,-25.5875,-265.734	0/0:70:70,0:70:2440:0:0:0,-21.0721,-219.853	0/0:34:34,0:34:1145:0:0:0,-10.235,-103.343	0/1:160:55,105:55:1936:105:3700:-285.038,0,-126.349	0/0:140:140,0:140:4950:0:0:0,-42.1442,-445.583	0/0:78:78,0:78:2722:0:0:0,-23.4803,-245.224	0/0:155:155,0:155:5423:0:0:0,-46.6596,-488.073	0/0:52:52,0:52:1809:0:0:0,-15.6536,-163.087	0/1:32:7,25:7:248:25:871:-69.0707,0,-13.0312	0/1:356:94,261:94:3284:261:9130:-714.618,0,-188.702	0/0:120:120,0:120:4214:0:0:0,-36.1236,-379.442	0/1:44:27,17:27:925:17:581:-39.3652,0,-70.314	0/0:194:194,0:194:6849:0:0:0,-58.3998,-616.488	0/1:207:92,113:92:3266:113:3947:-293.375,0,-232.023	0/0:181:179,2:179:6317:2:72:0,-47.6497,-561.785	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:6:6,0:6:207:0:0:0,-1.80618,-18.9669	0/1:13:4,9:4:140:9:315:-24.7738,0,-9.03119	0/1:4:3,1:3:104:1:32:-1.99519,0,-8.49869	0/1:18:12,6:12:428:6:207:-13.5484,0,-33.4403	0/0:244:243,1:243:8459:1:36:0,-69.853,-757.732	0/1:250:81,169:81:2892:169:5876:-453.703,0,-185.259	0/1:70:34,36:34:1185:36:1223:-89.2965,0,-85.8806	0/1:10:3,7:3:104:7:252:-20.0187,0,-6.69251	0/1:194:70,124:70:2451:124:4322:-330.759,0,-162.441	0/1:40:21,19:21:733:19:654:-47.1389,0,-54.2485	0/1:165:35,130:35:1232:130:4495:-354.984,0,-61.5113	0/1:115:59,56:59:2042:56:1927:-139.086,0,-149.431	0/1:74:43,31:43:1523:31:1062:-73.6092,0,-115.086	0/0:68:68,0:68:2374:0:0:0,-20.47,-213.904	0/0:66:66,0:66:2335:0:0:0,-19.868,-210.407	0/1:219:50,169:50:1771:169:5882:-463.573,0,-93.7469	0/0:102:102,0:102:3593:0:0:0,-30.7051,-322.944	0/0:99:99,0:99:3486:0:0:0,-29.802,-313.952	0/0:81:80,1:80:2844:1:36:0,-20.7852,-252.599	0/1:11:4,7:4:144:7:248:-19.3529,0,-10.0023	0/1:111:39,72:39:1373:72:2555:-196.785,0,-90.4523	0/1:133:62,71:62:2199:71:2531:-188.004,0,-158.138	0/0:30:30,0:30:1067:0:0:0,-9.0309,-96.3412	0/1:128:38,90:38:1328:90:3138:-244.116,0,-81.2848	0/1:53:19,34:19:659:34:1186:-91.0887,0,-43.6777	0/1:10:6,4:6:216:4:135:-9.47221,0,-16.7802	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:76:76,0:76:2629:0:0:0,-22.8783,-236.855	0/0:116:116,0:116:4063:0:0:0,-34.9195,-365.86	1/1:14:0,14:0:0:14:486:-44.0438,-4.21442,0	0/0:213:213,0:213:7515:0:0:0,-64.1194,-676.394	0/0:113:109,4:109:3832:4:144:0,-20.7028,-331.764	0/1:112:36,76:36:1279:76:2680:-207.729,0,-81.6971	0/0:83:83,0:83:2937:0:0:0,-24.9855,-264.562	0/1:322:107,215:107:3736:215:7496:-577.768,0,-239.513	0/1:79:24,55:24:839:55:1916:-148.931,0,-52.0459	0/1:21:15,6:15:506:6:212:-13.1032,0,-39.5387	0/0:62:62,0:62:2164:0:0:0,-18.6639,-195.023	0/1:80:37,43:37:1309:43:1463:-107.877,0,-94.0271	0/1:13:7,6:7:234:6:216:-15.8771,0,-17.4726	0/0:68:68,0:68:2411:0:0:0,-20.47,-217.247	0/0:38:38,0:38:1355:0:0:0,-11.4391,-122.25	0/0:97:97,0:97:3400:0:0:0,-29.1999,-305.946	0/0:130:130,0:130:4579:0:0:0,-39.1339,-412.278	0/1:113:39,74:39:1373:74:2566:-197.17,0,-88.8283	0/0:120:120,0:120:4236:0:0:0,-36.1236,-381.422	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:100:100,0:100:3561:0:0:0,-30.103,-320.698	0/0:93:93,0:93:3260:0:0:0,-27.9958,-293.621	0/0:113:111,1:111:3927:1:36:0,-30.4769,-350.025	0/0:85:85,0:85:2988:0:0:0,-25.5875,-269.153	0/1:69:38,31:38:1321:31:1040:-73.1284,0,-98.4162	0/1:102:56,46:56:1944:46:1547:-108.809,0,-144.521	0/1:145:81,64:81:2771:64:2202:-154.795,0,-205.979	0/1:33:18,15:18:622:15:507:-36.0176,0,-46.3681	0/0:97:97,0:97:3420:0:0:0,-29.1999,-308.016	0/0:73:73,0:73:2597:0:0:0,-21.9752,-233.977	0/1:44:27,17:27:964:17:600:-41.0839,0,-73.8315	0/1:88:56,32:56:1919:32:1132:-75.6979,0,-146.489	0/1:110:36,74:36:1203:74:2531:-194.931,0,-75.4503	0/0:46:46,0:46:1617:0:0:0,-13.8474,-145.817	0/0:129:129,0:129:4415:0:0:0,-38.8329,-397.526
chr07	24415995	.	G	A	32704.9	PASS	AB=0.545663;ABP=66.2715;AC=48;AF=0.255319;AN=188;AO=1917;CIGAR=1X;DP=7035;DPB=7035;DPRA=1.08965;EPP=4165.72;EPPR=11105.8;GTI=0;LEN=1;MEANALT=1;MQM=59.9285;MQMR=59.9902;NS=94;NUMALT=1;ODDS=4.46334;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68213;QR=182029;RO=5117;RPL=0;RPP=4165.72;RPPR=11105.8;RPR=1917;RUN=1;SAF=0;SAP=4165.72;SAR=1917;SRF=0;SRP=11114.4;SRR=5117;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:27,36:27:940:36:1284:-96.8985,0,-65.9459	0/1:63:26,37:26:923:37:1324:-100.497,0,-64.4219	0/1:89:33,56:33:1180:56:2012:-154.561,0,-78.7639	0/1:94:36,58:36:1262:58:2042:-155.75,0,-85.5841	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:34:34,0:34:1197:0:0:0,-10.235,-108.033	0/1:100:44,56:44:1572:56:1991:-149.361,0,-111.669	0/0:99:99,0:99:3522:0:0:0,-29.802,-317.19	0/0:106:102,4:102:3583:4:144:0,-18.5956,-309.361	0/1:58:26,32:26:910:32:1148:-86.1677,0,-64.7543	0/0:90:90,0:90:3214:0:0:0,-27.0927,-289.482	0/1:120:66,54:66:2341:54:1924:-137.313,0,-174.825	0/1:91:51,40:51:1797:40:1428:-101.424,0,-134.616	0/1:91:50,41:50:1792:41:1444:-102.859,0,-134.169	0/1:92:54,38:54:1940:38:1338:-93.0237,0,-147.181	0/0:90:90,0:90:3171:0:0:0,-27.0927,-285.612	0/0:25:25,0:25:859:0:0:0,-7.52575,-77.6207	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/0:47:47,0:47:1654:0:0:0,-14.1484,-149.146	0/1:78:25,53:25:900:53:1900:-147.798,0,-57.8407	0/0:165:165,0:165:5866:0:0:0,-49.6699,-528.05	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/0:53:53,0:53:1891:0:0:0,-15.9546,-170.468	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/1:133:51,82:51:1812:82:2917:-222.726,0,-123.323	0/1:160:72,88:72:2562:88:3160:-236.459,0,-182.665	0/0:178:177,1:177:6324:1:36:0,-49.9851,-565.653	0/1:30:19,11:19:669:11:396:-26.9518,0,-51.503	0/0:135:134,0:134:4758:0:0:0,-40.338,-428.016	0/1:93:39,54:39:1404:54:1936:-146.521,0,-98.6635	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.638	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	0/1:37:21,16:21:752:16:561:-39.679,0,-56.8681	0/1:53:37,16:37:1324:16:564:-34.762,0,-103.508	0/0:178:178,0:178:6338:0:0:0,-53.5833,-570.512	0/1:120:67,53:67:2387:53:1877:-133.072,0,-178.964	0/1:84:39,45:39:1388:45:1603:-119.273,0,-99.9324	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:69:32,37:32:1127:37:1309:-97.3385,0,-80.9664	0/1:38:24,14:24:845:14:500:-33.897,0,-64.928	0/1:149:77,72:77:2731:72:2563:-186.067,0,-201.178	0/1:32:17,15:17:608:15:517:-37.1973,0,-45.4191	0/1:38:19,19:19:659:19:684:-50.4512,0,-48.1932	0/0:93:92,1:92:3291:1:36:0,-24.3975,-292.811	0/0:53:53,0:53:1874:0:0:0,-15.9546,-168.938	0/1:124:47,77:47:1680:77:2741:-209.59,0,-114.159	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/0:76:76,0:76:2692:0:0:0,-22.8783,-242.524	0/0:100:100,0:100:3540:0:0:0,-30.103,-318.807	0/1:13:4,9:4:144:9:320:-25.229,0,-9.40023	0/1:59:25,34:25:900:34:1216:-91.9858,0,-63.5602	0/1:60:29,31:29:1023:31:1112:-82.3295,0,-74.3199	0/0:18:18,0:18:636:0:0:0,-5.41854,-57.568	0/1:76:25,51:25:881:51:1814:-140.662,0,-56.7276	0/1:51:15,36:15:528:36:1288:-100.871,0,-32.4988	0/1:10:3,7:3:104:7:248:-19.6539,0,-6.69251	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:100:100,0:100:3579:0:0:0,-30.103,-322.317	0/0:91:91,0:91:3224:0:0:0,-27.3937,-290.382	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/0:68:68,0:68:2427:0:0:0,-20.47,-218.685	0/0:168:165,3:165:5896:3:108:0,-40.4979,-520.673	0/1:89:39,50:39:1377:50:1781:-133.722,0,-97.435	0/0:38:38,0:38:1340:0:0:0,-11.4391,-120.897	0/1:120:46,74:46:1656:74:2621:-200.014,0,-113.205	0/1:124:32,92:32:1148:92:3286:-258.63,0,-66.3021	0/1:39:18,21:18:644:21:748:-55.9051,0,-46.5504	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.303	0/1:45:31,14:31:1116:14:504:-32.1517,0,-87.2053	0/1:15:8,7:8:288:7:248:-18.1464,0,-21.752	0/0:190:190,0:190:6722:0:0:0,-57.1957,-605.062	0/0:92:92,0:92:3276:0:0:0,-27.6948,-295.059	0/0:133:133,0:133:4735:0:0:0,-40.037,-426.308	0/0:103:103,0:103:3680:0:0:0,-31.0061,-331.401	0/1:67:25,42:25:881:42:1483:-113.594,0,-59.4369	0/0:63:63,0:63:2252:0:0:0,-18.9649,-202.943	0/0:29:29,0:29:1025:0:0:0,-8.72987,-92.5607	0/0:54:54,0:54:1907:0:0:0,-16.2556,-171.904	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:130:130,0:130:4640:0:0:0,-39.1339,-417.762	0/0:51:51,0:51:1819:0:0:0,-15.3525,-163.991	0/1:79:31,48:31:1107:48:1724:-131.664,0,-76.1588	0/1:43:19,24:19:676:24:856:-64.4168,0,-48.2237	0/1:135:66,69:66:2335:69:2451:-180.204,0,-169.768	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	0/0:71:71,0:71:2526:0:0:0,-21.3731,-227.591	0/0:81:80,1:80:2864:1:36:0,-20.7852,-254.399	0/1:103:58,45:58:2066:45:1566:-110.221,0,-155.204	0/1:176:79,97:79:2782:97:3420:-255.032,0,-197.638	0/1:48:14,34:14:495:34:1212:-94.9369,0,-30.4336	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:69:68,1:68:2387:1:36:0,-17.1728,-211.485
chr07	24416010	.	A	G	33534.6	PASS	AB=0.552137;ABP=85.8826;AC=48;AF=0.255319;AN=188;AO=1947;CIGAR=1X;DP=7047;DPB=7047;DPRA=1.1237;EPP=4196.19;EPPR=11001.6;GTI=0;LEN=1;MEANALT=1.03846;MQM=59.9122;MQMR=59.9922;NS=94;NUMALT=1;ODDS=5.26858;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69194;QR=182641;RO=5097;RPL=1943;RPP=4196.19;RPPR=11001.6;RPR=4;RUN=1;SAF=0;SAP=4230.87;SAR=1947;SRF=0;SRP=11071;SRR=5097;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:27,36:27:959:36:1284:-96.8985,0,-67.6605	0/1:64:26,38:26:932:38:1364:-103.794,0,-64.9329	0/1:88:31,56:31:1108:56:1950:-149.311,0,-72.63	0/1:97:36,61:36:1288:61:2162:-165.641,0,-87.0237	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/1:98:44,54:44:1584:54:1920:-143.576,0,-113.351	0/0:95:95,0:95:3401:0:0:0,-28.5978,-306.303	0/0:105:101,4:101:3605:4:144:0,-18.2945,-311.342	0/1:56:25,31:25:900:31:1116:-83.894,0,-64.4633	0/0:90:90,0:90:3240:0:0:0,-27.0927,-291.82	0/1:122:66,56:66:2356:56:2000:-143.548,0,-175.573	0/1:92:54,38:54:1928:38:1352:-94.2856,0,-146.102	0/1:88:49,39:49:1764:39:1384:-98.3682,0,-132.553	0/1:90:53,37:53:1908:37:1324:-92.3694,0,-144.905	0/0:93:93,0:93:3336:0:0:0,-27.9958,-300.457	0/0:27:27,0:27:963:0:0:0,-8.12781,-86.9859	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/1:80:26,54:26:932:54:1927:-149.624,0,-60.1165	0/0:163:163,0:163:5821:0:0:0,-49.0679,-524.003	0/0:72:72,0:72:2588:0:0:0,-21.6742,-233.168	0/0:52:52,0:52:1855:0:0:0,-15.6536,-167.229	0/0:66:66,0:66:2360:0:0:0,-19.868,-212.659	0/1:139:52,87:52:1868:87:3096:-237.014,0,-126.551	0/1:163:73,90:73:2616:90:3198:-238.977,0,-186.62	0/0:177:176,1:176:6303:1:36:0,-49.684,-563.763	0/1:29:19,10:19:680:10:360:-24.0144,0,-52.7993	0/0:136:136,0:136:4888:0:0:0,-40.9401,-440.07	0/1:93:39,54:39:1404:54:1922:-145.26,0,-98.6635	0/0:51:51,0:51:1836:0:0:0,-15.3525,-165.521	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:18:9,9:9:324:9:302:-22.0874,0,-24.0873	0/1:35:21,14:21:752:14:486:-33.5319,0,-57.4702	0/1:55:37,18:37:1320:18:633:-40.2441,0,-102.545	0/0:177:177,0:177:6352:0:0:0,-53.2823,-571.769	0/1:116:65,51:65:2328:51:1828:-129.881,0,-174.86	0/1:85:38,47:38:1368:47:1661:-124.187,0,-97.8333	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:70:30,40:30:1072:40:1405:-105.673,0,-75.7204	0/1:39:24,15:24:864:15:532:-36.4729,0,-66.3424	0/1:148:77,71:77:2759:71:2514:-181.96,0,-203.998	0/1:33:17,16:17:608:16:567:-41.4274,0,-45.118	0/1:37:18,19:18:648:19:680:-50.3911,0,-47.5138	0/0:93:92,0:92:3287:0:0:0,-27.6948,-295.818	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/1:125:48,77:48:1720:77:2742:-209.383,0,-117.457	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/0:98:98,0:98:3524:0:0:0,-29.5009,-317.368	0/1:12:3,9:3:108:9:324:-25.8935,0,-6.46281	0/1:59:24,35:24:864:35:1252:-95.2243,0,-60.3218	0/1:62:28,34:28:1008:34:1203:-89.9112,0,-72.3725	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/1:71:24,46:24:860:46:1639:-126.366,0,-56.29	0/1:49:14,35:14:504:35:1256:-98.5948,0,-30.9476	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:99:99,0:99:3543:0:0:0,-29.802,-319.078	0/0:86:86,0:86:3080:0:0:0,-25.8886,-277.428	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/0:69:69,0:69:2463:0:0:0,-20.7711,-221.924	0/0:173:170,3:170:6080:3:108:0,-42.003,-537.228	0/1:88:37,51:37:1324:51:1809:-136.592,0,-92.9715	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:126:46,80:46:1622:80:2851:-218.879,0,-108.335	0/1:126:30,96:30:1076:96:3382:-266.666,0,-59.2231	0/1:40:18,22:18:648:22:788:-59.2036,0,-46.6107	0/0:68:68,0:68:2448:0:0:0,-20.47,-220.574	0/1:45:31,14:31:1091:14:491:-30.9748,0,-84.9524	0/1:16:8,8:8:288:8:279:-20.6308,0,-21.4509	0/0:189:189,0:189:6771:0:0:0,-56.8947,-609.462	0/0:92:92,0:92:3291:0:0:0,-27.6948,-296.409	0/0:135:134,1:134:4803:1:36:0,-37.0408,-428.826	0/0:104:104,0:104:3719:0:0:0,-31.3071,-334.911	0/1:69:24,45:24:864:45:1603:-123.787,0,-57.3115	0/0:60:60,0:60:2144:0:0:0,-18.0618,-193.228	0/0:29:29,0:29:1023:0:0:0,-8.72987,-92.3817	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:130:130,0:130:4676:0:0:0,-39.1339,-420.999	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/1:79:32,47:32:1152:47:1663:-126.175,0,-80.2088	0/1:42:18,24:18:648:24:855:-64.6269,0,-46.0086	0/1:132:61,71:61:2184:71:2548:-189.834,0,-157.09	0/1:15:6,9:6:216:9:324:-24.9904,0,-15.2751	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/0:83:83,0:83:2980:0:0:0,-24.9855,-268.432	0/1:106:59,47:59:2101:47:1661:-117.863,0,-157.449	0/1:178:79,99:79:2832:99:3513:-262.796,0,-201.535	0/1:49:14,35:14:504:35:1252:-98.2346,0,-30.9476	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:69:69,0:69:2465:0:0:0,-20.7711,-222.102
chr07	24638302	.	A	T	225546	PASS	AB=0.476496;ABP=39.6558;AC=141;AF=0.75;AN=188;AO=11888;CIGAR=1X;DP=15915;DPB=15915;DPRA=0;EPP=25817.5;EPPR=8741.02;GTI=0;LEN=1;MEANALT=1.03191;MQM=39.8524;MQMR=53.4063;NS=94;NUMALT=1;ODDS=8.62378;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=413886;QR=143754;RO=4024;RPL=0;RPP=25817.5;RPPR=8741.02;RPR=11888;RUN=1;SAF=0;SAP=25817.5;SAR=11888;SRF=0;SRP=8741.02;SRR=4024;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:26,21:26:936:21:744:-47.793,0,-69.8677	0/1:312:169,143:169:6010:143:4972:-327.382,0,-442.879	0/1:230:132,98:132:4725:98:3438:-221.63,0,-353.653	1/1:367:0,367:0:0:367:12754:-1115.08,-110.478,0	1/1:96:2,94:2:72:94:3274:-276.468,-22.0719,0	1/1:84:0,84:0:0:84:2958:-249.091,-25.2865,0	0/1:230:110,120:110:3903:120:4211:-298.433,0,-281.261	1/1:312:6,306:6:216:306:10565:-874.674,-74.1806,0	1/1:98:0,98:0:0:98:3371:-285.49,-29.5009,0	0/1:145:70,75:70:2512:75:2632:-185.678,0,-182.354	1/1:154:0,154:0:0:154:5393:-468.479,-46.3586,0	0/1:84:46,38:46:1633:38:1285:-81.2952,0,-121.174	0/1:70:38,32:38:1359:32:1118:-73.1694,0,-99.1077	0/1:153:73,80:73:2619:80:2754:-189.983,0,-189.127	0/1:70:36,34:36:1262:34:1187:-82.2704,0,-92.5448	1/1:69:0,69:0:0:69:2403:-206.247,-20.7711,0	1/1:114:0,114:0:0:114:3982:-335.624,-34.3174,0	1/1:86:0,86:0:0:86:3039:-255.161,-25.8886,0	1/1:54:0,54:0:0:54:1876:-158.179,-16.2556,0	0/1:527:281,246:281:10022:246:8535:-589.665,0,-739.881	1/1:191:1,190:1:36:190:6589:-565.738,-53.9036,0	1/1:225:0,225:0:0:225:7860:-681.271,-67.7318,0	1/1:96:0,96:0:0:96:3385:-295.772,-28.8989,0	1/1:185:1,184:1:36:184:6328:-540.097,-52.0974,0	0/1:135:77,58:77:2753:58:1984:-130.232,0,-206.834	0/1:559:301,258:301:10740:258:9035:-615.215,0,-794.641	1/1:361:0,361:0:0:361:12474:-1076.87,-108.672,0	0/1:36:15,21:15:525:21:748:-53.9599,0,-36.5467	1/1:514:0,514:0:0:514:17905:-1557.48,-154.729,0	0/1:302:148,154:148:5316:154:5358:-369.902,0,-386.221	1/1:263:0,263:0:0:263:9243:-805.193,-79.1709,0	1/1:8:0,8:0:0:8:284:-24.9273,-2.40824,0	1/1:52:0,52:0:0:52:1820:-155.632,-15.6536,0	0/1:11:8,3:8:288:3:108:-6.17395,0,-22.6948	0/1:19:11,8:11:396:8:262:-17.1747,0,-29.681	0/1:42:24,18:24:860:18:632:-41.3021,0,-64.2102	1/1:213:0,213:0:0:213:7465:-645.593,-64.1194,0	0/1:384:201,183:201:7176:183:6356:-429.931,0,-528.063	0/1:111:57,54:57:2031:54:1866:-125.386,0,-148.334	0/1:5:3,2:3:108:2:72:-5.05838,0,-8.55573	0/1:276:140,136:140:5013:136:4791:-330.548,0,-366.743	1/1:68:0,68:0:0:68:2300:-200.189,-20.47,0	0/1:277:151,126:151:5405:126:4382:-295.667,0,-401.876	0/1:70:30,40:30:1071:40:1389:-100.006,0,-75.391	0/1:76:30,46:30:1067:46:1542:-112.675,0,-71.9661	1/1:119:0,119:0:0:119:4127:-358.397,-35.8226,0	1/1:174:1,173:1:36:173:6019:-507.643,-48.7962,0	0/1:312:158,154:158:5635:154:5439:-377.681,0,-411.153	1/1:160:0,160:0:0:160:5581:-486.261,-48.1648,0	1/1:299:1,297:1:36:297:10359:-903.036,-86.4662,0	1/1:275:0,275:0:0:275:9562:-833.268,-82.7833,0	0/1:34:17,17:17:603:17:599:-42.6555,0,-44.2423	0/1:256:140,116:140:5023:116:4004:-263.737,0,-373.706	0/1:199:101,98:101:3636:98:3435:-237.956,0,-267.035	1/1:40:0,40:0:0:40:1387:-116.722,-12.0412,0	0/1:256:158,98:158:5662:98:3374:-211.28,0,-431.105	0/1:37:13,24:13:464:24:827:-61.9548,0,-30.7614	0/1:27:16,11:16:576:11:375:-24.9962,0,-43.9916	1/1:49:0,49:0:0:49:1727:-150.275,-14.7505,0	1/1:153:0,153:0:0:153:5338:-458.961,-46.0576,0	1/1:192:0,192:0:0:192:6696:-583.97,-57.7978,0	0/1:22:9,13:9:320:13:452:-33.46,0,-22.4989	1/1:371:2,369:2:72:369:12888:-1115.36,-104.852,0	1/1:349:7,342:7:252:342:11874:-1014.6,-82.0735,0	0/1:170:92,78:92:3289:78:2755:-185.684,0,-244.39	1/1:139:0,139:0:0:139:4861:-422.589,-41.8432,0	0/1:257:101,156:101:3619:156:5467:-397.398,0,-247.047	0/1:319:219,99:219:7821:99:3477:-208.161,0,-604.47	0/1:58:19,39:19:684:39:1336:-98.7483,0,-44.2137	1/1:107:2,105:2:72:105:3638:-300.061,-25.3907,0	0/1:105:56,49:56:1999:49:1671:-113.9,0,-147.969	0/1:27:16,11:16:548:11:376:-24.9474,0,-41.1585	1/1:167:0,167:0:0:167:5798:-486.235,-50.272,0	1/1:101:0,101:0:0:101:3461:-292.898,-30.404,0	0/1:341:143,198:143:5107:198:6926:-491.429,0,-354.914	1/1:340:0,340:0:0:340:11847:-1035.94,-102.35,0	0/1:293:169,124:169:6025:124:4383:-279.663,0,-451.668	1/1:204:2,202:2:72:202:7021:-588.571,-54.5906,0	1/1:12:0,12:0:0:12:420:-35.9439,-3.61236,0	1/1:189:0,189:0:0:189:6547:-564.963,-56.8947,0	1/1:239:0,239:0:0:239:8304:-700.624,-71.9462,0	1/1:404:2,402:2:72:402:14012:-1212.32,-114.784,0	1/1:119:0,119:0:0:119:4139:-360.783,-35.8226,0	0/1:101:50,51:50:1783:51:1795:-127.431,0,-130.141	0/1:103:63,39:63:2255:39:1367:-87.6918,0,-171.586	0/1:149:72,77:72:2584:77:2662:-188.642,0,-187.307	0/1:35:14,21:14:500:21:752:-53.4103,0,-34.5016	1/1:79:0,79:0:0:79:2730:-229.433,-23.7814,0	1/1:90:0,90:0:0:90:3086:-261.38,-27.0927,0	0/1:127:70,57:70:2494:57:2015:-136,0,-185.494	0/1:190:89,101:89:3178:101:3513:-243.471,0,-227.268	0/1:48:34,14:34:1211:14:498:-28.5631,0,-94.5066	1/1:184:0,184:0:0:184:6382:-555.634,-55.3895,0	1/1:113:1,112:1:36:112:3915:-337.864,-30.4207,0
chr07	24638320	.	GAC	AGA,AAA	329745	PASS	AB=0.482518,0.514441;ABP=23.9647,17.31;AC=141,47;AF=0.75,0.25;AN=188;AO=12433,4090;CIGAR=3X,1X1M1X;DP=16581;DPB=16581;DPRA=0,1.28294;EPP=26870.8,8814.98;EPPR=13.8677;GTI=0;LEN=3,3;MEANALT=2.14894,2.5082;MQM=39.8382,53.3594;MQMR=37.6;NS=94;NUMALT=2;ODDS=10.3301;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=433912,143287;QR=167;RO=5;RPL=15,8;RPP=26870.8,8814.98;RPPR=13.8677;RPR=12418,4082;RUN=1,1;SAF=0,0;SAP=27000.9,8884.33;SAR=12433,4090;SRF=0;SRP=13.8677;SRR=5;TYPE=mnp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:53:0,25,28:0:0:25,28:880,981:-145.388,-79.8091,-72.2834,-65.9146,0,-57.4858	1/2:321:0,151,169:0:0:151,169:5293,5928:-880.686,-479.409,-433.954,-401.403,0,-350.529	1/2:239:0,104,135:0:0:104,135:3640,4701:-656.436,-380.327,-349.02,-276.445,0,-235.806	1/1:389:0,386,0:0:0:386,0:13360,0:-1169.76,-116.198,0,-1169.76,-116.198,-1169.76	1/1:104:0,102,2:0:0:102,2:3585,64:-308.772,-30.7051,0,-303.622,-25.2346,-303.02	1/1:85:0,85,0:0:0:85,0:2965,0:-251.325,-25.5876,0,-251.325,-25.5876,-251.325	1/2:242:0,129,113:0:0:129,113:4481,3908:-669.791,-316.986,-278.153,-353.146,0,-319.129	1/1:334:0,326,6:0:0:326,6:11245,208:-950.855,-98.1358,0,-933.99,-81.2195,-932.184	1/1:104:0,102,0:0:0:102,0:3506,0:-296.468,-30.7051,0,-296.468,-30.7051,-296.468	1/2:148:0,77,70:0:0:77,70:2681,2475:-411.489,-201.258,-178.079,-210.226,0,-189.154	1/1:158:0,158,0:0:0:158,0:5525,0:-481.16,-47.5627,0,-481.16,-47.5627,-481.16	1/2:85:0,38,47:0:0:38,47:1342,1667:-233.464,-135.359,-123.92,-98.4403,0,-84.2919	1/2:73:0,34,39:0:0:34,39:1202,1333:-197.664,-107.198,-96.9628,-90.799,0,-79.0588	1/2:156:1,81,74:1:36:81,74:2835,2589:-424.664,-207.184,-185.609,-214.968,0,-195.5	1/2:72:0,36,36:0:0:36,36:1280,1280:-204.445,-104.401,-93.5644,-100.392,0,-89.5547	1/1:70:2,66,0:2:61:66,0:2346,0:-195.801,-15.3077,0,-196.403,-19.868,-200.974	1/1:115:0,115,0:0:0:115,0:4044,0:-339.984,-34.6185,0,-339.984,-34.6185,-339.984	1/1:87:0,86,0:0:0:86,0:3027,0:-253.563,-25.8886,0,-253.563,-25.8886,-253.563	1/1:56:0,55,0:0:0:55,0:1923,0:-161.013,-16.5567,0,-161.013,-16.5567,-161.013	1/2:548:0,262,285:0:0:262,285:9186,10006:-1535.27,-811.389,-732.519,-723.875,0,-638.081	1/1:201:0,200,1:0:0:200,1:6921,36:-596.905,-60.206,0,-593.972,-56.9139,-593.671	1/1:236:0,236,0:0:0:236,0:8258,0:-716.797,-71.0431,0,-716.797,-71.0431,-716.797	1/1:101:0,101,0:0:0:101,0:3500,0:-306.454,-30.404,0,-306.454,-30.404,-306.454	1/1:193:0,193,0:0:0:193,0:6749,0:-578.381,-58.0988,0,-578.381,-58.0988,-578.381	1/2:139:0,60,78:0:0:60,78:2094,2720:-382.061,-220.58,-202.519,-161.474,0,-137.994	1/2:577:0,269,304:0:0:269,304:9331,10670:-1593.77,-865.11,-784.132,-728.731,0,-637.218	1/1:382:0,381,0:0:0:381,0:13222,0:-1141.38,-114.692,0,-1141.38,-114.692,-1141.38	1/2:37:0,22,15:0:0:22,15:790,538:-105.159,-44.0433,-37.4207,-61.4669,0,-56.9514	1/1:534:0,533,1:0:0:533,1:18657,34:-1621.86,-160.449,0,-1619.11,-157.353,-1618.81	1/2:315:0,162,153:0:0:162,153:5637,5381:-872.484,-437.157,-388.39,-435.668,0,-389.611	1/1:274:0,273,0:0:0:273,0:9537,0:-829.59,-82.1812,0,-829.59,-82.1812,-829.59	1/1:8:0,8,0:0:0:8,0:282,0:-24.8023,-2.40824,0,-24.8023,-2.40824,-24.8023	1/1:55:0,55,0:0:0:55,0:1949,0:-167.333,-16.5567,0,-167.333,-16.5567,-167.333	1/2:11:0,3,8:0:0:3,8:102,280:-30.7071,-22.8761,-21.973,-8.16085,0,-5.75261	1/2:21:0,9,12:0:0:9,12:314,414:-57.4444,-33.404,-30.6947,-24.3748,0,-20.7624	1/2:42:0,18,24:0:0:18,24:644,862:-118.781,-69.8073,-64.3888,-49.3177,0,-42.0929	1/1:218:0,216,1:0:0:216,1:7578,36:-655.715,-65.0225,0,-652.781,-62.0827,-652.48	1/2:395:0,190,205:0:0:190,205:6585,7132:-1087.27,-578.195,-520.999,-509.418,0,-447.707	1/2:112:0,54,58:0:0:54,58:1910,2058:-312.137,-166.989,-150.733,-145.49,0,-128.031	1/2:5:0,2,3:0:0:2,3:72,108:-14.7683,-9.15779,-8.55573,-5.96147,0,-5.05838	1/2:290:0,145,144:0:0:145,144:5064,5045:-802.515,-408.734,-365.085,-393.915,0,-350.566	1/1:70:0,70,0:0:0:70,0:2472,0:-213.368,-21.0721,0,-213.368,-21.0721,-213.368	1/2:284:0,130,151:0:0:130,151:4476,5258:-774.157,-426.74,-387.606,-347.475,0,-302.02	1/2:72:0,41,31:0:0:41,31:1451,1079:-201.433,-87.8797,-75.5375,-113.898,0,-104.566	1/2:79:0,49,30:0:0:49,30:1636,1028:-210.17,-82.4061,-67.6557,-128.096,0,-119.065	1/1:123:0,123,0:0:0:123,0:4328,0:-376.401,-37.0267,0,-376.401,-37.0267,-376.401	1/1:177:0,175,1:0:0:175,1:6127,36:-518.805,-52.6803,0,-515.881,-49.7468,-515.58	1/2:325:0,165,160:0:0:165,160:5739,5614:-903.774,-455.622,-405.952,-448.494,0,-400.329	1/1:183:0,182,0:0:0:182,0:6354,0:-552.916,-54.7875,0,-552.916,-54.7875,-552.916	1/1:316:0,313,1:0:0:313,1:10936,36:-955.143,-94.2224,0,-952.208,-91.2738,-951.907	1/1:285:0,283,0:0:0:283,0:9930,0:-864.438,-85.1915,0,-864.438,-85.1915,-864.438	1/2:35:0,17,17:0:0:17,17:595,612:-96.9407,-49.8889,-44.7714,-47.1176,0,-42.0001	1/2:264:0,124,139:0:0:124,139:4353,4912:-729.945,-398.771,-361.443,-331.194,0,-289.351	1/2:205:0,101,103:0:0:101,103:3556,3596:-570.154,-292.073,-261.669,-278.119,0,-247.113	1/1:40:0,40,0:0:0:40,0:1418,0:-119.032,-12.0412,0,-119.032,-12.0412,-119.032	1/2:273:0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chr07	24638332	.	T	C	66995.1	PASS	AB=0.510641;ABP=10.6817;AC=47;AF=0.25;AN=188;AO=4019;CIGAR=1X;DP=16505;DPB=16505;DPRA=1.21672;EPP=8669.46;EPPR=26049.5;GTI=0;LEN=1;MEANALT=1.06452;MQM=53.3125;MQMR=40.0557;NS=94;NUMALT=1;ODDS=8.35792;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=142603;QR=445147;RO=12482;RPL=4012;RPP=8669.46;RPPR=26049.5;RPR=7;RUN=1;SAF=0;SAP=8730.16;SAR=4019;SRF=0;SRP=27107.3;SRR=12482;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:24,27:24:864:27:961:-70.8905,0,-56.3566	0/1:320:153,167:153:5442:167:5918:-432.248,0,-361.268	0/1:234:103,131:103:3704:131:4632:-344.291,0,-240.233	0/0:389:389,0:389:13814:0:0:0,-117.101,-1203.62	0/0:102:100,2:100:3550:2:72:0,-23.878,-298.997	0/0:85:85,0:85:3044:0:0:0,-25.5875,-255.272	0/1:237:129,108:129:4605:108:3796:-269.645,0,-329.438	0/0:335:329,6:329:11715:6:216:0,-81.1043,-964.276	0/0:107:107,0:107:3798:0:0:0,-32.2102,-319.12	0/1:148:78,70:78:2796:70:2486:-179.193,0,-198.147	0/0:157:157,0:157:5620:0:0:0,-47.2617,-487.326	0/1:81:37,44:37:1324:44:1580:-116.38,0,-84.0332	0/1:72:33,39:33:1169:39:1389:-101.04,0,-77.7844	0/1:152:80,72:80:2868:72:2580:-186.184,0,-199.027	0/1:71:35,36:35:1260:36:1296:-95.3033,0,-87.8923	0/0:69:69,0:69:2439:0:0:0,-20.7711,-207.96	0/0:114:114,0:114:4069:0:0:0,-34.3174,-340.779	0/0:84:84,0:84:3012:0:0:0,-25.2865,-251.861	0/0:55:55,0:55:1976:0:0:0,-16.5566,-165.028	0/1:534:259,275:259:9246:275:9717:-710.088,0,-645.614	0/0:197:196,1:196:6982:1:36:0,-55.7097,-595.982	0/0:238:238,0:238:8486:0:0:0,-71.6451,-735.484	0/0:102:102,0:102:3622:0:0:0,-30.7051,-315.998	0/0:196:196,0:196:7016:0:0:0,-59.0019,-598.501	0/1:138:61,77:61:2176:77:2722:-203.184,0,-144.861	0/1:579:275,304:275:9782:304:10719:-784.313,0,-674.446	0/0:379:379,0:379:13502:0:0:0,-114.09,-1160.35	0/1:36:21,15:21:752:15:525:-36.5467,0,-54.1332	0/0:540:538,2:538:19169:2:72:0,-157.196,-1658.09	0/1:315:162,153:162:5746:153:5450:-394.363,0,-397.083	0/0:277:277,0:277:9867:0:0:0,-83.3853,-856.456	0/0:8:8,0:8:288:0:0:0,-2.40824,-25.2178	0/0:55:55,0:55:1961:0:0:0,-16.5566,-167.082	0/1:11:3,8:3:108:8:288:-22.6948,0,-6.17395	0/1:19:9,10:9:320:10:341:-25.2231,0,-21.7992	0/1:41:17,24:17:612:24:856:-64.1554,0,-39.5861	0/0:220:220,0:220:7869:0:0:0,-66.2266,-679.618	0/1:395:192,203:192:6766:203:7234:-529.87,0,-460.197	0/1:111:53,58:53:1900:58:2072:-152.107,0,-126.804	0/1:5:2,3:2:72:3:108:-8.55573,0,-5.05838	0/1:289:149,140:149:5336:140:4961:-357.636,0,-371.443	0/0:70:70,0:70:2485:0:0:0,-21.0721,-213.986	0/1:281:130,151:130:4591:151:5363:-396.916,0,-311.234	0/1:73:42,31:42:1504:31:1116:-78.5336,0,-108.994	0/1:73:50,22:50:1788:22:746:-45.3299,0,-133.126	0/0:127:127,0:127:4560:0:0:0,-38.2308,-394.61	0/0:181:180,1:180:6452:1:36:0,-50.9034,-540.911	0/1:322:167,155:167:5938:155:5463:-393.624,0,-416.969	0/0:182:182,0:182:6490:0:0:0,-54.7875,-562.752	0/0:310:309,1:309:11023:1:36:0,-89.7236,-957.148	0/0:288:288,0:288:10297:0:0:0,-86.6966,-894.353	0/1:35:18,17:18:644:17:612:-44.7532,0,-46.2464	0/1:263:124,139:124:4452:139:4958:-366.015,0,-296.147	0/1:206:103,103:103:3673:103:3665:-267.549,0,-255.64	0/0:41:41,0:41:1472:0:0:0,-12.3422,-123.27	0/1:265:110,154:110:3902:154:5413:-406.376,0,-249.772	0/1:42:28,14:28:996:14:504:-32.2246,0,-74.7936	0/1:27:11,16:11:392:16:576:-43.9916,0,-26.3253	0/0:54:54,0:54:1920:0:0:0,-16.2556,-166.468	0/0:159:159,0:159:5704:0:0:0,-47.8638,-487.872	0/0:200:199,1:199:7144:1:36:0,-58.1194,-619.816	0/1:23:14,9:14:504:9:309:-21.198,0,-37.5606	0/0:409:407,2:407:14486:2:72:0,-116.292,-1249.84	0/0:367:360,7:360:12866:7:248:0,-87.8398,-1096.07	0/1:171:78,93:78:2796:93:3340:-248.668,0,-188.781	0/0:151:151,0:151:5385:0:0:0,-45.4555,-466.891	0/1:265:162,103:162:5781:103:3662:-249.036,0,-421.021	0/1:325:103,222:103:3662:222:7861:-605.921,0,-221.762	0/1:58:38,19:38:1368:19:684:-44.3065,0,-100.568	0/0:116:113,2:113:4026:2:72:0,-28.0507,-330.538	0/1:104:49,55:49:1764:55:1957:-144.496,0,-121.161	0/1:25:11,14:11:392:14:495:-37.1959,0,-25.8573	0/0:175:175,0:175:6222:0:0:0,-52.6802,-518.385	0/0:107:107,0:107:3817:0:0:0,-32.2102,-320.372	0/1:346:204,142:204:7228:142:5041:-346.779,0,-514.798	0/0:361:361,0:361:12842:0:0:0,-108.672,-1119.39	0/1:292:127,165:127:4541:165:5864:-437.621,0,-292.322	0/0:208:206,2:206:7347:2:72:0,-55.7947,-612.714	0/0:14:14,0:14:504:0:0:0,-4.21442,-42.7815	0/0:198:198,0:198:7065:0:0:0,-59.6039,-605.119	0/0:251:251,0:251:8963:0:0:0,-75.5585,-749.288	0/0:423:421,2:421:14973:2:72:0,-120.504,-1292.46	0/0:120:120,0:120:4243:0:0:0,-36.1236,-368.923	0/1:102:53,49:53:1888:49:1760:-127.77,0,-135.031	0/1:109:43,66:43:1532:66:2310:-174.585,0,-100.266	0/1:154:81,73:81:2908:73:2590:-186.422,0,-206.45	0/1:35:22,13:22:788:13:468:-31.6282,0,-56.4593	0/0:83:83,0:83:2968:0:0:0,-24.9855,-247.886	0/0:93:92,1:92:3292:1:36:0,-25.6223,-275.382	0/1:128:58,70:58:2084:70:2520:-187.515,0,-141.229	0/1:191:100,91:100:3572:91:3215:-230.404,0,-247.437	0/1:46:13,33:13:468:33:1188:-93.0406,0,-26.3849	0/0:195:192,3:192:6857:3:108:0,-50.884,-588.795	0/0:113:110,3:110:3941:3:108:0,-25.2419,-335.141
chr07	24702068	.	T	A	54698	PASS	AB=0.653937;ABP=957.019;AC=43;AF=0.228723;AN=188;AO=3046;CIGAR=1X;DP=9169;DPB=9169;DPRA=1.25968;EPP=6617.32;EPPR=13292.4;GTI=5;LEN=1;MEANALT=1.04;MQM=58.7909;MQMR=39.2042;NS=94;NUMALT=1;ODDS=0.543898;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=108898;QR=218681;RO=6120;RPL=3046;RPP=6617.32;RPPR=13292.4;RPR=0;RUN=1;SAF=0;SAP=6617.32;SAR=3046;SRF=0;SRP=13292.4;SRR=6120;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:15:2,13:2:72:13:468:-37.9156,0,-2.04808	0/1:155:63,92:63:2252:92:3266:-247.338,0,-148.377	0/1:111:34,77:34:1215:77:2749:-214.093,0,-71.9381	0/0:166:166,0:166:5968:0:0:0,-49.971,-511.989	0/0:18:18,0:18:633:0:0:0,-5.41854,-54.8575	0/0:36:36,0:36:1296:0:0:0,-10.8371,-112.441	0/1:129:46,83:46:1594:83:2949:-226.624,0,-98.6877	0/0:128:128,0:128:4573:0:0:0,-38.5318,-395.695	0/0:70:70,0:70:2501:0:0:0,-21.0721,-215.871	0/1:219:105,114:105:3765:114:4077:-300.466,0,-252.977	0/0:60:60,0:60:2156:0:0:0,-18.0618,-182.597	0/1:87:34,53:34:1224:53:1896:-144.715,0,-79.7654	0/1:97:41,56:41:1472:56:2012:-151.976,0,-98.3048	0/1:75:38,37:38:1368:37:1328:-97.2446,0,-94.9497	0/1:93:34,59:34:1216:59:2120:-162.9,0,-76.8016	0/0:61:61,0:61:2192:0:0:0,-18.3628,-188.449	0/0:86:86,0:86:3084:0:0:0,-25.8886,-266.893	0/0:51:51,0:51:1828:0:0:0,-15.3525,-158.343	0/0:33:33,0:33:1169:0:0:0,-9.93399,-101.334	0/1:122:43,78:43:1533:78:2808:-216.016,0,-95.3994	0/0:129:129,0:129:4612:0:0:0,-38.8329,-396.058	0/0:29:29,0:29:1025:0:0:0,-8.72987,-87.3918	0/0:48:48,0:48:1712:0:0:0,-14.4494,-147.034	0/0:86:84,2:84:3004:2:72:0,-19.0519,-251.339	0/1:77:10,67:10:345:67:2404:-193.303,0,-6.92337	0/1:366:131,235:131:4680:235:8409:-645.603,0,-288.158	0/0:150:150,0:150:5357:0:0:0,-45.1545,-458.94	0/1:49:23,26:23:828:26:936:-69.809,0,-56.7481	0/0:212:212,0:212:7539:0:0:0,-63.8184,-637.546	0/1:175:54,121:54:1944:121:4328:-336.977,0,-114.196	0/0:129:129,0:129:4602:0:0:0,-38.8329,-394.896	0/0:24:24,0:24:856:0:0:0,-7.22472,-73.745	0/0:24:24,0:24:864:0:0:0,-7.22472,-74.04	0/0:15:14,1:14:504:1:36:0,-0.917175,-40.2738	0/0:23:23,0:23:813:0:0:0,-6.92369,-70.0429	0/1:30:25,5:25:900:5:180:-7.52116,0,-69.0442	0/0:278:277,1:277:9879:1:36:0,-80.0891,-833.558	0/1:199:44,155:44:1568:155:5507:-434.198,0,-75.1271	0/1:65:35,30:35:1252:30:1068:-76.8504,0,-88.8982	0/1:7:6,1:6:216:1:36:-1.49107,0,-16.6516	0/1:193:47,146:47:1680:146:5244:-413.687,0,-86.2712	0/0:43:43,0:43:1536:0:0:0,-12.9443,-132.192	0/1:95:24,71:24:841:71:2525:-198.894,0,-43.9722	0/1:114:48,66:48:1716:66:2364:-178.632,0,-113.049	0/1:93:36,57:36:1288:57:2036:-155.45,0,-81.7618	0/0:70:70,0:70:2492:0:0:0,-21.0721,-210.869	0/0:51:51,0:51:1832:0:0:0,-15.3525,-158.674	0/1:225:68,157:68:2440:157:5623:-437.977,0,-140.767	0/0:81:81,0:81:2861:0:0:0,-24.3834,-243.207	0/0:103:101,2:101:3624:2:72:0,-24.1702,-303.278	0/0:50:50,0:50:1777:0:0:0,-15.0515,-149.104	0/0:34:32,2:32:1125:2:72:0,-3.39914,-90.3095	0/1:212:27,185:27:968:185:6599:-529.989,0,-20.1835	0/1:47:10,37:10:356:37:1312:-104.085,0,-16.494	0/0:53:53,0:53:1896:0:0:0,-15.9546,-163.301	0/1:144:43,101:43:1532:101:3610:-281.602,0,-88.3392	0/1:43:15,28:15:525:28:1004:-77.7213,0,-32.4665	0/1:5:4,1:4:144:1:36:-2.09212,0,-11.029	0/0:53:53,0:53:1888:0:0:0,-15.9546,-160.141	0/0:69:69,0:69:2457:0:0:0,-20.7711,-210.171	0/0:116:116,0:116:4153:0:0:0,-34.9195,-355.404	0/0:13:13,0:13:468:0:0:0,-3.91339,-40.5211	0/0:270:270,0:270:9634:0:0:0,-81.2781,-817.847	0/0:128:123,5:123:4400:5:180:0,-22.0726,-359.747	0/1:107:34,73:34:1220:73:2616:-203.352,0,-72.7785	0/0:72:72,0:72:2561:0:0:0,-21.6742,-220.097	0/1:113:45,68:45:1601:68:2413:-182.842,0,-101.624	0/1:117:32,85:32:1144:85:3045:-238.841,0,-62.377	0/1:28:17,11:17:597:11:392:-27.1912,0,-43.237	0/0:45:45,0:45:1612:0:0:0,-13.5463,-139.678	0/1:120:53,67:53:1885:67:2404:-180.381,0,-123.675	0/1:20:9,11:9:324:11:392:-29.5956,0,-22.0529	0/0:87:87,0:87:3124:0:0:0,-26.1896,-270.324	0/0:97:97,0:97:3457:0:0:0,-29.1999,-299.49	0/1:154:48,106:48:1724:106:3788:-294.56,0,-101.819	0/0:113:113,0:113:4060:0:0:0,-34.0164,-348.143	0/1:42:11,31:11:392:31:1112:-87.7123,0,-21.4228	0/0:165:165,0:165:5912:0:0:0,-49.6699,-511.461	0/0:172:172,0:172:6161:0:0:0,-51.7772,-532.401	0/0:106:106,0:106:3788:0:0:0,-31.9092,-324.591	0/0:52:52,0:52:1864:0:0:0,-15.6536,-160.662	0/0:145:145,0:145:5155:0:0:0,-43.6493,-441.687	0/0:119:117,2:117:4177:2:72:0,-28.9867,-351.162	0/1:67:24,43:24:856:43:1533:-117.996,0,-53.832	0/1:115:47,67:47:1677:67:2381:-179.849,0,-109.355	0/1:241:96,145:96:3448:145:5188:-394.244,0,-222.242	0/1:36:12,24:12:428:24:852:-66.1274,0,-26.7092	0/0:67:67,0:67:2404:0:0:0,-20.169,-208.165	0/0:65:64,0:64:2300:0:0:0,-19.2659,-198.633	0/1:31:13,18:13:468:18:640:-48.5402,0,-31.2246	0/1:74:43,31:43:1548:31:1116:-78.2028,0,-111.148	0/1:128:28,100:28:1008:100:3592:-284.663,0,-48.1132	0/0:136:136,0:136:4869:0:0:0,-40.9401,-417.389	0/0:103:103,0:103:3673:0:0:0,-31.0061,-314.796
chr07	24702078	.	G	C	114847	PASS	AB=0.345727;ABP=953.737;AC=145;AF=0.771277;AN=188;AO=6033;CIGAR=1X;DP=9062;DPB=9062;DPRA=0;EPP=13103.5;EPPR=6556.51;GTI=6;LEN=1;MEANALT=1.10638;MQM=39.1716;MQMR=58.8535;NS=94;NUMALT=1;ODDS=0.216186;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=215820;QR=107893;RO=3018;RPL=6033;RPP=13103.5;RPPR=6556.51;RPR=0;RUN=1;SAF=0;SAP=13103.5;SAR=6033;SRF=0;SRP=6556.51;SRR=3018;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:15:13,2:13:460:2:72:-2.04808,0,-37.2083	0/1:154:92,62:92:3264:62:2224:-146.099,0,-247.487	0/1:110:76,34:76:2712:34:1220:-72.6521,0,-211.104	1/1:165:0,164:0:0:164:5854:-502.335,-49.3689,0	1/1:16:0,16:0:0:16:576:-49.8999,-4.81648,0	1/1:36:0,36:0:0:36:1280:-111.221,-10.8371,0	0/1:128:81,45:81:2908:45:1612:-99.6044,0,-223.501	1/1:126:0,126:0:0:126:4502:-389.399,-37.9298,0	1/1:68:0,67:0:0:67:2370:-204.251,-20.169,0	0/1:218:113,105:113:4048:105:3745:-251.836,0,-298.183	1/1:56:0,56:0:0:56:2008:-170.505,-16.8577,0	0/1:86:52,34:52:1860:34:1224:-80.0665,0,-141.789	0/1:99:58,41:58:2088:41:1468:-97.3418,0,-158.211	0/1:77:39,38:39:1392:38:1368:-94.3476,0,-102.385	0/1:91:56,34:56:1992:34:1212:-77.0771,0,-151.998	1/1:60:0,60:0:0:60:2145:-184.122,-18.0618,0	1/1:85:0,85:0:0:85:3030:-262.067,-25.5876,0	1/1:51:0,51:0:0:51:1821:-157.704,-15.3525,0	1/1:33:0,33:0:0:33:1188:-102.931,-9.93399,0	0/1:123:80,43:80:2880:43:1540:-95.8777,0,-222.245	1/1:131:0,131:0:0:131:4644:-398.749,-39.4349,0	1/1:28:0,28:0:0:28:1008:-85.7388,-8.42884,0	1/1:47:0,47:0:0:47:1676:-143.984,-14.1484,0	1/1:84:1,83:1:36:83:2980:-252.279,-21.6882,0	0/1:76:66,10:66:2368:10:356:-8.07223,0,-190.41	0/1:365:234,131:234:8336:131:4700:-289.747,0,-639.447	1/1:148:0,148:0:0:148:5262:-451.115,-44.5524,0	0/1:48:25,23:25:888:23:828:-57.0491,0,-65.7896	1/1:211:0,210:0:0:210:7501:-634.056,-63.2163,0	0/1:175:121,54:121:4328:54:1925:-112.635,0,-336.971	1/1:125:0,125:0:0:125:4458:-382.259,-37.6288,0	1/1:24:0,24:0:0:24:864:-74.2922,-7.22472,0	1/1:23:0,23:0:0:23:824:-70.685,-6.92369,0	1/1:15:1,14:1:36:14:500:-39.985,-0.917175,0	1/1:22:0,22:0:0:22:788:-68.4876,-6.62266,0	0/1:30:4,26:4:140:26:917:-70.6364,0,-3.91368	1/1:274:1,273:1:36:273:9744:-821.835,-78.885,0	0/1:195:153,42:153:5492:42:1488:-69.5347,0,-433.971	0/1:65:30,35:30:1072:35:1230:-87.0378,0,-77.1806	0/1:7:1,6:1:36:6:212:-16.3742,0,-1.49106	0/1:191:144,47:144:5156:47:1692:-87.7063,0,-406.458	1/1:42:0,42:0:0:42:1512:-129.888,-12.6433,0	0/1:97:73,24:73:2608:24:860:-44.8466,0,-205.759	0/1:109:64,45:64:2288:45:1620:-106.44,0,-173.302	0/1:95:59,36:59:2100:36:1296:-81.706,0,-160.606	1/1:70:0,70:0:0:70:2516:-212.66,-21.0721,0	1/1:50:0,50:0:0:50:1796:-155.484,-15.0515,0	0/1:221:153,68:153:5468:68:2444:-142.216,0,-425.32	1/1:80:0,80:0:0:80:2850:-241.653,-24.0824,0	1/1:99:2,97:2:72:97:3476:-291.398,-22.9661,0	1/1:50:0,50:0:0:50:1773:-148.805,-15.0515,0	1/1:32:2,30:2:72:30:1065:-84.742,-2.79708,0	0/1:209:182,27:182:6480:27:972:-21.3743,0,-520.203	0/1:46:37,9:37:1316:9:305:-12.4943,0,-104.762	1/1:53:0,53:0:0:53:1904:-163.875,-15.9546,0	0/1:142:100,42:100:3572:42:1512:-86.9521,0,-278.797	0/1:43:28,15:28:1008:15:540:-33.6727,0,-78.0816	0/1:5:1,4:1:32:4:144:-11.029,0,-1.69376	1/1:49:0,49:0:0:49:1752:-148.258,-14.7505,0	1/1:67:0,67:0:0:67:2408:-205.85,-20.169,0	1/1:111:1,110:1:32:110:3945:-334.002,-30.2178,0	1/1:13:0,13:0:0:13:468:-40.5211,-3.91339,0	1/1:269:1,268:1:21:268:9601:-812.427,-78.8774,0	1/1:126:3,121:3:108:121:4328:-359.547,-27.6106,0	0/1:105:71,34:71:2544:34:1209:-72.4525,0,-197.522	1/1:72:0,72:0:0:72:2573:-220.915,-21.6742,0	0/1:114:69,44:69:2464:44:1565:-97.8764,0,-187.034	0/1:117:86,31:86:3096:31:1101:-58.5884,0,-243.43	0/1:29:11,18:11:396:18:648:-47.2503,0,-27.2529	1/1:46:0,46:0:0:46:1648:-142.787,-13.8474,0	0/1:122:68,54:68:2424:54:1921:-126.106,0,-181.58	0/1:20:11,9:11:396:9:324:-22.0529,0,-29.9574	1/1:86:0,86:0:0:86:3077:-265.379,-25.8886,0	1/1:95:0,95:0:0:95:3416:-295.786,-28.5979,0	0/1:155:106,49:106:3796:49:1752:-103.985,0,-295.097	1/1:111:0,111:0:0:111:3973:-340.962,-33.4143,0	0/1:42:31,11:31:1112:11:396:-21.7123,0,-87.7123	1/1:164:0,164:0:0:164:5873:-508.115,-49.3689,0	1/1:170:0,170:0:0:170:6104:-527.187,-51.1751,0	1/1:105:0,105:0:0:105:3761:-321.947,-31.6082,0	1/1:51:0,51:0:0:51:1836:-158.225,-15.3525,0	1/1:146:0,146:0:0:146:5248:-449.488,-43.9504,0	1/1:116:2,113:2:72:113:4048:-339.702,-28.1307,0	0/1:64:41,23:41:1468:23:820:-51.5107,0,-113.055	0/1:116:66,50:66:2356:50:1777:-117.892,0,-177.355	0/1:234:142,91:142:5088:91:3253:-208.633,0,-387.394	0/1:36:24,12:24:860:12:428:-26.7092,0,-66.8489	1/1:67:0,67:0:0:67:2397:-207.439,-20.169,0	1/1:63:0,63:0:0:63:2268:-196.215,-18.9649,0	0/1:29:16,13:16:568:13:468:-31.8267,0,-42.6657	0/1:72:31,41:31:1108:41:1476:-105.499,0,-78.0842	0/1:124:96,28:96:3440:28:1008:-49.3173,0,-272.24	1/1:134:0,134:0:0:134:4793:-411.111,-40.338,0	1/1:98:0,98:0:0:98:3516:-301.882,-29.5009,0
chr07	24970711	.	G	A	82689.1	PASS	AB=0.495403;ABP=4.86705;AC=47;AF=0.25;AN=188;AO=5037;CIGAR=1X;DP=18664;DPB=18664;DPRA=1.50042;EPP=10940.7;EPPR=29580.6;GTI=0;LEN=1;MEANALT=1.06452;MQM=52.7433;MQMR=59.4958;NS=94;NUMALT=1;ODDS=12.0658;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=178482;QR=481736;RO=13621;RPL=0;RPP=10940.7;RPPR=29580.6;RPR=5037;RUN=1;SAF=0;SAP=10940.7;SAR=5037;SRF=0;SRP=29580.6;SRR=13621;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:25:16,9:16:558:9:320:-21.3614,0,-42.997	0/1:47:25,22:25:883:22:788:-56.9213,0,-65.6135	0/1:133:60,73:60:2152:73:2592:-191.865,0,-153.624	0/0:105:105,0:105:3703:0:0:0,-31.6081,-333.464	0/0:41:40,1:40:1416:1:32:0,-9.14496,-124.513	0/0:47:47,0:47:1670:0:0:0,-14.1484,-150.586	0/1:63:40,23:40:1414:23:815:-54.652,0,-108.584	0/0:74:74,0:74:2638:0:0:0,-22.2762,-237.645	0/0:95:92,3:92:3275:3:99:0,-19.38,-285.493	0/1:76:38,38:38:1347:38:1345:-98.2894,0,-98.6489	0/0:522:522,0:522:18397:0:0:0,-157.138,-1654.86	0/1:135:85,50:85:3003:50:1778:-118.364,0,-229.812	0/1:120:69,51:69:2412:51:1806:-126.086,0,-180.775	0/1:61:43,18:43:1513:18:640:-39.2188,0,-118.078	0/1:126:69,57:69:2425:57:2035:-144.977,0,-180.576	0/0:169:169,0:169:6008:0:0:0,-50.8741,-540.762	0/0:61:61,0:61:2161:0:0:0,-18.3628,-194.699	0/0:61:61,0:61:2169:0:0:0,-18.3628,-195.459	0/0:175:175,0:175:6209:0:0:0,-52.6802,-558.827	0/1:55:37,18:37:1315:18:640:-41.3332,0,-102.089	0/0:359:358,1:358:12608:1:36:0,-104.477,-1130.04	0/0:90:90,0:90:3193:0:0:0,-27.0927,-287.538	0/0:91:91,0:91:3220:0:0:0,-27.3937,-290.01	0/0:42:42,0:42:1496:0:0:0,-12.6433,-134.925	0/1:49:21,28:21:756:28:996:-74.4535,0,-53.6168	0/1:170:58,112:58:2054:112:3981:-306.476,0,-133.939	0/0:251:251,0:251:8916:0:0:0,-75.5585,-802.253	0/1:43:28,15:28:995:15:540:-35.905,0,-76.9151	0/0:224:224,0:224:7917:0:0:0,-67.4307,-712.488	0/1:60:24,36:24:832:36:1284:-97.5153,0,-57.132	0/0:117:116,0:116:4117:0:0:0,-34.9195,-370.367	0/0:606:600,5:600:21244:5:176:0,-166.317,-1894.72	0/0:270:269,1:269:9454:1:36:0,-77.8236,-847.159	0/1:824:246,578:246:8692:578:20438:-1577.09,0,-533.581	0/1:1186:455,731:455:15966:731:25888:-1959.64,0,-1078.74	0/1:822:418,403:418:14723:403:14265:-1028.67,0,-1075.68	0/0:259:259,0:259:9138:0:0:0,-77.9668,-822.351	0/1:111:63,48:63:2218:48:1720:-120.719,0,-166.437	0/1:274:181,93:181:6407:93:3291:-212.347,0,-494.197	0/1:419:208,211:208:7394:211:7459:-541.268,0,-539.116	0/1:48:36,12:36:1270:12:420:-23.6373,0,-100.121	0/0:328:327,1:327:11502:1:36:0,-95.1447,-1031.32	0/1:78:47,31:47:1654:31:1116:-76.3701,0,-125.626	0/1:60:44,16:44:1563:16:572:-33.7071,0,-122.885	0/1:71:51,20:51:1802:20:707:-42.5334,0,-140.524	0/0:116:116,0:116:4082:0:0:0,-34.9195,-366.702	0/0:82:82,0:82:2887:0:0:0,-24.6845,-260.052	0/1:158:93,65:93:3311:65:2284:-156.542,0,-250.632	0/0:113:113,0:113:4036:0:0:0,-34.0164,-363.368	0/0:68:68,0:68:2419:0:0:0,-20.47,-217.961	0/0:107:107,0:107:3814:0:0:0,-32.2102,-343.39	0/1:414:250,164:250:8881:164:5840:-399.598,0,-674.54	0/1:70:38,32:38:1360:32:1152:-82.0329,0,-101.61	0/1:36:24,12:24:860:12:432:-28.3437,0,-66.8834	0/0:394:393,0:393:13896:0:0:0,-118.305,-1249.03	0/1:64:39,25:39:1392:25:896:-61.4576,0,-106.308	0/1:47:26,21:26:927:21:752:-53.6409,0,-69.5102	0/0:338:338,0:338:11905:0:0:0,-101.748,-1071.27	0/0:581:578,3:578:20481:3:108:0,-165.045,-1832.43	0/0:78:77,1:77:2716:1:36:0,-19.8872,-241.061	0/0:131:130,1:130:4617:1:36:0,-35.8392,-411.708	0/1:310:141,169:141:4985:169:5984:-444.036,0,-355.438	0/0:134:134,0:134:4779:0:0:0,-40.338,-430.218	0/0:172:172,0:172:6065:0:0:0,-51.7772,-544.722	0/1:26:16,10:16:561:10:351:-23.5662,0,-42.9903	0/0:26:26,0:26:909:0:0:0,-7.82678,-82.1232	0/1:119:71,48:71:2525:48:1688:-115.682,0,-190.889	0/1:132:55,77:55:1960:77:2703:-203.292,0,-136.88	0/1:309:195,114:195:6918:114:4057:-270.069,0,-529.438	0/0:33:33,0:33:1139:0:0:0,-9.93399,-102.755	0/1:100:50,50:50:1788:50:1783:-130.386,0,-131.096	0/1:684:388,296:388:13716:296:10479:-735.225,0,-1028.17	0/0:140:138,2:138:4883:2:72:0,-35.3346,-432.769	0/0:119:119,0:119:4210:0:0:0,-35.8226,-378.494	0/1:195:90,105:90:3190:105:3717:-274.707,0,-228.573	0/1:101:58,43:58:2056:43:1536:-107.814,0,-154.898	0/1:77:24,53:24:852:53:1858:-143.605,0,-53.8047	0/0:43:41,2:41:1455:2:72:0,-6.11616,-124.417	0/0:826:824,2:824:29162:2:72:0,-241.831,-2615.95	0/0:69:68,1:68:2389:1:36:0,-17.1779,-211.664	0/0:107:106,1:106:3741:1:36:0,-28.621,-333.073	0/0:277:277,0:277:9834:0:0:0,-83.3853,-884.946	0/0:98:97,1:97:3429:1:36:0,-25.9027,-305.209	0/1:132:61,71:61:2155:71:2539:-188.632,0,-154.393	0/1:88:49,38:49:1710:38:1333:-93.2656,0,-127.536	0/1:158:79,79:79:2807:79:2797:-203.822,0,-205.216	0/1:48:24,24:24:855:24:839:-60.8786,0,-62.8044	0/0:130:130,0:130:4606:0:0:0,-39.1339,-414.655	0/0:127:127,0:127:4478:0:0:0,-38.2308,-403.091	0/1:637:320,316:320:11367:316:11181:-811.834,0,-830.761	0/1:1052:610,442:610:21499:442:15638:-1086.03,0,-1617.41	0/1:102:38,64:38:1347:64:2288:-175.145,0,-90.8127	0/0:70:70,0:70:2486:0:0:0,-21.0721,-223.902	0/0:183:183,0:183:6497:0:0:0,-55.0885,-584.499
chr07	24976178	.	C	T	0.00327848	PASS	AB=0.184871;ABP=2751.13;AC=31;AF=0.164894;AN=188;AO=758;CIGAR=1X;DP=11472;DPB=11472;DPRA=0.818906;EPP=1648.99;EPPR=23138;GTI=26;LEN=1;MEANALT=1.02083;MQM=26.5818;MQMR=26.6325;NS=94;NUMALT=1;ODDS=7.18855;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=27023;QR=380363;RO=10706;RPL=0;RPP=1648.99;RPPR=23146.7;RPR=758;RUN=1;SAF=758;SAP=1648.99;SAR=0;SRF=10705;SRP=23242.1;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:52:47,5:47:1668:5:180:0,-3.47,-100.267	0/1:66:42,24:42:1500:24:860:-37.2967,0,-82.5828	0/0:57:50,7:50:1776:7:252:0,-0.372046,-105.617	0/0:233:233,0:233:8241:0:0:0,-70.14,-533.399	0/0:50:50,0:50:1780:0:0:0,-15.0515,-117.503	0/0:115:115,0:115:4070:0:0:0,-34.6184,-269.252	0/1:119:97,22:97:3461:22:788:-15.134,0,-192.345	0/0:159:159,0:159:5652:0:0:0,-47.8638,-375.885	0/0:142:142,0:142:5027:0:0:0,-42.7463,-330.865	0/1:114:95,19:95:3362:19:668:-9.24093,0,-185.007	0/0:90:90,0:90:3187:0:0:0,-27.0927,-205.701	0/0:151:143,8:143:5084:8:284:0,-26.5156,-327.843	0/0:138:122,16:122:4347:16:568:0,-2.67988,-257.586	0/0:114:104,10:104:3698:10:351:0,-10.49,-226.305	0/1:167:144,23:144:5145:23:817:-2.81874,0,-287.666	0/0:94:94,0:94:3342:0:0:0,-28.2968,-220.391	0/0:123:123,0:123:4392:0:0:0,-37.0267,-290.111	0/0:115:115,0:115:4103:0:0:0,-34.6184,-270.688	0/0:79:79,0:79:2823:0:0:0,-23.7814,-185.753	0/1:117:92,25:92:3288:25:900:-23.4069,0,-181.283	0/0:169:167,0:167:5946:0:0:0,-50.272,-393.072	0/0:128:127,0:127:4516:0:0:0,-38.2308,-299.785	0/0:110:110,0:110:3927:0:0:0,-33.1133,-251.808	0/0:159:159,0:159:5621:0:0:0,-47.8638,-375.64	0/0:59:56,3:56:1995:3:108:0,-10.3447,-127.614	0/0:348:309,39:309:10923:39:1377:0,-12.1984,-649.955	0/0:248:248,0:248:8835:0:0:0,-74.6554,-584.611	0/0:41:36,5:36:1284:5:180:0,-0.325829,-74.0116	0/0:387:386,0:386:13740:0:0:0,-116.198,-911.939	0/0:49:44,5:44:1568:5:180:0,-2.56691,-93.673	0/0:283:283,0:283:10003:0:0:0,-85.1915,-644.258	0/0:21:21,0:21:756:0:0:0,-6.32163,-48.6665	0/0:39:39,0:39:1392:0:0:0,-11.7402,-92.8834	0/0:24:23,1:23:811:1:36:0,-4.57612,-52.4861	0/1:54:39,15:39:1396:15:540:-19.6023,0,-77.5019	0/1:14:11,3:11:396:3:108:-3.20166,0,-22.6131	0/0:378:378,0:378:13505:0:0:0,-113.789,-889.911	0/1:191:150,41:150:5363:41:1457:-39.6941,0,-300.767	0/1:106:88,18:88:3135:18:644:-11.1996,0,-180.31	0/1:16:12,4:12:424:4:140:-4.9207,0,-23.6429	0/0:94:92,2:92:3279:2:68:0,-23.3288,-210.828	0/0:50:50,0:50:1784:0:0:0,-15.0515,-116.96	0/0:115:101,14:101:3590:14:504:0,-2.29678,-207.815	0/1:105:90,15:90:3203:15:536:-3.13966,0,-178.977	0/1:119:100,19:100:3538:19:675:-7.776,0,-194.211	0/0:112:112,0:112:3929:0:0:0,-33.7154,-263.053	0/0:35:35,0:35:1252:0:0:0,-10.536,-83.2488	0/1:179:153,26:153:5439:26:924:-6.2564,0,-303.782	0/0:161:161,0:161:5664:0:0:0,-48.4658,-364.92	0/0:221:221,0:221:7794:0:0:0,-66.5276,-501.435	0/0:181:181,0:181:6399:0:0:0,-54.4864,-426.003	0/0:4:4,0:4:140:0:0:0,-1.20412,-9.66292	0/1:56:40,16:40:1428:16:553:-20.7414,0,-75.772	0/1:42:34,8:34:1224:8:276:-6.43497,0,-69.7566	0/0:21:21,0:21:748:0:0:0,-6.32163,-49.2292	0/1:92:74,18:74:2644:18:639:-15.2518,0,-148.612	0/1:24:16,8:16:572:8:288:-11.4538,0,-30.2183	0/0:20:20,0:20:688:0:0:0,-6.0206,-46.9065	0/0:38:38,0:38:1351:0:0:0,-11.4391,-88.6863	0/0:115:115,0:115:4087:0:0:0,-34.6184,-272.044	0/0:217:217,0:217:7720:0:0:0,-65.3235,-495.938	0/1:14:12,2:12:432:2:72:-0.559912,0,-24.1592	0/0:249:249,0:249:8874:0:0:0,-74.9565,-585.913	0/0:181:179,2:179:6351:2:72:0,-49.6249,-404.609	0/0:52:49,3:49:1744:3:108:0,-8.23748,-109.305	0/0:67:66,0:66:2352:0:0:0,-19.868,-149.413	0/1:158:129,29:129:4574:29:1036:-19.6588,0,-253.822	0/1:53:41,12:41:1454:12:432:-12.017,0,-81.6909	0/1:24:21,3:21:747:3:108:-0.19136,0,-43.2695	0/0:53:53,0:53:1863:0:0:0,-15.9546,-124.939	0/1:233:186,47:186:6652:47:1692:-43.4103,0,-378.203	0/1:13:9,4:9:320:4:144:-5.55382,0,-17.0172	0/0:207:207,0:207:7359:0:0:0,-62.3132,-490.548	0/0:69:69,0:69:2455:0:0:0,-20.7711,-163.55	0/1:211:181,28:181:6404:28:1000:-3.3093,0,-364.85	0/1:144:115,29:115:4039:29:1028:-23.4864,0,-224.282	0/1:84:69,15:69:2455:15:532:-10.6116,0,-144.225	0/0:97:97,0:97:3460:0:0:0,-29.1999,-230.274	0/0:19:19,0:19:676:0:0:0,-5.71957,-45.4187	0/0:111:111,0:111:3940:0:0:0,-33.4143,-261.958	0/0:134:134,0:134:4720:0:0:0,-40.338,-313.564	0/0:300:299,0:299:10554:0:0:0,-90.008,-682.193	0/0:213:212,1:212:7559:1:36:0,-61.6525,-481.768	0/0:125:110,15:110:3920:15:532:0,-3.01478,-223.009	0/1:226:193,33:193:6846:33:1168:-7.88006,0,-382.197	0/0:287:254,33:254:9014:33:1179:0,-10.4233,-516.365	0/1:92:78,14:78:2787:14:499:-5.89645,0,-162.495	0/0:140:140,0:140:5004:0:0:0,-42.1442,-328.404	0/0:127:127,0:127:4520:0:0:0,-38.2308,-298.227	0/1:67:54,13:54:1928:13:468:-11.0845,0,-110.682	0/1:147:117,30:117:4158:30:1080:-27.1939,0,-237.444	0/1:139:113,26:113:4006:26:936:-18.2003,0,-223.899	0/0:93:93,0:93:3301:0:0:0,-27.9958,-212.331	0/0:223:223,0:223:7940:0:0:0,-67.1297,-506.141
chr07	24976214	.	G	A	114234	PASS	AB=0.541996;ABP=76.6941;AC=141;AF=0.75;AN=188;AO=9072;CIGAR=1X;DP=11291;DPB=11291;DPRA=0;EPP=19702.6;EPPR=4808.48;GTI=6;LEN=1;MEANALT=1.06383;MQM=26.4422;MQMR=27.6435;NS=94;NUMALT=1;ODDS=0.719976;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=323877;QR=78721;RO=2213;RPL=9072;RPP=19702.6;RPPR=4808.48;RPR=0;RUN=1;SAF=9072;SAP=19702.6;SAR=0;SRF=2213;SRP=4808.48;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:11,40:11:396:40:1432:-79.5669,0,-12.2311	0/1:66:41,25:41:1472:25:896:-39.9278,0,-80.0746	0/1:56:38,18:38:1356:18:644:-26.0041,0,-76.7656	1/1:227:1,226:1:36:226:8070:-516.116,-65.5976,0	1/1:50:0,50:0:0:50:1788:-117.625,-15.0515,0	1/1:117:0,117:0:0:117:4177:-274.529,-35.2205,0	0/1:113:55,57:55:1953:57:2032:-97.5032,0,-97.7991	1/1:157:0,157:0:0:157:5603:-372.007,-47.2617,0	1/1:143:2,141:2:72:141:5029:-323.382,-37.6872,0	0/1:107:45,62:45:1612:62:2224:-110.622,0,-75.5474	1/1:90:0,90:0:0:90:3212:-204.955,-27.0927,0	0/1:149:57,92:57:2002:92:3300:-174.208,0,-97.1085	0/1:138:71,67:71:2531:67:2404:-116.817,0,-135.764	0/1:113:54,59:54:1936:59:2088:-105.517,0,-98.2872	0/1:163:80,83:80:2854:83:2972:-142.685,0,-143.004	1/1:90:0,90:0:0:90:3178:-211.832,-27.0927,0	1/1:121:0,121:0:0:121:4299:-284.898,-36.4246,0	1/1:113:0,113:0:0:113:4000:-265.873,-34.0164,0	1/1:78:0,78:0:0:78:2796:-183.594,-23.4803,0	0/1:120:56,64:56:2004:64:2296:-111.653,0,-98.0633	1/1:164:0,164:0:0:164:5836:-386.238,-49.3689,0	1/1:127:0,127:0:0:127:4544:-300.355,-38.2308,0	1/1:108:0,108:0:0:108:3864:-247.394,-32.5112,0	1/1:157:0,157:0:0:157:5629:-372.602,-47.2617,0	0/1:61:30,31:30:1056:31:1112:-55.4086,0,-55.0498	0/1:341:159,182:159:5639:182:6491:-324.186,0,-291.252	1/1:243:0,243:0:0:243:8658:-575.403,-73.1503,0	0/1:41:13,28:13:460:28:995:-54.1356,0,-19.1549	1/1:382:0,382:0:0:382:13609:-905.022,-114.993,0	0/1:48:21,27:21:743:27:960:-49.8286,0,-36.8062	1/1:273:1,272:1:36:272:9727:-619.811,-79.445,0	1/1:21:0,21:0:0:21:752:-48.6053,-6.32163,0	1/1:38:0,38:0:0:38:1337:-89.8561,-11.4391,0	0/1:23:7,16:7:252:16:572:-30.8349,0,-10.9735	0/1:52:28,24:28:996:24:864:-41.8211,0,-52.8267	0/1:12:8,4:8:288:4:140:-5.51499,0,-16.6668	1/1:383:0,383:0:0:383:13687:-904.621,-115.294,0	0/1:184:96,88:96:3452:88:3149:-154.588,0,-175.69	0/1:104:47,57:47:1671:57:2035:-103.062,0,-84.4998	0/1:15:9,6:9:320:6:212:-9.73762,0,-17.5278	0/1:92:31,61:31:1108:61:2160:-116.204,0,-48.6234	1/1:47:0,47:0:0:47:1676:-109.932,-14.1484,0	0/1:112:40,72:40:1436:72:2567:-136.122,0,-62.6489	0/1:105:42,63:42:1488:63:2247:-112.746,0,-68.9091	0/1:114:42,72:42:1463:72:2566:-129.216,0,-65.6149	1/1:108:0,108:0:0:108:3830:-254.27,-32.5112,0	1/1:33:0,33:0:0:33:1184:-78.6236,-9.93399,0	0/1:176:79,97:79:2820:97:3442:-169.194,0,-136.863	1/1:161:0,160:0:0:160:5704:-364.742,-48.1648,0	1/1:216:0,216:0:0:216:7705:-491.308,-65.0225,0	1/1:177:0,177:0:0:177:6329:-418.859,-53.2823,0	0/1:4:1,3:1:36:3:108:-6.04416,0,-1.53208	0/1:55:23,32:23:828:32:1144:-57.1916,0,-39.3764	0/1:43:12,31:12:428:31:1116:-61.9931,0,-15.9306	1/1:20:0,20:0:0:20:709:-47.1496,-6.0206,0	0/1:93:40,53:40:1397:53:1887:-96.9393,0,-67.9639	0/1:22:10,12:10:360:12:428:-21.2165,0,-16.9846	1/1:20:0,20:0:0:20:708:-47.6039,-6.0206,0	1/1:35:0,35:0:0:35:1260:-81.9629,-10.5361,0	1/1:113:0,112:0:0:112:3996:-265.354,-33.7154,0	1/1:217:1,216:1:36:216:7735:-492.004,-62.5873,0	0/1:14:5,9:5:165:9:324:-16.767,0,-7.30359	1/1:248:0,248:0:0:248:8868:-585.763,-74.6554,0	1/1:184:3,181:3:108:181:6465:-406.822,-48.0595,0	0/1:53:12,41:12:432:41:1453:-80.7441,0,-13.4722	1/1:65:0,64:0:0:64:2279:-145.171,-19.2659,0	0/1:152:60,92:60:2127:92:3281:-165.745,0,-97.3281	0/1:53:39,14:39:1372:14:480:-15.8194,0,-77.0074	0/1:24:9,15:9:315:15:540:-28.7962,0,-14.6658	1/1:50:0,50:0:0:50:1777:-118.194,-15.0515,0	0/1:233:119,114:119:4237:114:4093:-197.716,0,-223.181	0/1:13:4,9:4:144:9:324:-17.068,0,-5.55382	1/1:203:0,203:0:0:203:7259:-482.196,-61.1091,0	1/1:68:0,68:0:0:68:2428:-161.391,-20.47,0	0/1:205:80,125:80:2829:125:4454:-232.083,0,-131.388	0/1:143:63,80:63:2264:80:2862:-140.404,0,-107.569	0/1:81:51,30:51:1832:30:1076:-47.0888,0,-102.967	1/1:96:0,96:0:0:96:3436:-227.879,-28.8989,0	1/1:18:0,18:0:0:18:648:-43.1701,-5.41854,0	1/1:106:0,106:0:0:106:3793:-250.503,-31.9092,0	1/1:132:0,131:0:0:131:4640:-306.703,-39.4349,0	1/1:296:2,294:2:72:294:10484:-667.199,-83.8255,0	1/1:209:0,209:0:0:209:7477:-478.906,-62.9153,0	0/1:125:51,74:51:1802:74:2647:-132.265,0,-84.4694	0/1:221:101,119:101:3599:119:4241:-204.243,0,-176.108	0/1:287:130,157:130:4600:157:5620:-272.162,0,-224.064	0/1:91:41,50:41:1463:50:1796:-91.916,0,-74.5689	1/1:138:0,138:0:0:138:4946:-323.899,-41.5421,0	1/1:126:0,126:0:0:126:4515:-297.626,-37.9298,0	0/1:66:40,26:40:1423:26:919:-42.0265,0,-77.5515	0/1:142:76,66:76:2702:66:2372:-114.832,0,-141.496	0/1:134:74,60:74:2626:60:2144:-96.7568,0,-137.085	1/1:92:2,90:2:72:90:3223:-201.053,-22.7518,0	1/1:221:0,221:0:0:221:7899:-504.102,-66.5276,0
chr07	24995588	.	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chr07	25152101	.	A	G	49808.6	PASS	AB=0.515039;ABP=14.1135;AC=46;AF=0.244681;AN=188;AO=2938;CIGAR=1X;DP=12059;DPB=12059;DPRA=1.128;EPP=6382.8;EPPR=19793.8;GTI=1;LEN=1;MEANALT=1.11111;MQM=59.8233;MQMR=59.9806;NS=94;NUMALT=1;ODDS=12.7311;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104824;QR=326795;RO=9114;RPL=0;RPP=6382.8;RPPR=19793.8;RPR=2938;RUN=1;SAF=2938;SAP=6382.8;SAR=0;SRF=9114;SRP=19793.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:23,24:23:820:24:864:-63.9342,0,-59.9741	0/1:230:104,125:104:3717:125:4454:-331.881,0,-265.583	0/1:169:83,86:83:2984:86:3084:-226.91,0,-217.917	0/0:273:273,0:273:9788:0:0:0,-82.1812,-880.864	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.716	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.638	0/1:173:98,75:98:3512:75:2653:-186.91,0,-264.212	0/0:141:141,0:141:5030:0:0:0,-42.4452,-452.842	0/0:62:62,0:62:2224:0:0:0,-18.6639,-199.996	0/1:130:67,63:67:2404:63:2249:-163.538,0,-177.483	0/0:124:124,0:124:4456:0:0:0,-37.3277,-401.209	0/1:84:43,41:43:1548:41:1453:-105.777,0,-114.327	0/1:76:39,37:39:1385:37:1316:-95.8613,0,-102.069	0/1:143:72,71:72:2584:71:2544:-186.162,0,-189.762	0/1:63:25,38:25:896:38:1368:-104.456,0,-61.9955	0/0:72:72,0:72:2569:0:0:0,-21.6742,-231.458	0/0:109:109,0:109:3901:0:0:0,-32.8123,-351.282	0/0:74:74,0:74:2641:0:0:0,-22.2762,-237.935	0/0:79:79,0:79:2840:0:0:0,-23.7814,-255.838	0/1:287:146,141:146:5248:141:5049:-367.759,0,-386.059	0/0:113:113,0:113:4030:0:0:0,-34.0164,-362.886	0/0:152:152,0:152:5464:0:0:0,-45.7566,-491.885	0/0:162:162,0:162:5797:0:0:0,-48.7669,-521.842	0/0:142:142,0:142:5089:0:0:0,-42.7463,-458.151	0/1:95:56,39:56:2012:39:1404:-98.0552,0,-152.755	0/1:362:174,188:174:6244:188:6706:-494.642,0,-453.071	0/0:155:155,0:155:5568:0:0:0,-46.6596,-501.241	0/1:34:21,13:21:744:13:468:-32.2246,0,-57.0493	0/0:330:329,1:329:11784:1:21:0,-97.2399,-1058.32	0/1:368:209,159:209:7470:159:5673:-399.541,0,-561.562	0/0:283:278,4:278:9969:4:144:0,-71.9367,-883.808	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:40:40,0:40:1440:0:0:0,-12.0412,-129.898	1/1:12:1,11:1:36:11:396:-32.3738,-0.0140851,0	0/1:29:11,18:11:388:18:636:-48.8382,0,-26.5275	0/1:30:11,19:11:396:19:680:-52.4983,0,-26.9518	0/0:189:189,0:189:6760:0:0:0,-56.8947,-608.474	0/0:285:285,0:285:10225:0:0:0,-85.7935,-920.172	0/1:115:51,64:51:1836:64:2296:-172.196,0,-130.902	0/1:10:1,9:1:36:9:324:-26.4502,0,-0.587975	0/1:174:73,101:73:2624:101:3590:-270.917,0,-184.028	0/0:58:58,0:58:2084:0:0:0,-17.4597,-187.83	0/1:158:78,79:78:2796:79:2810:-205.429,0,-204.258	0/1:76:46,30:46:1656:30:1080:-74.635,0,-126.45	0/1:51:25,26:25:900:26:932:-68.8463,0,-65.9685	0/0:104:104,0:104:3728:0:0:0,-31.3071,-335.721	0/0:121:121,0:121:4344:0:0:0,-36.4246,-391.134	0/1:213:75,137:75:2700:137:4863:-373.638,0,-179.065	0/0:138:138,0:138:4956:0:0:0,-41.5421,-446.188	0/0:203:203,0:203:7276:0:0:0,-61.1091,-654.264	0/0:202:202,0:202:7229:0:0:0,-60.8081,-650.662	0/1:28:7,21:7:252:21:756:-59.935,0,-14.6001	0/1:241:142,99:142:5100:99:3548:-246.977,0,-386.588	0/1:136:69,67:69:2476:67:2363:-171.984,0,-182.153	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/1:189:88,101:88:3164:101:3582:-265.125,0,-228.089	0/1:56:26,30:26:932:30:1076:-80.2952,0,-67.3412	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/0:124:124,0:124:4429:0:0:0,-37.3277,-398.781	0/0:207:207,0:207:7440:0:0:0,-62.3132,-669.641	0/1:29:5,24:5:180:24:830:-66.2791,0,-7.82219	0/0:183:183,0:183:6565:0:0:0,-55.0885,-590.928	0/0:243:239,3:239:8564:3:108:0,-63.1339,-760.663	0/1:112:40,72:40:1436:72:2565:-197.383,0,-95.8086	0/0:109:109,0:109:3901:0:0:0,-32.8123,-351.152	0/0:187:185,1:185:6625:1:32:0,-53.1321,-593.108	0/1:212:74,138:74:2656:138:4940:-380.866,0,-175.467	0/1:52:27,25:27:972:25:900:-65.6675,0,-72.1443	0/0:111:109,2:109:3908:2:72:0,-26.5776,-345.076	0/1:100:44,56:44:1580:56:2008:-150.655,0,-112.389	0/1:27:10,17:10:360:17:612:-47.2856,0,-24.6165	0/0:128:128,0:128:4593:0:0:0,-38.5318,-413.15	0/0:77:76,0:76:2736:0:0:0,-22.8783,-246.122	0/1:225:123,102:123:4424:102:3607:-257.067,0,-330.598	0/1:215:88,127:88:3164:127:4564:-346.2,0,-220.262	0/1:164:84,80:84:3012:80:2853:-207.633,0,-221.942	0/0:94:92,2:92:3308:2:72:0,-21.4601,-291.101	0/0:24:24,0:24:830:0:0:0,-7.22472,-75.0124	0/0:107:107,0:107:3810:0:0:0,-32.2102,-343.096	0/0:128:127,1:127:4537:1:36:0,-34.9336,-404.898	0/0:281:281,0:281:10096:0:0:0,-84.5894,-908.565	0/0:111:111,0:111:3988:0:0:0,-33.4143,-359.109	0/1:94:51,43:51:1836:43:1548:-111.316,0,-137.224	0/1:96:59,37:59:2120:37:1328:-90.9234,0,-162.17	0/1:128:63,65:63:2268:65:2328:-171.248,0,-165.85	0/1:45:19,26:19:684:26:936:-71.0131,0,-48.344	0/0:85:84,1:84:3020:1:36:0,-21.9893,-268.432	0/0:94:94,0:94:3376:0:0:0,-28.2968,-304.055	0/1:129:63,66:63:2249:66:2360:-173.77,0,-163.839	0/1:195:107,88:107:3840:88:3148:-224.789,0,-287.095	0/1:62:18,44:18:648:44:1523:-118.692,0,-39.988	0/0:154:153,1:153:5488:1:36:0,-42.7603,-490.447	0/0:110:110,0:110:3952:0:0:0,-33.1133,-355.87
chr07	25152113	.	ATTTTGGC	ATTTTTGGC	46294.8	PASS	AB=0.504049;ABP=3.8016;AC=45;AF=0.239362;AN=188;AO=2814;CIGAR=1M1I7M;DP=11965;DPB=12317.8;DPRA=1.04899;EPP=6113.53;EPPR=19615.9;GTI=0;LEN=1;MEANALT=1.65385;MQM=59.8721;MQMR=59.9903;NS=94;NUMALT=1;ODDS=15.1238;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99200;QR=317146;RO=9076;RPL=0;RPP=6113.53;RPPR=19615.9;RPR=2814;RUN=1;SAF=2814;SAP=6113.53;SAR=0;SRF=9076;SRP=19711.3;SRR=0;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:23,24:23:768:24:860:-63.5734,0,-55.2808	0/1:224:105,119:105:3684:119:4186:-309.488,0,-264.339	0/1:166:83,83:83:2887:83:2930:-213.96,0,-210.1	0/0:270:268,0:268:9399:0:0:0,-80.676,-845.541	0/0:80:79,0:79:2751:0:0:0,-23.7814,-247.477	0/0:53:53,0:53:1854:0:0:0,-15.9546,-167.139	0/1:171:99,72:99:3471:72:2560:-179.147,0,-261.131	0/0:139:139,0:139:4868:0:0:0,-41.8432,-438.286	0/0:61:60,0:60:2106:0:0:0,-18.0618,-189.598	0/1:126:66,58:66:2314:58:2041:-146.273,0,-170.835	0/0:124:121,0:121:4206:0:0:0,-36.4246,-378.371	0/1:85:42,42:42:1458:42:1497:-109.376,0,-105.866	0/1:75:39,35:39:1367:35:1248:-90.0935,0,-100.8	0/1:143:72,71:72:2539:71:2524:-184.364,0,-185.715	0/1:61:25,36:25:881:36:1288:-97.8608,0,-61.245	0/0:72:72,0:72:2544:0:0:0,-21.6742,-229.212	0/0:108:107,0:107:3757:0:0:0,-32.2102,-338.134	0/0:74:74,0:74:2600:0:0:0,-22.2762,-234.252	0/0:79:78,0:78:2700:0:0:0,-23.4803,-242.889	0/1:284:146,137:146:5112:137:4825:-348.855,0,-374.684	0/0:113:112,0:112:3927:0:0:0,-33.7154,-353.312	0/0:153:152,0:152:5294:0:0:0,-45.7566,-476.401	0/0:163:162,0:162:5646:0:0:0,-48.7669,-507.918	0/0:143:142,0:142:4898:0:0:0,-42.7463,-440.63	0/1:95:55,39:55:1922:39:1373:-95.2039,0,-144.601	0/1:360:175,183:175:6104:183:6410:-468.887,0,-441.369	0/0:158:158,0:158:5515:0:0:0,-47.5627,-496.492	0/1:34:21,13:21:744:13:460:-31.5004,0,-57.0495	0/0:331:329,0:329:11528:0:0:0,-99.0389,-1037.15	0/1:357:205,148:205:7139:148:5185:-360.134,0,-535.971	0/0:283:275,3:275:9673:3:104:0,-74.3126,-860.87	0/0:15:15,0:15:516:0:0:0,-4.51545,-46.7656	0/0:41:41,0:41:1433:0:0:0,-12.3422,-129.266	0/1:11:1,10:1:36:10:356:-29.0699,0,-0.286945	0/1:27:11,16:11:371:16:559:-42.5098,0,-25.5868	0/1:29:10,19:10:348:19:667:-51.6248,0,-22.9256	0/0:190:189,0:189:6645:0:0:0,-56.8947,-597.785	0/0:287:287,0:287:9972:0:0:0,-86.3956,-897.462	0/1:110:49,58:49:1727:58:2045:-151.719,0,-123.146	0/1:10:1,9:1:36:9:316:-25.7232,0,-0.587975	0/1:172:74,98:74:2602:98:3444:-258.391,0,-182.654	0/0:58:56,0:56:1951:0:0:0,-16.8577,-175.507	0/1:154:78,75:78:2724:75:2657:-192.922,0,-198.988	0/1:77:46,31:46:1594:31:1108:-76.8517,0,-120.569	0/1:48:24,24:24:846:24:841:-61.5569,0,-62.0091	0/0:103:102,0:102:3582:0:0:0,-30.7051,-322.382	0/0:121:116,0:116:4056:0:0:0,-34.9195,-364.878	0/1:205:73,131:73:2514:131:4641:-356.082,0,-164.744	0/0:138:137,1:137:4798:1:36:0,-37.9439,-428.391	0/0:205:203,0:203:7123:0:0:0,-61.1091,-640.853	0/0:203:201,1:201:7029:1:36:0,-57.5696,-629.096	0/1:26:7,19:7:238:19:684:-54.0635,0,-13.9253	0/1:234:141,93:141:4947:93:3309:-227.586,0,-374.949	0/1:139:69,68:69:2422:68:2401:-174.746,0,-176.638	0/0:37:37,0:37:1283:0:0:0,-11.1381,-115.771	0/1:185:87,98:87:3025:98:3418:-252.02,0,-216.794	0/1:53:25,28:25:854:28:988:-73.2793,0,-61.2187	0/0:16:16,0:16:553:0:0:0,-4.81648,-50.0952	0/0:27:27,0:27:952:0:0:0,-8.12781,-85.9955	0/0:123:121,0:121:4214:0:0:0,-36.4246,-379.111	0/0:207:206,0:206:7234:0:0:0,-62.0122,-650.77	0/1:29:5,24:5:180:24:826:-65.9184,0,-7.82219	0/0:186:186,0:186:6511:0:0:0,-55.9916,-586.094	0/0:244:241,3:241:8403:3:104:0,-63.7485,-746.6	0/1:108:40,68:40:1388:68:2384:-182.303,0,-92.7033	0/0:107:106,0:106:3723:0:0:0,-31.9092,-334.917	0/0:186:183,0:183:6357:0:0:0,-55.0885,-571.883	0/1:205:74,129:74:2592:129:4497:-343.522,0,-172.156	0/1:51:27,24:27:954:24:841:-60.6538,0,-70.8235	0/0:111:108,2:108:3795:2:72:0,-26.5365,-334.969	0/1:97:45,52:45:1559:52:1833:-135.949,0,-111.388	0/1:28:11,17:11:372:17:578:-43.9067,0,-25.3769	0/0:128:128,0:128:4452:0:0:0,-38.5318,-400.807	0/0:79:78,0:78:2745:0:0:0,-23.4803,-246.935	0/1:219:123,93:123:4259:93:3278:-229.905,0,-318.18	0/1:217:91,125:91:3193:125:4442:-334.569,0,-222.217	0/1:161:83,77:83:2892:77:2675:-192.612,0,-212.144	0/0:96:94,2:94:3289:2:72:0,-22.0622,-289.397	0/0:24:24,0:24:817:0:0:0,-7.22472,-73.8426	0/0:109:109,0:109:3814:0:0:0,-32.8123,-343.464	0/0:128:126,1:126:4383:1:36:0,-34.9174,-391.131	0/0:284:284,0:284:9912:0:0:0,-85.4925,-892.054	0/0:112:109,0:109:3823:0:0:0,-32.8123,-343.915	0/1:93:51,42:51:1808:42:1500:-107.299,0,-135.006	0/1:95:57,37:57:2012:37:1305:-89.0929,0,-152.698	0/1:124:62,61:62:2155:61:2176:-158.72,0,-156.828	0/1:45:19,26:19:672:26:912:-68.8468,0,-47.2605	0/0:85:85,0:85:2991:0:0:0,-25.5875,-269.427	0/0:93:93,0:93:3229:0:0:0,-27.9958,-290.837	0/1:122:61,61:61:2151:61:2176:-159.37,0,-157.133	0/1:193:108,85:108:3771:85:2994:-211.582,0,-281.497	0/1:62:19,43:19:647:43:1502:-116.807,0,-39.8824	0/0:153:151,0:151:5223:0:0:0,-45.4555,-469.87	0/0:108:108,0:108:3793:0:0:0,-32.5112,-341.575
chr07	25276469	.	CGAC	CAA,CAAA	229976	PASS	AB=0.514587,0.482271;ABP=11.2459,15.1756;AC=146,42;AF=0.776596,0.223404;AN=188;AO=8599,2164;CIGAR=1M1D1M1X,1M1X1M1X;DP=10786;DPB=8634.25;DPRA=0,1.07262;EPP=18675.5,4702.08;EPPR=5.18177;GTI=1;LEN=3,4;MEANALT=1.75532,2.29412;MQM=59.14,59.6571;MQMR=60;NS=94;NUMALT=2;ODDS=0.92431;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=16,16;PQR=0;PRO=0;QA=303606,76123;QR=36;RO=1;RPL=0,0;RPP=18675.5,4702.08;RPPR=5.18177;RPR=8599,2164;RUN=1,1;SAF=0,0;SAP=18675.5,4702.08;SAR=8599,2164;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:60:0,31,29:0:0:31,29:1072,1029:-171.219,-84.1846,-74.8526,-87.385,0,-78.6551	1/2:143:0,97,46:0:0:97,46:3450,1633:-414.214,-133.389,-104.189,-281.18,0,-267.332	1/2:174:0,97,77:0:0:97,77:3330,2683:-487.591,-218.518,-189.318,-269.418,0,-246.239	1/1:144:0,144,0:0:0:144,0:5060,0:-455.492,-43.3483,0,-455.492,-43.3483,-455.492	1/1:83:0,83,0:0:0:83,0:2934,0:-264.285,-24.9855,0,-264.285,-24.9855,-264.285	1/1:84:0,84,0:0:0:84,0:2950,0:-264.925,-25.2865,0,-264.925,-25.2865,-264.925	1/2:229:0,116,113:0:0:116,113:4083,3950:-653.996,-321.666,-286.747,-332.68,0,-298.664	1/1:214:0,214,0:0:0:214,0:7585,0:-682.237,-64.4204,0,-682.237,-64.4204,-682.237	1/1:150:0,148,2:0:0:148,2:5231,72:-470.066,-44.5524,0,-464.191,-38.3178,-463.589	1/2:89:0,45,44:0:0:45,44:1581,1563:-256.362,-127.713,-114.166,-129.002,0,-115.757	1/1:31:0,31,0:0:0:31,0:1090,0:-98.3714,-9.33193,0,-98.3714,-9.33193,-98.3714	1/2:92:0,53,39:0:0:53,39:1859,1375:-262.963,-112.278,-96.3231,-151.036,0,-139.296	1/2:78:0,41,36:0:0:41,36:1452,1260:-220.705,-102.483,-90.1406,-118.214,0,-107.377	1/2:57:0,34,23:0:0:34,23:1174,802:-160.882,-65.5721,-55.3371,-95.6572,0,-88.7335	1/2:67:0,40,26:0:0:40,26:1418,924:-190.763,-75.2911,-63.2499,-115.468,0,-107.641	1/1:36:0,36,0:0:0:36,0:1278,0:-115.022,-10.8371,0,-115.022,-10.8371,-115.022	1/1:43:0,43,0:0:0:43,0:1517,0:-136.757,-12.9443,0,-136.757,-12.9443,-136.757	1/1:55:0,55,0:0:0:55,0:1936,0:-174.372,-16.5567,0,-174.372,-16.5567,-174.372	1/1:34:0,34,0:0:0:34,0:1213,0:-109.468,-10.235,0,-109.468,-10.235,-109.468	1/2:295:0,133,160:0:0:133,160:4734,5664:-847.065,-461.313,-421.276,-385.747,0,-337.582	1/1:229:0,228,0:0:0:228,0:8047,0:-723.816,-68.6348,0,-723.816,-68.6348,-723.816	1/1:154:0,154,0:0:0:154,0:5419,0:-487.542,-46.3586,0,-487.542,-46.3586,-487.542	1/1:146:0,146,0:0:0:146,0:5108,0:-459.671,-43.9504,0,-459.671,-43.9504,-459.671	1/1:148:0,146,2:0:0:146,2:5174,72:-464.489,-43.9504,0,-458.614,-37.7157,-458.012	1/2:107:0,53,54:0:0:53,54:1892,1907:-309.867,-155.647,-139.693,-154.575,0,-138.319	1/2:343:0,163,180:0:0:163,180:5703,6321:-978.56,-514.785,-465.717,-464.126,0,-409.94	1/1:227:0,227,0:0:0:227,0:8035,0:-722.915,-68.3338,0,-722.915,-68.3338,-722.915	1/2:29:0,19,10:0:0:19,10:680,360:-85.1477,-29.734,-24.0144,-55.7728,0,-52.7625	1/1:357:0,356,0:0:0:356,0:12548,0:-1128.72,-107.167,0,-1128.72,-107.167,-1128.72	1/2:202:0,110,90:0:0:110,90:3901,3148:-573.645,-256.128,-223.015,-317.563,0,-290.47	1/1:150:0,147,1:0:0:147,1:5180,36:-465.348,-44.2514,0,-462.411,-41.2702,-462.11	1/1:8:0,8,0:0:0:8,0:288,0:-26.265,-2.40824,0,-26.265,-2.40824,-26.265	1/1:11:0,11,0:0:0:11,0:372,0:-33.8044,-3.31133,0,-33.8044,-3.31133,-33.8044	1/2:5:0,3,2:0:0:3,2:108,72:-15.029,-6.23466,-5.33157,-9.15387,0,-8.55181	1/1:9:0,9,0:0:0:9,0:322,0:-29.3236,-2.70927,0,-29.3236,-2.70927,-29.3236	1/2:12:0,9,3:0:0:9,3:313,108:-34.6111,-9.17208,-6.46281,-25.7958,0,-24.8927	1/1:229:0,229,0:0:0:229,0:8101,0:-728.443,-68.9359,0,-728.443,-68.9359,-728.443	1/1:254:0,254,0:0:0:254,0:8924,0:-802.674,-76.4616,0,-802.674,-76.4616,-802.674	1/2:34:0,18,16:0:0:18,16:621,540:-94.5213,-44.0933,-38.6747,-50.7688,0,-45.9523	1/1:4:0,4,0:0:0:4,0:144,0:-13.3127,-1.20412,0,-13.3127,-1.20412,-13.3127	1/2:175:0,82,93:0:0:82,93:2902,3294:-504.909,-268.584,-243.9,-236.678,0,-208.683	1/1:24:0,24,0:0:0:24,0:835,0:-75.4593,-7.22472,0,-75.4593,-7.22472,-75.4593	1/2:215:0,100,115:0:0:100,115:3564,4016:-617.334,-326.938,-296.835,-290.749,0,-256.131	1/2:64:0,35,29:0:0:35,29:1251,1042:-187.34,-85.3578,-74.8217,-102.341,0,-93.6107	1/2:58:0,30,28:0:0:30,28:1069,1001:-169.026,-81.9769,-72.946,-87.4057,0,-78.9768	1/1:133:0,132,0:0:0:132,0:4644,0:-417.372,-39.736,0,-417.372,-39.736,-417.372	1/1:175:0,175,0:0:0:175,0:6218,0:-558.034,-52.6803,0,-558.034,-52.6803,-558.034	1/2:164:0,85,77:0:0:85,77:3030,2685:-464.891,-218.35,-192.762,-246.534,0,-223.355	1/1:142:0,142,0:0:0:142,0:4973,0:-447.643,-42.7463,0,-447.643,-42.7463,-447.643	1/1:190:0,189,1:0:0:189,1:6685,36:-601.221,-56.8947,0,-598.284,-53.5974,-597.983	1/1:240:0,240,0:0:0:240,0:8480,0:-763.095,-72.2472,0,-763.095,-72.2472,-763.095	1/2:7:0,4,3:0:0:4,3:142,99:-19.918,-8.33349,-7.12937,-11.9251,0,-11.022	1/2:188:0,93,94:0:0:93,94:3277,3334:-538.331,-271.683,-243.688,-266.74,0,-238.443	1/2:94:0,46,48:0:0:46,48:1610,1681:-267.931,-136.96,-123.113,-131.321,0,-116.871	1/1:18:0,18,0:0:0:18,0:637,0:-57.6563,-5.41854,0,-57.6563,-5.41854,-57.6563	1/2:166:0,88,78:0:0:88,78:3103,2734:-475.362,-222.785,-196.295,-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chr07	25643404	.	G	A	33899.5	PASS	AB=0.455914;ABP=80.3606;AC=47;AF=0.25;AN=188;AO=2106;CIGAR=1X;DP=9353;DPB=9353;DPRA=0.973738;EPP=4567.45;EPPR=15676.7;GTI=1;LEN=1;MEANALT=1.05172;MQM=59.9896;MQMR=59.9899;NS=94;NUMALT=1;ODDS=0.547367;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75172;QR=258882;RO=7242;RPL=2106;RPP=4576.13;RPPR=15694.1;RPR=0;RUN=1;SAF=1;SAP=4567.45;SAR=2105;SRF=2;SRP=15711.4;SRR=7240;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:101:55,46:55:1972:46:1656:-118.924,0,-147.351	0/1:88:44,44:44:1580:44:1584:-116.361,0,-116.001	0/1:154:104,50:104:3712:50:1768:-113.042,0,-287.924	0/0:190:190,0:190:6781:0:0:0,-57.1957,-610.363	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/0:51:51,0:51:1817:0:0:0,-15.3525,-163.809	0/1:65:32,33:32:1148:33:1184:-87.3014,0,-84.0629	0/0:133:132,1:132:4736:1:36:0,-36.4387,-422.798	0/1:128:94,34:94:3364:34:1190:-68.8692,0,-264.445	0/1:79:49,30:49:1752:30:1076:-73.3715,0,-134.024	0/0:54:54,0:54:1923:0:0:0,-16.2556,-173.346	0/1:134:66,68:66:2350:68:2435:-179.067,0,-171.42	0/1:113:60,53:60:2123:53:1900:-137.262,0,-157.322	0/1:67:31,36:31:1107:36:1280:-95.3342,0,-79.7711	0/1:96:45,51:45:1594:51:1828:-135.902,0,-114.85	0/0:91:90,1:90:3215:1:36:0,-23.7955,-285.974	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:42:41,1:41:1468:1:36:0,-9.04498,-128.818	0/0:57:56,1:56:2003:1:36:0,-13.5604,-176.945	0/1:203:140,63:140:4999:63:2252:-141.834,0,-388.949	0/1:262:147,115:147:5280:115:4105:-290.765,0,-396.464	0/0:124:121,2:121:4332:2:72:0,-30.5498,-383.219	0/1:162:85,77:85:3035:77:2718:-196.093,0,-224.613	0/0:112:112,0:112:3999:0:0:0,-33.7154,-360.1	0/1:67:24,43:24:856:43:1506:-115.661,0,-57.1921	0/1:216:120,96:120:4272:96:3426:-243.529,0,-319.638	0/0:235:235,0:235:8404:0:0:0,-70.742,-756.366	0/1:53:24,29:24:860:29:1036:-77.5993,0,-61.7672	0/0:213:213,0:213:7624:0:0:0,-64.1194,-686.197	0/0:83:83,0:83:2975:0:0:0,-24.9855,-267.982	0/0:134:133,1:133:4756:1:36:0,-36.7397,-424.6	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:4:2,2:2:72:2:68:-5.25359,0,-5.6326	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/1:16:11,5:11:396:5:180:-11.7356,0,-31.1663	0/0:274:274,0:274:9794:0:0:0,-82.4822,-881.407	0/0:77:77,0:77:2756:0:0:0,-23.1793,-248.282	0/1:76:45,31:45:1594:31:1112:-77.5131,0,-120.87	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:82:62,20:62:2220:20:720:-40.4443,0,-175.38	0/0:41:41,0:41:1455:0:0:0,-12.3422,-131.245	0/1:153:102,51:102:3639:51:1813:-117.392,0,-281.658	0/1:77:37,39:37:1328:39:1396:-102.701,0,-96.5842	0/1:91:42,49:42:1478:49:1764:-131.65,0,-105.919	0/0:91:91,0:91:3251:0:0:0,-27.3937,-292.811	0/0:95:94,1:94:3349:1:21:0,-26.4979,-299.526	0/1:127:74,53:74:2640:53:1885:-131.696,0,-199.616	0/0:107:107,0:107:3816:0:0:0,-32.2102,-343.266	0/0:76:73,3:73:2611:3:108:0,-12.8031,-225.162	0/0:169:169,0:169:6060:0:0:0,-50.8741,-545.502	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/1:129:74,55:74:2656:55:1976:-139.282,0,-200.453	0/1:71:32,39:32:1148:39:1400:-104.926,0,-82.2567	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:135:61,74:61:2180:74:2640:-197.208,0,-155.827	0/1:84:58,26:58:2072:26:936:-59.2729,0,-161.464	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/0:85:85,0:85:3027:0:0:0,-25.5875,-272.661	0/0:96:96,0:96:3426:0:0:0,-28.8989,-308.553	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/0:116:116,0:116:4168:0:0:0,-34.9195,-375.301	0/0:182:178,4:178:6364:4:144:0,-41.4738,-559.538	0/1:83:56,27:56:2000:27:968:-62.4519,0,-155.288	0/0:79:79,0:79:2828:0:0:0,-23.7814,-254.759	0/0:201:201,0:201:7188:0:0:0,-60.507,-646.977	0/1:195:93,101:93:3332:101:3608:-266.167,0,-241.338	0/1:46:19,27:19:675:27:968:-73.59,0,-47.2296	0/0:92:92,0:92:3288:0:0:0,-27.6948,-296.14	0/1:67:33,34:33:1162:34:1216:-89.5776,0,-84.7163	0/1:19:12,7:12:432:7:252:-17.3094,0,-33.5016	0/0:141:140,0:140:5000:0:0:0,-42.1442,-449.789	0/0:86:86,0:86:3072:0:0:0,-25.8886,-276.709	0/1:183:74,109:74:2644:109:3838:-290.527,0,-183.118	0/1:146:84,62:84:3004:62:2212:-155.392,0,-226.641	0/1:107:63,44:63:2255:44:1584:-110.641,0,-171.002	0/0:68:68,0:68:2424:0:0:0,-20.47,-218.416	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:88:87,1:87:3124:1:36:0,-22.8924,-277.787	0/0:88:88,0:88:3160:0:0:0,-26.4906,-284.624	0/0:223:222,0:222:7952:0:0:0,-66.8287,-715.343	0/0:61:61,0:61:2183:0:0:0,-18.3628,-196.735	0/1:85:43,42:43:1536:42:1508:-110.427,0,-112.946	0/1:115:65,50:65:2336:50:1792:-126.944,0,-175.881	0/1:193:105,88:105:3740:88:3156:-226.166,0,-278.701	0/1:46:18,28:18:648:28:1004:-76.8285,0,-44.8045	0/0:108:107,1:107:3814:1:36:0,-28.913,-339.859	0/0:100:100,0:100:3566:0:0:0,-30.103,-321.018	0/1:31:10,21:10:360:21:756:-58.8773,0,-23.4124	0/1:105:49,56:49:1756:56:1984:-147.224,0,-126.716	0/1:104:35,69:35:1238:69:2463:-190.617,0,-80.4157	0/0:107:107,0:107:3831:0:0:0,-32.2102,-344.986	0/0:179:179,0:179:6393:0:0:0,-53.8844,-575.459
chr07	25849210	.	AAGT	AAGAAA,AAGAGA	284162	PASS	AB=0.503733,0.490358;ABP=3.78838,8.20292;AC=142,46;AF=0.755319,0.244681;AN=188;AO=10331,3164;CIGAR=3M2I1X,1M2I2M1X;DP=13560;DPB=20336.2;DPRA=0,1.09465;EPP=22419.1,6873.55;EPPR=0;GTI=1;LEN=6,6;MEANALT=2.20213,2.84;MQM=59.5725,40.6429;MQMR=0;NS=94;NUMALT=2;ODDS=0.49469;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=365401,112199;QR=0;RO=0;RPL=10330,3164;RPP=22427.8,6873.55;RPPR=0;RPR=1,0;RUN=1,1;SAF=10330,3164;SAP=22427.8,6873.55;SAR=1,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:46:0,36,10:0:0:36,10:1259,360:-131.081,-28.664,-17.8269,-102.765,0,-99.7548	1/2:94:0,35,58:0:0:35,58:1245,2062:-262.559,-161.105,-150.569,-101.493,0,-84.0328	1/2:269:0,149,117:0:0:149,117:5270,4189:-758.09,-329.377,-284.523,-428.719,0,-393.498	1/1:351:0,351,0:0:0:351,0:12437,0:-1119.14,-105.662,0,-1119.14,-105.662,-1119.14	1/1:137:0,137,0:0:0:137,0:4849,0:-436.55,-41.2411,0,-436.55,-41.2411,-436.55	1/1:72:0,71,0:0:0:71,0:2541,0:-228.643,-21.3731,0,-228.643,-21.3731,-228.643	1/2:97:0,62,35:0:0:62,35:2159,1240:-272.8,-97.2364,-78.5726,-175.907,0,-165.371	1/1:230:0,227,0:0:0:227,0:8030,0:-722.234,-68.3338,0,-722.234,-68.3338,-722.234	1/2:212:0,104,106:0:0:104,106:3682,3739:-592.427,-292.556,-261.248,-299.95,0,-268.041	1/2:152:0,83,69:0:0:83,69:2963,2457:-436.476,-194.923,-169.937,-241.905,0,-221.134	1/1:57:0,57,0:0:0:57,0:2006,0:-180.809,-17.1587,0,-180.809,-17.1587,-180.809	1/2:124:0,57,65:0:0:57,65:2038,2272:-341.05,-174.894,-157.735,-166.22,0,-146.653	1/1:90:0,89,0:0:0:89,0:3161,0:-284.164,-26.7917,0,-284.164,-26.7917,-284.164	1/2:80:0,43,37:0:0:43,37:1510,1304:-225.087,-102.185,-89.241,-123.247,0,-112.109	1/2:98:0,46,50:0:0:46,50:1633,1782:-273.755,-140.699,-126.851,-133.048,0,-117.996	1/1:76:0,76,0:0:0:76,0:2694,0:-241.869,-22.8783,0,-241.869,-22.8783,-241.869	1/1:40:0,39,0:0:0:39,0:1380,0:-124.131,-11.7402,0,-124.131,-11.7402,-124.131	1/1:38:0,38,0:0:0:38,0:1339,0:-120.803,-11.4391,0,-120.803,-11.4391,-120.803	1/1:21:0,21,0:0:0:21,0:754,0:-68.161,-6.32163,0,-68.161,-6.32163,-68.161	1/2:356:0,199,152:0:0:199,152:7006,5408:-997.27,-427.391,-367.486,-569.901,0,-524.144	1/2:277:0,150,127:0:0:150,127:5317,4499:-784.09,-350.927,-305.773,-433.509,0,-395.278	1/1:239:0,239,0:0:0:239,0:8487,0:-763.108,-71.9462,0,-763.108,-71.9462,-763.108	1/2:246:0,130,115:0:0:130,115:4583,4086:-695.231,-322.09,-282.956,-373.138,0,-338.52	1/2:126:0,112,14:0:0:112,14:3957,502:-359.326,-37.646,-3.93062,-322.012,0,-317.798	1/2:188:0,105,81:0:0:105,81:3730,2860:-524.925,-220.974,-189.366,-304.033,0,-279.649	1/2:441:0,201,237:0:0:201,237:7084,8393:-1232.62,-655.931,-595.424,-576.76,0,-505.416	1/1:320:0,319,0:0:0:319,0:11319,0:-1018.14,-96.0286,0,-1018.14,-96.0286,-1018.14	1/2:51:0,26,25:0:0:26,25:918,895:-144.33,-69.5756,-61.7489,-75.1014,0,-67.5757	1/1:387:0,387,0:0:0:387,0:13636,0:-1226.77,-116.499,0,-1226.77,-116.499,-1226.77	1/1:167:0,166,1:0:0:166,1:5802,36:-521.904,-49.971,0,-518.966,-46.6737,-518.665	1/1:149:0,149,0:0:0:149,0:5233,0:-470.905,-44.8535,0,-470.905,-44.8535,-470.905	1/1:8:0,8,0:0:0:8,0:284,0:-25.8989,-2.40824,0,-25.8989,-2.40824,-25.8989	1/1:11:0,11,0:0:0:11,0:396,0:-35.9781,-3.31133,0,-35.9781,-3.31133,-35.9781	1/2:9:0,6,2:0:0:6,2:214,71:-23.0332,-5.58316,-3.77698,-17.443,0,-16.8409	1/1:4:0,4,0:0:0:4,0:142,0:-13.1292,-1.20412,0,-13.1292,-1.20412,-13.1292	1/2:8:0,3,5:0:0:3,5:108,170:-21.8444,-13.0156,-12.1125,-9.17208,0,-7.66693	1/1:226:0,226,0:0:0:226,0:7991,0:-718.918,-68.0328,0,-718.918,-68.0328,-718.918	1/1:223:0,223,0:0:0:223,0:7836,0:-704.936,-67.1297,0,-704.936,-67.1297,-704.936	1/2:42:0,17,25:0:0:17,25:610,893:-120.393,-70.6349,-65.5174,-50.112,0,-42.5862	1/2:11:0,8,3:0:0:8,3:286,103:-31.729,-8.3906,-5.98236,-23.6772,0,-22.7742	1/2:165:0,82,83:0:0:82,83:2887,2965:-464.01,-229.124,-204.44,-235.232,0,-210.246	1/1:30:0,29,0:0:0:29,0:1034,0:-93.0043,-8.72987,0,-93.0043,-8.72987,-93.0043	1/2:343:0,137,206:0:0:137,206:4848,7309:-958.782,-564.574,-523.333,-394.555,0,-332.543	1/2:76:0,40,36:0:0:40,36:1418,1285:-215.92,-100.392,-88.3505,-115.876,0,-105.039	1/2:48:0,22,26:0:0:22,26:766,928:-136.141,-73.8577,-67.2351,-62.6314,0,-54.8046	1/1:218:0,213,3:0:0:213,3:7555,108:-679.523,-64.1194,0,-670.711,-55.2832,-669.808	1/1:243:0,241,0:0:0:241,0:8499,0:-764.514,-72.5482,0,-764.514,-72.5482,-764.514	1/2:326:0,178,148:0:0:178,148:6266,5219:-921.06,-411.105,-357.522,-510.301,0,-465.749	1/1:144:0,144,0:0:0:144,0:5121,0:-460.94,-43.3483,0,-460.94,-43.3483,-460.94	1/1:178:0,178,0:0:0:178,0:6290,0:-566.107,-53.5833,0,-566.107,-53.5833,-566.107	1/1:112:0,112,0:0:0:112,0:3977,0:-358.092,-33.7154,0,-358.092,-33.7154,-358.092	1/2:11:0,3,8:0:0:3,8:92,288:-30.5232,-23.1615,-22.2584,-7.68026,0,-5.27202	1/2:159:0,80,77:0:0:80,77:2840,2739:-445.311,-213.955,-189.873,-231.378,0,-208.198	1/2:100:0,39,60:0:0:39,60:1385,2132:-279.904,-167.055,-155.314,-112.861,0,-94.7992	1/1:7:0,7,0:0:0:7,0:252,0:-23.0207,-2.10721,0,-23.0207,-2.10721,-23.0207	1/2:250:0,124,126:0:0:124,126:4365,4445:-701.887,-346.546,-309.219,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chr07	25849221	.	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chr07	26009776	.	A	G	119032	PASS	AB=0.432449;ABP=134.441;AC=144;AF=0.765957;AN=188;AO=5619;CIGAR=1X;DP=7524;DPB=7524;DPRA=0;EPP=12178.5;EPPR=4139.67;GTI=1;LEN=1;MEANALT=1;MQM=59.5499;MQMR=59.4;NS=94;NUMALT=1;ODDS=1.41484;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=200442;QR=68263;RO=1905;RPL=5616;RPP=12178.5;RPPR=4139.67;RPR=3;RUN=1;SAF=0;SAP=12204.5;SAR=5619;SRF=0;SRP=4139.67;SRR=1905;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:17,15:17:608:15:540:-39.3036,0,-45.4109	0/1:79:26,53:26:932:53:1904:-147.818,0,-59.964	0/1:167:98,69:98:3520:69:2459:-171.093,0,-266.592	1/1:126:0,126:0:0:126:4456:-401.19,-37.9298,0	1/1:39:0,39:0:0:39:1392:-125.444,-11.7402,0	1/1:29:0,29:0:0:29:1038:-93.7127,-8.72987,0	0/1:71:32,39:32:1152:39:1387:-103.74,0,-82.6077	1/1:98:0,98:0:0:98:3481:-313.439,-29.5009,0	0/1:81:37,44:37:1328:44:1558:-116.109,0,-95.3199	0/1:68:41,27:41:1472:27:968:-66.9658,0,-112.301	1/1:93:0,93:0:0:93:3312:-298.288,-27.9958,0	0/1:105:43,62:43:1531:62:2210:-167.512,0,-106.46	1/1:71:0,71:0:0:71:2548:-229.35,-21.3731,0	0/1:82:43,39:43:1548:39:1391:-100.797,0,-114.799	0/1:65:20,45:20:720:45:1612:-125.707,0,-45.5618	1/1:63:0,63:0:0:63:2247:-202.483,-18.9649,0	1/1:47:0,47:0:0:47:1688:-152.176,-14.1484,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	1/1:45:0,45:0:0:45:1596:-143.894,-13.5464,0	0/1:85:42,43:42:1508:43:1533:-112.674,0,-110.42	0/1:118:75,43:75:2683:43:1528:-102.287,0,-206.139	1/1:89:0,89:0:0:89:3174:-285.853,-26.7917,0	0/1:109:59,50:59:2116:50:1796:-129.108,0,-157.894	1/1:51:2,49:2:72:49:1760:-151.833,-8.51581,0	0/1:64:28,36:28:999:36:1284:-96.5815,0,-70.954	1/1:132:0,132:0:0:132:4711:-423.346,-39.736,0	1/1:205:0,205:0:0:205:7287:-655.801,-61.7112,0	0/1:42:19,23:19:684:23:810:-60.5678,0,-49.2343	1/1:200:0,200:0:0:200:7119:-640.73,-60.206,0	1/1:166:5,161:5:180:161:5771:-502.753,-33.4189,0	1/1:150:0,150:0:0:150:5354:-481.81,-45.1545,0	1/1:5:0,5:0:0:5:176:-16.1803,-1.50515,0	1/1:18:0,18:0:0:18:640:-57.9293,-5.41854,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:21:13,8:13:468:8:288:-19.9458,0,-36.1298	1/1:174:0,174:0:0:174:6204:-558.443,-52.3792,0	1/1:58:0,58:0:0:58:2071:-186.644,-17.4597,0	0/1:54:21,33:21:747:33:1184:-90.5882,0,-51.2905	0/1:13:4,9:4:140:9:324:-25.5925,0,-8.86871	0/1:143:75,68:75:2679:68:2419:-174.875,0,-197.503	1/1:37:0,37:0:0:37:1328:-119.822,-11.1381,0	0/1:153:90,63:90:3205:63:2251:-156.753,0,-242.577	0/1:36:17,19:17:608:19:673:-50.0329,0,-44.2126	0/1:33:13,20:13:468:20:712:-54.4727,0,-32.4389	1/1:70:0,70:0:0:70:2495:-224.6,-21.0721,0	1/1:132:0,132:0:0:132:4721:-424.989,-39.736,0	0/1:144:98,46:98:3499:46:1613:-101.919,0,-271.756	1/1:80:0,80:0:0:80:2852:-256.909,-24.0824,0	1/1:45:0,45:0:0:45:1604:-144.641,-13.5464,0	1/1:99:0,99:0:0:99:3532:-318.079,-29.802,0	0/0:13:12,1:12:432:1:36:0,-0.315115,-35.6202	1/1:73:1,72:1:36:72:2552:-226.077,-18.3769,0	0/1:80:46,34:46:1652:34:1215:-85.5606,0,-124.88	1/1:13:0,13:0:0:13:453:-41.0986,-3.91339,0	0/1:145:85,60:85:3048:60:2139:-149.103,0,-230.859	0/1:41:27,14:27:972:14:496:-32.6191,0,-75.4533	1/1:9:0,9:0:0:9:324:-29.504,-2.70927,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:80:0,80:0:0:80:2859:-257.547,-24.0824,0	1/1:143:0,143:0:0:143:5132:-461.322,-43.0473,0	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2891	1/1:119:0,119:0:0:119:4233:-381.141,-35.8226,0	1/1:71:2,69:2:72:69:2456:-214.433,-14.5364,0	0/1:50:26,24:26:936:24:864:-63.0307,0,-69.508	1/1:67:0,67:0:0:67:2404:-216.609,-20.169,0	1/1:129:1,128:1:36:128:4564:-407.299,-35.2346,0	0/1:225:173,52:173:6216:52:1868:-100.651,0,-491.518	0/1:58:32,26:32:1143:26:924:-66.0124,0,-85.6364	1/1:50:0,50:0:0:50:1772:-158.788,-15.0515,0	0/1:56:30,26:30:1076:26:928:-66.9806,0,-80.2952	0/1:24:6,18:6:216:18:644:-51.0617,0,-12.1894	1/1:144:0,144:0:0:144:5140:-462.708,-43.3483,0	1/1:92:0,92:0:0:92:3283:-295.644,-27.6948,0	0/1:117:66,51:66:2363:51:1820:-128.851,0,-177.065	0/1:135:101,34:101:3620:34:1196:-67.3033,0,-285.131	0/1:128:96,32:96:3443:32:1148:-65.098,0,-271.332	1/1:61:0,61:0:0:61:2179:-196.374,-18.3628,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:30:0,30:0:0:30:1080:-97.5086,-9.0309,0	1/1:82:0,82:0:0:82:2904:-261.381,-24.6845,0	1/1:258:0,258:0:0:258:9211:-828.534,-77.6657,0	1/1:48:0,48:0:0:48:1728:-155.803,-14.4494,0	0/1:57:32,25:32:1148:25:900:-64.1576,0,-86.3825	0/1:49:37,12:37:1328:12:419:-23.2921,0,-105.065	0/1:96:52,44:52:1868:44:1584:-113.952,0,-138.846	0/1:24:13,11:13:468:11:396:-28.758,0,-35.2267	1/1:87:0,87:0:0:87:3107:-279.555,-26.1896,0	1/1:67:0,67:0:0:67:2395:-215.722,-20.169,0	0/1:66:36,30:36:1288:30:1080:-77.6325,0,-96.3372	0/1:127:65,62:65:2319:62:2202:-160.078,0,-170.422	0/1:53:38,15:38:1356:15:517:-30.8999,0,-106.384	1/1:86:0,86:0:0:86:3051:-273.703,-25.8886,0	1/1:115:0,115:0:0:115:4114:-370.434,-34.6185,0
chr07	26009782	.	GTTA	GTTG,ATTG	163961	PASS	AB=0.428869,0.568452;ABP=150.673,139.761;AC=144,44;AF=0.765957,0.234043;AN=188;AO=5633,1932;CIGAR=3M1X,1X2M1X;DP=7581;DPB=7581;DPRA=0,1.00132;EPP=12217.5,4198.29;EPPR=0;GTI=1;LEN=1,4;MEANALT=1.67021,2.21277;MQM=59.5477,59.3452;MQMR=0;NS=94;NUMALT=2;ODDS=0.868019;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=201893,68316;QR=0;RO=0;RPL=5631,1932;RPP=12217.5,4198.29;RPPR=0;RPR=2,0;RUN=1,1;SAF=0,0;SAP=12234.9,4198.29;SAR=5633,1932;SRF=0;SRP=0;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:32:0,15,17:0:0:15,17:540,604:-93.6285,-49.5651,-45.0496,-44.4211,0,-39.3036	1/2:81:0,54,25:0:0:54,25:1944,856:-227.013,-69.5199,-53.2643,-157.543,0,-150.017	1/2:172:0,70,102:0:0:70,102:2508,3620:-498.589,-295.183,-274.111,-203.762,0,-173.057	1/1:126:0,126,0:0:0:126,0:4520,0:-406.862,-37.9298,0,-406.862,-37.9298,-406.862	1/1:39:0,39,0:0:0:39,0:1400,0:-126.164,-11.7402,0,-126.164,-11.7402,-126.164	1/1:30:0,30,0:0:0:30,0:1076,0:-97.0834,-9.0309,0,-97.0834,-9.0309,-97.0834	1/2:71:0,39,32:0:0:39,32:1400,1131:-206.569,-92.4555,-80.7154,-114.469,0,-104.837	1/1:97:0,97,0:0:0:97,0:3472,0:-312.572,-29.1999,0,-312.572,-29.1999,-312.572	1/2:82:0,44,38:0:0:44,38:1575,1355:-238.897,-110.578,-97.3328,-128.676,0,-117.236	1/2:70:0,27,43:0:0:27,43:972,1529:-204.159,-124.847,-116.719,-79.6701,0,-66.7258	1/1:95:0,95,0:0:0:95,0:3412,0:-307.279,-28.5979,0,-307.279,-28.5979,-307.279	1/2:105:0,62,43:0:0:62,43:2215,1518:-304.492,-123.953,-105.289,-180.893,0,-167.949	1/1:70:0,70,0:0:0:70,0:2498,0:-224.859,-21.0721,0,-224.859,-21.0721,-224.859	1/2:84:0,39,45:0:0:39,45:1400,1591:-243.984,-129.79,-118.05,-114.55,0,-101.003	1/2:66:0,46,20:0:0:46,20:1652,710:-192.747,-58.2053,-44.3579,-134.898,0,-128.878	1/1:64:0,64,0:0:0:64,0:2300,0:-207.241,-19.2659,0,-207.241,-19.2659,-207.241	1/1:46:0,46,0:0:0:46,0:1656,0:-149.298,-13.8474,0,-149.298,-13.8474,-149.298	1/1:28:0,28,0:0:0:28,0:1004,0:-90.6759,-8.42884,0,-90.6759,-8.42884,-90.6759	1/1:45:0,45,0:0:0:45,0:1616,0:-145.688,-13.5464,0,-145.688,-13.5464,-145.688	1/2:86:0,43,43:0:0:43,43:1532,1535:-250.358,-125.489,-112.544,-125.226,0,-112.282	1/2:120:0,44,76:0:0:44,76:1580,2712:-350.27,-221.392,-208.146,-129.237,0,-106.359	1/1:89:0,89,0:0:0:89,0:3169,0:-285.383,-26.7917,0,-285.383,-26.7917,-285.383	1/2:111:0,50,61:0:0:50,61:1800,2150:-322.219,-175.347,-160.295,-147.228,0,-128.866	1/1:51:0,49,2:0:0:49,2:1760,68:-158.329,-14.7505,0,-152.814,-8.89482,-152.212	1/2:65:0,36,29:0:0:36,29:1292,1033:-189.917,-84.5471,-73.71,-105.727,0,-96.9975	1/1:133:0,132,0:0:0:132,0:4732,0:-425.617,-39.736,0,-425.617,-39.736,-425.617	1/1:205:0,205,0:0:0:205,0:7360,0:-662.373,-61.7112,0,-662.373,-61.7112,-662.373	1/2:43:0,24,18:0:0:24,18:864,648:-123.344,-52.8607,-45.636,-70.4829,0,-65.0643	1/1:197:0,197,0:0:0:197,0:7063,0:-635.666,-59.3029,0,-635.666,-59.3029,-635.666	1/1:168:0,163,5:0:0:163,5:5837,173:-524.895,-49.0679,0,-510.837,-34.6637,-509.332	1/1:148:0,147,0:0:0:147,0:5272,0:-474.202,-44.2514,0,-474.202,-44.2514,-474.202	1/1:5:0,5,0:0:0:5,0:180,0:-16.5474,-1.50515,0,-16.5474,-1.50515,-16.5474	1/1:18:0,18,0:0:0:18,0:640,0:-57.9293,-5.41854,0,-57.9293,-5.41854,-57.9293	1/2:6:0,5,1:0:0:5,1:180,36:-17.9843,-3.29724,-1.79209,-15.0469,0,-14.7459	1/1:10:0,10,0:0:0:10,0:360,0:-32.7443,-3.0103,0,-32.7443,-3.0103,-32.7443	1/2:22:0,8,14:0:0:8,14:288,500:-64.609,-41.1086,-38.7004,-23.8592,0,-19.6447	1/1:175:0,175,0:0:0:175,0:6288,0:-565.995,-52.6803,0,-565.995,-52.6803,-565.995	1/1:57:0,57,0:0:0:57,0:2052,0:-184.933,-17.1587,0,-184.933,-17.1587,-184.933	1/2:54:0,33,21:0:0:33,21:1188,754:-158.768,-61.8571,-51.9231,-97.2701,0,-90.9485	1/2:13:0,9,4:0:0:9,4:324,135:-37.459,-11.0015,-8.29228,-26.7966,0,-25.5925	1/2:145:0,68,76:0:0:68,76:2431,2673:-415.071,-216.892,-196.422,-198.281,0,-175.403	1/1:36:0,36,0:0:0:36,0:1292,0:-116.584,-10.8371,0,-116.584,-10.8371,-116.584	1/2:154:0,63,91:0:0:63,91:2268,3210:-446.713,-261.695,-242.73,-185.375,0,-157.981	1/2:36:0,18,18:0:0:18,18:648,637:-105.009,-52.2237,-46.8051,-53.1422,0,-47.7236	1/2:33:0,20,13:0:0:20,13:720,443:-95.0181,-36.258,-30.2374,-59.1082,0,-55.1948	1/1:71:0,70,0:0:0:70,0:2516,0:-226.186,-21.0721,0,-226.186,-21.0721,-226.186	1/1:133:0,133,0:0:0:133,0:4769,0:-429.298,-40.037,0,-429.298,-40.037,-429.298	1/2:146:0,46,100:0:0:46,100:1648,3540:-422.449,-288.695,-274.848,-134.109,0,-104.006	1/1:79:0,79,0:0:0:79,0:2810,0:-253.133,-23.7814,0,-253.133,-23.7814,-253.133	1/1:45:0,45,0:0:0:45,0:1616,0:-145.716,-13.5464,0,-145.716,-13.5464,-145.716	1/1:100:0,100,0:0:0:100,0:3576,0:-322.035,-30.103,0,-322.035,-30.103,-322.035	2/2:13:0,1,12:0:0:1,12:36,430:-38.6782,-35.7406,-35.4396,-3.61236,-0.315115,0	1/1:72:0,72,0:0:0:72,0:2569,0:-231.152,-21.6742,0,-231.152,-21.6742,-231.152	1/2:80:0,34,46:0:0:34,46:1220,1625:-232.187,-132.684,-122.449,-99.8591,0,-86.0117	1/1:13:0,13,0:0:0:13,0:449,0:-40.7342,-3.91339,0,-40.7342,-3.91339,-40.7342	1/2:150:0,61,88:0:0:61,88:2166,3086:-427.646,-251.175,-232.812,-176.543,0,-150.052	1/2:41:0,13,27:0:0:13,27:468,964:-116.872,-78.6942,-74.7808,-38.2779,0,-30.1501	1/1:9:0,9,0:0:0:9,0:324,0:-29.504,-2.70927,0,-29.504,-2.70927,-29.504	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:80:0,80,0:0:0:80,0:2872,0:-258.716,-24.0824,0,-258.716,-24.0824,-258.716	1/1:142:0,142,0:0:0:142,0:5091,0:-457.61,-42.7463,0,-457.61,-42.7463,-457.61	1/2:14:0,5,9:0:0:5,9:180,318:-40.9382,-26.2487,-24.7436,-15.0469,0,-12.3376	1/1:119:0,118,0:0:0:118,0:4232,0:-380.689,-35.5215,0,-380.689,-35.5215,-380.689	1/1:72:0,70,2:0:0:70,2:2492,72:-224.144,-21.0721,0,-218.269,-14.8374,-217.667	1/2:50:0,24,26:0:0:24,26:856,918:-144.891,-75.1094,-67.8847,-70.136,0,-62.3092	1/1:67:0,67,0:0:0:67,0:2412,0:-217.329,-20.169,0,-217.329,-20.169,-217.329	1/1:129:0,127,1:0:0:127,1:4560,36:-410.029,-38.2308,0,-407.092,-35.2435,-406.791	1/2:227:0,52,175:0:0:52,175:1864,6167:-654.331,-502.319,-486.665,-152.369,0,-99.6892	1/2:58:0,27,31:0:0:27,31:963,1106:-168.932,-90.4373,-82.3095,-78.8512,0,-69.5192	1/1:49:0,49,0:0:0:49,0:1750,0:-156.81,-14.7505,0,-156.81,-14.7505,-156.81	1/2:57:0,27,30:0:0:27,30:972,1031:-163.382,-84.0645,-75.9366,-79.6701,0,-70.6392	1/2:24:0,18,6:0:0:18,6:648,211:-70.2409,-17.366,-11.9474,-53.2264,0,-51.4202	1/1:149:0,149,0:0:0:149,0:5341,0:-480.78,-44.8535,0,-480.78,-44.8535,-480.78	1/1:92:0,92,0:0:0:92,0:3286,0:-295.92,-27.6948,0,-295.92,-27.6948,-295.92	1/2:117:0,50,66:0:0:50,66:1786,2325:-334.733,-189.119,-174.067,-145.687,0,-125.819	1/2:136:0,34,102:0:0:34,102:1216,3630:-395.031,-295.878,-285.643,-99.5097,0,-68.8046	1/2:128:0,34,94:0:0:34,94:1224,3325:-370.834,-270.96,-260.725,-100.232,0,-71.9352	1/1:63:0,62,0:0:0:62,0:2232,0:-200.874,-18.6639,0,-200.874,-18.6639,-200.874	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:30:0,30,0:0:0:30,0:1076,0:-97.1482,-9.0309,0,-97.1482,-9.0309,-97.1482	1/1:84:0,84,0:0:0:84,0:3012,0:-271.048,-25.2865,0,-271.048,-25.2865,-271.048	1/1:258:0,258,0:0:0:258,0:9259,0:-832.586,-77.6657,0,-832.586,-77.6657,-832.586	1/1:50:0,50,0:0:0:50,0:1787,0:-161.11,-15.0515,0,-161.11,-15.0515,-161.11	1/2:60:0,27,33:0:0:27,33:956,1174:-173.805,-95.9447,-87.8169,-78.2149,0,-68.2809	1/2:51:0,13,38:0:0:13,38:468,1353:-147.706,-109.518,-105.605,-38.5453,0,-27.1062	1/2:96:0,44,52:0:0:44,52:1576,1844:-278.575,-150.045,-136.8,-128.886,0,-113.232	1/2:25:0,11,14:0:0:11,14:396,493:-72.7944,-40.4793,-37.168,-32.6714,0,-28.457	1/1:86:0,86,0:0:0:86,0:3084,0:-277.755,-25.8886,0,-277.755,-25.8886,-277.755	1/1:68:0,68,0:0:0:68,0:2440,0:-219.611,-20.47,0,-219.611,-20.47,-219.611	1/2:66:0,29,37:0:0:29,37:1044,1322:-193.294,-108.121,-99.3908,-85.5321,0,-74.394	1/2:128:0,61,65:0:0:61,65:2174,2282:-362.723,-185.547,-167.184,-177.2,0,-157.633	1/2:55:0,14,41:0:0:14,41:500,1443:-158.585,-117.82,-113.606,-41.1199,0,-28.7777	1/1:88:0,87,0:0:0:87,0:3105,0:-278.522,-26.1896,0,-278.522,-26.1896,-278.522	1/1:115:0,115,0:0:0:115,0:4124,0:-371.289,-34.6185,0,-371.289,-34.6185,-371.289
chr07	26103285	.	T	C	78483.2	PASS	AB=0.480874;ABP=9.40606;AC=145;AF=0.771277;AN=188;AO=3681;CIGAR=1X;DP=4732;DPB=4732;DPRA=0;EPP=7996.2;EPPR=2283.06;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9188;MQMR=59.9829;NS=94;NUMALT=1;ODDS=0.141393;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=131441;QR=37424;RO=1050;RPL=3681;RPP=7996.2;RPPR=2283.06;RPR=0;RUN=1;SAF=0;SAP=7996.2;SAR=3681;SRF=0;SRP=2283.06;SRR=1050;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:28:8,20:8:284:20:720:-56.6999,0,-17.4745	0/1:40:20,20:20:716:20:705:-51.7332,0,-52.6703	0/1:52:29,23:29:1044:23:820:-58.469,0,-78.6212	1/1:94:0,94:0:0:94:3368:-303.336,-28.2968,0	1/1:42:0,42:0:0:42:1493:-134.663,-12.6433,0	1/1:37:0,37:0:0:37:1312:-118.377,-11.1381,0	0/1:68:39,29:39:1404:29:1040:-73.4381,0,-106.189	1/1:57:1,56:1:36:56:1987:-175.504,-13.5604,0	0/1:149:74,75:74:2588:75:2665:-195.241,0,-188.311	0/1:34:25,9:25:896:9:324:-19.2708,0,-70.7253	1/1:21:0,21:0:0:21:756:-68.361,-6.32163,0	0/1:45:23,22:23:828:22:788:-57.6984,0,-61.2978	1/1:39:0,39:0:0:39:1379:-124.408,-11.7402,0	0/1:33:20,13:20:716:13:468:-32.5257,0,-54.8337	0/1:26:12,14:12:423:14:504:-37.8713,0,-30.5783	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:82:39,43:39:1392:43:1544:-114.56,0,-100.895	0/1:74:33,41:33:1188:41:1472:-110.5,0,-84.9524	1/1:82:0,82:0:0:82:2942:-265.008,-24.6845,0	0/1:136:65,71:65:2332:71:2524:-186.47,0,-169.199	1/1:20:1,19:1:36:19:684:-58.2921,-2.42233,0	0/1:80:34,46:34:1205:46:1644:-124.162,0,-84.6715	1/1:127:0,127:0:0:127:4552:-409.846,-38.2308,0	1/1:167:0,167:0:0:167:5947:-535.332,-50.272,0	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	1/1:133:0,133:0:0:133:4761:-428.575,-40.037,0	1/1:87:1,86:1:36:86:3075:-273.379,-22.5913,0	1/1:81:0,81:0:0:81:2904:-261.595,-24.3834,0	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	1/1:8:0,8:0:0:8:282:-25.7211,-2.40824,0	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	1/1:76:0,76:0:0:76:2711:-244.234,-22.8783,0	1/1:82:0,82:0:0:82:2929:-263.84,-24.6845,0	0/1:17:8,9:8:288:9:320:-24.0248,0,-21.1499	0/1:5:1,4:1:21:4:144:-11.8085,0,-0.594796	0/1:53:23,30:23:816:30:1076:-81.1983,0,-57.8071	1/1:19:0,19:0:0:19:671:-60.7158,-5.71957,0	0/1:104:45,59:45:1597:59:2101:-158.047,0,-112.711	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/1:19:9,10:9:324:10:352:-26.2986,0,-23.7863	1/1:69:0,69:0:0:69:2478:-223.273,-20.7711,0	1/1:61:0,61:0:0:61:2176:-196.107,-18.3628,0	0/1:69:38,31:38:1348:31:1086:-77.2748,0,-100.849	1/1:44:0,44:0:0:44:1576:-142.131,-13.2453,0	1/1:45:0,45:0:0:45:1595:-143.646,-13.5464,0	1/1:108:0,108:0:0:108:3852:-346.837,-32.5112,0	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.57002	1/1:80:0,80:0:0:80:2880:-259.436,-24.0824,0	0/1:40:28,12:28:1008:12:413:-25.4566,0,-78.9952	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:66:36,30:36:1277:30:1069:-75.9508,0,-95.3631	0/1:24:14,10:14:500:10:360:-25.5196,0,-38.1115	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:94:0,94:0:0:94:3368:-303.328,-28.2968,0	1/1:60:0,60:0:0:60:2148:-193.576,-18.0618,0	0/1:11:6,5:6:212:5:180:-13.2407,0,-16.1135	1/1:56:0,56:0:0:56:1992:-179.551,-16.8577,0	1/1:82:1,81:1:36:81:2901:-257.726,-21.0862,0	0/1:24:12,12:12:428:12:409:-29.9106,0,-31.6341	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	1/1:93:0,93:0:0:93:3321:-299.107,-27.9958,0	0/1:134:83,51:83:2946:51:1816:-123.383,0,-225.034	0/1:23:15,8:15:536:8:288:-19.3437,0,-41.6511	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	0/1:17:11,6:11:396:6:216:-14.673,0,-30.8652	0/1:14:6,8:6:208:8:288:-22.053,0,-14.8447	1/1:107:0,107:0:0:107:3820:-343.995,-32.2102,0	1/1:70:0,70:0:0:70:2496:-224.891,-21.0721,0	0/1:106:46,60:46:1640:60:2140:-160.959,0,-115.979	0/1:97:50,47:50:1766:47:1688:-123.007,0,-130.019	0/1:63:41,22:41:1461:22:784:-51.919,0,-112.819	1/1:25:0,25:0:0:25:900:-81.321,-7.52575,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:60:0,60:0:0:60:2144:-193.227,-18.0618,0	1/1:49:0,49:0:0:49:1748:-157.596,-14.7505,0	1/1:65:1,63:1:36:63:2229:-197.273,-16.0275,0	1/1:28:0,28:0:0:28:1000:-90.2588,-8.42884,0	0/1:29:18,11:18:648:11:392:-26.8902,0,-49.922	0/1:21:13,8:13:468:8:284:-19.5817,0,-36.138	0/1:61:30,31:30:1080:31:1103:-81.217,0,-79.1504	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	0/1:28:12,16:12:428:16:576:-43.7379,0,-30.43	0/1:46:23,23:23:828:23:819:-60.1842,0,-60.9967	0/1:40:26,14:26:924:14:473:-30.8498,0,-71.4365	1/1:70:0,70:0:0:70:2493:-224.622,-21.0721,0	1/1:29:0,29:0:0:29:1036:-93.5539,-8.72987,0
chr07	26325743	.	GCCC	ACCC,ACCT	308787	PASS	AB=0.484642,0.509104;ABP=14.1488,6.9247;AC=144,44;AF=0.765957,0.234043;AN=188;AO=11444,2782;CIGAR=1X3M,1X2M1X;DP=14312;DPB=14312;DPRA=0,0.800843;EPP=24836,6044.05;EPPR=35.5824;GTI=3;LEN=1,4;MEANALT=2.19149,2.7;MQM=59.9907,59.4313;MQMR=60;NS=94;NUMALT=2;ODDS=6.25768;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=408358,96996;QR=525;RO=15;RPL=2,0;RPP=24836,6044.05;RPPR=35.5824;RPR=11442,2782;RUN=1,1;SAF=0,0;SAP=24853.3,6044.05;SAR=11444,2782;SRF=0;SRP=35.5824;SRR=15;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:32:0,14,18:0:0:14,18:496,646:-93.4461,-53.0423,-48.8279,-40.7598,0,-35.3413	1/2:199:0,96,102:0:0:96,102:3411,3595:-570.69,-292.739,-263.84,-278.033,0,-247.328	1/2:248:0,108,138:0:0:108,138:3846,4864:-709.495,-396.024,-363.512,-313.524,0,-271.982	1/1:446:0,444,0:0:0:444,0:15811,0:-1422.35,-133.657,0,-1422.35,-133.657,-1422.35	1/1:152:2,150,0:2:72:150,0:5396,0:-478.931,-38.9198,0,-479.533,-45.1545,-485.408	1/1:75:0,75,0:0:0:75,0:2662,0:-239.826,-22.5773,0,-239.826,-22.5773,-239.826	1/2:154:0,72,80:0:0:72,80:2562,2799:-436.53,-227.727,-206.053,-208.825,0,-184.742	1/1:263:0,263,0:0:0:263,0:9357,0:-842.098,-79.1709,0,-842.098,-79.1709,-842.098	1/2:105:0,52,53:0:0:52,53:1868,1836:-301.954,-149.561,-133.908,-152.746,0,-136.791	1/2:117:0,52,65:0:0:52,65:1859,2225:-332.513,-180.928,-165.275,-151.935,0,-132.368	1/1:59:0,58,0:0:0:58,0:2072,0:-186.498,-17.4597,0,-186.498,-17.4597,-186.498	1/2:88:0,45,43:0:0:45,43:1603,1456:-249.032,-118.366,-104.82,-131.013,0,-118.069	1/1:85:2,83,0:2:72:83,0:2966,0:-260.335,-18.7508,0,-260.937,-24.9855,-266.812	1/2:88:0,52,34:0:0:52,34:1855,1186:-247.768,-96.5417,-80.8881,-151.312,0,-141.077	1/2:84:0,46,38:0:0:46,38:1628,1343:-242.333,-109.728,-95.8805,-132.959,0,-121.52	1/1:67:0,65,0:0:0:65,0:2312,0:-207.98,-19.567,0,-207.98,-19.567,-207.98	1/1:119:0,119,0:0:0:119,0:4237,0:-381.51,-35.8226,0,-381.51,-35.8226,-381.51	1/1:73:0,72,0:0:0:72,0:2556,0:-230.04,-21.6742,0,-230.04,-21.6742,-230.04	1/1:40:0,40,0:0:0:40,0:1425,0:-128.547,-12.0412,0,-128.547,-12.0412,-128.547	1/2:208:0,108,98:0:0:108,98:3880,3413:-594.048,-277.519,-245.007,-316.573,0,-287.072	1/2:199:0,92,107:0:0:92,107:3282,3735:-571.691,-304.14,-276.445,-267.904,0,-235.694	1/1:235:0,232,0:0:0:232,0:8317,0:-748.261,-69.839,0,-748.261,-69.839,-748.261	1/2:117:0,53,64:0:0:53,64:1872,2230:-333.699,-181.519,-165.564,-152.531,0,-133.265	1/2:109:0,97,12:0:0:97,12:3488,417:-318.83,-34.2491,-5.04924,-284.93,0,-281.317	1/2:118:0,52,66:0:0:52,66:1864,2324:-341.559,-189.528,-173.875,-152.386,0,-132.518	1/1:683:0,681,0:0:0:681,0:24232,0:-2179.87,-205.001,0,-2179.87,-205.001,-2179.87	1/1:351:0,351,0:0:0:351,0:12502,0:-1125.01,-105.662,0,-1125.01,-105.662,-1125.01	1/2:39:0,19,20:0:0:19,20:680,706:-113.294,-57.8402,-52.1206,-55.8096,0,-49.789	1/1:329:0,329,0:0:0:329,0:11799,0:-1061.77,-99.0389,0,-1061.77,-99.0389,-1061.77	1/1:241:3,236,0:3:102:236,0:8425,0:-748.746,-62.7575,0,-749.649,-71.0431,-757.922	1/1:181:0,181,0:0:0:181,0:6431,0:-578.878,-54.4864,0,-578.878,-54.4864,-578.878	1/1:13:0,13,0:0:0:13,0:468,0:-42.4596,-3.91339,0,-42.4596,-3.91339,-42.4596	1/1:19:0,19,0:0:0:19,0:680,0:-61.5292,-5.71957,0,-61.5292,-5.71957,-61.5292	1/2:13:0,10,3:0:0:10,3:345,107:-37.0958,-9.07908,-6.06878,-28.3705,0,-27.4674	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/2:20:0,10,10:0:0:10,10:360,330:-56.352,-26.9626,-23.9523,-29.734,0,-26.7237	1/1:267:0,265,0:0:0:265,0:9482,0:-853.108,-79.773,0,-853.108,-79.773,-853.108	1/1:473:0,472,0:0:0:472,0:16841,0:-1515.11,-142.086,0,-1515.11,-142.086,-1515.11	1/2:93:0,44,47:0:0:44,47:1549,1577:-253.8,-127.688,-114.443,-126.125,0,-111.977	1/2:5:0,4,1:0:0:4,1:144,36:-15.0469,-3.29724,-2.09312,-12.1095,0,-11.8085	1/2:249:0,139,109:0:0:139,109:4977,3798:-714.218,-308.336,-266.493,-406.002,0,-373.19	1/1:41:0,41,0:0:0:41,0:1472,0:-132.776,-12.3422,0,-132.776,-12.3422,-132.776	1/2:226:0,106,119:0:0:106,119:3799,4157:-647.1,-337.255,-305.346,-309.917,0,-274.094	1/2:134:0,63,69:0:0:63,69:2256,2387:-378.047,-194.06,-175.095,-184.085,0,-163.314	1/2:77:0,34,41:0:0:34,41:1192,1392:-209.926,-112.923,-102.688,-97.0422,0,-84.7	1/1:119:0,119,0:0:0:119,0:4259,0:-383.488,-35.8226,0,-383.488,-35.8226,-383.488	1/1:156:0,156,0:0:0:156,0:5561,0:-500.615,-46.9607,0,-500.615,-46.9607,-500.615	1/2:298:0,156,141:0:0:156,141:5581,4961:-859.013,-403.918,-356.957,-455.198,0,-412.753	1/1:166:0,164,0:0:0:164,0:5892,0:-530.027,-49.3689,0,-530.027,-49.3689,-530.027	1/1:406:0,404,0:0:0:404,0:14448,0:-1299.78,-121.616,0,-1299.78,-121.616,-1299.78	1/1:172:1,170,0:1:36:170,0:6077,0:-543.433,-48.2377,0,-543.734,-51.1751,-546.671	1/2:15:0,4,11:0:0:4,11:144,382:-43.1542,-31.4012,-30.1971,-12.1095,0,-8.79817	1/1:184:0,182,0:0:0:182,0:6498,0:-584.553,-54.7875,0,-584.553,-54.7875,-584.553	1/2:68:0,40,28:0:0:40,28:1436,991:-198.213,-81.0724,-69.0312,-117.496,0,-109.068	1/1:15:0,15,0:0:0:15,0:540,0:-48.9365,-4.51545,0,-48.9365,-4.51545,-48.9365	1/2:240:0,120,119:0:0:120,119:4281,4129:-683.965,-334.972,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chr07	26325776	.	A	G	46419.1	PASS	AB=0.50274;ABP=3.36732;AC=44;AF=0.234043;AN=188;AO=2768;CIGAR=1X;DP=14505;DPB=14505;DPRA=0.788143;EPP=6013.65;EPPR=25472.2;GTI=3;LEN=1;MEANALT=1.03922;MQM=59.3902;MQMR=59.9744;NS=94;NUMALT=1;ODDS=7.65724;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98927;QR=419696;RO=11733;RPL=2768;RPP=6013.65;RPPR=25472.2;RPR=0;RUN=1;SAF=0;SAP=6013.65;SAR=2768;SRF=0;SRP=25480.9;SRR=11733;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:14,18:14:500:18:644:-48.6425,0,-35.7032	0/1:201:101,100:101:3632:100:3577:-261.599,0,-266.577	0/1:249:114,135:114:4080:135:4837:-360.446,0,-292.422	0/0:445:445,0:445:15888:0:0:0,-133.958,-1429.61	0/0:155:155,0:155:5551:0:0:0,-46.6596,-499.713	0/0:76:76,0:76:2710:0:0:0,-22.8783,-244.143	0/1:157:76,80:76:2712:80:2872:-211.508,0,-197.132	0/0:265:265,0:265:9479:0:0:0,-79.7729,-853.07	0/1:108:56,52:56:1995:52:1848:-134.083,0,-147.312	0/1:116:53,63:53:1900:63:2249:-167.692,0,-136.358	0/0:60:60,0:60:2124:0:0:0,-18.0618,-191.356	0/1:89:46,43:46:1643:43:1540:-112.052,0,-121.366	0/0:88:88,0:88:3131:0:0:0,-26.4906,-282.017	0/1:90:53,37:53:1904:37:1316:-91.6394,0,-144.545	0/1:86:48,38:48:1710:38:1353:-96.1775,0,-128.293	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/0:124:123,1:123:4420:1:36:0,-33.7294,-394.372	0/0:75:75,0:75:2684:0:0:0,-22.5772,-241.805	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/1:203:110,93:110:3918:93:3344:-239.775,0,-291.704	0/1:203:97,106:97:3484:106:3808:-281.803,0,-252.661	0/0:243:243,0:243:8708:0:0:0,-73.1503,-783.71	0/1:116:54,62:54:1944:62:2224:-165.388,0,-140.317	0/1:115:102,13:102:3664:13:468:-7.8412,0,-295.344	0/1:119:53,66:53:1888:66:2372:-177.888,0,-134.374	0/0:689:689,0:689:24669:0:0:0,-207.41,-2219.44	0/0:359:359,0:359:12851:0:0:0,-108.07,-1156.41	0/1:39:19,20:19:684:20:716:-53.0229,0,-50.1502	0/0:340:339,0:339:12143:0:0:0,-102.049,-1092.5	0/0:241:241,0:241:8635:0:0:0,-72.5482,-777.143	0/0:180:180,0:180:6448:0:0:0,-54.1854,-580.401	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:12:9,3:9:315:3:108:-6.46281,0,-25.0749	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:20:10,10:10:352:10:360:-26.532,0,-25.9976	0/0:269:269,0:269:9643:0:0:0,-80.9771,-867.819	0/0:482:482,0:482:17238:0:0:0,-145.096,-1551.05	0/1:92:45,47:45:1616:47:1659:-121.864,0,-118.035	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:248:142,106:142:5072:106:3779:-264.91,0,-381.948	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/1:235:115,120:115:4127:120:4300:-314.624,0,-300.87	0/1:135:67,68:67:2400:68:2435:-178.759,0,-175.618	0/1:77:35,42:35:1236:42:1504:-111.847,0,-88.3594	0/0:125:125,0:125:4452:0:0:0,-37.6287,-400.853	0/0:162:162,0:162:5800:0:0:0,-48.7669,-522.114	0/1:298:156,142:156:5572:142:5053:-365.154,0,-411.896	0/0:169:169,0:169:6057:0:0:0,-50.8741,-545.23	0/0:417:417,0:417:14887:0:0:0,-125.53,-1339.07	0/0:171:171,0:171:6089:0:0:0,-51.4761,-548.111	0/1:14:3,11:3:108:11:392:-31.4056,0,-5.86075	0/0:194:194,0:194:6964:0:0:0,-58.3998,-626.822	0/1:68:40,28:40:1436:28:1008:-70.5636,0,-109.068	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:241:125,116:125:4459:116:4101:-296.489,0,-328.933	0/1:89:33,56:33:1188:56:2004:-153.235,0,-80.4369	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.37	0/0:128:128,0:128:4569:0:0:0,-38.5318,-411.375	0/0:177:174,3:174:6204:3:108:0,-43.2071,-548.382	0/1:24:9,15:9:320:15:525:-40.3533,0,-21.9176	0/0:464:464,0:464:16579:0:0:0,-139.678,-1491.78	0/0:360:354,6:354:12688:6:216:0,-88.5803,-1121.82	0/1:147:71,76:71:2531:76:2720:-200.468,0,-183.79	0/0:145:145,0:145:5175:0:0:0,-43.6493,-465.889	0/0:257:255,2:255:9123:2:72:0,-70.528,-813.838	0/1:138:38,100:38:1364:100:3566:-279.502,0,-81.5186	0/1:24:16,8:16:563:8:287:-18.9481,0,-43.7744	0/0:95:95,0:95:3367:0:0:0,-28.5978,-303.246	0/1:123:54,69:54:1935:69:2445:-183.081,0,-137.398	0/1:31:15,16:15:532:16:572:-42.4791,0,-38.8812	0/0:115:115,0:115:4108:0:0:0,-34.6184,-369.906	0/0:90:90,0:90:3236:0:0:0,-27.0927,-291.461	0/1:213:103,110:103:3688:110:3927:-289.467,0,-267.067	0/1:307:144,163:144:5154:163:5833:-432.608,0,-371.583	0/1:354:180,173:180:6434:173:6189:-450.213,0,-472.668	0/0:229:227,2:227:8121:2:72:0,-62.0991,-723.799	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:153:153,0:153:5469:0:0:0,-46.0576,-492.337	0/0:254:253,1:253:9080:1:36:0,-72.8633,-813.574	0/0:290:290,0:290:10363:0:0:0,-87.2987,-932.594	0/0:140:140,0:140:5011:0:0:0,-42.1442,-451.134	0/1:56:27,29:27:954:29:1036:-76.6939,0,-69.3163	0/1:123:56,67:56:2008:67:2408:-179.772,0,-143.967	0/1:184:94,90:94:3372:90:3218:-234.422,0,-248.306	0/1:61:33,28:33:1188:28:1008:-72.6396,0,-88.8658	0/0:92:91,0:91:3255:0:0:0,-27.3937,-292.957	0/0:86:86,0:86:3066:0:0:0,-25.8886,-276.168	0/1:37:19,18:19:684:18:640:-46.7275,0,-50.7522	0/1:103:47,56:47:1684:56:2007:-149.738,0,-120.841	0/1:93:35,58:35:1239:58:2063:-157.907,0,-83.8179	0/0:193:193,0:193:6904:0:0:0,-58.0988,-621.425	0/0:133:132,1:132:4718:1:36:0,-36.4387,-421.18
chr07	26538627	.	A	G	97846.4	PASS	AB=0.500059;ABP=3.01056;AC=44;AF=0.234043;AN=188;AO=4240;CIGAR=1X;DP=18335;DPB=18335;DPRA=1.37044;EPP=24.3235;EPPR=498.947;GTI=0;LEN=1;MEANALT=1.03571;MQM=59.9408;MQMR=59.9581;NS=94;NUMALT=1;ODDS=0.570546;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=151035;QR=502799;RO=14092;RPL=4159;RPP=8519.94;RPPR=29017.6;RPR=81;RUN=1;SAF=1937;SAP=71.6145;SAR=2303;SRF=5964;SRP=724.61;SRR=8128;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:19,19:19:680:19:671:-49.2704,0,-50.09	0/1:126:69,57:69:2480:57:2024:-144.178,0,-185.523	0/1:266:111,155:111:3984:155:5497:-414.784,0,-278.569	0/0:520:516,4:516:18410:4:144:0,-143.222,-1643.14	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/1:254:142,112:142:5056:112:3986:-282.468,0,-378.716	0/0:128:128,0:128:4587:0:0:0,-38.5318,-412.924	0/1:172:57,115:57:2027:115:4098:-317.228,0,-130.92	0/1:246:118,128:118:4236:128:4584:-338.671,0,-307.365	0/0:164:164,0:164:5851:0:0:0,-49.3689,-526.628	0/1:139:73,66:73:2554:66:2355:-170.357,0,-188.265	0/0:86:86,0:86:3088:0:0:0,-25.8886,-278.147	0/1:186:87,99:87:3116:99:3528:-261.738,0,-224.675	0/1:220:111,109:111:3967:109:3910:-285.866,0,-290.994	0/0:175:174,1:174:6236:1:36:0,-49.082,-557.692	0/0:41:41,0:41:1463:0:0:0,-12.3422,-131.965	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/1:401:211,190:211:7540:190:6789:-490.366,0,-557.93	0/1:411:211,200:211:7529:200:7108:-515.355,0,-553.909	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/1:241:132,109:132:4707:109:3882:-277.027,0,-351.222	0/1:157:137,20:137:4903:20:699:-15.9648,0,-394.159	0/1:100:61,39:61:2184:39:1379:-94.3004,0,-166.723	0/0:573:569,4:569:20317:4:144:0,-159.177,-1814.72	0/0:717:717,0:717:25579:0:0:0,-215.838,-2301.33	0/1:123:70,53:70:2492:53:1892:-133.531,0,-187.504	0/0:588:588,0:588:20996:0:0:0,-177.006,-1889.11	0/0:238:235,3:235:8378:3:104:0,-61.9423,-744.326	0/0:309:308,0:308:10972:0:0:0,-92.7172,-987.014	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.174	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/0:543:542,1:542:19308:1:36:0,-159.861,-1733.66	0/0:188:186,2:186:6656:2:72:0,-49.7569,-592.278	0/1:46:26,20:26:936:20:720:-51.2814,0,-70.7121	0/1:4:2,2:2:68:2:72:-5.6326,0,-5.25359	0/1:405:187,218:187:6680:218:7815:-581.456,0,-479.362	0/0:77:77,0:77:2734:0:0:0,-23.1793,-246.3	0/1:154:81,73:81:2892:73:2600:-187.89,0,-214.158	0/1:226:116,110:116:4151:110:3910:-284.063,0,-305.74	0/1:194:99,95:99:3508:95:3392:-247.067,0,-257.531	0/0:195:195,0:195:6945:0:0:0,-58.7008,-625.095	0/0:70:70,0:70:2507:0:0:0,-21.0721,-225.873	0/1:379:186,193:186:6632:193:6849:-502.392,0,-482.869	0/0:181:181,0:181:6458:0:0:0,-54.4864,-581.305	0/0:328:328,0:328:11743:0:0:0,-98.7378,-1056.72	0/0:276:276,0:276:9835:0:0:0,-83.0843,-885.098	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/0:136:136,0:136:4860:0:0:0,-40.9401,-437.182	0/1:107:45,62:45:1612:62:2164:-162.805,0,-113.16	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:354:214,140:214:7656:140:4948:-338.901,0,-582.509	0/1:93:48,45:48:1700:45:1599:-116.204,0,-125.287	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:231:230,1:230:8191:1:36:0,-65.9397,-733.505	0/0:269:263,6:263:9373:6:216:0,-61.1866,-823.747	0/1:8:4,4:4:140:4:140:-10.5363,0,-10.5363	0/0:321:321,0:321:11450:0:0:0,-96.6306,-1030.38	0/0:381:376,5:376:13387:5:180:0,-98.1404,-1188.07	0/1:152:73,79:73:2604:79:2812:-207.564,0,-188.852	0/0:184:184,0:184:6543:0:0:0,-55.3895,-588.955	0/0:403:400,3:400:14230:3:108:0,-111.24,-1270.39	0/1:404:117,286:117:4172:286:10187:-795.004,0,-253.989	0/1:107:58,49:58:2070:49:1748:-125.394,0,-154.359	0/0:79:78,1:78:2775:1:32:0,-20.5821,-246.791	0/1:215:103,112:103:3671:112:3983:-293.938,0,-265.873	0/1:45:33,12:33:1184:12:428:-25.3125,0,-93.322	0/0:147:147,0:147:5243:0:0:0,-44.2514,-471.903	0/0:137:137,0:137:4881:0:0:0,-41.2411,-439.443	0/1:586:311,274:311:11132:274:9783:-703.887,0,-825.307	0/1:393:182,211:182:6488:211:7484:-555.3,0,-465.701	0/1:18:6,12:6:216:12:432:-33.8027,0,-14.372	0/0:68:68,0:68:2421:0:0:0,-20.47,-218.145	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:252:249,3:249:8899:3:108:0,-65.7844,-790.82	0/0:109:109,0:109:3890:0:0:0,-32.8123,-350.26	0/0:490:490,0:490:17501:0:0:0,-147.505,-1574.37	0/0:254:254,0:254:9053:0:0:0,-76.4616,-814.735	0/1:205:107,98:107:3819:98:3490:-252.6,0,-282.196	0/1:222:123,99:123:4375:99:3552:-253.059,0,-327.098	0/1:391:207,184:207:7394:184:6570:-473.675,0,-547.799	0/1:34:17,17:17:608:17:612:-45.1784,0,-44.817	0/0:70:70,0:70:2503:0:0:0,-21.0721,-225.522	0/0:86:86,0:86:3057:0:0:0,-25.8886,-275.042	0/1:104:48,56:48:1720:56:2000:-148.967,0,-123.778	0/1:253:128,125:128:4565:125:4472:-326.489,0,-334.855	0/1:207:59,148:59:2087:148:5259:-411.132,0,-125.787	0/0:330:330,0:330:11677:0:0:0,-99.3399,-1050.8	0/0:314:314,0:314:11219:0:0:0,-94.5234,-1009.6
chr07	26548281	.	A	G	170026	PASS	AB=0.533585;ABP=31.5981;AC=147;AF=0.781915;AN=188;AO=7829;CIGAR=1X;DP=9203;DPB=9203;DPRA=0;EPP=17003.5;EPPR=2982.27;GTI=4;LEN=1;MEANALT=1.02128;MQM=59.9425;MQMR=59.9373;NS=94;NUMALT=1;ODDS=2.57307;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=278566;QR=49040;RO=1372;RPL=0;RPP=17003.5;RPPR=2982.27;RPR=7829;RUN=1;SAF=0;SAP=17003.5;SAR=7829;SRF=0;SRP=2982.27;SRR=1372;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:33:25,8:25:877:8:280:-15.6047,0,-69.3112	0/1:163:69,94:69:2471:94:3336:-251.389,0,-173.575	0/1:128:55,73:55:1980:73:2593:-195.086,0,-139.943	1/1:239:0,239:0:0:239:8518:-766.461,-71.9462,0	1/1:156:1,155:1:36:155:5565:-497.329,-43.3624,0	1/1:54:0,54:0:0:54:1916:-172.714,-16.2556,0	0/1:112:58,53:58:2065:53:1891:-136.69,0,-152.345	1/1:244:0,244:0:0:244:8657:-779.128,-73.4513,0	0/1:76:38,38:38:1364:38:1327:-96.8479,0,-100.182	0/1:62:33,29:33:1184:29:1040:-75.2505,0,-88.2045	1/1:25:0,25:0:0:25:860:-77.7116,-7.52575,0	0/1:30:21,9:21:739:9:303:-18.5589,0,-57.7717	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	0/1:14:8,6:8:284:6:201:-14.2026,0,-21.6889	0/1:34:19,15:19:684:15:540:-38.7015,0,-51.6553	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:20:0,20:0:0:20:698:-63.1414,-6.0206,0	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:289:128,161:128:4566:161:5736:-428.581,0,-324.02	0/1:130:60,70:60:2152:70:2487:-184.95,0,-154.813	1/1:215:0,215:0:0:215:7627:-686.473,-64.7215,0	0/1:70:34,36:34:1209:36:1292:-95.5035,0,-88.042	1/1:45:1,44:1:36:44:1576:-138.533,-9.94808,0	0/1:129:69,60:69:2457:60:2131:-153.225,0,-182.55	1/1:446:0,446:0:0:446:15873:-1428.26,-134.259,0	1/1:230:0,230:0:0:230:8200:-738.009,-69.2369,0	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	1/1:359:1,358:1:36:358:12737:-1142.47,-104.471,0	1/1:175:0,175:0:0:175:6201:-558.179,-52.6803,0	1/1:232:0,232:0:0:232:8232:-740.89,-69.839,0	1/1:14:0,14:0:0:14:493:-44.7017,-4.21442,0	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	0/1:12:5,7:5:180:7:237:-18.0467,0,-12.9397	1/1:97:0,97:0:0:97:3453:-310.825,-29.1999,0	1/1:251:0,251:0:0:251:8960:-806.38,-75.5585,0	0/1:16:9,7:9:320:7:248:-17.8477,0,-24.3259	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:165:65,100:65:2336:100:3570:-271.836,0,-160.829	1/1:20:0,20:0:0:20:693:-62.6894,-6.0206,0	0/1:103:50,53:50:1791:53:1904:-140.632,0,-130.466	0/1:31:15,16:15:540:16:553:-40.7621,0,-39.6046	0/1:29:12,17:12:432:17:608:-46.3222,0,-30.4913	1/1:157:0,157:0:0:157:5603:-504.378,-47.2617,0	1/1:161:0,161:0:0:161:5754:-517.975,-48.4658,0	0/1:100:31,69:31:1095:69:2453:-190.92,0,-68.7561	1/1:154:0,154:0:0:154:5497:-494.853,-46.3586,0	1/1:109:0,109:0:0:109:3895:-350.744,-32.8123,0	1/1:184:0,184:0:0:184:6571:-591.47,-55.3895,0	0/1:24:9,15:9:324:15:536:-41.3501,0,-22.2811	1/1:249:0,249:0:0:249:8891:-800.126,-74.9565,0	0/1:59:16,43:16:576:43:1528:-120.052,0,-34.4142	1/1:23:0,23:0:0:23:809:-73.125,-6.92369,0	0/1:109:54,55:54:1936:55:1953:-143.231,0,-141.704	0/1:59:29,30:29:1044:30:1068:-78.6713,0,-76.514	1/1:12:0,12:0:0:12:424:-38.4964,-3.61236,0	1/1:35:0,35:0:0:35:1239:-111.805,-10.5361,0	1/1:75:0,75:0:0:75:2665:-240.095,-22.5773,0	1/1:73:1,72:1:36:72:2528:-224.172,-18.3769,0	0/1:10:1,9:1:36:9:324:-26.4956,0,-0.587975	1/1:276:0,276:0:0:276:9814:-883.207,-83.0843,0	1/1:204:6,198:6:216:198:7022:-612.257,-41.6196,0	0/1:51:21,30:21:756:30:1072:-81.4399,0,-53.0147	1/1:112:0,112:0:0:112:3964:-356.95,-33.7154,0	1/1:230:0,230:0:0:230:8183:-736.483,-69.2369,0	0/1:128:64,64:64:2296:64:2287:-167.559,0,-168.369	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:53:0,53:0:0:53:1900:-171.272,-15.9546,0	0/1:45:23,22:23:811:22:766:-55.7121,0,-59.7636	0/1:16:5,11:5:176:11:396:-31.1663,0,-11.3685	1/1:143:0,143:0:0:143:5055:-455.093,-43.0473,0	1/1:51:0,51:0:0:51:1807:-162.91,-15.3525,0	0/1:134:60,74:60:2135:74:2636:-197.018,0,-152.08	0/1:167:64,103:64:2295:103:3675:-280.682,0,-156.538	0/1:143:77,66:77:2768:66:2360:-169.611,0,-206.313	1/1:125:1,123:1:36:123:4407:-393.203,-34.0893,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:141:0,141:0:0:141:4994:-449.593,-42.4452,0	1/1:140:0,140:0:0:140:4967:-447.147,-42.1442,0	1/1:267:1,266:1:36:266:9468:-848.462,-76.7767,0	1/1:51:0,51:0:0:51:1824:-164.441,-15.3525,0	0/1:30:16,14:16:572:14:500:-36.3053,0,-42.7825	0/1:33:16,17:16:564:17:604:-44.7566,0,-41.1563	0/1:53:24,29:24:856:29:1036:-77.5993,0,-59.7722	0/1:46:24,22:24:856:22:779:-56.5847,0,-63.5137	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	1/1:37:0,37:0:0:37:1319:-119.011,-11.1381,0	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/1:28:16,12:16:572:12:413:-29.069,0,-43.3846	0/1:33:26,7:26:913:7:248:-12.7302,0,-72.55	1/1:181:0,181:0:0:181:6444:-579.823,-54.4864,0	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0
chr08	12841	.	T	C	249200	PASS	AB=0.469642;ABP=33.8617;AC=149;AF=0.792553;AN=188;AO=8990;CIGAR=1X;DP=11069;DPB=11069;DPRA=0;EPP=152.235;EPPR=89.8524;GTI=1;LEN=1;MEANALT=1.05319;MQM=59.9924;MQMR=59.999;NS=94;NUMALT=1;ODDS=5.25158;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=321617;QR=74403;RO=2074;RPL=4096;RPP=156.826;RPPR=91.0628;RPR=4894;RUN=1;SAF=6;SAP=19472.5;SAR=8984;SRF=3;SRP=4480.62;SRR=2071;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:34:18,16:18:648:16:568:-41.2163,0,-48.4169	1/1:166:0,166:0:0:166:5950:-535.606,-49.971,0	0/1:84:48,36:48:1724:36:1292:-91.2972,0,-130.159	0/1:187:114,73:114:4096:73:2624:-180.114,0,-312.531	0/1:53:27,26:27:934:26:920:-67.1611,0,-68.4141	0/1:69:33,36:33:1188:36:1296:-96.1729,0,-86.4575	1/1:103:2,101:2:72:101:3628:-319.032,-24.1694,0	1/1:156:0,155:0:0:155:5541:-498.454,-46.6597,0	1/1:97:1,96:1:36:96:3433:-305.583,-25.6016,0	1/1:94:0,94:0:0:94:3355:-302.167,-28.2968,0	0/1:79:15,64:15:540:64:2286:-182.219,0,-25.1552	1/1:52:0,52:0:0:52:1861:-167.768,-15.6536,0	1/1:44:0,44:0:0:44:1580:-142.492,-13.2453,0	0/1:25:14,11:14:504:11:396:-28.457,0,-38.1723	1/1:53:0,53:0:0:53:1904:-171.638,-15.9546,0	1/1:50:0,50:0:0:50:1796:-161.922,-15.0515,0	1/1:51:0,51:0:0:51:1832:-165.161,-15.3525,0	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	1/1:72:0,72:0:0:72:2583:-232.718,-21.6742,0	1/1:222:0,222:0:0:222:7973:-717.587,-66.8287,0	1/1:165:1,164:1:36:164:5868:-524.633,-46.0717,0	0/1:136:95,41:95:3412:41:1446:-89.4918,0,-266.352	1/1:93:0,93:0:0:93:3320:-299.018,-27.9958,0	0/1:157:63,94:63:2256:94:3378:-256.973,0,-156.041	1/1:57:0,57:0:0:57:2037:-183.601,-17.1587,0	1/1:333:4,329:4:144:329:11747:-1043.78,-86.9294,0	0/1:198:99,99:99:3556:99:3552:-260.284,0,-260.643	0/1:42:27,15:27:972:15:536:-35.9316,0,-75.1546	1/1:175:0,175:0:0:175:6276:-564.932,-52.6803,0	1/1:211:8,203:8:284:203:7267:-628.177,-37.614,0	0/1:134:82,52:82:2948:52:1852:-126.622,0,-225.215	1/1:498:7,491:7:252:491:17559:-1556.9,-126.884,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:305:5,300:5:180:300:10760:-951.75,-75.2621,0	1/1:473:0,472:0:0:472:16820:-1513.09,-142.086,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:166:0,166:0:0:166:5957:-536.233,-49.971,0	0/1:259:114,145:114:4085:145:5129:-383.782,0,-289.867	0/1:65:34,31:34:1224:31:1116:-81.1847,0,-90.9001	1/1:139:0,139:0:0:139:4980:-448.348,-41.8432,0	0/1:119:69,50:69:2472:50:1796:-126.1,0,-186.911	0/1:90:23,67:23:824:67:2412:-190.243,0,-47.3906	1/1:136:0,136:0:0:136:4846:-436.293,-40.9401,0	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:67:0,67:0:0:67:2403:-216.526,-20.169,0	0/1:74:39,35:39:1389:35:1260:-91.4293,0,-103.031	0/1:155:76,79:76:2728:79:2832:-208.459,0,-199.103	0/1:266:125,141:125:4473:141:5047:-374.299,0,-322.664	1/1:187:0,187:0:0:187:6658:-599.298,-56.2926,0	1/1:146:0,146:0:0:146:5191:-467.33,-43.9504,0	1/1:149:0,149:0:0:149:5351:-481.721,-44.8535,0	0/1:14:12,2:12:432:2:72:-2.6223,0,-35.0068	0/1:158:79,79:79:2836:79:2832:-207.556,0,-207.915	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:24:18,6:18:648:6:216:-12.5658,0,-51.4272	1/1:132:0,132:0:0:132:4736:-426.397,-39.736,0	0/1:32:15,17:15:540:17:608:-45.4191,0,-39.3036	1/1:314:0,314:0:0:314:11192:-1007.17,-94.5234,0	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/1:60:22,38:22:792:38:1360:-104.639,0,-53.5439	0/1:86:55,31:55:1976:31:1112:-74.5028,0,-152.226	1/1:8:0,8:0:0:8:273:-24.9002,-2.40824,0	0/1:194:136,58:136:4888:58:2076:-128.711,0,-381.67	1/1:221:0,220:0:0:220:7875:-708.415,-66.2266,0	1/1:75:1,74:1:36:74:2656:-235.687,-18.979,0	1/1:88:0,88:0:0:88:3128:-281.745,-26.4906,0	1/1:192:1,191:1:36:191:6845:-612.519,-54.1995,0	0/1:88:57,31:57:2033:31:1097:-72.5474,0,-156.75	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:80:0,80:0:0:80:2868:-258.357,-24.0824,0	0/1:65:40,25:40:1440:25:900:-61.7541,0,-110.331	1/1:187:0,187:0:0:187:6675:-600.826,-56.2926,0	1/1:101:0,101:0:0:101:3611:-325.166,-30.404,0	0/1:95:56,38:56:2008:38:1364:-94.4041,0,-152.337	1/1:120:0,120:0:0:120:4296:-386.814,-36.1236,0	1/1:143:1,142:1:36:142:5087:-454.373,-39.449,0	1/1:102:0,102:0:0:102:3629:-326.815,-30.7051,0	1/1:110:0,110:0:0:110:3956:-356.23,-33.1133,0	0/1:24:16,8:16:576:8:288:-19.0427,0,-44.9503	0/1:180:103,76:103:3700:76:2718:-190.618,0,-278.957	0/1:119:68,51:68:2440:51:1828:-128.978,0,-184.032	1/1:324:0,324:0:0:324:11585:-1042.52,-97.5337,0	0/1:85:51,34:51:1836:34:1224:-84.8795,0,-139.933	1/1:40:1,39:1:36:39:1404:-123.061,-8.44293,0	0/1:89:56,33:56:2012:33:1188:-80.4369,0,-154.561	1/1:134:0,134:0:0:134:4785:-430.806,-40.338,0	1/1:38:0,38:0:0:38:1363:-122.971,-11.4391,0	0/1:69:38,31:38:1368:31:1116:-79.9806,0,-102.65	1/1:69:0,69:0:0:69:2460:-221.652,-20.7711,0	0/1:90:10,80:10:360:80:2880:-232.343,0,-5.6516	0/1:70:46,24:46:1648:24:864:-57.0105,0,-127.536	0/1:72:45,27:45:1605:27:963:-65.3118,0,-123.064	1/1:53:0,53:0:0:53:1889:-170.286,-15.9546,0	1/1:102:0,102:0:0:102:3640:-327.803,-30.7051,0
chr08	147356	.	T	C	34173.1	PASS	AB=0.528477;ABP=29.6001;AC=41;AF=0.218085;AN=188;AO=2012;CIGAR=1X;DP=9213;DPB=9213;DPRA=1.1494;EPP=4372.01;EPPR=15624.6;GTI=0;LEN=1;MEANALT=1.04;MQM=59.8951;MQMR=59.9904;NS=94;NUMALT=1;ODDS=7.83473;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71795;QR=256420;RO=7198;RPL=2012;RPP=4372.01;RPPR=15633.3;RPR=0;RUN=1;SAF=0;SAP=4372.01;SAR=2012;SRF=1;SRP=15624.6;SRR=7197;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:16,31:16:568:31:1100:-85.1619,0,-37.3035	0/0:149:149,0:149:5281:0:0:0,-44.8535,-475.422	0/1:95:49,46:49:1760:46:1648:-120.006,0,-130.086	0/1:223:114,109:114:4058:109:3901:-284.152,0,-298.22	0/1:114:61,53:61:2162:53:1904:-137.306,0,-160.526	0/1:78:37,41:37:1313:41:1450:-107.314,0,-94.9894	0/0:113:113,0:113:4022:0:0:0,-34.0164,-362.167	0/0:220:219,0:219:7823:0:0:0,-65.9256,-703.883	0/0:105:104,1:104:3729:1:36:0,-28.0099,-332.21	0/0:125:125,0:125:4420:0:0:0,-37.6287,-397.97	0/1:45:18,27:18:648:27:938:-71.1829,0,-45.1055	0/0:63:62,1:62:2217:1:36:0,-15.3666,-196.194	0/0:58:58,0:58:2080:0:0:0,-17.4597,-187.47	0/1:63:28,35:28:1008:35:1247:-93.5692,0,-72.0715	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.328	0/0:48:48,0:48:1693:0:0:0,-14.4494,-152.654	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.541	0/0:45:45,0:45:1605:0:0:0,-13.5463,-144.738	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:136:136,0:136:4828:0:0:0,-40.9401,-434.672	0/0:135:135,0:135:4777:0:0:0,-40.639,-430.083	0/1:138:42,96:42:1493:96:3418:-266.285,0,-93.1204	0/0:79:79,0:79:2746:0:0:0,-23.7814,-247.376	0/1:158:87,70:87:3105:70:2493:-176.996,0,-232.054	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.278	0/0:324:323,1:323:11419:1:21:0,-95.4338,-1025.49	0/1:214:99,115:99:3556:115:4097:-304.491,0,-255.827	0/1:31:14,17:14:504:17:612:-46.0815,0,-36.3662	0/0:294:293,1:293:10460:1:36:0,-84.9045,-937.716	0/0:211:208,3:208:7355:3:104:0,-53.8145,-652.294	0/1:139:68,71:68:2391:71:2529:-186.012,0,-173.6	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/0:9:9,0:9:294:0:0:0,-2.70927,-26.7756	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:167:166,1:166:5968:1:36:0,-46.6737,-533.625	0/1:245:113,132:113:4056:132:4705:-349.853,0,-291.474	0/1:47:20,27:20:705:27:949:-71.5744,0,-49.6244	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:135:72,63:72:2592:63:2264:-163.383,0,-192.886	0/1:18:8,10:8:288:10:360:-27.3258,0,-20.8489	0/0:134:134,0:134:4755:0:0:0,-40.338,-428.107	0/0:61:61,0:61:2162:0:0:0,-18.3628,-194.843	0/0:66:66,0:66:2357:0:0:0,-19.868,-212.387	0/1:94:43,51:43:1514:51:1810:-134.881,0,-108.252	0/1:158:65,93:65:2325:93:3271:-247.042,0,-161.945	0/1:193:99,94:99:3481:94:3372:-245.597,0,-255.398	0/0:128:128,0:128:4558:0:0:0,-38.5318,-410.385	0/0:179:179,0:179:6394:0:0:0,-53.8844,-575.547	0/0:122:122,0:122:4365:0:0:0,-36.7257,-393.023	0/1:15:8,7:8:288:7:252:-18.5135,0,-21.752	0/1:145:72,73:72:2584:73:2590:-189.688,0,-189.159	0/0:21:21,0:21:741:0:0:0,-6.32163,-67.0116	0/1:20:11,9:11:377:9:324:-23.4853,0,-28.2373	0/0:119:119,0:119:4238:0:0:0,-35.8226,-381.598	0/1:36:17,18:17:612:18:644:-47.3948,0,-44.5176	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/1:36:17,19:17:612:19:684:-51.0532,0,-44.5764	0/1:95:54,41:54:1936:41:1448:-102.015,0,-145.915	0/1:66:30,36:30:1076:36:1292:-96.702,0,-77.2849	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:196:88,108:88:3145:108:3880:-290.335,0,-224.272	0/0:239:239,0:239:8531:0:0:0,-71.9462,-767.787	0/0:79:73,6:73:2609:6:216:0,-3.99086,-215.266	0/0:104:104,0:104:3729:0:0:0,-31.3071,-335.808	0/0:165:165,0:165:5837:0:0:0,-49.6699,-525.441	0/1:95:25,70:25:885:70:2508:-197.374,0,-51.3687	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:75:74,1:74:2633:1:36:0,-18.979,-233.616	0/1:88:49,39:49:1752:39:1404:-100.169,0,-131.473	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:108:108,0:108:3861:0:0:0,-32.5112,-347.684	0/1:70:34,36:34:1175:36:1296:-95.8718,0,-84.976	0/0:163:163,0:163:5803:0:0:0,-49.0679,-522.382	0/0:178:178,0:178:6332:0:0:0,-53.5833,-569.969	0/0:152:152,0:152:5434:0:0:0,-45.7566,-489.186	0/0:118:118,0:118:4191:0:0:0,-35.5215,-377.368	0/1:12:6,6:6:216:6:216:-16.1735,0,-16.1782	0/1:139:72,67:72:2592:67:2389:-173.409,0,-191.685	0/1:116:53,63:53:1878:63:2260:-168.739,0,-134.375	0/0:202:202,0:202:7237:0:0:0,-60.8081,-651.374	0/1:95:49,46:49:1734:46:1656:-120.731,0,-127.743	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/1:97:42,55:42:1512:55:1967:-148.094,0,-107.175	0/0:125:123,2:123:4393:2:72:0,-30.792,-388.649	0/0:34:34,0:34:1186:0:0:0,-10.235,-107.041	0/1:55:32,23:32:1152:23:824:-57.9267,0,-87.4335	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/1:18:8,10:8:288:10:356:-26.9627,0,-20.8489	0/1:65:34,31:34:1212:31:1104:-80.0429,0,-89.819	0/1:62:16,46:16:576:46:1644:-129.58,0,-33.5111	0/0:126:126,0:126:4460:0:0:0,-37.9298,-401.568	0/0:73:73,0:73:2616:0:0:0,-21.9752,-235.687
chr08	183122	.	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chr08	300005	.	C	T	212078	PASS	AB=0.500636;ABP=3.02688;AC=152;AF=0.808511;AN=188;AO=9561;CIGAR=1X;DP=11933;DPB=11933;DPRA=0;EPP=19837;EPPR=4843.37;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.978;MQMR=59.9827;NS=94;NUMALT=1;ODDS=4.13423;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=342604;QR=84571;RO=2367;RPL=9453;RPP=19837;RPPR=4843.37;RPR=108;RUN=1;SAF=9561;SAP=20764.5;SAR=0;SRF=2367;SRP=5142.89;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:13,11:13:464:11:396:-28.758,0,-34.8728	1/1:178:0,178:0:0:178:6373:-573.655,-53.5833,0	0/1:432:201,231:201:7198:231:8304:-617.319,0,-517.828	0/1:298:144,154:144:5155:154:5516:-406.859,0,-374.383	0/1:87:45,42:45:1612:42:1512:-110.185,0,-119.18	0/1:68:40,28:40:1432:28:1008:-70.564,0,-108.705	1/1:129:0,129:0:0:129:4632:-417.041,-38.8329,0	1/1:217:0,217:0:0:217:7772:-699.51,-65.3235,0	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	1/1:89:0,89:0:0:89:3192:-287.503,-26.7917,0	1/1:74:0,74:0:0:74:2636:-237.485,-22.2762,0	1/1:93:0,93:0:0:93:3336:-300.457,-27.9958,0	1/1:70:0,70:0:0:70:2520:-227.051,-21.0721,0	1/1:75:0,75:0:0:75:2668:-240.365,-22.5773,0	1/1:61:0,61:0:0:61:2168:-195.384,-18.3628,0	1/1:52:0,52:0:0:52:1849:-166.688,-15.6536,0	1/1:113:0,113:0:0:113:4060:-365.586,-34.0164,0	1/1:70:0,70:0:0:70:2516:-226.692,-21.0721,0	1/1:54:0,54:0:0:54:1936:-174.516,-16.2556,0	1/1:304:0,304:0:0:304:10914:-982.149,-91.5131,0	1/1:163:0,163:0:0:163:5814:-523.373,-49.0679,0	0/1:257:183,74:183:6550:74:2664:-162.64,0,-512.216	1/1:150:0,150:0:0:150:5383:-484.591,-45.1545,0	0/1:61:28,33:28:996:33:1184:-88.5055,0,-71.5921	1/1:60:0,60:0:0:60:2151:-193.857,-18.0618,0	1/1:437:2,435:2:72:435:15582:-1395.24,-124.713,0	0/1:233:106,127:106:3812:127:4545:-339.075,0,-273.133	1/1:40:0,40:0:0:40:1436:-129.538,-12.0412,0	1/1:417:2,415:2:72:415:14880:-1332.09,-118.693,0	1/1:196:1,195:1:36:195:7004:-626.817,-55.4036,0	0/1:161:77,84:77:2755:84:3007:-222.395,0,-199.668	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:250:0,250:0:0:250:8966:-806.917,-75.2575,0	0/1:248:120,128:120:4289:128:4589:-338.517,0,-311.531	0/1:93:35,58:35:1237:58:2075:-159.024,0,-83.6365	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:132:61,71:61:2179:71:2548:-189.834,0,-156.64	0/1:50:22,28:22:783:28:1008:-75.9849,0,-55.7414	1/1:214:0,214:0:0:214:7635:-686.989,-64.4204,0	1/1:106:0,106:0:0:106:3766:-339.138,-31.9092,0	1/1:72:0,72:0:0:72:2567:-231.28,-21.6742,0	0/1:91:36,55:36:1292:55:1968:-150.001,0,-89.19	0/1:186:85,101:85:3037:101:3628:-270.73,0,-217.567	0/1:311:149,162:149:5331:162:5819:-430.199,0,-386.303	1/1:100:0,100:0:0:100:3581:-322.495,-30.103,0	1/1:209:2,207:2:72:207:7401:-659.293,-56.0785,0	1/1:155:0,155:0:0:155:5557:-500.251,-46.6597,0	0/1:21:6,15:6:208:15:540:-42.6149,0,-12.7375	0/1:194:78,116:78:2793:116:4154:-315.641,0,-193.208	1/1:48:0,48:0:0:48:1696:-152.923,-14.4494,0	0/1:11:5,6:5:176:6:216:-16.4792,0,-12.8737	1/1:223:0,223:0:0:223:7968:-717.141,-67.1297,0	0/1:45:23,22:23:805:22:788:-57.6984,0,-59.2212	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	0/1:20:13,7:13:446:7:252:-17.0084,0,-34.4448	1/1:117:0,117:0:0:117:4163:-374.816,-35.2205,0	0/1:133:69,64:69:2459:64:2296:-166.864,0,-181.527	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:323:152,169:152:5424:169:6065:-449.033,0,-391.373	1/1:278:0,278:0:0:278:9963:-896.598,-83.6863,0	1/1:68:2,66:2:72:66:2372:-206.901,-13.6333,0	1/1:180:0,180:0:0:180:6464:-581.815,-54.1854,0	1/1:187:1,186:1:36:186:6668:-596.597,-52.6943,0	0/1:121:82,38:82:2939:38:1364:-86.5773,0,-228.26	1/1:36:0,36:0:0:36:1296:-116.943,-10.8371,0	1/1:84:0,84:0:0:84:3008:-270.951,-25.2865,0	0/1:91:35,56:35:1241:56:2007:-153.509,0,-84.5988	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	1/1:95:0,95:0:0:95:3412:-307.293,-28.5979,0	0/1:79:35,43:35:1252:43:1548:-115.773,0,-89.145	1/1:136:0,136:0:0:136:4860:-437.554,-40.9401,0	1/1:236:0,236:0:0:236:8470:-762.298,-71.0431,0	1/1:215:0,214:0:0:214:7624:-685.828,-64.4204,0	1/1:168:5,163:5:176:163:5836:-509.16,-34.388,0	0/1:11:8,3:8:284:3:108:-6.76384,0,-22.592	0/1:141:78,63:78:2788:63:2263:-161.487,0,-208.716	0/1:199:91,108:91:3259:108:3842:-286.066,0,-233.623	1/1:172:1,171:1:36:171:6144:-549.458,-48.1789,0	0/1:105:57,48:57:2009:48:1728:-124.197,0,-149.471	1/1:102:0,102:0:0:102:3664:-329.963,-30.7051,0	0/1:117:68,49:68:2418:49:1748:-122.384,0,-182.655	1/1:154:0,154:0:0:154:5531:-497.912,-46.3586,0	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	0/1:84:41,43:41:1472:43:1544:-113.967,0,-107.49	1/1:93:0,93:0:0:93:3344:-301.176,-27.9958,0	0/1:56:29,27:29:1040:27:968:-70.5788,0,-77.0567	0/1:126:66,60:66:2352:60:2156:-156.377,0,-174.01	0/1:98:64,34:64:2296:34:1224:-80.9661,0,-177.4	1/1:151:0,151:0:0:151:5424:-488.287,-45.4555,0	1/1:123:0,123:0:0:123:4424:-398.329,-37.0267,0
chr08	329306	.	G	T	139021	PASS	AB=0.53246;ABP=78.4295;AC=44;AF=0.234043;AN=188;AO=5841;CIGAR=1X;DP=20896;DPB=20896;DPRA=2.31894;EPP=1971.35;EPPR=2291.13;GTI=3;LEN=1;MEANALT=1.07692;MQM=59.9795;MQMR=59.9978;NS=94;NUMALT=1;ODDS=2.79687;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=209145;QR=538253;RO=15048;RPL=1770;RPP=1971.35;RPPR=2291.13;RPR=4071;RUN=1;SAF=0;SAP=12686.6;SAR=5841;SRF=0;SRP=32679.3;SRR=15048;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:10,41:10:356:41:1472:-117.424,0,-17.0287	0/0:161:161,0:161:5764:0:0:0,-48.4658,-518.875	0/1:145:41,104:41:1476:104:3732:-292.431,0,-89.4868	0/1:205:70,135:70:2511:135:4837:-373.771,0,-164.53	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:13:1,12:1:36:12:432:-35.6229,-0.315115,0	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.634	0/0:105:105,0:105:3743:0:0:0,-31.6081,-337.071	0/0:147:147,0:147:5276:0:0:0,-44.2514,-474.974	0/0:73:72,1:72:2588:1:36:0,-18.3769,-229.57	0/0:132:132,0:132:4717:0:0:0,-39.736,-424.688	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.161	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/0:35:35,0:35:1242:0:0:0,-10.536,-112.083	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.278	0/0:23:23,0:23:805:0:0:0,-6.92369,-72.7675	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:72:72,0:72:2584:0:0:0,-21.6742,-232.809	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.592	0/0:130:130,0:130:4680:0:0:0,-39.1339,-421.358	1/1:77:5,72:5:180:72:2584:-216.257,-6.62725,0	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.072	0/1:133:66,67:66:2354:67:2408:-176.939,0,-172.081	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/0:332:332,0:332:11879:0:0:0,-99.942,-1068.97	0/1:225:107,118:107:3819:118:4213:-311.618,0,-276.176	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:227:227,0:227:8128:0:0:0,-68.3338,-731.536	0/0:385:371,14:371:13276:14:504:0,-70.1985,-1148.94	0/1:63:18,45:18:640:45:1576:-123.162,0,-38.9644	1/1:527:7,520:7:252:520:18611:-1651.53,-135.614,0	0/0:1296:1293,3:1293:46212:3:108:0,-380.06,-4147.42	1/1:612:1,611:1:36:611:21834:-1960.89,-180.632,0	0/0:1806:1806,0:1806:64500:0:0:0,-543.66,-5802.65	0/0:1344:1336,5:1336:47783:5:172:0,-388.211,-4283	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.311	0/1:88:15,73:15:527:73:2612:-208.837,0,-21.2695	0/1:239:104,135:104:3708:135:4851:-364.792,0,-261.974	0/0:316:315,1:315:11285:1:36:0,-91.5272,-1011.93	0/1:84:24,60:24:860:60:2142:-167.761,0,-52.4353	0/1:82:10,72:10:360:72:2584:-208.124,0,-8.05984	0/0:106:105,1:105:3748:1:36:0,-28.3109,-333.923	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:114:58,56:58:2062:56:2003:-146.225,0,-151.532	0/1:87:14,73:14:504:73:2620:-209.858,0,-19.5085	0/1:218:114,104:114:4054:104:3711:-268.566,0,-299.424	0/0:106:106,0:106:3804:0:0:0,-31.9092,-342.557	0/0:97:97,0:97:3473:0:0:0,-29.1999,-312.78	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/1:1115:554,561:554:19819:561:20026:-1465.71,0,-1447.58	0/1:109:26,83:26:932:83:2961:-233.91,0,-51.3866	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/1:678:337,340:337:12078:340:12177:-891.576,0,-882.709	0/0:101:101,0:101:3619:0:0:0,-30.404,-325.915	0/1:35:7,28:7:252:28:1008:-80.5003,0,-12.4929	0/0:563:562,1:562:20087:1:36:0,-165.882,-1803.75	0/1:1083:565,517:565:20242:517:18523:-1340.57,0,-1495.21	0/0:90:89,1:89:3161:1:36:0,-23.4944,-281.117	0/1:62:37,25:37:1328:25:900:-62.6572,0,-101.158	0/0:550:548,2:548:19584:2:72:0,-158.73,-1755.26	0/1:135:122,13:122:4376:13:468:-1.8206,0,-353.374	0/0:133:132,1:132:4731:1:36:0,-36.4387,-422.349	0/1:60:53,7:53:1904:7:252:-4.96716,0,-153.576	0/0:68:68,0:68:2428:0:0:0,-20.47,-218.776	0/0:234:234,0:234:8376:0:0:0,-70.441,-753.846	0/1:129:16,113:16:576:113:4064:-327.112,0,-13.3421	0/0:253:252,1:252:9035:1:36:0,-72.5623,-809.527	0/0:46:46,0:46:1644:0:0:0,-13.8474,-148.249	0/1:39:24,15:24:864:15:536:-36.8346,0,-66.3424	0/0:273:272,1:272:9738:1:36:0,-78.5829,-872.768	0/0:176:175,0:175:6284:0:0:0,-52.6802,-565.291	0/1:77:47,30:47:1684:30:1068:-73.2528,0,-128.668	0/0:234:234,0:234:8311:0:0:0,-70.441,-747.872	0/0:174:172,2:172:6168:2:72:0,-45.5425,-548.38	0/0:121:121,0:121:4334:0:0:0,-36.4246,-390.234	0/0:91:91,0:91:3256:0:0:0,-27.3937,-293.261	0/1:1889:927,962:927:33141:962:34485:-2533.89,0,-2413.01	0/1:130:74,56:74:2640:56:2004:-141.5,0,-198.713	0/1:79:21,58:21:747:58:2046:-160.628,0,-43.7729	0/0:257:256,1:256:9132:1:36:0,-73.7664,-818.258	0/1:44:24,20:24:852:20:720:-51.8835,0,-63.7551	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:24:7,17:7:252:17:608:-47.8273,0,-15.8042	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.972	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:51:16,35:16:576:35:1260:-98.353,0,-36.8225	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	1/1:185:12,173:12:432:173:6209:-519.681,-16.4694,0	0/1:708:323,384:323:11543:384:13808:-1029.3,0,-825.551	0/1:60:19,41:19:684:41:1472:-114.714,0,-43.8285	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/0:39:39,0:39:1385:0:0:0,-11.7402,-124.947
chr08	400178	.	A	T	118070	PASS	AB=0.461058;ABP=51.5482;AC=146;AF=0.776596;AN=188;AO=5626;CIGAR=1X;DP=8279;DPB=8279;DPRA=8.08211;EPP=12219.7;EPPR=5763.93;GTI=6;LEN=1;MEANALT=1;MQM=60;MQMR=59.9789;NS=94;NUMALT=1;ODDS=1.42624;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=201065;QR=94223;RO=2653;RPL=32;RPP=11943.3;RPPR=5677.4;RPR=5594;RUN=1;SAF=5594;SAP=11943.3;SAR=32;SRF=2643;SRP=5677.4;SRR=10;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:32,5:32:1148:5:176:-5.04691,0,-92.4917	1/1:48:0,48:0:0:48:1712:-154.366,-14.4494,0	0/1:85:68,17:68:2444:17:612:-29.8259,0,-194.627	0/1:79:38,41:38:1364:41:1460:-107.915,0,-99.2793	0/1:14:11,3:11:396:3:108:-5.86075,0,-31.7683	0/1:11:7,4:7:248:4:144:-10.0023,0,-19.3529	1/1:41:0,41:0:0:41:1464:-132.056,-12.3422,0	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	1/1:82:0,82:0:0:82:2940:-264.834,-24.6845,0	1/1:53:1,52:1:36:52:1860:-164.081,-12.3563,0	1/1:122:0,122:0:0:122:4353:-391.944,-36.7257,0	1/1:67:0,67:0:0:67:2388:-215.178,-20.169,0	1/1:33:2,31:2:72:31:1104:-92.8339,-3.09727,0	1/1:30:1,29:1:36:29:1028:-89.2348,-5.43263,0	1/1:44:2,42:2:72:42:1504:-128.818,-6.4086,0	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:91:3,88:3:108:88:3144:-273.111,-17.3186,0	1/1:54:0,54:0:0:54:1940:-174.876,-16.2556,0	1/1:77:0,77:0:0:77:2752:-247.922,-23.1793,0	0/1:28:24,4:24:845:4:144:-4.88478,0,-67.9383	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	0/1:20:7,13:7:252:13:468:-36.439,0,-17.0084	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	0/1:126:66,60:66:2357:60:2121:-153.228,0,-174.457	0/1:78:35,43:35:1252:43:1544:-115.773,0,-89.5047	1/1:18:1,17:1:36:17:612:-51.8152,-1.82027,0	1/1:44:0,44:0:0:44:1572:-141.772,-13.2453,0	1/1:129:4,125:4:144:125:4422:-384.84,-25.5193,0	0/1:24:18,6:18:644:6:216:-12.5658,0,-51.0659	0/0:312:306,6:306:10846:6:216:0,-74.1308,-956.098	1/1:117:2,115:2:72:115:4120:-364.147,-28.3838,0	0/0:136:134,2:134:4722:2:72:0,-34.1034,-418.307	1/1:187:0,187:0:0:187:6665:-599.93,-56.2926,0	1/1:159:0,159:0:0:159:5680:-511.32,-47.8638,0	1/1:122:3,119:3:108:119:4249:-372.515,-26.6505,0	0/1:51:34,17:34:1212:17:608:-39.6995,0,-94.0338	0/1:209:101,108:101:3569:108:3876:-286.119,0,-258.505	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	0/1:82:51,31:51:1832:31:1112:-75.7069,0,-140.476	0/1:93:75,18:75:2582:18:648:-30.6561,0,-204.627	1/1:47:0,47:0:0:47:1684:-151.847,-14.1484,0	1/1:37:1,36:1:36:36:1283:-112.174,-7.53984,0	1/1:38:0,38:0:0:38:1352:-121.98,-11.4391,0	0/1:83:41,42:41:1460:42:1508:-111.029,0,-106.711	0/1:43:31,12:31:1116:12:432:-26.2769,0,-87.8074	0/1:85:45,40:45:1593:40:1436:-103.95,0,-118.071	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	1/1:55:0,55:0:0:55:1968:-177.395,-16.5567,0	1/1:33:0,33:0:0:33:1172:-105.787,-9.93399,0	0/1:386:230,156:230:8171:156:5561:-384.417,0,-619.21	0/1:60:43,17:43:1521:17:612:-37.3516,0,-119.119	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:333:172,161:172:6003:161:5744:-416.836,0,-440.121	1/1:54:0,54:0:0:54:1936:-174.516,-16.2556,0	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	1/1:193:2,191:2:72:191:6781:-603.532,-51.2621,0	0/1:448:244,204:244:8744:204:7281:-520.481,0,-651.958	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	0/1:54:27,27:27:972:27:964:-70.8212,0,-71.5423	1/1:280:2,278:2:72:278:9948:-888.423,-77.4517,0	1/1:76:6,70:6:216:70:2508:-206.182,-3.08777,0	1/1:83:0,83:0:0:83:2972:-267.713,-24.9855,0	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	1/1:90:1,89:1:36:89:3180:-282.826,-23.4944,0	0/0:78:72,6:72:2569:6:216:0,-3.68983,-211.668	1/1:315:4,311:4:144:311:11128:-988.097,-81.5108,0	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	0/1:39:18,21:18:644:21:748:-55.9051,0,-46.5504	1/1:159:3,156:3:108:156:5596:-493.686,-37.7886,0	1/1:46:1,45:1:36:45:1600:-140.692,-10.2491,0	0/1:71:41,30:41:1472:30:1076:-75.7797,0,-111.403	1/1:45:0,45:0:0:45:1604:-144.65,-13.5464,0	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:53:1,52:1:36:52:1843:-162.551,-12.3563,0	0/1:397:151,246:151:5323:246:8836:-675.713,0,-359.699	0/1:75:47,28:47:1676:28:996:-67.3776,0,-128.55	0/1:53:33,20:33:1180:20:712:-48.4521,0,-90.5535	1/1:96:0,96:0:0:96:3421:-308.103,-28.8989,0	0/1:29:16,13:16:561:13:468:-33.7298,0,-42.0873	1/1:35:1,34:1:36:34:1216:-106.148,-6.93778,0	0/1:35:17,18:17:608:18:648:-48.1158,0,-44.516	1/1:80:0,80:0:0:80:2860:-257.638,-24.0824,0	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	0/1:44:20,24:20:716:24:864:-64.8372,0,-51.5224	1/1:59:1,58:1:36:58:2068:-182.793,-14.1625,0	0/0:110:100,10:100:3539:10:360:0,-0.368997,-285.972	0/1:461:210,251:210:7498:251:8980:-669.406,0,-536.086	0/1:52:33,19:33:1168:19:665:-44.5192,0,-89.7737	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	1/1:75:2,73:2:72:73:2620:-229.211,-15.7405,0
chr08	458658	.	T	C	114788	PASS	AB=0.51312;ABP=7.11267;AC=151;AF=0.803191;AN=188;AO=5444;CIGAR=1X;DP=6795;DPB=6795;DPRA=0;EPP=11824.5;EPPR=2927.98;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9871;MQMR=59.9777;NS=94;NUMALT=1;ODDS=1.00649;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=192056;QR=48110;RO=1347;RPL=5444;RPP=11824.5;RPPR=2927.98;RPR=0;RUN=1;SAF=5444;SAP=11824.5;SAR=0;SRF=1347;SRP=2927.98;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:16,16:16:572:16:572:-42.1805,0,-42.1805	1/1:69:0,69:0:0:69:2459:-221.564,-20.7711,0	0/1:109:54,54:54:1920:54:1892:-137.832,0,-140.353	0/1:148:79,69:79:2818:69:2460:-177.102,0,-209.306	0/1:41:11,30:11:378:30:1063:-83.6386,0,-22.0069	0/1:37:14,23:14:504:23:813:-62.351,0,-34.56	1/1:64:0,64:0:0:64:2259:-203.571,-19.2659,0	1/1:89:0,89:0:0:89:3153:-283.995,-26.7917,0	1/1:98:0,97:0:0:97:3459:-311.311,-29.1999,0	1/1:103:0,103:0:0:103:3610:-325.106,-31.0061,0	1/1:44:0,44:0:0:44:1563:-140.961,-13.2453,0	1/1:34:0,34:0:0:34:1195:-107.855,-10.235,0	1/1:43:0,43:0:0:43:1536:-138.533,-12.9443,0	1/1:69:0,69:0:0:69:2412:-217.337,-20.7711,0	1/1:42:0,42:0:0:42:1450:-130.791,-12.6433,0	1/1:40:0,40:0:0:40:1413:-127.46,-12.0412,0	1/1:47:0,47:0:0:47:1668:-150.407,-14.1484,0	1/1:41:0,41:0:0:41:1435:-129.442,-12.3422,0	1/1:17:0,17:0:0:17:586:-53.0628,-5.11751,0	1/1:139:0,139:0:0:139:4882:-439.488,-41.8432,0	1/1:74:0,74:0:0:74:2613:-235.418,-22.2762,0	0/1:96:53,43:53:1877:43:1536:-109.634,0,-140.308	1/1:44:0,44:0:0:44:1561:-140.78,-13.2453,0	0/1:103:32,71:32:1143:71:2530:-196.944,0,-72.1726	1/1:81:0,81:0:0:81:2867:-258.266,-24.3834,0	0/1:225:94,131:94:3354:131:4640:-350.034,0,-234.344	0/1:133:61,72:61:2184:72:2567:-191.243,0,-156.789	1/1:21:0,21:0:0:21:748:-67.6453,-6.32163,0	1/1:214:0,214:0:0:214:7535:-678.199,-64.4204,0	1/1:115:5,110:5:180:110:3904:-334.873,-18.0664,0	0/1:55:33,22:33:1184:22:788:-54.6881,0,-90.3117	0/1:7:4,3:4:144:3:104:-7.5956,0,-11.2064	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	0/1:7:2,5:2:68:5:161:-12.6993,0,-4.3505	1/1:7:0,7:0:0:7:235:-21.4779,-2.10721,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:112:1,111:1:36:111:3912:-348.676,-30.1171,0	0/1:173:83,90:83:2976:90:3173:-233.718,0,-215.367	0/1:28:7,21:7:252:21:726:-57.2296,0,-14.6001	1/1:4:0,4:0:0:4:129:-11.9277,-1.20412,0	0/1:107:51,56:51:1828:56:1961:-144.551,0,-132.591	0/1:9:4,5:4:144:5:176:-13.4757,0,-10.6043	1/1:116:0,116:0:0:116:4083:-367.657,-34.9195,0	1/1:35:0,35:0:0:35:1227:-110.733,-10.5361,0	1/1:29:0,29:0:0:29:1001:-90.3978,-8.72987,0	0/1:75:34,41:34:1216:41:1423:-105.784,0,-87.1693	0/1:74:32,42:32:1144:42:1488:-111.936,0,-80.9933	0/1:149:69,80:69:2447:80:2823:-209.455,0,-175.632	1/1:124:0,124:0:0:124:4408:-396.892,-37.3277,0	1/1:89:0,88:0:0:88:3110:-279.766,-26.4906,0	1/1:120:0,120:0:0:120:4208:-378.905,-36.1236,0	0/1:11:2,9:2:68:9:324:-26.1945,0,-3.14638	0/1:127:63,64:63:2249:64:2248:-164.351,0,-164.441	1/1:38:0,38:0:0:38:1334:-120.357,-11.4391,0	0/1:11:10,1:10:360:1:36:-0.286945,0,-29.433	1/1:76:0,76:0:0:76:2615:-235.592,-22.8783,0	0/1:36:17,19:17:612:19:668:-49.6086,0,-44.5764	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:32:15,17:15:540:17:608:-45.4191,0,-39.3036	1/1:73:1,72:1:36:72:2534:-224.712,-18.3769,0	0/1:79:31,48:31:1099:48:1700:-129.505,0,-75.4381	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:128:54,74:54:1910:74:2607:-196.345,0,-133.644	1/1:270:0,270:0:0:270:9514:-856.227,-81.2781,0	1/1:61:0,61:0:0:61:2160:-194.665,-18.3628,0	1/1:56:0,56:0:0:56:1975:-178.024,-16.8577,0	1/1:97:0,97:0:0:97:3420:-308.015,-29.1999,0	0/1:199:145,54:145:5208:54:1886:-110.11,0,-408.952	1/1:13:0,13:0:0:13:460:-41.7354,-3.91339,0	1/1:74:0,74:0:0:74:2602:-234.427,-22.2762,0	1/1:92:0,92:0:0:92:3235:-291.373,-27.6948,0	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	1/1:99:1,98:1:36:98:3431:-305.407,-26.2037,0	0/1:42:32,10:32:1152:10:356:-19.738,0,-91.3469	1/1:170:0,170:0:0:170:6030:-542.807,-51.1751,0	1/1:105:0,105:0:0:105:3752:-337.881,-31.6082,0	1/1:83:0,83:0:0:83:2921:-263.126,-24.9855,0	1/1:88:1,87:1:36:87:3061:-272.123,-22.8924,0	0/1:28:23,5:23:820:5:172:-7.38913,0,-65.6937	0/1:100:39,61:39:1400:61:2127:-161.591,0,-96.1962	0/1:101:51,50:51:1824:50:1754:-127.736,0,-134.037	1/1:136:2,133:2:72:133:4710:-417.223,-34.1622,0	0/1:59:16,43:16:572:43:1531:-120.322,0,-34.0527	1/1:51:0,51:0:0:51:1824:-164.441,-15.3525,0	0/1:27:10,17:10:360:17:600:-46.2014,0,-24.6165	1/1:101:0,101:0:0:101:3587:-323.039,-30.404,0	1/1:36:0,36:0:0:36:1246:-112.438,-10.8371,0	0/1:54:27,27:27:968:27:968:-71.1817,0,-71.1817	1/1:47:0,47:0:0:47:1633:-147.253,-14.1484,0	0/1:20:11,9:11:388:9:311:-22.3031,0,-29.2368	0/1:49:31,18:31:1108:18:644:-43.5401,0,-85.2805	0/1:33:25,8:25:896:8:276:-15.2413,0,-71.0264	1/1:61:1,60:1:27:60:2107:-187.197,-15.663,0	1/1:54:0,54:0:0:54:1928:-173.797,-16.2556,0
chr08	627634	.	GCTG	GCTC,ACTC	276923	PASS	AB=0.394788,0.600434;ABP=445.774,406.477;AC=150,38;AF=0.797872,0.202128;AN=188;AO=7790,2794;CIGAR=3M1X,1X2M1X;DP=10632;DPB=10633.2;DPRA=23.0913,1.49862;EPP=7862.71,3979.62;EPPR=11.6962;GTI=5;LEN=1,4;MEANALT=1.96739,2.47917;MQM=59.9823,59.9535;MQMR=60;NS=94;NUMALT=2;ODDS=1.19768;PAIRED=0,0;PAIREDR=0;PAO=0,5;PQA=0,172;PQR=0;PRO=0;QA=278117,97177;QR=134;RO=4;RPL=1243,1670;RPP=7844.96,234.703;RPPR=11.6962;RPR=6547,1124;RUN=1,1;SAF=3,1404;SAP=16892.7,3.16263;SAR=7787,1390;SRF=0;SRP=11.6962;SRR=4;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:66:0,38,28:0:0:38,28:1360,943:-187.663,-76.747,-65.3079,-111.261,0,-102.832	1/1:79:0,79,0:0:0:79,0:2836,0:-255.478,-23.7814,0,-255.478,-23.7814,-255.478	1/2:195:0,89,105:0:0:89,105:3183,3605:-552.353,-292.803,-266.011,-259.65,0,-228.042	1/2:270:0,126,142:0:0:126,142:4507,4930:-768.359,-400.867,-362.937,-367.598,0,-324.851	1/2:78:0,9,69:0:0:9,69:324,2419:-223.632,-197.194,-194.485,-26.7966,0,-6.02551	1/2:83:0,27,56:0:0:27,56:972,1942:-237.51,-158.195,-150.067,-79.6701,0,-62.8124	1/1:144:0,144,0:0:0:144,0:5163,0:-464.809,-43.3483,0,-464.809,-43.3483,-464.809	1/1:144:0,143,0:0:0:143,0:5129,0:-461.389,-43.0473,0,-461.389,-43.0473,-461.389	1/1:121:0,120,0:0:0:120,0:4291,0:-386.007,-36.1236,0,-386.007,-36.1236,-386.007	1/1:94:0,94,0:0:0:94,0:3357,0:-302.345,-28.2968,0,-302.345,-28.2968,-302.345	1/1:87:0,87,0:0:0:87,0:3064,0:-275.988,-26.1896,0,-275.988,-26.1896,-275.988	1/1:109:0,109,0:0:0:109,0:3859,0:-347.502,-32.8123,0,-347.502,-32.8123,-347.502	1/1:62:0,62,0:0:0:62,0:2211,0:-199.254,-18.6639,0,-199.254,-18.6639,-199.254	1/1:78:0,78,0:0:0:78,0:2762,0:-248.818,-23.4803,0,-248.818,-23.4803,-248.818	1/1:62:0,62,0:0:0:62,0:2205,0:-198.713,-18.6639,0,-198.713,-18.6639,-198.713	1/1:73:0,73,0:0:0:73,0:2624,0:-236.407,-21.9752,0,-236.407,-21.9752,-236.407	1/1:36:0,36,0:0:0:36,0:1257,0:-113.43,-10.8371,0,-113.43,-10.8371,-113.43	1/1:24:0,24,0:0:0:24,0:864,0:-78.0826,-7.22472,0,-78.0826,-7.22472,-78.0826	1/1:43:0,42,0:0:0:42,0:1480,0:-133.304,-12.6433,0,-133.304,-12.6433,-133.304	1/1:143:0,140,0:0:0:140,0:4973,0:-447.397,-42.1442,0,-447.397,-42.1442,-447.397	1/1:154:0,154,0:0:0:154,0:5483,0:-493.593,-46.3586,0,-493.593,-46.3586,-493.593	1/2:95:0,40,55:0:0:40,55:1424,1917:-272.311,-156.247,-144.206,-116.416,0,-99.8596	1/1:151:1,148,1:1:36:148,1:5291,36:-472.776,-41.5901,0,-470.14,-41.5901,-472.776	1/2:103:0,25,76:0:0:25,76:877,2637:-285.738,-214.368,-206.842,-71.388,0,-48.5097	1/1:101:0,101,0:0:0:101,0:3598,0:-324.026,-30.404,0,-324.026,-30.404,-324.026	1/2:385:0,158,224:0:0:158,224:5676,7764:-1094.11,-631.066,-583.504,-463.076,0,-395.646	1/2:279:0,116,162:0:0:116,162:4151,5646:-797.682,-459.183,-424.263,-338.533,0,-289.766	1/1:22:0,22,0:0:0:22,0:788,0:-71.2448,-6.62266,0,-71.2448,-6.62266,-71.2448	1/1:342:0,341,0:0:0:341,0:12216,0:-1099.03,-102.651,0,-1099.03,-102.651,-1099.03	1/1:166:0,161,4:0:0:161,4:5751,144:-517.347,-48.4658,0,-505.597,-36.7162,-504.393	1/2:230:1,99,129:1:36:99,129:3548,4483:-650.579,-361.518,-334.654,-286.418,0,-250.523	2/2:6:0,0,6:0:0:0,6:0,214:-19.6078,-19.6078,-19.6078,-1.80618,-1.80618,0	1/1:26:0,26,0:0:0:26,0:932,0:-84.1989,-7.82678,0,-84.1989,-7.82678,-84.1989	2/2:4:0,0,4:0:0:0,4:0,143:-13.2214,-13.2214,-13.2214,-1.20412,-1.20412,0	1/1:17:0,17,0:0:0:17,0:608,0:-55.052,-5.11751,0,-55.052,-5.11751,-55.052	1/1:15:0,15,0:0:0:15,0:527,0:-47.7602,-4.51545,0,-47.7602,-4.51545,-47.7602	1/1:182:0,181,0:0:0:181,0:6449,0:-580.188,-54.4864,0,-580.188,-54.4864,-580.188	1/2:112:0,66,46:0:0:66,46:2368,1601:-323.687,-130.529,-110.661,-193.51,0,-179.663	1/2:131:0,24,106:0:0:24,106:864,3717:-372.939,-302.439,-295.215,-70.5076,0,-38.5984	1/1:5:0,5,0:0:0:5,0:176,0:-16.185,-1.50515,0,-16.185,-1.50515,-16.185	1/2:154:0,69,85:0:0:69,85:2476,2939:-441.128,-239.159,-218.388,-202.322,0,-176.735	1/2:60:0,16,44:0:0:16,44:567,1542:-172.017,-125.826,-121.009,-46.5442,0,-33.2989	1/1:175:0,174,1:0:0:174,1:6220,29:-559.588,-52.3792,0,-557.28,-49.7806,-556.979	1/1:69:0,69,0:0:0:69,0:2462,0:-221.834,-20.7711,0,-221.834,-20.7711,-221.834	1/1:53:0,53,0:0:0:53,0:1866,0:-168.218,-15.9546,0,-168.218,-15.9546,-168.218	1/2:128:0,62,66:0:0:62,66:2206,2327:-369.609,-189.822,-171.159,-180.141,0,-160.273	1/2:177:0,63,113:0:0:63,113:2240,3887:-498.204,-315.657,-296.692,-182.539,0,-148.523	1/2:183:0,78,104:0:0:78,104:2791,3612:-521.257,-293.661,-270.18,-227.625,0,-196.318	1/1:119:0,118,1:0:0:118,1:4212,36:-378.9,-35.5215,0,-375.963,-32.2243,-375.662	1/1:134:0,133,0:0:0:133,0:4731,0:-425.701,-40.037,0,-425.701,-40.037,-425.701	1/1:88:0,87,0:0:0:87,0:3117,0:-280.504,-26.1896,0,-280.504,-26.1896,-280.504	1/2:15:0,6,9:0:0:6,9:212,297:-41.6165,-24.3418,-22.5356,-17.6186,0,-14.9093	1/2:199:0,97,101:0:0:97,101:3459,3555:-571.36,-289.392,-260.192,-281.963,0,-251.559	1/1:142:0,140,1:0:0:140,1:5015,28:-451.254,-42.1442,0,-449.036,-39.8855,-448.735	1/2:11:0,6,5:0:0:6,5:216,179:-32.5808,-14.9552,-13.1491,-17.9843,0,-16.4792	1/2:168:0,88,80:0:0:88,80:3107,2750:-476.679,-223.661,-197.17,-253.367,0,-229.284	1/2:67:0,16,47:0:0:16,47:559,1637:-178.608,-133.136,-128.319,-45.4874,0,-31.339	1/1:10:0,10,0:0:0:10,0:360,0:-32.7443,-3.0103,0,-32.7443,-3.0103,-32.7443	1/2:26:0,11,15:0:0:11,15:392,527:-75.1997,-43.2451,-39.9338,-32.3087,0,-27.7933	1/1:87:0,85,0:0:0:85,0:3039,0:-273.496,-25.5876,0,-273.496,-25.5876,-273.496	1/1:106:0,105,1:0:0:105,1:3738,36:-336.261,-31.6082,0,-333.324,-28.3109,-333.023	1/1:8:0,8,0:0:0:8,0:284,0:-25.9034,-2.40824,0,-25.9034,-2.40824,-25.9034	1/2:188:0,95,93:0:0:95,93:3398,3232:-540.194,-263.11,-234.512,-277.437,0,-249.441	1/1:188:1,185,2:1:26:185,2:6618,72:-593.032,-53.685,0,-587.458,-49.7492,-588.894	1/1:99:0,98,0:0:0:98,0:3524,0:-317.008,-29.5009,0,-317.008,-29.5009,-317.008	1/1:91:0,91,0:0:0:91,0:3268,0:-294.34,-27.3937,0,-294.34,-27.3937,-294.34	1/1:226:0,223,2:0:0:223,2:7944,67:-714.648,-67.1297,0,-709.222,-61.7069,-708.62	1/2:149:0,83,66:0:0:83,66:2971,2288:-428.598,-186.313,-161.327,-242.637,0,-222.769	1/1:53:0,53,0:0:0:53,0:1891,0:-170.468,-15.9546,0,-170.468,-15.9546,-170.468	1/1:157:0,156,0:0:0:156,0:5581,0:-502.051,-46.9607,0,-502.051,-46.9607,-502.051	1/1:44:0,44,0:0:0:44,0:1580,0:-142.492,-13.2453,0,-142.492,-13.2453,-142.492	1/1:31:0,31,0:0:0:31,0:1108,0:-100.031,-9.33193,0,-100.031,-9.33193,-100.031	1/1:159:0,159,0:0:0:159,0:5681,0:-511.409,-47.8638,0,-511.409,-47.8638,-511.409	1/2:107:0,44,63:0:0:44,63:1563,2234:-309.091,-182.001,-168.756,-127.085,0,-108.12	1/1:244:0,243,1:0:0:243,1:8720,36:-784.428,-73.1503,0,-781.491,-69.853,-781.19	1/1:177:0,176,0:0:0:176,0:6241,0:-561.548,-52.9813,0,-561.548,-52.9813,-561.548	1/1:104:0,103,0:0:0:103,0:3674,0:-330.503,-31.0061,0,-330.503,-31.0061,-330.503	1/1:115:1,111,3:1:36:111,3:3938,107:-350.999,-30.4761,0,-342.577,-24.6943,-344.611	1/2:14:0,7,7:0:0:7,7:252,247:-41.0315,-20.466,-18.3588,-20.9217,0,-18.8145	1/1:108:0,107,1:0:0:107,1:3797,36:-341.568,-32.2102,0,-338.631,-28.913,-338.33	1/2:138:0,64,73:0:0:64,73:2288,2530:-392.156,-205.593,-186.327,-186.556,0,-164.581	1/1:143:0,142,0:0:0:142,0:5070,0:-456.195,-42.7463,0,-456.195,-42.7463,-456.195	1/2:159:0,34,125:0:0:34,125:1209,4378:-455.083,-356.558,-346.323,-98.8791,0,-61.2504	1/1:61:0,61,0:0:0:61,0:2196,0:-197.905,-18.3628,0,-197.905,-18.3628,-197.905	1/2:96:0,15,81:0:0:15,81:536,2850:-276.059,-232.356,-227.841,-44.0594,0,-19.6759	1/1:130:0,128,1:0:0:128,1:4596,36:-413.497,-38.5318,0,-410.56,-35.5395,-410.259	1/1:20:0,20,0:0:0:20,0:720,0:-65.1288,-6.0206,0,-65.1288,-6.0206,-65.1288	1/2:89:0,21,68:0:0:21,68:743,2385:-254.948,-194.43,-188.108,-60.8717,0,-40.4017	1/1:161:0,160,0:0:0:160,0:5700,0:-512.757,-48.1648,0,-512.757,-48.1648,-512.757	1/2:97:0,31,66:0:0:31,66:1116,2335:-281.604,-190.542,-181.21,-91.4198,0,-71.5518	1/2:210:0,79,129:0:0:79,129:2799,4494:-593.555,-365.54,-341.758,-228.1,0,-189.267	1/2:143:0,16,127:0:0:16,127:567,4328:-397.67,-351.478,-346.662,-46.5442,0,-8.31344	1/1:152:0,152,0:0:0:152,0:5433,0:-489.098,-45.7566,0,-489.098,-45.7566,-489.098	1/1:83:0,83,0:0:0:83,0:2978,0:-268.252,-24.9855,0,-268.252,-24.9855,-268.252
chr08	743902	.	T	G	48874.2	PASS	AB=0.475798;ABP=26.4497;AC=36;AF=0.191489;AN=188;AO=2210;CIGAR=1X;DP=13035;DPB=13035;DPRA=1.00983;EPP=287.408;EPPR=780.434;GTI=1;LEN=1;MEANALT=1.08889;MQM=59.991;MQMR=59.9928;NS=94;NUMALT=1;ODDS=2.53134;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78566;QR=387475;RO=10818;RPL=2192;RPP=4646.89;RPPR=22429.3;RPR=18;RUN=1;SAF=818;SAP=326.742;SAR=1392;SRF=4301;SRP=988.715;SRR=6517;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:16:8,8:8:288:8:288:-21.4509,0,-21.4509	0/0:168:168,0:168:6040:0:0:0,-50.573,-543.699	0/1:101:60,41:60:2156:41:1456:-100.932,0,-163.903	0/1:314:158,155:158:5647:155:5499:-400.457,0,-413.769	0/1:116:72,44:72:2588:44:1554:-105.231,0,-198.249	0/1:64:31,33:31:1112:33:1162:-85.6194,0,-81.1254	0/0:194:194,0:194:6925:0:0:0,-58.3998,-623.317	0/0:233:233,0:233:8328:0:0:0,-70.14,-749.527	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.217	0/0:210:210,0:210:7531:0:0:0,-63.2163,-677.828	0/0:110:110,0:110:3940:0:0:0,-33.1133,-354.792	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/0:131:131,0:131:4712:0:0:0,-39.4349,-424.237	0/0:89:89,0:89:3175:0:0:0,-26.7917,-285.974	0/0:120:120,0:120:4300:0:0:0,-36.1236,-387.177	0/0:92:92,0:92:3300:0:0:0,-27.6948,-297.218	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/0:164:164,0:164:5867:0:0:0,-49.3689,-528.141	0/0:242:242,0:242:8672:0:0:0,-72.8493,-780.469	0/1:55:19,36:19:684:36:1266:-97.6845,0,-45.3337	0/0:163:163,0:163:5860:0:0:0,-49.0679,-527.508	0/1:210:130,80:130:4672:80:2811:-190.013,0,-357.423	0/0:114:112,2:112:4008:2:72:0,-27.4807,-354.073	0/1:444:233,211:233:8328:211:7508:-542.109,0,-615.869	0/1:383:226,157:226:8108:157:5609:-389.637,0,-614.44	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/0:345:345,0:345:12360:0:0:0,-103.855,-1112.24	0/0:219:212,7:212:7600:7:248:0,-43.2647,-661.376	0/1:162:86,76:86:3061:76:2714:-195.735,0,-226.952	0/1:16:6,10:6:212:10:352:-27.2017,0,-14.6083	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:331:331,0:331:11815:0:0:0,-99.6409,-1063.21	0/1:209:122,87:122:4372:87:3124:-218.47,0,-330.738	0/1:88:48,40:48:1719:40:1413:-100.975,0,-128.504	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:182:110,72:110:3924:72:2576:-177.302,0,-298.567	0/1:50:29,21:29:1044:21:752:-52.9548,0,-79.2233	0/0:195:195,0:195:6992:0:0:0,-58.7008,-629.342	0/0:129:129,0:129:4611:0:0:0,-38.8329,-415.154	0/0:100:100,0:100:3587:0:0:0,-30.103,-323.036	0/1:190:110,80:110:3916:80:2819:-196.753,0,-295.437	0/1:95:48,46:48:1720:46:1626:-118.03,0,-126.488	0/1:242:130,111:130:4656:111:3951:-283.024,0,-346.442	0/0:135:134,0:134:4795:0:0:0,-40.338,-431.346	0/0:204:204,0:204:7315:0:0:0,-61.4101,-658.398	0/0:201:200,0:200:7139:0:0:0,-60.206,-642.207	0/1:12:5,7:5:180:7:252:-19.4166,0,-12.9397	0/1:121:66,55:66:2368:55:1957:-139.98,0,-176.953	0/0:103:103,0:103:3679:0:0:0,-31.0061,-331.313	0/1:23:8,15:8:273:15:528:-40.9277,0,-17.9765	0/1:222:111,111:111:3988:111:3949:-288.774,0,-292.28	0/1:80:33,47:33:1184:47:1654:-125.064,0,-82.7797	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:11:7,4:7:248:4:144:-10.0023,0,-19.3529	0/0:171:171,0:171:6104:0:0:0,-51.4761,-549.463	0/0:179:179,0:179:6412:0:0:0,-53.8844,-577.168	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:187:91,96:91:3263:96:3388:-248.844,0,-237.597	0/0:334:333,1:333:11944:1:36:0,-96.9457,-1071.21	0/0:156:156,0:156:5580:0:0:0,-46.9607,-502.324	0/0:134:133,1:133:4772:1:36:0,-36.7397,-426.038	0/0:225:223,2:223:7958:2:72:0,-60.895,-709.406	0/1:121:55,66:55:1972:66:2355:-175.784,0,-141.33	0/0:69:68,1:68:2436:1:21:0,-18.6711,-217.395	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.834	0/0:135:135,0:135:4838:0:0:0,-40.639,-435.572	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/0:81:81,0:81:2912:0:0:0,-24.3834,-262.315	0/1:65:28,37:28:1004:37:1307:-98.3638,0,-71.1089	0/0:372:371,0:371:13320:0:0:0,-111.682,-1198.23	0/0:247:247,0:247:8858:0:0:0,-74.3544,-797.201	0/0:152:152,0:152:5441:0:0:0,-45.7566,-489.817	0/0:116:115,1:115:4120:1:36:0,-31.3212,-367.386	0/1:25:11,14:11:396:14:504:-38.1723,0,-28.457	0/0:218:217,1:217:7764:1:36:0,-62.0263,-695.194	0/1:61:24,37:24:864:37:1315:-100.288,0,-59.7197	0/0:429:429,0:429:15378:0:0:0,-129.142,-1383.5	0/1:150:74,76:74:2656:76:2728:-200.608,0,-194.131	0/0:109:109,0:109:3892:0:0:0,-32.8123,-350.475	0/1:124:68,56:68:2448:56:2000:-142.946,0,-183.247	0/0:236:234,2:234:8353:2:72:0,-64.2064,-744.941	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:87:40,46:40:1425:46:1630:-120.739,0,-102.297	0/0:57:57,0:57:2052:0:0:0,-17.1587,-184.951	0/1:79:39,40:39:1400:40:1431:-105.305,0,-102.518	0/1:171:83,88:83:2964:88:3131:-230.532,0,-215.518	0/1:123:36,87:36:1292:87:3112:-243.28,0,-79.5571	0/0:182:182,0:182:6523:0:0:0,-54.7875,-587.152	0/0:193:193,0:193:6923:0:0:0,-58.0988,-623.134
chr08	1335658	.	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chr08	1527199	.	C	A	131320	PASS	AB=0.514563;ABP=6.42563;AC=156;AF=0.829787;AN=188;AO=4714;CIGAR=1X;DP=5639;DPB=5639;DPRA=0;EPP=5.14031;EPPR=22.2542;GTI=1;LEN=1;MEANALT=1.09574;MQM=59.9811;MQMR=59.9989;NS=94;NUMALT=1;ODDS=5.98013;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=168833;QR=32755;RO=914;RPL=2323;RPP=5.14031;RPPR=22.2542;RPR=2391;RUN=1;SAF=0;SAP=10239.3;SAR=4714;SRF=0;SRP=1987.74;SRR=914;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:13:0,13:0:0:13:449:-40.7375,-3.91339,0	1/1:38:0,38:0:0:38:1360:-122.701,-11.4391,0	0/1:79:36,43:36:1281:43:1544:-115.472,0,-91.8099	1/1:89:0,89:0:0:89:3168:-285.343,-26.7917,0	0/1:12:6,6:6:216:6:216:-16.1782,0,-16.1782	0/1:24:7,17:7:252:17:612:-48.1805,0,-15.8042	1/1:72:0,72:0:0:72:2561:-230.738,-21.6742,0	1/1:52:1,51:1:36:51:1828:-161.203,-12.0553,0	1/1:47:0,47:0:0:47:1692:-152.567,-14.1484,0	1/1:59:0,59:0:0:59:2107:-189.898,-17.7608,0	1/1:98:0,97:0:0:97:3488:-313.77,-29.1999,0	1/1:73:0,73:0:0:73:2618:-235.867,-21.9752,0	1/1:52:0,52:0:0:52:1864:-168.039,-15.6536,0	1/1:78:0,78:0:0:78:2789:-251.249,-23.4803,0	1/1:43:0,42:0:0:42:1512:-136.015,-12.6433,0	1/1:59:0,59:0:0:59:2109:-190.077,-17.7608,0	1/1:32:0,32:0:0:32:1148:-103.63,-9.63296,0	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	1/1:48:0,48:0:0:48:1728:-155.805,-14.4494,0	1/1:118:0,118:0:0:118:4211:-379.171,-35.5215,0	0/1:14:12,2:12:432:2:72:-2.6223,0,-35.0068	1/1:44:0,44:0:0:44:1567:-141.321,-13.2453,0	0/1:14:3,11:3:108:11:396:-31.7683,0,-5.86075	1/1:29:0,29:0:0:29:1028:-92.8311,-8.72987,0	0/1:102:44,58:44:1580:58:2069:-155.774,0,-111.786	0/1:81:53,28:53:1900:28:1008:-66.6529,0,-146.894	1/1:33:0,33:0:0:33:1175:-106.057,-9.93399,0	1/1:85:0,85:0:0:85:3056:-275.268,-25.5876,0	1/1:81:0,81:0:0:81:2869:-258.445,-24.3834,0	0/1:57:31,26:31:1116:26:928:-66.6795,0,-83.593	1/1:128:1,127:1:36:127:4544:-405.529,-34.9336,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:75:1,74:1:36:74:2660:-236.047,-18.979,0	1/1:99:0,99:0:0:99:3556:-320.247,-29.802,0	1/1:14:0,14:0:0:14:496:-44.9743,-4.21442,0	1/1:208:0,207:0:0:207:7412:-666.763,-62.3132,0	0/1:51:22,29:22:792:29:1044:-78.9223,0,-56.2531	0/1:64:34,30:34:1205:30:1080:-78.2473,0,-89.488	1/1:32:0,32:0:0:32:1140:-102.905,-9.63296,0	0/1:68:35,33:35:1260:33:1184:-86.3983,0,-93.2354	0/1:47:19,28:19:684:28:1008:-76.8879,0,-47.7419	0/1:51:20,31:20:712:31:1108:-84.6785,0,-49.0541	0/1:68:38,30:38:1364:30:1080:-77.0432,0,-102.591	1/1:39:0,39:0:0:39:1404:-126.659,-11.7402,0	0/1:32:14,18:14:500:18:648:-49.0189,0,-35.7032	0/1:40:22,18:22:792:18:648:-46.6107,0,-59.5645	0/1:58:28,30:28:1008:30:1080:-80.0535,0,-73.5766	1/1:47:0,47:0:0:47:1684:-151.847,-14.1484,0	1/1:61:0,61:0:0:61:2196:-197.905,-18.3628,0	1/1:52:0,52:0:0:52:1860:-167.679,-15.6536,0	1/1:84:3,81:3:108:81:2900:-251.161,-15.2114,0	0/1:38:10,28:10:360:28:1000:-78.8762,0,-21.3052	0/1:39:14,25:14:489:25:892:-68.8595,0,-32.5987	0/1:32:3,29:3:108:29:1044:-84.6418,0,-0.44221	0/1:54:24,30:24:860:30:1076:-80.8972,0,-61.4662	0/1:22:6,16:6:216:16:576:-45.5523,0,-13.1679	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	1/1:58:2,56:2:72:56:2008:-174.157,-10.623,0	1/1:47:0,47:0:0:47:1688:-152.151,-14.1484,0	1/1:86:1,85:1:36:85:3060:-272.03,-22.2903,0	1/1:30:0,30:0:0:30:1065:-96.1604,-9.0309,0	0/1:214:122,92:122:4358:92:3289:-231.808,0,-327.971	1/1:59:0,59:0:0:59:2108:-189.989,-17.7608,0	1/1:40:0,40:0:0:40:1432:-129.178,-12.0412,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:80:1,79:1:36:79:2835:-251.789,-20.4841,0	0/1:40:32,8:32:1152:8:288:-14.2262,0,-91.9489	1/1:53:0,53:0:0:53:1904:-171.638,-15.9546,0	1/1:24:0,24:0:0:24:852:-76.9991,-7.22472,0	1/1:33:0,33:0:0:33:1180:-106.508,-9.93399,0	1/1:119:0,119:0:0:119:4265:-384.027,-35.8226,0	1/1:60:0,60:0:0:60:2133:-192.236,-18.0618,0	0/1:78:38,38:38:1360:38:1360:-99.4626,0,-99.4626	1/1:73:0,72:0:0:72:2592:-233.168,-21.6742,0	1/1:87:0,86:0:0:86:3092:-278.147,-25.8886,0	1/1:48:0,48:0:0:48:1697:-153.014,-14.4494,0	1/1:95:0,95:0:0:95:3400:-306.215,-28.5979,0	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	1/1:52:0,52:0:0:52:1849:-166.688,-15.6536,0	0/1:35:20,15:20:720:15:540:-38.4005,0,-54.5927	1/1:58:1,57:1:36:57:2040:-180.274,-13.8615,0	1/1:47:0,46:0:0:46:1652:-148.609,-13.8474,0	1/1:39:0,39:0:0:39:1385:-124.946,-11.7402,0	0/1:55:27,28:27:972:28:1008:-74.4797,0,-71.2413	1/1:117:5,112:5:171:112:4009:-345.142,-19.4951,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:88:39,48:39:1395:48:1728:-129.256,0,-99.299	1/1:62:1,61:1:36:61:2179:-192.777,-15.0656,0	0/1:53:26,27:26:932:27:972:-71.8433,0,-68.2443	0/1:159:59,100:59:2120:100:3576:-274.181,0,-143.204	0/1:70:46,24:46:1656:24:864:-57.0105,0,-128.256	1/1:105:0,105:0:0:105:3776:-340.033,-31.6082,0	1/1:82:0,80:0:0:80:2867:-257.907,-24.0824,0
chr08	1540707	.	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chr08	1754279	.	ATTTAC	ATTAC	51606	PASS	AB=0.513665;ABP=12.8616;AC=36;AF=0.191489;AN=188;AO=3136;CIGAR=1M1D4M;DP=16058;DPB=15534.7;DPRA=1.20063;EPP=6812.75;EPPR=27967.2;GTI=0;LEN=1;MEANALT=1.42553;MQM=49.3141;MQMR=59.9011;NS=94;NUMALT=1;ODDS=3.93454;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110779;QR=451626;RO=12878;RPL=3136;RPP=6812.75;RPPR=27967.2;RPR=0;RUN=1;SAF=3136;SAP=6812.75;SAR=0;SRF=12878;SRP=27967.2;SRR=0;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/0:73:72,0:72:2472:0:0:0,-21.6742,-222.422	0/0:96:96,0:96:3350:0:0:0,-28.8989,-301.722	0/1:64:39,25:39:1354:25:891:-60.7758,0,-102.784	0/0:388:388,0:388:13562:0:0:0,-116.8,-1220.39	0/1:127:63,64:63:2207:64:2257:-163.546,0,-160.664	0/1:187:89,96:89:3148:96:3407:-249.194,0,-227.499	0/0:326:323,0:323:11347:0:0:0,-97.2327,-1020.83	0/0:543:540,0:540:18951:0:0:0,-162.556,-1704.84	0/0:171:169,2:169:5924:2:72:0,-44.6618,-526.466	0/0:421:420,1:420:14678:1:36:0,-123.435,-1317.44	0/0:55:55,0:55:1945:0:0:0,-16.5566,-175.328	0/0:95:95,0:95:3313:0:0:0,-28.5978,-298.396	0/0:111:111,0:111:3941:0:0:0,-33.4143,-354.887	0/0:122:120,0:120:4237:0:0:0,-36.1236,-381.259	0/0:108:108,0:108:3782:0:0:0,-32.5112,-340.567	0/0:69:69,0:69:2419:0:0:0,-20.7711,-217.926	0/0:88:88,0:88:3105:0:0:0,-26.4906,-279.679	0/0:141:141,0:141:4976:0:0:0,-42.4452,-447.997	0/0:46:45,0:45:1595:0:0:0,-13.5463,-143.481	0/0:397:397,0:397:13983:0:0:0,-119.509,-1258.26	0/0:277:277,0:277:9660:0:0:0,-83.3853,-869.385	0/1:170:75,95:75:2590:95:3373:-250.407,0,-182.176	0/0:143:141,1:141:4909:1:32:0,-39.8491,-438.807	0/1:138:109,28:109:3810:28:996:-47.7585,0,-301.525	0/0:114:113,0:113:3993:0:0:0,-34.0164,-359.207	0/1:641:264,375:264:9220:375:13235:-989.953,0,-637.096	0/1:314:187,126:187:6587:126:4419:-300.8,0,-498.378	0/0:55:55,0:55:1933:0:0:0,-16.5566,-174.247	0/0:561:560,0:560:19580:0:0:0,-168.577,-1761.2	0/0:131:131,0:131:4590:0:0:0,-39.4349,-413.273	0/1:204:112,92:112:3926:92:3210:-226.073,0,-292.132	0/1:22:9,12:9:321:12:424:-31.7583,0,-22.6422	0/0:38:38,0:38:1352:0:0:0,-11.4391,-121.981	0/1:24:17,7:17:602:7:237:-14.1496,0,-47.2858	0/0:21:21,0:21:722:0:0:0,-6.32163,-65.2974	0/0:22:22,0:22:781:0:0:0,-6.62266,-70.613	0/0:296:295,0:295:10332:0:0:0,-88.8038,-929.472	0/1:503:233,270:233:8225:270:9619:-709.505,0,-588.846	0/1:84:37,47:37:1306:47:1663:-123.437,0,-92.5191	0/0:9:9,0:9:317:0:0:0,-2.70927,-28.8701	0/1:274:100,173:100:3533:173:6137:-467.199,0,-235.791	0/1:37:25,12:25:881:12:413:-26.2216,0,-68.4702	0/1:171:102,69:102:3570:69:2452:-167.895,0,-270.036	0/1:150:68,82:68:2380:82:2919:-215.846,0,-169.304	0/0:117:117,0:117:4068:0:0:0,-35.2205,-366.308	0/1:228:114,114:114:3978:114:3990:-287.879,0,-289.56	0/1:159:99,60:99:3473:60:2089:-139.643,0,-264.913	0/1:418:171,246:171:6006:246:8689:-650.235,0,-414.781	0/0:173:171,2:171:6033:2:72:0,-45.2785,-536.194	0/0:276:274,1:274:9671:1:36:0,-79.5384,-866.802	0/0:382:381,0:381:13339:0:0:0,-114.692,-1200.04	0/1:6:5,1:5:168:1:36:-1.77259,0,-13.6439	0/1:123:75,48:75:2641:48:1712:-116.861,0,-200.906	0/1:141:46,95:46:1610:95:3336:-256.059,0,-102.736	0/1:23:14,9:14:490:9:320:-21.949,0,-37.5074	0/1:212:110,102:110:3823:102:3559:-255.248,0,-280.459	0/1:87:51,35:51:1784:35:1227:-83.4684,0,-134.601	0/0:14:14,0:14:494:0:0:0,-4.21442,-44.7363	0/1:37:21,16:21:737:16:546:-38.061,0,-55.5138	0/0:143:141,1:141:4938:1:36:0,-39.708,-441.14	0/0:155:155,0:155:5462:0:0:0,-46.6596,-491.718	0/0:14:14,0:14:485:0:0:0,-4.21442,-43.9769	0/1:443:198,245:198:6975:245:8711:-644.971,0,-494.462	0/0:213:212,0:212:7476:0:0:0,-63.8184,-672.626	0/0:173:173,0:173:6042:0:0:0,-52.0782,-543.68	0/0:110:109,0:109:3765:0:0:0,-32.8123,-338.757	0/0:243:239,3:239:8355:3:104:0,-63.5048,-742.309	0/1:188:57,130:57:2018:130:4656:-360.123,0,-125.273	0/0:24:23,0:23:808:0:0:0,-6.92369,-72.5292	0/0:104:103,0:103:3631:0:0:0,-31.0061,-326.638	0/0:181:181,0:181:6393:0:0:0,-54.4864,-575.466	0/0:46:45,0:45:1595:0:0:0,-13.5463,-143.54	0/0:174:174,0:174:6019:0:0:0,-52.3792,-541.776	0/1:91:42,49:42:1484:49:1722:-127.398,0,-106.461	0/0:267:266,0:266:9289:0:0:0,-80.074,-835.643	0/0:225:224,1:224:7932:1:36:0,-64.153,-710.282	0/0:234:233,0:233:8187:0:0:0,-70.14,-736.514	0/0:274:271,2:271:9466:2:72:0,-75.9373,-845.282	0/1:25:18,7:18:635:7:243:-14.6157,0,-49.9525	0/0:173:172,1:172:6034:1:36:0,-48.4951,-539.526	0/1:222:108,114:108:3780:114:4053:-296.797,0,-273.578	0/0:445:442,1:442:15541:1:32:0,-130.688,-1395.21	0/0:146:146,0:146:5131:0:0:0,-43.9504,-461.936	0/0:77:76,0:76:2658:0:0:0,-22.8783,-239.054	0/1:176:87,88:87:3068:88:3129:-226.594,0,-223.31	0/0:218:218,0:218:7646:0:0:0,-65.6245,-688.199	0/0:56:56,0:56:1962:0:0:0,-16.8577,-176.856	0/1:118:60,57:60:2084:57:1960:-140.354,0,-152.25	0/0:112:112,0:112:3928:0:0:0,-33.7154,-353.719	0/1:40:22,18:22:772:18:625:-44.3179,0,-57.7605	0/1:128:79,49:79:2766:49:1715:-114.61,0,-210.652	0/1:99:34,64:34:1160:64:2245:-170.974,0,-74.8394	0/0:153:152,0:152:5326:0:0:0,-45.7566,-479.278	0/0:145:145,0:145:5091:0:0:0,-43.6493,-458.345
chr08	1768943	.	T	C	415050	PASS	AB=0.471357;ABP=51.524;AC=152;AF=0.808511;AN=188;AO=15374;CIGAR=1X;DP=19034;DPB=19034;DPRA=0;EPP=33265.7;EPPR=7896.33;GTI=0;LEN=1;MEANALT=1.1383;MQM=59.9852;MQMR=59.9964;NS=94;NUMALT=1;ODDS=3.0541;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=537204;QR=127028;RO=3647;RPL=7602;RPP=7.09223;RPPR=5.84506;RPR=7772;RUN=1;SAF=7592;SAP=8.10918;SAR=7782;SRF=1857;SRP=5.68311;SRR=1790;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:83:0,83:0:0:83:2867:-258.268,-24.9855,0	1/1:296:2,294:2:72:294:10282:-918.49,-82.2682,0	0/1:193:81,112:81:2845:112:3851:-288.694,0,-198.191	1/1:651:3,648:3:108:648:22652:-2028.04,-185.895,0	0/1:118:65,53:65:2251:53:1829:-129.365,0,-167.331	0/1:106:50,56:50:1710:56:1937:-142.696,0,-122.272	1/1:363:1,361:1:36:361:12634:-1133.33,-105.764,0	1/1:581:0,580:0:0:580:20451:-1839.9,-174.597,0	1/1:279:0,279:0:0:279:9741:-876.645,-83.9874,0	1/1:307:0,307:0:0:307:10719:-964.64,-92.4162,0	1/1:87:0,87:0:0:87:2995:-269.781,-26.1896,0	1/1:154:0,154:0:0:154:5365:-482.99,-46.3586,0	1/1:119:0,119:0:0:119:4179:-376.297,-35.8226,0	1/1:88:0,88:0:0:88:3042:-274.005,-26.4906,0	1/1:126:2,124:2:72:124:4308:-381.063,-31.0931,0	1/1:100:1,99:1:32:99:3484:-310.518,-26.9037,0	1/1:82:1,81:1:27:81:2830:-252.239,-21.9847,0	1/1:90:1,89:1:36:89:3142:-279.409,-23.4944,0	1/1:66:0,66:0:0:66:2311:-208.249,-19.868,0	1/1:384:0,384:0:0:384:13456:-1210.85,-115.596,0	1/1:353:0,353:0:0:353:12238:-1101.3,-106.264,0	0/1:118:71,47:71:2444:47:1653:-113.534,0,-184.693	1/1:209:2,207:2:72:207:7177:-639.151,-56.0785,0	0/1:296:149,146:149:5195:146:5138:-373.4,0,-378.537	1/1:164:2,161:2:59:161:5627:-500.931,-43.802,0	0/1:705:340,365:340:11831:365:12859:-944.92,0,-852.459	0/1:467:240,227:240:8419:227:7949:-574.865,0,-617.152	1/1:64:1,63:1:36:63:2221:-196.554,-15.6676,0	1/1:667:2,665:2:72:665:23165:-2077.46,-193.95,0	1/1:327:14,313:14:496:313:10972:-942.419,-53.4625,0	0/1:288:138,150:138:4813:150:5271:-387.834,0,-346.639	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:40:0,40:0:0:40:1401:-126.38,-12.0412,0	0/1:34:4,30:4:144:30:1080:-87.2782,0,-3.0786	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	1/1:20:0,20:0:0:20:687:-62.1465,-6.0206,0	1/1:347:1,346:1:36:346:12105:-1085.73,-100.859,0	0/1:312:167,145:167:5837:145:5089:-364.239,0,-431.532	0/1:119:58,61:58:1941:61:2111:-154.432,0,-139.133	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:292:151,141:151:5216:141:4904:-353.618,0,-381.69	0/1:65:34,31:34:1182:31:1102:-79.9236,0,-87.1161	0/1:202:104,98:104:3561:98:3380:-243.608,0,-259.898	0/1:112:70,42:70:2427:42:1490:-100.678,0,-184.971	1/1:111:1,110:1:27:110:3834:-342.56,-30.7145,0	0/1:252:147,105:147:5135:105:3698:-257.165,0,-386.439	0/1:210:95,114:95:3283:114:4025:-299.316,0,-232.567	0/1:301:171,129:171:5985:129:4541:-318.339,0,-448.247	1/1:222:0,222:0:0:222:7713:-694.223,-66.8287,0	1/1:309:0,308:0:0:308:10778:-969.584,-92.7172,0	1/1:302:0,302:0:0:302:10491:-944.136,-90.9111,0	0/1:18:15,3:15:521:3:108:-4.65663,0,-41.7978	0/1:228:130,98:130:4539:98:3439:-241.088,0,-340.049	0/1:172:105,67:105:3605:67:2377:-162.41,0,-272.886	0/1:35:14,21:14:491:21:728:-55.3017,0,-33.9851	0/1:307:166,141:166:5788:141:4933:-351.71,0,-428.633	0/1:216:118,98:118:4145:98:3401:-241.195,0,-308.217	1/1:15:0,15:0:0:15:532:-48.2131,-4.51545,0	0/1:34:21,13:21:740:13:464:-31.8625,0,-56.6883	1/1:185:0,185:0:0:185:6447:-580.329,-55.6906,0	1/1:161:1,160:1:36:160:5585:-499.185,-44.8676,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:414:217,196:217:7584:196:6931:-499.177,0,-557.929	1/1:338:2,335:2:63:335:11664:-1043.67,-95.7822,0	1/1:191:0,191:0:0:191:6625:-596.343,-57.4967,0	1/1:201:0,201:0:0:201:6957:-626.214,-60.507,0	1/1:334:5,329:5:172:329:11501:-1019.17,-84.726,0	0/1:187:124,63:124:4379:63:2229:-144.581,0,-337.994	1/1:30:0,30:0:0:30:1048:-94.6273,-9.0309,0	1/1:219:1,218:1:36:218:7635:-683.593,-62.3273,0	1/1:140:0,140:0:0:140:4873:-438.729,-42.1442,0	1/1:43:0,43:0:0:43:1484:-133.85,-12.9443,0	1/1:235:2,233:2:68:233:8107:-723.209,-64.2843,0	0/1:141:94,46:94:3301:46:1621:-103.712,0,-254.848	1/1:402:1,401:1:36:401:13963:-1252.88,-117.416,0	1/1:336:0,336:0:0:336:11818:-1063.5,-101.146,0	1/1:157:0,157:0:0:157:5556:-500.167,-47.2617,0	1/1:209:1,207:1:36:207:7273:-651.035,-59.3758,0	0/1:21:7,14:7:252:14:500:-39.0145,0,-16.7073	1/1:274:2,271:2:68:271:9569:-854.716,-76.0767,0	0/1:287:152,135:152:5251:135:4723:-338.84,0,-386.346	1/1:566:2,563:2:72:563:19656:-1761.83,-163.512,0	1/1:175:0,175:0:0:175:6092:-548.389,-52.6803,0	1/1:106:0,106:0:0:106:3686:-331.944,-31.9092,0	0/1:139:74,65:74:2593:65:2253:-161.187,0,-191.777	1/1:233:1,232:1:36:232:8080:-723.636,-66.5417,0	1/1:67:0,67:0:0:67:2383:-214.728,-20.169,0	0/1:117:50,67:50:1775:67:2288:-170.958,0,-124.812	1/1:132:0,132:0:0:132:4615:-415.519,-39.736,0	0/1:54:27,27:27:938:27:914:-66.3102,0,-68.4762	0/1:151:74,77:74:2565:77:2639:-192.3,0,-185.644	0/1:91:66,25:66:2322:25:881:-52.2084,0,-181.847	1/1:290:0,290:0:0:290:9981:-898.262,-87.2987,0	1/1:165:1,164:1:36:164:5727:-511.956,-46.0717,0
chr08	1803373	.	TTCC	CTCT	33211.4	PASS	AB=0.536726;ABP=45.5968;AC=36;AF=0.191489;AN=188;AO=1960;CIGAR=1X2M1X;DP=8411;DPB=8411;DPRA=1.35727;EPP=4259.1;EPPR=13933;GTI=1;LEN=4;MEANALT=1.31707;MQM=59.9112;MQMR=59.9875;NS=94;NUMALT=1;ODDS=0.0349438;PAIRED=0;PAIREDR=0;PAO=1;PQA=36;PQR=0;PRO=1;QA=69668;QR=225885;RO=6419;RPL=1960;RPP=4259.1;RPPR=13941.7;RPR=0;RUN=1;SAF=0;SAP=4259.1;SAR=1960;SRF=1;SRP=13933;SRR=6418;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/0:25:25,0:25:884:0:0:0,-7.52575,-79.8781	0/0:134:134,0:134:4720:0:0:0,-40.338,-424.965	0/1:144:73,71:73:2583:71:2508:-182.625,0,-189.368	0/0:189:188,0:188:6602:0:0:0,-56.5936,-593.914	0/1:95:28,67:28:984:67:2371:-185.046,0,-60.2752	0/1:100:52,48:52:1853:48:1724:-125.343,0,-136.947	0/0:133:133,0:133:4671:0:0:0,-40.037,-420.56	0/0:116:115,0:115:4055:0:0:0,-34.6184,-364.781	0/0:43:43,0:43:1530:0:0:0,-12.9443,-137.993	0/0:86:86,0:86:3013:0:0:0,-25.8886,-271.402	0/0:25:25,0:25:890:0:0:0,-7.52575,-80.4192	0/0:29:29,0:29:1014:0:0:0,-8.72987,-91.5696	0/0:28:28,0:28:986:0:0:0,-8.42884,-89.0527	0/0:73:73,0:73:2553:0:0:0,-21.9752,-230.02	0/0:24:24,0:24:843:0:0:0,-7.22472,-76.1881	0/0:27:27,0:27:967:0:0:0,-8.12781,-87.3475	0/0:39:39,0:39:1359:0:0:0,-11.7402,-122.605	0/0:22:22,0:22:778:0:0:0,-6.62266,-70.342	0/0:18:18,0:18:632:0:0:0,-5.41854,-57.2064	0/0:213:212,0:212:7454:0:0:0,-63.8184,-670.56	0/0:106:106,0:106:3745:0:0:0,-31.9092,-337.252	0/1:163:45,117:45:1563:117:4128:-322.591,0,-91.8424	0/0:47:47,0:47:1655:0:0:0,-14.1484,-149.238	0/1:140:38,96:38:1318:96:3405:-265.942,0,-78.2227	0/0:62:62,0:62:2195:0:0:0,-18.6639,-197.815	0/1:281:153,126:153:5402:126:4480:-319.093,0,-401.74	0/1:212:102,108:102:3604:108:3845:-282.67,0,-260.994	0/0:8:8,0:8:275:0:0:0,-2.40824,-25.0833	0/0:284:284,0:284:10022:0:0:0,-85.4925,-901.934	0/0:181:177,3:177:6274:3:108:0,-44.3577,-554.723	0/1:142:75,67:75:2621:67:2393:-172.879,0,-193.394	0/1:16:8,8:8:288:8:273:-20.0537,0,-21.4509	0/0:36:36,0:36:1272:0:0:0,-10.8371,-114.782	0/1:14:6,8:6:216:8:288:-22.0521,0,-15.5761	0/0:8:8,0:8:276:0:0:0,-2.40824,-25.1742	0/0:43:43,0:43:1532:0:0:0,-12.9443,-138.174	0/0:102:102,0:102:3631:0:0:0,-30.7051,-326.996	0/1:309:167,141:167:5848:141:4981:-355.357,0,-433.367	0/1:37:15,22:15:538:22:781:-59.475,0,-37.6177	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2079	0/1:190:97,92:97:3420:92:3297:-239.69,0,-250.764	0/1:27:11,16:11:396:16:555:-42.1474,0,-27.8549	0/1:157:95,62:95:3348:62:2191:-150.166,0,-254.278	0/1:29:11,18:11:395:18:635:-48.7469,0,-27.1623	0/0:20:20,0:20:709:0:0:0,-6.0206,-64.1357	0/1:111:46,64:46:1616:64:2291:-172.978,0,-112.255	0/1:149:65,84:65:2251:84:3005:-225.828,0,-157.997	0/1:171:91,79:91:3202:79:2815:-202.056,0,-236.871	0/0:87:87,0:87:3023:0:0:0,-26.1896,-272.302	0/0:158:157,1:157:5493:1:36:0,-43.9645,-490.908	0/0:137:136,0:136:4746:0:0:0,-40.9401,-426.951	0/1:29:7,22:7:244:22:768:-60.7087,0,-13.5692	0/1:155:69,86:69:2414:86:3084:-231.128,0,-170.857	0/1:51:23,28:23:816:28:997:-74.6927,0,-58.4099	0/1:37:18,19:18:635:19:673:-49.7582,0,-46.3398	0/1:117:50,66:50:1766:66:2345:-176.03,0,-123.943	0/1:23:12,11:12:431:11:386:-28.1521,0,-32.207	0/0:20:20,0:20:676:0:0:0,-6.0206,-61.1551	0/1:33:19,14:19:668:14:489:-34.4062,0,-50.511	0/0:65:65,0:65:2298:0:0:0,-19.5669,-207.081	0/0:95:93,2:93:3282:2:72:0,-21.7611,-288.764	0/0:14:14,0:14:488:0:0:0,-4.21442,-44.2503	0/1:179:89,90:89:3133:90:3226:-236.678,0,-228.314	0/0:185:185,0:185:6501:0:0:0,-55.6905,-585.186	0/0:74:71,2:71:2505:2:72:0,-15.4983,-218.867	0/0:92:92,0:92:3245:0:0:0,-27.6948,-292.276	0/0:165:164,1:164:5756:1:36:0,-46.0717,-514.566	0/1:154:40,114:40:1404:114:4033:-316.769,0,-80.2982	0/0:9:9,0:9:317:0:0:0,-2.70927,-28.8696	0/0:83:81,0:81:2868:0:0:0,-24.3834,-258	0/0:52:52,0:52:1847:0:0:0,-15.6536,-166.51	0/0:11:11,0:11:387:0:0:0,-3.31133,-35.1668	0/0:114:112,0:112:3893:0:0:0,-33.7154,-350.283	0/1:56:18,38:18:619:38:1335:-103.591,0,-39.1731	0/0:322:321,0:321:11311:0:0:0,-96.6306,-1017.49	0/0:134:134,0:134:4690:0:0:0,-40.338,-422.269	0/0:147:146,0:146:5144:0:0:0,-43.9504,-462.896	0/0:71:71,0:71:2519:0:0:0,-21.3731,-226.963	0/1:13:4,9:4:142:9:324:-25.5925,0,-9.21582	0/0:99:98,0:98:3460:0:0:0,-29.5009,-311.254	0/1:108:55,52:55:1926:52:1844:-133.669,0,-141.046	0/0:183:183,0:183:6448:0:0:0,-55.0885,-580.419	0/0:54:54,0:54:1925:0:0:0,-16.2556,-173.527	0/0:34:34,0:34:1189:0:0:0,-10.235,-107.313	0/1:34:22,12:22:785:12:432:-28.9846,0,-60.7396	0/0:67:66,0:66:2293:0:0:0,-19.868,-206.27	0/0:20:20,0:20:706:0:0:0,-6.0206,-63.8645	0/1:36:17,19:17:605:19:684:-51.0532,0,-43.9437	0/0:42:42,0:42:1460:0:0:0,-12.6433,-131.691	0/1:35:14,21:14:492:21:754:-57.6509,0,-34.0752	0/1:56:24,32:24:849:32:1140:-86.0492,0,-59.8717	0/1:32:8,24:8:280:24:864:-68.4496,0,-15.9063	0/0:75:74,0:74:2616:0:0:0,-22.2762,-235.329	0/0:39:39,0:39:1364:0:0:0,-11.7402,-123.056
chr08	1981862	.	T	G	12774.6	PASS	AB=0.470068;ABP=17.9597;AC=28;AF=0.148936;AN=188;AO=961;CIGAR=1X;DP=10941;DPB=10941;DPRA=0.899524;EPP=2089.8;EPPR=21639.6;GTI=1;LEN=1;MEANALT=1.08333;MQM=40.7846;MQMR=57.8233;NS=94;NUMALT=1;ODDS=11.2878;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34225;QR=356875;RO=9972;RPL=961;RPP=2089.8;RPPR=21639.6;RPR=0;RUN=1;SAF=961;SAP=2089.8;SAR=0;SRF=9972;SRP=21656.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:60:60,0:60:2139:0:0:0,-18.0618,-192.733	0/1:49:33,16:33:1184:16:576:-35.7196,0,-92.1097	0/0:104:104,0:104:3706:0:0:0,-31.3071,-332.533	0/1:33:14,19:14:504:19:665:-48.3994,0,-35.6922	0/1:41:22,19:22:788:19:684:-47.5257,0,-58.1228	0/0:70:70,0:70:2512:0:0:0,-21.0721,-225.784	0/0:138:138,0:138:4916:0:0:0,-41.5421,-442.212	0/0:66:66,0:66:2364:0:0:0,-19.868,-212.962	0/0:88:88,0:88:3152:0:0:0,-26.4906,-283.707	0/0:159:158,0:158:5645:0:0:0,-47.5627,-506.991	0/0:42:42,0:42:1491:0:0:0,-12.6433,-134.46	0/0:42:42,0:42:1492:0:0:0,-12.6433,-134.571	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:24:23,0:23:820:0:0:0,-6.92369,-73.7232	0/0:35:35,0:35:1234:0:0:0,-10.536,-111.324	0/0:46:46,0:46:1639:0:0:0,-13.8474,-147.725	0/0:54:54,0:54:1927:0:0:0,-16.2556,-173.649	0/0:126:125,0:125:4440:0:0:0,-37.6287,-399.183	0/0:76:76,0:76:2732:0:0:0,-22.8783,-245.707	0/0:107:107,0:107:3836:0:0:0,-32.2102,-345.389	0/1:70:33,37:33:1180:37:1332:-95.1831,0,-85.2314	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.226	0/1:51:32,18:32:1133:18:644:-41.0524,0,-86.8357	0/0:69:69,0:69:2476:0:0:0,-20.7711,-222.986	0/1:231:114,117:114:4092:117:4212:-296.513,0,-298.227	0/1:159:97,62:97:3480:62:2220:-145.809,0,-265.332	0/0:17:17,0:17:603:0:0:0,-5.11751,-54.5995	0/0:172:172,0:172:6172:0:0:0,-51.7772,-554.883	0/0:90:89,1:89:3192:1:36:0,-23.612,-283.909	0/1:62:29,33:29:1040:33:1180:-83.6784,0,-74.9824	0/0:571:564,7:564:20204:7:252:0,-149.612,-1794.79	0/0:482:482,0:482:17232:0:0:0,-145.096,-1549.57	0/0:312:312,0:312:11157:0:0:0,-93.9214,-1003.75	0/0:992:991,0:991:35469:0:0:0,-298.321,-3189.63	0/0:376:376,0:376:13495:0:0:0,-113.187,-1213.45	0/0:98:98,0:98:3515:0:0:0,-29.5009,-315.637	0/1:110:62,48:62:2228:48:1716:-116.711,0,-167.635	0/0:133:123,10:123:4358:10:360:0,-8.36266,-360.685	0/0:249:249,0:249:8923:0:0:0,-74.9565,-802.857	0/1:57:21,36:21:756:36:1292:-93.2875,0,-50.837	0/1:70:61,9:61:2153:9:320:-7.16697,0,-172.928	0/1:70:49,21:49:1764:21:752:-44.3639,0,-137.942	0/1:42:23,19:23:824:19:680:-46.3094,0,-61.7646	0/0:38:38,0:38:1346:0:0:0,-11.4391,-121.339	0/1:115:63,52:63:2268:52:1849:-126,0,-169.342	0/1:71:55,16:55:1980:16:576:-29.097,0,-157.101	0/1:114:69,45:69:2472:45:1611:-105.556,0,-188.181	0/0:89:89,0:89:3196:0:0:0,-26.7917,-287.561	0/0:66:66,0:66:2364:0:0:0,-19.868,-212.779	0/0:99:99,0:99:3543:0:0:0,-29.802,-318.231	0/0:143:139,4:139:4992:4:144:0,-30.1687,-435.971	0/1:55:27,28:27:963:28:993:-69.2294,0,-70.1264	0/1:29:17,12:17:608:12:428:-28.928,0,-46.1639	0/0:435:421,13:421:15078:13:468:0,-89.928,-1315.18	0/1:50:24,26:24:855:26:909:-64.4112,0,-62.2187	0/1:33:16,17:16:563:17:612:-43.6687,0,-41.0334	0/0:364:364,0:364:13020:0:0:0,-109.575,-1168.6	0/0:352:349,3:349:12481:3:108:0,-96.2166,-1110.04	0/0:48:48,0:48:1715:0:0:0,-14.4494,-154.543	0/0:51:51,0:51:1832:0:0:0,-15.3525,-164.87	0/0:420:419,0:419:14995:0:0:0,-126.132,-1346.46	0/1:90:21,68:21:756:68:2412:-183.378,0,-41.1575	0/0:139:139,0:139:4988:0:0:0,-41.8432,-447.684	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.203	0/0:49:49,0:49:1755:0:0:0,-14.7505,-158.043	0/0:141:141,0:141:5039:0:0:0,-42.4452,-453.105	0/1:36:13,23:13:468:23:824:-61.261,0,-31.5919	0/0:86:86,0:86:3092:0:0:0,-25.8886,-278.286	0/0:46:46,0:46:1631:0:0:0,-13.8474,-146.997	0/0:54:54,0:54:1944:0:0:0,-16.2556,-174.621	0/0:322:322,0:322:11547:0:0:0,-96.9317,-1037.71	0/0:93:93,0:93:3310:0:0:0,-27.9958,-297.853	0/1:43:23,20:23:819:20:705:-48.7358,0,-61.0156	0/0:80:80,0:80:2856:0:0:0,-24.0824,-257.048	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.515	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.756	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.82	0/0:183:170,13:170:6095:13:464:0,-14.3178,-507.752	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.849	0/1:37:21,16:21:756:16:531:-35.4822,0,-57.2291	0/0:122:122,0:122:4375:0:0:0,-36.7257,-393.483	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.456	0/0:33:33,0:33:1141:0:0:0,-9.93399,-102.842	0/1:64:28,36:28:995:36:1262:-91.0561,0,-70.455	0/0:103:103,0:103:3699:0:0:0,-31.0061,-332.891	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.2852	0/1:50:20,30:20:720:30:1050:-76.3996,0,-50.0765	0/0:35:35,0:35:1243:0:0:0,-10.536,-112.138	0/0:92:85,7:85:3034:7:232:0,-7.153,-252.708	0/1:47:17,30:17:603:30:1046:-76.1563,0,-40.4511	0/1:42:12,30:12:428:30:1080:-81.6836,0,-26.1838	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7762	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.361
chr08	2069553	.	G	C	128340	PASS	AB=0.479323;ABP=16.8392;AC=152;AF=0.808511;AN=188;AO=7601;CIGAR=1X;DP=9555;DPB=9555;DPRA=0;EPP=16508.4;EPPR=4239.55;GTI=0;LEN=1;MEANALT=1.03191;MQM=32.3127;MQMR=45.3234;NS=94;NUMALT=1;ODDS=7.3373;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=272126;QR=69851;RO=1951;RPL=7601;RPP=16508.4;RPPR=4239.55;RPR=0;RUN=1;SAF=0;SAP=16508.4;SAR=7601;SRF=0;SRP=4239.55;SRR=1951;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:57:0,57:0:0:57:2040:-159.007,-17.1587,0	1/1:69:0,69:0:0:69:2476:-194.342,-20.7711,0	0/1:169:108,61:108:3868:61:2188:-120.615,0,-292.999	1/1:253:0,253:0:0:253:9081:-694.208,-76.1606,0	0/1:36:23,13:23:816:13:468:-26.0807,0,-61.9598	0/1:46:20,26:20:720:26:928:-56.4389,0,-50.1699	1/1:155:0,155:0:0:155:5560:-424.179,-46.6597,0	1/1:186:0,186:0:0:186:6671:-520.189,-55.9916,0	1/1:128:0,128:0:0:128:4570:-356.138,-38.5318,0	1/1:102:0,102:0:0:102:3619:-274.522,-30.7051,0	1/1:56:0,56:0:0:56:1985:-151.081,-16.8577,0	1/1:97:0,97:0:0:97:3484:-267.846,-29.1999,0	1/1:98:0,98:0:0:98:3520:-270.924,-29.5009,0	1/1:33:0,32:0:0:32:1152:-88.3053,-9.63296,0	1/1:76:0,76:0:0:76:2720:-204.919,-22.8783,0	1/1:58:0,58:0:0:58:2073:-155.629,-17.4597,0	1/1:25:0,25:0:0:25:887:-69.4265,-7.52575,0	1/1:33:0,33:0:0:33:1184:-92.2245,-9.93399,0	1/1:25:0,25:0:0:25:900:-70.9671,-7.52575,0	1/1:187:0,187:0:0:187:6672:-503.498,-56.2926,0	1/1:174:0,174:0:0:174:6240:-474.753,-52.3792,0	0/1:137:102,35:102:3641:35:1233:-55.9083,0,-282.409	1/1:125:1,124:1:36:124:4439:-333.808,-34.0802,0	0/1:27:11,16:11:396:16:568:-35.8813,0,-26.3832	1/1:145:0,145:0:0:145:5139:-392.156,-43.6494,0	0/1:289:133,156:133:4768:156:5604:-351.312,0,-334.276	0/1:294:140,154:140:5036:154:5540:-333.617,0,-357.846	1/1:31:0,31:0:0:31:1116:-85.7767,-9.33193,0	1/1:343:0,343:0:0:343:12289:-958.034,-103.253,0	1/1:132:5,127:5:176:127:4564:-332.541,-23.753,0	0/1:145:74,71:74:2652:71:2552:-151.651,0,-190.138	0/1:16:12,4:12:432:4:144:-6.48531,0,-31.6353	1/1:25:0,25:0:0:25:896:-68.2023,-7.52575,0	0/1:16:7,9:7:252:9:324:-20.7974,0,-17.9949	1/1:14:0,14:0:0:14:500:-39.5093,-4.21442,0	1/1:46:0,46:0:0:46:1637:-127.41,-13.8474,0	1/1:161:0,161:0:0:161:5758:-447.399,-48.4658,0	0/1:124:60,64:60:2156:64:2300:-136.073,0,-154.361	0/1:48:27,21:27:972:21:756:-45.2729,0,-72.4241	1/1:11:0,11:0:0:11:396:-30.5454,-3.31133,0	0/1:164:76,88:76:2712:88:3164:-193.06,0,-187.194	0/1:48:19,29:19:684:29:1044:-64.328,0,-46.1215	0/1:150:88,62:88:3156:62:2220:-124.488,0,-233.716	0/1:50:30,20:30:1072:20:716:-39.9759,0,-80.246	1/1:57:0,57:0:0:57:2036:-157.343,-17.1587,0	0/1:159:61,98:61:2188:98:3509:-226.035,0,-145.27	0/1:156:87,69:87:3090:69:2438:-143.813,0,-226.859	0/1:179:88,91:88:3126:91:3241:-195.139,0,-221.523	1/1:152:0,152:0:0:152:5449:-413.251,-45.7566,0	1/1:119:0,119:0:0:119:4261:-324.032,-35.8226,0	1/1:89:0,89:0:0:89:3173:-246.955,-26.7917,0	0/1:12:8,4:8:288:4:144:-8.1349,0,-22.2918	0/1:124:75,49:75:2685:49:1764:-101.481,0,-201.189	0/1:76:45,31:45:1605:31:1112:-61.8501,0,-120.07	0/1:13:8,5:8:288:5:180:-10.4553,0,-21.9223	0/1:174:63,111:63:2264:111:3982:-251.959,0,-146.805	0/1:49:12,37:12:432:37:1328:-87.5353,0,-23.9283	1/1:27:0,27:0:0:27:968:-76.4292,-8.12781,0	0/1:23:16,7:16:576:7:252:-12.1129,0,-44.1885	1/1:85:0,85:0:0:85:3048:-233.391,-25.5876,0	1/1:103:0,103:0:0:103:3678:-278.566,-31.0061,0	1/1:17:0,17:0:0:17:608:-46.0822,-5.11751,0	0/1:274:146,128:146:5244:128:4604:-277.937,0,-382.758	1/1:199:3,195:3:93:195:6989:-523.699,-51.3983,0	1/1:51:0,51:0:0:51:1823:-139.008,-15.3525,0	1/1:124:0,124:0:0:124:4418:-335.194,-37.3277,0	1/1:194:0,194:0:0:194:6911:-527.051,-58.3998,0	0/1:133:90,43:90:3211:43:1533:-79.1952,0,-241.776	1/1:34:0,34:0:0:34:1220:-93.6964,-10.235,0	1/1:79:0,79:0:0:79:2827:-219.819,-23.7814,0	1/1:33:0,33:0:0:33:1188:-91.8207,-9.93399,0	1/1:20:0,20:0:0:20:720:-54.8617,-6.0206,0	1/1:85:0,85:0:0:85:3025:-237.774,-25.5876,0	0/1:150:92,58:92:3284:58:2069:-114.806,0,-247.003	1/1:160:0,159:0:0:159:5680:-434.587,-47.8638,0	1/1:155:0,155:0:0:155:5553:-425.232,-46.6597,0	1/1:153:0,153:0:0:153:5475:-427.895,-46.0576,0	1/1:84:1,83:1:36:83:2969:-228.792,-21.7279,0	0/1:17:5,12:5:180:12:432:-28.5782,0,-11.2521	1/1:108:1,107:1:36:107:3837:-288.261,-28.9627,0	0/1:118:47,71:47:1684:71:2544:-163.22,0,-114.257	1/1:220:0,220:0:0:220:7857:-595.151,-66.2266,0	1/1:47:0,47:0:0:47:1688:-129.231,-14.1484,0	1/1:67:0,67:0:0:67:2408:-184.647,-20.169,0	0/1:47:23,24:23:828:24:856:-51.7168,0,-59.5927	1/1:109:1,108:1:36:108:3884:-292.59,-29.214,0	1/1:22:0,22:0:0:22:792:-62.1604,-6.62266,0	0/1:59:34,25:34:1216:25:900:-52.5126,0,-89.7325	1/1:72:0,72:0:0:72:2575:-199.224,-21.6742,0	0/1:34:15,19:15:540:19:684:-40.5505,0,-37.552	0/1:74:33,41:33:1184:41:1472:-91.036,0,-82.2636	0/1:94:61,33:61:2192:33:1188:-63.0374,0,-165.688	1/1:178:0,178:0:0:178:6381:-486.057,-53.5833,0	1/1:143:0,143:0:0:143:5136:-383.794,-43.0473,0
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chr08	2285541	.	G	C	0	PASS	AB=0.265957;ABP=4430.6;AC=37;AF=0.196809;AN=188;AO=2536;CIGAR=1X;DP=21216;DPB=21216;DPRA=1.11405;EPP=5509.86;EPPR=40546.6;GTI=36;LEN=1;MEANALT=1.02174;MQM=17.7729;MQMR=19.41;NS=94;NUMALT=1;ODDS=37.4133;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90787;QR=665243;RO=18675;RPL=0;RPP=5509.86;RPPR=40555.3;RPR=2536;RUN=1;SAF=2536;SAP=5509.86;SAR=0;SRF=18674;SRP=40546.6;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:188:148,40:148:5305:40:1432:-6.17104,0,-190.415	0/0:225:225,0:225:8009:0:0:0,-67.7317,-372.938	0/1:415:327,88:327:11657:88:3149:-8.40333,0,-413.744	0/0:413:412,1:412:14634:1:36:0,-123.227,-705.239	0/1:206:149,57:149:5296:57:2029:-25.858,0,-196.802	0/1:87:64,23:64:2304:23:805:-8.47686,0,-86.857	0/0:178:178,0:178:6279:0:0:0,-53.5833,-310.849	0/1:394:258,136:258:9193:136:4876:-95.5211,0,-314.353	0/0:327:327,0:327:11580:0:0:0,-98.4368,-564.838	0/0:177:177,0:177:6277:0:0:0,-53.2823,-296.319	0/0:119:119,0:119:4272:0:0:0,-35.8226,-195.539	0/0:240:240,0:240:8560:0:0:0,-72.2472,-404.834	0/0:188:188,0:188:6721:0:0:0,-56.5936,-324.73	0/0:82:82,0:82:2929:0:0:0,-24.6845,-137.812	0/0:183:183,0:183:6546:0:0:0,-55.0885,-302.825	0/0:112:112,0:112:4004:0:0:0,-33.7154,-194.155	0/0:63:63,0:63:2268:0:0:0,-18.9649,-107.373	0/0:69:69,0:69:2457:0:0:0,-20.7711,-121.39	0/0:56:56,0:56:2001:0:0:0,-16.8577,-96.4656	0/1:528:391,137:391:13972:137:4924:-53.2857,0,-482.285	0/1:474:343,131:343:12157:131:4696:-63.4756,0,-443.839	0/1:278:166,112:166:5900:112:4024:-90.8984,0,-203.266	0/0:323:322,1:322:11462:1:36:0,-95.538,-544.007	0/0:188:182,6:182:6513:6:216:0,-46.4809,-310.579	0/0:348:347,0:347:12331:0:0:0,-104.457,-580.179	0/1:586:441,145:441:15707:145:5192:-45.1383,0,-573.992	0/0:680:678,0:678:24227:0:0:0,-204.098,-1142.38	0/0:67:67,0:67:2382:0:0:0,-20.169,-108.817	0/1:642:515,127:515:18349:127:4564:-2.50422,0,-659.658	0/1:230:165,65:165:5905:65:2340:-32.5657,0,-202.511	0/0:213:213,0:213:7569:0:0:0,-64.1194,-353.495	0/0:16:13,3:13:468:3:108:0,-0.0713914,-17.3962	0/1:32:20,12:20:720:12:432:-8.83899,0,-25.9701	0/0:5:5,0:5:180:0:0:0,-1.50515,-10.2712	0/1:14:10,4:10:345:4:144:-3.81671,0,-14.3679	0/0:40:40,0:40:1432:0:0:0,-12.0412,-67.2784	0/1:465:367,98:367:13119:98:3501:-11.9,0,-467.26	0/1:334:270,64:270:9580:64:2287:-1.96486,0,-364.011	0/0:91:91,0:91:3268:0:0:0,-27.3937,-151.521	0/1:10:6,4:6:216:4:144:-3.26,0,-7.0322	0/0:295:295,0:295:10523:0:0:0,-88.8038,-496.771	0/0:82:82,0:82:2944:0:0:0,-24.6845,-137.422	0/0:475:475,0:475:16928:0:0:0,-142.989,-792.874	0/0:116:116,0:116:4130:0:0:0,-34.9195,-191.763	0/1:160:107,53:107:3794:53:1900:-37.2659,0,-135.459	0/1:302:207,95:207:7383:95:3385:-55.262,0,-261.265	0/0:304:304,0:304:10864:0:0:0,-91.5131,-513.009	0/0:407:407,0:407:14518:0:0:0,-122.519,-702.136	0/0:232:232,0:232:8267:0:0:0,-69.839,-396.067	0/0:268:268,0:268:9588:0:0:0,-80.676,-447.128	0/1:338:226,112:226:8048:112:3978:-76.6817,0,-281.323	0/1:19:14,5:14:492:5:180:-2.07593,0,-17.7331	0/0:388:388,0:388:13861:0:0:0,-116.8,-661.988	0/0:136:136,0:136:4831:0:0:0,-40.9401,-226.402	0/0:15:15,0:15:532:0:0:0,-4.51545,-25.3451	0/0:351:351,0:351:12521:0:0:0,-105.662,-588.167	0/0:141:141,0:141:4992:0:0:0,-42.4452,-245.524	0/0:20:17,3:17:593:3:108:0,-1.27551,-23.7685	0/1:34:25,9:25:885:9:324:-3.66131,0,-32.0637	0/0:195:195,0:195:6887:0:0:0,-58.7008,-327.953	0/1:168:133,35:133:4731:35:1252:-2.59555,0,-177.192	0/0:14:14,0:14:504:0:0:0,-4.21442,-23.7403	0/0:359:359,0:359:12786:0:0:0,-108.07,-615.22	0/1:390:298,91:298:10593:91:3272:-25.8784,0,-395.492	0/0:151:149,2:149:5318:2:72:0,-42.3296,-243.844	0/1:248:195,53:195:6936:53:1900:-10.8639,0,-257.38	0/1:373:301,72:301:10650:72:2580:-5.0529,0,-405.782	0/1:448:283,165:283:10141:165:5916:-118.926,0,-356.176	0/1:47:33,14:33:1173:14:504:-7.37396,0,-42.2078	0/1:163:122,41:122:4298:41:1476:-13.2775,0,-159.77	0/0:90:73,17:73:2620:17:612:0,-1.08429,-97.0328	0/1:53:38,15:38:1337:15:536:-7.08579,0,-45.0069	0/1:338:241,97:241:8546:97:3464:-48.2873,0,-316.273	0/1:226:163,63:163:5817:63:2260:-29.9145,0,-208.071	0/1:304:223,81:223:7886:81:2896:-33.4638,0,-293.83	0/0:512:512,0:512:18265:0:0:0,-154.127,-884.432	0/1:240:167,73:167:5917:73:2597:-41.7495,0,-202.068	0/1:260:197,63:197:7035:63:2268:-19.7056,0,-257.699	0/1:25:19,6:19:684:6:216:-1.79496,0,-25.7732	0/0:288:287,1:287:10233:1:21:0,-85.2133,-491.832	0/0:324:324,0:324:11552:0:0:0,-97.5337,-554.203	0/0:658:657,0:657:23334:0:0:0,-197.777,-1125	0/0:91:91,0:91:3227:0:0:0,-27.3937,-151.843	0/0:150:150,0:150:5365:0:0:0,-45.1545,-255.361	0/0:118:118,0:118:4195:0:0:0,-35.5215,-192.932	0/0:335:335,0:335:11949:0:0:0,-100.845,-564.919	0/0:62:62,0:62:2228:0:0:0,-18.6639,-103.407	0/0:160:133,27:133:4742:27:964:0,-7.09774,-178.359	0/0:165:165,0:165:5826:0:0:0,-49.6699,-287.557	0/0:54:54,0:54:1925:0:0:0,-16.2556,-88.2529	0/1:139:95,44:95:3362:44:1576:-28.769,0,-117.599	0/1:148:103,45:103:3689:45:1595:-25.6422,0,-122.669	0/0:315:315,0:315:11224:0:0:0,-94.8244,-544.185	0/0:236:236,0:236:8480:0:0:0,-71.0431,-407.04
chr08	2285555	.	C	T	2.86984e-12	PASS	AB=0.268852;ABP=4150.97;AC=40;AF=0.212766;AN=188;AO=2518;CIGAR=1X;DP=20975;DPB=20975;DPRA=0.992089;EPP=5418.79;EPPR=39795.7;GTI=39;LEN=1;MEANALT=1.05769;MQM=17.7724;MQMR=19.3833;NS=94;NUMALT=1;ODDS=47.0661;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90127;QR=658472;RO=18449;RPL=5;RPP=5427.43;RPPR=39804.4;RPR=2513;RUN=1;SAF=2517;SAP=5462.1;SAR=1;SRF=18448;SRP=40055.8;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:192:140,52:140:4998:52:1854:-24.6934,0,-178.415	0/1:222:150,72:150:5380:72:2582:-44.4108,0,-190.936	0/1:415:291,123:291:10368:123:4408:-67.6496,0,-352.79	0/0:411:411,0:411:14662:0:0:0,-123.723,-707.529	0/0:204:204,0:204:7268:0:0:0,-61.4101,-344.685	0/0:88:87,1:87:3112:1:36:0,-24.796,-146.109	0/0:178:178,0:178:6310:0:0:0,-53.5833,-312.223	0/0:392:333,59:333:11902:59:2120:0,-28.0326,-463.933	0/0:319:319,0:319:11391:0:0:0,-96.0286,-552.137	0/1:175:138,37:138:4909:37:1328:-5.54344,0,-184.433	0/1:114:80,34:80:2864:34:1224:-17.171,0,-101.824	0/0:238:238,0:238:8487:0:0:0,-71.6451,-402.42	0/0:188:187,0:187:6652:0:0:0,-56.2926,-321.57	0/1:84:56,28:56:2008:28:1004:-21.0209,0,-70.1536	0/1:182:131,51:131:4692:51:1836:-22.5561,0,-169.724	0/0:109:108,0:108:3859:0:0:0,-32.5112,-185.58	0/0:63:63,0:63:2230:0:0:0,-18.9649,-107.218	0/0:69:68,0:68:2444:0:0:0,-20.47,-119.917	0/1:56:45,11:45:1585:11:396:-0.0890651,0,-62.8475	0/1:519:371,148:371:13251:148:5282:-70.1072,0,-457.432	0/0:468:468,0:468:16683:0:0:0,-140.882,-782.728	0/0:280:280,0:280:10020:0:0:0,-84.2884,-464.912	0/1:319:255,64:255:9122:64:2257:-4.24125,0,-345.415	0/0:185:185,0:185:6631:0:0:0,-55.6905,-325.521	0/1:346:255,91:255:9066:91:3248:-36.2015,0,-335.56	0/0:578:578,0:578:20636:0:0:0,-173.995,-960.433	0/1:675:541,134:541:19326:134:4793:-9.43557,0,-721.021	0/1:66:46,20:46:1647:20:720:-9.72698,0,-58.1367	0/1:633:429,204:429:15281:204:7290:-130.905,0,-521.813	0/1:224:170,54:170:6088:54:1925:-15.665,0,-213.891	0/1:209:152,57:152:5444:57:2033:-27.9237,0,-194.159	0/0:17:17,0:17:612:0:0:0,-5.11751,-28.4162	0/0:32:32,0:32:1152:0:0:0,-9.63296,-53.8954	0/0:5:5,0:5:180:0:0:0,-1.50515,-10.2712	0/0:14:14,0:14:500:0:0:0,-4.21442,-26.5719	0/0:38:38,0:38:1360:0:0:0,-11.4391,-64.6791	0/1:464:322,142:322:11498:142:5096:-77.7779,0,-400.974	0/0:329:329,0:329:11704:0:0:0,-99.0389,-559.004	0/1:91:66,25:66:2363:25:900:-13.2698,0,-85.9393	0/1:10:8,2:8:284:2:72:-0.209582,0,-10.0679	0/1:285:202,81:202:7222:81:2899:-42.2623,0,-263.18	0/0:81:81,0:81:2882:0:0:0,-24.3834,-135.58	0/1:466:341,125:341:12115:125:4484:-57.5415,0,-442.186	0/1:113:81,32:81:2895:32:1152:-16.572,0,-100.949	0/0:162:162,0:162:5743:0:0:0,-48.7669,-273.74	0/0:293:292,0:292:10443:0:0:0,-87.9008,-479.619	0/1:301:218,83:218:7804:83:2969:-38.1724,0,-288.016	0/0:408:404,4:404:14417:4:144:0,-116.55,-692.723	0/0:232:232,0:232:8279:0:0:0,-69.839,-398.04	0/1:263:185,78:185:6615:78:2800:-40.4618,0,-240.338	0/0:333:333,0:333:11890:0:0:0,-100.243,-552.733	0/0:20:18,2:18:635:2:72:0,-2.80072,-26.3075	0/0:387:387,0:387:13847:0:0:0,-116.499,-663.011	0/0:136:110,26:110:3915:26:921:0,-1.59782,-149.615	0/0:14:12,2:12:428:2:72:0,-0.994538,-17.3864	0/1:350:260,90:260:9261:90:3228:-34.226,0,-341.472	0/0:140:139,1:139:4949:1:36:0,-40.4495,-241.653	0/1:20:14,6:14:504:6:208:-3.10428,0,-18.2323	0/0:34:34,0:34:1203:0:0:0,-10.235,-56.1199	0/1:192:152,40:152:5421:40:1440:-5.25151,0,-201.723	0/0:164:164,0:164:5884:0:0:0,-49.3689,-274.139	0/1:14:10,4:10:360:4:144:-1.9644,0,-13.5221	0/0:354:354,0:354:12666:0:0:0,-106.565,-608.812	0/0:382:382,0:382:13627:0:0:0,-114.993,-645.718	0/1:148:109,39:109:3876:39:1396:-16.7143,0,-139.655	0/1:244:175,69:175:6237:69:2476:-35.3571,0,-231.317	0/0:370:370,0:370:13187:0:0:0,-111.381,-629.748	0/0:443:437,6:437:15628:6:216:0,-122.564,-712.625	0/0:47:47,0:47:1676:0:0:0,-14.1484,-77.638	0/0:159:159,0:159:5669:0:0:0,-47.8638,-265.207	0/0:89:89,0:89:3171:0:0:0,-26.7917,-146.997	0/1:52:40,12:40:1431:12:421:-1.0628,0,-49.6494	0/0:340:340,0:340:12131:0:0:0,-102.35,-571.965	0/1:225:173,51:173:6187:51:1821:-11.5006,0,-225.305	0/0:297:297,0:297:10593:0:0:0,-89.4059,-500.625	0/0:501:500,1:500:17910:1:36:0,-149.121,-864.537	0/1:238:174,64:174:6150:64:2295:-28.0724,0,-213.921	0/0:261:260,1:260:9268:1:36:0,-76.8742,-431.39	0/0:25:25,0:25:900:0:0:0,-7.52575,-42.4444	0/0:290:290,0:290:10360:0:0:0,-87.2987,-498.875	0/0:316:316,0:316:11292:0:0:0,-95.1255,-541.486	0/0:644:644,0:644:22987:0:0:0,-193.863,-1105.05	0/1:89:65,24:65:2300:24:860:-9.99048,0,-85.2228	0/0:151:151,0:151:5384:0:0:0,-45.4555,-256.614	0/1:117:88,29:88:3159:29:1044:-8.28484,0,-113.215	0/1:329:244,85:244:8709:85:3041:-33.6313,0,-324.664	0/0:62:51,11:51:1819:11:396:0,-1.71711,-69.2766	0/1:159:119,40:119:4259:40:1440:-12.9564,0,-150.099	0/0:159:158,1:158:5634:1:36:0,-46.1691,-271.72	0/1:52:38,14:38:1356:14:496:-5.85442,0,-48.486	0/1:138:106,32:106:3768:32:1137:-9.8371,0,-135.099	0/1:147:91,56:91:3224:56:2007:-40.4094,0,-106.956	0/0:305:305,0:305:10912:0:0:0,-91.8141,-525.494	0/0:233:233,0:233:8321:0:0:0,-70.14,-400.792
chr08	2435271	.	T	C	423422	PASS	AB=0.480532;ABP=26.2607;AC=152;AF=0.808511;AN=188;AO=14862;CIGAR=1X;DP=18563;DPB=18563;DPRA=0;EPP=25000.3;EPPR=4918.61;GTI=0;LEN=1;MEANALT=1.10638;MQM=59.9916;MQMR=60;NS=94;NUMALT=1;ODDS=12.0783;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=529539;QR=132087;RO=3687;RPL=6414;RPP=607.486;RPPR=8.10416;RPR=8448;RUN=1;SAF=7305;SAP=12.2888;SAR=7557;SRF=2196;SRP=295.735;SRR=1491;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:104:0,104:0:0:104:3684:-331.764,-31.3071,0	1/1:238:0,238:0:0:238:8517:-766.528,-71.6451,0	0/1:423:206,217:206:7377:217:7760:-571.097,0,-536.639	1/1:256:1,254:1:36:254:9060:-811.853,-73.4493,0	0/1:126:54,72:54:1936:72:2576:-194.16,0,-136.587	0/1:149:67,82:67:2412:82:2918:-218,0,-172.482	1/1:225:0,225:0:0:225:8004:-720.386,-67.7318,0	1/1:364:0,364:0:0:364:12957:-1165.95,-109.575,0	1/1:313:0,313:0:0:313:11184:-1006.45,-94.2224,0	1/1:138:0,138:0:0:138:4955:-446.097,-41.5421,0	1/1:158:0,158:0:0:158:5664:-509.879,-47.5627,0	1/1:193:0,193:0:0:193:6870:-618.359,-58.0988,0	1/1:190:0,189:0:0:189:6748:-607.035,-56.8947,0	1/1:213:0,213:0:0:213:7577:-681.972,-64.1194,0	1/1:167:0,167:0:0:167:5980:-538.306,-50.272,0	1/1:129:0,129:0:0:129:4591:-413.355,-38.8329,0	1/1:138:0,138:0:0:138:4937:-444.48,-41.5421,0	1/1:138:0,138:0:0:138:4921:-443.041,-41.5421,0	1/1:79:0,79:0:0:79:2822:-254.218,-23.7814,0	1/1:281:1,280:1:36:280:9991:-895.531,-80.9912,0	1/1:283:0,283:0:0:283:10061:-905.431,-85.1915,0	0/1:175:94,81:94:3368:81:2908:-209.275,0,-250.656	1/1:117:0,117:0:0:117:4156:-374.225,-35.2205,0	0/1:150:45,105:45:1616:105:3763:-293.714,0,-100.576	1/1:166:0,166:0:0:166:5924:-533.269,-49.971,0	0/1:390:230,160:230:8235:160:5662:-392.301,0,-623.759	0/1:544:297,247:297:10648:247:8836:-631.467,0,-794.467	1/1:76:0,76:0:0:76:2711:-244.234,-22.8783,0	1/1:435:0,435:0:0:435:15484:-1393.28,-130.948,0	1/1:232:7,225:7:252:225:7986:-695.736,-46.81,0	0/1:218:95,123:95:3381:123:4387:-329.38,0,-238.881	0/1:26:11,15:11:396:15:532:-40.3863,0,-28.156	1/1:34:0,34:0:0:34:1207:-108.935,-10.235,0	0/1:27:18,9:18:644:9:315:-20.5594,0,-50.1628	1/1:26:0,26:0:0:26:926:-83.6577,-7.82678,0	1/1:50:0,50:0:0:50:1784:-160.843,-15.0515,0	1/1:455:0,455:0:0:455:16233:-1460.65,-136.969,0	0/1:160:74,86:74:2637:86:3057:-227.194,0,-189.411	0/1:140:62,78:62:2216:78:2783:-208.566,0,-157.561	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/1:280:132,148:132:4733:148:5295:-392.397,0,-341.837	0/1:80:42,38:42:1508:38:1368:-99.3384,0,-111.932	0/1:350:175,175:175:6288:175:6233:-455.707,0,-460.65	0/1:162:80,82:80:2876:82:2944:-216.427,0,-210.309	1/1:122:0,121:0:0:121:4304:-387.286,-36.4246,0	0/1:166:75,91:75:2696:91:3249:-242.66,0,-192.913	0/1:277:160,117:160:5706:117:4145:-289.848,0,-430.271	0/1:373:194,179:194:6935:179:6353:-459.576,0,-511.933	1/1:168:0,168:0:0:168:5962:-536.69,-50.573,0	1/1:302:0,302:0:0:302:10799:-971.812,-90.9111,0	1/1:169:0,169:0:0:169:5996:-539.748,-50.8741,0	0/1:49:20,29:20:705:29:1040:-79.1639,0,-49.0223	0/1:314:160,154:160:5731:154:5489:-399.615,0,-421.382	0/1:148:85,63:85:3048:63:2244:-157.671,0,-229.997	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	0/1:305:154,150:154:5515:150:5360:-390.738,0,-404.701	0/1:123:77,46:77:2768:46:1633:-110.23,0,-212.334	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:32:16,16:16:576:16:576:-42.542,0,-42.542	1/1:220:1,218:1:36:218:7754:-694.297,-62.6871,0	1/1:205:1,203:1:36:203:7229:-647.066,-58.1717,0	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	0/1:238:138,100:138:4941:100:3564:-249.324,0,-373.193	1/1:377:0,377:0:0:377:13392:-1205.08,-113.488,0	1/1:143:0,143:0:0:143:5082:-457.524,-43.0473,0	1/1:136:0,136:0:0:136:4846:-436.295,-40.9401,0	1/1:340:1,339:1:36:339:12045:-1080.31,-98.7519,0	0/1:280:203,77:203:7246:77:2727:-161.384,0,-567.904	1/1:97:0,97:0:0:97:3448:-310.534,-29.1999,0	1/1:114:0,114:0:0:114:4050:-364.686,-34.3174,0	1/1:160:0,160:0:0:160:5698:-512.941,-48.1648,0	1/1:45:1,44:1:36:44:1584:-139.253,-9.94808,0	1/1:229:0,229:0:0:229:8149:-733.429,-68.9359,0	0/1:158:68,89:68:2440:89:3169:-237.812,0,-172.233	1/1:403:0,402:0:0:402:14296:-1286.08,-121.014,0	1/1:359:2,357:2:72:357:12732:-1138.87,-101.233,0	1/1:344:0,344:0:0:344:12256:-1102.57,-103.554,0	1/1:268:4,259:4:144:259:9245:-818.707,-66.2171,0	0/1:35:22,13:22:792:13:458:-31.018,0,-61.0696	1/1:290:0,290:0:0:290:10319:-928.639,-87.2987,0	0/1:316:171,145:171:6135:145:5172:-370.496,0,-457.122	1/1:381:0,381:0:0:381:13582:-1222.17,-114.692,0	1/1:184:0,183:0:0:183:6476:-582.57,-55.0885,0	1/1:167:0,167:0:0:167:5980:-538.303,-50.272,0	0/1:187:88,99:88:3164:99:3520:-260.717,0,-228.691	1/1:285:0,285:0:0:285:10153:-913.704,-85.7936,0	1/1:57:0,57:0:0:57:2044:-184.232,-17.1587,0	0/1:162:78,84:78:2808:84:2969:-218.675,0,-204.192	1/1:168:1,167:1:36:167:5935:-530.661,-46.9748,0	0/1:139:74,65:74:2660:65:2315:-166.767,0,-197.802	0/1:211:103,108:103:3689:108:3832:-281.56,0,-268.693	0/1:137:96,41:96:3433:41:1464:-90.8149,0,-267.941	1/1:248:0,248:0:0:248:8807:-792.622,-74.6554,0	1/1:264:0,264:0:0:264:9422:-847.938,-79.4719,0
chr08	2499514	.	C	T	405406	PASS	AB=0.497817;ABP=3.28521;AC=153;AF=0.81383;AN=188;AO=14835;CIGAR=1X;DP=18200;DPB=18200;DPRA=0;EPP=32147.4;EPPR=7281.79;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.9892;MQMR=60;NS=94;NUMALT=1;ODDS=8.18335;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=523500;QR=118427;RO=3356;RPL=7112;RPP=57.6551;RPPR=40.2799;RPR=7723;RUN=1;SAF=7104;SAP=60.5545;SAR=7731;SRF=1557;SRP=40.9037;SRR=1799;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:105:1,104:1:36:104:3606:-321.151,-28.0099,0	1/1:300:1,299:1:36:299:10570:-947.626,-86.7107,0	0/1:282:159,123:159:5592:123:4376:-309.124,0,-418.514	1/1:381:1,380:1:36:380:13459:-1207.52,-111.094,0	0/1:171:81,90:81:2863:90:3190:-235.849,0,-206.43	0/1:153:70,83:70:2508:83:2911:-216.168,0,-179.915	1/1:245:0,245:0:0:245:8628:-776.525,-73.7524,0	1/1:379:0,379:0:0:379:13268:-1193.92,-114.09,0	1/1:200:0,200:0:0:200:7072:-636.546,-60.206,0	1/1:241:0,241:0:0:241:8542:-768.786,-72.5482,0	1/1:184:0,184:0:0:184:6452:-580.774,-55.3895,0	1/1:164:0,164:0:0:164:5789:-521.13,-49.3689,0	1/1:188:0,188:0:0:188:6596:-593.73,-56.5936,0	1/1:157:1,156:1:36:156:5420:-484.284,-43.6634,0	1/1:139:0,139:0:0:139:4921:-443.045,-41.8432,0	1/1:140:0,140:0:0:140:4902:-441.339,-42.1442,0	1/1:187:4,183:4:144:183:6434:-565.842,-42.979,0	1/1:127:0,127:0:0:127:4494:-404.631,-38.2308,0	1/1:162:0,162:0:0:162:5697:-512.851,-48.7669,0	1/1:318:0,318:0:0:318:11315:-1018.24,-95.7275,0	1/1:285:0,285:0:0:285:10043:-903.819,-85.7936,0	0/1:107:72,35:72:2525:35:1236:-79.334,0,-195.289	1/1:156:0,156:0:0:156:5537:-498.459,-46.9607,0	0/1:185:102,83:102:3617:83:2956:-210.584,0,-270.046	1/1:143:0,143:0:0:143:5071:-456.539,-43.0473,0	0/1:537:229,308:229:8068:308:10852:-814.94,0,-564.493	0/1:421:206,215:206:7295:215:7654:-562.167,0,-529.872	1/1:89:0,89:0:0:89:3087:-278.059,-26.7917,0	1/1:428:0,428:0:0:428:15232:-1370.6,-128.841,0	1/1:179:1,177:1:36:177:6235:-557.656,-50.3449,0	0/1:316:157,157:157:5526:157:5542:-404.027,0,-402.587	0/1:15:7,8:7:239:8:288:-21.752,0,-17.3273	1/1:32:0,32:0:0:32:1139:-102.818,-9.63296,0	1/1:16:1,15:1:36:15:540:-45.3383,-1.21821,0	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	1/1:33:0,33:0:0:33:1180:-106.508,-9.93399,0	1/1:410:0,410:0:0:410:14449:-1300.18,-123.422,0	0/1:228:80,148:80:2851:148:5244:-403.466,0,-188.193	0/1:168:75,93:75:2658:93:3307:-247.276,0,-188.893	1/1:11:0,11:0:0:11:388:-35.2574,-3.31133,0	0/1:285:166,119:166:5927:119:4219:-294.101,0,-447.746	0/1:107:52,55:52:1830:55:1963:-144.734,0,-132.769	0/1:250:137,113:137:4811:113:4044:-288.89,0,-357.89	0/1:178:83,95:83:2909:95:3306:-244.177,0,-208.462	1/1:161:0,161:0:0:161:5669:-510.338,-48.4658,0	0/1:192:104,88:104:3699:88:3143:-225.298,0,-275.313	0/1:201:96,105:96:3384:105:3701:-272.785,0,-244.27	0/1:366:133,233:133:4665:233:8159:-624.155,0,-309.838	1/1:181:2,179:2:72:179:6324:-562.42,-47.6497,0	1/1:318:0,316:0:0:316:11198:-1007.36,-95.1255,0	1/1:198:1,197:1:36:197:6908:-618.197,-56.0057,0	0/1:11:9,2:9:316:2:72:-3.52539,0,-25.4675	0/1:256:111,144:111:3942:144:5081:-380.314,0,-277.849	0/1:97:58,39:58:2063:39:1388:-96.019,0,-156.741	0/1:37:24,13:24:847:13:460:-30.5973,0,-65.4106	0/1:263:141,122:141:5029:122:4286:-306.75,0,-373.585	0/1:94:55,39:55:1906:39:1368:-95.1198,0,-143.517	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	0/1:26:10,16:10:341:16:568:-43.6251,0,-23.191	1/1:122:0,122:0:0:122:4317:-388.709,-36.7257,0	1/1:212:1,211:1:36:211:7469:-668.662,-60.2201,0	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/1:289:131,158:131:4613:158:5531:-410.925,0,-328.34	1/1:351:2,349:2:64:349:12289:-1099.79,-99.5828,0	1/1:120:0,120:0:0:120:4257:-383.311,-36.1236,0	1/1:218:1,217:1:36:217:7664:-686.204,-62.0263,0	1/1:322:2,320:2:72:320:11286:-1008.81,-90.0949,0	0/1:240:156,84:156:5533:84:2948:-193.307,0,-425.852	1/1:88:1,87:1:36:87:3058:-271.852,-22.8924,0	1/1:171:0,171:0:0:171:6064:-545.869,-51.4761,0	1/1:158:0,158:0:0:158:5500:-495.135,-47.5627,0	1/1:45:0,45:0:0:45:1581:-142.579,-13.5464,0	1/1:164:0,164:0:0:164:5791:-521.31,-49.3689,0	0/1:165:75,90:75:2650:90:3151:-234.146,0,-189.077	1/1:414:2,411:2:72:411:14536:-1301.21,-117.769,0	1/1:360:0,360:0:0:360:12740:-1146.43,-108.371,0	1/1:272:1,270:1:36:270:9529:-853.98,-78.3407,0	1/1:243:0,243:0:0:243:8593:-773.375,-73.1503,0	0/1:44:28,15:28:989:15:536:-35.4113,0,-76.1628	1/1:244:1,243:1:36:243:8666:-776.337,-69.853,0	0/1:213:126,87:126:4466:87:3060:-211.511,0,-337.991	1/1:520:0,520:0:0:520:18383:-1653.85,-156.536,0	1/1:195:0,195:0:0:195:6850:-616.579,-58.7009,0	1/1:112:0,112:0:0:112:3930:-353.894,-33.7154,0	0/1:176:89,87:89:3086:87:3046:-221.388,0,-224.985	1/1:298:0,298:0:0:298:10510:-945.828,-89.7069,0	1/1:103:0,103:0:0:103:3602:-324.388,-31.0061,0	0/1:132:70,62:70:2393:62:2189:-157.538,0,-175.884	1/1:168:0,168:0:0:168:5910:-532.016,-50.573,0	0/1:110:50,60:50:1745:60:2118:-157.775,0,-124.219	0/1:160:80,80:80:2831:80:2838:-207.494,0,-206.863	0/1:168:110,58:110:3854:58:2029:-132.309,0,-296.484	1/1:142:0,142:0:0:142:4990:-449.243,-42.7463,0	1/1:217:0,217:0:0:217:7604:-684.41,-65.3235,0
chr08	3249887	.	G	A	174661	PASS	AB=0.48417;ABP=11.4665;AC=152;AF=0.808511;AN=188;AO=8177;CIGAR=1X;DP=10190;DPB=10190;DPRA=0;EPP=17759.1;EPPR=4354.65;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9456;MQMR=60;NS=94;NUMALT=1;ODDS=4.64332;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=289874;QR=71554;RO=2008;RPL=8177;RPP=17759.1;RPPR=4363.33;RPR=0;RUN=1;SAF=8177;SAP=17759.1;SAR=0;SRF=2007;SRP=4354.65;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:54:0,54:0:0:54:1921:-173.165,-16.2556,0	1/1:249:0,249:0:0:249:8765:-788.846,-74.9565,0	0/1:125:71,54:71:2535:54:1909:-134.457,0,-190.772	1/1:174:1,173:1:36:173:6152:-550.178,-48.7809,0	0/1:87:40,47:40:1432:47:1680:-125.241,0,-102.988	0/1:49:25,24:25:881:24:864:-63.3321,0,-64.8554	1/1:198:0,198:0:0:198:7030:-632.718,-59.6039,0	1/1:209:1,208:1:36:208:7277:-651.388,-59.317,0	1/1:68:0,68:0:0:68:2413:-217.423,-20.47,0	1/1:111:0,111:0:0:111:3923:-353.264,-33.4143,0	1/1:37:0,37:0:0:37:1315:-118.652,-11.1381,0	1/1:53:0,53:0:0:53:1877:-169.207,-15.9546,0	1/1:51:0,51:0:0:51:1807:-162.91,-15.3525,0	1/1:63:0,63:0:0:63:2227:-200.692,-18.9649,0	1/1:52:0,52:0:0:52:1851:-166.869,-15.6536,0	1/1:45:0,45:0:0:45:1600:-144.29,-13.5464,0	1/1:56:0,56:0:0:56:2000:-180.274,-16.8577,0	1/1:60:0,60:0:0:60:2144:-193.228,-18.0618,0	1/1:31:0,31:0:0:31:1083:-97.7767,-9.33193,0	1/1:243:0,243:0:0:243:8640:-777.596,-73.1503,0	1/1:184:0,184:0:0:184:6550:-589.585,-55.3895,0	0/1:161:111,50:111:3949:50:1777:-111.743,0,-307.136	1/1:101:0,101:0:0:101:3570:-321.415,-30.404,0	0/1:115:55,60:55:1963:60:2137:-157.847,0,-142.326	1/1:89:0,89:0:0:89:3173:-285.793,-26.7917,0	0/1:315:168,147:168:5988:147:5207:-373.945,0,-444.202	0/1:231:101,130:101:3624:130:4638:-348.044,0,-256.827	1/1:25:0,25:0:0:25:885:-79.9665,-7.52575,0	1/1:316:0,316:0:0:316:11209:-1008.68,-95.1255,0	1/1:144:1,143:1:36:143:5064:-452.306,-39.75,0	0/1:118:56,62:56:1995:62:2203:-163.012,0,-144.302	0/1:7:5,2:5:180:2:68:-4.3505,0,-14.4449	1/1:29:0,29:0:0:29:1025:-92.5607,-8.72987,0	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	1/1:9:0,9:0:0:9:309:-28.1407,-2.70927,0	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:155:0,155:0:0:155:5532:-497.92,-46.6597,0	0/1:259:130,128:130:4593:128:4511:-328.131,0,-335.508	0/1:53:25,28:25:864:28:1004:-74.7213,0,-62.1177	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:155:66,89:66:2351:89:3127:-234.997,0,-165.189	0/1:35:13,22:13:468:22:758:-57.9981,0,-31.9236	0/1:206:112,92:112:3972:92:3244:-230.464,0,-295.981	0/1:71:31,40:31:1099:40:1420:-106.724,0,-77.8463	1/1:55:0,55:0:0:55:1964:-177.035,-16.5567,0	0/1:79:40,39:40:1436:39:1389:-101.526,0,-105.756	0/1:158:68,90:68:2427:90:3201:-240.75,0,-171.123	0/1:252:128,124:128:4584:124:4426:-322.653,0,-336.865	1/1:132:0,132:0:0:132:4682:-421.541,-39.736,0	1/1:186:0,186:0:0:186:6612:-595.091,-55.9916,0	1/1:240:0,240:0:0:240:8584:-772.538,-72.2472,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:203:113,90:113:4031:90:3173:-224.626,0,-301.87	0/1:46:23,22:23:824:22:788:-57.3387,0,-60.5772	0/1:32:13,19:13:464:19:629:-47.2857,0,-32.4645	0/1:129:63,66:63:2228:66:2317:-169.957,0,-161.949	0/1:72:37,35:37:1313:35:1260:-92.0313,0,-96.7955	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	0/1:17:13,4:13:468:4:144:-8.19611,0,-37.3421	1/1:90:0,90:0:0:90:3209:-289.032,-27.0927,0	1/1:102:1,101:1:36:101:3606:-321.148,-27.1068,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	0/1:225:116,109:116:4151:109:3818:-276.083,0,-306.041	1/1:213:1,212:1:36:212:7470:-668.741,-60.5211,0	1/1:63:0,63:0:0:63:2195:-197.809,-18.9649,0	1/1:134:0,134:0:0:134:4780:-430.354,-40.338,0	1/1:226:0,226:0:0:226:7925:-713.281,-68.0328,0	0/1:165:119,46:119:4245:46:1648:-98.9386,0,-332.559	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:100:0,100:0:0:100:3507:-315.838,-30.103,0	1/1:74:0,74:0:0:74:2633:-237.216,-22.2762,0	1/1:26:0,26:0:0:26:902:-81.4903,-7.82678,0	1/1:155:0,155:0:0:155:5449:-490.54,-46.6597,0	0/1:54:28,26:28:1008:26:909:-65.8678,0,-74.7807	1/1:173:0,173:0:0:173:6176:-555.938,-52.0782,0	1/1:214:1,213:1:36:213:7585:-679.094,-60.8221,0	1/1:124:0,124:0:0:124:4399:-396.081,-37.3277,0	1/1:123:0,123:0:0:123:4393:-395.527,-37.0267,0	0/1:8:2,6:2:63:6:216:-17.3823,0,-3.57491	1/1:157:1,156:1:36:156:5535:-494.677,-43.6634,0	0/1:141:69,72:69:2467:72:2563:-188.475,0,-179.838	1/1:275:1,274:1:36:274:9654:-865.219,-79.185,0	1/1:111:0,111:0:0:111:3953:-355.962,-33.4143,0	1/1:57:0,57:0:0:57:2040:-183.872,-17.1587,0	0/1:75:37,38:37:1304:38:1355:-99.6725,0,-95.0814	1/1:119:0,119:0:0:119:4267:-384.208,-35.8226,0	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	0/1:84:42,42:42:1491:42:1492:-109.288,0,-109.197	1/1:58:1,57:1:36:57:2009:-177.484,-13.8615,0	0/1:28:12,15:12:432:15:528:-39.3637,0,-30.7336	0/1:73:29,44:29:1032:44:1568:-119.436,0,-71.2183	0/1:46:31,15:31:1116:15:525:-33.7307,0,-86.9043	1/1:132:0,132:0:0:132:4677:-420.822,-39.736,0	1/1:83:0,83:0:0:83:2930:-263.932,-24.9855,0
chr08	3249901	.	AACG	AACA	182946	PASS	AB=0.487811;ABP=8.19807;AC=152;AF=0.808511;AN=188;AO=8433;CIGAR=3M1X;DP=10541;DPB=10541;DPRA=0;EPP=18219.6;EPPR=4411.25;GTI=0;LEN=1;MEANALT=1.5;MQM=59.9143;MQMR=59.9318;NS=94;NUMALT=1;ODDS=4.42332;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=301387;QR=69353;RO=2054;RPL=8422;RPP=18219.6;RPPR=4411.25;RPR=11;RUN=1;SAF=8433;SAP=18315;SAR=0;SRF=2054;SRP=4463.21;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:54:0,51:0:0:51:1820:-163.725,-15.3525,0	1/1:264:0,264:0:0:264:9413:-847.136,-79.4719,0	0/1:129:72,57:72:2444:57:2014:-142.698,0,-181.382	1/1:183:0,183:0:0:183:6561:-590.564,-55.0885,0	0/1:86:40,46:40:1365:46:1639:-121.78,0,-97.2551	0/1:53:26,27:26:881:27:968:-71.4828,0,-63.6438	1/1:206:0,204:0:0:204:7313:-657.341,-61.4101,0	1/1:218:1,217:1:36:217:7734:-692.417,-62.0263,0	1/1:70:0,69:0:0:69:2467:-222.049,-20.7711,0	1/1:116:0,115:0:0:115:4124:-371.093,-34.6185,0	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	1/1:55:0,55:0:0:55:1962:-176.854,-16.5567,0	1/1:53:0,53:0:0:53:1887:-170.108,-15.9546,0	1/1:63:0,62:0:0:62:2218:-199.525,-18.6639,0	1/1:52:0,51:0:0:51:1828:-164.559,-15.3525,0	1/1:45:0,45:0:0:45:1616:-145.73,-13.5464,0	1/1:59:0,58:0:0:58:2058:-185.13,-17.4597,0	1/1:60:0,59:0:0:59:2107:-189.588,-17.7608,0	1/1:33:0,31:0:0:31:1103:-99.3046,-9.33193,0	1/1:253:0,252:0:0:252:8971:-807.164,-75.8596,0	1/1:191:0,190:0:0:190:6794:-609.071,-57.1957,0	0/1:168:116,51:116:3895:51:1823:-113.843,0,-299.893	1/1:107:0,105:0:0:105:3754:-337.783,-31.6082,0	0/1:119:57,61:57:1945:61:2183:-159.606,0,-139.171	1/1:93:0,93:0:0:93:3331:-300.007,-27.9958,0	0/1:327:174,153:174:5816:153:5458:-392.911,0,-424.956	0/1:234:102,132:102:3450:132:4710:-353.619,0,-240.279	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	1/1:330:0,330:0:0:330:11811:-1060.09,-99.3399,0	1/1:149:1,147:1:36:147:5261:-470.061,-41.2791,0	0/1:129:57,72:57:1959:72:2562:-191.996,0,-137.75	0/1:7:5,2:5:165:2:72:-4.72951,0,-13.0679	1/1:29:0,29:0:0:29:1032:-93.1935,-8.72987,0	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:156:0,156:0:0:156:5574:-501.775,-46.9607,0	0/1:267:133,132:133:4489:132:4740:-345.605,0,-324.066	0/1:53:24,29:24:819:29:1044:-78.3202,0,-58.0678	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:164:68,94:68:2335:94:3350:-252.674,0,-161.365	0/1:36:13,23:13:454:23:824:-63.6462,0,-30.3548	0/1:213:115,97:115:3879:97:3472:-247.554,0,-285.269	0/1:74:31,43:31:1006:43:1539:-116.526,0,-68.5593	1/1:56:0,56:0:0:56:2003:-180.543,-16.8577,0	0/1:86:43,43:43:1483:43:1535:-112.554,0,-107.872	0/1:165:72,92:72:2437:92:3268:-244.693,0,-169.518	0/1:257:126,129:126:4307:129:4612:-337.103,0,-310.699	1/1:136:0,136:0:0:136:4861:-436.623,-40.9401,0	1/1:192:0,191:0:0:191:6852:-616.467,-57.4967,0	1/1:246:1,245:1:30:245:8736:-783.224,-71.0538,0	0/1:6:5,1:5:169:1:36:-1.79209,0,-13.7353	0/1:207:112,95:112:3796:95:3403:-244.115,0,-279.535	0/1:47:25,22:25:834:22:788:-57.0964,0,-61.2185	0/1:34:13,21:13:442:21:756:-58.1322,0,-29.8698	0/1:138:65,71:65:2156:71:2531:-186.78,0,-153.041	0/1:75:40,35:40:1347:35:1252:-89.3864,0,-98.9446	1/1:16:0,15:0:0:15:536:-48.3181,-4.51545,0	0/1:17:13,4:13:463:4:144:-8.19611,0,-36.8896	1/1:93:0,93:0:0:93:3310:-298.119,-27.9958,0	1/1:103:1,101:1:36:101:3609:-321.467,-27.4167,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:230:118,112:118:3992:112:4004:-291.312,0,-290.244	1/1:223:1,220:1:35:220:7890:-705.572,-63.3456,0	1/1:69:0,69:0:0:69:2462:-221.833,-20.7711,0	1/1:138:0,136:0:0:136:4880:-439.044,-40.9401,0	1/1:232:0,230:0:0:230:8225:-739.943,-69.2369,0	0/1:161:117,44:117:3895:44:1563:-92.4951,0,-302.292	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	1/1:105:0,105:0:0:105:3727:-335.629,-31.6082,0	1/1:76:0,75:0:0:75:2667:-239.995,-22.5773,0	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	1/1:163:0,163:0:0:163:5785:-520.769,-49.0679,0	0/1:59:32,27:32:1037:27:968:-69.6766,0,-75.8611	1/1:175:0,171:0:0:171:6132:-551.732,-51.4761,0	1/1:220:1,218:1:30:218:7799:-698.909,-63.2559,0	1/1:125:0,125:0:0:125:4454:-401.031,-37.6288,0	1/1:127:0,127:0:0:127:4533:-408.116,-38.2308,0	0/1:8:2,6:2:61:6:216:-17.3823,0,-3.38499	1/1:158:0,157:0:0:157:5635:-507.028,-47.2617,0	0/1:147:68,79:68:2311:79:2828:-210.507,0,-163.999	1/1:279:1,276:1:36:276:9877:-885.355,-80.1052,0	1/1:118:0,118:0:0:118:4207:-378.809,-35.5215,0	1/1:58:0,56:0:0:56:2016:-181.43,-16.8577,0	0/1:76:37,39:37:1267:39:1400:-103.421,0,-91.4496	1/1:122:0,120:0:0:120:4299:-386.775,-36.1236,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:89:46,43:46:1540:43:1532:-111.381,0,-112.093	1/1:60:1,59:1:35:59:2120:-187.57,-14.5632,0	0/1:28:13,15:13:440:15:531:-39.6931,0,-31.4944	0/1:75:30,44:30:1004:44:1562:-118.312,0,-68.1039	0/1:51:34,17:34:1124:17:612:-40.0575,0,-86.1042	1/1:143:0,143:0:0:143:5117:-460.672,-43.0473,0	1/1:82:0,81:0:0:81:2885:-259.654,-24.3834,0
chr08	3294995	.	A	G	346330	PASS	AB=0.467957;ABP=60.6236;AC=152;AF=0.808511;AN=188;AO=12736;CIGAR=1X;DP=16209;DPB=16209;DPRA=0;EPP=27658.9;EPPR=7542.36;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9908;MQMR=59.9796;NS=94;NUMALT=1;ODDS=3.7658;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=450921;QR=123777;RO=3472;RPL=6143;RPP=37.5363;RPPR=3.26047;RPR=6593;RUN=1;SAF=6143;SAP=37.5363;SAR=6593;SRF=1746;SRP=3.26047;SRR=1726;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:92:0,92:0:0:92:3248:-292.545,-27.6948,0	1/1:219:0,219:0:0:219:7741:-696.729,-65.9256,0	0/1:246:136,110:136:4880:110:3915:-278.491,0,-365.29	1/1:243:0,243:0:0:243:8633:-776.972,-73.1503,0	0/1:129:58,71:58:2069:71:2483:-184.89,0,-147.646	0/1:73:37,36:37:1320:36:1279:-93.4373,0,-97.1268	1/1:105:0,105:0:0:105:3730:-335.899,-31.6082,0	1/1:302:0,302:0:0:302:10712:-963.996,-90.9111,0	1/1:129:0,129:0:0:129:4592:-413.448,-38.8329,0	1/1:177:0,177:0:0:177:6243:-561.969,-53.2823,0	1/1:88:0,88:0:0:88:3073:-276.8,-26.4906,0	1/1:177:0,177:0:0:177:6257:-563.232,-53.2823,0	1/1:131:0,131:0:0:131:4675:-420.912,-39.4349,0	1/1:172:1,171:1:36:171:6093:-545.019,-48.3227,0	1/1:131:2,129:2:68:129:4530:-401.651,-33.2167,0	1/1:148:1,147:1:36:147:5183:-463.017,-40.9542,0	1/1:140:0,140:0:0:140:4946:-445.293,-42.1442,0	1/1:95:0,95:0:0:95:3382:-304.596,-28.5979,0	1/1:84:0,84:0:0:84:2999:-270.142,-25.2865,0	1/1:292:0,292:0:0:292:10360:-932.328,-87.9008,0	1/1:251:1,250:1:36:250:8803:-788.67,-71.9603,0	0/1:187:112,75:112:3995:75:2663:-183.624,0,-303.448	1/1:130:0,130:0:0:130:4616:-415.605,-39.1339,0	0/1:138:62,76:62:2178:76:2694:-201.162,0,-154.741	1/1:127:1,126:1:36:126:4448:-396.894,-34.6325,0	0/1:536:286,250:286:10200:250:8859:-635.95,0,-756.568	0/1:465:226,239:226:8095:239:8445:-620.081,0,-588.581	1/1:88:0,88:0:0:88:3118:-280.848,-26.4906,0	1/1:304:2,302:2:72:302:10684:-954.642,-84.6764,0	1/1:289:8,281:8:288:281:9934:-867.747,-60.7303,0	0/1:203:99,104:99:3498:104:3694:-271.555,0,-253.922	0/1:18:9,9:9:324:9:320:-23.7238,0,-24.0873	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:28:0,28:0:0:28:990:-89.4139,-8.42884,0	1/1:382:0,382:0:0:382:13545:-1218.85,-114.993,0	0/1:406:209,197:209:7436:197:6887:-497.69,0,-547.067	0/1:113:55,58:55:1964:58:2076:-153.094,0,-143.019	1/1:5:0,5:0:0:5:167:-15.3584,-1.50515,0	0/1:144:78,66:78:2770:66:2328:-166.43,0,-206.19	0/1:60:32,28:32:1135:28:987:-71.0812,0,-84.3963	0/1:315:178,137:178:6315:137:4831:-340.125,0,-473.619	0/1:162:81,81:81:2860:81:2880:-210.668,0,-208.87	1/1:146:0,146:0:0:146:5175:-465.893,-43.9504,0	0/1:264:135,129:135:4819:129:4543:-329.57,0,-354.394	0/1:291:156,135:156:5562:135:4809:-345.366,0,-413.106	0/1:231:128,103:128:4566:103:3628:-257.189,0,-341.568	1/1:139:1,138:1:36:138:4892:-436.837,-38.2449,0	1/1:237:0,237:0:0:237:8404:-756.334,-71.3441,0	1/1:142:0,142:0:0:142:5027:-452.58,-42.7463,0	0/1:10:6,4:6:212:4:144:-10.3033,0,-16.4145	0/1:222:132,90:132:4732:90:3224:-223.553,0,-359.209	0/1:105:65,40:65:2319:40:1411:-95.6784,0,-177.362	0/1:11:4,7:4:140:7:244:-18.9881,0,-9.63325	0/1:205:84,121:84:3008:121:4262:-322.051,0,-209.24	0/1:46:29,17:29:1040:17:604:-40.8432,0,-80.067	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	0/1:24:10,14:10:356:14:481:-36.3895,0,-25.1565	1/1:125:0,125:0:0:125:4418:-397.794,-37.6288,0	1/1:246:3,243:3:108:243:8612:-765.011,-63.9782,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:458:228,230:228:8106:230:8156:-596.173,0,-591.689	1/1:310:1,309:1:36:309:10946:-981.45,-89.721,0	1/1:126:0,126:0:0:126:4463:-401.842,-37.9298,0	1/1:175:0,175:0:0:175:6177:-556.024,-52.6803,0	1/1:337:3,334:3:108:334:11756:-1047.84,-91.3719,0	0/1:266:170,96:170:6052:96:3404:-226.503,0,-464.711	1/1:76:0,76:0:0:76:2703:-243.514,-22.8783,0	1/1:91:0,91:0:0:91:3238:-291.642,-27.3937,0	1/1:150:0,149:0:0:149:5248:-472.103,-44.8535,0	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	1/1:132:2,130:2:72:130:4572:-404.813,-32.8992,0	0/1:130:67,63:67:2404:63:2244:-163.09,0,-177.483	1/1:287:1,286:1:36:286:10124:-907.504,-82.7973,0	1/1:283:0,283:0:0:283:10057:-905.072,-85.1915,0	1/1:257:0,257:0:0:257:9152:-823.658,-77.3647,0	1/1:231:1,230:1:36:230:8178:-732.442,-65.9397,0	0/1:36:26,10:26:928:10:356:-21.5442,0,-73.0012	1/1:214:1,213:1:36:213:7505:-671.903,-60.8221,0	0/1:214:114,100:114:4075:100:3549:-255.199,0,-302.516	1/1:328:2,326:2:72:326:11511:-1029.04,-91.9011,0	1/1:187:1,186:1:36:186:6550:-585.992,-52.6943,0	1/1:133:0,133:0:0:133:4725:-425.409,-40.037,0	0/1:122:63,59:63:2256:59:2088:-151.462,0,-166.577	1/1:288:0,288:0:0:288:10177:-915.872,-86.6966,0	1/1:54:0,54:0:0:54:1928:-173.797,-16.2556,0	0/1:145:72,73:72:2563:73:2587:-189.43,0,-187.271	1/1:137:0,137:0:0:137:4868:-438.239,-41.2411,0	0/1:75:42,33:42:1490:33:1176:-83.5705,0,-111.816	0/1:220:120,100:120:4296:100:3538:-252.402,0,-320.591	0/1:183:125,58:125:4450:58:2063:-130.852,0,-345.583	1/1:289:3,286:3:108:286:10129:-901.476,-76.9225,0	1/1:206:0,206:0:0:206:7328:-659.572,-62.0122,0
chr08	3326456	.	ATACT	GTACC,ATACC	265113	PASS	AB=0.462678,0.532446;ABP=67.5208,51.765;AC=152,36;AF=0.808511,0.191489;AN=188;AO=9429,2858;CIGAR=1X3M1X,4M1X;DP=12375;DPB=12375.2;DPRA=0,1.56065;EPP=20140.5,6105.29;EPPR=9.52472;GTI=2;LEN=5,1;MEANALT=2.2766,2.79167;MQM=59.9556,59.9899;MQMR=60;NS=94;NUMALT=2;ODDS=0.28761;PAIRED=0,0;PAIREDR=0;PAO=4,0;PQA=136,0;PQR=0;PRO=0;QA=331886,102032;QR=103;RO=3;RPL=9391,2846;RPP=20149.1,6105.29;RPPR=9.52472;RPR=38,12;RUN=1,1;SAF=1,0;SAP=20469.1,6209.08;SAR=9428,2858;SRF=0;SRP=9.52472;SRR=3;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:82:0,82,0:0:0:82,0:2884,0:-259.798,-24.6845,0,-259.798,-24.6845,-259.798	1/1:214:0,210,0:0:0:210,0:7363,0:-662.374,-63.2163,0,-662.374,-63.2163,-662.374	1/2:260:0,118,142:0:0:118,142:4161,5092:-754.458,-415.676,-380.155,-339.136,0,-296.39	1/1:272:0,270,0:0:0:270,0:9496,0:-854.34,-81.2781,0,-854.34,-81.2781,-854.34	1/2:123:0,49,74:0:0:49,74:1743,2664:-359.776,-217.729,-202.978,-142.404,0,-120.128	1/2:93:0,51,42:0:0:51,42:1818,1512:-271.922,-123.731,-108.379,-148.549,0,-135.905	1/1:176:0,173,0:0:0:173,0:6087,0:-547.612,-52.0782,0,-547.612,-52.0782,-547.612	1/1:190:0,186,0:0:0:186,0:6549,0:-589.164,-55.9916,0,-589.164,-55.9916,-589.164	1/1:266:0,262,3:0:0:262,3:9116,108:-820.064,-78.8699,0,-811.252,-70.0576,-810.349	1/1:90:0,89,0:0:0:89,0:3121,0:-280.758,-26.7917,0,-280.758,-26.7917,-280.758	1/1:29:0,29,0:0:0:29,0:1016,0:-91.75,-8.72987,0,-91.75,-8.72987,-91.75	1/1:69:0,69,0:0:0:69,0:2401,0:-216.345,-20.7711,0,-216.345,-20.7711,-216.345	1/1:71:0,70,0:0:0:70,0:2473,0:-222.563,-21.0721,0,-222.563,-21.0721,-222.563	1/1:45:0,45,0:0:0:45,0:1580,0:-142.489,-13.5464,0,-142.489,-13.5464,-142.489	1/1:56:0,54,0:0:0:54,0:1910,0:-171.817,-16.2556,0,-171.817,-16.2556,-171.817	1/1:45:0,44,1:0:0:44,1:1556,36:-139.971,-13.2453,0,-137.034,-9.94808,-136.733	1/1:25:0,25,0:0:0:25,0:871,0:-78.7055,-7.52575,0,-78.7055,-7.52575,-78.7055	1/1:48:0,47,0:0:0:47,0:1683,0:-151.446,-14.1484,0,-151.446,-14.1484,-151.446	1/1:36:0,36,0:0:0:36,0:1283,0:-115.773,-10.8371,0,-115.773,-10.8371,-115.773	1/1:283:0,279,1:0:0:279,1:9793,36:-881,-83.9874,0,-878.062,-81.0416,-877.761	1/1:246:0,244,0:0:0:244,0:8590,0:-772.817,-73.4513,0,-772.817,-73.4513,-772.817	1/2:259:0,96,162:0:0:96,162:3372,5782:-745.815,-471.369,-442.47,-274.44,0,-225.673	1/1:144:0,143,1:0:0:143,1:5004,36:-450.155,-43.0473,0,-447.217,-40.1099,-446.916	1/2:140:0,76,62:0:0:76,62:2683,2213:-398.941,-180.458,-157.579,-218.526,0,-199.863	1/1:108:0,107,0:0:0:107,0:3767,0:-338.874,-32.2102,0,-338.874,-32.2102,-338.874	1/2:401:0,186,213:0:0:186,213:6548,7622:-1154.71,-621.646,-565.655,-533.169,0,-469.05	1/2:359:0,164,193:0:0:164,193:5785,6874:-1031.32,-560.302,-510.933,-471.042,0,-412.943	1/1:35:0,35,0:0:0:35,0:1232,0:-111.183,-10.5361,0,-111.183,-10.5361,-111.183	1/1:320:0,313,2:0:0:313,2:11098,72:-998.386,-94.2224,0,-992.511,-88.339,-991.909	1/1:180:0,176,3:0:0:176,3:6178,108:-555.783,-52.9813,0,-546.971,-44.1091,-546.068	1/2:143:0,71,72:0:0:71,72:2485,2537:-409.053,-206.904,-185.531,-202.5,0,-180.826	1/2:49:0,18,31:0:0:18,31:628,1096:-140.694,-89.618,-84.1995,-51.4268,0,-42.0948	1/1:17:0,17,0:0:0:17,0:606,0:-54.8713,-5.11751,0,-54.8713,-5.11751,-54.8713	1/2:10:1,2,7:1:36:2,7:71,252:-23.1075,-17.6245,-19.9599,-2.84275,0,-3.67462	1/1:21:0,21,0:0:0:21,0:731,0:-66.1092,-6.32163,0,-66.1092,-6.32163,-66.1092	1/1:12:0,12,0:0:0:12,0:415,0:-37.68,-3.61236,0,-37.68,-3.61236,-37.68	1/1:222:0,222,0:0:0:222,0:7844,0:-705.975,-66.8287,0,-705.975,-66.8287,-705.975	1/2:238:0,99,136:0:0:99,136:3495,4843:-679.371,-394.763,-364.961,-284.641,0,-243.701	1/2:46:0,21,25:0:0:21,25:748,900:-134.761,-73.7953,-67.4736,-61.3236,0,-53.7978	1/1:11:0,11,0:0:0:11,0:390,0:-35.4387,-3.31133,0,-35.4387,-3.31133,-35.4387	1/2:272:0,143,124:0:0:143,124:5073,4436:-775.057,-361.741,-318.694,-413.329,0,-376.002	1/2:40:0,28,12:0:0:28,12:1001,432:-117.226,-35.6088,-27.18,-81.9767,0,-78.3643	1/2:287:0,125,159:0:0:125,159:4396,5644:-817.729,-459.894,-422.266,-357.867,0,-310.003	1/2:67:0,45,22:0:0:45,22:1603,788:-195.277,-64.6221,-51.0758,-131.013,0,-124.39	1/1:78:0,78,0:0:0:78,0:2753,0:-248.008,-23.4803,0,-248.008,-23.4803,-248.008	1/2:204:0,96,108:0:0:96,108:3396,3829:-588.899,-312.294,-283.396,-276.958,0,-244.447	1/2:227:0,99,127:0:0:99,127:3444,4514:-647.857,-367.834,-338.032,-280.015,0,-241.784	1/2:331:0,142,189:0:0:142,189:5001,6747:-957.554,-550.41,-507.664,-407.498,0,-350.603	1/1:179:0,173,0:0:0:173,0:6076,0:-546.617,-52.0782,0,-546.617,-52.0782,-546.617	1/1:172:0,171,0:0:0:171,0:6065,0:-545.599,-51.4761,0,-545.599,-51.4761,-545.599	1/1:213:0,213,0:0:0:213,0:7493,0:-674.427,-64.1194,0,-674.427,-64.1194,-674.427	1/2:15:0,10,5:0:0:10,5:350,180:-43.5167,-15.0469,-12.0366,-28.8263,0,-27.3212	1/2:250:0,124,126:0:0:124,126:4376,4524:-725.729,-369.395,-332.068,-356.69,0,-318.76	1/2:76:0,37,39:0:0:37,39:1275,1404:-218.477,-114.919,-103.781,-103.91,0,-92.1693	1/2:45:0,13,31:0:0:13,31:461,1108:-127.897,-90.3393,-86.4259,-37.5531,0,-28.2212	1/2:163:1,83,79:1:31:83,79:2917,2832:-465.666,-2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chr08	3998882	.	G	A	147088	PASS	AB=0.507554;ABP=4.71619;AC=152;AF=0.808511;AN=188;AO=6851;CIGAR=1X;DP=8557;DPB=8557;DPRA=0;EPP=14879.8;EPPR=3688;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9257;MQMR=59.9835;NS=94;NUMALT=1;ODDS=5.6338;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=244307;QR=60655;RO=1701;RPL=6851;RPP=14879.8;RPPR=3696.68;RPR=0;RUN=1;SAF=6851;SAP=14879.8;SAR=0;SRF=1700;SRP=3688;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:50:0,50:0:0:50:1788:-161.198,-15.0515,0	1/1:78:1,77:1:36:77:2723:-241.711,-19.8821,0	0/1:198:97,101:97:3450:101:3632:-267.473,0,-251.109	1/1:169:0,169:0:0:169:6043:-543.813,-50.8741,0	0/1:64:33,31:33:1173:31:1100:-80.0412,0,-86.6096	0/1:60:18,42:18:631:42:1490:-116.331,0,-39.0539	1/1:80:0,80:0:0:80:2872:-258.716,-24.0824,0	1/1:250:0,250:0:0:250:8893:-800.212,-75.2575,0	1/1:75:0,75:0:0:75:2692:-242.524,-22.5773,0	1/1:76:0,76:0:0:76:2709:-244.05,-22.8783,0	1/1:49:0,49:0:0:49:1739:-156.793,-14.7505,0	1/1:78:0,78:0:0:78:2789:-251.25,-23.4803,0	1/1:76:0,76:0:0:76:2684:-241.802,-22.8783,0	1/1:40:0,40:0:0:40:1436:-129.525,-12.0412,0	1/1:52:0,52:0:0:52:1868:-168.399,-15.6536,0	1/1:53:0,53:0:0:53:1899:-171.184,-15.9546,0	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	1/1:38:0,38:0:0:38:1360:-122.701,-11.4391,0	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	1/1:129:0,129:0:0:129:4616:-415.597,-38.8329,0	1/1:105:0,105:0:0:105:3737:-336.531,-31.6082,0	0/1:191:112,79:112:3982:79:2820:-196.542,0,-301.075	1/1:95:0,95:0:0:95:3402:-306.365,-28.5979,0	0/1:77:29,48:29:1036:48:1724:-132.266,0,-70.3746	1/1:104:0,104:0:0:104:3728:-335.684,-31.3071,0	0/1:240:118,122:118:4217:122:4346:-319.066,0,-307.462	0/1:171:80,91:80:2871:91:3268:-242.859,0,-207.15	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	1/1:312:0,312:0:0:312:11155:-1003.84,-93.9214,0	1/1:107:1,106:1:36:106:3790:-337.697,-28.6119,0	0/1:113:62,51:62:2220:51:1821:-130.153,0,-166.048	0/1:10:6,4:6:216:4:139:-9.84191,0,-16.7802	1/1:40:0,39:0:0:39:1392:-125.219,-11.7402,0	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	1/1:15:0,15:0:0:15:532:-48.2131,-4.51545,0	1/1:21:0,21:0:0:21:741:-67.0116,-6.32163,0	1/1:177:0,175:0:0:175:6247:-561.964,-52.6803,0	0/1:117:37,80:37:1309:80:2837:-220.321,0,-82.889	0/1:43:19,24:19:680:24:860:-64.7775,0,-48.5849	1/1:6:0,6:0:0:6:205:-18.7833,-1.80618,0	0/1:124:56,68:56:2008:68:2391:-177.987,0,-143.666	0/1:61:33,28:33:1172:28:1000:-71.9528,0,-87.4247	0/1:140:57,83:57:2029:83:2957:-224.218,0,-140.736	0/1:37:17,20:17:603:20:720:-53.986,0,-43.4614	1/1:41:0,41:0:0:41:1456:-131.335,-12.3422,0	0/1:138:62,76:62:2216:76:2705:-202.152,0,-158.157	0/1:100:43,57:43:1529:57:2029:-152.778,0,-107.798	0/1:181:93,88:93:3336:88:3145:-228.788,0,-245.971	1/1:126:0,126:0:0:126:4446:-400.311,-37.9298,0	1/1:163:0,163:0:0:163:5810:-523.012,-49.0679,0	1/1:96:0,96:0:0:96:3433:-309.126,-28.8989,0	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:95:49,46:49:1748:46:1633:-118.659,0,-129.006	0/1:61:33,28:33:1176:28:1008:-72.6735,0,-87.7849	0/1:25:9,16:9:324:16:572:-44.2877,0,-21.9801	0/1:129:73,56:73:2616:56:2008:-142.16,0,-196.855	0/1:30:14,16:14:500:16:567:-42.3298,0,-36.3053	1/1:29:0,29:0:0:29:1029:-92.9211,-8.72987,0	0/1:20:8,12:8:288:12:432:-33.2006,0,-20.2468	1/1:89:0,89:0:0:89:3169:-285.406,-26.7917,0	1/1:88:0,88:0:0:88:3152:-283.905,-26.4906,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:182:91,91:91:3264:91:3260:-238.833,0,-239.193	1/1:143:3,140:3:108:140:5030:-442.769,-32.9721,0	1/1:48:0,48:0:0:48:1703:-153.555,-14.4494,0	1/1:117:0,117:0:0:117:4149:-373.591,-35.2205,0	1/1:174:1,173:1:36:173:6059:-541.493,-48.7809,0	0/1:169:127,42:127:4517:42:1497:-84.1485,0,-355.788	1/1:38:1,37:1:36:37:1328:-116.224,-7.84087,0	1/1:61:0,61:0:0:61:2154:-194.126,-18.3628,0	1/1:28:0,28:0:0:28:985:-88.9615,-8.42884,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:162:0,162:0:0:162:5773:-519.679,-48.7669,0	0/1:129:49,80:49:1751:80:2844:-217.364,0,-119.041	1/1:116:0,116:0:0:116:4149:-373.588,-34.9195,0	1/1:92:0,92:0:0:92:3304:-297.578,-27.6948,0	1/1:120:0,120:0:0:120:4198:-377.997,-36.1236,0	1/1:113:0,113:0:0:113:4032:-362.877,-34.0164,0	0/1:22:11,11:11:396:11:392:-28.9974,0,-29.3601	1/1:93:0,93:0:0:93:3300:-297.219,-27.9958,0	0/1:161:70,90:70:2484:90:3201:-239.787,0,-175.287	1/1:251:0,251:0:0:251:8981:-808.242,-75.5585,0	1/1:50:0,50:0:0:50:1796:-161.922,-15.0515,0	1/1:58:0,58:0:0:58:2084:-187.828,-17.4597,0	0/1:57:29,28:29:1023:28:986:-71.8925,0,-75.223	1/1:104:0,104:0:0:104:3728:-335.719,-31.3071,0	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	0/1:45:16,29:16:548:29:1035:-79.9167,0,-36.095	1/1:73:0,73:0:0:73:2624:-236.407,-21.9752,0	0/1:56:27,29:27:956:29:1016:-74.8853,0,-69.4981	0/1:106:49,57:49:1730:57:2052:-153.042,0,-124.074	0/1:74:58,16:58:2080:16:576:-29.8988,0,-165.194	1/1:134:0,133:0:0:133:4731:-425.587,-40.037,0	1/1:89:0,89:0:0:89:3181:-286.514,-26.7917,0
chr08	4490629	.	T	A	25894.5	PASS	AB=0.563337;ABP=94.0584;AC=37;AF=0.196809;AN=188;AO=1484;CIGAR=1X;DP=6818;DPB=6818;DPRA=1.0296;EPP=3190.83;EPPR=11403.9;GTI=1;LEN=1;MEANALT=1;MQM=59.9602;MQMR=59.9827;NS=94;NUMALT=1;ODDS=0.0712414;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=52872;QR=188025;RO=5330;RPL=1480;RPP=3190.83;RPPR=11403.9;RPR=4;RUN=1;SAF=0;SAP=3225.48;SAR=1484;SRF=0;SRP=11577;SRR=5330;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:46:46,0:46:1577:0:0:0,-13.8474,-142.218	0/0:56:56,0:56:1988:0:0:0,-16.8577,-179.194	0/1:118:57,61:57:1993:61:2166:-159.684,0,-144.121	0/0:125:125,0:125:4406:0:0:0,-37.6287,-396.716	0/1:31:17,14:17:600:14:491:-35.1884,0,-44.9973	0/1:29:11,18:11:388:18:648:-49.922,0,-26.5275	0/0:51:51,0:51:1789:0:0:0,-15.3525,-161.29	0/0:110:110,0:110:3819:0:0:0,-33.1133,-343.905	0/0:38:38,0:38:1329:0:0:0,-11.4391,-119.908	0/0:60:60,0:60:2113:0:0:0,-18.0618,-190.438	0/0:107:107,0:107:3824:0:0:0,-32.2102,-344.358	0/0:107:107,0:107:3769:0:0:0,-32.2102,-339.413	0/0:99:99,0:99:3501:0:0:0,-29.802,-315.302	0/0:99:99,0:99:3487:0:0:0,-29.802,-314.046	0/0:69:69,0:69:2448:0:0:0,-20.7711,-220.576	0/0:97:97,0:97:3452:0:0:0,-29.1999,-310.894	0/0:56:56,0:56:1996:0:0:0,-16.8577,-179.914	0/0:38:38,0:38:1340:0:0:0,-11.4391,-120.9	0/0:55:53,0:53:1892:0:0:0,-15.9546,-170.199	0/0:82:82,0:82:2885:0:0:0,-24.6845,-259.888	0/0:100:100,0:100:3486:0:0:0,-30.103,-313.956	0/1:50:5,45:5:172:45:1595:-128.788,0,-0.766474	0/0:45:45,0:45:1600:0:0:0,-13.5463,-144.29	0/1:42:13,29:13:468:29:1025:-79.9173,0,-29.8164	0/0:38:38,0:38:1348:0:0:0,-11.4391,-121.62	0/1:185:85,100:85:3016:100:3573:-266.084,0,-215.982	0/1:217:74,143:74:2610:143:5117:-395.348,0,-169.823	0/0:44:44,0:44:1553:0:0:0,-13.2453,-140.06	0/0:184:184,0:184:6489:0:0:0,-55.3895,-584.106	0/0:56:55,1:55:1948:1:36:0,-13.2594,-171.998	0/1:30:14,16:14:492:16:572:-42.7825,0,-35.5814	0/1:17:12,5:12:428:5:171:-10.6079,0,-33.7413	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/1:9:4,5:4:140:5:180:-13.8428,0,-10.2353	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6906	0/0:180:180,0:180:6388:0:0:0,-54.1854,-575.017	0/1:65:25,40:25:888:40:1436:-109.971,0,-60.6721	0/1:88:52,36:52:1829:36:1275:-88.5616,0,-138.398	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:82:27,55:27:952:55:1947:-150.819,0,-61.3107	0/1:50:23,27:23:812:27:957:-71.3944,0,-58.3494	0/1:129:68,61:68:2378:61:2174:-157.092,0,-175.443	0/1:61:28,33:28:981:33:1184:-88.5055,0,-70.2382	0/0:76:76,0:76:2696:0:0:0,-22.8783,-242.886	0/1:41:16,25:16:553:25:896:-68.6181,0,-37.7518	0/1:96:41,55:41:1449:55:1964:-148.133,0,-101.805	0/1:110:52,58:52:1828:58:2053:-151.927,0,-131.688	0/0:63:63,0:63:2240:0:0:0,-18.9649,-201.778	0/0:113:112,1:112:3918:1:36:0,-30.4181,-349.22	0/0:59:59,0:59:2077:0:0:0,-17.7608,-187.199	0/1:12:4,8:4:140:8:284:-22.291,0,-9.33222	0/1:121:70,51:70:2460:51:1827:-128.286,0,-185.232	0/1:55:19,36:19:672:36:1267:-97.7753,0,-44.2502	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	0/1:143:63,80:63:2228:80:2864:-214.95,0,-157.738	0/1:14:3,11:3:108:11:396:-31.7683,0,-5.86075	0/0:17:17,0:17:604:0:0:0,-5.11751,-54.6906	1/1:8:0,8:0:0:8:275:-25.0835,-2.40824,0	0/0:74:74,0:74:2594:0:0:0,-22.2762,-233.708	0/0:133:133,0:133:4690:0:0:0,-40.037,-422.265	0/0:17:17,0:17:596:0:0:0,-5.11751,-53.9678	0/1:81:31,50:31:1097:50:1763:-134.569,0,-74.6546	0/0:117:117,0:117:4099:0:0:0,-35.2205,-369.099	0/0:49:49,0:49:1713:0:0:0,-14.7505,-154.453	0/0:73:73,0:73:2589:0:0:0,-21.9752,-233.188	0/0:95:95,0:95:3369:0:0:0,-28.5978,-302.8	0/1:149:45,104:45:1600:104:3698:-288.123,0,-99.4367	0/0:89:88,1:88:3113:1:36:0,-23.1934,-276.8	0/0:49:49,0:49:1720:0:0:0,-14.7505,-155.085	0/0:57:57,0:57:2040:0:0:0,-17.1587,-183.872	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/0:58:58,0:58:2048:0:0:0,-17.4597,-184.592	0/1:54:15,39:15:532:39:1404:-110.404,0,-31.9575	0/0:72:71,0:71:2472:0:0:0,-21.3731,-222.378	0/0:95:95,0:95:3353:0:0:0,-28.5978,-301.987	0/0:88:88,0:88:3105:0:0:0,-26.4906,-279.679	0/0:75:75,0:75:2629:0:0:0,-22.5772,-236.859	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/0:71:70,1:70:2453:1:36:0,-17.7749,-217.427	0/1:76:21,55:21:717:55:1972:-154.876,0,-41.9675	0/0:80:80,0:80:2768:0:0:0,-24.0824,-249.36	0/0:70:70,0:70:2496:0:0:0,-21.0721,-224.893	0/0:115:115,0:115:4050:0:0:0,-34.6184,-364.69	0/1:39:19,20:19:672:20:701:-51.6716,0,-49.0667	0/0:101:100,0:100:3532:0:0:0,-30.103,-317.734	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/1:64:37,27:37:1300:27:968:-68.1714,0,-98.0353	0/0:89:89,0:89:3117:0:0:0,-26.7917,-280.76	0/1:98:53,45:53:1872:45:1603:-115.058,0,-139.258	0/1:157:93,64:93:3297:64:2279:-158.11,0,-249.688	0/1:75:32,43:32:1121:43:1535:-115.865,0,-78.6185	0/0:53:53,0:53:1892:0:0:0,-15.9546,-170.558	0/0:102:102,0:102:3660:0:0:0,-30.7051,-329.603
chr08	4718200	.	C	A	514391	PASS	AB=0.528746;ABP=61.3107;AC=152;AF=0.808511;AN=188;AO=18608;CIGAR=1X;DP=22468;DPB=22468;DPRA=0;EPP=40409.8;EPPR=8350.15;GTI=1;LEN=1;MEANALT=1.09574;MQM=54.3913;MQMR=56.7877;NS=94;NUMALT=1;ODDS=3.47181;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=665264;QR=136758;RO=3844;RPL=8374;RPP=406.731;RPPR=5.471;RPR=10234;RUN=1;SAF=8374;SAP=406.731;SAR=10234;SRF=1889;SRP=5.471;SRR=1955;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:140:0,140:0:0:140:5032:-451.029,-42.1442,0	1/1:298:0,298:0:0:298:10696:-958.178,-89.7069,0	0/1:580:261,319:261:9326:319:11409:-847.782,0,-663.261	1/1:519:0,517:0:0:517:18503:-1661.64,-155.633,0	0/1:60:18,42:18:644:42:1500:-116.88,0,-39.991	0/1:137:67,70:67:2389:70:2520:-184.988,0,-173.667	1/1:328:0,328:0:0:328:11720:-1052.21,-98.7378,0	1/1:392:0,391:0:0:391:14020:-1253.74,-117.703,0	1/1:361:0,361:0:0:361:12867:-1152.51,-108.672,0	1/1:296:0,296:0:0:296:10573:-948.365,-89.1049,0	1/1:132:0,131:0:0:131:4659:-418.028,-39.4349,0	1/1:239:1,238:1:36:238:8518:-760.842,-68.3479,0	1/1:190:0,190:0:0:190:6805:-610.635,-57.1957,0	1/1:211:0,211:0:0:211:7524:-674.759,-63.5173,0	1/1:178:0,178:0:0:178:6368:-572.105,-53.5833,0	1/1:155:0,155:0:0:155:5550:-496.706,-46.6597,0	1/1:157:0,156:0:0:156:5575:-499.28,-46.9607,0	1/1:134:0,134:0:0:134:4768:-427.514,-40.338,0	1/1:86:0,86:0:0:86:3083:-276.03,-25.8886,0	1/1:503:0,503:0:0:503:17864:-1602.58,-151.418,0	1/1:460:0,459:0:0:459:16400:-1470.6,-138.173,0	0/1:129:88,41:88:3104:41:1472:-93.7704,0,-240.502	1/1:278:1,277:1:36:277:9920:-887.233,-80.0907,0	0/1:272:129,143:129:4573:143:5105:-376.543,0,-328.792	1/1:207:0,207:0:0:207:7390:-661.921,-62.3132,0	0/1:586:230,356:230:8223:356:12710:-965.713,0,-563.092	0/1:673:281,392:281:9981:392:14010:-1053.76,0,-694.504	1/1:115:0,115:0:0:115:4110:-368.786,-34.6185,0	1/1:581:0,581:0:0:581:20750:-1865.14,-174.898,0	1/1:305:6,296:6:212:296:10619:-932.96,-71.9931,0	0/1:289:137,152:137:4855:152:5433:-399.522,0,-349.673	0/1:15:3,12:3:108:12:432:-34.6501,0,-5.54543	1/1:34:0,34:0:0:34:1220:-109.867,-10.235,0	0/1:12:4,8:4:129:8:288:-22.4328,0,-8.29857	1/1:17:0,17:0:0:17:612:-55.2877,-5.11751,0	1/1:20:0,20:0:0:20:720:-65.052,-6.0206,0	1/1:460:0,456:0:0:456:16304:-1464.6,-137.27,0	0/1:332:141,191:141:5024:191:6834:-513.35,0,-351.548	0/1:130:78,52:78:2746:52:1860:-128.104,0,-206.528	1/1:5:0,5:0:0:5:171:-15.5785,-1.50515,0	0/1:311:172,139:172:6139:139:4962:-351.765,0,-458.191	0/1:80:41,39:41:1451:39:1400:-101.411,0,-106.59	0/1:382:162,220:162:5778:220:7876:-591.734,0,-404.246	0/1:190:94,96:94:3355:96:3440:-251.783,0,-244.654	1/1:166:0,166:0:0:166:5943:-532.735,-49.971,0	0/1:249:110,139:110:3947:139:4964:-371.337,0,-280.153	0/1:272:123,149:123:4328:149:5324:-394.985,0,-306.668	0/1:396:180,214:180:6410:214:7647:-568.273,0,-457.232	1/1:276:1,275:1:36:275:9833:-879.824,-79.486,0	1/1:290:0,290:0:0:290:10398:-934.19,-87.2987,0	1/1:265:0,265:0:0:265:9478:-852.2,-79.773,0	0/1:4:3,1:3:108:1:36:-2.39156,0,-8.86863	0/1:388:152,236:152:5377:236:8475:-642.539,0,-365.803	0/1:138:61,77:61:2164:77:2763:-207.165,0,-153.448	0/1:19:8,11:8:288:11:392:-29.8489,0,-20.3308	0/1:328:171,157:171:6096:157:5614:-405.634,0,-449.255	0/1:147:66,81:66:2364:81:2882:-214.291,0,-168.544	1/1:15:0,15:0:0:15:536:-48.5617,-4.51545,0	0/1:27:16,11:16:561:11:392:-27.4822,0,-42.5303	1/1:243:0,243:0:0:243:8691:-780.193,-73.1503,0	1/1:233:0,232:0:0:232:8304:-744.406,-69.839,0	1/1:9:0,9:0:0:9:320:-29.0659,-2.70927,0	0/1:355:178,177:178:6338:177:6284:-458.477,0,-463.224	1/1:509:2,507:2:72:507:18151:-1621.91,-146.392,0	1/1:99:0,99:0:0:99:3523:-316.464,-29.802,0	1/1:222:0,222:0:0:222:7943:-713.677,-66.8287,0	1/1:369:3,366:3:108:366:13085:-1165.03,-101.144,0	0/1:311:184,127:184:6553:127:4556:-316.025,0,-495.966	1/1:112:0,112:0:0:112:4023:-360.501,-33.7154,0	1/1:242:0,242:0:0:242:8665:-777.159,-72.8493,0	1/1:197:0,197:0:0:197:7028:-631.616,-59.3029,0	1/1:43:0,43:0:0:43:1544:-138.877,-12.9443,0	1/1:236:0,236:0:0:236:8421:-752.712,-71.0431,0	0/1:199:98,101:98:3516:101:3602:-263.257,0,-256.013	1/1:490:0,490:0:0:490:17518:-1571.08,-147.505,0	1/1:529:0,529:0:0:529:18965:-1702.15,-159.245,0	1/1:148:0,148:0:0:148:5282:-473.72,-44.5524,0	1/1:283:3,280:3:108:280:10036:-889.789,-75.1417,0	0/1:43:33,10:33:1179:10:360:-19.7323,0,-93.3955	1/1:384:1,383:1:36:383:13636:-1218.4,-112.002,0	0/1:245:117,128:117:4179:128:4604:-339.315,0,-300.834	1/1:428:0,428:0:0:428:15328:-1373.57,-128.841,0	1/1:225:0,225:0:0:225:8035:-720.864,-67.7318,0	1/1:192:0,192:0:0:192:6883:-618.388,-57.7978,0	0/1:214:96,118:96:3409:118:4180:-310.401,0,-242.195	1/1:356:0,356:0:0:356:12675:-1138.5,-107.167,0	1/1:71:0,71:0:0:71:2544:-228.529,-21.3731,0	0/1:138:69,69:69:2468:69:2475:-180.745,0,-180.116	1/1:212:0,212:0:0:212:7566:-677.863,-63.8184,0	0/1:98:50,48:50:1768:48:1714:-124.423,0,-129.565	0/1:195:100,95:100:3517:95:3407:-247.262,0,-257.52	0/1:179:105,74:105:3719:74:2637:-182.546,0,-280.269	1/1:437:0,437:0:0:437:15627:-1402.78,-131.55,0	1/1:263:0,263:0:0:263:9383:-842.247,-79.1709,0
chr08	4718205	.	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chr08	4720794	.	ATCCCAACCT	TCCCCAACCT,ATCCCCAACCT	401409	PASS	AB=0.50476,0.491147;ABP=5.22235,10.6616;AC=133,55;AF=0.707447,0.292553;AN=188;AO=11430,5568;CIGAR=2X8M,2M1I8M;DP=17072;DPB=18386.7;DPRA=0,2.62587;EPP=24814.3,12093.8;EPPR=26.8965;GTI=1;LEN=2,1;MEANALT=2.43617,2.69231;MQM=48.2306,59.9982;MQMR=52;NS=94;NUMALT=2;ODDS=1.5524;PAIRED=0,0;PAIREDR=0;PAO=2776,109;PQA=95495.3,3418.33;PQR=3418.33;PRO=109;QA=398900,195136;QR=368;RO=11;RPL=7374,0;RPP=2094.52,12093.8;RPPR=3.20771;RPR=4056,5568;RUN=1,1;SAF=7373,0;SAP=2092,12093.8;SAR=4057,5568;SRF=5;SRP=3.20771;SRR=6;TYPE=mnp,ins	GT:DP:AD:RO:QR:AO:QA:GL	1/1:49:0,48,1:0:0:48,1:1688,27:-151.866,-14.4494,0,-149.738,-12.3219,-149.437	1/1:77:0,75,2:0:0:75,2:2659,68:-238.849,-22.5773,0,-233.333,-17.0615,-232.731	1/1:96:0,96,0:0:0:96,0:3367,0:-302.899,-28.8989,0,-302.899,-28.8989,-302.899	1/2:479:1,322,156:1:32:322,156:11284,5480:-1315.27,-443.448,-349.071,-869.547,0,-825.141	1/2:154:0,94,60:0:0:94,60:3272,2070:-428.8,-168.185,-139.888,-260.636,0,-242.575	1/1:77:0,77,0:0:0:77,0:2705,0:-243.349,-23.1793,0,-243.349,-23.1793,-243.349	1/2:347:0,155,190:0:0:155,190:5366,6704:-960.18,-545.819,-499.159,-414.272,0,-357.076	1/1:163:0,162,0:0:0:162,0:5721,0:-514.128,-48.7669,0,-514.128,-48.7669,-514.128	1/1:84:0,84,0:0:0:84,0:2925,0:-263.146,-25.2865,0,-263.146,-25.2865,-263.146	1/2:148:0,60,88:0:0:60,88:2063,3081:-409.787,-250.401,-232.34,-159.1,0,-132.609	1/2:133:0,49,84:0:0:49,84:1686,2956:-370.743,-240.831,-226.081,-130.094,0,-104.807	1/1:94:0,92,1:0:0:92,1:3278,36:-294.894,-27.6948,0,-291.957,-24.757,-291.656	1/1:73:0,72,0:0:0:72,0:2552,0:-229.581,-21.6742,0,-229.581,-21.6742,-229.581	1/2:158:0,44,114:0:0:44,114:1551,3993:-445.636,-324.89,-311.645,-120.73,0,-86.4123	1/2:111:1,47,63:1:35:47,63:1656,2192:-302.965,-175.425,-164.079,-125.03,0,-108.868	1/2:116:0,50,66:0:0:50,66:1763,2273:-321.978,-184.597,-169.546,-137.36,0,-117.492	1/1:80:0,79,1:0:0:79,1:2776,36:-249.737,-23.7814,0,-246.799,-20.8436,-246.498	1/1:57:0,57,0:0:0:57,0:1993,0:-179.297,-17.1587,0,-179.297,-17.1587,-179.297	1/1:37:0,37,0:0:0:37,0:1294,0:-116.411,-11.1381,0,-116.411,-11.1381,-116.411	1/2:525:1,356,166:1:35:356,166:12437,5848:-1433.55,-473.286,-368.968,-957.725,0,-910.602	1/2:302:0,139,163:0:0:139,163:4772,5683:-834.844,-462.172,-420.329,-372.653,0,-323.585	1/1:241:0,238,3:0:0:238,3:8281,90:-737.471,-71.6451,0,-730.277,-64.5323,-729.374	1/2:138:0,96,39:0:0:96,39:3227,1383:-360.486,-112.706,-83.8076,-247.803,0,-236.062	1/2:228:0,110,118:0:0:110,118:3821,4107:-638.951,-333.985,-300.871,-304.992,0,-269.471	1/2:131:0,46,85:0:0:46,85:1609,2969:-366.572,-241.405,-227.557,-125.06,0,-99.4722	1/1:612:0,602,5:0:0:602,5:21069,167:-1870.15,-181.22,0,-1856.63,-167.702,-1855.13	1/2:421:1,223,195:1:32:223,195:7833,6841:-1177.05,-554.158,-489.607,-620.628,0,-564.505	1/2:50:0,22,28:0:0:22,28:757,983:-138.562,-80.0455,-73.4228,-58.5463,0,-50.1174	1/1:695:0,682,6:0:0:682,6:23744,180:-2082.73,-205.302,0,-2068.34,-190.949,-2066.54	1/2:246:3,129,114:3:105:129,114:4479,4007:-665.732,-317.625,-287.336,-340.472,0,-314.698	1/2:289:0,188,100:0:0:188,100:6527,3518:-802.483,-286.423,-229.829,-516.101,0,-485.998	1/2:25:0,16,9:0:0:16,9:559,307:-69.063,-24.9033,-20.0868,-44.1531,0,-41.4438	1/2:30:0,18,12:0:0:18,12:620,420:-82.5875,-34.2041,-28.7856,-48.4085,0,-44.7961	1/1:11:0,10,1:0:0:10,1:349,36:-31.3956,-3.0103,0,-28.4573,-0.0675611,-28.1563	1/1:14:0,14,0:0:0:14,0:485,0:-43.6391,-4.21442,0,-43.6391,-4.21442,-43.6391	1/1:33:0,31,1:0:0:31,1:1085,36:-97.6089,-9.33193,0,-94.6713,-6.39391,-94.3703	1/1:366:0,361,4:0:0:361,4:12583,120:-1111.49,-108.672,0,-1101.9,-99.1638,-1100.69	1/2:286:1,145,140:1:34:145,140:5023,4862:-790.362,-392.502,-351.611,-395.408,0,-356.022	1/1:110:0,109,1:0:0:109,1:3806,32:-342.394,-32.8123,0,-339.816,-30.2343,-339.515	1/2:13:0,4,9:0:0:4,9:125,315:-35.463,-25.978,-24.7738,-9.79859,0,-7.08932	1/2:325:0,191,134:0:0:191,134:6648,4702:-911.202,-382.67,-325.174,-528.543,0,-488.205	1/2:78:0,29,49:0:0:29,49:1024,1735:-222.504,-141.291,-132.561,-81.1721,0,-66.4216	1/2:281:0,138,142:0:0:138,142:4819,4967:-785.875,-404.077,-362.535,-381.783,0,-339.037	1/2:122:0,65,57:0:0:65,57:2288,2016:-346.092,-164.451,-144.884,-181.887,0,-164.728	1/2:119:0,46,73:0:0:46,73:1625,2566:-334.975,-209.112,-195.264,-126.103,0,-104.128	1/1:243:0,240,1:0:0:240,1:8444,32:-748.263,-72.2472,0,-745.684,-69.6768,-745.383	1/1:168:0,167,1:0:0:167,1:5922,36:-532.745,-50.272,0,-529.807,-47.3345,-529.506	1/2:321:0,195,126:0:0:195,126:6777,4460:-901.654,-363.254,-304.553,-538.36,0,-500.43	1/2:250:0,119,131:0:0:119,131:4050,4596:-686.543,-373.818,-337.995,-312.504,0,-273.069	1/2:260:0,137,123:0:0:137,123:4734,4298:-714.656,-349.467,-308.226,-365.022,0,-327.995	1/1:432:0,426,5:0:0:426,5:14874,172:-1312.68,-128.239,0,-1298.72,-114.327,-1297.21	1/2:33:0,12,21:0:0:12,21:398,744:-92.6948,-60.9627,-57.3503,-32.0692,0,-25.7476	1/1:188:0,185,1:0:0:185,1:6572,27:-591.213,-55.6906,0,-589.084,-53.5623,-588.783	1/1:100:0,100,0:0:0:100,0:3502,0:-311.895,-30.103,0,-311.895,-30.103,-31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chr08	4782502	.	G	C	29825.2	PASS	AB=0.475568;ABP=22.852;AC=36;AF=0.191489;AN=188;AO=1836;CIGAR=1X;DP=10636;DPB=10636;DPRA=0.971846;EPP=3989.83;EPPR=19085.9;GTI=0;LEN=1;MEANALT=1.06818;MQM=59.9439;MQMR=59.9945;NS=94;NUMALT=1;ODDS=0.432395;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65376;QR=314558;RO=8792;RPL=1836;RPP=3989.83;RPPR=19094.6;RPR=0;RUN=1;SAF=0;SAP=3989.83;SAR=1836;SRF=1;SRP=19085.9;SRR=8791;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:97:97,0:97:3456:0:0:0,-29.1999,-311.251	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.834	0/1:239:131,108:131:4696:108:3853:-275.02,0,-350.845	0/0:353:353,0:353:12584:0:0:0,-106.264,-1132.39	0/1:74:36,38:36:1296:38:1368:-101.145,0,-94.6677	0/1:18:7,11:7:248:11:396:-30.5642,0,-17.2457	0/0:45:44,1:44:1584:1:36:0,-9.94807,-139.253	0/0:218:218,0:218:7788:0:0:0,-65.6245,-700.953	0/0:114:114,0:114:4083:0:0:0,-34.3174,-367.655	0/0:67:66,0:66:2368:0:0:0,-19.868,-213.018	0/0:89:89,0:89:3175:0:0:0,-26.7917,-285.974	0/0:126:126,0:126:4507:0:0:0,-37.9298,-405.798	0/0:87:87,0:87:3119:0:0:0,-26.1896,-280.936	0/0:113:113,0:113:4039:0:0:0,-34.0164,-363.698	0/0:106:106,0:106:3791:0:0:0,-31.9092,-341.388	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.503	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.634	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/0:233:233,0:233:8326:0:0:0,-70.14,-749.348	0/0:386:385,0:385:13750:0:0:0,-115.897,-1236.92	0/1:89:28,61:28:1004:61:2176:-169.315,0,-63.8842	0/0:141:141,0:141:5039:0:0:0,-42.4452,-453.656	0/1:100:55,45:55:1972:45:1593:-113.469,0,-147.652	0/0:145:145,0:145:5188:0:0:0,-43.6493,-467.06	0/1:258:138,120:138:4919:120:4288:-308.43,0,-365.197	0/1:384:189,195:189:6775:195:6942:-509.252,0,-494.225	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:292:290,1:290:10396:1:36:0,-84.3613,-931.942	0/0:141:140,1:140:4992:1:36:0,-38.847,-445.832	0/1:150:96,54:96:3440:54:1911:-127.11,0,-264.658	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:12:8,4:8:284:4:144:-9.70126,0,-22.1837	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:41:41,0:41:1460:0:0:0,-12.3422,-131.696	0/0:253:253,0:253:9037:0:0:0,-76.1606,-813.309	0/1:134:78,56:78:2787:56:2012:-141.014,0,-210.732	0/1:63:36,27:36:1280:27:968:-68.4725,0,-96.5383	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:145:80,65:80:2868:65:2319:-165.32,0,-214.708	0/1:52:31,21:31:1107:21:747:-51.9016,0,-84.2866	0/1:183:90,93:90:3236:93:3312:-243.202,0,-236.372	0/1:75:36,39:36:1296:39:1383:-102.191,0,-94.3667	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/1:116:57,58:57:2036:58:2042:-149.071,0,-148.534	0/1:211:120,91:120:4296:91:3256:-229.734,0,-323.3	0/1:193:134,59:134:4816:59:2116:-132.61,0,-375.494	0/0:106:106,0:106:3803:0:0:0,-31.9092,-342.466	0/0:166:166,0:166:5928:0:0:0,-49.971,-533.628	0/0:181:181,0:181:6488:0:0:0,-54.4864,-584.004	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	0/1:110:47,63:47:1677:63:2233:-168.119,0,-118.102	0/1:42:25,17:25:887:17:597:-41.4129,0,-67.5049	0/1:18:7,11:7:252:11:396:-30.5642,0,-17.6104	0/1:128:56,72:56:1996:72:2580:-193.917,0,-141.382	0/1:69:45,24:45:1608:24:860:-56.9436,0,-124.239	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/0:87:87,0:87:3099:0:0:0,-26.1896,-279.138	0/0:120:120,0:120:4299:0:0:0,-36.1236,-387.086	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:143:67,76:67:2412:76:2679:-198.304,0,-174.289	0/0:191:189,2:189:6770:2:72:0,-50.66,-602.534	0/0:55:55,0:55:1972:0:0:0,-16.5566,-177.755	0/0:119:119,0:119:4245:0:0:0,-35.8226,-382.229	0/0:210:204,6:204:7308:6:216:0,-43.4258,-637.979	0/1:166:63,103:63:2256:103:3676:-281.073,0,-153.332	0/0:69:68,1:68:2440:1:36:0,-17.1728,-216.257	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/0:65:65,0:65:2324:0:0:0,-19.5669,-209.42	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:146:146,0:146:5223:0:0:0,-43.9504,-470.208	0/1:124:83,41:83:2984:41:1464:-94.7283,0,-231.464	0/0:183:183,0:183:6524:0:0:0,-55.0885,-587.244	0/0:183:182,0:182:6511:0:0:0,-54.7875,-585.714	0/0:157:157,0:157:5623:0:0:0,-47.2617,-506.19	0/0:102:99,3:99:3544:3:108:0,-20.6299,-309.094	0/1:26:11,15:11:396:15:536:-40.748,0,-28.156	0/0:129:129,0:129:4619:0:0:0,-38.8329,-415.873	0/1:96:31,65:31:1104:65:2292:-177.632,0,-70.7718	0/0:229:229,0:229:8191:0:0:0,-68.9359,-737.204	0/0:74:74,0:74:2639:0:0:0,-22.2762,-237.757	0/0:90:89,0:89:3192:0:0:0,-26.7917,-287.143	0/1:51:29,22:29:1044:22:788:-55.8923,0,-78.9223	0/0:177:177,0:177:6317:0:0:0,-53.2823,-568.623	0/0:26:25,1:25:883:1:36:0,-4.2285,-76.1892	0/1:66:32,33:32:1143:33:1152:-84.0569,0,-83.252	0/0:103:102,0:102:3664:0:0:0,-30.7051,-329.603	0/1:57:34,23:34:1212:23:828:-57.657,0,-92.2276	0/1:115:71,44:71:2540:44:1562:-106.247,0,-194.233	0/1:96:39,57:39:1391:57:2007:-152,0,-96.5894	0/0:110:110,0:110:3944:0:0:0,-33.1133,-355.151	0/0:138:138,0:138:4944:0:0:0,-41.5421,-445.109
chr08	4887837	.	A	C	351004	PASS	AB=0.631518;ABP=786.665;AC=153;AF=0.81383;AN=188;AO=15016;CIGAR=1X;DP=16981;DPB=16981;DPRA=0;EPP=32609.8;EPPR=4263.44;GTI=3;LEN=1;MEANALT=1.03191;MQM=43.9007;MQMR=59.8976;NS=94;NUMALT=1;ODDS=8.26608;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=529193;QR=69711;RO=1962;RPL=7751;RPP=37.1667;RPPR=4202.85;RPR=7265;RUN=1;SAF=7751;SAP=37.1667;SAR=7265;SRF=1955;SRP=4202.85;SRR=7;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:64:0,64:0:0:64:2260:-185.385,-19.2659,0	1/1:279:0,279:0:0:279:9921:-718.853,-83.9874,0	0/1:213:67,146:67:2372:146:5184:-353.749,0,-149.62	1/1:353:1,352:1:36:352:12412:-958.39,-102.665,0	0/1:127:51,76:51:1809:76:2673:-162.781,0,-124.859	0/1:92:47,45:47:1660:45:1599:-94.909,0,-121.993	1/1:243:0,243:0:0:243:8605:-674.895,-73.1503,0	1/1:269:0,269:0:0:269:9540:-715.505,-80.9771,0	1/1:143:0,143:0:0:143:5032:-410.536,-43.0473,0	1/1:235:1,234:1:36:234:8300:-650.104,-67.1438,0	1/1:132:0,132:0:0:132:4671:-373.522,-39.736,0	1/1:150:0,150:0:0:150:5291:-398.342,-45.1545,0	1/1:158:0,158:0:0:158:5575:-423.408,-47.5627,0	1/1:135:0,135:0:0:135:4742:-352.951,-40.6391,0	1/1:177:1,176:1:36:176:6242:-498.084,-49.684,0	1/1:138:4,134:4:140:134:4703:-349.986,-29.5592,0	1/1:155:0,155:0:0:155:5532:-413.709,-46.6597,0	1/1:117:0,117:0:0:117:4148:-294.143,-35.2205,0	1/1:91:1,90:1:36:90:3220:-227.6,-23.7955,0	1/1:560:5,555:5:172:555:19515:-1569.96,-152.759,0	1/1:281:1,280:1:36:280:9747:-773.815,-80.9912,0	0/1:183:90,93:90:3216:93:3253:-214.949,0,-234.488	1/1:121:0,121:0:0:121:4263:-349.35,-36.4246,0	0/1:183:46,137:46:1621:137:4820:-307.834,0,-91.0883	1/1:182:0,182:0:0:182:6460:-506.905,-54.7875,0	0/1:416:120,296:120:4264:296:10507:-708.265,0,-258.71	0/1:363:113,250:113:4011:250:8780:-581.94,0,-251.908	1/1:75:0,75:0:0:75:2642:-211.468,-22.5773,0	1/1:538:1,537:1:36:537:18875:-1516.26,-158.356,0	1/1:266:2,264:2:72:264:9359:-682.903,-73.2373,0	0/1:188:48,140:48:1699:140:4900:-341.721,0,-96.6017	1/1:10:0,10:0:0:10:356:-29.8555,-3.0103,0	1/1:20:0,20:0:0:20:705:-60.9504,-6.0206,0	0/1:19:14,5:14:500:5:180:-8.57896,0,-39.6166	1/1:9:0,9:0:0:9:315:-21.5586,-2.70927,0	1/1:30:0,30:0:0:30:1052:-88.1804,-9.0309,0	1/1:393:1,392:1:36:392:13778:-1101.53,-114.802,0	0/1:235:111,123:111:3968:123:4299:-271.877,0,-286.355	0/1:105:36,69:36:1292:69:2428:-148.28,0,-84.9756	1/1:8:0,8:0:0:8:284:-23.0575,-2.40824,0	0/1:282:86,196:86:3080:196:6900:-456.559,0,-192.538	0/1:44:24,20:24:864:20:697:-38.7112,0,-64.8372	0/1:185:71,114:71:2519:114:4048:-260.596,0,-171.272	0/1:103:42,61:42:1471:61:2180:-147.123,0,-101.678	1/1:99:1,98:1:32:98:3380:-262.67,-27.0142,0	0/1:132:61,71:61:2158:71:2491:-170.798,0,-154.75	0/1:235:100,135:100:3544:135:4782:-285.699,0,-248.43	0/1:188:61,127:61:2172:127:4472:-289.755,0,-139.153	1/1:192:1,191:1:36:191:6704:-531.049,-54.3433,0	1/1:379:0,379:0:0:379:13350:-1092.45,-114.09,0	1/1:351:0,351:0:0:351:12387:-1013.81,-105.662,0	0/1:15:4,11:4:144:11:387:-29.0831,0,-8.79817	0/1:229:82,147:82:2904:147:5214:-318.05,0,-191.725	0/1:52:18,34:18:636:34:1200:-77.3543,0,-41.9145	0/1:19:2,17:2:72:17:604:-38.204,0,-1.11715	0/1:230:75,155:75:2654:155:5450:-348.384,0,-169.87	0/1:89:32,57:32:1128:57:2009:-135.394,0,-75.0366	1/1:17:0,17:0:0:17:608:-51.1913,-5.11751,0	0/1:18:7,11:7:252:11:396:-23.3063,0,-17.6104	1/1:201:0,201:0:0:201:7030:-573.226,-60.507,0	1/1:243:3,240:3:108:240:8433:-643.619,-63.0761,0	1/1:6:0,6:0:0:6:192:-16.013,-1.80618,0	0/1:256:82,174:82:2919:174:6113:-418.566,0,-185.882	1/1:520:4,516:4:144:516:18117:-1457.82,-143.222,0	1/1:178:0,178:0:0:178:6269:-479.127,-53.5833,0	1/1:224:1,223:1:32:223:7832:-645.474,-64.2314,0	1/1:312:7,305:7:235:305:10721:-847.052,-72.4434,0	0/1:169:88,81:88:3133:81:2815:-169.761,0,-231.321	1/1:66:0,66:0:0:66:2331:-178.946,-19.868,0	1/1:172:0,172:0:0:172:6099:-468.921,-51.7772,0	1/1:187:0,187:0:0:187:6588:-522.745,-56.2926,0	1/1:44:0,44:0:0:44:1576:-122.972,-13.2453,0	1/1:249:0,249:0:0:249:8842:-657.333,-74.9565,0	0/1:109:46,63:46:1640:63:2220:-136.816,0,-115.076	1/1:267:1,266:1:36:266:9316:-717.581,-76.7767,0	1/1:330:1,329:1:27:329:11658:-882.838,-96.6401,0	1/1:259:0,259:0:0:259:9183:-692.102,-77.9668,0	1/1:214:2,212:2:72:212:7515:-532.109,-57.5837,0	0/1:15:10,5:10:352:5:176:-11.6696,0,-27.5027	1/1:251:0,251:0:0:251:8844:-682.027,-75.5585,0	0/1:176:72,104:72:2568:104:3673:-208.911,0,-178.389	1/1:415:0,414:0:0:414:14620:-1138.43,-124.626,0	1/1:204:0,204:0:0:204:7133:-563.159,-61.4101,0	1/1:120:1,118:1:36:118:4123:-328.778,-32.541,0	0/1:127:55,72:55:1960:72:2551:-163.187,0,-138.445	1/1:262:0,262:0:0:262:9128:-719.431,-78.8699,0	1/1:79:0,79:0:0:79:2824:-219.06,-23.7814,0	0/1:112:41,71:41:1460:71:2514:-159.815,0,-97.9807	1/1:148:0,148:0:0:148:5223:-402.503,-44.5524,0	0/1:78:30,48:30:1068:48:1661:-102.16,0,-72.9517	0/1:144:42,102:42:1483:102:3565:-235.54,0,-90.4154	0/1:85:47,38:47:1688:38:1334:-74.256,0,-126.619	1/1:252:1,251:1:36:251:8803:-711.413,-72.2613,0	1/1:192:0,192:0:0:192:6744:-550.618,-57.7978,0
chr08	5291253	.	T	C	86801.7	PASS	AB=0.530741;ABP=61.4864;AC=36;AF=0.191489;AN=188;AO=3823;CIGAR=1X;DP=19096;DPB=19096;DPRA=1.21087;EPP=8304.55;EPPR=33120.1;GTI=0;LEN=1;MEANALT=1.09677;MQM=59.9976;MQMR=59.9915;NS=94;NUMALT=1;ODDS=2.6172;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=135043;QR=542808;RO=15267;RPL=1930;RPP=3.78789;RPPR=133.819;RPR=1893;RUN=1;SAF=1930;SAP=3.78789;SAR=1893;SRF=8117;SRP=136.011;SRR=7150;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:60:60,0:60:2112:0:0:0,-18.0618,-190.347	0/0:264:264,0:264:9381:0:0:0,-79.4719,-844.259	0/1:227:120,107:120:4281:107:3753:-269.636,0,-317.134	0/0:560:557,2:557:19858:2:72:0,-161.772,-1779.93	0/1:67:34,33:34:1212:33:1175:-85.8879,0,-89.2173	0/1:87:40,47:40:1416:47:1664:-123.858,0,-101.545	0/0:262:261,1:261:9289:1:36:0,-75.2716,-832.382	0/0:397:394,3:394:14035:3:108:0,-109.434,-1252.85	0/0:182:182,0:182:6482:0:0:0,-54.7875,-583.466	0/0:235:234,1:234:8331:1:36:0,-67.1438,-746.203	0/0:173:173,0:173:6130:0:0:0,-52.0782,-551.807	0/0:247:246,1:246:8693:1:36:0,-70.7561,-778.77	0/0:164:164,0:164:5822:0:0:0,-49.3689,-524.095	0/0:161:160,1:160:5671:1:36:0,-44.8676,-506.915	0/0:183:183,0:183:6533:0:0:0,-55.0885,-588.053	0/0:134:133,1:133:4712:1:36:0,-36.7397,-420.642	0/0:147:146,1:146:5187:1:36:0,-40.6531,-463.373	0/0:115:115,0:115:4098:0:0:0,-34.6184,-369.006	0/0:106:106,0:106:3755:0:0:0,-31.9092,-338.153	0/0:423:422,1:422:15019:1:36:0,-123.737,-1347.84	0/0:307:307,0:307:10886:0:0:0,-92.4162,-979.647	0/1:236:65,171:65:2315:171:6031:-471.856,0,-137.567	0/0:207:205,2:205:7323:2:72:0,-55.4765,-652.285	0/1:225:113,112:113:4031:112:3998:-292.278,0,-295.247	0/0:163:162,1:162:5759:1:32:0,-45.8686,-515.228	0/1:546:243,303:243:8618:303:10681:-796.852,0,-611.152	0/1:433:207,226:207:7384:226:8001:-589.772,0,-534.262	0/0:103:103,0:103:3663:0:0:0,-31.0061,-329.875	0/0:537:537,0:537:19116:0:0:0,-161.653,-1720	0/0:176:173,3:173:6146:3:108:0,-42.9061,-543.166	0/1:265:137,128:137:4844:128:4549:-329.803,0,-356.345	0/1:16:6,10:6:212:10:356:-27.5648,0,-14.6083	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:30:30,0:30:1046:0:0:0,-9.0309,-94.4484	0/0:548:548,0:548:19376:0:0:0,-164.964,-1743.4	0/1:279:139,140:139:4972:140:4965:-363.015,0,-363.642	0/1:182:96,86:96:3426:86:3012:-216.523,0,-253.766	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/1:205:90,115:90:3196:115:4058:-303.7,0,-226.154	0/1:80:39,41:39:1400:41:1455:-107.163,0,-102.217	0/1:355:183,172:183:6467:172:6133:-445.207,0,-474.477	0/1:212:106,106:106:3757:106:3756:-274.423,0,-274.513	0/0:169:169,0:169:6013:0:0:0,-50.8741,-541.278	0/1:259:112,147:112:4001:147:5168:-387.296,0,-282.312	0/1:199:108,90:108:3855:90:3192:-227.54,0,-287.182	0/1:398:190,207:190:6700:207:7385:-544.827,0,-483.213	0/0:217:216,1:216:7681:1:36:0,-61.7252,-687.729	0/0:224:224,0:224:8019:0:0:0,-67.4307,-721.727	0/0:217:215,2:215:7624:2:72:0,-58.4868,-679.359	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:226:99,127:99:3504:127:4498:-336.958,0,-247.539	0/1:114:51,63:51:1813:63:2225:-166.193,0,-129.132	0/1:11:4,7:4:144:7:248:-19.3529,0,-10.0023	0/1:255:122,133:122:4354:133:4692:-345.68,0,-315.272	0/1:91:42,49:42:1496:49:1735:-129.04,0,-107.541	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:26:13,13:13:468:13:449:-32.9107,0,-34.6329	0/0:199:199,0:199:7068:0:0:0,-59.905,-636.183	0/0:229:228,1:228:8073:1:36:0,-65.3376,-722.912	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:369:151,218:151:5357:218:7710:-582.858,0,-371.184	0/0:452:448,3:448:16007:3:108:0,-126.049,-1430.11	0/0:136:136,0:136:4854:0:0:0,-40.9401,-437.014	0/0:170:169,1:169:6012:1:36:0,-47.5768,-537.589	0/0:315:309,6:309:10998:6:208:0,-75.7654,-970.662	0/1:235:64,171:64:2266:171:6021:-471.256,0,-133.46	0/0:128:128,0:128:4545:0:0:0,-38.5318,-409.219	0/0:138:136,1:136:4845:1:36:0,-38.0027,-432.606	0/0:156:156,0:156:5550:0:0:0,-46.9607,-499.627	0/0:35:34,1:34:1201:1:36:0,-6.93777,-104.795	0/0:220:219,1:219:7808:1:36:0,-62.6283,-699.153	0/1:208:104,104:104:3712:104:3648:-265.913,0,-271.669	0/0:372:372,0:372:13211:0:0:0,-111.983,-1188.8	0/0:279:279,0:279:9919:0:0:0,-83.9874,-892.658	0/0:200:198,2:198:7017:2:72:0,-53.3693,-624.749	0/0:228:228,0:228:8160:0:0:0,-68.6348,-734.415	0/1:22:16,6:16:568:6:208:-12.4364,0,-44.8292	0/0:155:155,0:155:5522:0:0:0,-46.6596,-497.107	0/1:267:145,122:145:5111:122:4313:-307.975,0,-379.759	0/0:310:310,0:310:11029:0:0:0,-93.3193,-992.51	0/0:208:205,2:205:7311:2:72:0,-55.8363,-651.207	0/0:145:144,1:144:5095:1:36:0,-40.0511,-455.099	0/1:173:80,93:80:2863:93:3278:-243.162,0,-205.829	0/0:373:372,1:372:13226:1:36:0,-108.686,-1186.55	0/0:70:70,0:70:2472:0:0:0,-21.0721,-222.733	0/1:212:118,94:118:4196:94:3331:-236.19,0,-314.006	0/0:189:189,0:189:6726:0:0:0,-56.8947,-605.419	0/1:110:55,55:55:1955:55:1909:-138.969,0,-143.112	0/1:293:152,141:152:5383:141:4926:-355.296,0,-396.403	0/1:224:88,136:88:3106:136:4732:-358.61,0,-212.338	0/0:234:233,1:233:8290:1:36:0,-66.8427,-742.514	0/0:267:267,0:267:9498:0:0:0,-80.375,-854.783
chr08	5296376	.	C	T	56336.4	PASS	AB=0.33795;ABP=2720.28;AC=86;AF=0.457447;AN=188;AO=4099;CIGAR=1X;DP=12971;DPB=12971;DPRA=6.9629;EPP=8903.88;EPPR=18771.5;GTI=20;LEN=1;MEANALT=1.1828;MQM=59.9837;MQMR=59.9581;NS=94;NUMALT=1;ODDS=0.35384;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=146777;QR=314925;RO=8850;RPL=0;RPP=8903.88;RPPR=18771.5;RPR=4099;RUN=1;SAF=4099;SAP=8903.88;SAR=0;SRF=8850;SRP=19220.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:75:39,36:39:1382:36:1292:-94.0065,0,-102.1	0/1:120:82,38:82:2921:38:1364:-86.9371,0,-226.985	0/1:417:350,66:350:12413:66:2356:-86.7107,0,-991.312	0/1:329:208,120:208:7383:120:4288:-287.001,0,-565.389	0/0:99:92,7:92:3265:7:252:0,-6.77301,-271.042	0/0:97:89,8:89:3163:8:288:0,-2.9325,-258.628	0/1:90:45,45:45:1608:45:1604:-117.557,0,-117.917	0/1:250:181,69:181:6410:69:2476:-147.836,0,-501.728	0/1:107:69,38:69:2453:38:1356:-90.1303,0,-188.813	0/1:176:97,79:97:3463:79:2828:-201.778,0,-258.899	0/1:131:65,66:65:2336:66:2353:-172.592,0,-171.064	0/1:190:114,74:114:4068:74:2656:-182.332,0,-309.355	0/1:188:100,86:100:3541:86:3096:-222.515,0,-262.549	0/1:156:84,71:84:2979:71:2552:-182.91,0,-221.324	0/1:102:40,62:40:1418:62:2228:-169.65,0,-97.2108	0/1:86:33,53:33:1180:53:1900:-145.388,0,-80.6195	0/1:108:46,62:46:1622:62:2224:-167.912,0,-113.756	0/1:61:23,38:23:824:38:1364:-104.698,0,-56.1205	0/1:60:29,31:29:1040:31:1116:-82.6899,0,-75.8526	0/1:66:29,37:29:1036:37:1324:-99.5941,0,-73.6859	0/1:188:92,96:92:3262:96:3412:-250.703,0,-237.208	0/0:91:89,2:89:3163:2:72:0,-20.557,-278.059	0/1:137:83,54:83:2949:54:1920:-131.836,0,-224.399	0/1:95:81,14:81:2896:14:492:-16.0145,0,-232.278	0/1:97:75,21:75:2664:21:752:-38.7476,0,-210.748	0/1:305:263,42:263:9368:42:1493:-42.8484,0,-751.071	0/0:331:304,27:304:10844:27:968:0,-12.2036,-888.428	0/1:66:32,34:32:1140:34:1215:-89.7878,0,-82.4123	0/1:226:152,74:152:5390:74:2644:-170.174,0,-417.203	0/1:112:60,52:60:2143:52:1860:-133.964,0,-159.422	0/1:153:133,20:133:4755:20:708:-17.988,0,-381.494	0/0:18:17,1:17:594:1:36:0,-1.82026,-50.1873	0/1:24:12,12:12:432:12:424:-31.2717,0,-31.9965	0/1:17:14,3:14:500:3:104:-4.5853,0,-40.2187	0/1:13:9,4:9:316:4:144:-9.40023,0,-24.8655	0/1:38:32,5:32:1131:5:180:-5.05413,0,-90.6	0/1:351:196,155:196:6950:155:5560:-394.861,0,-519.419	0/0:271:251,20:251:8953:20:716:0,-16.8114,-740.986	0/1:96:65,31:65:2315:31:1103:-70.6808,0,-179.711	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/1:151:113,38:113:4023:38:1364:-77.6052,0,-316.805	0/1:95:83,12:83:2964:12:428:-10.261,0,-238.396	0/1:211:170,41:170:6067:41:1468:-68.8988,0,-482.617	0/1:82:56,26:56:2004:26:936:-59.875,0,-155.949	0/1:107:54,52:54:1932:52:1872:-136.489,0,-141.888	0/1:126:108,18:108:3846:18:640:-19.9995,0,-308.407	0/1:159:139,20:139:4964:20:720:-17.265,0,-399.044	0/1:187:154,33:154:5503:33:1168:-49.1346,0,-439.104	0/1:118:72,46:72:2550:46:1648:-113.068,0,-194.229	0/1:243:149,94:149:5314:94:3380:-231.264,0,-405.245	0/1:102:71,31:71:2523:31:1112:-69.6863,0,-196.617	0/1:34:28,6:28:986:6:216:-9.55549,0,-78.8171	0/1:245:219,26:219:7791:26:936:-10.8067,0,-627.104	0/1:95:82,13:82:2936:13:464:-13.4997,0,-235.876	0/1:44:40,4:40:1440:4:144:-0.0682978,0,-116.652	0/1:190:162,28:162:5784:28:1004:-33.4802,0,-463.481	0/1:98:86,12:86:3064:12:428:-9.35787,0,-246.489	0/1:14:11,3:11:378:3:108:-5.86075,0,-30.1347	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4067	0/1:101:42,59:42:1500:59:2089:-157.874,0,-104.891	0/1:175:100,74:100:3563:74:2648:-185.827,0,-268.14	0/1:14:11,3:11:392:3:108:-5.86075,0,-31.4056	0/1:184:153,31:153:5451:31:1116:-45.3622,0,-435.332	0/1:254:161,92:161:5712:92:3296:-220.339,0,-437.681	0/1:82:36,46:36:1288:46:1648:-123.924,0,-91.5391	0/0:131:123,8:123:4377:8:284:0,-13.5316,-368.156	0/1:161:74,87:74:2643:87:3112:-231.841,0,-189.65	0/1:228:200,28:200:7093:28:1004:-22.041,0,-569.802	0/1:98:53,45:53:1904:45:1616:-116.229,0,-142.137	0/1:136:78,58:78:2775:58:2068:-145.451,0,-209.026	0/1:102:59,43:59:2096:43:1540:-108.188,0,-158.205	0/1:15:11,4:11:392:4:140:-8.42913,0,-31.1046	0/1:169:127,42:127:4511:42:1508:-85.1405,0,-355.286	0/1:125:86,39:86:3049:39:1396:-88.3094,0,-237.011	0/1:258:170,88:170:6041:88:3152:-206.239,0,-466.132	0/1:259:134,125:134:4796:125:4468:-324.324,0,-353.824	0/1:150:112,38:112:4000:38:1360:-77.5461,0,-315.036	0/1:119:69,49:69:2443:49:1752:-122.083,0,-184.244	0/1:44:38,6:38:1355:6:212:-6.17948,0,-109.004	0/1:194:125,69:125:4462:69:2472:-164.334,0,-343.35	0/1:186:158,28:158:5623:28:1008:-35.0448,0,-450.203	0/1:273:167,106:167:5942:106:3804:-260.362,0,-452.682	0/1:116:71,43:71:2523:43:1544:-104.576,0,-192.645	0/1:90:25,64:25:896:64:2296:-179.75,0,-53.8089	0/1:64:45,19:45:1587:19:684:-42.6244,0,-123.854	0/1:241:136,103:136:4837:103:3700:-260.895,0,-363.18	0/1:26:9,17:9:320:17:604:-46.8638,0,-21.3156	0/1:104:72,32:72:2545:32:1144:-71.9624,0,-197.993	0/1:157:84,71:84:2995:71:2548:-182.551,0,-222.763	0/1:117:89,28:89:3167:28:1004:-55.4554,0,-250.035	0/1:228:163,64:163:5768:64:2284:-137.128,0,-450.547	0/1:107:84,22:84:2982:22:792:-39.3367,0,-236.344	0/1:180:88,92:88:3123:92:3304:-243.393,0,-227.112	0/1:217:99,118:99:3507:118:4244:-316.814,0,-250.519
chr08	5296399	.	T	A	162246	PASS	AB=0.528826;ABP=108.043;AC=95;AF=0.505319;AN=188;AO=7813;CIGAR=1X;DP=14677;DPB=14677;DPRA=0;EPP=16960;EPPR=481.615;GTI=1;LEN=1;MEANALT=1.10638;MQM=59.9011;MQMR=59.2733;NS=94;NUMALT=1;ODDS=68.8676;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=278603;QR=244965;RO=6853;RPL=6745;RPP=8960.25;RPPR=2818.78;RPR=1068;RUN=1;SAF=6746;SAP=8966.56;SAR=1067;SRF=5977;SRP=8247.89;SRR=876;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:76:37,39:37:1324:39:1385:-102.069,0,-96.5838	0/1:118:39,79:39:1396:79:2759:-213.023,0,-90.4176	0/1:408:180,227:180:6440:227:8112:-607.348,0,-456.957	0/1:320:118,202:118:4227:202:7192:-550.994,0,-284.23	0/1:101:53,48:53:1864:48:1720:-124.681,0,-137.633	0/1:96:39,57:39:1395:57:2021:-153.263,0,-96.9495	0/1:85:44,41:44:1559:41:1476:-107.549,0,-115.013	0/1:243:66,177:66:2352:177:6311:-494.924,0,-138.789	0/1:104:39,65:39:1404:65:2317:-177.482,0,-95.3522	0/1:169:77,92:77:2755:92:3304:-246.69,0,-197.317	0/1:128:64,64:64:2296:64:2261:-165.219,0,-168.369	0/1:189:75,114:75:2676:114:4048:-307.616,0,-184.191	0/1:184:85,99:85:3048:99:3497:-259.552,0,-219.16	0/1:152:70,82:70:2516:82:2944:-219.437,0,-180.935	0/1:101:62,39:62:2228:39:1396:-95.5351,0,-169.679	0/1:86:53,33:53:1892:33:1160:-78.8153,0,-144.669	0/1:103:60,43:60:2152:43:1536:-107.527,0,-162.94	0/1:58:35,23:35:1260:23:815:-56.211,0,-96.2457	0/1:61:31,30:31:1099:30:1072:-78.4296,0,-80.8566	0/1:65:37,28:37:1328:28:1008:-71.4694,0,-100.255	0/1:185:97,88:97:3472:88:3148:-227.855,0,-257.001	0/1:195:133,62:133:4761:62:2228:-142.055,0,-369.727	0/1:136:55,81:55:1961:81:2873:-217.856,0,-135.046	0/1:91:32,59:32:1133:59:2109:-162.683,0,-74.8829	0/1:95:23,72:23:820:72:2553:-201.423,0,-45.5247	0/1:801:441,360:441:15747:360:12853:-915.306,0,-1174.14	0/1:322:169,153:169:6037:153:5404:-389.56,0,-446.502	0/1:65:33,31:33:1188:31:1102:-79.5927,0,-87.6028	0/1:439:154,285:154:5496:285:10220:-786.874,0,-360.97	0/1:112:55,57:55:1972:57:2048:-150.876,0,-144.039	0/1:147:66,81:66:2343:81:2866:-213.794,0,-166.875	0/1:16:14,2:14:504:2:72:-2.02024,0,-40.8816	0/1:22:11,11:11:396:11:396:-29.3601,0,-29.3601	0/1:17:5,12:5:176:12:432:-34.1037,0,-11.0675	0/1:12:4,8:4:144:8:269:-20.9238,0,-9.70126	0/1:36:5,31:5:180:31:1112:-89.5543,0,-5.71498	0/1:683:258,424:258:9252:424:15117:-1153.67,0,-624.59	0/1:266:103,163:103:3655:163:5779:-440.151,0,-249.08	0/1:96:65,31:65:2315:31:1104:-70.7718,0,-179.71	0/1:8:2,6:2:72:6:208:-16.6508,0,-4.42848	0/1:149:81,68:81:2892:68:2436:-174.642,0,-215.663	0/1:94:30,64:30:1080:64:2288:-177.885,0,-69.2164	0/1:203:118,85:118:4227:85:3027:-211.551,0,-319.5	0/1:82:58,24:58:2067:24:864:-53.3981,0,-161.616	0/1:106:52,54:52:1868:54:1930:-142.067,0,-136.489	0/1:268:143,125:143:5097:125:4464:-321.167,0,-377.766	0/1:153:93,60:93:3305:60:2156:-148.249,0,-251.611	0/1:179:99,79:99:3529:79:2813:-199.467,0,-263.876	0/1:117:46,71:46:1648:71:2540:-193.631,0,-113.388	0/1:242:94,148:94:3376:148:5256:-400.326,0,-231.206	0/1:309:90,219:90:3228:219:7856:-613.977,0,-195.366	0/1:33:18,15:18:625:15:530:-38.098,0,-46.6385	0/1:246:97,149:97:3476:149:5314:-404.341,0,-238.998	0/1:163:99,64:99:3548:64:2265:-155.042,0,-269.866	0/1:44:21,23:21:756:23:820:-60.8772,0,-55.1219	0/1:182:95,87:95:3369:87:3066:-221.381,0,-248.639	0/1:94:39,55:39:1373:55:1960:-148.379,0,-95.5698	0/1:30:7,23:7:252:23:820:-65.0632,0,-13.9267	0/1:46:22,24:22:792:24:860:-63.8735,0,-57.7583	0/1:100:60,40:60:2156:40:1432:-99.0746,0,-164.204	0/1:172:78,94:78:2787:94:3370:-251.739,0,-199.293	0/1:14:3,11:3:108:11:396:-31.7683,0,-5.86075	0/1:361:220,141:220:7888:141:5033:-344.313,0,-600.213	0/1:250:94,156:94:3357:156:5585:-427.513,0,-227.088	0/1:83:46,37:46:1652:37:1324:-94.4766,0,-123.983	1/1:124:7,117:7:252:117:4181:-353.442,-14.2988,0	0/1:154:84,69:84:3020:69:2464:-175.595,0,-225.612	0/1:218:164,54:164:5863:54:1899:-105.558,0,-462.157	0/1:100:45,55:45:1616:55:1968:-147.292,0,-115.627	0/1:134:56,78:56:1988:78:2755:-207.836,0,-138.854	0/1:234:81,152:81:2896:152:5448:-419.873,0,-189.494	0/1:15:4,11:4:140:11:392:-31.1046,0,-8.42913	0/1:166:42,124:42:1508:124:4391:-345.393,0,-86.0436	0/1:126:87,39:87:3089:39:1375:-86.1173,0,-240.308	0/1:253:90,162:90:3205:162:5761:-442.389,0,-212.453	0/1:256:127,129:127:4545:129:4634:-340.158,0,-332.151	0/1:145:37,108:37:1332:108:3860:-303.945,0,-76.533	0/1:117:53,64:53:1896:64:2281:-170.328,0,-135.698	0/1:42:24,18:24:864:18:648:-46.0086,0,-65.4393	0/1:193:69,124:69:2480:124:4455:-343.02,0,-165.354	0/1:186:81,105:81:2885:105:3718:-278.83,0,-203.894	0/1:273:109,164:109:3912:164:5868:-446.05,0,-270.077	0/1:115:44,71:44:1580:71:2508:-191.354,0,-107.873	0/1:86:61,25:61:2173:25:896:-55.0718,0,-169.946	0/1:64:43,21:43:1540:21:748:-48.3794,0,-119.627	0/1:242:107,135:107:3840:135:4798:-359.129,0,-272.946	0/1:26:14,12:14:500:12:424:-30.6696,0,-37.5094	0/1:100:68,31:68:2420:31:1108:-69.8693,0,-187.895	0/1:150:69,79:69:2484:79:2835:-210.52,0,-178.944	0/1:120:60,59:60:2131:59:2108:-153.807,0,-155.876	0/1:228:143,85:143:5080:85:3036:-204.836,0,-388.711	0/1:106:86,20:86:3068:20:712:-32.4975,0,-244.43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chr08	5296425	.	AGAAC	AGAAT,GGAAT	384297	PASS	AB=0.52321,0.471672;ABP=80.7279,118.779;AC=97,91;AF=0.515957,0.484043;AN=188;AO=9294,7882;CIGAR=4M1X,1X3M1X;DP=17262;DPB=17262.4;DPRA=0,7.12821;EPP=20141.3,17101.2;EPPR=9.52472;GTI=2;LEN=1,5;MEANALT=2.8617,2.88172;MQM=59.1387,53.0447;MQMR=60;NS=94;NUMALT=2;ODDS=0.236228;PAIRED=0,0;PAIREDR=0;PAO=0,2;PQA=0,72;PQR=0;PRO=0;QA=331883,274665;QR=105;RO=3;RPL=13,4134;RPP=20071.9,44.0583;RPPR=9.52472;RPR=9281,3748;RUN=1,1;SAF=8,4132;SAP=20115.2,43.212;SAR=9286,3750;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:75:0,13,62:0:0:13,62:468,2136:-210.556,-172.39,-168.476,-38.5226,0,-19.8588	1/2:234:0,144,87:0:0:144,87:5081,3041:-656.243,-243.836,-200.488,-412.441,0,-386.252	1/2:307:0,192,114:0:0:192,114:6862,3982:-878.818,-320.406,-262.608,-558.403,0,-524.085	1/2:519:0,231,286:0:0:231,286:8257,10027:-1481.6,-808.586,-739.048,-673.004,0,-586.909	1/1:157:0,145,11:0:0:145,11:5200,391:-467.649,-43.6494,0,-435.965,-11.8981,-432.654	1/2:162:0,133,29:0:0:133,29:4745,1019:-468.007,-81.2787,-41.2417,-387.074,0,-378.344	1/2:187:0,75,112:0:0:75,112:2670,3867:-528.85,-311.294,-288.717,-217.906,0,-184.191	1/2:364:0,196,164:0:0:196,164:7021,5715:-1026.4,-455.149,-396.147,-571.294,0,-521.925	1/2:140:0,46,94:0:0:46,94:1644,3279:-392.418,-258.549,-244.702,-134.22,0,-105.923	1/2:202:0,39,160:0:0:39,160:1400,5570:-564.129,-449.928,-438.188,-114.212,0,-66.0469	1/2:151:0,53,98:0:0:53,98:1885,3408:-429.229,-275.659,-259.704,-153.922,0,-124.421	1/2:232:1,85,145:1:35:85,145:3048,5076:-650.36,-402.341,-379.602,-245.507,0,-204.706	1/2:225:0,78,145:0:0:78,145:2784,5013:-629.723,-404.015,-380.535,-225.699,0,-182.05	1/2:184:0,78,105:0:0:78,105:2788,3675:-523.273,-297.38,-273.9,-225.934,0,-194.326	1/2:164:0,54,108:0:0:54,108:1936,3793:-464.721,-306.886,-290.631,-157.832,0,-125.321	1/2:135:0,37,96:0:0:37,96:1332,3347:-378.734,-270.107,-258.969,-108.645,0,-79.7463	1/2:162:0,70,92:0:0:70,92:2501,3172:-459.836,-256.055,-234.983,-204.132,0,-176.437	1/2:99:0,36,63:0:0:36,63:1288,2180:-280.522,-175.524,-164.687,-105.35,0,-86.3851	1/2:70:0,23,46:0:0:23,46:824,1598:-196.314,-129.131,-122.207,-67.3182,0,-53.4708	1/2:233:0,105,128:0:0:105,128:3700,4469:-662.075,-360.936,-329.328,-301.489,0,-262.957	1/2:252:0,59,193:0:0:59,193:2112,6704:-711.354,-539.21,-521.45,-172.498,0,-114.399	1/2:108:0,92,16:0:0:92,16:3270,560:-312.134,-45.6878,-17.993,-266.795,0,-261.979	1/2:128:0,42,85:0:0:42,85:1506,2983:-363.61,-240.81,-228.167,-122.931,0,-97.3433	1/2:267:0,236,30:0:0:236,30:8484,1041:-775.506,-83.6536,-12.6106,-691.897,0,-682.867	1/2:144:0,94,49:0:0:94,49:3364,1692:-409.109,-136.439,-108.142,-272.756,0,-258.006	1/2:558:0,458,97:0:0:458,97:16306,3401:-1603.78,-275.856,-137.984,-1327.96,0,-1298.76	1/2:224:0,177,46:0:0:177,46:6277,1605:-640.994,-129.786,-76.504,-511.304,0,-497.456	1/2:106:0,50,56:0:0:50,56:1800,1965:-305.993,-159.118,-144.067,-147.23,0,-130.372	1/2:292:0,136,155:0:0:136,155:4853,5421:-835.017,-439.503,-398.563,-395.603,0,-348.944	1/2:215:0,98,115:0:0:98,115:3477,4055:-609.94,-326.707,-297.206,-283.33,0,-248.712	1/2:308:0,249,57:0:0:249,57:8937,1980:-889.004,-160.112,-85.1556,-728.905,0,-711.746	1/2:13:0,10,3:0:0:10,3:352,108:-37.7317,-9.0792,-6.0689,-29.0079,0,-28.1048	1/2:28:0,12,16:0:0:12,16:432,559:-80.9256,-45.6717,-42.0593,-35.6088,0,-30.7924	1/2:20:0,17,2:0:0:17,2:604,72:-55.0746,-5.87483,-0.757325,-49.1993,0,-48.5973	1/2:19:0,11,8:0:0:11,8:396,287:-55.7856,-23.4862,-20.1749,-32.6562,0,-30.248	1/2:26:0,19,7:0:0:19,7:680,245:-75.5846,-20.1421,-14.4226,-55.7928,0,-53.6856	1/2:503:0,241,261:0:0:241,261:8614,9111:-1440.23,-738.845,-666.297,-701.432,0,-622.864	1/1:470:0,433,37:0:0:433,37:15458,1286:-1388.43,-130.346,0,-1285.12,-26.6843,-1273.98	1/2:99:0,55,43:0:0:55,43:1961,1484:-279.789,-119.978,-103.421,-159.876,0,-146.931	1/2:5:0,3,2:0:0:3,2:108,71:-14.9552,-6.14,-5.23691,-9.17208,0,-8.57002	1/2:267:0,186,80:0:0:186,80:6630,2805:-766.284,-225.931,-169.94,-540.5,0,-516.418	1/2:60:0,38,22:0:0:38,22:1353,759:-171.836,-61.5994,-50.1603,-110.584,0,-103.962	1/2:283:0,198,83:0:0:198,83:7085,2879:-809.881,-232.214,-172.61,-577.772,0,-552.786	1/2:149:1,101,47:1:34:101,47:3605,1650:-424.587,-130.991,-103.345,-291.151,0,-279.76	1/2:185:0,82,103:0:0:82,103:2940,3563:-528.429,-288.738,-264.053,-240.043,0,-209.037	1/2:168:0,125,42:0:0:125,42:4477,1464:-483.781,-118.719,-81.0904,-365.149,0,-352.506	1/2:115:0,66,48:0:0:66,48:2374,1688:-329.378,-135.714,-115.846,-193.754,0,-179.304	1/2:200:0,104,93:0:0:104,93:3675,3252:-560.486,-261.219,-229.912,-299.308,0,-271.313	1/2:210:0,102,107:0:0:102,107:3622,3724:-595.751,-300.871,-270.166,-294.935,0,-262.725	1/2:356:0,193,162:0:0:193,162:6928,5681:-1024.72,-460.074,-401.975,-564.644,0,-515.877	1/2:246:0,153,92:0:0:153,92:5500,3218:-709.546,-260.92,-214.862,-448.782,0,-421.087	1/2:29:0,21,8:0:0:21,8:748,278:-83.8662,-22.8918,-16.5701,-61.3237,0,-58.9154	1/2:214:0,171,43:0:0:171,43:6110,1511:-620.061,-122.135,-70.6584,-498.276,0,-485.332	1/2:82:0,55,27:0:0:55,27:1967,936:-236.511,-76.1856,-59.6289,-160.675,0,-152.547	1/2:37:0,23,12:0:0:23,12:828,423:-101.455,-34.0211,-27.0974,-67.5329,0,-63.9205	1/2:144:0,78,65:0:0:78,65:2800,2235:-408.552,-180.143,-156.663,-228.488,0,-208.921	1/2:107:0,90,17:0:0:90,17:3190,588:-307.892,-48.0092,-20.9165,-260.23,0,-255.112	1/2:19:0,11,7:0:0:11,7:396,248:-52.5267,-20.2059,-16.8946,-32.3853,0,-30.2781	1/1:26:0,26,0:0:0:26,0:936,0:-84.5301,-7.82678,0,-84.5301,-7.82678,-84.5301	1/2:152:0,55,94:0:0:55,94:1965,3255:-422.856,-262.942,-246.386,-159.973,0,-131.676	1/2:244:0,114,130:0:0:114,130:4073,4530:-698.588,-366.695,-332.378,-332.245,0,-293.111	1/2:27:0,21,6:0:0:21,6:741,212:-77.8899,-17.5521,-11.2305,-60.69,0,-58.8838	1/2:213:0,136,75:0:0:136,75:4857,2600:-606.694,-210.813,-169.873,-395.993,0,-373.416	1/2:433:0,246,186:0:0:246,186:8783,6478:-1238.5,-522.892,-448.838,-715.677,0,-659.685	1/2:120:0,47,72:0:0:47,72:1688,2509:-340.731,-203.028,-188.88,-137.748,0,-116.073	1/2:115:0,94,21:0:0:94,21:3372,733:-334.648,-59.6325,-31.3357,-275.365,0,-269.043	1/2:251:0,76,174:0:0:76,174:2677,6036:-704.383,-486.468,-463.59,-217.904,0,-165.525	1/2:187:0,123,63:0:0:123,63:4363,2189:-532.148,-176.681,-139.654,-355.456,0,-336.491	1/2:98:0,25,72:0:0:25,72:881,2515:-275.156,-203.571,-196.045,-71.71,0,-50.0359	1/2:150:0,70,80:0:0:70,80:2504,2754:-426.446,-222.769,-201.697,-204.027,0,-179.944	1/2:178:0,96,82:0:0:96,82:3433,2866:-512.104,-232.888,-203.99,-279.568,0,-254.883	1/2:12:0,3,9:0:0:3,9:108,308:-33.795,-24.9772,-24.0741,-9.17208,0,-6.46281	1/2:152:0,69,83:0:0:69,83:2461,2872:-430.629,-230.772,-210.001,-200.206,0,-175.221	1/2:148:0,72,76:0:0:72,76:2546,2624:-417.991,-211.012,-189.338,-207.327,0,-184.448	1/2:406:0,223,180:0:0:223,180:7971,6275:-1155.4,-506.272,-439.142,-649.182,0,-594.996	1/2:396:0,174,221:0:0:174,221:6210,7725:-1129.33,-624.847,-572.468,-504.55,0,-438.023	1/2:115:0,44,70:0:0:44,70:1580,2436:-324.824,-195.999,-182.753,-128.867,0,-107.795	1/2:198:0,70,127:0:0:70,127:2493,4418:-553.26,-353.321,-332.249,-200,0,-161.769	1/2:23:0,15,8:0:0:15,8:530,276:-65.4167,-22.6259,-18.1104,-43.1363,0,-40.7281	1/2:260:0,124,135:0:0:124,135:4425,4722:-740.912,-380.22,-342.893,-360.684,0,-320.045	1/2:167:0,100,67:0:0:100,67:3573,2321:-477.658,-186.547,-156.444,-291.459,0,-271.29	1/2:321:0,103,218:0:0:103,218:3681,7635:-918.447,-618.401,-587.395,-300.4,0,-234.776	1/2:198:0,116,80:0:0:116,80:4145,2763:-561.304,-223.428,-188.509,-337.906,0,-313.824	1/2:143:0,29,114:0:0:29,114:1040,4015:-409.654,-324.827,-316.097,-85.1841,0,-50.8667	1/2:139:0,104,34:0:0:104,34:3731,1180:-400.041,-95.7054,-64.3982,-304.461,0,-294.226	1/2:360:0,163,194:0:0:163,194:5776,6739:-1014.6,-544.136,-495.068,-470.484,0,-412.084	1/2:51:0,27,24:0:0:27,24:968,822:-144.571,-66.5412,-58.4134,-78.3764,0,-71.1517	1/2:139:0,93,46:0:0:93,46:3340,1573:-399.219,-126.93,-98.9347,-272.634,0,-258.787	1/2:187:0,75,110:0:0:75,110:2688,3813:-525.447,-307.374,-284.796,-218.111,0,-184.997	1/2:102:0,62,39:0:0:62,39:2220,1342:-289.742,-108.718,-90.0542,-181.1,0,-169.36	1/2:182:0,92,87:0:0:92,87:3304,3018:-514.003,-244.572,-216.877,-269.506,0,-243.316	1/2:108:1,75,32:1:36:75,32:2669,1102:-303.528,-86.341,-66.7017,-214.538,0,-207.842	1/2:264:0,86,177:0:0:86,177:3038,6173:-744.894,-497.537,-471.649,-247.395,0,-194.112	1/2:339:0,124,215:0:0:124,215:4460,7546:-973.083,-609.642,-572.314,-363.797,0,-299.076
chr08	5302741	.	T	C	128757	PASS	AB=0.486078;ABP=7.90787;AC=152;AF=0.808511;AN=188;AO=5700;CIGAR=1X;DP=7204;DPB=7204;DPRA=0;EPP=11021.5;EPPR=3251.53;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.4216;MQMR=59.8884;NS=94;NUMALT=1;ODDS=4.29155;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=203628;QR=53560;RO=1496;RPL=161;RPP=11021.5;RPPR=3251.53;RPR=5539;RUN=1;SAF=5700;SAP=12380.4;SAR=0;SRF=1496;SRP=3251.53;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:72:0,72:0:0:72:2551:-229.701,-21.6742,0	1/1:34:0,33:0:0:33:1173:-105.487,-9.93399,0	0/1:131:50,81:50:1792:81:2892:-220.502,0,-122.128	1/1:360:0,360:0:0:360:12871:-1157.21,-108.371,0	0/1:40:25,15:25:900:15:536:-36.5172,0,-69.2752	0/1:83:60,22:60:2160:22:792:-46.5614,0,-169.129	1/1:46:0,46:0:0:46:1644:-148.234,-13.8474,0	1/1:125:0,125:0:0:125:4475:-402.639,-37.6288,0	1/1:78:0,78:0:0:78:2767:-249.241,-23.4803,0	1/1:49:0,49:0:0:49:1764:-158.948,-14.7505,0	1/1:37:0,37:0:0:37:1323:-119.367,-11.1381,0	1/1:47:0,47:0:0:47:1655:-148.894,-14.1484,0	1/1:45:0,45:0:0:45:1612:-145.334,-13.5464,0	1/1:40:0,40:0:0:40:1432:-129.171,-12.0412,0	1/1:44:0,44:0:0:44:1584:-141.806,-13.2453,0	1/1:48:0,48:0:0:48:1720:-155.06,-14.4494,0	1/1:21:0,21:0:0:21:756:-67.8753,-6.32163,0	1/1:17:0,17:0:0:17:612:-55.3958,-5.11751,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:91:0,91:0:0:91:3260:-293.611,-27.3937,0	1/1:77:0,77:0:0:77:2740:-246.229,-23.1793,0	0/1:67:36,31:36:1292:31:1116:-80.5747,0,-96.4148	1/1:168:0,168:0:0:168:6012:-541.118,-50.573,0	0/1:56:29,27:29:1036:27:960:-69.8486,0,-76.6961	1/1:92:0,92:0:0:92:3288:-296.099,-27.6948,0	0/1:219:102,116:102:3656:116:4160:-308.749,0,-263.189	0/1:137:75,62:75:2673:62:2204:-157.377,0,-199.573	1/1:14:0,14:0:0:14:504:-45.6935,-4.21442,0	1/1:188:0,188:0:0:188:6699:-602.87,-56.5936,0	1/1:175:2,173:2:72:173:6177:-548.448,-45.8435,0	0/1:144:83,61:83:2972:61:2179:-153.026,0,-224.364	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	1/1:21:0,21:0:0:21:748:-67.507,-6.32163,0	0/1:9:8,1:8:284:1:36:-0.889005,0,-23.1941	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:48:0,48:0:0:48:1728:-155.494,-14.4494,0	1/1:110:0,110:0:0:110:3932:-353.911,-33.1133,0	0/1:188:63,125:63:2264:125:4469:-345.748,0,-147.414	0/1:35:19,16:19:676:16:559:-40.1006,0,-50.6319	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:96:40,56:40:1432:56:2008:-152.067,0,-100.279	0/1:26:15,11:15:536:11:392:-27.7933,0,-40.748	0/1:107:60,47:60:2145:47:1688:-119.976,0,-161.088	0/1:27:17,10:17:612:10:360:-24.4248,0,-47.2856	1/1:32:0,32:0:0:32:1139:-102.788,-9.63296,0	0/1:135:90,45:90:3228:45:1604:-102.88,0,-248.653	0/1:92:43,49:43:1536:49:1756:-130.623,0,-110.838	0/1:166:80,86:80:2868:86:3048:-224.372,0,-208.386	1/1:73:0,73:0:0:73:2616:-235.624,-21.9752,0	1/1:107:0,107:0:0:107:3840:-345.783,-32.2102,0	1/1:94:0,94:0:0:94:3359:-302.517,-28.2968,0	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:115:52,63:52:1872:63:2260:-168.867,0,-134.141	0/1:88:50,38:50:1788:38:1364:-96.07,0,-134.654	0/1:18:8,10:8:284:10:356:-26.6644,0,-20.4848	0/1:126:62,64:62:2220:64:2285:-167.547,0,-162.135	0/1:50:22,28:22:792:28:1008:-75.9626,0,-56.546	1/1:25:0,25:0:0:25:887:-80.1419,-7.52575,0	0/1:29:7,21:7:252:21:756:-59.7207,0,-14.3714	1/1:97:0,97:0:0:97:3452:-310.718,-29.1999,0	1/1:69:0,69:0:0:69:2463:-221.9,-20.7711,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:87:57,30:57:2040:30:1063:-69.7351,0,-157.682	1/1:114:1,113:1:36:113:4056:-361.572,-30.7191,0	1/1:31:0,31:0:0:31:1108:-100.029,-9.33193,0	1/1:112:0,112:0:0:112:3991:-359.365,-33.7154,0	1/1:146:0,146:0:0:146:5216:-469.555,-43.9504,0	0/1:170:108,62:108:3810:62:2216:-148.506,0,-291.924	1/1:20:0,20:0:0:20:716:-64.7631,-6.0206,0	1/1:73:0,73:0:0:73:2600:-234.182,-21.9752,0	1/1:36:0,36:0:0:36:1279:-115.412,-10.8371,0	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:132:0,132:0:0:132:4685:-421.559,-39.736,0	0/1:54:23,31:23:824:31:1090:-82.0371,0,-58.2277	1/1:118:0,118:0:0:118:4220:-379.781,-35.5215,0	1/1:93:0,93:0:0:93:3336:-299.994,-27.9958,0	1/1:208:0,206:0:0:206:7377:-663.484,-62.0122,0	1/1:64:1,63:1:36:63:2252:-199.327,-15.6676,0	0/1:34:19,15:19:680:15:540:-38.7015,0,-51.2941	1/1:67:0,67:0:0:67:2400:-216.219,-20.169,0	0/1:109:43,65:43:1548:65:2324:-176.533,0,-106.742	1/1:139:0,138:0:0:138:4931:-443.184,-41.5421,0	1/1:49:0,49:0:0:49:1764:-159.037,-14.7505,0	1/1:28:0,28:0:0:28:995:-89.8269,-8.42884,0	0/1:26:12,14:12:432:14:504:-37.8713,0,-31.3944	1/1:66:0,66:0:0:66:2344:-211.18,-19.868,0	1/1:10:0,10:0:0:10:360:-32.7361,-3.0103,0	0/1:56:39,17:39:1400:17:612:-38.5558,0,-109.442	1/1:44:0,44:0:0:44:1549:-139.668,-13.2453,0	0/1:32:16,16:16:576:16:567:-41.7278,0,-42.542	0/1:97:42,55:42:1504:55:1972:-148.555,0,-106.455	0/1:48:31,17:31:1116:17:604:-40.2412,0,-86.3023	1/1:62:1,61:1:36:61:2160:-191.04,-15.0656,0	1/1:69:0,69:0:0:69:2454:-221.1,-20.7711,0
chr08	5435311	.	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chr08	5435341	.	T	C	221032	PASS	AB=0.47997;ABP=16.7549;AC=153;AF=0.81383;AN=188;AO=8847;CIGAR=1X;DP=10921;DPB=10921;DPRA=0;EPP=10204.7;EPPR=1406.21;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.9854;MQMR=59.9923;NS=94;NUMALT=1;ODDS=4.50363;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=314666;QR=74003;RO=2068;RPL=7647;RPP=10204.7;RPPR=1406.21;RPR=1200;RUN=1;SAF=8847;SAP=19214;SAR=0;SRF=2068;SRP=4493.62;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:44:0,44:0:0:44:1557:-140.421,-13.2453,0	1/1:227:0,227:0:0:227:8080:-727.22,-68.3338,0	0/1:139:66,73:66:2359:73:2602:-192.586,0,-170.725	1/1:281:0,281:0:0:281:9989:-898.953,-84.5894,0	0/1:116:52,64:52:1864:64:2287:-171.172,0,-133.12	0/1:39:26,13:26:936:13:464:-30.3573,0,-72.8193	1/1:146:0,146:0:0:146:5194:-467.598,-43.9504,0	1/1:152:0,152:0:0:152:5429:-488.739,-45.7566,0	1/1:110:0,110:0:0:110:3918:-352.809,-33.1133,0	1/1:152:0,150:0:0:150:5351:-481.355,-45.1545,0	1/1:56:0,56:0:0:56:1976:-178.112,-16.8577,0	1/1:78:0,78:0:0:78:2720:-245.034,-23.4803,0	1/1:80:0,80:0:0:80:2829:-254.846,-24.0824,0	1/1:121:1,120:1:36:120:4251:-379.172,-32.8264,0	1/1:88:0,88:0:0:88:3114:-280.488,-26.4906,0	1/1:82:0,82:0:0:82:2918:-262.855,-24.6845,0	1/1:91:0,91:0:0:91:3241:-291.911,-27.3937,0	1/1:81:0,81:0:0:81:2877:-259.166,-24.3834,0	1/1:38:0,38:0:0:38:1349:-121.708,-11.4391,0	1/1:220:0,220:0:0:220:7851:-706.62,-66.2266,0	1/1:210:0,210:0:0:210:7469:-672.258,-63.2163,0	0/1:109:81,28:81:2904:28:1004:-57.8636,0,-228.783	1/1:85:0,85:0:0:85:3018:-271.851,-25.5876,0	0/1:224:104,120:104:3728:120:4271:-317.139,0,-268.289	1/1:85:0,85:0:0:85:3018:-271.851,-25.5876,0	0/1:392:225,167:225:8072:167:5972:-419.584,0,-608.492	0/1:145:91,54:91:3257:54:1927:-130.057,0,-249.697	1/1:83:0,83:0:0:83:2898:-261.05,-24.9855,0	1/1:264:0,264:0:0:264:9427:-848.392,-79.4719,0	1/1:238:9,229:9:324:229:8121:-701.406,-42.1393,0	0/1:147:78,69:78:2792:69:2467:-178.032,0,-207.269	0/1:10:2,8:2:72:8:284:-22.8931,0,-3.82642	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:245:0,245:0:0:245:8743:-786.86,-73.7524,0	0/1:202:101,101:101:3628:101:3607:-264.028,0,-265.916	0/1:62:33,29:33:1165:29:1022:-73.627,0,-86.4911	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/1:137:58,79:58:2079:79:2823:-213.068,0,-146.138	0/1:37:14,23:14:504:23:809:-61.9902,0,-34.56	0/1:166:89,77:89:3184:77:2714:-194.531,0,-236.807	0/1:103:59,44:59:2096:44:1580:-111.485,0,-157.901	1/1:98:0,98:0:0:98:3452:-310.893,-29.5009,0	0/1:109:63,46:63:2247:46:1642:-115.256,0,-169.681	0/1:130:64,66:64:2300:66:2357:-173.254,0,-168.127	0/1:217:123,94:123:4404:94:3362:-237.473,0,-331.209	1/1:149:1,148:1:36:148:5268:-470.659,-41.2552,0	1/1:162:0,162:0:0:162:5760:-518.506,-48.7669,0	1/1:171:1,170:1:32:170:6032:-539.788,-48.2768,0	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/1:124:45,78:45:1616:78:2802:-215.182,0,-108.491	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/1:143:71,72:71:2552:72:2567:-188.232,0,-186.883	0/1:55:18,37:18:648:37:1305:-101.194,0,-42.0952	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:15:4,11:4:144:11:396:-31.4673,0,-8.79817	1/1:81:0,81:0:0:81:2882:-259.616,-24.3834,0	1/1:110:0,110:0:0:110:3891:-350.383,-33.1133,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:309:137,172:137:4908:172:6109:-456.892,0,-348.853	1/1:248:3,245:3:108:245:8678:-770.918,-64.5803,0	1/1:82:0,82:0:0:82:2936:-264.474,-24.6845,0	1/1:99:0,99:0:0:99:3509:-316.021,-29.802,0	1/1:212:0,212:0:0:212:7523:-677.118,-63.8184,0	0/1:134:84,50:84:2985:50:1784:-120.505,0,-228.542	1/1:45:0,45:0:0:45:1601:-144.378,-13.5464,0	1/1:133:0,133:0:0:133:4684:-421.719,-40.037,0	1/1:98:0,98:0:0:98:3481:-313.501,-29.5009,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:92:1,91:1:27:91:3231:-288.314,-24.995,0	0/1:81:41,40:41:1468:40:1428:-104.434,0,-108.033	1/1:181:1,180:1:36:180:6394:-571.952,-50.8882,0	1/1:218:0,217:0:0:217:7762:-698.249,-65.3235,0	1/1:67:0,66:0:0:66:2336:-210.138,-19.868,0	1/1:95:0,94:0:0:94:3334:-299.919,-28.2968,0	0/1:25:14,11:14:504:11:388:-27.7316,0,-38.1723	1/1:260:0,260:0:0:260:9265:-833.815,-78.2678,0	0/1:108:63,45:63:2264:45:1608:-112.499,0,-171.511	1/1:287:0,287:0:0:287:10225:-920.18,-86.3956,0	1/1:117:0,117:0:0:117:4179:-376.293,-35.2205,0	1/1:72:0,72:0:0:72:2561:-230.74,-21.6742,0	0/1:142:74,68:74:2636:68:2405:-173.957,0,-194.738	1/1:199:0,199:0:0:199:7117:-640.584,-59.905,0	1/1:36:0,36:0:0:36:1268:-114.42,-10.8371,0	0/1:89:48,41:48:1720:41:1456:-104.543,0,-128.294	1/1:88:0,88:0:0:88:3120:-281.027,-26.4906,0	0/1:35:19,16:19:676:16:572:-41.2774,0,-50.6319	0/1:92:37,55:37:1315:55:1944:-147.539,0,-90.9563	0/1:75:51,24:51:1805:24:856:-54.7839,0,-140.153	1/1:92:0,92:0:0:92:3268:-294.34,-27.6948,0	1/1:158:1,157:1:32:157:5597:-500.641,-44.3634,0
chr08	5435351	.	C	T	34752.3	PASS	AB=0.518207;ABP=14.3178;AC=35;AF=0.18617;AN=188;AO=2051;CIGAR=1X;DP=10917;DPB=10917;DPRA=1.12827;EPP=4448.02;EPPR=19246.6;GTI=0;LEN=1;MEANALT=1.06818;MQM=59.9927;MQMR=59.9822;NS=94;NUMALT=1;ODDS=3.15036;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73198;QR=314406;RO=8862;RPL=2050;RPP=4448.02;RPPR=19246.6;RPR=1;RUN=1;SAF=2051;SAP=4456.7;SAR=0;SRF=8862;SRP=19246.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:45:45,0:45:1603:0:0:0,-13.5463,-144.559	0/0:229:229,0:229:8150:0:0:0,-68.9359,-733.515	0/1:143:78,65:78:2719:65:2313:-165.381,0,-201.902	0/0:278:278,0:278:9865:0:0:0,-83.6863,-887.799	0/1:119:64,55:64:2287:55:1971:-141.842,0,-170.268	0/1:40:14,26:14:500:26:936:-72.5183,0,-33.295	0/0:147:147,0:147:5260:0:0:0,-44.2514,-473.536	0/0:155:155,0:155:5505:0:0:0,-46.6596,-495.574	0/0:112:112,0:112:3973:0:0:0,-33.7154,-357.756	0/0:152:150,2:150:5321:2:72:0,-38.9198,-472.171	0/0:55:55,0:55:1944:0:0:0,-16.5566,-175.234	0/0:78:78,0:78:2750:0:0:0,-23.4803,-247.733	0/0:80:80,0:80:2842:0:0:0,-24.0824,-256.018	0/0:121:121,0:121:4296:0:0:0,-36.4246,-386.818	0/0:88:88,0:88:3060:0:0:0,-26.4906,-275.628	0/0:82:82,0:82:2905:0:0:0,-24.6845,-261.686	0/0:92:92,0:92:3276:0:0:0,-27.6948,-295.059	0/0:81:81,0:81:2886:0:0:0,-24.3834,-259.976	0/0:38:38,0:38:1355:0:0:0,-11.4391,-122.25	0/0:218:217,1:217:7691:1:36:0,-62.0263,-688.631	0/0:210:210,0:210:7508:0:0:0,-63.2163,-675.758	0/1:110:28,82:28:995:82:2940:-231.721,0,-56.7507	0/0:87:87,0:87:3081:0:0:0,-26.1896,-277.516	0/1:224:119,105:119:4216:105:3730:-268.47,0,-312.189	0/0:87:86,1:86:3054:1:36:0,-22.5913,-271.489	0/1:393:166,227:166:5931:227:8094:-610.174,0,-415.594	0/1:143:52,91:52:1845:91:3268:-251.29,0,-123.281	0/0:82:82,0:82:2901:0:0:0,-24.6845,-261.32	0/0:263:263,0:263:9390:0:0:0,-79.1709,-845.062	0/0:238:232,6:232:8237:6:216:0,-51.8546,-721.545	0/1:146:68,78:68:2411:78:2768:-205.409,0,-173.294	0/1:10:8,2:8:270:2:72:-3.82642,0,-21.6174	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:5:5,0:5:171:0:0:0,-1.50515,-15.7255	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:244:244,0:244:8629:0:0:0,-73.4513,-776.613	0/1:201:102,99:102:3628:99:3552:-259.381,0,-266.218	0/1:60:28,32:28:972:32:1135:-84.3963,0,-69.7274	0/0:5:5,0:5:165:0:0:0,-1.50515,-15.1736	0/1:138:79,59:79:2828:59:2108:-148.446,0,-213.217	0/1:39:25,14:25:863:14:500:-33.596,0,-66.2412	0/1:165:73,92:73:2583:92:3292:-246.823,0,-183.047	0/1:102:44,58:44:1561:58:2075:-156.315,0,-110.075	0/0:98:98,0:98:3441:0:0:0,-29.5009,-309.901	0/1:110:47,63:47:1684:63:2247:-169.38,0,-118.734	0/1:130:67,63:67:2388:63:2254:-163.988,0,-176.041	0/1:214:94,120:94:3356:120:4263:-319.428,0,-237.834	0/0:148:147,1:147:5246:1:32:0,-41.3531,-469.078	0/0:160:160,0:160:5670:0:0:0,-48.1648,-510.334	0/0:174:172,1:172:6115:1:36:0,-48.8397,-546.854	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/1:122:78,44:78:2772:44:1574:-105.226,0,-212.994	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/1:8:3,5:3:104:5:180:-14.1438,0,-7.29457	0/1:140:70,70:70:2478:70:2503:-183.378,0,-181.127	0/1:55:37,18:37:1287:18:639:-41.2816,0,-99.5706	0/0:23:23,0:23:789:0:0:0,-6.92369,-71.3215	0/1:17:12,5:12:428:5:180:-11.4346,0,-33.7413	0/0:81:81,0:81:2900:0:0:0,-24.3834,-261.236	0/0:112:112,0:112:3961:0:0:0,-33.7154,-356.681	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:306:173,133:173:6166:133:4759:-336.352,0,-462.92	0/0:246:244,2:244:8699:2:72:0,-67.2167,-776.063	0/0:84:84,0:84:2989:0:0:0,-25.2865,-269.241	0/0:101:101,0:101:3592:0:0:0,-30.404,-323.486	0/0:208:208,0:208:7408:0:0:0,-62.6142,-666.769	0/1:133:50,83:50:1756:83:2910:-222.097,0,-118.284	0/0:45:45,0:45:1569:0:0:0,-13.5463,-141.496	0/0:137:137,0:137:4857:0:0:0,-41.2411,-437.284	0/0:99:99,0:99:3482:0:0:0,-29.802,-313.59	0/0:6:5,0:5:180:0:0:0,-1.50515,-16.1922	0/0:92:92,0:92:3291:0:0:0,-27.6948,-296.409	0/1:79:40,39:40:1423:39:1404:-102.878,0,-104.585	0/0:178:176,1:176:6281:1:36:0,-50.0439,-561.777	0/0:220:220,0:220:7743:0:0:0,-66.2266,-696.902	0/0:71:70,1:70:2430:1:36:0,-17.7749,-215.352	0/0:95:95,0:95:3399:0:0:0,-28.5978,-305.348	0/1:24:10,13:10:337:13:468:-35.1761,0,-23.3733	0/0:256:256,0:256:9160:0:0:0,-77.0637,-824.369	0/1:103:43,60:43:1544:60:2143:-162.131,0,-108.247	0/0:285:285,0:285:10136:0:0:0,-85.7935,-912.171	0/0:120:120,0:120:4240:0:0:0,-36.1236,-381.78	0/0:73:73,0:73:2573:0:0:0,-21.9752,-231.817	0/1:143:70,73:70:2452:73:2605:-191.651,0,-177.885	0/0:198:198,0:198:6950:0:0:0,-59.6039,-625.573	0/0:37:37,0:37:1306:0:0:0,-11.1381,-117.84	0/1:88:41,47:41:1472:47:1679:-124.906,0,-106.285	0/0:87:87,0:87:3082:0:0:0,-26.1896,-277.609	0/1:35:16,19:16:546:19:684:-51.3543,0,-38.9232	0/1:92:56,36:56:1961:36:1292:-88.889,0,-149.066	0/1:71:22,49:22:788:49:1728:-134.429,0,-49.8717	0/0:93:93,0:93:3257:0:0:0,-27.9958,-293.349	0/0:157:157,0:157:5567:0:0:0,-47.2617,-501.146
chr08	5588344	.	C	T	184268	PASS	AB=0.494194;ABP=4.27102;AC=152;AF=0.808511;AN=188;AO=8583;CIGAR=1X;DP=10786;DPB=10786;DPRA=0;EPP=18458.8;EPPR=4726.1;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.6038;MQMR=59.9436;NS=94;NUMALT=1;ODDS=2.41878;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304936;QR=76483;RO=2199;RPL=8563;RPP=18467.4;RPPR=4734.75;RPR=20;RUN=1;SAF=8582;SAP=18632.1;SAR=1;SRF=2198;SRP=4769.4;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:55:0,55:0:0:55:1938:-174.667,-16.5567,0	1/1:195:1,193:1:36:193:6878:-615.461,-55.1411,0	0/1:315:143,172:143:4912:172:6130:-456.922,0,-347.398	1/1:286:0,286:0:0:286:10204:-917.564,-86.0946,0	0/1:82:38,44:38:1331:44:1580:-117.798,0,-95.4018	0/1:70:24,46:24:860:46:1631:-125.986,0,-56.6497	1/1:150:0,150:0:0:150:5344:-481.077,-45.1545,0	1/1:167:0,167:0:0:167:5924:-533.24,-50.272,0	1/1:114:0,114:0:0:114:4058:-365.295,-34.3174,0	1/1:141:1,139:1:36:139:4965:-443.34,-38.9058,0	1/1:57:0,57:0:0:57:2031:-183.022,-17.1587,0	1/1:89:0,89:0:0:89:3164:-284.947,-26.7917,0	1/1:68:0,68:0:0:68:2424:-218.316,-20.47,0	1/1:48:0,48:0:0:48:1720:-155.071,-14.4494,0	1/1:70:0,70:0:0:70:2507:-225.865,-21.0721,0	1/1:55:0,55:0:0:55:1944:-175.211,-16.5567,0	1/1:60:0,59:0:0:59:2104:-189.409,-17.7608,0	1/1:59:0,59:0:0:59:2098:-189.072,-17.7608,0	1/1:62:0,62:0:0:62:2200:-197.819,-18.6639,0	1/1:238:1,237:1:36:237:8413:-753.484,-68.0469,0	1/1:214:0,214:0:0:214:7604:-683.736,-64.4204,0	0/1:138:82,56:82:2832:56:1985:-137.357,0,-213.576	1/1:109:0,109:0:0:109:3892:-350.451,-32.8123,0	0/1:152:64,88:64:2221:88:3132:-236.337,0,-154.392	1/1:59:0,59:0:0:59:2104:-188.982,-17.7608,0	0/1:309:134,175:134:4683:175:6243:-468.929,0,-328.614	0/1:223:97,126:97:3401:126:4481:-336.295,0,-239.174	1/1:46:0,46:0:0:46:1636:-147.524,-13.8474,0	1/1:268:1,267:1:36:267:9484:-849.366,-77.0778,0	1/1:153:1,152:1:36:152:5402:-482.658,-42.4593,0	0/1:186:77,109:77:2689:109:3866:-291.858,0,-186.262	0/1:26:15,11:15:540:11:392:-27.7933,0,-41.1098	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:15:11,4:11:344:4:144:-8.79817,0,-26.7467	1/1:10:0,10:0:0:10:347:-31.5636,-3.0103,0	1/1:16:0,16:0:0:16:552:-49.9947,-4.81648,0	1/1:207:0,207:0:0:207:7381:-664.273,-62.3132,0	0/1:260:144,116:144:5036:116:4137:-294.176,0,-375.103	0/1:68:40,28:40:1366:28:977:-67.7672,0,-102.76	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:165:89,76:89:3106:76:2667:-190.561,0,-229.321	0/1:37:17,20:17:583:20:707:-52.8165,0,-41.6543	0/1:183:97,86:97:3383:86:3079:-222.235,0,-249.594	0/1:70:34,36:34:1171:36:1279:-94.3316,0,-84.6183	1/1:55:1,54:1:27:54:1918:-170.184,-13.8569,0	0/1:132:68,64:68:2336:64:2282:-165.674,0,-170.757	0/1:148:71,77:71:2491:77:2743:-202.362,0,-179.89	0/1:196:109,87:109:3780:87:3093:-219.589,0,-281.398	1/1:116:0,116:0:0:116:4098:-368.982,-34.9195,0	1/1:200:1,199:1:36:199:7064:-632.025,-56.6077,0	1/1:178:2,176:2:68:176:6243:-555.468,-47.1256,0	0/1:11:7,4:7:248:4:144:-10.0023,0,-19.3529	0/1:216:94,122:94:3294:122:4345:-326.104,0,-231.656	0/1:52:24,28:24:824:28:1000:-74.6618,0,-58.819	0/1:25:15,10:15:522:10:360:-25.2103,0,-39.7815	0/1:184:112,72:112:3897:72:2572:-176.339,0,-295.531	0/1:53:36,17:36:1261:17:584:-36.9237,0,-97.8358	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:17:9,8:9:324:8:288:-21.1499,0,-24.3883	1/1:88:0,88:0:0:88:3114:-280.422,-26.4906,0	1/1:133:0,133:0:0:133:4668:-420.227,-40.037,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:228:105,123:105:3656:123:4399:-327.444,0,-260.608	1/1:252:1,251:1:27:251:8879:-795.974,-73.1598,0	1/1:75:0,75:0:0:75:2665:-240.085,-22.5773,0	1/1:154:0,154:0:0:154:5458:-491.336,-46.3586,0	1/1:212:4,208:4:144:208:7391:-651.899,-50.5047,0	0/1:141:107,34:107:3780:34:1211:-66.7085,0,-297.939	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	1/1:80:0,80:0:0:80:2828:-254.618,-24.0824,0	1/1:61:0,61:0:0:61:2138:-192.686,-18.3628,0	1/1:12:0,12:0:0:12:432:-39.2188,-3.61236,0	1/1:95:0,95:0:0:95:3391:-305.274,-28.5979,0	0/1:72:24,48:24:842:48:1699:-131.51,0,-54.4229	1/1:170:0,169:0:0:169:5971:-536.926,-50.8741,0	1/1:193:1,192:1:27:192:6793:-608.724,-55.399,0	1/1:120:0,120:0:0:120:4260:-383.502,-36.1236,0	1/1:103:1,102:1:36:102:3641:-323.907,-27.4078,0	0/1:24:17,7:17:593:7:252:-15.796,0,-46.47	1/1:194:3,191:3:104:191:6779:-600.391,-48.697,0	0/1:156:84,72:84:2948:72:2564:-183.98,0,-218.594	1/1:321:0,321:0:0:321:11369:-1023,-96.6306,0	1/1:105:0,105:0:0:105:3729:-335.808,-31.6082,0	1/1:55:2,53:2:59:53:1874:-163.298,-10.9525,0	0/1:79:34,45:34:1122:45:1612:-121.584,0,-77.4923	1/1:131:0,131:0:0:131:4660:-419.506,-39.4349,0	1/1:35:0,35:0:0:35:1237:-111.63,-10.5361,0	0/1:69:31,38:31:1074:38:1340:-100.126,0,-76.1954	1/1:69:0,69:0:0:69:2455:-221.18,-20.7711,0	0/1:42:27,15:27:943:15:536:-35.9316,0,-72.5348	0/1:93:49,44:49:1667:44:1580:-114.387,0,-122.315	0/1:69:49,20:49:1715:20:712:-43.6356,0,-133.863	1/1:140:0,140:0:0:140:4936:-443.56,-42.1442,0	1/1:83:0,83:0:0:83:2941:-264.91,-24.9855,0
chr08	5616659	.	GGCAA	TGCAA,TGCAC	584990	PASS	AB=0.523517,0.468798;ABP=34.2627,58.0267;AC=158,30;AF=0.840426,0.159574;AN=188;AO=18488,3123;CIGAR=1X4M,1X3M1X;DP=21760;DPB=21759.6;DPRA=0,0.959744;EPP=40079.7,6784.52;EPPR=9.52472;GTI=0;LEN=1,5;MEANALT=2.78723,3.28846;MQM=59.8319,58.9459;MQMR=60;NS=94;NUMALT=2;ODDS=50.7443;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=1;QA=644616,106450;QR=92;RO=3;RPL=7290,1470;RPP=1796.81,26.2957;RPPR=9.52472;RPR=11198,1653;RUN=1,1;SAF=7294,1470;SAP=1789.47,26.2957;SAR=11194,1653;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:137:0,134,1:0:0:134,1:4661,36:-419.348,-40.338,0,-416.419,-37.3837,-416.118	1/1:284:0,284,0:0:0:284,0:9844,0:-885.933,-85.4925,0,-885.933,-85.4925,-885.933	1/2:361:0,175,185:0:0:175,185:6191,6351:-1019.72,-515.461,-462.78,-504.253,0,-448.562	1/1:439:0,436,1:0:0:436,1:15256,30:-1372.31,-131.249,0,-1369.91,-128.857,-1369.61	1/2:105:0,70,35:0:0:70,35:2452,1205:-296.873,-97.3581,-76.286,-199.859,0,-189.323	1/2:101:0,48,53:0:0:48,53:1697,1856:-289.531,-151.321,-136.871,-138.562,0,-122.608	1/1:264:0,261,0:0:0:261,0:9139,0:-822.129,-78.5688,0,-822.129,-78.5688,-822.129	1/1:296:0,291,2:0:0:291,2:10229,66:-920.219,-87.5997,0,-914.884,-82.2647,-914.282	1/1:284:0,282,0:0:0:282,0:9743,0:-876.503,-84.8905,0,-876.503,-84.8905,-876.503	1/1:178:0,176,0:0:0:176,0:6188,0:-556.664,-52.9813,0,-556.664,-52.9813,-556.664	1/1:248:0,245,0:0:0:245,0:8435,0:-758.845,-73.7524,0,-758.845,-73.7524,-758.845	1/1:189:0,187,0:0:0:187,0:6616,0:-595.162,-56.2926,0,-595.162,-56.2926,-595.162	1/1:185:0,184,0:0:0:184,0:6504,0:-585.074,-55.3895,0,-585.074,-55.3895,-585.074	1/1:176:0,175,0:0:0:175,0:5994,0:-539.363,-52.6803,0,-539.363,-52.6803,-539.363	1/1:194:0,192,0:0:0:192,0:6741,0:-606.414,-57.7978,0,-606.414,-57.7978,-606.414	1/1:158:0,156,0:0:0:156,0:5447,0:-490.004,-46.9607,0,-490.004,-46.9607,-490.004	1/1:107:0,107,0:0:0:107,0:3701,0:-333.024,-32.2102,0,-333.024,-32.2102,-333.024	1/1:87:0,85,0:0:0:85,0:2975,0:-267.596,-25.5876,0,-267.596,-25.5876,-267.596	1/1:167:0,167,0:0:0:167,0:5802,0:-522.271,-50.272,0,-522.271,-50.272,-522.271	1/1:408:0,404,1:0:0:404,1:14157,33:-1273.57,-121.616,0,-1270.9,-118.95,-1270.6	1/1:325:0,324,1:0:0:324,1:11279,30:-1014.72,-97.5337,0,-1012.32,-94.8352,-1012.02	1/2:132:0,65,67:0:0:65,67:2286,2258:-369.032,-182.942,-163.375,-186.434,0,-166.265	1/1:262:0,261,0:0:0:261,0:9076,0:-816.589,-78.5688,0,-816.589,-78.5688,-816.589	1/2:247:0,136,111:0:0:136,111:4738,3772:-691.303,-306.071,-265.13,-385.576,0,-352.162	1/1:157:0,157,0:0:0:157,0:5532,0:-498.004,-47.2617,0,-498.004,-47.2617,-498.004	1/2:538:0,280,251:0:0:280,251:9804,8499:-1486.05,-688.635,-604.347,-797.411,0,-721.853	1/2:445:0,227,216:0:0:227,216:8003,7400:-1251.97,-600.422,-532.088,-651.681,0,-586.659	1/1:92:0,90,0:0:0:90,0:3148,0:-283.191,-27.0927,0,-283.191,-27.0927,-283.191	1/1:457:0,455,0:0:0:455,0:15970,0:-1436.71,-136.969,0,-1436.71,-136.969,-1436.71	1/1:222:0,214,8:0:0:214,8:7432,277:-668.576,-64.4204,0,-646.064,-41.5626,-643.656	1/2:363:0,176,186:0:0:176,186:6139,6301:-1009.91,-510.63,-457.648,-499.261,0,-443.269	1/1:161:0,155,4:0:0:155,4:5312,137:-477.89,-46.6597,0,-466.769,-35.5335,-465.564	1/1:387:0,386,0:0:0:386,0:13357,0:-1201.2,-116.198,0,-1201.2,-116.198,-1201.2	1/1:232:0,227,4:0:0:227,4:7829,136:-704.187,-68.3338,0,-693.155,-57.2063,-691.951	1/1:294:0,294,0:0:0:294,0:10063,0:-905.418,-88.5028,0,-905.418,-88.5028,-905.418	1/1:354:0,353,0:0:0:353,0:12196,0:-1096.82,-106.264,0,-1096.82,-106.264,-1096.82	1/1:406:0,401,1:0:0:401,1:14021,24:-1261.12,-120.713,0,-1259.26,-118.868,-1258.96	1/2:196:0,99,95:0:0:99,95:3485,3214:-544.132,-260.421,-230.619,-283.764,0,-255.166	1/2:191:0,142,48:0:0:142,48:4916,1649:-533.233,-133.746,-90.9999,-399.56,0,-385.11	1/1:121:0,120,0:0:0:120,0:4146,0:-372.866,-36.1236,0,-372.866,-36.1236,-372.866	1/2:216:0,112,101:0:0:112,101:3933,3427:-597.863,-277.757,-244.041,-320.092,0,-289.688	1/2:100:0,70,30:0:0:70,30:2409,1026:-279.251,-83.6017,-62.5296,-195.992,0,-186.961	1/2:268:0,164,101:0:0:164,101:5743,3423:-744.773,-277.564,-228.195,-467.257,0,-436.853	1/2:203:0,105,97:0:0:105,97:3617,3320:-563.185,-269.4,-237.791,-293.769,0,-264.569	1/1:146:0,144,0:0:0:144,0:5068,0:-455.902,-43.3483,0,-455.902,-43.3483,-455.902	1/2:169:0,94,75:0:0:94,75:3282,2569:-475.321,-208.636,-180.34,-267.03,0,-244.452	1/2:219:0,118,98:0:0:118,98:4136,3347:-607.75,-271.22,-235.698,-336.539,0,-307.038	1/2:280:0,149,129:0:0:149,129:5199,4338:-774.14,-351.287,-306.433,-422.89,0,-384.057	1/1:242:0,240,0:0:0:240,0:8427,0:-758.125,-72.2472,0,-758.125,-72.2472,-758.125	1/1:259:0,257,0:0:0:257,0:9005,0:-810.012,-77.3647,0,-810.012,-77.3647,-810.012	1/1:234:0,233,0:0:0:233,0:8101,0:-728.772,-70.14,0,-728.772,-70.14,-728.772	1/1:115:0,110,5:0:0:110,5:3792,174:-341.126,-33.1133,0,-326.979,-18.6178,-325.473	1/2:178:0,100,71:0:0:100,71:3540,2462:-488.382,-200.064,-169.961,-288.32,0,-266.946	1/2:104:0,57,45:0:0:57,45:2026,1524:-288.637,-123.531,-106.373,-165.093,0,-151.546	1/1:233:0,228,3:0:0:228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chr08	5619792	.	CACCAT	CCCAT	24778.3	PASS	AB=0.522719;ABP=15.9359;AC=36;AF=0.191489;AN=188;AO=1520;CIGAR=1M1D4M;DP=7990;DPB=7735.33;DPRA=1.06543;EPP=3303.65;EPPR=13770.9;GTI=1;LEN=1;MEANALT=1.39024;MQM=59.9316;MQMR=59.9831;NS=94;NUMALT=1;ODDS=1.22649;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=53165;QR=221239;RO=6432;RPL=0;RPP=3303.65;RPPR=13770.9;RPR=1520;RUN=1;SAF=1520;SAP=3303.65;SAR=0;SRF=6432;SRP=13969.9;SRR=0;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/0:55:55,0:55:1868:0:0:0,-16.5566,-168.399	0/0:82:82,0:82:2808:0:0:0,-24.6845,-252.966	0/1:131:72,58:72:2477:58:2025:-143.116,0,-183.781	0/0:152:150,1:150:5077:1:36:0,-42.2171,-453.5	0/1:66:31,35:31:1056:35:1214:-89.6936,0,-75.4758	0/1:35:26,9:26:896:9:302:-16.9691,0,-70.4167	0/0:96:96,0:96:3297:0:0:0,-28.8989,-296.495	0/0:111:109,0:109:3723:0:0:0,-32.8123,-334.985	0/0:114:112,0:112:3831:0:0:0,-33.7154,-344.64	0/0:94:94,0:94:3242:0:0:0,-28.2968,-292.007	0/0:54:54,0:54:1848:0:0:0,-16.2556,-166.597	0/0:94:94,0:94:3231:0:0:0,-28.2968,-291.02	0/0:93:93,0:93:3182:0:0:0,-27.9958,-286.611	0/0:57:57,0:57:1993:0:0:0,-17.1587,-179.645	0/0:69:69,0:69:2411:0:0:0,-20.7711,-217.248	0/0:57:57,0:57:1957:0:0:0,-17.1587,-176.404	0/0:18:18,0:18:619:0:0:0,-5.41854,-56.0328	0/0:24:24,0:24:824:0:0:0,-7.22472,-74.475	0/0:36:36,0:36:1237:0:0:0,-10.8371,-111.632	0/0:230:230,0:230:7979:0:0:0,-69.2369,-718.167	0/0:118:117,0:117:4029:0:0:0,-35.2205,-362.455	0/1:48:20,26:20:705:26:899:-67.017,0,-49.5682	0/0:76:75,1:75:2564:1:36:0,-19.28,-227.414	0/1:57:26,31:26:899:31:1056:-78.1847,0,-64.0653	0/0:69:69,0:69:2377:0:0:0,-20.7711,-214.19	0/1:225:109,115:109:3754:115:4059:-297.712,0,-270.28	0/1:234:106,126:106:3651:126:4387:-324.815,0,-258.605	0/0:26:25,0:25:867:0:0:0,-7.52575,-77.9865	0/0:200:197,0:197:6784:0:0:0,-59.3029,-610.305	0/0:148:145,3:145:4938:3:108:0,-34.4773,-434.522	0/1:86:41,45:41:1408:45:1604:-118.758,0,-101.125	0/1:6:5,1:5:172:1:36:-1.79209,0,-14.0118	0/0:9:9,0:9:316:0:0:0,-2.70927,-28.7791	0/1:4:1,3:1:31:3:100:-8.12632,0,-1.89533	0/0:11:11,0:11:379:0:0:0,-3.31133,-34.4415	0/0:28:28,0:28:972:0:0:0,-8.42884,-87.7918	0/0:211:210,0:210:7275:0:0:0,-63.2163,-654.475	0/1:79:46,32:46:1568:32:1105:-75.9145,0,-117.569	0/1:37:18,18:18:605:18:605:-43.513,0,-43.57	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9447	0/1:170:86,84:86:2912:84:2916:-211.504,0,-211.146	0/1:36:14,22:14:492:22:788:-60.4077,0,-33.7754	0/1:113:64,49:64:2180:49:1718:-120.88,0,-162.449	0/1:62:29,33:29:1005:33:1141:-84.3211,0,-72.0969	0/0:48:48,0:48:1636:0:0:0,-14.4494,-147.525	0/1:133:58,75:58:1971:75:2659:-199.515,0,-137.626	0/1:75:40,35:40:1375:35:1236:-88.9564,0,-101.469	0/1:108:52,54:52:1830:54:1897:-138.737,0,-132.713	0/0:96:96,0:96:3320:0:0:0,-28.8989,-299.027	0/0:120:120,0:120:4175:0:0:0,-36.1236,-375.946	0/0:139:139,0:139:4752:0:0:0,-41.8432,-427.859	0/1:11:5,6:5:170:6:216:-16.4792,0,-12.3227	0/1:71:28,43:28:938:43:1519:-115.629,0,-63.3517	0/1:46:28,17:28:970:17:577:-38.3436,0,-73.7053	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/1:123:57,66:57:1925:66:2304:-170.588,0,-136.497	0/1:33:16,14:16:555:14:492:-35.2231,0,-40.8871	0/0:10:10,0:10:338:0:0:0,-3.0103,-30.7469	0/1:21:12,9:12:411:9:316:-22.4572,0,-30.9955	0/0:87:87,0:87:2995:0:0:0,-26.1896,-269.79	0/0:103:103,0:103:3620:0:0:0,-31.0061,-324.993	0/0:4:4,0:4:128:0:0:0,-1.20412,-11.8358	0/1:135:66,69:66:2269:69:2423:-177.688,0,-163.837	0/0:163:163,0:163:5609:0:0:0,-49.0679,-504.957	0/0:86:86,0:86:2978:0:0:0,-25.8886,-268.258	0/0:50:50,0:50:1690:0:0:0,-15.0515,-152.38	0/0:124:124,0:124:4265:0:0:0,-37.3277,-384.043	0/1:229:72,156:72:2497:156:5461:-422.634,0,-155.991	0/0:56:56,0:56:1905:0:0:0,-16.8577,-171.727	0/0:91:91,0:91:3111:0:0:0,-27.3937,-280.226	0/0:59:59,0:59:2043:0:0:0,-17.7608,-184.144	0/0:36:36,0:36:1201:0:0:0,-10.8371,-108.386	0/0:111:110,0:110:3787:0:0:0,-33.1133,-340.72	0/1:91:37,54:37:1216:54:1898:-143.703,0,-82.3379	0/0:130:129,1:129:4410:1:36:0,-35.5356,-393.492	0/0:139:139,0:139:4849:0:0:0,-41.8432,-436.58	0/0:96:95,0:95:3191:0:0:0,-28.5978,-287.061	0/0:104:103,1:103:3541:1:36:0,-27.7088,-315.31	0/0:8:8,0:8:264:0:0:0,-2.40824,-24.0818	0/0:112:109,1:109:3772:1:36:0,-29.8749,-336.093	0/1:103:47,55:47:1625:55:1936:-143.452,0,-115.472	0/0:192:190,0:190:6596:0:0:0,-57.1957,-593.386	0/0:58:58,0:58:1991:0:0:0,-17.4597,-179.465	0/0:69:69,0:69:2399:0:0:0,-20.7711,-216.169	0/1:44:22,22:22:765:22:784:-57.6386,0,-55.9242	0/0:128:127,0:127:4399:0:0:0,-38.2308,-395.737	0/0:23:23,0:23:795:0:0:0,-6.92369,-71.8661	0/1:51:25,26:25:877:26:902:-66.1403,0,-63.8946	0/0:73:72,0:72:2511:0:0:0,-21.6742,-225.887	0/1:58:26,32:26:896:32:1100:-81.8349,0,-63.4936	0/1:90:46,43:46:1595:43:1514:-109.399,0,-116.685	0/1:72:28,44:28:955:44:1512:-114.695,0,-64.5849	0/0:143:141,0:141:4766:0:0:0,-42.4452,-428.782	0/0:108:108,0:108:3783:0:0:0,-32.5112,-340.679
chr08	5781125	.	A	T	30128.8	PASS	AB=0.537323;ABP=42.2361;AC=36;AF=0.191489;AN=188;AO=1754;CIGAR=1X;DP=8108;DPB=8108;DPRA=1.19488;EPP=3811.77;EPPR=13781;GTI=0;LEN=1;MEANALT=1.07143;MQM=59.9732;MQMR=59.994;NS=94;NUMALT=1;ODDS=0.978699;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62830;QR=227265;RO=6345;RPL=1754;RPP=3811.77;RPPR=13781;RPR=0;RUN=1;SAF=0;SAP=3811.77;SAR=1754;SRF=0;SRP=13781;SRR=6345;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.993	0/0:87:87,0:87:3105:0:0:0,-26.1896,-279.676	0/1:159:88,71:88:3148:71:2525:-179.636,0,-235.682	0/0:123:123,0:123:4396:0:0:0,-37.0267,-395.814	0/1:34:14,20:14:504:20:720:-54.8938,0,-35.4631	0/1:44:23,21:23:824:21:756:-55.1219,0,-61.238	0/0:72:72,0:72:2576:0:0:0,-21.6742,-232.09	0/0:134:134,0:134:4792:0:0:0,-40.338,-431.437	0/0:86:86,0:86:3068:0:0:0,-25.8886,-276.35	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/0:89:89,0:89:3181:0:0:0,-26.7917,-286.512	0/0:99:99,0:99:3548:0:0:0,-29.802,-319.524	0/0:85:85,0:85:3035:0:0:0,-25.5875,-273.38	0/0:134:133,0:133:4760:0:0:0,-40.037,-428.235	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/0:82:81,0:81:2900:0:0:0,-24.3834,-260.876	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:58:58,0:58:2084:0:0:0,-17.4597,-187.83	0/0:91:91,0:91:3260:0:0:0,-27.3937,-293.621	0/0:152:151,0:151:5412:0:0:0,-45.4555,-486.885	0/1:96:24,72:24:856:72:2580:-203.55,0,-48.4622	0/0:50:50,0:50:1784:0:0:0,-15.0515,-160.843	0/1:38:23,15:23:828:15:536:-37.1357,0,-63.405	0/0:90:89,1:89:3177:1:36:0,-23.4944,-282.555	0/1:200:97,103:97:3480:103:3689:-272.005,0,-253.205	0/1:236:116,120:116:4156:120:4300:-316.133,0,-303.18	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:176:176,0:176:6320:0:0:0,-52.9813,-568.889	0/0:123:117,4:117:4200:4:144:0,-23.4708,-364.737	0/1:57:33,24:33:1184:24:864:-60.9239,0,-89.7096	0/1:4:2,2:2:68:2:72:-5.6326,0,-5.25359	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/1:5:4,1:4:140:1:36:-2.09312,0,-11.4394	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:193:193,0:193:6936:0:0:0,-58.0988,-624.302	0/1:204:96,108:96:3452:108:3872:-287.264,0,-249.481	0/1:58:31,27:31:1099:27:972:-70.3382,0,-81.7597	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:100:57,43:57:2032:43:1529:-107.798,0,-153.05	0/1:39:17,22:17:599:22:788:-59.5046,0,-42.4979	0/1:183:90,93:90:3224:93:3307:-242.745,0,-235.294	0/1:52:27,25:27:968:25:896:-65.3068,0,-71.7838	0/0:44:43,0:43:1540:0:0:0,-12.9443,-138.533	0/1:111:51,60:51:1828:60:2148:-160.173,0,-131.387	0/1:138:72,66:72:2584:66:2368:-171.836,0,-191.267	0/1:138:58,80:58:2080:80:2863:-216.365,0,-145.928	0/0:76:76,0:76:2724:0:0:0,-22.8783,-245.403	0/0:84:84,0:84:3024:0:0:0,-25.2865,-272.389	0/0:121:121,0:121:4336:0:0:0,-36.4246,-390.415	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:189:93,95:93:3344:95:3404:-249.49,0,-244.222	0/1:65:23,42:23:828:42:1496:-115.368,0,-55.2772	0/1:8:5,3:5:180:3:104:-7.29457,0,-14.1438	0/1:124:61,63:61:2192:63:2253:-165.703,0,-160.218	0/1:30:15,15:15:540:15:540:-39.9056,0,-39.9056	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:20:14,6:14:504:6:216:-13.7699,0,-39.6775	0/0:112:112,0:112:4024:0:0:0,-33.7154,-362.347	0/0:126:126,0:126:4524:0:0:0,-37.9298,-407.326	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:90:38,52:38:1364:52:1868:-141.307,0,-95.968	0/0:127:125,2:125:4464:2:72:0,-31.3941,-395.095	0/0:85:85,0:85:3033:0:0:0,-25.5875,-273.199	0/0:25:25,0:25:877:0:0:0,-7.52575,-79.2452	0/0:117:116,1:116:4160:1:36:0,-31.6222,-370.979	0/1:177:34,143:34:1220:143:5132:-408.738,0,-56.8245	0/0:77:77,0:77:2764:0:0:0,-23.1793,-249.001	0/0:50:50,0:50:1766:0:0:0,-15.0515,-159.219	0/0:70:70,0:70:2497:0:0:0,-21.0721,-224.981	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/0:137:137,0:137:4924:0:0:0,-41.2411,-443.308	0/1:64:24,39:24:860:39:1396:-106.614,0,-58.3972	0/0:164:163,0:163:5806:0:0:0,-49.0679,-522.294	0/0:147:147,0:147:5268:0:0:0,-44.2514,-474.256	0/0:147:144,3:144:5164:3:108:0,-34.1762,-454.824	0/0:78:78,0:78:2785:0:0:0,-23.4803,-250.889	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:71:71,0:71:2544:0:0:0,-21.3731,-229.211	0/1:76:28,48:28:1004:48:1728:-132.927,0,-67.7976	0/0:161:161,0:161:5768:0:0:0,-48.4658,-519.235	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/0:77:77,0:77:2772:0:0:0,-23.1793,-249.72	0/1:40:26,14:26:928:14:504:-33.6569,0,-71.7971	0/0:136:135,1:135:4825:1:36:0,-37.3418,-430.806	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:70:27,43:27:968:43:1544:-118.181,0,-66.3653	0/0:88:88,0:88:3151:0:0:0,-26.4906,-283.814	0/1:105:58,47:58:2080:47:1692:-120.959,0,-155.862	0/1:204:102,102:102:3649:102:3656:-267.834,0,-267.202	0/1:69:22,47:22:788:47:1684:-131.076,0,-50.4737	0/0:66:66,0:66:2360:0:0:0,-19.868,-212.659	0/0:90:90,0:90:3232:0:0:0,-27.0927,-291.101
chr08	5790870	.	G	A	347687	PASS	AB=0.475193;ABP=45.8886;AC=152;AF=0.808511;AN=188;AO=16470;CIGAR=1X;DP=20743;DPB=20743;DPRA=0;EPP=35758.5;EPPR=9277.37;GTI=0;LEN=1;MEANALT=1.02128;MQM=30.9529;MQMR=45.4685;NS=94;NUMALT=1;ODDS=1.57625;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=582613;QR=151430;RO=4271;RPL=8640;RPP=89.5132;RPPR=200.344;RPR=7830;RUN=1;SAF=8641;SAP=89.9409;SAR=7829;SRF=2447;SRP=200.344;SRR=1824;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:124:0,124:0:0:124:4404:-322.665,-37.3277,0	1/1:194:1,193:1:36:193:6860:-532.007,-54.8066,0	0/1:331:165,166:165:5859:166:5862:-346.197,0,-406.899	1/1:524:0,524:0:0:524:18514:-1359.22,-157.74,0	0/1:178:88,90:88:3148:90:3195:-181.68,0,-221.274	0/1:88:38,50:38:1348:50:1792:-92.0814,0,-84.1543	1/1:217:0,217:0:0:217:7720:-542.124,-65.3235,0	1/1:288:0,288:0:0:288:10125:-788.1,-86.6966,0	1/1:300:0,300:0:0:300:10637:-807.817,-90.309,0	1/1:287:1,286:1:36:286:10121:-724.955,-82.837,0	1/1:133:1,132:1:36:132:4676:-320.232,-36.6494,0	1/1:236:0,236:0:0:236:8377:-595.446,-71.0431,0	1/1:170:0,170:0:0:170:5997:-425.736,-51.1751,0	1/1:234:1,233:1:36:233:8221:-552.876,-67.142,0	1/1:135:0,135:0:0:135:4785:-330.84,-40.6391,0	1/1:189:2,187:2:72:187:6586:-457.835,-50.0693,0	1/1:97:0,97:0:0:97:3411:-247.615,-29.1999,0	1/1:73:0,73:0:0:73:2583:-188.256,-21.9752,0	1/1:72:0,72:0:0:72:2532:-177.014,-21.6742,0	1/1:504:1,503:1:36:503:17819:-1286.65,-148.332,0	1/1:531:1,530:1:36:530:18680:-1369.83,-156.256,0	0/1:195:139,56:139:4945:56:2004:-85.8659,0,-377.12	1/1:323:0,323:0:0:323:11490:-821.032,-97.2327,0	0/1:146:63,83:63:2228:83:2924:-156.817,0,-145.852	1/1:193:4,189:4:144:189:6703:-469.576,-44.8089,0	0/1:595:326,269:326:11540:269:9473:-532.709,0,-831.323	0/1:512:263,249:263:9310:249:8827:-489.356,0,-651.186	1/1:70:0,70:0:0:70:2446:-173.337,-21.0721,0	1/1:699:3,696:3:104:696:24602:-1797.72,-201.353,0	1/1:288:21,267:21:747:267:9408:-642.248,-23.07,0	0/1:265:130,135:130:4612:135:4722:-265.871,0,-320.091	0/1:12:5,7:5:180:7:243:-15.2108,0,-12.3702	1/1:26:0,26:0:0:26:920:-69.9674,-7.82678,0	0/1:8:3,5:3:108:5:180:-9.78656,0,-7.65741	1/1:11:0,11:0:0:11:392:-31.8145,-3.31133,0	1/1:22:0,22:0:0:22:776:-63.714,-6.62266,0	1/1:391:0,391:0:0:391:13828:-996.45,-117.703,0	0/1:310:170,140:170:6023:140:4967:-282.51,0,-435.396	0/1:123:64,59:64:2278:59:2085:-117.322,0,-154.735	1/1:8:0,8:0:0:8:284:-19.9376,-2.40824,0	0/1:417:215,202:215:7556:202:7168:-372.593,0,-518.159	0/1:62:20,42:20:677:42:1474:-85.4457,0,-39.8576	0/1:443:222,221:222:7865:221:7836:-427.983,0,-545.212	0/1:156:74,82:74:2620:82:2876:-158.132,0,-182.987	1/1:122:1,121:1:36:121:4260:-296.143,-33.3381,0	0/1:266:146,120:146:5210:120:4244:-236.041,0,-377.72	0/1:254:132,122:132:4675:122:4283:-247.809,0,-322.039	0/1:387:211,176:211:7503:176:6246:-342.126,0,-543.421	1/1:163:0,163:0:0:163:5735:-416.58,-49.0679,0	1/1:355:0,355:0:0:355:12538:-928.831,-106.866,0	1/1:172:1,171:1:36:171:6017:-409.788,-48.1907,0	0/1:23:12,11:12:432:11:358:-21.8195,0,-32.0177	0/1:216:94,122:94:3329:122:4284:-259.292,0,-222.84	0/1:199:89,110:89:3162:110:3923:-220.048,0,-217.465	0/1:27:13,14:13:464:14:487:-31.9254,0,-32.7913	0/1:324:176,148:176:6247:148:5225:-295.815,0,-437.218	0/1:186:86,100:86:3054:100:3549:-213.553,0,-211.767	1/1:25:0,25:0:0:25:865:-66.4405,-7.52575,0	0/1:24:13,11:13:460:11:396:-23.8064,0,-34.214	1/1:167:0,167:0:0:167:5927:-414.387,-50.272,0	1/1:202:2,199:2:68:199:7058:-472.636,-54.5977,0	1/1:15:0,15:0:0:15:536:-39.9759,-4.51545,0	0/1:360:166,194:166:5908:194:6877:-398.516,0,-408.023	1/1:378:2,376:2:72:376:13342:-958.765,-107.891,0	1/1:156:0,156:0:0:156:5555:-387.458,-46.9607,0	1/1:225:3,222:3:99:222:7890:-560.134,-59.0018,0	1/1:499:2,497:2:72:497:17755:-1382.39,-143.459,0	0/1:337:230,107:230:8187:107:3799:-176.268,0,-617.677	1/1:98:0,98:0:0:98:3458:-234.201,-29.5009,0	1/1:142:0,142:0:0:142:5031:-385.256,-42.7463,0	1/1:67:0,67:0:0:67:2357:-172.305,-20.169,0	1/1:57:0,57:0:0:57:2036:-144.643,-17.1587,0	1/1:197:2,195:2:72:195:6857:-490.496,-52.4855,0	0/1:227:133,94:133:4697:94:3270:-176.178,0,-326.813	1/1:465:2,463:2:68:463:16278:-1144.96,-133.808,0	1/1:358:2,356:2:72:356:12622:-919.159,-100.949,0	1/1:282:2,280:2:72:280:9882:-704.575,-78.5046,0	1/1:218:3,215:3:108:215:7611:-543.384,-55.5637,0	0/1:46:25,21:25:896:21:752:-47.7602,0,-64.1007	1/1:265:0,265:0:0:265:9366:-682.628,-79.773,0	0/1:277:143,134:143:5074:134:4736:-274.734,0,-347.754	1/1:565:1,563:1:36:563:19889:-1447.49,-166.681,0	1/1:104:0,104:0:0:104:3683:-260.984,-31.3071,0	1/1:169:2,167:2:68:167:5903:-389.002,-44.7083,0	0/1:125:70,55:70:2488:55:1942:-97.2066,0,-176.427	1/1:242:0,242:0:0:242:8603:-604.692,-72.8493,0	1/1:53:0,53:0:0:53:1871:-137.564,-15.9546,0	0/1:157:63,94:63:2199:94:3338:-192.257,0,-136.929	1/1:185:0,185:0:0:185:6540:-477.45,-55.6906,0	0/1:110:53,57:53:1870:57:2040:-115.429,0,-123.581	0/1:233:106,127:106:3749:127:4462:-232.087,0,-244.326	0/1:403:264,139:264:9367:139:4931:-270.367,0,-705.65	1/1:219:0,219:0:0:219:7767:-557.439,-65.9256,0	1/1:217:0,217:0:0:217:7714:-550.736,-65.3235,0
chr08	5850252	.	T	A	33046.3	PASS	AB=0.56566;ABP=208.895;AC=36;AF=0.191489;AN=188;AO=3127;CIGAR=1X;DP=12718;DPB=12718;DPRA=1.37667;EPP=6793.2;EPPR=20803.5;GTI=4;LEN=1;MEANALT=1.06977;MQM=29.047;MQMR=25.2235;NS=94;NUMALT=1;ODDS=1.29687;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=111958;QR=343500;RO=9587;RPL=3127;RPP=6793.2;RPPR=20803.5;RPR=0;RUN=1;SAF=3127;SAP=6793.2;SAR=0;SRF=9587;SRP=20820.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:30:30,0:30:1068:0:0:0,-9.0309,-66.7173	0/0:248:248,0:248:8884:0:0:0,-74.6554,-556.074	0/1:233:97,136:97:3460:136:4849:-272.171,0,-145.398	0/0:294:293,1:293:10515:1:36:0,-85.6817,-630.754	0/1:125:61,64:61:2176:64:2304:-123.91,0,-97.2637	0/1:126:47,78:47:1683:78:2799:-160.14,0,-68.2982	0/0:208:208,0:208:7463:0:0:0,-62.6142,-450.88	0/0:219:219,0:219:7839:0:0:0,-65.9256,-489.87	0/0:71:71,0:71:2544:0:0:0,-21.3731,-158.42	0/0:124:124,0:124:4440:0:0:0,-37.3277,-267.867	0/0:63:63,0:63:2260:0:0:0,-18.9649,-136.004	0/0:60:60,0:60:2152:0:0:0,-18.0618,-133.975	0/0:70:70,0:70:2512:0:0:0,-21.0721,-157.378	0/0:71:71,0:71:2530:0:0:0,-21.3731,-157.054	0/0:57:57,0:57:2024:0:0:0,-17.1587,-122.492	0/0:57:57,0:57:2052:0:0:0,-17.1587,-126.708	0/0:64:64,0:64:2300:0:0:0,-19.2659,-143.311	0/0:78:78,0:78:2799:0:0:0,-23.4803,-174.362	0/0:41:41,0:41:1476:0:0:0,-12.3422,-91.9594	0/0:401:401,0:401:14387:0:0:0,-120.713,-864.25	0/0:157:157,0:157:5630:0:0:0,-47.2617,-350.592	0/1:293:59,234:59:2116:234:8353:-502.321,0,-48.4795	0/0:171:171,0:171:6116:0:0:0,-51.4761,-368.781	0/1:145:72,73:72:2588:73:2620:-143.797,0,-116.665	0/0:73:73,0:73:2597:0:0:0,-21.9752,-167.073	0/1:449:193,256:193:6927:256:9132:-509.571,0,-310.633	0/1:420:210,210:210:7490:210:7532:-405.124,0,-340.915	0/0:36:36,0:36:1296:0:0:0,-10.8371,-80.9408	0/0:478:478,0:478:17139:0:0:0,-143.892,-1101.06	0/0:139:131,8:131:4704:8:273:0,-21.9954,-271.374	0/1:214:88,126:88:3151:126:4532:-255.727,0,-124.783	0/1:22:10,12:10:351:12:432:-24.1271,0,-15.4074	0/0:41:41,0:41:1464:0:0:0,-12.3422,-92.7648	0/1:26:14,12:14:504:12:428:-22.8346,0,-24.4268	0/0:26:26,0:26:932:0:0:0,-7.82678,-58.6297	0/0:38:38,0:38:1338:0:0:0,-11.4391,-83.6887	0/0:172:171,0:171:6116:0:0:0,-51.4761,-395.991	0/1:299:119,180:119:4272:180:6412:-363.894,0,-173.749	0/1:63:39,24:39:1400:24:864:-41.6944,0,-67.659	0/0:15:15,0:15:527:0:0:0,-4.51545,-33.3464	0/1:289:118,171:118:4224:171:6129:-341.579,0,-174.905	0/1:35:19,16:19:684:16:572:-30.2814,0,-31.5554	0/1:240:102,137:102:3656:137:4924:-274.706,0,-156.044	0/1:74:44,30:44:1580:30:1080:-54.0193,0,-71.5766	0/0:56:56,0:56:2012:0:0:0,-16.8577,-121.425	0/1:131:75,56:75:2700:56:2000:-102.834,0,-137.167	0/1:228:100,128:100:3588:128:4581:-253.914,0,-153.421	0/1:315:114,201:114:4077:201:7194:-414.033,0,-148.594	0/0:120:120,0:120:4312:0:0:0,-36.1236,-258.975	0/0:143:143,0:143:5136:0:0:0,-43.0473,-307.712	0/0:166:166,0:166:5952:0:0:0,-49.971,-380.089	0/1:16:7,8:7:248:8:288:-15.8445,0,-10.1652	0/1:233:107,126:107:3844:126:4536:-248.992,0,-167.497	0/1:98:33,65:33:1175:65:2328:-134.812,0,-47.2735	0/1:38:14,24:14:500:24:864:-49.7783,0,-20.819	0/1:196:95,101:95:3403:101:3621:-197.511,0,-152.582	0/1:62:27,35:27:972:35:1256:-70.3944,0,-39.4165	0/0:42:42,0:42:1499:0:0:0,-12.6433,-98.1179	0/1:34:17,17:17:603:17:612:-33.2096,0,-28.0367	0/0:103:103,0:103:3679:0:0:0,-31.0061,-230.361	0/0:76:76,0:76:2728:0:0:0,-22.8783,-162.254	0/0:31:31,0:31:1116:0:0:0,-9.33193,-66.7659	0/1:260:130,130:130:4668:130:4639:-250.037,0,-220.05	0/0:291:289,2:289:10358:2:72:0,-82.2397,-619.19	0/0:60:60,0:60:2156:0:0:0,-18.0618,-132.734	0/0:128:128,0:128:4580:0:0:0,-38.5318,-277.759	0/0:271:268,3:268:9597:3:108:0,-73.6801,-570.89	0/1:327:96,231:96:3456:231:8276:-485.028,0,-110.765	0/0:28:28,0:28:1004:0:0:0,-8.42884,-62.3714	0/0:106:106,0:106:3792:0:0:0,-31.9092,-237.751	0/0:68:68,0:68:2440:0:0:0,-20.47,-154.171	0/0:29:29,0:29:1040:0:0:0,-8.72987,-62.1506	0/0:134:134,0:134:4802:0:0:0,-40.338,-300.519	0/1:60:25,35:25:896:35:1256:-70.3333,0,-37.3113	0/0:187:187,0:187:6664:0:0:0,-56.2926,-414.729	0/0:290:290,0:290:10396:0:0:0,-87.2987,-620.672	0/0:100:99,1:99:3556:1:36:0,-27.2819,-217.851	0/0:137:136,1:136:4892:1:36:0,-38.42,-302.121	0/1:24:8,16:8:288:16:557:-32.7523,0,-10.7837	0/0:202:202,0:202:7252:0:0:0,-60.8081,-451.38	0/1:139:78,61:78:2772:61:2187:-111.099,0,-130.804	0/0:318:318,0:318:11420:0:0:0,-95.7275,-688.884	0/0:113:113,0:113:4060:0:0:0,-34.0164,-243.869	0/0:63:63,0:63:2259:0:0:0,-18.9649,-138.239	0/1:74:46,28:46:1647:28:1000:-48.2755,0,-78.0355	0/0:123:123,0:123:4386:0:0:0,-37.0267,-263.324	0/0:36:36,0:36:1292:0:0:0,-10.8371,-80.0489	0/1:58:26,32:26:932:32:1152:-63.2417,0,-41.4997	0/0:55:55,0:55:1937:0:0:0,-16.5566,-122.328	0/1:37:26,11:26:936:11:396:-16.2394,0,-46.7472	0/1:60:37,23:37:1328:23:828:-39.8838,0,-63.9521	0/1:55:32,23:32:1148:23:828:-42.8982,0,-51.9219	0/0:140:140,0:140:5015:0:0:0,-42.1442,-300.85	0/0:102:101,1:101:3621:1:36:0,-29.0104,-216.491
chr08	5850256	.	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chr08	6085898	.	TCTTGCT	TCTTT,TCTCT	115695	PASS	AB=0.524171,0.450237;ABP=13.7174,48.3951;AC=152,36;AF=0.808511,0.191489;AN=188;AO=4894,960;CIGAR=4M2D1M,3M2D2M;DP=5925;DPB=4222.57;DPRA=0,0.918199;EPP=10543.5,2087.62;EPPR=0;GTI=2;LEN=2,2;MEANALT=1.98936,2.88095;MQM=40.3271,34.2938;MQMR=0;NS=94;NUMALT=2;ODDS=1.29464;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=172154,32048;QR=0;RO=0;RPL=10,0;RPP=10543.5,2087.62;RPPR=0;RPR=4884,960;RUN=1,1;SAF=0,0;SAP=10630.2,2087.62;SAR=4894,960;SRF=0;SRP=0;SRR=0;TYPE=del,del	GT:DP:AD:RO:QR:AO:QA:GL	1/1:36:0,36,0:0:0:36,0:1260,0:-105.062,-10.8371,0,-105.062,-10.8371,-105.062	1/1:38:0,38,0:0:0:38,0:1303,0:-111.239,-11.4391,0,-111.239,-11.4391,-111.239	1/2:77:0,40,32:0:0:40,32:1411,987:-177.637,-70.9422,-58.901,-106.744,0,-97.1115	1/1:185:0,185,0:0:0:185,0:6537,0:-565.747,-55.6906,0,-565.747,-55.6906,-565.747	1/2:20:0,4,15:0:0:4,15:140,510:-48.2539,-37.3031,-36.0989,-10.9516,0,-6.43616	1/2:14:0,4,10:0:0:4,10:144,288:-31.4766,-20.4622,-19.2581,-11.33,0,-8.3197	1/1:71:0,71,0:0:0:71,0:2516,0:-218.036,-21.3731,0,-218.036,-21.3731,-218.036	1/1:120:0,119,0:0:0:119,0:4180,0:-349.599,-35.8226,0,-349.599,-35.8226,-349.599	1/1:90:0,90,0:0:0:90,0:3165,0:-266.221,-27.0927,0,-266.221,-27.0927,-266.221	1/1:45:0,45,0:0:0:45,0:1570,0:-136.659,-13.5464,0,-136.659,-13.5464,-136.659	1/1:44:0,43,0:0:0:43,0:1485,0:-129.933,-12.9443,0,-129.933,-12.9443,-129.933	1/1:60:0,60,0:0:0:60,0:2144,0:-180.002,-18.0618,0,-180.002,-18.0618,-180.002	1/1:60:0,59,1:0:0:59,1:2082,32:-174.993,-17.7608,0,-172.686,-15.1627,-172.385	1/1:76:0,76,0:0:0:76,0:2654,0:-225.669,-22.8783,0,-225.669,-22.8783,-225.669	1/1:56:0,56,0:0:0:56,0:1977,0:-173.29,-16.8577,0,-173.29,-16.8577,-173.29	1/1:60:0,60,0:0:0:60,0:2106,0:-182.115,-18.0618,0,-182.115,-18.0618,-182.115	1/1:26:0,26,0:0:0:26,0:920,0:-78.5787,-7.82678,0,-78.5787,-7.82678,-78.5787	1/1:29:0,29,0:0:0:29,0:1028,0:-85.5594,-8.72987,0,-85.5594,-8.72987,-85.5594	1/1:28:0,27,0:0:0:27,0:964,0:-81.8667,-8.12781,0,-81.8667,-8.12781,-81.8667	1/1:130:0,129,0:0:0:129,0:4537,0:-397.398,-38.8329,0,-397.398,-38.8329,-397.398	1/1:124:0,124,0:0:0:124,0:4348,0:-369.883,-37.3277,0,-369.883,-37.3277,-369.883	1/2:69:0,27,39:0:0:27,39:964,1348:-178.853,-102.067,-93.9396,-76.8025,0,-65.0623	1/1:74:0,73,0:0:0:73,0:2559,0:-223.592,-21.9752,0,-223.592,-21.9752,-223.592	1/2:36:0,25,10:0:0:25,10:855,337:-90.4213,-24.5904,-17.0646,-65.8154,0,-62.8051	1/1:52:0,52,0:0:0:52,0:1817,0:-157.36,-15.6536,0,-157.36,-15.6536,-157.36	1/2:217:0,124,89:0:0:124,89:4395,3098:-586.179,-235.333,-198.005,-350.894,0,-324.102	1/2:109:0,64,41:0:0:64,41:2292,1355:-275.385,-98.6042,-79.3383,-176.814,0,-164.472	1/1:32:0,32,0:0:0:32,0:1136,0:-97.9756,-9.63296,0,-97.9756,-9.63296,-97.9756	1/1:134:0,134,0:0:0:134,0:4741,0:-416.569,-40.338,0,-416.569,-40.338,-416.569	1/1:72:0,71,1:0:0:71,1:2487,32:-213.316,-21.3731,0,-211.009,-18.7751,-210.708	1/2:75:0,31,41:0:0:31,41:1078,1390:-188.326,-103.116,-93.7836,-85.2169,0,-72.8747	1/2:16:0,10,5:0:0:10,5:345,168:-39.188,-12.3218,-9.31153,-26.8552,0,-25.35	1/1:26:0,26,0:0:0:26,0:924,0:-78.0702,-7.82678,0,-78.0702,-7.82678,-78.0702	1/2:5:0,2,3:0:0:2,3:72,85:-11.0311,-6.43783,-5.83577,-4.87101,0,-3.96792	1/1:8:0,8,0:0:0:8,0:276,0:-23.5367,-2.40824,0,-23.5367,-2.40824,-23.5367	1/1:26:0,26,0:0:0:26,0:894,0:-75.7971,-7.82678,0,-75.7971,-7.82678,-75.7971	1/1:128:0,127,0:0:0:127,0:4493,0:-395.289,-38.2308,0,-395.289,-38.2308,-395.289	1/2:95:0,50,42:0:0:50,42:1746,1402:-236.291,-102.146,-87.095,-134.14,0,-121.497	1/2:36:0,16,19:0:0:16,19:576,571:-83.2082,-40.5488,-35.7324,-42.7076,0,-36.988	1/1:4:0,4,0:0:0:4,0:144,0:-12.7816,-1.20412,0,-12.7816,-1.20412,-12.7816	1/2:70:0,39,29:0:0:39,29:1362,984:-176.143,-71.9843,-60.2441,-104.176,0,-95.4461	1/2:48:0,23,21:0:0:23,21:824,674:-112.66,-48.7006,-41.7769,-63.9484,0,-57.6268	1/2:74:0,46,26:0:0:46,26:1629,861:-188.554,-62.9461,-49.0987,-125.613,0,-117.786	1/2:48:0,24,21:0:0:24,21:852,732:-120.966,-54.1026,-46.8779,-66.884,0,-60.5623	1/1:32:0,31,0:0:0:31,0:1104,0:-96.2259,-9.33193,0,-96.2259,-9.33193,-96.2259	1/2:89:0,48,41:0:0:48,41:1697,1402:-242.364,-106.682,-92.2326,-136.015,0,-123.673	1/2:59:0,25,34:0:0:25,34:900,1034:-142,-74.3023,-66.7766,-68.0068,0,-57.7718	1/2:83:0,40,41:0:0:40,41:1378,1402:-211.576,-103.465,-91.4235,-108.113,0,-95.7706	1/1:70:0,70,0:0:0:70,0:2414,0:-209.831,-21.0721,0,-209.831,-21.0721,-209.831	1/1:50:0,50,0:0:0:50,0:1743,0:-151.913,-15.0515,0,-151.913,-15.0515,-151.913	1/1:134:0,134,0:0:0:134,0:4730,0:-416.958,-40.338,0,-416.958,-40.338,-416.958	1/2:4:0,3,1:0:0:3,1:108,36:-11.0847,-2.99799,-2.0949,-8.41732,0,-8.11629	1/2:75:0,42,31:0:0:42,31:1458,989:-181.399,-71.3105,-58.6673,-110.129,0,-100.797	1/2:69:0,44,24:0:0:44,24:1534,854:-187.279,-65.0225,-51.7771,-122.289,0,-115.065	1/2:18:0,12,6:0:0:12,6:432,192:-46.0724,-14.1389,-10.5265,-32.2364,0,-30.4302	1/2:93:0,54,39:0:0:54,39:1894,1275:-239.888,-93.4708,-77.2151,-146.731,0,-134.991	1/2:13:0,10,3:0:0:10,3:341,100:-34.7443,-7.8778,-4.8675,-27.1843,0,-26.2812	1/1:8:0,8,0:0:0:8,0:284,0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chr08	6360784	.	G	A	18136.3	PASS	AB=0.446784;ABP=66.1049;AC=36;AF=0.191489;AN=188;AO=1159;CIGAR=1X;DP=6882;DPB=6882;DPRA=1.06352;EPP=2519.75;EPPR=12421.7;GTI=3;LEN=1;MEANALT=1;MQM=59.9612;MQMR=59.9699;NS=94;NUMALT=1;ODDS=0.821053;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41235;QR=203038;RO=5719;RPL=0;RPP=2519.75;RPPR=12421.7;RPR=1159;RUN=1;SAF=0;SAP=2519.75;SAR=1159;SRF=0;SRP=12421.7;SRR=5719;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:33:33,0:33:1175:0:0:0,-9.93399,-106.049	0/0:56:56,0:56:1968:0:0:0,-16.8577,-177.393	0/1:268:151,117:151:5368:117:4143:-292.379,0,-402.578	0/0:175:175,0:175:6189:0:0:0,-52.6802,-557.11	0/1:32:23,9:23:828:9:324:-19.8729,0,-65.2112	0/1:4:3,1:3:108:1:32:-1.99519,0,-8.87105	0/0:29:29,0:29:1032:0:0:0,-8.72987,-93.1935	0/0:92:92,0:92:3250:0:0:0,-27.6948,-292.085	0/0:52:52,0:52:1832:0:0:0,-15.6536,-165.158	0/0:61:61,0:61:2187:0:0:0,-18.3628,-197.095	0/0:48:48,0:48:1700:0:0:0,-14.4494,-153.283	0/0:70:70,0:70:2491:0:0:0,-21.0721,-224.443	0/0:62:62,0:62:2203:0:0:0,-18.6639,-198.535	0/0:47:47,0:47:1653:0:0:0,-14.1484,-149.056	0/0:74:74,0:74:2636:0:0:0,-22.2762,-237.488	0/0:47:47,0:47:1664:0:0:0,-14.1484,-150.047	0/0:33:33,0:33:1176:0:0:0,-9.93399,-106.148	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:23:23,0:23:800:0:0:0,-6.92369,-72.3158	0/0:144:143,0:143:5072:0:0:0,-43.0473,-456.265	0/0:131:130,0:130:4565:0:0:0,-39.1339,-410.659	0/1:74:23,51:23:819:51:1830:-142.701,0,-51.7553	0/0:88:86,2:86:3080:2:72:0,-19.6539,-270.591	0/1:60:42,18:42:1475:18:634:-39.3245,0,-114.979	0/0:54:54,0:54:1927:0:0:0,-16.2556,-173.706	0/1:166:96,70:96:3409:70:2505:-175.731,0,-257.054	0/1:199:106,93:106:3776:93:3313:-238.482,0,-280.133	0/0:28:28,0:28:987:0:0:0,-8.42884,-89.143	0/0:236:236,0:236:8414:0:0:0,-71.0431,-757.264	0/0:116:114,2:114:4060:2:72:0,-28.0828,-358.75	0/1:37:27,10:27:972:10:352:-20.8801,0,-76.6575	0/1:5:4,1:4:140:1:36:-2.09312,0,-11.4394	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:9:1,8:1:36:8:288:-23.5581,0,-0.889005	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:161:161,0:161:5717:0:0:0,-48.4658,-514.651	0/1:88:42,46:42:1499:46:1644:-121.758,0,-108.713	0/1:34:18,16:18:636:16:567:-41.1257,0,-47.333	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:87:52,35:52:1853:35:1242:-85.8935,0,-140.858	0/1:36:22,14:22:792:14:504:-34.861,0,-60.7686	0/1:96:44,52:44:1563:52:1846:-137.519,0,-112.062	0/1:33:22,11:22:788:11:396:-26.0488,0,-61.3108	0/0:37:37,0:37:1310:0:0:0,-11.1381,-118.198	0/1:83:58,25:58:2065:25:892:-55.6142,0,-161.134	0/1:42:19,23:19:684:23:815:-61.0275,0,-49.2471	0/1:96:55,41:55:1959:41:1435:-100.543,0,-147.686	0/0:121:121,0:121:4285:0:0:0,-36.4246,-385.742	0/0:116:116,0:116:4055:0:0:0,-34.9195,-365.136	0/0:133:133,0:133:4733:0:0:0,-40.037,-426.127	0/1:7:4,3:4:144:3:94:-6.66265,0,-11.2064	0/1:146:88,58:88:3147:58:2040:-139.902,0,-239.505	0/1:50:35,15:35:1244:15:536:-33.5233,0,-97.2132	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:120:67,53:67:2372:53:1901:-135.244,0,-177.613	0/1:31:14,17:14:504:17:608:-45.7201,0,-36.3662	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:10:8,2:8:279:2:72:-3.82642,0,-22.4372	0/0:63:62,1:62:2220:1:36:0,-15.3666,-196.444	0/0:70:70,0:70:2478:0:0:0,-21.0721,-223.273	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/1:164:94,70:94:3337:70:2477:-173.811,0,-251.172	0/0:106:106,0:106:3800:0:0:0,-31.9092,-342.197	0/0:48:48,0:48:1711:0:0:0,-14.4494,-154.275	0/0:88:88,0:88:3149:0:0:0,-26.4906,-283.633	0/0:110:104,6:104:3691:6:216:0,-13.3228,-312.602	0/1:122:45,77:45:1612:77:2742:-210.296,0,-108.644	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:71:71,0:71:2533:0:0:0,-21.3731,-228.22	0/0:43:43,0:43:1533:0:0:0,-12.9443,-138.26	0/0:25:25,0:25:876:0:0:0,-7.52575,-79.1543	0/0:152:152,0:152:5364:0:0:0,-45.7566,-482.896	0/1:62:40,22:40:1420:22:792:-52.9418,0,-109.434	0/0:95:95,0:95:3345:0:0:0,-28.5978,-301.258	0/0:177:176,0:176:6233:0:0:0,-52.9813,-560.71	0/0:41:41,0:41:1451:0:0:0,-12.3422,-130.885	0/0:58:58,0:58:2065:0:0:0,-17.4597,-186.119	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:104:103,1:103:3640:1:36:0,-27.7088,-324.205	0/1:126:80,46:80:2850:46:1652:-111.039,0,-218.808	0/0:178:178,0:178:6362:0:0:0,-53.5833,-572.67	0/0:43:43,0:43:1500:0:0:0,-12.9443,-135.29	0/0:64:64,0:64:2272:0:0:0,-19.2659,-204.74	0/1:39:22,17:22:784:17:608:-43.3119,0,-59.1437	0/0:110:110,0:110:3889:0:0:0,-33.1133,-350.207	0/0:25:25,0:25:879:0:0:0,-7.52575,-79.1075	0/1:51:32,19:32:1136:19:667:-45.0021,0,-87.1964	0/0:63:63,0:63:2210:0:0:0,-18.9649,-199.161	0/1:31:17,14:17:603:14:504:-36.3662,0,-45.2676	0/1:87:42,45:42:1504:45:1592:-117.377,0,-109.465	0/1:56:18,38:18:644:38:1364:-106.203,0,-41.4329	0/0:134:133,1:133:4704:1:32:0,-37.1387,-420.322	0/0:71:70,0:70:2470:0:0:0,-21.0721,-222.344
chr08	6379154	.	GTTCC	GTTTCC	104440	PASS	AB=0.478831;ABP=42.8194;AC=36;AF=0.191489;AN=188;AO=4927;CIGAR=1M1I4M;DP=27743;DPB=28732.6;DPRA=1.31184;EPP=10701.9;EPPR=49178.2;GTI=0;LEN=1;MEANALT=2.63043;MQM=51.0794;MQMR=59.9748;NS=94;NUMALT=1;ODDS=24.119;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=170195;QR=777945;RO=22658;RPL=2638;RPP=56.6915;RPPR=76.2178;RPR=2289;RUN=1;SAF=2638;SAP=56.6915;SAR=2289;SRF=11765;SRP=75.8831;SRR=10893;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	0/0:196:196,0:196:6585:0:0:0,-59.0019,-592.77	0/0:373:372,1:372:12803:1:28:0,-109.785,-1149.66	0/1:371:181,186:181:6213:186:6378:-456.522,0,-448.465	0/0:594:592,0:592:20225:0:0:0,-178.21,-1819.52	0/1:215:102,110:102:3470:110:3852:-278.853,0,-248.338	0/1:151:81,70:81:2795:70:2374:-162.737,0,-206.309	0/0:307:306,0:306:10610:0:0:0,-92.1152,-954.491	0/0:561:559,0:559:19194:0:0:0,-168.276,-1726.75	0/0:439:436,0:436:14970:0:0:0,-131.249,-1346.73	0/0:200:197,0:197:6800:0:0:0,-59.3029,-611.512	0/0:160:158,0:158:5447:0:0:0,-47.5627,-490.08	0/0:245:244,0:244:8295:0:0:0,-73.4513,-746.244	0/0:209:209,0:209:7092:0:0:0,-62.9153,-638.376	0/0:184:182,0:182:6292:0:0:0,-54.7875,-566.114	0/0:228:227,0:227:7829:0:0:0,-68.3338,-704.3	0/0:147:146,0:146:4994:0:0:0,-43.9504,-449.272	0/0:143:143,0:143:4878:0:0:0,-43.0473,-439.187	0/0:159:158,0:158:5409:0:0:0,-47.5627,-486.593	0/0:116:114,0:114:3928:0:0:0,-34.3174,-353.362	0/0:606:601,0:601:20643:0:0:0,-180.919,-1857.11	0/0:453:452,0:452:15363:0:0:0,-136.066,-1382.12	0/1:252:97,153:97:3325:153:5269:-396.377,0,-223.961	0/0:439:438,0:438:15063:0:0:0,-131.851,-1355.25	0/1:333:202,129:202:6980:129:4508:-299.083,0,-528.294	0/0:276:276,0:276:9486:0:0:0,-83.0843,-853.744	0/1:919:491,423:491:16903:423:14608:-1028.64,0,-1245.54	0/1:822:409,406:409:14008:406:14171:-1015.67,0,-1014.9	0/0:90:90,0:90:3072:0:0:0,-27.0927,-276.717	0/0:737:725,1:725:25050:1:36:0,-215.338,-2250.36	0/0:365:355,9:355:12199:9:320:0,-81.1731,-1069.06	0/1:388:209,176:209:7219:176:6098:-427.906,0,-533.639	0/1:21:13,8:13:448:8:265:-17.7094,0,-34.3269	0/0:52:52,0:52:1805:0:0:0,-15.6536,-162.731	0/1:30:16,14:16:549:14:447:-31.1839,0,-40.7031	0/0:28:28,0:28:964:0:0:0,-8.42884,-87.0697	0/0:43:43,0:43:1490:0:0:0,-12.9443,-134.392	0/0:546:546,0:546:18803:0:0:0,-164.362,-1691.94	0/1:462:239,220:239:8196:220:7663:-541.015,0,-599.186	0/1:148:69,77:69:2345:77:2620:-187.916,0,-167.067	0/0:19:19,0:19:664:0:0:0,-5.71957,-60.0839	0/1:309:156,152:156:5390:152:5265:-374.406,0,-392.31	0/1:88:47,41:47:1633:41:1404:-98.7611,0,-120.767	0/1:500:264,233:264:8995:233:7931:-556.68,0,-659.61	0/1:213:120,92:120:4146:92:3214:-222.276,0,-309.162	0/0:184:184,0:184:6226:0:0:0,-55.3895,-560.467	0/1:310:168,141:168:5744:141:4843:-339.999,0,-423.722	0/1:394:213,178:213:7280:178:6124:-422.684,0,-537.242	0/1:501:274,223:274:9306:223:7728:-539.962,0,-687.6	0/0:351:347,0:347:11855:0:0:0,-104.457,-1066.54	0/0:470:468,1:468:16307:1:36:0,-137.87,-1463.84	0/0:480:477,0:477:16486:0:0:0,-143.591,-1483.17	0/1:21:10,11:10:349:11:392:-29.0536,0,-25.4237	0/1:321:160,161:160:5495:161:5623:-401.15,0,-398.07	0/1:180:94,86:94:3182:86:3005:-214.595,0,-232.423	0/1:53:35,18:35:1166:18:597:-37.0208,0,-89.2818	0/1:542:303,232:303:10347:232:8076:-559.437,0,-769.805	0/1:152:84,68:84:2904:68:2326:-163.162,0,-215.845	0/0:41:39,0:39:1320:0:0:0,-11.7402,-118.737	0/1:53:25,28:25:860:28:967:-70.8936,0,-61.7589	0/0:271:269,0:269:9210:0:0:0,-80.9771,-828.627	0/0:246:243,2:243:8442:2:63:0,-68.1666,-753.871	0/0:29:29,0:29:985:0:0:0,-8.72987,-88.9557	0/1:513:270,241:270:9261:241:8315:-589.949,0,-679.403	0/0:785:779,4:779:26863:4:126:0,-224.452,-2405.4	0/0:218:218,0:218:7511:0:0:0,-65.6245,-676.05	0/0:278:277,0:277:9467:0:0:0,-83.3853,-851.675	0/0:610:602,5:602:20441:5:172:0,-167.854,-1824.1	0/1:417:140,271:140:4764:271:9299:-707.701,0,-304.913	0/0:91:89,0:89:3012:0:0:0,-26.7917,-271.034	0/0:225:224,0:224:7729:0:0:0,-67.4307,-695.318	0/0:193:192,0:192:6546:0:0:0,-57.7978,-588.91	0/0:79:78,0:78:2681:0:0:0,-23.4803,-241.179	0/0:279:279,0:279:9551:0:0:0,-83.9874,-859.601	0/1:209:100,109:100:3475:109:3791:-272.813,0,-250.054	0/0:518:516,0:516:17637:0:0:0,-155.331,-1586.52	0/0:484:482,0:482:16613:0:0:0,-145.096,-1494.5	0/0:470:463,2:463:15840:2:72:0,-133.708,-1418.78	0/0:323:320,3:320:11060:3:108:0,-87.2673,-985.381	0/1:43:21,22:21:732:22:738:-53.4776,0,-53.2563	0/0:367:367,0:367:12715:0:0:0,-110.478,-1144.23	0/1:342:190,150:190:6501:150:5131:-350.828,0,-482.534	0/0:846:837,2:837:28754:2:57:0,-247.448,-2581.73	0/0:229:227,0:227:7762:0:0:0,-68.3338,-698.294	0/0:201:199,0:199:6879:0:0:0,-59.905,-618.889	0/1:231:123,108:123:4267:108:3748:-264.511,0,-314.684	0/0:421:420,0:420:14433:0:0:0,-126.433,-1298.48	0/0:84:84,0:84:2898:0:0:0,-25.2865,-261.062	0/1:187:99,86:99:3377:86:2982:-207.538,0,-248.105	0/0:205:201,0:201:6917:0:0:0,-60.507,-622.281	0/1:101:44,57:44:1518:57:1994:-146.056,0,-106.507	0/1:242:140,101:140:4786:101:3476:-236.548,0,-358.026	0/1:193:75,116:75:2582:116:3955:-294.822,0,-174.796	0/0:305:304,0:304:10517:0:0:0,-91.5131,-946.236	0/0:318:316,0:316:10824:0:0:0,-95.1255,-973.762
chr08	6379163	.	T	G	119878	PASS	AB=0.506429;ABP=6.83539;AC=36;AF=0.191489;AN=188;AO=5430;CIGAR=1X;DP=28000;DPB=28000;DPRA=1.40313;EPP=11794.1;EPPR=48965.4;GTI=0;LEN=1;MEANALT=1.10417;MQM=51.3645;MQMR=59.9664;NS=94;NUMALT=1;ODDS=16.9039;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=191038;QR=801531;RO=22560;RPL=2793;RPP=12.7423;RPPR=45.704;RPR=2637;RUN=1;SAF=2793;SAP=12.7423;SAR=2637;SRF=11612;SRP=45.448;SRR=10948;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:199:199,0:199:7078:0:0:0,-59.905,-637.079	0/0:369:368,1:368:13042:1:36:0,-108.344,-1170.86	0/1:393:184,209:184:6491:209:7399:-539.684,0,-465.974	0/0:588:588,0:588:20876:0:0:0,-177.006,-1878.33	0/1:225:105,119:105:3727:119:4208:-306.996,0,-267.835	0/1:149:80,69:80:2840:69:2411:-165.258,0,-210.976	0/0:307:307,0:307:10916:0:0:0,-92.4162,-982.34	0/0:553:552,0:552:19585:0:0:0,-166.169,-1761.83	0/0:435:435,0:435:15435:0:0:0,-130.948,-1388.67	0/0:198:198,0:198:6999:0:0:0,-59.6039,-629.041	0/0:160:160,0:160:5692:0:0:0,-48.1648,-512.395	0/0:245:245,0:245:8680:0:0:0,-73.7523,-781.201	0/0:204:204,0:204:7192:0:0:0,-61.4101,-647.335	0/0:179:179,0:179:6322:0:0:0,-53.8844,-569.078	0/0:228:228,0:228:8099:0:0:0,-68.6348,-728.919	0/0:147:146,0:146:5180:0:0:0,-43.9504,-465.983	0/0:142:141,0:141:4968:0:0:0,-42.4452,-446.895	0/0:159:159,0:159:5638:0:0:0,-47.8638,-507.526	0/0:118:118,0:118:4158:0:0:0,-35.5215,-374.406	0/0:595:594,1:594:21141:1:36:0,-175.515,-1898.57	0/0:451:451,0:451:15968:0:0:0,-135.765,-1436.81	0/1:263:95,168:95:3386:168:5916:-450.415,0,-225.784	0/0:428:428,0:428:15237:0:0:0,-128.841,-1371.06	0/1:343:205,138:205:7251:138:4839:-324.634,0,-549.393	0/0:278:278,0:278:9907:0:0:0,-83.6863,-891.57	0/1:953:483,470:483:17182:470:16572:-1191.37,0,-1259.13	0/1:843:409,434:409:14554:434:15212:-1099.79,0,-1055.83	0/0:88:88,0:88:3122:0:0:0,-26.4906,-281.207	0/0:731:730,1:730:25970:1:36:0,-216.486,-2333.02	0/0:357:348,9:348:12317:9:324:0,-78.3842,-1079.3	0/1:405:211,194:211:7533:194:6771:-481.527,0,-556.009	0/1:22:13,9:13:464:9:305:-21.0546,0,-35.4748	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/1:33:16,17:16:572:17:604:-44.4516,0,-41.8794	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:42:42,0:42:1500:0:0:0,-12.6433,-135.295	0/0:544:544,0:544:19265:0:0:0,-163.76,-1733.42	0/1:485:238,247:238:8445:247:8691:-622.142,0,-614.055	0/1:156:69,87:69:2440:87:3010:-219.018,0,-172.887	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/1:317:153,164:153:5476:164:5792:-417.256,0,-397.539	0/1:91:45,45:45:1608:45:1586:-113.641,0,-117.558	0/1:525:264,261:264:9412:261:9152:-656.353,0,-689.001	0/1:219:117,102:117:4166:102:3622:-256.116,0,-309.198	0/0:184:184,0:184:6560:0:0:0,-55.3895,-590.483	0/1:322:165,157:165:5877:157:5530:-396.665,0,-432.11	0/1:413:215,198:215:7646:198:6969:-490.048,0,-563.854	0/1:530:271,259:271:9657:259:9093:-652.082,0,-709.484	0/0:350:350,0:350:12421:0:0:0,-105.36,-1117.7	0/0:466:465,1:465:16518:1:29:0,-137.38,-1483.4	0/0:475:475,0:475:16867:0:0:0,-142.989,-1517.02	0/1:21:10,11:10:352:11:396:-29.3897,0,-25.6966	0/1:329:158,171:158:5606:171:6045:-436.06,0,-405.628	0/1:188:94,94:94:3345:94:3302:-238.706,0,-244.673	0/1:55:35,20:35:1252:20:699:-45.5803,0,-96.4284	0/1:562:309,253:309:10971:253:8897:-622.966,0,-818.089	0/1:156:84,72:84:2995:72:2500:-177.629,0,-222.821	0/0:39:39,0:39:1382:0:0:0,-11.7402,-124.677	0/1:54:24,30:24:843:30:1020:-75.2499,0,-59.9324	0/0:276:276,0:276:9823:0:0:0,-83.0843,-883.993	0/0:245:242,2:242:8607:2:72:0,-67.0673,-767.887	0/0:28:28,0:28:985:0:0:0,-8.42884,-88.9615	0/1:537:272,265:272:9652:265:9390:-677.975,0,-706.922	0/0:774:770,4:770:27388:4:131:0,-220.949,-2452.01	0/0:218:218,0:218:7756:0:0:0,-65.6245,-698.057	0/0:275:275,0:275:9713:0:0:0,-82.7832,-874.127	0/0:605:598,7:598:21321:7:248:0,-160.499,-1896.73	0/1:457:144,313:144:5131:313:11042:-849.582,0,-324.361	0/0:92:92,0:92:3246:0:0:0,-27.6948,-292.291	0/0:218:218,0:218:7720:0:0:0,-65.6245,-694.839	0/0:189:189,0:189:6713:0:0:0,-56.8947,-604.192	0/0:80:80,0:80:2845:0:0:0,-24.0824,-256.287	0/0:279:279,0:279:9922:0:0:0,-83.9874,-892.924	0/1:213:96,117:96:3384:117:4107:-299.584,0,-240.655	0/0:508:508,0:508:18049:0:0:0,-152.923,-1623.53	0/0:486:485,0:485:17219:0:0:0,-146,-1548.37	0/0:453:452,1:452:16177:1:36:0,-132.886,-1452.13	0/0:321:318,3:318:11326:3:108:0,-86.6652,-1009.26	0/1:45:21,24:21:748:24:852:-63.2381,0,-54.0989	0/0:361:361,0:361:12875:0:0:0,-108.672,-1158.57	0/1:363:192,171:192:6847:171:6057:-426.006,0,-507.017	0/0:834:830,3:830:29548:3:104:0,-241.382,-2648.75	0/0:232:231,1:231:8155:1:36:0,-66.2407,-730.366	0/0:196:196,0:196:6943:0:0:0,-59.0019,-624.942	0/1:239:126,112:126:4473:112:3921:-276.873,0,-330.74	0/0:417:417,0:417:14759:0:0:0,-125.53,-1328.06	0/0:82:82,0:82:2915:0:0:0,-24.6845,-262.586	0/1:192:101,91:101:3586:91:3191:-222.354,0,-265.151	0/0:206:206,0:206:7343:0:0:0,-62.0122,-660.92	0/1:104:42,62:42:1495:62:2193:-161.553,0,-103.537	0/1:252:140,112:140:4948:112:3911:-272.038,0,-369.587	0/1:201:70,131:70:2476:131:4637:-352.83,0,-162.588	0/0:300:299,0:299:10687:0:0:0,-90.008,-961.529	0/0:310:310,0:310:11006: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chr08	6405286	.	CTTGC	TTTGC,CTTAC	15097	PASS	AB=0.358722,0.0635031;ABP=496.927,4746.01;AC=31,9;AF=0.164894,0.0478723;AN=188;AO=1047,330;CIGAR=1X4M,3M1X1M;DP=8598;DPB=8693.6;DPRA=0.995132,1.39577;EPP=2276.54,719.596;EPPR=15103.4;GTI=11;LEN=1,1;MEANALT=3.13514,2.58333;MQM=60,59.6848;MQMR=59.8005;NS=94;NUMALT=2;ODDS=0.0734056;PAIRED=0,0;PAIREDR=0;PAO=99,99;PQA=3538,3538;PQR=3538;PRO=99;QA=37215,11826;QR=242031;RO=6962;RPL=1047,330;RPP=2276.54,719.596;RPPR=15103.4;RPR=0,0;RUN=1,1;SAF=1047,330;SAP=2276.54,719.596;SAR=0,0;SRF=6962;SRP=15120.8;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:39:37,0,0:37:1281:0,0:0,0:0,-11.1381,-114.984,-11.1381,-114.984,-114.984	0/0:54:54,0,0:54:1862:0,0:0,0:0,-16.2556,-167.806,-16.2556,-167.806,-167.806	0/1:144:86,51,2:86:2980:51,2:1795,72:-120.212,0,-226.804,-140.226,-236.281,-381.805	0/0:250:240,0,8:240:8395:0,8:0,288:0,-72.2472,-755.177,-48.8678,-731.678,-729.27	0/2:39:32,3,4:32:1125:3,4:108,144:-2.11671,-2.93742,-93.597,0,-82.7495,-90.3584	0/1:18:14,2,1:14:483:2,1:72,36:-1.66042,0,-38.6233,-2.93742,-36.2871,-41.8625	0/0:94:89,0,4:89:3107:0,4:0,144:0,-26.7917,-279.521,-14.9621,-267.771,-266.567	0/0:101:89,0,7:89:3094:0,7:0,252:0,-26.7917,-278.282,-6.30902,-257.72,-255.613	0/0:54:50,0,2:50:1754:0,2:0,72:0,-15.0515,-157.81,-9.14919,-151.934,-151.332	0/0:84:76,0,6:76:2618:0,6:0,216:0,-22.8783,-235.479,-5.32866,-217.854,-216.047	0/2:63:52,0,7:52:1794:0,7:0,252:-4.88609,-20.5397,-166.257,0,-145.693,-143.586	0/0:77:77,0,0:77:2667:0,0:0,0:0,-23.1793,-240.276,-23.1793,-240.276,-240.276	0/0:80:78,0,0:78:2739:0,0:0,0:0,-23.4803,-246.098,-23.4803,-246.098,-246.098	0/0:65:63,0,2:63:2126:0,2:0,72:0,-18.9649,-191.238,-12.7302,-185.362,-184.76	0/0:56:52,0,4:52:1818:0,4:0,144:0,-15.6536,-163.539,-3.54406,-151.789,-150.585	0/0:59:55,0,2:55:1880:0,2:0,72:0,-16.5566,-169.125,-10.6718,-163.25,-162.648	0/0:33:33,0,0:33:1153:0,0:0,0:0,-9.93399,-103.98,-9.93399,-103.98,-103.98	0/0:35:33,0,2:33:1163:0,2:0,72:0,-9.93399,-104.617,-3.69933,-98.742,-98.14	0/2:22:18,0,3:18:634:0,3:0,108:-3.24383,-8.66237,-60.2321,0,-51.4203,-50.5172	0/0:125:123,0,0:123:4301:0,0:0,0:0,-37.0267,-386.839,-37.0267,-386.839,-386.839	0/0:195:185,0,9:185:6441:0,9:0,324:0,-55.6905,-579.41,-29.4982,-552.975,-550.265	0/1:77:43,22,0:43:1540:22,0:764,0:-49.1695,0,-118.845,-62.1138,-125.468,-187.573	0/0:84:82,0,1:82:2862:0,1:0,36:0,-24.6845,-257.437,-21.772,-254.499,-254.198	0/1:37:25,9,1:25:863:9,1:324,36:-18.911,0,-67.3802,-23.4993,-67.1515,-93.2907	0/0:18:17,0,0:17:591:0,0:0,0:0,-5.11751,-52.9685,-5.11751,-52.9685,-52.9685	0/1:161:79,75,6:79:2719:75,6:2678,216:-194.555,0,-198.063,-200.712,-203.015,-419.547	0/1:168:94,64,9:94:3226:64,9:2279,311:-157.449,0,-242.645,-160.478,-236.641,-419.686	0/0:33:32,0,0:32:1101:0,0:0,0:0,-9.63296,-99.0351,-9.63296,-99.0351,-99.0351	0/0:252:244,0,0:244:8546:0,0:0,0:0,-73.4513,-768.805,-73.4513,-768.805,-768.805	0/0:100:96,2,2:96:3385:2,2:72,72:0,-23.024,-298.033,-23.024,-292.76,-298.033	0/1:93:58,32,2:58:1990:32,2:1139,72:-75.3662,0,-151.919,-86.9509,-155.677,-247.909	0/0:72:64,3,3:64:2227:3,3:108,108:0,-10.4649,-190.476,-10.4649,-182.566,-190.476	0/0:157:144,0,5:144:5016:0,5:0,180:0,-43.3483,-451.243,-28.6593,-436.557,-435.051	0/2:154:128,0,25:128:4443:0,25:0,900:-33.7023,-72.2341,-433.333,0,-359.898,-352.372	0/2:168:118,0,33:118:4122:0,33:0,1179:-60.5544,-96.0759,-431.328,0,-335.215,-325.281	0/0:117:106,0,1:106:3698:0,1:0,36:0,-31.9092,-332.036,-28.9819,-329.099,-328.797	0/0:129:124,0,2:124:4262:0,2:0,72:0,-37.3277,-383.407,-31.4529,-377.532,-376.93	0/1:74:40,32,0:40:1375:32,0:1143,0:-81.0743,0,-101.938,-93.1155,-111.571,-204.764	0/1:54:30,18,2:30:1010:18,2:627,72:-41.8918,0,-76.2914,-45.0488,-75.8347,-126.219	0/2:67:45,0,9:45:1579:0,9:0,316:-12.1302,-25.6765,-154.139,0,-128.446,-125.737	0/1:125:71,54,0:71:2497:54,0:1919,0:-135.113,0,-187.109,-156.486,-203.364,-359.74	0/1:29:18,9,1:18:617:9,1:309,36:-19.6357,0,-47.3416,-22.1159,-47.1127,-71.899	0/1:72:48,13,5:48:1648:13,5:459,180:-22.897,0,-129.844,-22.6645,-119.07,-154.942	0/1:60:37,20,0:37:1281:20,0:712,0:-46.8278,0,-98.0066,-57.9659,-104.027,-162.059	0/0:70:66,0,1:66:2293:0,1:0,36:0,-19.868,-206.26,-16.9347,-203.322,-203.021	0/1:53:37,14,2:37:1288:14,2:492,72:-28.9011,0,-100.437,-34.1633,-98.7764,-138.222	0/1:74:41,19,10:41:1415:19,10:676,360:-42.7567,0,-109.235,-25.7927,-85.6483,-137.735	0/1:105:49,48,7:49:1703:48,7:1705,252:-124.159,0,-123.98,-118.349,-117.868,-254.693	0/0:44:42,0,2:42:1459:0,2:0,72:0,-12.6433,-131.243,-6.41106,-125.37,-124.768	0/0:164:150,0,8:150:5265:0,8:0,288:0,-45.1545,-473.345,-21.6751,-449.845,-447.437	0/0:54:49,0,4:49:1700:0,4:0,140:0,-14.7505,-152.93,-3.36784,-141.539,-140.335	0/0:123:92,4,6:92:3210:4,6:144,216:0,-15.9509,-275.663,-10.0796,-259.242,-269.186	0/1:75:51,22,2:51:1782:22,2:784,72:-48.4805,0,-138.254,-57.9585,-139.001,-202.306	0/1:60:42,17,1:42:1464:17,1:603,36:-36.4792,0,-113.929,-46.1848,-116.109,-164.937	0/1:84:64,9,8:64:2241:9,8:320,280:-6.78034,0,-179.546,-3.29436,-159.476,-183.144	0/1:192:121,56,4:121:4200:56,4:1992,1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chr08	6405307	.	CTG	TTG	15019.9	PASS	AB=0.339382;ABP=706.842;AC=32;AF=0.170213;AN=188;AO=1081;CIGAR=1X2M;DP=8990;DPB=8990.67;DPRA=1.01849;EPP=2350.37;EPPR=12822.6;GTI=11;LEN=1;MEANALT=2.23684;MQM=59.9889;MQMR=59.5661;NS=94;NUMALT=1;ODDS=0.0213503;PAIRED=0;PAIREDR=0;PAO=1;PQA=18;PQR=0;PRO=0;QA=38522;QR=260898;RO=7511;RPL=1081;RPP=2350.37;RPPR=12822.6;RPR=0;RUN=1;SAF=1081;SAP=2350.37;SAR=0;SRF=7511;SRP=16312.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:46:44,0:44:1527:0:0:0,-13.2453,-137.283	0/0:56:56,0:56:1932:0:0:0,-16.8577,-174.152	0/1:154:95,56:95:3296:56:2004:-134.844,0,-250.957	0/0:253:243,0:243:8518:0:0:0,-73.1503,-766.115	0/0:40:32,3:32:1105:3:104:0,-1.17802,-90.0539	0/1:17:15,2:15:527:2:72:-1.71921,0,-42.643	0/0:93:90,0:90:3072:0:0:0,-27.0927,-276.38	0/0:114:107,0:107:3722:0:0:0,-32.2102,-334.374	0/0:54:52,0:52:1800:0:0:0,-15.6536,-161.938	0/0:88:82,0:82:2865:0:0:0,-24.6845,-257.66	0/0:67:60,0:60:2071:0:0:0,-18.0618,-186.286	0/0:76:76,0:76:2630:0:0:0,-22.8783,-236.946	0/0:83:77,0:77:2710:0:0:0,-23.1793,-243.771	0/0:62:60,0:60:2041:0:0:0,-18.0618,-183.599	0/0:54:51,0:51:1793:0:0:0,-15.3525,-161.304	0/0:60:58,0:58:2007:0:0:0,-17.4597,-180.542	0/0:36:36,0:36:1243:0:0:0,-10.8371,-112.167	0/0:34:32,0:32:1143:0:0:0,-9.63296,-102.862	0/0:27:24,0:24:825:0:0:0,-7.22472,-74.1857	0/0:122:121,0:121:4219:0:0:0,-36.4246,-379.452	0/0:198:188,0:188:6491:0:0:0,-56.5936,-583.912	0/1:81:58,21:58:2031:21:738:-42.6085,0,-158.854	0/0:85:84,0:84:2931:0:0:0,-25.2865,-263.706	0/1:38:27,10:27:932:10:360:-21.328,0,-72.7707	0/0:21:21,0:21:745:0:0:0,-6.32163,-67.3521	0/1:175:87,78:87:2948:78:2784:-200.785,0,-215.376	0/1:173:100,64:100:3432:64:2287:-156.37,0,-259.382	0/0:36:36,0:36:1255:0:0:0,-10.8371,-113.249	0/0:261:260,0:260:9080:0:0:0,-78.2678,-816.735	0/0:99:95,2:95:3284:2:72:0,-22.713,-288.958	0/1:95:58,35:58:2002:35:1256:-85.0511,0,-152.159	0/0:75:66,3:66:2290:3:108:0,-11.0547,-196.239	0/0:156:151,0:151:5252:0:0:0,-45.4555,-472.505	0/0:178:154,0:154:5393:0:0:0,-46.3586,-485.029	0/0:189:158,0:158:5445:0:0:0,-47.5627,-488.396	0/0:141:128,0:128:4475:0:0:0,-38.5318,-402.295	0/0:130:128,0:128:4431:0:0:0,-38.5318,-398.611	0/1:79:46,33:46:1634:33:1161:-81.0134,0,-123.52	0/1:64:41,20:41:1406:20:716:-46.0583,0,-108.031	0/0:78:71,0:71:2482:0:0:0,-21.3731,-223.176	0/1:132:76,56:76:2653:56:1993:-139.848,0,-199.154	0/1:30:20,9:20:703:9:320:-20.089,0,-54.5193	0/1:83:65,13:65:2246:13:464:-18.2769,0,-178.478	0/1:66:46,20:46:1602:20:711:-44.4477,0,-124.542	0/0:72:71,0:71:2434:0:0:0,-21.3731,-218.926	0/1:52:36,13:36:1210:13:460:-26.6283,0,-94.0896	0/1:74:45,20:45:1524:20:705:-43.8619,0,-117.536	0/1:104:52,45:52:1836:45:1612:-115.816,0,-135.937	0/0:45:43,0:43:1504:0:0:0,-12.9443,-135.292	0/0:172:159,0:159:5457:0:0:0,-47.8638,-490.834	0/0:54:50,0:50:1728:0:0:0,-15.0515,-155.485	0/0:149:139,4:139:4891:4:144:0,-30.0882,-426.628	0/1:76:53,21:53:1874:21:743:-44.5578,0,-146.284	0/1:62:42,19:42:1460:19:684:-43.1677,0,-112.966	0/1:99:80,9:80:2802:9:324:-2.35866,0,-225.082	0/1:214:148,60:148:5103:60:2115:-127.655,0,-396.176	0/1:23:16,5:16:552:5:180:-9.87337,0,-43.3291	0/0:84:76,0:76:2613:0:0:0,-22.8783,-235.001	0/1:22:11,9:11:383:9:320:-22.7627,0,-28.4248	0/0:39:39,0:39:1335:0:0:0,-11.7402,-120.444	0/0:58:58,0:58:2053:0:0:0,-17.4597,-185.042	0/0:82:76,0:76:2696:0:0:0,-22.8783,-242.334	0/1:327:172,146:172:5969:146:5201:-372.156,0,-441.259	0/0:88:88,0:88:3068:0:0:0,-26.4906,-276.344	0/0:53:53,0:53:1838:0:0:0,-15.9546,-165.583	0/0:114:108,0:108:3645:0:0:0,-32.5112,-327.929	0/0:120:118,2:118:4072:2:72:0,-29.2869,-359.591	0/1:169:102,63:102:3538:63:2243:-152.154,0,-268.484	0/0:33:28,0:28:965:0:0:0,-8.42884,-86.8144	0/0:38:38,0:38:1345:0:0:0,-11.4391,-121.351	0/0:50:47,1:47:1626:1:36:0,-11.1985,-143.052	0/0:86:79,0:79:2724:0:0:0,-23.7814,-244.779	0/0:84:78,0:78:2716:0:0:0,-23.4803,-244.341	0/1:60:27,32:27:943:32:1140:-84.7887,0,-67.028	0/0:115:113,0:113:3893:0:0:0,-34.0164,-350.228	0/0:251:246,0:246:8612:0:0:0,-74.0534,-774.748	0/0:37:31,0:31:1098:0:0:0,-9.33193,-98.6376	0/0:151:147,0:147:5137:0:0:0,-44.2514,-462.139	0/1:169:127,14:127:4431:14:500:-2.53214,0,-355.888	0/0:107:106,0:106:3670:0:0:0,-31.9092,-330.148	0/1:142:90,49:90:3173:49:1743:-114.979,0,-243.446	0/0:160:157,0:157:5479:0:0:0,-47.2617,-492.652	0/0:35:35,0:35:1232:0:0:0,-10.536,-111.098	0/0:59:56,0:56:1938:0:0:0,-16.8577,-174.334	0/1:38:25,13:25:856:13:468:-31.0205,0,-65.8829	0/0:100:98,0:98:3342:0:0:0,-29.5009,-300.645	0/0:13:12,0:12:404:0:0:0,-3.61236,-36.3248	0/1:73:43,27:43:1468:27:972:-66.366,0,-110.972	0/0:51:47,0:47:1653:0:0:0,-14.1484,-148.718	0/1:53:37,12:37:1294:12:432:-24.1207,0,-101.64	0/1:130:80,46:80:2752:46:1630:-108.701,0,-209.559	0/1:67:21,46:21:743:46:1648:-128.44,0,-46.983	0/0:262:259,0:259:9025:0:0:0,-77.9668,-811.926	0/0:75:74,0:74:2605:0:0:0,-22.2762,-234.34
chr08	6405339	.	GACGAACATC	GACGAACTTC,GACGGACTTC,AACGAACTTC,GACGTACTTC	115641	PASS	AB=0.561202,0.284782,0.103138,0.113194;ABP=132.984,989.099,5321.89,3539.15;AC=129,26,20,10;AF=0.68617,0.138298,0.106383,0.0531915;AN=188;AO=4302,701,480,345;CIGAR=7M1X2M,4M1X2M1X2M,1X6M1X2M,4M1X2M1X2M;DP=6257;DPB=6261.6;DPRA=0,1.02699,1.35099,1.1986;EPP=9344.68,1525.21,1045.32,752.168;EPPR=359.132;GTI=10;LEN=1,10,10,10;MEANALT=4.14894,5.10256,4.26744,4.92453;MQM=58.3752,59.9743,42.1521,49.458;MQMR=59.9756;NS=94;NUMALT=4;ODDS=3040.24;PAIRED=0,0,0,0;PAIREDR=0;PAO=1,1,1,1;PQA=0,0,0,0;PQR=0;PRO=1;QA=153388,24748,16916,12104;QR=5743;RO=164;RPL=211,0,0,206;RPP=7601.85,1525.21,1045.32,31.2646;RPPR=359.132;RPR=4091,701,480,139;RUN=1,1,1,1;SAF=211,0,0,206;SAP=7601.85,1525.21,1045.32,31.2646;SAR=4091,701,480,139;SRF=0;SRP=359.132;SRR=164;TYPE=snp,complex,complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/3:57:6,33,0,8,7:6:212:33,0,8,7:1167,0,288,251:-97.6539,-4.71078,-12.0436,-99.4601,-21.9776,-116.726,-77.4798,0,-94.7456,-92.3374,-79.0875,-1.60329,-96.3537,-74.3733,-94.2465	1/3:37:3,29,0,4,1:3:108:29,0,4,1:1040,0,144,35:-86.0839,-2.16572,-2.25407,-86.9869,-10.9839,-95.7995,-75.9979,0,-84.8103,-83.6062,-84.1534,-8.15018,-92.966,-81.9769,-92.665	1/2:63:0,29,20,7,7:0:0:29,20,7,7:1036,710,237,237:-142.051,-57.8663,-49.1365,-84.1982,0,-78.1776,-123.987,-39.8043,-66.1352,-121.88,-122.954,-38.7688,-65.1008,-104.89,-120.846	1/4:171:1,129,0,8,15:1:35:129,0,8,15:4624,0,279,538:-417.599,-40.8535,-4.86836,-417.9,-43.7012,-420.748,-395.73,-21.5321,-398.578,-396.17,-374.203,0,-377.051,-354.881,-372.535	1/3:19:0,14,1,4,0:0:0:14,1,4,0:504,36,144,0:-52.2625,-11.2613,-7.04685,-49.3249,-8.32119,-49.0239,-40.9932,0,-38.0557,-39.7891,-52.2625,-11.2613,-49.3249,-40.9932,-52.2625	1/3:14:0,5,4,4,0:0:0:5,4,4,0:180,139,144,0:-26.3991,-11.7247,-10.2195,-15.1004,-0.425428,-13.8963,-14.6796,0,-3.38088,-13.4755,-26.3991,-11.7247,-15.1004,-14.6796,-26.3991	1/1:44:0,41,0,2,1:0:0:41,0,2,1:1476,0,72,30:-132.801,-12.3422,0,-132.801,-12.3422,-132.801,-127.09,-6.59682,-127.09,-126.487,-130.405,-9.96179,-130.405,-124.694,-130.104	1/4:69:6,41,0,9,10:6:204:41,0,9,10:1459,0,320,352:-128.601,-11.7017,-15.9062,-130.407,-28.2484,-146.953,-105.935,-3.77653,-122.481,-119.772,-102.162,0,-118.708,-94.2367,-115.698	1/3:65:0,55,0,7,0:0:0:55,0,7,0:1928,0,252,0:-174.73,-19.2374,-2.68077,-174.73,-19.2374,-174.73,-155.497,0,-155.497,-153.389,-174.73,-19.2374,-174.73,-155.497,-174.73	1/1:66:0,56,0,6,2:0:0:56,0,6,2:1986,0,212,65:-178.591,-16.8577,0,-178.591,-16.8577,-178.591,-161.759,-0.00166013,-161.759,-159.953,-173.376,-11.643,-173.376,-156.543,-172.774	1/3:36:0,29,0,6,0:0:0:29,0,6,0:1036,0,192,0:-99.0718,-15.139,-6.40916,-99.0718,-15.139,-99.0718,-83.9637,0,-83.9637,-82.1576,-99.0718,-15.139,-99.0718,-83.9637,-99.0718	1/1:84:4,78,0,1,0:4:142:78,0,1,0:2786,0,36,0:-237.548,-11.9063,0,-238.752,-23.4803,-250.322,-236.004,-20.7354,-247.574,-247.273,-238.752,-23.4803,-250.322,-247.574,-250.322	1/1:77:4,67,0,2,2:4:140:67,0,2,2:2400,0,72,72:-203.011,-8.77875,0,-204.215,-20.169,-215.606,-198.72,-14.6761,-210.111,-209.509,-198.366,-14.3182,-209.757,-204.262,-209.155	1/1:34:0,29,0,1,2:0:0:29,0,1,2:1040,0,36,72:-93.5411,-8.72987,0,-93.5411,-8.72987,-93.5411,-90.6098,-5.79445,-90.6098,-90.3088,-87.7229,-2.90219,-87.7229,-84.7915,-87.1208	1/1:65:0,58,0,4,0:0:0:58,0,4,0:2088,0,144,0:-187.802,-17.4597,0,-187.802,-17.4597,-187.802,-176.46,-6.11687,-176.46,-175.255,-187.802,-17.4597,-187.802,-176.46,-187.802	1/1:36:0,36,0,0,0:0:0:36,0,0,0:1268,0,0,0:-114.419,-10.8371,0,-114.419,-10.8371,-114.419,-114.419,-10.8371,-114.419,-114.419,-114.419,-10.8371,-114.419,-114.419,-114.419	1/1:30:0,30,0,0,0:0:0:30,0,0,0:1072,0,0,0:-96.5024,-9.0309,0,-96.5024,-9.0309,-96.5024,-96.5024,-9.0309,-96.5024,-96.5024,-96.5024,-9.0309,-96.5024,-96.5024,-96.5024	1/1:34:0,33,0,0,0:0:0:33,0,0,0:1180,0,0,0:-106.097,-9.93399,0,-106.097,-9.93399,-106.097,-106.097,-9.93399,-106.097,-106.097,-106.097,-9.93399,-106.097,-106.097,-106.097	1/1:26:0,21,0,1,2:0:0:21,0,1,2:744,0,36,71:-66.9328,-6.32163,0,-66.9328,-6.32163,-66.9328,-64.0031,-3.38869,-64.0031,-63.7021,-61.1714,-0.553879,-61.1714,-58.2417,-60.5693	1/1:75:0,64,0,4,5:0:0:64,0,4,5:2291,0,144,176:-205.828,-19.2659,0,-205.828,-19.2659,-205.828,-194.678,-8.11832,-194.678,-193.474,-191.578,-5.01443,-191.578,-180.427,-190.073	1/1:145:0,139,0,6,0:0:0:139,0,6,0:4959,0,206,0:-445.33,-41.8432,0,-445.33,-41.8432,-445.33,-429.731,-25.921,-429.731,-427.925,-445.33,-41.8432,-445.33,-429.731,-445.33	1/2:65:7,15,23,2,9:7:241:15,23,2,9:536,821,72,320:-88.933,-47.3619,-62.4193,-24.1071,0,-36.756,-85.3788,-61.2733,-38.0183,-104.35,-65.0271,-40.9213,-17.6661,-78.9386,-81.8908	1/1:40:0,35,0,1,0:0:0:35,0,1,0:1248,0,36,0:-111.981,-10.5361,0,-111.981,-10.5361,-111.981,-109.05,-7.60478,-109.05,-108.749,-111.981,-10.5361,-111.981,-109.05,-111.981	1/2:37:0,25,11,1,0:0:0:25,11,1,0:900,381,36,0:-104.396,-30.9523,-23.4265,-73.4361,0,-70.1248,-101.465,-28.0199,-70.5049,-101.164,-104.396,-30.9523,-73.4361,-101.465,-104.396	1/3:21:0,17,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chr08	6405371	.	TGAAGTA	GGAAGTA,GAAAGTA,AGAAATA	95950.6	PASS	AB=0.583874,0.105528,0.0540654;ABP=200.803,3768.56,4124.24;AC=134,21,5;AF=0.712766,0.111702,0.0265957;AN=188;AO=4355,374,187;CIGAR=1X6M,2X5M,1X3M1X2M;DP=5913;DPB=5956.57;DPRA=0,1.42529,1.34921;EPP=9347.19,806.478,409.076;EPPR=1519.13;GTI=21;LEN=1,2,7;MEANALT=3.78723,3.97368,3.98551;MQM=58.6808,38.3021,51.4973;MQMR=59.9557;NS=94;NUMALT=3;ODDS=0.393494;PAIRED=0,0,0;PAIREDR=0;PAO=0.25,0.25,0;PQA=8,8,0;PQR=0;PRO=0;QA=155265,13186,6602;QR=25515;RO=722;RPL=4342,373,187;RPP=9347.19,806.478,409.076;RPPR=1519.13;RPR=13,1,0;RUN=1,1,1;SAF=0,0,0;SAP=9459.77,815.141,409.076;SAR=4355,374,187;SRF=0;SRP=1570.81;SRR=722;TYPE=snp,mnp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:53:0,39,10,1:0:0:39,10,1:1378,358,36:-139.48,-27.3666,-15.6265,-112.12,0,-109.11,-136.556,-24.4412,-109.196,-136.255	1/2:39:0,33,6,0:0:0:33,6,0:1184,216,0:-113.484,-16.911,-6.97697,-96.9158,0,-95.1096,-113.484,-16.911,-96.9158,-113.484	0/1:60:22,27,7,0:22:768:27,7,0:959,252,0:-71.5221,0,-54.3521,-58.9123,-43.2465,-119.273,-78.1448,-62.4799,-121.381,-140.614	1/1:166:1,143,5,5:1:36:143,5,5:5108,170,171:-455.752,-40.1094,0,-443.164,-30.1661,-444.597,-442.185,-29.1816,-432.235,-443.618	1/3:19:1,12,3,3:1:36:12,3,3:432,108,108:-40.6963,-5.79268,-5.11921,-32.6595,-0.39741,-34.6939,-32.2699,0,-26.8702,-34.3045	0/1:14:4,8,0,1:4:144:8,0,1:288,0,33:-22.2822,0,-9.36486,-23.4863,-11.7731,-35.2381,-20.8248,-9.11275,-32.5759,-32.2749	1/1:44:0,42,1,0:0:0:42,1,0:1490,36,0:-134.088,-12.6433,0,-131.308,-9.81684,-131.007,-134.088,-12.6433,-131.308,-134.088	1/2:57:0,48,9,0:0:0:48,9,0:1691,324,0:-162.512,-25.069,-10.6196,-137.784,0,-135.075,-162.512,-25.069,-137.784,-162.512	1/2:66:0,50,7,3:0:0:50,7,3:1787,241,108:-164.131,-18.4331,-3.38161,-145.716,0,-143.609,-155.342,-9.63278,-136.928,-154.439	1/2:63:0,55,6,0:0:0:55,6,0:1976,216,0:-178.248,-17.1462,-0.589523,-161.14,0,-159.334,-178.248,-17.1462,-161.14,-178.248	1/2:32:0,23,6,1:0:0:23,6,1:824,216,36:-84.0564,-16.8464,-9.9227,-67.2328,0,-65.4266,-81.1211,-13.9082,-64.2974,-80.82	1/1:86:0,81,1,3:0:0:81,1,3:2899,36,103:-260.518,-24.3834,0,-257.77,-21.6372,-257.469,-252.174,-16.0431,-249.426,-251.271	1/1:75:0,70,2,1:0:0:70,2,1:2499,72,36:-224.724,-21.0721,0,-219.229,-15.57,-218.627,-221.794,-18.1354,-216.299,-221.493	1/1:34:0,29,0,1:0:0:29,0,1:1032,0,31:-92.8552,-8.72987,0,-92.8552,-8.72987,-92.8552,-90.3772,-6.25646,-90.3772,-90.0762	1/1:64:0,58,3,3:0:0:58,3,3:2076,97,108:-186.731,-17.4597,0,-179.232,-9.98218,-178.329,-177.926,-8.63035,-170.427,-177.023	1/1:36:0,35,0,1:0:0:35,0,1:1251,0,36:-112.538,-10.5361,0,-112.538,-10.5361,-112.538,-109.628,-7.27027,-109.628,-109.327	1/1:28:0,25,0,2:0:0:25,0,2:896,0,72:-80.6355,-7.52575,0,-80.6355,-7.52575,-80.6355,-74.7766,-1.59102,-74.7766,-74.1745	1/1:35:0,34,0,1:0:0:34,0,1:1201,0,36:-107.982,-10.235,0,-107.982,-10.235,-107.982,-105.053,-6.94682,-105.053,-104.752	1/1:23:0,22,0,0:0:0:22,0,0:784,0,0:-70.4601,-6.62266,0,-70.4601,-6.62266,-70.4601,-70.4601,-6.62266,-70.4601,-70.4601	1/1:71:0,64,4,0:0:0:64,4,0:2267,133,0:-203.957,-19.2659,0,-193.557,-8.8717,-192.353,-203.957,-19.2659,-193.557,-203.957	1/1:140:0,129,6,2:0:0:129,6,2:4600,206,72:-413.488,-38.8329,0,-397.89,-23.2265,-396.083,-407.67,-33.0058,-392.071,-407.068	0/1:62:23,30,3,1:23:816:30,3,1:1068,108,36:-80.0178,0,-57.4523,-78.5004,-58.0422,-144.08,-84.0049,-63.5465,-142.047,-150.187	1/3:42:1,36,0,4:1:36:36,0,4:1268,0,144:-111.579,-8.82614,-0.926466,-111.88,-11.7635,-114.816,-100.139,0,-103.074,-101.87	0/1:39:11,28,0,0:11:386:28,0,0:1008,0,0:-79.2869,0,-23.3358,-82.5982,-31.7647,-114.01,-82.5982,-31.7647,-114.01,-114.01	1/2:19:0,14,4,1:0:0:14,4,1:504,124,31:-50.2541,-9.07928,-4.86486,-41.1714,0,-39.9672,-47.7766,-6.59544,-38.6955,-47.4756	0/1:119:59,56,4,0:59:2094:56,4,0:1992,144,0:-144.475,0,-153.769,-151.116,-159.507,-320.527,-162.236,-170.627,-321.731,-332.852	0/1:139:72,62,1,3:72:2555:62,1,3:2220,36,108:-159.305,0,-189.519,-178.2,-205.403,-386.071,-172.252,-199.455,-377.644,-379.521	1/1:42:0,39,0,2:0:0:39,0,2:1400,0,69:-125.931,-11.7402,0,-125.931,-11.7402,-125.931,-120.62,-6.44569,-120.62,-120.018	1/1:143:0,132,5,3:0:0:132,5,3:4731,180,108:-425.603,-39.736,0,-411.703,-25.8337,-410.198,-416.794,-30.9194,-402.893,-415.891	1/1:60:0,57,1,1:0:0:57,1,1:2024,36,36:-181.833,-17.1587,0,-179.053,-14.3838,-178.752,-178.924,-14.2477,-176.144,-178.623	0/1:54:19,27,2,3:19:672:27,2,3:972,72,108:-73.4184,0,-46.6183,-73.4354,-49.0432,-127.567,-70.3322,-45.9395,-119.364,-124.163	1/2:43:3,21,12,2:3:108:21,12,2:756,430,72:-84.8343,-24.3426,-26.8353,-52.578,0,-57.7782,-79.919,-27.3378,-55.5724,-88.1298	1/2:72:0,49,21,2:0:0:49,21,2:1733,756,72:-199.084,-58.3714,-43.6209,-140.703,0,-134.381,-193.266,-52.5519,-134.884,-192.664	1/2:96:2,54,27,7:2:72:54,27,7:1932,948,250:-222.602,-66.2647,-55.8849,-151.054,0,-148.801,-202.875,-51.8088,-136.6,-206.643	1/3:126:0,62,10,30:0:0:62,10,30:2199,334,1044:-263.157,-84.6359,-65.972,-237.573,-59.0531,-234.563,-178.531,0,-152.948,-169.5	1/2:137:0,98,13,4:0:0:98,13,4:3498,456,1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chr08	6546867	.	CAGC	TAGT,CAGT	222957	PASS	AB=0.47401,0.521698;ABP=27.6162,20.1605;AC=152,36;AF=0.808511,0.191489;AN=188;AO=8220,2203;CIGAR=1X2M1X,3M1X;DP=10455;DPB=10455.2;DPRA=0,1.18091;EPP=17852.5,4786.76;EPPR=5.18177;GTI=0;LEN=4,1;MEANALT=1.76596,2.40909;MQM=58.3027,59.9396;MQMR=60;NS=94;NUMALT=2;ODDS=0.441892;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=36,0;PQR=0;PRO=0;QA=289518,78074;QR=27;RO=1;RPL=8220,2203;RPP=17852.5,4786.76;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=0,0;SAP=17852.5,4786.76;SAR=8220,2203;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:34:0,33,0:0:0:33,0:1162,0:-104.417,-9.93399,0,-104.417,-9.93399,-104.417	1/1:209:0,209,0:0:0:209,0:7304,0:-656.141,-62.9153,0,-656.141,-62.9153,-656.141	1/2:166:0,72,92:0:0:72,92:2511,3275:-471.047,-266.949,-245.275,-204.131,0,-176.437	1/1:309:0,309,0:0:0:309,0:10917,0:-981.848,-93.0183,0,-981.848,-93.0183,-981.848	1/2:108:0,60,48:0:0:60,48:2125,1690:-310.99,-137.933,-119.871,-173.41,0,-158.96	1/2:70:0,37,33:0:0:37,33:1298,1180:-202.081,-96.5741,-85.4359,-105.861,0,-95.9274	1/1:156:0,156,0:0:0:156,0:5506,0:-495.392,-46.9607,0,-495.392,-46.9607,-495.392	1/1:223:0,222,0:0:0:222,0:7803,0:-700.224,-66.8287,0,-700.224,-66.8287,-700.224	1/1:44:0,44,0:0:0:44,0:1536,0:-138.447,-13.2453,0,-138.447,-13.2453,-138.447	1/1:100:0,100,0:0:0:100,0:3534,0:-317.631,-30.103,0,-317.631,-30.103,-317.631	1/1:74:0,74,0:0:0:74,0:2615,0:-235.327,-22.2762,0,-235.327,-22.2762,-235.327	1/1:54:0,53,0:0:0:53,0:1885,0:-169.416,-15.9546,0,-169.416,-15.9546,-169.416	1/1:67:0,67,0:0:0:67,0:2359,0:-212.315,-20.169,0,-212.315,-20.169,-212.315	1/1:85:0,84,1:0:0:84,1:2931,36:-263.396,-25.2865,0,-260.459,-21.9893,-260.158	1/1:53:0,53,0:0:0:53,0:1866,0:-168.131,-15.9546,0,-168.131,-15.9546,-168.131	1/1:46:0,46,0:0:0:46,0:1628,0:-146.677,-13.8474,0,-146.677,-13.8474,-146.677	1/1:95:0,94,1:0:0:94,1:3298,36:-296.465,-28.2968,0,-293.528,-24.9996,-293.227	1/1:57:0,57,0:0:0:57,0:1990,0:-179.141,-17.1587,0,-179.141,-17.1587,-179.141	1/1:38:0,38,0:0:0:38,0:1333,0:-120.124,-11.4391,0,-120.124,-11.4391,-120.124	1/1:310:0,307,2:0:0:307,2:10858,72:-976.228,-92.4162,0,-970.353,-86.4941,-969.751	1/1:128:0,128,0:0:0:128,0:4458,0:-401.148,-38.5318,0,-401.148,-38.5318,-401.148	1/2:97:0,35,62:0:0:35,62:1228,2205:-279.423,-180.05,-169.514,-99.7245,0,-81.0606	1/1:36:0,34,1:0:0:34,1:1210,32:-108.852,-10.235,0,-106.274,-7.62352,-105.973	1/2:116:0,49,67:0:0:49,67:1717,2384:-334.261,-194.632,-179.881,-139.981,0,-119.812	1/1:41:0,41,0:0:0:41,0:1422,0:-128.173,-12.3422,0,-128.173,-12.3422,-128.173	1/2:394:0,202,190:0:0:202,190:7112,6709:-1125.18,-546.465,-485.657,-578.844,0,-521.648	1/2:219:0,111,106:0:0:111,106:3936,3812:-631.643,-311.095,-277.681,-320.632,0,-288.723	1/1:33:0,33,0:0:0:33,0:1164,0:-104.915,-9.93399,0,-104.915,-9.93399,-104.915	1/1:356:0,355,0:0:0:355,0:12540,0:-1126.94,-106.866,0,-1126.94,-106.866,-1126.94	1/1:217:0,211,4:0:0:211,4:7458,140:-670.868,-63.5173,0,-659.477,-52.1278,-658.273	1/2:146:0,89,56:0:0:89,56:3116,1942:-411.036,-157.82,-131.029,-253.262,0,-236.405	1/2:9:0,3,6:0:0:3,6:108,201:-25.3861,-16.6109,-15.7078,-9.12564,0,-7.31946	1/1:16:0,16,0:0:0:16,0:560,0:-50.6022,-4.81648,0,-50.6022,-4.81648,-50.6022	1/2:7:0,1,6:0:0:1,6:36,216:-20.9208,-17.9843,-17.6833,-3.29624,0,-1.49006	1/1:11:0,11,0:0:0:11,0:392,0:-35.6111,-3.31133,0,-35.6111,-3.31133,-35.6111	1/1:20:0,20,0:0:0:20,0:700,0:-63.2602,-6.0206,0,-63.2602,-6.0206,-63.2602	1/1:148:0,148,0:0:0:148,0:5223,0:-469.704,-44.5524,0,-469.704,-44.5524,-469.704	1/2:227:0,125,100:0:0:125,100:4395,3568:-648.508,-290.93,-253.301,-357.636,0,-327.533	1/2:70:0,30,40:0:0:30,40:1056,1421:-201.982,-116.144,-107.113,-86.1911,0,-74.1499	1/1:9:0,9,0:0:0:9,0:313,0:-28.5061,-2.70927,0,-28.5061,-2.70927,-28.5061	1/2:166:0,87,79:0:0:87,79:3073,2798:-478.387,-228.277,-202.087,-250.464,0,-226.682	1/2:31:0,12,18:0:0:12,18:427,629:-85.9563,-51.156,-47.5436,-34.7943,0,-29.3757	1/2:152:0,60,92:0:0:60,92:2105,3247:-435.759,-264.754,-246.693,-171.356,0,-143.661	1/2:58:0,32,26:0:0:32,26:1129,902:-165.579,-73.6636,-64.0306,-92.2649,0,-84.4381	1/1:66:0,66,0:0:0:66,0:2339,0:-210.423,-19.868,0,-210.423,-19.868,-210.423	1/2:82:0,26,56:0:0:26,56:900,1974:-234.103,-161.074,-153.247,-73.3772,0,-56.5196	1/2:193:0,112,80:0:0:112,80:3920,2821:-548.129,-229.745,-196.029,-318.437,0,-294.355	1/2:249:0,126,123:0:0:126,123:4417,4377:-715.823,-357.068,-319.138,-359.108,0,-322.082	1/1:93:0,93,0:0:0:93,0:3261,0:-293.15,-27.9958,0,-293.15,-27.9958,-293.15	1/1:182:0,182,0:0:0:182,0:6412,0:-576.824,-54.7875,0,-576.824,-54.7875,-576.824	1/1:136:0,135,0:0:0:135,0:4796,0:-430.403,-40.6391,0,-430.403,-40.6391,-430.403	1/2:14:0,9,5:0:0:9,5:324,180:-41.48,-15.0469,-12.3376,-26.7929,0,-25.2878	1/2:227:0,115,111:0:0:115,111:4086,3901:-650.143,-317.501,-282.883,-332.635,0,-299.221	1/2:51:0,31,20:0:0:31,20:1090,716:-147.466,-58.7471,-49.4152,-89.0741,0,-83.0535	1/2:17:0,8,9:0:0:8,9:280,319:-49.0963,-26.3421,-23.9339,-23.106,0,-20.3967	1/2:240:0,114,125:0:0:114,125:4003,4454:-688.547,-363.119,-328.802,-325.5,0,-287.871	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chr08	6546879	.	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chr08	6951565	.	G	A	127151	PASS	AB=0.455186;ABP=57.5056;AC=152;AF=0.808511;AN=188;AO=5913;CIGAR=1X;DP=7630;DPB=7630;DPRA=0;EPP=12842.9;EPPR=3716.23;GTI=1;LEN=1;MEANALT=1.06383;MQM=59.8791;MQMR=60;NS=94;NUMALT=1;ODDS=1.98024;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=211870;QR=61110;RO=1710;RPL=5913;RPP=12842.9;RPPR=3716.23;RPR=0;RUN=1;SAF=0;SAP=12842.9;SAR=5913;SRF=0;SRP=3716.23;SRR=1710;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:18:0,18:0:0:18:629:-56.9343,-5.41854,0	1/1:144:0,144:0:0:144:5156:-464.17,-43.3483,0	0/1:89:46,43:46:1632:43:1548:-112.821,0,-120.377	1/1:83:0,83:0:0:83:2978:-268.251,-24.9855,0	0/1:31:19,12:19:684:12:432:-29.8893,0,-52.5584	0/1:46:16,30:16:576:30:1080:-83.3424,0,-38.3276	1/1:47:0,47:0:0:47:1684:-151.845,-14.1484,0	1/1:154:0,154:0:0:154:5512:-496.203,-46.3586,0	1/1:33:0,33:0:0:33:1180:-106.491,-9.93399,0	1/1:62:0,62:0:0:62:2213:-199.325,-18.6639,0	1/1:158:1,157:1:36:157:5631:-503.273,-43.9645,0	1/1:73:0,73:0:0:73:2612:-235.328,-21.9752,0	1/1:67:0,67:0:0:67:2412:-217.335,-20.169,0	1/1:169:0,169:0:0:169:6054:-543.528,-50.8741,0	1/1:53:0,53:0:0:53:1893:-170.644,-15.9546,0	1/1:93:0,93:0:0:93:3348:-301.525,-27.9958,0	1/1:84:0,84:0:0:84:3007:-270.838,-25.2865,0	1/1:59:0,59:0:0:59:2124:-191.428,-17.7608,0	1/1:59:0,59:0:0:59:2124:-191.428,-17.7608,0	1/1:120:0,119:0:0:119:4271:-384.206,-35.8226,0	1/1:124:0,124:0:0:124:4460:-401.568,-37.3277,0	0/1:71:47,23:47:1680:23:828:-53.4118,0,-130.055	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/1:56:17,39:17:608:39:1396:-109.081,0,-38.1943	1/1:23:0,23:0:0:23:815:-73.6708,-6.92369,0	0/1:206:120,86:120:4296:86:3088:-216.135,0,-324.805	0/1:180:109,71:109:3916:71:2520:-172.865,0,-298.446	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:201:0,201:0:0:201:7209:-648.79,-60.507,0	1/1:140:3,136:3:108:136:4877:-429.035,-32.0155,0	0/1:50:19,31:19:684:31:1104:-84.6168,0,-46.8388	0/1:11:1,10:1:36:10:360:-29.433,0,-0.286945	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:27:0,27:0:0:27:972:-87.7864,-8.12781,0	1/1:130:0,129:0:0:129:4628:-416.362,-38.8329,0	0/1:231:116,115:116:4135:115:4130:-302.334,0,-302.797	0/1:116:57,59:57:2040:59:2102:-153.586,0,-148.953	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:82:46,36:46:1652:36:1296:-92.2549,0,-124.284	0/1:42:19,23:19:672:23:824:-61.8401,0,-48.1636	0/1:107:61,46:61:2170:46:1652:-116.758,0,-163.355	0/1:37:19,18:19:676:18:644:-47.1525,0,-50.0299	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	0/1:65:36,29:36:1288:29:1044:-74.7079,0,-96.6566	0/1:97:45,51:45:1616:51:1832:-135.902,0,-116.471	0/1:120:63,57:63:2256:57:2032:-147.026,0,-167.179	1/1:73:0,73:0:0:73:2605:-234.691,-21.9752,0	1/1:147:0,147:0:0:147:5288:-475.68,-44.2514,0	1/1:93:0,93:0:0:93:3348:-301.533,-27.9958,0	0/1:10:6,4:6:212:4:144:-10.3033,0,-16.4145	0/1:146:84,62:84:2985:62:2228:-156.833,0,-224.931	0/1:93:44,49:44:1554:49:1754:-130.145,0,-112.154	0/1:22:15,7:15:536:7:252:-16.4063,0,-41.9522	0/1:110:60,50:60:2148:50:1790:-128.268,0,-160.474	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:29:11,18:11:384:18:628:-48.1119,0,-26.1648	1/1:81:0,81:0:0:81:2908:-261.94,-24.3834,0	1/1:173:3,170:3:104:170:6108:-540.113,-42.3754,0	1/1:13:0,13:0:0:13:445:-40.3754,-3.91339,0	0/1:99:58,41:58:2080:41:1446:-100.602,0,-157.668	1/1:162:0,162:0:0:162:5802:-522.287,-48.7669,0	1/1:64:0,64:0:0:64:2300:-207.261,-19.2659,0	1/1:40:0,40:0:0:40:1440:-129.898,-12.0412,0	1/1:92:1,91:1:36:91:3263:-290.29,-24.0965,0	0/1:220:180,40:180:6439:40:1436:-63.3111,0,-513.37	1/1:62:1,61:1:36:61:2192:-193.941,-15.0656,0	1/1:62:0,62:0:0:62:2226:-200.604,-18.6639,0	1/1:132:0,132:0:0:132:4725:-425.407,-39.736,0	1/1:21:0,21:0:0:21:752:-68.0063,-6.32163,0	1/1:70:0,70:0:0:70:2497:-224.96,-21.0721,0	0/1:52:31,21:31:1107:21:756:-52.7137,0,-84.2866	1/1:139:0,137:0:0:137:4907:-441.422,-41.2411,0	1/1:64:0,64:0:0:64:2304:-207.62,-19.2659,0	1/1:107:0,107:0:0:107:3824:-344.354,-32.2102,0	1/1:115:0,115:0:0:115:4107:-369.536,-34.6185,0	0/1:12:6,6:6:216:6:216:-16.1782,0,-16.1782	1/1:73:0,73:0:0:73:2620:-236.026,-21.9752,0	0/1:77:32,45:32:1144:45:1605:-121.559,0,-80.0902	1/1:60:0,60:0:0:60:2152:-193.946,-18.0618,0	1/1:77:0,77:0:0:77:2746:-247.38,-23.1793,0	1/1:74:1,73:1:36:73:2611:-231.531,-18.6779,0	0/1:59:29,30:29:1035:30:1076:-79.3921,0,-75.7023	1/1:106:0,106:0:0:106:3784:-340.757,-31.9092,0	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	0/1:64:33,31:33:1184:31:1116:-81.4858,0,-87.6024	1/1:68:0,68:0:0:68:2432:-219.127,-20.47,0	0/1:154:73,81:73:2615:81:2907:-215.496,0,-189.238	0/1:286:154,132:154:5494:132:4710:-337.894,0,-408.493	0/1:32:20,12:20:716:12:423:-28.7721,0,-55.1348	1/1:43:0,43:0:0:43:1548:-139.557,-12.9443,0	1/1:48:0,48:0:0:48:1724:-155.441,-14.4494,0
chr08	6951575	.	T	C	126490	PASS	AB=0.455153;ABP=57.9353;AC=152;AF=0.808511;AN=188;AO=5929;CIGAR=1X;DP=7653;DPB=7653;DPRA=0;EPP=12877.7;EPPR=3744.46;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.8762;MQMR=60;NS=94;NUMALT=1;ODDS=1.73987;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=211365;QR=61683;RO=1723;RPL=5929;RPP=12877.7;RPPR=3744.46;RPR=0;RUN=1;SAF=0;SAP=12877.7;SAR=5929;SRF=0;SRP=3744.46;SRR=1723;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:18:0,18:0:0:18:625:-56.5706,-5.41854,0	1/1:140:0,140:0:0:140:4979:-448.246,-42.1442,0	0/1:89:46,43:46:1648:43:1503:-108.765,0,-121.817	1/1:84:0,84:0:0:84:2959:-266.54,-25.2865,0	0/1:31:18,13:18:648:13:468:-33.1277,0,-49.32	0/1:46:16,30:16:576:30:1065:-81.9889,0,-38.3276	1/1:48:0,48:0:0:48:1690:-152.38,-14.4494,0	1/1:157:0,157:0:0:157:5534:-498.176,-47.2617,0	1/1:34:0,34:0:0:34:1216:-109.711,-10.235,0	1/1:64:0,64:0:0:64:2296:-206.793,-19.2659,0	1/1:159:1,158:1:36:158:5630:-503.184,-44.2655,0	1/1:73:1,72:1:36:72:2592:-229.93,-18.3769,0	1/1:68:0,68:0:0:68:2436:-219.495,-20.47,0	1/1:169:0,169:0:0:169:6026:-542.281,-50.8741,0	1/1:53:0,53:0:0:53:1908:-171.995,-15.9546,0	1/1:93:0,93:0:0:93:3310:-298.106,-27.9958,0	1/1:82:0,82:0:0:82:2933:-264.18,-24.6845,0	1/1:58:0,58:0:0:58:2069:-186.479,-17.4597,0	1/1:61:0,61:0:0:61:2181:-196.554,-18.3628,0	1/1:118:0,118:0:0:118:4232:-381.059,-35.5215,0	1/1:124:0,124:0:0:124:4396:-395.809,-37.3277,0	0/1:70:47,23:47:1684:23:824:-53.4108,0,-130.775	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/1:55:17,38:17:612:38:1368:-106.864,0,-38.8568	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:207:117,90:117:4177:90:3221:-227.797,0,-313.798	0/1:184:111,73:111:3950:73:2597:-178.588,0,-300.301	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	1/1:198:0,198:0:0:198:7074:-636.635,-59.6039,0	1/1:140:3,137:3:108:137:4890:-430.169,-32.069,0	0/1:49:19,30:19:680:30:1065:-81.4069,0,-46.7787	0/1:10:1,9:1:36:9:324:-26.4956,0,-0.587975	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:10:4,6:4:140:6:212:-16.4145,0,-9.93428	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:27:0,27:0:0:27:972:-87.7864,-8.12781,0	1/1:130:0,130:0:0:130:4638:-417.581,-39.1339,0	0/1:235:116,119:116:4149:119:4166:-304.323,0,-302.85	0/1:115:57,58:57:2033:58:2088:-153.567,0,-148.622	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:84:48,36:48:1720:36:1281:-90.3002,0,-129.799	0/1:42:19,23:19:684:23:828:-62.2009,0,-49.2471	0/1:111:64,47:64:2304:47:1662:-116.449,0,-174.206	0/1:38:19,19:19:669:19:665:-48.7336,0,-49.0948	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	0/1:65:36,29:36:1296:29:1036:-73.987,0,-97.377	0/1:96:45,51:45:1612:51:1828:-135.902,0,-116.471	0/1:121:63,58:63:2245:58:2039:-147.351,0,-165.887	1/1:73:0,73:0:0:73:2605:-234.691,-21.9752,0	1/1:147:0,147:0:0:147:5239:-471.272,-44.2514,0	1/1:93:0,93:0:0:93:3295:-296.763,-27.9958,0	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:145:83,62:83:2965:62:2209:-155.424,0,-223.432	0/1:93:44,49:44:1584:49:1726:-127.611,0,-114.856	0/1:22:15,7:15:540:7:252:-16.4063,0,-42.3139	0/1:111:60,51:60:2137:51:1813:-130.031,0,-159.182	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	1/1:17:0,17:0:0:17:597:-54.0561,-5.11751,0	0/1:31:12,19:12:432:19:684:-52.5556,0,-29.8893	1/1:80:0,80:0:0:80:2868:-258.342,-24.0824,0	1/1:172:3,169:3:108:169:6061:-535.512,-41.702,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:101:59,42:59:2120:42:1489:-103.898,0,-160.664	1/1:163:0,162:0:0:162:5755:-517.7,-48.7669,0	1/1:64:0,64:0:0:64:2285:-205.91,-19.2659,0	1/1:39:0,39:0:0:39:1392:-125.579,-11.7402,0	1/1:93:1,92:1:36:92:3274:-291.279,-24.3975,0	0/1:221:181,40:181:6458:40:1417:-61.2977,0,-514.778	1/1:62:1,61:1:36:61:2196:-194.301,-15.0656,0	1/1:62:0,62:0:0:62:2201:-198.354,-18.6639,0	1/1:132:0,132:0:0:132:4676:-420.999,-39.736,0	1/1:22:0,22:0:0:22:780:-70.523,-6.62266,0	1/1:71:0,71:0:0:71:2525:-227.47,-21.3731,0	0/1:54:32,22:32:1148:22:792:-55.3501,0,-87.3742	1/1:140:0,140:0:0:140:4978:-446.727,-42.1442,0	1/1:65:0,65:0:0:65:2325:-209.508,-19.567,0	1/1:108:0,108:0:0:108:3869:-348.402,-32.5112,0	1/1:116:0,116:0:0:116:4156:-373.168,-34.9195,0	0/1:13:7,6:7:248:6:216:-15.8771,0,-18.7508	1/1:72:0,72:0:0:72:2547:-229.462,-21.6742,0	0/1:78:32,46:32:1148:46:1652:-125.488,0,-80.1495	1/1:60:0,60:0:0:60:2160:-194.665,-18.0618,0	1/1:78:0,78:0:0:78:2808:-252.954,-23.4803,0	1/1:75:0,75:0:0:75:2677:-241.065,-22.5773,0	0/1:59:31,28:31:1108:28:974:-70.2074,0,-82.2702	1/1:104:0,104:0:0:104:3717:-334.73,-31.3071,0	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	0/1:63:33,30:33:1188:30:1080:-78.5484,0,-88.2637	1/1:66:0,66:0:0:66:2353:-212.019,-19.868,0	0/1:153:73,80:73:2628:80:2872:-212.648,0,-190.709	0/1:289:158,131:158:5676:131:4696:-335.727,0,-423.959	0/1:31:20,11:20:720:11:396:-26.6508,0,-55.7968	1/1:44:0,44:0:0:44:1565:-141.083,-13.2453,0	1/1:47:0,47:0:0:47:1687:-152.115,-14.1484,0
chr08	7178634	.	TACCCCC	CAGCCCA,CAGCCCC	142024	PASS	AB=0.731696,0.255792;ABP=1009.25,1120.86;AC=135,53;AF=0.718085,0.281915;AN=188;AO=5857,1004;CIGAR=1X1M1X3M1X,1X1M1X4M;DP=6929;DPB=6929.57;DPRA=2.54342,1.20522;EPP=12721.3,2183.17;EPPR=0;GTI=10;LEN=7,7;MEANALT=2.61111,2.59091;MQM=59.6076,45.0697;MQMR=0;NS=94;NUMALT=2;ODDS=2220.39;PAIRED=0,0;PAIREDR=0;PAO=1,1;PQA=34.5,34.5;PQR=0;PRO=0;QA=205962,35324;QR=0;RO=0;RPL=5857,1004;RPP=12721.3,2183.17;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=12721.3,2183.17;SAR=5857,1004;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:29:0,28,1:0:0:28,1:997,36:-89.6868,-8.42884,0,-86.8555,-5.24917,-86.5544	1/1:72:0,68,1:0:0:68,1:2415,25:-217.198,-20.47,0,-215.521,-18.8247,-215.22	1/1:91:0,86,5:0:0:86,5:3051,178:-274.438,-25.8886,0,-260.142,-11.2414,-258.637	1/1:253:0,233,18:0:0:233,18:8194,638:-737.129,-70.14,0,-687.153,-20.1599,-681.735	1/2:21:0,17,4:0:0:17,4:598,144:-60.3921,-11.7105,-6.59299,-49.0312,0,-47.827	1/2:19:0,17,2:0:0:17,2:606,70:-55.4487,-6.04527,-0.927757,-49.754,0,-49.1519	1/1:97:0,95,1:0:0:95,1:3310,36:-297.756,-28.5979,0,-294.976,-25.8262,-294.675	1/2:127:0,108,18:0:0:108,18:3778,646:-359.256,-51.9918,-19.4805,-307.259,0,-301.841	1/2:92:0,78,12:0:0:78,12:2729,423:-255.878,-33.8864,-10.4061,-221.986,0,-218.373	1/1:102:0,99,0:0:0:99,0:3452,0:-310.42,-29.802,0,-310.42,-29.802,-310.42	1/2:75:0,56,19:0:0:56,19:1989,684:-215.87,-53.7989,-36.9412,-162.419,0,-156.7	1/1:100:0,97,3:0:0:97,3:3418,108:-307.425,-29.1999,0,-298.824,-20.2874,-297.921	1/1:72:0,66,6:0:0:66,6:2345,211:-210.949,-19.868,0,-194.254,-2.82948,-192.448	1/2:70:0,62,7:0:0:62,7:2176,244:-196.327,-19.2849,-0.62106,-177.027,0,-174.919	1/1:78:0,76,2:0:0:76,2:2711,72:-243.864,-22.8783,0,-238.304,-16.9755,-237.702	1/1:65:0,58,6:0:0:58,6:2015,216:-181.271,-17.4597,0,-164.034,-0.14399,-162.228	1/1:58:0,57,1:0:0:57,1:1994,28:-179.436,-17.1587,0,-177.489,-14.9604,-177.188	1/1:43:0,39,4:0:0:39,4:1386,136:-124.683,-11.7402,0,-114.031,-0.755973,-112.826	1/2:50:0,43,7:0:0:43,7:1534,246:-144.799,-19.7532,-6.8089,-125.39,0,-123.283	1/1:118:0,111,6:0:0:111,6:3926,216:-353.176,-33.4143,0,-336.338,-16.5881,-334.531	1/1:141:0,139,1:0:0:139,1:4861,36:-437.256,-41.8432,0,-434.448,-39.0421,-434.147	1/2:11:0,8,2:0:0:8,2:274,72:-27.8668,-5.60848,-3.20024,-22.305,0,-21.7029	1/1:58:0,56,1:0:0:56,1:1972,36:-177.395,-16.8577,0,-174.563,-14.0318,-174.262	1/1:38:0,34,3:0:0:34,3:1191,105:-107.159,-10.235,0,-98.7451,-1.72758,-97.842	1/1:66:0,63,3:0:0:63,3:2228,108:-200.421,-18.9649,0,-191.997,-10.1954,-191.094	1/1:105:0,101,2:0:0:101,2:3529,72:-317.482,-30.404,0,-311.764,-24.6658,-311.162	1/1:89:0,83,6:0:0:83,6:2910,216:-261.768,-24.9855,0,-244.92,-7.79197,-243.114	1/1:34:0,32,2:0:0:32,2:1142,72:-102.744,-9.63296,0,-97.1282,-3.67149,-96.5261	1/1:219:0,211,6:0:0:211,6:7410,214:-665.861,-63.5173,0,-649.152,-46.8202,-647.346	1/1:78:0,77,1:0:0:77,1:2708,36:-243.58,-23.1793,0,-240.772,-20.0258,-240.471	1/2:30:0,27,3:0:0:27,3:955,108:-86.6278,-8.84602,-0.718213,-78.1305,0,-77.2274	2/2:11:0,0,11:0:0:0,11:0,387:-33.9895,-33.9895,-33.9895,-3.31133,-3.31133,0	1/2:58:0,10,48:0:0:10,48:356,1702:-163.775,-134.767,-131.757,-29.3617,0,-14.9122	2/2:72:0,2,70:0:0:2,70:72,2452:-215.137,-209.262,-208.66,-21.0721,-14.8374,0	2/2:65:0,3,62:0:0:3,62:108,2172:-191.49,-182.677,-181.774,-18.6639,-9.49178,0	1/2:65:0,11,54:0:0:11,54:394,1883:-181.863,-149.728,-146.416,-32.4902,0,-16.2346	1/1:204:0,197,5:0:0:197,5:6926,178:-623.068,-59.3029,0,-608.719,-44.9337,-607.214	1/2:30:0,25,5:0:0:25,5:886,178:-86.6179,-14.4667,-6.9409,-72.4996,0,-70.9944	1/2:69:0,40,29:0:0:40,29:1432,1011:-196.803,-80.0263,-67.9851,-117.123,0,-108.393	2/2:20:0,1,19:0:0:1,19:36,665:-57.8815,-54.943,-54.642,-5.71957,-2.42233,0	1/2:93:0,81,11:0:0:81,11:2827,388:-260.184,-30.2568,-5.87339,-229.91,0,-226.598	1/2:26:0,20,5:0:0:20,5:690,167:-68.4943,-12.5521,-6.53154,-55.9095,0,-54.4043	1/2:66:0,48,17:0:0:48,17:1688,589:-183.504,-46.0895,-31.64,-137.396,0,-132.278	1/2:28:0,21,7:0:0:21,7:741,250:-80.1624,-19.8265,-13.5049,-60.6811,0,-58.5739	1/1:62:0,58,3:0:0:58,3:2022,108:-181.82,-17.4597,0,-173.479,-9.10221,-172.576	1/1:23:0,23,0:0:0:23,0:813,0:-73.4911,-6.92369,0,-73.4911,-6.92369,-73.4911	1/2:60:0,41,17:0:0:41,17:1451,603:-165.915,-47.7293,-35.387,-118.235,0,-113.118	1/1:69:0,65,4:0:0:65,4:2301,144:-206.992,-19.567,0,-195.872,-8.10374,-194.668	1/1:87:0,86,0:0:0:86,0:3047,0:-274.102,-25.8886,0,-274.102,-25.8886,-274.102	1/2:107:0,92,14:0:0:92,14:3219,504:-302.057,-40.1739,-12.4791,-261.876,0,-257.662	1/2:72:0,59,13:0:0:59,13:2107,451:-208.504,-36.7156,-18.9549,-172.135,0,-168.221	2/2:44:0,0,44:0:0:0,44:0,1564:-135.37,-135.37,-135.37,-13.2453,-13.2453,0	1/2:67:0,47,20:0:0:47,20:1647,693:-189.2,-55.1915,-41.0431,-134.35,0,-128.33	1/2:29:0,20,9:0:0:20,9:709,322:-83.7904,-26.0265,-20.0059,-58.1155,0,-55.4062	2/2:20:0,0,20:0:0:0,20:0,710:-62.9275,-62.9275,-62.9275,-6.0206,-6.0206,0	1/2:97:0,74,23:0:0:74,23:2591,810:-274.531,-63.7293,-41.4531,-211.143,0,-204.22	1/2:12:0,8,4:0:0:8,4:286,144:-34.7916,-11.4632,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chr08	7198860	.	CTA	GTC,CTC	274243	PASS	AB=0.482599,0.514987;ABP=16.0841,12.7083;AC=152,36;AF=0.808511,0.191489;AN=188;AO=10175,2576;CIGAR=1X1M1X,2M1X;DP=12777;DPB=12777.3;DPRA=0,1.45559;EPP=22097.7,5596.72;EPPR=0;GTI=0;LEN=3,1;MEANALT=1.73404,2.30435;MQM=59.9857,59.9507;MQMR=0;NS=94;NUMALT=2;ODDS=3.84696;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=68,0;PQR=0;PRO=0;QA=358626,91641;QR=0;RO=0;RPL=10175,2576;RPP=22097.7,5596.72;RPPR=0;RPR=0,0;RUN=1,1;SAF=10175,2576;SAP=22097.7,5596.72;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:45:0,45,0:0:0:45,0:1558,0:-140.507,-13.5464,0,-140.507,-13.5464,-140.507	1/1:216:0,216,0:0:0:216,0:7633,0:-687.014,-65.0225,0,-687.014,-65.0225,-687.014	1/2:214:0,101,113:0:0:101,113:3521,3990:-611.618,-325.273,-294.869,-286.696,0,-252.679	1/1:416:0,415,1:0:0:415,1:14591,36:-1312.6,-124.927,0,-1309.66,-121.63,-1309.36	1/2:74:0,38,36:0:0:38,36:1349,1243:-211.252,-101.331,-89.8919,-110.271,0,-99.4334	1/2:61:0,36,25:0:0:36,25:1244,891:-174.052,-72.983,-62.1459,-101.421,0,-93.8952	1/1:156:0,156,0:0:0:156,0:5538,0:-498.547,-46.9607,0,-498.547,-46.9607,-498.547	1/1:275:0,275,0:0:0:275,0:9626,0:-866.313,-82.7833,0,-866.313,-82.7833,-866.313	1/1:122:0,121,0:0:0:121,0:4275,0:-384.572,-36.4246,0,-384.572,-36.4246,-384.572	1/1:138:0,138,0:0:0:138,0:4873,0:-438.726,-41.5421,0,-438.726,-41.5421,-438.726	1/1:52:0,52,0:0:0:52,0:1834,0:-165.339,-15.6536,0,-165.339,-15.6536,-165.339	1/1:84:0,84,0:0:0:84,0:2948,0:-265.556,-25.2865,0,-265.556,-25.2865,-265.556	1/1:83:0,83,0:0:0:83,0:2935,0:-264.385,-24.9855,0,-264.385,-24.9855,-264.385	1/1:92:0,92,0:0:0:92,0:3232,0:-291.105,-27.6948,0,-291.105,-27.6948,-291.105	1/1:78:0,77,0:0:0:77,0:2721,0:-244.804,-23.1793,0,-244.804,-23.1793,-244.804	1/1:71:0,71,0:0:0:71,0:2494,0:-224.713,-21.3731,0,-224.713,-21.3731,-224.713	1/1:105:0,105,0:0:0:105,0:3700,0:-333.207,-31.6082,0,-333.207,-31.6082,-333.207	1/1:57:0,56,0:0:0:56,0:1961,0:-176.405,-16.8577,0,-176.405,-16.8577,-176.405	1/1:31:0,30,0:0:0:30,0:1052,0:-94.6295,-9.0309,0,-94.6295,-9.0309,-94.6295	1/1:345:0,345,0:0:0:345,0:12104,0:-1089.23,-103.855,0,-1089.23,-103.855,-1089.23	1/1:225:0,224,1:0:0:224,1:7895,36:-710.225,-67.4307,0,-707.287,-64.1335,-706.986	1/2:233:0,80,151:0:0:80,151:2840,5402:-671.904,-440.504,-416.422,-231.406,0,-185.95	1/1:163:0,161,0:0:0:161,0:5665,0:-509.657,-48.4658,0,-509.657,-48.4658,-509.657	1/2:120:0,82,38:0:0:82,38:2900,1330:-344.756,-108.556,-83.8718,-236.55,0,-225.111	1/1:157:0,157,0:0:0:157,0:5497,0:-494.856,-47.2617,0,-494.856,-47.2617,-494.856	1/2:425:0,246,179:0:0:246,179:8713,6399:-1231.87,-522.109,-448.055,-710.113,0,-656.229	1/2:319:0,174,144:0:0:174,144:6109,5142:-916.415,-419.231,-366.852,-497.267,0,-453.919	1/1:42:0,42,0:0:0:42,0:1478,0:-133.312,-12.6433,0,-133.312,-12.6433,-133.312	1/1:411:0,410,1:0:0:410,1:14514,36:-1305.66,-123.422,0,-1302.72,-120.125,-1302.42	1/1:169:0,164,5:0:0:164,5:5792,180:-521.042,-49.3689,0,-506.354,-34.322,-504.849	1/2:122:0,63,59:0:0:63,59:2190,2112:-350.589,-172.543,-153.578,-178.399,0,-160.638	1/2:16:0,5,11:0:0:5,11:177,396:-47.0874,-32.6714,-31.1663,-14.7717,0,-11.4604	1/1:17:0,17,0:0:0:17,0:583,0:-52.7906,-5.11751,0,-52.7906,-5.11751,-52.7906	1/2:6:0,2,4:0:0:2,4:72,144:-17.9843,-12.1095,-11.5074,-6.23466,0,-5.03054	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:238:0,238,0:0:0:238,0:8427,0:-758.443,-71.6451,0,-758.443,-71.6451,-758.443	1/2:224:0,73,151:0:0:73,151:2579,5366:-647.647,-437.619,-415.643,-210.382,0,-164.927	1/2:66:0,35,31:0:0:35,31:1251,1088:-190.9,-88.8945,-78.3585,-102.359,0,-93.0274	1/1:6:0,6,0:0:0:6,0:209,0:-19.1505,-1.80618,0,-19.1505,-1.80618,-19.1505	1/2:210:0,110,98:0:0:110,98:3885,3484:-600.343,-283.964,-250.851,-316.427,0,-286.926	1/2:40:0,19,21:0:0:19,21:672,756:-116.776,-62.0456,-56.326,-55.0873,0,-48.7657	1/2:197:0,95,102:0:0:95,102:3342,3631:-568.326,-296.279,-267.681,-272.401,0,-241.696	1/2:113:0,56,57:0:0:56,57:1970,2028:-325.996,-165.634,-148.776,-160.716,0,-143.557	1/1:80:0,80,0:0:0:80,0:2819,0:-253.948,-24.0824,0,-253.948,-24.0824,-253.948	1/2:151:0,101,50:0:0:101,50:3553,1778:-434.471,-145.25,-114.846,-289.575,0,-274.523	1/2:209:0,97,112:0:0:97,112:3429,4011:-606.731,-327.464,-298.264,-279.623,0,-245.908	1/2:235:0,125,109:0:0:125,109:4403,3857:-672.696,-314.232,-276.603,-358.537,0,-325.724	1/1:187:0,187,0:0:0:187,0:6596,0:-593.367,-56.2926,0,-593.367,-56.2926,-593.367	1/1:164:0,163,1:0:0:163,1:5761,36:-518.25,-49.0679,0,-515.312,-45.7706,-515.011	1/1:263:0,263,0:0:0:263,0:9335,0:-840.124,-79.1709,0,-840.124,-79.1709,-840.124	1/2:14:0,10,4:0:0:10,4:339,140:-39.2198,-11.7405,-8.73016,-27.8261,0,-26.622	1/2:170:0,76,92:0:0:76,92:2713,3285:-489.081,-267.902,-245.023,-221.263,0,-193.568	1/2:98:0,29,69:0:0:29,69:1017,2447:-282.471,-199.711,-190.982,-83.1113,0,-62.3403	1/2:23:0,14,9:0:0:14,9:475,309:-63.9483,-25.4314,-21.217,-38.8585,0,-36.1492	1/2:217:0,107,110:0:0:107,110:3784,3918:-627.895,-319.7,-287.489,-308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chr08	7198869	.	CAG	TAA	70167.3	PASS	AB=0.436475;ABP=283.033;AC=36;AF=0.191489;AN=188;AO=3508;CIGAR=1X1M1X;DP=22494;DPB=22498.3;DPRA=1.324;EPP=7620.54;EPPR=41113.3;GTI=2;LEN=3;MEANALT=1.68085;MQM=59.9416;MQMR=59.9882;NS=94;NUMALT=1;ODDS=6.3581;PAIRED=0;PAIREDR=0;PAO=13;PQA=266;PQR=0;PRO=0;QA=122027;QR=658593;RO=18932;RPL=2593;RPP=1745.94;RPPR=202.861;RPR=915;RUN=1;SAF=2593;SAP=1745.94;SAR=915;SRF=10126;SRP=202.861;SRR=8806;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/0:97:96,0:96:3306:0:0:0,-28.8989,-297.405	0/0:282:282,0:282:9858:0:0:0,-84.8905,-887.193	0/1:326:208,116:208:7261:116:4043:-266.287,0,-555.782	0/0:644:641,1:641:22286:1:28:0,-190.768,-2002.39	0/1:116:61,55:61:2133:55:1936:-139.596,0,-157.316	0/1:76:51,25:51:1779:25:878:-56.4574,0,-137.513	0/0:382:381,0:381:13197:0:0:0,-114.692,-1187.21	0/0:535:532,0:532:18387:0:0:0,-160.148,-1654.04	0/0:204:203,0:203:7107:0:0:0,-61.1091,-639.347	0/0:252:252,0:252:8754:0:0:0,-75.8596,-787.878	0/0:109:109,0:109:3748:0:0:0,-32.8123,-337.528	0/0:197:197,0:197:6858:0:0:0,-59.3029,-617.31	0/0:158:158,0:158:5552:0:0:0,-47.5627,-499.814	0/0:155:155,0:155:5408:0:0:0,-46.6596,-486.863	0/0:145:145,0:145:5055:0:0:0,-43.6493,-455.106	0/0:125:125,0:125:4375:0:0:0,-37.6287,-393.934	0/0:129:129,0:129:4458:0:0:0,-38.8329,-401.404	0/0:95:95,0:95:3258:0:0:0,-28.5978,-293.446	0/0:61:61,0:61:2143:0:0:0,-18.3628,-193.137	0/0:608:608,0:608:21125:0:0:0,-183.026,-1900.8	0/0:435:434,1:434:15148:1:36:0,-127.35,-1359.49	0/1:354:138,214:138:4806:214:7394:-559.279,0,-326.45	0/0:233:231,0:231:8014:0:0:0,-69.5379,-720.942	0/1:218:143,74:143:4965:74:2590:-167.666,0,-381.33	0/0:279:278,0:278:9697:0:0:0,-83.6863,-872.327	0/1:684:386,298:386:13393:298:10411:-731.026,0,-999.306	0/1:734:434,298:434:15180:298:10277:-704.166,0,-1145.16	0/0:72:72,0:72:2517:0:0:0,-21.6742,-226.781	0/0:724:722,1:722:25206:1:34:0,-214.596,-2264.48	0/0:334:325,9:325:11278:9:310:0,-72.3114,-986.71	0/1:174:116,58:116:3989:58:2067:-133.912,0,-306.825	0/1:24:8,16:8:288:16:556:-43.1424,0,-19.0427	0/0:62:62,0:62:2135:0:0:0,-18.6639,-192.415	0/1:9:5,4:5:178:4:142:-10.4199,0,-13.6594	0/0:8:8,0:8:286:0:0:0,-2.40824,-26.0855	0/0:29:29,0:29:1028:0:0:0,-8.72987,-92.8323	0/0:430:429,0:429:14866:0:0:0,-129.142,-1337.41	0/1:354:144,209:144:5004:209:7289:-549.48,0,-343.913	0/1:96:66,30:66:2313:30:1049:-65.8196,0,-179.533	0/0:10:10,0:10:357:0:0:0,-3.0103,-32.4721	0/1:345:186,159:186:6470:159:5534:-394.344,0,-478.544	0/1:66:29,37:29:1014:37:1292:-96.7128,0,-71.7043	0/1:371:203,167:203:7035:167:5801:-410.552,0,-521.572	0/1:135:79,56:79:2739:56:1965:-136.487,0,-206.117	0/0:146:146,0:146:5073:0:0:0,-43.9504,-456.727	0/1:332:208,123:208:7241:123:4251:-282.853,0,-551.842	0/1:289:177,112:177:6175:112:3925:-266.21,0,-468.623	0/1:320:209,109:209:7252:109:3799:-246.1,0,-556.741	0/0:291:291,0:291:10119:0:0:0,-87.5997,-910.679	0/0:323:319,1:319:11196:1:36:0,-93.0837,-1003.98	0/0:512:510,0:510:17694:0:0:0,-153.525,-1591.78	0/1:19:14,4:14:488:4:144:-7.53525,0,-38.4727	0/1:276:185,91:185:6476:91:3202:-205.135,0,-499.674	0/1:166:73,93:73:2521:93:3249:-242.655,0,-177.17	0/1:35:25,10:25:876:10:342:-20.5724,0,-68.5927	0/1:355:186,167:186:6528:167:5706:-407.08,0,-481.019	0/1:93:46,45:46:1595:45:1530:-110.28,0,-116.141	0/0:32:32,0:32:1107:0:0:0,-9.63296,-99.9327	0/1:41:17,24:17:579:24:844:-63.9368,0,-40.0881	0/0:196:196,0:196:6799:0:0:0,-59.0019,-611.998	0/0:183:181,0:181:6233:0:0:0,-54.4864,-560.756	0/0:18:18,0:18:637:0:0:0,-5.41854,-57.6589	0/1:609:302,306:302:10538:306:10667:-776.675,0,-765.084	0/0:554:549,2:549:19212:2:70:0,-159.574,-1722.03	0/0:244:244,0:244:8502:0:0:0,-73.4513,-765.203	0/0:308:308,0:308:10675:0:0:0,-92.7172,-960.697	0/0:389:387,1:387:13414:1:36:0,-113.561,-1203.46	0/1:269:151,116:151:5252:116:4036:-282.688,0,-392.093	0/0:73:73,0:73:2548:0:0:0,-21.9752,-229.57	0/0:297:296,0:296:10322:0:0:0,-89.1049,-928.574	0/0:143:143,0:143:4931:0:0:0,-43.0473,-443.956	0/0:54:54,0:54:1855:0:0:0,-16.2556,-167.225	0/0:382:382,0:382:13210:0:0:0,-114.993,-1188.75	0/1:148:95,53:95:3303:53:1819:-119.435,0,-252.939	0/0:342:341,0:341:11814:0:0:0,-102.651,-1062.85	0/0:423:423,0:423:14751:0:0:0,-127.336,-1327.37	0/0:241:241,0:241:8431:0:0:0,-72.5482,-758.816	0/0:297:295,1:295:10178:1:36:0,-85.8664,-912.071	0/1:31:19,12:19:652:12:415:-28.3486,0,-49.6678	0/0:332:330,1:330:11548:1:36:0,-96.4025,-1035.63	0/1:276:153,122:153:5331:122:4257:-300.363,0,-396.981	0/0:523:520,2:520:18165:2:72:0,-150.661,-1627.66	0/0:161:161,0:161:5595:0:0:0,-48.4658,-503.686	0/0:163:163,0:163:5696:0:0:0,-49.0679,-512.773	0/1:140:86,53:86:2958:53:1874:-126.724,0,-224.337	0/0:271:269,1:269:9394:1:36:0,-78.0197,-841.874	0/0:74:74,0:74:2574:0:0:0,-22.2762,-231.914	0/1:127:89,38:89:3057:38:1314:-80.3262,0,-237.134	0/0:174:174,0:174:6036:0:0:0,-52.3792,-543.363	0/1:109:53,56:53:1826:56:1947:-142.692,0,-131.801	0/1:159:77,81:77:2648:81:2788:-203.24,0,-190.644	0/1:113:57,56:57:2005:56:1964:-143.019,0,-146.707	0/0:320:319,0:319:11075:0:0:0,-96.0286,-996.32	0/0:245:245,0:245:8554:0:0:0,-73.7523,-769.882
chr08	8223701	.	A	G	182160	PASS	AB=0.492881;ABP=4.61809;AC=152;AF=0.808511;AN=188;AO=8429;CIGAR=1X;DP=10304;DPB=10304;DPRA=0;EPP=18297.7;EPPR=4057.15;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.9614;MQMR=59.984;NS=94;NUMALT=1;ODDS=10.3343;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=300096;QR=66909;RO=1871;RPL=8429;RPP=18306.4;RPPR=4057.15;RPR=0;RUN=1;SAF=8428;SAP=18297.7;SAR=1;SRF=1871;SRP=4065.84;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:196:1,194:1:36:194:6924:-619.648,-55.4425,0	0/1:130:59,71:59:2116:71:2529:-188.723,0,-151.575	1/1:240:0,239:0:0:239:8497:-764.415,-71.9462,0	0/1:103:50,53:50:1796:53:1883:-138.742,0,-130.916	0/1:84:51,33:51:1832:33:1180:-81.2215,0,-139.793	1/1:141:0,141:0:0:141:5055:-455.094,-42.4452,0	1/1:282:0,282:0:0:282:10079:-906.891,-84.8905,0	1/1:114:0,114:0:0:114:4077:-367.113,-34.3174,0	1/1:129:2,127:2:72:127:4503:-398.594,-31.9961,0	1/1:82:0,82:0:0:82:2924:-263.394,-24.6845,0	1/1:63:1,62:1:36:62:2201:-194.756,-15.3666,0	1/1:78:0,78:0:0:78:2784:-250.801,-23.4803,0	1/1:111:0,111:0:0:111:3956:-356.194,-33.4143,0	1/1:86:0,86:0:0:86:3063:-275.899,-25.8886,0	1/1:55:0,55:0:0:55:1959:-176.585,-16.5567,0	1/1:85:0,85:0:0:85:3023:-272.301,-25.5876,0	1/1:94:0,94:0:0:94:3351:-301.807,-28.2968,0	1/1:50:0,50:0:0:50:1792:-161.562,-15.0515,0	1/1:205:0,205:0:0:205:7327:-659.48,-61.7112,0	1/1:145:0,145:0:0:145:5175:-465.859,-43.6494,0	0/1:54:36,18:36:1277:18:644:-42.035,0,-98.9755	1/1:44:0,43:0:0:43:1540:-138.533,-12.9443,0	0/1:59:27,32:27:968:32:1131:-84.337,0,-69.6766	1/1:38:0,38:0:0:38:1355:-122.25,-11.4391,0	0/1:374:179,195:179:6411:195:6958:-513.702,0,-464.492	0/1:151:94,57:94:3344:57:1987:-133.646,0,-255.723	1/1:35:0,35:0:0:35:1248:-112.625,-10.5361,0	1/1:172:0,172:0:0:172:6164:-554.858,-51.7772,0	1/1:214:8,206:8:288:206:7314:-632.045,-38.153,0	0/1:84:45,39:45:1604:39:1387:-99.8416,0,-119.364	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/1:7:4,3:4:136:3:108:-7.96796,0,-10.4683	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:216:0,216:0:0:216:7669:-690.217,-65.0225,0	0/1:217:99,118:99:3516:118:4175:-310.61,0,-251.326	0/1:53:31,22:31:1107:22:773:-53.9349,0,-83.9856	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:152:79,73:79:2808:73:2601:-188.581,0,-207.204	0/1:25:12,13:12:432:13:460:-34.2096,0,-31.6954	0/1:142:57,85:57:2044:85:3047:-231.712,0,-141.486	0/1:83:38,45:38:1364:45:1596:-118.945,0,-98.0752	1/1:72:1,71:1:36:71:2531:-224.426,-18.0759,0	0/1:72:41,31:41:1468:31:1101:-77.7256,0,-110.742	0/1:210:92,118:92:3304:118:4155:-310.916,0,-234.362	0/1:220:87,133:87:3124:133:4737:-360.263,0,-215.159	1/1:114:0,114:0:0:114:4065:-366.036,-34.3174,0	1/1:209:0,208:0:0:208:7425:-668.025,-62.6142,0	1/1:128:0,128:0:0:128:4536:-408.407,-38.5318,0	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/1:129:63,66:63:2259:66:2364:-174.185,0,-164.739	0/1:49:27,22:27:972:22:792:-56.8552,0,-73.0474	0/1:31:15,16:15:528:16:572:-42.4815,0,-38.5194	0/1:132:69,63:69:2472:63:2252:-163.203,0,-182.998	0/1:40:22,18:22:780:18:639:-45.797,0,-58.4818	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:32:20,12:20:720:12:421:-28.5905,0,-55.4958	1/1:77:0,77:0:0:77:2745:-247.291,-23.1793,0	1/1:152:2,150:2:72:150:5344:-474.257,-38.9198,0	1/1:11:0,11:0:0:11:378:-34.3491,-3.31133,0	0/1:160:81,79:81:2884:79:2796:-203.715,0,-211.63	1/1:280:0,280:0:0:280:9977:-897.858,-84.2884,0	1/1:98:0,98:0:0:98:3495:-314.758,-29.5009,0	1/1:109:0,109:0:0:109:3859:-347.506,-32.8123,0	1/1:139:1,138:1:36:138:4920:-439.323,-38.2449,0	0/1:144:82,62:82:2932:62:2215:-156.248,0,-220.766	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	1/1:94:0,94:0:0:94:3342:-300.998,-28.2968,0	1/1:127:1,126:1:36:126:4468:-398.691,-34.6325,0	1/1:50:0,50:0:0:50:1783:-160.751,-15.0515,0	1/1:64:0,64:0:0:64:2288:-206.182,-19.2659,0	0/1:77:49,28:49:1752:28:1004:-67.4966,0,-134.785	1/1:183:1,182:1:36:182:6462:-578.069,-51.4902,0	1/1:201:0,201:0:0:201:7170:-645.357,-60.507,0	1/1:184:0,184:0:0:184:6585:-592.729,-55.3895,0	1/1:185:1,184:1:36:184:6553:-585.311,-52.0923,0	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.4449	1/1:157:0,157:0:0:157:5591:-503.313,-47.2617,0	0/1:163:87,76:87:3120:76:2711:-195.166,0,-231.958	1/1:262:0,262:0:0:262:9328:-839.485,-78.8699,0	1/1:126:0,126:0:0:126:4468:-402.289,-37.9298,0	1/1:101:0,101:0:0:101:3582:-322.589,-30.404,0	0/1:106:57,49:57:2029:49:1739:-124.885,0,-150.971	1/1:193:0,193:0:0:193:6833:-615.043,-58.0988,0	1/1:46:0,46:0:0:46:1614:-145.545,-13.8474,0	0/1:89:42,47:42:1499:47:1664:-123.256,0,-108.412	1/1:83:0,83:0:0:83:2939:-264.715,-24.9855,0	0/1:71:31,40:31:1107:40:1424:-107.085,0,-78.567	0/1:119:69,50:69:2476:50:1771:-123.85,0,-187.271	0/1:69:43,26:43:1540:26:909:-61.3523,0,-118.122	1/1:109:0,109:0:0:109:3904:-351.536,-32.8123,0	1/1:149:0,149:0:0:149:5302:-477.316,-44.8535,0
chr08	8223757	.	G	T	41129.5	PASS	AB=0.506784;ABP=4.92524;AC=36;AF=0.191489;AN=188;AO=2449;CIGAR=1X;DP=12141;DPB=12141;DPRA=1.26338;EPP=5320.95;EPPR=21046.7;GTI=0;LEN=1;MEANALT=1;MQM=59.9334;MQMR=59.9867;NS=94;NUMALT=1;ODDS=4.96204;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=87369;QR=346055;RO=9691;RPL=2449;RPP=5320.95;RPPR=21046.7;RPR=0;RUN=1;SAF=0;SAP=5320.95;SAR=2449;SRF=0;SRP=21046.7;SRR=9691;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:140:140,0:140:4980:0:0:0,-42.1442,-448.349	0/0:109:109,0:109:3900:0:0:0,-32.8123,-351.194	0/1:319:201,118:201:7181:118:4236:-285.39,0,-550.317	0/0:230:230,0:230:8224:0:0:0,-69.2369,-740.144	0/1:57:27,30:27:964:30:1065:-79.001,0,-69.9181	0/1:69:45,24:45:1589:24:864:-57.3115,0,-122.527	0/0:91:91,0:91:3243:0:0:0,-27.3937,-292.092	0/0:212:212,0:212:7584:0:0:0,-63.8184,-682.6	0/0:210:210,0:210:7510:0:0:0,-63.2163,-675.942	0/0:147:147,0:147:5264:0:0:0,-44.2514,-473.895	0/0:65:65,0:65:2311:0:0:0,-19.5669,-208.25	0/0:135:135,0:135:4819:0:0:0,-40.639,-433.858	0/0:136:136,0:136:4863:0:0:0,-40.9401,-437.823	0/0:82:82,0:82:2928:0:0:0,-24.6845,-263.755	0/0:121:121,0:121:4313:0:0:0,-36.4246,-388.346	0/0:98:98,0:98:3503:0:0:0,-29.5009,-315.48	0/0:57:57,0:57:2031:0:0:0,-17.1587,-183.062	0/0:50:50,0:50:1769:0:0:0,-15.0515,-159.491	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/0:200:200,0:200:7139:0:0:0,-60.206,-642.57	0/0:196:196,0:196:6985:0:0:0,-59.0019,-628.71	0/1:217:87,130:87:3096:130:4641:-352.508,0,-213.546	0/0:190:190,0:190:6787:0:0:0,-57.1957,-610.904	0/1:93:45,48:45:1608:48:1712:-126.37,0,-117.014	0/0:173:173,0:173:6160:0:0:0,-52.0782,-554.5	0/1:347:186,161:186:6659:161:5681:-406.945,0,-494.93	0/1:327:164,163:164:5822:163:5805:-424.128,0,-425.658	0/0:42:42,0:42:1492:0:0:0,-12.6433,-134.575	0/0:294:293,1:293:10452:1:36:0,-84.9045,-937.003	0/0:155:155,0:155:5533:0:0:0,-46.6596,-498.091	0/1:142:91,51:91:3248:51:1824:-121.695,0,-249.796	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/0:16:16,0:16:564:0:0:0,-4.81648,-51.0903	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:249:249,0:249:8913:0:0:0,-74.9565,-802.15	0/1:139:69,70:69:2472:70:2490:-182.422,0,-180.891	0/1:75:35,40:35:1260:40:1440:-107.32,0,-91.1282	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:132:62,70:62:2192:70:2508:-186.236,0,-157.538	0/1:41:22,19:22:792:19:684:-49.5481,0,-59.2634	0/1:258:109,149:109:3898:149:5329:-402.077,0,-273.347	0/1:69:30,39:30:1076:39:1388:-104.374,0,-76.3818	0/0:63:62,1:62:2224:1:36:0,-15.3666,-196.826	0/1:209:114,95:114:4088:95:3360:-239.701,0,-305.19	0/1:213:92,121:92:3296:121:4321:-324.945,0,-232.74	0/1:214:114,100:114:4075:100:3538:-254.208,0,-302.51	0/0:136:136,0:136:4872:0:0:0,-40.9401,-438.633	0/0:179:179,0:179:6380:0:0:0,-53.8844,-574.291	0/0:125:125,0:125:4456:0:0:0,-37.6287,-401.21	0/1:14:3,11:3:104:11:392:-31.4056,0,-5.48839	0/1:172:61,111:61:2192:111:3970:-305.714,0,-145.768	0/1:135:63,72:63:2260:72:2592:-192.889,0,-163.024	0/1:10:2,8:2:72:8:284:-22.8931,0,-3.82642	0/1:229:124,105:124:4393:105:3721:-266.154,0,-326.61	0/1:54:32,22:32:1144:22:792:-55.3501,0,-87.0139	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:17:8,9:8:288:9:324:-24.3883,0,-21.1499	0/0:145:145,0:145:5175:0:0:0,-43.6493,-465.891	0/0:122:120,2:120:4270:2:72:0,-29.8889,-377.643	0/0:12:12,0:12:424:0:0:0,-3.61236,-38.4964	0/1:184:86,98:86:3056:98:3524:-261.971,0,-219.881	0/0:273:271,2:271:9634:2:57:0,-76.7679,-861.606	0/0:90:90,0:90:3204:0:0:0,-27.0927,-288.585	0/0:119:118,0:118:4187:0:0:0,-35.5215,-376.655	0/0:214:211,3:211:7563:3:108:0,-54.3452,-670.63	0/1:223:65,158:65:2307:158:5591:-436.097,0,-140.761	0/0:60:59,1:59:2100:1:36:0,-14.4635,-185.671	0/0:130:130,0:130:4660:0:0:0,-39.1339,-419.561	0/0:81:81,0:81:2896:0:0:0,-24.3834,-260.876	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/0:175:174,1:174:6213:1:36:0,-49.082,-555.668	0/1:158:76,82:76:2724:82:2943:-217.512,0,-197.84	0/0:269:266,3:266:9500:3:93:0,-72.3003,-846.285	0/0:223:222,1:222:7940:1:36:0,-63.5314,-711.027	0/0:156:156,0:156:5578:0:0:0,-46.9607,-502.143	0/0:136:132,4:132:4708:4:140:0,-27.9955,-410.937	0/1:15:4,11:4:144:11:396:-31.4673,0,-8.79817	0/0:144:143,1:143:5103:1:36:0,-39.75,-455.816	0/1:167:92,75:92:3288:75:2684:-191.533,0,-245.868	0/0:272:272,0:272:9711:0:0:0,-81.8802,-873.942	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/0:103:103,0:103:3696:0:0:0,-31.0061,-332.842	0/1:60:33,27:33:1188:27:964:-69.015,0,-89.1668	0/0:140:139,1:139:4980:1:36:0,-38.5459,-444.75	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/1:84:46,38:46:1652:38:1364:-97.7742,0,-123.682	0/0:86:86,0:86:3063:0:0:0,-25.8886,-275.899	0/1:70:33,37:33:1180:37:1328:-98.7501,0,-85.4359	0/1:182:106,76:106:3790:76:2732:-191.27,0,-286.505	0/1:80:31,49:31:1090:49:1764:-134.961,0,-74.3255	0/0:125:125,0:125:4480:0:0:0,-37.6287,-403.369	0/0:160:160,0:160:5727:0:0:0,-48.1648,-515.488
chr08	8279130	.	C	A	573926	PASS	AB=0.483042;ABP=26.1361;AC=152;AF=0.808511;AN=188;AO=20959;CIGAR=1X;DP=25810;DPB=25810;DPRA=0;EPP=45514.9;EPPR=10499.9;GTI=0;LEN=1;MEANALT=1.15957;MQM=59.8112;MQMR=59.8904;NS=94;NUMALT=1;ODDS=1.40204;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=741282;QR=170675;RO=4834;RPL=10455;RPP=3.25906;RPPR=13.3888;RPR=10504;RUN=1;SAF=10455;SAP=3.25906;SAR=10504;SRF=2341;SRP=13.3888;SRR=2493;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:225:1,224:1:36:224:7912:-708.506,-64.1335,0	1/1:200:0,200:0:0:200:7050:-634.462,-60.206,0	0/1:411:197,214:197:6959:214:7528:-553.83,0,-502.646	1/1:648:0,647:0:0:647:22945:-2063.95,-194.766,0	0/1:205:106,99:106:3762:99:3490:-252.599,0,-277.069	0/1:143:71,72:71:2523:72:2540:-185.798,0,-184.275	1/1:193:0,193:0:0:193:6837:-615.388,-58.0988,0	1/1:400:0,400:0:0:400:14101:-1268.83,-120.412,0	1/1:482:2,480:2:72:480:17023:-1524.63,-138.26,0	1/1:313:0,313:0:0:313:11150:-1003.35,-94.2224,0	1/1:246:0,246:0:0:246:8696:-782.523,-74.0534,0	1/1:469:0,468:0:0:468:16611:-1494.3,-140.882,0	1/1:319:0,319:0:0:319:11280:-1015.06,-96.0286,0	1/1:290:0,290:0:0:290:10279:-925.034,-87.2987,0	1/1:304:0,304:0:0:304:10795:-971.348,-91.5131,0	1/1:237:0,237:0:0:237:8352:-751.674,-71.3441,0	1/1:197:1,196:1:27:196:6927:-620.712,-56.6031,0	1/1:181:1,180:1:36:180:6407:-573.106,-50.8882,0	1/1:128:0,128:0:0:128:4491:-404.291,-38.5318,0	1/1:356:0,355:0:0:355:12540:-1127.9,-106.866,0	1/1:378:0,378:0:0:378:13411:-1206.76,-113.789,0	0/1:204:120,84:120:4260:84:2984:-207.378,0,-322.17	1/1:311:0,311:0:0:311:10910:-981.78,-93.6203,0	0/1:202:86,116:86:3046:116:4103:-308.647,0,-213.563	1/1:182:0,182:0:0:182:6403:-576.358,-54.7875,0	0/1:638:322,316:322:11306:316:11173:-813.132,0,-825.298	0/1:494:245,249:245:8658:249:8782:-641.655,0,-629.399	1/1:144:1,143:1:36:143:5068:-452.642,-39.75,0	1/1:595:0,595:0:0:595:21097:-1897.42,-179.113,0	1/1:338:15,322:15:532:322:11422:-979.485,-53.5935,0	0/1:329:193,136:193:6792:136:4807:-333.734,0,-512.163	0/1:12:5,7:5:180:7:248:-19.0518,0,-12.9397	1/1:26:0,26:0:0:26:923:-83.3868,-7.82678,0	0/1:19:11,8:11:396:8:280:-19.8197,0,-30.2632	1/1:18:0,18:0:0:18:626:-56.6624,-5.41854,0	1/1:20:0,20:0:0:20:702:-63.4317,-6.0206,0	1/1:707:1,704:1:36:704:24911:-2237.6,-208.969,0	0/1:242:110,132:110:3900:132:4656:-346.322,0,-278.256	0/1:188:89,99:89:3159:99:3479:-256.725,0,-227.942	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/1:359:187,172:187:6615:172:6037:-435.367,0,-486.587	0/1:128:68,59:68:2393:59:2066:-147.451,0,-177.036	0/1:437:245,192:245:8645:192:6799:-480.368,0,-646.354	0/1:245:130,114:130:4548:114:4043:-290.24,0,-335.679	1/1:262:0,262:0:0:262:9110:-819.555,-78.8699,0	0/1:294:154,140:154:5377:140:5012:-362.638,0,-395.189	0/1:324:171,153:171:6068:153:5355:-384.48,0,-448.68	0/1:379:191,188:191:6776:188:6654:-484.733,0,-495.8	1/1:196:1,195:1:36:195:6965:-623.299,-55.4036,0	1/1:455:1,454:1:36:454:15946:-1431.19,-133.37,0	1/1:196:2,193:2:72:193:6833:-608.066,-52.2249,0	0/1:26:10,16:10:348:16:564:-43.2635,0,-23.8284	0/1:273:139,134:139:4858:134:4760:-346.376,0,-355.196	0/1:250:117,133:117:4149:133:4671:-345.296,0,-298.335	0/1:29:13,16:13:464:16:576:-43.4451,0,-33.3676	0/1:430:215,215:215:7594:215:7589:-553.576,0,-553.944	0/1:113:55,57:55:1926:57:2030:-148.896,0,-139.541	1/1:11:0,11:0:0:11:381:-34.6206,-3.31133,0	0/1:12:6,6:6:216:6:216:-16.1782,0,-16.1782	1/1:277:0,277:0:0:277:9813:-883.077,-83.3853,0	1/1:376:3,373:3:104:373:13273:-1184.66,-103.484,0	1/1:14:0,14:0:0:14:482:-43.7051,-4.21442,0	0/1:439:223,216:223:7918:216:7679:-558.886,0,-580.45	1/1:479:2,476:2:72:476:16858:-1509.98,-137.415,0	1/1:201:0,201:0:0:201:7075:-636.724,-60.507,0	1/1:235:0,235:0:0:235:8326:-749.252,-70.7421,0	1/1:487:6,481:6:208:481:16963:-1507.24,-127.543,0	0/1:464:298,166:298:10615:166:5894:-390.801,0,-815.571	1/1:166:1,165:1:36:165:5844:-522.473,-46.3727,0	1/1:161:0,161:0:0:161:5657:-509.243,-48.4658,0	1/1:160:0,160:0:0:160:5640:-507.174,-48.1648,0	1/1:43:0,43:0:0:43:1500:-135.288,-12.9443,0	1/1:328:0,328:0:0:328:11510:-1035.41,-98.7378,0	0/1:229:127,102:127:4470:102:3608:-255.989,0,-333.54	1/1:426:0,426:0:0:426:14966:-1346.52,-128.239,0	1/1:428:1,426:1:36:426:15146:-1359.25,-125.301,0	1/1:468:1,467:1:36:467:16486:-1479.65,-137.284,0	1/1:305:4,301:4:140:301:10635:-944.118,-78.8696,0	0/1:32:4,28:4:144:28:994:-80.1414,0,-3.68066	1/1:298:1,297:1:36:297:10504:-941.66,-86.1087,0	0/1:348:158,190:158:5606:190:6738:-501.704,0,-399.827	1/1:442:1,439:1:36:439:15640:-1403.41,-129.215,0	1/1:220:0,220:0:0:220:7785:-700.675,-66.2266,0	1/1:339:2,337:2:72:337:12035:-1076.06,-95.2124,0	0/1:209:103,106:103:3656:106:3753:-275.056,0,-266.329	1/1:515:3,512:3:108:512:18128:-1621,-144.955,0	1/1:69:0,69:0:0:69:2409:-217.059,-20.7711,0	0/1:284:149,135:149:5214:135:4780:-344.861,0,-383.914	1/1:334:0,334:0:0:334:11782:-1060.25,-100.544,0	0/1:198:83,115:83:2948:115:4064:-306.344,0,-205.952	0/1:361:176,184:176:6148:184:6521:-478.226,0,-444.7	0/1:308:205,103:205:7199:103:3646:-235.576,0,-555.169	1/1:311:0,310:0:0:310:10982:-987.914,-93.3193,0	1/1:437:1,435:1:36:435:15408:-1382.66,-128.011,0
chr08	8279144	.	TATTGA	CATTGA,CATTTGA	346346	PASS	AB=0.77452,0.21987;ABP=3620.23,3769.57;AC=155,33;AF=0.824468,0.175532;AN=188;AO=13263,1234;CIGAR=1X5M,1X1M1I4M;DP=14580;DPB=16567.3;DPRA=0,1.19084;EPP=28803.2,2682.61;EPPR=11.6962;GTI=9;LEN=1,7;MEANALT=2.2234,2.73333;MQM=59.895,59.4425;MQMR=60;NS=94;NUMALT=2;ODDS=1.76922;PAIRED=0,0;PAIREDR=0;PAO=5342.83,5342.83;PQA=186449,186449;PQR=4.66667;PRO=0.333333;QA=471290,43015;QR=140;RO=4;RPL=1338,0;RPP=18354,2682.61;RPPR=5.18177;RPR=11925,1234;RUN=1,1;SAF=1338,0;SAP=18354,2682.61;SAR=11925,1234;SRF=1;SRP=5.18177;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:104:0,102,0:0:0:102,0:3638,0:-323.875,-30.7051,0,-323.875,-30.7051,-323.875	1/1:104:0,104,0:0:0:104,0:3705,0:-328.109,-31.3071,0,-328.109,-31.3071,-328.109	1/2:268:0,194,70:0:0:194,70:6924,2433:-759.996,-195.608,-137.208,-562.229,0,-541.157	1/1:366:0,363,0:0:0:363,0:12915,0:-1156.3,-109.274,0,-1156.3,-109.274,-1156.3	1/2:106:0,78,28:0:0:78,28:2770,991:-300.819,-75.2748,-51.7945,-220.126,0,-211.697	1/2:75:0,45,30:0:0:45,30:1589,1049:-210.915,-81.614,-68.0676,-125.621,0,-116.59	1/1:116:0,116,0:0:0:116,0:4152,0:-369.697,-34.9195,0,-369.697,-34.9195,-369.697	1/1:151:0,151,0:0:0:151,0:5372,0:-469.331,-45.4555,0,-469.331,-45.4555,-469.331	1/1:155:0,155,0:0:0:155,0:5463,0:-472.107,-46.6597,0,-472.107,-46.6597,-472.107	1/1:120:0,120,0:0:0:120,0:4256,0:-371.392,-36.1236,0,-371.392,-36.1236,-371.392	1/1:106:0,106,0:0:0:106,0:3742,0:-328.543,-31.9092,0,-328.543,-31.9092,-328.543	1/1:212:0,210,0:0:0:210,0:7482,0:-665.851,-63.2163,0,-665.851,-63.2163,-665.851	1/1:157:0,156,0:0:0:156,0:5561,0:-490.646,-46.9607,0,-490.646,-46.9607,-490.646	1/1:123:0,121,0:0:0:121,0:4310,0:-382.926,-36.4246,0,-382.926,-36.4246,-382.926	1/1:152:0,152,0:0:0:152,0:5417,0:-478.476,-45.7566,0,-478.476,-45.7566,-478.476	1/1:110:0,110,0:0:0:110,0:3894,0:-343.32,-33.1133,0,-343.32,-33.1133,-343.32	1/1:108:0,108,0:0:0:108,0:3851,0:-341.657,-32.5112,0,-341.657,-32.5112,-341.657	1/1:96:0,96,0:0:0:96,0:3416,0:-302.358,-28.8989,0,-302.358,-28.8989,-302.358	1/1:61:0,61,0:0:0:61,0:2151,0:-189.906,-18.3628,0,-189.906,-18.3628,-189.906	1/1:217:0,215,0:0:0:215,0:7664,0:-685.208,-64.7215,0,-685.208,-64.7215,-685.208	1/1:124:0,124,0:0:0:124,0:4405,0:-381.167,-37.3277,0,-381.167,-37.3277,-381.167	1/2:187:0,151,34:0:0:151,34:5382,1206:-536.942,-98.2418,-52.7862,-438.686,0,-428.451	1/1:190:0,190,0:0:0:190,0:6774,0:-602.41,-57.1957,0,-602.41,-57.1957,-602.41	1/2:110:0,88,22:0:0:88,22:3149,788:-315.882,-59.2998,-32.8092,-251.63,0,-245.008	1/1:113:0,113,0:0:0:113,0:3980,0:-354.276,-34.0164,0,-354.276,-34.0164,-354.276	1/2:541:0,476,61:0:0:476,61:16884,2082:-1544.03,-168.819,-25.5283,-1375.13,0,-1356.77	1/2:292:0,227,63:0:0:227,63:8048,2220:-829.981,-174.614,-106.281,-649.348,0,-630.383	1/1:62:0,61,0:0:0:61,0:2171,0:-190.387,-18.3628,0,-190.387,-18.3628,-190.387	1/1:583:0,580,0:0:0:580,0:20677,0:-1860.04,-174.597,0,-1860.04,-174.597,-1860.04	1/1:147:0,140,6:0:0:140,6:4992,196:-447.546,-42.1442,0,-431.723,-36.0383,-429.916	1/2:147:0,95,50:0:0:95,50:3353,1757:-412.05,-139.119,-110.521,-269.226,0,-254.174	1/1:5:0,5,0:0:0:5,0:176,0:-15.8534,-1.50515,0,-15.8534,-1.50515,-15.8534	1/1:26:0,26,0:0:0:26,0:917,0:-82.7867,-7.82678,0,-82.7867,-7.82678,-82.7867	1/2:15:0,11,4:0:0:11,4:387,142:-43.201,-11.7445,-8.4332,-31.6358,0,-30.4316	1/1:9:0,9,0:0:0:9,0:311,0:-27.7888,-2.70927,0,-27.7888,-2.70927,-27.7888	1/1:14:0,14,0:0:0:14,0:495,0:-44.5477,-4.21442,0,-44.5477,-4.21442,-44.5477	1/1:694:1,690,0:1:32:690,0:24338,0:-2186.23,-205.178,0,-2186.53,-207.711,-2189.11	1/2:136:0,108,27:0:0:108,27:3828,942:-382.351,-70.6717,-38.1604,-305.837,0,-297.709	1/2:98:0,81,17:0:0:81,17:2887,590:-278.227,-43.1584,-18.7749,-230.281,0,-225.164	1/1:5:0,5,0:0:0:5,0:180,0:-16.5039,-1.50515,0,-16.5039,-1.50515,-16.5039	1/2:236:1,170,65:1:36:170,65:6064,2266:-667.376,-173.428,-125.188,-483.683,0,-467.053	1/2:80:0,61,19:0:0:61,19:2184,676:-231.062,-53.0607,-34.6979,-175.979,0,-170.26	1/2:229:0,182,45:0:0:182,45:6480,1576:-650.066,-122.195,-67.4073,-521.849,0,-508.303	1/2:123:0,93,30:0:0:93,30:3293,1068:-349.732,-81.6429,-53.6471,-262.709,0,-253.678	1/1:124:0,122,0:0:0:122,0:4309,0:-383.446,-36.7257,0,-383.446,-36.7257,-383.446	1/2:252:0,209,42:0:0:209,42:7393,1446:-719.144,-117.012,-54.0963,-601.775,0,-589.132	1/2:185:0,137,47:0:0:137,47:4862,1658:-522.607,-126.599,-85.3578,-387.629,0,-373.481	1/2:205:1,153,51:1:36:153,51:5483,1775:-581.304,-134.529,-91.4066,-437.305,0,-424.89	1/1:130:0,130,0:0:0:130,0:4616,0:-411.492,-39.1339,0,-411.492,-39.1339,-411.492	1/1:331:0,330,0:0:0:330,0:11736,0:-1047.46,-99.3399,0,-1047.46,-99.3399,-1047.46	1/1:185:0,183,1:0:0:183,1:6461,36:-581.153,-55.0885,0,-578.217,-52.1974,-577.916	1/2:17:0,12,5:0:0:12,5:428,180:-49.8212,-14.9506,-11.3383,-35.1361,0,-33.631	1/2:139:0,91,48:0:0:91,48:3248,1682:-394.483,-129.794,-102.4,-257.656,0,-243.206	1/2:210:0,181,28:0:0:181,28:6466,978:-606.422,-79.2439,-24.7574,-526.879,0,-518.45	1/2:15:0,9,6:0:0:9,6:324,211:-43.1824,-16.8249,-14.1157,-26.0476,0,-24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chr08	8299634	.	A	T	100400	PASS	AB=0.597163;ABP=407.683;AC=102;AF=0.542553;AN=188;AO=4163;CIGAR=1X;DP=6394;DPB=6394;DPRA=2.68803;EPP=314.689;EPPR=3.05799;GTI=11;LEN=1;MEANALT=1;MQM=59.9649;MQMR=58.121;NS=94;NUMALT=1;ODDS=1.02531;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=146528;QR=79805;RO=2231;RPL=0;RPP=9042.85;RPPR=4847.57;RPR=4163;RUN=1;SAF=2468;SAP=314.689;SAR=1695;SRF=1112;SRP=3.05799;SRR=1119;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:25:11,14:11:396:14:504:-38.1723,0,-28.4561	0/1:32:5,27:5:180:27:968:-77.8044,0,-6.9191	0/1:28:13,15:13:464:15:540:-40.5077,0,-33.6687	0/1:114:26,88:26:936:88:3076:-242.754,0,-50.2236	0/1:40:31,9:31:1116:9:320:-17.1012,0,-88.637	0/1:17:13,4:13:468:4:144:-8.19611,0,-37.3421	0/1:25:4,21:4:144:21:715:-57.1049,0,-5.77006	0/1:57:10,47:10:360:47:1684:-134.688,0,-15.5856	0/1:23:3,20:3:108:20:720:-58.2051,0,-3.15148	0/1:57:12,45:12:432:45:1564:-123.889,0,-22.0579	0/1:81:9,72:9:324:72:2450:-196.369,0,-5.11313	1/1:66:6,60:6:216:60:2112:-170.558,-0.0774679,0	1/1:62:3,59:3:108:59:2115:-180.543,-8.58869,0	0/1:101:11,90:11:396:90:3199:-257.73,0,-5.57408	0/1:141:14,127:14:485:127:4425:-355.985,0,-1.23079	0/1:90:14,76:14:504:76:2663:-212.826,0,-18.5877	1/1:62:5,57:5:180:57:2032:-166.6,-2.1118,0	0/1:60:11,49:11:396:49:1760:-140.622,0,-17.9127	0/1:39:11,28:11:396:28:1004:-78.9357,0,-24.2344	0/1:80:13,67:13:464:67:2341:-186.867,0,-17.2483	0/1:90:20,70:20:712:70:2476:-196.002,0,-36.9173	0/1:62:55,7:55:1972:7:248:-4.00033,0,-158.423	0/1:34:10,24:10:360:24:834:-65.1406,0,-22.3129	0/1:69:39,30:39:1396:30:1080:-76.7422,0,-105.157	0/1:36:4,32:4:144:32:1120:-90.2706,0,-2.44176	0/1:104:49,55:49:1747:55:1920:-141.764,0,-126.071	0/1:130:76,54:76:2716:54:1912:-133.224,0,-205.156	0/1:69:9,60:9:324:60:2144:-172.457,0,-8.7183	1/1:76:5,71:5:180:71:2489:-207.716,-6.33094,0	0/1:45:7,38:7:252:38:1336:-106.994,0,-9.47434	0/1:49:31,18:31:1112:18:623:-41.6426,0,-85.6409	0/0:39:39,0:39:1400:0:0:0,-11.7402,-125.277	0/1:88:77,11:77:2768:11:388:-8.76672,0,-221.182	0/0:38:38,0:38:1341:0:0:0,-11.4391,-120.985	0/1:28:20,8:20:716:8:284:-17.4745,0,-56.3288	0/1:31:20,11:20:712:11:396:-26.6508,0,-54.7976	1/1:290:9,281:9:320:281:9873:-859.377,-58.161,0	0/1:50:39,11:39:1388:11:388:-20.2059,0,-109.667	0/1:67:37,30:37:1328:30:1067:-76.1722,0,-99.6532	0/1:94:83,11:83:2961:11:392:-7.32324,0,-233.175	0/1:80:46,34:46:1644:34:1208:-84.933,0,-123.849	0/1:52:27,25:27:972:25:884:-64.2248,0,-72.128	0/1:105:70,35:70:2504:35:1248:-81.0167,0,-192.995	0/1:140:82,58:82:2940:58:2034:-141.187,0,-222.674	1/1:107:8,99:8:288:99:3496:-288.589,-5.94746,0	0/1:59:22,37:22:792:37:1287:-98.3692,0,-53.8449	0/1:37:20,17:20:712:17:612:-44.2753,0,-53.2604	0/1:81:52,29:52:1853:29:983:-64.3911,0,-142.419	1/1:52:4,48:4:144:48:1700:-139.99,-2.35775,0	0/1:82:17,65:17:612:65:2298:-182.205,0,-30.7197	0/1:36:5,31:5:176:31:1053:-84.2368,0,-5.34322	0/0:74:71,3:71:2525:3:108:0,-12.201,-216.282	0/1:27:15,12:15:540:12:432:-31.0934,0,-40.8087	0/1:22:11,11:11:392:11:375:-27.4552,0,-28.9974	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:110:76,34:76:2712:34:1188:-74.1116,0,-209.393	0/1:35:22,13:22:775:13:464:-31.5615,0,-59.2581	0/1:46:40,6:40:1420:6:216:-5.94313,0,-111.668	0/1:27:14,13:14:496:13:452:-32.8833,0,-35.0381	0/1:30:6,24:6:216:24:856:-68.3302,0,-10.7347	1/1:124:8,116:8:288:116:4095:-342.667,-11.2572,0	0/1:26:22,4:22:788:4:144:-5.48684,0,-63.3707	0/1:55:22,33:22:788:33:1148:-87.0675,0,-54.6881	0/1:65:7,58:7:252:58:2034:-163.765,0,-3.43974	0/1:45:12,33:12:428:33:1158:-90.9799,0,-25.1236	0/1:40:20,20:20:712:20:690:-50.3781,0,-52.3306	0/1:70:13,57:13:464:57:2019:-160.91,0,-21.0079	0/1:73:60,13:60:2140:13:451:-18.9446,0,-170.811	0/1:59:26,33:26:924:33:1172:-88.0267,0,-65.3532	0/1:22:3,19:3:108:19:676:-54.5453,0,-3.45251	0/1:128:27,101:27:968:101:3564:-282.437,0,-48.8469	0/1:31:14,17:14:504:17:596:-44.6335,0,-35.4349	0/1:16:2,14:2:72:14:496:-40.1572,0,-2.02024	0/1:32:21,11:21:756:11:396:-26.3498,0,-58.7343	1/1:87:7,80:7:252:80:2800:-229.213,-3.16065,0	0/1:77:11,66:11:388:66:2309:-184.892,0,-12.0781	0/1:19:10,9:10:352:9:309:-22.4211,0,-25.3526	1/1:26:1,25:1:36:25:892:-77.0014,-4.22851,0	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:82:33,49:33:1188:49:1735:-131.75,0,-82.4624	0/1:50:29,21:29:1044:21:748:-52.5938,0,-79.2233	0/1:113:14,99:14:496:99:3467:-278.229,0,-10.9532	0/1:120:15,105:15:540:105:3711:-298.069,0,-12.8037	1/1:108:8,100:8:288:100:3475:-286.697,-6.25911,0	0/1:129:65,64:65:2331:64:2257:-164.559,0,-171.207	0/1:235:30,205:30:1059:205:7180:-575.097,0,-24.5935	0/1:25:6,19:6:216:19:684:-54.3646,0,-12.2648	0/1:67:41,26:41:1476:26:910:-62.0451,0,-112.967	0/1:69:7,62:7:252:62:2223:-179.563,0,-2.24962	0/1:67:43,24:43:1544:24:864:-57.9136,0,-119.042	0/1:112:64,48:64:2292:48:1688:-118.491,0,-172.467	0/1:83:59,24:59:2108:24:833:-50.2992,0,-164.996	1/1:47:1,46:1:36:46:1591:-139.878,-10.5501,0	1/1:174:3,171:3:108:171:6013:-531.206,-42.3041,0
chr08	8299671	.	T	G	117949	PASS	AB=0.589335;ABP=403.403;AC=102;AF=0.542553;AN=188;AO=4882;CIGAR=1X;DP=8010;DPB=8010;DPRA=2.19768;EPP=9.63058;EPPR=585.86;GTI=6;LEN=1;MEANALT=1.02151;MQM=59.9697;MQMR=56.9207;NS=94;NUMALT=1;ODDS=1.36034;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171833;QR=111684;RO=3126;RPL=4863;RPP=10439.7;RPPR=6695.82;RPR=19;RUN=1;SAF=2361;SAP=14.397;SAR=2521;SRF=1094;SRP=614.193;SRR=2032;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:52:23,29:23:820:29:1028:-77.1789,0,-58.2134	0/1:57:10,47:10:356:47:1621:-129.012,0,-14.7374	0/1:90:51,39:51:1815:39:1374:-96.8644,0,-135.592	0/1:117:25,92:25:900:92:3222:-254.982,0,-46.0821	0/1:38:31,7:31:1116:7:252:-11.5898,0,-89.239	0/1:32:23,9:23:824:9:324:-19.8729,0,-64.8219	0/1:26:4,22:4:140:22:780:-62.6604,0,-5.09999	0/1:103:24,78:24:864:78:2763:-217.886,0,-46.0744	0/1:54:14,40:14:500:40:1424:-112.202,0,-28.9527	0/1:59:13,46:13:459:46:1631:-129.316,0,-23.8787	0/1:83:10,73:10:360:73:2590:-208.364,0,-7.69297	0/1:146:24,122:24:842:122:4258:-339.455,0,-30.7358	1/1:127:12,115:12:428:115:4048:-326.353,-0.0746389,0	0/1:99:11,88:11:396:88:3085:-248.078,0,-6.17614	0/1:138:14,124:14:496:124:4336:-348.876,0,-3.13116	0/1:94:14,80:14:489:80:2781:-222.235,0,-16.0244	1/1:99:8,91:8:288:91:3175:-259.708,-3.53456,0	0/1:87:14,73:14:496:73:2586:-206.799,0,-18.7411	0/1:84:28,56:28:995:56:1965:-151.836,0,-63.9217	0/1:88:13,75:13:468:75:2639:-211.265,0,-15.1995	0/1:98:20,78:20:720:78:2766:-219.678,0,-35.2263	0/1:65:57,8:57:2029:8:288:-6.70046,0,-162.329	0/1:37:9,28:9:324:28:987:-78.0049,0,-18.1758	0/1:69:38,31:38:1368:31:1103:-78.8087,0,-102.633	0/1:40:4,36:4:144:36:1247:-100.486,0,-1.23764	0/1:108:50,58:50:1800:58:2047:-151.987,0,-129.636	0/1:134:75,59:75:2687:59:2068:-146.051,0,-201.351	0/1:74:9,65:9:320:65:2307:-185.615,0,-6.84965	1/1:77:5,72:5:180:72:2553:-213.474,-6.63197,0	0/1:49:7,42:7:252:42:1470:-117.841,0,-8.27022	0/1:50:31,19:31:1108:19:667:-45.3031,0,-84.9795	0/0:39:39,0:39:1400:0:0:0,-11.7402,-125.272	0/1:88:77,11:77:2760:11:392:-9.12942,0,-220.454	0/0:173:171,2:171:6080:2:72:0,-45.2415,-536.38	0/0:111:101,10:101:3628:10:360:0,-0.670027,-292.64	0/0:270:247,23:247:8861:23:816:0,-7.51638,-710.754	1/1:297:9,288:9:324:288:10131:-882.233,-59.9047,0	0/1:51:40,11:40:1432:11:392:-20.2675,0,-112.737	0/1:121:79,42:79:2828:42:1459:-95.1763,0,-218.052	0/1:93:82,11:82:2915:11:385:-6.9884,0,-229.801	0/1:88:47,41:47:1692:41:1432:-102.682,0,-125.759	0/1:51:27,24:27:968:24:836:-60.2022,0,-72.0685	0/1:111:73,38:73:2607:38:1321:-85.7718,0,-200.409	0/1:141:83,58:83:2939:58:2064:-143.586,0,-221.649	1/1:105:7,98:7:248:98:3437:-286.885,-8.94862,0	0/1:60:23,37:23:828:37:1319:-100.949,0,-56.7823	0/1:72:45,27:45:1608:27:964:-65.4027,0,-123.25	0/1:84:50,34:50:1788:34:1194:-82.4769,0,-135.63	1/1:51:4,47:4:140:47:1675:-138.111,-2.42576,0	0/1:86:17,69:17:608:69:2401:-190.185,0,-29.1542	0/1:41:6,35:6:208:35:1224:-98.1187,0,-6.65425	0/0:75:70,5:70:2496:5:176:0,-6.39223,-207.806	0/1:74:43,31:43:1548:31:1103:-77.3036,0,-115.853	0/1:23:11,12:11:396:12:432:-32.2975,0,-29.0591	0/0:37:36,1:36:1288:1:36:0,-7.53983,-111.175	0/1:112:78,34:78:2782:34:1212:-75.671,0,-214.894	0/1:36:23,13:23:816:13:456:-30.5362,0,-62.6477	0/1:44:39,5:39:1372:5:172:-2.57265,0,-107.948	0/1:27:14,13:14:496:13:464:-33.9697,0,-35.0381	0/1:32:6,26:6:216:26:932:-74.5659,0,-10.1327	1/1:120:8,112:8:288:112:3986:-332.861,-10.0531,0	0/1:26:22,4:22:773:4:144:-5.48684,0,-62.0105	0/1:59:22,37:22:788:37:1309:-100.349,0,-53.4556	0/1:68:7,61:7:252:61:2167:-174.826,0,-2.53665	0/1:45:12,33:12:423:33:1180:-92.9617,0,-24.5096	0/1:39:19,20:19:684:20:675:-49.324,0,-50.1153	0/1:74:14,60:14:500:60:2106:-167.533,0,-22.7231	0/1:76:61,15:61:2156:15:536:-25.6965,0,-171.401	0/1:62:27,35:27:950:35:1216:-91.0766,0,-66.7526	0/1:50:14,36:14:500:36:1245:-97.2992,0,-30.2313	0/1:132:27,105:27:963:105:3680:-291.668,0,-47.1185	0/1:29:14,15:14:504:15:536:-39.8449,0,-36.037	1/1:55:5,50:5:180:50:1788:-144.704,-0.0584277,0	0/1:62:40,22:40:1432:22:788:-52.5809,0,-110.443	1/1:100:7,93:7:252:93:3264:-270.952,-7.07404,0	0/1:80:12,68:12:428:68:2391:-191.363,0,-14.7764	0/1:51:18,33:18:648:33:1180:-91.1555,0,-42.3514	1/1:47:4,43:4:144:43:1523:-124.067,-0.852838,0	0/1:79:70,9:70:2488:9:324:-5.72449,0,-197.757	0/1:81:30,51:30:1072:51:1806:-138.437,0,-72.3273	0/1:113:82,31:82:2944:31:1100:-65.2939,0,-229.22	0/1:118:15,102:15:536:102:3604:-288.988,0,-12.99	0/1:120:16,104:16:576:104:3653:-292.85,0,-16.0421	1/1:111:8,103:8:279:103:3625:-301.021,-7.98208,0	0/1:132:65,67:65:2336:67:2354:-172.383,0,-170.754	0/1:236:29,207:29:1036:207:7250:-581.468,0,-22.0625	0/1:52:11,41:11:392:41:1429:-113.249,0,-19.8956	0/1:113:62,51:62:2207:51:1751:-123.853,0,-164.843	1/1:122:11,111:11:392:111:3933:-318.609,-1.16968,0	0/1:68:44,24:44:1584:24:856:-56.8911,0,-122.339	0/1:120:67,53:67:2404:53:1842:-129.934,0,-180.087	0/1:85:61,24:61:2173:24:815:-48.0726,0,-170.239	1/1:44:1,43:1:36:43:1529:-134.304,-9.64705,0	1/1:174:3,171:3:108:171:6006:-530.578,-42.3041,0
chr08	8326490	.	CGC	TGT,TGC	174305	PASS	AB=0.477313,0.51917;ABP=15.7206,12.085;AC=151,37;AF=0.803191,0.196809;AN=188;AO=6628,1497;CIGAR=1X1M1X,1X2M;DP=8152;DPB=8152.33;DPRA=0,1.12773;EPP=14144.7,3201.8;EPPR=13.8677;GTI=1;LEN=3,1;MEANALT=1.7766,2.21154;MQM=53.7126,53.6693;MQMR=60;NS=94;NUMALT=2;ODDS=4.19604;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=36,0;PQR=0;PRO=0;QA=231290,53471;QR=180;RO=5;RPL=29,6;RPP=14144.7,3201.8;RPPR=13.8677;RPR=6599,1491;RUN=1,1;SAF=6628,1497;SAP=14395.5,3253.7;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:38:0,38,0:0:0:38,0:1351,0:-120.854,-11.4391,0,-120.854,-11.4391,-120.854	1/1:111:0,110,0:0:0:110,0:3807,0:-340.526,-33.1133,0,-340.526,-33.1133,-340.526	1/2:80:1,38,41:1:36:38,41:1307,1451:-219.988,-114.897,-106.395,-102.442,0,-93.0377	1/1:122:0,122,0:0:0:122,0:4266,0:-381.865,-36.7257,0,-381.865,-36.7257,-381.865	1/2:52:0,31,21:0:0:31,21:1088,756:-149.894,-61.7802,-52.4483,-88.4684,0,-82.1468	1/2:33:0,14,19:0:0:14,19:502,676:-95.2842,-54.7103,-50.4958,-40.9277,0,-35.2081	1/1:133:0,133,0:0:0:133,0:4596,0:-413.079,-40.037,0,-413.079,-40.037,-413.079	1/1:107:0,107,0:0:0:107,0:3655,0:-326.959,-32.2102,0,-326.959,-32.2102,-326.959	1/1:119:0,119,0:0:0:119,0:4112,0:-368.714,-35.8226,0,-368.714,-35.8226,-368.714	1/1:92:0,92,0:0:0:92,0:3221,0:-289.758,-27.6948,0,-289.758,-27.6948,-289.758	1/1:130:0,128,0:0:0:128,0:4432,0:-397.351,-38.5318,0,-397.351,-38.5318,-397.351	1/1:104:0,104,0:0:0:104,0:3689,0:-330.192,-31.3071,0,-330.192,-31.3071,-330.192	1/1:84:0,83,0:0:0:83,0:2904,0:-259.463,-24.9855,0,-259.463,-24.9855,-259.463	1/1:128:0,126,1:0:0:126,1:4378,36:-392.228,-37.9298,0,-389.29,-34.9319,-388.989	1/1:86:0,86,0:0:0:86,0:3057,0:-274.998,-25.8886,0,-274.998,-25.8886,-274.998	1/1:82:0,81,0:0:0:81,0:2825,0:-253.479,-24.3834,0,-253.479,-24.3834,-253.479	1/1:101:0,100,0:0:0:100,0:3531,0:-315.359,-30.103,0,-315.359,-30.103,-315.359	1/1:79:0,79,0:0:0:79,0:2747,0:-246.388,-23.7814,0,-246.388,-23.7814,-246.388	1/1:71:0,71,0:0:0:71,0:2510,0:-224.947,-21.3731,0,-224.947,-21.3731,-224.947	1/1:151:0,149,1:0:0:149,1:5174,36:-464.363,-44.8535,0,-461.425,-41.8411,-461.124	1/1:93:0,93,0:0:0:93,0:3225,0:-289.638,-27.9958,0,-289.638,-27.9958,-289.638	1/2:91:0,33,58:0:0:33,58:1170,2080:-264.944,-169.877,-159.943,-95.4224,0,-77.9627	1/1:63:0,63,0:0:0:63,0:2212,0:-199.029,-18.9649,0,-199.029,-18.9649,-199.029	1/2:129:0,60,69:0:0:60,69:2070,2458:-366.438,-199.574,-181.512,-167.212,0,-146.441	1/1:50:0,49,0:0:0:49,0:1718,0:-154.035,-14.7505,0,-154.035,-14.7505,-154.035	1/2:196:3,82,111:3:108:82,111:2843,3977:-543.533,-314.539,-298.667,-221.074,0,-196.473	1/2:144:0,77,67:0:0:77,67:2691,2391:-412.976,-194.693,-171.513,-218.635,0,-198.466	1/1:37:0,37,0:0:0:37,0:1312,0:-117.94,-11.1381,0,-117.94,-11.1381,-117.94	1/1:152:0,151,1:0:0:151,1:5244,36:-470.446,-45.4555,0,-467.51,-42.1593,-467.209	1/1:81:0,80,1:0:0:80,1:2789,36:-250.384,-24.0824,0,-247.451,-20.7903,-247.15	1/2:98:0,48,50:0:0:48,50:1656,1796:-280.931,-146.583,-132.133,-134.699,0,-119.648	1/2:14:0,9,5:0:0:9,5:315,176:-40.2521,-14.6592,-11.9499,-25.9436,0,-24.4384	1/2:30:0,26,4:0:0:26,4:913,144:-86.1769,-12.1095,-4.28272,-74.426,0,-73.2218	1/2:4:0,2,2:0:0:2,2:64,72:-11.1522,-6.02006,-5.418,-5.46607,0,-4.86401	1/1:13:0,13,0:0:0:13,0:434,0:-39.1108,-3.91339,0,-39.1108,-3.91339,-39.1108	1/1:17:0,17,0:0:0:17,0:590,0:-53.3083,-5.11751,0,-53.3083,-5.11751,-53.3083	1/1:223:0,222,0:0:0:222,0:7794,0:-700.522,-66.8287,0,-700.522,-66.8287,-700.522	1/2:133:0,62,71:0:0:62,71:2089,2540:-375.112,-206.77,-188.106,-168.688,0,-147.315	1/2:79:0,44,35:0:0:44,35:1552,1256:-226.953,-102.094,-88.8489,-125.212,0,-114.676	1/1:5:0,5,0:0:0:5,0:178,0:-16.3469,-1.50515,0,-16.3469,-1.50515,-16.3469	1/2:72:0,41,31:0:0:41,31:1423,1093:-204.531,-89.0471,-76.7049,-115.833,0,-106.501	1/2:45:0,26,19:0:0:26,19:915,684:-130.333,-55.9575,-48.1307,-74.7312,0,-69.0116	1/2:114:0,55,59:0:0:55,59:1919,2112:-326.96,-171.325,-154.768,-155.987,0,-138.226	1/2:85:0,38,47:0:0:38,47:1321,1688:-244.217,-137.603,-126.164,-106.965,0,-92.8168	1/1:81:0,81,0:0:0:81,0:2861,0:-257.335,-24.3834,0,-257.335,-24.3834,-257.335	1/2:104:0,67,37:0:0:67,37:2331,1326:-297.05,-108.399,-88.2301,-189.005,0,-177.866	1/2:64:0,32,32:0:0:32,32:1130,1143:-183.194,-92.2872,-82.6543,-91.2579,0,-81.6249	1/2:100:0,49,51:0:0:49,51:1710,1828:-287.497,-148.939,-134.189,-138.91,0,-123.557	1/1:97:0,97,0:0:0:97,0:3399,0:-305.689,-29.1999,0,-305.689,-29.1999,-305.689	1/1:82:0,82,0:0:0:82,0:2868,0:-257.613,-24.6845,0,-257.613,-24.6845,-257.613	1/1:130:0,129,1:0:0:129,1:4485,36:-403.129,-38.8329,0,-400.191,-35.5356,-399.89	1/2:6:0,2,4:0:0:2,4:70,140:-17.3679,-11.7323,-11.1302,-5.98316,0,-4.77904	1/2:90:0,44,45:0:0:44,45:1517,1616:-253.911,-131.336,-118.09,-122.643,0,-109.097	1/2:31:0,16,15:0:0:16,15:534,540:-87.5707,-44.3994,-39.5829,-43.5183,0,-39.0028	1/2:19:0,4,15:0:0:4,15:144,532:-55.297,-43.5788,-42.3747,-12.076,0,-7.56058	1/2:72:0,28,44:0:0:28,44:981,1563:-206.938,-127.382,-118.953,-79.9069,0,-66.6616	1/2:62:0,36,25:0:0:36,25:1248,885: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chr08	8335248	.	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chr08	8335257	.	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chr08	8335267	.	T	G	92595.7	PASS	AB=0.486451;ABP=16.4849;AC=36;AF=0.191489;AN=188;AO=4146;CIGAR=1X;DP=22513;DPB=22513;DPRA=1.18806;EPP=8997.25;EPPR=39871.2;GTI=0;LEN=1;MEANALT=1.04255;MQM=58.6368;MQMR=59.9739;NS=94;NUMALT=1;ODDS=15.3777;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=146867;QR=655215;RO=18360;RPL=2062;RPP=3.2638;RPPR=706;RPR=2084;RUN=1;SAF=2061;SAP=3.31198;SAR=2085;SRF=7961;SRP=706;SRR=10399;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:151:151,0:151:5372:0:0:0,-45.4555,-483.571	0/0:356:356,0:356:12724:0:0:0,-107.167,-1144.91	0/1:420:184,236:184:6584:236:8386:-627.155,0,-466.209	0/0:425:424,1:424:15107:1:36:0,-124.339,-1355.76	0/1:215:97,118:97:3480:118:4167:-310.261,0,-248.688	0/1:118:59,59:59:2104:59:2076:-151.381,0,-154.108	0/0:263:263,0:263:9403:0:0:0,-79.1709,-846.073	0/0:485:485,0:485:17351:0:0:0,-146,-1561.22	0/0:261:261,0:261:9312:0:0:0,-78.5688,-838.028	0/0:211:211,0:211:7555:0:0:0,-63.5173,-679.989	0/0:163:162,1:162:5746:1:32:0,-45.8686,-514.055	0/0:225:223,0:223:7932:0:0:0,-67.1297,-713.552	0/0:185:185,0:185:6595:0:0:0,-55.6905,-593.634	0/0:209:208,0:208:7413:0:0:0,-62.6142,-666.859	0/0:187:187,0:187:6674:0:0:0,-56.2926,-600.652	0/0:127:127,0:127:4539:0:0:0,-38.2308,-408.672	0/0:178:178,0:178:6358:0:0:0,-53.5833,-572.311	0/0:171:171,0:171:6112:0:0:0,-51.4761,-550.177	0/0:85:85,0:85:3044:0:0:0,-25.5875,-274.19	0/0:388:386,2:386:13825:2:72:0,-109.963,-1237.16	0/0:363:361,1:361:12827:1:36:0,-105.734,-1150.66	0/1:222:90,132:90:3187:132:4674:-353.925,0,-220.222	0/0:216:216,0:216:7670:0:0:0,-65.0225,-690.338	0/1:221:139,82:139:4976:82:2919:-195.683,0,-381.461	0/0:203:203,0:203:7236:0:0:0,-61.1091,-651.295	0/1:686:341,345:341:12153:345:12234:-894.238,0,-887.114	0/1:629:366,263:366:13063:263:9356:-652.16,0,-986.134	0/0:79:79,0:79:2806:0:0:0,-23.7814,-252.78	0/0:625:624,0:624:22317:0:0:0,-187.843,-2007.74	0/0:424:409,15:409:14630:15:532:0,-79.4313,-1268.23	0/1:233:153,80:153:5422:80:2826:-183.992,0,-417.973	0/1:18:9,9:9:305:9:312:-22.9968,0,-22.3587	0/0:70:70,0:70:2486:0:0:0,-21.0721,-223.988	0/1:23:13,10:13:460:10:360:-25.8183,0,-34.8117	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.037	0/0:498:498,0:498:17762:0:0:0,-149.913,-1596.48	0/1:298:161,137:161:5762:137:4861:-346.974,0,-428.979	0/1:130:68,62:68:2440:62:2164:-155.541,0,-180.716	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:260:139,121:139:4966:121:4275:-306.39,0,-368.821	0/1:86:52,34:52:1860:34:1212:-83.4838,0,-141.786	0/1:431:196,235:196:6996:235:8337:-620.468,0,-499.946	0/1:188:108,80:108:3864:80:2799:-195.283,0,-291.362	0/0:155:155,0:155:5531:0:0:0,-46.6596,-497.915	0/1:140:62,78:62:2215:78:2762:-206.624,0,-157.469	0/1:366:199,167:199:7121:167:5894:-419.714,0,-530.762	0/1:442:230,212:230:8180:212:7521:-543.729,0,-603.164	0/0:264:264,0:264:9444:0:0:0,-79.4719,-849.919	0/0:329:329,0:329:11729:0:0:0,-99.0389,-1055.48	0/0:330:330,0:330:11826:0:0:0,-99.3399,-1064.18	0/1:18:8,10:8:279:10:347:-26.1451,0,-20.029	0/1:302:141,161:141:5044:161:5748:-426.13,0,-363.195	0/1:169:89,79:89:3171:79:2828:-203.582,0,-234.83	0/1:46:23,23:23:828:23:824:-60.6219,0,-60.9967	0/1:400:228,172:228:8171:172:6093:-427.647,0,-614.861	0/1:135:65,70:65:2312:70:2485:-183.094,0,-167.699	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.2372	0/1:28:12,16:12:432:16:568:-43.023,0,-30.7924	0/0:254:254,0:254:9071:0:0:0,-76.4616,-816.369	0/0:307:306,1:306:10856:1:36:0,-88.8179,-973.35	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/1:491:279,212:279:9998:212:7486:-525.339,0,-751.946	0/0:507:507,0:507:18102:0:0:0,-152.622,-1628.78	0/0:177:177,0:177:6312:0:0:0,-53.2823,-568.176	0/0:290:290,0:290:10372:0:0:0,-87.2987,-933.398	0/0:373:371,2:371:13232:2:72:0,-105.447,-1183.85	0/1:320:126,194:126:4503:194:6898:-524.229,0,-309.106	0/0:112:112,0:112:3990:0:0:0,-33.7154,-359.063	0/0:152:152,0:152:5440:0:0:0,-45.7566,-489.729	0/0:201:201,0:201:7178:0:0:0,-60.507,-646.077	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.485	0/0:250:250,0:250:8908:0:0:0,-75.2575,-801.693	0/1:180:85,95:85:3028:95:3377:-249.522,0,-218.566	0/0:340:340,0:340:12126:0:0:0,-102.35,-1091.15	0/0:379:377,2:377:13406:2:72:0,-107.254,-1199.51	0/0:434:434,0:434:15547:0:0:0,-130.647,-1398.93	0/0:256:254,2:254:9078:2:72:0,-70.2294,-810.16	0/1:47:31,16:31:1104:16:576:-38.0195,0,-85.5222	0/0:274:270,4:270:9640:4:144:0,-69.1714,-854.113	0/1:299:143,156:143:5132:156:5540:-407.723,0,-372.004	0/0:421:417,4:417:14809:4:140:0,-113.789,-1319.61	0/0:221:221,0:221:7879:0:0:0,-66.5276,-708.361	0/0:167:167,0:167:5949:0:0:0,-50.272,-535.519	0/1:167:85,82:85:3027:82:2858:-206.777,0,-222.389	0/0:343:342,0:342:12213:0:0:0,-102.952,-1098.69	0/0:79:79,0:79:2807:0:0:0,-23.7814,-252.867	0/1:180:98,82:98:3500:82:2885:-205.487,0,-261.018	0/0:156:156,0:156:5559:0:0:0,-46.9607,-500.436	0/1:131:68,63:68:2420:63:2203:-159.061,0,-178.622	0/1:232:132,100:132:4709:100:3526:-247.47,0,-354.129	0/1:180:60,120:60:2135:120:4246:-327.956,0,-138.232	0/0:324:324,0:324:11516:0:0:0,-97.5337,-1036.32	0/0:251:251,0:251:8968:0:0:0,-75.5585,-807.103
chr08	8474945	.	CTCA	TTCC,TTCA	471064	PASS	AB=0.482445,0.515091;ABP=20.3928,15.8559;AC=152,36;AF=0.808511,0.191489;AN=188;AO=14030,3386;CIGAR=1X2M1X,1X3M;DP=17451;DPB=17480;DPRA=0,1.08515;EPP=30460.1,7355.62;EPPR=3.0103;GTI=0;LEN=4,1;MEANALT=1.84043,2.33333;MQM=59.9761,55.2634;MQMR=60;NS=94;NUMALT=2;ODDS=7.7844;PAIRED=0,0;PAIREDR=0;PAO=58.5,57.5;PQA=1594,1558;PQR=0;PRO=0;QA=485837,120697;QR=72;RO=2;RPL=7680,1849;RPP=276.789,65.4379;RPPR=3.0103;RPR=6350,1537;RUN=1,1;SAF=7679,1849;SAP=275.966,65.4379;SAR=6351,1537;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:92:0,90,2:0:0:90,2:3185,72:-286.517,-27.0927,0,-280.643,-20.858,-280.04	1/1:184:0,184,0:0:0:184,0:6382,0:-574.431,-55.3895,0,-574.431,-55.3895,-574.431	1/2:271:0,138,133:0:0:138,133:4785,4760:-776.46,-387.543,-346.001,-389.149,0,-349.112	1/1:436:0,434,0:0:0:434,0:14962,0:-1345.92,-130.647,0,-1345.92,-130.647,-1345.92	1/2:96:0,46,49:0:0:46,49:1598,1741:-271.683,-141.773,-127.925,-129.989,0,-115.239	1/2:127:0,47,80:0:0:47,80:1623,2849:-364.111,-232.253,-218.104,-132.208,0,-108.125	1/1:268:0,267,0:0:0:267,0:9271,0:-834.103,-80.375,0,-834.103,-80.375,-834.103	1/1:265:0,264,1:0:0:264,1:9148,36:-822.792,-79.4719,0,-819.854,-76.1747,-819.553	1/1:273:0,271,0:0:0:271,0:9370,0:-842.881,-81.5791,0,-842.881,-81.5791,-842.881	1/1:225:0,225,0:0:0:225,0:7686,0:-691.632,-67.7318,0,-691.632,-67.7318,-691.632	1/1:121:0,121,0:0:0:121,0:4216,0:-379.572,-36.4246,0,-379.572,-36.4246,-379.572	1/1:221:0,219,2:0:0:219,2:7552,72:-679.258,-65.9256,0,-673.383,-59.7511,-672.781	1/1:166:0,166,0:0:0:166,0:5807,0:-522.76,-49.971,0,-522.76,-49.971,-522.76	1/1:135:0,134,0:0:0:134,0:4611,0:-414.858,-40.338,0,-414.858,-40.338,-414.858	1/1:164:0,164,0:0:0:164,0:5694,0:-512.596,-49.3689,0,-512.596,-49.3689,-512.596	1/1:131:0,131,0:0:0:131,0:4531,0:-407.964,-39.4349,0,-407.964,-39.4349,-407.964	1/1:144:0,144,0:0:0:144,0:4982,0:-448.488,-43.3483,0,-448.488,-43.3483,-448.488	1/1:134:0,134,0:0:0:134,0:4623,0:-416.133,-40.338,0,-416.133,-40.338,-416.133	1/1:61:0,61,0:0:0:61,0:2141,0:-192.958,-18.3628,0,-192.958,-18.3628,-192.958	1/1:379:0,379,0:0:0:379,0:13304,0:-1197.14,-114.09,0,-1197.14,-114.09,-1197.14	1/1:308:0,307,0:0:0:307,0:10445,0:-939.716,-92.4162,0,-939.716,-92.4162,-939.716	1/2:152:0,42,109:0:0:42,109:1445,3867:-431.043,-313.69,-301.047,-117.374,0,-84.5616	1/1:145:0,144,0:0:0:144,0:5001,0:-449.891,-43.3483,0,-449.891,-43.3483,-449.891	1/2:226:0,125,101:0:0:125,101:4326,3608:-645.135,-293.589,-255.961,-351.601,0,-321.197	1/1:197:0,197,0:0:0:197,0:6831,0:-614.823,-59.3029,0,-614.823,-59.3029,-614.823	1/2:489:0,247,242:0:0:247,242:8466,8622:-1388.02,-700.746,-626.391,-687.328,0,-614.479	1/2:529:0,247,280:0:0:247,280:8492,10000:-1502.34,-812.725,-738.371,-689.583,0,-605.294	1/1:81:0,81,0:0:0:81,0:2849,0:-256.652,-24.3834,0,-256.652,-24.3834,-256.652	1/1:331:0,330,1:0:0:330,1:11387,36:-1024.4,-99.3399,0,-1021.48,-96.0622,-1021.17	1/1:201:0,189,12:0:0:189,12:6613,432:-594.794,-56.8947,0,-559.654,-21.4516,-556.042	1/2:254:0,121,131:0:0:121,131:4207,4689:-723.878,-381.835,-345.41,-342.036,0,-302.601	1/2:19:0,7,12:0:0:7,12:235,428:-54.1997,-35.1717,-33.0645,-19.371,0,-15.7587	1/1:38:0,38,0:0:0:38,0:1326,0:-119.58,-11.4391,0,-119.58,-11.4391,-119.58	1/2:10:0,7,3:0:0:7,3:246,108:-29.1684,-9.15007,-7.04286,-20.3751,0,-19.472	1/1:13:0,13,0:0:0:13,0:417,0:-37.8389,-3.91339,0,-37.8389,-3.91339,-37.8389	1/1:29:0,29,0:0:0:29,0:1027,0:-92.7434,-8.72987,0,-92.7434,-8.72987,-92.7434	1/1:442:0,441,0:0:0:441,0:15306,0:-1376.95,-132.754,0,-1376.95,-132.754,-1376.95	1/2:202:0,96,105:0:0:96,105:3276,3718:-567.862,-302.04,-273.141,-265.76,0,-234.152	1/2:108:0,58,49:0:0:58,49:2022,1739:-305.896,-141.459,-123.999,-164.429,0,-149.678	1/1:6:0,6,0:0:0:6,0:202,0:-18.5103,-1.80618,0,-18.5103,-1.80618,-18.5103	1/2:266:0,124,140:0:0:124,140:4292,4981:-753.589,-404.798,-367.47,-348.776,0,-306.632	1/2:54:0,29,25:0:0:29,25:1020,883:-155.159,-72.128,-63.3981,-83.3829,0,-75.8571	1/2:285:0,127,156:0:0:127,156:4400,5568:-810.043,-452.441,-414.21,-357.627,0,-310.667	1/2:178:1,80,96:1:36:80,96:2793,3423:-502.287,-275.407,-254.262,-224.244,0,-198.283	1/1:157:0,156,1:0:0:156,1:5358,36:-481.772,-46.9607,0,-478.835,-43.6634,-478.534	1/2:186:0,118,67:0:0:118,67:4110,2396:-528.967,-194.748,-159.226,-334.364,0,-314.195	1/2:256:0,140,116:0:0:140,116:4874,4131:-732.848,-336.517,-294.373,-396.623,0,-361.704	1/2:329:0,182,147:0:0:182,147:6275,5244:-935.935,-426.21,-371.422,-509.897,0,-465.646	1/1:176:0,175,0:0:0:175,0:6051,0:-544.355,-52.6803,0,-544.355,-52.6803,-544.355	1/1:220:0,220,0:0:0:220,0:7629,0:-686.619,-66.2266,0,-686.619,-66.2266,-686.619	1/1:241:0,239,0:0:0:239,0:8259,0:-742.962,-71.9462,0,-742.962,-71.9462,-742.962	1/2:12:1,7,4:1:36:7,4:248,144:-28.693,-8.79421,-9.62451,-17.26,0,-18.994	1/2:242:0,102,140:0:0:102,140:3533,5005:-694.715,-407.586,-376.881,-287.419,0,-245.275	1/2:113:0,67,46:0:0:67,46:2327,1613:-320.319,-131.158,-110.989,-189.509,0,-175.662	1/2:25:0,9,16:0:0:9,16:322,564:-72.5069,-46.2476,-43.5383,-26.615,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chr08	8563991	.	CGGCAGCT	CGGCGGCC,CGGCGGCT	147043	PASS	AB=0.522696,0.464924;ABP=12.7685,26.317;AC=153,35;AF=0.81383,0.18617;AN=188;AO=5315,1019;CIGAR=4M1X2M1X,4M1X3M;DP=6412;DPB=6412.62;DPRA=0,1.00045;EPP=8962.83,2189.76;EPPR=5.18177;GTI=3;LEN=8,1;MEANALT=2.1383,2.74359;MQM=59.9834,59.9019;MQMR=60;NS=94;NUMALT=2;ODDS=1.49444;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=29.5,0;PQR=0;PRO=0;QA=186653,36474;QR=36;RO=1;RPL=316,1016;RPP=8962.83,2189.76;RPPR=5.18177;RPR=4999,3;RUN=1,1;SAF=0,0;SAP=11544.4,2215.74;SAR=5315,1019;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:36:0,36,0:0:0:36,0:1271,0:-114.693,-10.8371,0,-114.693,-10.8371,-114.693	1/1:47:0,46,0:0:0:46,0:1618,0:-145.547,-13.8474,0,-145.547,-13.8474,-145.547	1/2:164:0,100,62:0:0:100,62:3528,2220:-468.396,-181.118,-151.015,-287.351,0,-268.687	1/1:194:0,191,0:0:0:191,0:6732,0:-605.624,-57.4967,0,-605.624,-57.4967,-605.624	1/2:27:0,10,17:0:0:10,17:347,604:-77.7772,-49.5731,-46.5628,-28.554,0,-23.4365	1/2:16:0,5,10:0:0:5,10:170,360:-43.2313,-29.4468,-27.9416,-13.8384,0,-10.8281	1/1:72:0,69,0:0:0:69,0:2442,0:-219.681,-20.7711,0,-219.681,-20.7711,-219.681	1/1:86:0,85,0:0:0:85,0:2988,0:-268.895,-25.5876,0,-268.895,-25.5876,-268.895	1/1:126:0,121,0:0:0:121,0:4229,0:-380.438,-36.4246,0,-380.438,-36.4246,-380.438	1/1:49:0,49,0:0:0:49,0:1730,0:-155.985,-14.7505,0,-155.985,-14.7505,-155.985	1/1:20:0,20,0:0:0:20,0:690,0:-62.4176,-6.0206,0,-62.4176,-6.0206,-62.4176	1/1:78:0,78,0:0:0:78,0:2741,0:-246.936,-23.4803,0,-246.936,-23.4803,-246.936	1/1:54:0,54,0:0:0:54,0:1903,0:-171.547,-16.2556,0,-171.547,-16.2556,-171.547	1/1:22:0,21,0:0:0:21,0:747,0:-67.1955,-6.32163,0,-67.1955,-6.32163,-67.1955	1/1:48:0,48,0:0:0:48,0:1702,0:-153.466,-14.4494,0,-153.466,-14.4494,-153.466	1/1:40:0,40,0:0:0:40,0:1377,0:-124.222,-12.0412,0,-124.222,-12.0412,-124.222	1/1:24:0,24,0:0:0:24,0:842,0:-76.0968,-7.22472,0,-76.0968,-7.22472,-76.0968	1/1:29:0,29,0:0:0:29,0:1027,0:-92.7432,-8.72987,0,-92.7432,-8.72987,-92.7432	1/1:32:0,32,0:0:0:32,0:1113,0:-100.475,-9.63296,0,-100.475,-9.63296,-100.475	1/1:64:0,64,0:0:0:64,0:2254,0:-203.124,-19.2659,0,-203.124,-19.2659,-203.124	1/1:155:0,152,0:0:0:152,0:5345,0:-480.858,-45.7566,0,-480.858,-45.7566,-480.858	1/2:73:1,33,37:1:36:33,37:1151,1332:-199.049,-105.743,-98.7466,-90.6638,0,-82.4634	1/1:119:0,117,0:0:0:117,0:4124,0:-371.091,-35.2205,0,-371.091,-35.2205,-371.091	1/2:40:0,22,17:0:0:22,17:749,612:-110.686,-49.9361,-43.3134,-60.742,0,-55.6245	1/1:62:0,62,0:0:0:62,0:2220,0:-200.064,-18.6639,0,-200.064,-18.6639,-200.064	1/2:160:0,86,71:0:0:86,71:3039,2548:-455.297,-207.8,-181.912,-247.549,0,-226.175	1/2:169:0,90,79:0:0:90,79:3145,2828:-486.806,-230.978,-203.885,-256.183,0,-232.401	1/1:24:0,24,0:0:0:24,0:828,0:-74.833,-7.22472,0,-74.833,-7.22472,-74.833	1/1:540:0,534,0:0:0:534,0:18836,0:-1694.54,-160.75,0,-1694.54,-160.75,-1694.54	1/1:69:0,67,2:0:0:67,2:2366,72:-212.839,-20.169,0,-206.964,-13.9343,-206.362	1/2:53:0,23,30:0:0:23,30:817,1060:-153.254,-86.6804,-79.7567,-66.9279,0,-57.897	1/2:16:0,10,5:0:0:10,5:354,180:-43.5941,-14.7536,-11.7433,-28.9031,0,-27.3979	1/1:24:0,24,0:0:0:24,0:831,0:-75.105,-7.22472,0,-75.105,-7.22472,-75.105	1/1:7:0,7,0:0:0:7,0:251,0:-22.9379,-2.10721,0,-22.9379,-2.10721,-22.9379	1/1:16:0,12,0:0:0:12,0:430,0:-38.0541,-3.61236,0,-38.0541,-3.61236,-38.0541	1/1:18:0,18,0:0:0:18,0:631,0:-57.1156,-5.41854,0,-57.1156,-5.41854,-57.1156	1/1:128:0,128,0:0:0:128,0:4481,0:-403.469,-38.5318,0,-403.469,-38.5318,-403.469	1/2:113:0,78,32:0:0:78,32:2732,1148:-315.912,-93.6523,-70.1719,-222.278,0,-212.645	1/2:47:0,19,28:0:0:19,28:653,1000:-134.906,-81.8865,-76.167,-53.3687,0,-44.9399	1/1:7:0,7,0:0:0:7,0:248,0:-22.6642,-2.10721,0,-22.6642,-2.10721,-22.6642	1/2:109:0,48,58:0:0:48,58:1678,2076:-305.861,-169.358,-154.908,-136.561,0,-119.102	1/2:19:0,11,8:0:0:11,8:394,288:-55.9903,-23.8592,-20.5478,-32.4902,0,-30.082	1/2:130:0,75,54:0:0:75,54:2646,1940:-373.715,-158.261,-135.683,-215.451,0,-199.195	1/2:47:0,15,32:0:0:15,32:539,1152:-138.329,-94.3572,-89.8417,-44.3307,0,-34.6978	1/1:44:0,44,0:0:0:44,0:1559,0:-140.601,-13.2453,0,-140.601,-13.2453,-140.601	1/2:84:0,52,29:0:0:52,29:1827,1021:-231.815,-83.1113,-67.4577,-148.696,0,-139.967	1/2:52:0,42,9:0:0:42,9:1472,320:-145.849,-26.0737,-13.4304,-119.77,0,-117.061	1/2:92:0,54,36:0:0:54,36:1915,1296:-261.754,-105.74,-89.4845,-156.012,0,-145.175	1/1:73:0,72,0:0:0:72,0:2563,0:-230.561,-21.6742,0,-230.561,-21.6742,-230.561	1/1:71:0,71,0:0:0:71,0:2482,0:-223.634,-21.3731,0,-223.634,-21.3731,-223.634	1/1:73:0,72,0:0:0:72,0:2517,0:-226.503,-21.6742,0,-226.503,-21.6742,-226.503	1/2:9:0,6,2:0:0:6,2:215,72:-23.4086,-5.87483,-4.06865,-17.5334,0,-16.9313	1/2:57:0,25,32:0:0:25,32:880,1144:-165.273,-93.6356,-86.1099,-71.9919,0,-62.3589	1/2:38:0,8,30:0:0:8,30:288,1076:-111.622,-88.122,-85.7137,-23.8592,0,-14.8283	1/2:14:0,10,4:0:0:10,4:358,144:-41.3028,-12.1095,-9.0992,-29.5526,0,-28.3485	1/2:78:0,42,36:0:0:42,36:1479,1284:-225.301,-104.897,-92.2533,-120.759,0,-109.922	1/2:32:0,22,10:0:0:22,10:766,356:-91.6525,-29.3709,-22.74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chr08	8838356	.	TAC	TAG,GAG	210369	PASS	AB=0.553599,0.445137;ABP=279.316,292.506;AC=96,92;AF=0.510638,0.489362;AN=188;AO=6160,4929;CIGAR=2M1X,1X1M1X;DP=11103;DPB=11103.7;DPRA=0,8.02391;EPP=13379.3,10191.4;EPPR=5.18177;GTI=2;LEN=1,3;MEANALT=2.11702,2.1413;MQM=59.8726,59.6754;MQMR=60;NS=94;NUMALT=2;ODDS=1.87333;PAIRED=0,0;PAIREDR=0;PAO=1,1;PQA=36,36;PQR=0;PRO=0;QA=213466,166926;QR=25;RO=1;RPL=0,60;RPP=13379.3,10191.4;RPPR=5.18177;RPR=6160,4869;RUN=1,1;SAF=0,0;SAP=13379.3,10706.2;SAR=6160,4929;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:35:0,25,10:0:0:25,10:842,346:-96.6782,-28.46,-20.9342,-68.5614,0,-65.5511	1/2:74:0,50,24:0:0:50,24:1753,778:-205.762,-63.0948,-48.0433,-143,0,-135.775	1/2:298:0,197,101:0:0:197,101:6879,3469:-841.534,-282.016,-222.713,-559.863,0,-529.459	1/2:427:0,183,243:0:0:183,243:6367,8332:-1194.13,-676.47,-621.382,-517.724,0,-444.574	1/2:113:0,50,62:0:0:50,62:1732,2095:-310.515,-169.751,-154.699,-140.767,0,-122.103	1/2:143:0,64,79:0:0:64,79:2246,2592:-392.483,-209.711,-190.445,-183.113,0,-159.332	1/2:124:0,59,65:0:0:59,65:1972,2258:-343.555,-183.912,-166.151,-159.984,0,-140.417	1/2:141:0,100,40:0:0:100,40:3464,1345:-390.463,-108.936,-78.8335,-281.506,0,-269.465	1/2:95:0,45,50:0:0:45,50:1521,1664:-258.273,-134.982,-121.435,-123.627,0,-108.576	1/2:167:0,83,84:0:0:83,84:2893,2819:-463.864,-228.584,-203.599,-235.621,0,-210.335	1/2:93:0,48,45:0:0:48,45:1639,1533:-257.71,-124.711,-110.262,-133.34,0,-119.793	1/2:89:0,38,51:0:0:38,51:1286,1709:-242.961,-138.721,-127.282,-104.576,0,-89.2235	1/2:73:0,34,39:0:0:34,39:1160,1310:-200.57,-106.444,-96.2086,-94.4652,0,-82.725	1/2:69:0,29,40:0:0:29,40:989,1377:-192.412,-112.169,-103.439,-80.5858,0,-68.5446	1/2:80:0,43,37:0:0:43,37:1487,1290:-226.084,-105.255,-92.3111,-121.175,0,-110.037	1/2:62:0,30,32:0:0:30,32:1046,1094:-174.201,-89.1299,-80.099,-85.4161,0,-75.7832	1/2:106:0,35,71:0:0:35,71:1247,2400:-296.497,-194.849,-184.313,-101.998,0,-80.6249	1/2:72:0,47,25:0:0:47,25:1566,854:-196.375,-69.6451,-55.4967,-127.069,0,-119.543	1/2:67:0,38,29:0:0:38,29:1288,965:-182.854,-78.4163,-66.9771,-104.773,0,-96.0436	1/2:181:0,79,101:0:0:79,101:2795,3455:-508.05,-280.391,-256.609,-227.649,0,-197.245	1/2:244:0,110,134:0:0:110,134:3746,4562:-673.864,-369.971,-336.858,-304.233,0,-263.895	1/2:67:0,48,19:0:0:48,19:1689,633:-189.066,-51.5596,-37.1102,-137.845,0,-132.125	1/2:89:0,45,44:0:0:45,44:1556,1524:-250.627,-124.192,-110.646,-126.781,0,-113.536	1/2:122:0,107,14:0:0:107,14:3704,476:-339.572,-38.581,-6.3708,-300.973,0,-296.758	1/2:49:0,30,19:0:0:30,19:1036,644:-136.733,-52.5587,-43.5278,-84.5152,0,-78.7957	1/2:328:0,203,125:0:0:203,125:7049,4177:-911.519,-338.482,-277.373,-573.376,0,-535.747	1/2:231:0,113,118:0:0:113,118:3939,4028:-647.496,-327.159,-293.142,-320.682,0,-285.161	1/2:41:0,28,13:0:0:28,13:958,406:-110.692,-32.9142,-24.4853,-78.0999,0,-74.1865	1/2:199:0,129,70:0:0:129,70:4469,2395:-557.935,-194.723,-155.89,-363.555,0,-342.483	1/2:185:0,84,101:0:0:84,101:2917,3391:-512.127,-274.989,-249.703,-237.48,0,-207.076	1/2:147:0,72,74:0:0:72,74:2491,2512:-406.123,-203.702,-182.028,-202.423,0,-180.147	1/2:13:0,6,7:0:0:6,7:203,245:-36.7305,-20.2837,-18.4775,-16.7903,0,-14.6831	1/2:33:0,13,20:0:0:13,20:440,664:-89.7183,-54.0458,-50.1325,-36.0082,0,-29.9876	1/2:12:0,3,9:0:0:3,9:108,302:-33.6138,-24.7954,-23.8923,-9.17208,0,-6.46281	1/2:12:0,3,9:0:0:3,9:108,278:-31.4373,-22.6123,-21.7092,-9.17208,0,-6.46281	1/1:21:0,21,0:0:0:21,0:726,0:-65.6585,-6.32163,0,-65.6585,-6.32163,-65.6585	1/2:207:0,100,107:0:0:100,107:3496,3587:-575.178,-290.768,-260.665,-284.752,0,-252.542	1/2:203:0,125,78:0:0:125,78:4377,2587:-565.662,-209.586,-171.958,-356.414,0,-332.934	1/2:70:0,41,29:0:0:41,29:1434,980:-196.436,-79.7758,-67.4336,-117.003,0,-108.273	1/2:15:0,8,7:0:0:8,7:276,240:-42.2501,-19.8268,-17.4185,-22.767,0,-20.6598	1/2:186:0,114,72:0:0:114,72:3977,2429:-520.627,-197.173,-162.856,-323.795,0,-302.121	1/2:75:0,37,38:0:0:37,38:1266,1241:-203.3,-100.537,-89.3991,-103.097,0,-91.6581	1/2:106:0,75,31:0:0:75,31:2591,1031:-294.264,-83.7569,-61.1796,-210.844,0,-201.512	1/2:76:1,45,30:1:25:45,30:1578,1041:-210.878,-82.7698,-71.1691,-126.559,0,-119.475	1/2:67:0,34,33:0:0:34,33:1152,1071:-180.163,-86.7495,-76.5145,-93.7447,0,-83.8107	1/2:102:0,72,30:0:0:72,30:2543,997:-287.981,-80.9986,-59.3245,-207.321,0,-198.29	1/2:109:0,71,37:0:0:71,37:2485,1256:-304.177,-101.99,-80.6169,-202.33,0,-191.191	1/2:254:0,117,136:0:0:117,136:4058,4628:-704.962,-375.115,-339.895,-329.831,0,-288.891	1/2:110:0,63,47:0:0:63,47:2200,1591:-308.279,-129.323,-110.358,-179.299,0,-165.151	1/2:184:0,126,58:0:0:126,58:4357,1988:-515.717,-161.683,-123.754,-354.378,0,-336.918	1/2:268:0,137,130:0:0:137,130:4767,4368:-741.538,-353.927,-312.686,-387.711,0,-348.578	1/2:32:0,19,13:0:0:19,13:656,443:-89.5766,-36.2815,-30.5619,-53.6375,0,-49.7241	1/2:179:0,129,50:0:0:129,50:4478,1689:-500.955,-137.234,-98.4014,-364.061,0,-349.01	1/2:54:0,31,23:0:0:31,23:1094,801:-154.57,-65.4842,-56.1523,-89.4363,0,-82.5126	1/2:46:0,27,19:0:0:27,19:943,617:-126.838,-50.1173,-41.9895,-77.0554,0,-71.3358	1/2:166:0,102,64:0:0:102,64:3472,2165:-457.268,-175.844,-145.138,-281.763,0,-262.497	1/2:73:0,40,33:0:0:40,33:1361,1130:-202.46,-92.0614,-80.0202,-110.74,0,-100.806	1/2:18:0,13,5:0:0:13,5:446,165:-49.8885,-13.669,-9.75562,-36.553,0,-35.0479	1/2:37:0,24,13:0:0:24,13:843,435:-104.179,-35.5562,-28.3315,-68.9629,0,-65.0495	1/2:61:0,48,13:0:0:48,13:1633,450:-169.369,-36.9117,-22.4622,-132.802,0,-128.888	1/2:132:0,63,69:0:0:63,69:2194,2342:-368.617,-190.201,-171.236,-178.701,0,-157.93	1/1:9:0,9,0:0:0:9,0:311,0:-28.3237,-2.70927,0,-28.3237,-2.70927,-28.3237	1/2:270:0,195,75:0:0:195,75:6718,2558:-752.37,-206.703,-148.003,-546.007,0,-523.43	1/2:217:0,109,108:0:0:109,108:3825,3667:-608.698,-297.407,-264.595,-311.636,0,-279.124	1/2:59:0,40,19:0:0:40,19:1398,659:-167.641,-53.9137,-41.8725,-114.074,0,-108.355	1/2:171:0,79,92:0:0:79,92:2707,3111:-472.274,-252.523,-228.742,-220.091,0,-192.397	1/2:255:0,117,137:0:0:117,137:4057,4653:-707.246,-377.489,-342.268,-329.89,0,-288.649	1/2:139:0,113,25:0:0:113,25:3951,827:-388.297,-66.868,-32.8516,-321.424,0,-313.898	1/2:33:0,13,20:0:0:13,20:436,700:-92.3785,-57.3018,-53.3884,-35.4165,0,-29.3959	1/2:84:0,64,20:0:0:64,20:2202,689:-235.14,-56.3064,-37.0405,-179.178,0,-173.158	1/2:77:0,57,20:0:0:57,20:1949,642:-210.258,-52.0628,-34.9041,-158.522,0,-152.501	1/2:45:0,23,22:0:0:23,22:750,748:-121.551,-61.0076,-54.0839,-60.8766,0,-54.2539	1/2:141:0,60,81:0:0:60,81:2077,2760:-393.052,-224.261,-206.199,-169.135,0,-144.752	1/2:95:0,46,49:0:0:46,49:1579,1629:-260.339,-132.132,-118.285,-128.545,0,-113.795	1/2:117:0,65,52:0:0:65,52:2282,1730:-326.053,-140.32,-120.754,-186.073,0,-170.419	1/2:269:0,133,136:0:0:133,136:4673,4689:-760.961,-380.609,-340.572,-380.699,0,-339.759	1/2:195:0,125,70:0:0:125,70:4346,2404:-548.888,-195.541,-157.912,-353.692,0,-332.62	1/2:209:0,97,112:0:0:97,112:3347,3808:-581.052,-309.146,-279.946,-272.249,0,-238.534	1/2:13:0,8,5:0:0:8,5:284,160:-36.3722,-13.2104,-10.8021,-23.4951,0,-21.99	1/2:209:0,81,128:0:0:81,128:2790,4329:-577.875,-351.259,-326.876,-226.958,0,-188.426	1/2:194:0,110,83:0:0:110,83:3875,2766:-539.418,-223.942,-190.829,-315.566,0,-290.581	1/2:233:0,110,123:0:0:110,123:3781,4167:-645.149,-338.109,-304.995,-307.381,0,-270.354	1/2:78:0,51,27:0:0:51,27:1748,931:-217.875,-75.9736,-60.6211,-142.246,0,-134.118	1/2:57:0,40,17:0:0:40,17:1408,562:-160.412,-45.7726,-33.7314,-114.976,0,-109.859	1/2:72:0,51,21:0:0:51,21:1762,708:-200.856,-57.7128,-42.3603,-143.483,0,-137.161	1/2:106:0,71,35:0:0:71,35:2464,1197:-297.793,-97.4943,-76.1211,-200.642,0,-190.106	1/2:56:0,30,26:0:0:30,26:1042,888:-157.113,-72.3995,-63.3686,-85.0571,0,-77.2303	1/2:86:0,45,41:0:0:45,41:1576,1398:-241.997,-113.769,-100.223,-128.573,0,-116.231	1/2:83:0,29,54:0:0:29,54:1001,1836:-230.579,-149.254,-140.524,-81.6679,0,-65.4123	1/2:38:0,26,12:0:0:26,12:882,391:-103.415,-31.885,-24.0582,-71.8603,0,-68.248	1/2:84:0,50,34:0:0:50,34:1749,1157:-236.456,-94.1923,-79.1408,-142.607,0,-132.372	1/2:60:0,44,16:0:0:44,16:1520,531:-166.79,-43.2869,-30.0416,-123.838,0,-119.022	1/2:111:0,68,43:0:0:68,43:2310,1474:-307.35,-120.005,-99.5351,-187.686,0,-174.742	1/2:106:0,48,57:0:0:48,57:1678,1963:-295.94,-159.437,-144.988,-136.51,0,-119.351
chr08	8838379	.	TGTA	GGTG,AGTG	223709	PASS	AB=0.565311,0.429681;ABP=432.162,500.49;AC=96,92;AF=0.510638,0.489362;AN=188;AO=6580,4977;CIGAR=1X2M1X,1X2M1X;DP=11615;DPB=11646;DPRA=0,7.86889;EPP=14109.5,10689.2;EPPR=0;GTI=3;LEN=4,4;MEANALT=2.55319,2.58696;MQM=59.8591,59.74;MQMR=0;NS=94;NUMALT=2;ODDS=0.111105;PAIRED=0,0;PAIREDR=0;PAO=62,62;PQA=34,2182;PQR=0;PRO=0;QA=228548,174023;QR=0;RO=0;RPL=21,14;RPP=14109.5,10689.2;RPPR=0;RPR=6559,4963;RUN=1,1;SAF=0,0;SAP=14291.3,10810.4;SAR=6580,4977;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:35:0,27,8:0:0:27,8:923,273:-97.1967,-22.2412,-14.1134,-75.0419,0,-72.6337	1/2:78:0,53,25:0:0:53,25:1839,851:-218.864,-69.3726,-53.418,-149.833,0,-142.308	1/2:305:0,204,99:0:0:204,99:7089,3490:-860.58,-284.267,-222.857,-576.428,0,-546.626	1/2:453:0,199,251:0:0:199,251:6947,8861:-1286.61,-721.572,-661.667,-565.059,0,-489.5	1/2:115:0,60,55:0:0:60,55:2059,1897:-321.405,-154.222,-136.16,-167.296,0,-150.739	1/2:145:0,67,78:0:0:67,78:2343,2667:-407.182,-216.575,-196.406,-190.761,0,-167.28	1/2:128:0,60,67:0:0:60,67:2092,2363:-362.661,-192.522,-174.461,-170.256,0,-150.087	1/2:149:0,112,36:0:0:112,36:3831,1272:-414.658,-103.717,-70.0014,-311.06,0,-300.223	1/2:101:0,50,51:0:0:50,51:1707,1757:-281.556,-143.051,-127.999,-138.848,0,-123.496	1/2:174:0,87,85:0:0:87,85:3022,2991:-489.198,-243.523,-217.333,-245.721,0,-220.134	1/2:95:0,48,47:0:0:48,47:1660,1612:-266.105,-131.216,-116.766,-135.234,0,-121.085	1/2:89:0,38,51:0:0:38,51:1321,1774:-251.964,-144.577,-133.138,-107.734,0,-92.3816	1/2:79:0,37,41:0:0:37,41:1298,1440:-222.942,-117.309,-106.171,-105.749,0,-93.4071	1/2:73:0,31,41:0:0:31,41:1056,1432:-202.13,-116.464,-107.132,-85.6524,0,-73.3102	1/2:81:0,44,37:0:0:44,37:1524,1313:-231.18,-107.325,-94.0801,-124.205,0,-113.067	1/2:64:0,31,33:0:0:31,33:1068,1172:-182.599,-95.8537,-86.5218,-87.0943,0,-77.1603	1/2:113:0,38,75:0:0:38,75:1317,2609:-319.508,-212.466,-201.027,-107.389,0,-84.8118	1/2:75:0,48,27:0:0:48,27:1660,954:-212.919,-78.0327,-63.5833,-135.237,0,-127.109	1/2:70:0,41,29:0:0:41,29:1381,1000:-193.47,-81.5739,-69.2317,-112.238,0,-103.508	1/2:190:0,85,104:0:0:85,104:2953,3627:-535.086,-295.015,-269.427,-240.118,0,-208.811	1/2:256:0,118,137:0:0:118,137:4093,4790:-722.433,-389.738,-354.217,-332.784,0,-291.542	1/2:68:0,50,17:0:0:50,17:1757,599:-191.919,-48.8935,-33.842,-143.15,0,-138.033	1/2:88:0,45,43:0:0:45,43:1529,1495:-245.706,-121.695,-108.149,-124.164,0,-111.219	1/2:124:0,109,15:0:0:109,15:3803,517:-351.641,-42.3376,-9.52531,-309.649,0,-305.133	1/2:52:0,32,20:0:0:32,20:1105,689:-146.086,-56.3086,-46.6756,-90.1216,0,-84.101	1/2:349:0,220,125:0:0:220,125:7626,4367:-975.063,-355.242,-289.015,-619.842,0,-582.213	1/2:241:0,122,119:0:0:122,119:4262,4157:-684.955,-338.285,-301.559,-346.835,0,-311.013	1/2:41:0,28,12:0:0:28,12:984,417:-113.986,-33.8898,-25.461,-80.0881,0,-76.4757	1/2:210:0,144,66:0:0:144,66:5021,2296:-595.2,-186.837,-143.489,-408.515,0,-388.647	1/2:189:0,87,102:0:0:87,102:3035,3548:-535.415,-288.568,-262.379,-247.01,0,-216.305	1/2:150:0,77,73:0:0:77,73:2660,2565:-425.019,-208.9,-185.721,-216.3,0,-194.325	1/2:13:0,6,7:0:0:6,7:202,252:-37.2755,-20.9217,-19.1156,-16.701,0,-14.5938	1/2:33:0,13,20:0:0:13,20:459,699:-94.5858,-57.2061,-53.2927,-37.7312,0,-31.7106	1/2:13:0,4,9:0:0:4,9:142,316:-37.641,-26.0695,-24.8654,-11.9251,0,-9.21582	1/2:13:0,3,9:0:0:3,9:107,299:-33.0042,-24.2738,-23.3707,-8.80998,0,-6.10071	1/1:22:0,22,0:0:0:22,0:749,0:-67.7257,-6.62266,0,-67.7257,-6.62266,-67.7257	1/2:217:0,105,110:0:0:105,110:3685,3850:-613.116,-313.218,-281.609,-299.919,0,-266.806	1/2:216:0,137,76:0:0:137,76:4757,2610:-598.692,-212.028,-170.787,-386.767,0,-363.888	1/2:75:0,46,29:0:0:46,29:1620,1006:-214.003,-82.1191,-68.2717,-132.233,0,-123.503	1/2:15:0,8,7:0:0:8,7:275,251:-43.1547,-20.8306,-18.4224,-22.6756,0,-20.5684	1/2:198:0,126,71:0:0:126,71:4368,2477:-556.623,-201.598,-163.668,-355.175,0,-333.802	1/2:80:0,41,39:0:0:41,39:1390,1322:-220.24,-107.529,-95.1865,-113.05,0,-101.31	1/2:112:0,80,31:0:0:80,31:2802,1086:-316.432,-88.534,-64.4516,-228.063,0,-218.731	1/2:81:0,49,31:0:0:49,31:1709,1097:-228.338,-89.3485,-74.598,-138.982,0,-129.65	1/2:75:0,42,33:0:0:42,33:1449,1126:-209.423,-91.7048,-79.0616,-118.061,0,-108.127	1/2:106:0,73,29:0:0:73,29:2526,1013:-287.211,-82.4439,-60.4687,-204.807,0,-196.077	1/2:116:0,79,37:0:0:79,37:2734,1292:-326.792,-105.238,-81.4571,-221.703,0,-210.564	1/2:263:0,128,134:0:0:128,134:4467,4716:-747.355,-384.027,-345.495,-363.465,0,-323.127	1/2:116:0,67,49:0:0:67,49:2339,1685:-327.431,-137.176,-117.007,-190.601,0,-175.85	1/2:192:0,132,60:0:0:132,60:4630,2127:-550.363,-173.586,-133.85,-377.13,0,-359.068	1/2:279:0,144,133:0:0:144,133:5032,4653:-787.907,-378.568,-335.22,-409.358,0,-369.321	1/2:34:0,21,13:0:0:21,13:716,465:-96.3552,-38.2748,-31.9532,-58.4315,0,-54.5181	1/2:190:0,137,52:0:0:137,52:4732,1843:-534.586,-150.241,-108.999,-384.445,0,-368.792	1/2:55:0,32,23:0:0:32,23:1145,804:-159.129,-65.7552,-56.1222,-93.7272,0,-86.8035	1/2:49:0,30,18:0:0:30,18:1025,621:-133.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chr08	8838409	.	G	T	18966.7	PASS	AB=0.325266;ABP=1175.45;AC=34;AF=0.180851;AN=188;AO=1448;CIGAR=1X;DP=11521;DPB=11521;DPRA=1.37869;EPP=3147.3;EPPR=21876.3;GTI=2;LEN=1;MEANALT=1;MQM=59.5698;MQMR=59.8442;NS=94;NUMALT=1;ODDS=1.5218;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51683;QR=360741;RO=10073;RPL=1448;RPP=3147.3;RPPR=21876.3;RPR=0;RUN=1;SAF=0;SAP=3147.3;SAR=1448;SRF=0;SRP=21876.3;SRR=10073;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.342	0/0:78:78,0:78:2784:0:0:0,-23.4803,-250.798	0/1:301:210,91:210:7528:91:3241:-201.27,0,-586.923	0/0:449:448,1:448:16048:1:25:0,-132.665,-1441.29	0/1:111:81,30:81:2888:30:1072:-63.3653,0,-226.734	0/1:144:106,38:106:3789:38:1356:-78.9608,0,-297.836	0/0:126:126,0:126:4516:0:0:0,-37.9298,-406.6	0/0:146:146,0:146:5196:0:0:0,-43.9504,-467.584	0/0:99:99,0:99:3552:0:0:0,-29.802,-319.877	0/0:171:171,0:171:6112:0:0:0,-51.4761,-550.168	0/0:96:96,0:96:3444:0:0:0,-28.8989,-310.17	0/0:90:90,0:90:3202:0:0:0,-27.0927,-288.374	0/0:80:80,0:80:2846:0:0:0,-24.0824,-256.368	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.029	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.709	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.303	0/0:111:111,0:111:3952:0:0:0,-33.4143,-355.821	0/0:78:78,0:78:2800:0:0:0,-23.4803,-252.184	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.674	0/0:188:187,1:187:6692:1:36:0,-52.9954,-598.733	0/0:254:254,0:254:9112:0:0:0,-76.4616,-819.24	0/1:69:34,35:34:1224:35:1260:-92.9344,0,-89.6927	0/0:84:84,0:84:3008:0:0:0,-25.2865,-270.947	0/1:122:61,61:61:2192:61:2177:-159.453,0,-160.811	0/0:52:52,0:52:1860:0:0:0,-15.6536,-167.68	0/1:345:235,110:235:8436:110:3926:-249.67,0,-655.37	0/1:241:191,50:191:6856:50:1788:-88.639,0,-544.339	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.749	0/0:207:207,0:207:7416:0:0:0,-62.3132,-667.483	0/0:185:184,1:184:6596:1:32:0,-52.4912,-590.501	0/1:146:107,39:107:3832:39:1395:-81.8955,0,-301.117	0/0:13:12,1:12:432:1:36:0,-0.320217,-35.628	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.026	0/0:13:13,0:13:456:0:0:0,-3.91339,-41.3732	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0962	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:217:217,0:217:7788:0:0:0,-65.3235,-700.764	0/1:213:153,60:153:5469:60:2129:-127.699,0,-428.193	0/1:75:54,21:54:1944:21:744:-44.7022,0,-152.659	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:195:134,61:134:4800:61:2177:-137.491,0,-373.424	0/1:77:67,10:67:2396:10:360:-9.56499,0,-192.713	0/1:114:65,49:65:2328:49:1741:-122.633,0,-174.685	0/1:79:54,25:54:1940:25:900:-57.5268,0,-151.095	0/0:74:74,0:74:2636:0:0:0,-22.2762,-237.485	0/1:102:58,44:58:2067:44:1574:-111.228,0,-155.595	0/1:117:75,42:75:2688:42:1504:-99.7983,0,-206.934	0/1:265:217,48:217:7796:48:1705:-73.9538,0,-621.673	0/0:116:116,0:116:4152:0:0:0,-34.9195,-373.859	0/0:190:189,1:189:6764:1:36:0,-53.6472,-605.263	0/0:278:278,0:278:9968:0:0:0,-83.6863,-897.041	0/1:33:22,11:22:788:11:392:-25.6861,0,-61.3108	0/1:186:108,78:108:3860:78:2773:-193.537,0,-291.598	0/1:55:36,19:36:1296:19:680:-44.9725,0,-100.387	0/1:49:39,10:39:1404:10:360:-17.9938,0,-111.909	0/1:181:129,52:129:4620:52:1868:-113.865,0,-361.466	0/1:77:55,22:55:1968:22:788:-48.0609,0,-154.206	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:39:31,8:31:1116:8:288:-14.5263,0,-89.0106	0/0:68:68,0:68:2432:0:0:0,-20.47,-219.103	0/0:139:138,1:138:4939:1:36:0,-38.2449,-441.054	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:284:170,114:170:6088:114:4081:-281.974,0,-462.528	0/0:222:220,2:220:7896:2:68:0,-60.3709,-704.193	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/0:177:177,0:177:6336:0:0:0,-53.2823,-570.321	0/0:263:261,2:261:9340:2:72:0,-72.3342,-833.58	0/1:141:41,100:41:1468:100:3554:-277.613,0,-89.9663	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.5	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.064	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.59	0/0:152:152,0:152:5432:0:0:0,-45.7566,-489.006	0/1:97:75,22:75:2688:22:780:-41.3094,0,-212.905	0/0:122:122,0:122:4384:0:0:0,-36.7257,-394.725	0/0:281:281,0:281:10060:0:0:0,-84.5894,-904.699	0/0:199:199,0:199:7128:0:0:0,-59.905,-641.566	0/0:218:218,0:218:7792:0:0:0,-65.6245,-701.189	0/1:13:6,7:6:216:7:252:-19.1156,0,-15.8771	0/0:217:217,0:217:7768:0:0:0,-65.3235,-699.14	0/1:201:141,60:141:5032:60:2133:-131.676,0,-392.511	0/0:237:237,0:237:8438:0:0:0,-71.3441,-759.4	0/0:85:85,0:85:3048:0:0:0,-25.5875,-274.549	0/0:59:59,0:59:2120:0:0:0,-17.7608,-191.066	0/1:76:47,29:47:1680:29:1044:-71.2584,0,-128.609	0/0:112:112,0:112:4020:0:0:0,-33.7154,-361.988	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.598	0/1:91:67,24:67:2408:24:864:-50.6582,0,-189.579	0/0:87:87,0:87:3107:0:0:0,-26.1896,-279.84	0/1:36:25,11:25:896:11:392:-24.783,0,-70.114	0/1:88:61,27:61:2180:27:968:-60.9137,0,-169.962	0/1:58:28,30:28:1004:30:1076:-79.6884,0,-73.2161	0/0:118:118,0:118:4240:0:0:0,-35.5215,-381.775	0/0:110:110,0:110:3948:0:0:0,-33.1133,-355.49
chr08	8841434	.	G	A	54002.9	PASS	AB=0.517739;ABP=20.8066;AC=36;AF=0.191489;AN=188;AO=3422;CIGAR=1X;DP=16582;DPB=16582;DPRA=1.18284;EPP=7373.11;EPPR=28453.8;GTI=0;LEN=1;MEANALT=1;MQM=40.8591;MQMR=43.045;NS=94;NUMALT=1;ODDS=0.623083;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=122161;QR=467617;RO=13158;RPL=7;RPP=7373.11;RPPR=28453.8;RPR=3415;RUN=1;SAF=0;SAP=7433.79;SAR=3422;SRF=0;SRP=28575.2;SRR=13158;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:31:31,0:31:1100:0:0:0,-9.33193,-97.801	0/0:243:243,0:243:8651:0:0:0,-73.1503,-761.797	0/1:184:93,91:93:3313:91:3256:-228.273,0,-235.618	0/0:429:429,0:429:15289:0:0:0,-129.142,-1342.88	0/1:95:54,41:54:1910:41:1464:-98.306,0,-140.108	0/1:187:88,99:88:3118:99:3544:-249.775,0,-219.866	0/0:208:208,0:208:7385:0:0:0,-62.6142,-648.346	0/0:191:191,0:191:6772:0:0:0,-57.4967,-598.466	0/0:106:106,0:106:3765:0:0:0,-31.9092,-331.244	0/0:174:174,0:174:6184:0:0:0,-52.3792,-544.51	0/0:175:175,0:175:6158:0:0:0,-52.6802,-536.508	0/0:127:127,0:127:4472:0:0:0,-38.2308,-394.304	0/0:95:95,0:95:3336:0:0:0,-28.5978,-293.889	0/0:221:221,0:221:7820:0:0:0,-66.5276,-687.64	0/0:104:104,0:104:3715:0:0:0,-31.3071,-325.792	0/0:86:86,0:86:3019:0:0:0,-25.8886,-266.067	0/0:171:171,0:171:6101:0:0:0,-51.4761,-538.176	0/0:110:110,0:110:3889:0:0:0,-33.1133,-343.48	0/0:70:70,0:70:2503:0:0:0,-21.0721,-220.089	0/0:424:424,0:424:15109:0:0:0,-127.637,-1328.58	0/0:221:221,0:221:7865:0:0:0,-66.5276,-691.326	0/1:215:67,148:67:2382:148:5280:-391.828,0,-144.14	0/0:39:39,0:39:1387:0:0:0,-11.7402,-122.236	0/1:154:82,72:82:2927:72:2568:-177.564,0,-210.813	0/0:126:126,0:126:4495:0:0:0,-37.9298,-393.479	0/1:889:416,473:416:14795:473:16914:-1191.08,0,-1031.78	0/1:338:168,170:168:5993:170:6075:-427.383,0,-424.143	0/0:46:46,0:46:1637:0:0:0,-13.8474,-144.521	0/0:409:409,0:409:14593:0:0:0,-123.121,-1279.67	0/0:483:450,33:450:15955:33:1188:0,-41.4888,-1299.02	0/1:155:92,63:92:3285:63:2251:-149.147,0,-241.988	0/1:15:4,11:4:140:11:392:-29.9895,0,-8.18466	0/0:70:70,0:70:2487:0:0:0,-21.0721,-218.556	0/1:7:4,3:4:144:3:108:-7.63874,0,-11.0547	0/0:18:18,0:18:636:0:0:0,-5.41854,-56.0374	0/0:25:25,0:25:891:0:0:0,-7.52575,-78.8009	0/0:268:268,0:268:9469:0:0:0,-80.676,-832.606	0/1:215:115,100:115:4106:100:3583:-244.62,0,-291.318	0/1:141:73,68:73:2579:68:2414:-167.592,0,-184.662	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.2734	0/1:323:149,174:149:5321:174:6232:-445.569,0,-369.768	0/1:61:24,37:24:860:37:1317:-94.2029,0,-57.6866	0/1:271:116,155:116:4085:155:5504:-396.961,0,-278.096	0/1:97:38,59:38:1351:59:2087:-151.478,0,-89.3279	0/0:79:79,0:79:2817:0:0:0,-23.7814,-245.871	0/1:86:60,26:60:2139:26:928:-54.8555,0,-161.96	0/1:173:103,70:103:3672:70:2488:-164.138,0,-272.892	0/1:239:132,107:132:4709:107:3832:-259.593,0,-341.558	0/0:160:158,2:158:5611:2:68:0,-41.7071,-485.302	0/0:384:384,0:384:13661:0:0:0,-115.596,-1200.53	0/0:200:200,0:200:7102:0:0:0,-60.206,-624.573	0/1:57:26,31:26:910:31:1107:-78.7088,0,-62.419	0/1:367:169,198:169:6050:198:7076:-502.307,0,-422.488	0/1:85:49,36:49:1748:36:1273:-84.7034,0,-128.765	0/1:11:4,7:4:144:7:252:-18.9651,0,-9.77232	0/1:291:141,150:141:5001:150:5365:-380.661,0,-351.877	0/1:30:23,7:23:809:7:252:-13.0778,0,-62.5705	0/0:46:46,0:46:1643:0:0:0,-13.8474,-144.29	0/1:37:14,23:14:500:23:819:-60.0138,0,-33.2672	0/0:222:221,0:221:7850:0:0:0,-66.5276,-687.07	0/0:218:215,3:215:7633:3:108:0,-56.9609,-659.279	0/0:28:28,0:28:966:0:0:0,-8.42884,-85.5048	0/1:309:171,138:171:6112:138:4959:-335.571,0,-443.882	0/0:336:336,0:336:11991:0:0:0,-101.146,-1052.46	0/0:97:97,0:97:3419:0:0:0,-29.1999,-300.561	0/0:148:148,0:148:5275:0:0:0,-44.5524,-462.735	0/0:204:203,1:203:7243:1:36:0,-57.9556,-632.886	0/1:250:74,176:74:2652:176:6291:-468.74,0,-157.232	0/0:109:107,2:107:3747:2:72:0,-26.1989,-324.292	0/0:118:117,1:117:4166:1:36:0,-32.0408,-363.764	0/0:173:173,0:173:6167:0:0:0,-52.0782,-540.674	0/0:52:52,0:52:1838:0:0:0,-15.6536,-161.044	0/0:115:115,0:115:4083:0:0:0,-34.6184,-359.376	0/1:48:23,25:23:816:25:896:-63.7477,0,-58.0323	0/0:196:196,0:196:6919:0:0:0,-59.0019,-606.383	0/0:453:453,0:453:16185:0:0:0,-136.367,-1422.84	0/0:314:314,0:314:11122:0:0:0,-94.5234,-978.536	0/0:417:413,4:413:14708:4:144:0,-112.651,-1284.53	0/1:30:13,17:13:459:17:612:-44.4499,0,-31.2251	0/0:272:269,3:269:9572:3:108:0,-72.6008,-831.696	0/1:331:184,147:184:6551:147:5224:-354.896,0,-475.585	0/0:210:209,1:209:7412:1:36:0,-59.7618,-645.723	0/0:128:128,0:128:4508:0:0:0,-38.5318,-396.408	0/0:130:130,0:130:4624:0:0:0,-39.1339,-405.826	0/1:148:62,86:62:2194:86:3032:-217.692,0,-148.726	0/0:166:166,0:166:5882:0:0:0,-49.971,-516.588	0/0:59:59,0:59:2105:0:0:0,-17.7608,-186.018	0/1:115:66,49:66:2368:49:1750:-117.968,0,-174.188	0/0:105:105,0:105:3710:0:0:0,-31.6081,-328.027	0/1:205:97,108:97:3456:108:3848:-273.769,0,-241.22	0/1:263:114,149:114:4062:149:5292:-378.826,0,-277.494	0/1:89:32,57:32:1126:57:2044:-150.705,0,-72.4783	0/0:108:107,1:107:3786:1:36:0,-29.0567,-329.458	0/0:149:148,0:148:5222:0:0:0,-44.5524,-457.719
chr08	8842815	.	A	G	385164	PASS	AB=0.466105;ABP=72.9316;AC=152;AF=0.808511;AN=188;AO=14760;CIGAR=1X;DP=18525;DPB=18525;DPRA=0;EPP=32053.9;EPPR=8163.4;GTI=0;LEN=1;MEANALT=1.07447;MQM=49.557;MQMR=55.797;NS=94;NUMALT=1;ODDS=1.8625;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=518953;QR=134039;RO=3758;RPL=6833;RPP=179.087;RPPR=146.314;RPR=7927;RUN=1;SAF=6833;SAP=179.087;SAR=7927;SRF=1630;SRP=146.314;SRR=2128;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:99:0,99:0:0:99:3443:-304.609,-29.802,0	1/1:252:0,252:0:0:252:8880:-752.959,-75.8596,0	0/1:299:159,140:159:5667:140:4907:-338.027,0,-418.107	1/1:406:0,406:0:0:406:14209:-1259.72,-122.218,0	0/1:64:32,31:32:1137:31:1054:-72.9477,0,-82.8643	0/1:64:35,29:35:1248:29:1023:-66.9569,0,-92.6469	1/1:118:0,118:0:0:118:4153:-364.126,-35.5215,0	1/1:322:1,321:1:36:321:11342:-956.573,-93.3582,0	1/1:294:0,294:0:0:294:10292:-889.843,-88.5028,0	1/1:225:0,225:0:0:225:7945:-696.429,-67.7318,0	1/1:85:0,85:0:0:85:2989:-260.772,-25.5876,0	1/1:194:1,193:1:36:193:6731:-577.383,-54.8264,0	1/1:150:0,150:0:0:150:5293:-453.087,-45.1545,0	1/1:140:0,140:0:0:140:4895:-420.258,-42.1442,0	1/1:187:1,185:1:36:185:6473:-561.703,-52.7531,0	1/1:119:0,119:0:0:119:4204:-365.722,-35.8226,0	1/1:115:1,114:1:32:114:4054:-337.552,-31.4292,0	1/1:119:0,119:0:0:119:4211:-352.116,-35.8226,0	1/1:68:0,68:0:0:68:2410:-202.488,-20.47,0	1/1:462:0,462:0:0:462:16213:-1430.97,-139.076,0	1/1:400:0,400:0:0:400:13976:-1211.67,-120.412,0	0/1:172:111,61:111:3952:61:2101:-134.88,0,-303.915	1/1:240:1,239:1:36:239:8366:-738.284,-68.6489,0	0/1:132:59,73:59:2084:73:2583:-185.054,0,-147.632	1/1:170:0,170:0:0:170:5948:-519.686,-51.1751,0	0/1:647:351,296:351:12493:296:10396:-720.812,0,-926.94	0/1:734:349,385:349:12481:385:13522:-953.267,0,-898.89	1/1:85:0,85:0:0:85:2997:-260.484,-25.5876,0	1/1:671:0,671:0:0:671:23683:-2094.71,-201.991,0	1/1:177:4,173:4:144:173:6055:-515.589,-39.9828,0	0/1:231:113,118:113:4011:118:4158:-294.136,0,-290.33	0/1:11:4,7:4:140:7:237:-17.4159,0,-9.62757	1/1:24:0,24:0:0:24:856:-72.0411,-7.22472,0	0/1:10:5,5:5:180:5:172:-12.1598,0,-13.5418	1/1:15:0,15:0:0:15:531:-46.7873,-4.51545,0	1/1:8:0,8:0:0:8:284:-24.7792,-2.40824,0	1/1:411:1,410:1:36:410:14491:-1267.05,-120.125,0	0/1:311:178,133:178:6363:133:4657:-310.808,0,-476.505	0/1:100:52,48:52:1859:48:1682:-113.085,0,-136.122	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:269:123,146:123:4385:146:5153:-369.728,0,-313.333	0/1:52:29,23:29:1040:23:800:-53.3224,0,-77.1457	0/1:310:158,151:158:5620:151:5337:-371.627,0,-411.669	0/1:166:95,71:95:3395:71:2492:-166.669,0,-254.943	1/1:124:0,124:0:0:124:4330:-378.25,-37.3277,0	0/1:165:78,87:78:2799:87:3080:-224.339,0,-202.388	0/1:246:136,110:136:4865:110:3880:-255.809,0,-362.54	0/1:297:126,170:126:4472:170:5931:-435.605,0,-312.366	1/1:224:1,223:1:36:223:7810:-682.662,-63.8324,0	1/1:277:0,277:0:0:277:9776:-854.781,-83.3853,0	1/1:301:1,299:1:36:299:10482:-927.477,-87.0706,0	0/1:11:6,5:6:216:5:180:-12.5267,0,-16.4238	0/1:298:153,144:153:5450:144:5036:-346.729,0,-399.621	0/1:102:65,37:65:2321:37:1287:-84.7703,0,-178.368	0/1:11:3,8:3:108:8:284:-20.5951,0,-6.76384	0/1:298:163,135:163:5820:135:4773:-330.057,0,-432.24	0/1:97:61,36:61:2184:36:1262:-82.4912,0,-167.309	1/1:6:0,6:0:0:6:216:-19.5749,-1.80618,0	0/1:23:17,6:17:612:6:216:-12.4357,0,-48.2305	1/1:165:0,165:0:0:165:5784:-501.746,-49.67,0	1/1:175:2,173:2:57:173:6063:-524.718,-47.2669,0	1/1:14:0,14:0:0:14:491:-42.2908,-4.21442,0	0/1:392:209,183:209:7487:183:6473:-454.922,0,-554.837	1/1:306:1,305:1:36:305:10782:-941.01,-88.5321,0	1/1:128:0,128:0:0:128:4476:-389.685,-38.5318,0	1/1:170:0,170:0:0:170:5976:-527.7,-51.1751,0	1/1:343:2,341:2:72:341:12059:-1052.83,-96.4166,0	0/1:328:235,93:235:8377:93:3270:-190.607,0,-653.814	1/1:43:0,43:0:0:43:1505:-132.291,-12.9443,0	1/1:142:1,141:1:36:141:4909:-414.793,-39.148,0	1/1:148:0,148:0:0:148:5221:-458.895,-44.5524,0	1/1:34:0,34:0:0:34:1194:-104.129,-10.235,0	1/1:130:0,130:0:0:130:4515:-395.241,-39.1339,0	0/1:200:86,114:86:3057:114:4000:-285.928,0,-214.57	1/1:387:1,386:1:36:386:13517:-1164,-112.916,0	1/1:389:0,389:0:0:389:13790:-1214.87,-117.101,0	1/1:144:0,144:0:0:144:5043:-429.328,-43.3483,0	1/1:280:1,279:1:36:279:9833:-827.844,-80.6901,0	0/1:10:3,7:3:104:7:252:-18.409,0,-6.63673	1/1:278:0,277:0:0:277:9765:-851.63,-83.3853,0	0/1:259:145,114:145:5168:114:3970:-266.475,0,-385.303	1/1:446:0,446:0:0:446:15728:-1378.49,-134.259,0	1/1:152:0,152:0:0:152:5309:-459.468,-45.7566,0	1/1:125:0,125:0:0:125:4429:-388.994,-37.6288,0	0/1:189:111,78:111:3958:78:2766:-179.914,0,-298.409	1/1:311:0,311:0:0:311:10988:-957.974,-93.6203,0	1/1:65:0,65:0:0:65:2306:-191.899,-19.567,0	0/1:146:82,64:82:2920:64:2256:-146.466,0,-216.847	1/1:132:0,132:0:0:132:4606:-393.982,-39.736,0	0/1:68:32,36:32:1148:36:1267:-87.7607,0,-82.8985	0/1:140:65,75:65:2309:75:2629:-183.288,0,-164.712	0/1:155:108,47:108:3872:47:1645:-95.1101,0,-301.347	1/1:278:1,277:1:36:277:9767:-860.739,-80.0881,0	1/1:237:0,237:0:0:237:8340:-726.856,-71.3441,0
chr08	9347510	.	GTGATAGA	CTGACAGG,CGGATAGG	132504	PASS	AB=0.607143,0.382239;ABP=209.61,252.587;AC=153,35;AF=0.81383,0.18617;AN=188;AO=5435,802;CIGAR=1X3M1X2M1X,2X5M1X;DP=6318;DPB=6317.88;DPRA=0,1.01754;EPP=11805,1744.53;EPPR=5.18177;GTI=4;LEN=8,8;MEANALT=2.15957,2.82051;MQM=59.4263,59.5349;MQMR=60;NS=94;NUMALT=2;ODDS=1.96651;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=189880,27768;QR=36;RO=1;RPL=0,0;RPP=11805,1744.53;RPPR=5.18177;RPR=5435,802;RUN=1,1;SAF=0,0;SAP=11805,1744.53;SAR=5435,802;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:39:0,39,0:0:0:39,0:1360,0:-122.502,-11.7402,0,-122.502,-11.7402,-122.502	1/1:52:0,52,0:0:0:52,0:1838,0:-165.028,-15.6536,0,-165.028,-15.6536,-165.028	1/2:101:0,51,50:0:0:51,50:1793,1741:-287.852,-141.913,-126.56,-146.289,0,-131.237	1/1:144:0,143,0:0:0:143,0:5034,0:-452.838,-43.0473,0,-452.838,-43.0473,-452.838	1/2:25:0,15,9:0:0:15,9:525,306:-67.5133,-24.7937,-20.2783,-42.7058,0,-39.9965	1/2:13:0,9,4:0:0:9,4:311,142:-37.1883,-11.9251,-9.21582,-25.6152,0,-24.411	1/1:69:0,68,0:0:0:68,0:2398,0:-215.698,-20.47,0,-215.698,-20.47,-215.698	1/1:76:0,76,0:0:0:76,0:2639,0:-236.995,-22.8783,0,-236.995,-22.8783,-236.995	1/1:65:0,64,0:0:0:64,0:2238,0:-201.399,-19.2659,0,-201.399,-19.2659,-201.399	1/1:57:0,56,0:0:0:56,0:1949,0:-175.275,-16.8577,0,-175.275,-16.8577,-175.275	1/1:35:0,35,0:0:0:35,0:1228,0:-110.821,-10.5361,0,-110.821,-10.5361,-110.821	1/1:88:0,85,0:0:0:85,0:2960,0:-266.241,-25.5876,0,-266.241,-25.5876,-266.241	1/1:98:0,98,0:0:0:98,0:3442,0:-309.929,-29.5009,0,-309.929,-29.5009,-309.929	1/1:41:0,40,0:0:0:40,0:1397,0:-125.695,-12.0412,0,-125.695,-12.0412,-125.695	1/1:64:0,64,0:0:0:64,0:2220,0:-200.06,-19.2659,0,-200.06,-19.2659,-200.06	1/1:44:0,44,0:0:0:44,0:1542,0:-139.071,-13.2453,0,-139.071,-13.2453,-139.071	1/1:23:0,23,0:0:0:23,0:807,0:-72.9505,-6.92369,0,-72.9505,-6.92369,-72.9505	1/1:23:0,23,0:0:0:23,0:801,0:-72.4013,-6.92369,0,-72.4013,-6.92369,-72.4013	1/1:21:0,21,0:0:0:21,0:729,0:-65.9277,-6.32163,0,-65.9277,-6.32163,-65.9277	1/1:148:0,144,0:0:0:144,0:5050,0:-454.197,-43.3483,0,-454.197,-43.3483,-454.197	1/1:124:0,123,0:0:0:123,0:4297,0:-386.45,-37.0267,0,-386.45,-37.0267,-386.45	1/2:122:0,54,66:0:0:54,66:1887,2241:-335.299,-181.816,-165.56,-153.565,0,-133.697	1/1:100:0,91,1:0:0:91,1:3185,36:-286.501,-27.3937,0,-283.563,-24.4536,-283.262	1/2:47:0,42,5:0:0:42,5:1453,171:-132.268,-14.2208,-1.57751,-118.39,0,-116.885	1/1:35:0,34,0:0:0:34,0:1191,0:-107.066,-10.235,0,-107.066,-10.235,-107.066	1/2:133:0,83,50:0:0:83,50:2894,1755:-378.533,-143.177,-118.191,-235.706,0,-220.655	1/2:127:0,87,39:0:0:87,39:3073,1354:-360.284,-110.045,-83.8557,-250.229,0,-238.488	1/1:30:0,30,0:0:0:30,0:1025,0:-92.4435,-9.0309,0,-92.4435,-9.0309,-92.4435	1/1:219:0,215,0:0:0:215,0:7532,0:-677.415,-64.7215,0,-677.415,-64.7215,-677.415	1/1:63:0,63,0:0:0:63,0:2198,0:-198.031,-18.9649,0,-198.031,-18.9649,-198.031	1/2:29:0,15,14:0:0:15,14:531,498:-84.1917,-40.9411,-36.4257,-43.6053,0,-39.3909	1/2:7:0,3,4:0:0:3,4:107,140:-20.464,-11.7386,-10.8355,-9.07908,0,-7.87496	1/1:13:0,13,0:0:0:13,0:459,0:-41.6449,-3.91339,0,-41.6449,-3.91339,-41.6449	1/2:11:0,6,5:0:0:6,5:212,171:-31.4879,-14.2203,-12.4141,-17.6146,0,-16.1094	1/1:4:0,4,0:0:0:4,0:136,0:-12.5752,-1.20412,0,-12.5752,-1.20412,-12.5752	1/1:15:0,14,0:0:0:14,0:496,0:-44.6156,-4.21442,0,-44.6156,-4.21442,-44.6156	1/1:154:0,152,0:0:0:152,0:5312,0:-477.869,-45.7566,0,-477.869,-45.7566,-477.869	1/2:81:0,49,31:0:0:49,31:1707,1101:-228.483,-89.6944,-74.9439,-138.782,0,-129.45	1/2:19:0,14,5:0:0:14,5:497,170:-54.6345,-14.1275,-9.91308,-40.8508,0,-39.3456	1/1:5:0,5,0:0:0:5,0:174,0:-16.0013,-1.50515,0,-16.0013,-1.50515,-16.0013	1/2:87:0,46,37:0:0:46,37:1603,1313:-237.332,-107.022,-93.1744,-130.353,0,-119.215	1/2:23:1,13,9:1:36:13,9:466,306:-59.4627,-21.7542,-20.7804,-35.0589,0,-35.2871	1/2:101:0,59,41:0:0:59,41:2063,1368:-278.524,-110.698,-92.9369,-167.807,0,-155.465	1/2:42:0,20,20:0:0:20,20:683,696:-112.105,-56.6788,-50.6582,-55.5163,0,-49.4957	1/1:46:0,46,0:0:0:46,0:1596,0:-143.921,-13.8474,0,-143.921,-13.8474,-143.921	1/2:55:0,33,22:0:0:33,22:1149,771:-156.481,-63.0857,-53.1517,-93.7448,0,-87.1221	1/2:71:0,47,22:0:0:47,22:1657,716:-192.773,-57.8353,-43.6869,-134.995,0,-128.372	1/2:124:0,87,37:0:0:87,37:3052,1307:-355.154,-106.789,-80.5998,-248.717,0,-237.579	1/1:224:0,218,2:0:0:218,2:7640,60:-687.006,-65.6245,0,-682.21,-60.845,-681.608	1/1:68:0,68,0:0:0:68,0:2403,0:-216.333,-20.47,0,-216.333,-20.47,-216.333	1/1:98:0,97,0:0:0:97,0:3398,0:-305.706,-29.1999,0,-305.706,-29.1999,-305.706	1/2:8:0,7,1:0:0:7,1:247,36:-23.4042,-3.29724,-1.19003,-20.4659,0,-20.1648	1/2:93:0,60,33:0:0:60,33:2110,1136:-264.225,-92.5969,-74.5351,-171.975,0,-162.041	1/2:31:0,20,10:0:0:20,10:716,351:-87.0568,-28.6586,-22.638,-58.491,0,-55.4807	1/1:6:0,6,0:0:0:6,0:209,0:-19.1507,-1.80618,0,-19.1507,-1.80618,-19.1507	1/2:97:0,68,27:0:0:68,27:2329,929:-264.496,-75.4592,-54.9892,-189.054,0,-180.927	1/2:28:0,16,12:0:0:16,12:558,423:-80.1741,-34.7934,-29.9769,-45.7315,0,-42.1191	1/1:5:0,5,0:0:0:5,0:173,0:-15.9084,-1.50515,0,-15.9084,-1.50515,-15.9084	1/2:15:0,13,2:0:0:13,2:464,72:-44.0575,-6.23466,-2.32127,-38.1823,0,-37.5802	1/1:74:0,70,0:0:0:70,0:2468,0:-222.062,-21.0721,0,-222.062,-21.0721,-222.062	1/1:99:0,99,0:0:0:99,0:3476,0:-313.052,-29.802,0,-313.052,-29.802,-313.052	1/1:6:0,6,0:0:0:6,0:212,0:-19.4232,-1.80618,0,-19.4232,-1.80618,-19.4232	1/2:145:0,96,47:0:0:96,47:3353,1637:-405.912,-133.173,-104.274,-272.795,0,-258.647	1/1:107:0,106,1:0:0:106,1:3666,36:-329.215,-31.9092,0,-326.277,-28.6119,-325.976	1/1:36:0,34,0:0:0:34,0:1182,0:-106.305,-10.235,0,-106.305,-10.235,-106.305	1/1:70:0,69,0:0:0:69,0:2387,0:-214.728,-20.7711,0,-214.728,-20.7711,-214.728	1/1:145:0,136,6:0:0:136,6:4774,212:-429.452,-40.9401,0,-412.214,-23.6543,-410.408	1/2:68:0,28,40:0:0:28,40:967,1385:-191.434,-112.897,-104.469,-78.8821,0,-66.8409	1/1:27:0,26,0:0:0:26,0:879,0:-79.0527,-7.82678,0,-79.0527,-7.82678,-79.0527	1/1:59:0,59,0:0:0:59,0:2060,0:-185.388,-17.7608,0,-185.388,-17.7608,-185.388	1/1:28:0,28,0:0:0:28,0:988,0:-89.2328,-8.42884,0,-89.2328,-8.42884,-89.2328	1/1:13:0,13,0:0:0:13,0:454,0:-41.1855,-3.91339,0,-41.1855,-3.91339,-41.1855	1/1:124:0,123,0:0:0:123,0:4279,0:-384.844,-37.0267,0,-384.844,-37.0267,-384.844	1/2:77:0,63,14:0:0:63,14:2226,500:-222.346,-41.0763,-22.1114,-181.626,0,-177.412	1/1:89:0,88,0:0:0:88,0:3052,0:-274.475,-26.4906,0,-274.475,-26.4906,-274.475	1/1:129:0,128,0:0:0:128,0:4473,0:-402.392,-38.5318,0,-402.392,-38.5318,-402.392	1/1:68:0,67,0:0:0:67,0:2315,0:-208.319,-20.169,0,-208.319,-20.169,-208.319	1/1:40:0,40,0:0:0:40,0:1407,0:-126.908,-12.0412,0,-126.908,-12.0412,-126.908	1/2:4:0,1,3:0:0:1,3:36,104:-11.7405,-8.79971,-8.49868,-3.29724,0,-2.39415	1/1:129:0,129,0:0:0:129,0:4507,0:-405.736,-38.8329,0,-405.736,-38.8329,-405.736	1/2:57:0,30,27:0:0:30,27:1049,938:-161.894,-76.591,-67.5601,-85.6512,0,-77.5233	1/1:240:0,235,0:0:0:235,0:8152,0:-732.746,-70.7421,0,-732.746,-70.7421,-732.746	1/1:47:0,46,0:0:0:46,0:1615,0:-145.311,-13.8474,0,-145.311,-13.8474,-145.311	1/1:51:0,51,0:0:0:51,0:1766,0:-159.205,-15.3525,0,-159.205,-15.3525,-159.205	1/2:33:0,18,15:0:0:18,15:630,512:-93.1433,-41.8854,-36.4669,-51.6029,0,-47.0875	1/1:84:0,84,0:0:0:84,0:2972,0:-267.624,-25.2865,0,-267.624,-25.2865,-267.624	1/1:18:0,18,0:0:0:18,0:616,0:-55.7514,-5.41854,0,-55.7514,-5.41854,-55.7514	1/2:53:0,31,20:0:0:31,20:1056,689:-141.665,-56.0003,-46.6684,-85.6984,0,-79.6778	1/1:55:0,53,0:0:0:53,0:1849,0:-166.362,-15.9546,0,-166.362,-15.9546,-166.362	1/2:15:0,12,3:0:0:12,3:417,103:-42.6089,-8.70651,-5.09415,-34.2464,0,-33.3433	1/2:64:0,40,24:0:0:40,24:1406,812:-180.58,-66.1312,-54.09,-114.792,0,-107.567	1/2:66:0,22,44:0:0:22,44:764,1530:-186.846,-124.744,-118.121,-62.4492,0,-49.2039	1/1:136:0,134,0:0:0:134,0:4662,0:-419.418,-40.338,0,-419.418,-40.338,-419.418	1/1:76:0,76,0:0:0:76,0:2622,0:-236.211,-22.8783,0,-236.211,-22.8783,-236.211
chr08	9369544	.	C	G	36735.9	PASS	AB=0.479063;ABP=29.0158;AC=36;AF=0.191489;AN=188;AO=3319;CIGAR=1X;DP=18394;DPB=18394;DPRA=1.18819;EPP=7201.44;EPPR=32692.4;GTI=0;LEN=1;MEANALT=1.06122;MQM=26.2058;MQMR=31.701;NS=94;NUMALT=1;ODDS=2.24894;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118005;QR=536953;RO=15066;RPL=1555;RPP=31.5888;RPPR=114.625;RPR=1764;RUN=1;SAF=1554;SAP=32.1384;SAR=1765;SRF=7090;SRP=116.152;SRR=7976;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:93:93,0:93:3312:0:0:0,-27.9958,-178.511	0/0:361:361,0:361:12878:0:0:0,-108.672,-684.633	0/1:277:148,129:148:5296:129:4610:-232.237,0,-209.121	0/0:344:344,0:344:12218:0:0:0,-103.554,-889.306	0/1:166:83,83:83:2953:83:2924:-121.187,0,-145.012	0/1:112:65,47:65:2324:47:1672:-76.7388,0,-96.3527	0/0:249:248,0:248:8846:0:0:0,-74.6554,-664.851	0/0:350:349,1:349:12412:1:36:0,-103.765,-659.484	0/0:202:202,0:202:7231:0:0:0,-60.8081,-382.952	0/0:310:310,0:310:11070:0:0:0,-93.3193,-779.791	0/0:121:120,0:120:4296:0:0:0,-36.1236,-277.402	0/0:174:174,0:174:6198:0:0:0,-52.3792,-334.17	0/0:172:172,0:172:6148:0:0:0,-51.7772,-329.022	0/0:175:175,0:175:6230:0:0:0,-52.6802,-409.923	0/0:130:130,0:130:4637:0:0:0,-39.1339,-336.883	0/0:175:175,0:175:6219:0:0:0,-52.6802,-383.54	0/0:122:122,0:122:4320:0:0:0,-36.7257,-231.476	0/0:95:95,0:95:3388:0:0:0,-28.5978,-184.496	0/0:71:70,0:70:2512:0:0:0,-21.0721,-133.562	0/0:377:377,0:377:13396:0:0:0,-113.488,-990.897	0/0:268:266,2:266:9448:2:72:0,-75.1608,-643.784	0/1:185:64,121:64:2287:121:4304:-188.238,0,-71.1267	0/0:245:245,0:245:8732:0:0:0,-73.7523,-643.861	0/1:255:145,110:145:5125:110:3865:-171.07,0,-277.608	0/0:189:189,0:189:6710:0:0:0,-56.8947,-432.774	0/1:572:312,260:312:11097:260:9230:-396.472,0,-410.167	0/1:490:267,223:267:9539:223:7935:-271.717,0,-480.565	0/0:49:49,0:49:1752:0:0:0,-14.7505,-118.65	0/0:505:502,2:502:17928:2:72:0,-148.847,-957.882	0/0:306:286,20:286:10160:20:716:0,-42.2243,-670.202	0/1:262:149,113:149:5313:113:4018:-148.026,0,-316.851	0/1:12:3,9:3:108:9:320:-17.9244,0,-1.85195	0/0:32:32,0:32:1140:0:0:0,-9.63296,-64.1668	0/1:15:9,6:9:324:6:208:-7.92107,0,-11.0057	0/0:17:17,0:17:608:0:0:0,-5.11751,-31.4529	0/0:41:40,1:40:1420:1:36:0,-10.7464,-73.025	0/0:370:370,0:370:13206:0:0:0,-111.381,-712.266	0/1:304:158,146:158:5604:146:5201:-240.631,0,-287.767	0/1:110:61,49:61:2157:49:1748:-64.2782,0,-80.6499	0/0:6:6,0:6:216:0:0:0,-1.80618,-15.482	0/1:233:131,102:131:4696:102:3617:-145.598,0,-239.428	0/1:81:47,34:47:1671:34:1216:-41.9551,0,-81.8051	0/1:244:116,128:116:4138:128:4565:-182.965,0,-228.637	0/1:148:66,82:66:2325:82:2927:-117.044,0,-117.089	0/0:130:130,0:130:4647:0:0:0,-39.1339,-325.636	0/1:156:77,79:77:2756:79:2824:-86.8171,0,-103.083	0/1:288:163,125:163:5823:125:4464:-199.525,0,-228.866	0/1:310:156,154:156:5570:154:5469:-244.905,0,-308.094	0/0:228:228,0:228:8117:0:0:0,-68.6348,-600.512	0/0:268:268,0:268:9577:0:0:0,-80.676,-698.938	0/0:211:211,0:211:7560:0:0:0,-63.5173,-391.256	0/1:23:8,15:8:284:15:524:-27.4849,0,-11.6719	0/1:196:103,93:103:3688:93:3315:-156.357,0,-138.328	0/1:83:48,35:48:1716:35:1252:-42.7979,0,-69.8894	0/1:34:23,11:23:820:11:396:-7.53507,0,-35.4768	0/1:304:146,156:146:5189:156:5495:-230.704,0,-289.131	0/1:89:53,36:53:1891:36:1280:-25.3116,0,-106.123	0/0:18:18,0:18:644:0:0:0,-5.41854,-34.2202	0/1:32:18,14:18:648:14:500:-18.776,0,-26.6458	0/0:181:180,1:180:6433:1:36:0,-52.9898,-408.86	0/0:185:184,1:184:6540:1:36:0,-54.1939,-461.412	0/0:17:17,0:17:604:0:0:0,-5.11751,-38.5511	0/1:310:176,134:176:6277:134:4812:-195.765,0,-251.235	0/0:345:345,0:345:12257:0:0:0,-103.855,-873.657	0/0:207:207,0:207:7385:0:0:0,-62.3132,-478.919	0/0:207:207,0:207:7350:0:0:0,-62.3132,-535.67	0/0:350:343,7:343:12236:7:252:0,-90.0119,-868.205	0/1:288:102,186:102:3634:186:6624:-235.217,0,-181.495	0/0:106:106,0:106:3783:0:0:0,-31.9092,-229.365	0/0:178:177,1:177:6327:1:36:0,-51.9876,-335.163	0/0:130:129,0:129:4580:0:0:0,-38.8329,-249.245	0/0:69:69,0:69:2475:0:0:0,-20.7711,-179.705	0/0:181:181,0:181:6459:0:0:0,-54.4864,-354.678	0/1:201:99,102:99:3513:102:3634:-169.636,0,-125.688	0/0:337:337,0:337:11971:0:0:0,-101.447,-767.851	0/0:284:283,0:283:10119:0:0:0,-85.1915,-750.231	0/0:235:235,0:235:8412:0:0:0,-70.742,-439.297	0/0:305:299,6:299:10662:6:216:0,-74.6495,-553.283	0/1:23:18,5:18:648:5:180:-5.9438,0,-27.3185	0/0:253:250,3:250:8927:3:104:0,-70.6622,-640.583	0/1:249:150,99:150:5354:99:3496:-160.571,0,-213.777	0/0:363:362,1:362:12931:1:36:0,-107.091,-950.449	0/0:154:154,0:154:5485:0:0:0,-46.3586,-403.084	0/0:158:158,0:158:5627:0:0:0,-47.5627,-413.661	0/1:132:69,63:69:2455:63:2230:-102.033,0,-146.511	0/0:260:259,1:259:9221:1:36:0,-75.365,-646.405	0/0:59:59,0:59:2112:0:0:0,-17.7608,-115.474	0/1:157:81,76:81:2892:76:2705:-120.64,0,-104.56	0/0:130:130,0:130:4621:0:0:0,-39.1339,-254.393	0/1:114:72,42:72:2549:42:1491:-36.8935,0,-123.511	0/1:245:116,129:116:4138:129:4585:-127.166,0,-188.971	0/1:130:54,76:54:1919:76:2685:-107.878,0,-94.337	0/0:271:270,0:270:9562:0:0:0,-81.2781,-701.972	0/0:195:195,0:195:6977:0:0:0,-58.7008,-489.107
chr08	9588950	.	TAT	GAA,TAA	446702	PASS	AB=0.472732,0.524397;ABP=25.5103,21.0228;AC=166,22;AF=0.882979,0.117021;AN=188;AO=14409,1877;CIGAR=1X1M1X,2M1X;DP=16317;DPB=16318;DPRA=0,1.16515;EPP=31291.8,4078.86;EPPR=7.35324;GTI=0;LEN=3,1;MEANALT=1.75532,2.30233;MQM=51.7543,59.8082;MQMR=60;NS=94;NUMALT=2;ODDS=12.4715;PAIRED=0,0;PAIREDR=0;PAO=2,1;PQA=54,18;PQR=0;PRO=0;QA=502265,66968;QR=72;RO=2;RPL=6701,876;RPP=155.83,21.0866;RPPR=3.0103;RPR=7708,1001;RUN=1,1;SAF=6701,876;SAP=155.83,21.0866;SAR=7708,1001;SRF=1;SRP=3.0103;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:105:0,105,0:0:0:105,0:3634,0:-325.621,-31.6082,0,-325.621,-31.6082,-325.621	1/1:187:0,187,0:0:0:187,0:6519,0:-580.631,-56.2926,0,-580.631,-56.2926,-580.631	1/1:157:0,157,0:0:0:157,0:5453,0:-486.191,-47.2617,0,-486.191,-47.2617,-486.191	1/1:308:0,306,0:0:0:306,0:10682,0:-955.433,-92.1152,0,-955.433,-92.1152,-955.433	1/1:139:0,138,0:0:0:138,0:4808,0:-428.49,-41.5421,0,-428.49,-41.5421,-428.49	1/1:113:0,113,0:0:0:113,0:3936,0:-352.277,-34.0164,0,-352.277,-34.0164,-352.277	1/1:236:0,236,0:0:0:236,0:8213,0:-730.762,-71.0431,0,-730.762,-71.0431,-730.762	1/1:330:0,328,2:0:0:328,2:11422,72:-1019.6,-98.7378,0,-1013.74,-92.5118,-1013.13	1/1:269:0,266,3:0:0:266,3:9217,108:-821.157,-80.074,0,-812.345,-70.9019,-811.441	1/1:209:0,209,0:0:0:209,0:7236,0:-644.492,-62.9153,0,-644.492,-62.9153,-644.492	1/1:153:0,152,0:0:0:152,0:5253,0:-468.547,-45.7566,0,-468.547,-45.7566,-468.547	1/1:199:1,198,0:1:36:198,0:6864,0:-610.339,-56.3067,0,-610.64,-59.6039,-613.577	1/1:181:0,180,0:0:0:180,0:6274,0:-559.721,-54.1854,0,-559.721,-54.1854,-559.721	1/1:176:0,175,1:0:0:175,1:6031,36:-537.249,-52.6803,0,-534.316,-49.3881,-534.015	1/1:162:0,160,0:0:0:160,0:5584,0:-497.52,-48.1648,0,-497.52,-48.1648,-497.52	1/1:143:0,142,0:0:0:142,0:4967,0:-443.994,-42.7463,0,-443.994,-42.7463,-443.994	1/1:141:0,141,0:0:0:141,0:4922,0:-438.438,-42.4452,0,-438.438,-42.4452,-438.438	1/1:115:0,115,0:0:0:115,0:4034,0:-360.034,-34.6185,0,-360.034,-34.6185,-360.034	1/1:89:0,89,0:0:0:89,0:3115,0:-278.493,-26.7917,0,-278.493,-26.7917,-278.493	1/1:338:0,338,0:0:0:338,0:11802,0:-1051.52,-101.748,0,-1051.52,-101.748,-1051.52	1/1:315:0,314,0:0:0:314,0:10950,0:-979.55,-94.5234,0,-979.55,-94.5234,-979.55	1/1:76:0,75,1:0:0:75,1:2614,36:-235.105,-22.5773,0,-232.171,-19.2837,-231.87	1/1:243:0,242,1:0:0:242,1:8471,36:-754.989,-72.8493,0,-752.054,-69.5546,-751.753	1/2:233:0,142,91:0:0:142,91:4970,3252:-665.493,-265.505,-222.758,-400.341,0,-372.947	1/1:179:0,178,1:0:0:178,1:6234,36:-555.977,-53.5833,0,-553.048,-50.2951,-552.747	1/2:367:0,118,249:0:0:118,249:4087,8882:-1055.79,-724.379,-688.857,-331.763,0,-256.807	1/1:437:0,434,3:0:0:434,3:15009,100:-1341.97,-130.647,0,-1333.88,-122.22,-1332.97	1/2:72:0,30,42:0:0:30,42:1049,1496:-206.88,-122.285,-113.254,-84.9448,0,-72.3015	1/1:262:0,261,0:0:0:261,0:9197,0:-826.757,-78.5688,0,-826.757,-78.5688,-826.757	1/1:265:0,255,9:0:0:255,9:8954,324:-796.159,-76.7627,0,-769.73,-50.3341,-767.021	1/2:210:0,108,102:0:0:108,102:3770,3653:-601.182,-298.265,-265.754,-303.268,0,-272.563	1/2:23:0,11,12:0:0:11,12:388,428:-66.5675,-35.2464,-31.9351,-31.674,0,-28.0617	1/1:38:0,38,0:0:0:38,0:1322,0:-119.084,-11.4391,0,-119.084,-11.4391,-119.084	1/2:16:0,12,4:0:0:12,4:413,144:-45.449,-12.1095,-8.49714,-33.695,0,-32.4909	1/1:33:0,33,0:0:0:33,0:1145,0:-103,-9.93399,0,-103,-9.93399,-103	1/2:23:0,13,10:0:0:13,10:448,356:-65.6836,-29.3709,-25.4576,-36.6633,0,-33.653	1/1:218:0,218,0:0:0:218,0:7629,0:-686.183,-65.6245,0,-686.183,-65.6245,-686.183	1/1:229:0,228,1:0:0:228,1:7896,36:-702.485,-68.6348,0,-699.738,-65.5483,-699.437	1/1:121:0,120,1:0:0:120,1:4176,21:-373.029,-36.1236,0,-371.442,-34.325,-371.141	1/1:7:0,7,0:0:0:7,0:248,0:-22.4692,-2.10721,0,-22.4692,-2.10721,-22.4692	1/2:193:0,81,112:0:0:81,112:2842,4021:-558.044,-328.352,-303.968,-230.045,0,-196.329	1/2:64:0,29,34:0:0:29,34:1027,1211:-181.756,-98.7008,-89.9709,-83.0494,0,-72.8144	1/1:277:0,277,0:0:0:277,0:9674,0:-863.707,-83.3853,0,-863.707,-83.3853,-863.707	1/1:197:0,196,1:0:0:196,1:6862,36:-611.364,-59.0019,0,-608.426,-55.7046,-608.125	1/1:189:0,189,0:0:0:189,0:6516,0:-580.955,-56.8947,0,-580.955,-56.8947,-580.955	1/1:122:0,122,0:0:0:122,0:4273,0:-383.377,-36.7257,0,-383.377,-36.7257,-383.377	1/1:252:0,251,1:0:0:251,1:8781,36:-784.429,-75.5585,0,-781.499,-72.2703,-781.198	1/2:253:0,141,112:0:0:141,112:4884,4001:-720.112,-326.561,-284.115,-393.902,0,-360.187	1/1:212:0,211,1:0:0:211,1:7352,36:-655.717,-63.5173,0,-652.781,-60.2227,-652.48	1/1:256:0,256,0:0:0:256,0:8919,0:-794.053,-77.0637,0,-794.053,-77.0637,-794.053	1/1:162:0,162,0:0:0:162,0:5615,0:-505.026,-48.7669,0,-505.026,-48.7669,-505.026	1/1:15:0,15,0:0:0:15,0:516,0:-46.5361,-4.51545,0,-46.5361,-4.51545,-46.5361	1/2:195:0,84,110:0:0:84,110:2958,3926:-558.593,-320.063,-294.777,-238.526,0,-205.413	1/1:59:0,59,0:0:0:59,0:2044,0:-184.053,-17.7608,0,-184.053,-17.7608,-184.053	1/2:36:0,20,16:0:0:20,16:677,568:-101.147,-46.635,-40.6144,-54.8586,0,-50.0421	1/2:217:0,100,114:0:0:100,114:3522,4088:-617.641,-3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chr08	9588990	.	G	A	199170	PASS	AB=0.518877;ABP=9.4049;AC=166;AF=0.882979;AN=188;AO=9123;CIGAR=1X;DP=10128;DPB=10128;DPRA=0;EPP=19813.4;EPPR=2181;GTI=2;LEN=1;MEANALT=1.02128;MQM=45.8567;MQMR=59.7996;NS=94;NUMALT=1;ODDS=0.113674;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=325255;QR=35720;RO=1003;RPL=9123;RPP=19813.4;RPPR=2181;RPR=0;RUN=1;SAF=0;SAP=19813.4;SAR=9123;SRF=0;SRP=2181;SRR=1003;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:44:0,44:0:0:44:1551:-137.597,-13.2453,0	1/1:137:0,137:0:0:137:4870:-431.516,-41.2411,0	1/1:80:0,80:0:0:80:2850:-251.725,-24.0824,0	1/1:123:0,123:0:0:123:4376:-387.916,-37.0267,0	1/1:86:0,86:0:0:86:3051:-270.321,-25.8886,0	1/1:64:0,64:0:0:64:2268:-202.205,-19.2659,0	1/1:126:0,126:0:0:126:4481:-394.131,-37.9298,0	1/1:224:0,224:0:0:224:7973:-708.153,-67.4307,0	1/1:133:0,133:0:0:133:4732:-417.944,-40.037,0	1/1:138:0,138:0:0:138:4936:-436.581,-41.5421,0	1/1:95:0,95:0:0:95:3408:-301.513,-28.5979,0	1/1:83:1,82:1:36:82:2928:-255.026,-21.3872,0	1/1:106:0,106:0:0:106:3804:-337.45,-31.9092,0	1/1:132:0,132:0:0:132:4724:-418.331,-39.736,0	1/1:89:0,89:0:0:89:3198:-282.375,-26.7917,0	1/1:73:0,73:0:0:73:2620:-232.385,-21.9752,0	1/1:115:0,115:0:0:115:4136:-366.683,-34.6185,0	1/1:90:0,90:0:0:90:3232:-287.245,-27.0927,0	1/1:55:0,55:0:0:55:1976:-175.557,-16.5567,0	1/1:181:0,180:0:0:180:6411:-565.177,-54.1854,0	1/1:128:0,128:0:0:128:4512:-400.825,-38.5318,0	1/1:114:0,114:0:0:114:4074:-364.8,-34.3174,0	1/1:122:0,122:0:0:122:4364:-385.052,-36.7257,0	0/1:151:57,94:57:2017:94:3352:-251.667,0,-136.346	1/1:89:0,89:0:0:89:3179:-281.585,-26.7917,0	0/1:344:164,180:164:5839:180:6388:-468.642,0,-422.051	1/1:190:0,190:0:0:190:6762:-598.574,-57.1957,0	0/1:41:23,18:23:824:18:648:-45.4986,0,-62.1319	1/1:146:0,146:0:0:146:5196:-465.272,-43.9504,0	1/1:168:4,164:4:144:164:5857:-504.658,-37.2594,0	0/1:102:53,49:53:1892:49:1752:-123.561,0,-139.851	0/1:11:4,7:4:140:7:252:-19.4447,0,-9.63325	1/1:5:0,5:0:0:5:176:-15.983,-1.50515,0	0/1:7:1,6:1:36:6:212:-17.1209,0,-1.49106	1/1:13:0,13:0:0:13:440:-39.5487,-3.91339,0	0/1:4:2,2:2:72:2:68:-5.20047,0,-5.6326	1/1:287:0,287:0:0:287:10295:-921.621,-86.3956,0	1/1:158:0,158:0:0:158:5554:-490.724,-47.5627,0	1/1:74:0,74:0:0:74:2639:-234.482,-22.2762,0	1/1:5:0,5:0:0:5:180:-16.3232,-1.50515,0	0/1:91:48,43:48:1711:43:1511:-106.623,0,-126.872	0/1:36:20,16:20:720:16:572:-40.3182,0,-54.2871	1/1:166:0,166:0:0:166:5935:-525.666,-49.971,0	1/1:120:0,120:0:0:120:4300:-379.866,-36.1236,0	1/1:119:0,119:0:0:119:4268:-377.408,-35.8226,0	1/1:152:0,152:0:0:152:5420:-484.698,-45.7566,0	1/1:146:0,146:0:0:146:5197:-461.271,-43.9504,0	0/1:128:55,73:55:1964:73:2599:-191.776,0,-138.501	1/1:129:0,129:0:0:129:4600:-407.304,-38.8329,0	1/1:178:0,178:0:0:178:6349:-561.823,-53.5833,0	1/1:160:0,160:0:0:160:5660:-507.021,-48.1648,0	1/1:7:0,7:0:0:7:252:-22.5634,-2.10721,0	0/1:121:64,57:64:2296:57:2036:-144.673,0,-170.476	1/1:76:0,76:0:0:76:2732:-244.466,-22.8783,0	0/1:29:14,15:14:486:15:536:-39.3374,0,-35.338	0/1:77:36,41:36:1280:41:1456:-105.072,0,-92.2587	1/1:121:0,121:0:0:121:4304:-380.672,-36.4246,0	1/1:9:0,9:0:0:9:324:-29.4317,-2.70927,0	1/1:15:0,15:0:0:15:536:-48.1841,-4.51545,0	1/1:94:0,94:0:0:94:3345:-295.149,-28.2968,0	1/1:142:0,142:0:0:142:5100:-449.778,-42.7463,0	1/1:15:0,15:0:0:15:532:-47.5005,-4.51545,0	1/1:163:0,163:0:0:163:5781:-516.697,-49.0679,0	1/1:176:4,172:4:140:172:6124:-526.817,-40.0367,0	0/1:132:51,81:51:1815:81:2904:-217.447,0,-123.89	1/1:54:0,54:0:0:54:1872:-164.962,-16.2556,0	1/1:148:0,148:0:0:148:5257:-463.692,-44.5524,0	1/1:81:0,81:0:0:81:2866:-252.952,-24.3834,0	1/1:54:0,54:0:0:54:1944:-170.98,-16.2556,0	1/1:80:0,80:0:0:80:2840:-252.836,-24.0824,0	1/1:122:0,122:0:0:122:4349:-388.907,-36.7257,0	0/1:33:19,14:19:676:14:496:-34.2076,0,-51.2247	1/1:85:0,85:0:0:85:3008:-267.237,-25.5876,0	0/1:84:37,47:37:1324:47:1680:-124.593,0,-94.1756	1/1:258:0,258:0:0:258:9187:-811.603,-77.6657,0	1/1:144:0,144:0:0:144:5106:-450.833,-43.3483,0	0/1:172:75,97:75:2679:97:3463:-255.312,0,-189.387	1/1:150:0,150:0:0:150:5330:-473.592,-45.1545,0	1/1:25:0,25:0:0:25:892:-79.2437,-7.52575,0	1/1:126:0,126:0:0:126:4480:-397.252,-37.9298,0	0/1:64:23,41:23:799:41:1460:-110.586,0,-52.9616	1/1:195:0,195:0:0:195:6909:-611.962,-58.7009,0	1/1:135:0,135:0:0:135:4852:-429.39,-40.6391,0	1/1:76:0,76:0:0:76:2724:-241.483,-22.8783,0	1/1:139:0,138:0:0:138:4934:-435.538,-41.5421,0	1/1:197:0,197:0:0:197:7064:-625.347,-59.3029,0	1/1:47:0,47:0:0:47:1684:-150.223,-14.1484,0	0/1:105:55,50:55:1939:50:1796:-128.119,0,-143.178	0/1:115:62,53:62:2211:53:1904:-135.109,0,-164.611	1/1:55:0,55:0:0:55:1972:-173.686,-16.5567,0	0/1:130:66,64:66:2368:64:2300:-162.767,0,-174.232	0/1:89:65,24:65:2312:24:860:-49.2046,0,-181.547	1/1:79:0,79:0:0:79:2824:-250.518,-23.7814,0	1/1:151:0,151:0:0:151:5404:-477.933,-45.4555,0
chr08	9635298	.	A	T	11483.8	PASS	AB=0.265393;ABP=2029.57;AC=22;AF=0.117021;AN=188;AO=1141;CIGAR=1X;DP=21053;DPB=21053;DPRA=0.956571;EPP=2480.66;EPPR=43224;GTI=6;LEN=1;MEANALT=1.03846;MQM=59.9606;MQMR=59.9505;NS=94;NUMALT=1;ODDS=5.02418;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=40740;QR=711781;RO=19904;RPL=0;RPP=2480.66;RPPR=43224;RPR=1141;RUN=1;SAF=1141;SAP=2480.66;SAR=0;SRF=19904;SRP=43224;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:84:84,0:84:3008:0:0:0,-25.2865,-270.95	0/0:439:439,0:439:15625:0:0:0,-132.152,-1405.59	0/0:224:224,0:224:8002:0:0:0,-67.4307,-720.019	0/0:449:449,0:449:15960:0:0:0,-135.162,-1436.08	0/0:152:152,0:152:5433:0:0:0,-45.7566,-489.098	0/0:100:100,0:100:3596:0:0:0,-30.103,-323.447	0/0:322:321,0:321:11482:0:0:0,-96.6306,-1032.77	0/0:460:460,0:460:16460:0:0:0,-138.474,-1481.05	0/0:162:162,0:162:5797:0:0:0,-48.7669,-521.842	0/0:234:234,0:234:8362:0:0:0,-70.441,-752.546	0/0:93:93,0:93:3340:0:0:0,-27.9958,-300.816	0/0:158:158,0:158:5664:0:0:0,-47.5627,-509.874	0/0:179:177,0:177:6338:0:0:0,-53.2823,-570.147	0/0:118:118,0:118:4221:0:0:0,-35.5215,-380.069	0/0:112:112,0:112:4016:0:0:0,-33.7154,-361.624	0/0:166:166,0:166:5952:0:0:0,-49.971,-535.656	0/0:132:132,0:132:4714:0:0:0,-39.736,-424.417	0/0:139:139,0:139:4996:0:0:0,-41.8432,-449.777	0/0:83:83,0:83:2969:0:0:0,-24.9855,-267.441	0/0:530:529,0:529:18966:0:0:0,-159.245,-1706.12	0/0:285:285,0:285:10202:0:0:0,-85.7935,-917.975	0/0:320:320,0:320:11461:0:0:0,-96.3296,-1031.36	0/0:150:150,0:150:5377:0:0:0,-45.1545,-484.056	0/1:217:163,54:163:5803:54:1938:-109.373,0,-456.901	0/0:126:126,0:126:4505:0:0:0,-37.9298,-405.61	0/1:661:500,161:500:17783:161:5707:-314.743,0,-1401.09	0/0:495:495,0:495:17617:0:0:0,-149.01,-1584.88	0/1:82:63,19:63:2268:19:684:-37.2059,0,-179.697	0/0:799:799,0:799:28605:0:0:0,-240.523,-2573.56	0/0:275:272,3:272:9711:3:108:0,-72.7081,-863.057	0/1:198:139,59:139:4962:59:2101:-129.754,0,-387.123	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:10:5,5:5:180:5:176:-13.1741,0,-13.5418	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.909	0/1:31:22,9:22:788:9:320:-19.8104,0,-61.9129	0/0:418:418,0:418:14979:0:0:0,-125.831,-1347.83	0/0:548:548,0:548:19453:0:0:0,-164.964,-1750.22	0/0:145:145,0:145:5216:0:0:0,-43.6493,-469.575	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:335:230,105:230:8261:105:3758:-237.573,0,-642.636	0/1:100:81,19:81:2912:19:684:-31.7873,0,-232.212	0/0:313:313,0:313:11217:0:0:0,-94.2224,-1009.41	0/0:167:167,0:167:5958:0:0:0,-50.272,-536.321	0/0:196:196,0:196:7033:0:0:0,-59.0019,-633.023	0/0:202:202,0:202:7222:0:0:0,-60.8081,-650.031	0/0:389:388,1:388:13859:1:36:0,-113.502,-1243	0/1:403:307,96:307:11001:96:3439:-188.405,0,-868.662	0/0:294:294,0:294:10458:0:0:0,-88.5028,-941.121	0/0:357:357,0:357:12779:0:0:0,-107.468,-1149.92	0/0:329:328,0:328:11761:0:0:0,-98.7378,-1057.99	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.0423	0/1:290:207,83:207:7379:83:2972:-180.406,0,-576.668	0/0:86:86,0:86:3058:0:0:0,-25.8886,-275.447	0/1:36:23,13:23:828:13:454:-30.3541,0,-63.9989	0/1:344:238,106:238:8491:106:3778:-236.662,0,-660.477	0/0:136:136,0:136:4835:0:0:0,-40.9401,-435.302	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/0:113:113,0:113:4041:0:0:0,-34.0164,-363.87	0/0:239:239,0:239:8596:0:0:0,-71.9462,-773.63	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1525	0/0:568:568,0:568:20332:0:0:0,-170.985,-1829.37	0/0:466:459,6:459:16397:6:216:0,-120.548,-1455.52	0/1:152:110,42:110:3944:42:1496:-89.178,0,-308.03	0/0:240:240,0:240:8560:0:0:0,-72.2472,-770.26	0/0:343:343,0:343:12268:0:0:0,-103.253,-1103.94	0/0:269:263,6:263:9418:6:216:0,-61.1866,-827.787	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/0:200:200,0:200:7154:0:0:0,-60.206,-643.896	0/0:132:132,0:132:4744:0:0:0,-39.736,-427.116	0/1:33:25,8:25:900:8:288:-16.3334,0,-71.387	0/0:269:268,0:268:9594:0:0:0,-80.676,-862.615	0/1:165:114,51:114:4070:51:1822:-114.591,0,-316.814	0/0:246:246,0:246:8836:0:0:0,-74.0534,-795.191	0/0:475:475,0:475:16973:0:0:0,-142.989,-1527.19	0/1:204:158,46:158:5627:46:1637:-86.1984,0,-445.131	0/0:244:244,0:244:8734:0:0:0,-73.4513,-786.045	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:297:297,0:297:10603:0:0:0,-89.4059,-954.18	0/1:283:222,61:222:7972:61:2181:-111.363,0,-632.307	0/0:522:522,0:522:18638:0:0:0,-157.138,-1676.99	0/0:229:229,0:229:8201:0:0:0,-68.9359,-738.098	0/0:143:142,0:142:5088:0:0:0,-42.7463,-457.699	0/0:154:154,0:154:5517:0:0:0,-46.3586,-496.653	0/0:339:339,0:339:12153:0:0:0,-102.049,-1093.61	0/0:108:108,0:108:3865:0:0:0,-32.5112,-347.854	0/1:151:114,37:114:4096:37:1317:-73.3661,0,-322.432	0/1:171:127,44:127:4560:44:1584:-91.3754,0,-359.087	0/0:68:68,0:68:2448:0:0:0,-20.47,-220.527	0/1:194:143,51:143:5129:51:1827:-106.31,0,-403.349	0/1:168:116,52:116:4132:52:1857:-116.835,0,-321.49	0/0:322:322,0:322:11515:0:0:0,-96.9317,-1036.22	0/0:216:216,0:216:7729:0:0:0,-65.0225,-695.639
chr08	9635306	.	G	T,C	188682	PASS	AB=0.51243,0.200785;ABP=31.1358,4557.66;AC=85,12;AF=0.452128,0.0638298;AN=188;AO=10739,1176;CIGAR=1X,1X;DP=20967;DPB=20967;DPRA=0,0;EPP=23322.5,2556.66;EPPR=19633.1;GTI=7;LEN=1,1;MEANALT=1.33333,1.96429;MQM=59.9427,59.9592;MQMR=59.9692;NS=94;NUMALT=2;ODDS=6.09974;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=384291,42031;QR=322126;RO=9048;RPL=0,0;RPP=23322.5,2556.66;RPPR=19633.1;RPR=10739,1176;RUN=1,1;SAF=10739,1176;SAP=23322.5,2556.66;SAR=0,0;SRF=9048;SRP=19650.5;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:83:26,57,0:26:928:57,0:2052,0:-159.965,0,-58.8528,-167.792,-76.0115,-243.445	0/1:436:155,281,0:155:5519:281,0:10093,0:-776.778,0,-365.584,-823.437,-450.174,-1273.25	0/1:223:104,119,0:104:3702:119,0:4256,0:-316.078,0,-266.215,-347.385,-302.037,-649.066	0/1:449:183,266,0:183:6511:266,0:9490,0:-718.894,0,-450.897,-773.982,-530.971,-1304.6	0/1:152:56,96,0:56:1997:96,0:3433,0:-263.426,0,-134.245,-280.284,-163.144,-443.071	0/1:99:53,46,0:53:1889:46,0:1656,0:-119.498,0,-140.114,-135.453,-153.961,-289.056	0/1:318:131,186,0:131:4670:186,0:6568,0:-495.541,0,-324.822,-534.976,-380.814,-915.647	0/1:457:141,316,0:141:4996:316,0:11286,0:-878.054,0,-312.215,-920.499,-407.34,-1327.48	0/1:162:78,83,1:78:2750:83,1:2980,36:-219.606,0,-198.915,-240.149,-220.963,-463.753	0/1:230:97,133,0:97:3412:133,0:4749,0:-358.326,0,-238.043,-387.526,-278.08,-665.253	0/1:94:58,36,0:58:2031:36,0:1296,0:-88.6448,0,-154.76,-106.105,-165.598,-271.346	0/1:154:88,66,0:88:3130:66,0:2368,0:-167.011,0,-235.564,-193.502,-255.432,-448.576	0/1:182:98,84,0:98:3497:84,0:2988,0:-214.363,0,-260.152,-243.864,-285.439,-528.947	0/1:118:67,51,0:67:2333:51,0:1828,0:-129.279,0,-174.701,-149.448,-190.053,-339.148	0/1:110:55,55,0:55:1976:55,0:1972,0:-144.637,0,-145.001,-161.194,-161.558,-322.393	0/1:171:100,71,0:100:3557:71,0:2535,0:-176.924,0,-268.805,-207.027,-290.178,-496.849	0/1:129:74,55,0:74:2633:55,0:1969,0:-138.652,0,-198.383,-160.928,-214.94,-375.511	0/1:138:89,48,0:89:3185:48,0:1713,0:-112.853,0,-245.271,-139.644,-259.72,-399.367	0/1:83:45,38,0:45:1597:38,0:1360,0:-97.7151,0,-119.033,-111.261,-130.472,-241.377	0/1:524:155,369,0:155:5560:369,0:13213,0:-1031.22,0,-342.783,-1077.88,-453.863,-1531.39	0/1:282:138,144,0:138:4945:144,0:5159,0:-379.502,0,-360.307,-421.044,-403.655,-824.341	0/1:322:123,199,0:123:4331:199,0:7148,0:-546.442,0,-293.033,-583.468,-352.938,-936.052	0/1:149:52,97,0:52:1852:97,0:3469,0:-267.564,0,-122.106,-283.218,-151.306,-434.168	0/1:219:104,58,57:104:3709:58,57:2088,2036:-139.065,0,-284.817,-4.37648,-136.28,-289.493	0/1:123:63,60,0:63:2230:60,0:2134,0:-155.294,0,-163.934,-174.259,-181.996,-355.9	0/1:652:293,197,162:293:10425:197,162:7045,5772:-486.249,0,-790.309,-103.978,-379.139,-904.822	0/1:494:274,220,0:274:9730:220,0:7865,0:-559.056,0,-726.94,-641.539,-793.167,-1434.35	0/1:83:37,25,21:37:1313:25,21:891,748:-61.4894,0,-99.4499,-11.66,-46.0075,-112.314	0/1:794:281,513,0:281:10010:513,0:18316,0:-1408.98,0,-661.815,-1493.57,-816.243,-2309.46	0/1:275:95,177,3:95:3371:177,3:6314,108:-485.764,0,-221.363,-505.55,-265.833,-779.296	0/1:199:69,69,61:69:2468:69,61:2457,2172:-179.485,0,-180.475,-23.2281,-24.2191,-206.112	1/2:11:3,4,4:3:104:4,4:144,144:-14.1564,-3.30978,-10.5531,-3.30978,0,-10.5531	0/1:33:13,20,0:13:468:20,0:716,0:-54.8337,0,-32.5257,-58.7471,-38.5463,-96.9343	0/2:10:5,0,5:5:180:0,5:0,180:-13.5402,-15.0453,-29.7324,0,-15.0469,-13.5418	0/1:32:10,22,0:10:360:22,0:792,0:-61.9727,0,-23.1113,-64.983,-29.734,-94.3572	1/2:31:8,14,9:8:288:14,9:504,324:-41.653,-2.93742,-22.2223,-17.6245,0,-38.4146	0/1:416:233,183,0:233:8315:183,0:6580,0:-467.049,0,-623.128,-537.189,-678.216,-1215.05	0/1:539:208,331,0:208:7407:331,0:11864,0:-905.35,0,-504.421,-967.964,-604.062,-1571.67	0/1:144:84,60,0:84:3016:60,0:2160,0:-151.318,0,-228.322,-176.605,-246.384,-422.629	0/1:8:1,7,0:1:36:7,0:252,0:-20.6207,0,-1.19003,-20.9217,-3.29724,-23.8592	0/1:339:114,115,110:114:4073:115,110:4098,3948:-299.699,0,-297.462,-11.9769,-10.0405,-310.945	0/1:100:60,21,19:60:2160:21,19:756,680:-43.6251,0,-169.925,-6.236,-120.795,-176.761	0/1:311:104,207,0:104:3721:207,0:7412,0:-573.503,0,-241.469,-604.81,-303.782,-908.235	0/1:166:102,64,0:102:3664:64,0:2292,0:-156.566,0,-279.992,-187.271,-299.257,-486.17	0/1:192:111,81,0:111:3969:81,0:2897,0:-203.163,0,-299.602,-236.578,-323.985,-560.205	0/1:201:69,132,0:69:2438:132,0:4729,0:-365.26,0,-159.165,-386.031,-198.901,-584.577	0/1:385:148,236,1:148:5293:236,1:8456,36:-645.085,0,-360.549,-686.7,-428.654,-1117.99	0/1:404:180,124,100:180:6423:124,100:4444,3571:-308.258,0,-486.285,-71.309,-232.477,-564.818	0/1:290:79,211,0:79:2772:211,0:7561,0:-593.221,0,-162.418,-617.003,-225.935,-842.585	0/1:357:142,214,0:142:5089:214,0:7671,0:-582.895,0,-350.625,-625.641,-415.045,-1040.69	0/1:326:111,215,0:111:3958:215,0:7723,0:-596.964,0,-258.273,-630.378,-322.995,-953.015	0/1:20:12,8,0:12:432:8,0:285,0:-19.9277,0,-33.2006,-23.54,-35.6088,-58.7917	0/2:292:122,85,85:122:4333:85,85:3026,3056:-212.589,-2.69057,-330.157,0,-106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chr08	9635315	.	GAGT	GAGG	140984	PASS	AB=0.421339;ABP=1127.28;AC=94;AF=0.5;AN=188;AO=8814;CIGAR=3M1X;DP=20919;DPB=20919;DPRA=0;EPP=18813.7;EPPR=25956.7;GTI=0;LEN=1;MEANALT=1.7766;MQM=59.9755;MQMR=59.9409;NS=94;NUMALT=1;ODDS=86.245;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=314557;QR=425660;RO=12020;RPL=38;RPP=18813.7;RPPR=25956.7;RPR=8776;RUN=1;SAF=8814;SAP=19142.4;SAR=0;SRF=12020;SRP=26104.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:83:58,23:58:2060:23:828:-50.1744,0,-161.004	0/1:439:289,147:289:10266:147:5204:-336.943,0,-792.297	0/1:222:121,99:121:4266:99:3556:-253.752,0,-317.162	0/1:444:268,173:268:9482:173:6155:-420.972,0,-720.274	0/1:149:95,54:95:3371:54:1936:-129.663,0,-258.753	0/1:97:46,51:46:1639:51:1817:-134.239,0,-118.57	0/1:318:190,127:190:6688:127:4513:-310.691,0,-506.35	0/1:454:319,133:319:11251:133:4753:-291.502,0,-876.068	0/1:164:85,77:85:3008:77:2720:-195.981,0,-221.888	0/1:226:134,91:134:4756:91:3240:-223.774,0,-360.155	0/1:93:36,56:36:1269:56:1994:-151.717,0,-86.4955	0/1:151:67,84:67:2371:84:2990:-223.875,0,-168.185	0/1:181:84,97:84:2943:97:3472:-258.205,0,-210.618	0/1:114:51,63:51:1803:63:2252:-168.626,0,-128.233	0/1:111:54,57:54:1932:57:2026:-149.198,0,-140.737	0/1:169:70,97:70:2447:97:3475:-262.205,0,-169.857	0/1:126:56,70:56:1975:70:2500:-187.323,0,-140.094	0/1:138:48,89:48:1704:89:3192:-246.04,0,-112.173	0/1:82:38,44:38:1357:44:1580:-117.807,0,-97.7459	0/1:526:369,155:369:13090:155:5533:-340.001,0,-1019.82	0/1:281:144,136:144:5127:136:4872:-353.984,0,-376.897	0/1:317:190,124:190:6744:124:4428:-303.81,0,-512.155	0/1:149:98,51:98:3479:51:1828:-119.947,0,-268.467	0/1:216:114,101:114:4034:101:3591:-258.306,0,-298.168	0/1:125:62,63:62:2181:63:2256:-165.674,0,-158.919	0/1:661:365,292:365:12917:292:10407:-738.424,0,-964.21	0/1:492:222,267:222:7867:267:9538:-710.85,0,-560.271	0/1:82:47,35:47:1663:35:1260:-89.0206,0,-125.273	0/1:789:516,271:516:18288:271:9713:-636.845,0,-1408.24	0/1:270:177,90:177:6237:90:3209:-208.394,0,-480.796	0/1:199:130,68:130:4588:68:2421:-158.181,0,-353.125	0/1:11:8,3:8:287:3:104:-6.39148,0,-22.8652	0/1:33:20,13:20:712:13:468:-32.5257,0,-54.4721	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5402	0/1:32:22,10:22:792:10:356:-22.7483,0,-61.9727	0/1:31:23,8:23:812:8:288:-16.9355,0,-64.0685	0/1:414:186,228:186:6619:228:8125:-606.64,0,-471.166	0/1:546:339,204:339:11985:204:7273:-490.803,0,-914.686	0/1:141:61,80:61:2181:80:2872:-216.271,0,-154.111	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/1:335:225,109:225:7974:109:3899:-250.2,0,-616.775	0/1:99:40,58:40:1431:58:2073:-156.978,0,-99.2269	0/1:314:209,105:209:7378:105:3752:-243.357,0,-569.55	0/1:164:65,98:65:2291:98:3493:-265.212,0,-157.081	0/1:192:84,108:84:2922:108:3863:-290.066,0,-205.415	0/1:203:136,67:136:4793:67:2376:-152.988,0,-370.422	0/1:385:244,141:244:8656:141:5011:-335.239,0,-662.917	0/1:408:227,180:227:8003:180:6436:-456.486,0,-597.46	0/1:297:218,77:218:7731:77:2756:-159.191,0,-606.734	0/1:354:214,138:214:7630:138:4916:-336.296,0,-580.446	0/1:328:220,108:220:7780:108:3868:-249.577,0,-601.499	0/1:19:8,11:8:287:11:392:-29.9005,0,-20.3697	0/1:291:170,119:170:6014:119:4280:-298.069,0,-454.057	0/1:86:60,26:60:2151:26:915:-56.777,0,-167.968	0/1:38:26,12:26:922:12:428:-27.4197,0,-71.8497	0/1:344:226,118:226:7981:118:4207:-275.258,0,-614.61	0/1:136:102,31:102:3610:31:1108:-59.6344,0,-284.711	0/1:26:16,10:16:560:10:352:-24.1914,0,-42.9012	0/1:33:15,18:15:526:18:644:-48.3566,0,-37.7353	0/1:112:65,47:65:2310:47:1665:-116.42,0,-174.442	0/1:238:126,111:126:4510:111:3976:-286.326,0,-334.365	0/1:31:23,8:23:824:8:288:-16.9355,0,-65.1514	0/1:567:303,260:303:10734:260:9250:-662.634,0,-796.136	0/1:464:302,161:302:10757:161:5756:-378.438,0,-828.316	0/1:151:76,75:76:2716:75:2668:-194.678,0,-199.228	0/1:239:150,86:150:5299:86:3084:-206.385,0,-405.518	0/1:343:211,130:211:7434:130:4660:-316.668,0,-565.367	0/1:270:188,79:188:6638:79:2821:-173.409,0,-516.787	0/1:33:11,22:11:396:22:775:-60.1364,0,-26.0488	0/1:197:105,92:105:3726:92:3276:-235.759,0,-276.239	0/1:129:60,69:60:2117:69:2464:-183.182,0,-151.965	0/1:32:17,10:17:600:10:360:-24.2646,0,-45.8514	0/1:265:141,124:141:4997:124:4415:-317.523,0,-370.107	0/1:164:102,62:102:3600:62:2228:-151.415,0,-274.838	0/1:244:157,87:157:5522:87:3088:-204.696,0,-423.656	0/1:471:267,204:267:9479:204:7277:-513.196,0,-711.273	0/1:207:99,108:99:3510:108:3827:-282.31,0,-253.782	0/1:239:136,103:136:4821:103:3677:-259.178,0,-362.101	0/1:31:18,13:18:641:13:464:-32.7656,0,-48.6873	0/1:298:201,97:201:7159:97:3465:-222.354,0,-554.656	0/1:284:145,138:145:5115:138:4928:-358.24,0,-375.068	0/1:526:365,159:365:12940:159:5657:-351.149,0,-1006.32	0/1:226:105,121:105:3729:121:4308:-319.865,0,-267.779	0/1:142:48,94:48:1712:94:3368:-260.585,0,-111.619	0/1:154:61,92:61:2179:92:3281:-249.103,0,-149.924	0/1:333:151,181:151:5351:181:6462:-481.364,0,-381.105	0/1:110:48,61:48:1692:61:2168:-162.213,0,-119.374	0/1:150:70,79:70:2456:79:2803:-207.298,0,-176.079	0/1:167:73,94:73:2589:94:3336:-250.185,0,-182.987	0/1:65:30,35:30:1063:35:1243:-92.601,0,-76.4146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chr08	9656628	.	C	T	476253	PASS	AB=0.475899;ABP=48.3323;AC=166;AF=0.882979;AN=188;AO=21713;CIGAR=1X;DP=26463;DPB=26463;DPRA=0;EPP=46935.3;EPPR=10252.4;GTI=7;LEN=1;MEANALT=1.08511;MQM=59.9889;MQMR=59.9857;NS=94;NUMALT=1;ODDS=0.181632;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=777619;QR=169597;RO=4740;RPL=25;RPP=46935.3;RPPR=10252.4;RPR=21688;RUN=1;SAF=21713;SAP=47152.2;SAR=0;SRF=4740;SRP=10295.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:75:0,75:0:0:75:2700:-243.243,-22.5773,0	1/1:95:0,95:0:0:95:3401:-306.303,-28.5979,0	1/1:119:1,118:1:36:118:4228:-377.102,-32.2243,0	1/1:258:0,257:0:0:257:9225:-829.855,-77.3647,0	1/1:89:0,89:0:0:89:3161:-284.713,-26.7917,0	1/1:83:0,83:0:0:83:2971:-267.622,-24.9855,0	1/1:59:0,59:0:0:59:2109:-190.078,-17.7608,0	1/1:213:0,213:0:0:213:7602:-684.216,-64.1194,0	1/1:147:0,147:0:0:147:5255:-473.087,-44.2514,0	1/1:98:0,98:0:0:98:3502:-315.39,-29.5009,0	1/1:299:1,298:1:36:298:10700:-959.298,-86.4097,0	1/1:72:0,72:0:0:72:2566:-231.189,-21.6742,0	1/1:47:0,47:0:0:47:1680:-151.487,-14.1484,0	1/1:54:0,54:0:0:54:1936:-174.516,-16.2556,0	1/1:38:0,38:0:0:38:1351:-121.889,-11.4391,0	1/1:52:0,52:0:0:52:1872:-168.759,-15.6536,0	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:156:0,156:0:0:156:5587:-502.951,-46.9607,0	1/1:288:0,288:0:0:288:10288:-925.842,-86.6966,0	1/1:137:0,137:0:0:137:4902:-441.33,-41.2411,0	1/1:168:0,168:0:0:168:6044:-544.06,-50.573,0	1/1:147:0,147:0:0:147:5206:-468.679,-44.2514,0	0/1:96:42,54:42:1508:54:1928:-144.897,0,-107.116	1/1:113:0,113:0:0:113:4050:-364.686,-34.0164,0	0/1:304:166,138:166:5913:138:4900:-349.637,0,-440.768	1/1:239:0,239:0:0:239:8535:-768.146,-71.9462,0	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	1/1:243:1,242:1:36:242:8686:-778.131,-69.552,0	1/1:174:7,167:7:248:167:5946:-512.584,-29.715,0	0/1:115:70,45:70:2516:45:1616:-111.112,0,-192.045	0/1:1132:545,587:545:19478:587:21016:-1550.14,0,-1411.79	1/1:1333:4,1329:4:144:1329:47589:-4268.03,-387.959,0	0/1:930:440,490:440:15761:490:17548:-1298.97,0,-1138.22	1/1:1750:3,1747:3:104:1747:62533:-5615.95,-517.1,0	0/1:2266:1173,1089:1173:41990:1089:39027:-2829.87,0,-3096.14	1/1:145:0,145:0:0:145:5208:-468.857,-43.6494,0	1/1:125:0,125:0:0:125:4467:-402.2,-37.6288,0	1/1:353:0,353:0:0:353:12657:-1138.83,-106.264,0	1/1:589:0,589:0:0:589:21106:-1899,-177.307,0	0/1:263:144,119:144:5147:119:4268:-305.127,0,-384.201	0/1:213:114,99:114:4100:99:3554:-255.947,0,-305.064	1/1:115:0,115:0:0:115:4136:-372.422,-34.6185,0	1/1:39:0,39:0:0:39:1404:-126.659,-11.7402,0	1/1:42:0,42:0:0:42:1512:-136.375,-12.6433,0	1/1:139:0,139:0:0:139:4975:-447.897,-41.8432,0	1/1:204:0,204:0:0:204:7294:-656.508,-61.4101,0	0/1:193:107,86:107:3831:86:3069:-218.339,0,-286.879	1/1:115:0,115:0:0:115:4107:-369.813,-34.6185,0	1/1:131:0,131:0:0:131:4712:-424.237,-39.4349,0	1/1:100:0,100:0:0:100:3584:-322.767,-30.103,0	1/1:1427:0,1427:0:0:1427:51121:-4599.08,-429.57,0	0/1:260:140,120:140:4973:120:4320:-310.706,0,-369.451	1/1:65:0,65:0:0:65:2332:-210.14,-19.567,0	0/1:698:368,330:368:13146:330:11797:-851.044,0,-972.824	0/1:187:104,83:104:3711:83:2956:-209.98,0,-277.9	1/1:44:1,43:1:36:43:1548:-136.015,-9.64705,0	1/1:1463:3,1459:3:108:1459:52274:-4692.75,-430.308,0	1/1:711:1,710:1:36:710:25461:-2287.16,-210.434,0	1/1:72:0,72:0:0:72:2592:-233.528,-21.6742,0	1/1:57:0,57:0:0:57:2052:-184.951,-17.1587,0	1/1:672:1,671:1:36:671:24053:-2160.51,-198.694,0	1/1:101:0,101:0:0:101:3625:-326.453,-30.404,0	1/1:191:6,185:6:216:185:6616:-575.726,-37.7062,0	0/1:69:27,42:27:972:42:1512:-115.604,0,-67.0268	1/1:138:0,138:0:0:138:4960:-446.547,-41.5421,0	1/1:171:1,170:1:36:170:6081:-543.791,-47.8779,0	1/1:229:0,229:0:0:229:8206:-738.548,-68.9359,0	1/1:333:1,331:1:36:331:11879:-1065.44,-96.6286,0	1/1:80:0,80:0:0:80:2863:-257.907,-24.0824,0	1/1:38:0,38:0:0:38:1353:-122.068,-11.4391,0	0/1:972:571,401:571:20425:401:14376:-1000.98,0,-1545.15	1/1:179:0,178:0:0:178:6349:-571.287,-53.5833,0	0/1:104:60,44:60:2135:44:1553:-108.753,0,-161.11	1/1:172:0,172:0:0:172:6172:-555.447,-51.7772,0	1/1:214:0,214:0:0:214:7688:-691.951,-64.4204,0	0/1:129:65,64:65:2327:64:2299:-168.338,0,-170.856	1/1:156:2,154:2:72:154:5521:-490.175,-40.124,0	1/1:1301:1,1299:1:36:1299:46520:-4181.47,-388.026,0	1/1:152:0,152:0:0:152:5410:-487.031,-45.7566,0	0/1:120:67,52:67:2396:52:1868:-132.217,0,-179.715	1/1:228:0,228:0:0:228:8162:-734.591,-68.6348,0	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	1/1:53:1,52:1:36:52:1860:-164.084,-12.3589,0	1/1:39:0,39:0:0:39:1389:-125.307,-11.7402,0	1/1:97:0,97:0:0:97:3492:-314.489,-29.1999,0	1/1:18:1,17:1:36:17:597:-50.4587,-1.82027,0	0/1:71:37,34:37:1328:34:1224:-89.0939,0,-98.4491	0/1:49:29,20:29:1040:20:716:-50.0172,0,-79.1639	1/1:266:0,266:0:0:266:9522:-856.935,-80.074,0	0/1:717:369,348:369:13244:348:12444:-903.954,0,-975.917	0/1:76:55,21:55:1972:21:756:-45.4889,0,-154.877	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:84:1,83:1:36:83:2979:-264.744,-21.6882,0
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chr08	10222408	.	A	G	12998.4	PASS	AB=0.518097;ABP=7.25428;AC=22;AF=0.117021;AN=188;AO=782;CIGAR=1X;DP=7018;DPB=7018;DPRA=1.04096;EPP=1701.1;EPPR=13540;GTI=0;LEN=1;MEANALT=1.04;MQM=59.9629;MQMR=59.9705;NS=94;NUMALT=1;ODDS=9.07156;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=27900;QR=223480;RO=6234;RPL=0;RPP=1701.1;RPPR=13540;RPR=782;RUN=1;SAF=782;SAP=1701.1;SAR=0;SRF=6234;SRP=13540;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:57:57,0:57:2036:0:0:0,-17.1587,-183.512	0/0:97:96,0:96:3444:0:0:0,-28.8989,-309.813	0/0:182:181,1:181:6504:1:36:0,-51.1892,-581.843	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.684	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.165	0/0:105:105,0:105:3719:0:0:0,-31.6081,-334.878	0/0:99:99,0:99:3560:0:0:0,-29.802,-320.607	0/0:64:64,0:64:2266:0:0:0,-19.2659,-204.199	0/0:68:68,0:68:2444:0:0:0,-20.47,-220.215	0/0:97:97,0:97:3492:0:0:0,-29.1999,-314.489	0/0:69:69,0:69:2469:0:0:0,-20.7711,-222.462	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.332	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.616	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:73:73,0:73:2613:0:0:0,-21.9752,-235.416	0/0:125:125,0:125:4484:0:0:0,-37.6287,-403.728	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.855	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/1:41:26,15:26:936:15:517:-34.5124,0,-72.2172	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.946	0/1:166:76,90:76:2724:90:3201:-238.34,0,-195.432	0/0:153:153,0:153:5469:0:0:0,-46.0576,-492.337	0/1:19:13,6:13:468:6:216:-14.0482,0,-36.7401	0/0:151:151,0:151:5412:0:0:0,-45.4555,-487.209	0/0:113:111,2:111:3992:2:72:0,-27.1797,-352.631	0/1:87:46,41:46:1648:41:1468:-106.225,0,-122.419	0/1:23:9,14:9:324:14:500:-38.4125,0,-22.5822	0/0:30:30,0:30:1065:0:0:0,-9.0309,-96.1598	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:52:10,41:10:360:41:1453:-115.352,0,-17.0319	0/0:175:175,0:175:6264:0:0:0,-52.6802,-563.854	0/0:128:128,0:128:4600:0:0:0,-38.5318,-414.162	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:72:42,30:42:1512:30:1080:-75.8382,0,-114.7	0/1:29:10,19:10:356:19:684:-53.1605,0,-23.6514	0/0:87:87,0:87:3128:0:0:0,-26.1896,-281.745	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/0:72:72,0:72:2577:0:0:0,-21.6742,-232.177	0/0:160:160,0:160:5736:0:0:0,-48.1648,-516.356	0/0:152:152,0:152:5422:0:0:0,-45.7566,-488.108	0/1:137:74,63:74:2664:63:2260:-162.422,0,-197.987	0/0:91:91,0:91:3268:0:0:0,-27.3937,-294.34	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/0:18:18,0:18:640:0:0:0,-5.41854,-57.9293	0/1:86:43,43:43:1529:43:1540:-113.004,0,-111.822	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/1:27:11,16:11:396:16:576:-44.0472,0,-27.8549	0/1:101:51,50:51:1832:50:1746:-127.012,0,-134.757	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.399	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/0:127:127,0:127:4564:0:0:0,-38.2308,-410.924	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:130:130,0:130:4656:0:0:0,-39.1339,-419.104	0/0:135:129,6:129:4623:6:212:0,-21.2143,-396.807	0/1:51:29,22:29:1044:22:788:-55.8923,0,-78.9223	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/0:94:94,0:94:3368:0:0:0,-28.2968,-303.329	0/0:101:101,0:101:3636:0:0:0,-30.404,-327.443	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/1:31:10,21:10:360:21:748:-58.3134,0,-23.4124	0/0:196:196,0:196:7037:0:0:0,-59.0019,-633.359	0/1:63:33,30:33:1184:30:1065:-77.1949,0,-87.9034	0/0:108:108,0:108:3884:0:0:0,-32.5112,-349.753	0/0:81:81,0:81:2889:0:0:0,-24.3834,-260.245	0/1:87:39,48:39:1385:48:1728:-129.616,0,-98.7572	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/0:16:16,0:16:553:0:0:0,-4.81648,-50.094	0/0:76:76,0:76:2728:0:0:0,-22.8783,-245.763	0/1:68:35,33:35:1256:33:1184:-86.3983,0,-92.8752	0/0:148:148,0:148:5293:0:0:0,-44.5524,-476.493	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/0:75:75,0:75:2700:0:0:0,-22.5772,-243.243	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/0:95:95,0:95:3412:0:0:0,-28.5978,-307.293	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:66:36,30:36:1292:30:1080:-77.6453,0,-96.7158	0/1:82:49,33:49:1760:33:1180:-81.8236,0,-133.999	0/0:43:43,0:43:1529:0:0:0,-12.9443,-137.901	0/1:135:59,76:59:2116:76:2713:-203.773,0,-150.07	0/1:60:14,46:14:504:46:1637:-129.555,0,-27.6363	0/0:95:95,0:95:3389:0:0:0,-28.5978,-305.224	0/0:106:106,0:106:3789:0:0:0,-31.9092,-341.202
chr08	11592519	.	T	G	22761.2	PASS	AB=0.246009;ABP=5198.45;AC=40;AF=0.212766;AN=188;AO=2294;CIGAR=1X;DP=19858;DPB=19858;DPRA=1.23675;EPP=4984.37;EPPR=38134.1;GTI=8;LEN=1;MEANALT=1.04545;MQM=59.8723;MQMR=59.858;NS=94;NUMALT=1;ODDS=0.805644;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82026;QR=629336;RO=17560;RPL=0;RPP=4984.37;RPPR=38134.1;RPR=2294;RUN=1;SAF=2294;SAP=4984.37;SAR=0;SRF=17560;SRP=38134.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:56,7:56:1999:7:248:-3.6993,0,-161.214	0/0:319:319,0:319:11464:0:0:0,-96.0286,-1031.36	0/1:327:242,85:242:8704:85:3035:-174.936,0,-684.863	0/0:413:412,1:412:14775:1:36:0,-120.727,-1325.87	0/1:161:135,26:135:4831:26:932:-35.7326,0,-385.7	0/1:134:97,37:97:3456:37:1317:-78.4813,0,-270.896	0/0:266:266,0:266:9532:0:0:0,-80.074,-857.2	0/1:371:270,101:270:9680:101:3605:-212.965,0,-758.974	0/0:190:190,0:190:6796:0:0:0,-57.1957,-610.845	0/0:168:168,0:168:5993:0:0:0,-50.573,-538.678	0/0:186:186,0:186:6683:0:0:0,-55.9916,-601.487	0/0:120:120,0:120:4300:0:0:0,-36.1236,-387.17	0/0:135:135,0:135:4844:0:0:0,-40.639,-435.682	0/0:210:210,0:210:7540:0:0:0,-63.2163,-678.599	0/0:110:110,0:110:3925:0:0:0,-33.1133,-353.436	0/0:123:123,0:123:4404:0:0:0,-37.0267,-396.53	0/0:166:166,0:166:5928:0:0:0,-49.971,-533.492	0/0:113:113,0:113:4055:0:0:0,-34.0164,-365.132	0/0:104:104,0:104:3728:0:0:0,-31.3071,-335.717	0/1:329:267,62:267:9556:62:2197:-98.9552,0,-760.937	0/1:231:159,72:159:5678:72:2563:-161.379,0,-441.598	0/1:226:155,71:155:5538:71:2556:-162.257,0,-430.44	0/0:107:107,0:107:3840:0:0:0,-32.2102,-345.795	0/0:241:236,5:236:8464:5:180:0,-55.9962,-745.199	0/0:189:189,0:189:6769:0:0:0,-56.8947,-609.251	0/1:523:382,140:382:13692:140:5028:-295.155,0,-1074.06	0/0:536:536,0:536:19247:0:0:0,-161.352,-1731.02	0/0:59:59,0:59:2111:0:0:0,-17.7608,-190.255	0/1:621:490,131:490:17574:131:4704:-236.544,0,-1394.32	0/1:397:297,100:297:10629:100:3565:-201.534,0,-837.004	0/0:245:245,0:245:8783:0:0:0,-73.7523,-789.792	0/1:9:7,2:7:252:2:72:-4.12703,0,-20.3197	0/1:62:50,12:50:1787:12:432:-20.5573,0,-142.448	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5043	0/1:37:24,13:24:864:13:464:-30.9594,0,-66.9445	0/0:59:59,0:59:2120:0:0:0,-17.7608,-191.061	0/1:316:249,67:249:8928:67:2408:-121.851,0,-708.307	0/1:573:446,127:446:15974:127:4532:-235.555,0,-1264.63	0/0:174:174,0:174:6243:0:0:0,-52.3792,-561.938	0/1:17:11,6:11:396:6:212:-14.3073,0,-30.8652	0/0:279:279,0:279:10004:0:0:0,-83.9874,-900.182	0/0:81:81,0:81:2916:0:0:0,-24.3834,-262.64	0/0:283:283,0:283:10141:0:0:0,-85.1915,-912.058	0/0:87:87,0:87:3107:0:0:0,-26.1896,-279.851	0/1:123:97,26:97:3488:26:936:-47.5328,0,-277.097	0/1:123:100,23:100:3592:23:817:-36.8248,0,-286.457	0/0:327:326,0:326:11699:0:0:0,-98.1358,-1052.4	0/0:416:415,0:415:14874:0:0:0,-124.927,-1337.26	0/0:247:247,0:247:8852:0:0:0,-74.3544,-796.619	0/0:330:330,0:330:11805:0:0:0,-99.3399,-1062.28	0/1:322:246,76:246:8822:76:2724:-148.471,0,-697.031	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.221	0/0:385:385,0:385:13766:0:0:0,-115.897,-1238.49	0/0:83:83,0:83:2959:0:0:0,-24.9855,-266.53	0/0:59:59,0:59:2103:0:0:0,-17.7608,-189.535	0/0:364:364,0:364:13046:0:0:0,-109.575,-1173.68	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/1:28:14,14:14:500:14:504:-37.263,0,-36.8957	0/1:69:52,17:52:1855:17:612:-34.6139,0,-146.458	0/0:261:261,0:261:9368:0:0:0,-78.5688,-842.939	0/1:308:230,78:230:8247:78:2791:-158.684,0,-649.521	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:192:192,0:192:6895:0:0:0,-57.7978,-620.614	0/1:419:341,78:341:12222:78:2785:-124.758,0,-973.46	0/0:191:185,6:185:6640:6:216:0,-37.7066,-577.848	0/1:192:134,58:134:4816:58:2068:-128.592,0,-375.75	0/1:159:120,39:120:4308:39:1396:-78.0753,0,-340.027	0/1:314:206,108:206:7373:108:3865:-253.494,0,-569.093	0/1:90:64,26:64:2291:26:932:-57.1054,0,-179.357	0/1:200:138,61:138:4944:61:2174:-135.611,0,-384.695	0/1:214:176,38:176:6316:38:1354:-57.7382,0,-504.11	0/1:51:43,8:43:1544:8:288:-10.9149,0,-123.896	0/1:356:269,87:269:9616:87:3101:-172.143,0,-757.91	0/1:162:122,40:122:4358:40:1436:-80.7693,0,-343.624	0/1:332:257,75:257:9185:75:2696:-142.939,0,-726.679	0/0:346:346,0:346:12419:0:0:0,-104.156,-1117.45	0/1:454:315,139:315:11266:139:4963:-310.016,0,-877.118	0/1:335:245,90:245:8792:90:3206:-187.914,0,-690.328	0/1:36:31,5:31:1112:5:176:-5.34637,0,-89.5543	0/0:286:286,0:286:10257:0:0:0,-86.0946,-922.967	0/0:232:231,1:231:8259:1:36:0,-66.2407,-739.608	0/0:367:367,0:367:13146:0:0:0,-110.478,-1182.93	0/0:194:194,0:194:6967:0:0:0,-58.3998,-627.078	0/0:140:140,0:140:5020:0:0:0,-42.1442,-451.946	0/0:132:132,0:132:4732:0:0:0,-39.736,-425.333	0/0:236:236,0:236:8472:0:0:0,-71.0431,-762.432	0/0:83:83,0:83:2984:0:0:0,-24.9855,-268.64	0/1:148:115,33:115:4120:33:1188:-62.6731,0,-326.422	0/0:130:130,0:130:4664:0:0:0,-39.1339,-419.87	0/0:142:142,0:142:5091:0:0:0,-42.7463,-458.331	0/1:328:256,72:256:9179:72:2560:-131.902,0,-727.311	0/1:112:81,31:81:2900:31:1116:-67.0363,0,-227.508	0/0:158:158,0:158:5658:0:0:0,-47.5627,-509.338	0/0:175:175,0:175:6284:0:0:0,-52.6802,-565.636
chr08	11592539	.	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chr08	12050124	.	G	A	147870	PASS	AB=0.501264;ABP=3.03226;AC=165;AF=0.87766;AN=188;AO=6682;CIGAR=1X;DP=7494;DPB=7494;DPRA=0;EPP=14495.4;EPPR=1766.25;GTI=1;LEN=1;MEANALT=1;MQM=59.8955;MQMR=59.7648;NS=94;NUMALT=1;ODDS=6.99063;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=237104;QR=29004;RO=812;RPL=2;RPP=14495.4;RPPR=1766.25;RPR=6680;RUN=1;SAF=6682;SAP=14512.8;SAR=0;SRF=812;SRP=1766.25;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:33:0,33:0:0:33:1173:-105.846,-9.93399,0	1/1:81:0,81:0:0:81:2866:-258.176,-24.3834,0	1/1:121:0,121:0:0:121:4261:-383.599,-36.4246,0	1/1:120:0,120:0:0:120:4244:-382.118,-36.1236,0	1/1:52:1,51:1:36:51:1783:-157.147,-12.0553,0	1/1:49:0,49:0:0:49:1756:-158.324,-14.7505,0	1/1:76:1,75:1:36:75:2658:-235.865,-19.28,0	1/1:125:0,125:0:0:125:4445:-400.116,-37.6288,0	1/1:91:1,90:1:36:90:3225:-286.87,-23.7955,0	1/1:89:0,89:0:0:89:3139:-282.734,-26.7917,0	1/1:70:0,70:0:0:70:2497:-224.98,-21.0721,0	1/1:88:0,88:0:0:88:3156:-284.242,-26.4906,0	1/1:79:0,79:0:0:79:2821:-254.128,-23.7814,0	1/1:89:0,89:0:0:89:3192:-287.499,-26.7917,0	1/1:73:1,72:1:36:72:2539:-225.159,-18.3769,0	1/1:65:0,65:0:0:65:2325:-209.494,-19.567,0	1/1:89:0,89:0:0:89:3121:-281.091,-26.7917,0	1/1:78:1,77:1:36:77:2764:-245.398,-19.8821,0	1/1:68:0,68:0:0:68:2429:-218.859,-20.47,0	1/1:132:0,132:0:0:132:4630:-416.862,-39.736,0	1/1:114:1,113:1:21:113:3992:-357.354,-32.2175,0	1/1:26:0,26:0:0:26:887:-80.1361,-7.82678,0	1/1:32:0,32:0:0:32:1137:-102.637,-9.63296,0	0/1:76:37,39:37:1324:39:1381:-101.708,0,-96.5838	1/1:57:0,57:0:0:57:2048:-184.592,-17.1587,0	0/1:187:100,87:100:3566:87:3056:-218.97,0,-264.784	1/1:216:0,216:0:0:216:7681:-691.229,-65.0225,0	0/1:42:22,20:22:777:20:720:-52.4855,0,-57.5562	1/1:180:0,180:0:0:180:6393:-575.456,-54.1854,0	1/1:48:1,47:1:36:47:1673:-147.257,-10.8512,0	0/1:80:34,46:34:1205:46:1641:-123.894,0,-84.6715	0/1:6:3,3:3:108:3:93:-6.86813,0,-8.26899	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.86629	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:15:6,9:6:216:9:324:-24.9904,0,-15.2751	1/1:252:0,252:0:0:252:8984:-808.523,-75.8596,0	1/1:62:0,62:0:0:62:2202:-198.429,-18.6639,0	1/1:84:0,84:0:0:84:3017:-271.76,-25.2865,0	1/1:5:0,5:0:0:5:165:-15.1736,-1.50515,0	0/1:117:48,69:48:1724:69:2450:-185.531,0,-120.225	0/1:48:26,22:26:921:22:788:-56.7954,0,-68.7558	1/1:111:0,111:0:0:111:3909:-351.982,-33.4143,0	1/1:116:0,116:0:0:116:4142:-372.957,-34.9195,0	1/1:84:0,84:0:0:84:2978:-268.165,-25.2865,0	1/1:46:0,46:0:0:46:1639:-147.798,-13.8474,0	1/1:94:0,94:0:0:94:3357:-302.3,-28.2968,0	0/1:138:87,51:87:3113:51:1806:-121.275,0,-238.767	1/1:58:0,58:0:0:58:2080:-187.47,-17.4597,0	1/1:143:0,143:0:0:143:4944:-445.104,-43.0473,0	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	1/1:13:0,13:0:0:13:453:-41.0996,-3.91339,0	0/1:86:49,37:49:1741:37:1283:-89.876,0,-131.079	1/1:28:0,28:0:0:28:981:-88.601,-8.42884,0	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:98:48,50:48:1671:50:1766:-129.701,0,-120.9	1/1:41:0,41:0:0:41:1453:-131.064,-12.3422,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:65:0,65:0:0:65:2325:-209.508,-19.567,0	1/1:122:0,122:0:0:122:4384:-394.732,-36.7257,0	1/1:14:0,14:0:0:14:500:-45.3362,-4.21442,0	1/1:92:0,92:0:0:92:3236:-291.458,-27.6948,0	1/1:154:2,152:2:72:152:5410:-479.566,-39.5219,0	0/1:65:22,43:22:792:43:1503:-115.941,0,-52.0295	1/1:69:0,69:0:0:69:2465:-222.102,-20.7711,0	1/1:77:0,77:0:0:77:2749:-246.869,-23.1793,0	1/1:62:1,61:1:36:61:2128:-188.183,-15.0656,0	1/1:48:1,47:1:36:47:1673:-147.257,-10.8512,0	1/1:50:0,50:0:0:50:1751:-157.868,-15.0515,0	1/1:130:1,129:1:36:129:4582:-408.923,-35.5356,0	0/0:12:11,1:11:396:1:36:0,-0.0140849,-32.3821	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	0/1:78:41,37:41:1476:37:1287:-92.5137,0,-108.794	1/1:161:0,161:0:0:161:5730:-515.817,-48.4658,0	1/1:84:0,84:0:0:84:3023:-272.3,-25.2865,0	0/1:85:35,50:35:1260:50:1765:-133.542,0,-88.1179	1/1:92:0,92:0:0:92:3230:-290.919,-27.6948,0	1/1:14:0,14:0:0:14:470:-42.6176,-4.21442,0	1/1:71:0,71:0:0:71:2503:-225.387,-21.3731,0	0/1:99:47,52:47:1673:52:1829:-135.083,0,-121.049	1/1:172:0,172:0:0:172:6029:-542.343,-51.7772,0	1/1:95:0,95:0:0:95:3359:-302.438,-28.5979,0	1/1:85:0,85:0:0:85:3048:-274.549,-25.5876,0	1/1:114:0,114:0:0:114:4092:-368.46,-34.3174,0	1/1:177:0,177:0:0:177:6348:-571.323,-53.2823,0	1/1:55:0,55:0:0:55:1976:-178.115,-16.5567,0	0/1:83:36,47:36:1296:47:1673:-125.869,0,-91.9584	0/1:80:41,39:41:1476:39:1370:-99.5071,0,-109.054	1/1:63:0,63:0:0:63:2241:-201.952,-18.9649,0	0/1:115:51,64:51:1836:64:2296:-172.273,0,-130.902	0/1:69:48,21:48:1728:21:733:-45.5186,0,-135.034	1/1:104:0,104:0:0:104:3684:-331.72,-31.3071,0	1/1:151:0,151:0:0:151:5345:-481.179,-45.4555,0
chr08	12050135	.	CGCCC	GGCCC,GGCCT	309842	PASS	AB=0.532184,0.462747;ABP=20.7618,26.793;AC=166,22;AF=0.882979,0.117021;AN=188;AO=10184,918;CIGAR=1X4M,1X3M1X;DP=11162;DPB=11167;DPRA=0,0.794485;EPP=1674.69,971.894;EPPR=4.45795;GTI=2;LEN=1,5;MEANALT=1.79787,2.44444;MQM=59.9584,59.6721;MQMR=60;NS=94;NUMALT=2;ODDS=2.59556;PAIRED=0,0;PAIREDR=0;PAO=3,15;PQA=65.5,514;PQR=65.5;PRO=3;QA=362292,31187;QR=181;RO=6;RPL=54,22;RPP=21650.7,1809.91;RPPR=8.80089;RPR=10130,896;RUN=1,1;SAF=6546,801;SAP=1806.13,1109.69;SAR=3638,117;SRF=5;SRP=8.80089;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:31:0,31,0:0:0:31,0:1088,0:-98.2268,-9.33193,0,-98.2268,-9.33193,-98.2268	1/1:78:0,78,0:0:0:78,0:2777,0:-250.169,-23.4803,0,-250.169,-23.4803,-250.169	1/1:120:0,120,0:0:0:120,0:4258,0:-383.358,-36.1236,0,-383.358,-36.1236,-383.358	1/1:252:1,249,0:1:30:249,0:8823,0:-791.048,-72.5662,0,-791.349,-74.9565,-793.747	1/1:51:0,51,0:0:0:51,0:1832,0:-165.159,-15.3525,0,-165.159,-15.3525,-165.159	1/1:49:0,49,0:0:0:49,0:1756,0:-158.324,-14.7505,0,-158.324,-14.7505,-158.324	1/1:164:0,163,1:0:0:163,1:5804,29:-522.183,-49.0679,0,-519.875,-46.4693,-519.574	1/1:125:0,124,0:0:0:124,0:4427,0:-398.292,-37.3277,0,-398.292,-37.3277,-398.292	1/1:92:0,90,1:0:0:90,1:3183,36:-286.328,-27.0927,0,-283.391,-24.1553,-283.09	1/1:140:0,140,0:0:0:140,0:4994,0:-449.61,-42.1442,0,-449.61,-42.1442,-449.61	1/1:122:0,121,0:0:0:121,0:4320,0:-388.646,-36.4246,0,-388.646,-36.4246,-388.646	1/1:84:0,84,0:0:0:84,0:3003,0:-270.501,-25.2865,0,-270.501,-25.2865,-270.501	1/1:77:1,76,0:1:25:76,0:2720,0:-242.544,-20.6794,0,-242.845,-22.8783,-244.792	1/1:87:0,87,0:0:0:87,0:3112,0:-280.307,-26.1896,0,-280.307,-26.1896,-280.307	1/1:145:0,145,0:0:0:145,0:5204,0:-468.497,-43.6494,0,-468.497,-43.6494,-468.497	1/1:65:0,65,0:0:0:65,0:2308,0:-207.977,-19.567,0,-207.977,-19.567,-207.977	1/1:86:0,86,0:0:0:86,0:3081,0:-277.499,-25.8886,0,-277.499,-25.8886,-277.499	1/1:77:1,75,0:1:35:75,0:2696,0:-239.38,-19.7342,0,-239.681,-22.5773,-242.529	1/1:68:0,68,0:0:0:68,0:2416,0:-217.685,-20.47,0,-217.685,-20.47,-217.685	1/1:328:0,326,0:0:0:326,0:11586,0:-1042.26,-98.1358,0,-1042.26,-98.1358,-1042.26	1/1:111:0,111,0:0:0:111,0:3962,0:-356.448,-33.4143,0,-356.448,-33.4143,-356.448	1/1:70:0,70,0:0:0:70,0:2476,0:-223.092,-21.0721,0,-223.092,-21.0721,-223.092	1/1:84:0,84,0:0:0:84,0:2974,0:-267.891,-25.2865,0,-267.891,-25.2865,-267.891	1/2:77:0,40,37:0:0:40,37:1421,1272:-219.044,-103.25,-91.2091,-115.756,0,-104.618	1/1:56:0,55,0:0:0:55,0:1938,0:-174.333,-16.5567,0,-174.333,-16.5567,-174.333	1/2:415:0,196,216:0:0:196,216:6915,7338:-1158.2,-595.127,-536.125,-563.142,0,-498.12	1/1:211:0,209,0:0:0:209,0:7481,0:-672.952,-62.9153,0,-672.952,-62.9153,-672.952	1/2:43:0,22,21:0:0:22,21:792,702:-121.795,-57.1584,-50.5357,-64.983,0,-58.6614	1/1:369:0,367,0:0:0:367,0:12904,0:-1160.93,-110.478,0,-1160.93,-110.478,-1160.93	1/1:48:0,47,1:0:0:47,1:1673,36:-150.496,-14.1484,0,-147.558,-10.8512,-147.257	1/2:120:0,85,34:0:0:85,34:3028,1185:-343.322,-96.5055,-70.918,-246.952,0,-236.717	1/2:5:0,2,3:0:0:2,3:72,107:-14.9552,-9.07908,-8.47702,-6.23466,0,-5.33157	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:4:0,1,3:0:0:1,3:36,98:-11.1855,-8.23972,-7.93869,-3.29724,0,-2.39415	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/2:14:0,8,6:0:0:8,6:288,207:-40.3102,-16.804,-14.3958,-23.4994,0,-21.6932	1/1:407:0,404,0:0:0:404,0:14451,0:-1300.03,-121.616,0,-1300.03,-121.616,-1300.03	1/1:62:0,62,0:0:0:62,0:2209,0:-199.052,-18.6639,0,-199.052,-18.6639,-199.052	1/1:84:0,84,0:0:0:84,0:3016,0:-271.67,-25.2865,0,-271.67,-25.2865,-271.67	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:115:0,66,49:0:0:66,49:2364,1657:-327.103,-134.3,-114.432,-192.791,0,-178.04	1/2:47:0,22,25:0:0:22,25:788,819:-130.406,-66.128,-59.5054,-64.263,0,-56.7373	1/1:108:0,107,0:0:0:107,0:3827,0:-344.249,-32.2102,0,-344.249,-32.2102,-344.249	1/1:192:0,191,0:0:0:191,0:6836,0:-614.946,-57.4967,0,-614.946,-57.4967,-614.946	1/1:137:0,136,0:0:0:136,0:4832,0:-434.699,-40.9401,0,-434.699,-40.9401,-434.699	1/1:96:1,95,0:1:26:95,0:3358,0:-299.839,-26.2991,0,-300.14,-28.5979,-302.178	1/1:93:0,90,0:0:0:90,0:3206,0:-288.405,-27.0927,0,-288.405,-27.0927,-288.405	1/2:214:0,127,87:0:0:127,87:4528,2957:-608.925,-239.814,-201.584,-369.098,0,-342.908	1/1:126:0,126,0:0:0:126,0:4496,0:-404.81,-37.9298,0,-404.81,-37.9298,-404.81	1/1:252:0,252,0:0:0:252,0:8977,0:-807.913,-75.8596,0,-807.913,-75.8596,-807.913	1/1:147:0,145,0:0:0:145,0:5021,0:-451.682,-43.6494,0,-451.682,-43.6494,-451.682	1/1:19:0,19,0:0:0:19,0:676,0:-61.168,-5.71957,0,-61.168,-5.71957,-61.168	1/2:85:1,35,49:1:29:35,49:1260,1697:-238.22,-135.705,-127.477,-100.611,0,-88.1674	1/1:50:0,49,0:0:0:49,0:1730,0:-155.624,-14.7505,0,-155.624,-14.7505,-155.624	1/2:11:0,6,5:0:0:6,5:216,165:-31.3096,-13.6688,-11.8626,-17.9843,0,-16.4792	1/2:100:0,51,49:0:0:51,49:1828,1660:-283.097,-134.014,-118.662,-149.073,0,-134.323	1/1:91:0,91,0:0:0:91,0:3232,0:-291.104,-27.3937,0,-291.104,-27.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chr08	12875872	.	GATA	AATG,AATA	179457	PASS	AB=0.519243,0.479536;ABP=8.27516,8.96494;AC=166,22;AF=0.882979,0.117021;AN=188;AO=7312,797;CIGAR=1X2M1X,1X3M;DP=8126;DPB=8126;DPRA=0,1.10403;EPP=15880.8,1733.67;EPPR=0;GTI=0;LEN=4,1;MEANALT=1.47872,2.21429;MQM=53.1525,53.3212;MQMR=0;NS=94;NUMALT=2;ODDS=4.81616;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=259497,28578;QR=0;RO=0;RPL=0,0;RPP=15880.8,1733.67;RPPR=0;RPR=7312,797;RUN=1,1;SAF=7312,797;SAP=15880.8,1733.67;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:67:0,67,0:0:0:67,0:2383,0:-214.107,-20.169,0,-214.107,-20.169,-214.107	1/1:128:0,128,0:0:0:128,0:4567,0:-410.104,-38.5318,0,-410.104,-38.5318,-410.104	1/1:119:0,119,0:0:0:119,0:4208,0:-378.011,-35.8226,0,-378.011,-35.8226,-378.011	1/1:137:0,137,0:0:0:137,0:4868,0:-436.742,-41.2411,0,-436.742,-41.2411,-436.742	1/1:76:0,76,0:0:0:76,0:2692,0:-241.73,-22.8783,0,-241.73,-22.8783,-241.73	1/1:58:0,58,0:0:0:58,0:2044,0:-183.241,-17.4597,0,-183.241,-17.4597,-183.241	1/1:119:0,119,0:0:0:119,0:4206,0:-376.283,-35.8226,0,-376.283,-35.8226,-376.283	1/1:209:0,208,1:0:0:208,1:7366,36:-659.584,-62.6142,0,-656.651,-59.3221,-656.35	1/1:122:0,122,0:0:0:122,0:4310,0:-384.685,-36.7257,0,-384.685,-36.7257,-384.685	1/1:65:0,65,0:0:0:65,0:2293,0:-205.756,-19.567,0,-205.756,-19.567,-205.756	1/1:22:0,22,0:0:0:22,0:785,0:-70.8768,-6.62266,0,-70.8768,-6.62266,-70.8768	1/1:42:0,42,0:0:0:42,0:1500,0:-134.537,-12.6433,0,-134.537,-12.6433,-134.537	1/1:39:0,39,0:0:0:39,0:1391,0:-124.919,-11.7402,0,-124.919,-11.7402,-124.919	1/1:34:0,34,0:0:0:34,0:1214,0:-109.245,-10.235,0,-109.245,-10.235,-109.245	1/1:54:0,54,0:0:0:54,0:1914,0:-172.118,-16.2556,0,-172.118,-16.2556,-172.118	1/1:39:0,39,0:0:0:39,0:1380,0:-124.331,-11.7402,0,-124.331,-11.7402,-124.331	1/1:26:0,26,0:0:0:26,0:931,0:-82.9785,-7.82678,0,-82.9785,-7.82678,-82.9785	1/1:34:0,34,0:0:0:34,0:1208,0:-108.603,-10.235,0,-108.603,-10.235,-108.603	1/1:16:0,16,0:0:0:16,0:539,0:-48.7275,-4.81648,0,-48.7275,-4.81648,-48.7275	1/1:225:0,224,0:0:0:224,0:7975,0:-713.777,-67.4307,0,-713.777,-67.4307,-713.777	1/1:197:0,197,0:0:0:197,0:6980,0:-626.697,-59.3029,0,-626.697,-59.3029,-626.697	1/1:160:0,160,0:0:0:160,0:5679,0:-509.458,-48.1648,0,-509.458,-48.1648,-509.458	1/1:86:0,85,0:0:0:85,0:3040,0:-272.04,-25.5876,0,-272.04,-25.5876,-272.04	1/2:146:0,73,72:0:0:73,72:2590,2588:-419.833,-210.464,-188.489,-209.381,0,-187.707	1/1:83:0,83,0:0:0:83,0:2952,0:-264.759,-24.9855,0,-264.759,-24.9855,-264.759	1/2:334:0,171,163:0:0:171,163:6042,5846:-966.199,-475.742,-424.266,-490.812,0,-441.744	1/1:220:0,220,0:0:0:220,0:7831,0:-702.696,-66.2266,0,-702.696,-66.2266,-702.696	1/2:18:0,10,8:0:0:10,8:348,284:-51.7108,-23.4607,-20.4504,-28.6014,0,-26.1931	1/1:239:0,239,0:0:0:239,0:8482,0:-760.784,-71.9462,0,-760.784,-71.9462,-760.784	1/1:144:0,143,1:0:0:143,1:5043,36:-451.554,-43.0473,0,-448.621,-39.7551,-448.32	1/2:94:0,35,59:0:0:35,59:1251,2124:-274.789,-172.942,-162.406,-102.204,0,-84.4435	1/2:7:0,3,4:0:0:3,4:101,144:-20.1,-11.9338,-11.0307,-8.51053,0,-7.30641	1/1:26:0,26,0:0:0:26,0:924,0:-82.7763,-7.82678,0,-82.7763,-7.82678,-82.7763	1/2:7:0,2,5:0:0:2,5:72,180:-20.8891,-15.0234,-14.4214,-6.22497,0,-4.71982	1/1:5:0,5,0:0:0:5,0:180,0:-16.5286,-1.50515,0,-16.5286,-1.50515,-16.5286	1/2:11:0,7,4:0:0:7,4:246,144:-31.9531,-12.0906,-9.98341,-20.218,0,-19.0139	1/1:138:0,138,0:0:0:138,0:4897,0:-438.493,-41.5421,0,-438.493,-41.5421,-438.493	1/1:220:0,220,0:0:0:220,0:7776,0:-697.563,-66.2266,0,-697.563,-66.2266,-697.563	1/1:26:0,26,0:0:0:26,0:936,0:-84.2863,-7.82678,0,-84.2863,-7.82678,-84.2863	1/1:5:0,5,0:0:0:5,0:169,0:-15.5073,-1.50515,0,-15.5073,-1.50515,-15.5073	1/2:93:0,52,41:0:0:52,41:1853,1471:-269.701,-119.579,-103.925,-150.477,0,-138.135	1/2:16:0,7,9:0:0:7,9:252,305:-45.0303,-24.4885,-22.3813,-20.8891,0,-18.1798	1/1:115:0,115,0:0:0:115,0:4063,0:-364.226,-34.6185,0,-364.226,-34.6185,-364.226	1/1:35:0,35,0:0:0:35,0:1243,0:-111.42,-10.5361,0,-111.42,-10.5361,-111.42	1/1:44:0,44,0:0:0:44,0:1572,0:-141.499,-13.2453,0,-141.499,-13.2453,-141.499	1/1:84:0,84,0:0:0:84,0:2989,0:-268.673,-25.2865,0,-268.673,-25.2865,-268.673	1/1:180:0,179,0:0:0:179,0:6379,0:-569.313,-53.8844,0,-569.313,-53.8844,-569.313	1/2:152:0,71,81:0:0:71,81:2527,2912:-442.02,-237.26,-215.887,-205.116,0,-180.732	1/1:123:0,123,0:0:0:123,0:4374,0:-392.795,-37.0267,0,-392.795,-37.0267,-392.795	1/1:162:0,161,0:0:0:161,0:5721,0:-513.491,-48.4658,0,-513.491,-48.4658,-513.491	1/1:182:0,179,2:0:0:179,2:6353,72:-569.793,-53.8844,0,-563.927,-48.0074,-563.325	1/1:5:0,5,0:0:0:5,0:180,0:-16.5286,-1.50515,0,-16.5286,-1.50515,-16.5286	1/2:132:0,79,53:0:0:79,53:2801,1904:-382.387,-155.136,-131.355,-227.607,0,-211.653	1/1:15:0,15,0:0:0:15,0:538,0:-48.6883,-4.51545,0,-48.6883,-4.51545,-48.6883	1/2:11:0,5,6:0:0:5,6:176,216:-32.2605,-17.9563,-16.4511,-14.6592,0,-12.853	1/2:112:0,67,45:0:0:67,45:2382,1588:-321.946,-128.892,-108.723,-193.407,0,-179.86	1/1:19:0,18,0:0:0:18,0:623,0:-55.922,-5.41854,0,-55.922,-5.41854,-55.922	1/1:4:0,4,0:0:0:4,0:144,0:-13.2947,-1.20412,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chr08	12875891	.	C	G	12628	PASS	AB=0.480173;ABP=8.52105;AC=22;AF=0.117021;AN=188;AO=788;CIGAR=1X;DP=8039;DPB=8039;DPRA=1.18483;EPP=1714.13;EPPR=15715.8;GTI=0;LEN=1;MEANALT=1.03448;MQM=53.2805;MQMR=53.1823;NS=94;NUMALT=1;ODDS=4.74999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=28262;QR=259504;RO=7248;RPL=788;RPP=1714.13;RPPR=15715.8;RPR=0;RUN=1;SAF=788;SAP=1714.13;SAR=0;SRF=7248;SRP=15741.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.167	0/0:128:128,0:128:4596:0:0:0,-38.5318,-412.569	0/0:117:117,0:117:4172:0:0:0,-35.2205,-374.103	0/0:137:137,0:137:4907:0:0:0,-41.2411,-439.737	0/0:75:75,0:75:2672:0:0:0,-22.5772,-239.891	0/0:58:58,0:58:2084:0:0:0,-17.4597,-186.063	0/0:118:118,0:118:4224:0:0:0,-35.5215,-378.076	0/0:206:205,1:205:7347:1:36:0,-58.419,-654.487	0/0:120:120,0:120:4299:0:0:0,-36.1236,-383.088	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.263	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.146	0/0:43:43,0:43:1548:0:0:0,-12.9443,-138.844	0/0:39:39,0:39:1389:0:0:0,-11.7402,-124.338	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.139	0/0:55:55,0:55:1980:0:0:0,-16.5566,-177.99	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.246	0/0:26:26,0:26:936:0:0:0,-7.82678,-83.4262	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.111	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.0671	0/0:224:224,0:224:8020:0:0:0,-67.4307,-718.706	0/0:193:193,0:193:6919:0:0:0,-58.0988,-621.014	0/0:155:155,0:155:5547:0:0:0,-46.6596,-497.482	0/0:86:86,0:86:3066:0:0:0,-25.8886,-274.402	0/1:143:72,71:72:2572:71:2552:-186.147,0,-186.69	0/0:83:83,0:83:2952:0:0:0,-24.9855,-264.723	0/1:327:168,159:168:6007:159:5712:-414.231,0,-440.353	0/0:219:219,0:219:7852:0:0:0,-65.9256,-704.239	0/1:18:10,8:10:356:8:288:-20.8116,0,-26.9191	0/0:236:236,0:236:8465:0:0:0,-71.0431,-759.085	0/0:142:141,1:141:5028:1:36:0,-39.1531,-447.278	0/1:94:35,59:35:1256:59:2120:-162.049,0,-84.89	0/1:7:3,4:3:108:4:144:-11.0307,0,-7.95367	0/0:25:25,0:25:900:0:0:0,-7.52575,-80.2125	0/1:7:2,5:2:72:5:180:-14.4214,0,-4.71982	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5286	0/1:11:7,4:7:248:4:144:-9.98341,0,-19.2533	0/0:135:135,0:135:4819:0:0:0,-40.639,-431.063	0/0:219:218,1:218:7818:1:36:0,-62.502,-697.298	0/0:26:26,0:26:932:0:0:0,-7.82678,-83.9285	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.3726	0/1:93:52,41:52:1868:41:1457:-101.973,0,-139.473	0/1:16:7,9:7:252:9:324:-22.8406,0,-18.1798	0/0:114:114,0:114:4088:0:0:0,-34.3174,-366.19	0/0:35:35,0:35:1241:0:0:0,-10.536,-111.246	0/0:44:44,0:44:1562:0:0:0,-13.2453,-140.672	0/0:84:84,0:84:3012:0:0:0,-25.2865,-270.387	0/0:176:176,0:176:6307:0:0:0,-52.9813,-562.759	0/1:150:70,80:70:2507:80:2876:-213.492,0,-179.584	0/0:123:123,0:123:4400:0:0:0,-37.0267,-394.998	0/0:161:161,0:161:5776:0:0:0,-48.4658,-518.548	0/0:181:179,2:179:6416:2:72:0,-47.6594,-568.538	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5286	0/1:131:77,54:77:2768:54:1944:-135.247,0,-209.006	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6333	0/1:10:5,5:5:180:5:180:-13.5183,0,-13.5183	0/1:111:68,43:68:2412:43:1548:-104.854,0,-181.945	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.1372	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.2947	0/0:15:14,0:14:504:0:0:0,-4.21442,-45.3311	0/0:67:67,0:67:2412:0:0:0,-20.169,-217.028	0/0:87:85,2:85:3048:2:72:0,-19.3626,-266.311	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.2947	0/0:146:146,0:146:5223:0:0:0,-43.9504,-468.262	0/0:228:222,5:222:7941:5:180:0,-52.14,-695.496	0/1:79:53,26:53:1888:26:921:-59.3084,0,-146.118	0/0:69:69,0:69:2484:0:0:0,-20.7711,-223.153	0/0:180:180,0:180:6451:0:0:0,-54.1854,-577.695	0/0:120:120,0:120:4320:0:0:0,-36.1236,-386.236	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.446	0/0:74:74,0:74:2642:0:0:0,-22.2762,-236.539	0/0:50:49,0:49:1760:0:0:0,-14.7505,-157.497	0/1:15:8,7:8:288:7:238:-17.1993,0,-21.7147	0/0:106:106,0:106:3783:0:0:0,-31.9092,-338.862	0/1:75:31,44:31:1108:44:1584:-119.619,0,-76.9513	0/0:133:133,0:133:4730:0:0:0,-40.037,-424.511	0/0:155:155,0:155:5544:0:0:0,-46.6596,-496.832	0/1:120:71,49:71:2552:49:1764:-122.232,0,-193.072	0/0:103:102,1:102:3643:1:36:0,-27.4129,-323.383	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.3995	0/0:128:128,0:128:4596:0:0:0,-38.5318,-412.607	0/1:61:33,28:33:1184:28:1004:-72.1796,0,-87.879	0/0:275:275,0:275:9842:0:0:0,-82.7832,-881.515	0/0:59:59,0:59:2120:0:0:0,-17.7608,-189.202	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.1965	0/0:36:36,0:36:1288:0:0:0,-10.8371,-115.684	0/0:80:80,0:80:2859:0:0:0,-24.0824,-255.863	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.5687	0/1:41:19,22:19:680:22:779:-57.9937,0,-48.6822	0/1:41:18,23:18:644:23:819:-61.5872,0,-45.4073	0/0:11:11,0:11:383:0:0:0,-3.31133,-34.7591	0/1:40:23,17:23:828:17:608:-42.786,0,-62.615	0/1:24:7,17:7:252:17:608:-47.68,0,-15.7716	0/0:71:71,0:71:2524:0:0:0,-21.3731,-226.716	0/0:56:56,0:56:2016:0:0:0,-16.8577,-181.019
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chr08	18734574	.	G	A	48724.1	PASS	AB=0.472747;ABP=32.7182;AC=22;AF=0.117021;AN=188;AO=2209;CIGAR=1X;DP=21069;DPB=21069;DPRA=1.17267;EPP=4791.11;EPPR=40887.5;GTI=0;LEN=1;MEANALT=1.12121;MQM=59.9484;MQMR=59.9773;NS=94;NUMALT=1;ODDS=16.6355;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=78616;QR=668935;RO=18844;RPL=965;RPP=79.5289;RPPR=889.746;RPR=1244;RUN=1;SAF=964;SAP=80.6299;SAR=1245;SRF=8031;SRP=894.868;SRR=10813;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:67:67,0:67:2373:0:0:0,-20.169,-213.827	0/0:331:331,0:331:11784:0:0:0,-99.6409,-1060.06	0/0:465:464,1:464:16555:1:32:0,-136.78,-1486.41	0/0:490:490,0:490:17423:0:0:0,-147.505,-1567.7	0/0:192:186,5:186:6609:5:180:0,-41.3045,-578.34	0/0:80:80,0:80:2826:0:0:0,-24.0824,-254.58	0/0:250:250,0:250:8896:0:0:0,-75.2575,-800.626	0/0:435:435,0:435:15377:0:0:0,-130.948,-1383.66	0/0:211:211,0:211:7415:0:0:0,-63.5173,-667.357	0/0:199:199,0:199:7054:0:0:0,-59.905,-634.924	0/0:194:194,0:194:6838:0:0:0,-58.3998,-615.495	0/0:203:203,0:203:7203:0:0:0,-61.1091,-648.138	0/0:142:142,0:142:5058:0:0:0,-42.7463,-455.367	0/0:187:187,0:187:6576:0:0:0,-56.2926,-591.932	0/0:107:107,0:107:3824:0:0:0,-32.2102,-344.358	0/0:160:160,0:160:5655:0:0:0,-48.1648,-509.073	0/0:147:147,0:147:5222:0:0:0,-44.2514,-470.119	0/0:93:93,0:93:3332:0:0:0,-27.9958,-300.097	0/0:86:86,0:86:3060:0:0:0,-25.8886,-275.631	0/0:522:522,0:522:18519:0:0:0,-157.138,-1666.3	0/0:243:243,0:243:8597:0:0:0,-73.1503,-773.736	0/0:172:172,0:172:6131:0:0:0,-51.7772,-551.893	0/0:136:136,0:136:4824:0:0:0,-40.9401,-434.309	0/1:240:164,76:164:5776:76:2722:-172.974,0,-447.714	0/0:200:200,0:200:7079:0:0:0,-60.206,-637.173	0/1:557:289,268:289:10259:268:9487:-686.073,0,-755.564	0/0:597:597,0:597:21306:0:0:0,-179.715,-1917	0/1:84:42,42:42:1504:42:1499:-109.914,0,-110.368	0/0:597:596,0:596:21153:0:0:0,-179.414,-1902.89	0/0:209:195,14:195:6918:14:504:0,-17.2172,-576.991	0/1:237:114,123:114:3991:123:4339:-319.343,0,-288.036	0/1:21:13,8:13:464:8:279:-19.1259,0,-35.7759	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/1:13:7,6:7:252:6:207:-15.0535,0,-19.1156	0/0:20:20,0:20:703:0:0:0,-6.0206,-63.5935	0/1:46:27,19:27:972:19:684:-48.0429,0,-73.9505	0/0:410:410,0:410:14553:0:0:0,-123.422,-1309.51	0/0:237:237,0:237:8430:0:0:0,-71.3441,-757.217	0/0:148:148,0:148:5260:0:0:0,-44.5524,-473.53	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:332:175,157:175:6184:157:5592:-403.439,0,-456.588	0/1:94:46,48:46:1643:48:1712:-126.069,0,-119.861	0/0:410:410,0:410:14560:0:0:0,-123.422,-1310.15	0/0:170:170,0:170:6046:0:0:0,-51.1751,-544.24	0/0:147:147,0:147:5248:0:0:0,-44.2514,-472.459	0/0:128:126,0:126:4452:0:0:0,-37.9298,-400.494	0/0:335:335,0:335:11891:0:0:0,-100.845,-1070.05	0/1:428:218,210:218:7780:210:7444:-541.156,0,-571.388	0/0:251:251,0:251:8862:0:0:0,-75.5585,-797.571	0/0:353:352,1:352:12471:1:36:0,-102.665,-1118.57	0/0:399:398,0:398:14146:0:0:0,-119.81,-1272.55	0/0:48:48,0:48:1684:0:0:0,-14.4494,-151.844	0/1:373:207,166:207:7379:166:5899:-418.738,0,-551.874	0/0:117:116,0:116:4148:0:0:0,-34.9195,-373.144	0/1:28:14,14:14:500:14:504:-37.2693,0,-36.9073	0/1:307:169,138:169:6016:138:4943:-352.603,0,-449.13	0/0:86:86,0:86:3048:0:0:0,-25.8886,-274.549	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/0:37:37,0:37:1304:0:0:0,-11.1381,-117.659	0/0:168:168,0:168:5957:0:0:0,-50.573,-536.108	0/0:246:245,1:245:8665:1:36:0,-70.4551,-776.224	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:389:389,0:389:13874:0:0:0,-117.101,-1248.44	0/0:524:520,3:520:18406:3:108:0,-147.723,-1646.06	0/1:169:114,55:114:4073:55:1964:-126.161,0,-315.881	0/0:251:250,0:250:8910:0:0:0,-75.2575,-801.253	0/0:343:341,2:341:12066:2:48:0,-98.6935,-1081.24	0/0:266:264,2:264:9426:2:72:0,-73.2373,-841.464	0/0:134:134,0:134:4754:0:0:0,-40.338,-428.014	0/0:206:204,0:204:7247:0:0:0,-61.4101,-651.925	0/0:162:162,0:162:5754:0:0:0,-48.7669,-517.977	0/1:58:41,17:41:1468:17:595:-36.4169,0,-114.956	0/0:253:252,0:252:8953:0:0:0,-75.8596,-805.544	0/1:262:129,133:129:4571:133:4776:-351.125,0,-332.598	0/0:309:309,0:309:10934:0:0:0,-93.0183,-983.959	0/0:442:441,0:441:15750:0:0:0,-132.754,-1416.84	0/1:332:183,149:183:6493:149:5284:-375.754,0,-484.513	0/0:368:366,1:366:12946:1:36:0,-107.24,-1161.18	0/0:38:38,0:38:1348:0:0:0,-11.4391,-121.62	0/0:322:320,1:320:11330:1:36:0,-93.3922,-1015.99	0/1:223:116,107:116:4115:107:3813:-276.237,0,-303.408	0/0:581:581,0:581:20612:0:0:0,-174.898,-1854.09	0/0:152:152,0:152:5370:0:0:0,-45.7566,-483.436	0/0:159:158,0:158:5610:0:0:0,-47.5627,-504.664	0/0:134:134,0:134:4704:0:0:0,-40.338,-423.525	0/0:237:237,0:237:8403:0:0:0,-71.3441,-756.278	0/0:62:62,0:62:2204:0:0:0,-18.6639,-198.623	0/1:167:81,86:81:2861:86:3082:-227.334,0,-207.453	0/1:179:94,85:94:3350:85:3025:-218.595,0,-247.832	0/0:112:111,0:111:3928:0:0:0,-33.4143,-353.355	0/1:275:130,145:130:4586:145:5186:-384.091,0,-330.125	0/1:180:55,125:55:1972:125:4456:-347.018,0,-123.569	0/0:285:284,1:284:10140:1:36:0,-82.1953,-908.848	0/0:232:232,0:232:8238:0:0:0,-69.839,-741.432
chr08	18888485	.	T	A	461502	PASS	AB=0.470722;ABP=32.3821;AC=166;AF=0.882979;AN=188;AO=16669;CIGAR=1X;DP=18806;DPB=18806;DPRA=0;EPP=36199.3;EPPR=4610.87;GTI=0;LEN=1;MEANALT=1.10638;MQM=59.8301;MQMR=59.9595;NS=94;NUMALT=1;ODDS=17.3244;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=583523;QR=75636;RO=2122;RPL=8518;RPP=20.5563;RPPR=33.284;RPR=8151;RUN=1;SAF=8518;SAP=20.5563;SAR=8151;SRF=975;SRP=33.284;SRR=1147;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:103:0,103:0:0:103:3594:-323.574,-31.0061,0	1/1:160:0,160:0:0:160:5508:-495.797,-48.1648,0	1/1:404:3,401:3:108:401:14059:-1254.6,-111.541,0	1/1:445:0,445:0:0:445:15613:-1403.96,-133.958,0	1/1:171:1,170:1:36:170:5974:-534.016,-47.8779,0	1/1:70:0,70:0:0:70:2380:-214.425,-21.0721,0	1/1:118:1,117:1:36:117:4122:-367.492,-31.9323,0	1/1:312:0,312:0:0:312:10984:-988.419,-93.9214,0	1/1:255:1,254:1:36:254:8831:-791.145,-73.1712,0	1/1:189:0,189:0:0:189:6698:-602.891,-56.8947,0	1/1:101:0,101:0:0:101:3554:-320.05,-30.404,0	1/1:255:0,255:0:0:255:8948:-805.278,-76.7627,0	1/1:168:0,168:0:0:168:5881:-529.304,-50.573,0	1/1:134:1,133:1:36:133:4625:-412.815,-36.7397,0	1/1:147:0,147:0:0:147:5149:-463.549,-44.2514,0	1/1:159:2,156:2:68:156:5442:-483.313,-41.4582,0	1/1:93:0,93:0:0:93:3216:-289.653,-27.9958,0	1/1:80:0,80:0:0:80:2792:-251.52,-24.0824,0	1/1:68:0,68:0:0:68:2373:-213.829,-20.47,0	1/1:579:1,578:1:32:578:20068:-1802.44,-171.097,0	1/1:344:0,344:0:0:344:12102:-1088.97,-103.554,0	1/1:262:0,262:0:0:262:9188:-826.897,-78.8699,0	1/1:241:0,241:0:0:241:8432:-758.893,-72.5482,0	0/1:166:65,101:65:2315:101:3521:-267.121,0,-158.639	1/1:167:0,167:0:0:167:5857:-527.247,-50.272,0	0/1:396:195,200:195:6959:200:7059:-516.108,0,-507.108	1/1:447:1,444:1:36:444:15561:-1396.54,-130.72,0	0/1:80:41,39:41:1476:39:1375:-99.9655,0,-109.054	1/1:567:1,566:1:36:566:19834:-1781.02,-167.086,0	1/1:267:10,257:10:360:257:9031:-780.013,-47.6307,0	0/1:266:141,125:141:5029:125:4397:-315.833,0,-372.683	0/1:26:14,12:14:491:12:423:-30.5783,0,-36.6943	1/1:70:0,70:0:0:70:2472:-222.677,-21.0721,0	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	0/1:22:9,13:9:324:13:464:-35.4666,0,-22.8832	1/1:429:0,429:0:0:429:15034:-1352.77,-129.142,0	1/1:164:0,164:0:0:164:5736:-516.363,-49.3689,0	1/1:120:2,118:2:72:118:4130:-365.011,-29.2869,0	1/1:12:0,12:0:0:12:424:-38.4964,-3.61236,0	0/1:229:115,114:115:4073:114:4011:-292.227,0,-297.82	0/1:51:28,23:28:1008:23:807:-57.5966,0,-75.6838	1/1:501:0,498:0:0:498:17517:-1575.84,-149.913,0	1/1:115:0,115:0:0:115:4053:-364.946,-34.6185,0	1/1:128:0,128:0:0:128:4436:-399.417,-38.5318,0	1/1:236:0,236:0:0:236:8260:-743.411,-71.0431,0	1/1:263:0,263:0:0:263:9162:-824.393,-79.1709,0	0/1:438:236,202:236:8415:202:7138:-510.601,0,-625.502	1/1:257:0,257:0:0:257:9021:-811.871,-77.3647,0	1/1:214:0,213:0:0:213:7477:-672.451,-64.1194,0	1/1:232:0,232:0:0:232:8029:-722.611,-69.839,0	1/1:27:0,27:0:0:27:963:-86.9859,-8.12781,0	0/1:295:164,131:164:5847:131:4626:-327.689,0,-437.538	1/1:102:0,102:0:0:102:3532:-318.09,-30.7051,0	0/1:17:10,7:10:360:7:252:-17.9114,0,-27.6268	0/1:312:197,115:197:7032:115:4032:-269.151,0,-539.021	1/1:112:0,112:0:0:112:3902:-351.372,-33.7154,0	1/1:12:0,12:0:0:12:424:-38.4964,-3.61236,0	1/1:56:0,56:0:0:56:1934:-174.331,-16.8577,0	1/1:170:2,168:2:72:168:5922:-525.315,-44.3384,0	1/1:196:1,195:1:36:195:6862:-614.018,-55.4036,0	1/1:22:0,22:0:0:22:755:-68.2658,-6.62266,0	1/1:318:0,318:0:0:318:11102:-999.087,-95.7275,0	1/1:363:4,359:4:140:359:12490:-1111.02,-96.3293,0	0/1:136:63,73:63:2236:73:2506:-184.848,0,-160.558	1/1:181:0,181:0:0:181:6347:-571.329,-54.4864,0	1/1:240:0,240:0:0:240:8495:-764.551,-72.2472,0	1/1:214:1,213:1:36:213:7356:-657.643,-60.8221,0	1/1:94:0,93:0:0:93:3283:-295.312,-27.9958,0	1/1:103:0,103:0:0:103:3572:-321.68,-31.0061,0	1/1:91:1,90:1:36:90:3131:-277.563,-23.7955,0	0/1:69:36,33:36:1288:33:1165:-84.3816,0,-95.4525	1/1:171:0,168:0:0:168:5955:-535.592,-50.573,0	0/1:246:147,99:147:5256:99:3486:-239.871,0,-399.124	1/1:499:0,499:0:0:499:17429:-1568.08,-150.214,0	1/1:361:0,360:0:0:360:12580:-1131.77,-108.371,0	0/1:308:163,145:163:5852:145:5128:-368.932,0,-434.072	1/1:197:0,197:0:0:197:6876:-618.906,-59.3029,0	1/1:31:0,31:0:0:31:1081:-97.5829,-9.33193,0	1/1:257:0,257:0:0:257:9038:-813.393,-77.3647,0	0/1:171:79,92:79:2827:92:3177:-234.674,0,-203.178	1/1:672:0,672:0:0:672:23640:-2126.93,-202.292,0	1/1:124:1,123:1:36:123:4301:-383.754,-33.825,0	1/1:171:1,170:1:36:170:5987:-535.241,-47.8779,0	1/1:99:0,99:0:0:99:3436:-309.457,-29.802,0	1/1:273:1,272:1:36:272:9465:-848.205,-78.5829,0	1/1:42:0,42:0:0:42:1471:-132.676,-12.6433,0	0/1:186:87,99:87:3063:99:3463:-255.891,0,-219.908	0/1:163:84,78:84:2972:78:2715:-195.506,0,-218.625	1/1:74:0,73:0:0:73:2564:-230.645,-21.9752,0	0/1:186:91,95:91:3256:95:3334:-244.276,0,-237.269	0/1:176:117,59:117:4129:59:2014:-128.546,0,-318.114	1/1:246:0,246:0:0:246:8546:-769.127,-74.0534,0	1/1:278:0,278:0:0:278:9708:-873.691,-83.6863,0
chr08	18888536	.	ACCA	GCCG,GCCA	313120	PASS	AB=0.509997,0.489108;ABP=5.9192,6.46353;AC=166,22;AF=0.882979,0.117021;AN=188;AO=12453,1651;CIGAR=1X2M1X,1X3M;DP=14114;DPB=14122.5;DPRA=0,1.13228;EPP=27044.4,3588.11;EPPR=0;GTI=0;LEN=4,1;MEANALT=1.38298,2.10345;MQM=59.9847,59.9855;MQMR=0;NS=94;NUMALT=2;ODDS=13.6987;PAIRED=0,0;PAIREDR=0;PAO=34,0;PQA=1158,0;PQR=0;PRO=0;QA=442366,59032;QR=0;RO=0;RPL=0,0;RPP=27044.4,3588.11;RPPR=0;RPR=12453,1651;RUN=1,1;SAF=12453,1651;SAP=27044.4,3588.11;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:102:0,102,0:0:0:102,0:3633,0:-326.829,-30.7051,0,-326.829,-30.7051,-326.829	1/1:105:0,105,0:0:0:105,0:3718,0:-334.825,-31.6082,0,-334.825,-31.6082,-334.825	1/1:324:0,324,0:0:0:324,0:11469,0:-1032.1,-97.5337,0,-1032.1,-97.5337,-1032.1	1/1:391:0,390,1:0:0:390,1:13876,36:-1248.27,-117.402,0,-1245.33,-114.458,-1245.03	1/1:64:0,64,0:0:0:64,0:2268,0:-204.022,-19.2659,0,-204.022,-19.2659,-204.022	1/1:50:0,50,0:0:0:50,0:1771,0:-159.459,-15.0515,0,-159.459,-15.0515,-159.459	1/1:107:0,105,1:0:0:105,1:3679,36:-330.957,-31.6082,0,-328.02,-28.6707,-327.719	1/1:217:0,217,0:0:0:217,0:7629,0:-686.297,-65.3235,0,-686.297,-65.3235,-686.297	1/1:120:0,119,1:0:0:119,1:4226,32:-380.181,-35.8226,0,-377.603,-32.9243,-377.302	1/1:88:0,88,0:0:0:88,0:3119,0:-280.937,-26.4906,0,-280.937,-26.4906,-280.937	1/1:186:0,186,0:0:0:186,0:6599,0:-593.635,-55.9916,0,-593.635,-55.9916,-593.635	1/1:130:0,130,0:0:0:130,0:4616,0:-415.605,-39.1339,0,-415.605,-39.1339,-415.605	1/1:109:0,109,0:0:0:109,0:3907,0:-351.823,-32.8123,0,-351.823,-32.8123,-351.823	1/1:124:0,124,0:0:0:124,0:4413,0:-397.344,-37.3277,0,-397.344,-37.3277,-397.344	1/1:81:0,81,0:0:0:81,0:2883,0:-259.347,-24.3834,0,-259.347,-24.3834,-259.347	1/1:83:0,83,0:0:0:83,0:2970,0:-267.533,-24.9855,0,-267.533,-24.9855,-267.533	1/1:77:0,77,0:0:0:77,0:2731,0:-246.032,-23.1793,0,-246.032,-23.1793,-246.032	1/1:35:0,35,0:0:0:35,0:1250,0:-112.805,-10.5361,0,-112.805,-10.5361,-112.805	1/1:85:0,85,0:0:0:85,0:3010,0:-271.129,-25.5876,0,-271.129,-25.5876,-271.129	1/1:220:0,220,0:0:0:220,0:7855,0:-706.618,-66.2266,0,-706.618,-66.2266,-706.618	1/1:236:0,236,0:0:0:236,0:8409,0:-756.458,-71.0431,0,-756.458,-71.0431,-756.458	1/1:192:0,192,0:0:0:192,0:6825,0:-614.323,-57.7978,0,-614.323,-57.7978,-614.323	1/1:183:0,182,0:0:0:182,0:6480,0:-582.928,-54.7875,0,-582.928,-54.7875,-582.928	1/2:86:0,43,43:0:0:43,43:1531,1529:-249.74,-124.957,-112.013,-125.138,0,-112.194	1/1:200:0,200,0:0:0:200,0:7089,0:-638.077,-60.206,0,-638.077,-60.206,-638.077	1/2:434:0,220,214:0:0:220,214:7811,7658:-1260.92,-624.472,-558.245,-636.44,0,-572.02	1/1:514:0,514,0:0:0:514,0:18263,0:-1643.27,-154.729,0,-1643.27,-154.729,-1643.27	1/2:34:0,17,17:0:0:17,17:610,608:-99.6918,-49.9345,-44.817,-50.1153,0,-44.9978	1/1:437:0,437,0:0:0:437,0:15553,0:-1399.48,-131.55,0,-1399.48,-131.55,-1399.48	1/1:124:0,122,2:0:0:122,2:4340,72:-390.418,-36.7257,0,-384.543,-30.491,-383.941	1/2:161:0,82,79:0:0:82,79:2933,2820:-469.422,-230.258,-205.574,-239.521,0,-215.739	1/2:23:0,17,6:0:0:17,6:609,216:-67.6501,-17.9843,-12.8668,-50.0251,0,-48.2189	1/1:57:0,57,0:0:0:57,0:2034,0:-183.332,-17.1587,0,-183.332,-17.1587,-183.332	1/2:15:0,8,7:0:0:8,7:286,252:-44.2404,-20.9217,-18.5135,-23.6773,0,-21.5701	1/1:36:0,36,0:0:0:36,0:1274,0:-114.961,-10.8371,0,-114.961,-10.8371,-114.961	1/2:77:0,56,21:0:0:56,21:1970,752:-222.044,-61.6846,-44.8269,-160.716,0,-154.394	1/1:219:0,219,0:0:0:219,0:7802,0:-701.851,-65.9256,0,-701.851,-65.9256,-701.851	1/1:258:0,257,0:0:0:257,0:9156,0:-823.1,-77.3647,0,-823.1,-77.3647,-823.1	1/1:96:0,96,0:0:0:96,0:3423,0:-307.924,-28.8989,0,-307.924,-28.8989,-307.924	1/1:12:0,12,0:0:0:12,0:426,0:-38.6774,-3.61236,0,-38.6774,-3.61236,-38.6774	1/2:201:0,80,121:0:0:80,121:2830,4352:-585.928,-355.428,-331.346,-230.856,0,-194.431	1/2:51:0,21,30:0:0:21,30:752,1061:-148.097,-86.7685,-80.4468,-61.6848,0,-52.6539	1/1:232:0,232,0:0:0:232,0:8242,0:-741.797,-69.839,0,-741.797,-69.839,-741.797	1/1:76:0,76,0:0:0:76,0:2712,0:-244.324,-22.8783,0,-244.324,-22.8783,-244.324	1/1:69:0,69,0:0:0:69,0:2453,0:-220.676,-20.7711,0,-220.676,-20.7711,-220.676	1/1:195:0,195,0:0:0:195,0:6914,0:-622.332,-58.7009,0,-622.332,-58.7009,-622.332	1/1:113:0,113,0:0:0:113,0:4009,0:-361,-34.0164,0,-361,-34.0164,-361	1/2:333:0,173,160:0:0:173,160:6167,5713:-968.818,-466.123,-414.044,-503.052,0,-454.887	1/1:140:0,140,0:0:0:140,0:4988,0:-449.066,-42.1442,0,-449.066,-42.1442,-449.066	1/1:271:0,271,0:0:0:271,0:9611,0:-864.953,-81.5791,0,-864.953,-81.5791,-864.953	1/1:101:0,101,0:0:0:101,0:3566,0:-321.15,-30.404,0,-321.15,-30.404,-321.15	1/1:33:0,33,0:0:0:33,0:1168,0:-105.426,-9.93399,0,-105.426,-9.93399,-105.426	1/2:201:0,86,115:0:0:86,115:3066,4132:-587.047,-337.124,-311.235,-249.96,0,-215.342	1/1:126:0,126,0:0:0:126,0:4484,0:-403.729,-37.9298,0,-403.729,-37.9298,-403.729	1/2:28:0,14,14:0:0:14,14:493,500:-81.2548,-41.1218,-36.9073,-40.4875,0,-36.2731	1/2:253:0,134,119:0:0:134,119:4759,4238:-733.545,-345.77,-305.432,-388.131,0,-352.309	1/1:81:0,81,0:0:0:81,0:2825,0:-254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chr08	20633665	.	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chr08	20710804	.	T	C	15125	PASS	AB=0.453307;ABP=41.9447;AC=23;AF=0.12234;AN=188;AO=964;CIGAR=1X;DP=10715;DPB=10715;DPRA=0.944504;EPP=2096.31;EPPR=21166.2;GTI=1;LEN=1;MEANALT=1;MQM=59.8143;MQMR=59.971;NS=94;NUMALT=1;ODDS=1.8583;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34321;QR=346612;RO=9750;RPL=964;RPP=2096.31;RPPR=21174.9;RPR=0;RUN=1;SAF=0;SAP=2096.31;SAR=964;SRF=1;SRP=21166.2;SRR=9749;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:96:96,0:96:3413:0:0:0,-28.8989,-307.384	0/0:80:80,0:80:2864:0:0:0,-24.0824,-257.997	0/0:294:294,0:294:10475:0:0:0,-88.5028,-942.479	0/0:274:274,0:274:9758:0:0:0,-82.4822,-878.171	0/0:126:126,0:126:4493:0:0:0,-37.9298,-404.532	0/0:45:45,0:45:1608:0:0:0,-13.5463,-145.01	0/0:139:139,0:139:4944:0:0:0,-41.8432,-445.114	0/0:189:189,0:189:6700:0:0:0,-56.8947,-603.077	0/0:130:130,0:130:4544:0:0:0,-39.1339,-409.128	0/0:80:80,0:80:2830:0:0:0,-24.0824,-254.937	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/0:88:88,0:88:3160:0:0:0,-26.4906,-284.618	0/0:66:66,0:66:2338:0:0:0,-19.868,-210.57	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/0:64:63,1:63:2264:1:36:0,-15.6676,-200.424	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.638	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:262:262,0:262:9337:0:0:0,-78.8699,-840.299	0/0:182:182,0:182:6436:0:0:0,-54.7875,-579.325	0/0:274:274,0:274:9714:0:0:0,-82.4822,-874.22	0/0:123:123,0:123:4370:0:0:0,-37.0267,-393.474	0/1:49:37,12:37:1312:12:432:-24.4707,0,-103.631	0/0:185:185,0:185:6531:0:0:0,-55.6905,-587.869	0/1:297:166,131:166:5929:131:4648:-329.07,0,-444.312	0/0:318:317,0:317:11229:0:0:0,-95.4265,-1010.14	0/1:33:14,19:14:504:19:684:-51.9563,0,-35.7641	0/0:357:357,0:357:12673:0:0:0,-107.468,-1140.41	0/0:167:162,5:162:5759:5:180:0,-33.7199,-501.873	0/1:150:97,53:97:3445:53:1885:-124.764,0,-265.109	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	0/0:16:16,0:16:561:0:0:0,-4.81648,-50.8171	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:52:23,29:23:808:29:1044:-78.6212,0,-57.3866	0/0:195:195,0:195:6930:0:0:0,-58.7008,-623.769	0/0:231:231,0:231:8241:0:0:0,-69.5379,-741.691	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:137:95,42:95:3404:42:1489:-93.0568,0,-265.333	0/1:18:8,10:8:288:10:360:-27.3258,0,-20.8241	0/0:240:240,0:240:8541:0:0:0,-72.2472,-768.69	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/0:173:173,0:173:6149:0:0:0,-52.0782,-553.513	0/0:157:157,0:157:5597:0:0:0,-47.2617,-503.85	0/1:217:122,95:122:4340:95:3389:-239.889,0,-325.447	0/0:176:176,0:176:6226:0:0:0,-52.9813,-560.442	0/0:124:124,0:124:4382:0:0:0,-37.3277,-394.555	0/0:238:238,0:238:8434:0:0:0,-71.6451,-759.068	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/1:136:73,63:73:2574:63:2260:-162.723,0,-190.968	0/0:85:85,0:85:2994:0:0:0,-25.5875,-269.678	0/1:23:14,9:14:500:9:309:-21.217,0,-38.4125	0/1:173:97,76:97:3438:76:2704:-191.468,0,-257.554	0/0:106:106,0:106:3796:0:0:0,-31.9092,-341.836	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.017	0/0:93:93,0:93:3332:0:0:0,-27.9958,-300.091	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:182:181,1:181:6436:1:36:0,-51.1892,-575.679	0/0:231:228,3:228:8091:3:108:0,-59.4628,-718.135	0/1:95:44,51:44:1576:51:1821:-135.571,0,-113.534	0/0:127:127,0:127:4490:0:0:0,-38.2308,-404.271	0/0:234:232,2:232:8187:2:57:0,-65.0277,-731.439	0/0:183:183,0:183:6529:0:0:0,-55.0885,-587.694	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:52:52,0:52:1829:0:0:0,-15.6536,-164.889	0/0:28:28,0:28:989:0:0:0,-8.42884,-89.322	0/1:14:9,5:9:320:5:180:-12.3376,0,-24.9279	0/0:297:297,0:297:10586:0:0:0,-89.4059,-952.64	0/1:106:39,67:39:1396:67:2359:-180.631,0,-94.0299	0/0:186:186,0:186:6556:0:0:0,-55.9916,-590.128	0/0:153:153,0:153:5418:0:0:0,-46.0576,-487.753	0/1:177:90,87:90:3197:87:3093:-225.299,0,-234.671	0/0:83:83,0:83:2941:0:0:0,-24.9855,-264.921	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:114:114,0:114:4072:0:0:0,-34.3174,-366.668	0/1:138:87,51:87:3078:51:1836:-123.78,0,-235.701	0/0:392:392,0:392:13954:0:0:0,-118.004,-1255.61	0/0:60:60,0:60:2139:0:0:0,-18.0618,-192.775	0/0:63:63,0:63:2249:0:0:0,-18.9649,-202.671	0/0:36:36,0:36:1280:0:0:0,-10.8371,-115.503	0/0:135:135,0:135:4821:0:0:0,-40.639,-434.044	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:61:33,28:33:1176:28:1004:-72.313,0,-87.7849	0/1:42:24,18:24:860:18:648:-45.9922,0,-65.0786	0/0:13:13,0:13:449:0:0:0,-3.91339,-40.7375	0/1:56:22,34:22:792:34:1209:-92.2565,0,-54.748	0/1:69:23,46:23:828:46:1614:-124.685,0,-54.073	0/0:155:155,0:155:5528:0:0:0,-46.6596,-497.64	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03
chr08	24038406	.	CCTC	GCTT,GCTC	160577	PASS	AB=0.549508,0.447869;ABP=35.477,39.0083;AC=167,21;AF=0.888298,0.111702;AN=188;AO=6635,689;CIGAR=1X2M1X,1X3M;DP=7344;DPB=7344.25;DPRA=0,1.04143;EPP=14402,1499.15;EPPR=0;GTI=1;LEN=4,1;MEANALT=1.43617,2.14815;MQM=57.7967,44.2293;MQMR=0;NS=94;NUMALT=2;ODDS=9.8133;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=233565,24570;QR=0;RO=0;RPL=6635,689;RPP=14410.7,1499.15;RPPR=0;RPR=0,0;RUN=1,1;SAF=1,0;SAP=14402,1499.15;SAR=6634,689;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:71:0,71,0:0:0:71,0:2493,0:-223.628,-21.3731,0,-223.628,-21.3731,-223.628	1/1:49:0,48,0:0:0:48,0:1683,0:-151.199,-14.4494,0,-151.199,-14.4494,-151.199	1/1:122:0,122,0:0:0:122,0:4283,0:-384.613,-36.7257,0,-384.613,-36.7257,-384.613	1/1:82:0,82,0:0:0:82,0:2866,0:-257.978,-24.6845,0,-257.978,-24.6845,-257.978	1/1:18:0,18,0:0:0:18,0:639,0:-57.809,-5.41854,0,-57.809,-5.41854,-57.809	1/1:11:0,11,0:0:0:11,0:388,0:-35.2468,-3.31133,0,-35.2468,-3.31133,-35.2468	1/1:36:0,36,0:0:0:36,0:1245,0:-112.182,-10.8371,0,-112.182,-10.8371,-112.182	1/1:113:0,113,0:0:0:113,0:3981,0:-358.266,-34.0164,0,-358.266,-34.0164,-358.266	1/1:56:0,56,0:0:0:56,0:1957,0:-175.808,-16.8577,0,-175.808,-16.8577,-175.808	1/1:37:0,37,0:0:0:37,0:1309,0:-116.904,-11.1381,0,-116.904,-11.1381,-116.904	1/1:100:0,99,0:0:0:99,0:3482,0:-312.115,-29.802,0,-312.115,-29.802,-312.115	1/1:93:0,92,1:0:0:92,1:3268,36:-293.872,-27.6948,0,-290.979,-24.4473,-290.678	1/1:89:0,89,0:0:0:89,0:3117,0:-280.256,-26.7917,0,-280.256,-26.7917,-280.256	1/1:100:0,100,0:0:0:100,0:3537,0:-318.255,-30.103,0,-318.255,-30.103,-318.255	1/1:77:0,76,0:0:0:76,0:2686,0:-241.039,-22.8783,0,-241.039,-22.8783,-241.039	1/1:83:0,83,0:0:0:83,0:2906,0:-261.573,-24.9855,0,-261.573,-24.9855,-261.573	1/1:46:0,46,0:0:0:46,0:1617,0:-145.802,-13.8474,0,-145.802,-13.8474,-145.802	1/1:35:0,34,0:0:0:34,0:1199,0:-107.914,-10.235,0,-107.914,-10.235,-107.914	1/1:41:0,41,0:0:0:41,0:1427,0:-128.573,-12.3422,0,-128.573,-12.3422,-128.573	1/1:117:0,114,0:0:0:114,0:4012,0:-359.995,-34.3174,0,-359.995,-34.3174,-359.995	1/1:161:0,161,0:0:0:161,0:5657,0:-508.748,-48.4658,0,-508.748,-48.4658,-508.748	1/1:76:0,75,0:0:0:75,0:2642,0:-236.804,-22.5773,0,-236.804,-22.5773,-236.804	1/1:204:0,203,0:0:0:203,0:7065,0:-634.707,-61.1091,0,-634.707,-61.1091,-634.707	1/2:45:0,32,13:0:0:32,13:1139,466:-130.583,-37.7504,-28.1175,-93.1861,0,-89.2727	1/1:56:0,56,0:0:0:56,0:1974,0:-177.797,-16.8577,0,-177.797,-16.8577,-177.797	1/2:142:0,88,54:0:0:88,54:3110,1929:-406.455,-153.464,-126.973,-253.342,0,-237.086	1/1:299:0,299,0:0:0:299,0:10512,0:-945.61,-90.008,0,-945.61,-90.008,-945.61	1/2:40:0,21,19:0:0:21,19:744,680:-115.439,-54.8311,-48.5095,-60.9612,0,-55.2417	1/1:149:0,149,0:0:0:149,0:5259,0:-472.352,-44.8535,0,-472.352,-44.8535,-472.352	1/1:65:0,64,1:0:0:64,1:2252,36:-202.234,-19.2659,0,-199.325,-16.0001,-199.024	1/2:180:0,87,93:0:0:87,93:3044,3316:-510.78,-263.584,-237.394,-247.545,0,-219.549	1/2:15:0,10,5:0:0:10,5:333,180:-41.7827,-14.8854,-11.8751,-27.2457,0,-25.7406	1/1:13:0,13,0:0:0:13,0:467,0:-42.3692,-3.91339,0,-42.3692,-3.91339,-42.3692	1/2:16:0,7,9:0:0:7,9:251,316:-45.6402,-25.2052,-23.098,-20.7852,0,-18.0759	1/1:26:0,26,0:0:0:26,0:919,0:-83.0266,-7.82678,0,-83.0266,-7.82678,-83.0266	1/2:19:0,17,2:0:0:17,2:582,72:-53.2638,-6.14012,-1.02261,-47.4771,0,-46.8751	1/1:233:0,233,0:0:0:233,0:8201,0:-737.492,-70.14,0,-737.492,-70.14,-737.492	1/1:142:0,142,0:0:0:142,0:5023,0:-451.283,-42.7463,0,-451.283,-42.7463,-451.283	1/1:99:0,99,0:0:0:99,0:3511,0:-316.096,-29.802,0,-316.096,-29.802,-316.096	1/1:6:0,6,0:0:0:6,0:210,0:-19.2419,-1.80618,0,-19.2419,-1.80618,-19.2419	1/2:39:0,26,13:0:0:26,13:913,453:-110.531,-36.2554,-28.4286,-74.5655,0,-70.6521	1/2:43:0,20,23:0:0:20,23:710,828:-125.116,-67.266,-61.2454,-58.2056,0,-51.2819	1/1:107:0,106,0:0:0:106,0:3727,0:-335.111,-31.9092,0,-335.111,-31.9092,-335.111	1/1:71:0,70,0:0:0:70,0:2444,0:-219.792,-21.0721,0,-219.792,-21.0721,-219.792	1/1:77:0,77,0:0:0:77,0:2704,0:-243.415,-23.1793,0,-243.415,-23.1793,-243.415	1/1:95:0,95,0:0:0:95,0:3365,0:-302.546,-28.5979,0,-302.546,-28.5979,-302.546	1/1:80:0,80,0:0:0:80,0:2827,0:-254.57,-24.0824,0,-254.57,-24.0824,-254.57	1/2:97:0,59,36:0:0:59,36:2057,1280:-268.372,-101.51,-83.7492,-166.915,0,-156.078	1/1:55:0,55,0:0:0:55,0:1927,0:-173.374,-16.5567,0,-173.374,-16.5567,-173.374	1/1:109:0,109,0:0:0:109,0:3840,0:-344.44,-32.8123,0,-344.44,-32.8123,-344.44	1/1:98:0,98,0:0:0:98,0:3445,0:-309.761,-29.5009,0,-309.761,-29.5009,-309.761	1/1:19:0,19,0:0:0:19,0:667,0:-60.2677,-5.71957,0,-60.2677,-5.71957,-60.2677	1/2:47:0,23,24:0:0:23,24:823,860:-136.407,-69.3824,-62.4587,-67.3801,0,-60.1553	1/1:32:0,32,0:0:0:32,0:1138,0:-102.691,-9.63296,0,-102.691,-9.63296,-102.691	1/1:4:0,4,0:0:0:4,0:143,0:-13.2214,-1.20412,0,-13.2214,-1.20412,-13.2214	1/2:93:0,54,39:0:0:54,39:1902,1386:-266.246,-111.802,-95.5462,-154.795,0,-143.055	1/1:55:0,55,0:0:0:55,0:1940,0:-174.757,-16.5567,0,-174.757,-16.5567,-174.757	1/1:20:0,20,0:0:0:20,0:714,0:-64.4296,-6.0206,0,-64.42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chr08	24344301	.	C	T	243992	PASS	AB=0.582218;ABP=139.054;AC=167;AF=0.888298;AN=188;AO=10946;CIGAR=1X;DP=11943;DPB=11943;DPRA=0;EPP=23711.2;EPPR=2163.63;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.4847;MQMR=59.9729;NS=94;NUMALT=1;ODDS=1.09197;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=389403;QR=35037;RO=995;RPL=10;RPP=23685.2;RPPR=2163.63;RPR=10936;RUN=1;SAF=3;SAP=23745.9;SAR=10943;SRF=0;SRP=2163.63;SRR=995;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:79:0,79:0:0:79:2800:-252.232,-23.7814,0	1/1:92:0,92:0:0:92:3288:-296.132,-27.6948,0	1/1:294:0,294:0:0:294:10444:-939.496,-88.5028,0	1/1:124:0,124:0:0:124:4402:-396.326,-37.3277,0	1/1:70:0,70:0:0:70:2500:-225.24,-21.0721,0	1/1:57:0,57:0:0:57:2040:-183.856,-17.1587,0	1/1:105:1,104:1:36:104:3700:-329.573,-28.0099,0	1/1:158:0,158:0:0:158:5575:-501.462,-47.5627,0	1/1:131:0,131:0:0:131:4661:-419.588,-39.4349,0	1/1:95:1,94:1:36:94:3338:-296.715,-24.9996,0	1/1:122:0,122:0:0:122:4340:-390.717,-36.7257,0	1/1:135:0,135:0:0:135:4819:-433.621,-40.6391,0	1/1:87:0,87:0:0:87:3096:-278.839,-26.1896,0	1/1:95:0,95:0:0:95:3354:-301.906,-28.5979,0	1/1:67:0,67:0:0:67:2382:-214.619,-20.169,0	1/1:105:0,105:0:0:105:3746:-337.271,-31.6082,0	1/1:73:0,73:0:0:73:2612:-235.122,-21.9752,0	1/1:37:0,37:0:0:37:1316:-118.722,-11.1381,0	1/1:74:0,74:0:0:74:2655:-238.232,-22.2762,0	1/1:156:2,154:2:72:154:5462:-484.731,-40.124,0	1/1:178:0,178:0:0:178:6331:-569.717,-53.5833,0	1/1:138:0,138:0:0:138:4909:-441.924,-41.5421,0	1/1:142:0,142:0:0:142:5021:-451.411,-42.7463,0	0/1:55:25,30:25:860:30:1067:-79.5355,0,-61.155	1/1:175:0,175:0:0:175:6216:-559.288,-52.6803,0	0/1:259:88,171:88:3113:171:6086:-469.842,0,-202.431	1/1:417:1,416:1:36:416:14817:-1329.18,-121.931,0	0/1:41:21,20:21:744:20:703:-51.247,0,-54.9421	1/1:315:0,314:0:0:314:11189:-1005.83,-94.5234,0	1/1:155:1,154:1:36:154:5454:-487.15,-43.0614,0	0/1:139:67,72:67:2375:72:2572:-189.832,0,-172.165	0/1:26:17,9:17:585:9:324:-21.6683,0,-45.1451	1/1:167:3,164:3:104:164:5851:-516.918,-40.5692,0	1/1:154:7,147:7:243:147:5232:-448.778,-24.1511,0	1/1:14:0,14:0:0:14:486:-44.0518,-4.21442,0	0/1:51:10,41:10:352:41:1445:-114.981,0,-16.6657	1/1:256:1,255:1:36:255:9068:-812.359,-73.4654,0	1/1:168:0,168:0:0:168:6020:-540.579,-50.573,0	1/1:107:0,107:0:0:107:3831:-344.772,-32.2102,0	1/1:22:0,22:0:0:22:780:-70.523,-6.62266,0	0/1:145:56,89:56:2003:89:3165:-240.972,0,-136.894	0/1:49:22,27:22:767:27:972:-73.0368,0,-54.599	1/1:259:0,259:0:0:259:9216:-829.296,-77.9668,0	1/1:88:0,88:0:0:88:3156:-284.236,-26.4906,0	1/1:80:0,80:0:0:80:2850:-256.71,-24.0824,0	1/1:158:0,158:0:0:158:5611:-504.906,-47.5627,0	1/1:113:0,113:0:0:113:4034:-363.222,-34.0164,0	0/1:190:77,113:77:2683:113:4022:-304.843,0,-184.518	1/1:48:0,48:0:0:48:1715:-154.304,-14.4494,0	1/1:154:1,153:1:36:153:5452:-487.116,-42.7603,0	1/1:203:0,203:0:0:203:7242:-651.429,-61.1091,0	1/1:20:0,20:0:0:20:712:-64.3929,-6.0206,0	0/1:193:92,101:92:3270:101:3586:-264.822,0,-236.194	1/1:100:0,100:0:0:100:3570:-320.678,-30.103,0	0/1:25:6,19:6:216:19:676:-53.6341,0,-12.2648	0/1:163:72,91:72:2528:91:3222:-241.115,0,-178.703	1/1:85:0,85:0:0:85:3035:-272.021,-25.5876,0	1/1:256:0,256:0:0:256:9096:-818.211,-77.0637,0	1/1:24:0,24:0:0:24:856:-77.341,-7.22472,0	1/1:152:0,152:0:0:152:5423:-487.906,-45.7566,0	1/1:130:0,130:0:0:130:4651:-418.67,-39.1339,0	1/1:211:1,210:1:32:210:7483:-669.914,-60.318,0	1/1:265:0,265:0:0:265:9446:-849.966,-79.773,0	1/1:168:3,165:3:108:165:5883:-519.098,-40.4979,0	0/1:105:29,76:29:1013:76:2715:-212.491,0,-59.8712	1/1:97:0,97:0:0:97:3448:-310.51,-29.1999,0	1/1:194:3,191:3:104:191:6805:-602.564,-48.697,0	1/1:210:1,209:1:36:209:7428:-664.507,-59.618,0	1/1:120:0,120:0:0:120:4280:-385.287,-36.1236,0	1/1:43:0,43:0:0:43:1531:-138.082,-12.9443,0	1/1:53:0,53:0:0:53:1887:-169.79,-15.9546,0	0/1:44:15,29:15:531:29:1024:-79.2273,0,-34.8766	1/1:211:0,211:0:0:211:7457:-670.785,-63.5173,0	0/1:94:38,55:38:1356:55:1964:-148.641,0,-94.0238	1/1:193:1,192:1:32:192:6806:-609.146,-54.8995,0	1/1:185:0,185:0:0:185:6610:-594.652,-55.6906,0	0/1:175:54,121:54:1896:121:4254:-330.335,0,-118.235	1/1:130:0,130:0:0:130:4576:-411.976,-39.1339,0	1/1:43:0,43:0:0:43:1527:-137.714,-12.9443,0	1/1:105:0,105:0:0:105:3747:-337.393,-31.6082,0	0/1:88:62,26:62:2189:26:936:-57.9028,0,-170.781	1/1:200:1,199:1:36:199:7058:-631.584,-56.6077,0	1/1:65:0,65:0:0:65:2312:-208.327,-19.567,0	1/1:92:0,92:0:0:92:3287:-295.75,-27.6948,0	1/1:48:0,48:0:0:48:1663:-149.947,-14.4494,0	1/1:133:0,133:0:0:133:4704:-423.182,-40.037,0	1/1:19:0,19:0:0:19:676:-61.1646,-5.71957,0	0/1:91:36,55:36:1264:55:1956:-148.913,0,-86.6661	0/1:90:40,50:40:1392:50:1766:-131.877,0,-98.4813	1/1:89:0,89:0:0:89:3141:-282.893,-26.7917,0	0/1:205:80,125:80:2808:125:4444:-338.351,0,-191.25	0/1:89:60,29:60:2109:29:1036:-66.7485,0,-163.286	1/1:220:0,220:0:0:220:7847:-706.219,-66.2266,0	1/1:98:0,98:0:0:98:3512:-316.18,-29.5009,0
chr08	24344316	.	G	A	245320	PASS	AB=0.585702;ABP=151.145;AC=167;AF=0.888298;AN=188;AO=10965;CIGAR=1X;DP=11958;DPB=11958;DPRA=0;EPP=23735.1;EPPR=2157.11;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.486;MQMR=60;NS=94;NUMALT=1;ODDS=1.06163;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=391212;QR=34786;RO=992;RPL=9;RPP=23735.1;RPPR=2157.11;RPR=10956;RUN=1;SAF=0;SAP=23813.2;SAR=10965;SRF=0;SRP=2157.11;SRR=992;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:82:0,82:0:0:82:2939:-264.732,-24.6845,0	1/1:91:0,91:0:0:91:3253:-292.981,-27.3937,0	1/1:294:1,293:1:36:293:10475:-938.592,-84.9045,0	1/1:130:0,130:0:0:130:4630:-416.797,-39.1339,0	1/1:71:0,71:0:0:71:2545:-229.294,-21.3731,0	1/1:58:0,58:0:0:58:2065:-186.105,-17.4597,0	1/1:103:1,102:1:36:102:3656:-325.604,-27.4078,0	1/1:157:0,157:0:0:157:5608:-504.553,-47.2617,0	1/1:131:0,131:0:0:131:4670:-420.398,-39.4349,0	1/1:94:0,94:0:0:94:3351:-301.741,-28.2968,0	1/1:119:0,119:0:0:119:4266:-384.059,-35.8226,0	1/1:132:0,132:0:0:132:4653:-418.874,-39.736,0	1/1:82:0,82:0:0:82:2940:-264.809,-24.6845,0	1/1:92:1,91:1:36:91:3187:-283.392,-24.0965,0	1/1:66:0,66:0:0:66:2368:-213.361,-19.868,0	1/1:105:0,105:0:0:105:3760:-338.516,-31.6082,0	1/1:74:0,74:0:0:74:2637:-237.182,-22.2762,0	1/1:36:0,36:0:0:36:1277:-115.219,-10.8371,0	1/1:73:0,73:0:0:73:2596:-233.861,-21.9752,0	1/1:162:2,160:2:72:160:5672:-503.482,-41.9301,0	1/1:179:0,179:0:0:179:6362:-572.509,-53.8844,0	1/1:139:0,139:0:0:139:4970:-447.395,-41.8432,0	1/1:140:1,139:1:36:139:4988:-445.124,-38.5459,0	0/1:57:25,32:25:832:32:1118:-83.7205,0,-58.023	1/1:172:0,172:0:0:172:6152:-553.634,-51.7772,0	0/1:255:84,171:84:2921:171:6102:-472.467,0,-186.361	1/1:425:2,423:2:68:423:15091:-1350.96,-121.48,0	0/1:41:21,20:21:743:20:720:-52.7759,0,-54.8511	1/1:312:0,312:0:0:312:11109:-999.108,-93.9214,0	1/1:154:1,153:1:36:153:5487:-490.103,-42.7603,0	0/1:139:66,73:66:2305:73:2620:-194.163,0,-165.865	0/1:28:17,11:17:604:11:396:-27.5432,0,-46.2618	1/1:167:3,164:3:108:164:5879:-519.067,-40.1968,0	1/1:148:7,141:7:248:141:5025:-429.7,-21.8882,0	1/1:14:0,14:0:0:14:491:-44.5139,-4.21442,0	0/1:52:10,42:10:356:42:1486:-118.357,0,-16.7277	1/1:254:0,254:0:0:254:9083:-817.311,-76.4616,0	1/1:174:0,174:0:0:174:6199:-557.544,-52.3792,0	1/1:109:0,109:0:0:109:3900:-350.977,-32.8123,0	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	0/1:147:57,90:57:2036:90:3208:-244.583,0,-139.261	0/1:48:21,27:21:728:27:959:-72.1653,0,-51.3883	1/1:261:0,260:0:0:260:9275:-834.162,-78.2678,0	1/1:92:0,92:0:0:92:3308:-297.909,-27.6948,0	1/1:85:0,85:0:0:85:3052:-274.881,-25.5876,0	1/1:155:0,155:0:0:155:5520:-496.791,-46.6597,0	1/1:111:0,111:0:0:111:3987:-358.998,-33.4143,0	0/1:195:81,114:81:2842:114:4070:-307.655,0,-197.317	1/1:50:0,50:0:0:50:1762:-158.687,-15.0515,0	1/1:155:1,154:1:36:154:5536:-494.664,-43.0614,0	1/1:204:0,204:0:0:204:7249:-652.202,-61.4101,0	1/1:20:0,20:0:0:20:714:-64.5834,-6.0206,0	0/1:191:91,100:91:3233:100:3592:-265.963,0,-233.695	1/1:103:0,103:0:0:103:3676:-329.936,-31.0061,0	0/1:25:7,18:7:248:18:633:-49.7611,0,-15.1384	0/1:161:71,90:71:2487:90:3223:-241.8,0,-175.614	1/1:83:0,83:0:0:83:2946:-265.319,-24.9855,0	1/1:257:0,257:0:0:257:9187:-826.369,-77.3647,0	1/1:23:0,23:0:0:23:828:-74.8203,-6.92369,0	1/1:151:0,151:0:0:151:5410:-486.905,-45.4555,0	1/1:130:0,130:0:0:130:4640:-417.682,-39.1339,0	1/1:215:1,214:1:36:214:7627:-682.453,-61.1232,0	1/1:271:0,271:0:0:271:9682:-871.151,-81.5791,0	1/1:171:3,168:3:108:168:5960:-526.024,-41.401,0	0/1:111:31,80:31:1048:80:2855:-223.475,0,-61.2033	1/1:98:0,98:0:0:98:3506:-315.727,-29.5009,0	1/1:189:2,187:2:72:187:6664:-592.874,-50.0579,0	1/1:206:1,205:1:36:205:7309:-654.18,-58.4139,0	1/1:119:0,119:0:0:119:4251:-382.691,-35.8226,0	1/1:43:0,43:0:0:43:1535:-138.442,-12.9443,0	1/1:55:0,55:0:0:55:1967:-176.978,-16.5567,0	0/1:44:15,29:15:519:29:1044:-81.0295,0,-33.7914	1/1:209:0,209:0:0:209:7469:-672.136,-62.9153,0	0/1:94:37,57:37:1324:57:2036:-155.136,0,-91.1653	1/1:192:2,190:2:72:190:6735:-599.106,-50.961,0	1/1:185:0,185:0:0:185:6598:-593.594,-55.6906,0	0/1:175:54,121:54:1904:121:4290:-333.57,0,-118.955	1/1:131:0,131:0:0:131:4688:-422.009,-39.4349,0	1/1:42:0,42:0:0:42:1499:-135.196,-12.6433,0	1/1:106:0,106:0:0:106:3792:-341.432,-31.9092,0	0/1:90:64,26:64:2232:26:928:-56.5795,0,-174.048	1/1:198:1,197:1:36:197:6997:-626.017,-56.0057,0	1/1:64:0,64:0:0:64:2300:-207.247,-19.2659,0	1/1:96:0,96:0:0:96:3423:-307.994,-28.8989,0	1/1:45:0,45:0:0:45:1596:-143.927,-13.5464,0	1/1:132:0,132:0:0:132:4687:-421.907,-39.736,0	1/1:17:0,17:0:0:17:608:-55.0507,-5.11751,0	0/1:91:36,55:36:1260:55:1968:-149.993,0,-86.3059	0/1:89:39,50:39:1349:50:1769:-132.619,0,-94.9141	1/1:91:0,91:0:0:91:3222:-290.174,-27.3937,0	0/1:203:78,125:78:2759:125:4435:-338.138,0,-187.444	0/1:86:57,29:57:1984:29:1044:-68.3725,0,-152.941	1/1:219:0,219:0:0:219:7828:-704.49,-65.9256,0	1/1:101:0,101:0:0:101:3615:-325.442,-30.404,0
chr08	24344358	.	G	C	246088	PASS	AB=0.576476;ABP=120.916;AC=167;AF=0.888298;AN=188;AO=10923;CIGAR=1X;DP=11933;DPB=11933;DPRA=0;EPP=23419;EPPR=2155.02;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.4901;MQMR=59.9472;NS=94;NUMALT=1;ODDS=1.71935;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=389923;QR=35885;RO=1003;RPL=10888;RPP=23419;RPPR=2163.66;RPR=35;RUN=1;SAF=0;SAP=23722;SAR=10923;SRF=1;SRP=2172.32;SRR=1002;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:82:0,82:0:0:82:2932:-264.103,-24.6845,0	1/1:91:0,91:0:0:91:3253:-292.981,-27.3937,0	1/1:288:0,288:0:0:288:10281:-924.849,-86.6966,0	1/1:129:1,128:1:36:128:4577:-408.185,-35.2346,0	1/1:72:0,72:0:0:72:2580:-232.434,-21.6742,0	1/1:56:0,56:0:0:56:2004:-180.613,-16.8577,0	1/1:107:0,107:0:0:107:3802:-342.31,-32.2102,0	1/1:156:0,156:0:0:156:5565:-500.738,-46.9607,0	1/1:130:0,129:0:0:129:4617:-415.407,-38.8329,0	1/1:94:0,94:0:0:94:3376:-303.73,-28.2968,0	1/1:120:0,120:0:0:120:4285:-385.758,-36.1236,0	1/1:129:0,129:0:0:129:4605:-414.381,-38.8329,0	1/1:84:0,84:0:0:84:3012:-271.278,-25.2865,0	1/1:94:0,93:0:0:93:3317:-298.463,-27.9958,0	1/1:66:0,66:0:0:66:2356:-212.282,-19.868,0	1/1:99:0,99:0:0:99:3556:-320.171,-29.802,0	1/1:72:0,72:0:0:72:2567:-231.074,-21.6742,0	1/1:36:0,36:0:0:36:1288:-116.204,-10.8371,0	1/1:71:0,71:0:0:71:2533:-228.194,-21.3731,0	1/1:156:2,154:2:72:154:5490:-486.883,-40.124,0	1/1:177:0,177:0:0:177:6303:-567.195,-53.2823,0	1/1:136:0,136:0:0:136:4873:-438.668,-40.9401,0	1/1:144:0,144:0:0:144:5132:-461.628,-43.3483,0	0/1:55:24,31:24:856:31:1070:-79.9186,0,-60.8045	1/1:174:0,174:0:0:174:6203:-558.112,-52.3792,0	0/1:259:88,170:88:3160:170:6063:-467.703,0,-206.599	1/1:415:0,415:0:0:415:14865:-1337.08,-124.927,0	0/1:39:19,20:19:676:20:716:-53.0169,0,-49.4278	1/1:311:0,310:0:0:310:11072:-995.317,-93.3193,0	1/1:160:0,160:0:0:160:5714:-514.112,-48.1648,0	0/1:132:69,63:69:2472:63:2264:-164.231,0,-182.998	0/1:28:16,12:16:576:12:428:-30.4193,0,-43.7461	1/1:166:3,163:3:108:163:5841:-515.642,-39.8958,0	1/1:150:7,143:7:252:143:5114:-437.332,-22.1255,0	1/1:14:0,14:0:0:14:500:-45.3184,-4.21442,0	0/1:46:10,36:10:360:36:1269:-100.652,0,-18.8969	1/1:251:0,251:0:0:251:8940:-803.751,-75.5585,0	1/1:172:0,172:0:0:172:6153:-553.73,-51.7772,0	1/1:109:0,109:0:0:109:3905:-351.413,-32.8123,0	1/1:22:0,22:0:0:22:788:-71.2223,-6.62266,0	0/1:147:59,88:59:2104:88:3164:-240.273,0,-145.378	0/1:48:22,26:22:784:26:932:-69.7388,0,-56.4345	1/1:261:0,261:0:0:261:9296:-836.43,-78.5688,0	1/1:91:0,91:0:0:91:3268:-294.312,-27.3937,0	1/1:82:0,82:0:0:82:2895:-260.755,-24.6845,0	1/1:155:0,155:0:0:155:5530:-497.246,-46.6597,0	1/1:112:0,112:0:0:112:3996:-359.799,-33.7154,0	0/1:198:83,115:83:2972:115:4113:-310.466,0,-208.109	1/1:50:0,50:0:0:50:1769:-159.16,-15.0515,0	1/1:157:0,157:0:0:157:5617:-505.564,-47.2617,0	1/1:205:0,205:0:0:205:7333:-659.611,-61.7112,0	1/1:20:0,20:0:0:20:712:-64.3929,-6.0206,0	0/1:195:94,101:94:3372:101:3624:-267.631,0,-244.567	1/1:103:0,103:0:0:103:3681:-330.626,-31.0061,0	0/1:25:7,18:7:248:18:633:-49.7611,0,-15.1384	0/1:169:74,95:74:2652:95:3412:-256.392,0,-188.052	1/1:81:0,81:0:0:81:2889:-260.217,-24.3834,0	1/1:255:0,255:0:0:255:9094:-817.837,-76.7627,0	1/1:23:0,23:0:0:23:824:-74.4657,-6.92369,0	1/1:149:0,149:0:0:149:5319:-478.516,-44.8535,0	1/1:130:0,130:0:0:130:4630:-416.78,-39.1339,0	1/1:216:0,216:0:0:216:7683:-691.119,-65.0225,0	1/1:265:0,265:0:0:265:9451:-850.415,-79.773,0	1/1:171:3,168:3:108:168:6012:-530.676,-41.401,0	0/1:111:31,80:31:1108:80:2849:-222.738,0,-66.6167	1/1:99:0,99:0:0:99:3541:-318.875,-29.802,0	1/1:185:3,182:3:93:182:6528:-578.873,-47.0334,0	1/1:208:1,207:1:36:207:7390:-660.447,-59.016,0	1/1:116:0,116:0:0:116:4138:-372.519,-34.9195,0	1/1:43:0,42:0:0:42:1500:-134.932,-12.6433,0	1/1:56:0,56:0:0:56:2012:-181.027,-16.8577,0	0/1:46:16,30:16:568:30:1049:-80.8708,0,-37.6045	1/1:209:0,208:0:0:208:7342:-660.271,-62.6142,0	0/1:94:38,56:38:1356:56:1993:-151.266,0,-94.0437	1/1:194:1,193:1:36:193:6856:-613.456,-54.8015,0	1/1:182:0,182:0:0:182:6515:-586.012,-54.7875,0	0/1:172:54,118:54:1936:118:4217:-327.891,0,-122.739	1/1:126:0,126:0:0:126:4471:-402.527,-37.9298,0	1/1:42:0,42:0:0:42:1508:-136.006,-12.6433,0	1/1:105:0,105:0:0:105:3737:-336.497,-31.6082,0	0/1:88:64,24:64:2292:24:852:-50.5016,0,-180.051	1/1:202:0,202:0:0:202:7225:-650.103,-60.8081,0	1/1:65:0,65:0:0:65:2320:-209.046,-19.567,0	1/1:92:0,92:0:0:92:3262:-293.51,-27.6948,0	1/1:46:0,46:0:0:46:1620:-146.086,-13.8474,0	1/1:130:1,129:1:36:129:4590:-409.349,-35.5356,0	1/1:19:0,19:0:0:19:684:-61.887,-5.71957,0	0/1:88:35,53:35:1244:53:1904:-145.139,0,-85.774	0/1:90:40,50:40:1423:50:1773:-132.462,0,-101.274	1/1:90:0,90:0:0:90:3224:-290.352,-27.0927,0	0/1:207:81,125:81:2897:125:4465:-339.552,0,-198.592	0/1:84:57,27:57:2052:27:968:-62.1371,0,-159.665	1/1:242:0,242:0:0:242:8669:-780.143,-72.8493,0	1/1:102:0,102:0:0:102:3635:-327.236,-30.7051,0
chr08	26546727	.	A	G	156119	PASS	AB=0.509704;ABP=3.81102;AC=171;AF=0.909574;AN=188;AO=6717;CIGAR=1X;DP=7226;DPB=7226;DPRA=0;EPP=13665.8;EPPR=1080.13;GTI=2;LEN=1;MEANALT=1.04255;MQM=53.7249;MQMR=59.6845;NS=94;NUMALT=1;ODDS=6.69889;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240433;QR=17953;RO=504;RPL=108;RPP=13665.8;RPPR=1080.13;RPR=6609;RUN=1;SAF=6717;SAP=14588.8;SAR=0;SRF=504;SRP=1097.43;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:10:1,9:1:36:9:305:-24.7056,0,-0.587975	1/1:47:0,47:0:0:47:1684:-151.109,-14.1484,0	1/1:91:0,91:0:0:91:3256:-291.817,-27.3937,0	1/1:94:0,94:0:0:94:3384:-304.299,-28.2968,0	1/1:13:0,13:0:0:13:468:-42.3923,-3.91339,0	1/1:14:0,14:0:0:14:500:-45.2262,-4.21442,0	1/1:91:0,91:0:0:91:3268:-293.807,-27.3937,0	1/1:43:0,43:0:0:43:1544:-138.907,-12.9443,0	1/1:35:0,35:0:0:35:1252:-112.529,-10.5361,0	1/1:35:0,35:0:0:35:1241:-111.655,-10.5361,0	1/1:123:0,123:0:0:123:4416:-396.895,-37.0267,0	1/1:32:0,32:0:0:32:1148:-103.219,-9.63296,0	1/1:28:1,27:1:36:27:964:-83.3232,-4.83057,0	1/1:26:0,26:0:0:26:932:-84.0831,-7.82678,0	1/1:14:0,14:0:0:14:504:-45.6675,-4.21442,0	1/1:22:0,22:0:0:22:784:-70.7787,-6.62266,0	1/1:21:0,21:0:0:21:743:-67.0378,-6.32163,0	1/1:17:0,17:0:0:17:612:-55.2823,-5.11751,0	1/1:77:0,77:0:0:77:2770:-248.495,-23.1793,0	1/1:64:0,64:0:0:64:2296:-206.492,-19.2659,0	1/1:49:0,49:0:0:49:1756:-157.961,-14.7505,0	1/1:39:0,39:0:0:39:1399:-126.122,-11.7402,0	1/1:30:0,30:0:0:30:1080:-97.4429,-9.0309,0	0/1:41:20,21:20:693:21:756:-55.9173,0,-50.3474	1/1:25:0,25:0:0:25:896:-80.5849,-7.52575,0	0/1:145:96,49:96:3433:49:1752:-114.148,0,-265.525	1/1:106:0,106:0:0:106:3808:-342.054,-31.9092,0	0/1:12:8,4:8:273:4:144:-9.68345,0,-21.2878	1/1:77:0,77:0:0:77:2764:-248.903,-23.1793,0	1/1:45:2,43:2:72:43:1540:-131.582,-6.70963,0	0/1:64:48,16:48:1728:16:576:-32.8676,0,-136.447	1/1:224:4,220:4:144:220:7888:-694.765,-54.118,0	1/1:322:0,322:0:0:322:11522:-1033.43,-96.9317,0	1/1:177:0,177:0:0:177:6307:-565.772,-53.2823,0	1/1:638:0,637:0:0:637:22747:-2033.41,-191.756,0	1/1:190:8,182:8:284:182:6507:-557.197,-31.2923,0	1/1:63:0,63:0:0:63:2227:-200.534,-18.9649,0	1/1:59:0,59:0:0:59:2112:-189.165,-17.7608,0	1/1:144:0,144:0:0:144:5153:-461.25,-43.3483,0	1/1:212:0,211:0:0:211:7577:-679.172,-63.5173,0	0/1:52:38,14:38:1338:14:496:-29.2478,0,-105.054	0/1:43:12,31:12:428:31:1116:-87.4692,0,-25.9145	1/1:61:0,61:0:0:61:2196:-197.28,-18.3628,0	1/1:12:0,12:0:0:12:432:-39.1953,-3.61236,0	1/1:15:0,15:0:0:15:540:-48.8078,-4.51545,0	1/1:53:0,53:0:0:53:1884:-169.663,-15.9546,0	1/1:33:0,33:0:0:33:1188:-106.413,-9.93399,0	0/1:80:43,37:43:1529:37:1317:-94.5449,0,-113.812	1/1:61:0,61:0:0:61:2192:-196.617,-18.3628,0	1/1:28:0,28:0:0:28:996:-89.8934,-8.42884,0	1/1:73:0,73:0:0:73:2608:-234.756,-21.9752,0	1/1:124:2,122:2:72:122:4365:-384.587,-30.491,0	0/1:64:41,23:41:1472:23:828:-55.2077,0,-113.51	1/1:21:0,20:0:0:20:716:-64.3884,-6.0206,0	1/1:207:4,203:4:140:203:7254:-636.69,-49.3889,0	0/1:53:38,15:38:1334:15:540:-32.6432,0,-104.078	1/1:26:0,26:0:0:26:936:-83.7843,-7.82678,0	1/1:219:0,219:0:0:219:7838:-704.373,-65.9256,0	1/1:351:0,349:0:0:349:12512:-1124,-105.059,0	1/1:48:0,48:0:0:48:1716:-154.237,-14.4494,0	1/1:46:1,45:1:36:45:1616:-141.713,-10.2491,0	1/1:200:0,200:0:0:200:7152:-642.814,-60.206,0	1/1:21:0,21:0:0:21:748:-67.5827,-6.32163,0	1/1:84:1,83:1:36:83:2980:-264.303,-21.6882,0	0/1:13:7,6:7:252:6:216:-15.8491,0,-19.1156	1/1:38:0,38:0:0:38:1356:-122.227,-11.4391,0	1/1:56:0,56:0:0:56:2001:-180.217,-16.8577,0	1/1:35:0,35:0:0:35:1248:-112.244,-10.5361,0	1/1:87:0,87:0:0:87:3124:-279.595,-26.1896,0	1/1:32:0,32:0:0:32:1129:-101.384,-9.63296,0	1/1:29:0,29:0:0:29:1029:-92.8877,-8.72987,0	0/1:90:10,80:10:356:80:2880:-231.641,0,-5.28231	1/1:40:0,40:0:0:40:1440:-129.397,-12.0412,0	0/1:17:11,6:11:396:6:216:-14.6315,0,-30.8652	1/1:50:0,50:0:0:50:1788:-160.77,-15.0515,0	1/1:38:0,38:0:0:38:1368:-123.301,-11.4391,0	1/1:37:0,37:0:0:37:1320:-118.632,-11.1381,0	1/1:24:0,24:0:0:24:864:-77.704,-7.22472,0	1/1:333:0,333:0:0:333:11968:-1071.48,-100.243,0	1/1:23:0,23:0:0:23:809:-72.8981,-6.92369,0	0/1:59:35,24:35:1241:24:864:-60.1255,0,-94.2317	1/1:100:1,99:1:36:99:3560:-316.294,-26.5047,0	1/1:30:0,30:0:0:30:1076:-96.8437,-9.0309,0	1/1:21:0,21:0:0:21:718:-64.8929,-6.32163,0	1/1:15:0,15:0:0:15:540:-48.9036,-4.51545,0	1/1:28:0,28:0:0:28:995:-89.775,-8.42884,0	1/1:20:0,20:0:0:20:716:-64.4264,-6.0206,0	0/1:38:29,9:29:1044:9:320:-17.6505,0,-82.8275	1/1:26:0,26:0:0:26:932:-83.8171,-7.82678,0	1/1:180:0,180:0:0:180:6418:-575.988,-54.1854,0	0/1:176:25,151:25:896:151:5403:-432.261,0,-27.9689	0/1:22:18,4:18:648:4:144:-6.68136,0,-52.0259	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:25:0,25:0:0:25:887:-80.0195,-7.52575,0
chr08	26546744	.	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chr08	27164478	.	C	T	220938	PASS	AB=0.473005;ABP=13.7963;AC=165;AF=0.87766;AN=188;AO=7853;CIGAR=1X;DP=8782;DPB=8782;DPRA=13.4793;EPP=17029.5;EPPR=2015.97;GTI=1;LEN=1;MEANALT=1.02151;MQM=54.0833;MQMR=59.9978;NS=94;NUMALT=1;ODDS=10.2828;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=279772;QR=33041;RO=927;RPL=3977;RPP=5.83103;RPPR=31.8719;RPR=3876;RUN=1;SAF=3976;SAP=5.72042;SAR=3877;SRF=519;SRP=31.8719;SRR=408;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:40:0,40:0:0:40:1404:-126.332,-12.0412,0	1/1:102:0,102:0:0:102:3644:-325.942,-30.7051,0	1/1:167:1,166:1:36:166:5897:-525.292,-46.6737,0	1/1:152:0,152:0:0:152:5394:-484.003,-45.7566,0	1/1:55:1,54:1:36:54:1927:-169.454,-12.9584,0	1/1:42:0,42:0:0:42:1481:-132.522,-12.6433,0	1/1:51:0,51:0:0:51:1816:-163.249,-15.3525,0	1/1:127:0,127:0:0:127:4554:-406.381,-38.2308,0	1/1:146:2,144:2:72:144:5136:-453.44,-37.1137,0	1/1:111:0,111:0:0:111:3951:-354.985,-33.4143,0	1/1:90:0,90:0:0:90:3224:-289.054,-27.0927,0	1/1:152:0,152:0:0:152:5419:-484.287,-45.7566,0	1/1:136:2,134:2:63:134:4794:-420.768,-34.9569,0	1/1:131:0,131:0:0:131:4659:-415.217,-39.4349,0	1/1:137:1,136:1:36:136:4831:-429.346,-37.6428,0	1/1:82:0,82:0:0:82:2946:-263.516,-24.6845,0	1/1:114:0,114:0:0:114:4061:-362.406,-34.3174,0	1/1:102:0,102:0:0:102:3618:-322.718,-30.7051,0	1/1:55:2,53:2:72:53:1892:-162.317,-9.71993,0	1/1:149:1,148:1:36:148:5261:-468.927,-41.2552,0	1/1:140:2,138:2:72:138:4898:-431.61,-35.3075,0	1/1:36:0,36:0:0:36:1280:-115.285,-10.8371,0	1/1:77:0,77:0:0:77:2737:-245.625,-23.1793,0	0/1:49:18,31:18:648:31:1094:-83.5121,0,-43.9014	1/1:78:0,78:0:0:78:2755:-247.758,-23.4803,0	0/1:206:104,102:104:3715:102:3642:-265.466,0,-272.539	1/1:219:0,219:0:0:219:7782:-698.059,-65.9256,0	0/1:72:42,30:42:1508:30:1063:-73.5889,0,-114.34	1/1:197:0,197:0:0:197:7023:-631.412,-59.3029,0	1/1:57:3,54:3:108:54:1909:-161.315,-7.08354,0	0/1:77:40,37:40:1417:37:1328:-96.3754,0,-104.646	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	1/1:10:0,10:0:0:10:344:-31.2707,-3.0103,0	0/1:4:3,1:3:108:1:36:-2.3545,0,-8.87105	1/1:6:0,6:0:0:6:207:-18.9305,-1.80618,0	0/1:11:5,6:5:180:6:216:-16.4428,0,-13.2407	1/1:287:0,287:0:0:287:10248:-919.067,-86.3956,0	1/1:44:1,43:1:36:43:1539:-132.926,-9.64705,0	1/1:96:0,96:0:0:96:3423:-305.584,-28.8989,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:114:67,47:67:2395:47:1688:-117.343,0,-181.489	0/1:67:31,36:31:1084:36:1277:-94.631,0,-77.6971	1/1:53:0,53:0:0:53:1900:-170.803,-15.9546,0	1/1:129:0,129:0:0:129:4608:-413.311,-38.8329,0	1/1:127:0,127:0:0:127:4537:-407.208,-38.2308,0	1/1:55:0,55:0:0:55:1957:-176.355,-16.5567,0	1/1:109:0,109:0:0:109:3839:-343.56,-32.8123,0	0/1:125:65,60:65:2321:60:2113:-152.305,0,-171.52	1/1:80:0,80:0:0:80:2851:-255.552,-24.0824,0	1/1:93:0,93:0:0:93:3336:-299.564,-27.9958,0	1/1:69:0,69:0:0:69:2437:-219.248,-20.7711,0	0/1:4:3,1:3:108:1:36:-2.37893,0,-8.87105	0/1:120:60,60:60:2134:60:2103:-152.64,0,-156.203	0/1:65:35,30:35:1260:30:1065:-76.5274,0,-94.1385	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:124:72,52:72:2565:52:1860:-129.676,0,-193.771	1/1:37:0,37:0:0:37:1328:-119.589,-11.1381,0	1/1:4:0,4:0:0:4:136:-12.573,-1.20412,0	1/1:8:0,8:0:0:8:288:-25.8831,-2.40824,0	1/1:74:0,74:0:0:74:2645:-237.353,-22.2762,0	1/1:147:0,147:0:0:147:5255:-470.925,-44.2514,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:82:0,82:0:0:82:2888:-259.916,-24.6845,0	1/1:102:2,100:2:72:100:3584:-315.041,-23.8683,0	0/1:59:35,24:35:1248:24:830:-56.9806,0,-94.8641	1/1:81:0,81:0:0:81:2894:-259.996,-24.3834,0	1/1:142:2,140:2:72:140:4955:-437.774,-35.9095,0	1/1:87:1,86:1:36:86:3055:-270.623,-22.5913,0	1/1:43:0,43:0:0:43:1548:-138.284,-12.9443,0	1/1:58:0,58:0:0:58:2080:-185.145,-17.4597,0	1/1:124:0,124:0:0:124:4428:-397.078,-37.3277,0	0/1:23:14,9:14:500:9:320:-22.1909,0,-38.4125	1/1:73:0,73:0:0:73:2615:-235.128,-21.9752,0	0/1:105:44,61:44:1572:61:2177:-162.44,0,-110.163	1/1:151:0,151:0:0:151:5378:-481.918,-45.4555,0	1/1:110:0,110:0:0:110:3910:-351.486,-33.1133,0	1/1:91:0,91:0:0:91:3241:-290.721,-27.3937,0	1/1:111:0,111:0:0:111:3944:-352.438,-33.4143,0	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:114:0,114:0:0:114:4037:-362.04,-34.3174,0	0/1:143:70,73:70:2490:73:2620:-192.249,0,-181.305	1/1:198:0,198:0:0:198:7066:-634.259,-59.6039,0	1/1:121:0,121:0:0:121:4343:-388.892,-36.4246,0	1/1:120:0,120:0:0:120:4290:-385.035,-36.1236,0	1/1:112:0,112:0:0:112:3987:-356.654,-33.7154,0	1/1:235:0,235:0:0:235:8378:-750.542,-70.7421,0	1/1:48:0,48:0:0:48:1716:-152.838,-14.4494,0	0/1:113:55,58:55:1951:58:2075:-151.8,0,-141.849	1/1:123:1,121:1:36:121:4332:-383.212,-33.4852,0	1/1:85:0,85:0:0:85:2992:-267.522,-25.5876,0	0/1:116:62,54:62:2196:54:1923:-136.69,0,-162.983	0/1:103:70,33:70:2498:33:1184:-75.1539,0,-194.066	1/1:85:0,85:0:0:85:3034:-272.945,-25.5876,0	1/1:174:0,173:0:0:173:6216:-557.036,-52.0782,0
chr08	27590675	.	C	T	242101	PASS	AB=0.513221;ABP=6.51271;AC=166;AF=0.882979;AN=188;AO=8619;CIGAR=1X;DP=9755;DPB=9755;DPRA=0;EPP=1632.27;EPPR=558.833;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.9652;MQMR=59.9938;NS=94;NUMALT=1;ODDS=10.0483;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=307750;QR=40452;RO=1135;RPL=94;RPP=17911.4;RPPR=2313.76;RPR=8525;RUN=1;SAF=5673;SAP=1876.57;SAR=2946;SRF=855;SRP=635.559;SRR=280;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:83:0,83:0:0:83:2956:-266.272,-24.9855,0	1/1:59:0,59:0:0:59:2120:-191.068,-17.7608,0	1/1:94:0,94:0:0:94:3362:-302.796,-28.2968,0	1/1:25:0,25:0:0:25:877:-79.2452,-7.52575,0	1/1:36:0,36:0:0:36:1292:-116.584,-10.8371,0	1/1:81:0,81:0:0:81:2889:-260.246,-24.3834,0	1/1:88:0,88:0:0:88:3127:-281.377,-26.4906,0	1/1:65:0,65:0:0:65:2325:-209.423,-19.567,0	1/1:44:0,44:0:0:44:1577:-141.593,-13.2453,0	1/1:303:0,303:0:0:303:10822:-973.878,-91.2121,0	1/1:109:0,109:0:0:109:3896:-350.835,-32.8123,0	1/1:140:0,140:0:0:140:5013:-451.316,-42.1442,0	1/1:122:0,122:0:0:122:4379:-394.282,-36.7257,0	1/1:110:0,110:0:0:110:3928:-353.714,-33.1133,0	1/1:119:0,119:0:0:119:4257:-383.306,-35.8226,0	1/1:115:0,115:0:0:115:4123:-371.253,-34.6185,0	1/1:101:0,101:0:0:101:3609:-325.016,-30.404,0	1/1:189:0,189:0:0:189:6712:-604.156,-56.8947,0	1/1:96:1,95:1:36:95:3358:-298.822,-25.3006,0	1/1:79:0,79:0:0:79:2810:-253.139,-23.7814,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:31:0,31:0:0:31:1112:-100.391,-9.33193,0	0/1:73:28,45:28:1008:45:1620:-124.115,0,-69.0612	1/1:33:0,33:0:0:33:1158:-104.525,-9.93399,0	0/1:118:58,60:58:2040:60:2135:-156.896,0,-148.348	1/1:92:0,92:0:0:92:3289:-296.226,-27.6948,0	0/1:62:36,26:36:1279:26:936:-65.8956,0,-96.7486	1/1:93:0,93:0:0:93:3348:-301.535,-27.9958,0	1/1:39:0,39:0:0:39:1392:-125.579,-11.7402,0	0/1:65:38,27:38:1344:27:958:-66.9634,0,-101.693	0/1:126:56,70:56:2000:70:2498:-187.142,0,-142.344	1/1:154:0,154:0:0:154:5495:-494.678,-46.3586,0	0/1:77:29,48:29:1036:48:1707:-130.736,0,-70.3746	1/1:287:1,286:1:36:286:10222:-916.31,-82.7973,0	0/1:129:55,74:55:1946:74:2640:-199.014,0,-136.582	1/1:228:1,227:1:36:227:8115:-726.767,-65.0366,0	1/1:29:0,29:0:0:29:1027:-92.7246,-8.72987,0	1/1:282:0,282:0:0:282:10078:-906.954,-84.8905,0	1/1:74:1,73:1:36:73:2595:-230.2,-18.6779,0	0/1:69:36,33:36:1279:33:1180:-85.737,0,-94.6414	0/1:201:99,101:99:3523:101:3594:-263.198,0,-256.814	1/1:53:2,51:2:72:51:1794:-154.872,-9.11787,0	1/1:117:0,117:0:0:117:4180:-376.38,-35.2205,0	1/1:99:0,99:0:0:99:3529:-317.819,-29.802,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	1/1:42:0,42:0:0:42:1512:-136.375,-12.6433,0	0/1:67:29,38:29:1040:38:1352:-101.811,0,-73.7454	1/1:47:0,47:0:0:47:1680:-151.487,-14.1484,0	1/1:84:0,84:0:0:84:3003:-270.501,-25.2865,0	1/1:96:0,96:0:0:96:3421:-308.103,-28.8989,0	0/1:204:100,104:100:3563:104:3736:-275.029,0,-259.469	0/1:52:27,25:27:964:25:896:-65.3068,0,-71.4233	0/1:19:8,11:8:288:11:392:-29.9005,0,-20.5478	0/1:78:31,47:31:1104:47:1669:-127.007,0,-76.1903	0/1:52:26,26:26:932:26:928:-68.1847,0,-68.5453	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	1/1:104:0,104:0:0:104:3716:-334.641,-31.3071,0	1/1:178:3,175:3:108:175:6261:-553.5,-43.5082,0	1/1:27:0,27:0:0:27:965:-87.167,-8.12781,0	1/1:115:0,115:0:0:115:4132:-372.062,-34.6185,0	1/1:130:0,130:0:0:130:4660:-419.559,-39.1339,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:91:2,89:2:57:89:3137:-277.143,-21.9804,0	0/1:32:18,14:18:648:14:504:-36.0651,0,-49.0189	1/1:68:0,68:0:0:68:2436:-219.495,-20.47,0	1/1:80:0,80:0:0:80:2848:-256.556,-24.0824,0	1/1:52:0,52:0:0:52:1864:-168.039,-15.6536,0	1/1:291:0,291:0:0:291:10338:-930.348,-87.5997,0	1/1:39:0,39:0:0:39:1391:-125.488,-11.7402,0	1/1:147:0,147:0:0:147:5280:-475.228,-44.2514,0	0/1:162:81,81:81:2908:81:2889:-211.478,0,-213.182	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	0/1:26:13,13:13:459:13:468:-34.6329,0,-33.8173	1/1:89:0,89:0:0:89:3163:-284.896,-26.7917,0	1/1:79:0,79:0:0:79:2830:-254.938,-23.7814,0	1/1:47:0,47:0:0:47:1688:-152.207,-14.1484,0	1/1:84:0,84:0:0:84:2992:-269.51,-25.2865,0	1/1:212:0,212:0:0:212:7558:-680.263,-63.8184,0	1/1:67:1,66:1:36:66:2359:-208.97,-16.5707,0	0/1:46:17,29:17:608:29:1036:-79.7065,0,-41.2046	1/1:97:0,97:0:0:97:3449:-310.623,-29.1999,0	1/1:145:0,145:0:0:145:5152:-463.819,-43.6494,0	1/1:99:0,99:0:0:99:3562:-320.786,-29.802,0	1/1:146:0,146:0:0:146:5248:-472.454,-43.9504,0	1/1:191:1,190:1:36:190:6775:-606.224,-53.8985,0	1/1:60:0,60:0:0:60:2145:-193.317,-18.0618,0	0/1:120:54,66:54:1932:66:2359:-176.445,0,-138.033	1/1:107:0,107:0:0:107:3838:-345.615,-32.2102,0	1/1:403:0,403:0:0:403:14360:-1292.15,-121.315,0	0/1:437:215,222:215:7685:222:7902:-579.651,0,-560.134	0/1:92:68,24:68:2413:24:860:-50.0271,0,-189.731	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:183:0,183:0:0:183:6530:-587.782,-55.0885,0
chr08	27728101	.	TGATTAAAAAGAT	TATTTAAAAGAT,TAATTAAAAGAT	138146	PASS	AB=0.527331,0.462219;ABP=11.0818,18.434;AC=165,23;AF=0.87766,0.12234;AN=188;AO=5788,582;CIGAR=1M1D3M1X7M,1M1X3M1D7M;DP=6422;DPB=5928.46;DPRA=0,0.896649;EPP=12484.8,1266.81;EPPR=0;GTI=2;LEN=12,12;MEANALT=1.81915,2.58621;MQM=49.6104,48.8729;MQMR=0;NS=94;NUMALT=2;ODDS=2.32233;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=202415,20286;QR=0;RO=0;RPL=10,0;RPP=12484.8,1266.81;RPPR=0;RPR=5778,582;RUN=1,1;SAF=5788,582;SAP=12571.5,1266.81;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:121:0,120,0:0:0:120,0:4142,0:-369.292,-36.1236,0,-369.292,-36.1236,-369.292	1/1:58:0,58,0:0:0:58,0:2046,0:-182.863,-17.4597,0,-182.863,-17.4597,-182.863	1/1:182:0,181,0:0:0:181,0:6314,0:-562.403,-54.4864,0,-562.403,-54.4864,-562.403	1/1:146:0,144,0:0:0:144,0:5039,0:-451.572,-43.3483,0,-451.572,-43.3483,-451.572	1/1:66:0,66,0:0:0:66,0:2263,0:-202.837,-19.868,0,-202.837,-19.868,-202.837	1/1:49:0,49,0:0:0:49,0:1723,0:-153.813,-14.7505,0,-153.813,-14.7505,-153.813	1/1:25:0,25,0:0:0:25,0:864,0:-77.8561,-7.52575,0,-77.8561,-7.52575,-77.8561	1/1:119:0,117,1:0:0:117,1:4088,29:-364.293,-35.2205,0,-361.991,-32.893,-361.69	1/1:45:0,43,1:0:0:43,1:1478,36:-131.62,-12.9443,0,-128.71,-9.97682,-128.409	1/1:47:0,47,0:0:0:47,0:1655,0:-148.76,-14.1484,0,-148.76,-14.1484,-148.76	1/1:9:0,9,0:0:0:9,0:317,0:-28.7812,-2.70927,0,-28.7812,-2.70927,-28.7812	1/1:33:0,33,0:0:0:33,0:1160,0:-103.832,-9.93399,0,-103.832,-9.93399,-103.832	1/1:32:0,31,0:0:0:31,0:1108,0:-98.8968,-9.33193,0,-98.8968,-9.33193,-98.8968	1/1:19:0,19,0:0:0:19,0:659,0:-59.2133,-5.71957,0,-59.2133,-5.71957,-59.2133	1/1:17:0,15,0:0:0:15,0:538,0:-48.2466,-4.51545,0,-48.2466,-4.51545,-48.2466	1/1:16:0,16,0:0:0:16,0:564,0:-50.8428,-4.81648,0,-50.8428,-4.81648,-50.8428	1/1:8:0,8,0:0:0:8,0:280,0:-25.2174,-2.40824,0,-25.2174,-2.40824,-25.2174	1/1:8:0,8,0:0:0:8,0:280,0:-25.3331,-2.40824,0,-25.3331,-2.40824,-25.3331	1/1:5:0,5,0:0:0:5,0:180,0:-16.4073,-1.50515,0,-16.4073,-1.50515,-16.4073	1/1:170:0,170,0:0:0:170,0:5957,0:-533.425,-51.1751,0,-533.425,-51.1751,-533.425	1/1:84:0,84,0:0:0:84,0:2921,0:-261.855,-25.2865,0,-261.855,-25.2865,-261.855	1/1:188:0,182,0:0:0:182,0:6375,0:-572.358,-54.7875,0,-572.358,-54.7875,-572.358	1/1:104:0,103,0:0:0:103,0:3591,0:-321.621,-31.0061,0,-321.621,-31.0061,-321.621	1/2:62:0,29,33:0:0:29,33:996,1160:-174.171,-94.2327,-85.5028,-80.2824,0,-70.3484	1/1:85:0,83,0:0:0:83,0:2924,0:-261.405,-24.9855,0,-261.405,-24.9855,-261.405	1/2:179:0,85,93:0:0:85,93:2999,3261:-508.278,-264.505,-238.918,-243.804,0,-215.808	1/1:166:0,165,0:0:0:165,0:5738,0:-513.298,-49.67,0,-513.298,-49.67,-513.298	1/2:9:0,3,6:0:0:3,6:108,215:-26.5494,-17.7893,-16.8862,-9.11746,0,-7.31128	1/1:227:0,226,0:0:0:226,0:7846,0:-703.852,-68.0328,0,-703.852,-68.0328,-703.852	1/1:104:0,101,2:0:0:101,2:3536,65:-315.477,-30.404,0,-310.25,-25.1802,-309.648	1/2:55:0,35,19:0:0:35,19:1234,648:-152.382,-52.5044,-41.9683,-100.013,0,-94.293	1/2:16:0,8,8:0:0:8,8:278,268:-44.156,-21.6595,-19.2512,-22.8343,0,-20.4261	1/1:33:0,33,0:0:0:33,0:1153,0:-103.329,-9.93399,0,-103.329,-9.93399,-103.329	1/2:4:0,2,2:0:0:2,2:72,71:-11.9067,-6.08618,-5.48412,-6.17488,0,-5.57282	1/1:13:0,13,0:0:0:13,0:457,0:-40.5906,-3.91339,0,-40.5906,-3.91339,-40.5906	1/2:23:0,12,11:0:0:12,11:416,356:-62.147,-28.7452,-25.1329,-33.7329,0,-30.4215	1/1:50:0,50,0:0:0:50,0:1765,0:-158.712,-15.0515,0,-158.712,-15.0515,-158.712	1/1:156:0,156,0:0:0:156,0:5439,0:-486.841,-46.9607,0,-486.841,-46.9607,-486.841	1/2:13:0,6,7:0:0:6,7:214,247:-37.5743,-20.2873,-18.4811,-17.6389,0,-15.5317	1/1:8:0,8,0:0:0:8,0:286,0:-25.9503,-2.40824,0,-25.9503,-2.40824,-25.9503	1/2:122:0,85,36:0:0:85,36:2978,1261:-343.111,-102.075,-76.4872,-241.059,0,-230.222	1/2:5:0,2,3:0:0:2,3:72,107:-14.8837,-9.02812,-8.42606,-6.21261,0,-5.30952	1/1:144:0,144,0:0:0:144,0:5035,0:-449.614,-43.3483,0,-449.614,-43.3483,-449.614	1/1:11:0,11,0:0:0:11,0:388,0:-35.1517,-3.31133,0,-35.1517,-3.31133,-35.1517	1/1:13:0,13,0:0:0:13,0:457,0:-41.351,-3.91339,0,-41.351,-3.91339,-41.351	1/1:119:0,118,0:0:0:118,0:4103,0:-368.633,-35.5215,0,-368.633,-35.5215,-368.633	1/1:147:0,147,0:0:0:147,0:5115,0:-455.505,-44.2514,0,-455.505,-44.2514,-455.505	1/2:164:0,90,72:0:0:90,72:3172,2498:-458.201,-201.236,-174.144,-256.97,0,-235.296	1/1:138:0,137,0:0:0:137,0:4794,0:-429.703,-41.2411,0,-429.703,-41.2411,-429.703	1/1:85:0,84,0:0:0:84,0:2945,0:-263.613,-25.2865,0,-263.613,-25.2865,-263.613	1/1:103:0,102,1:0:0:102,1:3577,28:-321.355,-30.7051,0,-319.137,-28.2064,-318.836	1/2:24:0,14,10:0:0:14,10:496,349:-68.9224,-28.6474,-24.433,-40.625,0,-37.6147	1/2:217:0,101,115:0:0:101,115:3522,4049:-610.042,-326.051,-295.647,-284.047,0,-249.429	1/2:11:0,3,8:0:0:3,8:107,276:-31.4506,-22.7377,-21.8346,-9.06576,0,-6.65752	1/2:12:0,2,10:0:0:2,10:71,346:-33.5272,-27.8043,-27.2022,-6.0721,0,-3.0618	1/2:70:0,32,35:0:0:32,35:1119,1229:-189.524,-99.0879,-89.455,-90.4656,0,-79.9296	1/1:50:0,50,0:0:0:50,0:1766,0:-158.517,-15.0515,0,-158.517,-15.0515,-158.517	1/1:14:0,14,0:0: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chr08	28648318	.	A	G	15174	PASS	AB=0.468361;ABP=20.4611;AC=21;AF=0.111702;AN=188;AO=960;CIGAR=1X;DP=10134;DPB=10134;DPRA=1.17908;EPP=2070.29;EPPR=19867.7;GTI=1;LEN=1;MEANALT=1.02941;MQM=59.9344;MQMR=59.993;NS=94;NUMALT=1;ODDS=5.00115;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34002;QR=327952;RO=9172;RPL=958;RPP=2070.29;RPPR=19867.7;RPR=2;RUN=1;SAF=960;SAP=2087.62;SAR=0;SRF=9172;SRP=19919.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:136:136,0:136:4866:0:0:0,-40.9401,-438.092	0/0:128:127,0:127:4547:0:0:0,-38.2308,-409.125	0/0:224:223,1:223:7982:1:36:0,-63.8324,-714.803	0/0:86:85,1:85:3032:1:36:0,-22.2903,-269.511	0/0:78:78,0:78:2792:0:0:0,-23.4803,-251.52	0/0:189:189,0:189:6792:0:0:0,-56.8947,-611.349	0/0:152:152,0:152:5422:0:0:0,-45.7566,-488.11	0/0:131:131,0:131:4671:0:0:0,-39.4349,-420.55	0/0:117:117,0:117:4183:0:0:0,-35.2205,-376.652	0/0:91:91,0:91:3246:0:0:0,-27.3937,-292.361	0/0:73:73,0:73:2606:0:0:0,-21.9752,-234.787	0/0:71:71,0:71:2556:0:0:0,-21.3731,-230.29	0/0:73:73,0:73:2611:0:0:0,-21.9752,-235.237	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/0:57:57,0:57:2010:0:0:0,-17.1587,-181.172	0/0:59:59,0:59:2112:0:0:0,-17.7608,-190.349	0/0:68:68,0:68:2410:0:0:0,-20.47,-217.156	0/0:66:66,0:66:2350:0:0:0,-19.868,-211.758	0/0:266:265,1:265:9482:1:36:0,-76.4757,-849.74	0/0:200:200,0:200:7156:0:0:0,-60.206,-644.097	0/0:127:127,0:127:4556:0:0:0,-38.2308,-410.205	0/0:83:82,1:82:2932:1:36:0,-21.3872,-260.516	0/1:99:66,33:66:2343:33:1162:-75.0833,0,-181.327	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/1:286:154,132:154:5484:132:4705:-337.517,0,-407.594	0/0:186:186,0:186:6664:0:0:0,-55.9916,-599.837	0/1:37:24,13:24:864:13:468:-31.3215,0,-66.9445	0/0:286:286,0:286:10236:0:0:0,-86.0946,-921.168	0/0:166:163,3:163:5807:3:108:0,-39.9006,-512.676	0/1:127:62,65:62:2220:65:2308:-169.743,0,-161.834	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:9:9,0:9:315:0:0:0,-2.70927,-28.6872	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	0/0:221:221,0:221:7931:0:0:0,-66.5276,-713.811	0/0:237:235,2:235:8415:2:72:0,-64.5074,-750.516	0/0:90:90,0:90:3202:0:0:0,-27.0927,-288.403	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/1:184:102,82:102:3642:82:2906:-206.387,0,-272.595	0/1:55:20,35:20:716:35:1178:-89.7568,0,-48.2111	0/0:95:95,0:95:3404:0:0:0,-28.5978,-306.529	0/0:88:88,0:88:3147:0:0:0,-26.4906,-283.455	0/0:72:72,0:72:2563:0:0:0,-21.6742,-230.92	0/0:125:124,1:124:4436:1:36:0,-34.0305,-395.813	0/0:137:135,2:135:4817:2:72:0,-34.4044,-426.848	0/1:160:95,65:95:3399:65:2298:-158.916,0,-257.959	0/0:168:168,0:168:5990:0:0:0,-50.573,-539.208	0/0:143:143,0:143:5140:0:0:0,-43.0473,-462.739	0/0:61:60,1:60:2156:1:36:0,-14.7646,-190.709	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:120:74,46:74:2635:46:1631:-110.954,0,-201.273	0/0:43:43,0:43:1532:0:0:0,-12.9443,-138.173	0/1:25:14,11:14:500:11:383:-27.2775,0,-37.8104	0/1:142:80,62:80:2868:62:2181:-153.808,0,-215.611	0/0:69:69,0:69:2468:0:0:0,-20.7711,-222.374	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/0:151:151,0:151:5396:0:0:0,-45.4555,-485.772	0/0:108:108,0:108:3848:0:0:0,-32.5112,-346.515	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:199:199,0:199:7108:0:0:0,-59.905,-639.781	0/0:221:219,2:219:7851:2:72:0,-59.6909,-699.776	0/1:80:49,31:49:1743:31:1108:-75.9486,0,-133.071	0/0:120:120,0:120:4283:0:0:0,-36.1236,-385.648	0/0:212:209,3:209:7475:3:108:0,-53.7432,-662.719	0/0:133:133,0:133:4775:0:0:0,-40.037,-429.905	0/0:38:38,0:38:1331:0:0:0,-11.4391,-120.082	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.592	0/0:88:88,0:88:3146:0:0:0,-26.4906,-283.364	0/1:24:8,16:8:288:16:568:-44.2271,0,-19.0427	0/0:120:119,1:119:4276:1:36:0,-32.5253,-381.418	0/1:58:40,18:40:1428:18:629:-39.474,0,-111.358	0/0:228:228,0:228:8180:0:0:0,-68.6348,-736.077	0/0:168:168,0:168:6012:0:0:0,-50.573,-541.185	0/1:106:44,62:44:1572:62:2208:-167.068,0,-109.862	0/0:115:115,0:115:4104:0:0:0,-34.6184,-369.547	0/0:15:15,0:15:527:0:0:0,-4.51545,-47.7602	0/0:110:110,0:110:3932:0:0:0,-33.1133,-354.073	0/1:124:61,62:61:2180:62:2215:-162.214,0,-159.08	0/0:345:345,0:345:12355:0:0:0,-103.855,-1111.79	0/0:120:120,0:120:4295:0:0:0,-36.1236,-386.727	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/0:78:78,0:78:2791:0:0:0,-23.4803,-251.43	0/0:157:157,0:157:5613:0:0:0,-47.2617,-505.29	0/0:48:48,0:48:1711:0:0:0,-14.4494,-154.275	0/1:67:34,33:34:1220:33:1162:-84.7134,0,-89.9378	0/1:78:35,43:35:1256:43:1527:-114.242,0,-89.8649	0/0:52:52,0:52:1851:0:0:0,-15.6536,-166.869	0/1:117:58,59:58:2060:59:2094:-153.508,0,-150.448	0/1:96:29,67:29:1015:67:2375:-185.099,0,-62.762	0/0:114:113,1:113:4022:1:32:0,-31.1181,-358.97	0/0:112:112,0:112:4012:0:0:0,-33.7154,-361.269
chr08	28906750	.	T	C	693608	PASS	AB=0.561845;ABP=120.385;AC=171;AF=0.909574;AN=188;AO=30604;CIGAR=1X;DP=32248;DPB=32248;DPRA=0;EPP=66458.8;EPPR=3542.51;GTI=1;LEN=1;MEANALT=1.12766;MQM=59.9616;MQMR=59.9945;NS=94;NUMALT=1;ODDS=47.1742;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1094006;QR=57693;RO=1630;RPL=30604;RPP=66458.8;RPPR=3542.51;RPR=0;RUN=1;SAF=0;SAP=66458.8;SAR=30604;SRF=0;SRP=3542.51;SRR=1630;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:48:0,48:0:0:48:1720:-155.086,-14.4494,0	1/1:349:0,349:0:0:349:12494:-1124.29,-105.059,0	1/1:216:0,216:0:0:216:7704:-693.394,-65.0225,0	1/1:289:1,287:1:36:287:10250:-918.828,-83.4582,0	1/1:107:0,107:0:0:107:3829:-344.79,-32.2102,0	1/1:35:0,35:0:0:35:1252:-112.982,-10.5361,0	1/1:187:1,186:1:36:186:6584:-589.041,-52.6943,0	1/1:377:0,377:0:0:377:13447:-1210.02,-113.488,0	1/1:119:0,119:0:0:119:4230:-380.88,-35.8226,0	1/1:184:1,183:1:36:183:6561:-586.97,-51.7912,0	1/1:408:1,407:1:36:407:14569:-1307.35,-119.222,0	1/1:47:0,47:0:0:47:1692:-152.567,-14.1484,0	1/1:76:0,76:0:0:76:2709:-243.863,-22.8783,0	1/1:78:0,78:0:0:78:2784:-250.801,-23.4803,0	1/1:31:0,31:0:0:31:1103:-99.579,-9.33193,0	1/1:54:0,54:0:0:54:1918:-172.894,-16.2556,0	1/1:72:0,72:0:0:72:2584:-232.809,-21.6742,0	1/1:54:0,54:0:0:54:1940:-174.876,-16.2556,0	1/1:217:0,217:0:0:217:7799:-701.932,-65.3235,0	1/1:229:0,229:0:0:229:8179:-736.12,-68.9359,0	1/1:261:0,261:0:0:261:9334:-839.967,-78.5688,0	1/1:188:0,187:0:0:187:6693:-602.084,-56.2926,0	1/1:75:0,75:0:0:75:2696:-242.881,-22.5773,0	0/1:206:99,107:99:3526:107:3814:-281.443,0,-255.535	1/1:89:0,89:0:0:89:3172:-285.704,-26.7917,0	0/1:617:261,356:261:9229:356:12670:-954.281,0,-644.85	1/1:397:0,397:0:0:397:14184:-1276.32,-119.509,0	0/1:37:27,10:27:945:10:360:-21.6062,0,-74.2241	1/1:475:1,474:1:36:474:16966:-1522.98,-139.391,0	1/1:368:8,360:8:288:360:12920:-1136.34,-84.5116,0	0/1:217:103,114:103:3685:114:4062:-300.439,0,-266.525	1/1:900:6,894:6:208:894:32006:-2860.45,-251.868,0	1/1:1312:1,1310:1:32:1310:46841:-4209.99,-391.791,0	1/1:745:12,733:12:432:733:26241:-2320.5,-185.046,0	1/1:2577:2,2574:2:72:2574:91851:-8255.94,-768.976,0	1/1:516:8,507:8:273:507:18142:-1607.19,-130.488,0	1/1:133:0,133:0:0:133:4772:-429.636,-40.037,0	1/1:383:2,381:2:72:381:13547:-1212.17,-108.458,0	1/1:470:2,468:2:68:468:16745:-1500.25,-135.026,0	1/1:822:1,821:1:36:821:29364:-2638.27,-243.848,0	0/1:256:121,135:121:4210:135:4815:-356.436,0,-302.016	0/1:87:13,74:13:453:74:2648:-212.377,0,-14.91	1/1:271:0,271:0:0:271:9710:-873.845,-81.5791,0	1/1:46:0,46:0:0:46:1622:-146.265,-13.8474,0	1/1:37:0,37:0:0:37:1324:-119.46,-11.1381,0	1/1:129:0,129:0:0:129:4617:-415.692,-38.8329,0	1/1:190:0,189:0:0:189:6775:-609.44,-56.8947,0	0/1:334:178,156:178:6273:156:5592:-402.858,0,-464.123	1/1:401:0,401:0:0:401:14358:-1291.97,-120.713,0	1/1:485:0,484:0:0:484:17320:-1558.06,-145.699,0	1/1:209:0,209:0:0:209:7466:-671.981,-62.9153,0	1/1:2840:1,2837:1:36:2837:101345:-9113.33,-851.085,0	0/1:256:115,141:115:4050:141:5020:-374.882,0,-287.627	1/1:160:0,160:0:0:160:5711:-514.108,-48.1648,0	1/1:728:9,718:9:324:718:25651:-2277.54,-189.703,0	0/1:183:67,116:67:2340:116:4134:-317.154,0,-155.765	1/1:65:0,65:0:0:65:2320:-209.058,-19.567,0	1/1:1896:0,1895:0:0:1895:67729:-6091.96,-570.452,0	1/1:1290:0,1290:0:0:1290:46042:-4142.17,-388.329,0	1/1:65:0,65:0:0:65:2332:-210.137,-19.567,0	1/1:83:0,83:0:0:83:2980:-268.432,-24.9855,0	1/1:893:0,893:0:0:893:31911:-2871,-268.82,0	1/1:107:0,107:0:0:107:3825:-344.446,-32.2102,0	1/1:408:7,401:7:248:401:14306:-1264.63,-100.156,0	0/1:145:43,102:43:1510:102:3614:-281.794,0,-92.5398	1/1:214:0,214:0:0:214:7637:-687.364,-64.4204,0	1/1:242:1,241:1:36:241:8604:-770.756,-69.251,0	1/1:83:1,82:1:36:82:2937:-260.964,-21.3872,0	1/1:308:0,308:0:0:308:11043:-993.758,-92.7172,0	1/1:133:0,133:0:0:133:4774:-429.815,-40.037,0	1/1:54:0,54:0:0:54:1944:-175.234,-16.2556,0	1/1:562:13,549:13:453:549:19650:-1726.93,-128.079,0	1/1:110:0,110:0:0:110:3948:-355.502,-33.1133,0	0/1:119:55,64:55:1972:64:2288:-170.337,0,-141.932	1/1:241:1,240:1:36:240:8584:-768.957,-68.95,0	1/1:230:0,230:0:0:230:8263:-743.676,-69.2369,0	0/1:207:111,96:111:3965:96:3424:-246.062,0,-294.727	1/1:218:1,216:1:36:216:7708:-690.227,-62.0101,0	1/1:1576:0,1574:0:0:1574:56377:-5070.31,-473.821,0	1/1:225:0,225:0:0:225:8057:-725.142,-67.7318,0	0/1:217:127,90:127:4488:90:3206:-223.439,0,-338.764	1/1:430:0,430:0:0:430:15358:-1381.88,-129.443,0	1/1:79:0,79:0:0:79:2832:-255.114,-23.7814,0	1/1:59:0,59:0:0:59:2115:-190.619,-17.7608,0	1/1:70:0,70:0:0:70:2496:-224.893,-21.0721,0	1/1:100:0,100:0:0:100:3572:-321.688,-30.103,0	1/1:32:0,32:0:0:32:1148:-103.63,-9.63296,0	0/1:73:47,26:47:1684:26:932:-62.2237,0,-129.872	0/1:77:43,34:43:1544:34:1220:-86.9275,0,-116.074	1/1:482:0,482:0:0:482:17307:-1557.25,-145.096,0	0/1:424:78,346:78:2777:346:12376:-985.974,0,-122.533	0/1:78:60,18:60:2140:18:648:-35.1715,0,-169.388	1/1:10:0,10:0:0:10:349:-31.7447,-3.0103,0	1/1:66:1,65:1:36:65:2314:-204.921,-16.2697,0
chr08	29108809	.	G	A	260.194	PASS	AB=0.215969;ABP=4373.41;AC=61;AF=0.324468;AN=188;AO=1624;CIGAR=1X;DP=12265;DPB=12265;DPRA=0.655218;EPP=3529.48;EPPR=23090.1;GTI=52;LEN=1;MEANALT=1.05682;MQM=23.8276;MQMR=42.9269;NS=94;NUMALT=1;ODDS=59.9118;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58182;QR=379558;RO=10636;RPL=0;RPP=3529.48;RPPR=23098.8;RPR=1624;RUN=1;SAF=1624;SAP=3529.48;SAR=0;SRF=10635;SRP=23090.1;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:33,7:33:1165:7:252:-1.31294,0,-81.8109	0/1:84:57,27:57:2040:27:964:-25.5909,0,-129.649	0/1:119:100,19:100:3564:19:672:-1.06338,0,-226.964	0/0:59:52,7:52:1868:7:252:0,-1.97257,-123.582	0/0:33:32,1:32:1152:1:36:0,-7.65512,-82.5538	0/1:37:29,8:29:1032:8:288:-4.09396,0,-72.3003	0/1:56:43,13:43:1514:13:464:-12.2103,0,-94.8851	0/1:99:80,19:80:2834:19:684:-6.08729,0,-179.978	0/1:73:54,19:54:1924:19:680:-13.8964,0,-135.132	0/1:57:49,8:49:1756:8:284:-0.808012,0,-119.879	0/0:463:421,42:421:14932:42:1508:0,-46.0921,-1147.36	0/1:131:97,34:97:3480:34:1224:-24.6232,0,-237.862	0/1:175:134,41:134:4785:41:1472:-24.5058,0,-312.321	0/1:217:166,51:166:5872:51:1832:-39.4771,0,-316.219	0/1:166:120,45:120:4312:45:1620:-50.2397,0,-243.432	0/1:139:113,26:113:4064:26:932:-11.6829,0,-250.546	0/1:112:78,34:78:2792:34:1220:-30.3252,0,-158.405	0/1:63:47,16:47:1692:16:568:-11.2552,0,-101.079	0/0:227:212,15:212:7568:15:540:0,-39.9563,-629.302	0/1:80:67,13:67:2408:13:468:-4.68572,0,-150.287	0/1:82:63,19:63:2245:19:676:-14.4575,0,-140.563	0/1:38:32,6:32:1152:6:216:-3.12816,0,-71.4563	0/1:46:38,8:38:1341:8:288:-4.16103,0,-96.6946	0/1:52:43,9:43:1548:9:324:-3.03314,0,-86.6751	0/1:46:39,7:39:1396:7:248:-0.709822,0,-94.6399	0/1:162:134,28:134:4789:28:992:-17.998,0,-309.135	0/0:75:66,9:66:2357:9:324:0,-3.89055,-141.55	0/0:48:42,6:42:1508:6:216:0,-1.91568,-96.6793	0/1:159:133,26:133:4765:26:932:-14.1529,0,-268.413	0/1:67:57,10:57:2025:10:352:-0.51385,0,-134.02	0/1:63:51,12:51:1824:12:428:-7.72622,0,-110.418	0/0:101:98,2:98:3478:2:72:0,-25.9888,-301.298	0/0:186:184,2:184:6566:2:72:0,-51.8444,-579.346	0/0:141:138,3:138:4905:3:108:0,-36.6028,-426.409	0/0:361:361,0:361:12872:0:0:0,-108.672,-1145.82	0/0:137:136,1:136:4799:1:36:0,-39.1545,-422.867	0/1:410:333,77:333:11869:77:2760:-59.3862,0,-681.929	0/1:25:21,4:21:748:4:140:-0.878193,0,-47.2197	0/0:365:344,21:344:12280:21:752:0,-70.2485,-1031.31	0/0:128:128,0:128:4570:0:0:0,-38.5318,-407.395	0/1:138:112,26:112:3993:26:936:-12.0112,0,-248.39	0/0:155:143,12:143:5117:12:428:0,-21.8474,-371.474	0/0:98:84,14:84:2993:14:504:0,-0.559347,-186.409	0/1:76:61,15:61:2192:15:540:-10.5011,0,-136.315	0/1:118:95,23:95:3370:23:824:-15.7488,0,-203.631	0/0:45:40,5:40:1428:5:176:0,-1.42509,-100.542	0/1:68:51,17:51:1820:17:612:-14.0205,0,-113.458	0/1:109:92,17:92:3292:17:608:-5.13669,0,-182.618	0/1:44:38,6:38:1364:6:216:-0.322661,0,-95.3636	0/0:110:96,13:96:3421:13:456:0,-4.16999,-220.381	0/1:72:53,18:53:1873:18:648:-21.4501,0,-133.081	0/0:205:205,0:205:7317:0:0:0,-61.7111,-654.256	0/0:72:61,11:61:2180:11:396:0,-0.808311,-157.811	0/1:37:28,9:28:992:9:316:-10.457,0,-68.5911	0/0:51:51,0:51:1828:0:0:0,-15.3525,-162.577	0/1:118:88,30:88:3145:30:1076:-26.2085,0,-181.8	0/1:22:19,3:19:672:3:108:-0.284676,0,-48.7996	0/0:166:166,0:166:5911:0:0:0,-49.971,-529.531	0/0:148:147,1:147:5257:1:36:0,-41.9038,-462.229	0/1:38:31,7:31:1112:7:248:-2.94226,0,-77.4793	0/1:187:144,43:144:5164:43:1544:-39.2124,0,-295.678	0/0:160:158,2:158:5641:2:72:0,-42.4937,-498.389	0/1:24:21,3:21:741:3:108:-0.19136,0,-43.9103	0/1:137:103,34:103:3689:34:1224:-34.4929,0,-211.053	0/0:51:45,6:45:1559:6:216:0,-2.81877,-99.3683	0/1:60:50,10:50:1754:10:345:-3.92161,0,-110.987	0/0:60:59,1:59:2101:1:36:0,-15.5949,-152.387	0/1:127:90,37:90:3232:37:1332:-45.0154,0,-192.17	0/0:563:544,19:544:19462:19:684:0,-129.393,-1659.99	0/1:40:32,8:32:1148:8:284:-4.36023,0,-79.6384	0/1:86:66,20:66:2368:20:701:-21.2414,0,-134.817	0/0:115:112,3:112:3982:3:108:0,-27.7111,-340.831	0/1:43:33,10:33:1173:10:360:-6.04363,0,-73.0787	0/1:92:60,32:60:2129:32:1152:-33.7825,0,-123.255	0/1:207:167,40:167:5928:40:1436:-19.7531,0,-348.151	0/1:152:124,28:124:4448:28:1008:-16.6562,0,-256.333	0/0:48:41,7:41:1468:7:252:0,-1.0953,-100.918	0/1:98:82,16:82:2932:16:572:-0.736846,0,-184.604	0/0:245:245,0:245:8731:0:0:0,-73.7523,-780.458	0/1:73:58,15:58:2073:15:540:-9.01738,0,-123.968	0/1:55:43,12:43:1521:12:432:-6.18713,0,-101.774	0/1:194:159,35:159:5667:35:1252:-19.4719,0,-344.759	0/1:110:87,23:87:3097:23:828:-18.1983,0,-176.188	0/1:201:159,42:159:5696:42:1504:-32.9062,0,-356.791	0/1:134:110,24:110:3956:24:856:-13.5053,0,-227.446	0/0:216:187,29:187:6662:29:1044:0,-0.389554,-434.074	0/1:27:17,10:17:608:10:352:-10.8246,0,-40.672	0/1:73:53,20:53:1904:20:712:-15.7567,0,-126.981	0/1:116:91,24:91:3256:24:860:-10.4341,0,-216.824	0/0:478:469,9:469:16761:9:324:0,-125.206,-1438.42	0/0:590:565,25:565:20182:25:900:0,-126.279,-1652.39	0/0:128:117,11:117:4192:11:392:0,-13.9043,-301.457	0/1:90:66,24:66:2364:24:860:-26.3978,0,-113.84	0/1:273:193,80:193:6901:80:2868:-95.2343,0,-386.711
chr08	29108822	.	GGACGT	GGATGT,GGATGC	638078	PASS	AB=0.695091,0.185101;ABP=9268.73,24143.7;AC=120,68;AF=0.638298,0.361702;AN=188;AO=25584,5576;CIGAR=3M1X2M,3M1X1M1X;DP=34858;DPB=34956.3;DPRA=0,2.13106;EPP=5032.71,1932.68;EPPR=3.13803;GTI=10;LEN=1,6;MEANALT=4.15957,4.1828;MQM=38.3917,36.4656;MQMR=40;NS=94;NUMALT=2;ODDS=8930.84;PAIRED=0,0;PAIREDR=0;PAO=142.25,21;PQA=4904.5,732;PQR=4904.5;PRO=142.25;QA=805825,193189;QR=576;RO=17;RPL=29,0;RPP=55306.4,12111.1;RPPR=39.9253;RPR=25555,5576;RUN=1,1;SAF=8972,1675;SAP=4957.2,1932.68;SAR=16612,3901;SRF=8;SRP=3.13803;SRR=9;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:165:0,126,32:0:0:126,32:3963,1108:-383.516,-85.6724,-47.7426,-297.913,0,-288.28	1/2:242:0,178,36:0:0:178,36:5502,1223:-504.793,-92.8945,-39.3112,-411.961,0,-401.124	1/2:584:1,441,124:1:35:441,124:13338,4250:-1303.22,-326.82,-196.596,-974.197,0,-939.4	1/1:356:0,277,32:0:0:277,32:8630,1131:-731.984,-83.3853,0,-654.968,-6.37657,-645.335	1/1:142:0,121,17:0:0:121,17:3757,599:-315.579,-36.4246,0,-279.622,-0.530934,-274.505	1/1:122:0,105,6:0:0:105,6:3289,200:-280.047,-31.6082,0,-265.045,-16.576,-263.239	1/2:261:0,175,43:0:0:175,43:5466,1501:-510.151,-100.048,-47.3681,-410.098,0,-397.154	1/2:357:0,296,42:0:0:296,42:9007,1450:-774.453,-110.758,-21.653,-663.744,0,-651.101	1/2:261:0,216,26:0:0:216,26:6804,914:-581.989,-70.1504,-5.12788,-511.898,0,-504.072	1/2:240:0,145,68:0:0:145,68:4587,2372:-523.356,-176.07,-132.421,-347.285,0,-326.815	1/2:984:1,715,147:1:31:715,147:23431,5084:-2154.09,-338.915,-125.849,-1813.31,0,-1771.23	1/2:480:0,370,73:0:0:370,73:11815,2501:-1081.22,-186.031,-74.6501,-895.242,0,-873.267	1/2:673:1,446,185:1:36:446,185:13462,6434:-1474.32,-486.151,-354.812,-985.625,0,-932.854	1/2:658:0,439,136:0:0:439,136:12833,4728:-1238.74,-305.955,-173.803,-932.794,0,-891.854	1/2:656:0,378,140:0:0:378,140:11596,4872:-1192.48,-333.683,-219.894,-858.796,0,-816.652	1/2:364:1,248,71:1:34:248,71:7649,2456:-723.811,-149.932,-78.0352,-571.429,0,-552.814	1/2:446:0,344,67:0:0:344,67:10339,2289:-929.335,-169.462,-65.9073,-759.927,0,-739.758	1/2:246:0,197,33:0:0:197,33:5901,1160:-518.892,-87.1764,-27.8735,-431.782,0,-421.848	1/2:338:0,273,50:0:0:273,50:9217,1746:-855.265,-131.978,-49.7964,-723.367,0,-708.315	1/2:356:0,245,38:0:0:245,38:7697,1329:-668.436,-85.6782,-11.9259,-582.746,0,-571.307	1/2:314:0,232,47:0:0:232,47:7161,1645:-643.54,-111.311,-41.4718,-532.24,0,-518.092	1/1:174:0,165,3:0:0:165,3:5018,108:-420.806,-49.67,0,-415.049,-43.924,-414.146	1/2:241:0,180,25:0:0:180,25:5807,854:-503.245,-60.107,-5.92156,-443.129,0,-435.604	1/2:285:0,212,48:0:0:212,48:6347,1647:-575.906,-113.125,-49.3067,-462.773,0,-448.323	1/2:172:0,135,21:0:0:135,21:4273,700:-368.964,-48.0235,-7.38441,-320.94,0,-314.619	1/2:438:0,349,58:0:0:349,58:10450,2046:-908.384,-138.595,-33.5357,-769.814,0,-752.354	1/2:311:0,244,50:0:0:244,50:7327,1691:-651.125,-111.573,-38.1214,-539.551,0,-524.5	1/2:172:1,120,35:1:34:120,35:3678,1194:-353.486,-78.9848,-45.6149,-272.044,0,-264.261	1/1:585:1,515,39:1:33:515,39:15716,1376:-1312.06,-153.551,0,-1234.8,-77.4612,-1224.54	1/2:182:1,142,25:1:32:142,25:4327,883:-378.076,-56.3751,-15.3503,-320.303,0,-314.5	1/2:350:0,233,55:0:0:233,55:7313,1882:-672.718,-125.158,-55.0177,-547.544,0,-530.987	1/1:128:0,114,9:0:0:114,9:3937,322:-349.179,-34.3174,0,-328.982,-14.1165,-326.273	1/1:218:0,200,12:0:0:200,12:7062,414:-627.414,-60.206,0,-597.719,-30.496,-594.107	1/1:161:0,154,3:0:0:154,3:5386,106:-476.496,-46.3586,0,-468.411,-38.219,-467.508	1/1:391:0,387,1:0:0:387,1:13618,33:-1213.45,-116.499,0,-1210.8,-113.842,-1210.5	1/1:161:0,156,4:0:0:156,4:5449,132:-482.494,-46.9607,0,-472.371,-36.8089,-471.167	1/1:1243:1,1033,121:1:36:1033,121:31627,4262:-2648.74,-308.032,0,-2415.96,-77.8847,-2382.47	1/1:100:0,88,2:0:0:88,2:2674,68:-224.134,-26.4906,0,-218.669,-21.0197,-218.067	1/2:573:1,459,90:1:36:459,90:15466,3141:-1448.5,-235.185,-99.9499,-1210.77,0,-1186.61	1/1:145:3,140,1:3:95:140,1:4931,36:-431.415,-34.7209,0,-429.425,-39.2357,-436.522	1/2:745:0,509,155:0:0:509,155:15266,5387:-1500.22,-384.283,-231.058,-1115.93,0,-1069.27	1/2:360:0,256,72:0:0:256,72:7813,2479:-757.073,-173.207,-96.1433,-583.881,0,-562.207	1/2:372:0,305,45:0:0:305,45:9432,1507:-803.213,-95.8676,-4.05349,-707.358,0,-693.812	1/2:322:0,200,72:0:0:200,72:6346,2495:-649.045,-171.594,-111.388,-477.45,0,-455.776	1/2:526:1,314,112:1:32:314,112:9646,3836:-977.145,-259.568,-166.922,-715.989,0,-684.152	1/1:157:0,144,6:0:0:144,6:4444,201:-376.147,-43.3483,0,-364.258,-31.4622,-362.452	1/2:257:0,205,37:0:0:205,37:6430,1242:-572.51,-93.5613,-31.8501,-479.001,0,-467.862	1/2:548:0,388,88:0:0:388,88:11795,3058:-1071.88,-198.403,-81.6038,-873.453,0,-846.963	1/2:151:0,107,21:0:0:107,21:3364,706:-302.092,-47.5063,-15.2961,-254.581,0,-248.259	1/2:347:0,213,93:0:0:213,93:6688,3235:-741.119,-238.243,-174.124,-502.881,0,-474.885	1/1:235:0,208,7:0:0:208,7:6748,231:-577.132,-62.6142,0,-562.363,-47.8399,-560.256	1/1:224:0,217,5:0:0:217,5:7709,168:-689.604,-65.3235,0,-677.722,-53.4755,-676.217	1/2:198:0,139,48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chr08	29108830	.	T	A	8.47065e-12	PASS	AB=0.161066;ABP=16512.6;AC=40;AF=0.212766;AN=188;AO=4993;CIGAR=1X;DP=40644;DPB=40644;DPRA=0;EPP=10793.1;EPPR=3087.38;GTI=39;LEN=1;MEANALT=1.15957;MQM=24.273;MQMR=42.4132;NS=94;NUMALT=1;ODDS=84.1922;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=177417;QR=1273190;RO=35630;RPL=0;RPP=10845.2;RPPR=76092.4;RPR=4993;RUN=1;SAF=6;SAP=10793.1;SAR=4987;SRF=14406;SRP=2836.05;SRR=21224;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:209:175,34:175:6242:34:1216:-9.88496,0,-457.292	0/0:336:300,35:300:10717:35:1243:0,-26.2808,-791.82	0/1:793:663,130:663:23600:130:4643:-39.6643,0,-1701.43	0/1:385:311,74:311:11098:74:2651:-48.19,0,-804.008	0/1:164:133,31:133:4776:31:1108:-14.635,0,-334.738	0/1:141:115,26:115:4116:26:919:-13.2979,0,-289.659	0/1:284:232,52:232:8296:52:1846:-29.0109,0,-592.295	0/1:488:410,78:410:14639:78:2784:-19.7448,0,-1032.79	0/1:329:279,50:279:9960:50:1774:-7.755,0,-712.033	0/0:252:226,25:226:8052:25:896:0,-20.6993,-609.191	0/0:1038:940,96:940:33648:96:3397:0,-100.924,-2564.06	0/0:631:565,66:565:20162:66:2327:0,-48.5059,-1501.06	0/0:920:800,120:800:28512:120:4252:0,-20.5404,-2049.19	0/0:782:678,104:678:24175:104:3684:0,-22.4031,-1649.53	0/0:746:659,86:659:23612:86:3029:0,-35.7445,-1689.44	0/0:439:393,44:393:14014:44:1554:0,-41.4019,-1015.52	0/1:587:501,86:501:17865:86:3027:-6.2687,0,-1242.95	0/1:335:283,51:283:10109:51:1797:-8.14794,0,-707.771	0/0:387:354,31:354:12678:31:1112:0,-49.8039,-1006.49	0/0:390:338,52:338:12031:52:1849:0,-2.17387,-868.095	0/0:368:323,45:323:11563:45:1598:0,-18.3368,-829.337	0/1:217:184,33:184:6569:33:1160:-7.49793,0,-453.948	0/1:257:221,36:221:7866:36:1272:-2.18081,0,-581.647	0/1:326:272,54:272:9707:54:1927:-12.7413,0,-672.644	0/0:210:183,27:183:6521:27:972:0,-7.61198,-481.669	0/1:642:544,98:544:19387:98:3489:-23.181,0,-1383.21	0/0:350:303,47:303:10818:47:1655:0,-8.61784,-748.647	0/0:197:180,17:180:6415:17:604:0,-24.2629,-476.563	0/1:786:662,124:662:23674:124:4397:-37.489,0,-1649.47	0/1:211:173,38:173:6162:38:1346:-14.568,0,-427.34	0/1:376:320,56:320:11415:56:1996:-11.5767,0,-819.815	0/0:136:127,9:127:4564:9:320:0,-22.1946,-375.672	0/0:224:219,5:219:7847:5:180:0,-56.8608,-677.51	0/0:173:168,5:168:6031:5:176:0,-41.0409,-511.724	0/0:402:393,9:393:14059:9:324:0,-101.551,-1227.61	0/0:172:163,9:163:5856:9:324:0,-32.3142,-493.668	0/0:1842:1626,214:1626:58079:214:7608:0,-80.7981,-4173.38	0/1:119:100,19:100:3558:19:675:-3.51519,0,-255.101	0/0:633:587,46:587:21010:46:1632:0,-92.5902,-1682.26	0/0:145:139,6:139:4973:6:216:0,-30.6964,-430.641	0/1:821:674,147:674:24051:147:5234:-55.7723,0,-1683.52	0/0:404:356,47:356:12750:47:1669:0,-25.1167,-921.543	0/1:429:355,74:355:12719:74:2639:-23.5828,0,-894.218	0/0:358:323,35:323:11548:35:1244:0,-30.6305,-863.19	0/0:603:524,79:524:18723:79:2777:0,-7.73874,-1340.02	0/1:206:171,35:171:6132:35:1244:-15.777,0,-437.168	0/1:347:295,52:295:10515:52:1825:-5.93398,0,-754.891	0/1:591:483,107:483:17264:107:3779:-57.9587,0,-1192.52	0/1:173:148,25:148:5270:25:900:-3.50389,0,-382.663	0/0:356:315,41:315:11233:41:1463:0,-16.3503,-819.918	0/0:296:256,40:256:9123:40:1428:0,-0.342992,-670.624	0/0:226:223,3:223:8004:3:108:0,-61.1254,-704.824	0/0:260:232,28:232:8275:28:1000:0,-18.2847,-629.011	0/0:112:101,11:101:3602:11:396:0,-8.59698,-270.297	0/0:74:68,6:68:2440:6:212:0,-9.25589,-201.364	0/1:553:468,85:468:16710:85:3035:-8.87863,0,-1150.71	0/0:133:115,18:115:4120:18:644:0,-0.0380817,-301.811	0/0:187:182,5:182:6525:5:180:0,-44.9448,-571.922	0/0:172:170,2:170:6076:2:72:0,-47.09,-525.944	0/0:234:201,33:201:7160:33:1184:0,-2.30795,-531.854	0/0:837:744,92:744:26553:92:3267:0,-48.646,-1907.93	0/0:170:168,2:168:6036:2:72:0,-46.0739,-531.124	0/1:172:146,26:146:5210:26:936:-6.19512,0,-376.9	0/1:581:492,89:492:17595:89:3172:-21.8726,0,-1225.12	0/1:209:172,37:172:6143:37:1320:-13.1173,0,-424.269	0/1:287:225,62:225:8036:62:2216:-50.4863,0,-564.017	0/1:301:254,47:254:9062:47:1680:-13.5379,0,-657.315	0/0:479:419,60:419:14948:60:2156:0,-12.1314,-1064.78	0/0:810:770,38:770:27607:38:1347:0,-165.538,-2283.21	0/1:189:153,36:153:5472:36:1275:-20.4786,0,-393.441	0/0:413:362,50:362:12953:50:1763:0,-14.0925,-937.741	0/0:219:193,26:193:6881:26:931:0,-8.16934,-530.984	0/1:297:253,44:253:9037:44:1549:-4.6658,0,-644.292	0/0:380:335,45:335:11972:45:1604:0,-18.1603,-842.15	0/1:818:691,127:691:24703:127:4511:-14.7291,0,-1683.24	0/1:603:499,104:499:17888:104:3711:-48.6552,0,-1237.13	0/1:239:200,39:200:7160:39:1388:-12.2026,0,-518.649	0/0:284:258,26:258:9268:26:932:0,-29.7482,-673.081	0/0:287:281,6:281:10070:6:216:0,-73.3412,-883.322	0/1:287:237,50:237:8508:50:1766:-17.0909,0,-579.774	0/0:325:286,39:286:10220:39:1373:0,-14.0382,-753.734	0/1:1013:851,160:851:30422:160:5714:-48.2606,0,-2154.08	0/0:527:476,51:476:17024:51:1824:0,-45.8537,-1244.75	0/0:786:709,77:709:25355:77:2739:0,-66.9998,-1877.44	0/0:558:482,76:482:17191:76:2680:0,-1.02151,-1198.99	0/0:816:746,70:746:26662:70:2472:0,-91.837,-2020.11	0/1:98:84,14:84:3004:14:476:-0.118018,0,-207.927	0/0:365:323,41:323:11533:41:1442:0,-22.3955,-843.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chr08	29108841	.	A	G	127350	PASS	AB=0.367172;ABP=5900.85;AC=84;AF=0.446809;AN=188;AO=14273;CIGAR=1X;DP=40631;DPB=40631;DPRA=0;EPP=30996.4;EPPR=40966.3;GTI=5;LEN=1;MEANALT=1.06383;MQM=32.011;MQMR=44.5211;NS=94;NUMALT=1;ODDS=1.88537;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=504236;QR=940741;RO=26352;RPL=4;RPP=30961.7;RPPR=321.509;RPR=14269;RUN=1;SAF=4;SAP=30961.7;SAR=14269;SRF=14219;SRP=361.576;SRR=12133;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:206:122,83:122:4364:83:2954:-155.684,0,-302.068	0/1:334:232,102:232:8321:102:3551:-164.337,0,-569.023	0/1:795:447,348:447:15947:348:12356:-675.48,0,-1071.91	0/1:379:198,181:198:7094:181:6438:-367.957,0,-469.417	0/1:164:86,78:86:3064:78:2804:-152.065,0,-193.697	0/1:139:89,50:89:3157:50:1787:-84.6795,0,-212.749	0/1:286:161,125:161:5704:125:4363:-241.41,0,-373.815	0/1:490:288,202:288:10254:202:7125:-379.096,0,-666.694	0/1:329:207,122:207:7383:122:4352:-219.236,0,-499.376	0/1:250:164,86:164:5884:86:3052:-159.274,0,-410.544	0/1:1041:712,329:712:25360:329:11613:-568.771,0,-1783	0/1:627:414,213:414:14768:213:7503:-373.29,0,-1013.07	0/1:923:580,343:580:20633:343:12073:-617.316,0,-1390.26	0/1:792:512,280:512:18281:280:9893:-475.21,0,-1146.97	0/1:739:480,259:480:17137:259:9146:-471.376,0,-1124.29	0/1:435:308,127:308:11005:127:4440:-194.858,0,-734.253	0/1:588:332,256:332:11860:256:9056:-495.652,0,-753.467	0/1:332:202,130:202:7205:130:4598:-238.241,0,-467.15	0/1:381:293,88:293:10457:88:3122:-116.269,0,-778.108	0/1:383:264,119:264:9460:119:4223:-201.055,0,-651.637	0/1:372:232,140:232:8292:140:4902:-254.022,0,-543.078	0/1:218:129,89:129:4628:89:3124:-172.18,0,-291.386	0/1:258:157,101:157:5606:101:3584:-193.494,0,-392.367	0/1:330:172,158:172:6162:158:5599:-309.652,0,-383.861	0/1:213:125,88:125:4452:88:3122:-167.981,0,-303.956	0/1:642:436,206:436:15558:206:7345:-344.887,0,-1059.33	0/1:351:206,145:206:7369:145:5103:-273.06,0,-460.681	0/1:196:136,60:136:4842:60:2118:-98.7484,0,-326.709	0/1:789:418,370:418:14960:370:13063:-761.37,0,-918.019	0/1:209:137,72:137:4877:72:2565:-119.462,0,-321.851	0/1:380:213,167:213:7604:167:5938:-338.202,0,-501.697	0/1:134:114,20:114:4085:20:720:-10.6017,0,-315.412	0/0:225:206,19:206:7408:19:667:0,-16.1502,-599.639	0/0:171:153,18:153:5481:18:639:0,-0.515822,-427.41	0/0:404:380,24:380:13564:24:822:0,-61.6747,-1144.75	0/0:170:151,19:151:5394:19:675:0,-1.06439,-423.998	0/1:1837:1126,710:1126:40114:710:25033:-1377.79,0,-2606.79	0/1:120:70,50:70:2503:50:1770:-92.9892,0,-165.697	0/1:635:500,135:500:17847:135:4772:-162.105,0,-1331.69	0/0:144:134,10:134:4804:10:356:0,-17.5847,-402.727	0/1:821:433,388:433:15481:388:13648:-749.009,0,-984.704	0/1:395:265,130:265:9491:130:4604:-217.795,0,-633.42	0/1:432:268,164:268:9544:164:5816:-284.4,0,-632.418	0/1:365:239,126:239:8517:126:4451:-230.09,0,-579.663	0/1:589:368,221:368:13105:221:7783:-412.431,0,-879.325	0/1:205:129,76:129:4570:76:2683:-137.108,0,-308.221	0/1:345:189,156:189:6761:156:5523:-310.428,0,-445.578	0/1:591:305,286:305:10897:286:10092:-578.132,0,-667.528	0/1:168:112,56:112:4016:56:1982:-96.4562,0,-276.678	0/1:356:212,144:212:7567:144:5090:-286.994,0,-496.624	0/1:295:177,118:177:6325:118:4228:-235.439,0,-437.104	0/0:228:217,11:217:7717:11:381:0,-39.5865,-659.169	0/1:261:177,84:177:6328:84:2942:-143.243,0,-450.606	0/1:110:74,36:74:2628:36:1279:-67.6282,0,-180.531	0/1:75:61,14:61:2188:14:504:-15.1897,0,-171.25	0/1:566:319,247:319:11424:247:8611:-464.536,0,-717.74	0/1:135:73,62:73:2599:62:2194:-123.765,0,-178.511	0/0:184:176,8:176:6292:8:288:0,-34.8607,-542.339	0/0:171:161,10:161:5772:10:356:0,-24.1781,-478.619	0/1:237:144,93:144:5140:93:3304:-171.994,0,-363.429	0/1:832:524,307:524:18739:307:10915:-573.884,0,-1223.95	0/0:168:160,8:160:5726:8:284:0,-27.488,-486.955	0/1:176:101,75:101:3615:75:2652:-146.417,0,-242.923	0/1:584:345,239:345:12325:239:8487:-463.642,0,-787.987	0/1:210:120,90:120:4304:90:3185:-162.235,0,-274.311	0/1:290:133,157:133:4759:157:5500:-326.839,0,-290.127	0/1:298:174,124:174:6184:124:4393:-243.779,0,-417.938	0/1:486:306,180:306:10941:180:6356:-335.155,0,-720.129	0/1:793:672,121:672:24016:121:4288:-79.8385,0,-1831.02	0/1:193:121,72:121:4287:72:2541:-122.868,0,-294.932	0/1:417:259,158:259:9233:158:5577:-303.518,0,-611.994	0/1:224:151,73:151:5382:73:2583:-128.302,0,-396.263	0/1:296:164,132:164:5861:132:4679:-263.409,0,-383.043	0/1:383:244,139:244:8708:139:4924:-252.41,0,-556.288	0/1:817:495,322:495:17683:322:11350:-579.772,0,-1111.97	0/1:600:326,274:326:11666:274:9712:-547.426,0,-720.997	0/1:235:136,99:136:4853:99:3498:-187.725,0,-327.604	0/1:283:196,87:196:7009:87:3037:-143.454,0,-461.452	0/0:280:265,15:265:9474:15:540:0,-45.1294,-805.794	0/1:286:162,124:162:5816:124:4330:-226.213,0,-362.094	0/1:330:194,136:194:6929:136:4817:-263.113,0,-469.778	0/1:1017:526,490:526:18776:490:17257:-1013.24,0,-1185.99	0/1:534:360,174:360:12837:174:6148:-304.051,0,-855.597	0/1:792:526,265:526:18816:265:9338:-478.3,0,-1267.9	0/1:556:364,192:364:12980:192:6781:-338.931,0,-851.169	0/1:811:573,238:573:20389:238:8401:-398.224,0,-1418.82	0/1:98:64,34:64:2292:34:1220:-58.1758,0,-152.255	0/1:368:226,142:226:8080:142:4998:-261.026,0,-543.963	0/1:445:300,145:300:10685:145:5121:-259.149,0,-736.258	0/1:687:590,97:590:21059:97:3454:-51.6739,0,-1616.32	0/1:1132:886,246:886:31606:246:8687:-287.412,0,-2308.9	0/1:390:284,106:284:10085:106:3758:-173.009,0,-707.14	0/1:372:229,143:229:8171:143:5075:-261.35,0,-508.405	0/1:1308:791,517:791:28205:517:18225:-971.302,0,-1828.31
chr08	29108851	.	CTGAGATTACAGTG	CAGAGGTTAGAGTG,CAGAGATTACAGTG,TAGAGGTTAGAGTA	769066	PASS	AB=0.717868,0.147902,0.12416;ABP=14537.4,37963.9,43256.1;AC=115,69,4;AF=0.611702,0.367021,0.0212766;AN=188;AO=30768,5492,4741;CIGAR=1M1X3M1X3M1X4M,1M1X12M,2X3M1X3M1X3M1X;DP=41444;DPB=41443.4;DPRA=0,2.46026,3.02077;EPP=10579.9,3.36615,3.70695;EPPR=11.6962;GTI=10;LEN=14,1,14;MEANALT=7.06383,7.14286,7.07527;MQM=39.1702,57.9809,24.8129;MQMR=60;NS=94;NUMALT=3;ODDS=10415;PAIRED=0,0,0;PAIREDR=0;PAO=0,0,1;PQA=0,0,0;PQR=0;PRO=0;QA=977362,196394,165896;QR=114;RO=4;RPL=30733,5428,4741;RPP=66511.2,11379.3,10298;RPPR=11.6962;RPR=35,64,0;RUN=1,1,1;SAF=9228,2667,2351;SAP=10701.2,12.8808,3.70695;SAR=21540,2825,2390;SRF=0;SRP=11.6962;SRR=4;TYPE=complex,snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:212:0,161,34,17:0:0:161,34,17:5133,1184,594:-486.178,-95.692,-47.2262,-390.548,0,-380.313,-454.398,-63.9417,-358.769,-449.281	1/2:343:0,239,61,38:0:0:239,61,38:7505,2192,1326:-747.974,-177.178,-105.232,-570.849,0,-552.487,-678.037,-107.274,-500.913,-666.597	1/2:812:0,589,132,84:0:0:589,132,84:18604,4722,2938:-1787.92,-381.251,-203.945,-1406.73,0,-1366.99,-1632.28,-225.646,-1251.09,-1606.99	1/1:387:0,319,28,39:0:0:319,28,39:10162,1004,1377:-870.079,-96.0286,0,-788.186,-14.097,-779.758,-793.389,-19.3936,-711.496,-781.649	1/2:166:0,126,21,18:0:0:126,21,18:3858,748,633:-348.76,-61.0308,-23.101,-287.783,0,-281.461,-315.685,-27.9998,-254.708,-310.267	1/2:139:0,106,13,15:0:0:106,13,15:3289,468,525:-286.394,-38.2274,-6.31821,-248.201,0,-244.288,-258.505,-10.3787,-220.311,-253.989	1/1:294:0,246,19,23:0:0:246,19,23:7671,673,813:-654.128,-74.0534,0,-599.301,-19.192,-593.582,-608.546,-28.5058,-553.72,-601.623	1/2:495:0,345,67,79:0:0:345,67,79:10837,2393,2735:-1012.12,-195.152,-91.2962,-817.012,0,-796.843,-864.54,-47.6186,-669.429,-840.759	1/2:339:0,266,31,38:0:0:266,31,38:8399,1112,1335:-729.691,-90.7462,-10.6722,-638.984,0,-629.652,-657.613,-18.7182,-566.906,-646.173	1/2:258:0,176,52,28:0:0:176,52,28:5638,1868,986:-581.801,-151.295,-98.3133,-430.557,0,-414.904,-526.743,-96.2647,-375.499,-518.314	1/1:1065:0,878,78,97:0:0:878,78,97:28467,2783,3367:-2466.79,-264.304,0,-2239.91,-37.3844,-2216.43,-2283.51,-81.0711,-2056.63,-2254.31	1/2:643:0,493,70,73:0:0:493,70,73:15766,2492,2547:-1405.6,-203.145,-54.7369,-1202.5,0,-1181.42,-1267.84,-65.435,-1064.74,-1245.87	1/2:932:0,605,192,124:0:0:605,192,124:18989,6859,4331:-1983.42,-552.695,-370.572,-1430.78,0,-1372.98,-1749.42,-318.726,-1196.78,-1712.09	1/2:803:0,547,115,131:0:0:547,115,131:16488,4128,4589:-1556,-336.734,-172.071,-1219.31,0,-1184.69,-1318.11,-98.8956,-981.417,-1278.68	1/2:747:0,530,102,108:0:0:530,102,108:16581,3647,3812:-1546.97,-297.421,-137.875,-1249.59,0,-1218.88,-1334.64,-85.1315,-1037.26,-1302.13	1/2:446:0,332,56,51:0:0:332,56,51:10206,2007,1782:-933.551,-163.743,-63.8011,-769.855,0,-752.997,-840.204,-70.4398,-676.508,-824.852	1/2:600:0,450,65,82:0:0:450,65,82:14062,2336,2845:-1246.23,-190.625,-55.1611,-1055.65,0,-1036.08,-1096.34,-40.7897,-905.758,-1071.65	1/2:341:0,236,43,57:0:0:236,43,57:7404,1528,1988:-682.805,-124.558,-53.5154,-558.283,0,-545.339,-576.254,-18.0542,-451.732,-559.095	1/2:389:0,319,49,20:0:0:319,49,20:10515,1742,691:-959.14,-137.754,-41.7251,-821.457,0,-806.707,-922.607,-101.247,-784.925,-916.587	1/2:396:0,289,48,54:0:0:289,48,54:9218,1703,1890:-845.776,-138.795,-51.7973,-707.019,0,-692.57,-738.556,-31.6133,-599.8,-722.301	1/2:383:0,284,46,51:0:0:284,46,51:8880,1648,1775:-804.087,-134.458,-48.965,-669.676,0,-655.828,-710.289,-40.7112,-575.877,-694.936	1/3:221:0,147,18,56:0:0:147,18,56:4697,648,1958:-466.983,-110.035,-65.7836,-414.104,-57.1352,-408.685,-356.881,0,-304.001,-340.023	1/2:262:0,200,35,25:0:0:200,35,25:6484,1256,879:-600.999,-102.505,-42.2989,-498.542,0,-488.006,-550.143,-51.6816,-447.685,-542.617	1/2:337:0,236,50,47:0:0:236,50,47:7232,1774,1634:-680.139,-144.591,-73.5481,-535.592,0,-520.54,-593.802,-58.2988,-449.255,-579.654	1/2:210:0,168,26,16:0:0:168,26,16:5326,936,561:-479.558,-76.4499,-25.8768,-403.177,0,-395.35,-450.482,-47.4157,-374.101,-445.665	1/2:652:0,388,166,95:0:0:388,166,95:12012,5960,3294:-1385.12,-484.601,-367.801,-900.569,0,-850.598,-1203.7,-303.212,-719.149,-1175.1	1/3:357:0,267,27,57:0:0:267,27,57:8321,968,2015:-729.282,-103.641,-23.2664,-650.325,-24.6541,-642.197,-625.584,0,-546.627,-608.425	1/2:199:0,121,44,34:0:0:121,44,34:3803,1575,1197:-415.721,-128.478,-92.0534,-287.295,0,-274.05,-353.725,-66.5217,-225.299,-343.49	1/3:803:0,610,62,123:0:0:610,62,123:19358,2219,4333:-1689.83,-229.302,-45.6742,-1508.87,-48.3136,-1490.21,-1460.47,0,-1279.51,-1423.44	1/2:217:0,159,28,26:0:0:159,28,26:4844,1004,893:-444.533,-81.8129,-33.9491,-362.766,0,-354.337,-397.157,-34.477,-315.391,-389.331	1/2:390:0,281,63,40:0:0:281,63,40:8804,2264,1376:-847.817,-184.754,-100.165,-663.108,0,-644.143,-768.158,-105.126,-583.448,-756.117	1/1:138:0,125,8,5:0:0:125,8,5:4175,288,174:-368.397,-37.6288,0,-345.025,-14.1852,-342.617,-359.175,-28.4501,-335.804,-357.67	1/1:226:0,206,11,6:0:0:206,11,6:7122,39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chr08	30470951	.	G	A	300574	PASS	AB=0.474938;ABP=27.0649;AC=155;AF=0.824468;AN=188;AO=10861;CIGAR=1X;DP=13210;DPB=13210;DPRA=0;EPP=23587.4;EPPR=5092.94;GTI=0;LEN=1;MEANALT=1.05319;MQM=55.8882;MQMR=59.9125;NS=94;NUMALT=1;ODDS=6.67336;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=387976;QR=83184;RO=2344;RPL=5072;RPP=105.794;RPPR=35.7528;RPR=5789;RUN=1;SAF=5072;SAP=105.794;SAR=5789;SRF=1078;SRP=35.7528;SRR=1266;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:63:0,63:0:0:63:2251:-202.492,-18.9649,0	1/1:153:0,153:0:0:153:5488:-493.555,-46.0576,0	0/1:175:86,89:86:3075:89:3183:-232.871,0,-224.298	1/1:195:1,194:1:36:194:6938:-619.416,-55.1026,0	0/1:157:81,76:81:2853:76:2720:-196.689,0,-209.745	0/1:60:29,31:29:1032:31:1112:-81.9512,0,-75.1307	1/1:128:0,128:0:0:128:4559:-409.832,-38.5318,0	1/1:217:0,217:0:0:217:7788:-697.557,-65.3235,0	1/1:152:0,152:0:0:152:5398:-482.551,-45.7566,0	1/1:155:1,154:1:36:154:5540:-494.082,-43.0618,0	1/1:137:0,137:0:0:137:4878:-438.596,-41.2411,0	1/1:235:1,234:1:36:234:8313:-741.666,-67.1438,0	1/1:188:0,188:0:0:188:6700:-599.797,-56.5936,0	1/1:157:1,155:1:36:155:5515:-491.778,-43.722,0	1/1:173:0,173:0:0:173:6172:-554.243,-52.0782,0	1/1:170:0,170:0:0:170:6072:-544.114,-51.1751,0	1/1:132:0,132:0:0:132:4731:-424.288,-39.736,0	1/1:117:0,117:0:0:117:4204:-377.367,-35.2205,0	1/1:114:0,114:0:0:114:4062:-363.719,-34.3174,0	1/1:230:0,230:0:0:230:8260:-741.068,-69.2369,0	1/1:245:0,245:0:0:245:8749:-784.845,-73.7524,0	0/1:101:68,33:68:2425:33:1184:-76.4046,0,-188.098	1/1:140:0,139:0:0:139:4974:-446.721,-41.8432,0	0/1:166:78,88:78:2770:88:3149:-232.619,0,-199.568	1/1:102:0,102:0:0:102:3629:-325.143,-30.7051,0	0/1:281:165,116:165:5867:116:4147:-288.407,0,-443.536	0/1:349:194,155:194:6903:155:5519:-389.028,0,-516.26	1/1:94:0,94:0:0:94:3372:-302.55,-28.2968,0	1/1:281:1,280:1:36:280:9947:-889.47,-80.9912,0	1/1:123:4,119:4:135:119:4210:-365.865,-24.5442,0	0/1:129:60,69:60:2135:69:2474:-183.474,0,-153.585	0/1:9:3,6:3:104:6:216:-17.0719,0,-6.99354	1/1:11:0,11:0:0:11:396:-35.5909,-3.31133,0	0/1:11:4,7:4:136:7:237:-18.13,0,-9.26421	1/1:12:0,12:0:0:12:432:-39.1252,-3.61236,0	1/1:6:0,6:0:0:6:216:-19.749,-1.80618,0	1/1:385:0,385:0:0:385:13777:-1238.19,-115.897,0	0/1:145:72,73:72:2552:73:2612:-191.341,0,-186.235	0/1:148:69,79:69:2427:79:2817:-208.137,0,-174.132	1/1:4:0,4:0:0:4:140:-12.9285,-1.20412,0	0/1:133:60,73:60:2144:73:2624:-196.001,0,-153.191	0/1:69:31,38:31:1089:38:1360:-101.565,0,-77.5462	0/1:236:99,137:99:3499:137:4873:-366.017,0,-244.065	0/1:168:83,85:83:2950:85:3043:-222.956,0,-215.154	1/1:159:0,158:0:0:158:5672:-509.009,-47.5627,0	0/1:112:53,59:53:1881:59:2109:-155.964,0,-135.851	0/1:139:66,73:66:2338:73:2610:-192.477,0,-168.833	0/1:200:103,97:103:3654:97:3457:-250.277,0,-268.857	1/1:96:0,96:0:0:96:3422:-307.672,-28.8989,0	1/1:180:0,180:0:0:180:6418:-577.117,-54.1854,0	1/1:105:0,105:0:0:105:3731:-334.794,-31.6082,0	0/1:8:5,3:5:180:3:108:-7.66368,0,-14.1438	0/1:116:76,40:76:2705:40:1421:-92.2974,0,-208.772	0/1:45:18,27:18:644:27:957:-72.818,0,-44.7442	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:184:101,83:101:3580:83:2932:-208.088,0,-267.016	1/1:75:0,75:0:0:75:2688:-241.006,-22.5773,0	1/1:11:0,11:0:0:11:396:-35.9198,-3.31133,0	1/1:19:0,19:0:0:19:673:-60.8802,-5.71957,0	1/1:106:0,106:0:0:106:3766:-337.186,-31.9092,0	1/1:176:1,175:1:36:175:6273:-559.396,-49.383,0	1/1:6:0,6:0:0:6:216:-19.6969,-1.80618,0	0/1:179:99,80:99:3539:80:2868:-204.079,0,-264.802	1/1:216:1,215:1:36:215:7713:-689.039,-61.4242,0	1/1:86:0,86:0:0:86:3075:-276.491,-25.8886,0	1/1:114:0,114:0:0:114:4075:-366.504,-34.3174,0	1/1:223:6,217:6:212:217:7764:-678.045,-47.7049,0	0/1:143:93,50:93:3328:50:1783:-117.475,0,-256.673	1/1:83:0,83:0:0:83:2975:-267.085,-24.9855,0	1/1:107:1,106:1:36:106:3790:-335.491,-28.6119,0	1/1:160:0,160:0:0:160:5727:-514.464,-48.1648,0	1/1:14:0,14:0:0:14:504:-45.54,-4.21442,0	1/1:131:0,131:0:0:131:4674:-417.322,-39.4349,0	0/1:115:71,44:71:2503:44:1580:-107.292,0,-190.9	1/1:216:0,215:0:0:215:7663:-687.188,-64.7215,0	1/1:188:1,187:1:36:187:6655:-594.454,-52.9954,0	1/1:174:0,173:0:0:173:6172:-552.63,-52.0782,0	1/1:169:3,166:3:108:166:5953:-521.227,-40.7989,0	0/1:11:8,3:8:288:3:108:-6.55877,0,-22.9561	1/1:166:1,165:1:36:165:5915:-527.511,-46.3727,0	0/1:137:74,63:74:2629:63:2243:-160.071,0,-195.615	1/1:277:1,276:1:36:276:9825:-878.673,-79.787,0	1/1:128:0,128:0:0:128:4583:-412.215,-38.5318,0	1/1:172:0,172:0:0:172:6139:-550.934,-51.7772,0	1/1:187:0,187:0:0:187:6700:-601.483,-56.2926,0	1/1:288:2,286:2:72:286:10242:-913.47,-79.8599,0	1/1:60:0,60:0:0:60:2148:-192.916,-18.0618,0	0/1:142:70,72:70:2487:72:2547:-185.756,0,-181.331	1/1:170:0,170:0:0:170:6078:-545.04,-51.1751,0	0/1:119:49,70:49:1718:70:2492:-187.521,0,-119.079	0/1:240:119,121:119:4143:121:4316:-314.284,0,-300.81	0/1:177:124,53:124:4435:53:1904:-116.978,0,-345.907	1/1:137:0,137:0:0:137:4905:-440.731,-41.2411,0	1/1:283:3,280:3:104:280:9994:-886.778,-75.4887,0
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chr08	30564371	.	CGC	TGC	176993	PASS	AB=0.502805;ABP=3.22961;AC=160;AF=0.851064;AN=188;AO=8099;CIGAR=1X2M;DP=9778;DPB=9778;DPRA=0;EPP=17589.8;EPPR=3499.09;GTI=1;LEN=1;MEANALT=1.55319;MQM=59.9804;MQMR=59.9827;NS=94;NUMALT=1;ODDS=0.893281;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=289894;QR=57046;RO=1614;RPL=0;RPP=17589.8;RPPR=3507.77;RPR=8099;RUN=1;SAF=8099;SAP=17589.8;SAR=0;SRF=1613;SRP=3499.09;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:23:0,23:0:0:23:816:-73.7617,-6.92369,0	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	0/1:78:57,21:57:1981:21:752:-44.5259,0,-155.082	1/1:168:0,167:0:0:167:6004:-540.152,-50.272,0	0/1:62:11,51:11:396:51:1817:-145.146,0,-17.3189	0/1:51:28,23:28:992:23:824:-59.1308,0,-74.2414	1/1:101:0,100:0:0:100:3588:-322.766,-30.103,0	1/1:203:0,202:0:0:202:7212:-648.775,-60.8081,0	1/1:55:0,55:0:0:55:1968:-177.395,-16.5567,0	1/1:127:2,123:2:61:123:4390:-389.449,-32.1672,0	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	1/1:69:0,68:0:0:68:2428:-218.416,-20.47,0	1/1:50:0,48:0:0:48:1700:-152.924,-14.4494,0	1/1:69:0,69:0:0:69:2463:-221.924,-20.7711,0	1/1:51:0,51:0:0:51:1806:-162.818,-15.3525,0	1/1:73:0,73:0:0:73:2607:-234.87,-21.9752,0	1/1:56:0,56:0:0:56:2002:-180.453,-16.8577,0	1/1:60:1,59:1:36:59:2120:-187.47,-14.4635,0	1/1:118:0,117:0:0:117:4190:-376.921,-35.2205,0	1/1:203:0,203:0:0:203:7280:-655.25,-61.1091,0	1/1:138:0,135:0:0:135:4801:-431.884,-40.6391,0	0/1:96:65,31:65:2255:31:1112:-71.4925,0,-174.309	1/1:56:0,56:0:0:56:2008:-180.993,-16.8577,0	0/1:84:27,57:27:970:57:2052:-159.665,0,-62.3312	1/1:27:0,27:0:0:27:972:-87.7979,-8.12781,0	0/1:298:190,104:190:6710:104:3690:-243.438,0,-514.631	0/1:207:103,104:103:3651:104:3721:-272.776,0,-266.481	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:209:0,208:0:0:208:7445:-669.753,-62.6142,0	1/1:53:2,50:2:72:50:1796:-155.086,-9.17667,0	0/1:70:29,40:29:1026:40:1440:-108.767,0,-71.5206	1/1:252:6,243:6:216:243:8667:-760.229,-55.5214,0	1/1:237:0,237:0:0:237:8434:-759.065,-71.3441,0	1/1:101:3,98:3:108:98:3512:-306.215,-20.3289,0	1/1:29:0,28:0:0:28:1008:-90.7247,-8.42884,0	1/1:279:0,275:0:0:275:9854:-886.419,-82.7833,0	1/1:207:0,206:0:0:206:7372:-663.166,-62.0122,0	0/1:191:131,57:131:4646:57:2034:-126.377,0,-361.352	0/1:190:24,166:24:862:166:5965:-479.758,0,-20.7066	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:102:46,56:46:1637:56:2012:-150.648,0,-116.913	0/1:42:17,25:17:612:25:900:-68.6778,0,-42.7702	1/1:102:0,101:0:0:101:3624:-326.074,-30.404,0	1/1:69:0,68:0:0:68:2440:-219.604,-20.47,0	1/1:65:0,64:0:0:64:2300:-207.048,-19.2659,0	0/1:90:57,33:57:2015:33:1184:-79.7756,0,-154.529	0/1:146:52,94:52:1833:94:3350:-257.764,0,-121.3	0/1:241:96,143:96:3434:143:5136:-390.148,0,-237.042	1/1:83:0,81:0:0:81:2897:-260.604,-24.3834,0	1/1:188:1,186:1:36:186:6673:-597.046,-53.0542,0	1/1:124:0,123:0:0:123:4404:-396.192,-37.0267,0	0/1:33:6,27:6:216:27:953:-76.1493,0,-9.85652	0/1:137:56,81:56:1997:81:2897:-219.723,0,-138.763	0/1:28:15,12:15:538:12:432:-30.7336,0,-40.2682	0/1:33:7,26:7:252:26:928:-73.9043,0,-13.095	0/1:160:97,63:97:3434:63:2268:-156.217,0,-261.11	1/1:24:0,24:0:0:24:860:-77.7218,-7.22472,0	1/1:175:0,174:0:0:174:6240:-561.333,-52.3792,0	1/1:19:0,18:0:0:18:648:-58.2921,-5.41854,0	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	1/1:110:0,108:0:0:108:3868:-347.999,-32.5112,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:272:188,84:188:6626:84:3006:-188.891,0,-514.544	1/1:81:0,80:0:0:80:2856:-256.91,-24.0824,0	1/1:73:0,73:0:0:73:2587:-232.807,-21.9752,0	1/1:110:0,110:0:0:110:3948:-355.509,-33.1133,0	1/1:122:0,120:0:0:120:4299:-386.726,-36.1236,0	0/1:37:26,11:26:912:11:384:-23.7566,0,-71.2573	1/1:90:0,90:0:0:90:3221:-290.111,-27.0927,0	1/1:54:0,51:0:0:51:1836:-165.192,-15.3525,0	1/1:67:0,67:0:0:67:2412:-217.178,-20.169,0	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:79:1,77:1:36:77:2748:-244.009,-20.1964,0	0/1:46:27,18:27:950:18:648:-44.7457,0,-71.9082	1/1:81:0,80:0:0:80:2868:-257.997,-24.0824,0	1/1:290:0,289:0:0:289:10356:-931.556,-86.9977,0	1/1:53:0,53:0:0:53:1896:-170.918,-15.9546,0	1/1:146:1,143:1:36:143:5122:-457.334,-40.1099,0	1/1:300:14,285:14:480:285:10167:-871.434,-46.842,0	1/1:152:0,151:0:0:151:5432:-488.646,-45.4555,0	0/1:135:76,59:76:2679:59:2116:-150.07,0,-200.716	1/1:75:0,75:0:0:75:2688:-242.165,-22.5773,0	1/1:72:0,72:0:0:72:2588:-233.168,-21.6742,0	1/1:52:0,52:0:0:52:1864:-168.039,-15.6536,0	1/1:123:0,123:0:0:123:4399:-396.081,-37.0267,0	1/1:128:0,127:0:0:127:4545:-408.856,-38.2308,0	1/1:46:0,44:0:0:44:1584:-142.492,-13.2453,0	0/1:102:54,48:54:1916:48:1716:-124.021,0,-142.012	1/1:59:0,59:0:0:59:2103:-189.539,-17.7608,0	0/1:42:16,26:16:563:26:936:-71.9162,0,-38.356	0/1:166:30,136:30:1053:136:4883:-389.649,0,-45.1088	0/1:69:52,17:52:1809:17:612:-34.6424,0,-142.316	1/1:83:0,83:0:0:83:2950:-265.731,-24.9855,0	1/1:73:0,70:0:0:70:2508:-225.654,-21.0721,0
chr08	30564511	.	C	T	22968.2	PASS	AB=0.525097;ABP=17.1794;AC=31;AF=0.164894;AN=188;AO=1373;CIGAR=1X;DP=7574;DPB=7574;DPRA=1.24022;EPP=2975.76;EPPR=13437.9;GTI=0;LEN=1;MEANALT=1;MQM=59.9782;MQMR=59.9971;NS=94;NUMALT=1;ODDS=0.703229;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48730;QR=221488;RO=6199;RPL=1373;RPP=2984.44;RPPR=13464;RPR=0;RUN=1;SAF=1;SAP=2975.76;SAR=1372;SRF=3;SRP=13437.9;SRR=6196;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:59:59,0:59:2082:0:0:0,-17.7608,-187.647	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.311	0/1:97:30,67:30:1076:67:2336:-181.294,0,-67.9529	0/0:142:142,0:142:5100:0:0:0,-42.7463,-459.141	0/1:46:23,23:23:820:23:809:-59.1743,0,-60.2751	0/1:38:24,14:24:856:14:485:-32.5378,0,-65.922	0/0:121:121,0:121:4305:0:0:0,-36.4246,-387.628	0/0:73:73,0:73:2619:0:0:0,-21.9752,-235.957	0/0:95:94,1:94:3361:1:36:0,-24.9996,-299.107	0/0:90:90,0:90:3236:0:0:0,-27.0927,-291.461	0/0:81:81,0:81:2870:0:0:0,-24.3834,-258.535	0/0:83:83,0:83:2980:0:0:0,-24.9855,-268.432	0/0:62:62,0:62:2219:0:0:0,-18.6639,-199.974	0/0:80:80,0:80:2876:0:0:0,-24.0824,-259.076	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.332	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.716	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/0:41:41,0:41:1476:0:0:0,-12.3422,-133.136	0/0:47:47,0:47:1669:0:0:0,-14.1484,-150.495	0/0:191:190,1:190:6778:1:36:0,-53.8985,-606.494	0/0:130:130,0:130:4657:0:0:0,-39.1339,-419.29	0/1:118:51,67:51:1809:67:2365:-177.586,0,-127.568	0/0:141:141,0:141:5026:0:0:0,-42.4452,-452.485	0/1:56:29,27:29:1040:27:949:-68.8645,0,-77.0567	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.503	0/1:161:70,91:70:2504:91:3225:-242.007,0,-177.147	0/1:225:101,124:101:3628:124:4436:-331.68,0,-258.992	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/0:172:172,0:172:6112:0:0:0,-51.7772,-550.179	0/0:238:230,8:230:8226:8:280:0,-46.1058,-714.81	0/1:78:39,39:39:1400:39:1385:-101.467,0,-102.819	0/1:4:1,3:1:32:3:108:-8.87105,0,-1.99519	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:19:19,0:19:665:0:0:0,-5.71957,-60.1728	0/0:162:162,0:162:5816:0:0:0,-48.7669,-523.551	0/1:95:64,31:64:2292:31:1108:-71.4331,0,-177.944	0/1:82:40,42:40:1436:42:1496:-110.25,0,-104.853	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:97:45,52:45:1593:52:1841:-136.768,0,-114.458	0/1:51:15,36:15:536:36:1284:-100.511,0,-33.2223	0/0:98:98,0:98:3494:0:0:0,-29.5009,-314.668	0/0:55:55,0:55:1957:0:0:0,-16.5566,-176.404	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/1:87:47,40:47:1684:40:1420:-101.908,0,-125.657	0/1:56:34,22:34:1224:22:776:-53.3045,0,-93.6094	0/1:116:76,40:76:2720:40:1432:-94.2581,0,-210.124	0/0:77:76,1:76:2728:1:36:0,-19.581,-242.164	0/0:80:80,0:80:2868:0:0:0,-24.0824,-258.357	0/0:110:110,0:110:3921:0:0:0,-33.1133,-353.083	0/1:10:9,1:9:324:1:32:-0.189013,0,-26.4956	0/1:88:57,31:57:2021:31:1103:-73.09,0,-155.671	0/1:103:57,46:57:2048:46:1621:-115.171,0,-153.585	0/1:20:8,12:8:288:12:432:-33.2006,0,-20.2468	0/1:92:55,37:55:1976:37:1294:-89.0622,0,-150.42	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:13:13,0:13:453:0:0:0,-3.91339,-41.0996	0/0:101:101,0:101:3590:0:0:0,-30.404,-323.305	0/0:134:134,0:134:4787:0:0:0,-40.338,-430.987	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:134:39,95:39:1366:95:3354:-261.743,0,-82.8964	0/0:84:83,1:83:2961:1:36:0,-21.6882,-263.124	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/0:43:43,0:43:1525:0:0:0,-12.9443,-137.541	0/0:69:68,0:68:2410:0:0:0,-20.47,-216.833	0/1:130:51,79:51:1828:79:2824:-215.265,0,-125.667	0/0:88:88,0:88:3164:0:0:0,-26.4906,-284.984	0/0:47:47,0:47:1643:0:0:0,-14.1484,-148.152	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/0:92:92,0:92:3296:0:0:0,-27.6948,-296.859	0/1:63:35,28:35:1252:28:993:-70.7176,0,-94.0202	0/0:202:201,0:201:7205:0:0:0,-60.507,-648.142	0/0:152:152,0:152:5452:0:0:0,-45.7566,-490.807	0/0:71:71,0:71:2536:0:0:0,-21.3731,-228.491	0/0:69:69,0:69:2453:0:0:0,-20.7711,-221.023	0/1:14:8,6:8:288:6:212:-15.2104,0,-22.053	0/0:62:62,0:62:2213:0:0:0,-18.6639,-199.433	0/1:68:33,35:33:1158:35:1214:-89.0891,0,-84.0525	0/0:195:195,0:195:6897:0:0:0,-58.7008,-620.8	0/0:61:61,0:61:2181:0:0:0,-18.3628,-196.554	0/0:56:56,0:56:1997:0:0:0,-16.8577,-180.002	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/0:103:102,1:102:3621:1:36:0,-27.4078,-322.483	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:76:39,37:39:1385:37:1320:-96.2237,0,-102.069	0/0:65:65,0:65:2332:0:0:0,-19.5669,-210.14	0/1:64:35,29:35:1260:29:1044:-75.0089,0,-94.4396	0/1:176:83,93:83:2980:93:3308:-244.957,0,-215.451	0/1:140:30,110:30:1065:110:3956:-314.085,0,-54.0156	0/0:71:71,0:71:2517:0:0:0,-21.3731,-226.781	0/0:84:84,0:84:3009:0:0:0,-25.2865,-271.039
chr08	30588520	.	T	G	175964	PASS	AB=0.518023;ABP=11.2288;AC=157;AF=0.835106;AN=188;AO=7927;CIGAR=1X;DP=9349;DPB=9349;DPRA=0;EPP=16870.6;EPPR=2974.62;GTI=2;LEN=1;MEANALT=1.02128;MQM=59.915;MQMR=59.9479;NS=94;NUMALT=1;ODDS=1.26086;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=283289;QR=50860;RO=1420;RPL=40;RPP=16870.6;RPPR=2974.62;RPR=7887;RUN=1;SAF=7927;SAP=17216.3;SAR=0;SRF=1420;SRP=3086.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:36:0,36:0:0:36:1268:-114.421,-10.8371,0	1/1:96:0,96:0:0:96:3440:-309.813,-28.8989,0	0/1:111:55,56:55:1967:56:2006:-147.399,0,-143.89	1/1:236:0,236:0:0:236:8430:-758.696,-71.0431,0	0/1:20:10,10:10:360:10:360:-26.7237,0,-26.7237	0/1:40:12,28:12:432:28:1004:-78.6347,0,-27.1791	1/1:119:0,119:0:0:119:4268:-384.269,-35.8226,0	1/1:151:1,150:1:36:150:5328:-476.054,-41.8573,0	1/1:155:0,155:0:0:155:5548:-499.445,-46.6597,0	1/1:118:0,118:0:0:118:4202:-378.36,-35.5215,0	1/1:79:0,79:0:0:79:2840:-255.838,-23.7814,0	1/1:145:0,145:0:0:145:5185:-466.789,-43.6494,0	1/1:102:1,101:1:36:101:3604:-320.967,-27.1068,0	1/1:95:0,95:0:0:95:3412:-307.293,-28.5979,0	1/1:78:0,78:0:0:78:2804:-252.571,-23.4803,0	1/1:78:0,78:0:0:78:2791:-251.43,-23.4803,0	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0	1/1:51:0,51:0:0:51:1832:-165.161,-15.3525,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:138:0,138:0:0:138:4938:-444.565,-41.5421,0	1/1:196:0,196:0:0:196:7007:-630.691,-59.0019,0	0/1:61:44,17:44:1571:17:608:-36.682,0,-123.313	1/1:108:1,106:1:36:106:3799:-338.528,-28.9518,0	0/1:61:16,45:16:576:45:1596:-125.56,0,-33.8122	1/1:106:0,106:0:0:106:3798:-342.015,-31.9092,0	0/1:285:136,149:136:4879:149:5331:-394.121,0,-353.438	0/1:189:98,91:98:3520:91:3272:-237.804,0,-260.114	1/1:47:0,47:0:0:47:1688:-152.207,-14.1484,0	1/1:252:0,252:0:0:252:8979:-808.033,-75.8596,0	1/1:148:7,141:7:248:141:5034:-430.509,-21.8882,0	0/1:210:90,120:90:3224:120:4281:-322.251,0,-227.166	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	0/1:5:2,3:2:72:3:93:-7.1691,0,-5.33157	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:206:0,206:0:0:206:7366:-662.98,-62.0122,0	0/1:110:52,58:52:1864:58:2041:-150.845,0,-134.926	0/1:41:22,19:22:792:19:684:-49.5481,0,-59.2634	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:165:75,90:75:2691:90:3206:-239.091,0,-192.764	0/1:22:11,11:11:396:11:388:-28.6347,0,-29.3601	1/1:145:0,145:0:0:145:5160:-463.817,-43.6494,0	1/1:81:0,81:0:0:81:2908:-261.955,-24.3834,0	1/1:95:0,95:0:0:95:3379:-303.834,-28.5979,0	0/1:96:31,65:31:1112:65:2323:-180.431,0,-71.4549	0/1:136:60,76:60:2148:76:2735:-205.452,0,-152.647	0/1:151:87,64:87:3115:64:2296:-161.425,0,-235.12	1/1:120:0,120:0:0:120:4299:-387.083,-36.1236,0	1/1:149:0,149:0:0:149:5336:-480.37,-44.8535,0	1/1:52:0,52:0:0:52:1872:-168.759,-15.6536,0	0/1:13:2,11:2:72:11:396:-32.0694,0,-2.92333	0/1:130:72,58:72:2571:58:2084:-148.696,0,-192.505	0/1:64:40,24:40:1424:24:845:-57.1012,0,-109.192	0/1:11:2,9:2:72:9:324:-26.1945,0,-3.52539	0/1:92:34,58:34:1220:58:2065:-158.424,0,-82.3896	1/1:41:0,41:0:0:41:1458:-131.498,-12.3422,0	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:104:0,104:0:0:104:3724:-335.361,-31.3071,0	1/1:116:0,116:0:0:116:4143:-373.052,-34.9195,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:161:60,100:60:2152:100:3571:-273.221,0,-145.57	1/1:165:0,165:0:0:165:5920:-532.907,-49.67,0	1/1:78:0,78:0:0:78:2766:-249.173,-23.4803,0	1/1:110:0,110:0:0:110:3869:-348.36,-33.1133,0	1/1:203:1,202:1:36:202:7206:-644.941,-57.5108,0	0/1:121:80,41:80:2863:41:1456:-94.9092,0,-221.482	1/1:51:0,51:0:0:51:1827:-164.71,-15.3525,0	1/1:85:0,85:0:0:85:3039:-273.731,-25.5876,0	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	1/1:26:0,26:0:0:26:921:-83.2052,-7.82678,0	1/1:132:0,132:0:0:132:4728:-425.661,-39.736,0	0/1:97:45,52:45:1607:52:1848:-137.398,0,-115.719	1/1:173:0,173:0:0:173:6171:-555.476,-52.0782,0	1/1:193:2,191:2:72:191:6839:-608.706,-51.2621,0	1/1:59:2,57:2:72:57:2033:-176.382,-10.924,0	1/1:118:1,117:1:36:117:4182:-372.934,-31.9233,0	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	1/1:120:0,120:0:0:120:4278:-385.168,-36.1236,0	0/1:152:56,96:56:1993:96:3452:-265.135,0,-133.886	1/1:310:1,309:1:36:309:11043:-990.163,-89.721,0	1/1:83:0,83:0:0:83:2975:-267.971,-24.9855,0	1/1:71:0,71:0:0:71:2552:-229.902,-21.3731,0	1/1:76:0,76:0:0:76:2720:-245.043,-22.8783,0	1/1:148:0,148:0:0:148:5293:-476.503,-44.5524,0	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	0/1:80:41,39:41:1460:39:1387:-101.046,0,-107.614	1/1:89:0,89:0:0:89:3192:-287.503,-26.7917,0	0/1:58:35,23:35:1260:23:828:-57.3844,0,-96.2457	0/1:112:52,60:52:1855:60:2132:-158.381,0,-133.514	0/1:103:73,30:73:2624:30:1058:-64.5113,0,-205.393	1/1:169:0,169:0:0:169:6021:-541.928,-50.8741,0	1/1:130:0,130:0:0:130:4660:-419.559,-39.1339,0
chr08	30588546	.	T	C	21479.7	PASS	AB=0.415307;ABP=213.034;AC=31;AF=0.164894;AN=188;AO=1416;CIGAR=1X;DP=10425;DPB=10425;DPRA=1.02012;EPP=3077.82;EPPR=19563.6;GTI=3;LEN=1;MEANALT=1;MQM=59.9442;MQMR=56.579;NS=94;NUMALT=1;ODDS=1.97696;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=50315;QR=321023;RO=9008;RPL=1416;RPP=3077.82;RPPR=10888.9;RPR=0;RUN=1;SAF=1416;SAP=3077.82;SAR=0;SRF=7864;SRP=10888.9;SRR=1144;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/0:93:93,0:93:3318:0:0:0,-27.9958,-298.838	0/1:114:57,57:57:2028:57:2036:-149.195,0,-148.475	0/0:235:235,0:235:8390:0:0:0,-70.742,-755.099	0/1:20:10,10:10:356:10:356:-26.3606,0,-26.3606	0/1:39:25,14:25:896:14:491:-32.7806,0,-69.2202	0/0:116:116,0:116:4085:0:0:0,-34.9195,-367.807	0/0:148:148,0:148:5207:0:0:0,-44.5524,-468.771	0/0:155:155,0:155:5518:0:0:0,-46.6596,-496.748	0/0:114:114,0:114:4065:0:0:0,-34.3174,-366.036	0/0:78:78,0:78:2786:0:0:0,-23.4803,-250.98	0/0:141:141,0:141:5027:0:0:0,-42.4452,-452.578	0/0:102:102,0:102:3668:0:0:0,-30.7051,-330.322	0/0:95:95,0:95:3360:0:0:0,-28.5978,-302.617	0/0:80:80,0:80:2849:0:0:0,-24.0824,-256.619	0/0:79:79,0:79:2812:0:0:0,-23.7814,-253.318	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.701	0/0:51:50,0:50:1788:0:0:0,-15.0515,-160.843	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:139:138,1:138:4880:1:36:0,-38.2449,-435.699	0/0:194:194,0:194:6901:0:0:0,-58.3998,-621.153	0/1:85:42,43:42:1512:43:1502:-109.881,0,-99.9486	0/0:109:108,1:108:3857:1:36:0,-29.214,-343.726	0/1:60:45,15:45:1593:15:514:-28.522,0,-125.59	0/0:104:104,0:104:3702:0:0:0,-31.3071,-333.38	0/1:470:334,136:334:11950:136:4839:-294.151,0,-850.411	0/1:189:92,97:92:3269:97:3464:-255.078,0,-237.43	0/0:46:46,0:46:1643:0:0:0,-13.8474,-148.158	0/0:620:620,0:620:22158:0:0:0,-186.639,-1847.15	0/0:147:141,6:141:5017:6:216:0,-24.4609,-431.844	0/1:211:121,90:121:4318:90:3199:-224.614,0,-325.278	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/0:32:32,0:32:1143:0:0:0,-9.63296,-103.179	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.4979	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:15:15,0:15:531:0:0:0,-4.51545,-48.1219	0/0:368:368,0:368:13131:0:0:0,-110.779,-1119.84	0/1:106:57,49:57:2027:49:1737:-124.703,0,-150.793	0/1:41:20,21:20:716:21:748:-55.3031,0,-52.4255	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:166:90,76:90:3228:76:2708:-193.994,0,-240.771	0/1:23:11,12:11:396:12:424:-31.5727,0,-29.0591	0/0:143:143,0:143:5095:0:0:0,-43.0473,-457.208	0/0:81:81,0:81:2869:0:0:0,-24.3834,-258.445	0/0:95:95,0:95:3395:0:0:0,-28.5978,-305.765	0/1:139:108,31:108:3842:31:1108:-58.1364,0,-289.133	0/1:136:77,59:77:2760:59:2120:-150.128,0,-207.701	0/1:151:64,87:64:2281:87:3094:-233.231,0,-160.088	0/0:118:118,0:118:4197:0:0:0,-35.5215,-377.906	0/0:147:146,1:146:5213:1:36:0,-40.6531,-465.703	0/0:134:134,0:134:4783:0:0:0,-40.338,-400.923	0/1:13:11,2:11:387:2:68:-2.54432,0,-31.2525	0/1:127:57,70:57:2044:70:2480:-185.214,0,-146.001	0/1:132:91,41:91:3239:41:1446:-90.6959,0,-227.52	0/1:10:8,2:8:275:2:72:-3.82642,0,-22.0732	0/1:91:58,33:58:2067:33:1138:-75.3265,0,-158.907	0/0:40:40,0:40:1423:0:0:0,-12.0412,-128.355	0/0:26:26,0:26:924:0:0:0,-7.82678,-78.0718	0/0:19:18,1:18:648:1:36:0,-2.12129,-51.7068	0/0:104:104,0:104:3699:0:0:0,-31.3071,-333.114	0/0:114:114,0:114:4049:0:0:0,-34.3174,-364.596	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/1:309:247,62:247:8816:62:2215:-106.596,0,-643.708	0/0:160:160,0:160:5722:0:0:0,-48.1648,-514.727	0/0:78:78,0:78:2800:0:0:0,-23.4803,-252.24	0/0:112:112,0:112:3957:0:0:0,-33.7154,-356.253	0/0:202:202,0:202:7200:0:0:0,-60.8081,-648.047	0/1:118:41,77:41:1472:77:2768:-213.839,0,-97.2546	0/0:50:50,0:50:1770:0:0:0,-15.0515,-159.582	0/0:84:84,0:84:2975:0:0:0,-25.2865,-267.978	0/0:59:59,0:59:2116:0:0:0,-17.7608,-177.551	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/0:131:131,0:131:4675:0:0:0,-39.4349,-420.895	0/1:98:52,46:52:1846:46:1648:-119.108,0,-136.9	0/0:174:174,0:174:6204:0:0:0,-52.3792,-558.449	0/0:190:190,0:190:6795:0:0:0,-57.1957,-611.622	0/0:59:57,2:57:2035:2:72:0,-10.924,-176.58	0/0:118:117,1:117:4143:1:36:0,-31.9233,-369.428	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/0:117:117,0:117:4170:0:0:0,-35.2205,-375.483	0/1:154:96,58:96:3431:58:2055:-138.86,0,-262.645	0/0:308:306,2:306:10913:2:63:0,-86.7341,-976.087	0/0:81:81,0:81:2884:0:0:0,-24.3834,-259.789	0/0:70:69,1:69:2459:1:36:0,-17.4738,-217.938	0/0:74:74,0:74:2617:0:0:0,-22.2762,-235.775	0/0:150:150,0:150:5341:0:0:0,-45.1545,-480.454	0/0:26:26,0:26:927:0:0:0,-7.82678,-83.7474	0/1:78:38,40:38:1351:40:1395:-102.363,0,-98.4093	0/0:89:89,0:89:3144:0:0:0,-26.7917,-283.186	0/1:57:23,34:23:824:34:1209:-91.9554,0,-57.3246	0/1:111:58,53:58:2076:53:1887:-136.693,0,-153.692	0/1:102:29,73:29:1044:73:2595:-203.086,0,-63.4119	0/0:168:168,0:168:5989:0:0:0,-50.573,-536.996	0/0:128:128,0:128:4556:0:0:0,-38.5318,-410.204
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chr08	30897283	.	G	C	90970.9	PASS	AB=0.565598;ABP=259.409;AC=32;AF=0.170213;AN=188;AO=3896;CIGAR=1X;DP=19881;DPB=19881;DPRA=1.24501;EPP=8463.07;EPPR=34611.9;GTI=4;LEN=1;MEANALT=1.27273;MQM=59.9451;MQMR=59.9637;NS=94;NUMALT=1;ODDS=2.33354;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138528;QR=563133;RO=15938;RPL=1717;RPP=121.975;RPPR=417.404;RPR=2179;RUN=1;SAF=1717;SAP=121.975;SAR=2179;SRF=7097;SRP=417.404;SRR=8841;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:83:83,0:83:2955:0:0:0,-24.9855,-266.184	0/0:322:320,1:320:11307:1:36:0,-93.3922,-1012.98	0/1:347:159,188:159:5635:188:6720:-500.372,0,-402.816	0/0:412:412,0:412:14493:0:0:0,-124.024,-1304.13	0/1:112:45,67:45:1612:67:2360:-178.941,0,-111.655	0/1:135:66,69:66:2313:69:2471:-182.005,0,-167.789	0/0:185:185,0:185:6580:0:0:0,-55.6905,-592.282	0/0:261:260,0:260:9154:0:0:0,-78.2678,-823.292	0/0:230:229,1:229:8108:1:36:0,-65.6386,-726.146	0/0:221:221,0:221:7826:0:0:0,-66.5276,-704.374	0/0:171:171,0:171:6036:0:0:0,-51.4761,-543.349	0/0:218:218,0:218:7721:0:0:0,-65.6245,-694.933	0/0:166:166,0:166:5890:0:0:0,-49.971,-530.215	0/0:186:186,0:186:6563:0:0:0,-55.9916,-590.742	0/0:169:169,0:169:6021:0:0:0,-50.8741,-541.996	0/0:149:147,0:147:5251:0:0:0,-44.2514,-472.366	0/0:179:179,0:179:6336:0:0:0,-53.8844,-570.335	0/0:177:177,0:177:6274:0:0:0,-53.2823,-564.713	0/0:99:98,0:98:3471:0:0:0,-29.5009,-312.237	0/0:486:483,3:483:17087:3:108:0,-136.225,-1527.41	0/0:317:315,0:315:11020:0:0:0,-94.8244,-991.357	0/1:219:55,163:55:1932:163:5769:-453.382,0,-108.209	0/0:194:193,1:193:6812:1:36:0,-54.8015,-609.492	0/1:243:119,124:119:4194:124:4387:-321.855,0,-304.489	0/0:225:225,0:225:7930:0:0:0,-67.7317,-713.654	0/1:537:252,285:252:8891:285:10144:-751.218,0,-638.529	0/1:400:183,217:183:6453:217:7709:-573.426,0,-460.445	0/1:73:38,35:38:1339:35:1256:-91.3701,0,-98.8341	0/0:550:548,2:548:19370:2:72:0,-158.73,-1736.02	0/0:207:205,2:205:7269:2:72:0,-55.4765,-647.428	0/1:301:138,163:138:4904:163:5789:-430.514,0,-350.903	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/0:44:43,0:43:1527:0:0:0,-12.9443,-137.363	0/1:30:22,6:22:788:6:216:-11.0018,0,-62.4563	0/0:24:23,0:23:820:0:0:0,-6.92369,-73.8011	0/0:30:27,0:27:968:0:0:0,-8.12781,-87.0777	0/0:438:438,0:438:15530:0:0:0,-131.851,-1397.42	0/1:302:120,182:120:4205:182:6502:-494.354,0,-287.725	0/1:187:84,103:84:2973:103:3634:-270.973,0,-211.51	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:368:182,186:182:6415:186:6609:-484.111,0,-466.664	0/1:103:51,52:51:1799:52:1859:-136.578,0,-131.185	0/0:247:247,0:247:8640:0:0:0,-74.3544,-777.604	0/0:183:183,0:183:6499:0:0:0,-55.0885,-583.81	0/0:152:151,1:151:5354:1:21:0,-43.6566,-479.895	0/1:197:76,121:76:2680:121:4327:-330.295,0,-182.141	0/1:321:130,191:130:4592:191:6782:-513.824,0,-316.816	0/1:345:126,217:126:4450:217:7722:-591.417,0,-297.08	0/0:208:206,0:206:7177:0:0:0,-62.0122,-645.636	0/0:258:258,0:258:9169:0:0:0,-77.6657,-825.187	0/0:377:376,0:376:13329:0:0:0,-113.187,-1199.06	0/1:27:21,3:21:752:3:108:-2.49062,0,-60.4219	0/1:458:181,277:181:6430:277:9879:-751.146,0,-440.91	0/1:98:46,51:46:1644:51:1816:-134.194,0,-118.728	0/1:37:17,20:17:597:20:720:-53.9907,0,-42.918	0/1:313:133,180:133:4698:180:6369:-479.078,0,-328.761	0/0:146:142,0:142:5036:0:0:0,-42.7463,-453.027	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:20:20,0:20:683:0:0:0,-6.0206,-61.7851	0/0:211:211,0:211:7470:0:0:0,-63.5173,-672.349	0/0:289:289,0:289:10211:0:0:0,-86.9977,-918.931	0/0:13:11,0:11:392:0:0:0,-3.31133,-35.2777	0/1:283:119,164:119:4191:164:5847:-441.151,0,-292.181	0/0:304:303,1:303:10706:1:32:0,-88.3138,-960.261	0/0:176:176,0:176:6227:0:0:0,-52.9813,-560.528	0/0:200:199,0:199:7037:0:0:0,-59.905,-633.042	0/0:303:302,0:302:10641:0:0:0,-90.9111,-957.246	0/1:269:68,201:68:2384:201:7124:-560.241,0,-133.838	0/0:112:111,0:111:3941:0:0:0,-33.4143,-354.506	0/0:165:165,0:165:5862:0:0:0,-49.6699,-526.593	0/0:182:181,0:181:6351:0:0:0,-54.4864,-571.327	0/0:36:36,0:36:1265:0:0:0,-10.8371,-114.15	0/0:218:218,0:218:7725:0:0:0,-65.6245,-695.268	0/1:157:77,76:77:2738:76:2696:-196.466,0,-200.245	0/0:399:399,0:399:14059:0:0:0,-120.111,-1265.09	0/0:310:309,1:309:10863:1:36:0,-89.721,-973.989	0/0:148:147,1:147:5136:1:22:0,-42.3525,-460.189	0/0:221:219,0:219:7774:0:0:0,-65.9256,-699.25	0/1:18:11,6:11:387:6:216:-14.3132,0,-29.6893	0/0:266:265,1:265:9351:1:36:0,-76.4757,-837.962	0/1:256:103,153:103:3631:153:5426:-411.406,0,-249.924	0/0:365:362,1:362:12768:1:36:0,-106.035,-1145.36	0/0:208:208,0:208:7395:0:0:0,-62.6142,-665.517	0/0:171:171,0:171:6019:0:0:0,-51.4761,-541.822	0/0:231:231,0:231:8169:0:0:0,-69.5379,-735.231	0/0:304:303,0:303:10706:0:0:0,-91.2121,-963.1	0/0:125:125,0:125:4400:0:0:0,-37.6287,-396.167	0/1:184:89,95:89:3151:95:3373:-248.396,0,-228.425	0/0:204:204,0:204:7245:0:0:0,-61.4101,-652.109	0/1:126:66,58:66:2344:58:2067:-148.613,0,-173.53	0/1:216:111,104:111:3911:104:3696:-267.755,0,-286.735	0/1:186:66,120:66:2316:120:4284:-329.747,0,-152.705	0/0:224:224,0:224:7881:0:0:0,-67.4307,-709.31	0/0:278:278,0:278:9800:0:0:0,-83.6863,-881.958
chr08	31415147	.	C	T	335596	PASS	AB=0.505263;ABP=3.83317;AC=161;AF=0.856383;AN=188;AO=11954;CIGAR=1X;DP=13687;DPB=13687;DPRA=0;EPP=25917.4;EPPR=3740.13;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.9792;MQMR=59.9925;NS=94;NUMALT=1;ODDS=3.33086;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=426312;QR=61532;RO=1729;RPL=6434;RPP=154.762;RPPR=84.676;RPR=5520;RUN=1;SAF=6439;SAP=158.101;SAR=5515;SRF=994;SRP=87.2582;SRR=735;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:96:0,96:0:0:96:3407:-306.846,-28.8989,0	1/1:150:1,149:1:32:149:5319:-475.646,-41.9552,0	0/1:150:61,89:61:2160:89:3168:-240.183,0,-149.51	1/1:228:0,228:0:0:228:8044:-723.978,-68.6348,0	1/1:91:2,89:2:72:89:3192:-280.666,-20.557,0	1/1:45:0,45:0:0:45:1597:-144.019,-13.5464,0	1/1:134:1,132:1:36:132:4706:-420.102,-36.7985,0	1/1:165:0,165:0:0:165:5876:-528.951,-49.67,0	1/1:223:0,223:0:0:223:7952:-715.703,-67.1297,0	1/1:135:0,135:0:0:135:4761:-428.646,-40.6391,0	1/1:155:0,155:0:0:155:5552:-499.802,-46.6597,0	1/1:234:0,234:0:0:234:8304:-747.373,-70.441,0	1/1:238:0,238:0:0:238:8496:-764.64,-71.6451,0	1/1:255:0,255:0:0:255:9033:-811.766,-76.7627,0	1/1:162:0,162:0:0:162:5760:-518.515,-48.7669,0	1/1:208:0,208:0:0:208:7428:-668.563,-62.6142,0	1/1:103:1,102:1:36:102:3656:-325.645,-27.4078,0	1/1:115:1,114:1:36:114:4056:-361.628,-31.0202,0	1/1:89:0,89:0:0:89:3178:-286.243,-26.7917,0	1/1:246:0,246:0:0:246:8797:-791.718,-74.0534,0	1/1:200:0,200:0:0:200:7152:-643.735,-60.206,0	0/1:55:38,17:38:1364:17:612:-38.8568,0,-106.504	1/1:184:0,184:0:0:184:6559:-590.393,-55.3895,0	0/1:158:64,94:64:2268:94:3376:-256.492,0,-156.818	1/1:90:1,89:1:36:89:3204:-284.983,-23.4944,0	0/1:272:118,154:118:4232:154:5520:-415.044,0,-299.179	1/1:203:0,203:0:0:203:7236:-651.296,-61.1091,0	0/1:73:37,36:37:1319:36:1260:-91.7247,0,-97.036	1/1:264:0,264:0:0:264:9454:-850.816,-79.4719,0	1/1:168:12,156:12:432:156:5590:-463.999,-11.3518,0	0/1:143:66,76:66:2349:76:2716:-201.577,0,-168.562	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	0/1:9:4,5:4:140:5:176:-13.4757,0,-10.2353	1/1:16:0,16:0:0:16:564:-51.0778,-4.81648,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:369:0,369:0:0:369:13234:-1190.86,-111.08,0	0/1:77:29,48:29:1019:48:1724:-132.266,0,-68.842	0/1:123:69,53:69:2459:53:1872:-131.512,0,-184.479	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/1:191:98,93:98:3472:93:3320:-241.522,0,-255.195	0/1:96:41,55:41:1459:55:1964:-148.136,0,-102.706	1/1:209:0,209:0:0:209:7431:-668.837,-62.9153,0	1/1:149:0,149:0:0:149:5297:-476.865,-44.8535,0	1/1:143:0,143:0:0:143:5115:-460.49,-43.0473,0	1/1:138:1,137:1:36:137:4885:-436.204,-37.9439,0	0/1:158:79,79:79:2796:79:2829:-207.284,0,-204.317	0/1:232:113,119:113:4033:119:4264:-314.099,0,-293.318	1/1:124:0,124:0:0:124:4398:-395.993,-37.3277,0	1/1:193:4,189:4:144:189:6731:-592.553,-44.7852,0	1/1:178:0,178:0:0:178:6367:-573.12,-53.5833,0	1/1:5:0,5:0:0:5:171:-15.7255,-1.50515,0	0/1:116:55,61:55:1960:61:2173:-160.915,0,-141.756	0/1:98:51,47:51:1824:47:1676:-121.626,0,-134.94	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	0/1:192:75,117:75:2661:117:4197:-320.112,0,-181.938	1/1:79:0,79:0:0:79:2832:-255.118,-23.7814,0	1/1:11:0,11:0:0:11:388:-35.2574,-3.31133,0	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	1/1:173:1,172:1:36:172:6118:-547.122,-48.4799,0	1/1:225:2,223:2:72:223:7884:-702.747,-60.895,0	1/1:13:0,13:0:0:13:460:-41.7354,-3.91339,0	0/1:186:96,90:96:3420:90:3219:-233.94,0,-252.021	1/1:235:3,232:3:108:232:8267:-733.919,-60.6669,0	1/1:96:0,96:0:0:96:3410:-307.114,-28.8989,0	1/1:123:0,122:0:0:122:4373:-393.526,-36.7257,0	1/1:206:1,205:1:36:205:7322:-655.43,-58.4139,0	1/1:123:0,123:0:0:123:4400:-396.173,-37.0267,0	1/1:134:1,133:1:32:133:4722:-421.941,-37.1387,0	1/1:65:0,65:0:0:65:2324:-209.42,-19.567,0	1/1:123:0,123:0:0:123:4376:-394.014,-37.0267,0	0/1:46:21,25:21:756:25:900:-67.4736,0,-54.5198	1/1:117:0,117:0:0:117:4184:-376.742,-35.2205,0	0/1:164:77,87:77:2747:87:3127:-232.278,0,-198.075	1/1:314:1,313:1:36:313:11152:-999.966,-90.9251,0	1/1:167:0,167:0:0:167:5983:-538.574,-50.272,0	1/1:150:0,150:0:0:150:5315:-478.486,-45.1545,0	1/1:156:1,155:1:36:155:5529:-494.138,-43.3624,0	0/1:31:14,17:14:491:17:600:-44.9973,0,-35.1892	1/1:163:0,163:0:0:163:5852:-526.79,-49.0679,0	0/1:130:69,61:69:2472:61:2166:-156.072,0,-183.6	1/1:397:0,397:0:0:397:14138:-1272.18,-119.509,0	1/1:118:0,118:0:0:118:4188:-377.103,-35.5215,0	1/1:255:0,255:0:0:255:9113:-820.145,-76.7627,0	1/1:142:1,141:1:36:141:4989:-445.52,-39.148,0	1/1:292:3,289:3:108:289:10326:-918.632,-77.8256,0	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	0/1:149:75,74:75:2679:74:2639:-192.903,0,-196.501	1/1:173:0,173:0:0:173:6169:-555.309,-52.0782,0	0/1:158:81,77:81:2859:77:2764:-201.438,0,-209.984	0/1:206:122,84:122:4303:84:2971:-205.61,0,-325.433	0/1:184:128,56:128:4570:56:2016:-126.323,0,-356.076	1/1:159:1,158:1:36:158:5633:-503.492,-44.2655,0	1/1:266:0,266:0:0:266:9494:-854.418,-80.074,0
chr08	31742612	.	C	T	27882.1	PASS	AB=0.558989;ABP=89.0884;AC=25;AF=0.132979;AN=188;AO=1608;CIGAR=1X;DP=9833;DPB=9833;DPRA=1.33243;EPP=3494.74;EPPR=17856.9;GTI=2;LEN=1;MEANALT=1.02857;MQM=59.5473;MQMR=59.6261;NS=94;NUMALT=1;ODDS=0.0675605;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57645;QR=293848;RO=8222;RPL=1608;RPP=3494.74;RPPR=17856.9;RPR=0;RUN=1;SAF=0;SAP=3494.74;SAR=1608;SRF=0;SRP=17856.9;SRR=8222;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:54:54,0:54:1923:0:0:0,-16.2556,-173.323	0/0:100:100,0:100:3592:0:0:0,-30.103,-323.43	0/0:115:115,0:115:4109:0:0:0,-34.6184,-369.87	0/0:138:137,1:137:4873:1:36:0,-37.9439,-435.057	0/0:55:55,0:55:1953:0:0:0,-16.5566,-176.023	0/0:35:35,0:35:1245:0:0:0,-10.536,-112.146	0/0:184:184,0:184:6589:0:0:0,-55.3895,-592.912	0/0:133:133,0:133:4721:0:0:0,-40.037,-424.985	0/0:90:90,0:90:3213:0:0:0,-27.0927,-289.375	0/0:116:115,0:115:4108:0:0:0,-34.6184,-369.424	0/0:103:103,0:103:3704:0:0:0,-31.0061,-333.03	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.921	0/0:91:91,0:91:3260:0:0:0,-27.3937,-293.612	0/0:107:107,0:107:3811:0:0:0,-32.2102,-343.093	0/0:93:93,0:93:3331:0:0:0,-27.9958,-299.966	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.005	0/0:90:90,0:90:3224:0:0:0,-27.0927,-290.371	0/0:79:79,0:79:2831:0:0:0,-23.7814,-254.979	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.646	0/0:182:182,0:182:6540:0:0:0,-54.7875,-588.629	0/0:161:161,0:161:5738:0:0:0,-48.4658,-515.252	0/1:106:16,90:16:572:90:3240:-259.908,0,-19.9024	0/0:78:78,0:78:2788:0:0:0,-23.4803,-251.154	0/1:126:64,62:64:2292:62:2222:-162.254,0,-168.602	0/0:52:52,0:52:1868:0:0:0,-15.6536,-168.31	0/1:344:164,180:164:5856:180:6452:-476.986,0,-423.532	0/0:168:168,0:168:5994:0:0:0,-50.573,-539.349	0/1:62:32,30:32:1148:30:1080:-78.8448,0,-84.966	0/0:191:191,0:191:6825:0:0:0,-57.4967,-614.306	0/0:109:105,3:105:3733:3:108:0,-22.7955,-325.546	0/1:133:46,87:46:1636:87:3097:-238.825,0,-107.489	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.3082	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0893	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/0:261:260,1:260:9286:1:36:0,-74.9716,-832.067	0/1:112:70,42:70:2508:42:1508:-102.295,0,-192.235	0/1:143:90,53:90:3219:53:1908:-128.92,0,-246.844	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1358	0/1:130:48,82:48:1709:82:2940:-225.57,0,-114.951	0/1:86:45,41:45:1607:41:1472:-106.874,0,-119.031	0/0:112:112,0:112:3997:0:0:0,-33.7154,-359.901	0/0:105:105,0:105:3772:0:0:0,-31.6081,-339.671	0/0:78:78,0:78:2796:0:0:0,-23.4803,-251.878	0/0:91:91,0:91:3252:0:0:0,-27.3937,-292.899	0/0:105:105,0:105:3764:0:0:0,-31.6081,-338.711	0/1:184:78,106:78:2787:106:3800:-286.602,0,-195.668	0/0:97:97,0:97:3445:0:0:0,-29.1999,-310.249	0/0:127:126,1:126:4520:1:36:0,-34.6325,-403.36	0/0:156:153,3:153:5457:3:108:0,-36.8855,-481.176	0/1:21:7,14:7:252:14:504:-39.3718,0,-16.705	0/1:205:88,117:88:3152:117:4177:-314.363,0,-222.113	0/1:43:21,22:21:722:22:792:-58.6614,0,-52.3459	0/1:18:9,9:9:320:9:324:-23.8064,0,-23.7238	0/1:158:48,110:48:1724:110:3922:-305.515,0,-107.733	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.126	0/0:69:69,0:69:2464:0:0:0,-20.7711,-221.8	0/0:180:178,2:178:6349:2:72:0,-47.3487,-564.627	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7881	0/1:215:79,136:79:2844:136:4873:-373.989,0,-191.417	0/0:198:197,1:197:7015:1:36:0,-56.0057,-627.214	0/0:93:93,0:93:3340:0:0:0,-27.9958,-300.775	0/0:54:53,1:53:1896:1:36:0,-12.6573,-167.307	0/0:144:144,0:144:5149:0:0:0,-43.3483,-463.454	0/0:97:97,0:97:3449:0:0:0,-29.1999,-310.608	0/0:65:65,0:65:2313:0:0:0,-19.5669,-208.429	0/0:89:88,0:88:3152:0:0:0,-26.4906,-283.261	0/0:154:154,0:154:5505:0:0:0,-46.3586,-495.559	0/1:30:16,14:16:576:14:496:-35.9434,0,-43.1441	0/0:162:162,0:162:5760:0:0:0,-48.7669,-518.421	0/1:78:35,43:35:1260:43:1544:-115.749,0,-90.2251	0/0:183:183,0:183:6537:0:0:0,-55.0885,-588.38	0/0:158:157,1:157:5633:1:36:0,-43.9645,-503.459	0/0:112:110,2:110:3928:2:72:0,-26.8786,-346.819	0/0:77:77,0:77:2734:0:0:0,-23.1793,-246.277	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4149	0/0:86:86,0:86:3054:0:0:0,-25.8886,-275.083	0/1:148:41,107:41:1468:107:3840:-300.567,0,-87.8503	0/0:226:226,0:226:8074:0:0:0,-68.0328,-726.379	0/0:140:140,0:140:5016:0:0:0,-42.1442,-451.546	0/0:91:91,0:91:3249:0:0:0,-27.3937,-292.614	0/0:117:117,0:117:4184:0:0:0,-35.2205,-376.713	0/0:160:160,0:160:5720:0:0:0,-48.1648,-514.909	0/0:45:45,0:45:1601:0:0:0,-13.5463,-144.362	0/1:101:48,53:48:1724:53:1908:-141.585,0,-125.019	0/0:89:89,0:89:3183:0:0:0,-26.7917,-286.649	0/1:99:56,43:56:2016:43:1548:-109.81,0,-151.897	0/1:190:108,82:108:3860:82:2948:-208.344,0,-290.372	0/1:87:28,59:28:981:59:2114:-164.332,0,-62.4114	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.155	0/0:121:121,0:121:4344:0:0:0,-36.4246,-390.977
chr08	31742618	.	ATGCT	TTGCT	180667	PASS	AB=0.440625;ABP=91.1992;AC=163;AF=0.867021;AN=188;AO=8219;CIGAR=1X4M;DP=9954;DPB=9964.4;DPRA=0;EPP=17850.3;EPPR=3490.39;GTI=3;LEN=1;MEANALT=1.75532;MQM=59.6027;MQMR=59.5616;NS=94;NUMALT=1;ODDS=0.946674;PAIRED=0;PAIREDR=0;PAO=26;PQA=692.5;PQR=0;PRO=0;QA=294074;QR=56800;RO=1606;RPL=8219;RPP=17850.3;RPPR=3490.39;RPR=0;RUN=1;SAF=0;SAP=17850.3;SAR=8219;SRF=0;SRP=3490.39;SRR=1606;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:55:0,55:0:0:55:1961:-176.739,-16.5567,0	1/1:101:0,101:0:0:101:3609:-324.905,-30.404,0	1/1:115:0,111:0:0:111:3962:-356.303,-33.4143,0	1/1:138:1,137:1:30:137:4859:-434.386,-38.5426,0	1/1:55:0,55:0:0:55:1964:-176.952,-16.5567,0	1/1:37:0,37:0:0:37:1322:-118.801,-11.1381,0	1/1:185:0,185:0:0:185:6591:-593.233,-55.6906,0	1/1:133:0,131:0:0:131:4674:-420.361,-39.4349,0	1/1:91:0,90:0:0:90:3224:-290.006,-27.0927,0	1/1:116:0,115:0:0:115:4125:-370.999,-34.6185,0	1/1:107:0,107:0:0:107:3825:-344.132,-32.2102,0	1/1:72:1,67:1:36:67:2393:-212.015,-17.226,0	1/1:94:0,90:0:0:90:3236:-291.084,-27.0927,0	1/1:111:0,110:0:0:110:3926:-353.125,-33.1133,0	1/1:94:0,91:0:0:91:3268:-293.938,-27.3937,0	1/1:70:0,68:0:0:68:2448:-220.172,-20.47,0	1/1:92:0,92:0:0:92:3285:-295.852,-27.6948,0	1/1:80:0,78:0:0:78:2804:-252.19,-23.4803,0	1/1:44:0,42:0:0:42:1502:-135.106,-12.6433,0	1/1:186:0,186:0:0:186:6619:-595.737,-55.9916,0	1/1:163:0,162:0:0:162:5742:-515.982,-48.7669,0	0/1:107:90,17:90:3211:17:612:-23.2014,0,-257.002	1/1:81:1,79:1:36:79:2810:-249.532,-20.844,0	0/1:128:62,64:62:2176:64:2300:-168.991,0,-157.788	1/1:54:0,53:0:0:53:1885:-169.497,-15.9546,0	0/1:351:180,169:180:6370:169:6068:-440.703,0,-467.788	1/1:173:0,173:0:0:173:6189:-556.891,-52.0782,0	0/1:62:30,31:30:1079:31:1101:-80.7242,0,-78.7443	1/1:194:0,194:0:0:194:6941:-624.619,-58.3998,0	1/1:109:3,104:3:108:104:3736:-325.741,-22.4799,0	0/1:136:87,49:87:3047:49:1764:-118.101,0,-233.444	0/1:15:6,9:6:214:9:324:-24.9904,0,-15.0924	1/1:23:0,23:0:0:23:828:-74.8359,-6.92369,0	1/1:15:0,12:0:0:12:432:-38.8907,-3.61236,0	1/1:14:0,13:0:0:13:468:-42.0916,-3.91339,0	0/1:15:4,11:4:144:11:388:-30.7419,0,-8.79817	1/1:262:1,256:1:36:256:9200:-824.327,-74.1262,0	0/1:113:42,71:42:1481:71:2541:-194.901,0,-99.5669	0/1:143:50,91:50:1778:91:3253:-250.135,0,-117.468	1/1:10:0,10:0:0:10:360:-32.735,-3.0103,0	0/1:133:84,49:84:2931:49:1745:-117.286,0,-223.937	0/1:85:41,44:41:1460:44:1579:-116.755,0,-106.036	1/1:114:0,113:0:0:113:4060:-365.143,-34.0164,0	1/1:107:0,107:0:0:107:3852:-346.747,-32.2102,0	1/1:79:0,73:0:0:73:2601:-233.977,-21.9752,0	1/1:93:0,91:0:0:91:3268:-293.889,-27.3937,0	1/1:105:0,105:0:0:105:3753:-337.669,-31.6082,0	0/1:185:105,78:105:3712:78:2773:-194.308,0,-278.821	1/1:101:0,100:0:0:100:3592:-323.117,-30.103,0	1/1:129:1,128:1:36:128:4596:-410.132,-35.2346,0	1/1:156:3,153:3:108:153:5496:-484.68,-36.8855,0	0/1:21:14,7:14:492:7:252:-16.705,0,-38.2855	0/1:209:118,90:118:4180:90:3228:-227.622,0,-313.311	0/1:43:22,21:22:771:21:752:-55.0233,0,-56.7658	0/1:18:9,8:9:311:8:288:-20.7901,0,-22.6798	0/1:160:109,50:109:3866:50:1791:-113.166,0,-299.94	1/1:29:0,27:0:0:27:972:-87.4427,-8.12781,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:20:0,20:0:0:20:712:-64.3467,-6.0206,0	1/1:72:0,72:0:0:72:2569:-231.244,-21.6742,0	1/1:183:2,175:2:72:175:6258:-556.443,-46.8054,0	1/1:6:0,6:0:0:6:216:-19.7881,-1.80618,0	0/1:215:133,75:133:4697:75:2696:-179.844,0,-359.851	1/1:202:1,201:1:36:201:7166:-640.616,-57.2098,0	1/1:93:0,93:0:0:93:3306:-297.66,-27.9958,0	1/1:55:1,54:1:36:54:1921:-169.559,-12.9584,0	1/1:144:0,143:0:0:143:5082:-456.82,-43.0473,0	1/1:97:0,97:0:0:97:3461:-311.629,-29.1999,0	1/1:65:0,65:0:0:65:2336:-210.44,-19.567,0	1/1:89:3,86:3:108:86:3088:-267.778,-16.7165,0	1/1:155:0,146:0:0:146:5226:-470.047,-43.9504,0	0/1:30:14,16:14:499:16:576:-43.1441,0,-36.2149	1/1:163:0,162:0:0:162:5795:-521.161,-48.7669,0	0/1:78:42,35:42:1479:35:1260:-90.1664,0,-109.847	1/1:198:0,195:0:0:195:6980:-627.896,-58.7009,0	1/1:159:1,156:1:36:156:5540:-495.068,-44.0333,0	1/1:112:2,110:2:69:110:3918:-346.166,-27.1929,0	1/1:76:0,75:0:0:75:2684:-241.369,-22.5773,0	1/1:27:0,27:0:0:27:968:-87.4149,-8.12781,0	1/1:86:0,85:0:0:85:3052:-274.544,-25.5876,0	0/1:150:106,43:106:3753:43:1544:-93.9687,0,-292.087	1/1:227:1,223:1:34:223:7997:-715.84,-64.3817,0	1/1:139:0,136:0:0:136:4896:-440.389,-40.9401,0	1/1:93:1,89:1:36:89:3200:-284.606,-23.8543,0	1/1:114:0,113:0:0:113:4058:-364.778,-34.0164,0	1/1:161:0,158:0:0:158:5661:-509.221,-47.5627,0	1/1:46:0,44:0:0:44:1580:-142.112,-13.2453,0	0/1:101:52,48:52:1863:48:1728:-125.321,0,-137.479	1/1:89:0,87:0:0:87:3132:-281.694,-26.1896,0	0/1:100:42,56:42:1478:56:1999:-150.307,0,-103.452	0/1:193:80,109:80:2837:109:3886:-292.658,0,-198.309	0/1:89:61,28:61:2154:28:1000:-63.5237,0,-167.328	1/1:72:0,71:0:0:71:2518:-226.381,-21.3731,0	1/1:120:0,113:0:0:113:4064:-365.429,-34.0164,0
chr08	32227289	.	ATG	CTG,CTA	101704	PASS	AB=0.525092,0.471236;ABP=7.47816,8.88151;AC=166,22;AF=0.882979,0.117021;AN=188;AO=3232,390;CIGAR=1X2M,1X1M1X;DP=3635;DPB=3635;DPRA=0,1.00906;EPP=102.081,179.423;EPPR=9.52472;GTI=1;LEN=1,3;MEANALT=1.37234,2.11538;MQM=59.1482,46.9949;MQMR=60;NS=94;NUMALT=2;ODDS=4.6624;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=115545,13662;QR=104;RO=3;RPL=1424,106;RPP=102.081,179.423;RPPR=9.52472;RPR=1808,284;RUN=1,1;SAF=0,0;SAP=7021.21,849.885;SAR=3232,390;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:32:1,31,0:1:34:31,0:1112,0:-96.934,-6.23405,0,-97.235,-9.33193,-99.9924	1/1:10:0,10,0:0:0:10,0:356,0:-32.3808,-3.0103,0,-32.3808,-3.0103,-32.3808	1/1:179:2,177,0:2:70:177,0:6329,0:-562.811,-47.237,0,-563.413,-53.2823,-569.109	1/1:69:0,69,0:0:0:69,0:2477,0:-223.055,-20.7711,0,-223.055,-20.7711,-223.055	1/1:44:0,43,0:0:0:43,0:1544,0:-138.803,-12.9443,0,-138.803,-12.9443,-138.803	1/1:21:0,21,0:0:0:21,0:756,0:-68.1878,-6.32163,0,-68.1878,-6.32163,-68.1878	1/1:26:0,26,0:0:0:26,0:932,0:-84.1626,-7.82678,0,-84.1626,-7.82678,-84.1626	1/1:46:0,46,0:0:0:46,0:1656,0:-149.307,-13.8474,0,-149.307,-13.8474,-149.307	1/1:46:0,46,0:0:0:46,0:1631,0:-147.004,-13.8474,0,-147.004,-13.8474,-147.004	1/1:28:0,28,0:0:0:28,0:989,0:-89.2803,-8.42884,0,-89.2803,-8.42884,-89.2803	1/1:36:0,36,0:0:0:36,0:1292,0:-116.548,-10.8371,0,-116.548,-10.8371,-116.548	1/1:31:0,31,0:0:0:31,0:1112,0:-100.39,-9.33193,0,-100.39,-9.33193,-100.39	1/1:34:0,34,0:0:0:34,0:1224,0:-110.323,-10.235,0,-110.323,-10.235,-110.323	1/1:23:0,22,0:0:0:22,0:783,0:-70.4357,-6.62266,0,-70.4357,-6.62266,-70.4357	1/1:31:0,31,0:0:0:31,0:1104,0:-99.3097,-9.33193,0,-99.3097,-9.33193,-99.3097	1/1:20:0,20,0:0:0:20,0:720,0:-65.1003,-6.0206,0,-65.1003,-6.0206,-65.1003	1/1:16:0,16,0:0:0:16,0:576,0:-52.139,-4.81648,0,-52.139,-4.81648,-52.139	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/1:18:0,18,0:0:0:18,0:648,0:-58.616,-5.41854,0,-58.616,-5.41854,-58.616	1/1:29:0,29,0:0:0:29,0:1036,0:-93.5218,-8.72987,0,-93.5218,-8.72987,-93.5218	1/1:73:0,73,0:0:0:73,0:2593,0:-233.534,-21.9752,0,-233.534,-21.9752,-233.534	1/1:27:0,27,0:0:0:27,0:960,0:-86.6795,-8.12781,0,-86.6795,-8.12781,-86.6795	1/1:35:0,35,0:0:0:35,0:1256,0:-113.291,-10.5361,0,-113.291,-10.5361,-113.291	1/2:22:0,13,9:0:0:13,9:464,318:-63.8073,-26.0081,-22.0947,-38.152,0,-35.4427	1/1:29:0,29,0:0:0:29,0:1036,0:-93.5539,-8.72987,0,-93.5539,-8.72987,-93.5539	1/2:60:0,26,34:0:0:26,34:936,1174:-171.55,-95.2054,-87.3786,-76.6968,0,-66.4618	1/1:75:0,75,0:0:0:75,0:2676,0:-240.962,-22.5773,0,-240.962,-22.5773,-240.962	1/2:13:0,9,4:0:0:9,4:324,140:-38.1104,-11.6654,-8.95611,-26.7966,0,-25.5925	1/1:64:0,64,0:0:0:64,0:2277,0:-205.116,-19.2659,0,-205.116,-19.2659,-205.116	1/1:42:0,41,1:0:0:41,1:1442,36:-129.388,-12.3422,0,-126.473,-9.06983,-126.172	1/2:24:0,13,11:0:0:13,11:468,367:-68.0956,-29.9079,-25.9946,-38.5324,0,-35.2211	1/2:63:0,28,35:0:0:28,35:990,1227:-179.465,-99.2376,-90.8088,-80.5769,0,-70.0408	1/1:22:0,22,0:0:0:22,0:792,0:-71.5607,-6.62266,0,-71.5607,-6.62266,-71.5607	1/2:33:0,23,10:0:0:23,10:828,323:-93.6517,-26.158,-19.2343,-67.826,0,-64.8157	1/1:98:0,97,0:0:0:97,0:3472,0:-312.025,-29.1999,0,-312.025,-29.1999,-312.025	1/2:68:0,40,28:0:0:40,28:1434,990:-195.951,-79.2578,-67.2166,-117.045,0,-108.616	1/1:83:0,83,0:0:0:83,0:2984,0:-268.78,-24.9855,0,-268.78,-24.9855,-268.78	1/1:65:0,65,0:0:0:65,0:2316,0:-208.601,-19.567,0,-208.601,-19.567,-208.601	1/1:30:0,30,0:0:0:30,0:1080,0:-97.4774,-9.0309,0,-97.4774,-9.0309,-97.4774	1/1:21:0,21,0:0:0:21,0:729,0:-65.9287,-6.32163,0,-65.9287,-6.32163,-65.9287	1/2:33:0,14,19:0:0:14,19:496,675:-94.7889,-54.456,-50.2416,-40.6848,0,-34.9653	1/2:20:0,9,11:0:0:9,11:324,392:-58.4842,-32.0681,-29.3589,-26.773,0,-23.4617	1/1:39:0,38,1:0:0:38,1:1355,36:-121.609,-11.4391,0,-118.694,-8.16674,-118.393	1/1:22:0,22,0:0:0:22,0:786,0:-70.7763,-6.62266,0,-70.7763,-6.62266,-70.7763	1/1:16:0,16,0:0:0:16,0:576,0:-52.1726,-4.81648,0,-52.1726,-4.81648,-52.1726	1/1:31:0,31,0:0:0:31,0:1112,0:-100.355,-9.33193,0,-100.355,-9.33193,-100.355	1/1:36:0,36,0:0:0:36,0:1280,0:-115.485,-10.8371,0,-115.485,-10.8371,-115.485	1/2:63:0,32,31:0:0:32,31:1129,1091:-180.566,-88.7041,-79.0712,-92.2135,0,-82.8816	1/1:34:0,34,0:0:0:34,0:1219,0:-109.989,-10.235,0,-109.989,-10.235,-109.989	1/1:38:0,38,0:0:0:38,0:1359,0:-122.569,-11.4391,0,-122.569,-11.4391,-122.569	1/1:38:0,38,0:0:0:38,0:1368,0:-123.409,-11.4391,0,-123.409,-11.4391,-123.409	1/1:44:0,44,0:0:0:44,0:1572,0:-141.753,-13.2453,0,-141.753,-13.2453,-141.753	1/2:39:0,13,26:0:0:13,26:464,923:-111.635,-73.8893,-69.976,-38.099,0,-30.2722	1/1:19:0,19,0:0:0:19,0:669,0:-60.4944,-5.71957,0,-60.4944,-5.71957,-60.4944	1/2:10:0,9,1:0:0:9,1:324,36:-29.6979,-3.25759,-0.548317,-26.7966,0,-26.4956	1/2:54:0,33,21:0:0:33,21:1180,742:-155.06,-59.0512,-49.1172,-96.3582,0,-90.0366	1/1:8:0,8,0:0:0:8,0:269,0:-24.5222,-2.40824,0,-24.5222,-2.40824,-24.5222	1/1:43:0,43,0:0:0:43,0:1536,0:-138.414,-12.9443,0,-138.414,-12.9443,-138.414	1/1:54:0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chr09	54353	.	T	A	89990.2	PASS	AB=0.575006;ABP=401.074;AC=53;AF=0.281915;AN=188;AO=4701;CIGAR=1X;DP=13963;DPB=13963;DPRA=1.23776;EPP=10202.4;EPPR=20000.2;GTI=3;LEN=1;MEANALT=1.09677;MQM=44.037;MQMR=55.2279;NS=94;NUMALT=1;ODDS=0.838135;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=167847;QR=328135;RO=9253;RPL=2160;RPP=70.0627;RPPR=27.494;RPR=2541;RUN=1;SAF=2161;SAP=69.3605;SAR=2540;SRF=4799;SRP=30.9428;SRR=4454;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:92:45,47:45:1612:47:1684:-89.3582,0,-117.007	0/0:224:224,0:224:7896:0:0:0,-67.4307,-708.433	0/0:343:341,0:341:12122:0:0:0,-102.651,-1081.51	0/0:259:259,0:259:9167:0:0:0,-77.9668,-821.771	0/1:96:46,50:46:1640:50:1792:-118.367,0,-118.727	0/1:88:27,61:27:960:61:2154:-147.811,0,-60.099	0/0:224:224,0:224:7932:0:0:0,-67.4307,-711.576	0/0:228:227,1:227:8052:1:36:0,-65.0366,-716.855	0/1:204:101,103:101:3580:103:3680:-213.139,0,-258.893	0/0:121:121,0:121:4291:0:0:0,-36.4246,-385.298	0/1:75:38,37:38:1343:37:1317:-80.8202,0,-98.491	0/1:121:56,65:56:1980:65:2319:-127.748,0,-141.424	0/1:119:55,64:55:1944:64:2281:-124.752,0,-138.738	0/0:133:133,0:133:4728:0:0:0,-40.037,-422.717	0/1:99:47,52:47:1676:52:1864:-117.954,0,-121.164	0/1:85:42,43:42:1479:43:1539:-90.7328,0,-107.608	0/0:111:111,0:111:3935:0:0:0,-33.4143,-352.848	0/0:76:76,0:76:2662:0:0:0,-22.8783,-239.107	0/0:53:53,0:53:1839:0:0:0,-15.9546,-165.119	0/1:314:118,196:118:4181:196:7018:-464.204,0,-281.34	0/1:230:90,140:90:3202:140:4992:-321.209,0,-218.418	0/1:128:30,98:30:1072:98:3499:-240.136,0,-58.2003	0/1:124:52,72:52:1852:72:2586:-157.49,0,-128.564	0/1:230:85,145:85:3036:145:5132:-340.537,0,-203.783	0/0:119:117,1:117:4176:1:36:0,-33.3009,-371.371	0/1:355:155,200:155:5520:200:7165:-497.965,0,-389.186	0/1:498:209,287:209:7418:287:10237:-619.614,0,-515.234	0/1:50:24,26:24:860:26:936:-53.1466,0,-62.2797	0/0:439:437,2:437:15496:2:72:0,-125.315,-1384.69	0/0:219:219,0:219:7737:0:0:0,-65.9256,-694.223	0/0:169:166,3:166:5908:3:93:0,-42.1973,-522.318	0/0:13:13,0:13:460:0:0:0,-3.91339,-41.6729	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.527	0/1:20:9,11:9:324:11:396:-27.5632,0,-23.4714	0/1:12:6,6:6:204:6:216:-10.3874,0,-15.0631	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.6608	0/1:266:152,114:152:5375:114:4083:-244.804,0,-403.175	0/0:133:131,2:131:4647:2:72:0,-33.2003,-410.537	0/1:100:51,49:51:1784:49:1743:-98.6289,0,-130.012	0/1:4:3,1:3:99:1:36:-2.39415,0,-8.03246	0/1:225:102,123:102:3599:123:4408:-280.82,0,-256.036	0/1:46:23,23:23:828:23:811:-49.4746,0,-60.6133	0/1:345:116,229:116:4104:229:8161:-536.514,0,-264.9	0/1:107:46,61:46:1628:61:2184:-148.478,0,-114.467	0/0:82:82,0:82:2924:0:0:0,-24.6845,-262.565	0/0:137:137,0:137:4867:0:0:0,-41.2411,-437.512	0/0:154:154,0:154:5488:0:0:0,-46.3586,-491.148	0/0:232:232,0:232:8175:0:0:0,-69.839,-734.199	0/1:188:90,97:90:3202:97:3444:-213.283,0,-230.66	0/1:195:100,95:100:3559:95:3404:-206.536,0,-261.123	0/0:181:181,0:181:6442:0:0:0,-54.4864,-579.067	0/0:13:13,0:13:460:0:0:0,-3.91339,-41.7105	0/0:183:183,0:183:6513:0:0:0,-55.0885,-582.54	0/1:79:37,41:37:1320:41:1455:-92.9494,0,-94.3665	0/1:37:11,26:11:396:26:916:-65.989,0,-24.7737	0/1:200:76,124:76:2694:124:4432:-280.044,0,-181.731	0/0:96:95,1:95:3363:1:36:0,-25.3006,-295.796	0/1:21:6,15:6:208:15:540:-37.679,0,-12.7341	0/0:19:19,0:19:671:0:0:0,-5.71957,-60.4895	0/0:153:153,0:153:5429:0:0:0,-46.0576,-486.988	0/1:158:90,68:90:3174:68:2405:-148.671,0,-237.901	0/1:14:2,12:2:72:12:432:-35.0068,0,-2.60928	0/0:147:147,0:147:5243:0:0:0,-44.2514,-471.072	0/1:264:133,131:133:4711:131:4666:-302.44,0,-344.129	0/1:146:53,93:53:1860:93:3321:-215.628,0,-123.502	0/0:102:102,0:102:3632:0:0:0,-30.7051,-325.307	0/1:208:90,118:90:3180:118:4217:-259.406,0,-222.773	0/1:214:64,150:64:2283:150:5376:-339.218,0,-140.997	0/1:53:23,30:23:810:30:1072:-69.2075,0,-57.1244	0/1:142:59,83:59:2112:83:2975:-176.311,0,-146.763	0/1:103:35,68:35:1243:68:2428:-165.891,0,-80.4259	0/1:42:16,26:16:564:26:932:-58.9796,0,-38.0328	0/1:224:103,121:103:3670:121:4328:-230.809,0,-260.82	0/1:163:56,107:56:1983:107:3843:-219.598,0,-128.771	0/1:356:147,209:147:5206:209:7449:-475.177,0,-359.642	0/0:215:215,0:215:7586:0:0:0,-64.7214,-681.507	0/0:167:167,0:167:5907:0:0:0,-50.272,-528.647	0/1:179:80,99:80:2856:99:3523:-227.882,0,-202.759	0/0:26:26,0:26:907:0:0:0,-7.82678,-81.8915	0/0:174:171,2:171:6107:2:72:0,-46.6452,-542.113	0/1:196:86,110:86:3012:110:3918:-238.894,0,-210.61	0/1:341:124,216:124:4426:216:7746:-502.483,0,-294.588	0/1:104:48,56:48:1694:56:1962:-132.223,0,-120.992	0/0:99:99,0:99:3490:0:0:0,-29.802,-313.312	0/1:81:38,43:38:1338:43:1536:-98.7252,0,-95.5498	0/0:187:183,4:183:6477:4:144:0,-44.7359,-570.092	0/0:43:43,0:43:1524:0:0:0,-12.9443,-136.721	0/1:93:44,49:44:1567:49:1755:-105.051,0,-112.549	0/0:116:116,0:116:4108:0:0:0,-34.9195,-368.589	0/0:85:85,0:85:3028:0:0:0,-25.5875,-271.545	0/1:178:86,92:86:3030:92:3299:-191.492,0,-218.598	0/1:134:32,102:32:1127:102:3643:-242.723,0,-61.2913	0/0:142:142,0:142:5051:0:0:0,-42.7463,-453.672	0/0:163:162,1:162:5778:1:36:0,-45.4696,-515.447
chr09	54361	.	TGCATGCAG	AGCAAGCAG,TGCAAGCAA	369475	PASS	AB=0.436994,0.555608;ABP=296.619,231.712;AC=135,53;AF=0.718085,0.281915;AN=188;AO=9884,4746;CIGAR=1X3M1X4M,4M1X3M1X;DP=14770;DPB=14770.9;DPRA=0,1.18553;EPP=21465.8,10308.8;EPPR=0;GTI=2;LEN=9,9;MEANALT=3.02128,3.21311;MQM=55.4054,44.0978;MQMR=0;NS=94;NUMALT=2;ODDS=1.13492;PAIRED=0,0;PAIREDR=0;PAO=3,2;PQA=100,72;PQR=0;PRO=0;QA=345566,167212;QR=0;RO=0;RPL=4941,2176;RPP=3.01118,74.0366;RPPR=0;RPR=4943,2570;RUN=1,1;SAF=4941,2176;SAP=3.01118,74.0366;SAR=4943,2570;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:94:0,47,47:0:0:47,47:1650,1670:-236.294,-102.577,-88.4281,-134.03,0,-119.882	1/1:242:0,238,0:0:0:238,0:8315,0:-746.436,-71.6451,0,-746.436,-71.6451,-746.436	1/1:354:0,351,0:0:0:351,0:12285,0:-1098.56,-105.662,0,-1098.56,-105.662,-1098.56	1/1:276:0,269,0:0:0:269,0:9425,0:-846.444,-80.9771,0,-846.444,-80.9771,-846.444	1/2:99:0,48,51:0:0:48,51:1703,1800:-271.75,-133.244,-118.795,-138.845,0,-123.492	1/2:95:0,32,63:0:0:32,63:1091,2205:-248.132,-159.784,-150.152,-88.6787,0,-69.7139	1/1:234:0,234,0:0:0:234,0:8195,0:-736.026,-70.441,0,-736.026,-70.441,-736.026	1/1:248:0,246,1:0:0:246,1:8576,36:-768.109,-74.0534,0,-765.171,-71.1008,-764.87	1/2:214:0,106,105:0:0:106,105:3741,3689:-546.305,-243.597,-211.688,-302.682,0,-271.074	1/1:142:0,141,0:0:0:141,0:4859,0:-436.579,-42.4452,0,-436.579,-42.4452,-436.579	1/2:78:0,41,37:0:0:41,37:1450,1312:-209.373,-91.5294,-79.1872,-117.814,0,-106.676	1/2:126:0,60,64:0:0:60,64:2104,2246:-310.558,-139.924,-121.862,-170.624,0,-151.358	1/2:125:0,61,64:0:0:61,64:2108,2267:-312.587,-141.878,-123.515,-171.022,0,-151.756	1/1:147:0,145,0:0:0:145,0:5030,0:-450.735,-43.6494,0,-450.735,-43.6494,-450.735	1/2:103:0,50,52:0:0:50,52:1784,1850:-276.615,-131.318,-116.267,-145.273,0,-129.619	1/2:89:0,43,44:0:0:43,44:1486,1545:-225.727,-105.156,-92.2121,-120.536,0,-107.29	1/1:127:0,124,0:0:0:124,0:4343,0:-389.568,-37.3277,0,-389.568,-37.3277,-389.568	1/1:85:0,83,0:0:0:83,0:2878,0:-258.443,-24.9855,0,-258.443,-24.9855,-258.443	1/1:61:0,61,0:0:0:61,0:2110,0:-189.522,-18.3628,0,-189.522,-18.3628,-189.522	1/2:331:0,134,196:0:0:134,196:4716,6946:-879.824,-496.513,-456.175,-383.383,0,-324.381	1/2:244:0,101,141:0:0:101,141:3512,4975:-632.17,-347.326,-316.922,-284.816,0,-242.37	1/2:131:0,32,99:0:0:32,99:1107,3491:-339.94,-250.031,-240.398,-90.2469,0,-60.4449	1/2:132:0,58,74:0:0:58,74:2031,2590:-339.617,-175.002,-157.543,-164.94,0,-142.663	1/2:237:0,90,146:0:0:90,146:3173,5156:-627.906,-369.984,-342.891,-257.901,0,-213.951	1/1:122:0,117,1:0:0:117,1:4112,36:-368.278,-35.2205,0,-366.359,-33.3156,-366.058	1/2:378:0,169,203:0:0:169,203:5882,7129:-1020.7,-542.771,-491.897,-477.941,0,-416.832	1/2:513:0,224,285:0:0:224,285:7810,10040:-1303.59,-671.613,-604.182,-632.047,0,-546.253	1/2:52:0,25,27:0:0:25,27:889,955:-134.123,-62.0267,-54.5009,-72.4184,0,-64.2906	1/1:459:0,455,2:0:0:455,2:15945,70:-1432.81,-136.969,0,-1427.11,-131.275,-1426.51	1/1:239:0,237,0:0:0:237,0:8295,0:-744.942,-71.3441,0,-744.942,-71.3441,-744.942	1/1:182:0,178,3:0:0:178,3:6216,104:-558.465,-53.5833,0,-550.012,-45.095,-549.109	1/1:13:0,13,0:0:0:13,0:464,0:-42.0367,-3.91339,0,-42.0367,-3.91339,-42.0367	1/1:22:0,22,0:0:0:22,0:790,0:-71.293,-6.62266,0,-71.293,-6.62266,-71.293	1/2:20:0,9,11:0:0:9,11:308,386:-54.4533,-29.4517,-26.7424,-25.3372,0,-22.0258	1/2:12:0,6,6:0:0:6,6:212,216:-29.4908,-12.1936,-10.3874,-17.6009,0,-15.7948	1/1:17:0,17,0:0:0:17,0:573,0:-51.7703,-5.11751,0,-51.7703,-5.11751,-51.7703	1/2:282:0,165,115:0:0:165,115:5730,4063:-755.606,-290.044,-240.374,-465.563,0,-430.944	1/1:139:0,135,2:0:0:135,2:4707,71:-422.63,-40.6391,0,-416.845,-34.8314,-416.243	1/2:107:0,56,51:0:0:56,51:1969,1788:-276.931,-117.23,-100.372,-160.019,0,-144.667	1/2:4:0,3,1:0:0:3,1:98,36:-11.1859,-3.29724,-2.39415,-8.2402,0,-7.93917	1/2:238:0,109,129:0:0:109,129:3849,4536:-635.177,-322.117,-289.305,-313.393,0,-274.56	1/2:46:0,23,23:0:0:23,23:815,794:-121.393,-55.3414,-48.4177,-66.3771,0,-59.4535	1/2:367:0,135,231:0:0:135,231:4659,8148:-949.516,-571.754,-531.115,-377.753,0,-308.215	1/2:113:0,52,59:0:0:52,59:1802,2089:-301.188,-155.109,-139.456,-146.076,0,-128.315	1/1:89:0,88,0:0:0:88,0:3067,0:-275.562,-26.4906,0,-275.562,-26.4906,-275.562	1/1:146:0,144,0:0:0:144,0:5027,0:-451.672,-43.3483,0,-451.672,-43.3483,-451.672	1/1:169:0,166,0:0:0:166,0:5843,0:-523.38,-49.971,0,-523.38,-49.971,-523.38	1/1:258:0,252,0:0:0:252,0:8755,0:-786.472,-75.8596,0,-786.472,-75.8596,-786.472	1/2:192:0,91,98:0:0:91,98:3189,3406:-498.471,-239.815,-212.421,-258.673,0,-229.172	1/2:202:0,105,96:0:0:105,96:3708,3418:-537.85,-236.448,-204.84,-301.372,0,-272.473	1/1:198:0,196,0:0:0:196,0:6861,0:-616.501,-59.0019,0,-616.501,-59.0019,-616.501	1/1:13:0,13,0:0:0:13,0:462,0:-41.8915,-3.91339,0,-41.8915,-3.91339,-41.8915	1/1:200:0,198,0:0:0:198,0:6957,0:-622.921,-59.6039,0,-622.921,-59.6039,-622.921	1/2:83:0,41,42:0:0:41,42:1449,1498:-225.487,-108.247,-95.9044,-117.575,0,-104.932	1/2:40:0,12,28:0:0:12,28:430,961:-107.659,-72.6594,-69.047,-35.346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chr09	54394	.	G	C	98925.2	PASS	AB=0.433606;ABP=167.08;AC=134;AF=0.712766;AN=188;AO=4891;CIGAR=1X;DP=7346;DPB=7346;DPRA=6.57168;EPP=10623.7;EPPR=5299.25;GTI=2;LEN=1;MEANALT=1.06452;MQM=59.5831;MQMR=59.7152;NS=94;NUMALT=1;ODDS=0.10969;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=174501;QR=86355;RO=2447;RPL=4891;RPP=10623.7;RPPR=5299.25;RPR=0;RUN=1;SAF=0;SAP=10623.7;SAR=4891;SRF=0;SRP=5316.6;SRR=2447;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:17,6:17:588:6:207:-12.0432,0,-46.318	1/1:159:0,159:0:0:159:5682:-511.357,-47.8638,0	1/1:64:0,63:0:0:63:2251:-202.414,-18.9649,0	1/1:128:1,125:1:36:125:4463:-398.224,-34.6913,0	0/1:56:35,21:35:1231:21:752:-51.144,0,-94.2264	0/1:65:44,21:44:1568:21:746:-47.8941,0,-121.837	1/1:105:0,105:0:0:105:3749:-337.431,-31.6082,0	1/1:127:1,126:1:36:126:4480:-399.752,-34.6325,0	0/1:94:55,39:55:1940:39:1396:-97.5911,0,-146.547	1/1:77:0,77:0:0:77:2747:-247.464,-23.1793,0	0/1:38:16,22:16:563:22:784:-59.4424,0,-39.5597	0/1:45:25,20:25:892:20:720:-51.5579,0,-67.0452	0/1:45:24,21:24:847:21:748:-54.0826,0,-62.9938	1/1:82:0,82:0:0:82:2899:-260.751,-24.6845,0	0/1:50:27,23:27:934:23:828:-59.7926,0,-69.3127	0/1:45:20,25:20:703:25:887:-66.5925,0,-50.0472	1/1:86:0,86:0:0:86:3072:-276.533,-25.8886,0	1/1:72:0,72:0:0:72:2560:-230.605,-21.6742,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	0/1:190:109,81:109:3788:81:2912:-205.09,0,-283.925	0/1:145:74,71:74:2623:71:2528:-184.098,0,-192.654	0/1:57:44,13:44:1568:13:460:-24.5767,0,-124.25	0/1:39:26,13:26:916:13:468:-30.7191,0,-70.8931	0/1:133:89,44:89:3155:44:1580:-102.428,0,-244.127	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	0/1:220:137,83:137:4847:83:2961:-200.484,0,-370.156	0/1:226:132,91:132:4647:91:3223:-222.558,0,-350.089	0/1:16:9,7:9:324:7:252:-18.2078,0,-24.6894	1/1:224:1,223:1:32:223:7996:-716.413,-64.2314,0	1/1:164:0,164:0:0:164:5875:-528.791,-49.3689,0	1/1:95:2,93:2:72:93:3327:-292.774,-21.7611,0	1/1:7:0,7:0:0:7:252:-23.0243,-2.10721,0	1/1:11:0,11:0:0:11:396:-35.9781,-3.31133,0	0/1:18:9,9:9:320:9:320:-23.7099,0,-23.7238	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	1/1:9:0,9:0:0:9:320:-29.1414,-2.70927,0	0/1:127:53,74:53:1884:74:2641:-199.692,0,-131.608	1/1:72:2,70:2:72:70:2491:-217.587,-14.8374,0	0/1:49:22,27:22:783:27:972:-73.0474,0,-56.029	0/1:4:1,3:1:36:3:104:-8.49868,0,-2.39415	0/1:147:75,72:75:2646:72:2588:-188.908,0,-194.114	0/1:20:12,8:12:416:8:288:-20.2406,0,-31.751	0/1:203:126,77:126:4425:77:2751:-186.694,0,-337.298	0/1:71:41,30:41:1439:30:1062:-74.5122,0,-108.431	1/1:52:0,52:0:0:52:1850:-166.714,-15.6536,0	1/1:30:0,30:0:0:30:1076:-97.1462,-9.0309,0	1/1:102:0,101:0:0:101:3606:-324.302,-30.404,0	1/1:125:0,125:0:0:125:4396:-395.725,-37.6288,0	0/1:84:49,35:49:1743:35:1239:-86.5182,0,-131.835	0/1:106:44,62:44:1568:62:2213:-167.519,0,-109.498	1/1:90:0,90:0:0:90:3197:-287.943,-27.0927,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:102:0,102:0:0:102:3629:-326.736,-30.7051,0	0/1:40:20,20:20:708:20:705:-51.6249,0,-52.0044	0/1:30:23,7:23:816:7:252:-13.9981,0,-64.7308	0/1:110:64,46:64:2259:46:1636:-114.414,0,-170.453	1/1:29:1,28:1:36:28:995:-86.2634,-5.1316,0	0/1:15:8,7:8:288:7:252:-18.5111,0,-21.7486	1/1:16:0,16:0:0:16:572:-51.7674,-4.81648,0	1/1:61:0,61:0:0:61:2172:-195.729,-18.3628,0	0/1:89:40,49:40:1423:49:1737:-129.814,0,-101.57	0/0:12:12,0:12:420:0:0:0,-3.61236,-38.134	1/1:75:0,75:0:0:75:2675:-240.992,-22.5773,0	0/1:176:77,99:77:2718:99:3526:-264.485,0,-191.854	0/1:89:54,35:54:1906:35:1248:-85.8314,0,-145.019	1/1:53:0,53:0:0:53:1890:-170.375,-15.9546,0	0/1:93:46,47:46:1611:47:1676:-123.052,0,-117.28	0/1:78:54,24:54:1928:24:857:-53.9701,0,-150.309	0/1:29:17,12:17:595:12:432:-30.4913,0,-45.145	0/1:63:43,20:43:1528:20:716:-45.7946,0,-118.848	0/1:59:33,26:33:1180:26:921:-65.3805,0,-88.7439	0/1:18:11,7:11:388:7:252:-17.608,0,-29.8388	0/1:85:41,44:41:1443:44:1558:-114.922,0,-104.571	0/1:55:39,16:39:1363:16:572:-35.2568,0,-106.399	0/1:203:117,86:117:4135:86:3076:-215.907,0,-311.199	1/1:147:0,147:0:0:147:5233:-470.925,-44.2514,0	1/1:87:0,87:0:0:87:3109:-279.789,-26.1896,0	0/1:134:73,61:73:2567:61:2184:-156.48,0,-190.901	1/1:24:0,24:0:0:24:859:-77.6259,-7.22472,0	1/1:112:0,112:0:0:112:4007:-360.781,-33.7154,0	0/1:113:61,52:61:2156:52:1849:-132.663,0,-160.264	0/1:176:106,70:106:3738:70:2489:-171.269,0,-283.553	0/1:67:37,30:37:1312:30:1068:-76.2573,0,-98.2127	1/1:48:0,48:0:0:48:1716:-154.72,-14.4494,0	0/1:53:26,27:26:907:27:963:-71.0264,0,-65.9898	1/1:91:2,89:2:72:89:3196:-281.016,-20.557,0	1/1:34:0,34:0:0:34:1220:-110.062,-10.235,0	0/1:45:27,18:27:951:18:644:-44.7361,0,-72.3383	1/1:47:0,47:0:0:47:1671:-150.638,-14.1484,0	1/1:37:0,37:0:0:37:1328:-119.811,-11.1381,0	0/1:78:43,35:43:1506:35:1235:-87.9685,0,-112.318	0/1:65:48,17:48:1687:17:611:-35.752,0,-132.544	1/1:67:0,66:0:0:66:2364:-212.654,-19.868,0	1/1:75:1,74:1:36:74:2655:-235.592,-18.979,0
chr09	250029	.	A	T	107715	PASS	AB=0.506842;ABP=6.87324;AC=53;AF=0.281915;AN=188;AO=4859;CIGAR=1X;DP=17539;DPB=17539;DPRA=1.6254;EPP=10554.2;EPPR=27537.3;GTI=1;LEN=1;MEANALT=1;MQM=53.6668;MQMR=56.2737;NS=94;NUMALT=1;ODDS=3.07125;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=173810;QR=453337;RO=12680;RPL=2352;RPP=13.747;RPPR=2743.04;RPR=2507;RUN=1;SAF=2507;SAP=13.747;SAR=2352;SRF=8340;SRP=2743.04;SRR=4340;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:83:49,34:49:1760:34:1220:-85.1085,0,-133.455	0/0:139:139,0:139:4976:0:0:0,-41.8432,-447.9	0/0:470:469,1:469:16750:1:36:0,-137.891,-1502.79	0/0:514:512,2:512:18325:2:72:0,-148.178,-1621.9	0/1:160:71,89:71:2552:89:3176:-237.898,0,-181.275	0/1:117:52,65:52:1853:65:2332:-174.919,0,-131.827	0/0:243:243,0:243:8696:0:0:0,-73.1503,-773.543	0/0:413:411,2:411:14737:2:72:0,-117.494,-1317.57	0/1:210:109,101:109:3916:101:3616:-262.425,0,-289.264	0/0:183:182,1:182:6528:1:36:0,-51.4912,-573.998	0/1:74:37,37:37:1317:37:1328:-95.5235,0,-96.1877	0/1:134:58,76:58:2080:76:2728:-205.398,0,-146.998	0/1:133:55,78:55:1950:78:2785:-210.04,0,-135.686	0/0:98:98,0:98:3520:0:0:0,-29.5009,-316.579	0/1:81:44,37:44:1584:37:1324:-92.1655,0,-117.054	0/1:86:43,43:43:1525:43:1544:-113.347,0,-111.624	0/0:65:65,0:65:2309:0:0:0,-19.5669,-207.357	0/0:56:55,1:55:1980:1:36:0,-13.2645,-174.881	0/0:55:54,1:54:1944:1:36:0,-12.9635,-171.502	0/1:439:225,214:225:8064:214:7650:-524.256,0,-583.568	0/1:278:127,151:127:4528:151:5396:-401.989,0,-323.854	0/1:294:96,198:96:3444:198:7092:-521.756,0,-216.941	0/1:122:63,59:63:2264:59:2101:-140.553,0,-164.033	0/1:215:105,110:105:3757:110:3933:-289.437,0,-273.59	0/0:123:122,1:122:4353:1:36:0,-33.4284,-388.305	0/1:572:334,238:334:11934:238:8509:-556.359,0,-877.702	0/1:417:279,138:279:9990:138:4925:-317.866,0,-773.186	0/1:40:15,25:15:540:25:900:-69.255,0,-36.8953	0/0:585:582,3:582:20812:3:108:0,-166.027,-1848.13	0/0:323:322,1:322:11509:1:36:0,-93.637,-1030.52	0/0:184:181,3:181:6465:3:104:0,-45.6867,-564.85	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.448	0/0:39:38,1:38:1364:1:36:0,-8.14449,-119.435	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5408	0/1:21:12,9:12:420:9:324:-23.1842,0,-31.8124	0/0:31:31,0:31:1108:0:0:0,-9.33193,-99.986	0/1:203:90,113:90:3221:113:4052:-292.434,0,-224.496	0/0:299:299,0:299:10713:0:0:0,-90.008,-963.68	0/1:75:43,32:43:1536:32:1144:-80.6877,0,-115.766	0/1:7:5,2:5:180:2:72:-4.72951,0,-14.2129	0/1:360:166,194:166:5948:194:6898:-512.513,0,-426.928	0/1:39:13,26:13:468:26:936:-72.8146,0,-30.7195	0/1:337:186,151:186:6656:151:5375:-382.432,0,-497.453	0/1:75:34,41:34:1224:41:1472:-105.876,0,-87.4334	0/0:87:86,1:86:3039:1:32:0,-22.9907,-267.974	0/0:236:236,0:236:8444:0:0:0,-71.0431,-752.157	0/0:286:286,0:286:10226:0:0:0,-86.0946,-920.119	0/0:451:450,1:450:16082:1:36:0,-132.167,-1418.87	0/1:195:90,105:90:3228:105:3756:-261.903,0,-227.83	0/1:323:178,145:178:6380:145:5204:-352.855,0,-469.289	0/0:293:288,5:288:10301:5:180:0,-71.6497,-899.275	0/1:27:24,3:24:856:3:104:-1.57274,0,-66.576	0/0:278:277,1:277:9928:1:36:0,-80.0932,-889.68	0/1:161:77,84:77:2752:84:3012:-214.867,0,-197.81	0/1:21:14,7:14:500:7:252:-16.7073,0,-39.0145	0/1:231:112,119:112:4001:119:4268:-314.747,0,-290.667	0/0:55:55,0:55:1953:0:0:0,-16.5566,-173.113	0/1:14:8,6:8:284:6:216:-14.7532,0,-21.428	0/0:35:35,0:35:1222:0:0:0,-10.536,-107.548	0/0:174:174,0:174:6224:0:0:0,-52.3792,-560.02	0/1:138:54,84:54:1940:84:3008:-219.662,0,-131.751	0/0:9:9,0:9:324:0:0:0,-2.70927,-28.756	0/0:334:332,2:332:11876:2:72:0,-93.9916,-1048.51	0/1:457:220,237:220:7885:237:8473:-595.06,0,-563.314	0/1:167:105,62:105:3742:62:2232:-150.87,0,-286.598	0/0:160:160,0:160:5725:0:0:0,-48.1648,-514.213	0/1:288:127,161:127:4544:161:5772:-411.459,0,-315.714	0/1:335:107,228:107:3821:228:8127:-594.042,0,-240.418	0/1:52:30,22:30:1076:22:792:-55.9521,0,-80.9659	0/1:142:62,80:62:2220:80:2860:-214.892,0,-157.318	0/1:81:39,42:39:1404:42:1497:-106.231,0,-100.099	0/1:43:21,22:21:748:22:788:-57.0064,0,-54.2175	0/1:248:156,92:156:5569:92:3288:-221.48,0,-426.092	0/1:161:94,67:94:3342:67:2377:-165.698,0,-252.435	0/1:338:167,171:167:5976:171:6128:-449.851,0,-434.57	0/0:285:285,0:285:10221:0:0:0,-85.7935,-909.038	0/0:466:465,1:465:16328:1:36:0,-136.682,-1464.73	0/1:197:107,90:107:3813:90:3232:-231.794,0,-283.759	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:228:221,7:221:7921:7:252:0,-45.6059,-689.8	0/1:285:158,127:158:5588:127:4527:-321.798,0,-416.424	0/1:547:214,333:214:7660:333:11921:-856.291,0,-515.08	0/1:115:61,54:61:2177:54:1936:-132.13,0,-157.999	0/0:87:87,0:87:3124:0:0:0,-26.1896,-280.136	0/1:75:31,44:31:1101:44:1584:-115.017,0,-75.8652	0/0:115:112,3:112:4012:3:108:0,-24.5461,-347.622	0/0:38:38,0:38:1356:0:0:0,-11.4391,-122.337	0/1:71:28,43:28:1004:43:1536:-117.152,0,-69.3012	0/0:82:82,0:82:2936:0:0:0,-24.6845,-264.419	0/0:71:69,2:69:2484:2:72:0,-14.5413,-216.887	0/1:128:64,64:64:2292:64:2292:-168.005,0,-167.526	0/1:78:21,57:21:756:57:2040:-155.322,0,-44.6565	0/0:285:283,2:283:10156:2:72:0,-78.9587,-892.711	0/0:121:119,2:119:4272:2:72:0,-29.5889,-373.33
chr09	250083	.	ATTCG	TTTCA,TTTCG	555801	PASS	AB=0.548825,0.446649;ABP=218.024,259.736;AC=135,53;AF=0.718085,0.281915;AN=188;AO=15888,4664;CIGAR=1X3M1X,1X4M;DP=20621;DPB=20628.4;DPRA=0,1.05444;EPP=34503.4,10130.8;EPPR=9.52472;GTI=3;LEN=5,1;MEANALT=2.34043,2.78462;MQM=59.535,59.9007;MQMR=54;NS=94;NUMALT=2;ODDS=4.21356;PAIRED=0,0;PAIREDR=0;PAO=15,14;PQA=460,424;PQR=0;PRO=0;QA=557516,166569;QR=85;RO=3;RPL=8512,2483;RPP=179.387,45.4732;RPPR=9.52472;RPR=7376,2181;RUN=1,1;SAF=8512,2483;SAP=179.387,45.4732;SAR=7376,2181;SRF=3;SRP=9.52472;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:89:0,45,44:0:0:45,44:1570,1584:-256.996,-129.464,-115.917,-127.887,0,-114.641	1/1:200:0,200,0:0:0:200,0:7011,0:-631.022,-60.206,0,-631.022,-60.206,-631.022	1/1:513:0,513,0:0:0:513,0:18002,0:-1619.21,-154.428,0,-1619.21,-154.428,-1619.21	1/1:541:0,537,3:0:0:537,3:18800,108:-1690.77,-161.653,0,-1681.96,-152.841,-1681.05	1/2:133:0,86,47:0:0:86,47:3035,1679:-384.055,-137.246,-111.357,-247.165,0,-233.016	1/2:119:0,64,54:0:0:64,54:2248,1931:-340.55,-157.588,-138.322,-183.094,0,-166.838	1/1:309:0,308,1:0:0:308,1:10770,36:-968.715,-92.7172,0,-965.778,-89.42,-965.477	1/1:577:0,574,1:0:0:574,1:20129,36:-1809.5,-172.791,0,-1806.56,-169.849,-1806.26	1/2:233:0,138,95:0:0:138,95:4790,3386:-665.573,-276.351,-234.809,-389.574,0,-360.976	1/1:245:0,245,0:0:0:245,0:8649,0:-778.097,-73.7524,0,-778.097,-73.7524,-778.097	1/2:111:0,66,44:0:0:66,44:2311,1580:-316.959,-128.974,-109.106,-188.067,0,-174.822	1/2:193:0,92,101:0:0:92,101:3208,3620:-556.343,-295.579,-267.884,-261.117,0,-230.713	1/2:166:0,80,86:0:0:80,86:2832,3075:-481.426,-250.797,-226.715,-230.984,0,-205.095	1/1:152:0,152,0:0:0:152,0:5311,0:-478.015,-45.7566,0,-478.015,-45.7566,-478.015	1/2:127:0,69,56:0:0:69,56:2424,1978:-358.363,-161.126,-140.355,-197.283,0,-180.425	1/2:122:0,73,48:0:0:73,48:2571,1716:-349.345,-140.062,-118.087,-209.434,0,-194.984	1/1:164:0,164,0:0:0:164,0:5803,0:-521.784,-49.3689,0,-521.784,-49.3689,-521.784	1/1:129:0,129,0:0:0:129,0:4547,0:-409.397,-38.8329,0,-409.397,-38.8329,-409.397	1/1:84:0,84,0:0:0:84,0:2953,0:-265.915,-25.2865,0,-265.915,-25.2865,-265.915	1/2:411:0,228,181:0:0:228,181:7989,6487:-1179,-529.006,-460.371,-649.932,0,-595.446	1/2:347:0,172,171:0:0:172,171:6020,6108:-987.684,-497.984,-446.207,-489.737,0,-438.261	1/2:378:0,146,230:0:0:146,230:5142,8212:-1088.15,-669.544,-625.594,-418.653,0,-349.416	1/2:122:0,65,57:0:0:65,57:2287,2052:-353.887,-167.793,-148.226,-186.451,0,-169.292	1/2:136:0,84,51:0:0:84,51:2966,1814:-389.413,-147.884,-122.598,-241.582,0,-226.23	1/1:148:0,148,0:0:0:148,0:5129,0:-461.586,-44.5524,0,-461.586,-44.5524,-461.586	1/2:536:0,326,208:0:0:326,208:11451,7456:-1539.75,-608.014,-509.878,-931.755,0,-869.141	1/2:486:0,340,145:0:0:340,145:11941,5175:-1393.44,-421.875,-319.525,-971.556,0,-927.906	1/2:62:0,22,39:0:0:22,39:784,1396:-177.744,-113.839,-107.217,-63.9023,0,-52.1621	1/1:772:0,770,0:0:0:770,0:27034,0:-2431.79,-231.793,0,-2431.79,-231.793,-2431.79	1/1:373:0,371,0:0:0:371,0:13015,0:-1170.06,-111.682,0,-1170.06,-111.682,-1170.06	1/1:204:0,198,6:0:0:198,6:6942,216:-624.416,-59.6039,0,-606.792,-41.6196,-604.985	1/1:18:0,18,0:0:0:18,0:642,0:-58.1102,-5.41854,0,-58.1102,-5.41854,-58.1102	1/1:49:0,49,0:0:0:49,0:1703,0:-153.524,-14.7505,0,-153.524,-14.7505,-153.524	1/2:9:0,8,1:0:0:8,1:268,36:-24.9765,-3.29724,-0.889005,-22.0363,0,-21.7353	1/2:27:0,13,14:0:0:13,14:459,504:-78.8587,-41.4837,-37.5703,-37.7313,0,-33.5169	1/1:36:0,36,0:0:0:36,0:1264,0:-114.018,-10.8371,0,-114.018,-10.8371,-114.018	1/2:334:0,183,149:0:0:183,149:6428,5309:-955.797,-432.711,-377.622,-523.096,0,-478.242	1/1:396:0,396,0:0:0:396,0:13964,0:-1256.28,-119.208,0,-1256.28,-119.208,-1256.28	1/2:106:0,68,37:0:0:68,37:2388,1316:-301.471,-107.244,-86.7744,-194.221,0,-183.083	1/2:11:0,3,7:0:0:3,7:108,252:-29.3971,-20.584,-19.6809,-8.83116,0,-6.72395	1/2:248:0,118,130:0:0:118,130:4136,4609:-712.298,-375.838,-340.317,-336.812,0,-297.678	1/2:63:0,34,29:0:0:34,29:1216,1040:-184.334,-85.1821,-74.9471,-99.5098,0,-90.7799	1/2:333:0,189,144:0:0:189,144:6609,5150:-957.555,-420.171,-363.277,-537.618,0,-494.27	1/2:105:0,65,40:0:0:65,40:2297,1432:-304.155,-117.119,-97.5518,-187.392,0,-175.351	1/1:132:0,132,0:0:0:132,0:4614,0:-415.208,-39.736,0,-415.208,-39.736,-415.208	1/1:251:0,250,1:0:0:250,1:8772,36:-789.01,-75.2575,0,-786.072,-71.9603,-785.771	1/1:341:0,340,0:0:0:340,0:12009,0:-1080.29,-102.35,0,-1080.29,-102.35,-1080.29	1/1:486:0,482,1:0:0:482,1:16849,36:-1514.56,-145.096,0,-1511.62,-142.142,-1511.32	1/2:216:0,108,107:0:0:108,107:3774,3836:-619.776,-312.867,-280.356,-306.905,0,-274.695	1/2:308:0,183,125:0:0:183,125:6455,4463:-889.48,-364.034,-308.946,-525.682,0,-488.053	1/1:384:0,383,0:0:0:383,0:13450,0:-1209.9,-115.294,0,-1209.9,-115.294,-1209.9	1/1:28:0,27,0:0:0:27,0:950,0:-85.4375,-8.12781,0,-85.4375,-8.12781,-85.4375	1/1:328:0,327,0:0:0:327,0:11490,0:-1033.49,-98.4368,0,-1033.49,-98.4368,-1033.49	1/2:154:0,68,86:0:0:68,86:2348,3047:-439.32,-248.57,-228.1,-191.099,0,-165.211	1/2:12:0,9,3:0:0:9,3:314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chr09	250122	.	A	G	155036	PASS	AB=0.544573;ABP=84.8943;AC=135;AF=0.718085;AN=188;AO=7355;CIGAR=1X;DP=9532;DPB=9532;DPRA=0;EPP=15948.1;EPPR=4699.92;GTI=3;LEN=1;MEANALT=1.06383;MQM=59.8113;MQMR=59.9871;NS=94;NUMALT=1;ODDS=1.04221;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=262922;QR=77879;RO=2171;RPL=7352;RPP=15948.1;RPPR=4699.92;RPR=3;RUN=1;SAF=0;SAP=15974.2;SAR=7355;SRF=0;SRP=4717.28;SRR=2171;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:21,10:21:743:10:360:-23.4124,0,-57.8614	1/1:145:0,145:0:0:145:5156:-464.182,-43.6494,0	1/1:112:0,112:0:0:112:4028:-362.699,-33.7154,0	1/1:218:1,217:1:27:217:7756:-695.338,-62.9248,0	0/1:71:23,48:23:828:48:1713:-133.081,0,-53.471	0/1:58:21,37:21:744:37:1324:-102.001,0,-49.8246	1/1:153:0,153:0:0:153:5467:-492.051,-46.0576,0	1/1:316:0,316:0:0:316:11290:-1015.97,-95.1255,0	0/1:116:49,67:49:1748:67:2367:-178.349,0,-122.683	1/1:144:0,144:0:0:144:5158:-464.217,-43.3483,0	0/1:45:15,30:15:536:30:1076:-83.6042,0,-35.0285	0/1:92:47,45:47:1692:45:1611:-117.584,0,-124.872	0/1:64:30,34:30:1072:34:1215:-90.3866,0,-77.5265	1/1:83:0,83:0:0:83:2972:-267.704,-24.9855,0	0/1:68:31,37:31:1116:37:1332:-99.71,0,-80.2817	0/1:48:16,32:16:576:32:1148:-89.1773,0,-37.7255	1/1:111:0,111:0:0:111:3971:-357.572,-33.4143,0	1/1:92:0,92:0:0:92:3283:-295.686,-27.6948,0	1/1:35:0,35:0:0:35:1256:-113.343,-10.5361,0	0/1:197:96,101:96:3447:101:3606:-265.436,0,-251.138	0/1:160:73,87:73:2620:87:3104:-231.404,0,-187.882	0/1:230:138,92:138:4960:92:3289:-226.984,0,-377.31	0/1:68:37,31:37:1324:31:1102:-79.0139,0,-98.9921	0/1:37:5,32:5:180:32:1139:-91.6789,0,-5.41395	1/1:71:0,71:0:0:71:2531:-228.035,-21.3731,0	0/1:278:104,174:104:3724:174:6203:-474.671,0,-251.448	0/1:182:69,112:69:2480:112:3986:-304.075,0,-168.607	0/1:35:23,12:23:828:12:432:-28.6851,0,-64.3081	1/1:305:0,305:0:0:305:10873:-978.44,-91.8142,0	1/1:170:0,170:0:0:170:6102:-549.268,-51.1751,0	1/1:93:4,89:4:144:89:3175:-272.656,-14.6822,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:5:1,4:1:36:4:138:-11.2544,0,-2.09312	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:188:79,108:79:2840:108:3863:-291.207,0,-199.185	1/1:227:0,227:0:0:227:8129:-731.612,-68.3338,0	0/1:45:17,28:17:612:28:1008:-77.4873,0,-41.8671	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:94:57,37:57:2044:37:1309:-89.8112,0,-155.935	0/1:32:9,23:9:320:23:828:-65.2112,0,-19.5094	0/1:139:69,70:69:2464:70:2504:-183.698,0,-180.171	0/1:49:18,31:18:648:31:1112:-85.6409,0,-43.9014	1/1:67:0,67:0:0:67:2385:-214.897,-20.169,0	1/1:73:1,71:1:36:71:2543:-225.519,-18.4357,0	1/1:195:0,195:0:0:195:6962:-626.641,-58.7009,0	1/1:235:0,235:0:0:235:8400:-755.961,-70.7421,0	0/1:123:68,55:68:2444:55:1950:-138.745,0,-183.188	0/1:124:48,76:48:1724:76:2719:-207.62,0,-118.118	1/1:190:0,190:0:0:190:6799:-611.956,-57.1957,0	1/1:10:0,10:0:0:10:352:-31.9937,-3.0103,0	1/1:138:0,137:0:0:137:4908:-441.485,-41.2411,0	0/1:39:32,7:32:1148:7:252:-11.2888,0,-91.8897	0/1:6:3,3:3:104:3:108:-8.26899,0,-7.89663	0/1:148:77,70:77:2764:70:2512:-181.708,0,-204.39	1/1:52:2,50:2:72:50:1800:-155.441,-8.81684,0	0/1:12:7,5:7:252:5:171:-12.1131,0,-19.4166	1/1:35:0,35:0:0:35:1248:-112.623,-10.5361,0	1/1:100:0,100:0:0:100:3574:-321.791,-30.103,0	0/1:89:33,56:33:1188:56:2012:-154.554,0,-80.4369	0/1:8:4,4:4:144:4:132:-9.79634,0,-10.9054	1/1:210:1,209:1:36:209:7453:-667.194,-59.618,0	0/1:227:79,148:79:2840:148:5292:-408.06,0,-187.504	0/1:40:18,22:18:648:22:788:-59.2036,0,-46.6107	1/1:125:0,125:0:0:125:4475:-402.91,-37.6288,0	0/1:111:57,54:57:2040:54:1936:-141.099,0,-150.458	0/1:95:66,29:66:2360:29:1036:-64.9537,0,-184.061	0/1:40:20,20:20:720:20:720:-53.086,0,-53.0876	0/1:75:30,45:30:1080:45:1599:-121.622,0,-74.936	0/1:56:14,42:14:504:42:1508:-119.155,0,-28.8404	0/1:23:7,16:7:252:16:576:-45.2489,0,-16.1053	0/1:121:73,48:73:2624:48:1702:-117.037,0,-199.982	0/1:83:35,48:35:1239:48:1720:-130.099,0,-86.8282	0/1:145:68,77:68:2432:77:2736:-202.83,0,-175.486	1/1:164:0,164:0:0:164:5874:-528.745,-49.3689,0	1/1:191:0,191:0:0:191:6810:-612.97,-57.4967,0	0/1:153:49,104:49:1764:104:3697:-286.873,0,-112.986	1/1:15:0,15:0:0:15:539:-48.8399,-4.51545,0	1/1:142:2,139:2:72:139:4973:-440.878,-35.9417,0	0/1:152:94,58:94:3380:58:2080:-141.712,0,-258.658	0/1:208:81,127:81:2912:127:4553:-347.308,0,-199.7	0/1:76:26,50:26:936:50:1800:-139.379,0,-61.6812	1/1:65:0,65:0:0:65:2331:-210.04,-19.567,0	0/1:82:25,57:25:900:57:2036:-158.815,0,-56.6366	1/1:138:1,137:1:36:137:4911:-438.523,-37.9439,0	1/1:46:0,46:0:0:46:1655:-149.236,-13.8474,0	0/1:52:22,30:22:788:30:1080:-81.8269,0,-55.5912	1/1:77:0,77:0:0:77:2761:-248.704,-23.1793,0	1/1:36:0,36:0:0:36:1296:-116.939,-10.8371,0	0/1:49:21,28:21:747:28:1006:-76.1036,0,-52.8038	0/1:58:41,17:41:1472:17:612:-37.9537,0,-115.316	1/1:72:0,72:0:0:72:2564:-230.984,-21.6742,0	1/1:107:1,106:1:36:106:3800:-338.451,-28.6119,0
chr09	284758	.	CTTTCTCTTTTTCA	CTTTTTCTTTTTCA,CTCTCTTTTTCA	247454	PASS	AB=0.504152,0.170365;ABP=7.12197,15570.1;AC=92,17;AF=0.489362,0.0904255;AN=188;AO=13841,2810;CIGAR=4M1X9M,1M2D11M;DP=27454;DPB=27047.5;DPRA=0,0;EPP=30058.4,6104.85;EPPR=22699.2;GTI=11;LEN=1,2;MEANALT=4.71277,5;MQM=59.986,59.7861;MQMR=59.9919;NS=94;NUMALT=2;ODDS=4.08686;PAIRED=0,0;PAIREDR=0;PAO=0.333333,0.333333;PQA=4.66667,4.66667;PQR=4.66667;PRO=0.333333;QA=495818,99628;QR=368910;RO=10456;RPL=0,0;RPP=30058.4,6104.85;RPPR=22699.2;RPR=13841,2810;RUN=1,1;SAF=13841,2810;SAP=30058.4,6104.85;SAR=0,0;SRF=10456;SRP=22707.9;SRR=0;TYPE=snp,del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:128:43,80,5:43:1510:80,5:2841,165:-218.57,0,-98.8349,-218.177,-109.581,-339.569	0/1:565:310,251,0:310:10988:251,0:8995,0:-640.318,0,-819.638,-733.638,-895.197,-1628.8	0/1:417:207,203,0:207:7295:203,0:7265,0:-530.127,0,-532.845,-592.44,-593.954,-1186.39	0/1:650:327,314,2:327:11561:314,2:11226,72:-816.899,0,-847.07,-909.46,-935.719,-1850.46	0/1:343:117,185,37:117:4117:185,37:6609,1316:-503.624,0,-279.458,-431.599,-227.903,-755.61	0/1:373:84,226,55:84:2950:226,55:8105,1942:-635.79,0,-172.068,-503.024,-82.0453,-726.566	0/1:297:137,153,0:137:4833:153,0:5480,0:-405.689,0,-347.496,-446.93,-393.554,-840.469	0/1:746:408,326,3:408:14336:326,3:11692,108:-830.83,0,-1068.73,-944.838,-1158.05,-2110.8	0/1:374:120,182,70:120:4237:182,70:6490,2496:-492.918,0,-290.254,-325.576,-141.575,-649.545	0/1:399:204,188,0:204:7172:188,0:6728,0:-487.252,0,-527.211,-548.662,-583.805,-1132.45	1/2:95:18,58,19:18:620:58,19:2079,676:-168.89,-4.74485,-37.6385,-119.217,0,-163.853	1/2:154:28,82,40:28:996:82,40:2944,1428:-266.967,-35.2439,-91.7293,-158.984,0,-228.112	1/2:162:35,88,37:35:1232:88,37:3164,1324:-255.267,-7.66869,-81.4714,-157.845,0,-247.001	0/1:143:67,73,0:67:2379:73,0:2611,0:-192.78,0,-171.913,-212.949,-193.888,-406.794	1/2:147:37,69,39:37:1325:69,39:2484,1400:-197.688,-6.14344,-93.4286,-94.6269,0,-190.943	0/1:109:34,47,26:34:1203:47,26:1669,915:-125.761,0,-83.8413,-61.5105,-23.5033,-151.671	0/1:159:74,81,0:74:2621:81,0:2900,0:-214.216,0,-189.12,-236.493,-213.503,-450	0/1:111:51,58,0:51:1799:58,0:2088,0:-155.018,0,-129.006,-170.37,-146.466,-316.84	0/1:53:28,24,0:28:992:24,0:864,0:-62.0692,0,-73.5812,-70.498,-80.806,-151.306	0/1:739:190,398,149:190:6721:398,149:14245,5232:-1104.45,0,-427.621,-735.859,-121.644,-1238.43	1/2:506:134,205,161:134:4733:205,161:7312,5700:-634.534,-78.8427,-402.578,-210.585,0,-547.564	0/1:374:68,243,60:68:2405:243,60:8704,2148:-689.373,0,-122.733,-534.682,-20.7209,-712.505	0/1:291:101,144,44:101:3546:144,44:5176,1568:-391.87,0,-245.25,-294.469,-160.791,-569.821	0/1:330:95,190,43:95:3356:190,43:6798,1502:-525.745,0,-216.118,-432.17,-151.14,-692.535	0/1:321:166,152,0:166:5869:152,0:5459,0:-395.364,0,-432.26,-445.335,-478.017,-923.339	0/1:931:259,523,132:259:9091:523,132:18745,4643:-1450.59,0,-582.435,-1150.66,-361.984,-1850.8	0/1:684:225,323,125:225:7922:323,125:11557,4468:-874.679,0,-547.705,-578.167,-280.692,-1185.48	1/2:82:19,40,23:19:665:40,23:1436,810:-123.255,-11.8331,-53.8958,-63.0418,0,-110.22	0/1:832:431,388,0:431:15229:388,0:13912,0:-1004.97,0,-1123.49,-1134.72,-1240.29,-2374.98	0/1:331:168,152,0:168:5908:152,0:5444,0:-393.402,0,-435.16,-443.975,-480.917,-924.889	0/1:353:150,198,1:150:5280:198,1:7093,36:-533.309,0,-370.23,-575.526,-426.896,-1005.06	0/1:8:5,3,0:5:175:3,0:100,0:-6.9222,0,-13.6853,-8.42735,-14.5884,-22.6762	0/1:14:10,4,0:10:358:4,0:144,0:-9.0992,0,-28.3485,-12.1095,-29.5526,-41.3028	0/2:19:5,1,13:5:179:1,13:36,468:-36.6813,-35.249,-49.5448,0,-11.658,-10.6824	1/2:12:3,4,5:3:108:4,5:144,176:-16.3579,-5.50779,-13.1189,-2.93742,0,-10.2445	0/1:8:4,4,0:4:142:4,0:144,0:-10.9054,0,-10.721,-12.1095,-11.9252,-23.6773	0/1:445:132,191,116:132:4676:191,116:6863,4148:-520.145,0,-323.419,-221.925,-42.9582,-567.921	0/1:721:381,331,0:381:13477:331,0:11868,0:-853.282,0,-998.045,-967.975,-1097.69,-2065.66	1/2:131:30,69,31:30:1057:69,31:2480,1103:-197.092,-3.79789,-69.0837,-116.271,0,-192.996	0/1:17:6,11,0:6:213:11,0:396,0:-30.8652,0,-14.3989,-32.6714,-17.7102,-50.0251	0/1:371:101,219,48:101:3565:219,48:7827,1720:-607.777,0,-224.381,-497.903,-150.027,-773.759	0/1:60:14,32,13:14:501:32,13:1152,468:-89.783,0,-31.2208,-55.8137,-2.66912,-92.7544	0/1:620:144,422,50:144:5083:422,50:15122,1745:-1189.96,0,-286.891,-1091.39,-272.002,-1490.26	0/1:396:108,199,87:108:3768:199,87:7144,3071:-550.244,0,-246.562,-333.188,-56.8963,-613.464	0/1:154:84,67,0:84:2957:67,0:2408,0:-171.174,0,-220.565,-196.46,-240.734,-437.185	0/1:260:130,129,0:130:4579:129,0:4605,0:-336.346,0,-334.015,-375.48,-372.848,-748.275	0/1:498:257,239,0:257:9017:239,0:8576,0:-622.192,0,-661.894,-699.556,-733.84,-1433.37	0/1:700:367,322,0:367:12878:322,0:11543,0:-830.973,0,-951.118,-941.451,-1048.05,-1989.5	0/1:333:85,201,45:85:3009:201,45:7212,1608:-562.68,0,-184.595,-457.161,-113.994,-688.717	0/1:398:119,182,92:119:4175:182,92:6532,3288:-496.993,0,-284.977,-264.728,-71.6736,-576.798	0/1:404:165,232,0:165:5810:232,0:8320,0:-628.99,0,-403.08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chr09	284791	.	GTTTTCGA	GTTTACGA,CTTTACGA	573549	PASS	AB=0.777794,0.208724;ABP=9299.86,10224.2;AC=138,50;AF=0.734043,0.265957;AN=188;AO=23981,2963;CIGAR=4M1X3M,1X3M1X3M;DP=27294;DPB=27294.8;DPRA=0,1.05633;EPP=52068.4,6428.4;EPPR=7.35324;GTI=10;LEN=1,8;MEANALT=4.55319,5.08197;MQM=59.9956,59.7762;MQMR=60;NS=94;NUMALT=2;ODDS=4031.75;PAIRED=0,0;PAIREDR=0;PAO=0.333333,12.3333;PQA=12,156;PQR=12;PRO=0.333333;QA=858734,103226;QR=62;RO=2;RPL=23980,2962;RPP=52068.4,6428.4;RPPR=7.35324;RPR=1,1;RUN=1,1;SAF=23981,2963;SAP=52077.1,6437.08;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:129:0,120,6:0:0:120,6:4308,205:-387.566,-36.1236,0,-371.089,-19.6215,-369.282	1/1:558:0,551,0:0:0:551,0:19746,0:-1776.36,-165.868,0,-1776.36,-165.868,-1776.36	1/1:413:1,404,0:1:26:404,0:14474,0:-1299.78,-119.581,0,-1300.08,-121.616,-1302.12	1/1:637:0,630,1:0:0:630,1:22522,36:-2026.07,-189.649,0,-2023.13,-186.705,-2022.83	1/2:335:0,295,37:0:0:295,37:10540,1313:-966.382,-107.023,-18.2193,-859.403,0,-848.265	1/2:373:1,311,57:1:36:311,57:11121,1971:-1063.78,-157.267,-66.5847,-903.933,0,-889.712	1/1:294:0,291,0:0:0:291,0:10412,0:-936.701,-87.5997,0,-936.701,-87.5997,-936.701	1/1:739:0,724,3:0:0:724,3:25926,94:-2332.32,-217.946,0,-2324.76,-210.384,-2323.86	1/2:375:0,299,75:0:0:299,75:10686,2657:-1087.87,-216.588,-126.58,-871.426,0,-848.849	1/1:393:0,387,0:0:0:387,0:13850,0:-1245.95,-116.499,0,-1245.95,-116.499,-1245.95	1/2:96:0,72,20:0:0:72,20:2561,686:-264.5,-55.7699,-34.0958,-208.807,0,-202.786	1/2:155:0,112,42:0:0:112,42:4024,1447:-445.785,-117.501,-83.7853,-328.331,0,-315.688	1/2:162:0,122,37:0:0:122,37:4359,1291:-460.429,-105.018,-68.2927,-355.454,0,-344.316	1/1:144:0,144,0:0:0:144,0:5172,0:-465.618,-43.3483,0,-465.618,-43.3483,-465.618	1/2:150:0,107,42:0:0:107,42:3836,1453:-431.002,-118.125,-85.9147,-312.935,0,-300.292	1/2:110:0,79,27:0:0:79,27:2832,933:-306.865,-75.8707,-52.0893,-231.06,0,-222.933	1/1:158:0,157,1:0:0:157,1:5616,30:-505.262,-47.2617,0,-502.864,-44.5632,-502.563	1/1:112:0,110,0:0:0:110,0:3944,0:-354.846,-33.1133,0,-354.846,-33.1133,-354.846	1/1:51:0,51,0:0:0:51,0:1828,0:-164.801,-15.3525,0,-164.801,-15.3525,-164.801	1/2:738:0,577,157:0:0:577,157:20611,5477:-2125.91,-445.473,-271.778,-1680.48,0,-1633.22	1/2:512:0,337,169:0:0:337,169:12069,5874:-1461.82,-477.559,-376.112,-984.27,0,-933.396	1/2:367:0,304,58:0:0:304,58:10860,2050:-1052.42,-166.986,-75.4725,-885.465,0,-868.005	1/2:280:0,232,44:0:0:232,44:8305,1539:-802.464,-125.196,-55.3567,-677.295,0,-664.049	1/2:331:0,281,47:0:0:281,47:10089,1635:-955.968,-132.973,-48.3832,-823.032,0,-808.884	1/1:318:0,311,0:0:0:311,0:11154,0:-1003.49,-93.6203,0,-1003.49,-93.6203,-1003.49	1/2:927:0,769,140:0:0:769,140:27527,4897:-2643.23,-398.445,-166.953,-2244.84,0,-2202.69	1/2:695:0,550,136:0:0:550,136:19747,4772:-1999.19,-388.36,-222.793,-1610.86,0,-1569.92	1/2:82:0,58,23:0:0:58,23:2080,815:-236.162,-66.5033,-49.0436,-169.769,0,-162.845	1/1:820:0,807,0:0:0:807,0:28915,0:-2601.2,-242.931,0,-2601.2,-242.931,-2601.2	1/1:324:0,319,0:0:0:319,0:11421,0:-1027.44,-96.0286,0,-1027.44,-96.0286,-1027.44	1/1:353:0,345,1:0:0:345,1:12361,36:-1112.05,-103.855,0,-1109.11,-100.906,-1108.81	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:13:0,12,0:0:0:12,0:427,0:-38.4086,-3.61236,0,-38.4086,-3.61236,-38.4086	1/2:19:0,6,13:0:0:6,13:212,451:-54.2742,-37.0067,-35.2005,-17.6186,0,-13.7052	1/2:12:0,7,5:0:0:7,5:252,171:-34.7935,-14.2211,-12.1139,-20.9217,0,-19.4166	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:448:0,322,121:0:0:322,121:11560,4283:-1291.94,-348.958,-252.026,-943.068,0,-906.643	1/1:711:0,699,0:0:0:699,0:25043,0:-2252.85,-210.42,0,-2252.85,-210.42,-2252.85	1/2:130:0,96,34:0:0:96,34:3429,1181:-375.859,-96.2851,-67.3862,-279.923,0,-269.688	1/1:17:0,17,0:0:0:17,0:612,0:-55.4134,-5.11751,0,-55.4134,-5.11751,-55.4134	1/2:364:0,308,51:0:0:308,51:11007,1796:-1043.72,-146.268,-53.5507,-897.508,0,-882.156	1/2:61:0,47,11:0:0:47,11:1688,390:-169.477,-31.774,-17.6256,-137.705,0,-134.394	1/1:627:0,567,51:0:0:567,51:20316,1751:-1827.46,-170.684,0,-1685.29,-28.4993,-1669.93	1/2:388:0,292,95:0:0:292,95:10414,3218:-1109.48,-260.541,-172.64,-849.009,0,-820.411	1/1:149:0,148,1:0:0:148,1:5311,21:-478.014,-44.5524,0,-476.426,-42.8585,-476.125	1/1:258:0,254,0:0:0:254,0:9059,0:-815.017,-76.4616,0,-815.017,-76.4616,-815.017	1/1:494:0,488,0:0:0:488,0:17422,0:-1567.29,-146.903,0,-1567.29,-146.903,-1567.29	1/1:688:0,680,0:0:0:680,0:24392,0:-2194.35,-204.7,0,-2194.35,-204.7,-2194.35	1/2:331:0,277,48:0:0:277,48:9903,1679:-944.083,-136.613,-53.2275,-807.489,0,-793.04	1/2:403:0,302,97:0:0:302,97:10808,3377:-1156.03,-274.671,-183.76,-881.436,0,-852.237	1/1:400:0,398,0:0:0:398,0:14233,0:-1280.43,-119.81,0,-1280.43,-119.81,-1280.43	1/1:15:0,15,0:0:0:15,0:540,0:-48.9365,-4.51545,0,-48.9365,-4.51545,-48.9365	1/1:432:0,426,1:0:0:426,1:15288,35:-1375.32,-128.239,0,-1372.47,-125.383,-1372.17	1/2:68:0,53,12:0:0:53,12:1904,430:-190.447,-35.1135,-19.1589,-155.377,0,-151.765	1/2:7:0,5,2:0:0:5,2:180,66:-20.3744,-5.66589,-4.16074,-15.0469,0,-14.4449	1/2:408:0,315,86:0:0:315,86:11293,3022:-1167.09,-246.014,-151.19,-921.127,0,-895.238	1/1:201:0,191,1:0:0:191,1:6819,36:-613.466,-57.4967,0,-610.529,-54.5539,-610.228	1/2:9:0,6,3:0:0:6,3:216,90:-25.1592,-7.49479,-5.68861,-17.9843,0,-17.0812	1/1:42:0,42,0:0:0:42,0:1508,0:-136.015,-12.6433,0,-136.015,-12.6433,-136.015	1/1:203:0,202,0:0:0:202,0:7243,0:-651.7,-60.8081,0,-651.7,-60.8081,-651.7	1/2:208:0,154,51:0:0:154,51:5524,1740:-591.805,-141.223,-94.8645,-450.638,0,-435.285	1/2:13:0,6,7:0:0:6,7:216,246:-38.0033,-20.3749,-18.5687,-17.9843,0,-15.8771	1/1:642:0,638,1:0:0:638,1:22879,25:-2058.22,-192.057,0,-2056.27,-190.123,-2055.97	1/2:600:0,469,123:0:0:469,123:16797,4265:-1716.59,-346.742,-205.559,-1369.93,0,-1332.9	1/2:181:0,134,44:0:0:134,44:4793,1536:-515.841,-125.002,-84.6639,-390.908,0,-377.663	1/1:322:0,318,0:0:0:318,0:11392,0:-1024.81,-95.7275,0,-1024.81,-95.7275,-1024.81	1/2:663:0,513,132:0:0:513,132:18337,4548:-1864.59,-369.441,-215.012,-1495.18,0,-1455.44	1/2:262:0,196,64:0:0:196,64:7044,2225:-755.647,-180.98,-121.978,-574.755,0,-555.489	1/2:43:0,26,16:0:0:26,16:924,551:-120.04,-44.7382,-36.9114,-75.2912,0,-70.4747	1/2:238:0,169,68:0:0:169,68:6038,2383:-686.192,-193.897,-143.023,-492.288,0,-471.818	1/2:206:0,163,39:0:0:163,39:5856,1381:-590.257,-112.528,-63.4602,-477.764,0,-466.024	1/2:39:0,32,5:0:0:32,5:1152,180:-108.755,-14.7406,-5.1076,-94.0678,0,-92.5627	1/2:221:0,182,36:0:0:182,36:6516,1233:-631.481,-100.099,-45.3118,-531.399,0,-520.561	1/2:169:0,125,43:0:0:125,43:4469,1471:-483.8,-119.394,-81.7656,-364.499,0,-351.555	1/2:335:0,281,47:0:0:281,47:10055,1639:-953.318,-133.366,-48.7767,-820.023,0,-805.875	1/1:596:0,593,0:0:0:593,0:21273,0:-1913.8,-178.511,0,-1913.8,-178.511,-1913.8	1/1:417:0,413,0:0:0:413,0:14805,0:-1331.87,-124.325,0,-1331.87,-124.325,-1331.87	1/2:520:0,426,88:0:0:426,88:15191,3114:-1491.96,-253.649,-125.411,-1238.37,0,-1211.88	1/1:26:0,26,0:0:0:26,0:932,0:-84.1989,-7.82678,0,-84.1989,-7.82678,-84.1989	1/1:392:0,389,0:0:0:389,0:13973,0:-1257.08,-117.101,0,-1257.08,-117.101,-1257.08	1/2:279:0,215,61:0:0:215,61:7669,2147:-799.957,-174.786,-110.065,-625.225,0,-606.863	1/2:561:0,455,102:0:0:455,102:16314,3554:-1619.71,-289.101,-152.133,-1330.69,0,-1299.99	1/2:249:0,182,64:0:0:182,64:6504,2232:-711.873,-181.567,-126.78,-530.348,0,-511.082	1/1:113:0,112,1:0:0:112,1:4020,36:-361.628,-33.7154,0,-358.69,-30.4181,-358.389	1/2:231:0,169,58:0:0:169,58:6072,2046:-662.07,-166.712,-115.837,-495.474,0,-478.014	1/1:319:0,317,0:0:0:317,0:11375,0:-1023.26,-95.4265,0,-1023.26,-95.4265,-1023.26	1/1:98:0,96,0:0:0:96,0:3419,0:-307.663,-28.8989,0,-307.663,-28.8989,-307.663	1/2:176:0,131,41:0:0:131,41:4692,1419:-497.998,-115.339,-75.904,-382.696,0,-370.354	1/1:137:0,137,0:0:0:137,0:4912,0:-442.222,-41.2411,0,-442.222,-41.2411,-442.222	1/1:54:0,54,0:0:0:54,0:1929,0:-173.885,-16.2556,0,-173.885,-16.2556,-173.885	1/2:107:0,65,40:0:0:65,40:2320,1394:-302.587,-113.443,-93.8758,-189.226,0,-177.185	1/2:233:0,154,77:0:0:154,77:5528,2653:-666.439,-215.503,-169.145,-450.954,0,-427.775	1/1:375:0,371,0:0:0:371,0:13282,0:-1194.88,-111.682,0,-1194.88,-111.682,-1194.88	1/1:224:0,223,0:0:0:223,0:7981,0:-718.1,-67.1297,0,-718.1,-67.1297,-718.1
chr09	342137	.	G	A	168121	PASS	AB=0.493873;ABP=5.13919;AC=133;AF=0.707447;AN=188;AO=8194;CIGAR=1X;DP=11516;DPB=11516;DPRA=31.2717;EPP=17752.7;EPPR=7205.79;GTI=0;LEN=1;MEANALT=1.01087;MQM=59.4849;MQMR=59.9157;NS=94;NUMALT=1;ODDS=7.65628;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=291688;QR=118226;RO=3321;RPL=6;RPP=17744;RPPR=7205.79;RPR=8188;RUN=1;SAF=1;SAP=17787.4;SAR=8193;SRF=0;SRP=7214.47;SRR=3321;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:42:29,13:29:1040:13:468:-29.8164,0,-80.7132	1/1:162:0,162:0:0:162:5755:-517.168,-48.7669,0	1/1:287:0,287:0:0:287:10179:-913.59,-86.3956,0	1/1:361:1,360:1:27:360:12764:-1144.49,-105.972,0	0/1:136:78,58:78:2795:58:2073:-145.86,0,-210.847	0/1:67:29,38:29:1021:38:1359:-102.44,0,-72.0312	1/1:131:0,131:0:0:131:4683:-421.58,-39.4349,0	1/1:215:0,215:0:0:215:7692:-692.119,-64.7215,0	0/1:68:33,35:33:1176:35:1247:-91.885,0,-85.6777	1/1:119:0,119:0:0:119:4268:-384.256,-35.8226,0	0/1:51:24,27:24:856:27:945:-69.8872,0,-62.0086	0/1:67:32,35:32:1139:35:1240:-91.675,0,-82.6494	0/1:61:39,22:39:1388:22:770:-51.2202,0,-106.856	1/1:54:0,54:0:0:54:1914:-172.467,-16.2556,0	0/1:58:33,25:33:1180:25:896:-63.5006,0,-89.0483	0/1:48:17,31:17:608:31:1112:-85.9419,0,-40.6026	1/1:63:0,63:0:0:63:2247:-202.383,-18.9649,0	1/1:55:0,55:0:0:55:1955:-176.186,-16.5567,0	1/1:47:0,47:0:0:47:1684:-151.775,-14.1484,0	0/1:458:238,220:238:8489:220:7833:-567.063,0,-626.128	0/1:160:80,80:80:2814:80:2849:-208.419,0,-205.331	0/1:209:131,78:131:4655:78:2783:-187.787,0,-356.197	0/1:74:25,49:25:900:49:1723:-133.048,0,-59.0272	0/1:165:85,80:85:3000:80:2797:-202.248,0,-220.559	1/1:108:0,108:0:0:108:3872:-348.64,-32.5112,0	0/1:384:185,199:185:6627:199:7135:-526.483,0,-480.717	0/1:278:138,140:138:4903:140:5011:-367.113,0,-357.705	0/1:44:23,21:23:816:21:752:-54.7385,0,-60.5164	0/1:415:175,240:175:6258:240:8512:-641.098,0,-438.385	1/1:115:0,115:0:0:115:4098:-368.854,-34.6185,0	1/1:110:1,109:1:36:109:3870:-344.882,-29.515,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	1/1:23:0,23:0:0:23:815:-73.6483,-6.92369,0	1/1:11:0,11:0:0:11:383:-34.8029,-3.31133,0	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	1/1:21:0,21:0:0:21:738:-66.7409,-6.32163,0	0/1:204:103,100:103:3661:100:3554:-258.41,0,-268.209	1/1:206:2,204:2:63:204:7293:-650.332,-56.029,0	0/1:48:25,23:25:891:23:828:-60.3947,0,-66.0593	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:193:103,90:103:3691:90:3232:-232.935,0,-274.29	0/1:26:13,13:13:459:13:468:-34.6247,0,-33.8173	0/1:238:132,106:132:4728:106:3787:-269.292,0,-354.034	0/1:87:46,41:46:1652:41:1440:-103.676,0,-122.779	1/1:68:0,68:0:0:68:2380:-214.448,-20.47,0	1/1:121:0,121:0:0:121:4273:-384.746,-36.4246,0	1/1:160:0,160:0:0:160:5670:-510.251,-48.1648,0	1/1:248:1,247:1:36:247:8817:-789.477,-71.0572,0	0/1:144:54,90:54:1928:90:3220:-246.542,0,-130.448	0/1:233:137,96:137:4862:96:3409:-236.879,0,-367.594	1/1:217:0,217:0:0:217:7745:-696.852,-65.3235,0	1/1:10:0,10:0:0:10:360:-32.7281,-3.0103,0	1/1:203:0,203:0:0:203:7225:-650.068,-61.1091,0	0/1:34:21,13:21:731:13:468:-32.2082,0,-55.8754	0/1:28:11,17:11:392:17:612:-46.9846,0,-27.1912	0/1:182:71,111:71:2539:111:3933:-299.257,0,-173.968	1/1:57:2,55:2:72:55:1951:-168.989,-10.322,0	0/1:16:9,7:9:324:7:248:-17.8477,0,-24.6894	1/1:15:0,15:0:0:15:532:-48.2131,-4.51545,0	1/1:54:0,54:0:0:54:1921:-173.109,-16.2556,0	0/1:107:57,50:57:2035:50:1775:-127.791,0,-151.211	0/1:24:16,8:16:572:8:288:-19.0427,0,-44.5825	1/1:302:1,301:1:36:301:10689:-958.231,-87.3128,0	0/1:222:118,104:118:4156:104:3718:-267.902,0,-307.393	0/1:70:34,36:34:1207:36:1273:-93.7959,0,-87.8632	1/1:165:0,165:0:0:165:5894:-530.502,-49.67,0	0/1:213:111,102:111:3950:102:3663:-265.733,0,-291.568	0/1:87:52,35:52:1827:35:1260:-87.5017,0,-138.518	0/1:12:4,8:4:140:8:288:-22.655,0,-9.33222	0/1:92:49,43:49:1736:43:1527:-109.967,0,-128.827	0/1:79:38,41:38:1329:41:1472:-108.96,0,-96.1261	0/1:21:12,9:12:432:9:324:-23.1842,0,-32.8996	0/1:100:37,63:37:1324:63:2252:-172.748,0,-89.3363	0/1:98:45,53:45:1607:53:1892:-140.582,0,-115.383	0/1:94:49,45:49:1760:45:1610:-116.871,0,-130.387	1/1:291:0,291:0:0:291:10325:-927.415,-87.5997,0	1/1:149:0,149:0:0:149:5298:-476.884,-44.8535,0	0/1:173:75,98:75:2670:98:3498:-262.624,0,-188.465	1/1:18:0,18:0:0:18:644:-58.2759,-5.41854,0	1/1:174:1,173:1:36:173:6207:-554.996,-48.7809,0	0/1:226:121,105:121:4318:105:3736:-268.357,0,-320.305	0/1:319:166,153:166:5917:153:5453:-394.821,0,-436.603	0/1:93:50,43:50:1762:43:1518:-108.904,0,-130.864	1/1:53:0,53:0:0:53:1874:-168.928,-15.9546,0	0/1:83:37,46:37:1316:46:1644:-123.022,0,-93.7563	1/1:157:0,157:0:0:157:5523:-497.144,-47.2617,0	1/1:51:0,51:0:0:51:1820:-164.01,-15.3525,0	0/1:76:44,32:44:1572:32:1148:-80.6214,0,-118.465	1/1:65:0,65:0:0:65:2298:-207.076,-19.567,0	1/1:17:0,17:0:0:17:600:-54.3292,-5.11751,0	0/1:52:30,22:30:1043:22:773:-54.2253,0,-78.5225	0/1:69:39,30:39:1400:30:1065:-75.3749,0,-105.528	1/1:171:1,170:1:36:170:6083:-543.742,-47.8779,0	1/1:116:0,116:0:0:116:4112:-370.197,-34.9195,0
chr09	431701	.	T	C	194715	PASS	AB=0.453385;ABP=153.833;AC=135;AF=0.718085;AN=188;AO=9529;CIGAR=1X;DP=13913;DPB=13913;DPRA=0;EPP=20695;EPPR=9392.85;GTI=1;LEN=1;MEANALT=1.04255;MQM=58.9945;MQMR=35.6495;NS=94;NUMALT=1;ODDS=0.787184;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=340436;QR=156965;RO=4380;RPL=0;RPP=20695;RPPR=9392.85;RPR=9529;RUN=1;SAF=9529;SAP=20695;SAR=0;SRF=4380;SRP=9514.06;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:12,45:12:432:45:1620:-128.928,0,-14.063	1/1:258:0,257:0:0:257:9186:-825.875,-77.3647,0	1/1:413:0,413:0:0:413:14781:-1328.88,-124.325,0	1/1:395:1,394:1:36:394:14089:-1264.1,-116.44,0	0/1:130:74,56:74:2656:56:2008:-141.833,0,-171.436	0/1:49:31,18:31:1112:18:640:-43.1066,0,-71.7867	1/1:151:0,151:0:0:151:5408:-486.644,-45.4555,0	1/1:259:1,258:1:36:258:9209:-823.913,-74.8431,0	0/1:90:47,43:47:1684:43:1540:-111.607,0,-102.838	1/1:82:1,81:1:36:81:2896:-255.922,-21.0862,0	0/1:80:34,46:34:1206:46:1643:-122.522,0,-75.0949	0/1:102:58,44:58:2062:44:1576:-111.244,0,-129.019	0/1:79:42,37:42:1512:37:1323:-95.4739,0,-91.6681	1/1:101:0,101:0:0:101:3620:-325.886,-30.404,0	0/1:96:44,52:44:1584:52:1864:-139.083,0,-102.736	0/1:97:44,53:44:1575:53:1877:-139.739,0,-95.8449	1/1:127:2,125:2:72:125:4480:-396.39,-31.3941,0	1/1:85:0,84:0:0:84:2999:-269.333,-25.2865,0	1/1:63:0,63:0:0:63:2251:-202.557,-18.9649,0	0/1:487:294,193:294:10556:193:6916:-475.606,0,-724.264	0/1:176:89,87:89:3191:87:3110:-226.682,0,-203.604	0/1:207:156,51:156:5581:51:1828:-102.479,0,-413.674	0/1:136:64,72:64:2289:72:2580:-191.4,0,-147.73	0/1:146:74,72:74:2646:72:2584:-188.654,0,-167.65	1/1:56:0,56:0:0:56:2007:-180.698,-16.8577,0	0/1:374:211,163:211:7559:163:5809:-409.699,0,-524.009	0/1:305:164,141:164:5892:141:5047:-362.243,0,-380.031	0/1:44:32,12:32:1152:12:428:-25.5909,0,-77.9609	0/1:583:363,220:363:12999:220:7839:-528.184,0,-923.273	1/1:196:0,196:0:0:196:7002:-629.446,-59.0019,0	1/1:174:1,173:1:36:173:6204:-554.651,-49.0331,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:28:0,28:0:0:28:1004:-90.6534,-8.42884,0	1/1:12:0,12:0:0:12:432:-39.2208,-3.61236,0	0/1:9:7,2:7:252:2:72:-4.12745,0,-17.282	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:259:121,138:121:4341:138:4932:-363.971,0,-288.895	1/1:246:1,245:1:36:245:8744:-783.89,-71.7745,0	0/1:84:48,36:48:1724:36:1288:-90.8967,0,-109.25	0/1:15:5,10:5:180:10:360:-28.2289,0,-9.86713	0/1:299:147,152:147:5279:152:5443:-399.586,0,-330.229	0/1:68:40,28:40:1431:28:1008:-70.5053,0,-92.4804	0/1:268:131,137:131:4712:137:4872:-357.202,0,-300.858	0/1:117:57,60:57:2037:60:2148:-158.005,0,-134.402	1/1:88:0,88:0:0:88:3147:-283.158,-26.4906,0	1/1:53:1,52:1:36:52:1868:-164.801,-12.3563,0	1/1:245:0,244:0:0:244:8677:-780.088,-73.4513,0	1/1:133:0,133:0:0:133:4732:-425.816,-40.037,0	0/1:139:74,65:74:2633:65:2328:-167.5,0,-175.227	0/1:284:126,158:126:4528:158:5620:-419.435,0,-289.753	1/1:188:0,188:0:0:188:6734:-605.721,-56.5936,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:244:0,244:0:0:244:8712:-783.745,-73.4513,0	0/1:64:20,44:20:720:44:1580:-123.226,0,-41.9999	0/1:24:19,5:19:684:5:176:-8.96014,0,-46.2432	0/1:339:219,120:219:7837:120:4261:-281.148,0,-523.398	1/1:70:0,70:0:0:70:2495:-224.688,-21.0721,0	0/1:9:8,1:8:288:1:36:-0.889005,0,-22.2123	1/1:12:0,12:0:0:12:432:-39.1965,-3.61236,0	1/1:85:0,85:0:0:85:3033:-272.888,-25.5876,0	0/1:141:68,73:68:2422:73:2620:-193.34,0,-156.823	0/1:18:11,7:11:387:7:248:-17.2457,0,-27.418	1/1:298:0,297:0:0:297:10575:-949.988,-89.4059,0	0/1:262:160,102:160:5742:102:3645:-248.651,0,-395.521	0/1:84:45,39:45:1620:39:1396:-100.565,0,-104.947	1/1:208:2,206:2:72:206:7338:-653.545,-56.2566,0	0/1:243:154,89:154:5517:89:3176:-212.618,0,-385.751	0/1:175:148,27:148:5316:27:968:-34.7434,0,-384.663	0/1:46:22,24:22:792:24:851:-63.0396,0,-49.1234	0/1:95:43,52:43:1535:52:1868:-139.693,0,-85.29	0/1:104:52,52:52:1851:52:1863:-136.616,0,-126.996	0/1:23:13,10:13:468:10:352:-25.0921,0,-32.5608	0/1:104:60,44:60:2152:44:1563:-109.602,0,-133.34	0/1:77:39,38:39:1400:38:1355:-98.7475,0,-86.3547	0/1:179:65,114:65:2336:114:4064:-311.456,0,-133.76	1/1:269:0,269:0:0:269:9624:-865.504,-80.9771,0	1/1:235:0,235:0:0:235:8357:-750.747,-70.7421,0	0/1:125:58,67:58:2066:67:2408:-179.129,0,-118.929	1/1:10:0,10:0:0:10:360:-32.7157,-3.0103,0	1/1:238:0,238:0:0:238:8503:-763.687,-71.6451,0	0/1:262:139,123:139:4987:123:4387:-315.756,0,-307.652	0/1:300:164,136:164:5871:136:4868:-347.74,0,-395.372	0/1:109:50,59:50:1800:59:2107:-156.964,0,-116.726	1/1:112:0,112:0:0:112:4003:-359.86,-33.7154,0	0/1:132:50,82:50:1775:82:2924:-223.496,0,-106.876	1/1:167:2,165:2:72:165:5903:-524.645,-43.9143,0	1/1:60:0,60:0:0:60:2152:-193.79,-18.0618,0	0/1:99:50,49:50:1774:49:1751:-128.003,0,-105.439	1/1:97:0,97:0:0:97:3458:-311.225,-29.1999,0	1/1:79:0,79:0:0:79:2832:-254.976,-23.7814,0	0/1:95:50,45:50:1796:45:1598:-115.471,0,-116.089	0/1:102:72,30:72:2592:30:1065:-65.4091,0,-184.916	1/1:193:0,193:0:0:193:6894:-619.922,-58.0988,0	1/1:153:0,153:0:0:153:5462:-491.12,-46.0576,0
chr09	679226	.	AATATAT	GATATGA,GATGTGA	81600.6	PASS	AB=0.457093,0.540138;ABP=49.2228,43.4523;AC=132,56;AF=0.702128,0.297872;AN=188;AO=2880,1565;CIGAR=1X4M2X,1X2M1X1M2X;DP=4461;DPB=4461.43;DPRA=0,1.33561;EPP=6256.85,3401.36;EPPR=5.18177;GTI=1;LEN=7,7;MEANALT=1.7766,2.11864;MQM=40.0858,34.1955;MQMR=60;NS=94;NUMALT=2;ODDS=0.308075;PAIRED=0,0;PAIREDR=0;PAO=1,1;PQA=34,34;PQR=0;PRO=1;QA=100326,54994;QR=36;RO=1;RPL=2880,1565;RPP=6256.85,3401.36;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=2880,1565;SAP=6256.85,3401.36;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:47:0,27,20:0:0:27,20:897,699:-119.888,-51.8372,-43.7094,-68.3675,0,-62.3469	1/1:34:0,34,0:0:0:34,0:1144,0:-97.8894,-10.235,0,-97.8894,-10.235,-97.8894	1/1:61:0,61,0:0:0:61,0:2139,0:-181.888,-18.3628,0,-181.888,-18.3628,-181.888	1/1:72:0,71,0:0:0:71,0:2480,0:-216.249,-21.3731,0,-216.249,-21.3731,-216.249	1/2:27:0,11,16:0:0:11,16:386,567:-71.7299,-41.8325,-38.5211,-30.2273,0,-25.4108	1/2:14:0,8,6:0:0:8,6:288,209:-37.6276,-15.6327,-13.2245,-22.3212,0,-20.5151	1/1:57:0,57,0:0:0:57,0:2003,0:-175.584,-17.1587,0,-175.584,-17.1587,-175.584	1/1:87:0,86,0:0:0:86,0:2976,0:-252.005,-25.8886,0,-252.005,-25.8886,-252.005	1/2:80:0,44,36:0:0:44,36:1517,1273:-209.055,-93.552,-80.3067,-115.826,0,-104.989	1/1:55:0,54,0:0:0:54,0:1914,0:-167.263,-16.2556,0,-167.263,-16.2556,-167.263	1/2:32:0,18,14:0:0:18,14:627,487:-85.1893,-35.5621,-30.1436,-49.952,0,-45.7376	1/2:49:0,22,27:0:0:22,27:774,964:-129.677,-70.6967,-64.074,-59.3079,0,-51.1801	1/2:44:0,21,22:0:0:21,22:676,765:-107.832,-56.4871,-50.1655,-51.3427,0,-44.7201	1/1:28:0,28,0:0:0:28,0:980,0:-85.3006,-8.42884,0,-85.3006,-8.42884,-85.3006	1/2:28:1,10,16:1:36:10,16:360,557:-64.026,-35.8385,-35.7689,-25.5575,0,-23.6798	1/2:40:0,24,16:0:0:24,16:853,554:-107.623,-41.1309,-33.9062,-66.8184,0,-62.0019	1/1:9:0,9,0:0:0:9,0:300,0:-26.0973,-2.70927,0,-26.0973,-2.70927,-26.0973	1/1:22:0,22,0:0:0:22,0:754,0:-64.2387,-6.62266,0,-64.2387,-6.62266,-64.2387	1/1:11:0,11,0:0:0:11,0:368,0:-31.7721,-3.31133,0,-31.7721,-3.31133,-31.7721	1/2:47:0,23,24:0:0:23,24:820,854:-125.706,-60.8414,-53.9177,-65.195,0,-57.9703	1/2:81:0,26,55:0:0:26,55:930,1953:-215.09,-142.403,-134.576,-73.024,0,-56.4673	1/2:87:0,27,60:0:0:27,60:949,2062:-223.453,-148.186,-140.059,-75.5984,0,-57.5366	1/2:70:0,28,41:0:0:28,41:965,1446:-179.704,-104.105,-95.6766,-75.6057,0,-63.2635	1/2:18:0,14,4:0:0:14,4:500,144:-49.7862,-10.8067,-6.59225,-39.3081,0,-38.104	1/1:62:0,62,0:0:0:62,0:2179,0:-188.766,-18.6639,0,-188.766,-18.6639,-188.766	1/2:199:0,79,120:0:0:79,120:2805,4231:-525.547,-302.099,-278.318,-223.782,0,-187.659	1/2:136:0,54,81:0:0:54,81:1869,2854:-352.498,-207.644,-191.388,-144.86,0,-120.477	1/2:19:0,10,9:0:0:10,9:347,321:-50.9285,-23.7804,-20.7701,-27.4768,0,-24.7675	1/2:134:0,69,65:0:0:69,65:2404,2285:-354.245,-163.703,-142.932,-190.868,0,-171.302	1/1:50:0,50,0:0:0:50,0:1733,0:-150.075,-15.0515,0,-150.075,-15.0515,-150.075	1/2:74:0,27,47:0:0:27,47:937,1617:-190.494,-116.601,-108.473,-74.2196,0,-60.0712	1/1:24:0,24,0:0:0:24,0:851,0:-73.9733,-7.22472,0,-73.9733,-7.22472,-73.9733	1/1:17:0,17,0:0:0:17,0:595,0:-51.6312,-5.11751,0,-51.6312,-5.11751,-51.6312	1/1:4:0,4,0:0:0:4,0:132,0:-11.4045,-1.20412,0,-11.4045,-1.20412,-11.4045	1/2:7:0,3,4:0:0:3,4:108,143:-19.0131,-10.7631,-9.85999,-8.58219,0,-7.37807	1/1:11:0,11,0:0:0:11,0:396,0:-33.876,-3.31133,0,-33.876,-3.31133,-33.876	1/2:106:0,53,53:0:0:53,53:1843,1864:-279.343,-132.476,-116.522,-147.193,0,-131.238	1/1:67:0,67,0:0:0:67,0:2363,0:-204.044,-20.169,0,-204.044,-20.169,-204.044	1/2:22:0,10,12:0:0:10,12:349,420:-57.8907,-31.2259,-28.2156,-26.9899,0,-23.3775	1/2:9:0,7,2:0:0:7,2:244,68:-23.7491,-4.6181,-2.51089,-19.4194,0,-18.8174	1/2:40:0,23,17:0:0:23,17:788,600:-105.248,-44.2274,-37.3038,-61.3446,0,-56.2271	1/2:26:0,10,16:0:0:10,16:350,561:-68.4509,-41.3529,-38.3426,-27.4264,0,-22.6099	1/2:58:0,29,28:0:0:29,28:1020,996:-152.095,-72.8397,-64.1098,-79.3026,0,-70.8737	1/2:19:0,7,12:0:0:7,12:240,422:-49.4392,-30.7784,-28.6712,-18.9851,0,-15.3728	1/1:29:0,29,0:0:0:29,0:987,0:-86.7638,-8.72987,0,-86.7638,-8.72987,-86.7638	1/1:67:0,64,2:0:0:64,2:2244,68:-197.932,-19.2659,0,-192.962,-14.3283,-192.359	1/1:57:0,56,0:0:0:56,0:1914,0:-162.537,-16.8577,0,-162.537,-16.8577,-162.537	1/1:67:0,66,0:0:0:66,0:2296,0:-200.615,-19.868,0,-200.615,-19.868,-200.615	1/2:39:0,10,29:0:0:10,29:343,1028:-101.005,-74.0941,-71.0838,-27.2388,0,-18.5089	1/2:69:0,27,42:0:0:27,42:950,1484:-181.908,-107.125,-98.997,-75.115,0,-62.4718	1/1:8:0,8,0:0:0:8,0:273,0:-24.5188,-2.40824,0,-24.5188,-2.40824,-24.5188	1/2:9:0,6,3:0:0:6,3:201,108:-23.9168,-8.02226,-6.21608,-16.2163,0,-15.3132	1/1:87:0,87,0:0:0:87,0:2962,0:-252.622,-26.1896,0,-252.622,-26.1896,-252.622	1/2:36:0,20,16:0:0:20,16:718,564:-96.5376,-39.0398,-33.0192,-57.8226,0,-53.0061	1/2:6:0,2,4:0:0:2,4:72,142:-16.2153,-10.7142,-10.1121,-5.83438,0,-4.63026	1/2:112:0,49,61:0:0:49,61:1710,2146:-287.221,-154.721,-139.97,-132.501,0,-114.139	1/1:25:0,24,0:0:0:24,0:820,0:-71.7386,-7.22472,0,-71.7386,-7.22472,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chr09	794072	.	C	T	19159.5	PASS	AB=0.255075;ABP=5007.69;AC=70;AF=0.37234;AN=188;AO=2630;CIGAR=1X;DP=25754;DPB=25754;DPRA=1.30794;EPP=5713.98;EPPR=37078.6;GTI=36;LEN=1;MEANALT=1.12903;MQM=53.8817;MQMR=39.1111;NS=94;NUMALT=1;ODDS=0.847039;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94203;QR=825537;RO=23110;RPL=0;RPP=5713.98;RPPR=50185.7;RPR=2630;RUN=1;SAF=2630;SAP=5713.98;SAR=0;SRF=21487;SRP=37078.6;SRR=1623;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:29,14:29:1020:14:504:-32.6277,0,-63.4222	0/1:155:77,78:77:2764:78:2808:-204.931,0,-184.532	0/1:131:71,59:71:2548:59:2124:-151.138,0,-171.509	0/1:224:136,87:136:4741:87:3109:-212.3,0,-211.149	0/1:54:40,14:40:1440:14:504:-29.2519,0,-104.173	0/1:57:41,16:41:1468:16:572:-34.5081,0,-102.313	0/1:141:75,66:75:2647:66:2345:-168.26,0,-106.784	0/1:140:115,25:115:4092:25:900:-38.9668,0,-300.415	0/1:111:71,40:71:2536:40:1425:-94.5805,0,-171.737	0/1:113:82,31:82:2917:31:1112:-66.0382,0,-177.795	0/0:1236:1227,9:1227:43904:9:324:0,-343.295,-3748.1	0/1:138:124,14:124:4424:14:504:-4.03546,0,-294.407	0/1:133:119,14:119:4235:14:504:-5.54061,0,-284.505	0/0:339:314,25:314:11271:25:900:0,-20.8837,-883.634	0/1:143:121,22:121:4289:22:780:-27.417,0,-264.93	0/0:180:167,13:167:5995:13:468:0,-11.786,-477.048	0/1:262:229,33:229:8204:33:1188:-27.688,0,-605.861	0/1:191:170,21:170:6086:21:756:-10.4959,0,-449.635	0/0:658:644,14:644:23085:14:500:0,-154.888,-1878.17	0/1:126:100,25:100:3541:25:900:-43.3289,0,-236.652	0/1:115:88,27:88:3124:27:972:-53.055,0,-225.517	0/1:51:42,9:42:1491:9:324:-14.146,0,-100.848	0/1:81:65,16:65:2296:16:561:-26.3983,0,-137.476	0/1:106:80,26:80:2864:26:923:-51.2391,0,-210.24	0/1:82:40,42:40:1428:42:1497:-109.209,0,-96.7278	0/1:284:211,73:211:7514:73:2604:-148.879,0,-491.927	0/1:166:123,43:123:4400:43:1548:-89.0272,0,-314.89	0/1:45:37,8:37:1319:8:284:-12.3211,0,-99.6033	0/1:162:119,43:119:4229:43:1548:-90.6592,0,-263.24	0/1:143:53,90:53:1904:90:3202:-244.734,0,-120.976	0/1:68:54,14:54:1891:14:504:-25.1951,0,-120.538	0/0:406:401,5:401:14364:5:176:0,-106.923,-1219.2	0/0:441:433,8:433:15507:8:288:0,-106.651,-1299.96	0/0:945:943,1:943:33678:1:36:0,-280.886,-2795.66	0/0:554:549,5:549:19569:5:180:0,-150.26,-1630.85	0/0:438:434,4:434:15545:4:144:0,-118.571,-1279.87	0/1:392:345,47:345:12240:47:1688:-33.9246,0,-778.877	0/1:153:55,98:55:1976:98:3494:-267.175,0,-122.858	0/0:941:932,9:932:33344:9:324:0,-253.843,-2767.16	0/0:210:210,0:210:7524:0:0:0,-63.2163,-648.706	0/1:104:78,26:78:2770:26:932:-52.7532,0,-206.165	0/0:413:404,9:404:14458:9:320:0,-96.1852,-1221.16	0/1:128:93,35:93:3328:35:1252:-74.1652,0,-250.805	0/1:133:117,16:117:4146:16:576:-12.0161,0,-256.033	0/1:127:108,19:108:3793:19:680:-23.0738,0,-210.022	0/1:116:79,36:79:2800:36:1292:-81.5314,0,-119.817	0/1:111:60,51:60:2140:51:1832:-130.009,0,-147.756	0/1:176:126,50:126:4425:50:1792:-108.351,0,-235.936	0/1:90:63,27:63:2234:27:968:-60.1147,0,-139.036	0/1:104:90,14:90:3212:14:500:-13.9275,0,-205.26	0/1:159:80,79:80:2803:79:2836:-206.627,0,-104.334	0/0:393:391,2:391:13993:2:72:0,-111.473,-1217.17	0/1:111:57,54:57:2028:54:1931:-139.545,0,-126.358	0/1:57:46,11:46:1619:11:381:-17.4497,0,-85.1523	0/0:248:246,2:246:8807:2:72:0,-68.0274,-737.623	0/1:84:74,10:74:2627:10:360:-7.41135,0,-199.665	0/1:95:34,61:34:1216:61:2177:-167.44,0,-46.8833	0/0:356:352,3:352:12608:3:108:0,-97.1473,-1088.16	0/0:638:636,2:636:22808:2:72:0,-186.394,-1963.26	0/1:63:49,14:49:1756:14:500:-26.3093,0,-130.914	0/1:283:255,28:255:9093:28:1008:-5.69067,0,-611.369	0/0:285:283,2:283:10124:2:72:0,-79.0501,-883.875	0/1:171:104,67:104:3695:67:2408:-165.311,0,-194.945	0/1:164:119,44:119:4234:44:1567:-91.5193,0,-271.724	0/1:86:66,20:66:2359:20:712:-38.4238,0,-174.485	0/1:91:65,26:65:2259:26:936:-57.0305,0,-119.033	0/1:117:82,35:82:2927:35:1260:-78.3779,0,-191.908	0/0:81:73,7:73:2628:7:248:0,-1.75748,-196.023	0/0:1118:1115,3:1115:39927:3:108:0,-326.491,-3427.16	0/1:47:40,7:40:1420:7:252:-8.63831,0,-103.868	0/1:250:225,25:225:8011:25:892:-5.16856,0,-568.004	0/0:343:339,4:339:12144:4:144:0,-89.9516,-1044.16	0/1:42:30,12:30:1076:12:432:-26.4793,0,-71.7937	0/1:74:58,16:58:2076:16:572:-29.374,0,-145.244	0/1:143:107,36:107:3815:36:1288:-73.0124,0,-280.312	0/1:156:113,43:113:3972:43:1542:-91.8627,0,-191.05	0/1:117:80,37:80:2868:37:1322:-83.283,0,-200.019	0/1:83:67,16:67:2389:16:568:-26.1117,0,-172.69	0/0:655:643,10:643:23031:10:360:0,-165.174,-1898.3	0/1:100:57,43:57:2044:43:1544:-108.924,0,-147.287	0/1:74:51,23:51:1820:23:824:-50.5408,0,-117.021	0/1:207:148,59:148:5278:59:2120:-128.242,0,-338.138	0/1:208:178,30:178:6337:30:1076:-34.3834,0,-445.477	0/1:221:199,22:199:7076:22:792:-4.94229,0,-416.832	0/1:194:172,22:172:6129:22:792:-13.0701,0,-431.427	0/1:376:305,71:305:10808:71:2556:-116.692,0,-609.43	0/1:69:42,27:42:1500:27:972:-66.6183,0,-102.269	0/1:132:99,33:99:3539:33:1184:-65.8542,0,-244.629	0/1:169:133,36:133:4754:36:1284:-64.4205,0,-344.72	0/0:2554:2538,15:2538:90956:15:540:0,-720.937,-7750.92	0/0:2594:2572,19:2572:92053:19:684:0,-721.234,-7848.48	0/0:123:114,9:114:4016:9:320:0,-7.91493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chr09	794079	.	TGACGAAGAC	CGACAATGAC,TGACAATGAT,CGACGATGAC	439982	PASS	AB=0.600185,0.205558,0.218759;ABP=1514.97,13062.8,10030.8;AC=99,67,22;AF=0.526596,0.356383,0.117021;AN=188;AO=17334,3642,3208;CIGAR=1X3M1X1M1X3M,4M1X1M1X2M1X,1X5M1X3M;DP=24430;DPB=24431.6;DPRA=0,0,0.620652;EPP=37435.1,7902.83,5226.79;EPPR=0;GTI=10;LEN=10,10,10;MEANALT=4.95745,4.95745,5.47059;MQM=39.8854,55.5807,41.6222;MQMR=0;NS=94;NUMALT=3;ODDS=16346.8;PAIRED=0,0,0;PAIREDR=0;PAO=1.33333,6,1.33333;PQA=47.3333,208,47.3333;PQR=47.3333;PRO=1.33333;QA=605748,128749,111202;QR=0;RO=0;RPL=3,1,1;RPP=37617.3,7902.83,6960.41;RPPR=0;RPR=17331,3641,3207;RUN=1,1,1;SAF=17313,3642,2994;SAP=37461.1,7911.51,5234.31;SAR=21,0,214;SRF=0;SRP=0;SRR=0;TYPE=complex,complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:37:0,10,22,5:0:0:10,22,5:342,784,178:-89.6385,-63.8021,-60.7918,-25.8319,0,-19.2092,-75.8246,-49.9904,-12.0108,-74.3194	1/2:154:0,76,78,0:0:0:76,78,0:2687,2784,0:-431.13,-226.067,-203.189,-205.407,0,-181.927,-431.13,-226.067,-205.407,-431.13	1/2:135:0,73,62,0:0:0:73,62,0:2524,2182,0:-369.452,-177.382,-155.407,-192.409,0,-173.745,-369.452,-177.382,-192.409,-369.452	1/2:161:0,70,89,1:0:0:70,89,1:2458,3154,36:-451.82,-256.545,-235.473,-195.314,0,-168.522,-448.918,-253.643,-192.412,-448.617	2/3:56:0,14,27,15:0:0:14,27,15:492,952,491:-115.25,-78.687,-74.4726,-37.8884,-1.31724,-29.7606,-77.3641,-40.8071,0,-72.8486	1/2:53:0,15,29,8:0:0:15,29,8:512,1027,284:-122.531,-83.5387,-79.0232,-38.9959,0,-30.266,-100.176,-61.1858,-16.6323,-97.7682	1/2:104:0,36,67,0:0:0:36,67,0:1266,2366,0:-293.033,-192.534,-181.697,-100.646,0,-80.4769,-293.033,-192.534,-100.646,-293.033	1/2:136:0,63,53,19:0:0:63,53,19:2163,1876,656:-317.578,-152.622,-133.657,-164.964,0,-149.009,-266.277,-101.325,-113.66,-260.558	2/3:103:0,12,69,19:0:0:12,69,19:426,2411,666:-247.503,-214.885,-211.273,-51.8906,-19.2731,-31.1196,-195.613,-162.996,0,-189.893	1/2:93:0,61,31,0:0:0:61,31,0:2152,1078,0:-258.093,-87.4482,-69.0854,-170.706,0,-161.374,-258.093,-87.4482,-170.706,-258.093	1/3:1215:0,865,14,322:0:0:865,14,322:30204,502,11404:-3300.28,-913.398,-653.007,-3259.36,-872.477,-3255.15,-2386.91,0,-2345.99,-2289.98	1/2:118:0,66,28,21:0:0:66,28,21:2278,1003,736:-254.893,-81.6945,-61.8265,-173.208,0,-164.779,-197.66,-24.4666,-115.973,-191.338	1/2:110:0,63,25,21:0:0:63,25,21:2177,882,756:-236.844,-71.7152,-52.7503,-165.131,0,-157.605,-177.545,-12.4176,-105.829,-171.223	1/1:342:0,313,24,0:0:0:313,24,0:10903,848,0:-948.071,-94.2224,0,-879.126,-25.2055,-871.902,-948.071,-94.2224,-879.126,-948.071	1/3:122:0,50,28,43:0:0:50,28,43:1744,972,1257:-231.514,-93.1206,-78.0691,-152.541,-14.1276,-144.112,-138.376,0,-59.4085,-125.431	1/3:183:0,102,20,59:0:0:102,20,59:3583,702,2068:-445.308,-163.789,-133.084,-388.244,-106.724,-382.224,-281.519,0,-224.455,-263.758	1/2:267:0,233,33,0:0:0:233,33,0:8104,1165,0:-710.374,-94.3864,-24.2464,-616.131,0,-606.197,-710.374,-94.3864,-616.131,-710.374	1/2:190:0,165,20,0:0:0:165,20,0:5785,712,0:-498.878,-57.9254,-8.25544,-441.005,0,-434.984,-498.878,-57.9254,-441.005,-498.878	1/1:657:0,640,12,0:0:0:640,12,0:22371,430,0:-1894.52,-192.659,0,-1859.54,-157.6,-1855.93,-1894.52,-192.659,-1859.54,-1894.52	1/2:112:0,38,49,25:0:0:38,49,25:1325,1742,783:-246.866,-141.853,-130.414,-105.036,0,-90.2855,-186.951,-81.946,-45.1266,-179.425	1/2:109:0,40,51,15:0:0:40,51,15:1383,1814,461:-256.116,-147.753,-135.712,-108.395,0,-93.0424,-221.443,-113.086,-73.725,-216.927	1/2:44:0,9,32,1:0:0:9,32,1:311,1122,23:-116.104,-91.3678,-88.6585,-24.7868,0,-15.1539,-114.609,-89.873,-23.299,-114.308	2/3:63:0,11,36,16:0:0:11,36,16:393,1282,501:-142.839,-111.519,-108.208,-38.3654,-7.02764,-27.5283,-104.458,-73.1416,0,-99.6412	1/2:104:0,23,66,14:0:0:23,66,14:783,2349,429:-251.737,-191.304,-184.381,-60.4552,0,-40.5872,-219.372,-158.943,-28.096,-215.158	1/2:81:0,39,42,0:0:0:39,42,0:1367,1475,0:-226.291,-119.429,-107.689,-107.204,0,-94.561,-226.291,-119.429,-107.204,-226.291	1/2:245:0,81,135,29:0:0:81,135,29:2806,4754,961:-608.86,-386.819,-362.436,-222.057,0,-181.418,-534.013,-311.974,-147.211,-525.283	1/2:163:0,55,78,29:0:0:55,78,29:1905,2760,901:-373.668,-224.368,-207.812,-149.324,0,-125.844,-305.25,-155.957,-80.9108,-296.52	1/2:47:0,19,15,13:0:0:19,15,13:636,536,446:-93.0962,-43.6706,-37.9511,-49.4292,0,-44.9137,-58.1686,-8.753,-14.4961,-54.2552	1/2:138:0,41,70,25:0:0:41,70,25:1446,2482,805:-316.779,-202.066,-189.724,-114.736,0,-93.6642,-254.583,-139.873,-52.544,-247.057	1/2:147:0,54,92,0:0:0:54,92,0:1878,3248,0:-411.093,-264.08,-247.824,-147.113,0,-119.418,-411.093,-264.08,-147.113,-411.093	2/3:55:0,11,22,20:0:0:11,22,20:389,783,612:-110.157,-79.1531,-75.8418,-46.3543,-15.3366,-39.7316,-63.7962,-32.7982,0,-57.7756	1/1:412:0,404,4,2:0:0:404,4,2:14037,139,72:-1216.01,-121.616,0,-1204.73,-110.314,-1203.52,-1210.28,-115.873,-1198.99,-1209.68	1/1:440:0,425,8,0:0:0:425,8,0:14908,278,0:-1296.27,-127.938,0,-1273.83,-105.45,-1271.42,-1296.27,-127.938,-1273.83,-1296.27	1/1:950:0,934,1,4:0:0:934,1,4:32226,36,144:-2732.04,-281.162,0,-2729.11,-278.229,-2728.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chr09	1514630	.	G	T	92507	PASS	AB=0.493797;ABP=4.38417;AC=131;AF=0.696809;AN=188;AO=4558;CIGAR=1X;DP=6646;DPB=6646;DPRA=0;EPP=9900.58;EPPR=4526.19;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.3256;MQMR=59.8243;NS=94;NUMALT=1;ODDS=7.68555;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=163149;QR=74180;RO=2083;RPL=0;RPP=9900.58;RPPR=4526.19;RPR=4558;RUN=1;SAF=4558;SAP=9900.58;SAR=0;SRF=2083;SRP=4526.19;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:15,23:15:540:23:815:-62.1016,0,-37.4974	1/1:104:0,104:0:0:104:3673:-330.682,-31.3071,0	1/1:61:1,60:1:36:60:2156:-190.534,-14.7646,0	1/1:168:0,168:0:0:168:6028:-542.412,-50.573,0	0/1:75:33,42:33:1158:42:1496:-112.357,0,-81.9443	0/1:41:17,24:17:604:24:844:-63.8986,0,-42.3484	1/1:94:0,94:0:0:94:3342:-300.485,-28.2968,0	0/1:88:59,29:59:2059:29:1044:-67.7842,0,-158.654	0/1:85:30,55:30:1061:55:1957:-150.352,0,-70.2118	0/1:70:30,40:30:1042:40:1440:-108.826,0,-72.9944	0/1:57:23,34:23:828:34:1220:-92.8913,0,-57.6854	0/1:59:34,25:34:1224:25:900:-63.5241,0,-92.6887	0/1:40:24,16:24:864:16:576:-40.1161,0,-66.0414	0/1:34:20,14:20:720:14:495:-34.4947,0,-54.8938	0/1:41:20,21:20:720:21:756:-55.9647,0,-52.7865	0/1:27:16,11:16:557:11:396:-27.8324,0,-42.3278	0/1:34:12,22:12:428:22:792:-61.3354,0,-28.6238	1/1:28:1,27:1:36:27:972:-84.1996,-4.83057,0	1/1:34:0,34:0:0:34:1205:-108.741,-10.235,0	0/1:140:91,49:91:3264:49:1764:-116.871,0,-251.836	0/1:111:56,55:56:1997:55:1961:-143.329,0,-146.588	0/1:94:65,29:65:2310:29:1029:-64.5959,0,-179.86	1/1:78:0,78:0:0:78:2789:-251.042,-23.4803,0	0/1:134:62,72:62:2224:72:2576:-191.625,0,-160.086	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:285:101,184:101:3621:184:6601:-506.927,0,-239.362	0/1:111:57,54:57:2044:54:1914:-139.095,0,-150.767	0/1:20:10,10:10:360:10:360:-26.7237,0,-26.7237	0/1:138:65,73:65:2310:73:2604:-192.896,0,-166.615	1/1:109:0,109:0:0:109:3912:-352.205,-32.8123,0	0/1:113:52,61:52:1868:61:2192:-163.174,0,-134.383	1/1:9:0,9:0:0:9:324:-29.4832,-2.70927,0	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	1/1:11:0,11:0:0:11:392:-35.6023,-3.31133,0	0/1:14:5,9:5:180:9:320:-24.736,0,-12.3376	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/1:124:62,62:62:2224:62:2215:-162.133,0,-162.966	1/1:202:0,202:0:0:202:7236:-650.944,-60.8081,0	0/1:76:45,31:45:1601:31:1116:-77.8725,0,-121.5	0/1:6:3,3:3:108:3:104:-7.89663,0,-8.26899	0/1:100:42,58:42:1463:58:2084:-157.615,0,-101.855	0/1:37:18,19:18:648:19:684:-50.6844,0,-47.5138	0/1:122:59,63:59:2120:63:2230:-164.19,0,-154.343	0/1:51:24,27:24:864:27:967:-71.9711,0,-62.73	0/1:55:29,26:29:1025:26:936:-68.0019,0,-76.004	1/1:121:0,121:0:0:121:4337:-390.205,-36.4246,0	1/1:100:0,100:0:0:100:3573:-321.71,-30.103,0	1/1:88:0,88:0:0:88:3144:-283.118,-26.4906,0	0/1:20:12,8:12:432:8:288:-20.2468,0,-33.2006	0/1:98:47,51:47:1677:51:1821:-134.64,0,-121.714	1/1:197:1,196:1:36:196:7037:-629.392,-55.7046,0	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	1/1:86:0,85:0:0:85:3044:-273.75,-25.5876,0	1/1:31:0,31:0:0:31:1112:-100.02,-9.33193,0	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/1:58:28,30:28:974:30:1072:-79.3103,0,-70.4714	1/1:57:0,57:0:0:57:2037:-183.486,-17.1587,0	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5581	1/1:21:0,21:0:0:21:752:-67.9778,-6.32163,0	0/1:63:25,38:25:862:38:1349:-102.676,0,-58.9258	0/1:100:54,46:54:1910:46:1656:-119.166,0,-142.071	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	1/1:131:0,130:0:0:130:4652:-417.808,-39.1339,0	0/1:148:78,70:78:2796:70:2516:-182.13,0,-207.328	0/1:76:35,41:35:1245:41:1470:-109.579,0,-89.4744	1/1:42:0,42:0:0:42:1500:-135.283,-12.6433,0	0/1:138:78,60:78:2788:60:2160:-153.122,0,-209.605	0/1:86:54,30:54:1929:30:1065:-70.4853,0,-147.868	1/1:29:0,29:0:0:29:1043:-94.1444,-8.72987,0	1/1:67:0,67:0:0:67:2408:-216.825,-20.169,0	0/1:43:32,11:32:1118:11:396:-23.0385,0,-87.9602	0/1:31:24,7:24:860:7:237:-12.3271,0,-68.3899	0/1:93:49,44:49:1752:44:1576:-114.118,0,-129.937	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/1:153:75,78:75:2628:78:2770:-203.436,0,-190.704	1/1:121:0,121:0:0:121:4325:-389.339,-36.4246,0	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:65:40,25:40:1417:25:896:-61.3934,0,-108.258	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:59:0,59:0:0:59:2120:-190.976,-17.7608,0	0/1:39:20,19:20:705:19:683:-50.0282,0,-52.0326	0/1:128:50,78:50:1785:78:2796:-213.337,0,-122.362	0/1:63:36,26:36:1296:26:928:-64.7578,0,-97.9202	1/1:45:0,45:0:0:45:1620:-146.062,-13.5464,0	0/1:51:27,24:27:968:24:860:-62.3293,0,-72.0564	1/1:85:2,83:2:72:83:2964:-260.07,-18.7508,0	1/1:25:0,25:0:0:25:900:-81.3025,-7.52575,0	0/1:66:36,30:36:1296:30:1069:-76.634,0,-97.076	1/1:65:0,65:0:0:65:2328:-209.737,-19.567,0	1/1:35:0,35:0:0:35:1260:-113.546,-10.5361,0	0/1:75:36,39:36:1292:39:1404:-104.001,0,-93.9825	0/1:52:35,17:35:1226:17:612:-39.7599,0,-94.9746	1/1:44:0,44:0:0:44:1580:-142.435,-13.2453,0	1/1:54:0,54:0:0:54:1940:-174.812,-16.2556,0
chr09	1514654	.	T	C	89843.9	PASS	AB=0.50063;ABP=3.02398;AC=131;AF=0.696809;AN=188;AO=4461;CIGAR=1X;DP=6450;DPB=6450;DPRA=0;EPP=9672.58;EPPR=4313.38;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.3779;MQMR=59.868;NS=94;NUMALT=1;ODDS=8.64664;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158552;QR=69498;RO=1985;RPL=4459;RPP=9672.58;RPPR=4313.38;RPR=2;RUN=1;SAF=4461;SAP=9689.95;SAR=0;SRF=1985;SRP=4313.38;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:37:13,24:13:452:24:830:-63.8197,0,-29.873	1/1:100:0,100:0:0:100:3560:-320.519,-30.103,0	1/1:60:1,59:1:36:59:2076:-183.492,-14.4635,0	1/1:166:0,166:0:0:166:5929:-533.567,-49.971,0	0/1:71:31,40:31:1049:40:1405:-105.372,0,-73.3379	0/1:38:15,23:15:532:23:819:-62.5434,0,-36.7739	1/1:91:0,91:0:0:91:3228:-290.237,-27.3937,0	0/1:84:55,29:55:1905:29:1025:-67.2742,0,-145.903	0/1:78:28,50:28:964:50:1775:-136.533,0,-63.5879	0/1:68:28,40:28:966:40:1427:-108.257,0,-66.7771	0/1:57:23,34:23:812:34:1211:-92.08,0,-56.2422	0/1:58:32,26:32:1088:26:917:-65.3658,0,-80.7448	0/1:37:21,16:21:748:16:572:-40.6576,0,-56.5072	0/1:31:18,13:18:644:13:468:-33.1052,0,-48.9587	0/1:37:17,20:17:600:20:716:-53.5693,0,-43.1911	0/1:25:15,10:15:532:10:360:-25.1959,0,-40.6873	0/1:32:10,22:10:343:22:784:-61.2157,0,-21.5676	1/1:28:1,27:1:36:27:951:-82.306,-4.83057,0	1/1:33:0,33:0:0:33:1180:-106.42,-9.93399,0	0/1:138:89,49:89:3122:49:1756:-116.753,0,-239.668	0/1:103:49,54:49:1706:54:1911:-141.243,0,-122.818	0/1:91:63,28:63:2211:28:996:-62.5612,0,-171.704	1/1:77:0,77:0:0:77:2737:-246.422,-23.1793,0	0/1:131:59,72:59:2037:72:2569:-191.852,0,-144.167	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0	0/1:275:97,178:97:3404:178:6349:-488.564,0,-223.167	0/1:109:56,53:56:1972:53:1900:-138.443,0,-144.909	0/1:21:10,11:10:360:11:381:-28.299,0,-26.4227	0/1:137:65,72:65:2279:72:2540:-187.465,0,-164.104	1/1:109:0,109:0:0:109:3895:-350.697,-32.8123,0	0/1:112:51,61:51:1770:61:2175:-161.946,0,-125.864	1/1:9:0,9:0:0:9:324:-29.4832,-2.70927,0	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	1/1:10:0,10:0:0:10:338:-30.7443,-3.0103,0	0/1:14:5,9:5:176:9:320:-24.736,0,-11.9706	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:118:59,59:59:1990:59:2084:-152.169,0,-143.575	1/1:196:0,196:0:0:196:7013:-630.897,-59.0019,0	0/1:75:44,31:44:1551:31:1112:-77.8132,0,-117.304	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:100:42,57:42:1496:57:2033:-152.988,0,-104.773	0/1:37:18,19:18:640:19:675:-49.8763,0,-46.7912	0/1:115:56,59:56:1979:59:2124:-156.765,0,-143.766	0/1:50:23,27:23:798:27:944:-70.1913,0,-57.0851	0/1:53:28,25:28:990:25:866:-62.2993,0,-73.4581	1/1:115:0,115:0:0:115:4103:-369.169,-34.6185,0	1/1:98:0,98:0:0:98:3415:-307.511,-29.5009,0	1/1:85:0,84:0:0:84:2977:-267.863,-25.2865,0	0/1:19:11,8:11:396:8:288:-20.5478,0,-30.2632	0/1:94:44,50:44:1547:50:1780:-132.158,0,-111.224	1/1:196:1,195:1:36:195:6934:-619.92,-55.4036,0	0/1:11:5,6:5:176:6:216:-16.4792,0,-12.8737	1/1:86:0,86:0:0:86:3063:-275.805,-25.8886,0	1/1:31:0,31:0:0:31:1089:-97.9464,-9.33193,0	0/1:13:9,4:9:324:4:144:-9.40023,0,-25.5925	0/1:53:26,26:26:916:26:928:-67.9337,0,-66.8745	1/1:55:0,54:0:0:54:1936:-174.19,-16.2556,0	0/1:9:8,1:8:280:1:36:-0.889005,0,-22.83	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	0/1:63:25,38:25:854:38:1349:-102.676,0,-58.207	0/1:98:52,46:52:1798:46:1624:-116.913,0,-132.597	0/1:6:3,3:3:104:3:104:-7.89663,0,-7.89663	1/1:124:0,124:0:0:124:4405:-395.983,-37.3277,0	0/1:143:75,68:75:2641:68:2419:-174.911,0,-194.89	0/1:70:31,39:31:1104:39:1392:-104.395,0,-78.5985	1/1:40:0,40:0:0:40:1440:-129.869,-12.0412,0	0/1:133:72,61:72:2547:61:2175:-155.975,0,-189.431	0/1:78:49,29:49:1743:29:1035:-69.979,0,-133.673	1/1:27:0,27:0:0:27:957:-86.399,-8.12781,0	1/1:67:0,67:0:0:67:2382:-214.506,-20.169,0	0/1:42:30,12:30:1051:12:420:-25.4908,0,-82.2564	0/1:30:23,7:23:798:7:248:-13.6333,0,-63.1057	0/1:90:47,43:47:1660:43:1525:-110.448,0,-122.577	0/1:7:4,3:4:140:3:108:-7.96796,0,-10.8374	0/1:145:70,75:70:2418:75:2643:-194.404,0,-174.204	1/1:120:0,120:0:0:120:4283:-385.555,-36.1236,0	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:63:38,25:38:1336:25:888:-61.2741,0,-101.575	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	1/1:59:0,59:0:0:59:2088:-188.117,-17.7608,0	0/1:39:21,18:21:716:18:648:-46.8764,0,-53.0146	0/1:124:48,76:48:1699:76:2685:-204.565,0,-115.856	0/1:62:35,27:35:1235:27:945:-66.6673,0,-92.7896	1/1:44:0,44:0:0:44:1572:-141.743,-13.2453,0	0/1:53:27,26:27:960:26:919:-67.0147,0,-70.7333	1/1:86:2,84:2:72:84:3000:-263.308,-19.0519,0	1/1:25:0,25:0:0:25:886:-80.0513,-7.52575,0	0/1:67:36,31:36:1259:31:1093:-78.4776,0,-93.4426	1/1:66:0,66:0:0:66:2329:-209.813,-19.868,0	1/1:35:0,35:0:0:35:1235:-111.294,-10.5361,0	0/1:69:34,35:34:1190:35:1211:-88.4982,0,-86.6085	0/1:50:34,16:34:1202:16:576:-37.1235,0,-93.4327	1/1:43:0,43:0:0:43:1532:-138.133,-12.9443,0	1/1:53:0,53:0:0:53:1880:-169.432,-15.9546,0
chr09	1514666	.	T	C	35326.5	PASS	AB=0.50736;ABP=4.92819;AC=57;AF=0.303191;AN=188;AO=2074;CIGAR=1X;DP=6595;DPB=6595;DPRA=1.12077;EPP=4360.19;EPPR=9813.72;GTI=0;LEN=1;MEANALT=1.04918;MQM=59.8187;MQMR=59.3712;NS=94;NUMALT=1;ODDS=7.55295;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73665;QR=161317;RO=4518;RPL=2057;RPP=4360.19;RPPR=9813.72;RPR=17;RUN=1;SAF=2074;SAP=4506.64;SAR=0;SRF=4518;SRP=9813.72;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:38:23,15:23:819:15:536:-37.1357,0,-62.4624	0/0:105:105,0:105:3727:0:0:0,-31.6081,-335.536	0/0:60:58,2:58:2064:2:72:0,-11.2251,-179.032	0/0:167:167,0:167:5981:0:0:0,-50.272,-538.166	0/1:75:41,34:41:1459:34:1209:-86.5085,0,-109.028	0/1:39:23,16:23:805:16:572:-40.0733,0,-60.9916	0/0:93:93,0:93:3308:0:0:0,-27.9958,-297.415	0/1:86:29,57:29:1027:57:2043:-158.147,0,-66.8536	0/1:82:52,30:52:1847:30:1072:-72.108,0,-141.79	0/1:69:40,29:40:1436:29:1026:-71.7505,0,-108.767	0/1:56:34,22:34:1224:22:784:-54.0262,0,-93.5525	0/1:60:25,35:25:900:35:1229:-92.8333,0,-63.223	0/1:40:16,24:16:572:24:864:-66.0414,0,-39.7545	0/1:32:13,19:13:468:19:684:-52.2574,0,-32.8041	0/1:41:21,20:21:748:20:720:-52.7865,0,-55.2428	0/1:26:11,15:11:392:15:531:-40.2951,0,-27.7707	0/1:33:21,12:21:743:12:432:-29.2872,0,-57.224	0/0:28:27,1:27:963:1:32:0,-5.22953,-83.7866	0/0:34:34,0:34:1215:0:0:0,-10.235,-109.623	0/1:143:49,94:49:1751:94:3334:-257.229,0,-114.798	0/1:108:51,57:51:1832:57:2039:-151.271,0,-132.63	0/1:93:28,65:28:977:65:2321:-180.995,0,-60.2163	0/0:79:79,0:79:2825:0:0:0,-23.7814,-254.28	0/1:133:72,61:72:2563:61:2178:-156.248,0,-190.743	0/0:42:42,0:42:1508:0:0:0,-12.6433,-136.015	0/1:284:182,102:182:6510:102:3637:-241.771,0,-500.317	0/1:111:55,56:55:1980:56:1987:-145.655,0,-145.002	0/1:21:11,10:11:392:10:360:-26.4227,0,-29.2984	0/1:137:69,68:69:2446:68:2392:-174.291,0,-179.009	0/0:109:109,0:109:3889:0:0:0,-32.8123,-350.159	0/1:112:60,52:60:2156:52:1852:-133.245,0,-160.506	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.4832	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/0:10:10,0:10:341:0:0:0,-3.0103,-31.0106	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:124:60,64:60:2134:64:2242:-164.613,0,-154.846	0/0:203:203,0:203:7206:0:0:0,-61.1091,-648.314	0/1:75:31,44:31:1116:44:1572:-119.194,0,-78.1735	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:104:61,42:61:2180:42:1477:-101.855,0,-164.988	0/1:36:19,17:19:684:17:593:-42.8576,0,-50.9854	0/1:120:61,59:61:2184:59:2107:-153.775,0,-160.658	0/1:48:25,23:25:887:23:820:-59.6731,0,-65.6693	0/1:51:26,25:26:928:25:883:-64.4341,0,-68.4848	0/0:120:120,0:120:4271:0:0:0,-36.1236,-384.257	0/0:99:99,0:99:3533:0:0:0,-29.802,-318.12	0/0:87:87,0:87:3091:0:0:0,-26.1896,-278.356	0/1:20:8,12:8:288:12:419:-32.0221,0,-20.2468	0/1:98:51,47:51:1805:47:1673:-121.354,0,-133.217	0/0:199:198,1:198:7072:1:36:0,-56.3067,-632.507	0/1:11:6,5:6:216:5:171:-12.4141,0,-16.4792	0/0:84:84,0:84:2999:0:0:0,-25.2865,-270.051	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.02	0/1:12:4,8:4:144:8:284:-22.291,0,-9.70126	0/1:57:29,28:29:1044:28:979:-71.1304,0,-77.0937	0/0:55:55,0:55:1959:0:0:0,-16.5566,-176.471	0/1:9:1,8:1:36:8:288:-23.5581,0,-0.889005	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3388	0/1:61:38,23:38:1368:23:809:-54.7655,0,-104.991	0/1:100:47,53:47:1680:53:1883:-139.645,0,-121.325	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/0:129:129,0:129:4606:0:0:0,-38.8329,-414.123	0/1:147:68,79:68:2440:79:2818:-209.607,0,-175.596	0/1:76:40,36:40:1428:36:1296:-94.0657,0,-105.805	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.346	0/1:140:65,75:65:2324:75:2625:-194.346,0,-167.273	0/1:84:31,53:31:1116:53:1876:-143.742,0,-75.4368	0/0:29:29,0:29:1032:0:0:0,-8.72987,-93.1486	0/0:68:68,0:68:2424:0:0:0,-20.47,-218.275	0/1:44:12,32:12:428:32:1132:-88.9048,0,-25.6135	0/1:30:7,23:7:248:23:824:-65.4524,0,-13.6333	0/1:94:44,49:44:1572:49:1741:-128.688,0,-113.486	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:146:71,75:71:2543:75:2644:-194.253,0,-185.13	0/0:119:119,0:119:4253:0:0:0,-35.8226,-382.859	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/1:63:25,38:25:896:38:1360:-103.736,0,-61.9955	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:59:59,0:59:2111:0:0:0,-17.7608,-190.166	0/1:40:18,22:18:648:22:792:-59.5645,0,-46.5753	0/1:131:79,51:79:2819:51:1815:-124.125,0,-214.427	0/1:61:26,35:26:913:35:1228:-92.4583,0,-64.0811	0/0:42:42,0:42:1500:0:0:0,-12.6433,-135.266	0/1:51:25,26:25:892:26:928:-68.4573,0,-65.1903	0/0:85:83,2:83:2967:2:72:0,-18.7508,-260.338	0/0:25:25,0:25:887:0:0:0,-7.52575,-80.1296	0/1:67:31,36:31:1112:36:1275:-94.8833,0,-80.1871	0/0:66:66,0:66:2363:0:0:0,-19.868,-212.874	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.069	0/1:74:37,37:37:1311:37:1309:-95.8094,0,-95.9564	0/1:52:16,36:16:576:36:1284:-100.181,0,-36.5214	0/0:44:44,0:44:1575:0:0:0,-13.2453,-141.984	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.172
chr09	1770637	.	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chr09	1773050	.	A	T	81513.9	PASS	AB=0.509117;ABP=8.07831;AC=57;AF=0.303191;AN=188;AO=3594;CIGAR=1X;DP=11107;DPB=11107;DPRA=1.14009;EPP=78.7254;EPPR=115.4;GTI=0;LEN=1;MEANALT=1.13846;MQM=59.9967;MQMR=59.9751;NS=94;NUMALT=1;ODDS=2.81772;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=127653;QR=268642;RO=7499;RPL=1620;RPP=78.7254;RPPR=114.68;RPR=1974;RUN=1;SAF=2;SAP=7789.92;SAR=3592;SRF=1;SRP=16278.2;SRR=7498;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:30,34:30:1076:34:1212:-89.7607,0,-77.5271	0/0:83:80,3:80:2876:3:108:0,-14.9103,-249.001	0/0:264:264,0:264:9466:0:0:0,-79.4719,-851.896	0/0:254:254,0:254:9088:0:0:0,-76.4616,-817.894	0/1:40:18,22:18:648:22:788:-59.2036,0,-46.6107	0/1:50:24,26:24:860:26:928:-68.7868,0,-62.6703	0/0:91:91,0:91:3259:0:0:0,-27.3937,-293.53	0/1:198:93,105:93:3336:105:3736:-276.839,0,-240.853	0/1:103:46,57:46:1652:57:2036:-152.506,0,-117.962	0/1:97:55,42:55:1972:42:1496:-105.735,0,-148.555	0/1:171:89,82:89:3196:82:2911:-210.75,0,-236.386	0/1:135:75,60:75:2696:60:2126:-150.968,0,-202.245	0/1:109:55,54:55:1963:54:1884:-137.024,0,-144.132	0/1:188:102,85:102:3631:85:3027:-216.009,0,-270.113	0/1:69:32,37:32:1148:37:1312:-97.6106,0,-82.8138	0/1:111:60,51:60:2148:51:1798:-128.686,0,-160.173	0/1:74:37,36:37:1315:36:1267:-91.9971,0,-96.3161	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.692	0/0:92:92,0:92:3259:0:0:0,-27.6948,-293.485	0/1:184:82,101:82:2940:101:3608:-269.478,0,-209.386	0/1:221:110,111:110:3952:111:3964:-290.424,0,-289.343	0/1:70:22,48:22:792:48:1701:-132.303,0,-50.5336	0/0:46:46,0:46:1644:0:0:0,-13.8474,-148.249	0/1:45:17,28:17:612:28:996:-76.4085,0,-41.8671	0/0:45:43,1:43:1540:1:36:0,-10.0069,-135.295	0/1:298:165,133:165:5928:133:4741:-337.142,0,-443.919	0/1:228:126,101:126:4516:101:3572:-253.035,0,-337.953	0/1:45:19,26:19:680:26:928:-70.2919,0,-47.9828	0/1:297:158,139:158:5668:139:4972:-358.223,0,-420.832	0/0:157:157,0:157:5616:0:0:0,-47.2617,-505.549	0/1:91:44,47:44:1562:47:1680:-124.093,0,-113.476	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/0:15:14,0:14:504:0:0:0,-4.21442,-45.3383	0/1:12:10,2:10:360:2:72:-3.22436,0,-29.1319	0/0:43:42,1:42:1504:1:36:0,-9.34601,-132.056	0/1:193:92,101:92:3283:101:3578:-264.131,0,-237.591	0/0:100:98,2:98:3503:2:72:0,-23.2663,-308.643	0/1:118:59,59:59:2116:59:2086:-152.488,0,-155.187	0/1:6:2,4:2:72:4:140:-11.1384,0,-5.03054	0/1:161:78,83:78:2796:83:2969:-218.977,0,-203.414	0/1:63:35,28:35:1256:28:992:-70.6295,0,-94.3804	0/1:219:110,109:110:3948:109:3868:-282.391,0,-289.585	0/1:73:43,30:43:1536:30:1044:-72.2917,0,-116.558	0/1:77:40,37:40:1427:37:1309:-94.9302,0,-105.547	0/0:140:140,0:140:5020:0:0:0,-42.1442,-451.946	0/0:132:132,0:132:4736:0:0:0,-39.736,-426.292	0/0:164:155,9:155:5539:9:324:0,-19.8631,-469.13	0/1:90:34,56:34:1215:56:1988:-152.102,0,-82.5631	0/1:194:93,101:93:3321:101:3592:-265.089,0,-240.707	0/0:148:148,0:148:5296:0:0:0,-44.5524,-476.283	0/1:21:6,15:6:216:15:540:-42.6149,0,-13.4689	0/0:200:199,1:199:7148:1:36:0,-56.6077,-639.776	0/0:99:99,0:99:3552:0:0:0,-29.802,-319.888	0/1:36:23,13:23:828:13:460:-30.8983,0,-64.007	0/1:180:72,108:72:2588:108:3841:-291.703,0,-178.983	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:18:4,14:4:144:14:496:-39.5557,0,-7.89508	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.939	0/1:119:43,76:43:1544:76:2700:-207.423,0,-103.431	0/1:195:106,89:106:3780:89:3133:-223.497,0,-281.696	0/1:17:4,13:4:144:13:468:-37.3421,0,-8.19611	0/0:156:156,0:156:5579:0:0:0,-46.9607,-502.23	0/1:186:87,99:87:3115:99:3498:-259.041,0,-224.455	0/1:103:63,40:63:2249:40:1424:-97.4514,0,-171.665	0/0:115:115,0:115:4128:0:0:0,-34.6184,-371.703	0/1:162:81,81:81:2895:81:2896:-212.109,0,-212.019	0/1:215:71,144:71:2536:144:5132:-397.303,0,-163.77	0/0:160:160,0:160:5726:0:0:0,-48.1648,-515.453	0/0:96:96,0:96:3440:0:0:0,-28.8989,-309.813	0/1:59:35,24:35:1256:24:864:-60.3218,0,-95.5845	0/1:32:15,17:15:536:17:600:-44.6962,0,-38.8552	0/1:197:100,97:100:3600:97:3454:-251.771,0,-264.902	0/1:97:46,51:46:1652:51:1808:-133.802,0,-119.769	0/1:249:115,133:115:4080:133:4712:-349.226,0,-292.372	0/0:214:212,1:212:7593:1:36:0,-60.8809,-679.808	0/0:114:112,2:112:4009:2:68:0,-27.8597,-354.54	0/1:151:77,74:77:2760:74:2632:-191.673,0,-203.186	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:146:146,0:146:5211:0:0:0,-43.9504,-469.129	0/1:138:69,69:69:2460:69:2463:-180.382,0,-180.113	0/1:150:79,71:79:2844:71:2528:-182.618,0,-211.043	0/1:62:37,25:37:1324:25:900:-62.6572,0,-100.798	0/0:129:128,0:128:4600:0:0:0,-38.5318,-413.803	0/1:55:29,26:29:1044:26:924:-66.921,0,-77.7182	0/0:128:127,0:127:4549:0:0:0,-38.2308,-409.254	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:80:38,42:38:1360:42:1476:-109.049,0,-98.6182	0/0:113:112,0:112:4032:0:0:0,-33.7154,-362.706	0/0:178:178,0:178:6386:0:0:0,-53.5833,-574.826	0/1:311:158,151:158:5663:151:5322:-385.741,0,-415.92	0/1:92:25,67:25:900:67:2345:-183.614,0,-53.6263	0/0:161:161,0:161:5780:0:0:0,-48.4658,-520.313	0/0:106:106,0:106:3808:0:0:0,-31.9092,-342.916
chr09	1934481	.	C	A	39340.8	PASS	AB=0.512503;ABP=9.14607;AC=57;AF=0.303191;AN=188;AO=2329;CIGAR=1X;DP=7580;DPB=7580;DPRA=1.20675;EPP=5060.37;EPPR=11394.6;GTI=1;LEN=1;MEANALT=1.03077;MQM=59.9944;MQMR=59.9964;NS=94;NUMALT=1;ODDS=0.915719;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=83242;QR=187643;RO=5246;RPL=0;RPP=5060.37;RPPR=11299.2;RPR=2329;RUN=1;SAF=0;SAP=5060.37;SAR=2329;SRF=11;SRP=11299.2;SRR=5235;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:43,20:43:1544:20:703:-44.6286,0,-120.288	0/0:56:56,0:56:1995:0:0:0,-16.8577,-179.823	0/0:178:178,0:178:6336:0:0:0,-53.5833,-570.333	0/0:171:170,1:170:6093:1:36:0,-47.8779,-544.87	0/1:41:17,24:17:608:24:855:-64.9279,0,-42.7098	0/1:16:5,11:5:180:11:396:-31.1663,0,-11.7356	0/0:14:14,0:14:489:0:0:0,-4.21442,-44.3389	0/1:86:36,50:36:1276:50:1779:-134.504,0,-89.2545	0/1:57:30,25:30:1076:25:882:-62.7803,0,-80.2365	0/1:58:31,27:31:1112:27:968:-69.9776,0,-82.9316	0/1:65:26,39:26:928:39:1400:-106.732,0,-64.2713	0/0:84:84,0:84:2999:0:0:0,-25.2865,-270.142	0/1:73:42,31:42:1500:31:1107:-77.965,0,-113.319	0/1:108:56,52:56:2008:52:1844:-133.727,0,-148.482	0/1:61:38,23:38:1343:23:828:-56.4813,0,-102.807	0/1:61:22,39:22:792:39:1384:-106.496,0,-53.2428	0/1:31:17,14:17:608:14:500:-36.0042,0,-45.7201	0/0:39:39,0:39:1392:0:0:0,-11.7402,-125.579	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:137:51,86:51:1828:86:3074:-235.646,0,-123.56	0/1:107:51,56:51:1832:56:2004:-148.423,0,-132.951	0/1:146:56,90:56:2007:90:3211:-245.263,0,-136.952	0/0:118:118,0:118:4212:0:0:0,-35.5215,-379.259	0/1:47:28,19:28:989:19:684:-47.7419,0,-75.1736	0/0:83:81,2:81:2904:2:72:0,-18.1488,-254.759	0/1:211:104,107:104:3736:107:3839:-282.187,0,-272.922	0/1:192:85,107:85:3044:107:3827:-286.829,0,-216.392	0/1:27:16,11:16:576:11:396:-27.8549,0,-44.0472	0/1:210:96,114:96:3428:114:4083:-304.437,0,-245.518	0/0:90:90,0:90:3204:0:0:0,-27.0927,-288.582	0/1:76:35,41:35:1248:41:1468:-109.538,0,-89.7466	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/1:143:81,60:81:2897:60:2152:-151.142,0,-218.159	0/0:125:125,0:125:4464:0:0:0,-37.6287,-401.929	0/1:64:32,32:32:1143:32:1140:-83.6433,0,-83.9128	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:86:48,38:48:1728:38:1360:-96.812,0,-129.917	0/1:27:16,11:16:561:11:387:-27.0381,0,-42.6893	0/1:142:78,64:78:2804:64:2289:-163.523,0,-209.853	0/1:42:20,22:20:716:22:780:-57.8798,0,-52.1245	0/1:56:27,29:27:955:29:1044:-77.4171,0,-69.4072	0/0:122:122,0:122:4373:0:0:0,-36.7257,-393.741	0/0:133:133,0:133:4758:0:0:0,-40.037,-428.377	0/0:210:208,2:208:7425:2:72:0,-56.3796,-661.46	0/1:77:36,41:36:1288:41:1464:-108.877,0,-93.0443	0/1:113:49,64:49:1749:64:2266:-170.179,0,-123.676	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.311	0/1:11:4,7:4:144:7:244:-18.9881,0,-10.0023	0/0:164:164,0:164:5863:0:0:0,-49.3689,-527.782	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/1:153:45,108:45:1616:108:3863:-301.806,0,-99.6724	0/1:32:18,14:18:644:14:500:-35.7032,0,-48.6576	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:66:37,29:37:1305:29:1044:-74.4068,0,-97.8814	0/1:110:49,61:49:1756:61:2164:-161.911,0,-125.211	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/0:151:151,0:151:5365:0:0:0,-45.4555,-482.983	0/1:130:63,67:63:2256:67:2408:-177.84,0,-164.169	0/1:67:49,18:49:1751:18:640:-37.7603,0,-137.704	0/0:88:87,1:87:3124:1:36:0,-22.8924,-277.787	0/1:71:43,28:43:1544:28:1008:-69.6632,0,-117.88	0/1:139:34,105:34:1224:105:3772:-297.835,0,-68.6239	0/0:47:47,0:47:1679:0:0:0,-14.1484,-151.396	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:45:26,19:26:928:19:665:-46.6273,0,-70.2919	0/1:20:12,8:12:424:8:288:-20.2468,0,-32.4758	0/1:144:60,84:60:2156:84:3011:-227.872,0,-150.959	0/1:65:37,28:37:1332:28:1004:-71.1089,0,-100.615	0/1:88:50,38:50:1788:38:1360:-96.21,0,-134.712	0/0:131:131,0:131:4687:0:0:0,-39.4349,-421.99	0/0:179:177,2:177:6347:2:68:0,-47.4267,-564.861	0/1:56:31,25:31:1116:25:891:-63.6511,0,-83.894	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:83:83,0:83:2965:0:0:0,-24.9855,-267.082	0/1:142:82,60:82:2935:60:2152:-151.201,0,-221.637	0/1:148:81,67:81:2916:67:2399:-171.614,0,-218.122	0/1:43:22,21:22:773:21:756:-55.4229,0,-56.939	0/0:99:98,1:98:3498:1:36:0,-26.2037,-311.432	0/1:40:18,22:18:644:22:775:-58.0294,0,-46.2494	0/0:95:92,3:92:3291:3:104:0,-18.895,-286.706	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:77:37,40:37:1324:40:1436:-106.358,0,-96.2828	0/0:86:86,0:86:3068:0:0:0,-25.8886,-276.35	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.071	0/1:150:79,71:79:2828:71:2536:-183.337,0,-209.604	0/1:57:25,32:25:896:32:1140:-85.7505,0,-63.8016	0/0:92:91,0:91:3268:0:0:0,-27.3937,-294.019	0/0:90:89,1:89:3192:1:36:0,-23.4944,-283.905
chr09	1934527	.	G	A	39331.4	PASS	AB=0.508374;ABP=5.77417;AC=57;AF=0.303191;AN=188;AO=2319;CIGAR=1X;DP=7615;DPB=7615;DPRA=1.15229;EPP=5038.65;EPPR=11498.8;GTI=1;LEN=1;MEANALT=1.03125;MQM=59.9961;MQMR=59.9964;NS=94;NUMALT=1;ODDS=1.431;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=83180;QR=189812;RO=5294;RPL=2319;RPP=5038.65;RPPR=11498.8;RPR=0;RUN=1;SAF=0;SAP=5038.65;SAR=2319;SRF=0;SRP=11498.8;SRR=5294;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:43,19:43:1544:19:676:-42.5041,0,-120.589	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:185:185,0:185:6620:0:0:0,-55.6905,-595.88	0/0:177:177,0:177:6320:0:0:0,-53.2823,-568.894	0/1:41:17,24:17:612:24:860:-65.3796,0,-43.0712	0/1:16:5,11:5:180:11:392:-30.8036,0,-11.7356	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:87:36,51:36:1276:51:1832:-138.971,0,-88.9535	0/1:55:30,25:30:1076:25:892:-64.043,0,-80.5962	0/1:55:28,27:28:1008:27:968:-70.8807,0,-74.4797	0/1:63:25,38:25:900:38:1364:-104.096,0,-62.3561	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.072	0/1:74:43,31:43:1532:31:1116:-78.4755,0,-115.897	0/1:109:58,51:58:2080:51:1817:-130.997,0,-154.658	0/1:60:37,23:37:1332:23:824:-56.4215,0,-102.121	0/1:61:23,38:23:824:38:1368:-105.058,0,-56.1205	0/1:32:18,14:18:644:14:504:-36.0651,0,-48.6576	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.27	0/1:135:50,85:50:1796:85:3052:-234.27,0,-121.283	0/1:109:53,56:53:1904:56:2008:-148.181,0,-138.825	0/1:147:56,91:56:2012:91:3268:-250.088,0,-137.102	0/0:117:117,0:117:4196:0:0:0,-35.2205,-377.821	0/1:47:27,20:27:968:20:716:-50.6193,0,-73.289	0/0:84:83,1:83:2976:1:36:0,-21.6882,-264.474	0/1:211:109,102:109:3901:102:3668:-266.805,0,-287.765	0/1:194:86,107:86:3088:107:3836:-286.977,0,-219.689	0/1:28:17,11:17:612:11:396:-27.5539,0,-46.9846	0/1:211:95,116:95:3408:116:4168:-311.783,0,-243.417	0/0:92:92,0:92:3300:0:0:0,-27.6948,-297.218	0/1:79:37,42:37:1328:42:1504:-111.873,0,-96.0409	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:146:84,62:84:3008:62:2228:-156.833,0,-227.001	0/0:126:126,0:126:4516:0:0:0,-37.9298,-406.607	0/1:63:33,30:33:1188:30:1076:-78.188,0,-88.2637	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:87:47,40:47:1676:40:1436:-103.348,0,-124.938	0/1:26:16,10:16:572:10:356:-24.5545,0,-43.9866	0/1:149:82,66:82:2944:66:2360:-167.746,0,-220.281	0/1:41:20,21:20:720:21:752:-55.664,0,-52.7865	0/1:54:27,27:27:968:27:968:-71.1817,0,-71.1817	0/0:115:114,1:114:4073:1:36:0,-31.0202,-363.157	0/0:136:136,0:136:4864:0:0:0,-40.9401,-437.914	0/0:209:207,2:207:7412:2:72:0,-56.0785,-660.289	0/1:80:38,42:38:1368:42:1508:-111.932,0,-99.3384	0/1:110:48,62:48:1728:62:2220:-166.951,0,-122.692	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.311	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/0:160:160,0:160:5740:0:0:0,-48.1648,-516.715	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/1:12:5,7:5:176:7:252:-19.4166,0,-12.5727	0/1:152:48,104:48:1724:104:3712:-288.525,0,-109.689	0/1:33:19,14:19:684:14:500:-35.4022,0,-51.9563	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:66:37,29:37:1328:29:1044:-74.4068,0,-99.9543	0/1:109:48,61:48:1728:61:2192:-164.733,0,-122.993	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/0:152:152,0:152:5460:0:0:0,-45.7566,-491.526	0/1:131:62,69:62:2224:69:2476:-183.656,0,-160.989	0/1:67:49,18:49:1756:18:643:-38.0312,0,-138.155	0/0:90:89,1:89:3196:1:36:0,-23.4944,-284.264	0/1:72:43,29:43:1548:29:1040:-72.2402,0,-117.939	0/1:138:34,104:34:1216:104:3736:-294.897,0,-68.2044	0/0:45:45,0:45:1608:0:0:0,-13.5463,-145.01	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/1:43:25,18:25:900:18:644:-45.3463,0,-68.3767	0/1:22:12,10:12:432:10:348:-25.0325,0,-32.5985	0/1:144:62,82:62:2217:82:2940:-221.486,0,-156.444	0/1:66:39,27:39:1400:27:968:-67.5694,0,-106.431	0/1:91:53,38:53:1904:38:1360:-95.3069,0,-144.244	0/0:131:131,0:131:4700:0:0:0,-39.4349,-423.159	0/0:180:177,3:177:6348:3:108:0,-44.1102,-561.334	0/1:57:31,26:31:1112:26:932:-67.0402,0,-83.2326	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:88:88,0:88:3160:0:0:0,-26.4906,-284.624	0/1:143:83,60:83:2976:60:2160:-151.619,0,-225.025	0/1:151:82,69:82:2936:69:2476:-177.638,0,-219.019	0/1:45:24,21:24:860:21:756:-54.8209,0,-64.1693	0/0:101:100,1:100:3596:1:36:0,-26.8058,-320.247	0/1:40:18,22:18:648:22:792:-59.5645,0,-46.6107	0/0:96:93,3:93:3317:3:108:0,-18.8237,-288.672	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/1:77:37,40:37:1324:40:1440:-106.718,0,-96.2828	0/0:86:86,0:86:3076:0:0:0,-25.8886,-277.069	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.071	0/1:148:79,69:79:2840:69:2484:-179.26,0,-211.285	0/1:57:25,32:25:896:32:1144:-86.1108,0,-63.8016	0/0:93:93,0:93:3340:0:0:0,-27.9958,-300.816	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.503
chr09	2179265	.	A	G,C	189502	PASS	AB=0.579846,0.415884;ABP=197.547,218.91;AC=137,51;AF=0.728723,0.271277;AN=188;AO=5671,1474;CIGAR=1X,1X;DP=7172;DPB=7172;DPRA=0,0.837323;EPP=1974.36,3.03387;EPPR=16.5402;GTI=0;LEN=1,1;MEANALT=1.78723,2.11475;MQM=59.9847,59.9763;MQMR=59.3846;NS=94;NUMALT=2;ODDS=9.19329;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=199026,51959;QR=468;RO=13;RPL=5611,1463;RPP=11801.8,3108.93;RPPR=31.2394;RPR=60,11;RUN=1,1;SAF=1643,728;SAP=2181.08,3.48761;SAR=4028,746;SRF=2;SRP=16.5402;SRR=11;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:17:0,9,8:0:0:9,8:320,288:-49.9345,-23.8592,-21.1499,-26.4331,0,-24.0248	1/1:30:0,30,0:0:0:30,0:1050,0:-94.8088,-9.0309,0,-94.8088,-9.0309,-94.8088	1/1:40:0,40,0:0:0:40,0:1402,0:-126.476,-12.0412,0,-126.476,-12.0412,-126.476	1/1:34:0,34,0:0:0:34,0:1186,0:-107.043,-10.235,0,-107.043,-10.235,-107.043	1/2:27:0,13,14:0:0:13,14:450,495:-77.2347,-40.6686,-36.7552,-36.9157,0,-32.7013	1/2:13:0,6,7:0:0:6,7:212,248:-37.822,-20.557,-18.7508,-17.6186,0,-15.5114	1/1:41:0,40,1:0:0:40,1:1368,36:-123.055,-12.0412,0,-120.117,-8.74396,-119.816	1/2:25:0,11,14:0:0:11,14:372,471:-68.6504,-38.4944,-35.183,-30.4934,0,-26.2789	1/2:24:0,9,15:0:0:9,15:324,536:-70.4834,-44.0456,-41.3363,-26.7966,0,-22.2811	1/2:22:0,14,8:0:0:14,8:492,275:-62.7268,-22.6752,-18.4608,-40.3979,0,-37.9897	1/2:263:0,217,46:0:0:217,46:7544,1614:-745.03,-131.7,-66.3767,-613.68,0,-599.833	1/1:105:0,105,0:0:0:105,0:3733,0:-336.171,-31.6082,0,-336.171,-31.6082,-336.171	1/2:113:0,58,55:0:0:58,55:2046,1949:-325.725,-159.127,-141.668,-166.951,0,-150.394	1/2:114:0,46,68:0:0:46,68:1596,2395:-325.039,-195.334,-181.487,-130.054,0,-109.584	1/2:68:0,35,33:0:0:35,33:1234,1165:-195.695,-95.221,-84.685,-100.827,0,-90.8926	1/2:125:0,70,55:0:0:70,55:2468,1954:-360.525,-159.578,-138.506,-201.301,0,-184.744	1/2:111:0,59,52:0:0:59,52:2074,1847:-319.669,-150.856,-133.095,-169.167,0,-153.513	1/1:97:0,97,0:0:0:97,0:3432,0:-309.094,-29.1999,0,-309.094,-29.1999,-309.094	1/1:230:1,228,0:1:36:228,0:8028,0:-718.954,-65.6974,0,-719.255,-68.6348,-722.192	1/2:40:0,25,15:0:0:25,15:861,532:-113.624,-43.6976,-36.1719,-70.2766,0,-65.7611	1/2:27:0,6,21:0:0:6,21:208,752:-78.2703,-61.366,-59.5599,-17.2529,0,-10.9313	1/2:7:0,3,4:0:0:3,4:88,144:-19.0957,-12.1095,-11.2064,-7.30795,0,-6.10383	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:26:0,14,12:0:0:14,12:500,432:-76.3721,-35.6088,-31.3944,-41.1218,0,-37.5094	1/1:14:0,14,0:0:0:14,0:483,0:-43.7973,-4.21442,0,-43.7973,-4.21442,-43.7973	1/2:50:0,20,30:0:0:20,30:707,1068:-144.981,-87.4012,-81.3806,-57.934,0,-48.9031	1/2:57:0,37,20:0:0:37,20:1312,697:-163.923,-57.0301,-45.892,-107.244,0,-101.223	1/2:47:0,22,25:0:0:22,25:774,896:-136.437,-73.4346,-66.8119,-63.3576,0,-55.8318	1/2:34:1,15,18:1:36:15,18:514,615:-88.3773,-46.952,-45.3749,-38.7711,0,-36.2911	1/2:12:0,7,5:0:0:7,5:248,180:-35.2464,-15.0469,-12.9397,-20.557,0,-19.0518	1/2:23:0,14,9:0:0:14,9:500,315:-66.7471,-25.978,-21.7635,-41.1218,0,-38.4125	1/1:77:0,75,1:0:0:75,1:2617,31:-235.442,-22.5773,0,-232.954,-20.1137,-232.653	1/1:76:0,76,0:0:0:76,0:2644,0:-238.206,-22.8783,0,-238.206,-22.8783,-238.206	1/1:122:0,121,0:0:0:121,0:4257,0:-382.955,-36.4246,0,-382.955,-36.4246,-382.955	1/1:106:0,103,3:0:0:103,3:3646,104:-328,-31.0061,0,-319.547,-22.2064,-318.644	1/1:92:0,92,0:0:0:92,0:3225,0:-290.476,-27.6948,0,-290.476,-27.6948,-290.476	1/2:211:0,105,106:0:0:105,106:3709,3757:-608.47,-306.42,-274.811,-302.404,0,-270.495	1/1:10:0,10,0:0:0:10,0:335,0:-30.4745,-3.0103,0,-30.4745,-3.0103,-30.4745	1/2:275:0,210,63:0:0:210,63:7413,2223:-784.662,-181.007,-117.791,-603.647,0,-584.682	1/1:35:0,34,1:0:0:34,1:1208,36:-108.666,-10.235,0,-105.729,-6.93778,-105.428	1/2:48:0,23,24:0:0:23,24:803,860:-135.449,-70.1374,-63.2137,-65.3053,0,-58.0806	1/2:145:3,110,32:3:108:110,32:3905,1118:-399.399,-82.121,-57.8208,-309.36,0,-308.539	1/2:37:0,19,18:0:0:19,18:662,644:-106.702,-52.8721,-47.1525,-54.1828,0,-48.7643	1/2:116:0,50,66:0:0:50,66:1719,2312:-328.063,-188.472,-173.421,-139.937,0,-120.069	1/2:61:0,30,31:0:0:30,31:1053,1061:-172.161,-86.4599,-77.429,-86.0477,0,-76.7157	1/1:24:0,24,0:0:0:24,0:856,0:-77.3611,-7.22472,0,-77.3611,-7.22472,-77.3611	1/1:9:0,9,0:0:0:9,0:320,0:-29.1424,-2.70927,0,-29.1424,-2.70927,-29.1424	1/1:47:0,47,0:0:0:47,0:1637,0:-147.615,-14.1484,0,-147.615,-14.1484,-147.615	1/2:21:0,12,9:0:0:12,9:432,312:-60.9627,-25.7061,-22.0937,-35.6088,0,-32.8996	1/2:35:0,14,21:0:0:14,21:500,756:-102.809,-62.0456,-57.8312,-41.1218,0,-34.8001	1/1:25:0,25,0:0:0:25,0:870,0:-78.6146,-7.52575,0,-78.6146,-7.52575,-78.6146	1/1:84:0,84,0:0:0:84,0:2932,0:-264.117,-25.2865,0,-264.117,-25.2865,-264.117	1/1:42:0,41,0:0:0:41,0:1423,0:-128.003,-12.3422,0,-128.003,-12.3422,-128.003	1/1:10:0,10,0:0:0:10,0:326,0:-29.6557,-3.0103,0,-29.6557,-3.0103,-29.6557	1/1:26:0,25,1:0:0:25,1:883,36:-79.4279,-7.52575,0,-76.4902,-4.22851,-76.1892	1/2:29:0,19,10:0:0:19,10:672,360:-84.4636,-29.734,-24.0144,-55.0873,0,-52.077	1/2:15:0,10,5:0:0:10,5:347,180:-43.2447,-15.0469,-12.0366,-28.5533,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chr09	2289524	.	AGGCGGCGGT	AGGCGGT,AGGCGGTGGT	321643	PASS	AB=0.510433,0.485321;ABP=18.8242,34.3108;AC=93,95;AF=0.494681,0.505319;AN=188;AO=8563,8384;CIGAR=1M3D6M,6M1X3M;DP=17018;DPB=14437.4;DPRA=0,0;EPP=18597.3,18208.6;EPPR=24.725;GTI=1;LEN=3,1;MEANALT=2.55319,2.55319;MQM=59.9716,59.9777;MQMR=60;NS=94;NUMALT=2;ODDS=47.4991;PAIRED=0,0;PAIREDR=0;PAO=0.333333,0.333333;PQA=9.33333,9.33333;PQR=9.33333;PRO=0.333333;QA=286973,297480;QR=356;RO=10;RPL=12,8383;RPP=18493.2,18200;RPPR=24.725;RPR=8551,1;RUN=1,1;SAF=12,8383;SAP=18493.2,18200;SAR=8551,1;SRF=10;SRP=24.725;SRR=0;TYPE=del,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:83:0,25,58:0:0:25,58:823,2071:-235.709,-169.2,-161.675,-66.8463,0,-49.3865	1/2:208:0,95,113:0:0:95,113:3210,3978:-584.379,-324.194,-295.596,-260.529,0,-226.513	1/2:235:0,97,137:0:0:97,137:3212,4876:-657.159,-397.392,-368.192,-259.749,0,-218.508	1/2:290:0,136,152:0:0:136,152:4505,5411:-805.457,-441.105,-400.165,-364.437,0,-318.681	1/2:58:0,37,21:0:0:37,21:1237,743:-161.013,-60.8713,-49.7332,-100.489,0,-94.167	1/2:93:0,49,44:0:0:49,44:1646,1533:-258.342,-125.012,-110.261,-133.673,0,-120.427	1/2:282:0,178,103:0:0:178,103:6000,3620:-780.842,-294.638,-241.055,-486.19,0,-455.184	1/2:262:0,116,146:0:0:116,146:3941,5187:-742.647,-423.021,-388.101,-319.973,0,-276.022	1/2:235:0,133,100:0:0:133,100:4415,3547:-646.185,-289.024,-248.987,-357.195,0,-327.092	1/2:180:0,119,60:0:0:119,60:4005,2134:-498.375,-173.905,-138.083,-324.459,0,-306.397	1/2:136:0,80,56:0:0:80,56:2661,1975:-376.456,-161.164,-137.082,-215.636,0,-198.778	1/2:196:0,82,114:0:0:82,114:2705,4028:-547.066,-328.394,-303.709,-219.012,0,-184.695	1/2:169:0,78,91:0:0:78,91:2578,3235:-472.427,-263.979,-240.499,-208.79,0,-181.396	1/2:182:0,91,91:0:0:91,91:3024,3232:-508.366,-263.708,-236.314,-245.002,0,-217.608	1/2:144:0,67,77:0:0:67,77:2216,2743:-403.12,-223.933,-203.764,-179.53,0,-156.35	1/2:128:0,38,90:0:0:38,90:1278,3188:-363.582,-260.051,-248.612,-103.872,0,-76.7794	1/2:128:0,93,33:0:0:93,33:3027,1171:-339.729,-95.4032,-67.4074,-244.313,0,-234.379	1/2:131:0,83,48:0:0:83,48:2750,1711:-362.238,-139.826,-114.84,-222.759,0,-208.31	1/2:85:0,32,53:0:0:32,53:1046,1884:-238.351,-153.884,-144.251,-84.8044,0,-68.8498	1/2:345:0,206,138:0:0:206,138:6995,4914:-967.857,-400.57,-338.558,-567.335,0,-525.793	1/2:238:0,113,119:0:0:113,119:3751,4203:-645.759,-342.319,-308.303,-303.47,0,-267.647	1/2:184:0,125,59:0:0:125,59:4219,2093:-512.804,-170.877,-133.249,-342.275,0,-324.514	1/2:172:0,89,83:0:0:89,83:2983,2954:-482.674,-241.108,-214.316,-241.912,0,-216.927	1/2:184:0,132,51:0:0:132,51:4320,1832:-498.377,-149.468,-109.732,-348.919,0,-333.566	1/2:176:0,107,69:0:0:107,69:3579,2432:-488.08,-198.312,-166.101,-290.062,0,-269.291	1/2:459:0,246,210:0:0:246,210:8239,7475:-1276.44,-609.289,-535.236,-667.203,0,-603.986	1/2:522:0,253,268:0:0:253,268:8552,9496:-1466.79,-773.567,-697.406,-693.207,0,-612.531	1/2:71:1,39,31:1:36:39,31:1286,1083:-188.783,-85.1324,-76.3299,-100.995,0,-94.6012	1/2:415:0,237,176:0:0:237,176:8056,6229:-1160.63,-507.221,-435.877,-653.52,0,-600.539	1/2:239:0,107,132:0:0:107,132:3608,4683:-674.27,-381.896,-349.686,-292.718,0,-252.982	1/2:192:0,114,77:0:0:114,77:3839,2672:-528.232,-217.178,-182.861,-311.037,0,-287.858	1/2:19:0,8,11:0:0:8,11:275,387:-54.1828,-31.8546,-29.4464,-22.6752,0,-19.3639	1/2:23:0,7,16:0:0:7,16:244,576:-67.1988,-47.3585,-45.2513,-20.1922,0,-15.3757	1/2:14:0,5,9:0:0:5,9:172,324:-40.7598,-26.7966,-25.2914,-14.3128,0,-11.6036	1/2:25:0,10,15:0:0:10,15:336,523:-70.0977,-42.883,-39.8727,-27.5557,0,-23.0402	1/2:28:0,10,18:0:0:10,18:327,635:-78.4604,-52.0584,-49.0481,-26.738,0,-21.3195	1/2:440:0,241,198:0:0:241,198:8012,7042:-1222.16,-573.919,-501.371,-648.263,0,-588.659	1/2:125:0,66,58:0:0:66,58:2257,2076:-352.502,-169.33,-149.462,-183.201,0,-165.742	1/2:137:0,58,78:0:0:58,78:1956,2763:-383.578,-225.07,-207.61,-158.493,0,-135.013	1/2:9:0,7,2:0:0:7,2:248,72:-26.4331,-6.23466,-4.12745,-20.557,0,-19.9549	1/2:271:1,186,84:1:34:186,84:6211,2957:-740.456,-237.98,-184.747,-500.025,0,-477.496	1/2:90:0,42,48:0:0:42,48:1424,1679:-252.407,-136.943,-124.3,-115.808,0,-101.359	1/2:298:0,98,198:0:0:98,198:3296,7075:-843.87,-576.848,-547.347,-267.006,0,-207.403	1/2:145:1,90,54:1:34:90,54:2996,1914:-395.311,-153.182,-128.847,-239.678,0,-226.181	1/2:115:0,71,44:0:0:71,44:2334,1506:-311.187,-122.58,-101.207,-188.944,0,-175.699	1/2:153:1,56,96:1:36:56,96:1904,3409:-428.958,-274.829,-260.908,-151.479,0,-125.518	1/2:201:0,75,124:0:0:75,124:2498,4383:-559.112,-356.959,-334.381,-202.135,0,-164.807	1/2:339:0,160,179:0:0:160,179:5393,6351:-954.808,-517.795,-469.631,-437.358,0,-383.473	1/2:179:0,99,80:0:0:99,80:3335,2823:-500.43,-230.2,-200.398,-270.575,0,-246.493	1/2:286:0,135,151:0:0:135,151:4591,5415:-814.406,-442.023,-401.384,-372.732,0,-327.276	1/2:288:0,168,119:0:0:168,119:5689,4211:-804.214,-342.988,-292.415,-461.214,0,-425.392	1/2:29:0,10,19:0:0:10,19:339,684:-83.6519,-56.1708,-53.1605,-27.8272,0,-22.1076	1/2:243:0,102,138:0:0:102,138:3423,4918:-678.125,-400.883,-370.178,-277.239,0,-235.697	1/2:104:0,29,75:0:0:29,75:987,2675:-298.478,-218.418,-209.688,-80.4049,0,-57.8277	1/2:47:0,29,18:0:0:29,18:1000,635:-133.286,-52.0584,-43.3286,-81.5773,0,-76.1588	1/2:183:0,106,76:0:0:106,76:3547,2687:-506.118,-218.926,-187.017,-287.286,0,-264.407	1/2:98:0,53,42:0:0:53,42:1802,1487:-267.287,-121.133,-105.179,-146.155,0,-133.511	1/2:14:0,3,11:0:0:3,11:85,392:-39.021,-32.291,-31.3879,-7.02891,0,-3.71758	1/2:46:3,15,27:3:108:15,27:515,972:-111.405,-70.498,-74.7948,-32.9885,0,-33.6754	1/2:203:0,105,96:0:0:105,96:3529,3368:-560.011,-274.137,-242.528,-285.917,0,-257.018	1/2:223:0,110,112:0:0:110,112:3754,3967:-627.826,-323.216,-290.102,-304.668,0,-270.952	1/2:11:0,3,8:0:0:3,8:104,288:-32.3087,-23.8592,-22.9561,-8.79971,0,-6.39147	1/2:318:0,189,127:0:0:189,127:6390,4500:-884.571,-366.602,-309.708,-517.981,0,-479.751	1/2:256:0,91,165:0:0:91,165:3053,5857:-724.837,-477.571,-450.177,-247.609,0,-197.939	1/2:150:0,63,87:0:0:63,87:2131,3082:-424.166,-251.42,-232.455,-173.091,0,-146.901	1/2:162:0,75,87:0:0:75,87:2544,3111:-460.308,-254.027,-231.45,-206.629,0,-180.439	1/2:250:0,139,111:0:0:139,111:4668,3945:-699.926,-321.815,-279.972,-378.458,0,-345.044	2/2:293:0,26,267:0:0:26,267:884,9468:-851.733,-780.032,-772.205,-80.375,-8.33289,0	1/2:140:0,44,94:0:0:44,94:1496,3334:-392.962,-271.622,-258.377,-121.325,0,-93.028	1/2:96:0,35,61:0:0:35,61:1178,2192:-274.619,-179.183,-168.647,-95.781,0,-77.4181	1/2:143:0,93,50:0:0:93,50:3073,1792:-394.97,-146.511,-118.515,-248.808,0,-233.756	1/2:41:0,18,23:0:0:18,23:623,820:-117.823,-67.1988,-61.7803,-50.9746,0,-44.0509	1/2:232:0,90,140:0:0:90,140:3030,4988:-652.062,-406.566,-379.473,-245.483,0,-203.339	1/2:230:0,92,138:0:0:92,138:3101,4918:-652.456,-401.173,-373.478,-251.628,0,-210.086	1/2:288:0,151,137:0:0:151,137:5066,4860:-806.591,-396.3,-350.844,-410.637,0,-369.396	1/2:212:0,135,74:0:0:135,74:4544,2639:-583.292,-215.14,-174.501,-368.162,0,-345.885	1/2:208:0,102,105:0:0:102,105:3416,3742:-581.622,-305.013,-274.308,-276.595,0,-244.987	1/2:232:0,144,88:0:0:144,88:4804,3142:-645.082,-256.514,-213.166,-388.915,0,-362.425	1/2:34:0,20,14:0:0:20,14:703,496:-97.9798,-40.7598,-34.7392,-57.5729,0,-53.3585	1/2:231:0,130,100:0:0:130,100:4358,3555:-642.644,-289.714,-250.58,-352.937,0,-322.834	1/2:215:0,134,81:0:0:134,81:4522,2896:-602.951,-236.472,-196.134,-366.829,0,-342.446	1/2:368:0,142,222:0:0:142,222:4769,7847:-1025.36,-639.064,-596.318,-386.276,0,-319.447	1/2:155:0,97,58:0:0:97,58:3273,2041:-431.751,-166.501,-137.301,-265.597,0,-248.137	1/2:178:0,93,85:0:0:93,85:3080,3026:-496.081,-246.983,-218.987,-249.442,0,-223.854	1/2:162:0,121,41:0:0:121,41:4000,1455:-442.336,-118.903,-82.4784,-323.781,0,-311.439	1/2:262:1,131,129:1:36:131,129:4338,4583:-721.044,-370.506,-334.008,-347.886,0,-311.99	1/2:64:0,39,25:0:0:39,25:1292,879:-176.388,-71.901,-60.1609,-104.831,0,-97.3049	1/2:168:0,97,71:0:0:97,71:3161,2523:-461.126,-205.949,-176.749,-255.52,0,-234.147	1/2:145:1,65,79:1:36:65,79:2158,2797:-399.163,-224.889,-208.259,-171.62,0,-150.776	1/2:137:0,72,64:0:0:72,64:2366,2262:-375.392,-184.217,-162.542,-191.158,0,-171.892	1/2:240:0,96,144:0:0:96,144:3157,5104:-671.278,-416.156,-387.257,-255.462,0,-212.113	1/2:152:1,76,75:1:36:76,75:2505,2671:-416.941,-214.761,-194.82,-199.527,0,-179.887	1/2:214:0,96,117:0:0:96,117:3230,4139:-598.795,-337.115,-308.216,-261.664,0,-226.443	1/2:234:0,113,121:0:0:113,121:3771,4289:-654.993,-349.765,-315.749,-305.571,0,-269.147
chr09	2332246	.	AATG	AATA,GATA	205118	PASS	AB=0.477889,0.520268;ABP=28.3609,24.3118;AC=130,58;AF=0.691489,0.308511;AN=188;AO=6530,3113;CIGAR=3M1X,1X2M1X;DP=9664;DPB=9664;DPRA=0,1.14392;EPP=14018.2,6719.44;EPPR=5.18177;GTI=1;LEN=1,4;MEANALT=1.88298,2.1875;MQM=59.927,59.84;MQMR=60;NS=94;NUMALT=2;ODDS=0.156426;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=233932,110142;QR=29;RO=1;RPL=19,5;RPP=14018.2,6719.44;RPPR=5.18177;RPR=6511,3108;RUN=1,1;SAF=6530,3113;SAP=14182.7,6762.8;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:64:0,37,27:0:0:37,27:1332,952:-186.555,-77.866,-66.7278,-109.044,0,-100.916	1/1:77:0,77,0:0:0:77,0:2756,0:-248.264,-23.1793,0,-248.264,-23.1793,-248.264	1/1:221:0,221,0:0:0:221,0:7910,0:-711.921,-66.5276,0,-711.921,-66.5276,-711.921	1/1:207:0,206,0:0:0:206,0:7370,0:-663.081,-62.0122,0,-663.081,-62.0122,-663.081	1/2:77:0,33,44:0:0:33,44:1176,1562:-223.483,-127.626,-117.692,-96.2132,0,-82.9679	1/2:21:0,10,11:0:0:10,11:360,395:-61.9554,-32.5808,-29.5705,-29.734,0,-26.4227	1/1:85:0,85,0:0:0:85,0:3052,0:-274.909,-25.5876,0,-274.909,-25.5876,-274.909	1/2:98:0,49,49:0:0:49,49:1756,1720:-283.539,-140.321,-125.57,-143.573,0,-128.822	1/2:83:0,40,43:0:0:40,43:1425,1522:-240.475,-124.328,-112.287,-116.501,0,-103.557	1/2:87:0,37,49:0:0:37,49:1324,1734:-249.222,-141.254,-130.115,-107.984,0,-93.2332	1/2:69:0,27,42:0:0:27,42:964,1474:-198.814,-120.221,-112.093,-78.9475,0,-66.3042	1/1:137:0,137,0:0:0:137,0:4905,0:-441.599,-41.2411,0,-441.599,-41.2411,-441.599	1/2:84:0,49,35:0:0:49,35:1764,1233:-244.673,-100.735,-85.9845,-144.293,0,-133.757	1/2:53:0,24,29:0:0:24,29:864,1026:-154.423,-83.9226,-76.6979,-70.8578,0,-62.128	1/2:74:0,42,32:0:0:42,32:1512,1137:-216.373,-92.9991,-80.3559,-123.731,0,-114.098	1/2:68:0,40,28:0:0:40,28:1440,977:-197.296,-79.8031,-67.7619,-117.846,0,-109.417	1/2:27:0,16,11:0:0:16,11:576,384:-78.588,-31.5829,-26.7664,-47.3585,0,-44.0472	1/1:36:0,35,0:0:0:35,0:1260,0:-113.346,-10.5361,0,-113.346,-10.5361,-113.346	1/1:40:0,40,0:0:0:40,0:1440,0:-129.898,-12.0412,0,-129.898,-12.0412,-129.898	1/2:256:0,143,112:0:0:143,112:5125,3975:-741.889,-323.915,-280.868,-418.02,0,-384.304	1/2:168:0,58,109:0:0:58,109:2084,3872:-485.518,-315.506,-298.046,-170.01,0,-137.198	1/2:183:0,77,106:0:0:77,106:2749,3744:-529.221,-305.105,-281.926,-224.471,0,-192.562	1/1:137:0,135,1:0:0:135,1:4848,36:-436.112,-40.6391,0,-433.175,-37.7016,-432.874	1/2:100:0,42,58:0:0:42,58:1512,2046:-290.326,-166.952,-154.308,-123.731,0,-106.272	1/1:135:0,135,0:0:0:135,0:4802,0:-431.902,-40.6391,0,-431.902,-40.6391,-431.902	1/2:230:0,97,133:0:0:97,133:3454,4716:-666.015,-384.504,-355.304,-281.867,0,-241.83	1/2:257:0,137,120:0:0:137,120:4897,4272:-747.791,-348.513,-307.272,-399.634,0,-363.511	1/2:36:0,21,15:0:0:21,15:756,539:-106.017,-44.3307,-38.0091,-62.0456,0,-57.5301	1/2:322:0,156,166:0:0:156,166:5600,5832:-931.781,-474.983,-428.022,-457.153,0,-407.182	1/2:172:0,83,89:0:0:83,89:2984,3147:-500.068,-256.622,-231.636,-243.803,0,-217.011	1/2:188:0,79,107:0:0:79,107:2821,3780:-537.802,-307.829,-284.047,-229.969,0,-197.759	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/1:23:0,23,0:0:0:23,0:828,0:-74.8441,-6.92369,0,-74.8441,-6.92369,-74.8441	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:12:0,4,7:0:0:4,7:144,250:-32.2404,-20.4849,-19.2807,-11.8455,0,-9.73833	1/1:27:0,27,0:0:0:27,0:972,0:-87.7979,-8.12781,0,-87.7979,-8.12781,-87.7979	1/2:179:0,80,99:0:0:80,99:2868,3531:-522.111,-288.197,-264.115,-234.271,0,-204.469	1/1:178:0,177,1:0:0:177,1:6348,36:-571.049,-53.2823,0,-568.112,-49.9851,-567.811	1/2:58:0,30,28:0:0:30,28:1072,986:-168.002,-80.6231,-71.5922,-87.7331,0,-79.3043	1/2:9:0,6,3:0:0:6,3:216,108:-26.7966,-9.17208,-7.3659,-17.9843,0,-17.0812	1/2:152:0,77,74:0:0:77,74:2753,2642:-439.865,-215.391,-192.212,-224.471,0,-202.195	1/2:43:0,21,22:0:0:21,22:756,779:-125.497,-63.8083,-57.4867,-62.0456,0,-55.4229	1/2:202:0,106,96:0:0:106,96:3761,3365:-580.402,-273.977,-242.068,-306.777,0,-277.879	1/2:63:0,27,36:0:0:27,36:964,1283:-183.528,-104.936,-96.8078,-78.949,0,-68.1119	1/2:80:0,41,39:0:0:41,39:1476,1382:-233.376,-112.939,-100.596,-120.794,0,-109.054	1/1:131:0,128,1:0:0:128,1:4573,35:-411.42,-38.5318,0,-408.573,-35.6657,-408.272	1/1:146:0,145,1:0:0:145,1:5193,36:-467.147,-43.6494,0,-464.21,-40.3521,-463.909	1/1:178:0,176,2:0:0:176,2:6304,71:-567.085,-52.9813,0,-561.3,-46.8413,-560.698	1/2:121:0,66,55:0:0:66,55:2372,1944:-351.966,-158.452,-138.584,-193.87,0,-177.313	1/2:103:0,52,51:0:0:52,51:1860,1805:-298.885,-147.372,-131.718,-151.868,0,-136.516	1/1:158:0,157,0:0:0:157,0:5621,0:-505.755,-47.2617,0,-505.755,-47.2617,-505.755	1/2:16:0,9,7:0:0:9,7:324,234:-45.7305,-19.2793,-16.57,-26.7966,0,-24.6894	1/1:123:0,123,0:0:0:123,0:4428,0:-398.689,-37.0267,0,-398.689,-37.0267,-398.689	1/1:76:0,76,0:0:0:76,0:2732,0:-246.119,-22.8783,0,-246.119,-22.8783,-246.119	1/2:11:0,10,1:0:0:10,1:345,36:-31.3093,-3.29724,-0.286945,-28.3705,0,-28.0695	1/2:145:0,73,72:0:0:73,72:2605,2551:-420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chr09	2332276	.	G	A	132109	PASS	AB=0.48844;ABP=9.73752;AC=130;AF=0.691489;AN=188;AO=6495;CIGAR=1X;DP=9468;DPB=9468;DPRA=0;EPP=14106.7;EPPR=6450.11;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.9318;MQMR=59.9111;NS=94;NUMALT=1;ODDS=2.3843;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=232235;QR=105466;RO=2969;RPL=6495;RPP=14106.7;RPPR=6450.11;RPR=0;RUN=1;SAF=6495;SAP=14106.7;SAR=0;SRF=2969;SRP=6450.11;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:25,38:25:892:38:1364:-104.096,0,-61.6348	1/1:79:0,79:0:0:79:2840:-255.82,-23.7814,0	1/1:219:0,219:0:0:219:7829:-704.635,-65.9256,0	1/1:209:1,208:1:36:208:7387:-661.272,-59.317,0	0/1:73:41,32:41:1455:32:1133:-80.3015,0,-109.27	0/1:21:11,10:11:396:10:360:-26.4227,0,-29.6611	1/1:82:0,82:0:0:82:2942:-265.013,-24.6845,0	0/1:93:43,50:43:1528:50:1772:-131.765,0,-109.8	0/1:78:38,40:38:1349:40:1440:-106.414,0,-98.2279	0/1:84:48,36:48:1673:36:1292:-91.2972,0,-125.568	0/1:68:41,27:41:1431:27:964:-66.6052,0,-108.612	1/1:136:1,135:1:32:135:4801:-429.047,-37.7408,0	0/1:83:35,48:35:1235:48:1724:-130.46,0,-86.4504	0/1:52:28,24:28:976:24:864:-62.429,0,-72.4961	0/1:73:31,42:31:1108:42:1500:-113.319,0,-78.0496	0/1:65:24,41:24:856:41:1464:-112.485,0,-57.7942	0/1:26:10,16:10:345:16:576:-44.3482,0,-23.554	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	1/1:40:0,40:0:0:40:1436:-129.538,-12.0412,0	0/1:253:110,143:110:3929:143:5108:-383.695,0,-277.63	0/1:166:108,58:108:3840:58:2080:-137.499,0,-295.825	0/1:177:99,77:99:3525:77:2764:-195.66,0,-264.092	1/1:137:1,136:1:36:136:4880:-435.753,-37.6428,0	0/1:95:53,42:53:1892:42:1512:-107.777,0,-141.96	1/1:136:0,136:0:0:136:4837:-435.342,-40.9401,0	0/1:226:130,96:130:4628:96:3414:-239.436,0,-348.647	0/1:255:115,139:115:4064:139:4969:-370.562,0,-289.144	0/1:37:14,22:14:500:22:792:-60.4088,0,-34.1395	0/1:310:155,155:155:5523:155:5542:-405.579,0,-403.32	0/1:168:87,81:87:3094:81:2895:-210.213,0,-228.07	0/1:183:105,78:105:3737:78:2793:-196.502,0,-281.397	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:24:1,23:1:36:23:828:-71.2458,-3.62645,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:10:5,4:5:180:4:144:-10.2445,0,-13.483	1/1:27:0,27:0:0:27:959:-86.6254,-8.12781,0	0/1:174:94,80:94:3298:80:2864:-205.617,0,-244.658	1/1:171:1,170:1:32:170:6102:-546.079,-48.2768,0	0/1:55:25,30:25:900:30:1076:-80.5846,0,-64.7644	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/1:148:73,75:73:2576:75:2675:-196.443,0,-187.536	0/1:42:21,21:21:743:21:756:-55.724,0,-54.5501	0/1:196:92,104:92:3287:104:3717:-275.728,0,-237.046	0/1:61:34,27:34:1224:27:972:-69.4351,0,-92.1042	0/1:76:36,40:36:1258:40:1432:-106.299,0,-90.6425	1/1:130:1,129:1:36:129:4619:-412.269,-35.5356,0	1/1:143:0,143:0:0:143:5116:-460.583,-43.0473,0	1/1:178:2,176:2:72:176:6279:-558.355,-46.7466,0	0/1:117:54,63:54:1925:63:2264:-168.802,0,-138.303	0/1:102:50,52:50:1791:52:1853:-136.298,0,-130.761	1/1:159:0,159:0:0:159:5665:-509.959,-47.8638,0	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	1/1:122:0,122:0:0:122:4375:-393.922,-36.7257,0	1/1:75:0,75:0:0:75:2692:-242.521,-22.5773,0	0/1:11:1,10:1:36:10:356:-29.0699,0,-0.286945	0/1:142:68,74:68:2424:74:2660:-196.888,0,-175.647	0/1:61:32,29:32:1140:29:1040:-75.5515,0,-84.5464	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	1/1:15:0,15:0:0:15:532:-48.2131,-4.51545,0	0/1:55:30,25:30:1064:25:900:-64.7506,0,-79.515	0/1:124:61,63:61:2175:63:2249:-165.346,0,-158.688	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5473	1/1:200:0,200:0:0:200:7160:-644.428,-60.206,0	0/1:160:85,75:85:3018:75:2682:-193.46,0,-223.686	0/1:58:33,25:33:1167:25:896:-63.5006,0,-87.8753	1/1:102:0,102:0:0:102:3653:-328.972,-30.7051,0	0/1:157:71,86:71:2487:86:3066:-228.907,0,-176.814	0/1:182:121,61:121:4283:61:2177:-141.401,0,-330.862	1/1:60:0,60:0:0:60:2156:-194.307,-18.0618,0	1/1:61:0,61:0:0:61:2165:-195.115,-18.3628,0	0/1:35:24,11:24:864:11:396:-25.4467,0,-67.5465	0/1:18:10,8:10:356:8:273:-19.4816,0,-26.9627	0/1:131:73,58:73:2608:58:2064:-146.592,0,-195.533	0/1:93:49,44:49:1727:44:1561:-112.783,0,-127.716	0/1:108:58,50:58:2070:50:1780:-127.971,0,-154.058	1/1:155:0,155:0:0:155:5551:-499.582,-46.6597,0	1/1:176:0,176:0:0:176:6315:-568.414,-52.9813,0	0/1:90:36,54:36:1268:54:1936:-147.424,0,-87.3008	1/1:23:0,23:0:0:23:824:-74.4657,-6.92369,0	1/1:101:0,101:0:0:101:3628:-326.724,-30.404,0	0/1:75:42,33:42:1504:33:1184:-84.2911,0,-113.077	0/1:241:110,131:110:3908:131:4687:-349.436,0,-279.359	0/1:52:29,23:29:1036:23:802:-56.843,0,-77.8645	1/1:76:0,76:0:0:76:2699:-243.152,-22.8783,0	0/1:40:15,25:15:536:25:896:-68.9192,0,-36.5336	1/1:115:0,115:0:0:115:4119:-370.887,-34.6185,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	0/1:86:42,44:42:1512:44:1584:-116.963,0,-110.486	1/1:99:0,99:0:0:99:3526:-317.551,-29.802,0	1/1:58:0,58:0:0:58:2075:-187.019,-17.4597,0	0/1:135:65,70:65:2297:70:2512:-185.692,0,-166.351	0/1:67:51,16:51:1828:16:576:-32.006,0,-144.632	1/1:168:0,168:0:0:168:5965:-536.955,-50.573,0	1/1:118:0,118:0:0:118:4224:-380.332,-35.5215,0
chr09	2504696	.	C	T	76629.3	PASS	AB=0.556616;ABP=218.893;AC=57;AF=0.303191;AN=188;AO=4325;CIGAR=1X;DP=12141;DPB=12141;DPRA=1.17251;EPP=9307.97;EPPR=16651;GTI=2;LEN=1;MEANALT=1.04762;MQM=59.9635;MQMR=59.993;NS=94;NUMALT=1;ODDS=2.71277;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=155125;QR=279074;RO=7810;RPL=4315;RPP=9307.97;RPPR=16651;RPR=10;RUN=1;SAF=0;SAP=9394.63;SAR=4325;SRF=0;SRP=16962.2;SRR=7810;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:36:22,14:22:780:14:504:-34.861,0,-59.686	0/0:216:216,0:216:7715:0:0:0,-65.0225,-694.382	0/0:139:139,0:139:4965:0:0:0,-41.8432,-446.998	0/0:302:302,0:302:10793:0:0:0,-90.9111,-971.252	0/1:102:40,62:40:1436:62:2220:-169.359,0,-98.8326	0/1:35:15,20:15:540:20:720:-54.5927,0,-38.4005	0/0:135:135,0:135:4835:0:0:0,-40.639,-435.303	0/1:217:92,125:92:3296:125:4492:-339.123,0,-231.535	0/1:50:32,18:32:1140:18:648:-43.5719,0,-87.8577	0/1:163:51,112:51:1820:112:4027:-313.549,0,-115.013	0/1:112:47,65:47:1688:65:2318:-175.165,0,-118.492	0/0:86:86,0:86:3072:0:0:0,-25.8886,-276.709	0/1:70:40,30:40:1436:30:1080:-76.4412,0,-108.466	0/1:116:41,75:41:1468:75:2684:-206.886,0,-97.4966	0/1:82:38,44:38:1350:44:1584:-118.167,0,-97.1144	0/1:54:26,28:26:923:28:1004:-74.4202,0,-67.1311	0/1:83:53,30:53:1895:30:1080:-72.5278,0,-145.842	0/0:67:66,1:66:2356:1:36:0,-16.5707,-208.701	0/0:43:43,0:43:1532:0:0:0,-12.9443,-138.173	0/1:349:183,166:183:6555:166:5953:-430.815,0,-484.971	0/1:159:70,89:70:2504:89:3204:-240.718,0,-177.749	0/1:205:66,139:66:2351:139:4977:-386.364,0,-150.138	0/0:72:72,0:72:2563:0:0:0,-21.6742,-230.92	0/1:137:71,66:71:2531:66:2372:-172.497,0,-186.8	0/0:96:96,0:96:3432:0:0:0,-28.8989,-309.094	0/1:420:176,243:176:6269:243:8698:-656.356,0,-437.854	0/1:370:127,242:127:4540:242:8672:-669.016,0,-297.328	0/1:42:23,19:23:820:19:673:-48.1952,0,-61.4793	0/1:374:182,192:182:6483:192:6888:-507.401,0,-470.974	0/1:226:112,114:112:3999:114:4073:-298.723,0,-292.067	0/1:174:78,96:78:2775:96:3429:-256.443,0,-197.609	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:43:42,0:42:1495:0:0:0,-12.6433,-134.484	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/1:15:6,9:6:212:9:320:-24.6269,0,-14.9093	0/0:24:24,0:24:851:0:0:0,-7.22472,-76.9095	0/1:214:114,100:114:4066:100:3584:-258.346,0,-301.706	0/0:252:252,0:252:9020:0:0:0,-75.8596,-811.779	0/1:85:39,46:39:1388:46:1656:-123.741,0,-99.6314	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:180:77,103:77:2764:103:3700:-279.016,0,-194.816	0/1:55:28,27:28:1004:27:972:-71.2413,0,-74.1192	0/1:199:74,125:74:2652:125:4473:-342.833,0,-179.021	0/1:73:31,41:31:1112:41:1472:-110.742,0,-78.3574	0/1:64:32,32:32:1148:32:1152:-84.7242,0,-84.3639	0/0:105:105,0:105:3735:0:0:0,-31.6081,-336.352	0/0:121:120,1:120:4292:1:36:0,-32.8264,-382.859	0/0:213:211,2:211:7546:2:68:0,-57.6617,-672.722	0/1:163:64,99:64:2280:99:3560:-271.539,0,-156.394	0/1:259:110,149:110:3948:149:5352:-403.843,0,-277.544	0/0:215:215,0:215:7683:0:0:0,-64.7214,-691.506	0/1:24:13,11:13:468:11:396:-28.758,0,-35.2349	0/0:196:196,0:196:7018:0:0:0,-59.0019,-631.681	0/0:44:41,3:41:1467:3:108:0,-3.17015,-122.25	0/1:37:23,14:23:828:14:504:-34.56,0,-63.706	0/1:172:80,92:80:2842:92:3308:-246.16,0,-204.241	0/1:55:24,31:24:860:31:1116:-84.195,0,-61.1652	0/1:24:6,18:6:216:18:648:-51.4272,0,-12.5658	0/0:9:9,0:9:311:0:0:0,-2.70927,-28.3237	0/1:118:50,68:50:1792:68:2439:-184.244,0,-126.041	0/1:131:58,73:58:2080:73:2624:-196.972,0,-148.035	0/1:20:8,12:8:288:12:432:-33.2006,0,-20.2468	0/0:251:250,0:250:8921:0:0:0,-75.2575,-802.515	0/1:252:120,132:120:4308:132:4709:-348.107,0,-312.036	0/1:115:53,62:53:1879:62:2228:-166.165,0,-134.77	0/0:140:140,0:140:5003:0:0:0,-42.1442,-450.418	0/1:256:120,136:120:4292:136:4888:-363.006,0,-309.394	0/1:219:45,174:45:1612:174:6235:-495.318,0,-79.4445	0/0:64:64,0:64:2291:0:0:0,-19.2659,-206.451	0/0:92:92,0:92:3262:0:0:0,-27.6948,-293.802	0/1:102:51,51:51:1824:51:1834:-134.636,0,-133.736	0/1:45:17,28:17:608:28:1008:-77.49,0,-41.5057	0/0:134:133,1:133:4759:1:36:0,-36.7397,-424.869	0/1:79:35,44:35:1256:44:1584:-119.07,0,-89.5639	0/1:175:73,102:73:2603:102:3656:-276.505,0,-181.838	0/0:219:218,1:218:7823:1:36:0,-62.3273,-700.497	0/0:150:149,0:149:5336:0:0:0,-44.8535,-480.013	0/1:163:72,91:72:2576:91:3276:-245.991,0,-183.022	0/0:17:17,0:17:593:0:0:0,-5.11751,-53.6947	0/0:211:211,0:211:7547:0:0:0,-63.5173,-679.266	0/1:146:63,83:63:2256:83:2964:-223.043,0,-159.353	0/1:250:113,137:113:4040:137:4920:-367.692,0,-288.531	0/1:111:62,49:62:2224:49:1764:-125.607,0,-167.005	0/0:76:76,0:76:2708:0:0:0,-22.8783,-243.965	0/1:110:57,53:57:2023:53:1896:-137.805,0,-149.229	0/0:149:149,0:149:5291:0:0:0,-44.8535,-476.33	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/1:64:31,33:31:1112:33:1184:-87.6024,0,-81.1254	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.401	0/0:77:77,0:77:2725:0:0:0,-23.1793,-245.493	0/1:130:78,52:78:2796:52:1872:-129.625,0,-212.746	0/1:66:21,45:21:756:45:1599:-124.283,0,-48.4992	0/0:178:178,0:178:6376:0:0:0,-53.5833,-573.9	0/0:107:107,0:107:3819:0:0:0,-32.2102,-343.908
chr09	3121373	.	TGC	CGC,CGT	74458.7	PASS	AB=0.532924,0.109962;ABP=35.182,2430.39;AC=115,18;AF=0.611702,0.0957447;AN=188;AO=3611,255;CIGAR=1X2M,1X1M1X;DP=5274;DPB=5274;DPRA=14.1667,1.05245;EPP=7844.2,556.736;EPPR=3019.19;GTI=6;LEN=1,3;MEANALT=1.77419,2.17544;MQM=59.9169,59.8902;MQMR=59.9899;NS=94;NUMALT=2;ODDS=1.07051;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=128949,8872;QR=49083;RO=1389;RPL=3611,255;RPP=7844.2,556.736;RPPR=3019.19;RPR=0,0;RUN=1,1;SAF=0,0;SAP=7844.2,556.736;SAR=3611,255;SRF=0;SRP=3019.19;SRR=1389;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:19:5,11,3:5:177:11,3:388,106:-30.0878,0,-11.1069,-22.96,-5.7857,-36.4752	1/1:38:0,36,0:0:0:36,0:1284,0:-115.556,-10.8371,0,-115.556,-10.8371,-115.556	1/1:92:0,84,8:0:0:84,8:2969,279:-267.09,-25.2865,0,-244.4,-2.24723,-241.992	1/1:86:0,83,3:0:0:83,3:2960,100:-266.021,-24.9855,0,-257.929,-16.5587,-257.026	0/1:29:12,17,0:12:414:17,0:608,0:-46.3175,0,-28.8584,-49.9299,-33.9759,-83.5558	0/1:21:7,14,0:7:244:14,0:500,0:-38.9776,0,-15.9772,-41.0849,-20.1916,-60.9253	1/1:31:0,31,0:0:0:31,0:1110,0:-100.211,-9.33193,0,-100.211,-9.33193,-100.211	0/1:71:45,26,0:45:1552:26,0:936,0:-63.1863,0,-118.59,-76.7327,-126.416,-202.795	0/1:64:25,38,1:25:889:38,1:1345,36:-102.023,0,-61.0045,-106.611,-69.506,-178.758	0/1:44:16,28,0:16:572:28,0:989,0:-76.0767,0,-38.5683,-80.8932,-46.9972,-127.535	0/1:42:15,23,4:15:513:23,4:820,140:-62.3326,0,-34.706,-55.4584,-30.2374,-95.8845	1/1:61:0,59,2:0:0:59,2:2108,72:-189.63,-17.7608,0,-183.755,-11.5261,-183.153	0/1:52:17,35,0:17:607:35,0:1260,0:-98.0519,0,-39.3083,-103.169,-49.8443,-152.656	0/1:51:23,27,1:23:814:27,1:972,28:-72.4636,0,-58.2465,-77.1714,-64.1587,-143.171	0/1:52:22,30,0:22:790:30,0:1063,0:-80.3273,0,-55.7718,-86.9499,-64.8027,-151.396	0/1:44:22,22,0:22:764:22,0:792,0:-58.3604,0,-55.8327,-64.983,-62.4554,-127.085	0/1:22:10,12,0:10:360:12,0:428,0:-32.2361,0,-26.1216,-35.2464,-29.734,-64.6221	1/1:27:0,24,2:0:0:24,2:845,70:-76.0153,-7.22472,0,-70.3201,-1.53536,-69.7181	0/1:13:8,4,1:8:288:4,1:144,36:-9.34143,0,-22.2952,-8.81225,-20.5619,-32.0106	0/1:120:63,57,0:63:2213:57,0:2012,0:-145.217,0,-163.31,-164.182,-180.469,-344.298	0/1:77:40,36,1:40:1418:36,1:1288,36:-92.9855,0,-104.679,-102.089,-112.578,-217.308	0/1:63:33,29,1:33:1170:29,1:1044,36:-75.2511,0,-86.5832,-82.2477,-92.3755,-177.262	1/1:95:0,95,0:0:0:95,0:3392,0:-305.495,-28.5979,0,-305.495,-28.5979,-305.495	0/1:5:3,2,0:3:108:2,0:72,0:-5.33157,0,-8.57002,-6.23466,-9.17208,-15.0469	1/1:45:0,44,1:0:0:44,1:1571,36:-141.316,-13.2453,0,-138.378,-9.94808,-138.077	0/1:150:65,83,2:65:2284:83,2:2979,72:-223.43,0,-160.909,-237.122,-180.019,-422.419	1/1:144:0,133,9:0:0:133,9:4763,295:-428.37,-40.037,0,-404.54,-16.1908,-401.831	0/1:20:10,8,2:10:356:8,2:288,72:-20.489,0,-26.6038,-17.6245,-23.1365,-46.0355	0/1:159:56,102,1:56:1995:102,1:3652,34:-280.981,0,-131.921,-295.081,-159.868,-457.39	0/1:41:21,20,0:21:739:20,0:712,0:-52.0644,0,-54.4895,-58.3861,-60.5101,-118.542	0/1:68:36,31,1:36:1281:31,1:1095,36:-78.2743,0,-95.0636,-86.1738,-101.458,-190.274	1/2:9:0,2,7:0:0:2,7:72,240:-25.706,-19.8273,-19.2253,-6.23466,0,-4.12745	1/2:34:0,25,9:0:0:25,9:896,324:-99.8718,-26.7966,-19.2708,-73.4346,0,-70.7253	1/2:46:0,15,31:0:0:15,31:540,1064:-130.798,-86.7311,-82.2156,-44.4211,0,-35.0892	1/2:47:5,30,12:5:180:30,12:1061,415:-103.929,-19.0213,-24.6816,-71.7134,0,-82.789	1/2:29:0,18,11:0:0:18,11:648,384:-84.452,-31.5716,-26.1531,-53.2333,0,-49.922	0/1:133:64,69,0:64:2291:69,0:2467,0:-182.246,0,-166.415,-201.512,-187.186,-388.341	0/1:83:40,43,0:40:1397:43,0:1540,0:-113.908,0,-101.04,-125.949,-113.984,-239.58	0/1:28:17,9,1:17:597:9,1:324,36:-21.3192,0,-45.8719,-23.4993,-45.6433,-71.7818	1/2:8:0,3,5:0:0:3,5:108,170:-22.9486,-14.1288,-13.2257,-9.17208,0,-7.66693	0/1:51:17,30,4:17:605:30,4:1060,144:-81.2038,0,-40.2735,-74.5709,-37.554,-122.675	0/1:24:11,11,2:11:394:11,2:396,72:-29.0003,0,-28.8193,-26.4368,-26.2555,-57.966	0/1:72:34,36,1:34:1200:36,1:1288,31:-94.8154,0,-86.8971,-102.563,-95.2469,-199.977	0/1:29:15,14,0:15:538:14,0:504,0:-36.9682,0,-40.0259,-41.4837,-44.2403,-85.3648	0/1:32:19,13,0:19:682:13,0:468,0:-32.8267,0,-52.0769,-38.5463,-55.9903,-94.1771	1/1:73:1,71,1:1:36:71,1:2552,36:-226.332,-18.4357,0,-223.695,-18.4357,-226.332	1/1:78:0,75,1:0:0:75,1:2675,26:-240.667,-22.5773,0,-238.63,-20.5717,-238.329	1/1:132:0,128,4:0:0:128,4:4576,144:-411.647,-38.5318,0,-399.897,-26.4223,-398.693	0/1:51:25,26,0:25:884:26,0:919,0:-67.6736,0,-64.5257,-75.1994,-72.3525,-147.198	0/1:53:30,23,0:30:1047:23,0:816,0:-57.8071,0,-78.5842,-66.838,-85.5079,-151.994	1/1:52:0,52,0:0:0:52,0:1864,0:-168.039,-15.6536,0,-168.039,-15.6536,-168.039	1/2:16:1,10,5:1:36:10,5:360,172:-39.8702,-11.015,-10.9448,-26.2073,0,-27.6398	1/1:116:0,114,1:0:0:114,1:4061,36:-365.367,-34.3174,0,-362.43,-31.3001,-362.129	1/2:22:1,19,2:1:36:19,2:676,72:-57.7254,-2.93742,-0.155265,-52.1512,0,-54.4867	1/2:21:0,9,12:0:0:9,12:304,410:-58.2515,-33.6137,-30.9044,-24.9772,0,-21.3648	0/1:72:20,46,6:20:710:46,6:1643,214:-127.933,0,-44.0016,-116.508,-40.4035,-172.5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chr09	3775948	.	G	T	177907	PASS	AB=0.486441;ABP=16.4358;AC=126;AF=0.670213;AN=188;AO=8872;CIGAR=1X;DP=13199;DPB=13199;DPRA=0;EPP=19268.3;EPPR=9385.94;GTI=0;LEN=1;MEANALT=1.05319;MQM=59.9395;MQMR=59.9956;NS=94;NUMALT=1;ODDS=8.57614;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=315807;QR=154732;RO=4321;RPL=8872;RPP=19268.3;RPPR=9385.94;RPR=0;RUN=1;SAF=0;SAP=19268.3;SAR=8872;SRF=0;SRP=9385.94;SRR=4321;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:59:33,26:33:1188:26:921:-65.4444,0,-89.4678	1/1:229:1,228:1:36:228:8112:-726.496,-65.3376,0	1/1:385:0,385:0:0:385:13752:-1237.46,-115.897,0	1/1:302:0,302:0:0:302:10723:-964.976,-90.9111,0	0/1:84:54,30:54:1919:30:1052:-69.7006,0,-147.7	0/1:63:30,33:30:1072:33:1180:-87.5416,0,-77.8276	1/1:277:0,277:0:0:277:9880:-888.987,-83.3853,0	0/1:196:83,113:83:2964:113:4015:-302.534,0,-207.989	0/1:152:72,80:72:2580:80:2835:-209.628,0,-186.693	0/1:150:85,65:85:3048:65:2313:-163.257,0,-229.395	0/1:90:29,61:29:1035:61:2162:-167.751,0,-66.3704	1/1:98:0,98:0:0:98:3509:-316.018,-29.5009,0	0/1:101:43,58:43:1544:58:2069:-156.075,0,-108.849	0/1:93:37,56:37:1320:56:1989:-151.286,0,-91.1062	0/1:69:29,40:29:1044:40:1424:-107.686,0,-73.5037	0/1:79:47,32:47:1684:32:1148:-79.8405,0,-128.066	0/1:121:57,63:57:2040:63:2215:-163.123,0,-147.389	1/1:66:0,66:0:0:66:2353:-212.027,-19.868,0	0/1:56:27,29:27:972:29:1040:-77.0567,0,-70.9402	0/1:340:180,160:180:6402:160:5707:-411.393,0,-473.917	0/1:239:111,128:111:3964:128:4553:-337.981,0,-285.006	0/1:157:111,45:111:3954:45:1605:-97.4177,0,-308.729	1/1:46:0,46:0:0:46:1622:-146.265,-13.8474,0	0/1:239:105,134:105:3768:134:4788:-359.127,0,-267.372	1/1:126:0,126:0:0:126:4494:-404.582,-37.9298,0	0/1:354:169,185:169:6060:185:6538:-481.938,0,-438.937	1/1:220:1,219:1:36:219:7745:-693.483,-62.6283,0	0/1:42:29,13:29:1044:13:468:-29.8164,0,-81.6315	0/1:356:187,169:187:6688:169:5958:-429.158,0,-494.831	0/1:176:71,105:71:2543:105:3700:-280.195,0,-176.139	0/1:139:64,75:64:2304:75:2649:-196.809,0,-165.777	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:33:13,20:13:468:20:701:-53.4777,0,-32.5257	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:20:15,5:15:540:5:165:-9.153,0,-42.9159	1/1:29:0,29:0:0:29:1010:-91.207,-8.72987,0	0/1:223:99,124:99:3528:124:4456:-334.079,0,-250.598	0/1:281:147,134:147:5284:134:4763:-344.236,0,-391.103	0/1:120:61,59:61:2183:59:2106:-153.686,0,-160.612	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	0/1:285:154,131:154:5520:131:4689:-336.375,0,-411.131	0/1:61:33,28:33:1173:28:1000:-71.951,0,-87.5127	0/1:200:97,103:97:3475:103:3667:-270.024,0,-252.755	0/1:86:51,35:51:1836:35:1242:-86.1952,0,-139.632	0/1:66:31,35:31:1116:35:1226:-90.7717,0,-80.8837	1/1:68:0,68:0:0:68:2425:-218.502,-20.47,0	1/1:162:0,162:0:0:162:5783:-520.563,-48.7669,0	1/1:214:1,213:1:36:213:7542:-675.219,-60.8221,0	0/1:152:93,59:93:3328:59:2090:-142.61,0,-253.981	0/1:222:116,106:116:4134:106:3750:-270.871,0,-305.413	1/1:242:1,241:1:32:241:8594:-770.213,-69.6499,0	0/1:30:14,16:14:500:16:542:-40.0668,0,-36.3053	1/1:366:0,366:0:0:366:12987:-1168.52,-110.177,0	1/1:96:0,96:0:0:96:3413:-307.377,-28.8989,0	0/1:29:14,15:14:500:15:540:-40.2067,0,-36.6063	0/1:202:103,99:103:3688:99:3539:-257.909,0,-271.315	0/1:25:10,15:10:360:15:540:-41.4108,0,-25.2186	0/1:14:4,10:4:140:10:360:-28.5299,0,-8.73016	0/1:34:18,16:18:648:16:572:-41.5784,0,-48.4169	0/1:121:46,75:46:1648:75:2668:-203.941,0,-112.184	0/1:123:64,59:64:2292:59:2116:-153.552,0,-169.515	0/1:14:7,7:7:252:7:248:-18.4498,0,-18.8145	1/1:157:0,157:0:0:157:5585:-502.771,-47.2617,0	0/1:259:134,125:134:4804:125:4480:-325.402,0,-354.548	0/1:97:45,52:45:1620:52:1857:-138.208,0,-116.89	1/1:148:0,148:0:0:148:5263:-473.748,-44.5524,0	0/1:180:93,87:93:3325:87:3120:-226.755,0,-245.276	0/1:216:139,77:139:4992:77:2739:-181.728,0,-384.403	1/1:61:0,61:0:0:61:2181:-196.554,-18.3628,0	1/1:175:2,171:2:72:171:6137:-545.395,-45.6013,0	0/1:102:42,60:42:1503:60:2141:-162.251,0,-104.859	0/1:39:24,15:24:860:15:540:-37.1964,0,-65.9817	1/1:139:0,139:0:0:139:4955:-445.989,-41.8432,0	0/1:94:43,51:43:1532:51:1793:-133.351,0,-109.876	0/1:233:97,136:97:3488:136:4869:-368.219,0,-243.99	1/1:253:0,253:0:0:253:9009:-810.787,-76.1606,0	0/1:177:100,77:100:3596:77:2718:-191.58,0,-270.563	0/1:174:109,64:109:3908:64:2270:-152.077,0,-299.475	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	1/1:193:0,193:0:0:193:6867:-618.097,-58.0988,0	0/1:200:106,94:106:3799:94:3380:-244.208,0,-281.901	0/1:378:230,147:230:8240:147:5220:-356.083,0,-627.754	0/1:92:46,46:46:1656:46:1626:-118.928,0,-121.634	1/1:83:0,83:0:0:83:2988:-269.151,-24.9855,0	0/1:73:28,45:28:1008:45:1608:-123.034,0,-69.0612	1/1:142:0,142:0:0:142:5096:-458.782,-42.7463,0	0/1:44:27,17:27:968:17:612:-42.1681,0,-74.192	0/1:72:44,28:44:1575:28:993:-68.0083,0,-120.367	1/1:93:0,93:0:0:93:3310:-298.116,-27.9958,0	1/1:97:0,97:0:0:97:3469:-311.993,-29.1999,0	0/1:143:56,87:56:2012:87:3065:-233.03,0,-138.306	0/1:129:99,30:99:3524:30:1068:-57.5537,0,-278.536	1/1:156:0,156:0:0:156:5555:-499.505,-46.9607,0	1/1:119:1,118:1:36:118:4240:-378.151,-32.2243,0
chr09	3789223	.	GCCC	GCCT,TCCT	228580	PASS	AB=0.48329,0.511711;ABP=19.9913,11.3513;AC=127,61;AF=0.675532,0.324468;AN=188;AO=7286,3595;CIGAR=3M1X,1X2M1X;DP=10943;DPB=10943;DPRA=0,1.05219;EPP=15824.4,7809.45;EPPR=31.2394;GTI=0;LEN=1,4;MEANALT=2.18085,2.40845;MQM=59.6635,52.3419;MQMR=60;NS=94;NUMALT=2;ODDS=5.80005;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=261048,127502;QR=460;RO=13;RPL=0,0;RPP=15824.4,7809.45;RPPR=31.2394;RPR=7286,3595;RUN=1,1;SAF=0,0;SAP=15824.4,7809.45;SAR=7286,3595;SRF=0;SRP=31.2394;SRR=13;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:45:0,24,21:0:0:24,21:864,749:-131.629,-61.1283,-53.9036,-70.8578,0,-64.5362	1/1:106:0,106,0:0:0:106,0:3792,0:-341.391,-31.9092,0,-341.391,-31.9092,-341.391	1/1:206:0,205,0:0:0:205,0:7355,0:-661.511,-61.7112,0,-661.511,-61.7112,-661.511	1/1:247:0,244,0:0:0:244,0:8753,0:-786.512,-73.4513,0,-786.512,-73.4513,-786.512	1/2:67:0,32,35:0:0:32,35:1148,1237:-194.448,-100.816,-91.1826,-93.9877,0,-83.4516	1/2:70:0,36,34:0:0:36,34:1292,1212:-204.254,-98.8645,-88.0274,-105.747,0,-95.5117	1/1:109:0,109,0:0:0:109,0:3916,0:-352.613,-32.8123,0,-352.613,-32.8123,-352.613	1/2:214:0,104,108:0:0:104,108:3732,3844:-615.789,-311.422,-280.115,-304.412,0,-271.901	1/2:126:0,55,70:0:0:55,70:1976,2468:-361.462,-200.264,-183.708,-161.214,0,-140.142	1/2:114:0,50,64:0:0:50,64:1781,2269:-329.757,-184.604,-169.553,-145.507,0,-126.241	1/2:63:0,29,33:0:0:29,33:1044,1164:-179.862,-94.6713,-85.9414,-85.3106,0,-75.3767	1/1:103:0,102,1:0:0:102,1:3620,35:-325.646,-30.7051,0,-322.804,-27.5147,-322.503	1/2:72:0,35,37:0:0:35,37:1260,1299:-208.409,-105.62,-95.0838,-103.144,0,-92.0061	1/2:102:0,58,44:0:0:58,44:2088,1564:-297.544,-127.171,-109.711,-170.73,0,-157.485	1/2:53:0,24,29:0:0:24,29:864,1041:-155.321,-84.8222,-77.5975,-70.8578,0,-62.128	1/2:77:0,42,35:0:0:42,35:1500,1247:-223.944,-101.65,-89.0067,-122.65,0,-112.114	1/2:43:0,23,20:0:0:23,20:828,703:-124.783,-57.2194,-50.2957,-67.9181,0,-61.8975	1/1:36:0,36,0:0:0:36,0:1288,0:-116.224,-10.8371,0,-116.224,-10.8371,-116.224	1/2:17:0,11,6:0:0:11,6:396,216:-49.305,-16.9899,-13.6786,-32.6632,0,-30.857	1/2:198:0,107,90:0:0:107,90:3824,3184:-570.353,-258.585,-226.375,-311.764,0,-284.671	1/2:187:0,103,84:0:0:103,84:3685,2962:-541.29,-240.948,-209.942,-300.696,0,-275.409	1/2:87:0,21,65:0:0:21,65:756,2307:-248.995,-187.324,-181.002,-61.6703,0,-42.1033	1/1:213:1,211,0:1:36:211,0:7568,0:-677.463,-60.5399,0,-677.764,-63.5173,-680.702	1/2:56:0,31,25:0:0:31,25:1112,899:-164.149,-73.4654,-64.1335,-91.042,0,-83.5163	1/1:88:0,86,1:0:0:86,1:3088,29:-277.817,-25.8886,0,-275.51,-23.6156,-275.209	1/2:345:1,158,184:1:36:158,184:5635,6478:-981.297,-522.417,-477.792,-456.243,0,-403.791	1/1:212:1,211,0:1:30:211,0:7580,0:-679.063,-60.8188,0,-679.364,-63.5173,-681.763	1/2:33:0,22,11:0:0:22,11:784,391:-96.0772,-32.1722,-25.5495,-64.2603,0,-60.949	1/2:369:0,174,195:0:0:174,195:6252,6943:-1072.6,-563.44,-511.061,-509.518,0,-450.817	1/2:200:0,112,86:0:0:112,86:4008,3044:-573.41,-246.577,-212.861,-326.828,0,-300.939	1/2:440:0,218,220:0:0:218,220:7786,7784:-1265.17,-630.429,-564.804,-634.736,0,-568.509	1/1:23:0,22,0:0:0:22,0:792,0:-71.2448,-6.62266,0,-71.2448,-6.62266,-71.2448	1/2:19:0,13,6:0:0:13,6:464,216:-55.7819,-17.9563,-14.0429,-38.1841,0,-36.3779	1/1:18:0,18,0:0:0:18,0:644,0:-58.2906,-5.41854,0,-58.2906,-5.41854,-58.2906	1/2:16:0,8,8:0:0:8,8:288,280:-46.5331,-23.028,-20.6198,-23.8592,0,-21.4509	1/1:18:0,18,0:0:0:18,0:646,0:-58.4498,-5.41854,0,-58.4498,-5.41854,-58.4498	1/2:155:0,82,73:0:0:82,73:2944,2604:-451.864,-211.783,-187.099,-240.438,0,-218.463	1/2:166:0,83,82:0:0:83,82:2975,2925:-480.305,-237.704,-212.719,-242.619,0,-217.934	1/2:41:0,24,17:0:0:24,17:864,609:-120.026,-49.5251,-42.3004,-70.8578,0,-65.7403	1/1:14:0,13,1:0:0:13,1:464,35:-41.7429,-3.91339,0,-38.8993,-0.719852,-38.5983	1/2:189:1,88,100:1:36:88,100:3152,3548:-541.876,-285.187,-261.633,-254.049,0,-226.884	1/2:25:0,16,9:0:0:16,9:576,322:-73.5662,-26.5751,-21.7586,-47.3493,0,-44.64	1/2:150:0,73,75:0:0:73,75:2627,2684:-432.831,-218.497,-196.521,-214.334,0,-191.757	1/2:52:0,33,19:0:0:33,19:1188,677:-152.213,-55.2747,-45.3407,-97.2946,0,-91.575	1/2:59:1,25,33:1:36:25,33:900,1186:-166.268,-93.189,-88.6007,-70.4418,0,-63.4453	1/1:91:0,90,1:0:0:90,1:3232,36:-290.705,-27.0927,0,-287.776,-23.8045,-287.475	1/1:167:0,165,2:0:0:165,2:5906,72:-531.12,-49.67,0,-525.261,-43.4525,-524.659	1/1:192:0,189,1:0:0:189,1:6769,36:-608.844,-56.8947,0,-605.913,-53.9634,-605.612	1/2:127:0,56,71:0:0:56,71:2016,2523:-369.814,-205.333,-188.475,-164.838,0,-143.465	1/2:188:0,98,90:0:0:98,90:3497,3208:-546.298,-261.273,-231.772,-285.382,0,-258.289	1/1:188:0,187,0:0:0:187,0:6650,0:-597.654,-56.2926,0,-597.654,-56.2926,-597.654	1/2:20:0,10,10:0:0:10,10:360,336:-56.8912,-27.511,-24.5007,-29.7278,0,-26.7175	1/1:162:0,161,1:0:0:161,1:5767,35:-518.774,-48.4658,0,-515.933,-45.2754,-515.632	1/1:127:0,127,0:0:0:127,0:4558,0:-410.366,-38.2308,0,-410.366,-38.2308,-410.366	1/2:25:0,13,12:0:0:13,12:468,424:-72.6252,-34.641,-30.7276,-38.3386,0,-34.7262	1/2:208:0,84,123:0:0:84,123:2997,4345:-597.309,-353.019,-327.732,-244.366,0,-207.339	1/2:19:0,5,14:0:0:5,14:180,478:-53.592,-38.8995,-37.3944,-15.0469,0,-10.8325	1/2:22:0,8,14:0:0:8,14:288,497:-63.9367,-40.4426,-38.0343,-23.8509,0,-19.6365	1/2:31:0,12,19:0:0:12,19:432,661:-88.9924,-53.7461,-50.1338,-35.6006,0,-29.881	1/2:115:0,52,62:0:0:52,62:1864,2196:-330.393,-178.376,-162.723,-152.014,0,-133.35	1/2:107:1,52,54:1:35:52,54:1864,1929:-305.595,-153.877,-141.071,-149.179,0,-135.771	1/2:7:0,5,2:0:0:5,2:180,72:-20.9092,-6.22164,-4.71649,-15.0469,0,-14.4449	1/1:275:1,266,1:1:36:266,1:9519,36:-852.958,-77.1363,0,-850.33,-77.1445,-852.966	1/2:264:0,120,142:0:0:120,142:4285,5029:-757.731,-408.441,-372.318,-349.308,0,-306.562	1/2:109:0,46,63:0:0:46,63:1648,2234:-315.989,-181.584,-167.737,-134.761,0,-115.796	1/1:81:0,79,0:0:0:79,0:2832,0:-254.806,-23.7814,0,-254.806,-23.7814,-254.806	1/2:181:0,79,101:0:0:79,101:2836,3568:-521.129,-289.8,-266.019,-231.485,0,-201.081	1/2:178:0,68,109:0:0:68,109:2444,3862:-512.801,-313.438,-292.968,-199.377,0,-166.565	1/1:58:0,58,0:0:0:58,0:2088,0:-188.126,-17.4597,0,-188.126,-17.4597,-188.126	1/1:88:0,87,0:0:0:87,0:3112,0:-279.902,-26.1896,0,-279.902,-26.1896,-279.902	1/2:61:0,33,28:0:0:33,28:1188,1005:-179.043,-82.1099,-72.1759,-97.2923,0,-88.8634	1/2:45:0,14,31:0:0:14,31:504,1112:-131.993,-90.8745,-86.6601,-41.4775,0,-32.1455	1/1:137:0,136,1:0:0:136,1:4884,36:-439.205,-40.9401,0,-436.275,-37.6519,-435.974	1/2:142:0,69,72:0:0:69,72:2476,2554:-409.41,-207.505,-186.734,-201.902,0,-180.228	1/2:295:0,166,128:0:0:166,128:5948,4552:-855.258,-370.204,-320.233,-485.051,0,-446.52	1/1:214:0,212,0:0:0:212,0:7572,0:-681.08,-63.8184,0,-681.08,-63.8184,-681.08	1/2:139:5,75,59:5:179:75,59:2662,2091:-370.337,-155.071,-147.091,-202.169,0,-199.006	1/2:156:0,80,75:0:0:80,75:2864,2652:-448.965,-215.428,-191.345,-233.553,0,-210.976	1/1:15:0,15,0:0:0:15,0:531,0:-48.1215,-4.51545,0,-48.1215,-4.51545,-48.1215	1/1:146:0,146,0:0:0:146,0:5244,0:-472.081,-43.9504,0,-472.081,-43.9504,-472.081	1/2:160:0,71,88:0:0:71,88:2544,3115:-460.437,-252.974,-231.601,-207.479,0,-180.988	1/2:142:0,55,87:0:0:55,87:1959,3093:-411.389,-251.727,-235.17,-160.017,0,-133.828	1/2:52:0,28,24:0:0:28,24:1004,848:-150.76,-68.912,-60.4832,-82.2021,0,-74.9773	1/1:94:0,94,0:0:0:94,0:3375,0:-303.92,-28.2968,0,-303.92,-28.2968,-303.92	1/2:44:0,18,26:0:0:18,26:644,930:-128.537,-76.0222,-70.6037,-52.8721,0,-45.0453	1/1:136:0,134,2:0:0:134,2:4812,72:-432.844,-40.338,0,-426.981,-34.1164,-426.379	1/2:26:0,18,8:0:0:18,8:644,280:-75.5948,-23.0745,-17.6559,-52.8721,0,-50.4638	1/2:79:0,39,39:0:0:39,39:1400,1387:-226.929,-112.735,-100.995,-114.192,0,-102.452	1/1:94:0,93,0:0:0:93,0:3335,0:-299.953,-27.9958,0,-299.953,-27.9958,-299.953	1/1:56:0,56,0:0:0:56,0:2012,0:-181.343,-16.8577,0,-181.343,-16.8577,-181.343	1/2:139:0,72,67:0:0:72,67:2584,2374:-403.346,-192.697,-171.023,-211.004,0,-190.835	1/2:71:0,24,47:0:0:24,47:856,1669:-205.649,-135.883,-128.658,-70.1215,0,-55.9731	1/1:127:1,126,0:1:36:126,0:4524,0:-403.709,-34.6325,0,-404.01,-37.9298,-406.948	1/1:100:0,100,0:0:0:100,0:3591,0:-322.955,-30.103,0,-322.955,-30.103,-322.955
chr09	5488210	.	C	G	341037	PASS	AB=0.48166;ABP=36.8605;AC=128;AF=0.680851;AN=188;AO=13115;CIGAR=1X;DP=19152;DPB=19152;DPRA=0;EPP=28481.9;EPPR=13051.4;GTI=0;LEN=1;MEANALT=1.24468;MQM=59.7092;MQMR=59.9837;NS=94;NUMALT=1;ODDS=16.9249;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=463134;QR=211400;RO=6009;RPL=6662;RPP=10.2426;RPPR=37.0691;RPR=6453;RUN=1;SAF=6662;SAP=10.2426;SAR=6453;SRF=3158;SRP=37.0691;SRR=2851;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:84:41,43:41:1446:43:1510:-110.896,0,-105.144	1/1:242:0,242:0:0:242:8602:-774.114,-72.8493,0	1/1:261:0,261:0:0:261:9256:-832.954,-78.5688,0	1/1:362:1,361:1:36:361:12777:-1146.11,-105.375,0	0/1:153:82,71:82:2857:71:2527:-181.613,0,-211.311	0/1:147:77,69:77:2708:69:2427:-174.355,0,-199.652	1/1:304:0,304:0:0:304:10704:-963.1,-91.5131,0	0/1:358:191,166:191:6715:166:5839:-417.387,0,-496.603	0/1:256:146,110:146:5131:110:3861:-270.475,0,-384.874	0/1:260:128,132:128:4472:132:4673:-342.457,0,-324.386	0/1:159:82,77:82:2882:77:2710:-196.249,0,-211.752	1/1:195:2,193:2:72:193:6825:-607.406,-51.8641,0	0/1:140:66,74:66:2327:74:2603:-192.351,0,-167.546	0/1:185:99,86:99:3413:86:3027:-216.785,0,-251.695	0/1:148:78,70:78:2754:70:2466:-177.315,0,-203.55	0/1:133:64,69:64:2233:69:2428:-178.736,0,-161.196	0/1:145:78,66:78:2678:66:2322:-165.522,0,-197.557	1/1:97:0,97:0:0:97:3438:-309.618,-29.1999,0	0/1:79:42,36:42:1457:36:1258:-89.6727,0,-107.58	0/1:347:181,165:181:6359:165:5812:-418.656,0,-467.889	0/1:380:198,182:198:6987:182:6422:-463.617,0,-514.505	0/1:200:132,68:132:4659:68:2409:-156.86,0,-359.27	1/1:238:1,237:1:36:237:8397:-752.108,-68.0469,0	0/1:143:73,69:73:2600:69:2443:-177.015,0,-191.143	1/1:207:0,207:0:0:207:7318:-658.632,-62.3132,0	0/1:558:270,285:270:9503:285:10049:-736.896,0,-687.807	1/1:612:2,608:2:72:608:21423:-1920.5,-177.151,0	0/1:79:38,41:38:1324:41:1451:-107.098,0,-95.6754	0/1:475:273,201:273:9635:201:7106:-496.516,0,-724.116	0/1:245:113,132:113:4025:132:4677:-347.313,0,-288.682	0/1:293:166,127:166:5854:127:4461:-313.437,0,-438.773	1/1:24:0,23:0:0:23:821:-73.8462,-6.92369,0	0/1:41:15,26:15:536:26:919:-70.6793,0,-36.2326	1/1:23:0,23:0:0:23:815:-73.6708,-6.92369,0	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:33:8,25:8:288:25:869:-67.4825,0,-16.3334	0/1:423:227,196:227:7988:196:6873:-491.308,0,-591.621	0/1:235:127,108:127:4480:108:3829:-274.057,0,-332.632	0/1:144:70,74:70:2461:74:2622:-192.877,0,-178.396	0/1:14:7,7:7:244:7:252:-18.8145,0,-18.085	1/1:242:0,242:0:0:242:8530:-766.806,-72.8493,0	0/1:67:31,36:31:1095:36:1249:-92.4098,0,-78.6901	0/1:238:109,128:109:3823:128:4548:-337.779,0,-272.565	0/1:180:86,94:86:2994:94:3310:-243.884,0,-215.506	0/1:123:71,52:71:2489:52:1844:-129.21,0,-187.234	1/1:360:2,357:2:72:357:12666:-1132.9,-101.593,0	1/1:229:3,225:3:104:225:7987:-708.994,-59.2546,0	1/1:369:1,368:1:36:368:12982:-1164.22,-107.482,0	0/1:294:139,155:139:4863:155:5470:-403.91,0,-349.322	0/1:319:155,164:155:5454:164:5829:-428.683,0,-394.967	1/1:317:0,316:0:0:316:11137:-1001.72,-95.1255,0	0/1:26:15,11:15:536:11:387:-27.3392,0,-40.748	1/1:231:0,231:0:0:231:8140:-732.493,-69.5379,0	1/1:135:0,135:0:0:135:4814:-433.29,-40.6391,0	0/1:21:15,6:15:519:6:179:-10.0825,0,-40.7151	0/1:286:135,151:135:4707:151:5343:-394.874,0,-337.698	0/1:142:69,73:69:2445:73:2587:-190.298,0,-177.558	0/1:22:15,7:15:517:7:252:-16.4063,0,-40.2319	0/1:33:16,17:16:568:17:586:-43.1279,0,-41.5179	0/1:233:114,117:114:4027:117:4116:-300.599,0,-292.723	0/1:212:107,105:107:3741:105:3693:-268.739,0,-273.076	1/1:15:0,15:0:0:15:523:-47.3985,-4.51545,0	0/1:310:170,140:170:6044:140:4973:-354.375,0,-450.747	0/1:303:150,153:150:5314:153:5371:-392.31,0,-387.185	0/1:175:84,91:84:2958:91:3229:-238.133,0,-213.772	1/1:154:1,153:1:36:153:5372:-480.008,-42.7603,0	0/1:353:168,185:168:5972:185:6567:-484.727,0,-431.281	0/1:270:171,99:171:6080:99:3485:-232.571,0,-466.027	1/1:98:0,98:0:0:98:3485:-313.844,-29.5009,0	1/1:172:0,172:0:0:172:6097:-548.16,-51.7772,0	0/1:147:73,74:73:2545:74:2599:-189.86,0,-185.048	0/1:53:28,25:28:968:25:892:-64.6451,0,-71.4741	1/1:214:0,214:0:0:214:7552:-679.71,-64.4204,0	0/1:193:98,95:98:3465:95:3341:-242.717,0,-253.965	1/1:454:1,453:1:36:453:16015:-1437.3,-133.069,0	1/1:288:0,287:0:0:287:10122:-910.551,-86.3956,0	0/1:236:108,128:108:3768:128:4545:-338.068,0,-268.28	0/1:227:102,124:102:3566:124:4394:-327.223,0,-252.748	1/1:21:0,21:0:0:21:741:-66.9939,-6.32163,0	1/1:233:0,233:0:0:233:8284:-745.484,-70.14,0	0/1:255:133,122:133:4662:122:4330:-313.105,0,-342.794	1/1:432:0,431:0:0:431:15153:-1363.22,-129.744,0	0/1:184:109,75:109:3868:75:2642:-182.498,0,-292.84	1/1:99:0,99:0:0:99:3486:-313.325,-29.802,0	0/1:166:82,84:82:2870:84:2963:-216.93,0,-208.566	1/1:315:3,312:3:108:312:11035:-982.875,-84.7493,0	0/1:77:39,38:39:1351:38:1347:-98.3502,0,-98.7053	0/1:144:74,70:74:2587:70:2447:-177.119,0,-189.73	1/1:158:0,156:0:0:156:5487:-493.513,-46.9607,0	1/1:107:0,106:0:0:106:3739:-336.313,-31.9092,0	0/1:236:112,124:112:3962:124:4367:-322.012,0,-285.729	0/1:191:132,59:132:4658:59:2071:-129.125,0,-361.892	1/1:165:0,164:0:0:164:5782:-519.919,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chr09	5986165	.	G	T	321791	PASS	AB=0.294355;ABP=21800.2;AC=75;AF=0.398936;AN=188;AO=17650;CIGAR=1X;DP=64837;DPB=64837;DPRA=9.10158;EPP=56.9273;EPPR=100742;GTI=15;LEN=1;MEANALT=1.28571;MQM=59.9522;MQMR=59.844;NS=94;NUMALT=1;ODDS=9.51358;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=624483;QR=1676312;RO=47157;RPL=17594;RPP=37844.6;RPPR=413.306;RPR=56;RUN=1;SAF=9106;SAP=41.8685;SAR=8544;SRF=25229;SRP=504.774;SRR=21928;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:307:205,102:205:7292:102:3567:-228.818,0,-563.79	0/1:486:350,136:350:12487:136:4812:-286.938,0,-977.241	0/1:981:745,235:745:26488:235:8306:-452.189,0,-2086.61	0/1:516:395,121:395:14089:121:4269:-229.061,0,-1112.32	0/1:384:253,131:253:9013:131:4627:-300.992,0,-695.184	0/1:379:222,157:222:7931:157:5494:-380.506,0,-599.622	0/1:320:213,107:213:7618:107:3775:-243.624,0,-589.298	0/1:461:347,114:347:12302:114:4006:-221.958,0,-968.143	0/1:497:428,69:428:15185:69:2456:-71.6833,0,-1216.5	0/1:818:627,190:627:22260:190:6688:-355.704,0,-1756.13	0/1:1163:790,373:790:28129:373:13190:-836.798,0,-2180.68	0/1:1380:841,539:841:29766:539:19071:-1300.55,0,-2262.21	0/1:2222:1456,766:1456:51669:766:27237:-1781.66,0,-3978.76	0/1:2382:1581,801:1581:56128:801:28318:-1830.77,0,-4331.84	0/1:1727:1218,506:1218:43381:506:17930:-1093.89,0,-3383.32	0/1:2587:1837,750:1837:65284:750:26544:-1609.47,0,-5093.5	0/1:1726:1184,539:1184:42082:539:19133:-1202.51,0,-3266.79	0/1:2297:1634,662:1634:58089:662:23463:-1419.52,0,-4533.06	0/1:869:568,301:568:20208:301:10649:-696.735,0,-1555.52	0/0:323:306,17:306:10844:17:593:0,-43.538,-922.143	0/0:540:504,36:504:17923:36:1231:0,-51.4717,-1501.46	0/1:224:178,46:178:6315:46:1623:-78.9275,0,-501	0/1:349:260,88:260:9280:88:3099:-173.973,0,-730.044	0/1:295:238,57:238:8478:57:2002:-91.6489,0,-674.191	0/1:165:133,32:133:4734:32:1116:-51.0774,0,-376.533	0/0:433:416,17:416:14820:17:594:0,-76.5604,-1279.12	0/0:436:433,3:433:15400:3:100:0,-121.948,-1376.19	0/1:323:197,126:197:7007:126:4478:-305.96,0,-533.38	0/0:266:265,1:265:9330:1:36:0,-76.4757,-836.076	0/1:252:225,27:225:7977:27:956:-10.4962,0,-642.078	0/1:302:209,93:209:7439:93:3275:-204.061,0,-578.402	0/1:46:39,7:39:1396:7:252:-9.18158,0,-112.092	0/1:61:51,10:51:1810:10:351:-13.5638,0,-144.817	0/1:25:20,5:20:705:5:180:-9.02631,0,-56.247	0/0:31:29,2:29:1023:2:72:0,-2.49521,-85.3538	0/1:89:70,19:70:2503:19:662:-33.1109,0,-198.685	0/1:1214:795,417:795:28276:417:14777:-964.281,0,-2178.8	0/1:110:93,17:93:3310:17:596:-20.8545,0,-264.988	0/1:1116:718,397:718:25513:397:14058:-928.995,0,-1959.12	0/1:21:15,6:15:532:6:212:-13.1032,0,-41.7611	0/1:391:318,73:318:11333:73:2600:-116.546,0,-902.136	0/1:240:156,84:156:5519:84:2968:-195.106,0,-424.581	0/1:592:430,162:430:15328:162:5720:-336.715,0,-1200.96	0/1:781:515,266:515:18324:266:9456:-615.872,0,-1413.63	0/1:1008:670,337:670:23724:337:11960:-772.851,0,-1830.94	0/1:409:342,67:342:12151:67:2381:-91.2389,0,-970.286	0/0:260:235,25:235:8402:25:863:0,-0.283653,-678.054	0/1:466:343,123:343:12181:123:4326:-249.241,0,-953.231	0/1:285:228,57:228:8093:57:1996:-94.1177,0,-642.591	0/1:302:244,58:244:8670:58:2047:-92.9529,0,-689.358	0/0:120:119,1:119:4248:1:32:0,-32.9243,-379.291	0/1:24:19,5:19:669:5:171:-8.50073,0,-53.3046	0/1:200:176,24:176:6297:24:837:-15.4396,0,-506.55	0/1:569:499,69:499:17759:69:2422:-46.892,0,-1426.31	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.697	0/0:296:278,18:278:9877:18:636:0,-31.5368,-830.985	0/1:192:164,28:164:5780:28:996:-32.1571,0,-462.487	0/1:52:43,9:43:1520:9:315:-13.0345,0,-121.437	0/0:58:57,1:57:2023:1:36:0,-13.8615,-178.744	0/1:541:484,57:484:17173:57:2009:-18.2246,0,-1382.05	0/1:1097:755,342:755:26893:342:12121:-760.518,0,-2089.31	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:339:335,4:335:11963:4:144:0,-88.7545,-1063.22	0/1:474:400,74:400:14219:74:2599:-91.4694,0,-1136.69	0/0:287:275,12:275:9775:12:432:0,-47.1744,-840.27	0/0:179:179,0:179:6372:0:0:0,-53.8844,-573.571	0/1:474:385,88:385:13756:88:3103:-136.72,0,-1095.04	0/1:578:481,96:481:17085:96:3410:-133.058,0,-1362.94	0/1:1704:1100,603:1100:39214:603:21407:-1412.87,0,-3013.3	0/1:424:367,56:367:13027:56:2000:-52.6862,0,-1044.42	0/1:1232:857,373:857:30361:373:13188:-816.117,0,-2360.92	0/0:203:201,2:201:7129:2:68:0,-54.6514,-635.127	0/1:134:109,25:109:3870:25:879:-39.0888,0,-308.142	0/1:856:733,122:733:26024:122:4297:-129.152,0,-2083.55	0/1:577:422,153:422:15013:153:5349:-308.114,0,-1176.9	0/0:933:912,21:912:32530:21:744:0,-213.577,-2859.39	0/1:384:304,80:304:10815:80:2851:-141.233,0,-857.58	0/0:671:649,22:649:23097:22:765:0,-132.823,-2007.8	0/0:67:66,1:66:2355:1:36:0,-16.5707,-208.602	0/1:853:739,113:739:26245:113:3981:-101.591,0,-2104.45	0/1:626:559,67:559:19859:67:2367:-24.8441,0,-1598.27	0/1:437:352,84:352:12571:84:2936:-132.87,0,-999.551	0/1:1568:1067,501:1067:37963:501:17777:-1127.54,0,-2942.93	0/1:1316:963,353:963:34244:353:12502:-728.869,0,-2683.26	0/1:2466:1592,874:1592:56542:874:30818:-2030.32,0,-4343.81	0/1:1969:1288,681:1288:45636:681:24107:-1576.25,0,-3512.68	0/1:602:419,183:419:14900:183:6448:-399.19,0,-1159.45	0/1:1552:1083,468:1083:38442:468:16550:-1021.9,0,-2990.9	0/1:897:586,310:586:20757:310:10967:-716.858,0,-1597.23	0/1:1351:919,431:919:32688:431:15269:-967.174,0,-2534.09	0/1:1451:964,487:964:34185:487:17271:-1117.15,0,-2638.56	0/1:815:528,286:528:18758:286:10182:-670.919,0,-1442.36	0/1:437:304,133:304:10854:133:4682:-289.995,0,-845.184	0/1:2920:1801,1119:1801:64107:1119:39664:-2689.17,0,-4888.22
chr09	7064529	.	AGATC	ATATC,AT	501802	PASS	AB=0.618857,0.377309;ABP=1411.17,1503.49;AC=128,60;AF=0.680851,0.319149;AN=188;AO=14401,4341;CIGAR=1M1X3M,1M3D1X;DP=18836;DPB=16242;DPRA=0,0.965754;EPP=31274.4,9429.37;EPPR=5.18177;GTI=0;LEN=1,2;MEANALT=2.48936,2.70312;MQM=59.6463,52.7726;MQMR=56.75;NS=94;NUMALT=2;ODDS=2.68497;PAIRED=0,0;PAIREDR=0;PAO=15.3333,16.3333;PQA=422,458;PQR=0;PRO=3.33333;QA=512380,154657;QR=135;RO=4;RPL=7633,1232;RPP=115.832,1765.36;RPPR=3.0103;RPR=6768,3109;RUN=1,1;SAF=7633,1232;SAP=115.832,1765.36;SAR=6768,3109;SRF=1;SRP=5.18177;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:96:0,69,27:0:0:69,27:2428,960:-275.363,-77.7132,-56.9421,-198.002,0,-189.874	1/1:383:0,382,0:0:0:382,0:13548,0:-1218.56,-114.993,0,-1218.56,-114.993,-1218.56	1/1:324:0,322,0:0:0:322,0:11490,0:-1033.19,-96.9317,0,-1033.19,-96.9317,-1033.19	1/1:374:0,364,4:0:0:364,4:12953,144:-1164.97,-109.575,0,-1153.25,-97.8236,-1152.05	1/2:165:0,131,33:0:0:131,33:4700,1184:-479.347,-96.1562,-56.7212,-383.236,0,-373.302	1/2:129:0,101,28:0:0:101,28:3602,1000:-373.742,-80.4393,-50.0353,-293.655,0,-285.226	1/1:280:1,276,0:1:31:276,0:9831,0:-881.638,-80.5815,0,-881.939,-83.0843,-884.427	1/2:343:0,255,88:0:0:255,88:9018,3110:-983.557,-249.183,-172.42,-734.664,0,-708.174	1/2:167:0,137,29:0:0:137,29:4900,1026:-482.585,-83.0733,-41.8322,-399.649,0,-390.919	1/2:253:0,130,122:0:0:130,122:4630,4351:-730.835,-353.599,-314.465,-377.408,0,-340.682	1/2:131:0,52,78:0:0:52,78:1856,2783:-377.493,-226.199,-210.546,-151.292,0,-127.812	1/1:130:0,130,0:0:0:130,0:4639,0:-417.559,-39.1339,0,-417.559,-39.1339,-417.559	1/2:152:1,101,49:1:32:101,49:3604,1756:-433.006,-139.575,-111.737,-291.184,0,-279	1/2:145:0,99,46:0:0:99,46:3468,1620:-412.462,-130.738,-100.936,-282.073,0,-268.225	1/2:99:0,52,47:0:0:52,47:1840,1684:-286.595,-136.736,-121.082,-150.214,0,-136.066	1/2:95:0,63,31:0:0:63,31:2238,1108:-272.017,-89.7988,-70.8339,-182.214,0,-172.882	1/2:166:1,128,37:1:36:128,37:4556,1317:-473.557,-102.822,-67.2281,-368.091,0,-359.89	1/1:102:0,101,0:0:0:101,0:3616,0:-325.082,-30.404,0,-325.082,-30.404,-325.082	1/2:104:0,78,26:0:0:78,26:2800,932:-303.214,-75.1495,-51.6692,-228.419,0,-220.592	1/2:439:0,246,191:0:0:246,191:8750,6840:-1269.4,-556.492,-482.439,-712.922,0,-655.426	1/2:325:0,234,90:0:0:234,90:8352,3212:-940.847,-260.297,-189.856,-680.476,0,-653.384	1/2:181:0,76,102:0:0:76,102:2695,3627:-514.762,-295.199,-272.321,-219.557,0,-188.852	1/1:129:0,127,0:0:0:127,0:4512,0:-405.699,-38.2308,0,-405.699,-38.2308,-405.699	1/2:348:0,269,78:0:0:269,78:9593,2753:-1004.37,-222.648,-141.671,-781.71,0,-758.229	1/1:177:0,176,0:0:0:176,0:6265,0:-563.428,-52.9813,0,-563.428,-52.9813,-563.428	1/2:634:0,340,291:0:0:340,291:12106,10399:-1831.22,-844.588,-742.238,-986.677,0,-899.077	1/1:511:0,508,0:0:0:508,0:18063,0:-1624.51,-152.923,0,-1624.51,-152.923,-1624.51	1/2:69:0,46,22:0:0:46,22:1656,788:-199.163,-64.0449,-50.1976,-135.201,0,-128.578	1/2:668:0,398,268:0:0:398,268:14177,9515:-1929.55,-774.227,-654.417,-1155.35,0,-1074.67	1/2:230:0,174,56:0:0:174,56:6180,1996:-664.948,-161.67,-109.291,-503.632,0,-486.774	1/2:210:0,123,86:0:0:123,86:4400,3088:-610.315,-251.582,-214.555,-358.829,0,-332.941	1/1:19:0,19,0:0:0:19,0:672,0:-60.8068,-5.71957,0,-60.8068,-5.71957,-60.8068	1/2:45:0,33,12:0:0:33,12:1171,428:-130.489,-35.0849,-25.1509,-95.7589,0,-92.1466	1/1:21:0,21,0:0:0:21,0:752,0:-68.0063,-6.32163,0,-68.0063,-6.32163,-68.0063	1/2:25:0,15,10:0:0:15,10:525,356:-71.8654,-29.1583,-24.6429,-43.0591,0,-40.0488	1/2:39:0,25,14:0:0:25,14:896,500:-113.338,-40.2678,-32.7421,-73.423,0,-69.2086	1/2:345:0,178,165:0:0:178,165:6329,5907:-996.089,-480.34,-426.757,-515.75,0,-466.08	1/2:331:0,252,79:0:0:252,79:8944,2819:-954.295,-225.729,-149.869,-728.558,0,-704.777	1/2:174:0,108,66:0:0:108,66:3864,2351:-504.863,-189.916,-157.405,-315.301,0,-295.433	1/2:15:0,6,9:0:0:6,9:210,324:-43.5357,-26.4559,-24.6497,-17.432,0,-14.7227	1/1:333:0,331,0:0:0:331,0:11790,0:-1060.18,-99.6409,0,-1060.18,-99.6409,-1060.18	1/2:62:0,38,23:0:0:38,23:1340,812:-174.912,-65.8339,-54.3948,-109.07,0,-102.147	1/2:323:0,252,70:0:0:252,70:8939,2490:-929.26,-201.306,-125.446,-727.947,0,-706.875	1/2:109:1,59,49:1:36:59,49:2112,1744:-310.913,-138.988,-124.165,-169.285,0,-157.472	1/2:93:0,52,41:0:0:52,41:1829,1456:-267.383,-118.5,-102.847,-149.235,0,-136.893	1/1:242:0,242,0:0:0:242,0:8588,0:-772.907,-72.8493,0,-772.907,-72.8493,-772.907	1/1:281:0,276,1:0:0:276,1:9857,36:-886.647,-83.0843,0,-883.732,-80.1553,-883.431	1/1:314:0,306,5:0:0:306,5:10919,180:-982.2,-92.1152,0,-967.537,-77.3771,-966.032	1/2:158:0,74,84:0:0:74,84:2640,3008:-460.158,-244.957,-222.68,-215.499,0,-190.212	1/2:283:0,165,118:0:0:165,118:5829,4208:-816.374,-341.686,-292.016,-474.983,0,-439.461	1/1:389:0,385,0:0:0:385,0:13619,0:-1225.13,-115.897,0,-1225.13,-115.897,-1225.13	1/2:34:0,18,16:0:0:18,16:644,564:-98.5582,-46.0434,-40.6248,-52.8688,0,-48.0523	1/1:293:0,293,0:0:0:293,0:10450,0:-940.247,-88.2018,0,-940.247,-88.2018,-940.247	1/1:117:0,117,0:0:0:117,0:4158,0:-374.348,-35.2205,0,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chr09	7064539	.	C	T	345519	PASS	AB=0.579804;ABP=567.249;AC=128;AF=0.680851;AN=188;AO=13113;CIGAR=1X;DP=17417;DPB=17417;DPRA=0;EPP=28477.5;EPPR=9327.32;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.58;MQMR=52.8126;NS=94;NUMALT=1;ODDS=11.4653;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=464716;QR=151247;RO=4302;RPL=6237;RPP=70.627;RPPR=1794.63;RPR=6876;RUN=1;SAF=6237;SAP=70.627;SAR=6876;SRF=1207;SRP=1802.25;SRR=3095;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:77:26,51:26:936:51:1824:-141.257,0,-60.4872	1/1:372:0,371:0:0:371:13220:-1188.31,-111.682,0	1/1:313:0,313:0:0:313:11152:-1003.21,-94.2224,0	1/1:373:4,369:4:144:369:13037:-1158.46,-99.004,0	0/1:113:34,79:34:1211:79:2778:-216.158,0,-74.8147	0/1:98:28,70:28:978:70:2495:-195.036,0,-57.4355	1/1:281:0,281:0:0:281:9883:-888.69,-84.5894,0	0/1:273:86,187:86:3055:187:6658:-516.598,0,-188.944	0/1:128:29,99:29:1036:99:3504:-276.991,0,-54.3954	0/1:245:119,126:119:4167:126:4465:-328.16,0,-300.685	0/1:132:77,55:77:2694:55:1968:-137.625,0,-202.371	1/1:124:0,124:0:0:124:4407:-396.702,-37.3277,0	0/1:112:50,62:50:1784:62:2201:-164.552,0,-126.045	0/1:127:45,82:45:1600:82:2850:-217.98,0,-104.688	0/1:94:46,48:46:1623:48:1703:-125.25,0,-117.13	0/1:69:32,37:32:1115:37:1309:-97.2821,0,-79.1475	0/1:130:39,91:39:1328:91:3251:-253.456,0,-79.2909	1/1:101:0,101:0:0:101:3604:-324.299,-30.404,0	0/1:89:26,63:26:919:63:2256:-176.47,0,-55.0739	0/1:430:188,242:188:6593:242:8570:-641.638,0,-462.83	0/1:247:89,158:89:3135:158:5615:-430.78,0,-206.626	0/1:176:102,74:102:3516:74:2610:-182.167,0,-263.411	1/1:125:0,125:0:0:125:4418:-397.229,-37.6288,0	0/1:265:78,187:78:2767:187:6628:-516.576,0,-167.885	1/1:175:0,175:0:0:175:6226:-560.326,-52.6803,0	0/1:624:284,340:284:9967:340:12053:-896.591,0,-706.532	1/1:504:0,504:0:0:504:17868:-1607.51,-151.719,0	0/1:59:24,35:24:860:35:1252:-95.2161,0,-59.416	0/1:639:263,376:263:9124:376:13314:-1005.57,0,-627.737	0/1:192:55,137:55:1954:137:4885:-380.775,0,-116.963	0/1:209:89,120:89:3095:120:4218:-316.869,0,-215.439	1/1:19:0,19:0:0:19:669:-60.5339,-5.71957,0	0/1:42:13,29:13:464:29:1035:-80.806,0,-29.2813	1/1:21:0,21:0:0:21:743:-67.1933,-6.32163,0	0/1:25:10,15:10:352:15:540:-41.3993,0,-24.2933	0/1:37:15,22:15:513:22:781:-59.4717,0,-34.5273	0/1:334:165,169:165:5755:169:6011:-440.539,0,-416.189	0/1:264:81,183:81:2895:183:6499:-505.383,0,-177.065	0/1:139:65,74:65:2302:74:2623:-194.408,0,-163.588	0/1:15:9,6:9:316:6:216:-15.2611,0,-23.9393	1/1:318:0,318:0:0:318:11198:-1007.32,-95.7275,0	0/1:50:22,28:22:770:28:971:-72.6211,0,-54.2971	0/1:238:71,167:71:2471:167:5946:-463.561,0,-149.478	0/1:104:47,57:47:1621:57:2023:-151.034,0,-114.671	0/1:90:40,50:40:1411:50:1784:-133.75,0,-99.8555	1/1:236:0,236:0:0:236:8343:-750.874,-71.0431,0	1/1:275:1,274:1:36:274:9765:-874.569,-79.2098,0	1/1:308:6,302:6:212:302:10682:-941.52,-73.3124,0	0/1:152:78,74:78:2756:74:2643:-192.342,0,-202.095	0/1:276:117,159:117:4158:159:5660:-426.433,0,-289.247	1/1:379:0,379:0:0:379:13357:-1201.86,-114.09,0	0/1:32:15,17:15:532:17:604:-45.0495,0,-38.3479	1/1:285:0,285:0:0:285:10192:-916.518,-85.7936,0	1/1:116:0,116:0:0:116:4104:-369.49,-34.9195,0	0/1:45:29,16:29:1023:16:568:-37.9055,0,-78.228	0/1:162:46,116:46:1634:116:4134:-323.473,0,-97.7091	0/1:88:22,66:22:784:66:2324:-182.927,0,-44.3467	0/1:18:11,7:11:392:7:252:-17.6104,0,-30.0294	0/1:50:26,24:26:928:24:860:-62.6653,0,-68.4986	0/1:157:35,122:35:1239:122:4332:-342.751,0,-62.8451	0/1:242:119,123:119:4165:123:4334:-316.228,0,-300.894	1/1:26:0,26:0:0:26:919:-83.0042,-7.82678,0	0/1:266:120,146:120:4232:146:5166:-384.731,0,-300.097	0/1:389:203,186:203:7129:186:6593:-475.598,0,-523.636	0/1:171:44,127:44:1572:127:4484:-351.645,0,-88.7729	1/1:187:0,187:0:0:187:6613:-595.213,-56.2926,0	0/1:301:122,179:122:4276:179:6372:-482.741,0,-293.134	0/1:265:181,83:181:6338:83:2927:-183.847,0,-489.124	1/1:85:0,85:0:0:85:3015:-271.552,-25.5876,0	1/1:192:0,192:0:0:192:6851:-616.647,-57.7978,0	0/1:147:78,69:78:2695:69:2457:-177.127,0,-198.116	0/1:52:21,31:21:752:31:1112:-84.7378,0,-51.7594	1/1:151:0,151:0:0:151:5345:-480.857,-45.4555,0	0/1:73:31,42:31:1099:42:1485:-111.808,0,-76.2993	1/1:262:0,262:0:0:262:9158:-824.055,-78.8699,0	1/1:400:0,400:0:0:400:14163:-1274.31,-120.412,0	0/1:198:81,117:81:2865:117:4179:-316.598,0,-195.874	0/1:288:113,175:113:4008:175:6236:-474.081,0,-270.898	1/1:27:0,27:0:0:27:966:-87.0928,-8.12781,0	1/1:227:3,224:3:108:224:7891:-700.08,-58.2586,0	0/1:185:75,110:75:2663:110:3907:-295.89,0,-182.388	1/1:398:1,397:1:32:397:14054:-1261.21,-116.611,0	0/1:153:83,70:83:2927:70:2467:-176.217,0,-216.757	1/1:92:0,92:0:0:92:3211:-289.211,-27.6948,0	0/1:135:68,67:68:2379:67:2377:-173.505,0,-173.209	1/1:229:2,227:2:72:227:8031:-715.854,-62.1077,0	0/1:55:19,36:19:680:36:1272:-97.7362,0,-44.3394	0/1:112:39,73:39:1341:73:2608:-201.243,0,-86.3277	1/1:125:0,125:0:0:125:4463:-401.835,-37.6288,0	1/1:96:0,96:0:0:96:3405:-306.574,-28.8989,0	0/1:186:76,110:76:2707:110:3906:-295.637,0,-186.119	0/1:136:86,50:86:3042:50:1741:-116.029,0,-232.261	1/1:221:0,221:0:0:221:7784:-699.721,-66.5276,0	1/1:174:0,174:0:0:174: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chr09	7064549	.	T	C	139710	PASS	AB=0.501769;ABP=3.17932;AC=128;AF=0.680851;AN=188;AO=6750;CIGAR=1X;DP=9861;DPB=9861;DPRA=0;EPP=13990.8;EPPR=6575;GTI=0;LEN=1;MEANALT=1.05319;MQM=59.3993;MQMR=50.159;NS=94;NUMALT=1;ODDS=7.33791;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240770;QR=111085;RO=3106;RPL=6673;RPP=13999.3;RPPR=6575;RPR=77;RUN=1;SAF=1;SAP=14651.8;SAR=6749;SRF=0;SRP=6747.6;SRR=3106;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:26,24:26:907:24:860:-62.6703,0,-66.0995	1/1:166:0,166:0:0:166:5949:-535.245,-49.971,0	1/1:179:0,178:0:0:178:6353:-571.108,-53.5833,0	1/1:161:4,156:4:144:156:5578:-488.386,-35.2443,0	0/1:58:34,24:34:1220:24:852:-59.3951,0,-92.1631	0/1:58:25,33:25:900:33:1169:-87.5762,0,-62.168	1/1:111:0,111:0:0:111:3958:-356.382,-33.4143,0	0/1:189:86,103:86:3068:103:3665:-273.041,0,-214.537	0/1:56:29,27:29:1036:27:966:-70.3582,0,-76.0661	0/1:149:90,58:90:3182:58:2084:-142.807,0,-240.834	0/1:110:66,44:66:2376:44:1555:-107.099,0,-180.237	1/1:77:0,77:0:0:77:2735:-246.278,-23.1793,0	0/1:78:47,31:47:1688:31:1099:-75.6089,0,-127.664	0/1:98:46,52:46:1652:52:1832:-135.073,0,-117.899	0/1:49:26,23:26:936:23:820:-59.3688,0,-68.8706	0/1:52:33,19:33:1180:19:684:-46.2092,0,-90.0724	0/1:103:39,64:39:1396:64:2272:-173.481,0,-93.1066	1/1:66:0,66:0:0:66:2364:-212.934,-19.868,0	0/1:69:25,44:25:896:44:1584:-122.039,0,-59.0227	0/1:207:102,105:102:3656:105:3738:-274.246,0,-265.563	0/1:171:88,83:88:3156:83:2942:-213.424,0,-231.358	0/1:60:33,27:33:1180:27:972:-69.7361,0,-87.9751	1/1:34:0,34:0:0:34:1177:-106.224,-10.235,0	0/1:179:77,102:77:2756:102:3616:-271.544,0,-192.75	1/1:92:0,92:0:0:92:3283:-295.592,-27.6948,0	0/1:338:155,183:155:5524:183:6528:-485.676,0,-393.117	1/1:252:0,252:0:0:252:9016:-811.317,-75.8596,0	0/1:41:25,16:25:900:16:572:-39.463,0,-68.4118	0/1:261:119,142:119:4248:142:5084:-378.862,0,-302.93	0/1:135:56,79:56:2008:79:2817:-212.514,0,-138.944	0/1:67:34,33:34:1224:33:1158:-84.3455,0,-89.8733	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:42:14,28:14:504:28:1000:-77.6584,0,-32.8714	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	0/1:21:9,12:9:320:12:420:-31.8078,0,-22.6305	0/1:27:14,13:14:500:13:464:-33.9581,0,-36.0673	0/1:202:99,103:99:3556:103:3679:-270.491,0,-258.055	0/1:180:81,99:81:2885:99:3518:-262.584,0,-201.598	0/1:117:65,52:65:2332:52:1859:-132.286,0,-172.823	0/1:15:9,6:9:320:6:216:-15.2611,0,-24.2945	1/1:122:1,121:1:36:121:4325:-385.409,-33.1274,0	0/1:38:23,15:23:824:15:532:-36.7463,0,-62.7357	0/1:139:69,70:69:2460:70:2482:-181.759,0,-178.375	0/1:47:18,29:18:644:29:1040:-79.766,0,-43.9254	0/1:53:24,29:24:864:29:1035:-77.5085,0,-61.6322	1/1:121:0,121:0:0:121:4327:-389.591,-36.4246,0	1/1:151:1,150:1:36:150:5363:-478.6,-41.8821,0	1/1:177:3,174:3:108:174:6231:-550.631,-43.2325,0	0/1:113:57,56:57:2027:56:1996:-145.886,0,-148.17	0/1:167:71,96:71:2535:96:3428:-258.458,0,-176.065	1/1:150:0,150:0:0:150:5364:-482.87,-45.1545,0	0/1:25:11,14:11:392:14:496:-37.4403,0,-27.8582	1/1:158:0,158:0:0:158:5648:-508.308,-47.5627,0	1/1:48:0,48:0:0:48:1716:-154.696,-14.4494,0	0/1:40:27,13:27:964:13:468:-30.4184,0,-74.3487	0/1:119:47,72:47:1684:72:2568:-195.546,0,-114.933	0/1:17:4,13:4:144:13:460:-36.6179,0,-8.16264	0/1:18:11,7:11:381:7:252:-17.6104,0,-29.1247	0/1:38:18,20:18:640:20:703:-52.1034,0,-46.3107	0/1:77:38,39:38:1356:39:1400:-103.079,0,-97.2816	0/1:168:81,87:81:2912:87:3094:-228.071,0,-210.296	1/1:19:0,19:0:0:19:684:-61.8399,-5.71957,0	0/1:122:62,60:62:2220:60:2144:-156.492,0,-162.633	0/1:195:102,93:102:3656:93:3305:-238.729,0,-269.489	0/1:88:39,49:39:1396:49:1746:-130.636,0,-98.0737	1/1:95:0,95:0:0:95:3395:-305.732,-28.5979,0	0/1:138:60,78:60:2148:78:2764:-207.365,0,-150.799	0/1:174:131,43:131:4680:43:1536:-86.1457,0,-366.97	1/1:65:0,65:0:0:65:2297:-206.944,-19.567,0	1/1:82:0,82:0:0:82:2944:-265.193,-24.6845,0	0/1:94:49,45:49:1735:45:1608:-116.709,0,-127.551	0/1:38:18,20:18:644:20:716:-53.3286,0,-46.3319	1/1:72:0,72:0:0:72:2556:-230.149,-21.6742,0	0/1:58:32,26:32:1148:26:917:-65.1672,0,-84.8744	1/1:98:0,98:0:0:98:3479:-313.24,-29.5009,0	1/1:196:0,196:0:0:196:7006:-630.425,-59.0019,0	0/1:159:82,77:82:2936:77:2756:-200.33,0,-213.894	0/1:232:114,118:114:4069:118:4210:-308.98,0,-292.743	1/1:27:0,27:0:0:27:961:-86.4244,-8.12781,0	1/1:131:0,131:0:0:131:4678:-421.096,-39.4349,0	0/1:135:75,60:75:2680:60:2136:-151.687,0,-198.767	1/1:198:0,197:0:0:197:7023:-631.578,-59.3029,0	0/1:93:43,50:43:1532:50:1796:-133.905,0,-109.35	1/1:56:0,56:0:0:56:1978:-178.293,-16.8577,0	0/1:84:45,39:45:1616:39:1390:-100.076,0,-119.851	1/1:142:1,141:1:36:141:5072:-452.989,-39.157,0	0/1:42:19,22:19:684:22:783:-57.1273,0,-48.542	0/1:89:40,49:40:1436:49:1730:-129.188,0,-101.644	1/1:73:0,73:0:0:73:2605:-234.697,-21.9752,0	1/1:77:0,77:0:0:77:2755:-248.105,-23.1793,0	0/1:153:75,78:75:2692:78:2784:-204.655,0,-194.709	0/1:83:59,24:59:2120:24:864:-53.0971,0,-165.26	1/1:119:0,119:0:0:119:4204:-378.426,-35.8226,0	1/1:98:0,98:0:0:98:3506:-315.681,-29.5009,0
chr09	7064558	.	TGAAG	CGAAG,CGAAT	208656	PASS	AB=0.492964,0.501186;ABP=5.7297,3.08755;AC=128,60;AF=0.680851,0.319149;AN=188;AO=6749,3179;CIGAR=1X4M,1X3M1X;DP=9977;DPB=9977;DPRA=0,1.0824;EPP=14554.2,6819.54;EPPR=5.18177;GTI=0;LEN=1,5;MEANALT=2.12766,2.48438;MQM=59.4273,50.1183;MQMR=60;NS=94;NUMALT=2;ODDS=11.5615;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=240784,112176;QR=36;RO=1;RPL=6737,3169;RPP=14554.2,6819.54;RPPR=5.18177;RPR=12,10;RUN=1,1;SAF=0,0;SAP=14658.3,6906.12;SAR=6749,3179;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:52:0,25,27:0:0:25,27:900,937:-149.132,-75.689,-68.1632,-73.7953,0,-65.6675	1/1:167:0,166,0:0:0:166,0:5938,0:-533.903,-49.971,0,-533.903,-49.971,-533.903	1/1:180:0,180,0:0:0:180,0:6416,0:-577.158,-54.1854,0,-577.158,-54.1854,-577.158	1/1:164:0,160,4:0:0:160,4:5735,144:-515.583,-48.1648,0,-503.865,-36.0888,-502.661	1/2:58:0,23,34:0:0:23,34:805,1215:-163.804,-98.5969,-91.6732,-65.1992,0,-54.9641	1/2:60:0,30,28:0:0:30,28:1076,979:-166.322,-78.5534,-69.5225,-87.8018,0,-79.373	1/1:111:0,109,0:0:0:109,0:3889,0:-349.825,-32.8123,0,-349.825,-32.8123,-349.825	1/2:193:0,102,90:0:0:102,90:3650,3158:-550.375,-253.1,-222.395,-297.27,0,-270.178	1/2:55:0,26,29:0:0:26,29:924,1031:-159.016,-83.7606,-75.9338,-75.6098,0,-66.8799	1/2:149:0,58,91:0:0:58,91:2051,3197:-426.825,-259.829,-242.369,-167.349,0,-139.955	1/2:110:0,42,67:0:0:42,67:1500,2381:-315.583,-193.321,-180.678,-122.258,0,-102.089	1/1:75:0,75,0:0:0:75,0:2671,0:-240.52,-22.5773,0,-240.52,-22.5773,-240.52	1/2:84:0,32,51:0:0:32,51:1152,1779:-237.585,-143.684,-134.051,-93.9169,0,-78.5644	1/2:99:0,51,48:0:0:51,48:1812,1699:-284.469,-137.363,-122.011,-147.458,0,-133.008	1/2:51:0,24,27:0:0:24,27:860,966:-148.33,-78.1927,-70.968,-70.4938,0,-62.366	1/2:54:0,20,34:0:0:20,34:704,1201:-154.42,-97.4044,-91.3838,-57.3656,0,-47.1305	1/2:103:0,62,40:0:0:62,40:2202,1403:-292.351,-112.997,-94.3331,-179.453,0,-167.412	1/1:66:0,66,0:0:0:66,0:2359,0:-212.484,-19.868,0,-212.484,-19.868,-212.484	1/2:69:0,43,26:0:0:43,26:1536,923:-199.587,-74.3843,-61.44,-125.555,0,-117.729	1/2:213:0,106,105:0:0:106,105:3756,3706:-606.48,-300.587,-268.677,-305.956,0,-274.348	1/2:175:0,82,91:0:0:82,91:2916,3196:-496.316,-258.777,-234.092,-237.572,0,-210.178	1/2:61:0,27,34:0:0:27,34:964,1205:-176.734,-98.1398,-90.012,-78.949,0,-68.714	1/1:33:0,33,0:0:0:33,0:1180,0:-106.5,-9.93399,0,-106.5,-9.93399,-106.5	1/2:183:0,103,80:0:0:103,80:3668,2798:-525.283,-226.538,-195.532,-299.097,0,-275.014	1/1:92:0,91,0:0:0:91,0:3249,0:-292.262,-27.3937,0,-292.262,-27.3937,-292.262	1/2:343:0,184,157:0:0:184,157:6592,5538:-986.954,-449.51,-394.121,-537.448,0,-490.187	1/1:254:0,253,0:0:0:253,0:9047,0:-813.727,-76.1606,0,-813.727,-76.1606,-813.727	1/2:41:0,16,25:0:0:16,25:576,863:-116.944,-69.9472,-65.1308,-47.3503,0,-39.8246	1/2:264:0,143,119:0:0:143,119:5124,4203:-759.187,-341.484,-298.437,-417.706,0,-381.884	1/2:137:0,80,56:0:0:80,56:2843,1990:-392.231,-160.93,-136.848,-231.402,0,-214.544	1/2:69:0,35,34:0:0:35,34:1248,1201:-199.484,-97.7613,-87.2253,-102.076,0,-91.8414	1/1:12:0,12,0:0:0:12,0:428,0:-38.8588,-3.61236,0,-38.8588,-3.61236,-38.8588	1/2:42:0,28,14:0:0:28,14:1000,491:-121.656,-40.1349,-31.7061,-81.8728,0,-77.6584	1/1:17:0,17,0:0:0:17,0:608,0:-55.052,-5.11751,0,-55.052,-5.11751,-55.052	1/2:22:0,12,10:0:0:12,10:428,354:-63.8667,-28.9832,-25.3708,-35.2373,0,-32.227	1/2:29:0,14,15:0:0:14,15:496,523:-82.224,-41.8403,-37.6259,-40.7313,0,-36.2158	1/2:202:0,103,99:0:0:103,99:3695,3542:-588.999,-287.626,-256.619,-301.73,0,-271.929	1/2:183:0,100,80:0:0:100,80:3565,2809:-515.826,-225.296,-195.193,-290.521,0,-266.439	1/2:119:0,53,66:0:0:53,66:1892,2328:-342.124,-187.971,-172.016,-154.507,0,-134.639	1/2:15:0,6,9:0:0:6,9:216,324:-44.0683,-26.4559,-24.6497,-17.9704,0,-15.2611	1/1:121:0,119,0:0:0:119,0:4235,0:-380.614,-35.8226,0,-380.614,-35.8226,-380.614	1/2:37:0,14,23:0:0:14,23:496,810:-106.39,-66.01,-61.7956,-40.7322,0,-33.8085	1/2:143:0,71,72:0:0:71,72:2531,2528:-410.843,-204.583,-183.209,-206.613,0,-184.939	1/2:51:0,32,19:0:0:32,19:1144,666:-147.611,-54.328,-44.695,-93.6357,0,-87.9161	1/2:54:0,29,25:0:0:29,25:1040,887:-156.99,-72.161,-63.4311,-85.1845,0,-77.6587	1/1:119:0,117,0:0:0:117,0:4183,0:-376.286,-35.2205,0,-376.286,-35.2205,-376.286	1/1:153:0,151,1:0:0:151,1:5372,36:-482.861,-45.4555,0,-479.946,-42.5401,-479.645	1/1:174:0,171,3:0:0:171,3:6111,90:-549.779,-51.4761,0,-542.595,-43.9911,-541.691	1/2:114:0,53,60:0:0:53,60:1900,2125:-327.557,-172.597,-156.642,-155.073,0,-137.011	1/2:169:0,96,73:0:0:96,73:3419,2575:-487.07,-208.398,-179.499,-279.025,0,-257.049	1/1:151:0,151,0:0:0:151,0:5379,0:-484.221,-45.4555,0,-484.221,-45.4555,-484.221	1/2:25:0,14,11:0:0:14,11:500,394:-73.0148,-32.2526,-28.0381,-41.1185,0,-37.8071	1/1:158:0,158,0:0:0:158,0:5648,0:-508.315,-47.5627,0,-508.315,-47.5627,-508.315	1/1:49:0,49,0:0:0:49,0:1748,0:-157.575,-14.7505,0,-157.575,-14.7505,-157.575	1/2:42:0,13,29:0:0:13,29:468,1011:-120.081,-81.8898,-77.9764,-38.5463,0,-29.8164	1/2:119:0,70,49:0:0:70,49:2512,1684:-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chr09	7142289	.	CGGGG	CGAGA,TGCGG	312877	PASS	AB=0.490606,0.500693;ABP=9.08883,3.04343;AC=128,60;AF=0.680851,0.319149;AN=188;AO=8271,3982;CIGAR=2M1X1M1X,1X1M1X2M;DP=12367;DPB=12366.8;DPRA=0,1.19622;EPP=17945.9,8632.45;EPPR=0;GTI=0;LEN=5,5;MEANALT=2.80851,3.08696;MQM=59.9875,59.8905;MQMR=0;NS=94;NUMALT=2;ODDS=11.4153;PAIRED=0,0;PAIREDR=0;PAO=0,1;PQA=0,36;PQR=0;PRO=0;QA=284546,138983;QR=0;RO=0;RPL=5542,2717;RPP=2080.49,1152.71;RPPR=0;RPR=2729,1265;RUN=1,1;SAF=5544,2717;SAP=2086.4,1152.71;SAR=2727,1265;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:43:0,18,25:0:0:18,25:621,882:-122.617,-72.1718,-66.7532,-50.7929,0,-43.2672	1/1:74:0,74,0:0:0:74,0:2579,0:-232.359,-22.2762,0,-232.359,-22.2762,-232.359	1/1:78:0,78,0:0:0:78,0:2677,0:-241.173,-23.4803,0,-241.173,-23.4803,-241.173	1/1:103:0,102,1:0:0:102,1:3555,36:-319.802,-30.7051,0,-316.865,-27.4078,-316.564	1/2:38:0,14,24:0:0:14,24:497,832:-108.469,-67.9698,-63.7554,-40.8506,0,-33.6259	1/2:25:0,15,10:0:0:15,10:534,339:-71.3602,-27.827,-23.3116,-43.8788,0,-40.8685	1/1:70:0,70,0:0:0:70,0:2458,0:-221.476,-21.0721,0,-221.476,-21.0721,-221.476	1/2:74:0,43,31:0:0:43,31:1506,1060:-208.914,-86.372,-73.4277,-122.887,0,-113.555	1/2:80:0,40,39:0:0:40,39:1356,1391:-223.33,-113.388,-101.347,-109.931,0,-98.1905	1/2:40:0,16,24:0:0:16,24:550,821:-111.642,-66.9789,-62.1624,-45.0065,0,-37.7817	1/2:319:0,168,148:0:0:168,148:5781,5161:-889.274,-419.786,-369.213,-469.533,0,-424.981	1/1:115:0,113,0:0:0:113,0:3917,0:-352.405,-34.0164,0,-352.405,-34.0164,-352.405	1/2:135:0,76,58:0:0:76,58:2643,2047:-381.57,-166.682,-143.803,-214.879,0,-197.42	1/2:128:0,58,69:0:0:58,69:2044,2390:-360.647,-194.225,-176.766,-166.412,0,-145.641	1/2:120:0,62,57:0:0:62,57:2170,2015:-340.655,-164.105,-145.441,-176.542,0,-159.383	1/2:116:0,57,59:0:0:57,59:2013,2058:-331.665,-167.73,-150.571,-164.286,0,-146.525	1/2:86:0,47,39:0:0:47,39:1626,1349:-242.096,-109.964,-95.8157,-132.478,0,-120.738	1/1:99:0,97,0:0:0:97,0:3346,0:-301.054,-29.1999,0,-301.054,-29.1999,-301.054	1/2:193:0,101,91:0:0:101,91:3520,3168:-543.997,-257.735,-227.331,-286.398,0,-259.004	1/2:79:0,41,38:0:0:41,38:1440,1341:-226.476,-109.276,-96.9338,-117.552,0,-106.113	1/2:79:0,37,40:0:0:37,40:1286,1376:-216.281,-111.727,-100.589,-104.541,0,-92.4994	1/2:13:0,6,7:0:0:6,7:196,252:-36.7347,-20.9217,-19.1156,-16.1548,0,-14.0476	1/1:49:0,49,0:0:0:49,0:1727,0:-155.71,-14.7505,0,-155.71,-14.7505,-155.71	1/2:64:0,30,34:0:0:30,34:1044,1205:-183.407,-98.5207,-89.4898,-85.2369,0,-75.0019	1/1:62:0,62,0:0:0:62,0:2141,0:-192.955,-18.6639,0,-192.955,-18.6639,-192.955	1/2:141:0,73,68:0:0:73,68:2485,2368:-394.488,-192.907,-170.932,-201.925,0,-181.455	1/1:148:0,147,1:0:0:147,1:5005,34:-450.272,-44.2514,0,-447.514,-41.1535,-447.213	1/2:51:0,24,27:0:0:24,27:842,935:-144.858,-76.334,-69.1092,-68.873,0,-60.7452	1/2:107:0,48,58:0:0:48,58:1648,1987:-295.073,-161.264,-146.814,-133.793,0,-116.333	1/2:65:0,36,29:0:0:36,29:1222,1007:-181.303,-82.2095,-71.3725,-99.4372,0,-90.7073	1/2:77:0,39,36:0:0:39,36:1348,1246:-210.801,-101.271,-89.5311,-109.553,0,-98.7163	1/1:260:0,259,0:0:0:259,0:8902,0:-800.853,-77.9668,0,-800.853,-77.9668,-800.853	1/2:314:0,132,176:0:0:132,176:4488,6190:-867.827,-503.805,-464.069,-364.039,0,-311.058	1/1:288:0,285,1:0:0:285,1:9668,36:-869.819,-85.7936,0,-866.882,-82.8262,-866.581	1/2:597:0,312,280:0:0:312,280:10423,9802:-1641.28,-797.487,-703.566,-843.842,0,-759.554	1/2:423:0,202,219:0:0:202,219:6804,7670:-1175.46,-624.154,-563.345,-551.391,0,-485.465	1/2:300:0,144,154:0:0:144,154:5039,5351:-845.022,-435.055,-391.706,-409.995,0,-363.636	1/2:57:0,35,21:0:0:35,21:1223,737:-159.592,-60.1034,-49.5674,-99.6117,0,-93.2901	1/2:275:0,145,127:0:0:145,127:4898,4443:-758.474,-361.49,-317.84,-397.025,0,-358.794	1/2:192:0,73,118:0:0:73,118:2494,4136:-538.924,-336.531,-314.556,-202.378,0,-166.856	1/1:74:0,73,0:0:0:73,0:2543,0:-228.758,-21.9752,0,-228.758,-21.9752,-228.758	1/2:174:0,79,92:0:0:79,92:2713,3264:-486.238,-265.954,-242.172,-220.299,0,-192.604	1/2:102:0,55,46:0:0:55,46:1898,1618:-285.89,-131.701,-115.144,-154.178,0,-140.331	1/2:115:0,53,60:0:0:53,60:1853,2078:-319.677,-168.931,-152.976,-150.798,0,-132.736	1/2:92:0,45,46:0:0:45,46:1557,1600:-256.701,-130.176,-116.63,-126.609,0,-112.762	1/1:51:0,51,0:0:0:51,0:1754,0:-158.139,-15.3525,0,-158.139,-15.3525,-158.139	1/1:81:0,79,2:0:0:79,2:2730,72:-245.583,-23.7814,0,-239.708,-17.5467,-239.106	1/1:58:0,58,0:0:0:58,0:2006,0:-180.811,-17.4597,0,-180.811,-17.4597,-180.811	1/2:31:0,13,17:0:0:13,17:432,578:-81.811,-46.8624,-42.949,-34.9266,0,-29.8091	1/2:64:0,39,24:0:0:39,24:1361,817:-176.952,-66.2527,-54.5125,-110.684,0,-103.46	1/1:47:0,45,1:0:0:45,1:1571,26:-141.367,-13.5464,0,-139.331,-11.5575,-139.03	1/2:237:0,105,129:0:0:105,129:3586,4558:-662.274,-371.275,-339.666,-291.064,0,-252.231	1/1:82:0,81,0:0:0:81,0:2793,0:-251.331,-24.3834,0,-251.331,-24.3834,-251.331	1/1:37:0,34,2:0:0:34,2:1117,72:-100.494,-10.235,0,-94.6169,-4.30021,-94.0149	1/2:69:0,32,36:0:0:32,36:1123,1220:-190.279,-98.8804,-89.2475,-91.4036,0,-80.5665	1/2:67:0,38,28:0:0:38,28:1334,953:-185.864,-77.2887,-65.8495,-108.56,0,-100.132	1/2:42:0,18,22:0:0:18,22:592,760:-109.614,-61.7766,-56.3581,-47.856,0,-41.2333	1/2:215:0,114,99:0:0:114,99:3839,3472:-593.618,-282.572,-248.254,-311.07,0,-281.268	1/2:123:0,60,62:0:0:60,62:2036,2187:-343.17,-178.071,-160.009,-165.085,0,-146.421	1/2:62:0,37,25:0:0:37,25:1296,820:-172.037,-66.5735,-55.4354,-105.801,0,-98.2751	1/2:141:0,82,58:0:0:82,58:2863,2017:-397.007,-164.129,-139.444,-233.013,0,-215.553	1/1:122:0,119,1:0:0:119,1:4050,36:-364.411,-35.8226,0,-361.473,-32.8469,-361.172	1/2:95:0,62,33:0:0:62,33:2153,1164:-270.152,-95.1322,-76.4684,-175.371,0,-165.437	1/2:88:0,41,45:0:0:41,45:1430,1575:-244.508,-128.204,-115.862,-116.364,0,-102.818	1/2:32:0,15,17:0:0:15,17:481,583:-86.4233,-47.674,-43.1586,-39.0803,0,-33.9628	1/1:51:0,51,0:0:0:51,0:1753,0:-158.049,-15.3525,0,-158.049,-15.3525,-158.049	1/2:110:0,54,56:0:0:54,56:1861,1987:-313.406,-162.247,-145.991,-151.509,0,-134.652	1/2:70:0,19,49:0:0:19,49:624,1668:-185.702,-135.286,-129.566,-50.4091,0,-35.6586	1/1:439:0,436,0:0:0:436,0:14886,0:-1339.21,-131.249,0,-1339.21,-131.249,-1339.21	1/1:48:0,46,0:0:0:46,0:1589,0:-142.936,-13.8474,0,-142.936,-13.8474,-142.936	1/2:144:0,75,68:0:0:75,68:2622,2359:-405.118,-191.816,-169.239,-213.368,0,-192.898	1/2:94:0,44,49:0:0:44,49:1480,1703:-258.334,-138.435,-125.19,-119.882,0,-105.131	1/1:35:0,34,0:0:0:34,0:1173,0:-105.512,-10.235,0,-105.512,-10.235,-105.512	1/2:32:0,9,23:0:0:9,23:319,790:-90.4816,-64.4904,-61.7811,-26.3424,0,-19.4187	1/1:89:0,89,0:0:0:89,0:3060,0:-275.631,-26.7917,0,-275.631,-26.7917,-275.631	1/1:68:0,66,0:0:0:66,0:2310,0:-207.799,-19.868,0,-207.799,-19.868,-207.799	1/2:81:0,37,42:0:0:37,42:1257,1475:-221.97,-120.068,-108.93,-101.916,0,-89.2728	1/2:53:0,33,20:0:0:33,20:1139,690:-148.932,-56.3985,-46.4645,-92.8788,0,-86.8582	1/1:213:0,208,0:0:0:208,0:7091,0:-638.009,-62.6142,0,-638.009,-62.6142,-638.009	1/1:54:0,53,0:0:0:53,0:1844,0:-165.908,-15.9546,0,-165.908,-15.9546,-165.908	1/2:65:0,29,36:0:0:29,36:1000,1272:-185.174,-103.944,-95.2145,-81.5783,0,-70.7413	1/1:154:0,153,1:0:0:153,1:5210,36:-468.689,-46.0576,0,-465.751,-42.7603,-465.45	1/2:97:0,37,59:0:0:37,59:1294,2035:-270.572,-165.299,-154.161,-105.26,0,-87.4997	1/1:162:0,161,0:0:0:161,0:5653,0:-508.687,-48.4658,0,-508.687,-48.4658,-508.687	1/2:141:0,63,78:0:0:63,78:2208,2717:-400.964,-221.296,-202.331,-180.017,0,-156.537	1/1:213:0,209,0:0:0:209,0:7323,0:-658.828,-62.9153,0,-658.828,-62.9153,-658.828	1/2:52:0,26,25:0:0:26,25:897,861:-142.785,-69.9152,-62.0885,-72.8554,0,-65.3297	1/2:130:0,73,57:0:0:73,57:2544,1990:-369.097,-162.209,-140.234,-207.236,0,-190.077	1/1:120:0,119,0:0:0:119,0:4149,0:-373.291,-35.8226,0,-373.291,-35.8226,-373.291	1/1:581:0,573,1:0:0:573,1:19650,36:-1767.8,-172.49,0,-1764.86,-169.549,-1764.56	1/2:772:0,376,391:0:0:376,391:12894,13688:-2160.48,-1113.68,-1000.49,-1046.83,0,-929.132	1/2:110:0,36,73:0:0:36,73:1230,2541:-306.443,-206.626,-195.789,-99.8205,0,-77.8453	1/1:129:0,125,0:0:0:125,0:4328,0:-389.365,-37.6288,0,-389.365,-37.6288,-389.365	1/1:182:0,181,0:0:0:181,0:6331,0:-569.533,-54.4864,0,-569.533,-54.4864,-569.533
chr09	7142296	.	C	T	86071.3	PASS	AB=0.500324;ABP=3.01733;AC=60;AF=0.319149;AN=188;AO=3881;CIGAR=1X;DP=12108;DPB=12108;DPRA=1.33946;EPP=8413.13;EPPR=17830.8;GTI=0;LEN=1;MEANALT=1.07042;MQM=59.8907;MQMR=59.9838;NS=94;NUMALT=1;ODDS=11.4069;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=138386;QR=293114;RO=8222;RPL=2668;RPP=1187.51;RPPR=2148.2;RPR=1213;RUN=1;SAF=2668;SAP=1187.51;SAR=1213;SRF=5537;SRP=2151.22;SRR=2685;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:41:17,24:17:593:24:860:-65.3796,0,-41.3525	0/0:73:73,0:73:2607:0:0:0,-21.9752,-234.877	0/0:79:79,0:79:2827:0:0:0,-23.7814,-254.668	0/0:103:101,2:101:3615:2:72:0,-24.1694,-318.718	0/1:35:14,21:14:504:21:741:-56.4755,0,-35.162	0/1:24:15,9:15:540:9:324:-22.2811,0,-41.7118	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.401	0/1:74:40,34:40:1428:34:1211:-87.015,0,-106.541	0/1:76:38,38:38:1360:38:1368:-100.542,0,-99.8223	0/1:39:16,23:16:576:23:812:-61.6607,0,-40.4348	0/1:311:168,143:168:5969:143:5101:-365.613,0,-443.684	0/0:112:112,0:112:3963:0:0:0,-33.7154,-356.853	0/1:130:77,53:77:2734:53:1908:-132.863,0,-207.168	0/1:125:57,68:57:1997:68:2440:-182.226,0,-142.371	0/1:116:62,54:62:2216:54:1936:-139.597,0,-164.785	0/1:113:57,56:57:2048:56:1996:-145.898,0,-150.575	0/1:82:45,37:45:1600:37:1311:-93.6024,0,-119.606	0/0:98:98,0:98:3516:0:0:0,-29.5009,-316.649	0/1:187:101,86:101:3602:86:3051:-218.508,0,-268.093	0/1:75:41,34:41:1464:34:1216:-87.166,0,-109.479	0/1:77:37,40:37:1332:40:1432:-105.98,0,-97.0031	0/1:11:8,3:8:284:3:108:-6.76384,0,-22.592	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.113	0/1:62:28,34:28:1000:34:1220:-91.4429,0,-71.6515	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/1:133:69,64:69:2461:64:2277:-165.154,0,-181.706	0/0:146:145,1:145:5187:1:36:0,-40.3521,-463.371	0/1:49:23,26:23:828:26:932:-69.4484,0,-60.0936	0/1:103:47,56:47:1671:56:2012:-150.329,0,-119.67	0/1:62:34,28:34:1220:28:1004:-72.012,0,-91.4429	0/1:76:40,36:40:1432:36:1266:-91.3533,0,-106.299	0/0:259:259,0:259:9217:0:0:0,-77.9668,-829.499	0/1:309:133,176:133:4771:176:6261:-470.422,0,-336.527	0/0:281:280,1:280:9907:1:36:0,-80.9912,-887.979	0/1:585:309,276:309:11006:276:9828:-708.052,0,-814.33	0/1:412:201,211:201:7179:211:7514:-552.279,0,-522.132	0/1:294:143,151:143:5111:151:5389:-396.638,0,-371.63	0/1:52:35,17:35:1251:17:608:-39.3985,0,-97.2407	0/1:269:144,125:144:5121:125:4406:-315.696,0,-380.047	0/1:190:74,116:74:2641:116:4168:-318.105,0,-180.74	0/0:73:73,0:73:2608:0:0:0,-21.9752,-234.968	0/1:171:81,90:81:2908:90:3224:-238.906,0,-210.434	0/1:97:55,42:55:1972:42:1504:-106.455,0,-148.555	0/1:115:53,62:53:1887:62:2213:-164.78,0,-135.489	0/1:91:46,45:46:1647:45:1598:-116.716,0,-121.124	0/0:50:49,1:49:1756:1:32:0,-11.8522,-155.125	0/0:80:78,2:78:2779:2:72:0,-17.2457,-243.514	0/0:57:57,0:57:2048:0:0:0,-17.1587,-184.592	0/1:31:13,18:13:451:18:639:-48.5063,0,-31.5879	0/1:59:38,21:38:1356:21:750:-50.063,0,-104.579	0/0:47:46,1:46:1643:1:36:0,-10.5501,-144.56	0/1:233:102,131:102:3610:131:4676:-350.852,0,-254.966	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193	0/0:36:34,2:34:1220:2:72:0,-4.00036,-103.27	0/1:65:32,33:32:1139:33:1178:-86.5708,0,-83.2514	0/1:63:37,26:37:1332:26:924:-64.5128,0,-101.217	0/1:39:19,20:19:676:20:720:-53.3886,0,-49.4278	0/1:212:114,97:114:4068:97:3472:-248.932,0,-302.547	0/1:121:60,61:60:2125:61:2173:-159.41,0,-155.092	0/1:62:37,25:37:1328:25:888:-61.5752,0,-101.158	0/1:139:81,58:81:2871:58:2080:-145.627,0,-216.782	0/0:121:119,1:119:4251:1:36:0,-32.8652,-379.191	0/1:94:61,33:61:2192:33:1184:-78.5669,0,-169.249	0/1:84:41,43:41:1441:43:1540:-113.607,0,-104.697	0/1:27:14,13:14:504:13:464:-33.9697,0,-37.5703	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/1:101:51,50:51:1817:50:1779:-129.988,0,-133.405	0/1:70:19,51:19:680:51:1803:-141.467,0,-40.4571	0/0:433:430,2:430:15312:2:68:0,-123.94,-1371.33	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/1:142:73,68:73:2624:68:2415:-174.8,0,-193.602	0/1:93:44,49:44:1567:49:1729:-127.89,0,-113.325	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/1:32:9,23:9:324:23:820:-64.4896,0,-19.8729	0/0:87:87,0:87:3090:0:0:0,-26.1896,-278.326	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.663	0/1:78:38,40:38:1341:40:1432:-105.696,0,-97.4029	0/1:52:33,19:33:1180:19:661:-44.1581,0,-90.8545	0/0:211:211,0:211:7501:0:0:0,-63.5173,-675.135	0/0:53:53,0:53:1874:0:0:0,-15.9546,-168.935	0/1:63:29,34:29:1032:34:1205:-89.7881,0,-74.2286	0/0:150:149,1:149:5321:1:36:0,-41.5562,-475.425	0/1:98:38,60:38:1364:60:2140:-163.367,0,-93.5598	0/0:161:161,0:161:5705:0:0:0,-48.4658,-513.568	0/1:139:62,77:62:2170:77:2752:-206.079,0,-153.721	0/0:212:212,0:212:7575:0:0:0,-63.8184,-681.788	0/1:49:26,23:26:924:23:824:-59.731,0,-68.7272	0/1:122:68,54:68:2444:54:1932:-137.426,0,-183.489	0/0:119:119,0:119:4238:0:0:0,-35.8226,-381.6	0/0:576:575,1:575:20498:1:36:0,-169.795,-1840.72	0/1:764:374,389:374:13335:389:13851:-1016.45,0,-970.031	0/1:109:37,72:37:1307:72:2584:-199.997,0,-85.1185	0/0:129:129,0:129:4612:0:0:0,-38.8329,-415.245	0/0:180:180,0:180:6406:0:0:0,-54.1854,-576.62
chr09	7904767	.	A	G	258778	PASS	AB=0.520194;ABP=82.0279;AC=60;AF=0.319149;AN=188;AO=11641;CIGAR=1X;DP=37473;DPB=37473;DPRA=1.18615;EPP=25272.4;EPPR=56076.9;GTI=0;LEN=1;MEANALT=1.11842;MQM=59.9718;MQMR=59.9865;NS=94;NUMALT=1;ODDS=24.914;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=403770;QR=922049;RO=25823;RPL=6428;RPP=278.38;RPPR=490.202;RPR=5213;RUN=1;SAF=6427;SAP=277.474;SAR=5214;SRF=14115;SRP=490.202;SRR=11708;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:226:101,125:101:3598:125:4368:-325.265,0,-255.994	0/0:651:651,0:651:23262:0:0:0,-195.971,-2092.8	0/0:509:508,1:508:18148:1:21:0,-151.124,-1630.81	0/0:862:861,1:861:30797:1:36:0,-255.89,-2767.16	0/1:250:121,129:121:4312:129:4480:-328.119,0,-312.998	0/1:176:89,87:89:3149:87:2963:-213.918,0,-230.652	0/0:442:441,1:441:15738:1:36:0,-129.457,-1412.51	0/1:644:348,295:348:12424:295:10224:-726.186,0,-924.076	0/1:498:213,285:213:7561:285:9948:-745.357,0,-530.621	0/1:356:163,193:163:5768:193:6693:-495.292,0,-412.072	0/1:181:84,97:84:2989:97:3296:-242.379,0,-214.755	0/0:371:371,0:371:13248:0:0:0,-111.682,-1192.12	0/1:297:133,164:133:4752:164:5705:-424.173,0,-338.433	0/1:207:109,98:109:3888:98:3370:-241.208,0,-287.802	0/1:307:162,145:162:5803:145:5057:-362.867,0,-429.958	0/1:214:113,101:113:4015:101:3468:-247.916,0,-297.118	0/1:204:106,98:106:3782:98:3324:-237.976,0,-279.168	0/0:185:185,0:185:6606:0:0:0,-55.6905,-594.621	0/1:137:70,67:70:2504:67:2328:-168.536,0,-184.371	0/1:1085:474,611:474:16922:611:21349:-1594.25,0,-1196.01	0/1:874:454,420:454:16256:420:14636:-1053.91,0,-1199.61	0/1:349:91,258:91:3247:258:8955:-700.894,0,-187.392	0/0:454:451,3:451:16099:3:108:0,-126.592,-1438.52	0/1:530:316,214:316:11315:214:7422:-508.471,0,-858.682	0/0:320:319,1:319:11426:1:36:0,-92.7313,-1024.62	0/1:1375:714,660:714:25505:660:22900:-1646.53,0,-1880.79	0/0:888:888,0:888:31756:0:0:0,-267.315,-2857.06	0/1:160:88,72:88:3164:72:2445:-172.142,0,-236.818	0/1:1078:485,592:485:17379:592:20752:-1542.64,0,-1239.16	0/1:446:200,246:200:7130:246:8530:-632.524,0,-507.344	0/1:564:300,264:300:10706:264:9258:-663.425,0,-793.668	0/0:25:25,0:25:881:0:0:0,-7.52575,-79.6059	0/1:97:36,61:36:1283:61:2155:-165.015,0,-86.5727	0/0:28:28,0:28:996:0:0:0,-8.42884,-89.9549	0/1:34:9,25:9:320:25:858:-67.2957,0,-18.9073	0/1:82:41,41:41:1464:41:1436:-104.841,0,-107.372	0/1:802:422,379:422:15080:379:13099:-937.276,0,-1115.44	0/1:490:209,281:209:7462:281:9636:-719.722,0,-524.121	0/1:202:115,87:115:4111:87:2978:-207.433,0,-309.367	0/1:15:8,7:8:288:7:228:-16.3221,0,-21.752	0/0:659:659,0:659:23535:0:0:0,-198.379,-2116.66	0/1:120:60,60:60:2127:60:2045:-148.194,0,-155.575	0/1:771:351,420:351:12556:420:14610:-1082.59,0,-897.774	0/1:309:172,137:172:6142:137:4604:-321.499,0,-459.862	0/1:260:125,135:125:4476:135:4607:-336.539,0,-324.742	0/0:445:445,0:445:15906:0:0:0,-133.958,-1431.23	0/0:478:476,2:476:16974:2:72:0,-137.056,-1520.47	0/0:626:616,10:616:22013:10:345:0,-157.064,-1949.22	0/1:337:163,174:163:5797:174:6017:-440.203,0,-420.31	0/1:510:245,265:245:8733:265:9148:-669.795,0,-632.436	0/0:624:622,2:622:22229:2:72:0,-181.006,-1993.17	0/1:62:23,39:23:815:39:1370:-104.933,0,-55.0069	0/0:730:729,1:729:26107:1:21:0,-217.652,-2346.78	0/0:215:215,0:215:7691:0:0:0,-64.7214,-692.224	0/1:49:32,17:32:1135:17:612:-40.663,0,-87.7076	0/1:561:272,289:272:9680:289:10092:-739.355,0,-702.276	0/1:264:125,139:125:4480:139:4854:-357.548,0,-323.897	0/1:56:28,28:28:996:28:957:-69.5777,0,-73.0972	0/1:75:34,41:34:1220:41:1408:-104.433,0,-87.5296	0/1:325:161,163:161:5717:163:5675:-412.984,0,-416.755	0/1:328:188,140:188:6707:140:4825:-335.674,0,-504.968	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:584:262,322:262:9370:322:11252:-836.785,0,-667.462	0/1:781:417,363:417:14870:363:12587:-897.532,0,-1102.87	0/1:333:139,193:139:4949:193:6715:-504.123,0,-345.256	0/0:374:373,1:373:13357:1:36:0,-108.987,-1198.32	0/1:781:362,419:362:12872:419:14563:-1075.35,0,-923.172	0/1:466:137,329:137:4900:329:11504:-894.917,0,-300.87	0/0:141:141,0:141:5016:0:0:0,-42.4452,-451.587	0/0:451:451,0:451:16108:0:0:0,-135.765,-1449.4	0/1:217:95,122:95:3380:122:4127:-306.291,0,-239.091	0/1:58:28,30:28:996:30:1051:-77.4031,0,-72.4951	0/0:489:489,0:489:17450:0:0:0,-147.204,-1570.13	0/1:334:178,156:178:6331:156:5476:-392.43,0,-469.068	0/0:753:752,1:752:26786:1:36:0,-223.077,-2406.37	0/0:725:725,0:725:25943:0:0:0,-218.247,-2334.09	0/1:328:142,185:142:5078:185:6423:-479.317,0,-358.367	0/1:468:194,273:194:6950:273:9417:-706.581,0,-484.195	0/0:55:55,0:55:1972:0:0:0,-16.5566,-177.755	0/0:588:587,1:587:20946:1:36:0,-173.407,-1881.01	0/1:406:165,241:165:5879:241:8482:-641.175,0,-407.003	0/0:832:830,2:830:29604:2:72:0,-243.62,-2656.62	0/1:298:158,140:158:5638:140:4764:-339.226,0,-417.835	0/0:289:288,1:288:10286:1:36:0,-83.3994,-922.069	0/1:343:167,176:167:5954:176:6015:-438.223,0,-432.714	0/0:570:563,7:563:20053:7:252:0,-148.558,-1781.26	0/1:110:71,39:71:2532:39:1322:-86.1597,0,-195.004	0/1:287:144,143:144:5151:143:4892:-354.051,0,-377.335	0/0:295:295,0:295:10488:0:0:0,-88.8038,-943.842	0/0:123:123,0:123:4404:0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chr09	7904774	.	A	G	665399	PASS	AB=0.462659;ABP=280;AC=128;AF=0.680851;AN=188;AO=25496;CIGAR=1X;DP=37835;DPB=37835;DPRA=0;EPP=55366.9;EPPR=26729.5;GTI=0;LEN=1;MEANALT=1.24468;MQM=59.9861;MQMR=59.9647;NS=94;NUMALT=1;ODDS=10.9293;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=903815;QR=438815;RO=12312;RPL=13586;RPP=242.248;RPPR=86.0095;RPR=11910;RUN=1;SAF=13586;SAP=242.248;SAR=11910;SRF=6498;SRP=85.5263;SRR=5814;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:219:123,96:123:4391:96:3430:-242.988,0,-329.438	1/1:646:1,644:1:36:644:22942:-2060.27,-190.926,0	1/1:492:0,492:0:0:492:17583:-1582.09,-148.107,0	1/1:864:2,861:2:72:861:30505:-2737.72,-253.312,0	0/1:256:135,121:135:4838:121:4270:-307.417,0,-358.509	0/1:179:91,88:91:3237:88:3123:-227.411,0,-237.659	1/1:442:0,441:0:0:441:15678:-1410.37,-132.754,0	0/1:644:310,334:310:11037:334:11860:-873.408,0,-799.321	0/1:502:302,200:302:10775:200:7077:-485.883,0,-818.339	0/1:366:204,162:204:7226:162:5773:-409.509,0,-540.209	0/1:186:105,81:105:3755:81:2863:-201.915,0,-282.158	1/1:357:0,357:0:0:357:12667:-1139.87,-107.468,0	0/1:294:167,127:167:5963:127:4492:-315.95,0,-448.275	0/1:219:108,111:108:3807:111:3956:-290.308,0,-276.905	0/1:318:157,161:157:5599:161:5725:-419.634,0,-408.298	0/1:222:108,114:108:3850:114:4060:-298.761,0,-279.863	0/1:207:104,103:104:3685:103:3664:-267.653,0,-269.541	1/1:179:0,179:0:0:179:6384:-574.651,-53.8844,0	0/1:138:70,68:70:2500:68:2428:-177.234,0,-183.711	0/1:1093:627,465:627:22337:465:16492:-1154.87,0,-1680.67	0/1:894:445,449:445:15815:449:15763:-1149.27,0,-1153.93	0/1:366:273,93:273:9709:93:3314:-188.301,0,-763.587	1/1:451:2,449:2:72:449:15934:-1426.92,-128.928,0	0/1:540:225,314:225:8008:314:11104:-836.645,0,-558.102	1/1:315:1,314:1:36:314:11113:-996.475,-91.2262,0	0/1:1443:724,719:724:25889:719:25493:-1859.29,0,-1894.89	1/1:875:1,874:1:36:874:30856:-2772.55,-259.803,0	0/1:167:77,89:77:2737:89:3144:-232.853,0,-196.241	0/1:1102:616,486:616:21945:486:17283:-1223.38,0,-1642.76	0/1:462:261,201:261:9309:201:7165:-505.675,0,-698.702	0/1:574:279,293:279:9911:293:10318:-756.008,0,-719.388	1/1:25:0,25:0:0:25:892:-80.5997,-7.52575,0	0/1:98:62,36:62:2223:36:1284:-86.3625,0,-170.833	1/1:27:1,26:1:36:26:916:-79.1582,-4.52954,0	0/1:37:28,9:28:1000:9:316:-17.6407,0,-79.1773	0/1:79:40,39:40:1424:39:1387:-101.347,0,-104.653	0/1:828:409,419:409:14574:419:14784:-1081.07,0,-1061.66	0/1:509:294,215:294:10516:215:7594:-530.279,0,-793.127	0/1:206:92,114:92:3296:114:4016:-299.622,0,-234.834	0/1:15:8,7:8:288:7:248:-18.1487,0,-21.752	1/1:648:0,648:0:0:648:23047:-2073.63,-195.067,0	0/1:128:68,60:68:2406:60:2124:-152.895,0,-178.265	0/1:801:450,351:450:16088:351:12432:-877.597,0,-1206.47	0/1:312:137,175:137:4870:175:6169:-461.395,0,-344.512	0/1:262:136,126:136:4860:126:4475:-324.051,0,-358.685	1/1:438:0,437:0:0:437:15421:-1387.26,-131.55,0	1/1:469:1,467:1:36:467:16567:-1487.09,-137.644,0	1/1:611:7,604:7:248:604:21330:-1896.52,-161.265,0	0/1:347:186,161:186:6624:161:5740:-412.071,0,-491.784	0/1:527:289,238:289:10282:238:8474:-604.021,0,-766.668	1/1:620:3,616:3:99:616:21903:-1961.47,-177.453,0	0/1:63:40,23:40:1424:23:806:-53.8933,0,-109.493	1/1:729:1,726:1:36:726:25896:-2326.32,-215.61,0	1/1:211:1,209:1:36:209:7373:-660.027,-59.9779,0	0/1:48:18,30:18:644:30:1068:-81.9826,0,-43.8412	0/1:575:307,268:307:10945:268:9511:-682.864,0,-811.854	0/1:272:151,120:151:5347:120:4264:-302.15,0,-399.576	0/1:57:28,29:28:1004:29:1021:-75.0415,0,-73.5172	0/1:74:40,34:40:1436:34:1216:-87.4703,0,-107.261	0/1:333:172,161:172:6111:161:5733:-415.843,0,-449.851	0/1:329:144,185:144:5135:185:6559:-491.358,0,-363.252	1/1:27:0,27:0:0:27:951:-85.9043,-8.12781,0	0/1:599:337,262:337:12038:262:9254:-652.521,0,-902.956	0/1:816:398,418:398:14184:418:14798:-1085.7,0,-1030.67	0/1:335:201,134:201:7199:134:4753:-327.083,0,-547.101	1/1:374:1,373:1:36:373:13236:-1187.44,-108.987,0	0/1:811:451,359:451:16051:359:12688:-897.54,0,-1200.07	0/1:482:347,135:347:12365:135:4787:-285.892,0,-967.171	1/1:139:0,139:0:0:139:4922:-443.133,-41.8432,0	1/1:443:0,442:0:0:442:15742:-1416.13,-133.055,0	0/1:230:133,96:133:4732:96:3383:-235.363,0,-356.735	0/1:59:31,28:31:1108:28:991:-71.7428,0,-82.1839	1/1:471:0,469:0:0:469:16626:-1495.66,-141.183,0	0/1:332:163,169:163:5824:169:6019:-441.876,0,-424.315	1/1:743:0,742:0:0:742:26206:-2357.47,-223.364,0	1/1:717:0,717:0:0:717:25489:-2293.3,-215.839,0	0/1:327:190,137:190:6776:137:4880:-340.919,0,-511.097	0/1:498:307,191:307:10916:191:6803:-462.003,0,-832.432	1/1:52:0,52:0:0:52:1848:-166.6,-15.6536,0	1/1:582:0,582:0:0:582:20560:-1849.91,-175.199,0	0/1:408:248,159:248:8867:159:5646:-385.386,0,-675.03	1/1:825:2,823:2:72:823:29163:-2616.99,-241.513,0	0/1:303:144,159:144:5132:159:5647:-417.141,0,-370.813	1/1:281:0,281:0:0:281:9933:-893.922,-84.5894,0	0/1:356:188,168:188:6691:168:5934:-427.006,0,-495.099	1/1:572:8,562:8:276:562:19802:-1756.51,-146.769,0	0/1:110:39,71:39:1387:71:2528:-194.623,0,-92.0149	0/1:285:147,138:147:5264:138:4873:-352.933,0,-388.099	1/1:288:0,288:0:0:288:10270:-924.231,-86.6966,0	1/1:120:0,120:0:0:120:423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chr09	7940637	.	A	T	134174	PASS	AB=0.411001;ABP=427.02;AC=127;AF=0.675532;AN=188;AO=6645;CIGAR=1X;DP=10303;DPB=10303;DPRA=0;EPP=14432.4;EPPR=7939.74;GTI=1;LEN=1;MEANALT=1.02128;MQM=56.4519;MQMR=59.9921;NS=94;NUMALT=1;ODDS=0.848027;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=237615;QR=130546;RO=3655;RPL=5;RPP=14389;RPPR=7931.06;RPR=6640;RUN=1;SAF=5;SAP=14389;SAR=6640;SRF=1;SRP=7931.06;SRR=3654;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:86:40,46:40:1424:46:1648:-122.564,0,-102.569	1/1:84:1,83:1:36:83:2971:-263.883,-21.6882,0	1/1:161:0,161:0:0:161:5755:-517.632,-48.4658,0	1/1:222:2,220:2:72:220:7873:-700.672,-59.9919,0	0/1:122:65,57:65:2323:57:2036:-146.497,0,-172.604	0/1:67:37,30:37:1328:30:1072:-76.5974,0,-99.6528	1/1:161:1,160:1:36:160:5703:-509.222,-44.8676,0	0/1:185:112,73:112:3966:73:2619:-179.734,0,-301.441	0/1:167:88,79:88:3147:79:2821:-203.612,0,-233.183	0/1:82:56,26:56:1999:26:910:-57.4055,0,-155.499	0/1:83:41,42:41:1459:42:1503:-110.295,0,-106.62	1/1:63:0,63:0:0:63:2255:-203.1,-18.9649,0	0/1:51:28,23:28:1008:23:824:-59.1118,0,-75.6838	0/1:62:40,22:40:1400:22:792:-52.8944,0,-107.63	0/1:42:24,18:24:864:18:648:-45.8987,0,-65.4393	0/1:49:30,19:30:1072:19:676:-46.3542,0,-82.042	0/1:52:32,20:32:1148:20:711:-48.5589,0,-87.9763	1/1:41:0,41:0:0:41:1468:-132.244,-12.3422,0	0/1:36:26,10:26:932:10:356:-21.5361,0,-73.3618	0/1:245:160,85:160:5727:85:3044:-200.241,0,-441.794	0/1:93:35,58:35:1243:58:2076:-158.457,0,-84.1781	0/1:131:97,34:97:3472:34:1212:-69.6903,0,-273.257	1/1:117:1,116:1:36:116:4131:-368.068,-31.6222,0	0/1:182:105,77:105:3748:77:2756:-193.226,0,-282.731	1/1:118:1,117:1:36:117:4188:-372.92,-31.9233,0	0/1:294:170,124:170:6103:124:4406:-307.995,0,-460.85	1/1:287:2,285:2:72:285:10220:-911.655,-79.5589,0	0/1:46:25,21:25:896:21:752:-54.128,0,-67.1023	0/1:318:192,126:192:6892:126:4504:-309.434,0,-524.618	0/1:134:67,67:67:2395:67:2373:-173.228,0,-175.468	0/1:153:102,51:102:3641:51:1828:-118.066,0,-281.836	1/1:23:0,23:0:0:23:820:-74.0688,-6.92369,0	0/1:35:15,20:15:540:20:712:-53.8423,0,-38.4005	1/1:9:0,9:0:0:9:320:-29.1347,-2.70927,0	0/1:12:5,7:5:180:7:252:-19.3414,0,-12.9397	0/1:25:18,7:18:648:7:252:-15.4968,0,-51.1261	0/1:203:134,69:134:4780:69:2473:-161.514,0,-369.247	0/1:176:79,97:79:2810:97:3459:-258.304,0,-200.158	0/1:62:33,29:33:1163:29:1035:-74.7047,0,-86.3123	0/1:15:11,4:11:396:4:144:-8.79184,0,-31.4673	1/1:141:0,141:0:0:141:5043:-453.234,-42.4452,0	0/1:45:21,24:21:748:24:864:-64.3206,0,-54.0989	0/1:194:109,85:109:3869:85:3044:-214.97,0,-290.006	0/1:45:29,16:29:1040:16:576:-38.1006,0,-80.368	0/1:53:30,23:30:1063:23:828:-58.8257,0,-80.0262	1/1:342:0,342:0:0:342:12238:-1099.94,-102.952,0	1/1:108:0,108:0:0:108:3856:-345.657,-32.5112,0	1/1:227:0,227:0:0:227:8086:-725.904,-68.3338,0	0/1:172:81,91:81:2892:91:3260:-241.642,0,-208.74	0/1:174:108,66:108:3861:66:2368:-160.145,0,-295.305	1/1:391:0,391:0:0:391:13972:-1254.58,-117.703,0	0/1:17:10,7:10:360:7:252:-17.8956,0,-27.6268	1/1:143:0,143:0:0:143:5128:-461.432,-43.0473,0	1/1:20:0,20:0:0:20:720:-65.0924,-6.0206,0	0/1:38:19,19:19:684:19:676:-49.7107,0,-50.4512	0/1:160:104,56:104:3708:56:2008:-132.648,0,-285.756	0/1:82:50,32:50:1800:32:1152:-79.1487,0,-137.598	0/1:18:7,11:7:248:11:396:-30.5513,0,-17.2457	0/1:27:11,16:11:396:16:576:-43.9772,0,-27.8549	0/1:97:56,41:56:1995:41:1476:-103.873,0,-150.623	0/1:102:54,48:54:1931:48:1728:-124.894,0,-143.361	1/1:13:0,13:0:0:13:468:-42.4298,-3.91339,0	0/1:80:47,33:47:1680:33:1163:-80.7897,0,-127.405	0/1:376:221,155:221:7899:155:5544:-385.221,0,-597.747	0/1:93:44,49:44:1565:49:1754:-129.949,0,-113.144	1/1:69:1,67:1:36:67:2396:-211.674,-17.2315,0	0/1:212:137,75:137:4897:75:2684:-177.644,0,-377.062	0/1:30:22,8:22:788:8:288:-17.1064,0,-62.2139	1/1:16:0,16:0:0:16:568:-51.4001,-4.81648,0	1/1:38:0,38:0:0:38:1368:-123.371,-11.4391,0	0/1:86:60,26:60:2148:26:936:-58.592,0,-167.699	0/0:14:13,1:13:464:1:36:0,-0.61874,-38.5018	1/1:248:0,248:0:0:248:8867:-797.284,-74.6554,0	0/1:58:37,21:37:1324:21:756:-50.8571,0,-102.002	1/1:268:0,268:0:0:268:9570:-858.242,-80.676,0	1/1:112:0,112:0:0:112:3982:-357.888,-33.7154,0	0/1:135:88,47:88:3152:47:1684:-111.168,0,-243.266	0/1:74:39,35:39:1382:35:1256:-90.8653,0,-102.401	1/1:13:0,13:0:0:13:468:-42.4483,-3.91339,0	1/1:93:1,92:1:36:92:3290:-292.186,-24.3975,0	0/1:119:90,29:90:3227:29:1044:-57.7158,0,-254.828	1/1:230:1,227:1:36:227:8092:-722.649,-65.3897,0	0/1:110:68,42:68:2427:42:1500:-101.943,0,-185.572	1/1:43:0,43:0:0:43:1536:-138.331,-12.9443,0	0/1:76:50,26:50:1756:26:936:-61.5866,0,-135.443	1/1:124:0,124:0:0:124:4431:-398.606,-37.3277,0	0/1:35:22,13:22:792:13:464:-31.5361,0,-61.0696	0/1:82:41,41:41:1464:41:1472:-107.194,0,-107.372	1/1:50:0,50:0:0:50:1796:-161.768,-15.0515,0	1/1:31:0,31:0:0:31:1112:-100.277,-9.33193,0	0/1:93:53,40:53:1874:40:1440:-101.703,0,-140.942	0/1:72:55,17:55:1976:17:604:-32.8116,0,-156.44	1/1:37:0,37:0:0:37:1313:-118.391,-11.1381,0	1/1:83:1,82:1:36:82:2952:-261.817,-21.3872,0
chr09	9132559	.	T	C	468672	PASS	AB=0.478419;ABP=65.3378;AC=128;AF=0.680851;AN=188;AO=17944;CIGAR=1X;DP=26016;DPB=26016;DPRA=0;EPP=38915.8;EPPR=17446.5;GTI=1;LEN=1;MEANALT=1.10638;MQM=58.5347;MQMR=59.888;NS=94;NUMALT=1;ODDS=1.58256;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=634939;QR=288190;RO=8061;RPL=8336;RPP=198.809;RPPR=12.8376;RPR=9608;RUN=1;SAF=8330;SAP=202.52;SAR=9614;SRF=3928;SRP=14.331;SRR=4133;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:107:56,51:56:1999:51:1788:-128.899,0,-147.973	1/1:661:0,661:0:0:661:23493:-2111.27,-198.981,0	1/1:394:0,393:0:0:393:13914:-1250.9,-118.305,0	1/1:555:1,554:1:36:554:19694:-1767.33,-163.473,0	0/1:224:117,107:117:4192:107:3799:-274.576,0,-310.002	0/1:155:83,72:83:2972:72:2547:-182.586,0,-221.053	1/1:360:1,358:1:36:358:12670:-1136.24,-104.831,0	0/1:506:238,267:238:8492:267:9452:-697.631,0,-611.893	0/1:219:104,115:104:3724:115:4065:-299.775,0,-268.655	0/1:262:155,107:155:5536:107:3794:-262.015,0,-419.494	0/1:140:77,63:77:2760:63:2213:-157.115,0,-206.497	1/1:172:0,172:0:0:172:6061:-544.949,-51.7772,0	0/1:173:82,91:82:2926:91:3223:-237.896,0,-211.482	0/1:147:76,71:76:2708:71:2483:-178.982,0,-199.604	0/1:141:88,52:88:3151:52:1832:-122.696,0,-241.401	0/1:143:74,69:74:2640:69:2409:-173.91,0,-194.797	0/1:163:89,74:89:3188:74:2549:-180.328,0,-238.071	1/1:110:0,110:0:0:110:3873:-348.511,-33.1133,0	0/1:116:50,66:50:1787:66:2344:-176.203,0,-126.188	0/1:708:402,306:402:14412:306:10882:-765.999,0,-1083.69	0/1:501:263,238:263:9390:238:8414:-605.877,0,-694.009	0/1:267:181,86:181:6487:86:3054:-194.674,0,-503.409	1/1:226:0,225:0:0:225:7959:-714.479,-67.7318,0	0/1:399:221,178:221:7861:178:6295:-446.286,0,-587.372	1/1:242:0,242:0:0:242:8580:-770.282,-72.8493,0	0/1:919:472,447:472:16909:447:15771:-1141.67,0,-1244.37	1/1:517:1,516:1:36:516:18255:-1638.18,-152.034,0	0/1:96:51,45:51:1832:45:1588:-114.235,0,-136.259	0/1:904:467,436:467:16685:436:15422:-1115.08,0,-1228.74	0/1:282:136,146:136:4862:146:5176:-380.492,0,-352.838	0/1:322:172,149:172:6139:149:5286:-378.426,0,-455.608	1/1:7:0,7:0:0:7:252:-23.0262,-2.10721,0	0/1:23:13,10:13:460:10:341:-24.091,0,-34.8099	1/1:15:0,15:0:0:15:518:-46.9016,-4.51545,0	0/1:16:8,8:8:280:8:288:-21.4344,0,-20.6356	0/1:11:6,5:6:216:5:180:-13.236,0,-16.4792	0/1:467:233,234:233:8360:234:8195:-596.71,0,-611.822	0/1:475:248,227:248:8848:227:8080:-584.027,0,-652.881	0/1:170:80,90:80:2853:90:3178:-234.852,0,-205.827	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	1/1:658:1,656:1:36:656:23210:-2082.52,-194.538,0	0/1:94:53,41:53:1904:41:1464:-103.573,0,-143.339	0/1:463:235,228:235:8368:228:8084:-587.827,0,-613.736	0/1:205:91,114:91:3256:114:4033:-301.412,0,-231.55	0/1:172:80,92:80:2849:92:3253:-241.02,0,-204.834	1/1:310:0,310:0:0:310:10994:-988.04,-93.3193,0	1/1:253:0,253:0:0:253:8962:-805.774,-76.1606,0	1/1:410:2,408:2:72:408:14447:-1292.74,-116.586,0	0/1:326:160,166:160:5712:166:5911:-433.92,0,-416.061	0/1:456:226,230:226:8086:230:8168:-597.57,0,-590.485	1/1:466:0,466:0:0:466:16442:-1478.89,-140.28,0	0/1:22:3,19:3:108:19:680:-54.9061,0,-3.45251	1/1:650:1,647:1:36:647:23036:-2066.24,-191.847,0	1/1:81:0,81:0:0:81:2853:-256.947,-24.3834,0	0/1:25:12,13:12:432:13:441:-32.4736,0,-31.6954	0/1:464:223,241:223:7974:241:8491:-624.221,0,-577.37	0/1:118:51,67:51:1819:67:2392:-179.706,0,-128.459	0/1:18:11,7:11:396:7:248:-17.2457,0,-30.5642	0/1:40:16,24:16:576:24:839:-63.7723,0,-40.1338	0/1:163:80,83:80:2839:83:2957:-217.067,0,-206.681	0/1:232:122,110:122:4380:110:3907:-281.902,0,-324.532	1/1:17:0,17:0:0:17:604:-54.6471,-5.11751,0	0/1:424:214,210:214:7665:210:7432:-541.128,0,-562.246	0/1:551:288,263:288:10313:263:9313:-671.932,0,-760.89	0/1:195:95,100:95:3404:100:3533:-259.283,0,-247.81	1/1:287:0,287:0:0:287:10128:-911.309,-86.3956,0	0/1:562:313,249:313:11176:249:8823:-624.715,0,-835.254	0/1:287:183,104:183:6572:104:3666:-243.694,0,-505.163	1/1:50:0,50:0:0:50:1739:-156.658,-15.0515,0	1/1:259:0,259:0:0:259:9223:-829.229,-77.9668,0	0/1:180:89,91:89:3192:91:3185:-232.566,0,-233.313	0/1:37:9,28:9:324:28:992:-78.4563,0,-18.3677	1/1:235:2,233:2:72:233:8186:-729.286,-63.9053,0	0/1:161:93,68:93:3324:68:2414:-168.704,0,-250.867	1/1:490:5,485:5:180:485:17055:-1516.54,-130.953,0	1/1:603:1,602:1:36:602:21413:-1921.93,-177.923,0	0/1:369:166,203:166:5944:203:7248:-540.588,0,-423.893	0/1:363:193,170:193:6895:170:6036:-433.744,0,-511.34	1/1:22:0,22:0:0:22:788:-71.2127,-6.62266,0	1/1:428:1,427:1:36:427:15171:-1360.41,-125.243,0	0/1:352:185,167:185:6624:167:5913:-426.021,0,-490.266	1/1:763:1,762:1:36:762:26926:-2416.82,-226.088,0	0/1:225:127,98:127:4534:98:3449:-242.669,0,-340.408	1/1:121:1,120:1:36:120:4203:-374.619,-32.8264,0	0/1:218:119,99:119:4245:99:3428:-242.908,0,-316.592	1/1:432:12,420:12:419:420:14779:-1290.66,-92.0023,0	0/1:101:55,46:55:1964:46:1610:-114.714,0,-146.629	0/1:169:75,94:75:2692:94:3335:-248.989,0,-191.65	1/1:181:0,181:0:0:181:6371:-573.008,-54.4864,0	1/1:81:0,81:0:0:81:2830:-254.512,-24.3834,0	0/1:185:97,88:97:3458:88:3117:-224.578,0,-255.738	0/1:169:121,47:121:4285:47:1661:-98.8009,0,-334.894	1/1:321:0,321:0:0:321:11375:-1022.85,-96.6306,0	1/1:232:0,232:0:0:232:8228:-740.24,-69.839,0
chr09	9341407	.	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chr09	9341435	.	A	G	76606.7	PASS	AB=0.53307;ABP=82.2886;AC=60;AF=0.319149;AN=188;AO=4464;CIGAR=1X;DP=12984;DPB=12984;DPRA=1.14211;EPP=9696.46;EPPR=18490.9;GTI=0;LEN=1;MEANALT=1.08696;MQM=59.7897;MQMR=59.9513;NS=94;NUMALT=1;ODDS=1.49116;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=159138;QR=305062;RO=8514;RPL=4464;RPP=9696.46;RPPR=18490.9;RPR=0;RUN=1;SAF=0;SAP=9696.46;SAR=4464;SRF=0;SRP=18490.9;SRR=8514;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:32,13:32:1144:13:464:-28.4144,0,-89.7232	0/0:224:224,0:224:7976:0:0:0,-67.4307,-717.752	0/0:219:218,1:218:7805:1:36:0,-62.3391,-698.873	0/0:203:203,0:203:7265:0:0:0,-61.1091,-653.901	0/1:132:61,70:61:2177:70:2500:-185.458,0,-156.355	0/1:131:49,82:49:1739:82:2920:-223.596,0,-117.359	0/0:133:131,2:131:4712:2:68:0,-33.5842,-417.781	0/1:216:115,101:115:4116:101:3616:-260.592,0,-305.602	0/1:134:76,58:76:2724:58:2052:-144.602,0,-205.065	0/1:151:79,72:79:2832:72:2569:-186.002,0,-209.661	0/1:118:51,67:51:1832:67:2391:-179.925,0,-129.639	0/0:73:73,0:73:2616:0:0:0,-21.9752,-235.688	0/1:64:30,34:30:1080:34:1203:-89.3091,0,-78.2473	0/1:155:73,82:73:2616:82:2929:-217.182,0,-189.028	0/1:69:31,38:31:1112:38:1364:-102.29,0,-79.6203	0/1:61:36,25:36:1287:25:900:-62.9582,0,-97.77	0/1:160:89,71:89:3196:71:2540:-180.68,0,-239.686	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.945	0/1:61:23,38:23:828:38:1356:-103.977,0,-56.4813	0/1:276:138,138:138:4936:138:4909:-358.879,0,-361.295	0/1:168:72,96:72:2588:96:3425:-257.665,0,-182.594	0/1:182:69,113:69:2476:113:4021:-307.186,0,-168.306	0/0:55:54,1:54:1932:1:36:0,-12.9584,-170.558	0/1:117:57,60:57:2048:60:2143:-157.917,0,-149.371	0/0:143:143,0:143:5123:0:0:0,-43.0473,-461.211	0/1:323:125,198:125:4500:198:7045:-535.568,0,-307.933	0/0:215:215,0:215:7697:0:0:0,-64.7214,-692.762	0/1:60:35,25:35:1251:25:892:-62.5379,0,-94.7876	0/1:294:149,145:149:5331:145:5176:-377.479,0,-391.401	0/1:288:127,161:127:4568:161:5745:-430.455,0,-324.587	0/1:135:66,69:66:2368:69:2468:-181.138,0,-172.739	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:24:11,13:11:396:13:468:-35.2349,0,-28.758	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:8:7,1:7:252:1:31:-0.690671,0,-20.6207	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	0/1:255:119,136:119:4259:136:4867:-361.42,0,-306.725	0/1:299:144,155:144:5142:155:5530:-407.496,0,-372.91	0/1:128:57,71:57:2031:71:2523:-188.707,0,-144.526	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:209:209,0:209:7504:0:0:0,-62.9153,-675.399	0/1:54:22,32:22:788:32:1135:-85.709,0,-54.9892	0/1:208:104,104:104:3713:104:3717:-271.716,0,-271.756	0/1:103:63,40:63:2251:40:1432:-98.1672,0,-171.846	0/1:84:34,50:34:1216:50:1796:-136.615,0,-84.46	0/0:120:120,0:120:4300:0:0:0,-36.1236,-387.177	0/0:173:173,0:173:6204:0:0:0,-52.0782,-558.455	0/0:273:271,2:271:9686:2:72:0,-75.3445,-864.712	0/1:160:66,93:66:2376:93:3317:-250.469,0,-165.874	0/1:337:135,202:135:4837:202:7232:-549.469,0,-334.034	0/0:181:181,0:181:6504:0:0:0,-54.4864,-585.441	0/1:30:19,11:19:671:11:396:-26.9518,0,-51.6849	0/0:222:222,0:222:7961:0:0:0,-66.8287,-716.481	0/0:109:109,0:109:3901:0:0:0,-32.8123,-351.282	0/1:40:15,24:15:536:24:841:-63.9064,0,-36.405	0/1:207:100,106:100:3581:106:3772:-277.309,0,-260.122	0/1:34:18,16:18:644:16:576:-41.9293,0,-48.0556	0/1:20:13,7:13:468:7:252:-17.0084,0,-36.439	0/1:26:20,6:20:716:6:216:-11.9637,0,-56.9409	0/1:163:65,98:65:2332:98:3487:-264.971,0,-161.072	0/1:177:75,102:75:2692:102:3639:-274.417,0,-189.24	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:281:149,131:149:5356:131:4626:-332.006,0,-397.67	0/1:274:111,163:111:3992:163:5811:-440.327,0,-276.986	0/1:169:77,92:77:2715:92:3276:-244.141,0,-193.716	0/0:106:104,2:104:3732:2:68:0,-25.4515,-329.622	0/1:195:101,94:101:3620:94:3357:-243.61,0,-267.281	0/1:174:32,142:32:1148:142:5084:-405.301,0,-51.2506	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.236	0/0:85:85,0:85:3056:0:0:0,-25.5875,-275.25	0/1:121:60,61:60:2152:61:2162:-158.388,0,-157.523	0/1:53:24,29:24:860:29:1017:-75.8861,0,-61.7672	0/0:144:144,0:144:5148:0:0:0,-43.3483,-463.46	0/1:100:30,70:30:1076:70:2504:-195.507,0,-67.0499	0/0:227:227,0:227:8119:0:0:0,-68.3338,-730.461	0/0:203:203,0:203:7276:0:0:0,-61.1091,-654.891	0/1:250:121,129:121:4321:129:4579:-336.946,0,-313.738	0/1:226:108,118:108:3876:118:4192:-309.426,0,-280.997	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:177:174,3:174:6252:3:108:0,-43.2071,-552.697	0/1:144:93,50:93:3332:50:1788:-117.793,0,-256.631	0/0:261:260,1:260:9323:1:36:0,-74.9706,-835.424	0/1:119:50,69:50:1796:69:2455:-185.381,0,-126.1	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.661	0/1:90:41,49:41:1476:49:1748:-130.512,0,-106.043	0/0:150:149,1:149:5331:1:36:0,-41.5562,-476.323	0/1:38:19,19:19:676:19:684:-50.4508,0,-49.7289	0/1:110:60,50:60:2148:50:1779:-126.652,0,-160.474	0/0:93:93,0:93:3340:0:0:0,-27.9958,-300.814	0/0:72:72,0:72:2584:0:0:0,-21.6742,-232.804	0/1:197:93,104:93:3340:104:3697:-273.63,0,-241.513	0/1:90:41,49:41:1472:49:1740:-129.792,0,-105.683	0/0:159:159,0:159:5712:0:0:0,-47.8638,-514.195	0/0:137:135,2:135:4837:2:72:0,-34.4044,-428.645
chr09	9341441	.	AGAA	CGAG	167567	PASS	AB=0.461319;ABP=112.371;AC=128;AF=0.680851;AN=188;AO=8497;CIGAR=1X2M1X;DP=13050;DPB=13051.5;DPRA=0;EPP=18454;EPPR=9809.38;GTI=0;LEN=4;MEANALT=1.37234;MQM=59.944;MQMR=59.7936;NS=94;NUMALT=1;ODDS=0.366069;PAIRED=0;PAIREDR=0;PAO=6;PQA=197;PQR=0;PRO=0;QA=300649;QR=160168;RO=4516;RPL=8497;RPP=18454;RPPR=9809.38;RPR=0;RUN=1;SAF=0;SAP=18454;SAR=8497;SRF=0;SRP=9809.38;SRR=4516;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:12,32:12:412:32:1113:-87.2291,0,-24.1613	1/1:226:0,226:0:0:226:7973:-716.826,-68.0328,0	1/1:218:0,218:0:0:218:7714:-694.288,-65.6245,0	1/1:205:0,204:0:0:204:7184:-646.385,-61.4101,0	0/1:133:72,61:72:2533:61:2136:-152.464,0,-188.185	0/1:132:83,48:83:2943:48:1698:-113.311,0,-225.306	1/1:131:0,130:0:0:130:4612:-414.88,-39.1339,0	0/1:219:102,115:102:3634:115:4013:-295.7,0,-261.573	0/1:140:59,81:59:2079:81:2845:-214.143,0,-145.222	0/1:154:74,79:74:2639:79:2773:-203.451,0,-191.384	0/1:115:66,49:66:2314:49:1753:-123.435,0,-173.902	1/1:74:0,74:0:0:74:2625:-236.499,-22.2762,0	0/1:67:37,30:37:1291:30:1070:-76.443,0,-96.3172	0/1:154:82,71:82:2919:71:2489:-177.846,0,-216.524	0/1:68:39,29:39:1387:29:1038:-73.2639,0,-104.658	0/1:59:24,35:24:863:35:1251:-95.1343,0,-60.2317	0/1:162:71,90:71:2522:90:3163:-236.079,0,-178.422	1/1:60:0,60:0:0:60:2115:-190.614,-18.0618,0	0/1:61:38,23:38:1359:23:824:-56.1208,0,-104.247	0/1:277:142,135:142:5052:135:4809:-349.195,0,-371.038	0/1:167:96,71:96:3383:71:2512:-176.059,0,-254.382	0/1:185:116,69:116:4110:69:2460:-165.965,0,-314.374	1/1:59:1,58:1:36:58:2029:-179.281,-14.1625,0	0/1:119:61,58:61:2165:58:2054:-149.309,0,-159.295	1/1:142:0,141:0:0:141:5006:-450.39,-42.4452,0	0/1:328:202,126:202:7178:126:4477:-304.364,0,-544.969	1/1:218:0,217:0:0:217:7640:-687.288,-65.3235,0	0/1:59:25,34:25:884:34:1172:-88.0165,0,-62.1172	0/1:300:146,150:146:5205:150:5307:-388.042,0,-379.101	0/1:285:162,121:162:5771:121:4296:-301.288,0,-433.905	0/1:137:71,66:71:2518:66:2331:-168.808,0,-185.155	1/1:8:0,8:0:0:8:287:-26.1765,-2.40824,0	0/1:24:13,11:13:466:11:395:-28.6674,0,-35.054	1/1:11:0,11:0:0:11:383:-34.8035,-3.31133,0	0/1:9:1,8:1:35:8:276:-22.4649,0,-0.787999	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	0/1:258:135,122:135:4819:122:4330:-312.153,0,-356.141	0/1:301:156,145:156:5487:145:5124:-370.697,0,-403.22	0/1:132:74,58:74:2621:58:2037:-143.862,0,-196.371	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:204:0,203:0:0:203:7194:-647.163,-61.1091,0	0/1:53:31,22:31:1076:22:780:-54.5682,0,-81.104	0/1:208:106,102:106:3729:102:3614:-262.854,0,-272.811	0/1:100:40,60:40:1423:60:2124:-161.325,0,-98.2534	0/1:83:50,33:50:1780:33:1171:-80.7111,0,-135.476	1/1:123:0,123:0:0:123:4366:-393.103,-37.0267,0	1/1:172:0,172:0:0:172:6085:-547.757,-51.7772,0	1/1:277:2,273:2:54:273:9651:-863.249,-77.9586,0	0/1:163:94,68:94:3351:68:2426:-169.469,0,-252.645	0/1:341:205,136:205:7300:136:4847:-333.371,0,-554.025	1/1:181:0,180:0:0:180:6388:-574.657,-54.1854,0	0/1:27:11,16:11:396:16:560:-42.5997,0,-27.8549	1/1:220:0,220:0:0:220:7830:-704.711,-66.2266,0	1/1:108:0,108:0:0:108:3845:-346.247,-32.5112,0	0/1:41:26,15:26:928:15:504:-33.3358,0,-71.4959	0/1:208:110,98:110:3906:98:3448:-247.919,0,-289.121	0/1:34:16,18:16:574:18:635:-47.2426,0,-41.7508	0/1:19:7,12:7:251:12:432:-33.5016,0,-17.2183	0/1:27:6,21:6:215:21:749:-59.6076,0,-11.5714	0/1:166:99,66:99:3506:66:2302:-157.411,0,-265.717	0/1:176:102,73:102:3643:73:2612:-182.287,0,-275.005	1/1:14:0,14:0:0:14:493:-44.7026,-4.21442,0	0/1:287:133,154:133:4695:154:5446:-403.876,0,-336.32	0/1:279:167,112:167:5914:112:3965:-273.056,0,-448.312	0/1:171:94,76:94:3321:76:2675:-189.462,0,-247.567	1/1:105:0,105:0:0:105:3718:-334.823,-31.6082,0	0/1:202:98,103:98:3477:103:3633:-266.288,0,-252.202	0/1:173:141,32:141:5007:32:1149:-51.6419,0,-398.688	1/1:56:0,55:0:0:55:1945:-174.965,-16.5567,0	1/1:88:0,87:0:0:87:3079:-276.97,-26.1896,0	0/1:122:62,60:62:2202:60:2114:-153.803,0,-161.694	0/1:53:29,24:29:1014:24:846:-60.5042,0,-75.6156	1/1:144:0,144:0:0:144:5062:-455.732,-43.3483,0	0/1:101:71,29:71:2516:29:1005:-60.3547,0,-196.284	1/1:227:0,226:0:0:226:8021:-721.125,-68.0328,0	1/1:199:0,199:0:0:199:7091:-637.894,-59.905,0	0/1:254:128,124:128:4540:124:4356:-316.048,0,-332.471	0/1:224:121,101:121:4281:101:3582:-255.419,0,-318.332	1/1:25:0,24:0:0:24:854:-76.8305,-7.22472,0	1/1:173:2,171:2:61:171:6105:-543.759,-46.285,0	0/1:145:53,92:53:1883:92:3230:-246.919,0,-125.742	1/1:262:1,261:1:36:261:9232:-827.253,-75.2716,0	0/1:120:70,50:70:2495:50:1766:-123.098,0,-188.677	1/1:96:0,96:0:0:96:3403:-306.38,-28.8989,0	0/1:92:50,42:50:1778:42:1498:-107.419,0,-132.338	1/1:151:1,149:1:36:149:5288:-472.492,-41.8811,0	0/1:38:19,19:19:670:19:669:-49.0961,0,-49.1862	0/1:112:49,62:49:1762:62:2181:-162.838,0,-125.148	1/1:93:0,93:0:0:93:3302:-297.393,-27.9958,0	1/1:72:0,72:0:0:72:2548:-229.562,-21.6742,0	0/1:199:106,93:106:3767:93:3280:-235.515,0,-279.326	0/1:90:49,41:49:1704:41:1456:-104.244,0,-126.551	1/1:156:0,156:0:0:156:5516:-496.572,-46.9607,0	1/1:137:0,137:0:0:137:4868:-438.275,-41.2411,0
chr09	11956628	.	C	T	63030.2	PASS	AB=0.485518;ABP=11.501;AC=129;AF=0.68617;AN=188;AO=5435;CIGAR=1X;DP=7842;DPB=7842;DPRA=0;EPP=11520.1;EPPR=5130.29;GTI=1;LEN=1;MEANALT=1.02128;MQM=26.2537;MQMR=39.4748;NS=94;NUMALT=1;ODDS=0.883797;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=194081;QR=86138;RO=2405;RPL=5402;RPP=11520.1;RPPR=5121.69;RPR=33;RUN=1;SAF=0;SAP=11805;SAR=5435;SRF=1;SRP=5216.72;SRR=2404;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:101:51,50:51:1832:50:1792:-73.3703,0,-120.222	1/1:70:0,70:0:0:70:2520:-148.463,-21.0721,0	1/1:174:0,174:0:0:174:6222:-365.929,-52.3792,0	1/1:147:0,147:0:0:147:5257:-357.986,-44.2514,0	0/1:77:35,42:35:1260:42:1497:-71.8109,0,-83.4448	0/1:81:37,44:37:1328:44:1580:-68.853,0,-85.1075	1/1:61:0,61:0:0:61:2166:-144.904,-18.3628,0	0/1:97:46,51:46:1648:51:1824:-79.0349,0,-105.285	0/1:226:109,117:109:3885:117:4165:-177.977,0,-250.8	0/1:35:14,21:14:504:21:756:-40.5095,0,-33.6688	0/1:28:14,14:14:496:14:504:-26.3209,0,-34.2581	1/1:63:1,62:1:36:62:2224:-128.851,-15.6187,0	0/1:41:22,19:22:788:19:676:-27.0612,0,-52.1614	0/1:36:16,20:16:576:20:716:-34.3131,0,-38.0453	0/1:39:18,21:18:644:21:756:-37.8206,0,-44.5299	0/1:37:24,13:24:851:13:468:-18.6261,0,-61.7828	0/1:31:22,9:22:792:9:320:-9.29822,0,-56.7213	1/1:35:0,35:0:0:35:1256:-73.2594,-10.5361,0	0/1:16:3,13:3:108:13:468:-20.9845,0,-3.90169	0/1:168:75,92:75:2692:92:3258:-171.152,0,-182.245	0/1:186:83,103:83:2984:103:3696:-179.896,0,-195.861	0/1:368:258,110:258:9226:110:3940:-169.338,0,-695.966	1/1:100:0,100:0:0:100:3562:-240.766,-30.103,0	0/1:55:26,29:26:932:29:1034:-46.5525,0,-62.3633	1/1:144:0,144:0:0:144:5153:-323.313,-43.3483,0	0/1:179:105,74:105:3780:74:2632:-136.001,0,-276.289	1/1:186:0,186:0:0:186:6630:-422.607,-55.9916,0	0/1:15:4,11:4:144:11:396:-20.3857,0,-8.15188	0/1:196:92,104:92:3300:104:3688:-209.702,0,-230.777	0/1:108:51,57:51:1832:57:2048:-95.5821,0,-121.876	0/1:67:43,24:43:1548:24:864:-37.533,0,-114.181	1/1:20:0,20:0:0:20:701:-43.3039,-6.0206,0	0/1:22:13,9:13:460:9:320:-14.4696,0,-31.9512	1/1:12:0,12:0:0:12:432:-25.8715,-3.61236,0	0/1:38:14,24:14:500:24:845:-38.7369,0,-30.6143	0/1:26:16,10:16:576:10:360:-13.7723,0,-39.1078	0/1:108:47,61:47:1692:61:2196:-125.003,0,-116.137	0/1:157:95,62:95:3404:62:2232:-94.6685,0,-240.092	0/1:31:14,17:14:504:17:612:-27.1444,0,-32.2818	0/1:5:4,1:4:144:1:36:-1.05356,0,-11.0905	1/1:80:0,80:0:0:80:2876:-182.551,-24.0824,0	0/1:26:15,11:15:540:11:392:-16.7441,0,-38.819	0/1:217:105,112:105:3756:112:4016:-189.509,0,-246.702	0/1:26:15,11:15:540:11:392:-19.1314,0,-38.4551	0/1:42:21,21:21:756:21:756:-38.1708,0,-53.4383	1/1:165:0,165:0:0:165:5905:-422.343,-49.67,0	1/1:117:0,117:0:0:117:4189:-244.469,-35.2205,0	1/1:166:4,162:4:140:162:5781:-378.406,-37.3997,0	0/1:111:61,50:61:2184:50:1784:-87.3214,0,-155.863	0/1:78:43,35:43:1529:35:1245:-59.587,0,-108.462	1/1:111:1,110:1:36:110:3933:-277.766,-29.8933,0	0/1:18:15,3:15:540:3:108:-2.24283,0,-41.2729	1/1:121:0,121:0:0:121:4348:-256.057,-36.4246,0	1/1:61:1,60:1:36:60:2141:-149.372,-15.0167,0	0/1:14:9,5:9:320:5:176:-6.66961,0,-22.4264	0/1:89:49,40:49:1760:40:1417:-60.8868,0,-121.801	0/1:22:14,8:14:504:8:284:-12.7725,0,-37.3694	0/1:12:5,7:5:180:7:252:-14.0408,0,-12.5843	0/1:20:11,9:11:396:9:305:-16.8993,0,-29.1162	0/1:78:26,52:26:905:52:1872:-95.4202,0,-54.0416	0/1:63:24,39:24:860:39:1392:-73.6561,0,-55.6922	1/1:15:0,15:0:0:15:535:-36.8781,-4.51545,0	0/1:154:76,78:76:2724:78:2750:-152.42,0,-193.077	0/1:175:77,97:77:2760:97:3467:-183.187,0,-185.928	0/1:83:43,40:43:1532:40:1428:-66.7435,0,-104.656	1/1:45:0,45:0:0:45:1586:-108.035,-13.5464,0	0/1:142:71,71:71:2522:71:2535:-127.572,0,-174.481	0/1:135:88,47:88:3148:47:1646:-74.159,0,-231.515	1/1:15:0,15:0:0:15:536:-34.7855,-4.51545,0	1/1:69:0,69:0:0:69:2442:-142.909,-20.7711,0	0/1:51:15,36:15:540:36:1296:-77.6838,0,-29.7106	0/1:18:6,12:6:212:12:432:-24.4061,0,-13.4208	1/1:217:1,216:1:36:216:7724:-444.751,-61.9774,0	0/1:56:28,28:28:1008:28:1008:-40.3452,0,-67.7095	1/1:114:0,114:0:0:114:4007:-251.669,-34.3174,0	1/1:108:0,108:0:0:108:3853:-258.672,-32.5112,0	0/1:142:61,81:61:2188:81:2892:-122.857,0,-137.091	1/1:49:0,49:0:0:49:1718:-102.812,-14.7505,0	1/1:18:0,18:0:0:18:648:-38.1682,-5.41854,0	1/1:83:1,82:1:36:82:2931:-184.213,-21.5619,0	0/1:81:46,35:46:1648:35:1233:-47.006,0,-111.714	1/1:268:0,268:0:0:268:9570:-644.515,-80.676,0	0/1:42:23,19:23:820:19:678:-33.6133,0,-59.1028	1/1:48:0,48:0:0:48:1724:-115.453,-14.4494,0	0/1:27:10,17:10:360:17:612:-33.3665,0,-23.4426	1/1:74:0,74:0:0:74:2645:-179.382,-22.2762,0	0/1:14:8,6:8:288:6:216:-8.84,0,-20.1212	0/1:53:20,33:20:720:33:1184:-54.2242,0,-44.2563	1/1:45:0,45:0:0:45:1603:-95.5018,-13.5464,0	1/1:29:0,29:0:0:29:1040:-66.08,-8.72987,0	0/1:63:38,25:38:1360:25:900:-37.1497,0,-97.6179	0/1:35:22,13:22:788:13:468:-21.7511,0,-58.2849	1/1:95:0,95:0:0:95:3396:-225.736,-28.5979,0	1/1:56:0,56:0:0:56:2012:-134.068,-16.8577,0
chr09	12341178	.	T	C	42790	PASS	AB=0.513906;ABP=11.3443;AC=59;AF=0.31383;AN=188;AO=2559;CIGAR=1X;DP=8617;DPB=8617;DPRA=1.10598;EPP=5559.81;EPPR=13136.1;GTI=1;LEN=1;MEANALT=1.07576;MQM=59.9945;MQMR=59.9993;NS=94;NUMALT=1;ODDS=4.13562;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90792;QR=215654;RO=6052;RPL=0;RPP=5559.81;RPPR=13144.8;RPR=2559;RUN=1;SAF=0;SAP=5559.81;SAR=2559;SRF=1;SRP=13136.1;SRR=6051;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:23,30:23:828:30:1072:-80.8379,0,-58.8895	0/0:93:93,0:93:3276:0:0:0,-27.9958,-295.059	0/0:150:150,0:150:5336:0:0:0,-45.1545,-480.375	0/0:172:171,1:171:6085:1:36:0,-48.1789,-544.156	0/1:67:36,31:36:1292:31:1094:-78.5993,0,-96.4148	0/1:50:22,28:22:792:28:1004:-75.624,0,-56.5542	0/0:87:87,0:87:3078:0:0:0,-26.1896,-277.25	0/1:168:84,84:84:2995:84:2954:-215.52,0,-219.209	0/1:180:85,95:85:3032:95:3355:-247.982,0,-218.926	0/1:52:31,21:31:1112:21:756:-52.7137,0,-84.7378	0/1:40:20,20:20:712:20:716:-52.7265,0,-52.3655	0/0:52:52,0:52:1860:0:0:0,-15.6536,-167.68	0/1:44:24,20:24:864:20:700:-50.0782,0,-64.8372	0/1:112:65,47:65:2310:47:1659:-115.881,0,-174.444	0/1:33:14,19:14:504:19:680:-51.5952,0,-35.7641	0/1:44:21,23:21:752:23:820:-60.8772,0,-54.7609	0/1:22:13,9:13:468:9:324:-22.8832,0,-35.837	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/1:18:13,5:13:456:5:176:-10.7665,0,-35.9547	0/1:199:102,97:102:3643:97:3449:-250.718,0,-268.17	0/1:136:62,72:62:2220:72:2556:-189.591,0,-159.367	0/1:140:43,97:43:1523:97:3459:-269.379,0,-95.2182	0/0:140:140,0:140:4992:0:0:0,-42.1442,-449.428	0/1:54:33,21:33:1180:21:744:-51.0287,0,-90.2524	0/0:64:63,1:63:2228:1:32:0,-16.0666,-197.586	0/1:209:109,100:109:3863:100:3524:-254.454,0,-284.948	0/0:204:204,0:204:7267:0:0:0,-61.4101,-654.084	0/1:15:13,2:13:460:2:72:-2.32127,0,-37.2199	0/1:264:139,125:139:4934:125:4449:-321.11,0,-364.739	0/1:203:109,93:109:3875:93:3312:-237.132,0,-287.779	0/1:106:54,52:54:1923:52:1841:-134.059,0,-141.437	0/0:20:20,0:20:701:0:0:0,-6.0206,-63.4117	0/1:22:8,14:8:284:14:499:-38.6231,0,-19.2807	0/0:12:12,0:12:424:0:0:0,-3.61236,-38.4964	0/1:10:4,6:4:140:6:212:-16.4145,0,-9.93428	0/1:23:7,16:7:252:16:572:-44.8897,0,-16.1053	0/1:127:60,67:60:2143:67:2387:-176.856,0,-154.906	0/1:182:86,96:86:3075:96:3404:-251.782,0,-222.191	0/1:43:20,23:20:716:23:808:-60.0958,0,-51.8234	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:138:138,0:138:4940:0:0:0,-41.5421,-444.75	0/1:22:9,13:9:320:13:464:-35.4748,0,-22.5197	0/1:209:92,117:92:3277:117:4188:-314.186,0,-232.234	0/1:37:21,15:21:748:15:536:-37.3781,0,-56.4486	0/1:40:23,16:23:820:16:576:-40.075,0,-62.0227	0/0:117:117,0:117:4169:0:0:0,-35.2205,-375.393	0/0:158:158,0:158:5660:0:0:0,-47.5627,-509.519	0/0:141:139,2:139:4945:2:72:0,-35.6085,-438.365	0/1:80:42,38:42:1504:38:1332:-96.0946,0,-111.572	0/1:136:61,75:61:2175:75:2667:-199.336,0,-155.076	0/0:121:120,1:120:4257:1:36:0,-32.8264,-379.71	0/1:28:18,10:18:636:10:356:-23.9524,0,-49.1392	0/0:155:155,0:155:5525:0:0:0,-46.6596,-497.376	0/0:77:77,0:77:2733:0:0:0,-23.1793,-246.212	0/1:26:15,11:15:540:11:396:-28.156,0,-41.1098	0/1:156:65,91:65:2293:91:3222:-243.242,0,-159.67	0/1:36:17,19:17:612:19:654:-48.343,0,-44.5764	0/1:14:8,6:8:276:6:208:-14.8447,0,-20.9608	0/1:19:5,14:5:165:14:491:-38.8015,0,-9.45403	0/1:101:44,57:44:1584:57:2032:-152.748,0,-112.447	0/1:78:48,30:48:1705:30:1059:-72.1401,0,-130.254	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:170:76,94:76:2732:94:3330:-248.742,0,-194.947	0/1:180:82,98:82:2939:98:3494:-260.486,0,-210.558	0/1:54:29,25:29:1036:25:866:-61.9958,0,-77.2983	0/0:85:85,0:85:3003:0:0:0,-25.5875,-270.498	0/1:146:59,87:59:2104:87:3061:-231.771,0,-145.679	0/1:160:55,105:55:1976:105:3748:-289.356,0,-129.95	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:47:47,0:47:1672:0:0:0,-14.1484,-150.767	0/1:35:24,11:24:860:11:396:-25.4467,0,-67.1858	0/1:25:15,10:15:536:10:356:-24.8555,0,-41.0491	0/0:104:104,0:104:3720:0:0:0,-31.3071,-335.002	0/1:63:36,27:36:1277:27:964:-68.1119,0,-96.2662	0/0:535:533,2:533:19055:2:68:0,-154.593,-1708.05	0/0:158:158,0:158:5622:0:0:0,-47.5627,-506.102	0/1:131:66,65:66:2368:65:2294:-167.286,0,-173.943	0/0:79:79,0:79:2820:0:0:0,-23.7814,-254.04	0/0:22:21,1:21:756:1:32:0,-3.42335,-65.1679	0/0:75:75,0:75:2663:0:0:0,-22.5772,-239.916	0/1:139:78,61:78:2787:61:2172:-153.904,0,-209.227	0/0:211:209,1:209:7382:1:32:0,-60.2819,-661.29	0/1:44:22,22:22:792:22:779:-57.1867,0,-58.3604	0/0:49:49,0:49:1729:0:0:0,-14.7505,-155.893	0/1:27:12,15:12:428:15:521:-39.0885,0,-30.731	0/0:96:96,0:96:3431:0:0:0,-28.8989,-309.003	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:48:28,20:28:985:20:711:-49.8662,0,-74.5121	0/0:55:55,0:55:1972:0:0:0,-16.5566,-177.755	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/1:99:47,52:47:1667:52:1852:-137.158,0,-120.515	0/1:34:6,28:6:212:28:981:-78.366,0,-9.18978	0/0:98:98,0:98:3508:0:0:0,-29.5009,-315.93	0/0:48:48,0:48:1703:0:0:0,-14.4494,-153.555
chr09	13324273	.	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chr09	13732774	.	A	G	96439.1	PASS	AB=0.544402;ABP=102.128;AC=128;AF=0.680851;AN=188;AO=7142;CIGAR=1X;DP=9794;DPB=9794;DPRA=0;EPP=15511.7;EPPR=5757.41;GTI=1;LEN=1;MEANALT=1.02128;MQM=28.9849;MQMR=59.457;NS=94;NUMALT=1;ODDS=5.37932;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=251347;QR=94282;RO=2650;RPL=0;RPP=15511.7;RPPR=5757.41;RPR=7142;RUN=1;SAF=0;SAP=15511.7;SAR=7142;SRF=0;SRP=5757.41;SRR=2650;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:40,33:40:1420:33:1115:-59.2424,0,-106.041	1/1:73:0,73:0:0:73:2587:-184.326,-21.9752,0	1/1:245:0,245:0:0:245:8600:-614.239,-73.7524,0	1/1:264:0,264:0:0:264:9242:-662.017,-79.4719,0	0/1:82:43,39:43:1532:39:1361:-73.1272,0,-113.489	0/1:50:23,27:23:824:27:968:-53.4648,0,-59.4318	1/1:72:2,70:2:72:70:2475:-169.884,-14.8374,0	0/1:194:85,109:85:3009:109:3842:-216.211,0,-212.443	0/1:95:50,45:50:1792:45:1585:-84.5614,0,-132.965	0/1:85:37,48:37:1303:48:1686:-94.8865,0,-91.983	0/1:62:8,54:8:273:54:1895:-116.627,0,-6.23632	1/1:101:1,100:1:36:100:3466:-246.221,-26.8058,0	0/1:54:19,35:19:658:35:1236:-72.1334,0,-43.2781	0/1:88:39,49:39:1392:49:1710:-96.8099,0,-99.0319	0/1:35:18,17:18:635:17:586:-32.1286,0,-46.9334	0/1:56:21,35:21:752:35:1215:-70.4253,0,-51.1484	0/1:42:10,32:10:360:32:1125:-67.9138,0,-20.101	1/1:30:0,30:0:0:30:1064:-76.0372,-9.0309,0	0/1:40:12,28:12:424:28:991:-58.8552,0,-26.4552	0/1:234:127,107:127:4540:107:3799:-199.529,0,-338.302	0/1:117:70,47:70:2472:47:1676:-84.0421,0,-186.699	0/1:142:90,52:90:3220:52:1838:-88.3736,0,-247.038	1/1:104:3,101:3:108:101:3528:-243.019,-21.232,0	0/1:54:19,35:19:680:35:1220:-71.5164,0,-45.2173	1/1:84:0,84:0:0:84:2940:-211.097,-25.2865,0	0/1:263:136,127:136:4864:127:4524:-242.097,0,-358.245	1/1:252:1,251:1:36:251:8817:-627.753,-72.2613,0	0/1:17:6,11:6:216:11:388:-22.9163,0,-14.673	0/1:264:104,159:104:3728:159:5646:-322.16,0,-255.828	0/1:168:83,85:83:2937:85:2996:-162.965,0,-213.707	0/1:94:46,48:46:1621:48:1698:-92.9915,0,-117.88	1/1:30:0,30:0:0:30:1052:-75.9997,-9.0309,0	0/1:40:18,22:18:648:22:784:-43.9222,0,-46.6107	1/1:35:0,35:0:0:35:1238:-88.4193,-10.5361,0	0/1:63:21,42:21:756:42:1480:-86.7698,0,-49.4023	0/1:51:13,38:13:468:38:1317:-79.3345,0,-27.1071	0/1:96:34,62:34:1185:62:2168:-126.914,0,-78.0536	0/1:196:99,97:99:3520:97:3462:-186.544,0,-257.963	0/1:45:18,27:18:635:27:931:-53.1894,0,-43.9306	0/1:15:6,9:6:216:9:320:-18.5287,0,-15.2751	1/1:141:0,141:0:0:141:4954:-354.299,-42.4452,0	0/1:21:10,11:10:352:11:388:-21.7122,0,-25.6966	0/1:171:95,76:95:3378:76:2716:-141.253,0,-252.759	0/1:33:11,22:11:396:22:788:-46.1175,0,-26.0488	0/1:31:12,19:12:428:19:672:-38.9263,0,-29.5269	1/1:108:0,108:0:0:108:3789:-270.981,-32.5112,0	0/1:185:81,104:81:2889:104:3668:-206.585,0,-204.496	1/1:215:2,213:2:72:213:7566:-531.249,-57.8847,0	0/1:81:60,21:60:2121:21:748:-29.041,0,-166.769	0/1:192:88,104:88:3147:104:3651:-203.198,0,-225.265	1/1:153:0,153:0:0:153:5382:-385.297,-46.0576,0	0/1:46:18,28:18:624:28:1008:-57.526,0,-42.634	1/1:242:0,242:0:0:242:8529:-609.27,-72.8493,0	1/1:124:1,123:1:36:123:4341:-305.787,-33.7294,0	0/1:20:8,12:8:265:12:417:-24.0166,0,-18.1515	0/1:263:125,138:125:4450:138:4887:-269.017,0,-320.36	0/1:18:6,12:6:201:12:432:-25.3312,0,-12.9985	0/1:36:10,26:10:360:26:923:-55.0692,0,-21.9072	0/1:35:15,20:15:540:20:708:-40.2613,0,-38.4005	0/1:97:40,57:40:1420:57:2024:-114.708,0,-98.8414	0/1:82:32,50:32:1140:50:1730:-100.323,0,-78.1186	1/1:37:0,37:0:0:37:1306:-93.4468,-11.1381,0	0/1:107:18,89:18:644:89:3180:-193.278,0,-26.0804	0/1:246:123,123:123:4382:123:4299:-235.825,0,-319.777	0/1:97:43,54:43:1531:54:1898:-106.971,0,-108.882	1/1:129:0,129:0:0:129:4580:-325.628,-38.8329,0	0/1:140:60,80:60:2135:80:2852:-160.642,0,-150.105	0/1:271:184,87:184:6558:87:3032:-135.958,0,-508.544	1/1:93:0,92:0:0:92:3220:-231.08,-27.6948,0	1/1:72:1,71:1:32:71:2487:-176.203,-19.4254,0	0/1:38:16,22:16:576:22:747:-43.1239,0,-40.7358	0/1:35:11,24:11:396:24:860:-50.5934,0,-25.4467	1/1:169:0,169:0:0:169:5893:-422.988,-50.8741,0	0/1:92:34,58:34:1220:58:2042:-118.494,0,-81.6542	1/1:153:0,153:0:0:153:5336:-382.767,-46.0576,0	1/1:144:1,143:1:36:143:5057:-356.73,-39.8122,0	0/1:212:109,103:109:3869:103:3611:-194.435,0,-284.408	1/1:121:0,121:0:0:121:4267:-304.839,-36.4246,0	1/1:40:0,40:0:0:40:1409:-100.468,-12.0412,0	1/1:117:0,117:0:0:117:4103:-293.575,-35.2205,0	0/1:141:50,91:50:1773:91:3202:-186.262,0,-117.135	1/1:193:1,192:1:36:192:6763:-479.281,-54.5005,0	0/1:28:7,21:7:248:21:744:-44.9075,0,-14.2335	1/1:51:0,51:0:0:51:1804:-129.067,-15.3525,0	0/1:25:7,18:7:248:18:636:-38.1935,0,-15.1378	1/1:79:0,79:0:0:79:2766:-199.151,-23.7814,0	0/1:16:8,8:8:284:8:263:-15.1181,0,-21.0869	0/1:50:16,34:16:572:34:1172:-69.8867,0,-36.6493	1/1:72:0,72:0:0:72:2480:-179.545,-21.6742,0	1/1:66:0,66:0:0:66:2300:-165.706,-19.868,0	0/1:118:24,94:24:848:94:3311:-201.582,0,-41.0947	0/1:46:20,26:20:707:26:905:-51.2312,0,-50.051	1/1:120:0,120:0:0:120:4257:-303.269,-36.1236,0	1/1:77:1,76:1:36:76:2673:-187.719,-19.581,0
chr09	13732781	.	A	G	97101.9	PASS	AB=0.541631;ABP=90.3367;AC=128;AF=0.680851;AN=188;AO=7143;CIGAR=1X;DP=9815;DPB=9815;DPRA=0;EPP=15513.8;EPPR=5803.01;GTI=1;LEN=1;MEANALT=1.01064;MQM=28.9868;MQMR=59.4676;NS=94;NUMALT=1;ODDS=8.87425;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=253789;QR=95507;RO=2671;RPL=0;RPP=15513.8;RPPR=5803.01;RPR=7143;RUN=1;SAF=0;SAP=15513.8;SAR=7143;SRF=0;SRP=5803.01;SRR=2671;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:40,33:40:1424:33:1184:-61.849,0,-106.368	1/1:70:0,70:0:0:70:2508:-177.51,-21.0721,0	1/1:247:0,247:0:0:247:8794:-623.468,-74.3544,0	1/1:263:0,263:0:0:263:9351:-663.798,-79.1709,0	0/1:82:44,38:44:1580:38:1349:-71.0458,0,-117.807	0/1:50:23,27:23:800:27:957:-52.8438,0,-57.2643	1/1:74:2,72:2:72:72:2563:-175.276,-15.4395,0	0/1:194:84,110:84:2990:110:3925:-219.608,0,-210.814	0/1:99:52,47:52:1836:47:1675:-89.106,0,-135.716	0/1:87:39,48:39:1404:48:1728:-95.9632,0,-100.47	0/1:63:8,55:8:284:55:1932:-118.953,0,-6.93846	1/1:101:1,100:1:36:100:3549:-248.465,-26.8058,0	0/1:54:19,35:19:667:35:1256:-72.5728,0,-44.0427	0/1:91:41,50:41:1455:50:1779:-99.2731,0,-103.739	0/1:35:18,17:18:648:17:599:-32.5186,0,-48.0595	0/1:54:20,34:20:712:34:1204:-69.5986,0,-48.151	0/1:41:9,32:9:324:32:1139:-68.7982,0,-17.1636	1/1:30:0,30:0:0:30:1058:-75.724,-9.0309,0	0/1:38:11,27:11:396:27:968:-57.3073,0,-24.5436	0/1:234:126,108:126:4532:108:3855:-203.025,0,-337.547	0/1:122:72,50:72:2562:50:1788:-90.2417,0,-193.288	0/1:143:90,53:90:3236:53:1870:-89.9731,0,-248.245	1/1:101:3,98:3:108:98:3467:-236.632,-20.3289,0	0/1:57:22,35:22:783:35:1251:-71.61,0,-53.578	1/1:83:0,83:0:0:83:2929:-208.777,-24.9855,0	0/1:258:135,123:135:4834:123:4412:-234.559,0,-356.993	1/1:258:1,257:1:36:257:9104:-643.806,-74.0675,0	0/1:17:6,11:6:216:11:392:-23.0048,0,-14.673	0/1:263:103,160:103:3696:160:5700:-325.695,0,-253.222	0/1:172:86,86:86:3084:86:3045:-164.12,0,-225.726	0/1:92:44,48:44:1580:48:1711:-93.9819,0,-114.797	1/1:28:1,27:1:36:27:960:-65.0344,-4.89272,0	0/1:39:17,22:17:612:22:758:-42.8921,0,-43.6733	1/1:34:0,34:0:0:34:1211:-86.1811,-10.235,0	0/1:64:22,42:22:769:42:1508:-87.5652,0,-50.2627	0/1:50:13,37:13:464:37:1292:-77.6454,0,-27.046	0/1:96:35,61:35:1252:61:2173:-125.378,0,-84.0819	0/1:197:102,95:102:3663:95:3355:-180.089,0,-270.506	0/1:43:17,26:17:604:26:921:-52.0143,0,-41.7463	0/1:15:6,9:6:216:9:306:-18.0103,0,-15.2751	1/1:141:0,141:0:0:141:5037:-357.526,-42.4452,0	0/1:21:10,11:10:360:11:396:-21.8892,0,-26.4227	0/1:171:95,76:95:3397:76:2719:-141.139,0,-254.466	0/1:32:11,21:11:396:21:748:-43.7915,0,-26.3498	0/1:31:12,19:12:432:19:676:-39.0144,0,-29.8893	1/1:109:0,109:0:0:109:3886:-275.441,-32.8123,0	0/1:184:82,102:82:2948:102:3590:-201.27,0,-210.048	1/1:213:2,211:2:72:211:7434:-523.011,-57.2827,0	0/1:85:64,21:64:2266:21:721:-26.9325,0,-178.614	0/1:195:90,105:90:3227:105:3753:-206.967,0,-231.551	1/1:150:0,150:0:0:150:5348:-379.508,-45.1545,0	0/1:47:19,28:19:684:28:1008:-57.2249,0,-47.7419	1/1:242:0,242:0:0:242:8617:-610.722,-72.8493,0	1/1:127:1,126:1:36:126:4496:-315.332,-34.6325,0	0/1:20:8,12:8:288:12:423:-24.4265,0,-20.2468	0/1:264:126,138:126:4497:138:4894:-268.79,0,-324.216	0/1:18:6,12:6:216:12:432:-25.3312,0,-14.372	0/1:37:11,26:11:388:26:932:-55.0693,0,-24.1193	0/1:34:15,19:15:536:19:680:-38.1995,0,-38.3398	0/1:95:41,54:41:1468:54:1940:-108.701,0,-103.762	0/1:81:31,50:31:1116:50:1783:-102.371,0,-76.2621	1/1:37:0,37:0:0:37:1295:-92.8265,-11.1381,0	0/1:102:17,85:17:604:85:3039:-184.826,0,-23.9855	0/1:253:129,123:129:4623:123:4409:-236.284,0,-339.332	0/1:94:43,51:43:1531:51:1797:-100.239,0,-109.729	1/1:131:0,131:0:0:131:4621:-330.023,-39.4349,0	0/1:145:62,83:62:2215:83:2940:-165.757,0,-155.797	0/1:268:181,87:181:6485:87:3115:-140.021,0,-502.875	1/1:91:0,91:0:0:91:3243:-230.502,-27.3937,0	1/1:71:0,71:0:0:71:2518:-178.471,-21.3731,0	0/1:38:16,22:16:576:22:780:-44.4362,0,-40.7358	0/1:34:11,23:11:396:23:828:-48.4435,0,-25.7477	1/1:170:0,170:0:0:170:6047:-429.266,-51.1751,0	0/1:93:32,61:32:1152:61:2183:-126.546,0,-75.9382	1/1:152:0,152:0:0:152:5371:-382.023,-45.7566,0	1/1:146:0,146:0:0:146:5218:-370.341,-43.9504,0	0/1:210:109,101:109:3862:101:3593:-191.861,0,-284.436	1/1:121:0,121:0:0:121:4323:-306.533,-36.4246,0	1/1:41:0,41:0:0:41:1459:-103.59,-12.3422,0	1/1:116:0,116:0:0:116:4094:-292.006,-34.9195,0	0/1:141:51,90:51:1828:90:3176:-183.736,0,-122.085	1/1:195:1,194:1:36:194:6884:-486.03,-55.1026,0	0/1:29:8,21:8:280:21:744:-44.6065,0,-16.7812	1/1:52:0,52:0:0:52:1853:-131.513,-15.6536,0	0/1:25:7,18:7:252:18:639:-38.1562,0,-15.5016	1/1:81:0,81:0:0:81:2842:-204.037,-24.3834,0	0/1:16:8,8:8:288:8:261:-14.7951,0,-21.4509	0/1:49:15,34:15:540:34:1199:-71.4714,0,-34.1297	1/1:73:0,73:0:0:73:2571:-183.64,-21.9752,0	1/1:66:0,66:0:0:66:2343:-167.027,-19.868,0	0/1:120:23,97:23:824:97:3439:-209.224,0,-38.3597	0/1:46:21,25:21:741:25:883:-49.3519,0,-53.1623	1/1:123:0,123:0:0:123:4328:-309.499,-37.0267,0	1/1:77:1,76:1:36:76:2715:-188.846,-19.581,0
chr09	13732834	.	AA	GA	25971	PASS	AB=0.684123;ABP=1594.28;AC=63;AF=0.335106;AN=188;AO=4304;CIGAR=1X1M;DP=7790;DPB=7790;DPRA=2.08704;EPP=9349.03;EPPR=7548.88;GTI=17;LEN=1;MEANALT=1.10606;MQM=24.8785;MQMR=48.0944;NS=94;NUMALT=1;ODDS=0.511397;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=107202;QR=123880;RO=3475;RPL=0;RPP=9349.03;RPPR=7548.88;RPR=4304;RUN=1;SAF=4304;SAP=9349.03;SAR=0;SRF=3475;SRP=7548.88;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:26:2,20:2:72:20:494:-32.6947,-0.163094,0	0/0:36:36,0:36:1266:0:0:0,-10.8371,-112.611	0/0:57:57,0:57:2031:0:0:0,-17.1587,-180.432	0/0:77:76,0:76:2687:0:0:0,-22.8783,-239.223	0/1:12:6,6:6:216:6:150:-8.48575,0,-16.0415	0/1:25:4,21:4:144:21:525:-34.2677,0,-5.64113	0/0:73:71,2:71:2536:2:50:0,-17.7958,-223.073	0/1:52:10,42:10:360:42:1032:-66.0935,0,-16.4829	0/1:27:21,6:21:750:6:145:-3.51334,0,-57.396	0/1:52:24,28:24:849:28:700:-39.9978,0,-59.5311	0/1:158:36,122:36:1292:122:3060:-193.9,0,-67.6293	0/0:43:43,0:43:1537:0:0:0,-12.9443,-134.419	0/1:27:13,14:13:460:14:345:-19.3556,0,-33.1691	0/1:26:10,16:10:360:16:400:-24.0682,0,-24.6915	0/1:28:19,9:19:684:9:225:-9.60835,0,-53.2216	0/1:48:28,20:28:1006:20:485:-24.0109,0,-74.8562	0/1:31:13,18:13:455:18:443:-25.8903,0,-31.1909	0/0:21:21,0:21:754:0:0:0,-6.32163,-65.084	0/1:55:12,43:12:428:43:1069:-68.25,0,-21.8959	0/1:76:36,40:36:1292:40:994:-56.0687,0,-92.377	0/1:92:55,37:55:1962:37:925:-45.7738,0,-147.493	0/1:84:23,61:23:822:61:1524:-95.6047,0,-48.1681	0/0:21:21,0:21:739:0:0:0,-6.32163,-66.2233	0/1:33:28,5:28:998:5:123:-0.000803972,0,-77.272	0/0:20:20,0:20:716:0:0:0,-6.0206,-63.0768	0/1:93:25,68:25:884:68:1685:-105.634,0,-50.9547	0/0:66:66,0:66:2356:0:0:0,-19.868,-210.025	0/1:13:6,7:6:216:7:175:-10.1644,0,-15.7405	0/1:132:51,81:51:1811:81:2019:-120.299,0,-122.225	0/1:73:28,45:28:995:45:1117:-66.6108,0,-67.0121	0/1:45:11,34:11:383:34:857:-53.433,0,-21.065	0/0:158:157,1:157:5591:1:25:0,-45.3631,-494.962	1/1:270:16,254:16:576:254:6325:-449.418,-29.8801,0	0/0:63:63,0:63:2231:0:0:0,-18.9649,-197.172	0/1:737:118,619:118:4179:619:15382:-992.59,0,-149.681	1/1:343:17,325:17:610:325:8062:-582.312,-48.5557,0	0/1:98:58,39:58:2082:39:975:-47.982,0,-156.961	0/1:64:21,43:21:754:43:1071:-65.5735,0,-48.0981	0/1:124:23,101:23:828:101:2513:-160.982,0,-35.2319	0/1:190:34,156:34:1195:156:3898:-251.676,0,-49.0323	0/0:37:36,1:36:1286:1:25:0,-8.93845,-112.804	0/1:66:22,44:22:782:44:1095:-67.0086,0,-49.6573	0/1:26:7,19:7:252:19:471:-29.6459,0,-14.8733	0/1:23:16,7:16:574:7:175:-7.15412,0,-44.8579	0/1:25:15,10:15:540:10:245:-12.1781,0,-41.1454	0/0:42:42,0:42:1491:0:0:0,-12.6433,-134.041	0/1:60:9,51:9:324:51:1258:-81.5926,0,-11.0846	0/0:56:56,0:56:1989:0:0:0,-16.8577,-177.161	0/1:49:15,34:15:536:34:846:-52.5586,0,-30.6872	0/1:82:41,41:41:1472:41:1015:-55.9421,0,-106.353	0/0:57:57,0:57:2031:0:0:0,-17.1587,-182.42	0/1:348:61,286:61:2184:286:7126:-459.581,0,-89.0726	0/0:39:39,0:39:1382:0:0:0,-11.7402,-122.554	0/0:24:24,0:24:845:0:0:0,-7.22472,-76.2211	0/1:168:23,145:23:828:145:3598:-234.495,0,-22.8759	0/1:60:30,30:30:1067:30:741:-40.878,0,-75.8404	0/1:17:2,15:2:72:15:374:-24.7073,0,-1.69681	0/1:373:74,298:74:2643:298:7480:-475.376,0,-124.801	0/1:289:96,193:96:3433:193:4824:-294.459,0,-216.955	0/1:50:27,23:27:972:23:575:-30.7014,0,-70.4558	0/1:55:27,28:27:972:28:699:-39.0046,0,-70.6294	0/0:71:69,1:69:2458:1:25:0,-19.1376,-217.378	0/1:68:52,16:52:1866:16:395:-10.9732,0,-145.816	0/1:113:56,57:56:1999:57:1412:-77.8772,0,-144.219	0/1:43:23,20:23:824:20:501:-26.9599,0,-60.1872	0/0:14:14,0:14:502:0:0:0,-4.21442,-45.312	0/1:84:34,50:34:1220:50:1250:-73.2513,0,-83.718	0/1:94:30,64:30:1050:64:1596:-98.2635,0,-65.3512	0/0:38:38,0:38:1366:0:0:0,-11.4391,-122.375	0/0:18:18,0:18:628:0:0:0,-5.41854,-54.2291	0/1:31:22,9:22:781:9:223:-8.5234,0,-61.131	0/1:294:29,265:29:1038:265:6612:-434.271,0,-4.60103	0/0:46:46,0:46:1641:0:0:0,-13.8474,-145.846	0/1:50:33,17:33:1167:17:434:-19.8029,0,-88.2557	0/0:49:49,0:49:1752:0:0:0,-14.7505,-155.41	0/0:74:74,0:74:2640:0:0:0,-22.2762,-236.438	0/1:72:21,51:21:745:51:1282:-78.9603,0,-44.7832	0/0:76:76,0:76:2711:0:0:0,-22.8783,-240.114	0/0:98:98,0:98:3443:0:0:0,-29.5009,-304.577	0/0:26:24,2:24:864:2:50:0,-3.64743,-72.9217	0/1:30:6,24:6:216:24:596:-38.4809,0,-10.507	0/0:63:63,0:63:2243:0:0:0,-18.9649,-199.375	0/1:36:23,13:23:828:13:320:-14.6664,0,-63.0005	0/0:16:16,0:16:576:0:0:0,-4.81648,-51.0607	0/1:24:17,7:17:606:7:173:-6.6706,0,-47.4754	0/0:66:65,1:65:2327:1:23:0,-17.8679,-205.195	0/1:18:10,8:10:360:8:200:-10.639,0,-26.1163	0/1:32:19,12:19:684:12:300:-14.367,0,-51.4992	0/0:31:31,0:31:1097:0:0:0,-9.33193,-97.3672	0/0:36:36,0:36:1292:0:0:0,-10.8371,-115.665	0/1:293:142,151:142:5082:151:3770:-210.649,0,-362.759	0/1:36:8,28:8:286:28:700:-44.8142,0,-15.1363	0/0:72:72,0:72:2555:0:0:0,-21.6742,-229.438	0/0:63:63,0:63:2251:0:0:0,-18.9649,-201.176
chr09	13732843	.	GTTA	GTTG,TTTG	113871	PASS	AB=0.3115,0.683359;ABP=1623.92,1536.72;AC=124,64;AF=0.659574,0.340426;AN=188;AO=3405,4507;CIGAR=3M1X,1X2M1X;DP=7952;DPB=7952.25;DPRA=0,2.17682;EPP=7396.87,9781.15;EPPR=11.6962;GTI=10;LEN=1,4;MEANALT=2.02128,2.40909;MQM=48.1289,24.5667;MQMR=60;NS=94;NUMALT=2;ODDS=8446.99;PAIRED=0,0;PAIREDR=0;PAO=0.333333,0.333333;PQA=10.6667,10.6667;PQR=0;PRO=0;QA=121522,159376;QR=142;RO=4;RPL=0,0;RPP=7396.87,9789.84;RPPR=11.6962;RPR=3405,4507;RUN=1,1;SAF=3405,4506;SAP=7396.87,9781.15;SAR=0,1;SRF=4;SRP=11.6962;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	2/2:26:0,2,24:0:0:2,24:72,847:-50.6701,-44.8574,-44.2553,-7.22472,-1.06541,0	1/1:35:0,35,0:0:0:35,0:1241,0:-110.219,-10.5361,0,-110.219,-10.5361,-110.219	1/1:57:0,57,0:0:0:57,0:2030,0:-180.444,-17.1587,0,-180.444,-17.1587,-180.444	1/1:77:0,77,0:0:0:77,0:2752,0:-244.999,-23.1793,0,-244.999,-23.1793,-244.999	1/2:13:0,6,7:0:0:6,7:216,247:-30.0614,-12.5115,-10.7053,-17.8477,0,-15.7405	1/2:28:0,4,24:0:0:4,24:144,847:-56.9685,-45.3454,-44.1413,-11.9628,0,-4.73804	1/1:74:0,71,3:0:0:71,3:2506,108:-224.4,-21.3731,0,-219.97,-16.7389,-219.067	1/2:52:0,9,43:0:0:9,43:299,1532:-104.54,-80.6103,-77.9011,-24.2429,0,-11.2986	1/2:28:0,20,7:0:0:20,7:707,242:-69.7584,-12.9726,-6.952,-56.8585,0,-54.7513	1/2:51:0,23,28:0:0:23,28:797,997:-118.228,-53.8531,-46.9294,-64.6746,0,-56.2458	1/2:162:0,34,127:0:0:34,127:1216,4468:-334.872,-237.193,-226.958,-97.759,0,-59.5282	1/1:43:0,43,0:0:0:43,0:1540,0:-134.7,-12.9443,0,-134.7,-12.9443,-134.7	1/2:27:0,13,14:0:0:13,14:468,485:-64.2367,-26.4592,-22.5458,-38.0783,0,-33.8639	1/2:26:0,10,16:0:0:10,16:360,567:-60.0103,-30.8168,-27.8065,-29.508,0,-24.6915	1/2:27:0,18,9:0:0:18,9:648,299:-69.8117,-17.0881,-11.6695,-53.0041,0,-50.2948	1/2:47:0,28,19:0:0:28,19:1004,684:-116.857,-36.4434,-28.0145,-80.7016,0,-74.9821	1/2:31:0,12,19:0:0:12,19:432,657:-71.0893,-36.2253,-32.6129,-35.1766,0,-29.457	1/1:21:0,21,0:0:0:21,0:756,0:-65.2516,-6.32163,0,-65.2516,-6.32163,-65.2516	1/2:58:0,12,46:0:0:12,46:432,1625:-120.013,-85.1679,-81.5555,-35.1766,0,-21.3292	1/2:78:0,36,42:0:0:36,42:1281,1491:-182.148,-78.8483,-68.0112,-103.6,0,-90.957	1/2:93:0,54,38:0:0:54,38:1909,1367:-227.152,-73.065,-56.8093,-154.271,0,-142.832	1/2:85:0,20,64:0:0:20,64:705,2258:-178.686,-121.395,-115.374,-57.3325,0,-38.0665	1/1:21:0,20,0:0:0:20,0:720,0:-63.5509,-6.0206,0,-63.5509,-6.0206,-63.5509	1/2:32:0,24,5:0:0:24,5:864,163:-76.5232,-9.07045,-1.84573,-67.4057,0,-65.9006	1/1:19:0,19,0:0:0:19,0:684,0:-60.208,-5.71957,0,-60.208,-5.71957,-60.208	1/2:98:0,24,74:0:0:24,74:842,2610:-204.877,-137.246,-130.021,-67.9509,0,-45.6747	1/1:66:0,66,0:0:0:66,0:2360,0:-210.368,-19.868,0,-210.368,-19.868,-210.368	1/2:14:0,6,8:0:0:6,8:216,286:-31.882,-14.3368,-12.5306,-17.8477,0,-15.4395	1/2:136:0,50,86:0:0:50,86:1796,3051:-304.291,-159.075,-144.023,-145.529,0,-119.641	1/2:76:0,28,48:0:0:28,48:1000,1708:-170.971,-90.1617,-81.7328,-81.1215,0,-66.6721	1/2:48:0,11,37:0:0:11,37:396,1308:-102.755,-70.7285,-67.4172,-32.3573,0,-21.2192	1/1:158:0,155,1:0:0:155,1:5549,36:-492.912,-46.6597,0,-490.993,-44.7527,-490.692	2/2:282:0,15,267:0:0:15,267:540,9463:-580.553,-537.235,-532.72,-80.375,-36.7087,0	1/1:60:0,60,0:0:0:60,0:2114,0:-186.926,-18.0618,0,-186.926,-18.0618,-186.926	1/2:774:1,115,651:1:35:115,651:4116,23020:-1544.88,-1214.59,-1182.82,-327.794,0,-134.671	2/2:362:0,17,342:0:0:17,342:597,12147:-736.886,-688.885,-683.768,-102.952,-54.8301,0	1/2:98:0,59,39:0:0:59,39:2116,1370:-244.846,-74.4574,-56.6966,-170.677,0,-158.937	1/2:67:0,21,46:0:0:21,46:756,1624:-146.046,-85.1501,-78.8284,-61.2146,0,-47.3672	1/2:126:0,21,105:0:0:21,105:756,3722:-256.01,-196.509,-190.187,-59.7854,0,-28.1773	1/2:197:0,34,163:0:0:34,163:1212,5749:-403.924,-306.772,-296.537,-97.4844,0,-48.4165	1/1:37:0,36,1:0:0:36,1:1262,36:-112.839,-10.8371,0,-110.923,-8.6712,-110.622	1/2:66:0,20,45:0:0:20,45:720,1599:-141.565,-84.0745,-78.0539,-57.6032,0,-44.0569	1/2:25:0,6,19:0:0:6,19:216,683:-53.7128,-36.3634,-34.5572,-17.6774,0,-11.9578	1/2:23:0,16,7:0:0:16,7:572,251:-60.1804,-13.6735,-8.85703,-46.7867,0,-44.6795	1/2:26:0,15,11:0:0:15,11:540,382:-64.191,-20.3231,-15.8076,-44.1557,0,-40.8444	1/1:42:0,42,0:0:0:42,0:1508,0:-135.56,-12.6433,0,-135.56,-12.6433,-135.56	1/2:63:0,9,54:0:0:9,54:324,1902:-127.541,-101.443,-98.7334,-26.4371,0,-10.1815	1/1:53:0,53,0:0:0:53,0:1873,0:-167.699,-15.9546,0,-167.699,-15.9546,-167.699	1/2:51:0,15,36:0:0:15,36:540,1253:-108.522,-67.5526,-63.0371,-41.2776,0,-30.4405	1/2:81:0,41,40:0:0:41,40:1476,1422:-195.056,-76.308,-63.9657,-119.047,0,-107.006	1/1:56:0,56,0:0:0:56,0:2008,0:-180.404,-16.8577,0,-180.404,-16.8577,-180.404	1/2:353:0,57,296:0:0:57,296:2044,10396:-723.133,-558.968,-541.809,-164.501,0,-75.3962	1/1:39:0,39,0:0:0:39,0:1372,0:-121.539,-11.7402,0,-121.539,-11.7402,-121.539	1/1:24:0,24,0:0:0:24,0:845,0:-76.2072,-7.22472,0,-76.2072,-7.22472,-76.2072	1/2:182:0,23,159:0:0:23,159:828,5635:-360.316,-294.13,-287.206,-66.5253,0,-18.6615	1/2:62:0,31,31:0:0:31,31:1093,1095:-145.15,-58.3288,-48.9969,-87.1145,0,-77.7826	1/2:17:0,2,15:0:0:2,15:72,530:-34.6974,-28.8305,-28.2284,-6.21226,0,-1.69681	1/2:385:0,73,311:0:0:73,311:2609,10994:-793.416,-581.804,-559.829,-211.776,0,-118.156	1/2:292:0,92,198:0:0:92,198:3300,7056:-638.403,-373.993,-346.299,-264.502,0,-204.898	1/2:50:0,27,23:0:0:27,23:972,827:-121.466,-44.3806,-36.2527,-77.3795,0,-70.4558	1/2:56:0,27,29:0:0:27,29:972,1033:-133.262,-54.5056,-46.3778,-79.0583,0,-70.3284	1/1:71:0,70,1:0:0:70,1:2465,35:-220.256,-21.0721,0,-218.346,-18.9144,-218.045	1/2:66:0,50,16:0:0:50,16:1781,565:-173.763,-30.4233,-15.3718,-143.609,0,-138.792	1/2:114:0,56,58:0:0:56,58:2012,2051:-271.071,-108.923,-92.0658,-162.447,0,-144.987	1/2:42:0,21,21:0:0:21,21:741,730:-99.5933,-39.6567,-33.335,-60.2328,0,-53.9112	1/1:13:0,13,0:0:0:13,0:464,0:-41.9053,-3.91339,0,-41.9053,-3.91339,-41.9053	1/2:86:0,34,51:0:0:34,51:1212,1794:-190.275,-94.3021,-84.0671,-96.0284,0,-80.6758	1/2:105:0,29,76:0:0:29,76:1040,2652:-221.075,-137.275,-128.545,-84.1218,0,-61.2435	1/1:38:0,38,0:0:0:38,0:1364,0:-122.195,-11.4391,0,-122.195,-11.4391,-122.195	1/1:18:0,18,0:0:0:18,0:648,0:-55.352,-5.41854,0,-55.352,-5.41854,-55.352	1/2:32:0,22,10:0:0:22,10:783,359:-82.8386,-19.2626,-12.6399,-63.855,0,-60.8447	2/2:304:0,26,276:0:0:26,276:902,9756:-601.394,-528.73,-520.903,-83.0843,-10.3021,0	1/1:44:0,44,0:0:0:44,0:1584,0:-140.735,-13.2453,0,-140.735,-13.2453,-140.735	1/2:51:0,33,18:0:0:33,18:1159,637:-127.777,-35.4234,-25.4894,-92.6373,0,-87.2187	1/1:48:0,48,0:0:0:48,0:1720,0:-153.899,-14.4494,0,-153.899,-14.4494,-153.899	1/1:74:0,73,0:0:0:73,0:2605,0:-233.122,-21.9752,0,-233.122,-21.9752,-233.122	1/2:74:0,20,53:0:0:20,53:716,1887:-156.38,-98.6934,-92.6728,-57.7478,0,-41.7932	1/1:75:0,75,0:0:0:75,0:2677,0:-237.09,-22.5773,0,-237.09,-22.5773,-237.09	1/1:95:0,95,0:0:0:95,0:3404,0:-300.767,-28.5979,0,-300.767,-28.5979,-300.767	1/1:25:0,23,2:0:0:23,2:824,72:-73.2822,-6.92369,0,-69.4524,-2.83863,-68.8503	1/2:30:0,6,24:0:0:6,24:216,855:-63.6056,-46.2073,-44.4011,-17.7317,0,-10.507	1/1:64:3,60,0:3:107:60,0:2145,0:-180.735,-9.32592,0,-181.638,-18.0618,-190.361	1/2:37:0,22,15:0:0:22,15:792,536:-91.7417,-27.4211,-20.7985,-64.6053,0,-60.0899	1/1:15:0,15,0:0:0:15,0:540,0:-47.8443,-4.51545,0,-47.8443,-4.51545,-47.8443	1/2:24:0,17,7:0:0:17,7:612,252:-63.3459,-13.5091,-8.39155,-50.1143,0,-48.0071	1/1:64:0,63,1:0:0:63,1:2260,29:-200.888,-18.9649,0,-199.208,-17.0628,-198.907	1/2:18:0,10,8:0:0:10,8:360,286:-43.8171,-15.5835,-12.5732,-28.5245,0,-26.1163	1/2:33:0,20,13:0:0:20,13:716,466:-82.1974,-25.1813,-19.1607,-57.3034,0,-53.39	1/1:30:0,30,0:0:0:30,0:1080,0:-96.0495,-9.0309,0,-96.0495,-9.0309,-96.0495	1/1:36:0,36,0:0:0:36,0:1284,0:-115.006,-10.8371,0,-115.006,-10.8371,-115.006	1/2:299:0,142,152:0:0:142,152:5038,5354:-692.603,-287.395,-244.649,-405.288,0,-359.531	1/2:37:0,8,28:0:0:8,28:288,988:-76.1878,-52.7937,-50.3855,-23.478,0,-15.0492	1/1:71:0,71,0:0:0:71,0:2536,0:-227.664,-21.3731,0,-227.664,-21.3731,-227.664	1/1:63:0,63,0:0:0:63,0:2259,0:-202,-18.9649,0,-202,-18.9649,-202
chr09	13739561	.	C	T	54753.6	PASS	AB=0.427727;ABP=386.882;AC=93;AF=0.494681;AN=188;AO=3620;CIGAR=1X;DP=8472;DPB=8472;DPRA=0;EPP=7863.74;EPPR=10521.6;GTI=1;LEN=1;MEANALT=1.03191;MQM=52.8702;MQMR=59.4517;NS=94;NUMALT=1;ODDS=94.3395;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=127219;QR=172763;RO=4848;RPL=0;RPP=7863.74;RPPR=10521.6;RPR=3620;RUN=1;SAF=0;SAP=7863.74;SAR=3620;SRF=0;SRP=10530.3;SRR=4848;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:44:32,12:32:1125:12:432:-24.9412,0,-88.2845	0/1:97:45,52:45:1593:52:1808:-133.195,0,-114.449	0/1:132:48,84:48:1713:84:2962:-225.371,0,-114.632	0/1:165:62,103:62:2224:103:3608:-274.336,0,-150.751	0/1:50:30,20:30:1076:20:699:-48.1009,0,-82.0737	0/1:39:24,15:24:860:15:536:-36.6181,0,-65.9644	0/1:101:42,59:42:1504:59:2050:-153.786,0,-104.383	0/1:127:101,26:101:3605:26:924:-44.1643,0,-286.183	0/1:75:43,32:43:1521:32:1110:-76.2947,0,-114.587	0/1:76:55,21:55:1968:21:744:-44.1086,0,-154.356	0/1:82:54,28:54:1920:28:989:-63.7792,0,-148.354	0/1:111:53,58:53:1888:58:2056:-151.34,0,-136.769	0/1:107:89,18:89:3173:18:629:-24.4124,0,-253.532	0/1:63:45,18:45:1616:18:640:-38.7612,0,-126.764	0/1:52:44,8:44:1561:8:288:-10.5101,0,-125.118	0/1:73:54,19:54:1923:19:676:-38.8595,0,-151.346	0/1:60:52,8:52:1852:8:288:-8.13957,0,-148.653	0/1:18:7,11:7:248:11:366:-27.7654,0,-17.2423	0/1:40:33,7:33:1188:7:240:-9.09223,0,-95.1792	0/1:104:68,35:68:2427:35:1221:-78.7381,0,-187.472	0/1:110:71,37:71:2539:37:1313:-85.3052,0,-195.8	0/1:110:80,30:80:2837:30:1065:-62.5791,0,-222.352	0/1:114:37,77:37:1320:77:2646:-203.343,0,-84.783	0/1:86:41,45:41:1468:45:1597:-117.057,0,-106.528	0/1:73:13,60:13:453:60:2114:-168.162,0,-19.1244	0/1:222:152,70:152:5402:70:2403:-148.52,0,-419.275	0/1:184:71,113:71:2548:113:4011:-304.744,0,-174.162	0/1:42:34,8:34:1216:8:288:-13.2168,0,-97.0987	0/1:196:132,64:132:4713:64:2251:-142.337,0,-365.073	0/1:196:140,56:140:4985:56:1900:-109.639,0,-389.656	0/1:131:78,53:78:2749:53:1881:-129.623,0,-207.572	0/1:9:4,5:4:144:5:150:-11.0616,0,-10.6043	0/1:32:18,14:18:636:14:485:-33.1412,0,-47.9332	0/1:11:8,3:8:288:3:108:-6.55032,0,-22.9561	0/1:8:2,6:2:72:6:212:-16.9453,0,-4.42848	0/1:15:11,4:11:396:4:144:-8.70159,0,-31.4673	0/1:187:148,39:148:5291:39:1381:-67.8231,0,-419.922	0/1:157:93,64:93:3323:64:2223:-151.75,0,-251.883	0/1:32:21,11:21:756:11:369:-23.6486,0,-58.6801	0/1:6:1,5:1:36:5:180:-14.7224,0,-1.79209	0/1:198:94,104:94:3304:104:3547:-258.712,0,-237.945	0/1:58:52,6:52:1855:6:193:-0.076081,0,-149.765	0/1:133:86,46:86:3057:46:1610:-104.776,0,-235.376	0/1:56:40,16:40:1432:16:572:-34.9195,0,-112.315	0/1:52:37,15:37:1300:15:532:-32.4068,0,-101.635	0/1:70:17,53:17:612:53:1866:-146.202,0,-34.3404	0/1:123:63,60:63:2260:60:2118:-153.218,0,-166.547	0/1:146:56,90:56:2004:90:3130:-236.874,0,-136.669	0/1:59:38,21:38:1345:21:741:-49.1095,0,-103.392	0/1:97:60,37:60:2143:37:1294:-87.3938,0,-163.932	0/1:125:44,81:44:1541:81:2873:-219.09,0,-101.347	0/1:10:3,7:3:93:7:252:-20.0021,0,-5.66643	0/1:205:90,115:90:3236:115:4027:-299.555,0,-229.559	0/1:56:20,36:20:720:36:1253:-94.4792,0,-48.2611	0/0:11:10,1:10:360:1:32:0,-0.115648,-29.5033	0/1:124:63,61:63:2268:61:2169:-157.633,0,-167.054	0/1:43:29,14:29:1035:14:474:-30.0077,0,-80.5141	0/1:4:1,3:1:36:3:93:-7.45545,0,-2.39415	0/1:4:3,1:3:108:1:36:-2.38511,0,-8.87105	0/1:123:86,37:86:3026:37:1324:-81.8914,0,-235.41	0/1:178:116,62:116:4145:62:2191:-143.467,0,-319.536	0/1:5:3,2:3:108:2:72:-5.32664,0,-8.57002	0/1:161:123,38:123:4399:38:1354:-72.1134,0,-347.582	0/1:101:65,36:65:2317:36:1277:-84.5194,0,-178.279	0/1:50:35,15:35:1237:15:540:-33.6245,0,-96.5661	0/1:69:26,43:26:932:43:1525:-115.696,0,-63.4269	0/1:111:56,55:56:2008:55:1898:-137.548,0,-147.567	0/1:197:156,41:156:5565:41:1442:-70.342,0,-441.628	0/1:47:27,20:27:972:20:720:-50.888,0,-73.6394	0/1:85:43,42:43:1516:42:1504:-109.308,0,-110.11	0/1:70:46,24:46:1648:24:844:-54.9518,0,-127.509	0/1:23:17,6:17:581:6:216:-12.8525,0,-45.6835	0/1:153:50,103:50:1781:103:3656:-280.047,0,-114.496	0/1:46:28,18:28:991:18:633:-43.306,0,-75.6467	0/1:163:53,110:53:1900:110:3894:-300.165,0,-122.204	0/1:174:53,121:53:1893:121:4299:-333.927,0,-118.26	0/1:134:72,62:72:2559:62:2164:-152.946,0,-190.194	0/1:127:69,58:69:2459:58:2064:-146.15,0,-183.09	0/1:17:7,10:7:252:10:360:-27.5445,0,-17.8577	0/1:112:39,73:39:1396:73:2536:-193.89,0,-91.4457	0/1:70:47,23:47:1688:23:813:-52.1386,0,-130.932	0/1:128:56,72:56:1993:72:2580:-193.16,0,-141.087	0/1:101:80,21:80:2854:21:748:-37.0289,0,-226.69	0/1:59:36,23:36:1275:23:824:-55.827,0,-97.2868	0/1:31:20,11:20:712:11:388:-25.7249,0,-55.0724	0/1:153:91,62:91:3219:62:2208:-152.615,0,-243.792	0/1:17:11,6:11:392:6:212:-14.2625,0,-30.5025	0/1:109:86,23:86:3076:23:813:-40.5083,0,-244.201	0/1:82:41,41:41:1467:41:1436:-103.986,0,-107.426	0/1:61:41,20:41:1443:20:692:-44.0292,0,-111.781	0/1:100:71,29:71:2528:29:1024:-62.039,0,-197.648	0/1:51:39,12:39:1396:12:411:-21.9434,0,-110.496	0/1:154:65,89:65:2317:89:3122:-234.165,0,-162.327	0/1:99:52,47:52:1852:47:1636:-117.477,0,-137.079
chr09	14775176	.	A	G	69325.1	PASS	AB=0.481172;ABP=11.8416;AC=127;AF=0.675532;AN=188;AO=2819;CIGAR=1X;DP=4314;DPB=4314;DPRA=0;EPP=857.125;EPPR=723.369;GTI=0;LEN=1;MEANALT=1.01064;MQM=60;MQMR=60;NS=94;NUMALT=1;ODDS=3.58925;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98929;QR=53156;RO=1494;RPL=0;RPP=6124.39;RPPR=3247.19;RPR=2819;RUN=1;SAF=1936;SAP=857.125;SAR=883;SRF=1099;SRP=723.369;SRR=395;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:19:11,8:11:392:8:288:-20.5478,0,-29.9005	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	1/1:48:1,47:1:36:47:1645:-144.738,-10.8512,0	1/1:22:0,22:0:0:22:742:-67.0907,-6.62266,0	0/1:8:6,2:6:207:2:68:-4.04947,0,-16.5587	0/1:12:8,4:8:288:4:140:-9.33222,0,-22.655	1/1:26:0,26:0:0:26:903:-81.5838,-7.82678,0	0/1:25:9,16:9:320:16:568:-43.9261,0,-21.6166	0/1:36:22,14:22:776:14:500:-34.4991,0,-59.3251	0/1:5:1,4:1:32:4:144:-11.8085,0,-1.69416	0/1:193:97,96:97:3473:96:3416:-249.557,0,-254.681	1/1:47:0,47:0:0:47:1648:-148.608,-14.1484,0	0/1:54:26,28:26:928:28:996:-73.6993,0,-67.5826	0/1:45:21,24:21:743:24:838:-62.1912,0,-53.647	0/1:32:18,14:18:640:14:492:-34.9794,0,-48.2964	0/1:37:19,18:19:669:18:648:-47.5138,0,-49.3958	0/1:32:16,16:16:568:16:572:-42.1805,0,-41.8189	1/1:23:0,23:0:0:23:804:-72.6793,-6.92369,0	0/1:95:52,43:52:1864:43:1503:-106.965,0,-139.442	0/1:24:14,10:14:491:10:323:-22.1578,0,-37.2964	0/1:18:9,9:9:320:9:324:-24.0873,0,-23.7238	0/1:13:11,2:11:396:2:72:-2.92333,0,-32.0694	1/1:28:0,28:0:0:28:957:-86.4379,-8.42884,0	0/1:21:10,11:10:341:11:376:-27.8477,0,-24.6961	1/1:20:0,20:0:0:20:695:-62.8714,-6.0206,0	0/1:48:20,28:20:708:28:979:-73.9726,0,-49.5962	1/1:34:0,34:0:0:34:1173:-105.872,-10.235,0	0/1:25:14,11:14:496:11:392:-28.0943,0,-37.4485	0/1:44:32,12:32:1123:12:412:-24.1639,0,-88.1318	0/1:15:10,5:10:360:5:176:-11.6696,0,-28.2289	0/1:25:13,12:13:468:12:387:-27.615,0,-34.9339	1/1:60:0,60:0:0:60:2160:-194.667,-18.0618,0	0/1:36:23,13:23:828:13:460:-30.8983,0,-64.007	1/1:127:0,127:0:0:127:4525:-407.418,-38.2308,0	0/1:143:84,59:84:3000:59:2089:-145.231,0,-227.185	0/1:137:79,58:79:2813:58:2042:-142.808,0,-212.167	0/1:99:50,49:50:1784:49:1697:-123.212,0,-131.041	0/1:14:7,7:7:248:7:252:-18.8145,0,-18.4498	0/1:104:54,50:54:1914:50:1761:-127.464,0,-141.226	0/1:77:42,35:42:1512:35:1222:-87.1002,0,-113.195	1/1:34:0,33:0:0:33:1151:-103.536,-9.93399,0	0/1:46:23,23:23:824:23:820:-60.2751,0,-60.6359	0/1:51:28,23:28:968:23:779:-55.0683,0,-72.0762	0/1:53:20,33:20:712:33:1144:-87.3077,0,-48.4521	0/1:24:17,7:17:574:7:239:-14.618,0,-44.7513	1/1:21:1,20:1:36:20:693:-59.0913,-2.72336,0	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	1/1:22:0,22:0:0:22:767:-69.3494,-6.62266,0	0/1:18:7,11:7:252:11:380:-29.1134,0,-17.6104	0/1:11:3,8:3:104:8:261:-20.4967,0,-6.39148	1/1:22:0,22:0:0:22:756:-68.3564,-6.62266,0	0/1:83:44,39:44:1569:39:1391:-100.503,0,-116.514	1/1:26:0,26:0:0:26:920:-83.1171,-7.82678,0	1/1:19:0,19:0:0:19:667:-60.3546,-5.71957,0	0/1:24:6,18:6:216:18:648:-51.4272,0,-12.5658	0/1:22:9,13:9:324:13:429:-32.3042,0,-22.8832	0/1:16:11,5:11:384:5:153:-9.25599,0,-30.0782	0/1:107:66,41:66:2357:41:1472:-100.566,0,-180.177	0/1:55:32,23:32:1144:23:805:-56.2109,0,-86.7129	0/1:29:12,17:12:428:17:584:-44.1523,0,-30.1289	0/1:74:31,43:31:1104:43:1494:-112.473,0,-77.3944	1/1:36:0,36:0:0:36:1288:-116.224,-10.8371,0	0/1:23:18,5:18:624:5:165:-8.24991,0,-49.5577	0/1:32:16,16:16:567:16:564:-41.4573,0,-41.7278	0/1:18:8,10:8:288:10:347:-26.1451,0,-20.8489	1/1:21:0,21:0:0:21:686:-62.0461,-6.32163,0	0/1:37:17,20:17:584:20:708:-52.9075,0,-41.7427	0/1:19:13,6:13:468:6:216:-14.0709,0,-36.7401	1/1:175:0,175:0:0:175:6199:-558.01,-52.6803,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:34:12,22:12:415:22:776:-59.9271,0,-27.4453	0/1:23:15,8:15:540:8:288:-19.3437,0,-42.0128	1/1:16:0,16:0:0:16:560:-50.7287,-4.81648,0	0/1:7:4,3:4:140:3:104:-7.5956,0,-10.8374	1/1:49:0,49:0:0:49:1698:-153.102,-14.7505,0	1/1:18:1,17:1:36:17:590:-49.8259,-1.82027,0	0/1:31:13,18:13:464:18:640:-48.5974,0,-32.7656	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:48:19,29:19:684:29:1028:-78.3836,0,-47.4409	1/1:28:1,27:1:36:27:920:-79.5098,-4.83057,0	0/1:36:16,20:16:572:20:689:-51.4909,0,-40.9763	1/1:47:0,47:0:0:47:1605:-144.734,-14.1484,0	0/1:40:13,27:13:468:27:952:-73.954,0,-30.4184	1/1:43:0,43:0:0:43:1520:-137.093,-12.9443,0	0/1:41:17,24:17:585:24:822:-61.9518,0,-40.6297	1/1:70:1,69:1:36:69:2376:-210.5,-17.4738,0	0/1:16:5,11:5:180:11:392:-30.8036,0,-11.7356	0/1:31:11,20:11:396:20:700:-53.9915,0,-26.6508	1/1:45:0,45:0:0:45:1581:-142.578,-13.5464,0	1/1:176:1,175:1:36:175:6217:-556.03,-49.383,0	0/1:330:174,156:174:6231:156:5526:-398.127,0,-461.545	0/1:37:21,16:21:748:16:559:-39.4995,0,-56.5072	1/1:25:0,25:0:0:25:860:-77.7116,-7.52575,0	1/1:88:0,88:0:0:88:3091:-278.422,-26.4906,0
chr09	16200925	.	A	T	139254	PASS	AB=0.468571;ABP=61.5656;AC=126;AF=0.670213;AN=188;AO=6959;CIGAR=1X;DP=10603;DPB=10603;DPRA=0;EPP=15105.6;EPPR=7878.94;GTI=0;LEN=1;MEANALT=1.09574;MQM=59.9174;MQMR=59.9397;NS=94;NUMALT=1;ODDS=0.957878;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=248502;QR=129781;RO=3631;RPL=1;RPP=15105.6;RPPR=7878.94;RPR=6958;RUN=1;SAF=0;SAP=15114.3;SAR=6959;SRF=0;SRP=7887.63;SRR=3631;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:19,13:19:680:13:464:-32.4645,0,-51.8962	1/1:145:0,145:0:0:145:5187:-466.967,-43.6494,0	1/1:119:0,119:0:0:119:4219:-379.892,-35.8226,0	1/1:274:0,274:0:0:274:9738:-876.344,-82.4822,0	0/1:62:30,32:30:1072:32:1139:-84.1545,0,-78.1286	0/1:66:47,19:47:1680:19:677:-41.1606,0,-130.841	1/1:193:0,193:0:0:193:6914:-622.288,-58.0988,0	0/1:189:126,63:126:4486:63:2256:-145.304,0,-347.013	0/1:81:32,47:32:1143:47:1675:-126.895,0,-79.0377	0/1:125:77,48:77:2755:48:1698:-115.477,0,-210.563	0/1:111:62,49:62:2223:49:1760:-124.332,0,-166.919	1/1:104:0,104:0:0:104:3702:-333.382,-31.3071,0	0/1:75:39,36:39:1388:36:1291:-93.9164,0,-102.642	0/1:99:53,46:53:1874:46:1636:-117.727,0,-139.133	0/1:72:41,31:41:1455:31:1112:-78.7172,0,-109.343	0/1:65:33,32:33:1179:32:1142:-83.5225,0,-86.8503	0/1:78:39,39:39:1395:39:1365:-99.6661,0,-102.368	0/1:64:34,29:34:1216:29:1040:-74.5897,0,-90.4219	1/1:72:0,72:0:0:72:2576:-232.09,-21.6742,0	0/1:299:156,140:156:5577:140:4996:-360.321,0,-412.588	0/1:111:55,56:55:1976:56:1987:-145.602,0,-144.7	0/1:160:103,57:103:3646:57:2052:-136.787,0,-280.178	1/1:47:0,47:0:0:47:1688:-152.207,-14.1484,0	0/1:82:42,40:42:1504:40:1432:-104.493,0,-110.97	1/1:91:0,91:0:0:91:3256:-293.261,-27.3937,0	0/1:459:232,227:232:8315:227:8097:-590.541,0,-610.183	0/1:189:104,85:104:3728:85:3040:-216.933,0,-278.826	0/1:33:20,13:20:712:13:468:-32.5257,0,-54.4727	0/1:316:169,147:169:6052:147:5236:-376.252,0,-449.028	0/1:152:80,72:80:2872:72:2565:-185.342,0,-212.96	0/1:140:82,58:82:2928:58:2076:-144.966,0,-221.608	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:33:21,12:21:752:12:421:-28.288,0,-58.0723	1/1:4:0,4:0:0:4:144:-13.3132,-1.20412,0	0/1:9:1,8:1:36:8:288:-23.5581,0,-0.889005	0/1:19:8,11:8:288:11:388:-29.5378,0,-20.5478	0/1:198:95,103:95:3395:103:3696:-273.203,0,-246.16	0/1:193:105,88:105:3761:88:3164:-226.879,0,-280.58	0/1:106:48,56:48:1724:56:1986:-147.346,0,-123.778	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	1/1:168:4,164:4:144:164:5872:-515.273,-37.2594,0	0/1:59:23,36:23:819:36:1279:-97.64,0,-56.2708	0/1:104:58,46:58:2084:46:1648:-117.301,0,-156.523	0/1:75:41,34:41:1468:34:1205:-86.1751,0,-109.839	0/1:78:31,47:31:1112:47:1672:-127.287,0,-76.911	1/1:80:0,80:0:0:80:2851:-256.828,-24.0824,0	0/1:136:66,70:66:2359:70:2508:-185.032,0,-171.628	1/1:229:4,225:4:135:225:8036:-710.648,-56.4534,0	0/1:129:62,67:62:2210:67:2404:-177.784,0,-160.331	0/1:104:66,37:66:2348:37:1320:-87.7361,0,-180.211	1/1:198:0,198:0:0:198:7081:-637.347,-59.6039,0	0/1:22:5,17:5:180:17:612:-48.7908,0,-9.9294	1/1:143:2,141:2:72:141:5034:-446.37,-36.2106,0	1/1:57:0,57:0:0:57:2027:-182.702,-17.1587,0	0/1:32:13,19:13:468:19:675:-51.4446,0,-32.8267	0/1:134:60,74:60:2102:74:2637:-197.228,0,-148.404	0/1:29:14,15:14:504:15:536:-39.8449,0,-36.9682	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:34:23,11:23:828:11:396:-25.7468,0,-64.6091	0/1:106:58,48:58:2084:48:1690:-120.473,0,-154.816	0/1:147:94,53:94:3355:53:1891:-126.216,0,-257.915	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	0/1:226:111,115:111:3973:115:4116:-302.564,0,-289.726	0/1:227:115,111:115:4119:111:3973:-289.366,0,-302.501	0/1:115:52,63:52:1864:63:2246:-167.783,0,-133.421	1/1:93:0,93:0:0:93:3332:-300.097,-27.9958,0	0/1:175:70,105:70:2497:105:3756:-285.56,0,-172.301	0/1:167:121,46:121:4335:46:1656:-99.0564,0,-340.052	1/1:59:2,57:2:72:57:2048:-177.755,-10.924,0	1/1:108:0,108:0:0:108:3861:-347.666,-32.5112,0	0/1:86:57,29:57:2013:29:1044:-68.3862,0,-155.545	0/1:51:24,27:24:860:27:970:-72.2652,0,-62.3693	1/1:150:0,150:0:0:150:5352:-481.528,-45.1545,0	0/1:66:37,29:37:1320:29:1031:-73.1884,0,-99.234	1/1:146:0,146:0:0:146:5200:-468.141,-43.9504,0	1/1:187:1,186:1:36:186:6639:-593.978,-52.6943,0	0/1:159:63,96:63:2260:96:3409:-259.16,0,-155.799	1/1:151:0,151:0:0:151:5396:-485.772,-45.4555,0	0/1:13:9,4:9:324:4:144:-9.40023,0,-25.5925	1/1:157:1,156:1:36:156:5608:-501.236,-43.6634,0	0/1:113:64,49:64:2300:49:1756:-124.308,0,-173.244	1/1:209:0,208:0:0:208:7429:-668.101,-62.6142,0	0/1:127:71,55:71:2548:55:1954:-137.845,0,-191.281	1/1:90:0,90:0:0:90:3215:-289.571,-27.0927,0	0/1:48:14,34:14:495:34:1220:-95.6574,0,-30.4336	1/1:169:2,167:2:72:167:5957:-529.398,-44.0373,0	0/1:49:17,32:17:612:32:1144:-88.519,0,-40.6621	0/1:97:52,45:52:1868:45:1612:-116.17,0,-139.199	1/1:93:0,93:0:0:93:3314:-298.478,-27.9958,0	0/1:76:38,38:38:1355:38:1355:-99.3714,0,-99.1005	0/1:146:79,67:79:2802:67:2383:-170.777,0,-208.47	0/1:72:52,19:52:1864:19:672:-39.0742,0,-146.306	1/1:113:0,113:0:0:113:4049:-364.596,-34.0164,0	1/1:104:0,104:0:0:104:3716:-334.642,-31.3071,0
chr09	16240792	.	ATACT	GTACT,GTACA	174488	PASS	AB=0.517805,0.475654;ABP=18.1664,31.3468;AC=126,62;AF=0.670213,0.329787;AN=188;AO=5763,2624;CIGAR=1X4M,1X3M1X;DP=8438;DPB=8438.8;DPRA=0,1.05073;EPP=12517.2,5700.95;EPPR=13.8677;GTI=0;LEN=1,5;MEANALT=2.11702,2.4697;MQM=59.9767,59.702;MQMR=60;NS=94;NUMALT=2;ODDS=1.06265;PAIRED=0,0;PAIREDR=0;PAO=0.5,3.5;PQA=18,126;PQR=0;PRO=0;QA=205169,92371;QR=180;RO=5;RPL=0,0;RPP=12517.2,5700.95;RPPR=13.8677;RPR=5763,2624;RUN=1,1;SAF=0,0;SAP=12517.2,5700.95;SAR=5763,2624;SRF=0;SRP=13.8677;SRR=5;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:26:0,8,18:0:0:8,18:288,647:-76.6379,-53.1384,-50.7302,-23.8592,0,-18.4406	1/1:205:0,202,2:0:0:202,2:7218,72:-649.3,-60.8081,0,-643.425,-54.9332,-642.823	1/1:113:0,113,0:0:0:113,0:4014,0:-361.446,-34.0164,0,-361.446,-34.0164,-361.446	1/1:169:0,169,0:0:0:169,0:6029,0:-542.716,-50.8741,0,-542.716,-50.8741,-542.716	1/2:30:0,17,13:0:0:17,13:608,459:-87.311,-37.7314,-32.6139,-49.9345,0,-46.0211	1/2:46:0,23,23:0:0:23,23:828,811:-133.951,-66.3866,-59.4629,-67.9204,0,-60.9967	1/1:122:0,122,0:0:0:122,0:4366,0:-393.111,-36.7257,0,-393.111,-36.7257,-393.111	1/2:155:0,69,83:0:0:69,83:2476,2942:-441.62,-239.654,-218.883,-201.963,0,-176.977	1/2:103:0,65,38:0:0:65,38:2328,1345:-299.757,-109.911,-90.3443,-190.201,0,-178.762	1/2:94:0,57,36:0:0:57,36:2040,1237:-266.851,-100.486,-83.3271,-166.412,0,-155.575	1/2:163:0,75,86:0:0:75,86:2666,3022:-463.192,-245.936,-223.359,-217.354,0,-191.466	1/1:67:0,67,0:0:0:67,0:2368,0:-213.378,-20.169,0,-213.378,-20.169,-213.378	1/2:54:0,29,25:0:0:29,25:1040,869:-155.825,-70.9927,-62.2628,-85.1845,0,-77.6587	1/2:124:2,61,59:2:72:61,59:2165,2079:-339.144,-163.347,-150.859,-170.518,0,-158.632	1/2:46:0,29,17:0:0:29,17:1044,592:-133.68,-48.488,-39.7581,-85.5449,0,-80.4274	1/2:80:0,43,37:0:0:43,37:1520,1326:-231.841,-108.051,-95.1069,-123.785,0,-112.647	1/2:131:1,55,75:1:36:55,75:1968,2606:-369.087,-208.903,-195.284,-157.541,0,-137.901	1/2:67:0,30,36:0:0:30,36:1071,1276:-191.221,-103.906,-94.8748,-87.311,0,-76.4739	1/1:48:0,48,0:0:0:48,0:1704,0:-153.646,-14.4494,0,-153.646,-14.4494,-153.646	1/2:91:0,38,53:0:0:38,53:1364,1857:-262.664,-151.397,-139.958,-111.622,0,-95.667	1/2:104:0,58,45:0:0:58,45:2076,1578:-297.676,-128.378,-110.919,-169.32,0,-155.774	1/2:59:1,20,38:1:36:20,38:712,1328:-162.813,-105.081,-101.998,-55.0888,0,-46.5873	1/1:26:0,26,0:0:0:26,0:928,0:-83.8383,-7.82678,0,-83.8383,-7.82678,-83.8383	1/2:71:0,28,42:0:0:28,42:976,1476:-199.506,-120.135,-111.706,-79.3714,0,-66.7282	1/1:29:0,29,0:0:0:29,0:1031,0:-93.1026,-8.72987,0,-93.1026,-8.72987,-93.1026	1/2:200:0,121,79:0:0:121,79:4331,2801:-581.37,-228.187,-191.763,-353.178,0,-329.397	1/2:210:0,120,88:0:0:120,88:4287,3101:-601.973,-252.443,-216.32,-349.524,0,-323.034	1/2:34:0,22,12:0:0:22,12:773,421:-97.526,-34.61,-27.9874,-63.2668,0,-59.6545	1/2:191:0,113,77:0:0:113,77:4044,2724:-551.672,-221.895,-187.878,-329.851,0,-306.672	1/2:179:0,102,74:0:0:102,74:3613,2595:-505.489,-211.173,-180.468,-294.318,0,-272.042	1/2:90:0,47,42:0:0:47,42:1688,1483:-258.482,-120.779,-106.631,-137.718,0,-125.075	1/1:18:0,18,0:0:0:18,0:644,0:-58.2906,-5.41854,0,-58.2906,-5.41854,-58.2906	1/2:33:0,15,18:0:0:15,18:540,638:-96.3942,-52.3305,-47.815,-44.4211,0,-39.0025	1/1:24:0,24,0:0:0:24,0:843,0:-76.188,-7.22472,0,-76.188,-7.22472,-76.188	1/2:14:0,8,6:0:0:8,6:288,212:-41.1205,-17.6173,-15.2091,-23.8592,0,-22.053	1/2:13:0,10,3:0:0:10,3:360,102:-38.0028,-8.61329,-5.60299,-29.734,0,-28.8309	1/2:151:0,84,65:0:0:84,65:3008,2295:-432.215,-186.905,-161.619,-245.334,0,-225.768	1/2:144:0,71,72:0:0:71,72:2544,2542:-414.558,-207.075,-185.702,-207.616,0,-185.942	1/2:106:0,53,53:0:0:53,53:1873,1861:-304.352,-151.812,-135.857,-152.892,0,-136.938	1/1:6:0,6,0:0:0:6,0:207,0:-18.9669,-1.80618,0,-18.9669,-1.80618,-18.9669	1/1:138:0,137,0:0:0:137,0:4854,0:-436.656,-41.2411,0,-436.656,-41.2411,-436.656	1/2:40:0,22,17:0:0:22,17:774,611:-112.867,-49.8647,-43.242,-63.0172,0,-57.8996	1/2:121:0,62,59:0:0:62,59:2173,2091:-347.454,-170.637,-151.973,-177.169,0,-159.408	1/2:72:0,37,35:0:0:37,35:1320,1240:-208.973,-101.364,-90.2262,-107.964,0,-97.4278	1/2:68:0,37,31:0:0:37,31:1308,1107:-197.135,-90.6068,-79.4687,-106.883,0,-97.5515	1/1:71:0,71,0:0:0:71,0:2524,0:-227.41,-21.3731,0,-227.41,-21.3731,-227.41	1/2:63:0,36,27:0:0:36,27:1279,958:-182.624,-78.4039,-67.5668,-104.575,0,-96.4476	1/1:155:0,154,0:0:0:154,0:5501,0:-494.933,-46.3586,0,-494.933,-46.3586,-494.933	1/2:95:0,52,43:0:0:52,43:1832,1517:-273.031,-123.879,-108.226,-149.504,0,-136.56	1/2:161:0,85,76:0:0:85,76:3052,2688:-468.249,-219.283,-193.696,-249.321,0,-226.443	1/1:126:0,126,0:0:0:126,0:4476,0:-403.009,-37.9298,0,-403.009,-37.9298,-403.009	1/2:24:0,14,10:0:0:14,10:495,359:-69.9554,-29.6433,-25.4289,-40.6686,0,-37.6583	1/1:139:0,138,0:0:0:138,0:4943,0:-444.659,-41.5421,0,-444.659,-41.5421,-444.659	1/1:21:0,21,0:0:0:21,0:756,0:-68.3672,-6.32163,0,-68.3672,-6.32163,-68.3672	1/2:31:0,18,13:0:0:18,13:635,463:-89.7966,-38.0927,-32.6742,-52.0584,0,-48.145	1/2:102:0,61,40:0:0:61,40:2145,1425:-290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chr09	16325041	.	AAT	AGT,GGT	216460	PASS	AB=0.509531,0.483578;ABP=8.39122,18.9862;AC=126,62;AF=0.670213,0.329787;AN=188;AO=7167,3305;CIGAR=1M1X1M,2X1M;DP=10529;DPB=10529;DPRA=0,1.10699;EPP=15566,7179.73;EPPR=13.8677;GTI=0;LEN=1,2;MEANALT=2.18085,2.58209;MQM=59.9902,59.9855;MQMR=60;NS=94;NUMALT=2;ODDS=13.3262;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=254153,113918;QR=169;RO=5;RPL=4,19;RPP=15531.2,7015.64;RPPR=13.8677;RPR=7163,3286;RUN=1,1;SAF=4,19;SAP=15531.2,7015.64;SAR=7163,3286;SRF=0;SRP=13.8677;SRR=5;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:16:0,9,7:0:0:9,7:320,243:-46.1723,-20.0898,-17.3805,-26.4331,0,-24.3259	1/1:98:0,98,0:0:0:98,0:3461,0:-311.702,-29.5009,0,-311.702,-29.5009,-311.702	1/1:118:0,118,0:0:0:118,0:4170,0:-375.481,-35.5215,0,-375.481,-35.5215,-375.481	1/1:206:0,205,1:0:0:205,1:7256,36:-652.734,-61.7112,0,-649.796,-58.4139,-649.495	1/2:41:0,14,25:0:0:14,25:504,885:-113.246,-72.1189,-67.9045,-41.1588,0,-33.633	1/2:36:0,16,20:0:0:16,20:561,659:-99.2568,-53.5973,-48.7808,-46.0006,0,-39.98	1/1:163:0,163,0:0:0:163,0:5799,0:-522.025,-49.0679,0,-522.025,-49.0679,-522.025	1/2:134:0,61,72:0:0:61,72:2144,2531:-380.627,-206.115,-187.752,-174.612,0,-152.937	1/2:69:0,46,22:0:0:46,22:1652,753:-195.876,-61.103,-47.2557,-134.761,0,-128.139	1/2:71:0,30,39:0:0:30,39:1071,1349:-196.948,-109.63,-100.599,-87.3345,0,-75.5943	1/2:136:0,65,70:0:0:65,70:2315,2363:-380.189,-191.493,-171.926,-188.683,0,-167.611	1/1:84:1,83,0:1:27:83,0:2959,0:-263.844,-22.5867,0,-264.145,-24.9855,-266.272	1/2:104:1,47,56:1:34:47,56:1680,1966:-293.942,-157.259,-145.868,-134.241,0,-120.141	1/2:148:0,74,74:0:0:74,74:2624,2553:-421.518,-207.743,-185.466,-214.125,0,-191.848	1/2:82:0,36,46:0:0:36,46:1276,1606:-234.935,-130.981,-120.144,-104.306,0,-90.4586	1/2:79:1,41,37:1:36:41,37:1433,1278:-217.158,-100.885,-91.4802,-113.624,0,-105.424	1/2:113:0,55,57:0:0:55,57:1963,1928:-316.423,-156.382,-139.825,-160.136,0,-142.977	1/2:99:0,53,46:0:0:53,46:1872,1598:-282.713,-130.261,-114.307,-152.802,0,-138.954	1/1:65:0,65,0:0:0:65,0:2306,0:-207.801,-19.567,0,-207.801,-19.567,-207.801	1/2:218:0,114,103:0:0:114,103:4066,3452:-611.074,-279.609,-245.292,-331.529,0,-300.523	1/2:112:0,56,55:0:0:56,55:1963,1914:-315.48,-155.746,-138.889,-159.85,0,-143.293	1/2:111:0,33,77:0:0:33,77:1177,2702:-315.834,-219.887,-209.953,-95.9421,0,-72.7628	1/1:62:0,62,0:0:0:62,0:2220,0:-200.064,-18.6639,0,-200.064,-18.6639,-200.064	1/2:107:0,55,52:0:0:55,52:1955,1836:-309.18,-149.866,-133.31,-159.668,0,-144.015	1/1:103:0,103,0:0:0:103,0:3658,0:-329.423,-31.0061,0,-329.423,-31.0061,-329.423	1/2:301:0,141,157:0:0:141,157:4984,5445:-848.511,-442.595,-400.15,-405.932,0,-358.671	1/2:253:0,127,125:0:0:127,125:4483,4249:-709.802,-344.738,-306.508,-365.179,0,-327.55	1/2:52:0,29,23:0:0:29,23:1006,785:-145.813,-64.0401,-55.3103,-82.1167,0,-75.193	1/2:252:1,147,104:1:36:147,104:5167,3600:-709.874,-289.601,-248.287,-417.624,0,-389.255	1/2:112:0,66,44:0:0:66,44:2367,1484:-313.368,-120.293,-100.425,-193.113,0,-179.868	1/2:121:0,73,47:0:0:73,47:2609,1630:-345.364,-132.632,-110.657,-212.88,0,-198.731	1/1:25:0,25,0:0:0:25,0:887,0:-80.1481,-7.52575,0,-80.1481,-7.52575,-80.1481	1/2:24:0,16,8:0:0:16,8:572,283:-70.0461,-23.404,-18.5875,-46.9969,0,-44.5887	1/1:10:0,10,0:0:0:10,0:360,0:-32.7443,-3.0103,0,-32.7443,-3.0103,-32.7443	1/2:20:0,8,12:0:0:8,12:268,413:-55.5851,-33.8866,-31.4784,-22.037,0,-18.4246	1/2:18:0,9,8:0:0:9,8:324,255:-47.0557,-20.5945,-17.8852,-26.5356,0,-24.1274	1/2:274:0,148,126:0:0:148,126:5220,4385:-781.942,-356.904,-312.351,-425.389,0,-387.459	1/2:186:0,107,78:0:0:107,78:3809,2691:-529.174,-218.725,-186.515,-310.566,0,-287.086	1/2:138:0,68,69:0:0:68,69:2428,2384:-391.663,-193.708,-173.238,-197.966,0,-177.195	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/1:299:0,298,1:0:0:298,1:10527,36:-946.986,-89.7069,0,-944.048,-86.4097,-943.747	1/2:74:0,42,32:0:0:42,32:1500,1116:-213.412,-91.1127,-78.4694,-122.651,0,-113.018	1/2:145:0,65,80:0:0:65,80:2332,2753:-414.154,-223.933,-204.366,-190.573,0,-166.49	1/2:132:0,64,65:0:0:64,65:2260,2256:-367.495,-183.448,-164.182,-184.106,0,-164.539	1/2:88:0,53,33:0:0:53,33:1883,1109:-243.265,-89.816,-73.8614,-153.434,0,-143.5	1/1:97:0,97,0:0:0:97,0:3451,0:-310.802,-29.1999,0,-310.802,-29.1999,-310.802	1/2:137:0,67,70:0:0:67,70:2390,2425:-392.267,-197.431,-177.262,-195.187,0,-174.115	1/1:167:0,166,0:0:0:166,0:5840,0:-525.355,-49.971,0,-525.355,-49.971,-525.355	1/2:135:0,85,49:0:0:85,49:3039,1737:-389.409,-141.611,-116.023,-247.901,0,-233.15	1/2:146:0,85,60:0:0:85,60:3013,2083:-414.78,-169.316,-143.729,-245.454,0,-227.392	1/1:161:0,161,0:0:0:161,0:5714,0:-514.38,-48.4658,0,-514.38,-48.4658,-514.38	1/2:29:0,17,12:0:0:17,12:598,403:-81.6665,-32.9796,-27.8621,-49.0292,0,-45.4168	1/1:186:0,185,0:0:0:185,0:6545,0:-588.776,-55.6906,0,-588.776,-55.6906,-588.776	1/1:66:0,66,0:0:0:66,0:2356,0:-212.299,-19.868,0,-212.299,-19.868,-212.299	1/2:43:0,26,17:0:0:26,17:928,578:-122.887,-47.2216,-39.3949,-76.0115,0,-70.894	1/2:95:0,48,47:0:0:48,47:1680,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chr09	16491709	.	ATTTTATTTTATTTTTCTG	ATTTATATTTTATTTTTTTTCTG,ATTTTTATTTTATTTTTCTG	53748	PASS	AB=0.429155,0.560279;ABP=184.54,134.427;AC=142,46;AF=0.755319,0.244681;AN=188;AO=5353,2349;CIGAR=4M1I7M3I8M,1M1I18M;DP=7837;DPB=9089.89;DPRA=0,1.5367;EPP=11626.9,5103.8;EPPR=7.35324;GTI=10;LEN=23,1;MEANALT=2.61702,2.96296;MQM=21.9946,24.2669;MQMR=42;NS=94;NUMALT=2;ODDS=2461.24;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=117551,56870;QR=68;RO=2;RPL=0,0;RPP=11626.9,5103.8;RPPR=7.35324;RPR=5353,2349;RUN=1,1;SAF=0,0;SAP=11626.9,5103.8;SAR=5353,2349;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,ins	GT:DP:AD:RO:QR:AO:QA:GL	1/2:37:0,12,25:0:0:12,25:264,607:-57.5784,-40.6746,-37.0623,-17.1014,0,-9.57562	1/1:130:0,127,0:0:0:127,0:2791,0:-217.044,-38.2308,0,-217.044,-38.2308,-217.044	1/1:58:0,55,0:0:0:55,0:1210,0:-94.0512,-16.5567,0,-94.0512,-16.5567,-94.0512	1/1:152:0,149,0:0:0:149,0:3275,0:-254.637,-44.8535,0,-254.637,-44.8535,-254.637	1/2:48:0,17,31:0:0:17,31:373,750:-74.0193,-50.1171,-44.9995,-24.1,0,-14.7681	1/2:54:0,27,27:0:0:27,27:594,648:-81.4853,-43.4454,-35.3176,-38.2405,0,-30.1127	1/2:112:0,40,71:0:0:40,71:879,1726:-171.204,-114.889,-102.848,-56.2943,0,-34.9212	1/1:213:0,210,0:0:0:210,0:4610,0:-358.618,-63.2163,0,-358.618,-63.2163,-358.618	1/1:56:0,53,1:0:0:53,1:1164,25:-90.3949,-15.9546,0,-88.7157,-14.2989,-88.4147	1/1:75:0,69,0:0:0:69,0:1516,0:-117.852,-20.7711,0,-117.852,-20.7711,-117.852	1/2:21:0,10,11:0:0:10,11:220,267:-32.0412,-17.9593,-14.949,-14.2828,0,-10.9715	1/2:19:0,6,13:0:0:6,13:132,317:-29.7659,-21.3177,-19.5115,-8.6457,0,-4.73231	1/1:18:0,17,0:0:0:17,0:372,0:-28.751,-5.11751,0,-28.751,-5.11751,-28.751	1/1:33:0,31,0:0:0:31,0:682,0:-53.0102,-9.33193,0,-53.0102,-9.33193,-53.0102	1/1:20:0,20,0:0:0:20,0:440,0:-34.3962,-6.0206,0,-34.3962,-6.0206,-34.3962	1/2:16:0,5,11:0:0:5,11:109,267:-24.9508,-17.9593,-16.4541,-7.18793,0,-3.8766	1/2:24:0,6,17:0:0:6,17:132,410:-35.5014,-27.053,-25.2468,-8.31353,0,-3.19602	1/1:15:0,15,0:0:0:15,0:329,0:-25.7969,-4.51545,0,-25.7969,-4.51545,-25.7969	1/2:8:0,6,2:0:0:6,2:132,50:-12.0105,-3.57729,-1.77111,-8.6457,0,-8.04364	1/2:202:0,78,122:0:0:78,122:1715,2966:-307.504,-197.637,-174.157,-109.876,0,-73.1508	1/2:75:0,31,44:0:0:31,44:682,1074:-115.642,-71.9645,-62.6326,-43.8777,0,-30.6323	1/2:135:0,31,103:0:0:31,103:681,2486:-208.675,-165.04,-155.708,-43.64,0,-12.6339	1/1:37:0,35,0:0:0:35,0:770,0:-59.8466,-10.5361,0,-59.8466,-10.5361,-59.8466	1/1:82:0,78,4:0:0:78,4:1714,96:-133.29,-23.4803,0,-126.934,-16.9151,-125.73	1/2:60:0,33,27:0:0:33,27:724,654:-90.0484,-43.6494,-33.7154,-46.601,0,-38.4732	1/1:361:0,352,1:0:0:352,1:7724,24:-600.841,-105.963,0,-599.253,-104.38,-598.952	1/2:176:0,75,101:0:0:75,101:1649,2457:-269.511,-163.873,-141.296,-105.838,0,-75.4343	1/1:8:0,6,0:0:0:6,0:132,0:-10.1661,-1.80618,0,-10.1661,-1.80618,-10.1661	1/1:175:0,171,0:0:0:171,0:3753,0:-291.882,-51.4761,0,-291.882,-51.4761,-291.882	1/2:234:0,107,125:0:0:107,125:2348,2993:-348.916,-198.418,-166.208,-150.373,0,-112.744	1/2:144:0,60,83:0:0:60,83:1318,2006:-217.828,-133.375,-115.314,-84.4616,0,-59.4761	1/2:13:0,7,6:0:0:7,6:154,147:-19.8689,-10.0174,-7.91021,-10.055,0,-8.2488	1/2:23:0,9,12:0:0:9,12:196,288:-31.9015,-19.3283,-16.6191,-12.4831,0,-8.87069	1/2:7:0,4,3:0:0:4,3:88,72:-10.6022,-4.97645,-3.77233,-5.82715,0,-4.92406	1/2:12:0,4,7:0:0:4,7:88,169:-16.7286,-11.1038,-9.89967,-5.52145,0,-3.41424	1/1:16:0,15,0:0:0:15,0:329,0:-25.5788,-4.51545,0,-25.5788,-4.51545,-25.5788	1/2:42:0,19,21:0:0:19,21:418,506:-60.1851,-33.4235,-27.704,-26.6371,0,-20.3154	1/2:291:0,121,169:0:0:121,169:2658,4095:-442.47,-272.231,-235.806,-170.219,0,-119.344	1/1:24:0,23,0:0:0:23,0:505,0:-39.2894,-6.92369,0,-39.2894,-6.92369,-39.2894	1/1:6:0,6,0:0:0:6,0:132,0:-10.4519,-1.80618,0,-10.4519,-1.80618,-10.4519	1/1:143:0,137,2:0:0:137,2:3005,50:-233.798,-41.2411,0,-230.44,-37.9144,-229.838	1/1:14:0,14,0:0:0:14,0:308,0:-24.1343,-4.21442,0,-24.1343,-4.21442,-24.1343	1/2:138:0,67,71:0:0:67,71:1471,1711:-207.915,-113.646,-93.4774,-94.4691,0,-73.096	1/2:16:0,6,8:0:0:6,8:132,195:-21.4301,-12.9831,-11.1769,-8.4407,0,-6.03246	1/2:17:0,13,4:0:0:13,4:286,96:-24.8706,-6.56527,-2.65188,-18.5106,0,-17.3065	1/1:78:0,77,0:0:0:77,0:1688,0:-131.285,-23.1793,0,-131.285,-23.1793,-131.285	1/1:170:0,166,0:0:0:166,0:3649,0:-283.676,-49.971,0,-283.676,-49.971,-283.676	1/2:235:0,108,125:0:0:108,125:2372,3027:-353.222,-201.22,-168.709,-151.931,0,-114.302	1/2:120:0,55,65:0:0:55,65:1205,1573:-182.028,-104.765,-88.2088,-77.4626,0,-57.8957	1/1:186:0,181,3:0:0:181,3:3977,72:-309.285,-54.4864,0,-304.519,-49.7563,-303.616	1/2:184:1,99,80:1:36:99,80:2176,1937:-265.029,-125.919,-99.0476,-136.436,0,-115.284	1/2:14:0,7,7:0:0:7,7:154,168:-21.3274,-11.4735,-9.36631,-10.055,0,-7.94777	1/2:166:0,54,110:0:0:54,110:1186,2661:-252.982,-176.983,-160.727,-76.0059,0,-42.8926	1/2:129:0,73,55:0:0:73,55:1602,1329:-190.992,-88.3173,-66.3421,-102.677,0,-86.1208	1/2:20:0,4,16:0:0:4,16:88,388:-31.6257,-25.9931,-24.789,-5.82715,0,-1.01067	1/1:88:0,86,0:0:0:86,0:1889,0:-146.863,-25.8886,0,-146.863,-25.8886,-146.86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chr09	16647022	.	G	A	85093.2	PASS	AB=0.465685;ABP=46.0793;AC=126;AF=0.670213;AN=188;AO=4290;CIGAR=1X;DP=6553;DPB=6553;DPRA=0;EPP=9318.63;EPPR=4908.37;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9879;MQMR=59.988;NS=94;NUMALT=1;ODDS=3.30411;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152668;QR=80646;RO=2259;RPL=0;RPP=9318.63;RPPR=4908.37;RPR=4290;RUN=1;SAF=4290;SAP=9318.63;SAR=0;SRF=2259;SRP=4908.37;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:35,33:35:1252:33:1184:-86.3983,0,-92.515	1/1:84:0,84:0:0:84:3016:-271.67,-25.2865,0	1/1:124:0,124:0:0:124:4382:-394.552,-37.3277,0	1/1:141:0,139:0:0:139:4973:-447.357,-41.8432,0	0/1:54:35,19:35:1248:19:684:-45.6347,0,-96.3692	0/1:68:29,38:29:1040:38:1368:-102.931,0,-73.4241	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	0/1:140:72,68:72:2561:68:2420:-175.91,0,-188.595	0/1:130:61,69:61:2172:69:2436:-180.358,0,-156.613	0/1:66:37,29:37:1308:29:1021:-72.3323,0,-98.1535	0/1:74:39,35:39:1384:35:1241:-89.7171,0,-102.583	1/1:100:0,100:0:0:100:3589:-323.215,-30.103,0	0/1:72:42,30:42:1491:30:1072:-75.1183,0,-112.81	0/1:53:27,26:27:959:26:932:-68.2443,0,-70.6708	0/1:62:38,24:38:1368:24:815:-54.9938,0,-104.757	0/1:58:30,28:30:1080:28:1004:-73.2161,0,-80.0535	0/1:28:13,15:13:468:15:532:-39.7837,0,-34.0308	0/1:28:16,12:16:576:12:432:-30.7924,0,-43.7461	1/1:51:0,51:0:0:51:1809:-163.089,-15.3525,0	0/1:51:23,28:23:828:28:995:-74.5115,0,-59.4916	0/1:144:81,63:81:2901:63:2255:-159.863,0,-217.975	0/1:19:15,4:15:540:4:144:-7.59405,0,-43.217	1/1:77:1,76:1:36:76:2720:-241.445,-19.581,0	0/1:67:39,28:39:1392:28:1004:-70.5069,0,-105.41	1/1:38:0,38:0:0:38:1368:-123.421,-11.4391,0	0/1:169:86,83:86:3072:83:2944:-214.319,0,-225.835	0/1:123:70,53:70:2504:53:1900:-134.251,0,-188.586	0/1:39:26,13:26:936:13:468:-30.7195,0,-72.8193	0/1:87:45,42:45:1608:42:1493:-108.473,0,-118.82	0/1:108:53,55:53:1896:55:1953:-143.533,0,-138.407	0/1:83:37,46:37:1328:46:1640:-122.903,0,-94.8367	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	0/1:27:12,15:12:432:15:536:-40.447,0,-31.0934	1/1:4:0,4:0:0:4:129:-11.9277,-1.20412,0	0/1:12:4,8:4:144:8:284:-22.291,0,-9.70126	0/1:19:12,7:12:432:7:248:-16.9446,0,-33.5016	0/1:145:72,73:72:2575:73:2556:-186.637,0,-188.35	0/1:59:34,25:34:1209:25:885:-62.2058,0,-91.3534	0/1:61:28,33:28:1008:33:1164:-86.703,0,-72.6735	1/1:5:0,5:0:0:5:165:-15.1736,-1.50515,0	1/1:72:1,71:1:36:71:2522:-223.631,-18.0759,0	0/1:52:24,28:24:856:28:989:-73.6685,0,-61.7075	0/1:148:98,50:98:3486:50:1766:-114.667,0,-269.397	0/1:51:26,25:26:928:25:896:-65.6078,0,-68.4857	0/1:54:29,25:29:1040:25:892:-64.3441,0,-77.6587	1/1:85:1,84:1:36:84:3004:-266.993,-21.9893,0	0/1:103:55,48:55:1976:48:1705:-122.729,0,-147.109	1/1:96:3,93:3:108:93:3279:-285.253,-18.8237,0	0/1:45:29,16:29:1040:16:572:-38.2671,0,-80.368	0/1:79:33,46:33:1184:46:1643:-124.376,0,-83.042	1/1:26:0,26:0:0:26:928:-83.8383,-7.82678,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	1/1:86:0,86:0:0:86:3055:-275.179,-25.8886,0	1/1:33:0,33:0:0:33:1173:-105.876,-9.93399,0	0/1:12:8,4:8:269:4:144:-9.70126,0,-20.9238	0/1:147:71,76:71:2514:76:2716:-200.431,0,-182.258	0/1:36:16,20:16:576:20:716:-53.9306,0,-41.3379	0/1:19:9,10:9:324:10:360:-27.0247,0,-23.7863	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:82:45,37:45:1620:37:1328:-95.1378,0,-121.383	0/1:89:47,42:47:1677:42:1504:-108.863,0,-124.424	1/1:11:0,11:0:0:11:381:-34.6206,-3.31133,0	0/1:63:44,19:44:1561:19:680:-42.5643,0,-121.815	0/1:152:75,77:75:2665:77:2734:-200.544,0,-194.338	0/1:69:35,34:35:1260:34:1220:-89.3357,0,-92.9344	1/1:52:0,52:0:0:52:1849:-166.688,-15.6536,0	0/1:83:38,45:38:1360:45:1620:-121.104,0,-97.7151	0/1:106:71,35:71:2540:35:1245:-80.4435,0,-196.942	1/1:61:1,60:1:36:60:2156:-190.708,-14.7646,0	1/1:73:0,73:0:0:73:2608:-234.968,-21.9752,0	0/1:36:19,17:19:684:17:612:-44.5764,0,-51.0532	0/1:26:20,6:20:716:6:204:-10.8652,0,-56.9409	1/1:61:0,60:0:0:60:2122:-191.033,-18.0618,0	0/1:85:44,41:44:1565:41:1472:-107.189,0,-115.552	1/1:146:0,146:0:0:146:5177:-466.056,-43.9504,0	1/1:97:0,97:0:0:97:3431:-308.915,-29.1999,0	0/1:89:43,46:43:1514:46:1607:-118.122,0,-109.757	1/1:101:0,101:0:0:101:3609:-325.015,-30.404,0	0/1:15:9,6:9:316:6:216:-15.2751,0,-24.2634	1/1:90:1,89:1:36:89:3169:-281.835,-23.4944,0	0/1:40:19,21:19:676:21:707:-51.8982,0,-49.1268	1/1:122:0,122:0:0:122:4353:-391.944,-36.7257,0	0/1:56:26,30:26:906:30:1056:-78.4904,0,-64.9933	1/1:57:0,57:0:0:57:2035:-183.422,-17.1587,0	0/1:35:14,21:14:500:21:737:-56.1146,0,-34.8001	1/1:110:2,108:2:72:108:3797:-335.088,-26.2766,0	0/1:25:14,11:14:500:11:387:-27.6402,0,-37.8104	0/1:64:37,27:37:1313:27:964:-67.8109,0,-99.2038	1/1:77:0,77:0:0:77:2764:-249.001,-23.1793,0	0/1:48:29,19:29:1029:19:684:-47.4409,0,-78.4717	0/1:109:58,51:58:2075:51:1832:-132.349,0,-154.208	0/1:66:46,20:46:1652:20:682:-41.8261,0,-129.1	1/1:112:0,112:0:0:112:4032:-363.066,-33.7154,0	1/1:102:0,102:0:0:102:3637:-327.534,-30.7051,0
chr09	16647073	.	A	G	275589	PASS	AB=0.490514;ABP=10.8793;AC=126;AF=0.670213;AN=188;AO=10739;CIGAR=1X;DP=15887;DPB=15887;DPRA=0;EPP=23305.1;EPPR=11166.6;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9868;MQMR=59.994;NS=94;NUMALT=1;ODDS=13.217;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=380034;QR=183924;RO=5145;RPL=4114;RPP=1277.93;RPPR=177.508;RPR=6625;RUN=1;SAF=4112;SAP=1282;SAR=6627;SRF=2250;SRP=178.596;SRR=2895;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:88:43,45:43:1510:45:1567:-114.827,0,-109.701	1/1:226:0,226:0:0:226:7981:-718.316,-68.0328,0	1/1:226:0,226:0:0:226:8021:-721.915,-68.0328,0	1/1:400:0,400:0:0:400:14203:-1278.04,-120.412,0	0/1:161:91,70:91:3260:70:2492:-176.068,0,-245.155	0/1:126:54,72:54:1940:72:2536:-190.561,0,-136.946	1/1:180:3,177:3:104:177:6252:-553.076,-44.4826,0	0/1:336:171,164:171:6111:164:5762:-417.574,0,-448.966	0/1:241:109,132:109:3893:132:4677:-348.544,0,-278.015	0/1:215:89,126:89:3196:126:4480:-338.649,0,-223.141	0/1:153:84,69:84:2985:69:2454:-175.056,0,-222.824	1/1:161:0,161:0:0:161:5602:-504.312,-48.4658,0	0/1:138:80,58:80:2859:58:2028:-141.248,0,-216.005	0/1:134:64,70:64:2291:70:2467:-181.944,0,-166.113	0/1:139:78,61:78:2776:61:2137:-150.752,0,-208.236	0/1:122:58,64:58:2070:64:2259:-166.845,0,-149.844	0/1:113:52,61:52:1849:61:2121:-157.136,0,-132.672	0/1:80:45,35:45:1607:35:1223:-86.2877,0,-120.837	1/1:98:0,98:0:0:98:3490:-314.31,-29.5009,0	0/1:188:90,98:90:3216:98:3473:-256.187,0,-233.069	0/1:310:168,142:168:5997:142:4993:-356.203,0,-446.517	0/1:78:54,24:54:1940:24:839:-52.3469,0,-151.396	1/1:211:1,210:1:36:210:7445:-666.5,-59.9191,0	0/1:211:90,121:90:3212:121:4307:-324.291,0,-225.783	1/1:108:0,108:0:0:108:3824:-344.357,-32.5112,0	0/1:458:227,231:227:8116:231:8209:-600.955,0,-592.584	0/1:327:155,172:155:5551:172:6139:-454.172,0,-401.277	0/1:78:45,33:45:1584:33:1141:-79.5103,0,-119.367	0/1:280:122,158:122:4372:158:5639:-423.341,0,-309.365	0/1:254:105,149:105:3759:149:5240:-395.281,0,-262.047	0/1:228:119,109:119:4264:109:3808:-274.283,0,-315.303	1/1:26:0,26:0:0:26:936:-84.5595,-7.82678,0	0/1:30:16,14:16:576:14:496:-35.9434,0,-43.1441	1/1:10:0,10:0:0:10:347:-31.5636,-3.0103,0	0/1:25:7,18:7:252:18:640:-50.4036,0,-15.5032	0/1:27:17,10:17:608:10:339:-22.7097,0,-46.9242	0/1:339:166,173:166:5964:173:6158:-452.271,0,-434.815	0/1:202:96,106:96:3440:106:3744:-276.353,0,-249.005	0/1:126:71,55:71:2510:55:1917:-134.873,0,-188.223	1/1:12:0,12:0:0:12:419:-38.0427,-3.61236,0	1/1:231:1,230:1:36:230:8123:-727.493,-65.9397,0	0/1:80:40,40:40:1417:40:1416:-103.655,0,-103.743	0/1:269:169,100:169:6035:100:3537:-237.561,0,-462.278	0/1:141:66,75:66:2372:75:2666:-197.74,0,-171.292	0/1:128:73,55:73:2620:55:1917:-134.271,0,-197.515	1/1:175:1,174:1:36:174:6173:-552.073,-49.082,0	0/1:228:114,114:114:4079:114:4063:-297.223,0,-298.661	1/1:250:5,245:5:176:245:8625:-760.075,-59.0725,0	0/1:122:64,58:64:2288:58:2076:-150.385,0,-169.456	0/1:220:106,114:106:3796:114:4064:-299.721,0,-275.593	1/1:143:0,143:0:0:143:5077:-457.077,-43.0473,0	0/1:16:12,4:12:428:4:140:-8.1281,0,-34.0423	1/1:215:0,215:0:0:215:7642:-687.821,-64.7215,0	1/1:156:0,156:0:0:156:5584:-502.682,-46.9607,0	0/1:20:10,10:10:356:10:351:-25.9061,0,-26.3606	0/1:256:141,115:141:5034:115:4030:-285.825,0,-376.143	0/1:113:53,60:53:1885:60:2118:-156.872,0,-135.91	0/1:28:12,16:12:432:16:572:-43.3846,0,-30.7359	0/1:21:12,9:12:432:9:324:-23.1842,0,-32.8996	0/1:177:83,93:83:2976:93:3309:-244.845,0,-214.889	0/1:210:114,96:114:4068:96:3361:-239.49,0,-303.089	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	0/1:249:109,140:109:3904:140:4952:-370.874,0,-276.597	0/1:335:172,163:172:6147:163:5792:-420.55,0,-452.485	0/1:143:70,73:70:2503:73:2594:-190.661,0,-182.475	1/1:138:0,138:0:0:138:4891:-440.344,-41.5421,0	0/1:257:122,135:122:4367:135:4793:-354.164,0,-315.839	0/1:184:126,58:126:4523:58:2058:-130.101,0,-351.846	1/1:91:1,90:1:36:90:3081:-273.831,-23.7955,0	1/1:169:0,169:0:0:169:5997:-539.84,-50.8741,0	0/1:130:71,59:71:2505:59:2050:-145.632,0,-186.566	0/1:35:25,10:25:896:10:356:-21.8452,0,-70.4243	1/1:140:0,140:0:0:140:4937:-444.484,-42.1442,0	0/1:152:74,78:74:2622:78:2782:-204.863,0,-190.469	1/1:398:0,398:0:0:398:14091:-1267.93,-119.81,0	1/1:282:1,281:1:36:281:9977:-894.268,-81.2922,0	0/1:220:106,114:106:3777:114:4051:-298.55,0,-273.902	1/1:251:0,251:0:0:251:8931:-803.778,-75.5585,0	0/1:35:26,9:26:936:9:320:-18.6063,0,-74.0234	1/1:225:1,224:1:36:224:7976:-714.266,-64.1335,0	0/1:152:71,81:71:2556:81:2892:-214.76,0,-184.533	1/1:364:0,363:0:0:363:12910:-1161.36,-109.274,0	0/1:177:95,82:95:3404:82:2899:-207.864,0,-253.292	1/1:120:0,120:0:0:120:4252:-382.86,-36.1236,0	0/1:139:62,77:62:2228:77:2716:-202.84,0,-158.941	1/1:241:4,237:4:135:237:8356:-739.571,-60.0657,0	0/1:71:40,31:40:1436:31:1077:-75.8631,0,-108.165	0/1:144:80,64:80:2872:64:2256:-159.953,0,-215.368	1/1:165:0,165:0:0:165:5814:-523.378,-49.67,0	0/1:81:41,40:41:1472:40:1415:-103.263,0,-108.393	0/1:191:106,85:106:3787:85:3009:-213.545,0,-283.532	0/1:136:96,40:96:3432:40:1389:-84.3621,0,-268.154	1/1:219:0,219:0:0:219:7765:-698.887,-65.9256,0	1/1:172: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chr09	17188682	.	A	T,C	235586	PASS	AB=0.489746,0.509984;ABP=9.77901,9.42745;AC=126,62;AF=0.670213,0.329787;AN=188;AO=7389,3801;CIGAR=1X,1X;DP=11193;DPB=11193;DPRA=17.1828,1.26576;EPP=16048,8248.09;EPPR=9.52472;GTI=1;LEN=1,1;MEANALT=1.70968,1.98507;MQM=59.9786,59.96;MQMR=60;NS=94;NUMALT=2;ODDS=5.10558;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=263931,136118;QR=93;RO=3;RPL=0,0;RPP=16048,8256.78;RPPR=9.52472;RPR=7389,3801;RUN=1,1;SAF=7389,3800;SAP=16048,8248.09;SAR=0,1;SRF=3;SRP=9.52472;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:17:0,6,11:0:0:6,11:212,392:-49.5731,-32.3087,-30.5025,-17.6186,0,-14.3073	1/1:258:0,258,0:0:0:258,0:9210,0:-828.87,-77.6657,0,-828.87,-77.6657,-828.87	1/1:141:0,141,0:0:0:141,0:5015,0:-451.495,-42.4452,0,-451.495,-42.4452,-451.495	1/1:255:0,253,2:0:0:253,2:9054,72:-814.473,-76.1606,0,-808.598,-69.9259,-807.996	1/2:204:0,89,115:0:0:89,115:3196,4128:-597.797,-337.085,-310.293,-261.071,0,-226.452	1/2:84:0,31,53:0:0:31,53:1093,1880:-242.517,-153.524,-144.192,-89.3457,0,-73.3911	1/1:75:0,74,1:0:0:74,1:2641,36:-237.575,-22.2762,0,-234.638,-18.979,-234.337	1/2:122:0,48,74:0:0:48,74:1728,2612:-354.02,-213.021,-198.571,-141.356,0,-119.08	1/2:48:0,25,23:0:0:25,23:840,828:-135.949,-67.9204,-60.3947,-68.3773,0,-61.4536	1/2:89:0,39,50:0:0:39,50:1404,1796:-261.43,-146.871,-135.131,-114.919,0,-99.8676	1/2:85:0,47,38:0:0:47,38:1692,1364:-249.68,-111.621,-97.4728,-138.418,0,-126.979	1/1:88:0,88,0:0:0:88,0:3164,0:-284.979,-26.4906,0,-284.979,-26.4906,-284.979	1/2:89:0,45,44:0:0:45,44:1591,1584:-259.179,-129.603,-116.056,-129.933,0,-116.688	1/2:99:0,44,55:0:0:44,55:1580,1976:-290.445,-161.558,-148.313,-129.246,0,-112.69	1/2:85:0,34,51:0:0:34,51:1216,1828:-248.602,-149.448,-139.213,-99.5115,0,-84.159	1/2:93:0,39,54:0:0:39,54:1385,1939:-271.38,-158.531,-146.791,-113.206,0,-96.9504	1/2:99:0,47,52:0:0:47,52:1677,1864:-289.095,-152.386,-138.237,-137.067,0,-121.413	1/2:77:0,34,43:0:0:34,43:1215,1548:-225.731,-126.669,-116.434,-99.4207,0,-86.4764	1/1:54:0,54,0:0:0:54,0:1940,0:-174.876,-16.2556,0,-174.876,-16.2556,-174.876	1/2:249:0,142,107:0:0:142,107:5050,3848:-725.828,-314.289,-271.543,-411.896,0,-379.686	1/2:107:0,60,47:0:0:60,47:2125,1684:-310.798,-137.699,-119.637,-173.455,0,-159.307	1/2:229:0,98,131:0:0:98,131:3528,4684:-670.152,-382.285,-352.784,-288.226,0,-248.791	1/1:51:0,51,0:0:0:51,0:1836,0:-165.521,-15.3525,0,-165.521,-15.3525,-165.521	1/2:114:0,61,53:0:0:61,53:2177,1877:-330.729,-153.252,-134.89,-177.832,0,-161.877	1/1:50:0,50,0:0:0:50,0:1800,0:-162.282,-15.0515,0,-162.282,-15.0515,-162.282	1/2:351:0,187,164:0:0:187,164:6673,5848:-1021.04,-477.063,-420.771,-544.337,0,-494.968	1/2:224:1,115,108:1:21:115,108:4089,3857:-645.932,-313.013,-279.982,-331.777,0,-300.854	1/2:40:0,23,17:0:0:23,17:828,608:-117.496,-49.9345,-43.0108,-67.9204,0,-62.8029	1/2:403:0,197,206:0:0:197,206:7031,7391:-1176.41,-603.222,-543.919,-573.546,0,-511.534	1/2:121:0,67,54:0:0:67,54:2404,1936:-354.35,-158.261,-138.092,-196.447,0,-180.192	1/2:108:0,53,55:0:0:53,55:1885,1971:-314.723,-161.108,-145.154,-153.972,0,-137.415	1/1:21:0,21,0:0:0:21,0:756,0:-68.3672,-6.32163,0,-68.3672,-6.32163,-68.3672	1/2:24:0,15,9:0:0:15,9:536,324:-70.4971,-26.7966,-22.2811,-44.0594,0,-41.3501	1/1:13:0,13,0:0:0:13,0:468,0:-42.4596,-3.91339,0,-42.4596,-3.91339,-42.4596	2/2:7:0,0,7:0:0:0,7:0,252:-23.029,-23.029,-23.029,-2.10721,-2.10721,0	1/2:15:0,2,13:0:0:2,13:72,464:-44.0594,-38.1841,-37.5821,-6.23466,0,-2.32127	1/2:307:0,138,169:0:0:138,169:4941,6078:-899.182,-496.245,-454.702,-403.296,0,-352.422	1/2:275:1,157,117:1:36:157,117:5602,4185:-794.466,-338.312,-293.988,-453.515,0,-421.231	1/2:75:0,32,43:0:0:32,43:1152,1548:-220.666,-126.669,-117.036,-94.3572,0,-81.4129	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/1:172:0,168,4:0:0:168,4:5999,144:-539.652,-50.573,0,-527.902,-38.4635,-526.698	1/2:35:0,12,23:0:0:12,23:432,828:-103.169,-67.9204,-64.3081,-35.6088,0,-28.6851	1/2:322:0,155,167:0:0:155,167:5522,5980:-938.051,-488.034,-441.374,-450.373,0,-400.101	1/2:122:0,61,61:0:0:61,61:2173,2188:-355.937,-178.823,-160.46,-177.472,0,-159.109	1/2:98:0,52,46:0:0:52,46:1837,1643:-283.91,-134.31,-118.657,-149.955,0,-136.108	1/1:64:0,64,0:0:0:64,0:2300,0:-207.261,-19.2659,0,-207.261,-19.2659,-207.261	1/2:164:0,88,76:0:0:88,76:3144,2728:-479.222,-222.884,-196.394,-256.695,0,-233.817	1/1:268:0,268,0:0:0:268,0:9571,0:-861.343,-80.676,0,-861.343,-80.676,-861.343	1/1:88:0,88,0:0:0:88,0:3136,0:-282.465,-26.4906,0,-282.465,-26.4906,-282.465	1/2:224:0,79,145:0:0:79,145:2825,5189:-653.847,-423.498,-399.717,-230.706,0,-187.056	1/1:140:0,139,1:0:0:139,1:4992,36:-449.066,-41.8432,0,-446.129,-38.5459,-445.828	1/2:14:0,9,5:0:0:9,5:324,180:-41.4837,-15.0469,-12.3376,-26.7966,0,-25.2914	1/1:139:0,139,0:0:0:139,0:4951,0:-445.737,-41.8432,0,-445.737,-41.8432,-445.737	1/1:22:0,22,0:0:0:22,0:773,0:-69.8895,-6.62266,0,-69.8895,-6.62266,-69.8895	1/2:20:0,7,13:0:0:7,13:252,464:-58.7471,-38.1841,-36.0769,-20.9217,0,-17.0084	1/2:162:0,81,81:0:0:81,81:2863,2895:-469.556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chr09	17188722	.	G	T	117319	PASS	AB=0.320093;ABP=3025.18;AC=124;AF=0.659574;AN=188;AO=7009;CIGAR=1X;DP=14622;DPB=14622;DPRA=15.7118;EPP=15222.9;EPPR=16491;GTI=16;LEN=1;MEANALT=1.13978;MQM=59.9862;MQMR=59.9621;NS=94;NUMALT=1;ODDS=0.736521;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=241141;QR=268702;RO=7597;RPL=6999;RPP=15136.1;RPPR=15.7359;RPR=10;RUN=1;SAF=6999;SAP=15136.1;SAR=10;SRF=3692;SRP=15.9783;SRR=3905;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:55,7:55:1905:7:244:-3.63557,0,-153.06	1/1:244:0,244:0:0:244:8377:-753.962,-73.4513,0	1/1:134:0,134:0:0:134:4662:-419.748,-40.338,0	1/1:236:2,234:2:72:234:8110:-723.11,-64.2064,0	0/1:241:162,79:162:5770:79:2683:-169.17,0,-446.869	0/1:119:89,30:89:3173:30:1031:-57.2751,0,-249.971	1/1:72:1,71:1:36:71:2423:-214.728,-18.0759,0	0/1:217:170,47:170:6002:47:1641:-82.6524,0,-474.771	0/1:96:73,23:73:2590:23:749:-38.8142,0,-204.45	0/1:144:104,39:104:3644:39:1324:-76.0454,0,-284.757	0/1:150:106,43:106:3761:43:1477:-88.0055,0,-293.477	1/1:80:0,80:0:0:80:2689:-242.254,-24.0824,0	0/1:151:109,42:109:3860:42:1413:-82.0037,0,-302.138	0/1:147:102,45:102:3612:45:1503:-91.3035,0,-281.035	0/1:121:88,33:88:3091:33:1098:-62.6905,0,-241.992	0/1:128:89,39:89:3179:39:1336:-82.0027,0,-247.802	0/1:128:80,47:80:2789:47:1624:-107.855,0,-212.66	0/1:105:73,32:73:2600:32:1118:-69.3178,0,-202.641	1/1:49:0,49:0:0:49:1728:-155.805,-14.7505,0	0/1:417:281,136:281:9966:136:4684:-296.205,0,-771.304	0/1:213:163,49:163:5764:49:1702:-89.3253,0,-454.739	0/1:315:213,97:213:7547:97:3372:-210.04,0,-585.24	1/1:47:0,47:0:0:47:1624:-146.446,-14.1484,0	0/1:132:76,56:76:2675:56:1934:-134.6,0,-201.256	1/1:48:3,45:3:108:45:1541:-128.901,-4.37427,0	0/1:526:347,179:347:12312:179:6264:-405.518,0,-949.388	0/1:385:273,111:273:9625:111:3770:-223.552,0,-750.255	0/1:56:32,24:32:1115:24:831:-58.2481,0,-83.7961	0/1:571:383,188:383:13592:188:6484:-411.777,0,-1051.19	0/1:177:114,62:114:4042:62:2152:-140.604,0,-310.622	0/1:163:116,46:116:4125:46:1598:-94.9912,0,-322.316	1/1:20:0,20:0:0:20:688:-62.2375,-6.0206,0	0/1:29:13,16:13:455:16:556:-41.6373,0,-32.5521	1/1:13:0,13:0:0:13:460:-41.7354,-3.91339,0	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/0:22:20,2:20:708:2:63:0,-0.639505,-58.0591	0/1:419:284,135:284:9996:135:4617:-289.577,0,-773.461	0/1:345:200,145:200:7097:145:5029:-348.913,0,-534.94	0/1:103:72,31:72:2530:31:1072:-65.779,0,-196.944	1/1:8:0,8:0:0:8:275:-25.0835,-2.40824,0	1/1:172:10,162:10:356:162:5547:-467.018,-19.4195,0	0/1:55:44,11:44:1576:11:388:-18.7007,0,-125.575	0/1:452:307,145:307:10769:145:5036:-317.333,0,-833.066	0/1:143:86,57:86:3054:57:1909:-129.034,0,-232.042	0/1:135:89,46:89:3117:46:1586:-102.389,0,-240.118	1/1:65:0,65:0:0:65:2248:-202.581,-19.567,0	0/1:238:156,82:156:5542:82:2800:-180.596,0,-427.261	1/1:255:2,253:2:63:253:8722:-779.023,-70.7795,0	1/1:86:0,86:0:0:86:2962:-266.818,-25.8886,0	0/1:354:275,79:275:9777:79:2760:-142.079,0,-773.164	1/1:129:1,128:1:36:128:4417:-394.117,-35.2346,0	0/1:15:6,9:6:216:9:316:-24.2634,0,-15.2751	1/1:130:1,129:1:36:129:4404:-392.947,-35.5356,0	1/1:22:0,22:0:0:22:735:-66.4596,-6.62266,0	0/1:20:13,7:13:456:7:248:-16.6436,0,-35.3526	0/1:284:210,73:210:7399:73:2495:-139.255,0,-580.413	0/1:22:10,12:10:347:12:420:-31.5114,0,-24.941	0/1:23:16,7:16:572:7:231:-14.1895,0,-44.8897	0/1:23:19,4:19:652:4:140:-6.02089,0,-52.0746	0/1:119:91,28:91:3202:28:979:-52.5995,0,-252.581	0/1:209:147,62:147:5203:62:2126:-128.692,0,-405.497	1/1:21:0,21:0:0:21:732:-66.2014,-6.32163,0	0/1:327:215,112:215:7636:112:3840:-247.368,0,-588.842	0/1:344:211,133:211:7470:133:4573:-308.194,0,-568.793	0/1:135:83,52:83:2942:52:1775:-119.389,0,-224.373	1/1:133:0,133:0:0:133:4551:-409.772,-40.037,0	0/1:284:198,86:198:7049:86:2991:-183.931,0,-548.924	0/0:246:231,15:231:8202:15:504:0,-28.3751,-692.518	1/1:22:1,21:1:36:21:731:-62.5122,-3.02439,0	1/1:33:0,33:0:0:33:1131:-102.092,-9.93399,0	0/1:135:79,56:79:2814:56:1952:-135.314,0,-212.86	0/1:16:12,4:12:423:4:144:-8.49714,0,-33.5886	1/1:43:0,43:0:0:43:1447:-130.516,-12.9443,0	0/1:114:90,24:90:3190:24:848:-42.3222,0,-253.007	1/1:130:1,129:1:36:129:4413:-393.754,-35.5356,0	1/1:227:0,227:0:0:227:7826:-704.401,-68.3338,0	0/1:399:243,156:243:8573:156:5419:-367.711,0,-651.465	1/1:173:4,169:4:140:169:5817:-510.719,-39.1336,0	0/1:24:13,11:13:459:11:396:-28.758,0,-34.4194	1/1:189:3,186:3:108:186:6403:-566.306,-46.8195,0	0/1:294:159,135:159:5609:135:4701:-334.755,0,-416.434	1/1:205:3,202:3:108:202:6918:-612.638,-51.636,0	0/1:160:111,48:111:3898:48:1671:-102.295,0,-302.794	1/1:66:1,65:1:36:65:2236:-197.906,-16.2697,0	0/1:167:103,64:103:3634:64:2160:-144.394,0,-276.997	1/1:201:8,193:8:284:193:6525:-561.464,-34.6037,0	0/1:67:42,24:42:1459:24:821:-54.0137,0,-111.412	0/1:151:102,49:102:3614:49:1642:-102.605,0,-280.012	1/1:88:1,87:1:27:87:2932:-261.423,-23.7909,0	0/1:70:54,16:54:1932:16:547:-28.4808,0,-153.084	0/1:155:118,36:118:4137:36:1254:-66.4425,0,-325.608	0/1:156:124,32:124:4388:32:1118:-53.9644,0,-348.133	1/1:109:1,108:1:32:108:3770:-336.304,-29.613,0	1/1:144:0,144:0:0:144:4938:-444.589,-43.3483,0
chr09	17188725	.	A	C	184012	PASS	AB=0.671912;ABP=2825.17;AC=63;AF=0.335106;AN=188;AO=7674;CIGAR=1X;DP=15033;DPB=15033;DPRA=2.10833;EPP=16666.9;EPPR=15982.9;GTI=15;LEN=1;MEANALT=1;MQM=59.9586;MQMR=59.9855;NS=94;NUMALT=1;ODDS=0.77434;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=271902;QR=263359;RO=7359;RPL=3762;RPP=9.37701;RPPR=15861.5;RPR=3912;RUN=1;SAF=3762;SAP=9.37701;SAR=3912;SRF=7345;SRP=15861.5;SRR=14;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:7,55:7:252:55:1956:-157.652,0,-4.3651	0/0:260:260,0:260:9320:0:0:0,-78.2678,-838.756	0/0:136:136,0:136:4880:0:0:0,-40.9401,-439.351	0/0:251:249,2:249:8935:2:72:0,-68.7218,-797.29	0/1:255:91,164:91:3256:164:5823:-447.424,0,-216.498	0/1:119:29,90:29:1027:90:3168:-249.522,0,-56.9196	0/0:75:74,1:74:2660:1:36:0,-18.979,-236.047	0/1:221:49,172:49:1760:172:6061:-478.904,0,-92.1562	0/1:99:24,75:24:829:75:2668:-210.562,0,-45.122	0/1:145:39,106:39:1392:106:3743:-293.419,0,-81.9297	0/1:154:47,107:47:1675:107:3792:-295.12,0,-104.678	0/0:91:91,0:91:3268:0:0:0,-27.3937,-294.338	0/1:155:45,110:45:1616:110:3878:-302.545,0,-99.0704	0/1:149:46,103:46:1648:103:3658:-284.572,0,-103.755	0/1:123:34,89:34:1220:89:3171:-248.587,0,-73.0801	0/1:132:39,93:39:1387:93:3289:-256.495,0,-85.3906	0/1:127:46,81:46:1652:81:2843:-217.878,0,-110.738	0/1:109:33,76:33:1176:76:2679:-208.542,0,-73.3355	0/0:55:55,0:55:1964:0:0:0,-16.5566,-177.035	0/1:416:138,278:138:4933:278:9854:-761.572,0,-318.891	0/1:225:61,164:61:2180:164:5809:-455.188,0,-128.734	0/1:324:99,225:99:3556:225:7984:-620.424,0,-222.713	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/1:135:60,75:60:2152:75:2660:-199.006,0,-153.308	0/0:49:46,3:46:1636:3:108:0,-4.6753,-137.454	0/1:536:185,351:185:6624:351:12447:-958.718,0,-434.869	0/1:387:113,274:113:4044:274:9724:-758.611,0,-247.649	0/1:55:24,31:24:843:31:1085:-81.4001,0,-59.6313	0/1:579:199,380:199:7132:380:13489:-1039.51,0,-467.64	0/1:185:67,118:67:2400:118:4179:-320.603,0,-160.566	0/1:167:53,114:53:1904:114:4075:-316.665,0,-121.366	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:28:15,13:15:536:13:464:-33.6687,0,-40.146	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	1/1:11:0,11:0:0:11:383:-34.8032,-3.31133,0	0/1:21:2,19:2:72:19:671:-54.3908,0,-0.515092	0/1:425:137,288:137:4890:288:10154:-785.867,0,-312.315	0/1:360:158,202:158:5652:202:7139:-534.2,0,-400.203	0/1:105:32,73:32:1140:73:2603:-202.91,0,-71.3011	0/0:7:7,0:7:244:0:0:0,-2.10721,-22.2994	0/0:180:171,9:171:6120:9:320:0,-25.043,-521.756	0/1:57:11,46:11:396:46:1639:-130.639,0,-18.824	0/1:469:155,314:155:5533:314:11025:-850.976,0,-356.912	0/1:143:58,85:58:2076:85:3019:-228.895,0,-144.063	0/1:141:53,88:53:1908:88:3133:-239.75,0,-129.544	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/1:246:88,158:88:3145:158:5589:-429.082,0,-209.221	0/0:266:264,2:264:9454:2:57:0,-74.6607,-845.405	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.072	0/1:361:82,279:82:2936:279:9940:-785.854,0,-155.802	0/0:139:138,1:138:4952:1:36:0,-38.2449,-442.23	0/1:15:9,6:9:324:6:212:-14.9093,0,-24.9904	0/0:140:139,1:139:4971:1:36:0,-38.5459,-443.94	0/0:22:22,0:22:780:0:0:0,-6.62266,-70.523	0/1:21:7,14:7:248:14:495:-38.5614,0,-16.3426	0/1:288:79,209:79:2840:209:7398:-579.169,0,-169.141	0/1:22:11,11:11:396:11:388:-28.6323,0,-29.3601	0/1:23:7,16:7:252:16:576:-45.2513,0,-16.1053	0/1:24:4,20:4:144:20:716:-57.543,0,-6.0889	0/1:121:31,90:31:1112:90:3210:-252.693,0,-63.9667	0/1:211:63,148:63:2255:148:5278:-411.64,0,-139.695	0/0:22:22,0:22:780:0:0:0,-6.62266,-70.523	0/1:339:117,222:117:4200:222:7896:-608.621,0,-276.131	0/1:349:137,212:137:4888:212:7523:-572.056,0,-335.011	0/1:136:55,81:55:1957:81:2867:-217.329,0,-135.458	0/0:139:139,0:139:4973:0:0:0,-41.8432,-447.717	0/1:300:93,207:93:3344:207:7304:-567.099,0,-210.867	1/1:248:14,234:14:496:234:8326:-704.377,-29.6812,0	0/0:22:21,1:21:747:1:36:0,-3.02438,-63.956	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:134:55,79:55:1964:79:2794:-211.361,0,-136.697	0/1:17:4,13:4:144:13:453:-35.9821,0,-8.19611	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.131	0/1:116:24,92:24:864:92:3255:-258.228,0,-43.1631	0/0:136:135,1:135:4828:1:36:0,-37.3418,-431.077	0/0:235:235,0:235:8399:0:0:0,-70.742,-755.916	0/1:406:161,245:161:5776:245:8696:-660.419,0,-397.734	0/0:183:179,4:179:6411:4:140:0,-42.1439,-564.132	0/1:25:11,14:11:396:14:483:-36.2715,0,-28.457	0/0:203:200,3:200:7159:3:104:0,-51.4063,-634.663	0/1:295:135,160:135:4823:160:5620:-417.12,0,-345.422	0/0:220:217,3:217:7748:3:108:0,-56.1514,-687.28	0/1:160:52,108:52:1859:108:3851:-298.586,0,-119.267	0/0:69:68,1:68:2429:1:36:0,-17.1728,-215.266	0/1:173:66,107:66:2359:107:3776:-287.963,0,-160.49	0/0:215:207,8:207:7353:8:284:0,-38.8181,-635.917	0/1:68:27,41:27:968:41:1440:-109.423,0,-66.9673	0/1:155:51,104:51:1828:104:3693:-285.913,0,-118.141	0/0:93:92,1:92:3300:1:36:0,-24.3975,-293.62	0/1:71:17,54:17:612:54:1940:-153.503,0,-34.0403	0/1:154:39,115:39:1400:115:4067:-319.669,0,-79.9406	0/1:156:33,123:33:1188:123:4370:-346.516,0,-60.267	0/0:114:113,1:113:4047:1:36:0,-30.7191,-360.818	0/0:150:150,0:150:5374:0:0:0,-45.1545,-483.79
chr09	17503656	.	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chr09	17503672	.	G	C	62883.7	PASS	AB=0.510206;ABP=14.091;AC=59;AF=0.31383;AN=188;AO=6275;CIGAR=1X;DP=20401;DPB=20401;DPRA=1.14177;EPP=13620.3;EPPR=30627.3;GTI=0;LEN=1;MEANALT=1.125;MQM=22.1504;MQMR=43.3745;NS=94;NUMALT=1;ODDS=0.90165;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=220218;QR=497239;RO=14115;RPL=3018;RPP=22.7771;RPPR=186.125;RPR=3257;RUN=1;SAF=3019;SAP=22.4477;SAR=3256;SRF=6513;SRP=185.454;SRR=7602;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:137:75,62:75:2608:62:2175:-59.1061,0,-172.883	0/0:259:259,0:259:9132:0:0:0,-77.9668,-718.665	0/0:322:322,0:322:11395:0:0:0,-96.9317,-922.178	0/0:524:523,1:523:18469:1:36:0,-154.919,-1480.76	0/1:210:99,111:99:3497:111:3916:-167.626,0,-205.071	0/1:104:48,56:48:1711:56:1990:-57.1543,0,-106.687	0/0:226:224,2:224:7970:2:72:0,-62.6727,-635.056	0/1:360:197,163:197:6982:163:5747:-213.361,0,-436.059	0/1:257:129,128:129:4520:128:4459:-151.332,0,-291.414	0/1:227:100,127:100:3485:127:4458:-203.388,0,-204.176	0/1:143:66,77:66:2295:77:2683:-95.3158,0,-146.262	0/0:218:218,0:218:7458:0:0:0,-65.6245,-611.628	0/1:167:82,85:82:2902:85:2929:-86.8509,0,-184.325	0/1:167:86,81:86:3041:81:2758:-72.1774,0,-198.042	0/1:138:70,68:70:2461:68:2397:-92.9286,0,-157.364	0/1:141:64,77:64:2242:77:2662:-85.4525,0,-141.036	0/1:151:75,76:75:2638:76:2671:-97.6903,0,-158.966	0/1:128:74,54:74:2616:54:1911:-65.4057,0,-166.486	0/0:110:110,0:110:3848:0:0:0,-33.1133,-319.317	0/1:314:140,174:140:4975:174:6144:-268.066,0,-297.921	0/1:363:156,207:156:5531:207:7314:-272.788,0,-324.34	0/1:161:55,106:55:1930:106:3749:-180.283,0,-109.74	0/0:212:212,0:212:7498:0:0:0,-63.8184,-628.632	0/1:213:111,102:111:3922:102:3548:-137.448,0,-232.212	0/0:179:175,4:175:6163:4:144:0,-49.4503,-496.931	0/1:553:296,257:296:10433:257:9034:-411.05,0,-631.804	0/1:527:266,260:266:9433:260:9167:-310.055,0,-600.731	0/1:94:52,42:52:1846:42:1459:-45.7403,0,-115.344	0/1:483:275,208:275:9755:208:7345:-323.496,0,-636.816	0/1:207:101,106:101:3551:106:3714:-141.876,0,-213.438	0/1:291:141,150:141:5010:150:5315:-216.774,0,-321.116	0/0:23:23,0:23:803:0:0:0,-6.92369,-66.3014	0/1:45:26,19:26:927:19:665:-10.2459,0,-68.0936	0/0:11:11,0:11:353:0:0:0,-3.31133,-30.6659	0/1:20:6,14:6:212:14:496:-17.9909,0,-11.9793	0/1:21:12,9:12:432:9:308:-5.01047,0,-32.8996	0/1:470:225,245:225:7806:245:8527:-395.659,0,-478.663	0/1:283:112,171:112:3920:171:5998:-212.148,0,-225.993	0/1:134:61,73:61:2106:73:2535:-92.2041,0,-134.958	0/0:6:6,0:6:212:0:0:0,-1.80618,-17.2875	0/0:287:284,3:284:9945:3:108:0,-80.0111,-786.963	0/0:74:74,0:74:2596:0:0:0,-22.2762,-216.434	0/1:288:166,122:166:5874:122:4314:-98.078,0,-372.87	0/1:204:111,92:111:3904:92:3248:-129.237,0,-247.264	0/1:177:103,73:103:3621:73:2577:-104.615,0,-228.412	0/0:194:194,0:194:6828:0:0:0,-58.3998,-539.065	0/1:185:88,97:88:3106:97:3374:-118.757,0,-194.626	0/0:349:349,0:349:12331:0:0:0,-105.059,-989.003	0/0:241:241,0:241:8501:0:0:0,-72.5482,-661.217	0/1:353:162,190:162:5731:190:6656:-273.934,0,-352.719	0/0:328:328,0:328:11532:0:0:0,-98.7378,-889.007	0/1:19:5,14:5:180:14:464:-19.9204,0,-8.68744	0/0:354:352,2:352:12436:2:72:0,-102.936,-982.35	0/0:110:110,0:110:3912:0:0:0,-33.1133,-329.405	0/1:17:2,15:2:72:15:536:-23.2489,0,-0.980878	0/1:337:181,156:181:6372:156:5473:-172.951,0,-430.562	0/1:125:58,67:58:2059:67:2362:-95.6109,0,-123.31	0/1:15:8,7:8:288:7:237:-8.75611,0,-21.0428	0/1:31:12,19:12:428:19:667:-33.0036,0,-27.6059	0/1:226:122,104:122:4330:104:3583:-83.4909,0,-293.765	0/1:238:129,109:129:4504:109:3820:-131.465,0,-290.578	0/0:14:14,0:14:492:0:0:0,-4.21442,-39.3898	0/1:289:120,169:120:4258:169:5942:-279.222,0,-242.585	0/1:427:228,199:228:7975:199:6981:-288.787,0,-509.806	0/1:171:87,84:87:3050:84:2946:-116.124,0,-184.221	0/0:284:284,0:284:10077:0:0:0,-85.4925,-792.228	0/1:362:169,193:169:5950:193:6853:-276.675,0,-358.063	0/1:255:90,165:90:3179:165:5805:-201.393,0,-186.931	0/0:120:119,1:119:4180:1:32:0,-35.1261,-360.463	0/0:241:241,0:241:8514:0:0:0,-72.5482,-660.618	0/1:195:100,95:100:3461:95:3285:-154.569,0,-217.03	0/1:46:17,29:17:600:29:1029:-41.4217,0,-35.6705	0/0:219:218,1:218:7655:1:36:0,-64.9265,-639.474	0/1:203:119,83:119:4230:83:2948:-53.0267,0,-271.892	0/0:394:394,0:394:13918:0:0:0,-118.606,-1127.85	0/0:349:348,1:348:12374:1:36:0,-103.662,-971.651	0/1:244:93,151:93:3307:151:5383:-176.745,0,-201.228	0/0:312:311,1:311:10972:1:36:0,-91.1003,-879.072	0/1:40:23,17:23:804:17:600:-24.8112,0,-51.9017	0/0:287:287,0:287:10168:0:0:0,-86.3956,-810.741	0/1:277:134,143:134:4740:143:4972:-200.479,0,-291.673	0/0:421:414,3:414:14571:3:108:0,-117.896,-1139.15	0/0:195:195,0:195:6873:0:0:0,-58.7008,-529.098	0/0:176:175,1:175:6172:1:36:0,-51.4846,-496.641	0/1:211:104,107:104:3680:107:3790:-164.6,0,-221.385	0/0:392:387,4:387:13601:4:129:0,-111.396,-1061.85	0/1:82:43,39:43:1490:39:1357:-52.3199,0,-87.6322	0/1:167:88,79:88:3065:79:2725:-87.8125,0,-197.904	0/0:183:183,0:183:6389:0:0:0,-55.0885,-513.767	0/1:132:63,69:63:2182:69:2425:-59.4454,0,-139.347	0/1:232:108,124:108:3700:124:4337:-105.651,0,-247.995	0/1:191:60,130:60:2116:130:4546:-194.49,0,-114.89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chr09	17506859	.	C	T	186261	PASS	AB=0.513036;ABP=16.3711;AC=129;AF=0.68617;AN=188;AO=10519;CIGAR=1X;DP=14996;DPB=14996;DPRA=0;EPP=22844.7;EPPR=9594.42;GTI=0;LEN=1;MEANALT=1.3617;MQM=36.1513;MQMR=59.8033;NS=94;NUMALT=1;ODDS=14.3003;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=376031;QR=158203;RO=4429;RPL=10519;RPP=22844.7;RPPR=9603.1;RPR=0;RUN=1;SAF=0;SAP=22844.7;SAR=10519;SRF=1;SRP=9611.78;SRR=4428;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:20,31:20:720:31:1100:-77.2705,0,-49.7762	1/1:204:1,202:1:36:202:7225:-600.103,-57.858,0	1/1:243:2,240:2:72:240:8616:-712.807,-68.3171,0	1/1:485:4,480:4:144:480:17217:-1408.05,-134.803,0	0/1:153:53,99:53:1884:99:3552:-243.67,0,-123.722	0/1:77:24,53:24:860:53:1900:-135.854,0,-54.5425	1/1:215:2,213:2:68:213:7506:-617.734,-61.8825,0	0/1:193:105,88:105:3734:88:3144:-205.861,0,-276.267	0/1:150:50,100:50:1765:100:3591:-252.088,0,-113.977	0/1:134:65,69:65:2319:69:2468:-162.533,0,-168.632	0/1:59:37,22:37:1324:22:788:-47.6834,0,-101.701	1/1:97:0,97:0:0:97:3457:-288.052,-29.1999,0	0/1:90:40,50:40:1424:50:1785:-122.769,0,-101.365	0/1:91:49,42:49:1747:42:1500:-95.7521,0,-130.12	0/1:77:38,38:38:1355:38:1364:-86.2107,0,-99.0408	0/1:78:35,42:35:1256:42:1493:-100.201,0,-89.8353	0/1:106:64,41:64:2300:41:1457:-88.0343,0,-175.333	0/1:69:41,28:41:1464:28:1004:-62.5085,0,-111.285	1/1:37:0,36:0:0:36:1292:-108.059,-10.8371,0	0/1:323:151,170:151:5381:170:6100:-399.124,0,-386.592	0/1:209:100,109:100:3560:109:3893:-257.751,0,-257.695	0/1:197:103,94:103:3669:94:3357:-215.277,0,-271.11	1/1:115:5,110:5:180:110:3952:-307.979,-18.0664,0	0/1:184:83,101:83:2964:101:3613:-243.482,0,-211.604	1/1:146:1,145:1:36:145:5143:-419.148,-40.3521,0	0/1:521:259,262:259:9275:262:9347:-611.659,0,-677.88	0/1:309:146,163:146:5213:163:5754:-377.703,0,-376.29	0/1:54:25,29:25:900:29:1017:-67.7536,0,-65.0654	0/1:475:179,295:179:6373:295:10470:-717.31,0,-430.665	0/1:424:245,179:245:8783:179:6428:-397.993,0,-662.819	0/1:240:134,105:134:4765:105:3756:-238.616,0,-356.733	1/1:9:0,9:0:0:9:320:-26.8292,-2.70927,0	0/1:24:13,11:13:464:11:396:-25.8084,0,-34.8728	1/1:7:0,7:0:0:7:252:-21.4153,-2.10721,0	0/1:6:5,1:5:180:1:36:-1.53997,0,-14.7459	0/1:13:6,7:6:216:7:252:-16.9305,0,-15.8771	0/1:264:131,133:131:4688:133:4745:-311.585,0,-342.609	0/1:351:203,148:203:7255:148:5286:-331.186,0,-545.45	0/1:69:40,29:40:1427:29:1044:-66.898,0,-106.591	1/1:5:0,5:0:0:5:180:-15.1755,-1.50515,0	1/1:407:11,393:11:396:393:13965:-1115.08,-85.9697,0	1/1:49:0,48:0:0:48:1724:-139.067,-14.4494,0	0/1:215:112,103:112:4004:103:3676:-239.865,0,-295.829	0/1:102:43,57:43:1536:57:2044:-137.266,0,-108.097	0/1:84:38,43:38:1364:43:1528:-102.085,0,-98.3453	1/1:107:1,106:1:36:106:3793:-309.744,-29.5616,0	0/1:351:164,187:164:5868:187:6705:-454.482,0,-422.013	1/1:316:2,314:2:72:314:11245:-919.489,-88.2888,0	1/1:197:4,193:4:140:193:6909:-553.409,-46.3583,0	0/1:255:123,131:123:4404:131:4708:-310.625,0,-317.848	1/1:287:1,284:1:36:284:10143:-832.466,-82.5451,0	0/1:24:19,5:19:676:5:180:-7.95079,0,-53.9433	1/1:253:0,251:0:0:251:9001:-748.257,-75.5585,0	1/1:69:0,69:0:0:69:2480:-204.586,-20.7711,0	0/1:31:26,5:26:913:5:180:-5.9145,0,-72.9933	0/1:230:82,148:82:2932:148:5309:-367.135,0,-193.603	0/1:82:53,29:53:1900:29:1025:-60.4337,0,-146.593	0/1:17:8,9:8:288:9:324:-21.9774,0,-21.1499	0/1:14:8,6:8:288:6:216:-13.8281,0,-22.053	0/1:97:39,58:39:1396:58:2080:-140.814,0,-96.7392	0/1:183:87,93:87:3116:93:3321:-219.277,0,-226.15	1/1:8:0,8:0:0:8:280:-21.875,-2.40824,0	0/1:349:134,215:134:4800:215:7732:-530.621,0,-327.096	0/1:311:155,155:155:5551:155:5552:-360.211,0,-406.034	0/1:103:56,47:56:1993:47:1692:-108.566,0,-148.636	1/1:183:1,182:1:36:182:6475:-529.873,-53.5918,0	0/1:326:178,148:178:6342:148:5308:-340.218,0,-470.845	0/1:142:83,59:83:2949:59:2120:-132.35,0,-222.897	1/1:34:0,34:0:0:34:1209:-100.216,-10.235,0	1/1:91:1,90:1:36:90:3224:-264.219,-25.1149,0	0/1:95:39,55:39:1396:55:1957:-131.594,0,-97.3035	0/1:25:10,15:10:360:15:525:-36.1834,0,-25.2186	1/1:210:0,209:0:0:209:7412:-619.352,-62.9153,0	0/1:63:31,32:31:1116:32:1110:-74.6063,0,-80.6806	1/1:232:1,231:1:36:231:8272:-677.116,-66.2407,0	1/1:352:2,349:2:72:349:12536:-1024.27,-102.182,0	0/1:207:93,114:93:3328:114:4051:-274.954,0,-237.425	1/1:200:1,199:1:36:199:7135:-589.684,-56.6077,0	0/1:19:11,8:11:396:8:288:-18.7073,0,-30.2632	1/1:259:0,259:0:0:259:9300:-765.843,-77.9668,0	0/1:273:99,174:99:3533:174:6190:-432.484,0,-235.979	1/1:265:2,261:2:72:261:9356:-758.606,-74.623,0	1/1:144:0,142:0:0:142:5089:-418.125,-42.7463,0	1/1:82:0,79:0:0:79:2806:-232.182,-23.7814,0	0/1:93:55,37:55:1959:37:1314:-80.1897,0,-148.571	1/1:203:1,200:1:36:200:7188:-588.737,-57.2586,0	0/1:41:21,20:21:752:20:701:-46.8454,0,-55.664	0/1:107:54,52:54:1940:52:1868:-124.536,0,-142.632	1/1:97:0,96:0:0:96:3433:-287.178,-28.8989,0	0/1:53:23,29:23:819:29:1040:-70.1295,0,-58.047	0/1:77:32,45:32:1143:45:1612:-110.185,0,-79.9994	0/1:92:66,26:66:2336:26:936:-49.7316,0,-182.803	1/1:196:0,195:0:0:195:6988:-577.239,-58.7009,0	1/1:140:0,139:0:0:139:4976:-410.672,-41.8432,0
chr09	17517539	.	CAACAGT	TAATAGC,CAACAGC	186168	PASS	AB=0.525669,0.469096;ABP=110.142,158.298;AC=94,94;AF=0.5,0.5;AN=188;AO=9840,8781;CIGAR=1X2M1X2M1X,6M1X;DP=18719;DPB=18727.4;DPRA=0,0;EPP=21370.3,19053.3;EPPR=6.91895;GTI=0;LEN=7,1;MEANALT=2.93617,2.93617;MQM=22.2917,28.5258;MQMR=59.8;NS=94;NUMALT=2;ODDS=110.317;PAIRED=0,0;PAIREDR=0;PAO=26.5,2.5;PQA=860,39.5;PQR=21.5;PRO=2;QA=335938,313705;QR=162;RO=5;RPL=0,0;RPP=21370.3,19070.7;RPPR=13.8677;RPR=9840,8781;RUN=1,1;SAF=0,2;SAP=21370.3,19053.3;SAR=9840,8779;SRF=1;SRP=6.91895;SRR=4;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:80:0,35,45:0:0:35,45:1199,1590:-146.117,-97.1788,-86.6428,-49.1642,0,-35.6178	1/2:346:0,195,150:0:0:195,150:6680,5333:-595.392,-325.304,-266.603,-270.089,0,-224.934	1/2:277:0,156,121:0:0:156,121:5299,4342:-487.732,-264.534,-217.574,-223.222,0,-186.797	1/2:262:0,150,111:0:0:150,111:5109,3982:-518.684,-245.433,-200.278,-273.41,0,-239.996	1/2:139:0,64,74:0:0:64,74:2171,2656:-266.224,-164.853,-145.588,-101.333,0,-79.0572	1/2:103:0,57,45:0:0:57,45:1954,1592:-178.299,-98.7549,-81.5962,-79.5462,0,-65.9998	1/2:241:0,159,82:0:0:159,82:5374,2940:-468.813,-182.902,-135.038,-286.176,0,-261.492	1/2:328:0,167,159:0:0:167,159:5734,5707:-584.076,-351.376,-301.104,-232.715,0,-184.852	1/2:205:0,114,91:0:0:114,91:3836,3272:-355.241,-197.417,-163.1,-158.06,0,-130.666	1/2:216:0,121,94:0:0:121,94:4153,3368:-428.957,-207.978,-171.553,-220.953,0,-192.656	1/2:122:0,67,55:0:0:67,55:2349,1972:-242.669,-121.695,-101.526,-121.232,0,-104.675	1/2:156:0,78,78:0:0:78,78:2685,2780:-283.391,-173.129,-149.648,-110.22,0,-86.7394	1/2:145:0,71,74:0:0:71,74:2462,2632:-259.922,-161.6,-140.227,-98.5526,0,-76.2764	1/2:145:0,56,89:0:0:56,89:1912,3175:-282.202,-193.343,-176.485,-89.0938,0,-62.3021	1/2:204:0,95,107:0:0:95,107:3286,3832:-406.662,-236.388,-207.79,-170.269,0,-138.058	1/2:115:1,62,52:1:29:62,52:2137,1860:-210.298,-112.74,-96.3846,-95.5079,0,-82.1643	1/2:188:0,86,101:0:0:86,101:2973,3620:-340.528,-221.153,-195.264,-119.356,0,-88.9515	1/2:125:0,49,76:0:0:49,76:1690,2713:-231.705,-164.595,-149.845,-67.3299,0,-44.4517	1/2:86:0,53,33:0:0:53,33:1828,1180:-144.908,-73.12,-57.1654,-71.7423,0,-61.8083	1/2:389:0,199,190:0:0:199,190:6845,6816:-783.164,-421.696,-361.791,-361.726,0,-304.53	1/2:302:1,142,158:1:30:142,158:4820,5653:-565.262,-345.241,-304.894,-217.88,0,-172.716	1/2:287:0,179,107:0:0:179,107:6087,3809:-553.108,-230.038,-176.153,-323.106,0,-290.896	1/2:156:0,85,70:0:0:85,70:2908,2508:-310.54,-153.113,-127.526,-157.336,0,-136.264	1/2:203:0,121,80:0:0:121,80:4124,2868:-366.725,-177.639,-141.214,-189.127,0,-165.045	1/2:171:0,108,63:0:0:108,63:3680,2264:-304.859,-137.504,-104.993,-167.605,0,-148.64	1/2:642:0,331,309:0:0:331,309:11353,11017:-1259.08,-660.977,-561.336,-598.126,0,-505.108	1/2:357:0,167,186:0:0:167,186:5657,6652:-675.985,-410.681,-360.409,-265.23,0,-209.239	1/2:99:0,49,50:0:0:49,50:1701,1785:-187.56,-111.005,-96.2544,-76.7975,0,-61.746	1/2:556:0,354,200:0:0:354,200:12077,7146:-1073.48,-429.027,-322.462,-644.475,0,-584.269	1/2:167:0,83,83:0:0:83,83:2834,2975:-312.248,-183.392,-158.407,-128.928,0,-103.943	1/2:276:0,178,96:0:0:178,96:6029,3432:-535.142,-210.496,-156.913,-324.785,0,-295.886	1/2:12:0,7,5:0:0:7,5:235,180:-22.4695,-11.547,-9.43976,-11.1745,0,-9.66938	1/2:19:0,8,11:0:0:8,11:274,388:-36.3371,-23.8248,-21.4166,-12.7467,0,-9.43541	1/2:11:0,7,4:0:0:7,4:243,144:-18.6304,-9.07434,-6.96713,-9.80049,0,-8.59637	1/2:14:0,9,5:0:0:9,5:317,180:-23.7719,-11.2304,-8.52117,-12.7869,0,-11.2818	1/2:14:0,6,8:0:0:6,8:208,288:-26.4484,-18.1857,-16.3795,-8.49067,0,-6.08243	1/2:476:0,220,254:0:0:220,254:7577,9089:-946.792,-544.696,-478.469,-402.167,0,-325.705	1/2:429:0,270,157:0:0:270,157:9202,5588:-764.682,-344.081,-262.803,-420.68,0,-373.419	1/2:121:0,67,54:0:0:67,54:2294,1920:-210.762,-117.388,-97.2188,-93.6102,0,-77.3546	1/2:4:0,1,3:0:0:1,3:36,93:-7.82881,-6.26374,-5.96271,-1.78555,0,-0.882465	1/2:170:0,98,72:0:0:98,72:3327,2588:-310.693,-158.881,-129.38,-152.011,0,-130.337	1/2:68:0,32,36:0:0:32,36:1111,1288:-128.511,-78.3321,-68.6992,-50.4185,0,-39.5814	1/2:308:0,185,122:0:0:185,122:6293,4372:-557.825,-267.727,-212.036,-290.005,0,-253.279	1/2:196:0,71,124:0:0:71,124:2476,4434:-403.274,-274.457,-253.084,-128.828,0,-91.4999	1/2:158:0,77,81:0:0:77,81:2656,2892:-320.705,-180.794,-157.615,-140.169,0,-115.785	1/2:117:0,43,73:0:0:43,73:1480,2607:-234.52,-157.048,-144.104,-77.4908,0,-55.5156	1/2:298:2,148,145:2:72:148,145:5065,5139:-513.327,-310.01,-271.333,-197.985,0,-160.212	1/2:385:0,226,158:0:0:226,158:7665,5652:-751.133,-348.774,-280.742,-402.457,0,-354.894	1/2:253:0,139,110:0:0:139,110:4734,3924:-492.677,-243.727,-201.883,-249.033,0,-215.919	1/2:395:0,198,196:0:0:198,196:6747,6998:-791.913,-434.102,-374.498,-357.803,0,-298.801	1/2:284:0,146,138:0:0:146,138:4915,4912:-557.118,-295.032,-251.082,-262.057,0,-220.515	1/2:37:0,21,16:0:0:21,16:705,572:-73.2279,-36.001,-29.6794,-37.4864,0,-32.6699	1/2:308:0,165,142:0:0:165,142:5649,5077:-546.865,-310.768,-261.098,-236.115,0,-193.369	1/2:62:0,44,17: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chr09	17517551	.	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chr09	17602520	.	A	G	74033.6	PASS	AB=0.53974;ABP=125.202;AC=58;AF=0.308511;AN=188;AO=4823;CIGAR=1X;DP=14778;DPB=14778;DPRA=1.14604;EPP=10415.3;EPPR=21518.1;GTI=0;LEN=1;MEANALT=1.04615;MQM=35.3346;MQMR=39.024;NS=94;NUMALT=1;ODDS=2.18605;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=171505;QR=356139;RO=9952;RPL=2673;RPP=126.162;RPPR=45.6377;RPR=2150;RUN=1;SAF=2680;SAP=132.843;SAR=2143;SRF=5206;SRP=49.1803;SRR=4746;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:37,21:37:1319:21:739:-42.6752,0,-67.6775	0/0:134:134,0:134:4781:0:0:0,-40.338,-270.494	0/0:188:188,0:188:6756:0:0:0,-56.5936,-474.209	0/0:417:417,0:417:14911:0:0:0,-125.53,-1143.64	0/1:90:53,37:53:1891:37:1320:-57.625,0,-108.32	0/1:57:25,32:25:896:32:1152:-52.5031,0,-40.9494	0/0:172:172,0:172:6172:0:0:0,-51.7772,-375.637	0/1:230:111,119:111:3968:119:4244:-198.523,0,-183.412	0/1:195:94,101:94:3357:101:3607:-173.104,0,-138.188	0/0:219:219,0:219:7826:0:0:0,-65.9256,-510.282	0/1:113:45,68:45:1608:68:2385:-138.041,0,-77.5667	0/0:180:180,0:180:6408:0:0:0,-54.1854,-435.491	0/1:154:61,93:61:2184:93:3298:-189.662,0,-111.751	0/1:128:72,56:72:2558:56:2004:-90.6869,0,-123.747	0/1:156:84,72:84:3009:72:2567:-138.29,0,-162.122	0/1:96:41,55:41:1468:55:1942:-107.04,0,-75.6951	0/1:107:53,54:53:1893:54:1904:-72.8766,0,-82.5253	0/1:88:49,39:49:1756:39:1368:-65.5415,0,-82.9798	0/0:61:61,0:61:2184:0:0:0,-18.3628,-158.425	0/1:152:69,83:69:2480:83:2948:-128.679,0,-118.075	0/1:255:111,144:111:3992:144:5105:-241.932,0,-211.784	0/1:133:31,102:31:1107:102:3621:-190.663,0,-36.0687	0/0:96:96,0:96:3433:0:0:0,-28.8989,-215.555	0/1:69:49,20:49:1752:20:720:-19.622,0,-71.6893	0/0:106:106,0:106:3808:0:0:0,-31.9092,-275.513	0/1:565:266,299:266:9543:299:10673:-579.496,0,-488.397	0/1:338:160,178:160:5674:178:6338:-325.236,0,-290.593	0/1:77:25,52:25:887:52:1864:-93.7868,0,-33.3854	0/1:358:193,165:193:6917:165:5888:-346.142,0,-423.795	0/1:194:86,108:86:3080:108:3827:-187.225,0,-120.099	0/1:150:57,93:57:2044:93:3291:-169.771,0,-88.6343	0/0:7:7,0:7:252:0:0:0,-2.10721,-15.2267	0/1:10:4,6:4:144:6:216:-15.0652,0,-8.72458	0/0:7:7,0:7:248:0:0:0,-2.10721,-16.4187	0/1:7:4,3:4:144:3:108:-7.93686,0,-9.53679	0/1:13:2,11:2:72:11:392:-22.1737,0,-1.20859	0/1:400:198,202:198:7071:202:7182:-385.754,0,-380.744	0/1:175:95,80:95:3385:80:2834:-121.943,0,-161.61	0/1:99:55,44:55:1972:44:1558:-72.1912,0,-96.2148	0/0:8:8,0:8:284:0:0:0,-2.40824,-18.1163	0/0:207:200,7:200:7135:7:248:0,-45.5515,-486.327	0/0:51:51,0:51:1832:0:0:0,-15.3525,-123.503	0/1:174:71,103:71:2548:103:3666:-217.509,0,-151.375	0/1:160:90,70:90:3228:70:2508:-119.291,0,-175.769	0/1:150:79,70:79:2836:70:2497:-116.348,0,-144.849	0/0:174:174,0:174:6213:0:0:0,-52.3792,-421.123	0/1:224:92,132:92:3291:132:4684:-219.702,0,-165.543	0/0:263:261,2:261:9318:2:72:0,-72.3391,-662.572	0/0:178:178,0:178:6367:0:0:0,-53.5833,-436.629	0/1:203:92,111:92:3270:111:3967:-223.616,0,-171.965	0/0:90:90,0:90:3232:0:0:0,-27.0927,-238.845	0/1:10:6,4:6:216:4:144:-8.8978,0,-12.6231	0/0:168:168,0:168:6021:0:0:0,-50.573,-412.17	0/0:78:78,0:78:2800:0:0:0,-23.4803,-207.035	0/1:11:2,9:2:72:9:324:-11.3936,0,-1.81065	0/1:265:108,157:108:3852:157:5591:-368.744,0,-212.822	0/1:93:43,50:43:1540:50:1773:-86.2033,0,-78.1499	0/1:14:4,10:4:144:10:360:-23.5468,0,-4.03952	0/1:25:11,14:11:383:14:500:-26.9789,0,-18.6855	0/1:104:65,39:65:2328:39:1389:-61.4833,0,-127.202	0/1:227:102,125:102:3643:125:4427:-232.421,0,-195.26	0/0:9:9,0:9:309:0:0:0,-2.70927,-22.4537	0/1:432:194,237:194:6955:237:8454:-491.285,0,-371.93	0/1:343:122,221:122:4388:221:7866:-407.842,0,-183.907	0/1:110:39,71:39:1392:71:2533:-110.224,0,-54.5634	0/0:119:119,0:119:4257:0:0:0,-35.8226,-329.772	0/1:231:72,159:72:2580:159:5613:-307.858,0,-111.292	0/1:211:59,152:59:2120:152:5439:-347.435,0,-85.4595	0/0:69:69,0:69:2467:0:0:0,-20.7711,-191.383	0/0:122:122,0:122:4384:0:0:0,-36.7257,-293.854	0/1:162:91,71:91:3251:71:2540:-122.202,0,-179.278	0/1:48:24,24:24:860:24:856:-45.1073,0,-45.5037	0/0:124:124,0:124:4456:0:0:0,-37.3277,-315.017	0/1:189:82,107:82:2929:107:3756:-193.118,0,-139.912	0/0:228:228,0:228:8168:0:0:0,-68.6348,-471.147	0/0:383:383,0:383:13685:0:0:0,-115.294,-1074.85	0/1:131:82,49:82:2928:49:1756:-86.3304,0,-150.534	0/0:169:168,1:168:6027:1:36:0,-47.2848,-438.225	0/1:11:3,8:3:108:8:288:-16.3348,0,-1.70985	0/0:204:204,0:204:7304:0:0:0,-61.4101,-520.054	0/1:155:77,78:77:2756:78:2762:-150.32,0,-151.683	0/0:372:371,1:371:13273:1:36:0,-109.897,-887.974	0/0:168:165,2:165:5932:2:72:0,-46.6168,-371.322	0/0:159:159,0:159:5699:0:0:0,-47.8638,-406.813	0/1:149:74,75:74:2660:75:2657:-116.136,0,-122.911	0/0:299:298,1:298:10676:1:36:0,-87.9214,-731.083	0/1:72:41,31:41:1476:31:1091:-50.2129,0,-70.7232	0/1:140:63,77:63:2260:77:2734:-143.641,0,-104.553	0/0:155:155,0:155:5556:0:0:0,-46.6596,-368.753	0/1:77:45,32:45:1604:32:1144:-50.7491,0,-86.3756	0/1:155:80,75:80:2872:75:2665:-141.902,0,-161.019	0/1:165:55,110:55:1980:110:3890:-214.683,0,-83.8162	0/0:251:250,1:250:8921:1:36:0,-71.9628,-677.945	0/0:235:235,0:235:8403:0:0:0,-70.742,-596.487
chr09	18231462	.	A	G	38806.6	PASS	AB=0.323351;ABP=2591.47;AC=56;AF=0.297872;AN=188;AO=3101;CIGAR=1X;DP=19147;DPB=19147;DPRA=0.751209;EPP=6736.75;EPPR=34837.8;GTI=9;LEN=1;MEANALT=1.03279;MQM=56.3383;MQMR=58.5747;NS=94;NUMALT=1;ODDS=3.02956;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=110463;QR=573961;RO=16042;RPL=1;RPP=6728.06;RPPR=108.79;RPR=3100;RUN=1;SAF=1;SAP=6728.06;SAR=3100;SRF=8463;SRP=108.79;SRR=7579;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:137:84,53:84:3012:53:1900:-129.844,0,-229.853	0/0:295:294,0:294:10529:0:0:0,-88.5028,-946.532	0/0:334:334,0:334:11960:0:0:0,-100.544,-1075.15	0/0:461:457,3:457:16302:3:108:0,-128.761,-1455.6	0/1:139:81,58:81:2900:58:2067:-144.235,0,-219.049	0/1:80:60,20:60:2128:20:716:-40.5869,0,-167.374	0/0:285:285,0:285:10207:0:0:0,-85.7935,-917.975	0/1:372:251,121:251:8977:121:4323:-276.779,0,-695.627	0/1:223:127,96:127:4564:96:3425:-241.11,0,-343.507	0/0:281:281,0:281:10068:0:0:0,-84.5894,-904.626	0/1:101:62,39:62:2224:39:1392:-94.9223,0,-170.009	0/0:218:218,0:218:7761:0:0:0,-65.6245,-697.227	0/1:175:108,67:108:3855:67:2386:-161.932,0,-294.157	0/1:124:86,38:86:3047:38:1351:-84.3033,0,-236.617	0/1:161:96,65:96:3437:65:2317:-159.9,0,-260.9	0/1:118:76,42:76:2720:42:1504:-99.9798,0,-209.402	0/1:94:65,29:65:2332:29:1040:-65.5869,0,-181.72	0/1:87:69,18:69:2457:18:639:-31.5539,0,-195.153	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.16	0/1:478:331,147:331:11861:147:5246:-327.417,0,-923.118	0/0:407:407,0:407:14570:0:0:0,-122.519,-1309.7	0/1:148:79,69:79:2844:69:2435:-174.421,0,-211.615	0/0:203:202,1:202:7247:1:36:0,-57.5134,-647.89	0/1:208:148,60:148:5301:60:2135:-129.513,0,-414.288	0/0:220:220,0:220:7876:0:0:0,-66.2266,-707.508	0/1:511:385,126:385:13792:126:4472:-247.426,0,-1085.59	0/1:468:307,161:307:10970:161:5726:-372.868,0,-845.963	0/1:61:35,26:35:1256:26:909:-63.7064,0,-94.9578	0/1:510:379,131:379:13535:131:4675:-267.057,0,-1064.09	0/1:198:138,60:138:4931:60:2139:-132.882,0,-383.87	0/1:175:131,44:131:4695:44:1558:-87.7081,0,-369.889	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5471	0/1:31:16,15:16:576:15:536:-39.1527,0,-42.8214	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4089	0/1:11:8,3:8:288:3:108:-6.76102,0,-22.9386	0/1:21:7,14:7:252:14:504:-39.1611,0,-16.6981	0/1:323:222,101:222:7907:101:3620:-228.391,0,-614.131	0/0:372:372,0:372:13255:0:0:0,-111.983,-1191.56	0/1:97:57,40:57:2040:40:1427:-99.491,0,-154.564	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7365	0/0:352:349,3:349:12473:3:108:0,-95.8922,-1111.45	0/0:89:89,0:89:3188:0:0:0,-26.7917,-286.925	0/1:347:211,136:211:7576:136:4842:-331.036,0,-575.709	0/1:104:67,37:67:2408:37:1308:-86.463,0,-185.528	0/1:97:55,42:55:1972:42:1471:-103.345,0,-148.486	0/0:217:217,0:217:7707:0:0:0,-65.3235,-693.301	0/1:260:182,78:182:6522:78:2775:-171.513,0,-506.805	0/0:460:460,0:460:16434:0:0:0,-138.474,-1476.54	0/0:283:283,0:283:10146:0:0:0,-85.1915,-912.176	0/1:272:225,47:225:8038:47:1663:-67.877,0,-640.904	0/0:271:271,0:271:9700:0:0:0,-81.5791,-872.126	0/1:14:9,5:9:324:5:180:-12.3234,0,-25.2883	0/0:327:327,0:327:11740:0:0:0,-98.4368,-1055.58	0/0:96:96,0:96:3456:0:0:0,-28.8989,-311.235	0/1:19:8,11:8:284:11:392:-29.4478,0,-20.1779	0/1:216:162,54:162:5828:54:1906:-105.998,0,-459.309	0/1:75:43,32:43:1540:32:1148:-80.9798,0,-116.275	0/1:11:6,5:6:216:5:176:-12.8684,0,-16.4792	0/1:33:26,7:26:928:7:252:-13.0326,0,-73.8912	0/1:141:88,53:88:3121:53:1900:-127.398,0,-238.628	0/1:168:110,58:110:3956:58:2080:-136.462,0,-305.444	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6721	0/1:248:198,50:198:7074:50:1784:-86.0831,0,-561.431	0/1:408:285,123:285:10197:123:4403:-272.812,0,-794.507	0/1:125:86,39:86:3064:39:1395:-88.0954,0,-237.908	0/0:247:247,0:247:8857:0:0:0,-74.3544,-796.424	0/1:273:183,90:183:6553:90:3228:-208.2,0,-507.397	0/1:200:74,126:74:2641:126:4502:-343.068,0,-177.722	0/0:88:88,0:88:3148:0:0:0,-26.4906,-283.502	0/0:181:181,0:181:6452:0:0:0,-54.4864,-580.41	0/1:107:79,28:79:2832:28:999:-57.9882,0,-222.719	0/1:36:32,4:32:1148:4:129:-1.08293,0,-92.7513	0/0:239:237,1:237:8500:1:36:0,-68.3327,-760.319	0/1:175:132,43:132:4724:43:1525:-84.7463,0,-372.249	0/0:348:348,0:348:12467:0:0:0,-104.758,-1119.39	0/0:415:415,0:415:14877:0:0:0,-124.927,-1337.59	0/1:233:158,75:158:5652:75:2657:-168.66,0,-438.142	0/0:379:378,0:378:13535:0:0:0,-113.789,-1215.56	0/1:11:8,3:8:288:3:108:-6.69079,0,-22.9542	0/0:438:438,0:438:15647:0:0:0,-131.851,-1406.59	0/1:220:175,45:175:6218:45:1608:-78.708,0,-493.317	0/0:469:469,0:469:16756:0:0:0,-141.183,-1504.84	0/0:158:158,0:158:5652:0:0:0,-47.5627,-507.839	0/0:181:181,0:181:6491:0:0:0,-54.4864,-584.02	0/1:116:85,31:85:3048:31:1108:-64.9539,0,-239.552	0/0:326:321,5:321:11506:5:180:0,-81.5956,-1016.23	0/1:49:37,12:37:1328:12:423:-23.635,0,-104.979	0/1:139:96,43:96:3440:43:1522:-95.2995,0,-267.823	0/0:186:186,0:186:6674:0:0:0,-55.9916,-600.233	0/1:86:56,30:56:1991:30:1063:-69.7458,0,-153.474	0/1:179:111,68:111:3980:68:2395:-161.689,0,-304.223	0/1:137:67,70:67:2404:70:2503:-183.766,0,-175.342	0/0:387:387,0:387:13832:0:0:0,-116.499,-1243.75	0/0:263:263,0:263:9412:0:0:0,-79.1709,-846.562
chr09	18271224	.	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chr09	18640363	.	AAAG	TAAA,TAAG	173606	PASS	AB=0.481007,0.516474;ABP=17.9399,14.2432;AC=132,56;AF=0.702128,0.297872;AN=188;AO=5884,2474;CIGAR=1X2M1X,1X3M;DP=8385;DPB=8385;DPRA=0,0.959204;EPP=12780,5375.23;EPPR=0;GTI=0;LEN=4,1;MEANALT=1.94681,2.25397;MQM=53.3166,59.4964;MQMR=0;NS=94;NUMALT=2;ODDS=5.91338;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=206829,87858;QR=0;RO=0;RPL=5884,2474;RPP=12780,5375.23;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=12780,5375.23;SAR=5884,2474;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:76:0,33,43:0:0:33,43:1145,1526:-216.794,-124.652,-114.718,-92.49,0,-79.5457	1/1:89:0,89,0:0:0:89,0:3106,0:-276.681,-26.7917,0,-276.681,-26.7917,-276.681	1/1:145:0,145,0:0:0:145,0:5085,0:-452.651,-43.6494,0,-452.651,-43.6494,-452.651	1/1:169:0,166,1:0:0:166,1:5788,36:-519.804,-49.971,0,-516.866,-47.0091,-516.565	1/2:59:0,28,31:0:0:28,31:972,1100:-168.289,-89.9507,-81.5219,-78.6879,0,-69.3559	1/2:65:0,34,31:0:0:34,31:1186,1100:-184.991,-89.9646,-79.7296,-95.376,0,-86.0441	1/1:109:0,108,1:0:0:108,1:3781,36:-339.427,-32.5112,0,-336.49,-29.214,-336.189	1/2:162:0,83,78:0:0:83,78:2895,2750:-457.913,-223.683,-198.697,-234.335,0,-210.855	1/2:107:0,55,52:0:0:55,52:1930,1848:-307.292,-150.694,-134.137,-156.951,0,-141.297	1/1:77:0,73,4:0:0:73,4:2571,140:-230.563,-21.9752,0,-219.173,-10.2347,-217.968	1/2:59:0,27,32:0:0:27,32:951,1152:-171.437,-94.3478,-86.22,-77.4444,0,-67.8115	1/1:111:0,111,0:0:0:111,0:3886,0:-348.3,-33.4143,0,-348.3,-33.4143,-348.3	1/2:115:0,57,57:0:0:57,57:2016,2040:-328.426,-166.415,-149.256,-162.074,0,-144.915	1/2:71:0,29,42:0:0:29,42:1039,1512:-207.386,-123.718,-114.988,-84.0246,0,-71.3813	1/2:85:0,46,38:0:0:46,38:1644,1364:-245.117,-111.273,-97.4257,-133.855,0,-122.416	1/2:73:0,26,46:0:0:26,46:929,1648:-209.743,-134.38,-126.553,-75.3601,0,-61.5127	1/2:36:0,16,20:0:0:16,20:574,708:-104.38,-58.025,-53.2085,-46.7097,0,-40.6891	1/2:34:0,20,14:0:0:20,14:705,500:-97.7377,-41.1135,-35.0929,-56.9774,0,-52.763	1/1:51:0,51,0:0:0:51,0:1796,0:-160.861,-15.3525,0,-160.861,-15.3525,-160.861	1/2:112:0,55,56:0:0:55,56:1928,1961:-315.522,-159.532,-142.976,-155.979,0,-139.122	1/1:151:0,151,0:0:0:151,0:5316,0:-477.212,-45.4555,0,-477.212,-45.4555,-477.212	1/2:60:0,20,40:0:0:20,40:700,1420:-172.988,-116.053,-110.033,-57.2859,0,-45.2447	1/1:140:0,140,0:0:0:140,0:4986,0:-448.098,-42.1442,0,-448.098,-42.1442,-448.098	1/2:61:0,32,29:0:0:32,29:1128,1040:-176.598,-85.1707,-75.5377,-91.7826,0,-83.0527	1/1:81:0,79,0:0:0:79,0:2778,0:-248.876,-23.7814,0,-248.876,-23.7814,-248.876	1/2:192:0,99,93:0:0:99,93:3488,3304:-552.75,-269.308,-239.507,-283.795,0,-255.799	1/2:246:0,123,122:0:0:123,122:4320,4270:-697.861,-347.367,-310.341,-350.484,0,-313.759	1/2:27:0,17,10:0:0:17,10:609,360:-79.2769,-29.7294,-24.6118,-49.9064,0,-46.8961	1/2:201:0,107,94:0:0:107,94:3781,3324:-578.758,-271.08,-238.87,-308.031,0,-279.734	1/2:102:0,58,44:0:0:58,44:2053,1560:-294.026,-127.442,-109.982,-166.938,0,-153.693	1/2:98:0,41,56:0:0:41,56:1429,1988:-278.033,-162.046,-149.704,-116.056,0,-99.1978	1/1:4:0,3,0:0:0:3,0:108,0:-9.79232,-0.90309,0,-9.79232,-0.90309,-9.79232	1/2:32:0,19,13:0:0:19,13:679,460:-93.1002,-37.822,-32.1024,-55.6331,0,-51.7197	1/1:5:0,5,0:0:0:5,0:178,0:-16.145,-1.50515,0,-16.145,-1.50515,-16.145	1/2:16:0,8,8:0:0:8,8:288,288:-47.2929,-23.8592,-21.4509,-23.7931,0,-21.3849	1/2:27:0,11,16:0:0:11,16:383,576:-78.4069,-47.3421,-44.0308,-31.4171,0,-26.6006	1/2:180:0,87,93:0:0:87,93:3040,3294:-515.75,-268.676,-242.487,-247.425,0,-219.429	1/1:90:0,89,1:0:0:89,1:3133,21:-281.134,-26.7917,0,-279.554,-25.0012,-279.253	1/2:54:0,21,33:0:0:21,33:743,1180:-156.91,-96.5741,-90.2524,-60.691,0,-50.757	1/1:4:0,4,0:0:0:4,0:143,0:-13.2035,-1.20412,0,-13.2035,-1.20412,-13.2035	1/1:121:0,121,0:0:0:121,0:4253,0:-381.525,-36.4246,0,-381.525,-36.4246,-381.525	1/1:42:0,42,0:0:0:42,0:1473,0:-132.34,-12.6433,0,-132.34,-12.6433,-132.34	1/2:120:0,51,69:0:0:51,69:1783,2449:-344.403,-199.784,-184.431,-144.971,0,-124.2	1/2:54:0,28,26:0:0:28,26:992,928:-156.382,-76.0031,-67.5743,-80.7339,0,-72.9072	1/2:65:0,32,33:0:0:32,33:1133,1172:-187.746,-95.8489,-86.2159,-92.2505,0,-82.3165	1/1:89:0,89,0:0:0:89,0:3123,0:-280.785,-26.7917,0,-280.785,-26.7917,-280.785	1/2:95:0,51,44:0:0:51,44:1807,1560:-272.513,-127.402,-112.049,-145.463,0,-132.218	1/1:127:0,127,0:0:0:127,0:4481,0:-401.39,-38.2308,0,-401.39,-38.2308,-401.39	1/1:62:0,61,0:0:0:61,0:2134,0:-191.523,-18.3628,0,-191.523,-18.3628,-191.523	1/2:71:0,29,42:0:0:29,42:1025,1481:-204.283,-120.939,-112.209,-83.6965,0,-71.0533	1/1:65:0,65,0:0:0:65,0:2278,0:-205.001,-19.567,0,-205.001,-19.567,-205.001	1/2:7:0,3,4:0:0:3,4:107,144:-20.4467,-12.1071,-11.204,-8.68959,0,-7.48547	1/1:127:0,127,0:0:0:127,0:4448,0:-397.958,-38.2308,0,-397.958,-38.2308,-397.958	1/1:58:0,58,0:0:0:58,0:2055,0:-184.992,-17.4597,0,-184.992,-17.4597,-184.992	1/2:15:0,3,12:0:0:3,12:108,428:-44.007,-35.2464,-34.3434,-9.11818,0,-5.50582	1/2:128:0,74,54:0:0:74,54:2606,1909:-366.731,-155.435,-133.159,-211.647,0,-195.391	1/2:54:0,30,24:0:0:30,24:1033,856:-153.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chr09	18987313	.	A	G	235790	PASS	AB=0.574686;ABP=296.229;AC=66;AF=0.351064;AN=188;AO=11432;CIGAR=1X;DP=19353;DPB=19353;DPRA=1.97382;EPP=24827.3;EPPR=17183.7;GTI=16;LEN=1;MEANALT=1.10938;MQM=59.5947;MQMR=59.9767;NS=94;NUMALT=1;ODDS=1.21254;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=408465;QR=283360;RO=7912;RPL=0;RPP=24827.3;RPPR=17183.7;RPR=11432;RUN=1;SAF=11432;SAP=24827.3;SAR=0;SRF=7912;SRP=17183.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:32:32,0:32:1137:0:0:0,-9.63296,-102.637	0/0:127:127,0:127:4568:0:0:0,-38.2308,-411.283	0/0:179:179,0:179:6409:0:0:0,-53.8844,-576.896	0/0:268:267,0:267:9600:0:0:0,-80.375,-863.588	0/1:85:32,53:32:1152:53:1878:-143.699,0,-78.4026	0/1:85:55,30:55:1972:30:1072:-71.0064,0,-152.167	0/1:155:83,72:83:2984:72:2592:-186.642,0,-222.132	0/1:216:118,98:118:4225:98:3451:-245.762,0,-315.406	0/1:95:39,54:39:1396:54:1921:-144.801,0,-97.5836	0/0:127:127,0:127:4548:0:0:0,-38.2308,-409.486	0/1:318:49,269:49:1764:269:9613:-768.992,0,-63.3162	0/0:72:72,0:72:2562:0:0:0,-21.6742,-230.827	0/0:70:69,1:69:2465:1:36:0,-17.4738,-218.504	0/1:94:51,43:51:1832:43:1544:-110.956,0,-136.864	0/1:68:27,41:27:968:41:1457:-110.921,0,-66.9488	0/1:80:33,47:33:1169:47:1684:-127.751,0,-81.4329	0/1:89:45,44:45:1582:44:1584:-116.052,0,-115.867	0/1:64:35,29:35:1260:29:1044:-75.0007,0,-94.4396	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:247:100,147:100:3596:147:5265:-399.598,0,-249.491	0/0:168:168,0:168:6032:0:0:0,-50.573,-542.982	0/1:157:46,110:46:1656:110:3910:-304.716,0,-102.008	0/1:52:23,29:23:824:29:1040:-78.1309,0,-58.8298	0/1:103:56,47:56:2012:47:1688:-121.177,0,-150.347	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.203	0/1:312:136,176:136:4868:176:6289:-471.706,0,-344.346	0/1:190:85,105:85:3044:105:3738:-279.36,0,-216.989	0/1:31:19,12:19:684:12:432:-29.8893,0,-52.5584	0/1:331:138,193:138:4944:193:6924:-523.55,0,-345.469	0/0:194:194,0:194:6933:0:0:0,-58.3998,-624.036	0/1:151:85,65:85:3052:65:2332:-164.619,0,-229.394	0/1:9:8,1:8:288:1:36:-0.889005,0,-23.5581	1/1:747:10,737:10:360:737:26263:-2330.06,-192.125,0	1/1:1037:12,1025:12:424:1025:36587:-3252.47,-273.672,0	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	1/1:785:2,781:2:72:781:27909:-2503.58,-229.23,0	0/1:177:106,71:106:3801:71:2556:-176.988,0,-289.003	0/0:184:183,1:183:6542:1:36:0,-51.7912,-585.257	0/1:260:30,230:30:1065:230:8248:-663.979,0,-17.892	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:170:169,1:169:6076:1:36:0,-47.5768,-543.341	0/0:55:55,0:55:1976:0:0:0,-16.5566,-178.115	0/1:145:67,78:67:2408:78:2796:-208.231,0,-173.327	0/1:64:36,28:36:1296:28:996:-70.254,0,-97.678	0/1:52:25,27:25:900:27:968:-71.7652,0,-65.6675	0/0:128:128,0:128:4573:0:0:0,-38.5318,-411.735	0/1:150:91,59:91:3257:59:2120:-145.711,0,-248.194	0/0:170:169,1:169:6041:1:36:0,-47.5768,-540.195	0/0:144:144,0:144:5172:0:0:0,-43.3483,-465.618	0/1:186:95,91:95:3393:91:3253:-236.811,0,-249.592	0/0:228:228,0:228:8149:0:0:0,-68.6348,-733.425	1/1:930:12,917:12:432:917:32826:-2912.95,-240.796,0	0/0:190:190,0:190:6801:0:0:0,-57.1957,-612.144	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.937	1/1:819:8,810:8:288:810:28908:-2573.21,-220.335,0	0/0:216:216,0:216:7734:0:0:0,-65.0225,-696.08	0/1:30:5,25:5:176:25:900:-72.2901,0,-7.15412	1/1:650:7,643:7:248:643:22952:-2042.01,-173.005,0	1/1:733:15,718:15:540:718:25584:-2252.64,-171.718,0	0/1:117:62,55:62:2213:55:1965:-141.703,0,-164.212	0/1:127:71,56:71:2548:56:2000:-141.435,0,-191.34	1/1:676:1,675:1:36:675:24156:-2168.23,-199.898,0	0/1:187:131,56:131:4681:56:1997:-123.682,0,-365.157	0/0:257:256,1:256:9150:1:36:0,-73.7664,-819.802	0/1:96:40,56:40:1432:56:2000:-151.366,0,-100.279	0/0:114:114,0:114:4076:0:0:0,-34.3174,-367.024	0/1:145:79,66:79:2825:66:2343:-167.472,0,-210.832	0/0:132:127,5:127:4548:5:180:0,-23.1839,-392.934	0/1:35:31,4:31:1082:4:144:-2.77757,0,-87.1486	0/0:97:97,0:97:3472:0:0:0,-29.1999,-312.692	0/1:89:46,43:46:1648:43:1544:-112.437,0,-121.817	1/1:650:17,633:17:612:633:22597:-1975.18,-140.256,0	0/0:124:124,0:124:4441:0:0:0,-37.3277,-399.851	0/1:85:51,34:51:1836:34:1197:-82.4459,0,-139.933	0/0:199:199,0:199:7125:0:0:0,-59.905,-641.29	0/0:233:233,0:233:8338:0:0:0,-70.14,-750.424	0/1:180:78,102:78:2800:102:3664:-275.733,0,-198.054	0/0:168:168,0:168:5961:0:0:0,-50.573,-536.594	1/1:661:16,645:16:572:645:23057:-2022.1,-147.167,0	0/0:166:164,2:164:5881:2:72:0,-43.1391,-522.565	0/1:139:65,74:65:2328:74:2656:-197.426,0,-167.919	0/0:205:204,1:204:7298:1:36:0,-58.1197,-653.27	0/0:93:93,0:93:3344:0:0:0,-27.9958,-301.176	0/0:88:88,0:88:3164:0:0:0,-26.4906,-284.984	0/1:83:44,39:44:1580:39:1400:-100.45,0,-117.506	0/0:156:155,1:155:5542:1:36:0,-43.3624,-495.299	0/1:39:24,15:24:864:15:540:-37.1964,0,-66.3424	0/1:77:45,32:45:1616:32:1148:-80.4505,0,-122.551	0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.701	1/1:389:33,356:33:1188:356:12763:-1040.99,-9.87208,0	0/1:576:54,522:54:1940:522:18664:-1505.2,0,-1.35323	0/1:81:31,50:31:1112:50:1766:-134.824,0,-76.0079	0/0:118:118,0:118:4244:0:0:0,-35.5215,-382.137	0/0:85:85,0:85:3041:0:0:0,-25.5875,-273.912
chr09	19530904	.	ATA	ATG,GTG	148691	PASS	AB=0.644128,0.354093;ABP=408.62,418.697;AC=148,40;AF=0.787234,0.212766;AN=188;AO=4792,825;CIGAR=2M1X,1X1M1X;DP=5635;DPB=5635;DPRA=0,1.1217;EPP=909.027,1700.2;EPPR=11.6962;GTI=6;LEN=1,3;MEANALT=1.70213,2.13208;MQM=59.4508,54.1442;MQMR=60;NS=94;NUMALT=2;ODDS=1.37721;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=170557,29198;QR=144;RO=4;RPL=4777,818;RPP=10278.8,1734.19;RPPR=11.6962;RPR=15,7;RUN=1,1;SAF=3088,4;SAP=870.99,1759.9;SAR=1704,821;SRF=4;SRP=11.6962;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:24:0,24,0:0:0:24,0:861,0:-77.7645,-7.22472,0,-77.7645,-7.22472,-77.7645	1/1:30:0,30,0:0:0:30,0:1080,0:-97.5026,-9.0309,0,-97.5026,-9.0309,-97.5026	1/1:58:0,58,0:0:0:58,0:2084,0:-187.622,-17.4597,0,-187.622,-17.4597,-187.622	1/1:41:0,41,0:0:0:41,0:1472,0:-132.776,-12.3422,0,-132.776,-12.3422,-132.776	1/1:19:0,19,0:0:0:19,0:684,0:-61.8857,-5.71957,0,-61.8857,-5.71957,-61.8857	1/2:12:0,9,3:0:0:9,3:305,106:-33.4906,-8.7719,-6.06263,-25.0625,0,-24.1594	1/2:30:0,27,3:0:0:27,3:959,106:-87.1194,-8.97729,-0.84948,-78.4952,0,-77.5921	1/1:26:0,25,1:0:0:25,1:878,36:-78.9393,-7.52575,0,-76.0097,-4.23755,-75.7087	1/2:28:0,23,5:0:0:23,5:816,180:-80.994,-14.8198,-7.89611,-66.5288,0,-65.0237	1/1:31:0,31,0:0:0:31,0:1097,0:-99.0218,-9.33193,0,-99.0218,-9.33193,-99.0218	1/2:100:0,88,12:0:0:88,12:3143,417:-290.465,-34.2255,-7.73488,-256.587,0,-252.975	1/1:115:1,114,0:1:36:114,0:4035,0:-359.499,-31.0202,0,-359.8,-34.3174,-362.737	1/2:74:0,48,26:0:0:48,26:1720,930:-216.266,-75.9885,-61.539,-140.635,0,-132.808	1/2:57:0,46,11:0:0:46,11:1648,392:-166.428,-32.053,-18.2056,-134.729,0,-131.418	1/2:49:0,33,16:0:0:33,16:1184,576:-143.785,-47.2285,-37.2945,-96.915,0,-92.0985	1/2:50:0,36,14:0:0:36,14:1288,500:-145.819,-40.9195,-30.0824,-105.255,0,-101.041	1/2:44:0,26,17:0:0:26,17:932,602:-124.506,-48.5155,-40.6888,-75.9854,0,-70.8679	1/2:33:0,23,10:0:0:23,10:824,360:-96.8445,-29.6517,-22.728,-67.5514,0,-64.5411	1/1:105:0,105,0:0:0:105,0:3701,0:-333.252,-31.6082,0,-333.252,-31.6082,-333.252	1/2:46:0,25,21:0:0:25,21:896,743:-132.585,-59.6,-52.0742,-73.3365,0,-67.0149	1/1:57:0,57,0:0:0:57,0:2024,0:-182.415,-17.1587,0,-182.415,-17.1587,-182.415	1/2:17:0,5,12:0:0:5,12:180,416:-48.7671,-34.0767,-32.5716,-15.046,0,-11.4336	1/1:38:0,37,0:0:0:37,0:1320,0:-118.798,-11.1381,0,-118.798,-11.1381,-118.798	1/2:22:0,13,9:0:0:13,9:468,312:-63.8596,-25.665,-21.7516,-38.5463,0,-35.837	1/1:32:0,31,0:0:0:31,0:1105,0:-99.3951,-9.33193,0,-99.3951,-9.33193,-99.3951	1/2:70:0,41,28:0:0:41,28:1454,984:-198.638,-80.1759,-67.8336,-118.583,0,-110.154	1/2:47:0,27,20:0:0:27,20:934,693:-132.377,-56.4809,-48.3531,-76.2414,0,-70.2208	1/2:33:0,23,10:0:0:23,10:828,356:-96.7273,-29.1623,-22.2387,-67.9204,0,-64.9101	1/2:66:0,21,45:0:0:21,45:752,1599:-191.886,-130.559,-124.238,-61.6837,0,-48.1374	1/1:30:0,30,0:0:0:30,0:1056,0:-95.2548,-9.0309,0,-95.2548,-9.0309,-95.2548	1/2:39:0,14,25:0:0:14,25:477,880:-110.444,-71.7493,-67.5349,-39.0387,0,-31.513	1/1:131:0,131,0:0:0:131,0:4676,0:-420.959,-39.4349,0,-420.959,-39.4349,-420.959	1/1:64:0,64,0:0:0:64,0:2275,0:-204.992,-19.2659,0,-204.992,-19.2659,-204.992	1/1:155:0,155,0:0:0:155,0:5515,0:-496.369,-46.6597,0,-496.369,-46.6597,-496.369	1/1:292:2,288,1:2:72:288,1:10252,28:-915.514,-80.7893,0,-913.899,-84.495,-919.473	1/1:104:0,100,4:0:0:100,4:3568,141:-320.924,-30.103,0,-309.472,-18.2995,-308.268	1/2:157:0,87,70:0:0:87,70:3123,2506:-459.193,-204.46,-178.27,-255.092,0,-234.02	1/1:27:0,27,0:0:0:27,0:957,0:-86.3546,-8.12781,0,-86.3546,-8.12781,-86.3546	1/2:132:0,115,17:0:0:115,17:4076,610:-381.697,-49.7908,-15.1723,-332.263,0,-327.145	1/1:81:0,81,0:0:0:81,0:2883,0:-259.693,-24.3834,0,-259.693,-24.3834,-259.693	1/1:31:0,31,0:0:0:31,0:1088,0:-98.2259,-9.33193,0,-98.2259,-9.33193,-98.2259	1/1:81:0,80,1:0:0:80,1:2837,34:-255.063,-24.0824,0,-252.392,-21.0807,-252.091	1/2:28:0,17,11:0:0:17,11:604,390:-81.2913,-32.0818,-26.9643,-49.5639,0,-46.2525	1/2:50:0,32,18:0:0:32,18:1152,646:-146.997,-53.001,-43.368,-94.3548,0,-88.9363	1/2:59:0,32,27:0:0:32,27:1144,952:-171.006,-77.7238,-68.0909,-93.6366,0,-85.5087	1/1:30:0,30,0:0:0:30,0:1072,0:-96.7892,-9.0309,0,-96.7892,-9.0309,-96.7892	1/2:17:0,12,5:0:0:12,5:432,170:-49.2352,-13.9697,-10.3573,-35.6088,0,-34.1037	1/1:59:0,59,0:0:0:59,0:2108,0:-189.984,-17.7608,0,-189.984,-17.7608,-189.984	1/1:16:0,16,0:0:0:16,0:568,0:-51.4519,-4.81648,0,-51.4519,-4.81648,-51.4519	1/2:55:0,25,30:0:0:25,30:896,1066:-160.222,-87.1444,-79.6187,-73.4346,0,-64.4037	1/1:25:0,25,0:0:0:25,0:891,0:-80.506,-7.52575,0,-80.506,-7.52575,-80.506	1/1:86:0,81,4:0:0:81,4:2884,142:-259.087,-24.3834,0,-247.609,-12.8075,-246.405	1/1:21:0,20,1:0:0:20,1:712,36:-64.0369,-6.0206,0,-61.1074,-2.7324,-60.8064	1/1:32:0,31,0:0:0:31,0:1103,0:-99.3246,-9.33193,0,-99.3246,-9.33193,-99.3246	1/1:37:0,35,0:0:0:35,0:1239,0:-111.4,-10.5361,0,-111.4,-10.5361,-111.4	1/1:37:0,36,1:0:0:36,1:1292,36:-116.224,-10.8371,0,-113.291,-7.54494,-112.99	1/2:20:0,14,6:0:0:14,6:500,198:-57.1083,-16.3263,-12.1119,-41.1199,0,-39.3137	1/1:79:0,76,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chr09	19806061	.	T	C	125955	PASS	AB=0.486573;ABP=21.2045;AC=54;AF=0.287234;AN=188;AO=5680;CIGAR=1X;DP=21235;DPB=21235;DPRA=1.02887;EPP=12337;EPPR=33771.6;GTI=1;LEN=1;MEANALT=1.06154;MQM=59.9898;MQMR=59.9965;NS=94;NUMALT=1;ODDS=3.50657;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199779;QR=553638;RO=15551;RPL=3097;RPP=104.013;RPPR=119.406;RPR=2583;RUN=1;SAF=3097;SAP=104.013;SAR=2583;SRF=8232;SRP=119.406;SRR=7319;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:112:112,0:112:4004:0:0:0,-33.7154,-360.55	0/0:307:307,0:307:10922:0:0:0,-92.4162,-982.878	0/0:452:452,0:452:16105:0:0:0,-136.066,-1449.13	0/0:462:460,1:460:16366:1:36:0,-135.516,-1469.04	0/1:172:84,87:84:2995:87:3090:-226.494,0,-217.946	0/1:135:65,70:65:2328:70:2462:-181.191,0,-169.141	0/1:398:210,188:210:7475:188:6581:-472.57,0,-552.986	0/1:277:149,128:149:5286:128:4499:-321.695,0,-392.492	0/1:172:86,86:86:3050:86:3055:-223.403,0,-222.953	0/0:190:190,0:190:6739:0:0:0,-57.1957,-606.587	0/1:225:112,113:112:3966:113:3951:-288.053,0,-289.402	0/0:254:253,1:253:8964:1:36:0,-72.8633,-803.151	0/1:214:120,94:120:4243:94:3292:-232.081,0,-317.631	0/1:283:132,151:132:4703:151:5246:-387.099,0,-338.24	0/1:153:77,76:77:2720:76:2645:-192.236,0,-198.985	0/1:179:105,74:105:3747:74:2581:-178.657,0,-283.546	0/1:227:121,106:121:4289:106:3737:-268.01,0,-317.848	0/1:169:84,85:84:2976:85:2986:-218.098,0,-217.198	0/0:152:152,0:152:5431:0:0:0,-45.7566,-488.92	0/1:493:245,248:245:8767:248:8831:-646.37,0,-640.611	0/0:363:361,1:361:12909:1:36:0,-105.734,-1158.03	0/1:171:68,103:68:2440:103:3659:-278.037,0,-168.379	0/0:113:113,0:113:4020:0:0:0,-34.0164,-361.989	0/1:292:195,97:195:6964:97:3463:-223.982,0,-538.927	0/0:128:128,0:128:4569:0:0:0,-38.5318,-411.375	0/1:585:305,280:305:10902:280:9884:-713.41,0,-804.975	0/1:457:243,214:243:8625:214:7540:-541.079,0,-638.681	0/1:70:41,29:41:1463:29:1001:-69.3257,0,-110.893	0/1:590:294,296:294:10413:296:10470:-764.615,0,-759.487	0/1:269:117,152:117:4178:152:5374:-402.819,0,-295.225	0/1:217:121,96:121:4328:96:3389:-239.901,0,-324.373	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:27:23,4:23:809:4:144:-5.18581,0,-65.0005	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:17:13,4:13:468:4:140:-7.82707,0,-37.3421	0/1:23:12,11:12:423:11:392:-28.6261,0,-31.4814	0/1:456:242,214:242:8651:214:7464:-534.549,0,-641.315	0/0:248:248,0:248:8786:0:0:0,-74.6554,-790.735	0/1:202:107,95:107:3823:95:3324:-238.571,0,-283.459	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:311:304,7:304:10843:7:248:0,-70.9561,-953.11	0/0:108:108,0:108:3837:0:0:0,-32.5112,-345.525	0/1:355:163,192:163:5806:192:6788:-504.133,0,-415.79	0/1:219:117,102:117:4179:102:3588:-257.204,0,-310.367	0/1:161:94,67:94:3352:67:2384:-166.352,0,-253.432	0/0:193:193,0:193:6889:0:0:0,-58.0988,-620.079	0/1:202:109,93:109:3883:93:3315:-237.761,0,-288.858	0/0:309:309,0:309:10964:0:0:0,-93.0183,-986.667	0/0:248:248,0:248:8860:0:0:0,-74.6554,-797.381	0/1:342:175,167:175:6239:167:5868:-425.281,0,-458.653	0/0:428:428,0:428:15276:0:0:0,-128.841,-1374.56	0/1:12:7,5:7:252:5:172:-12.2056,0,-19.4166	0/0:257:257,0:257:9188:0:0:0,-77.3647,-826.893	0/0:113:113,0:113:4027:0:0:0,-34.0164,-362.62	0/1:41:25,16:25:892:16:565:-38.8378,0,-68.2575	0/0:236:235,1:235:8383:1:36:0,-67.4448,-750.881	0/1:139:69,70:69:2472:70:2427:-176.841,0,-180.891	0/1:11:2,9:2:72:9:324:-26.1945,0,-3.52539	0/1:19:9,10:9:320:10:351:-26.2071,0,-23.4228	0/1:161:75,86:75:2672:86:3024:-223.924,0,-192.258	0/1:320:164,156:164:5843:156:5453:-394.581,0,-429.655	0/1:13:4,9:4:144:9:316:-24.8655,0,-9.40023	0/1:426:225,201:225:8035:201:7102:-511.006,0,-594.931	0/0:425:418,6:418:14865:6:212:0,-108.571,-1318.16	0/1:94:41,53:41:1443:53:1887:-141.811,0,-101.868	0/0:170:170,0:170:6080:0:0:0,-51.1751,-547.303	0/1:356:171,185:171:6072:185:6519:-479.632,0,-439.42	0/0:238:238,0:238:8458:0:0:0,-71.6451,-761.224	0/0:95:94,1:94:3343:1:36:0,-24.9996,-297.49	0/0:297:297,0:297:10586:0:0:0,-89.4059,-952.656	0/1:217:112,105:112:3992:105:3713:-269.05,0,-294.148	0/1:44:21,23:21:752:23:816:-60.5164,0,-54.7609	0/0:247:247,0:247:8763:0:0:0,-74.3544,-788.665	0/1:203:106,97:106:3787:97:3340:-239.71,0,-279.919	0/0:335:335,0:335:11916:0:0:0,-100.845,-1072.3	0/0:375:375,0:375:13397:0:0:0,-112.886,-1205.53	0/1:273:125,148:125:4444:148:5259:-391.268,0,-317.95	0/0:266:265,1:265:9428:1:32:0,-76.8747,-845.288	0/1:21:8,13:8:288:13:449:-34.4159,0,-19.9458	0/0:306:304,2:304:10838:2:72:0,-85.2785,-968.488	0/1:295:159,136:159:5639:136:4753:-339.125,0,-418.83	0/0:428:428,0:428:15300:0:0:0,-128.841,-1376.72	0/0:243:243,0:243:8621:0:0:0,-73.1503,-775.889	0/0:182:181,1:181:6422:1:36:0,-51.1892,-574.473	0/1:233:126,107:126:4453:107:3790:-271.161,0,-330.802	0/0:294:289,5:289:10278:5:170:0,-72.8686,-909.232	0/1:73:36,37:36:1280:37:1280:-93.5226,0,-93.528	0/1:191:96,95:96:3397:95:3328:-242.243,0,-248.449	0/0:221:221,0:221:7814:0:0:0,-66.5276,-703.299	0/1:203:104,99:104:3648:99:3426:-247.448,0,-267.417	0/1:284:156,128:156:5534:128:4409:-311.491,0,-412.695	0/1:237:94,143:94:3333:143:4983:-377.282,0,-228.844	0/0:254:254,0:254:9012:0:0:0,-76.461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chr09	19809436	.	C	T	33230.2	PASS	AB=0.48584;ABP=10.1439;AC=55;AF=0.292553;AN=188;AO=2000;CIGAR=1X;DP=7611;DPB=7611;DPRA=1.02159;EPP=4345.96;EPPR=12187.1;GTI=1;LEN=1;MEANALT=1;MQM=59.8395;MQMR=59.977;NS=94;NUMALT=1;ODDS=5.0927;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71594;QR=200361;RO=5611;RPL=2000;RPP=4345.96;RPPR=12187.1;RPR=0;RUN=1;SAF=0;SAP=4345.96;SAR=2000;SRF=0;SRP=12187.1;SRR=5611;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/0:122:122,0:122:4365:0:0:0,-36.7257,-393.022	0/0:59:59,0:59:2093:0:0:0,-17.7608,-188.638	0/0:146:146,0:146:5208:0:0:0,-43.9504,-468.861	0/1:58:27,31:27:957:31:1111:-82.8394,0,-68.9841	0/1:52:35,17:35:1245:17:608:-39.3985,0,-96.6992	0/1:83:39,44:39:1396:44:1580:-117.505,0,-100.954	0/1:151:94,57:94:3342:57:2040:-138.413,0,-255.54	0/1:48:25,23:25:892:23:809:-58.6789,0,-66.1501	0/0:130:130,0:130:4660:0:0:0,-39.1339,-419.561	0/1:76:33,43:33:1180:43:1544:-116.375,0,-83.6298	0/0:79:79,0:79:2824:0:0:0,-23.7814,-254.399	0/1:88:43,45:43:1529:45:1616:-119.222,0,-111.41	0/1:82:41,41:41:1468:41:1472:-108.084,0,-107.732	0/1:65:36,29:36:1281:29:1044:-74.7075,0,-96.0243	0/1:54:27,27:27:964:27:972:-71.5423,0,-70.8212	0/1:67:38,29:38:1349:29:1040:-73.7387,0,-101.539	0/1:55:29,26:29:1044:26:936:-68.0028,0,-77.7182	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.637	0/1:149:92,57:92:3270:57:2048:-139.733,0,-249.662	0/0:107:107,0:107:3840:0:0:0,-32.2102,-345.795	0/1:80:18,62:18:648:62:2194:-173.454,0,-34.5686	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/1:94:52,42:52:1860:42:1508:-107.716,0,-139.383	0/0:44:44,0:44:1560:0:0:0,-13.2453,-140.692	0/1:229:138,91:138:4898:91:3261:-224.766,0,-372.036	0/1:159:73,86:73:2600:86:3073:-228.913,0,-186.385	0/1:27:14,13:14:496:13:460:-33.6076,0,-36.8465	0/1:100:58,42:58:2068:42:1504:-105.552,0,-156.288	0/1:112:55,57:55:1964:57:2048:-150.869,0,-143.319	0/1:106:60,46:60:2148:46:1656:-117.405,0,-161.678	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:15:4,11:4:144:11:388:-30.7395,0,-8.79817	0/1:222:100,122:100:3584:122:4361:-325.778,0,-255.938	0/0:130:130,0:130:4633:0:0:0,-39.1339,-417.132	0/1:65:25,40:25:900:40:1440:-110.324,0,-61.7541	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:119:118,1:118:4221:1:36:0,-32.2243,-376.47	0/0:49:49,0:49:1741:0:0:0,-14.7505,-156.972	0/1:93:51,42:51:1820:42:1508:-108.019,0,-136.084	0/1:79:34,45:34:1224:45:1616:-121.948,0,-86.6857	0/1:72:38,34:38:1349:34:1220:-88.4314,0,-100.028	0/0:59:59,0:59:2100:0:0:0,-17.7608,-189.27	0/1:129:57,72:57:2036:72:2574:-193.069,0,-144.644	0/0:112:112,0:112:4005:0:0:0,-33.7154,-360.638	0/0:100:100,0:100:3572:0:0:0,-30.103,-321.688	0/1:156:92,64:92:3284:64:2285:-158.946,0,-248.82	0/0:134:134,0:134:4758:0:0:0,-40.338,-428.007	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:151:151,0:151:5424:0:0:0,-45.4555,-488.287	0/0:22:22,0:22:769:0:0:0,-6.62266,-69.5286	0/1:23:18,5:18:640:5:180:-9.62837,0,-51.0056	0/0:109:109,0:109:3851:0:0:0,-32.8123,-346.785	0/1:22:10,12:10:356:12:432:-32.5981,0,-25.7586	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	0/1:35:14,21:14:504:21:741:-56.4755,0,-35.162	0/1:116:45,71:45:1612:71:2544:-194.254,0,-110.451	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:152:83,69:83:2965:69:2442:-174.27,0,-221.195	0/0:181:181,0:181:6472:0:0:0,-54.4864,-582.567	0/1:65:40,25:40:1424:25:889:-60.76,0,-108.891	0/0:65:65,0:65:2309:0:0:0,-19.5669,-208.069	0/1:101:55,46:55:1956:46:1644:-117.844,0,-145.912	0/0:62:62,0:62:2220:0:0:0,-18.6639,-200.064	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/0:93:93,0:93:3325:0:0:0,-27.9958,-299.466	0/1:93:61,32:61:2196:32:1152:-75.9944,0,-169.909	0/1:14:10,4:10:356:4:144:-9.0992,0,-28.1668	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.073	0/1:76:27,49:27:972:49:1730:-133.102,0,-64.9196	0/0:153:153,0:153:5450:0:0:0,-46.0576,-490.628	0/0:109:109,0:109:3896:0:0:0,-32.8123,-350.834	0/1:87:47,40:47:1673:40:1432:-102.988,0,-124.666	0/0:146:145,1:145:5189:1:36:0,-40.3521,-463.55	0/1:10:4,6:4:140:6:216:-16.7802,0,-9.93428	0/0:89:88,1:88:3141:1:36:0,-23.1934,-279.316	0/1:84:45,39:45:1612:39:1400:-100.987,0,-120.084	0/0:218:217,1:217:7773:1:36:0,-62.0263,-696	0/0:86:86,0:86:3077:0:0:0,-25.8886,-277.157	0/0:67:67,0:67:2389:0:0:0,-20.169,-215.266	0/1:77:45,32:45:1608:32:1152:-80.8085,0,-121.831	0/0:142:141,1:141:5033:1:36:0,-39.148,-449.518	0/1:40:19,21:19:680:21:756:-56.326,0,-49.488	0/1:77:45,32:45:1604:32:1152:-80.8002,0,-121.471	0/0:72:72,0:72:2553:0:0:0,-21.6742,-230.02	0/1:39:19,20:19:680:20:720:-53.3886,0,-49.789	0/1:98:41,57:41:1468:57:2040:-154.359,0,-102.915	0/1:75:30,45:30:1076:45:1616:-123.148,0,-74.5756	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:93:93,0:93:3332:0:0:0,-27.9958,-300.097
chr09	20034979	.	TAAATAAG	TAAAATAAG	112069	PASS	AB=0.473031;ABP=39.6701;AC=130;AF=0.691489;AN=188;AO=7033;CIGAR=1M1I7M;DP=10124;DPB=11006.1;DPRA=0;EPP=15275;EPPR=6591.26;GTI=0;LEN=1;MEANALT=1.60638;MQM=34.0769;MQMR=55.0574;NS=94;NUMALT=1;ODDS=3.60272;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=234576;QR=106843;RO=3034;RPL=7033;RPP=15275;RPPR=6591.26;RPR=0;RUN=1;SAF=7033;SAP=15275;SAR=0;SRF=3034;SRP=6591.26;SRR=0;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:37,25:37:1283:25:835:-50.8506,0,-96.964	1/1:92:0,92:0:0:92:3075:-255.342,-27.6948,0	1/1:221:0,220:0:0:220:7445:-617.046,-66.2266,0	1/1:267:0,265:0:0:265:8776:-724.735,-79.773,0	0/1:113:59,51:59:2057:51:1734:-110.423,0,-151.086	0/1:31:15,14:15:523:14:465:-30.0611,0,-38.1684	0/1:159:77,82:77:2686:82:2700:-176.035,0,-193.063	0/1:122:53,68:53:1836:68:2286:-153.973,0,-127.909	0/1:172:78,94:78:2743:94:3152:-210.109,0,-194.888	1/1:102:0,102:0:0:102:3344:-276.307,-30.7051,0	0/1:47:21,26:21:736:26:870:-57.8146,0,-52.2196	1/1:85:0,85:0:0:85:2861:-237.586,-25.5876,0	0/1:71:22,49:22:786:49:1657:-116.254,0,-49.5241	0/1:50:17,33:17:594:33:1071:-73.3744,0,-38.5495	0/1:55:26,29:26:917:29:963:-62.7219,0,-66.2344	0/1:55:31,23:31:1094:23:782:-48.1136,0,-81.8479	0/1:12:3,9:3:108:9:306:-22.1404,0,-6.45243	0/1:29:18,11:18:626:11:377:-22.6467,0,-47.7828	1/1:28:0,27:0:0:27:931:-76.8983,-8.12781,0	0/1:323:169,150:169:5901:150:4962:-313.159,0,-434.066	1/1:165:0,165:0:0:165:5549:-461.512,-49.67,0	0/1:184:145,38:145:5118:38:1244:-47.282,0,-404.969	1/1:159:0,158:0:0:158:5190:-427.735,-47.5627,0	0/1:123:49,73:49:1742:73:2487:-169.12,0,-119.602	1/1:143:0,143:0:0:143:4840:-401.312,-43.0473,0	0/1:292:144,146:144:5069:146:4771:-305.249,0,-368.481	0/1:357:193,163:193:6810:163:5577:-353.754,0,-504.06	0/1:35:13,22:13:456:22:715:-48.6037,0,-30.787	0/1:350:192,156:192:6752:156:5173:-321.686,0,-502.237	0/1:126:56,70:56:1989:70:2377:-159.28,0,-141.017	0/1:188:92,95:92:3231:95:3141:-202.409,0,-233.651	1/1:18:0,17:0:0:17:583:-48.4233,-5.11751,0	0/1:42:19,23:19:653:23:791:-53.2367,0,-46.3509	1/1:15:0,15:0:0:15:493:-40.9464,-4.51545,0	0/1:10:4,6:4:141:6:204:-14.2629,0,-10.015	0/1:44:23,21:23:816:21:714:-45.7503,0,-60.4464	0/1:119:49,70:49:1737:70:2307:-153.872,0,-120.666	1/1:105:0,105:0:0:105:3568:-295.678,-31.6082,0	0/1:30:13,17:13:464:17:581:-39.3049,0,-32.9988	1/1:14:0,14:0:0:14:468:-39.1976,-4.21442,0	1/1:121:3,116:3:108:116:3890:-313.389,-26.0276,0	1/1:41:0,41:0:0:41:1410:-116.671,-12.3422,0	0/1:224:126,96:126:4437:96:3254:-203.266,0,-331.247	0/1:43:9,34:9:319:34:1110:-78.7896,0,-16.0696	0/1:37:15,22:15:532:22:733:-49.3375,0,-37.0341	1/1:151:0,151:0:0:151:4923:-406.176,-45.4555,0	0/1:196:119,77:119:4208:77:2596:-156.287,0,-319.358	1/1:172:1,171:1:33:171:5641:-461.054,-48.4793,0	1/1:166:0,166:0:0:166:5492:-453.328,-49.971,0	0/1:117:68,48:68:2410:48:1583:-96.0738,0,-181.736	1/1:141:0,141:0:0:141:4645:-383.474,-42.4452,0	0/1:14:6,8:6:212:8:268:-18.2054,0,-15.1979	1/1:153:0,152:0:0:152:5114:-423.906,-45.7566,0	1/1:83:0,83:0:0:83:2764:-228.34,-24.9855,0	0/1:16:7,9:7:236:9:291:-19.6016,0,-16.7079	0/1:166:107,58:107:3750:58:2001:-115.691,0,-287.224	0/1:70:34,36:34:1183:36:1197:-78.3296,0,-85.5741	0/1:9:8,1:8:287:1:34:-0.389787,0,-23.4156	0/1:19:11,8:11:390:8:236:-13.6221,0,-29.7102	0/1:102:58,43:58:2057:43:1441:-89.2059,0,-153.587	0/1:77:33,43:33:1179:43:1430:-95.168,0,-83.0708	0/1:16:13,3:13:446:3:100:-3.75691,0,-35.6254	0/1:185:91,94:91:3226:94:3128:-202.136,0,-234.627	0/1:182:112,70:112:3961:70:2315:-136.436,0,-301.595	0/1:79:32,46:32:1119:46:1578:-107.315,0,-77.0869	1/1:113:0,113:0:0:113:3726:-307.693,-34.0164,0	0/1:174:78,96:78:2733:96:3157:-208.093,0,-193.6	0/1:159:112,46:112:3973:46:1501:-76.0448,0,-309.396	1/1:33:1,31:1:35:31:1045:-82.9985,-6.40315,0	1/1:91:1,89:1:31:89:2905:-238.596,-24.3127,0	0/1:29:12,16:12:424:16:540:-35.9999,0,-29.7393	0/1:12:7,5:7:246:5:168:-10.5408,0,-18.8545	1/1:189:1,188:1:35:188:6216:-512.6,-53.399,0	0/1:68:22,46:22:776:46:1536:-107.751,0,-49.5251	1/1:222:0,222:0:0:222:7454:-618.399,-66.8287,0	1/1:198:0,196:0:0:196:6499:-536.644,-59.0019,0	0/1:134:82,51:82:2916:51:1727:-102.497,0,-221.955	1/1:78:0,77:0:0:77:2612:-216.722,-23.1793,0	0/1:18:10,7:10:341:7:218:-12.7823,0,-25.6176	1/1:121:2,119:2:60:119:4018:-326.263,-30.8508,0	0/1:157:79,78:79:2787:78:2632:-170.71,0,-203.508	1/1:327:1,324:1:29:324:10673:-877.583,-95.8432,0	1/1:55:0,55:0:0:55:1823:-150.036,-16.5567,0	1/1:68:0,68:0:0:68:2237:-184.725,-20.47,0	0/1:27:9,18:9:319:18:599:-41.4136,0,-20.903	1/1:96:0,94:0:0:94:3129:-256.973,-28.2968,0	0/1:19:8,11:8:283:11:371:-25.1121,0,-20.0685	0/1:61:25,36:25:890:36:1235:-84.0242,0,-61.943	1/1:73:0,72:0:0:72:2465:-203.932,-21.6742,0	0/1:21:4,17:4:143:17:586:-42.4669,0,-6.8819	0/1:89:43,43:43:1521:43:1467:-95.8405,0,-110.382	0/1:82:66,15:66:2340:15:495:-16.2787,0,-185.506	1/1:130:0,127:0:0:127:4192:-345.141,-38.2308,0	1/1:85:0,84:0:0:84:2811:-231.366,-25.2865,0
chr09	20035055	.	GACT	TACG,TACT	228963	PASS	AB=0.538711,0.458854;ABP=83.2039,93.6084;AC=129,59;AF=0.68617,0.31383;AN=188;AO=8063,2835;CIGAR=1X2M1X,1X3M;DP=10922;DPB=10922;DPRA=0,0.866587;EPP=17511.6,6159.13;EPPR=0;GTI=5;LEN=4,1;MEANALT=1.92553,2.23077;MQM=53.5843,59.9093;MQMR=0;NS=94;NUMALT=2;ODDS=0.240101;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=285863,101399;QR=0;RO=0;RPL=8063,2835;RPP=17511.6,6159.13;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=17511.6,6159.13;SAR=8063,2835;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:56:0,26,29:0:0:26,29:918,1042:-158.283,-84.998,-77.1712,-73.2784,0,-64.5485	1/1:282:0,282,0:0:0:282,0:9988,0:-885.16,-84.8905,0,-885.16,-84.8905,-885.16	1/1:148:0,148,0:0:0:148,0:5221,0:-461.834,-44.5524,0,-461.834,-44.5524,-461.834	1/1:275:0,275,0:0:0:275,0:9796,0:-878.864,-82.7833,0,-878.864,-82.7833,-878.864	1/2:114:0,54,57:0:0:54,57:1909,2044:-322.021,-166.771,-150.515,-155.311,0,-138.153	1/2:77:0,34,43:0:0:34,43:1218,1540:-223.593,-125.944,-115.709,-98.0033,0,-85.0591	1/2:207:0,98,109:0:0:98,109:3492,3908:-600.924,-319.096,-289.595,-282.183,0,-249.371	1/2:130:0,72,58:0:0:72,58:2566,2080:-377.402,-170.006,-148.331,-207.752,0,-190.293	1/2:136:0,64,71:0:0:64,71:2253,2541:-388.587,-207.206,-187.94,-181.374,0,-160.001	1/1:78:0,78,0:0:0:78,0:2761,0:-248.361,-23.4803,0,-248.361,-23.4803,-248.361	1/2:22:0,10,12:0:0:10,12:346,428:-63.3195,-35.2464,-32.2361,-28.4235,0,-24.8111	1/1:66:0,66,0:0:0:66,0:2311,0:-206.086,-19.868,0,-206.086,-19.868,-206.086	1/2:38:0,27,11:0:0:27,11:967,396:-111.412,-32.6714,-24.5436,-79.0998,0,-75.7885	1/2:53:0,26,27:0:0:26,27:923,972:-154.758,-79.6701,-71.8433,-75.4448,0,-67.317	1/2:48:0,27,21:0:0:27,21:957,756:-139.888,-62.0456,-53.9178,-78.2,0,-71.8784	1/2:39:0,19,20:0:0:19,20:683,720:-114.743,-59.1082,-53.3886,-55.9937,0,-49.9731	1/2:60:0,37,23:0:0:37,23:1329,820:-175.448,-67.1988,-56.0607,-108.606,0,-101.682	1/2:54:0,21,32:0:0:21,32:739,1137:-151.781,-92.6448,-86.3232,-59.1271,0,-49.4941	1/1:37:0,36,1:0:0:36,1:1265,36:-112.106,-10.8371,0,-109.168,-7.53984,-108.867	1/2:325:0,166,156:0:0:166,156:5839,5567:-928.4,-453.789,-403.818,-474.606,0,-427.646	1/1:245:0,243,1:0:0:243,1:8600,34:-771.285,-73.1503,0,-768.797,-70.6869,-768.496	1/2:151:0,55,96:0:0:55,96:1941,3410:-436.04,-278.214,-261.657,-158.18,0,-129.281	1/1:116:0,114,2:0:0:114,2:4044,72:-361.778,-34.3174,0,-355.903,-28.0828,-355.301	1/2:190:0,122,68:0:0:122,68:4334,2448:-551.722,-200.104,-163.379,-351.976,0,-331.506	1/1:58:0,58,0:0:0:58,0:2056,0:-185.064,-17.4597,0,-185.064,-17.4597,-185.064	1/2:322:0,166,156:0:0:166,156:5879,5534:-929.404,-451.219,-401.248,-478.539,0,-431.578	1/2:209:0,81,127:0:0:81,127:2876,4549:-604.969,-370.979,-346.596,-233.986,0,-195.756	1/2:30:0,26,4:0:0:26,4:921,140:-86.6592,-11.7405,-3.91368,-75.2691,0,-74.065	1/2:439:0,228,210:0:0:228,210:8097,7520:-1269.56,-613.251,-544.616,-656.309,0,-593.093	1/2:136:0,81,55:0:0:81,55:2859,1961:-392.685,-160.206,-135.823,-232.833,0,-216.276	1/2:187:0,114,73:0:0:114,73:4058,2594:-541.973,-211.726,-177.409,-330.602,0,-308.627	1/2:10:0,9,1:0:0:9,1:321,36:-29.423,-3.29724,-0.587975,-26.4852,0,-26.1842	1/2:14:0,10,4:0:0:10,4:353,144:-40.8083,-12.1095,-9.0992,-29.0565,0,-27.8524	1/1:4:0,4,0:0:0:4,0:144,0:-13.2947,-1.20412,0,-13.2947,-1.20412,-13.2947	1/2:8:0,6,2:0:0:6,2:208,72:-23.1082,-6.23466,-4.42848,-17.2299,0,-16.6279	1/2:6:0,2,4:0:0:2,4:72,144:-17.975,-12.1095,-11.5074,-6.22497,0,-5.02085	1/2:154:0,94,60:0:0:94,60:3322,2156:-446.387,-176.241,-147.944,-270.503,0,-252.441	1/1:194:0,194,0:0:0:194,0:6839,0:-613.333,-58.3998,0,-613.333,-58.3998,-613.333	1/2:51:0,33,18:0:0:33,18:1167,642:-146.236,-52.69,-42.756,-93.8994,0,-88.4809	1/1:9:0,9,0:0:0:9,0:324,0:-29.464,-2.70927,0,-29.464,-2.70927,-29.464	1/1:185:0,184,1:0:0:184,1:6514,36:-585.207,-55.3895,0,-582.269,-52.0923,-581.968	1/1:27:0,27,0:0:0:27,0:962,0:-86.7791,-8.12781,0,-86.7791,-8.12781,-86.7791	1/2:201:0,117,84:0:0:117,84:4162,3008:-582.899,-245.659,-210.439,-337.596,0,-312.309	1/2:75:0,48,27:0:0:48,27:1706,972:-218.481,-79.6701,-65.2207,-139.169,0,-131.041	1/2:53:0,25,28:0:0:25,28:896,993:-154.215,-81.2491,-73.7233,-73.3221,0,-64.8932	1/1:103:0,103,0:0:0:103,0:3633,0:-326.749,-31.0061,0,-326.749,-31.0061,-326.749	1/2:190:0,107,83:0:0:107,83:3809,2984:-541.543,-243.806,-211.596,-298.089,0,-273.104	1/1:316:0,315,1:0:0:315,1:11173,36:-1000.79,-94.8245,0,-997.853,-91.5272,-997.552	1/1:171:0,171,0:0:0:171,0:6075,0:-544.762,-51.4761,0,-544.762,-51.4761,-544.762	1/2:160:0,72,88:0:0:72,88:2554,3149:-464.914,-257.143,-235.469,-208.126,0,-181.636	1/1:245:0,244,0:0:0:244,0:8662,0:-776.727,-73.4513,0,-776.727,-73.4513,-776.727	1/2:7:0,3,4:0:0:3,4:107,144:-20.8176,-12.1095,-11.2064,-9.06576,0,-7.86164	1/1:165:0,164,0:0:0:164,0:5809,0:-516.097,-49.3689,0,-516.097,-49.3689,-516.097	1/1:49:0,49,0:0:0:49,0:1725,0:-155.33,-14.7505,0,-155.33,-14.7505,-155.33	1/2:10:0,8,2:0:0:8,2:279,72:-28.8833,-6.23466,-3.82642,-23.0061,0,-22.4041	1/2:166:0,101,65:0:0:101,65:3594,2321:-479.591,-189.581,-159.177,-290.364,0,-270.797	1/2:69:0,36,33:0:0:36,33:1262,1180:-199.121,-96.5741,-85.737,-102.9,0,-92.9665	1/2:4:0,1,3:0:0:1,3:36,108:-12.1048,-9.17208,-8.87105,-3.29214,0,-2.38905	1/2:22:0,18,4:0:0:18,4:638,144:-64.0037,-12.1095,-6.69096,-52.2529,0,-51.0488	1/2:91:0,48,42:0:0:48,42:1700,1504:-260.981,-122.706,-108.256,-138.33,0,-125.686	1/2:71:0,40,31:0:0:40,31:1399,1116:-205.063,-91.4152,-79.374,-114.003,0,-104.671	1/2:5:0,2,3:0:0:2,3:72,108:-15.0375,-9.17208,-8.57002,-6.22497,0,-5.32188	1/2:265:0,172,93:0:0:172,93:6119,3343:-771.028,-273.089,-221.312,-498.297,0,-470.301	1/2:285:0,145,139:0:0:145,139:5137,4974:-823.548,-405.696,-362.047,-417.946,0,-376.103	1/2:79:0,39,40:0:0:39,40:1380,1402:-224.291,-114.432,-102.692,-110.208,0,-98.1665	1/1:126:0,126,0:0:0:126,0:4443,0:-397.991,-37.9298,0,-397.991,-37.9298,-397.991	1/2:316:0,170,146:0:0:170,146:6016,5229:-916.084,-426.781,-375.606,-489.658,0,-445.708	1/2:75:0,24,50:0:0:24,50:853,1777:-212.674,-144.8,-137.575,-67.8646,0,-52.8131	1/1:13:0,13,0:0:0:13,0:461,0:-41.769,-3.91339,0,-41.769,-3.91339,-41.769	1/1:84:0,84,0:0:0:84,0:2966,0:-259.521,-25.2865,0,-259.521,-25.2865,-259.521	1/2:69:0,41,28:0:0:41,28:1461,992:-200.077,-81.1656,-68.8233,-119.266,0,-110.837	1/2:12:0,8,4:0:0:8,4:287,144:-35.4822,-12.1095,-9.70126,-23.7319,0,-22.5278	1/1:106:0,105,0:0:0:105,0:3732,0:-329.227,-31.6082,0,-329.227,-31.6082,-329.227	1/2:60:0,38,22:0:0:38,22:1363,792:-174.451,-64.983,-53.5439,-109.826,0,-103.203	1/1:193:0,192,0:0:0:192,0:6789,0:-607.024,-57.7978,0,-607.024,-57.7978,-607.024	1/1:281:0,279,0:0:0:279,0:9884,0:-886.629,-83.9874,0,-886.629,-83.9874,-886.629	1/2:132:0,78,54:0:0:78,54:2757,1940:-380.751,-158.616,-135.136,-222.491,0,-206.235	1/1:153:0,153,0:0:0:153,0:5442,0:-478.806,-46.0576,0,-478.806,-46.0576,-478.806	1/2:9:0,5,4:0:0:5,4:180,144:-25.223,-12.1095,-10.6043,-13.4579,0,-12.2538	1/1:149:0,149,0:0:0:149,0:5305,0:-475.404,-44.8535,0,-475.404,-44.8535,-475.404	1/2:140:0,82,58:0:0:82,58:2915,2060:-398.548,-168.208,-143.524,-230.691,0,-213.231	1/1:282:0,282,0:0:0:282,0:10042,0:-902.138,-84.8905,0,-902.138,-84.8905,-902.138	1/1:97:0,97,0:0:0:97,0:3400,0:-305.809,-29.1999,0,-305.809,-29.1999,-305.809	1/1:54:0,54,0:0:0:54,0:1915,0:-172.399,-16.2556,0,-172.399,-16.2556,-172.399	1/2:77:0,48,29:0:0:48,29:1689,1044:-222.839,-85.5449,-71.0955,-137.65,0,-128.921	1/1:150:0,148,2:0:0:148,2:5269,72:-473.347,-44.5524,0,-467.472,-38.3178,-466.87	1/2:34:0,24,10:0:0:24,10:862,360:-98.3977,-29.7247,-22.5,-69.0302,0,-66.0199	1/2:82:0,49,33:0:0:49,33:1736,1188:-234.416,-97.2946,-82.5441,-137.475,0,-127.541	1/1:57:0,57,0:0:0:57,0:2036,0:-181.815,-17.1587,0,-181.815,-17.1587,-181.815	1/2:18:0,14,4:0:0:14,4:504,144:-53.1733,-12.1095,-7.89508,-41.4235,0,-40.2194	1/2:51:0,31,19:0:0:31,19:1106,680:-145.475,-55.4504,-46.1184,-90.0225,0,-84.3029	1/2:67:0,17,50:0:0:17,50:596,1796:-195.298,-146.871,-141.753,-48.7792,0,-33.7277	1/1:164:0,162,0:0:0:162,0:5761,0:-517.574,-48.7669,0,-517.574,-48.7669,-517.574	1/1:79:0,79,0:0:0:79,0:2794,0:-251.366,-23.7814,0,-251.366,-23.7814,-251.366
chr09	20078460	.	CACATC	CACGTT,CACATT	198198	PASS	AB=0.446668,0.545927;ABP=193.17,144.027;AC=130,58;AF=0.691489,0.308511;AN=188;AO=6062,4207;CIGAR=3M1X1M1X,5M1X;DP=10352;DPB=10352.3;DPRA=0,2.17148;EPP=13166.5,9129.71;EPPR=0;GTI=5;LEN=6,1;MEANALT=2.40426,2.8871;MQM=41.1552,57.5365;MQMR=0;NS=94;NUMALT=2;ODDS=0.0182973;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=207910,149788;QR=0;RO=0;RPL=6062,4206;RPP=13166.5,9129.71;RPPR=0;RPR=0,1;RUN=1,1;SAF=6062,4207;SAP=13166.5,9138.39;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:52:0,26,22:0:0:26,22:851,771:-127.578,-62.7116,-54.8848,-64.9098,0,-58.2871	1/1:23:0,22,0:0:0:22,0:749,0:-63.5792,-6.62266,0,-63.5792,-6.62266,-63.5792	1/1:70:0,69,0:0:0:69,0:2284,0:-196.439,-20.7711,0,-196.439,-20.7711,-196.439	1/1:45:0,45,0:0:0:45,0:1532,0:-135.796,-13.5464,0,-135.796,-13.5464,-135.796	1/2:22:0,10,12:0:0:10,12:347,424:-62.3251,-34.8797,-31.8694,-27.7906,0,-24.1782	1/2:13:0,5,8:0:0:5,8:156,288:-35.5504,-23.8426,-22.3374,-12.0272,0,-9.61892	1/2:28:0,8,20:0:0:8,20:268,707:-79.28,-57.9314,-55.5231,-21.6853,0,-15.6647	1/2:72:0,31,41:0:0:31,41:1037,1462:-199.347,-119.246,-109.914,-80.4373,0,-68.0951	1/2:49:0,29,19:0:0:29,19:997,680:-132.747,-55.5159,-46.786,-77.3238,0,-71.6043	1/1:46:0,45,0:0:0:45,0:1527,0:-134.86,-13.5464,0,-134.86,-13.5464,-134.86	1/2:225:0,128,95:0:0:128,95:4441,3404:-629.592,-277.655,-239.123,-351.976,0,-323.378	1/1:84:0,83,0:0:0:83,0:2824,0:-243.116,-24.9855,0,-243.116,-24.9855,-243.116	1/2:86:0,37,49:0:0:37,49:1255,1760:-240.414,-143.444,-132.305,-97.309,0,-82.5585	1/2:60:0,33,27:0:0:33,27:1078,968:-163.249,-79.2974,-69.3634,-84.2905,0,-76.1627	1/2:51:0,28,23:0:0:28,23:962,824:-143.64,-67.5596,-59.1308,-76.4279,0,-69.5043	1/2:77:0,45,31:0:0:45,31:1521,1079:-207.349,-87.7881,-74.2418,-119.617,0,-110.285	1/2:30:0,18,12:0:0:18,12:628,432:-84.0791,-35.3963,-29.9777,-49.0312,0,-45.4188	1/2:41:0,21,20:0:0:21,20:743,716:-116.195,-58.7039,-52.3823,-57.8386,0,-51.818	1/1:122:0,122,0:0:0:122,0:4209,0:-361.483,-36.7257,0,-361.483,-36.7257,-361.483	1/2:22:0,12,10:0:0:12,10:428,356:-63.626,-29.3705,-25.7582,-34.6089,0,-31.5986	1/1:43:0,43,0:0:0:43,0:1504,0:-131.834,-12.9443,0,-131.834,-12.9443,-131.834	1/2:37:0,5,32:0:0:5,32:170,1152:-107.849,-94.1892,-92.684,-13.9999,0,-4.36697	1/1:28:0,28,0:0:0:28,0:964,0:-84.3194,-8.42884,0,-84.3194,-8.42884,-84.3194	1/2:43:0,16,27:0:0:16,27:567,959:-123.194,-78.3815,-73.565,-45.1613,0,-37.0335	1/1:24:0,24,0:0:0:24,0:791,0:-69.6074,-7.22472,0,-69.6074,-7.22472,-69.6074	1/2:50:0,22,28:0:0:22,28:767,1004:-143.848,-82.1754,-75.5527,-62.0237,0,-53.5948	1/2:74:0,28,45:0:0:28,45:965,1601:-205.874,-129.531,-121.102,-76.433,0,-62.8867	1/2:21:0,10,10:0:0:10,10:358,360:-57.7877,-29.4263,-26.416,-28.41,0,-25.3997	1/2:57:0,20,37:0:0:20,37:699,1319:-164.096,-107.873,-101.852,-56.5732,0,-45.4351	1/2:37:0,22,15:0:0:22,15:758,536:-104.006,-44.0446,-37.4219,-60.3097,0,-55.7943	1/2:16:0,3,12:0:0:3,12:108,428:-43.6159,-34.9708,-34.0677,-8.70796,0,-5.0956	1/1:209:0,209,0:0:0:209,0:7223,0:-630.417,-62.9153,0,-630.417,-62.9153,-630.417	1/2:503:0,191,308:0:0:191,308:6586,10924:-1402.97,-887.011,-829.514,-516.02,0,-423.303	1/1:430:0,426,0:0:0:426,0:14451,0:-1244.23,-128.239,0,-1244.23,-128.239,-1244.23	1/2:504:0,229,272:0:0:229,272:7827,9694:-1390.11,-786.967,-718.031,-603.204,0,-521.324	1/2:827:0,338,481:0:0:338,481:11594,17109:-2285.23,-1391.83,-1290.08,-893.474,0,-748.679	1/2:80:0,33,47:0:0:33,47:1117,1666:-225.174,-135.966,-126.032,-89.5499,0,-75.4015	1/1:31:0,31,0:0:0:31,0:1071,0:-94.3761,-9.33193,0,-94.3761,-9.33193,-94.3761	1/2:272:0,136,136:0:0:136,136:4641,4831:-750.996,-392.875,-351.935,-358.461,0,-317.521	1/1:184:0,179,1:0:0:179,1:6150,36:-536.434,-53.8844,0,-533.497,-50.9277,-533.196	1/1:41:0,41,0:0:0:41,0:1438,0:-125.019,-12.3422,0,-125.019,-12.3422,-125.019	1/1:47:0,47,0:0:0:47,0:1613,0:-141.378,-14.1484,0,-141.378,-14.1484,-141.378	1/2:36:0,13,23:0:0:13,23:453,824:-103.398,-67.5467,-63.6333,-36.1982,0,-29.2745	1/2:39:0,26,11:0:0:26,11:893,396:-103.481,-32.3142,-24.4875,-71.1776,0,-67.8662	1/2:29:0,20,9:0:0:20,9:688,320:-80.8356,-26.3853,-20.3647,-54.7993,0,-52.0901	1/1:21:0,21,0:0:0:21,0:741,0:-66.3329,-6.32163,0,-66.3329,-6.32163,-66.3329	1/2:42:0,12,30:0:0:12,30:405,1059:-117.567,-86.2182,-82.6059,-31.6806,0,-22.6497	1/1:22:0,21,0:0:0:21,0:736,0:-64.9049,-6.32163,0,-64.9049,-6.32163,-64.9049	1/1:38:0,37,0:0:0:37,0:1295,0:-114.237,-11.1381,0,-114.237,-11.1381,-114.237	1/2:43:0,24,19:0:0:24,19:839,684:-122.876,-56.1708,-48.946,-67.0572,0,-61.3376	1/1:36:0,36,0:0:0:36,0:1229,0:-109.631,-10.8371,0,-109.631,-10.8371,-109.631	1/2:271:0,107,163:0:0:107,163:3737,5802:-769.332,-471.5,-439.289,-297.884,0,-248.816	1/1:24:0,23,0:0:0:23,0:788,0:-68.0231,-6.92369,0,-68.0231,-6.92369,-68.0231	1/1:26:0,25,0:0:0:25,0:855,0:-76.2481,-7.52575,0,-76.2481,-7.52575,-76.2481	1/2:458:0,232,219:0:0:232,219:7840,7764:-1232.91,-629.448,-559.609,-603.484,0,-537.558	1/2:61:0,23,38:0:0:23,38:742,1363:-169.156,-111.247,-104.323,-58.2389,0,-46.7998	1/2:50:0,28,21:0:0:28,21:957,756:-138.035,-61.6237,-53.1948,-76.4827,0,-70.161	1/2:338:0,153,181:0:0:153,181:5325,6448:-951.796,-524.731,-478.673,-427.167,0,-372.681	1/2:234:0,80,153:0:0:80,153:2743,5453:-663.819,-444.222,-420.139,-219.652,0,-173.595	1/2:34:0,23,11:0:0:23,11:768,383:-90.2713,-31.4881,-24.5644,-59.1214,0,-55.8101	1/2:38:0,13,25:0:0:13,25:461,896:-110.329,-73.4346,-69.5212,-37.2462,0,-29.7204	1/2:136:0,52,83:0:0:52,83:1788,2971:-384.573,-242.107,-226.453,-142.458,0,-117.473	1/2:30:0,11,19:0:0:11,19:370,684:-85.8215,-56.1646,-52.8532,-29.9999,0,-24.2803	1/2:42:0,13,29:0:0:13,29:456,1032:-120.922,-84.4636,-80.5502,-36.8071,0,-28.0772	1/2:42:0,24,18:0:0:24,18:833,644:-115.589,-52.8608,-45.6361,-63.0717,0,-57.6531	1/1:30:0,30,0:0:0:30,0:1027,0:-90.4138,-9.0309,0,-90.4138,-9.0309,-90.4138	1/2:38:0,14,23:0:0:14,23:475,815:-104.129,-66.3722,-62.1578,-37.8585,0,-30.9348	1/2:105:0,25,80:0:0:25,80:866,2835:-300.15,-231.237,-223.712,-69.2557,0,-45.1733	1/1:353:0,346,2:0:0:346,2:11871,72:-1038.57,-104.156,0,-1032.69,-98.2545,-1032.09	1/1:24:0,22,0:0:0:22,0:757,0:-65.2715,-6.62266,0,-65.2715,-6.62266,-65.2715	1/2:25:0,14,11:0:0:14,11:498,387:-71.7481,-31.8499,-27.6355,-40.2492,0,-36.9379	1/2:445:0,228,211:0:0:228,211:7850,7524:-1237.72,-612.083,-543.448,-625.704,0,-562.187	1/1:39:0,38,1:0:0:38,1:1304,36:-112.469,-11.4391,0,-109.531,-8.1419,-109.23	1/2:78:0,55,23:0:0:55,23:1854,815:-210.076,-66.6427,-50.086,-143.778,0,-136.854	1/1:68:0,67,0:0:0:67,0:2268,0:-199.172,-20.169,0,-199.172,-20.169,-199.172	1/1:58:0,58,0:0:0:58,0:2029,0:-178.411,-17.4597,0,-178.411,-17.4597,-178.411	1/2:57:0,33,23:0:0:33,23:1150,820:-155.27,-66.8088,-56.8748,-88.5108,0,-81.5871	1/1:38:0,38,0:0:0:38,0:1314,0:-112.497,-11.4391,0,-112.497,-11.4391,-112.497	1/2:566:0,241,322:0:0:241,322:8289,11495:-1572.7,-932.473,-859.924,-640.329,0,-543.398	1/1:29:0,29,0:0:0:29,0:1005,0:-88.5638,-8.72987,0,-88.5638,-8.72987,-88.5638	1/2:39:0,11,28:0:0:11,28:394,991:-111.436,-81.0186,-77.7072,-30.7621,0,-22.3332	1/1:66:0,66,0:0:0:66,0:2303,0:-203.46,-19.868,0,-203.46,-19.868,-203.46	1/1:80:0,80,0:0:0:80,0:2723,0:-239.94,-24.0824,0,-239.94,-24.0824,-239.94	1/1:68:0,68,0:0:0:68,0:2337,0:-206.652,-20.47,0,-206.652,-20.47,-206.652	1/2:35:0,22,13:0:0:22,13:761,468:-99.2529,-38.5463,-31.9236,-61.0592,0,-57.1458	1/1:91:0,89,1:0:0:89,1:3021,36:-266.889,-26.7917,0,-263.951,-23.8221,-263.65	1/2:22:0,10,12:0:0:10,12:343,428:-61.8338,-35.2196,-32.2093,-26.9557,0,-23.3434	1/2:57:0,32,25:0:0:32,25:1095,863:-154.851,-70.3796,-60.7466,-84.8083,0,-77.2826	1/1:67:0,67,0:0:0:67,0:2297,0:-197.277,-20.169,0,-197.277,-20.169,-197.277	1/2:412:0,179,231:0:0:179,231:6166,8247:-1158.09,-671.794,-617.909,-486.394,0,-416.856	1/2:502:0,216,285:0:0:216,285:7359,10155:-1404.48,-826.608,-761.586,-578.006,0,-492.213	1/2:44:0,20,24:0:0:20,24:706,832:-124.41,-67.9131,-61.8925,-56.8437,0,-49.619	1/1:5:0,5,0:0:0:5,0:178,0:-15.2036,-1.50515,0,-15.2036,-1.50515,-15.2036	1/1:45:0,44,0:0:0:44,0:1529,0:-135.128,-13.2453,0,-135.128,-13.2453,-135.128
chr09	20130512	.	TTCA	CTCG,TTCG	514522	PASS	AB=0.518979,0.477634;ABP=39.0291,53.0345;AC=131,57;AF=0.696809,0.303191;AN=188;AO=13783,5521;CIGAR=1X2M1X,3M1X;DP=19374;DPB=19375.5;DPRA=0,1.17931;EPP=29923.7,11983;EPPR=9.52472;GTI=0;LEN=4,1;MEANALT=2.43617,2.70423;MQM=59.9322,59.987;MQMR=60;NS=94;NUMALT=2;ODDS=12.7641;PAIRED=0,0;PAIREDR=0;PAO=4.5,1.5;PQA=162,54;PQR=0;PRO=0;QA=481711,196047;QR=102;RO=3;RPL=7723,2997;RPP=438.718,91.0055;RPPR=9.52472;RPR=6060,2524;RUN=1,1;SAF=7722,2996;SAP=437.67,90.2629;SAR=6061,2525;SRF=3;SRP=9.52472;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:94:0,54,39:0:0:54,39:1914,1379:-268.233,-112.306,-96.0502,-155.921,0,-144.181	1/1:303:0,303,0:0:0:303,0:10618,0:-955.536,-91.2121,0,-955.536,-91.2121,-955.536	1/1:375:0,373,0:0:0:373,0:13082,0:-1176.88,-112.284,0,-1176.88,-112.284,-1176.88	1/1:535:0,528,3:0:0:528,3:18400,108:-1655.34,-158.944,0,-1646.53,-150.096,-1645.62	1/2:144:0,80,64:0:0:80,64:2824,2291:-417.147,-187.185,-163.102,-230.318,0,-211.052	1/2:95:0,45,50:0:0:45,50:1572,1787:-273.924,-146.06,-132.514,-128.217,0,-113.165	1/2:203:0,109,93:0:0:109,93:3824,3281:-578.47,-267.276,-234.464,-311.308,0,-283.312	1/2:308:0,141,166:0:0:141,166:4887,5844:-873.074,-475.877,-433.432,-397.314,0,-347.343	1/2:280:0,141,139:0:0:141,139:4852,4936:-796.527,-402.492,-360.047,-394.385,0,-352.542	1/1:184:0,184,0:0:0:184,0:6406,0:-576.642,-55.3895,0,-576.642,-55.3895,-576.642	1/2:146:0,90,55:0:0:90,55:3120,1949:-412.35,-158.768,-131.675,-253.574,0,-237.017	1/1:231:0,230,0:0:0:230,0:7991,0:-718.876,-69.2369,0,-718.876,-69.2369,-718.876	1/2:243:1,125,117:1:36:125,117:4387,4135:-690.542,-333.818,-299.127,-354.08,0,-321.797	1/2:152:0,72,78:0:0:72,78:2496,2741:-426.051,-223.178,-201.504,-202.948,0,-179.468	1/2:228:0,121,106:0:0:121,106:4228,3738:-648.391,-304.459,-268.035,-344.031,0,-312.122	1/2:126:0,65,60:0:0:65,60:2267,2144:-359.238,-174.865,-155.298,-184.424,0,-166.363	1/2:136:0,79,56:0:0:79,56:2777,1956:-385.141,-159.186,-135.404,-226.034,0,-209.176	1/2:133:0,69,64:0:0:69,64:2420,2268:-382.049,-185.115,-164.344,-197.287,0,-178.021	1/1:101:0,100,0:0:0:100,0:3536,0:-318.093,-30.103,0,-318.093,-30.103,-318.093	1/2:376:0,221,154:0:0:221,154:7803,5492:-1083.24,-447.807,-381.28,-635.543,0,-589.185	1/1:354:0,350,1:0:0:350,1:12167,36:-1094.58,-105.361,0,-1091.65,-102.411,-1091.34	1/2:112:0,39,73:0:0:39,73:1342,2595:-320.81,-211.824,-200.084,-109.335,0,-87.3594	1/1:178:0,177,1:0:0:177,1:6201,36:-557.839,-53.2823,0,-554.902,-49.9851,-554.601	1/2:201:0,106,93:0:0:106,93:3698,3297:-569.484,-268.72,-236.811,-300.883,0,-272.887	1/1:149:0,146,2:0:0:146,2:5116,72:-460.281,-43.9504,0,-454.406,-37.969,-453.804	1/2:623:0,328,292:0:0:328,292:11449,10377:-1776.92,-845.707,-746.969,-931.313,0,-843.412	1/2:524:0,279,241:0:0:279,241:9779,8554:-1492.72,-696.996,-613.009,-795.755,0,-723.207	1/2:113:0,53,60:0:0:53,60:1859,2135:-325.635,-174.356,-158.401,-151.633,0,-133.571	1/2:486:0,251,235:0:0:251,235:8757,8389:-1396.5,-684.272,-608.713,-712.58,0,-641.838	1/2:150:0,91,58:0:0:91,58:3208,2057:-428.619,-167.649,-140.255,-261.032,0,-243.573	1/2:241:0,104,136:0:0:104,136:3601,4836:-686.799,-394.154,-362.847,-292.695,0,-251.755	1/1:20:0,20,0:0:0:20,0:699,0:-63.2332,-6.0206,0,-63.2332,-6.0206,-63.2332	1/2:30:0,16,14:0:0:16,14:568,504:-87.7613,-41.4837,-36.6672,-46.6351,0,-42.4207	1/1:17:0,17,0:0:0:17,0:610,0:-55.2329,-5.11751,0,-55.2329,-5.11751,-55.2329	1/2:13:0,7,6:0:0:7,6:244,203:-36.6442,-16.795,-14.6878,-20.1921,0,-18.386	1/2:39:0,21,18:0:0:21,18:723,640:-111.227,-52.5108,-46.1891,-59.0661,0,-53.6476	1/2:532:0,258,273:0:0:258,273:9049,9728:-1529.32,-792.932,-715.266,-736.381,0,-654.2	1/1:204:0,201,1:0:0:201,1:7002,36:-629.914,-60.507,0,-626.977,-57.5496,-626.676	1/2:133:0,80,51:0:0:80,51:2819,1815:-377.533,-148.015,-123.932,-229.608,0,-214.256	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:246:0,244,1:0:0:244,1:8564,36:-770.458,-73.4513,0,-767.521,-70.469,-767.22	1/1:106:0,105,0:0:0:105,0:3675,0:-330.686,-31.6082,0,-330.686,-31.6082,-330.686	1/2:411:0,224,186:0:0:224,186:7870,6651:-1182.81,-542.257,-474.826,-640.49,0,-584.498	1/2:191:1,90,100:1:36:90,100:3185,3534:-543.993,-284.869,-260.714,-256.481,0,-229.316	1/2:167:0,102,65:0:0:102,65:3575,2323:-480.667,-189.763,-159.058,-291.258,0,-271.692	1/1:205:0,202,0:0:0:202,0:6973,0:-626.953,-60.8081,0,-626.953,-60.8081,-626.953	1/2:230:0,137,92:0:0:137,92:4805,3283:-658.751,-267.734,-226.493,-391.11,0,-363.415	1/1:266:0,264,1:0:0:264,1:9153,36:-823.437,-79.4719,0,-820.499,-76.5046,-820.198	1/1:144:0,144,0:0:0:144,0:5006,0:-450.698,-43.3483,0,-450.698,-43.3483,-450.698	1/2:310:0,163,147:0:0:163,147:5721,5238:-892.813,-427.222,-378.154,-465.945,0,-421.693	1/1:190:0,188,1:0:0:188,1:6575,36:-591.48,-56.5936,0,-588.543,-53.6562,-588.242	1/2:19:0,13,6:0:0:13,6:444,207:-53.1892,-17.1607,-13.2473,-36.3722,0,-34.566	1/1:264:0,263,1:0:0:263,1:9259,36:-832.899,-79.1709,0,-829.962,-75.8736,-829.661	1/1:93:0,93,0:0:0:93,0:3272,0:-294.703,-27.9958,0,-294.703,-27.9958,-294.703	1/2: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chr09	20486284	.	A	G	245253	PASS	AB=0.565686;ABP=232.369;AC=143;AF=0.760638;AN=188;AO=11514;CIGAR=1X;DP=14243;DPB=14243;DPRA=0;EPP=25005.3;EPPR=5924.62;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.9865;MQMR=59.978;NS=94;NUMALT=1;ODDS=6.04112;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=411423;QR=97655;RO=2727;RPL=0;RPP=25005.3;RPPR=5924.62;RPR=11514;RUN=1;SAF=11514;SAP=25005.3;SAR=0;SRF=2727;SRP=5924.62;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:55:0,55:0:0:55:1964:-177.035,-16.5567,0	1/1:240:2,238:2:72:238:8459:-754.478,-65.4105,0	1/1:114:0,114:0:0:114:4092:-368.465,-34.3174,0	1/1:666:0,666:0:0:666:23838:-2144.68,-200.486,0	0/1:80:30,50:30:1076:50:1762:-134.777,0,-73.0705	0/1:105:33,72:33:1188:72:2588:-201.56,0,-75.6204	0/1:146:39,107:39:1396:107:3816:-299.688,0,-81.5603	1/1:261:1,260:1:36:260:9287:-831.827,-74.9706,0	0/1:101:67,34:67:2400:34:1212:-78.9823,0,-185.853	1/1:189:0,189:0:0:189:6686:-601.819,-56.8947,0	0/1:229:86,143:86:3084:143:5124:-392.365,0,-208.852	1/1:79:0,79:0:0:79:2817:-253.768,-23.7814,0	1/1:86:0,86:0:0:86:3069:-276.437,-25.8886,0	0/1:122:85,37:85:3040:37:1324:-82.7364,0,-237.105	0/1:85:56,29:56:1993:29:1032:-67.6059,0,-154.055	0/1:103:59,44:59:2120:44:1573:-110.854,0,-160.062	0/1:85:27,58:27:972:58:2084:-162.242,0,-62.2104	0/1:56:38,18:38:1345:18:648:-41.7942,0,-104.49	1/1:113:0,113:0:0:113:4045:-364.236,-34.0164,0	0/1:210:110,100:110:3956:100:3580:-259.191,0,-293.012	1/1:103:0,103:0:0:103:3684:-331.759,-31.0061,0	0/1:61:36,25:36:1280:25:896:-62.5975,0,-97.1404	0/1:150:85,65:85:3044:65:2317:-163.634,0,-229.035	1/1:234:1,233:1:36:233:8333:-746.378,-66.8427,0	1/1:76:0,76:0:0:76:2694:-242.702,-22.8783,0	0/1:404:185,219:185:6624:219:7832:-583.291,0,-474.623	0/1:255:116,139:116:4156:139:4973:-370.956,0,-297.46	0/1:29:14,15:14:496:15:540:-40.2067,0,-36.2444	0/1:327:154,173:154:5500:173:6161:-456.154,0,-396.691	1/1:186:0,185:0:0:185:6571:-591.113,-55.6906,0	0/1:194:68,126:68:2417:126:4524:-348.926,0,-159.385	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:185:8,177:8:288:177:6295:-540.375,-29.4231,0	1/1:422:6,416:6:216:416:14924:-1323.09,-107.244,0	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	0/1:25:12,13:12:432:13:460:-34.2096,0,-31.6954	0/1:204:103,101:103:3704:101:3616:-264.236,0,-272.15	1/1:243:0,243:0:0:243:8678:-781.011,-73.1503,0	0/1:110:51,59:51:1828:59:2116:-157.595,0,-131.688	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:287:0,287:0:0:287:10273:-924.489,-86.3956,0	1/1:82:0,82:0:0:82:2940:-264.834,-24.6845,0	0/1:204:99,104:99:3556:104:3713:-272.902,0,-258.778	0/1:91:28,63:28:1008:63:2244:-174.83,0,-63.6426	0/1:81:38,43:38:1364:43:1544:-114.87,0,-98.6773	1/1:264:0,264:0:0:264:9440:-849.558,-79.4719,0	0/1:93:41,52:41:1472:52:1852:-138.964,0,-104.78	1/1:197:0,197:0:0:197:7053:-634.829,-59.3029,0	1/1:110:0,110:0:0:110:3902:-351.373,-33.1133,0	0/1:188:67,121:67:2408:121:4344:-334.54,0,-160.378	1/1:175:0,175:0:0:175:6271:-564.255,-52.6803,0	1/1:110:7,103:7:252:103:3685:-308.821,-10.0843,0	1/1:112:0,112:0:0:112:4016:-361.626,-33.7154,0	1/1:72:0,72:0:0:72:2573:-231.818,-21.6742,0	1/1:247:2,245:2:72:245:8756:-781.192,-67.5177,0	1/1:180:0,180:0:0:180:6388:-575.009,-54.1854,0	0/1:172:41,131:41:1472:131:4696:-371.019,0,-80.999	1/1:340:9,331:9:324:331:11840:-1035.95,-72.8443,0	0/1:18:7,11:7:252:11:381:-29.2021,0,-17.6104	0/1:162:93,69:93:3324:69:2476:-174.327,0,-250.294	0/1:125:69,56:69:2476:56:2004:-143.005,0,-185.465	0/1:30:12,18:12:432:18:640:-48.8984,0,-30.1903	0/1:174:70,104:70:2497:104:3713:-281.991,0,-172.602	1/1:274:1,273:1:36:273:9741:-873.026,-78.8839,0	0/1:113:58,55:58:2076:55:1961:-142.749,0,-153.094	1/1:119:0,119:0:0:119:4233:-380.993,-35.8226,0	0/1:142:39,103:39:1396:103:3643:-285.327,0,-83.1928	1/1:68:0,68:0:0:68:2413:-217.425,-20.47,0	1/1:50:0,50:0:0:50:1781:-160.571,-15.0515,0	1/1:98:0,98:0:0:98:3489:-314.221,-29.5009,0	0/1:96:34,62:34:1205:62:2220:-171.166,0,-79.855	1/1:307:21,286:21:752:286:10215:-851.271,-24.41,0	1/1:101:0,101:0:0:101:3590:-323.305,-30.404,0	0/1:84:47,37:47:1669:37:1309:-92.823,0,-125.209	1/1:260:0,260:0:0:260:9292:-836.247,-78.2678,0	1/1:182:0,182:0:0:182:6536:-588.32,-54.7875,0	0/1:97:50,47:50:1792:47:1672:-121.567,0,-132.363	1/1:201:9,192:9:320:192:6880:-590.125,-31.3647,0	0/1:46:7,39:7:252:39:1404:-112.812,0,-9.18158	1/1:172:0,172:0:0:172:6114:-550.362,-51.7772,0	0/1:119:74,45:74:2641:45:1620:-110.267,0,-202.113	1/1:283:0,283:0:0:283:10129:-911.54,-85.1915,0	1/1:97:0,97:0:0:97:3484:-313.77,-29.1999,0	1/1:60:0,60:0:0:60:2144:-193.228,-18.0618,0	0/1:117:34,83:34:1224:83:2983:-233.481,0,-75.2465	1/1:156:3,153:3:108:153:5472:-482.533,-36.8855,0	0/1:26:15,11:15:536:11:396:-28.156,0,-40.748	0/1:76:41,35:41:1472:35:1256:-90.467,0,-109.898	1/1:92:0,92:0:0:92:3300:-297.218,-27.6948,0	0/1:322:61,261:61:2192:261:9340:-743.633,0,-100.614	0/1:383:116,267:116:4160:267:9533:-742.634,0,-259.288	0/1:80:62,18:62:2216:18:644:-34.2082,0,-175.622	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	1/1:94:0,94:0:0:94:3371:-303.605,-28.2968,0
chr09	20563275	.	TAAGT	AAAGT,AAAGA	337597	PASS	AB=0.463428,0.532968;ABP=90.0501,73.7414;AC=136,52;AF=0.723404,0.276596;AN=188;AO=11665,4023;CIGAR=1X4M,1X3M1X;DP=15744;DPB=15747.6;DPRA=0,0.913027;EPP=25333.2,8738.84;EPPR=9.52472;GTI=1;LEN=1,5;MEANALT=2.21277,2.49231;MQM=59.946,59.6555;MQMR=60;NS=94;NUMALT=2;ODDS=3.23823;PAIRED=0,0;PAIREDR=0;PAO=7.5,7.5;PQA=204,204;PQR=0;PRO=0;QA=417660,141675;QR=78;RO=3;RPL=11665,4023;RPP=25333.2,8738.84;RPPR=9.52472;RPR=0,0;RUN=1,1;SAF=0,0;SAP=25333.2,8738.84;SAR=11665,4023;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:75:0,75,0:0:0:75,0:2684,0:-241.797,-22.5773,0,-241.797,-22.5773,-241.797	1/1:159:0,159,0:0:0:159,0:5704,0:-513.287,-47.8638,0,-513.287,-47.8638,-513.287	1/1:421:0,420,0:0:0:420,0:15049,0:-1353.86,-126.433,0,-1353.86,-126.433,-1353.86	1/1:522:0,521,0:0:0:521,0:18640,0:-1676.88,-156.837,0,-1676.88,-156.837,-1676.88	1/2:104:0,51,53:0:0:51,53:1828,1830:-298.04,-148.944,-133.591,-149.448,0,-133.494	1/2:69:0,22,47:0:0:22,47:792,1656:-199.805,-135.179,-128.556,-64.983,0,-50.8346	1/2:122:0,55,66:0:0:55,66:1961,2306:-347.435,-187.581,-171.024,-159.857,0,-139.989	1/1:240:0,239,0:0:0:239,0:8529,0:-767.327,-71.9462,0,-767.327,-71.9462,-767.327	1/2:206:0,116,90:0:0:116,90:4155,3182:-598.323,-259.465,-224.546,-339.213,0,-312.12	1/1:83:0,83,0:0:0:83,0:2980,0:-268.432,-24.9855,0,-268.432,-24.9855,-268.432	1/2:59:0,11,47:0:0:11,47:387,1640:-164.879,-133.376,-130.064,-31.4955,0,-17.3471	1/1:120:0,118,0:0:0:118,0:4228,0:-380.375,-35.5215,0,-380.375,-35.5215,-380.375	1/1:80:0,80,0:0:0:80,0:2859,0:-257.469,-24.0824,0,-257.469,-24.0824,-257.469	1/2:89:0,39,49:0:0:39,49:1400,1733:-255.333,-141.135,-129.395,-114.195,0,-99.4441	1/2:84:0,44,40:0:0:44,40:1580,1405:-243.549,-114.658,-101.412,-129.246,0,-117.205	1/2:79:0,34,44:0:0:34,44:1224,1555:-226.66,-126.784,-116.549,-100.019,0,-86.7732	1/2:55:0,22,32:0:0:22,32:788,1132:-156.603,-92.3355,-85.7128,-64.4065,0,-54.7735	1/2:41:0,16,25:0:0:16,25:576,891:-119.976,-72.9754,-68.159,-47.3585,0,-39.8328	1/1:37:0,37,0:0:0:37,0:1315,0:-118.651,-11.1381,0,-118.651,-11.1381,-118.651	1/2:292:0,125,167:0:0:125,167:4476,5901:-845.857,-480.833,-443.204,-365.381,0,-315.109	1/1:332:1,327,0:1:22:327,0:11691,0:-1049.74,-96.7849,0,-1050.04,-98.4368,-1051.72	1/2:234:0,72,161:0:0:72,161:2576,5673:-671.919,-461.86,-440.186,-210.056,0,-161.59	1/2:344:0,141,201:0:0:141,201:5047,7068:-986.915,-575.396,-532.951,-411.593,0,-351.085	1/1:134:0,133,0:0:0:133,0:4753,0:-427.297,-40.037,0,-427.297,-40.037,-427.297	1/1:157:0,156,1:0:0:156,1:5584,36:-502.194,-46.9607,0,-499.256,-43.6634,-498.955	1/2:596:0,274,321:0:0:274,321:9794,11237:-1712.69,-914.124,-831.642,-798.642,0,-702.011	1/2:556:0,290,265:0:0:290,265:10398,9364:-1610.46,-762.504,-675.206,-847.949,0,-768.176	1/2:30:0,17,13:0:0:17,13:612,468:-88.4823,-38.5463,-33.4287,-50.2959,0,-46.3825	1/2:489:0,214,271:0:0:214,271:7676,9533:-1402.11,-776.012,-711.591,-626.114,0,-544.535	1/1:209:0,209,0:0:0:209,0:7492,0:-674.246,-62.9153,0,-674.246,-62.9153,-674.246	1/2:230:0,65,165:0:0:65,165:2332,5810:-663.533,-473.32,-453.753,-190.57,0,-140.9	1/1:16:0,16,0:0:0:16,0:572,0:-51.8134,-4.81648,0,-51.8134,-4.81648,-51.8134	1/2:58:0,27,30:0:0:27,30:972,1064:-166.097,-86.7826,-78.6548,-79.4162,0,-70.3853	1/2:9:0,7,2:0:0:7,2:248,71:-26.2343,-6.14,-4.03279,-20.4486,0,-19.8465	1/1:5:0,5,0:0:0:5,0:176,0:-16.185,-1.50515,0,-16.185,-1.50515,-16.185	1/2:15:0,5,10:0:0:5,10:180,352:-43.6895,-28.9997,-27.4946,-15.0469,0,-12.0366	1/2:222:0,123,98:0:0:123,98:4416,3465:-642.37,-282.141,-245.115,-360.224,0,-330.723	1/1:209:0,209,0:0:0:209,0:7500,0:-675.003,-62.9153,0,-675.003,-62.9153,-675.003	1/1:54:0,54,0:0:0:54,0:1922,0:-173.247,-16.2556,0,-173.247,-16.2556,-173.247	1/2:10:0,3,7:0:0:3,7:108,247:-29.2801,-20.4657,-19.5626,-9.17208,0,-7.06487	1/1:232:0,228,4:0:0:228,4:8180,144:-735.847,-68.6348,0,-724.097,-56.5253,-722.893	1/1:37:0,37,0:0:0:37,0:1324,0:-119.462,-11.1381,0,-119.462,-11.1381,-119.462	1/2:271:0,141,128:0:0:141,128:5048,4460:-774.319,-362.696,-320.251,-411.655,0,-373.123	1/2:56:0,27,29:0:0:27,29:972,1040:-164.493,-85.1823,-77.0545,-79.6701,0,-70.9402	1/2:67:0,35,32:0:0:35,32:1260,1094:-191.946,-89.1271,-78.5911,-103.169,0,-93.5365	1/2:174:0,85,89:0:0:85,89:3048,3132:-503.912,-255.306,-229.718,-248.962,0,-222.17	1/2:262:1,135,126:1:26:135,126:4832,4479:-756.31,-362.93,-324.329,-391.738,0,-355.847	1/1:339:0,337,1:0:0:337,1:12058,35:-1084.43,-101.447,0,-1081.58,-98.6044,-1081.28	1/1:151:1,149,1:1:30:149,1:5352,36:-478.779,-42.4848,0,-476.142,-41.8861,-478.239	1/2:207:0,125,81:0:0:125,81:4480,2852:-597.328,-231.942,-194.314,-365.38,0,-340.997	1/1:232:0,231,0:0:0:231,0:8280,0:-744.848,-69.5379,0,-744.848,-69.5379,-744.848	1/2:15:0,9,6:0:0:9,6:324,216:-44.4211,-17.9843,-15.2751,-26.7966,0,-24.9904	1/1:250:0,248,1:0:0:248,1:8885,31:-799.296,-74.6554,0,-796.808,-72.1919,-796.507	1/1:131:0,130,0:0:0:130,0:4648,0:-418.178,-39.1339,0,-418.178,-39.1339,-418.178	1/2:14:0,7,7:0:0:7,7:252,247:-41.0312,-20.4657,-18.3585,-20.9217,0,-18.8145	1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chr09	20587522	.	G	A	143942	PASS	AB=0.517616;ABP=35.2949;AC=52;AF=0.276596;AN=188;AO=6240;CIGAR=1X;DP=23046;DPB=23046;DPRA=1.1111;EPP=13553;EPPR=36449;GTI=0;LEN=1;MEANALT=1.06061;MQM=59.9886;MQMR=59.9925;NS=94;NUMALT=1;ODDS=23.7471;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=223055;QR=598834;RO=16800;RPL=2972;RPP=33.5;RPPR=17.9521;RPR=3268;RUN=1;SAF=2972;SAP=33.5;SAR=3268;SRF=8226;SRP=18.6635;SRR=8574;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:158:158,0:158:5653:0:0:0,-47.5627,-508.888	0/0:282:281,1:281:10051:1:36:0,-81.2922,-900.927	0/0:404:404,0:404:14374:0:0:0,-121.616,-1293.42	0/0:467:463,4:463:16542:4:144:0,-127.267,-1475.13	0/1:154:66,87:66:2357:87:3113:-234.116,0,-166.107	0/1:143:81,62:81:2895:62:2211:-156.207,0,-217.738	0/1:242:108,134:108:3857:134:4779:-357.416,0,-274.475	0/0:406:404,1:404:14411:1:36:0,-118.604,-1293.21	0/1:277:129,148:129:4624:148:5271:-391.138,0,-332.937	0/0:176:176,0:176:6263:0:0:0,-52.9813,-563.766	0/1:190:79,111:79:2785:111:3984:-301.554,0,-193.693	0/0:216:215,1:215:7641:1:36:0,-61.4242,-684.131	0/0:178:178,0:178:6323:0:0:0,-53.5833,-569.165	0/1:210:103,107:103:3645:107:3824:-281.14,0,-265.037	0/1:206:98,108:98:3500:108:3865:-286.031,0,-253.199	0/1:161:68,93:68:2436:93:3323:-250.822,0,-171.029	0/1:168:79,89:79:2819:89:3200:-237.649,0,-203.376	0/1:135:66,69:66:2351:69:2484:-183.174,0,-171.21	0/0:131:131,0:131:4673:0:0:0,-39.4349,-420.731	0/1:509:252,257:252:9005:257:9180:-672.945,0,-657.203	0/0:443:443,0:443:15810:0:0:0,-133.356,-1422.59	0/1:449:164,285:164:5831:285:10195:-782.313,0,-389.742	0/1:216:120,96:120:4304:96:3437:-244.52,0,-322.477	0/0:194:193,1:193:6898:1:36:0,-54.8015,-616.51	0/0:265:265,0:265:9462:0:0:0,-79.7729,-851.54	0/1:591:264,326:264:9421:326:11657:-871.025,0,-669.884	0/1:790:427,363:427:15258:363:12938:-926.423,0,-1135.12	0/1:74:35,39:35:1256:39:1392:-103.303,0,-91.0691	0/1:784:406,378:406:14544:378:13505:-979.23,0,-1072.68	0/0:273:272,1:272:9730:1:36:0,-78.5829,-872.045	0/1:285:151,134:151:5396:134:4757:-342.491,0,-399.976	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/1:50:26,24:26:936:24:858:-62.4897,0,-69.508	0/1:38:16,22:16:572:22:788:-59.8057,0,-40.3743	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/1:86:40,46:40:1428:46:1641:-122.088,0,-102.929	0/1:501:231,270:231:8251:270:9673:-719.701,0,-591.787	0/0:300:300,0:300:10617:0:0:0,-90.309,-955.447	0/0:163:163,0:163:5782:0:0:0,-49.0679,-520.5	0/1:18:10,8:10:360:8:284:-20.4848,0,-27.3258	0/0:382:378,4:378:13457:4:144:0,-101.68,-1197.61	0/0:86:86,0:86:3053:0:0:0,-25.8886,-274.999	0/1:449:200,249:200:7101:249:8908:-666.538,0,-503.988	0/1:213:116,97:116:4115:97:3484:-249.651,0,-306.416	0/1:150:74,76:74:2597:76:2728:-200.608,0,-188.822	0/1:265:143,122:143:5120:122:4337:-310.731,0,-381.169	0/1:280:121,158:121:4308:158:5661:-425.409,0,-303.698	0/0:446:446,0:446:15876:0:0:0,-134.259,-1428.53	0/0:181:181,0:181:6448:0:0:0,-54.4864,-580.408	0/1:372:196,176:196:6991:176:6301:-455.198,0,-517.268	0/0:271:270,1:270:9613:1:36:0,-77.9809,-861.525	0/1:38:16,22:16:576:22:784:-59.4448,0,-40.7358	0/0:295:295,0:295:10537:0:0:0,-88.8038,-948.244	0/0:135:135,0:135:4810:0:0:0,-40.639,-433.057	0/1:45:25,20:25:885:20:705:-50.2264,0,-66.4202	0/0:344:344,0:344:12283:0:0:0,-103.554,-1105.31	0/1:116:60,56:60:2133:56:2012:-146.434,0,-157.317	0/1:31:11,20:11:392:20:716:-55.4358,0,-26.2881	0/1:47:22,25:22:784:25:889:-66.1796,0,-56.7355	0/1:262:128,134:128:4542:134:4789:-352.295,0,-330.077	0/1:240:102,138:102:3603:138:4945:-372.95,0,-252.233	0/1:40:16,24:16:567:24:845:-64.3259,0,-39.3195	0/1:385:184,201:184:6590:201:7189:-531.167,0,-477.282	0/0:354:349,5:349:12415:5:180:0,-90.0125,-1100.45	0/1:164:83,81:83:2956:81:2889:-210.876,0,-216.906	0/0:280:280,0:280:9988:0:0:0,-84.2884,-898.858	0/1:386:187,199:187:6684:199:7128:-525.38,0,-485.438	0/0:308:303,5:303:10825:5:180:0,-76.1652,-957.599	0/0:114:114,0:114:4058:0:0:0,-34.3174,-365.405	0/0:153:153,0:153:5444:0:0:0,-46.0576,-490.083	0/1:194:93,101:93:3302:101:3606:-266.347,0,-239	0/1:30:13,17:13:468:17:612:-46.3825,0,-33.4287	0/0:297:297,0:297:10530:0:0:0,-89.4059,-947.619	0/1:184:88,96:88:3124:96:3441:-254.511,0,-225.996	0/0:472:468,4:468:16681:4:144:0,-128.773,-1487.63	0/0:420:419,1:419:14945:1:36:0,-122.834,-1341.18	0/1:329:170,159:170:6076:159:5674:-411.713,0,-447.902	0/0:266:263,3:263:9366:3:108:0,-69.9988,-832.83	0/1:52:27,25:27:964:25:900:-65.6675,0,-71.4233	0/0:293:293,0:293:10465:0:0:0,-88.2018,-941.769	0/1:424:194,230:194:6925:230:8189:-609.388,0,-495.68	0/0:418:416,0:416:14852:0:0:0,-125.228,-1336.08	0/0:197:197,0:197:7017:0:0:0,-59.3029,-631.593	0/0:173:173,0:173:6199:0:0:0,-52.0782,-558.006	0/1:190:106,84:106:3761:84:2999:-212.946,0,-281.495	0/0:389:381,8:381:13527:8:288:0,-90.8333,-1190.96	0/1:79:35,44:35:1252:44:1574:-118.17,0,-89.2037	0/1:160:75,85:75:2666:85:3041:-225.753,0,-192.018	0/0:194:194,0:194:6878:0:0:0,-58.3998,-619.093	0/1:140:76,64:76:2704:64:2292:-164.397,0,-201.458	0/1:269:136,133:136:4846:133:4775:-348.928,0,-355.318	0/1:167:59,108:59:2098:108:3843:-295.793,0,-138.816	0/0:221:221,0:221:788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chr09	20653010	.	CGT	TGC,CGC	517410	PASS	AB=0.460889,0.533544;ABP=141.445,104.842;AC=137,51;AF=0.728723,0.271277;AN=188;AO=13942,5605;CIGAR=1X1M1X,2M1X;DP=19642;DPB=19669.7;DPRA=0,1.28896;EPP=30234.3,12139.4;EPPR=18.2106;GTI=0;LEN=3,1;MEANALT=2.56383,2.88732;MQM=59.9311,59.9732;MQMR=60;NS=94;NUMALT=2;ODDS=0.958639;PAIRED=0,0;PAIREDR=0;PAO=83,0;PQA=2923,0;PQR=0;PRO=0;QA=481197,197492;QR=231;RO=7;RPL=6072,2995;RPP=506.521,60.4352;RPPR=5.80219;RPR=7870,2610;RUN=1,1;SAF=6067,2997;SAP=512.137,61.6346;SAR=7875,2608;SRF=2;SRP=5.80219;SRR=5;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:91:0,91,0:0:0:91,0:3149,0:-283.593,-27.3937,0,-283.593,-27.3937,-283.593	1/1:183:0,182,0:0:0:182,0:6327,0:-569.309,-54.7875,0,-569.309,-54.7875,-569.309	1/1:134:0,133,0:0:0:133,0:4551,0:-409.43,-40.037,0,-409.43,-40.037,-409.43	1/1:386:0,381,3:0:0:381,3:13159,108:-1183.82,-114.692,0,-1175.01,-105.864,-1174.11	1/2:127:0,33,94:0:0:33,94:1127,3360:-365.384,-273.96,-264.026,-91.4103,0,-63.1135	1/2:113:0,30,83:0:0:30,83:1040,2953:-324.639,-240.666,-231.636,-83.9706,0,-58.9851	1/2:246:0,113,130:0:0:113,130:3950,4583:-694.347,-373.173,-339.156,-321.194,0,-282.061	1/1:183:0,178,3:0:0:178,3:6164,108:-554.428,-53.5833,0,-545.615,-44.769,-544.712	1/2:150:0,46,104:0:0:46,104:1559,3676:-425.821,-299.417,-285.57,-126.426,0,-95.119	1/1:317:0,316,0:0:0:316,0:10926,0:-982.904,-95.1255,0,-982.904,-95.1255,-982.904	1/2:244:0,128,115:0:0:128,115:4410,4022:-685.457,-327.256,-288.724,-358.249,0,-323.631	1/1:73:0,73,0:0:0:73,0:2499,0:-225.165,-21.9752,0,-225.165,-21.9752,-225.165	1/1:53:0,53,0:0:0:53,0:1794,0:-161.417,-15.9546,0,-161.417,-15.9546,-161.417	1/2:231:0,116,113:0:0:116,113:3961,3943:-642.196,-320.766,-285.847,-321.493,0,-287.477	1/2:174:0,86,88:0:0:86,88:2905,3100:-488.194,-252.738,-226.849,-235.802,0,-209.311	1/2:136:0,69,66:0:0:69,66:2402,2294:-381.899,-186.579,-165.808,-195.396,0,-175.528	1/2:126:0,25,101:0:0:25,101:848,3612:-363.304,-294.542,-287.016,-68.7649,0,-38.3609	1/2:99:0,29,69:0:0:29,69:1000,2406:-276.961,-195.728,-186.998,-81.2805,0,-60.5094	1/1:34:0,32,0:0:0:32,0:1098,0:-98.7831,-9.63296,0,-98.7831,-9.63296,-98.7831	1/2:400:0,212,180:0:0:212,180:7381,6362:-1118.32,-518.147,-454.328,-600.184,0,-545.998	1/1:320:0,316,4:0:0:316,4:10911,135:-981.026,-95.1255,0,-970.085,-83.8471,-968.881	1/2:175:0,55,119:0:0:55,119:1919,4181:-496.368,-340.291,-323.734,-156.067,0,-120.245	1/2:203:0,106,97:0:0:106,97:3646,3450:-577.602,-281.511,-249.601,-296.441,0,-267.241	1/1:367:0,366,0:0:0:366,0:12540,0:-1128.06,-110.177,0,-1128.06,-110.177,-1128.06	1/1:155:0,154,1:0:0:154,1:5306,36:-477.33,-46.3586,0,-474.393,-43.0614,-474.092	1/2:569:0,263,302:0:0:263,302:9064,10701:-1607.99,-871.759,-792.588,-736.25,0,-645.339	1/2:519:0,293,225:0:0:293,225:10158,7901:-1468.66,-643.029,-554.827,-825.616,0,-757.884	1/2:104:0,50,54:0:0:50,54:1744,1912:-297.939,-156.099,-141.048,-142.191,0,-125.935	1/2:667:0,314,346:0:0:314,346:10918,12222:-1883.03,-995.347,-900.824,-887.698,0,-783.541	1/1:230:0,227,2:0:0:227,2:7852,72:-706.41,-68.3338,0,-700.535,-62.424,-699.933	1/2:272:0,127,144:0:0:127,144:4426,5040:-770.06,-410.12,-371.889,-360.008,0,-316.66	1/1:28:0,28,0:0:0:28,0:982,0:-88.6917,-8.42884,0,-88.6917,-8.42884,-88.6917	1/2:28:0,10,18:0:0:10,18:343,639:-80.2633,-52.4197,-49.4094,-28.1907,0,-22.7721	1/2:12:0,5,7:0:0:5,7:177,252:-35.3371,-20.9217,-19.4166,-14.7717,0,-12.6645	1/1:6:0,6,0:0:0:6,0:211,0:-19.3335,-1.80618,0,-19.3335,-1.80618,-19.3335	1/2:24:0,8,16:0:0:8,16:265,563:-67.6094,-46.1827,-43.7744,-21.7647,0,-16.9482	1/2:509:0,259,246:0:0:259,246:8942,8654:-1430.81,-704.514,-626.547,-726.341,0,-652.287	1/1:286:0,285,1:0:0:285,1:9966,36:-896.53,-85.7936,0,-893.592,-82.4963,-893.291	1/1:77:0,77,0:0:0:77,0:2619,0:-235.618,-23.1793,0,-235.618,-23.1793,-235.618	1/1:7:0,7,0:0:0:7,0:244,0:-22.2989,-2.10721,0,-22.2989,-2.10721,-22.2989	1/1:354:0,347,6:0:0:347,6:12020,212:-1081.31,-104.457,0,-1064.05,-87.1977,-1062.24	1/1:122:0,122,0:0:0:122,0:4301,0:-386.91,-36.7257,0,-386.91,-36.7257,-386.91	1/2:344:0,163,181:0:0:163,181:5629,6319:-971.379,-514.051,-464.984,-457.404,0,-402.917	1/2:249:0,131,115:0:0:131,115:4518,4044:-696.27,-329.253,-289.818,-367.084,0,-332.466	1/2:194:0,106,86:0:0:106,86:3643,3050:-544.397,-248.575,-216.665,-295.905,0,-270.016	1/2:379:0,192,187:0:0:192,187:6548,6627:-1071.13,-539.858,-482.06,-531.263,0,-474.97	1/2:222:0,67,154:0:0:67,154:2316,5460:-633.006,-444.833,-424.664,-188.181,0,-141.822	1/1:294:0,291,0:0:0:291,0:10066,0:-905.598,-87.5997,0,-905.598,-87.5997,-905.598	1/1:263:0,262,0:0:0:262,0:9105,0:-819.083,-78.8699,0,-819.083,-78.8699,-819.083	1/2:315:0,150,163:0:0:150,163:5153,5770:-888.495,-470.076,-424.921,-418.491,0,-369.423	1/1:403:0,400,1:0:0:400,1:13833,36:-1244.44,-120.412,0,-1241.5,-117.455,-1241.2	1/2:22:0,6,16:0:0:6,16:210,550:-62.0948,-45.0069,-43.2007,-17.4361,0,-12.6196	1/1:125:0,121,2:0:0:121,2:4173,68:-375.416,-36.4246,0,-369.901,-30.9097,-369.299	1/1:80:0,79,1:0:0:79,1:2755,36:-247.827,-23.7814,0,-244.889,-20.4841,-244.588	1/2:34:0,11,23:0:0:11,23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chr09	20663394	.	C	A	26380.3	PASS	AB=0.481044;ABP=13.0539;AC=52;AF=0.276596;AN=188;AO=1562;CIGAR=1X;DP=6392;DPB=6392;DPRA=0.891519;EPP=3248.8;EPPR=10195.7;GTI=3;LEN=1;MEANALT=1.08333;MQM=59.4814;MQMR=59.9478;NS=94;NUMALT=1;ODDS=0.2239;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55868;QR=172552;RO=4825;RPL=1545;RPP=3248.8;RPPR=10204.3;RPR=17;RUN=1;SAF=0;SAP=3394.85;SAR=1562;SRF=1;SRP=10471.7;SRR=4824;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:38:38,0:38:1356:0:0:0,-11.4391,-122.34	0/0:81:80,1:80:2872:1:21:0,-22.2835,-256.613	0/0:178:178,0:178:6366:0:0:0,-53.5833,-573.027	0/1:54:30,24:30:1061:24:864:-61.7137,0,-79.5437	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/1:60:32,28:32:1148:28:1008:-72.9746,0,-85.568	0/0:96:96,0:96:3404:0:0:0,-28.8989,-306.572	0/1:75:42,33:42:1503:33:1188:-84.635,0,-112.987	0/0:82:82,0:82:2932:0:0:0,-24.6845,-264.115	0/1:39:20,19:20:720:19:672:-49.0611,0,-53.3886	0/0:60:60,0:60:2141:0:0:0,-18.0618,-192.956	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/1:45:28,17:28:1008:17:612:-41.8671,0,-77.445	0/1:70:36,34:36:1284:34:1220:-88.7121,0,-94.7913	0/1:42:17,25:17:612:25:900:-68.6685,0,-42.7702	0/1:26:18,8:18:648:8:288:-18.4324,0,-50.8251	0/1:17:12,5:12:432:5:180:-11.4228,0,-34.1037	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/1:244:125,118:125:4476:118:4217:-306.005,0,-329.492	0/0:100:100,0:100:3577:0:0:0,-30.103,-322.136	0/1:46:16,30:16:572:30:1065:-82.3096,0,-37.966	0/1:69:42,27:42:1500:27:964:-66.3011,0,-114.394	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/1:221:99,121:99:3533:121:4326:-323.018,0,-251.691	0/1:168:90,78:90:3221:78:2804:-202.004,0,-239.408	0/1:26:9,17:9:324:17:604:-46.8638,0,-21.6791	0/1:236:123,113:123:4424:113:4049:-293.543,0,-326.797	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/1:66:38,28:38:1353:28:1004:-70.8055,0,-102.2	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:14:12,2:12:428:2:72:-2.6223,0,-34.6444	0/1:9:7,2:7:237:2:72:-4.12745,0,-18.9498	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:14:4,10:4:144:10:348:-27.3528,0,-9.0992	0/1:126:62,63:62:2228:63:2236:-163.468,0,-162.795	0/0:67:67,0:67:2389:0:0:0,-20.169,-215.265	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:121:121,0:121:4340:0:0:0,-36.4246,-390.774	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:90:41,49:41:1472:49:1732:-129.045,0,-105.683	0/1:42:21,21:21:752:21:756:-55.7078,0,-55.363	0/1:42:19,23:19:684:23:828:-61.1777,0,-49.2471	0/1:141:75,66:75:2669:66:2357:-169.937,0,-198.009	0/1:111:64,47:64:2296:47:1684:-118.027,0,-173.487	0/0:170:170,0:170:6070:0:0:0,-51.1751,-546.211	0/0:79:78,1:78:2808:1:36:0,-20.1831,-249.36	0/1:78:43,35:43:1544:35:1260:-90.2251,0,-115.773	0/0:95:95,0:95:3404:0:0:0,-28.5978,-306.574	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/0:94:94,0:94:3365:0:0:0,-28.2968,-303.064	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	0/0:118:118,0:118:4194:0:0:0,-35.5215,-376.828	0/1:24:12,12:12:432:12:432:-31.9965,0,-31.9965	0/1:12:5,7:5:180:7:252:-19.4166,0,-12.9397	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:81:37,44:37:1328:44:1584:-118.451,0,-95.4388	0/1:57:25,32:25:900:32:1148:-86.4619,0,-64.1623	0/1:12:6,6:6:216:6:216:-16.1782,0,-16.1782	0/1:130:67,63:67:2385:63:2252:-163.785,0,-175.772	0/0:140:138,2:138:4956:2:72:0,-35.3075,-439.35	0/1:48:29,19:29:1016:19:680:-47.0347,0,-77.2949	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/1:92:47,45:47:1658:45:1599:-115.666,0,-121.809	0/0:73:73,0:73:2615:0:0:0,-21.9752,-235.595	0/0:19:18,1:18:648:1:36:0,-2.12129,-55.0536	0/0:41:40,1:40:1440:1:36:0,-8.74395,-126.299	0/1:51:27,24:27:957:24:864:-62.7291,0,-71.0913	0/1:20:8,12:8:284:12:432:-33.1138,0,-19.8828	0/0:108:108,0:108:3865:0:0:0,-32.5112,-348.043	0/1:47:31,16:31:1108:16:576:-37.9742,0,-85.7953	0/0:104:102,1:102:3615:1:36:0,-27.7676,-321.937	0/0:94:94,0:94:3357:0:0:0,-28.2968,-302.345	0/1:139:83,56:83:2949:56:1997:-137.719,0,-223.8	0/0:63:63,0:63:2245:0:0:0,-18.9649,-202.312	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/0:63:62,1:62:2224:1:36:0,-15.3666,-196.826	0/1:79:50,29:50:1792:29:1039:-69.484,0,-137.781	0/0:211:211,0:211:7530:0:0:0,-63.5173,-677.652	0/0:74:73,1:73:2611:1:36:0,-18.6779,-231.639	0/0:59:59,0:59:2111:0:0:0,-17.7608,-190.258	0/1:33:10,23:10:356:23:824:-64.5493,0,-22.4473	0/0:85:84,1:84:3020:1:36:0,-21.9893,-268.429	0/1:27:13,14:13:468:14:489:-36.2108,0,-34.3318	0/1:50:20,30:20:716:30:1076:-81.9849,0,-49.7162	0/0:47:47,0:47:1673:0:0:0,-14.1484,-150.855	0/1:25:11,14:11:396:14:500:-37.781,0,-28.457	0/1:33:18,14:18:648:14:504:-35.8406,0,-48.8011	0/1:48:24,24:24:856:24:849:-62.2737,0,-62.9117	0/0:88:88,0:88:3145:0:0:0,-26.4906,-283.274	0/0:67:67,0:67:2393:0:0:0,-20.169,-215.625
chr09	20663410	.	T	C	25154.3	PASS	AB=0.476647;ABP=18.3248;AC=52;AF=0.276596;AN=188;AO=1551;CIGAR=1X;DP=6451;DPB=6451;DPRA=0.837385;EPP=3370.96;EPPR=10630.2;GTI=4;LEN=1;MEANALT=1;MQM=59.47;MQMR=59.9465;NS=94;NUMALT=1;ODDS=0.458245;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55252;QR=175284;RO=4898;RPL=1551;RPP=3370.96;RPPR=10638.9;RPR=0;RUN=1;SAF=0;SAP=3370.96;SAR=1551;SRF=1;SRP=10630.2;SRR=4897;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/0:83:82,0:82:2933:0:0:0,-24.6845,-264.001	0/0:181:181,0:181:6455:0:0:0,-54.4864,-581.034	0/1:54:30,24:30:1080:24:852:-60.6919,0,-81.2576	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/1:62:33,29:33:1173:29:1040:-75.2496,0,-87.2117	0/0:96:96,0:96:3433:0:0:0,-28.8989,-309.174	0/1:74:44,30:44:1565:30:1076:-74.8734,0,-118.863	0/0:83:83,0:83:2969:0:0:0,-24.9855,-267.441	0/1:40:21,19:21:741:19:684:-49.8422,0,-54.9704	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/1:44:27,17:27:968:17:612:-42.1681,0,-74.192	0/1:71:36,35:36:1292:35:1260:-92.0098,0,-95.2106	0/1:41:17,24:17:608:24:864:-65.7357,0,-42.7098	0/1:27:18,9:18:648:9:324:-21.3698,0,-50.5241	0/1:18:13,5:13:468:5:176:-10.7597,0,-37.0411	0/0:24:24,0:24:852:0:0:0,-7.22472,-77.0004	0/1:242:124,118:124:4444:118:4208:-305.856,0,-327.274	0/0:102:102,0:102:3653:0:0:0,-30.7051,-328.972	0/1:46:16,30:16:557:30:1061:-81.9469,0,-36.6082	0/1:70:43,27:43:1529:27:968:-66.3606,0,-116.699	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.122	0/1:223:101,122:101:3632:122:4345:-324.055,0,-259.954	0/1:171:94,77:94:3368:77:2758:-196.97,0,-251.803	0/1:25:8,17:8:288:17:597:-46.5304,0,-18.7417	0/1:236:124,112:124:4448:112:3960:-285.481,0,-328.957	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/1:66:38,28:38:1360:28:1008:-71.166,0,-102.833	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:14:12,2:12:432:2:72:-2.6223,0,-35.0068	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:13:4,9:4:144:9:309:-24.0354,0,-9.40023	0/1:125:62,63:62:2228:63:2209:-161.436,0,-163.155	0/0:68:68,0:68:2429:0:0:0,-20.47,-218.863	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:126:126,0:126:4501:0:0:0,-37.9298,-405.258	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.229	0/1:89:43,46:43:1544:46:1641:-121.163,0,-112.461	0/1:42:22,20:22:788:20:720:-52.4717,0,-58.6015	0/1:43:20,23:20:720:23:828:-60.8767,0,-52.1845	0/1:138:74,64:74:2622:64:2269:-162.926,0,-194.683	0/1:109:64,45:64:2285:45:1620:-112.872,0,-173.098	0/0:170:170,0:170:6116:0:0:0,-51.1751,-550.347	0/0:81:80,1:80:2861:1:36:0,-20.7852,-254.127	0/1:81:44,37:44:1561:37:1316:-94.3584,0,-116.396	0/0:95:94,0:94:3372:0:0:0,-28.2968,-303.336	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.937	0/0:48:48,0:48:1705:0:0:0,-14.4494,-153.734	0/1:13:3,10:3:108:10:356:-28.4679,0,-6.16178	0/0:120:120,0:120:4300:0:0:0,-36.1236,-386.335	0/1:25:13,12:13:468:12:432:-31.6954,0,-34.9339	0/1:12:5,7:5:180:7:237:-18.0467,0,-12.9397	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:81:37,44:37:1309:44:1580:-118.091,0,-93.7261	0/1:57:25,32:25:900:32:1129:-84.7529,0,-64.1623	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/1:133:70,63:70:2512:63:2226:-160.541,0,-186.287	0/0:140:140,0:140:5010:0:0:0,-42.1442,-451.043	0/1:48:29,19:29:1013:19:680:-47.0347,0,-77.0253	0/0:90:90,0:90:3213:0:0:0,-27.0927,-289.391	0/1:94:49,45:49:1726:45:1595:-114.711,0,-127.324	0/0:75:75,0:75:2677:0:0:0,-22.5772,-241.16	0/0:19:18,1:18:648:1:36:0,-2.12129,-55.0536	0/0:41:40,1:40:1417:1:36:0,-8.74395,-124.227	0/1:52:28,24:28:1008:24:864:-62.4281,0,-75.3828	0/1:21:8,13:8:288:13:449:-34.3267,0,-19.9458	0/0:111:111,0:111:3981:0:0:0,-33.4143,-358.478	0/1:51:34,17:34:1220:17:582:-37.3287,0,-94.6671	0/0:108:107,1:107:3840:1:36:0,-28.913,-342.18	0/0:95:95,0:95:3397:0:0:0,-28.5978,-305.943	0/1:141:84,57:84:2990:57:2025:-139.636,0,-226.884	0/0:64:64,0:64:2270:0:0:0,-19.2659,-204.551	0/1:9:7,2:7:248:2:72:-4.12745,0,-19.9549	0/0:64:63,1:63:2248:1:36:0,-15.6676,-198.985	0/1:79:50,29:50:1792:29:1040:-69.1938,0,-137.781	0/0:216:216,0:216:7719:0:0:0,-65.0225,-694.653	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.424	0/1:33:10,23:10:360:23:824:-64.5493,0,-22.8103	0/0:84:83,1:83:2980:1:36:0,-21.6882,-264.833	0/1:26:13,13:13:468:13:468:-34.6329,0,-34.6329	0/1:49:20,29:20:720:29:1036:-78.7577,0,-50.3783	0/0:47:47,0:47:1673:0:0:0,-14.1484,-150.855	0/1:25:11,14:11:396:14:504:-38.1022,0,-28.457	0/1:33:18,15:18:648:15:540:-38.9841,0,-48.7179	0/1:48:24,24:24:860:24:864:-63.6275,0,-63.2724	0/0:88:88,0:88:3149:0:0:0,-26.4906,-283.633	0/0:67:67,0:67:2412:0:0:0,-20.169,-217.336
chr09	20732988	.	GGGA	AGGA,AGGG	639242	PASS	AB=0.505327,0.490134;ABP=5.67058,12.1365;AC=135,53;AF=0.718085,0.281915;AN=188;AO=18066,5348;CIGAR=1X3M,1X2M1X;DP=23513;DPB=23557.2;DPRA=0,1.26428;EPP=39215.5,11616;EPPR=39.9253;GTI=2;LEN=1,4;MEANALT=2.55319,2.85333;MQM=59.9112,59.7612;MQMR=58.7059;NS=94;NUMALT=2;ODDS=2.29144;PAIRED=0,0;PAIREDR=0;PAO=41,41;PQA=1434.5,1434.5;PQR=862;PRO=70;QA=642930,186117;QR=578;RO=17;RPL=9763,2517;RPP=259.221,43.0437;RPPR=4.1599;RPR=8303,2831;RUN=1,1;SAF=9763,2517;SAP=259.221,43.0437;SAR=8303,2831;SRF=10;SRP=4.1599;SRR=7;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:92:0,92,0:0:0:92,0:3259,0:-293.152,-27.6948,0,-293.152,-27.6948,-293.152	1/1:344:0,341,2:0:0:341,2:12172,70:-1095.01,-102.651,0,-1089.31,-96.8892,-1088.71	1/1:637:0,634,1:0:0:634,1:22555,36:-2028.89,-190.853,0,-2025.95,-187.891,-2025.65	1/1:546:0,544,2:0:0:544,2:19411,72:-1746.1,-163.76,0,-1740.22,-157.912,-1739.62	1/2:58:0,31,27:0:0:31,27:1095,939:-165.802,-76.6148,-67.2828,-89.4492,0,-81.3214	1/2:131:0,57,74:0:0:57,74:2027,2556:-373.146,-207.954,-190.795,-165.484,0,-143.208	1/2:325:0,183,140:0:0:183,140:6502,4870:-925.688,-395.883,-340.795,-529.85,0,-487.706	1/1:391:0,391,0:0:0:391,0:13905,0:-1251.15,-117.703,0,-1251.15,-117.703,-1251.15	1/2:389:0,222,158:0:0:222,158:7900,5464:-1087.75,-443.898,-377.069,-643.92,0,-596.357	1/1:268:0,267,0:0:0:267,0:9490,0:-853.708,-80.375,0,-853.708,-80.375,-853.708	1/2:156:0,71,85:0:0:71,85:2523,2974:-447.348,-241.751,-220.378,-205.949,0,-180.361	1/1:221:0,221,0:0:0:221,0:7851,0:-706.287,-66.5276,0,-706.287,-66.5276,-706.287	1/1:169:1,167,1:1:36:167,1:5918,36:-529.127,-47.3345,0,-526.492,-47.3355,-529.128	1/2:193:1,94,97:1:36:94,97:3282,3365:-537.264,-270.611,-245.252,-264.053,0,-237.791	1/2:202:1,103,98:1:36:103,98:3645,3430:-572.714,-276.116,-248.048,-293.953,0,-267.389	1/2:160:0,66,93:0:0:66,93:2341,3231:-453.571,-262.841,-242.973,-190.9,0,-162.904	1/2:169:0,91,78:0:0:91,78:3244,2684:-482.362,-217.926,-190.533,-264.39,0,-240.91	1/2:142:0,73,68:0:0:73,68:2588,2387:-405.225,-194.45,-172.475,-210.955,0,-190.485	1/1:97:0,97,0:0:0:97,0:3456,0:-311.251,-29.1999,0,-311.251,-29.1999,-311.251	1/2:453:0,223,227:0:0:223,227:7938,7949:-1293.87,-646.907,-579.777,-647.127,0,-578.793	1/1:412:1,408,1:1:36:408,1:14565,36:-1307.05,-119.873,0,-1304.42,-119.873,-1307.05	1/2:217:0,81,134:0:0:81,134:2908,4612:-611.816,-374.608,-350.225,-237.268,0,-196.93	1/2:266:1,145,120:1:30:145,120:5130,4117:-748.73,-331.204,-289.952,-415.476,0,-381.751	1/1:266:1,263,1:1:36:263,1:9393,35:-841.754,-76.2085,0,-839.209,-76.3051,-841.846	1/1:202:0,202,0:0:0:202,0:7201,0:-648.147,-60.8081,0,-648.147,-60.8081,-648.147	1/2:662:0,366,296:0:0:366,296:13053,10261:-1897.95,-833.905,-723.728,-1063.98,0,-974.874	1/2:778:0,366,408:0:0:366,408:13070,14211:-2219.42,-1154.23,-1044.06,-1065.26,0,-942.444	1/2:99:0,47,52:0:0:47,52:1676,1812:-284.327,-147.704,-133.556,-136.975,0,-121.322	1/2:563:0,259,302:0:0:259,302:9233,10529:-1608.84,-856.249,-778.282,-752.586,0,-661.675	1/1:289:4,284,1:4:143:284,1:10121,36:-897.592,-73.8345,0,-895.859,-82.5546,-907.218	1/2:243:0,135,107:0:0:135,107:4820,3728:-696.265,-303.301,-262.662,-393.105,0,-360.895	1/1:24:0,24,0:0:0:24,0:860,0:-77.7218,-7.22472,0,-77.7218,-7.22472,-77.7218	1/2:60:0,24,36:0:0:24,36:860,1247:-171.796,-101.669,-94.4447,-70.4795,0,-59.6424	2/2:10:0,1,9:0:0:1,9:27,322:-29.0436,-26.9236,-26.6226,-2.70927,-0.310517,0	1/1:29:0,29,0:0:0:29,0:1031,0:-93.1026,-8.72987,0,-93.1026,-8.72987,-93.1026	1/2:44:0,26,18:0:0:26,18:923,638:-127.173,-51.968,-44.1412,-75.2003,0,-69.7818	1/2:467:0,224,241:0:0:224,241:7938,8383:-1328.2,-681.552,-614.121,-646.654,0,-574.106	1/1:284:0,283,0:0:0:283,0:10065,0:-905.63,-85.1915,0,-905.63,-85.1915,-905.63	1/1:144:0,144,0:0:0:144,0:5102,0:-459.297,-43.3483,0,-459.297,-43.3483,-459.297	1/2:4:0,2,2:0:0:2,2:72,72:-12.1095,-6.23466,-5.6326,-6.23466,0,-5.6326	1/1:449:1,440,8:1:35:440,8:15651,277:-1404.55,-129.603,0,-1382.35,-109.861,-1382.79	1/1:84:2,82,0:2:61:82,0:2934,0:-258.463,-19.8749,0,-259.065,-24.6845,-263.95	1/2:337:0,169,168:0:0:169,168:6019,5878:-968.598,-478.199,-427.325,-490.392,0,-439.819	1/2:165:0,80,83:0:0:80,83:2868,2934:-472.929,-239.01,-214.928,-233.973,0,-208.988	1/2:160:0,82,78:0:0:82,78:2910,2706:-457.34,-220.24,-195.555,-237.385,0,-213.905	1/2:319:0,168,151:0:0:168,151:5992,5273:-917.394,-428.934,-378.361,-488.502,0,-443.046	1/2:271:0,146,123:0:0:146,123:5162,4265:-766.937,-346.576,-302.626,-420.351,0,-383.324	1/1:575:0,567,4:0:0:567,4:20222,144:-1819.07,-170.684,0,-1807.32,-158.87,-1806.12	1/1:314:1,312,0:1:33:312,0:11088,0:-994.492,-91.2132,0,-994.793,-93.9214,-997.462	1/2:205:0,100,105:0:0:100,105:3566,3693:-591.06,-300.637,-270.534,-290.533,0,-258.925	1/1:460:0,459,0:0:0:459,0:16310,0:-1467.22,-138.173,0,-1467.22,-138.173,-1467.22	1/2:16:0,4,12:0:0:4,12:144,412:-45.5504,-33.7966,-32.5925,-12.1095,0,-8.49714	1/1:467:0,466,1:0:0:466,1:16607,32:-1494.1,-140.28,0,-1491.52,-137.615,-1491.22	1/1:120:0,120,0:0:0:120,0:4250,0:-382.409,-36.1236,0,-382.409,-36.123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chr09	21677661	.	C	T	92312.7	PASS	AB=0.524476;ABP=42.7664;AC=51;AF=0.271277;AN=188;AO=4040;CIGAR=1X;DP=16703;DPB=16703;DPRA=1.09747;EPP=8775.76;EPPR=27461.3;GTI=0;LEN=1;MEANALT=1.08571;MQM=59.8891;MQMR=59.964;NS=94;NUMALT=1;ODDS=1.57224;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=143770;QR=445770;RO=12653;RPL=1876;RPP=47.5921;RPPR=250.551;RPR=2164;RUN=1;SAF=1876;SAP=47.5921;SAR=2164;SRF=5724;SRP=252.203;SRR=6929;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:69:69,0:69:2445:0:0:0,-20.7711,-220.303	0/0:80:80,0:80:2860:0:0:0,-24.0824,-257.638	0/0:83:83,0:83:2968:0:0:0,-24.9855,-267.353	0/0:450:447,1:447:15797:1:36:0,-131.623,-1417.85	0/1:86:49,37:49:1703:37:1328:-93.9337,0,-127.576	0/1:51:29,22:29:1028:22:788:-55.8923,0,-77.4805	0/1:225:81,144:81:2856:144:5117:-392.94,0,-189.544	0/1:143:83,60:83:2932:60:2137:-149.547,0,-221.058	0/1:156:83,72:83:2934:72:2580:-184.47,0,-217.424	0/0:290:289,1:289:10223:1:36:0,-83.7004,-916.394	0/1:146:63,83:63:2188:83:2950:-221.783,0,-153.235	0/0:115:115,0:115:4016:0:0:0,-34.6184,-361.626	0/0:95:95,0:95:3342:0:0:0,-28.5978,-301.001	0/0:185:184,0:184:6519:0:0:0,-55.3895,-586.582	0/1:214:111,103:111:3928:103:3688:-267.701,0,-289.294	0/1:174:77,97:77:2704:97:3447:-257.98,0,-191.228	0/1:40:20,20:20:695:20:712:-52.3621,0,-50.8302	0/1:56:29,27:29:1036:27:964:-70.2111,0,-76.6962	0/0:35:34,1:34:1182:1:36:0,-6.93777,-103.085	0/0:281:279,1:279:9827:1:36:0,-81.0498,-880.79	0/0:383:382,1:382:13575:1:36:0,-111.696,-1217.95	0/1:135:47,88:47:1652:88:3121:-240.478,0,-108.326	0/1:200:83,117:83:2933:117:4151:-313.561,0,-203.999	0/0:182:180,2:180:6387:2:72:0,-47.9507,-568.089	0/0:115:115,0:115:4077:0:0:0,-34.6184,-367.118	0/0:636:635,1:635:22382:1:36:0,-187.857,-2010.23	0/1:392:193,199:193:6825:199:7132:-523.924,0,-496.322	0/1:93:42,51:42:1479:51:1832:-137.162,0,-105.408	0/0:280:277,3:277:9800:3:108:0,-74.2132,-871.876	0/0:314:312,2:312:11062:2:72:0,-87.6867,-988.647	0/1:312:163,149:163:5715:149:5318:-384.833,0,-420.553	0/0:14:14,0:14:482:0:0:0,-4.21442,-43.7061	0/1:29:12,17:12:424:17:599:-45.5067,0,-29.7619	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/0:9:9,0:9:307:0:0:0,-2.70927,-27.914	0/1:11:3,8:3:108:8:280:-22.228,0,-6.76384	0/1:478:236,242:236:8240:242:8537:-624.442,0,-597.733	0/0:341:341,0:341:12123:0:0:0,-102.651,-1090.82	0/0:76:76,0:76:2673:0:0:0,-22.8783,-240.816	0/1:13:6,7:6:212:7:248:-18.7508,0,-15.5114	0/1:293:125,168:125:4446:168:5967:-448.929,0,-312.111	0/0:100:100,0:100:3514:0:0:0,-30.103,-316.475	0/1:235:106,128:106:3776:128:4572:-340.824,0,-269.233	0/1:196:94,102:94:3264:102:3621:-267.085,0,-234.979	0/1:178:89,89:89:3108:89:3109:-226.441,0,-226.364	0/1:255:139,116:139:4917:116:4159:-297.729,0,-365.92	0/1:96:56,40:56:1957:40:1429:-100.005,0,-147.503	0/0:281:279,1:279:9728:1:36:0,-81.0499,-871.846	0/0:146:146,0:146:5113:0:0:0,-43.9504,-460.316	0/1:300:148,152:148:5272:152:5421:-397.711,0,-384.307	0/0:168:168,0:168:5872:0:0:0,-50.573,-528.591	0/1:16:10,6:10:360:6:212:-14.6083,0,-27.9278	0/0:57:57,0:57:2007:0:0:0,-17.1587,-180.9	0/1:152:78,74:78:2776:74:2620:-190.29,0,-204.326	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/0:264:264,0:264:9285:0:0:0,-79.4719,-835.136	0/1:82:48,34:48:1705:34:1212:-84.7019,0,-129.049	0/1:19:5,14:5:180:14:491:-38.8015,0,-10.8325	0/1:23:11,12:11:392:12:428:-31.9351,0,-28.6964	0/1:193:90,103:90:3188:103:3667:-272.136,0,-229.048	0/0:239:237,2:237:8339:2:72:0,-65.1094,-743.693	0/1:12:4,8:4:144:8:288:-22.655,0,-9.70126	0/1:311:137,174:137:4835:174:6194:-463.939,0,-341.129	0/0:272:268,4:268:9423:4:144:0,-69.1377,-835.142	0/1:124:72,52:72:2555:52:1856:-129.992,0,-192.873	0/0:174:174,0:174:6166:0:0:0,-52.3792,-555.042	0/1:461:220,241:220:7802:241:8589:-634.233,0,-563.441	0/0:267:264,3:264:9326:3:108:0,-70.2998,-829.235	0/0:82:80,2:80:2765:2:72:0,-17.8477,-242.254	0/0:106:105,1:105:3747:1:36:0,-28.3506,-333.854	0/1:204:109,95:109:3790:95:3374:-242.463,0,-279.893	0/1:46:19,27:19:654:27:956:-72.5084,0,-45.3327	0/0:136:134,2:134:4739:2:72:0,-34.1034,-419.835	0/1:95:44,51:44:1542:51:1823:-135.75,0,-110.47	0/0:581:580,0:580:20510:0:0:0,-174.597,-1844.91	0/0:207:207,0:207:7256:0:0:0,-62.3132,-653.103	0/1:142:65,77:65:2286:77:2718:-202.029,0,-163.253	0/0:113:112,1:112:3980:1:36:0,-30.4181,-354.792	0/1:6:2,4:2:68:4:140:-11.1384,0,-4.65153	0/1:165:89,76:89:3151:76:2724:-195.711,0,-234.147	0/1:139:64,75:64:2266:75:2673:-198.965,0,-162.221	0/0:389:388,1:388:13651:1:32:0,-113.901,-1225.19	0/0:215:215,0:215:7447:0:0:0,-64.7214,-670.271	0/0:203:203,0:203:7147:0:0:0,-61.1091,-643.295	0/1:259:129,129:129:4527:129:4581:-334.428,0,-329.576	0/0:351:348,3:348:12126:3:108:0,-95.5864,-1081.14	0/1:28:11,17:11:374:17:608:-46.6165,0,-25.5576	0/1:79:44,35:44:1534:35:1252:-89.2037,0,-114.569	0/0:93:93,0:93:3260:0:0:0,-27.9958,-293.578	0/1:120:44,76:44:1531:76:2716:-208.449,0,-101.958	0/1:259:107,152:107:3754:152:5403:-408.424,0,-260.096	0/1:187:56,131:56:1931:131:4638:-361.292,0,-117.769	0/0:245:244,0:244:8527:0:0:0,-73.4513,-766.998	0/0:341:341,0:341:11938:0:0:0,-102.651,-1074.3
chr09	21677679	.	T	C	153781	PASS	AB=0.494511;ABP=4.13078;AC=136;AF=0.723404;AN=188;AO=7041;CIGAR=1X;DP=9229;DPB=9229;DPRA=16.5287;EPP=14427.7;EPPR=4400.1;GTI=4;LEN=1;MEANALT=1.06452;MQM=59.9257;MQMR=59.8185;NS=94;NUMALT=1;ODDS=0.764983;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=251880;QR=78374;RO=2182;RPL=6940;RPP=14427.7;RPPR=4400.1;RPR=101;RUN=1;SAF=0;SAP=15292.3;SAR=7041;SRF=0;SRP=4741.16;SRR=2182;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:67:0,67:0:0:67:2391:-215.446,-20.169,0	1/1:81:0,81:0:0:81:2907:-261.864,-24.3834,0	1/1:82:0,82:0:0:82:2929:-263.843,-24.6845,0	1/1:280:0,280:0:0:280:10043:-903.802,-84.2884,0	0/1:25:11,14:11:396:14:500:-37.7228,0,-28.457	0/1:51:23,28:23:824:28:1004:-75.3233,0,-59.1308	0/1:98:62,36:62:2224:36:1287:-86.6319,0,-170.923	0/1:143:60,83:60:2156:83:2957:-223.309,0,-151.256	0/1:159:74,85:74:2664:85:3038:-225.786,0,-191.034	1/1:110:0,109:0:0:109:3904:-351.194,-32.8123,0	0/1:73:39,34:39:1396:34:1224:-88.4919,0,-103.935	1/1:112:0,112:0:0:112:4018:-361.792,-33.7154,0	1/1:97:0,97:0:0:97:3480:-313.411,-29.1999,0	1/1:70:0,70:0:0:70:2503:-225.503,-21.0721,0	0/1:116:58,58:58:2084:58:2088:-153.27,0,-152.909	0/1:91:58,33:58:2088:33:1176:-78.754,0,-160.721	0/1:38:18,20:18:648:20:720:-53.6896,0,-47.2094	0/1:57:26,31:26:932:31:1116:-83.593,0,-67.0301	1/1:38:1,37:1:36:37:1328:-116.224,-7.84087,0	1/1:174:1,173:1:36:173:6193:-553.864,-48.7809,0	1/1:183:0,183:0:0:183:6552:-589.633,-55.0885,0	0/1:94:57,37:57:2052:37:1332:-91.8856,0,-156.655	0/1:129:73,56:73:2628:56:2012:-142.52,0,-197.926	1/1:54:2,52:2:72:52:1864:-161.203,-9.4189,0	1/1:87:0,87:0:0:87:3049:-274.638,-26.1896,0	1/1:229:0,229:0:0:229:8215:-739.359,-68.9359,0	0/1:249:121,128:121:4348:128:4580:-337.4,0,-316.507	0/1:53:25,28:25:900:28:999:-74.2699,0,-65.3633	1/1:170:0,170:0:0:170:6078:-547.112,-51.1751,0	1/1:101:1,100:1:36:100:3584:-319.168,-26.8058,0	0/1:148:49,99:49:1760:99:3546:-274.796,0,-114.131	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:24:15,9:15:540:9:324:-22.2765,0,-41.7103	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:13:9,4:9:316:4:144:-9.40023,0,-24.8655	0/1:206:104,101:104:3736:101:3610:-263.18,0,-274.516	1/1:102:0,102:0:0:102:3656:-329.158,-30.7051,0	1/1:76:0,76:0:0:76:2709:-244.053,-22.8783,0	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/1:124:63,61:63:2253:61:2186:-159.678,0,-165.692	1/1:52:0,52:0:0:52:1856:-167.32,-15.6536,0	0/1:108:51,57:51:1832:57:2036:-150.983,0,-132.63	0/1:87:45,41:45:1616:41:1463:-105.717,0,-119.412	0/1:75:37,38:37:1332:38:1360:-100.123,0,-97.5906	0/1:140:63,77:63:2268:77:2764:-206.857,0,-162.238	0/1:98:44,54:44:1576:54:1927:-144.205,0,-112.62	1/1:145:1,144:1:36:144:5122:-457.427,-40.0511,0	1/1:88:0,88:0:0:88:3160:-284.622,-26.4906,0	0/1:168:76,92:76:2728:92:3308:-247.364,0,-195.189	1/1:63:0,63:0:0:63:2260:-203.663,-18.9649,0	0/1:6:2,4:2:68:4:144:-11.5074,0,-4.65153	1/1:57:0,57:0:0:57:2044:-184.232,-17.1587,0	0/1:117:48,69:48:1713:69:2455:-185.984,0,-119.233	0/1:6:3,3:3:104:3:108:-8.26899,0,-7.89663	1/1:153:0,153:0:0:153:5424:-488.278,-46.0576,0	0/1:36:12,24:12:432:24:860:-66.871,0,-28.3841	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:136:63,73:63:2264:73:2616:-194.71,0,-163.082	1/1:105:2,103:2:72:103:3704:-326.724,-24.7714,0	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:146:68,78:68:2444:78:2792:-207.57,0,-176.264	1/1:102:1,101:1:36:101:3592:-319.26,-27.1068,0	0/1:29:9,20:9:324:20:716:-56.0378,0,-20.776	1/1:78:0,78:0:0:78:2777:-250.17,-23.4803,0	0/1:232:131,101:131:4712:101:3612:-255.437,0,-354.397	1/1:179:0,179:0:0:179:6415:-577.398,-53.8844,0	1/1:55:2,53:2:68:53:1892:-164.101,-10.0989,0	1/1:110:0,110:0:0:110:3939:-354.666,-33.1133,0	0/1:57:20,37:20:720:37:1323:-102.213,0,-47.9667	0/1:11:7,4:7:252:4:140:-9.63325,0,-19.7176	1/1:140:2,137:2:72:137:4908:-435.077,-35.2797,0	0/1:95:50,45:50:1796:45:1608:-116.412,0,-133.318	1/1:338:0,338:0:0:338:12081:-1087.05,-101.748,0	1/1:60:0,60:0:0:60:2144:-193.228,-18.0618,0	0/1:146:78,68:78:2800:68:2429:-174.915,0,-208.112	1/1:114:0,114:0:0:114:4084:-367.746,-34.3174,0	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:55:29,26:29:1044:26:912:-65.8154,0,-77.7182	0/1:142:78,64:78:2796:64:2300:-164.449,0,-209.127	1/1:212:0,212:0:0:212:7566:-680.979,-63.8184,0	1/1:64:0,64:0:0:64:2292:-206.541,-19.2659,0	1/1:116:0,115:0:0:115:4111:-369.815,-34.6185,0	0/1:94:49,45:49:1756:45:1612:-117.073,0,-130.025	1/1:178:1,176:1:36:176:6292:-562.764,-50.0439,0	0/1:28:17,11:17:608:11:387:-26.7371,0,-46.6165	0/1:81:36,45:36:1292:45:1607:-120.536,0,-92.199	1/1:95:0,95:0:0:95:3385:-304.854,-28.5979,0	0/1:70:50,20:50:1800:20:720:-44.0567,0,-141.1	0/1:107:72,35:72:2592:35:1256:-81.1351,0,-201.188	0/1:87:63,24:63:2268:24:860:-51.5322,0,-178.188	1/1:127:0,127:0:0:127:4551:-409.755,-38.2308,0	1/1:179:0,179:0:0:179:6424:-578.245,-53.8844,0
chr09	21707485	.	T	C	31344.6	PASS	AB=0.480116;ABP=16.05;AC=51;AF=0.271277;AN=188;AO=1835;CIGAR=1X;DP=8701;DPB=8701;DPRA=0.811742;EPP=3507.95;EPPR=13581.6;GTI=2;LEN=1;MEANALT=1.03333;MQM=58.9924;MQMR=59.2473;NS=94;NUMALT=1;ODDS=1.5303;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=64955;QR=245110;RO=6863;RPL=57;RPP=3507.95;RPPR=13581.6;RPR=1778;RUN=1;SAF=1835;SAP=3987.66;SAR=0;SRF=6863;SRP=14905.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8267	0/0:112:112,0:112:4012:0:0:0,-33.7154,-361.099	0/0:166:165,1:165:5894:1:36:0,-46.4683,-526.919	0/0:198:198,0:198:7049:0:0:0,-59.6039,-633.768	0/1:66:28,38:28:1004:38:1343:-101.144,0,-70.3515	0/1:33:15,18:15:540:18:644:-48.3281,0,-38.9669	0/1:101:45,56:45:1600:56:1951:-145.33,0,-113.883	0/1:161:95,66:95:3412:66:2342:-162.513,0,-257.032	0/1:76:40,36:40:1431:36:1266:-91.3064,0,-106.148	0/0:99:99,0:99:3538:0:0:0,-29.802,-318.443	0/1:48:26,22:26:914:22:774:-55.5144,0,-68.1215	0/0:54:54,0:54:1925:0:0:0,-16.2556,-173.427	0/0:62:62,0:62:2224:0:0:0,-18.6639,-200.328	0/0:64:64,0:64:2261:0:0:0,-19.2659,-203.687	0/1:55:26,29:26:936:29:1018:-75.3341,0,-67.9744	0/1:54:29,25:29:1027:25:877:-62.8844,0,-76.4866	0/1:73:42,31:42:1512:31:1104:-77.6638,0,-114.1	0/1:60:22,38:22:792:38:1340:-102.75,0,-53.487	0/0:32:32,0:32:1130:0:0:0,-9.63296,-101.972	0/0:220:220,0:220:7832:0:0:0,-66.2266,-704.754	0/0:83:83,0:83:2946:0:0:0,-24.9855,-264.593	0/1:138:73,65:73:2624:65:2289:-164.566,0,-194.806	0/1:38:22,15:22:788:15:536:-37.0423,0,-59.7185	0/0:102:102,0:102:3640:0:0:0,-30.7051,-327.679	0/0:94:94,0:94:3368:0:0:0,-28.2968,-303.194	0/0:287:287,0:287:10252:0:0:0,-86.3956,-921.98	0/1:173:93,79:93:3315:79:2800:-199.999,0,-246.194	0/1:15:10,5:10:360:5:157:-9.91226,0,-28.2289	0/0:248:246,2:246:8793:2:61:0,-68.9407,-785.374	0/0:139:139,0:139:4970:0:0:0,-41.8432,-446.02	0/1:127:67,60:67:2396:60:2112:-151.82,0,-177.44	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/1:21:10,11:10:360:11:396:-29.6611,0,-26.3936	0/1:21:10,11:10:347:11:396:-29.5977,0,-25.2134	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:163:91,72:91:3225:72:2541:-179.708,0,-240.327	0/0:191:191,0:191:6846:0:0:0,-57.4967,-614.563	0/0:41:41,0:41:1463:0:0:0,-12.3422,-131.931	0/1:6:2,4:2:72:4:140:-11.1384,0,-5.03054	0/1:121:57,64:57:2044:64:2247:-165.478,0,-147.71	0/0:35:35,0:35:1252:0:0:0,-10.536,-112.985	0/1:95:55,40:55:1972:40:1421:-99.5155,0,-148.174	0/1:52:32,20:32:1148:20:716:-49.0823,0,-87.9171	0/1:71:39,32:39:1366:32:1128:-80.4548,0,-101.791	0/1:93:49,44:49:1752:44:1549:-111.62,0,-129.911	0/1:122:77,45:77:2722:45:1590:-106.572,0,-208.283	0/0:189:188,0:188:6692:0:0:0,-56.5936,-601.437	0/0:182:181,1:181:6440:1:36:0,-51.1892,-575.5	0/1:180:103,77:103:3688:77:2729:-191.525,0,-277.585	0/0:162:162,0:162:5767:0:0:0,-48.7669,-517.73	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	0/0:130:130,0:130:4667:0:0:0,-39.1339,-420.014	0/1:26:5,21:5:176:21:738:-58.88,0,-8.35824	0/1:21:11,10:11:387:10:360:-26.4223,0,-28.8157	0/0:127:127,0:127:4556:0:0:0,-38.2308,-409.693	0/1:30:10,20:10:360:20:712:-55.3473,0,-23.7134	0/1:16:10,6:10:356:6:216:-14.9706,0,-27.5648	0/1:25:13,12:13:464:12:426:-31.046,0,-34.5718	0/1:40:18,22:18:648:22:784:-58.7858,0,-46.6107	0/0:105:105,0:105:3754:0:0:0,-31.6081,-337.137	0/1:19:13,6:13:464:6:216:-14.0421,0,-36.3773	0/1:283:149,134:149:5316:134:4776:-344.111,0,-393.276	0/0:178:177,1:177:6322:1:36:0,-49.9851,-564.945	0/1:66:31,35:31:1108:35:1256:-93.4489,0,-80.0052	0/0:78:78,0:78:2772:0:0:0,-23.4803,-249.503	0/1:148:71,77:71:2556:77:2713:-199.777,0,-185.706	0/0:54:53,1:53:1888:1:36:0,-12.6573,-166.482	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0537	0/0:61:61,0:61:2175:0:0:0,-18.3628,-195.956	0/1:88:47,41:47:1692:41:1461:-104.894,0,-125.955	0/1:26:12,14:12:428:14:504:-37.4407,0,-31.032	0/0:154:153,1:153:5460:1:36:0,-42.7918,-487.372	0/1:54:31,23:31:1104:23:820:-57.8384,0,-82.307	0/0:132:129,3:129:4615:3:108:0,-29.7199,-405.31	0/0:226:226,0:226:8097:0:0:0,-68.0328,-728.356	0/1:121:63,58:63:2243:58:2080:-151.017,0,-165.649	0/0:143:143,0:143:5127:0:0:0,-43.0473,-461.227	0/1:22:12,10:12:432:10:356:-25.7469,0,-32.5985	0/1:109:51,58:51:1810:58:2054:-152.261,0,-130.146	0/1:161:85,76:85:3035:76:2695:-194.243,0,-224.877	0/0:173:173,0:173:6168:0:0:0,-52.0782,-554.641	0/0:91:90,1:90:3224:1:36:0,-23.7955,-286.747	0/0:61:61,0:61:2168:0:0:0,-18.3628,-195.356	0/1:81:39,42:39:1383:42:1473:-108.289,0,-100.373	0/0:122:121,1:121:4327:1:36:0,-33.1274,-385.866	0/1:45:26,19:26:936:19:671:-47.1125,0,-70.9847	0/1:61:29,32:29:1036:32:1128:-83.4369,0,-75.1849	0/0:55:55,0:55:1971:0:0:0,-16.5566,-177.635	0/1:49:27,22:27:968:22:779:-55.59,0,-72.5721	0/1:59:28,31:28:999:31:1103:-81.7739,0,-72.4637	0/1:64:23,41:23:824:41:1447:-111.246,0,-55.2159	0/0:95:95,0:95:3403:0:0:0,-28.5978,-306.107	0/0:79:79,0:79:2822:0:0:0,-23.7814,-253.588
chr09	21707493	.	CCAAT	GCAAA,CCAAA	187303	PASS	AB=0.520741,0.475085;ABP=17.3325,23.6775;AC=137,51;AF=0.728723,0.271277;AN=188;AO=6942,1827;CIGAR=1X3M1X,4M1X;DP=8828;DPB=8828.8;DPRA=0,0.709127;EPP=15077.4,3970.29;EPPR=7.35324;GTI=3;LEN=5,1;MEANALT=2.12766,2.29825;MQM=59.2048,59.093;MQMR=60;NS=94;NUMALT=2;ODDS=2.52469;PAIRED=0,0;PAIREDR=0;PAO=3,0.5;PQA=108,0;PQR=0;PRO=0.5;QA=245260,65249;QR=65;RO=2;RPL=6942,1827;RPP=15077.4,3970.29;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=6942,1827;SAP=15077.4,3970.29;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:26:0,23,0:0:0:23,0:813,0:-73.1273,-6.92369,0,-73.1273,-6.92369,-73.1273	1/1:114:0,113,0:0:0:113,0:4009,0:-360.474,-34.0164,0,-360.474,-34.0164,-360.474	1/1:170:0,169,0:0:0:169,0:5925,0:-532.769,-50.8741,0,-532.769,-50.8741,-532.769	1/1:203:0,201,0:0:0:201,0:7103,0:-638.158,-60.507,0,-638.158,-60.507,-638.158	1/2:65:0,28,37:0:0:28,37:977,1332:-187.927,-108.887,-100.458,-79.3926,0,-68.2544	1/2:32:0,15,17:0:0:15,17:520,608:-92.1484,-49.906,-45.3906,-42.5939,0,-37.4764	1/2:104:0,46,58:0:0:46,58:1635,2084:-303.393,-170.188,-156.341,-133.561,0,-116.102	1/2:167:0,98,68:0:0:98,68:3447,2440:-478.203,-198.965,-169.464,-279.233,0,-258.763	1/2:77:0,41,36:0:0:41,36:1450,1288:-223.361,-105.324,-92.9813,-118.393,0,-107.556	1/1:101:0,101,0:0:0:101,0:3596,0:-323.36,-30.404,0,-323.36,-30.404,-323.36	1/2:47:0,26,21:0:0:26,21:926,752:-137.11,-61.6584,-53.8316,-75.8085,0,-69.4869	1/1:55:0,55,0:0:0:55,0:1929,0:-173.821,-16.5567,0,-173.821,-16.5567,-173.821	1/1:63:0,63,0:0:0:63,0:2219,0:-199.9,-18.9649,0,-199.9,-18.9649,-199.9	1/1:63:0,63,0:0:0:63,0:2224,0:-200.377,-18.9649,0,-200.377,-18.9649,-200.377	1/2:54:0,27,27:0:0:27,27:955,972:-157.359,-79.607,-71.4792,-78.1083,0,-69.9805	1/2:53:0,29,24:0:0:29,24:1018,845:-151.572,-68.7226,-59.9928,-82.8413,0,-75.6166	1/2:75:0,42,32:0:0:42,32:1473,1140:-212.624,-92.8879,-80.2447,-119.733,0,-110.1	1/2:60:0,22,38:0:0:22,38:766,1341:-171.671,-109.435,-102.813,-62.5849,0,-51.1457	1/1:32:0,32,0:0:0:32,0:1138,0:-102.695,-9.63296,0,-102.695,-9.63296,-102.695	1/1:221:0,221,0:0:0:221,0:7816,0:-703.353,-66.5276,0,-703.353,-66.5276,-703.353	1/1:86:0,86,0:0:0:86,0:3021,0:-271.972,-25.8886,0,-271.972,-25.8886,-271.972	1/2:140:0,74,65:0:0:74,65:2619,2313:-401.265,-187.975,-165.698,-213.357,0,-193.79	1/2:37:0,22,15:0:0:22,15:774,540:-107.38,-44.3863,-37.7637,-63.3499,0,-58.8345	1/1:104:0,102,0:0:0:102,0:3561,0:-320.299,-30.7051,0,-320.299,-30.7051,-320.299	1/1:96:0,95,0:0:0:95,0:3376,0:-303.607,-28.5979,0,-303.607,-28.5979,-303.607	1/1:288:0,286,0:0:0:286,0:10142,0:-911.776,-86.0946,0,-911.776,-86.0946,-911.776	1/2:173:0,94,79:0:0:94,79:3324,2810:-499.763,-229.225,-200.928,-270.892,0,-247.111	1/2:15:0,10,4:0:0:10,4:357,144:-40.937,-11.8219,-8.81158,-29.1844,0,-27.9803	1/1:253:0,251,0:0:0:251,0:8900,0:-800.018,-75.5585,0,-800.018,-75.5585,-800.018	1/1:141:0,139,0:0:0:139,0:4910,0:-441.638,-41.8432,0,-441.638,-41.8432,-441.638	1/2:124:0,67,56:0:0:67,56:2341,1985:-351.355,-161.122,-140.953,-190.224,0,-173.367	1/1:19:0,19,0:0:0:19,0:680,0:-61.5295,-5.71957,0,-61.5295,-5.71957,-61.5295	1/2:21:0,9,11:0:0:9,11:322,388:-57.8576,-31.5983,-28.889,-26.2662,0,-22.9549	1/2:20:0,10,10:0:0:10,10:356,360:-58.6558,-29.6705,-26.6602,-29.3426,0,-26.3323	1/1:11:0,11,0:0:0:11,0:394,0:-35.8016,-3.31133,0,-35.8016,-3.31133,-35.8016	1/2:6:0,3,3:0:0:3,3:108,108:-17.9843,-9.17208,-8.26899,-9.17208,0,-8.26899	1/2:164:0,92,72:0:0:92,72:3240,2592:-474.089,-211.269,-183.574,-263.176,0,-241.502	1/1:195:0,192,0:0:0:192,0:6787,0:-609.687,-57.7978,0,-609.687,-57.7978,-609.687	1/1:43:0,43,0:0:0:43,0:1523,0:-137.328,-12.9443,0,-137.328,-12.9443,-137.328	1/2:6:0,2,4:0:0:2,4:72,140:-17.6186,-11.7405,-11.1384,-6.23466,0,-5.03054	1/2:124:0,57,66:0:0:57,66:2017,2352:-355.072,-190.871,-173.712,-164.24,0,-144.372	1/1:35:0,34,0:0:0:34,0:1194,0:-107.415,-10.235,0,-107.415,-10.235,-107.415	1/2:96:0,57,39:0:0:57,39:2005,1372:-274.886,-112,-94.8414,-163.237,0,-151.497	1/2:52:0,32,20:0:0:32,20:1146,716:-152.121,-58.7153,-49.0823,-93.7637,0,-87.7431	1/2:71:0,39,32:0:0:39,32:1365,1148:-205,-93.996,-82.2558,-111.359,0,-101.726	1/2:91:0,49,41:0:0:49,41:1723,1465:-259.62,-119.412,-104.662,-140.203,0,-127.86	1/2:122:0,75,46:0:0:75,46:2649,1652:-349.867,-134.278,-111.701,-215.586,0,-201.739	1/1:192:0,190,0:0:0:190,0:6708,0:-602.883,-57.1957,0,-602.883,-57.1957,-602.883	1/1:187:0,186,1:0:0:186,1:6579,36:-591.395,-55.9916,0,-588.458,-52.6943,-588.157	1/2:185:0,104,81:0:0:104,81:3679,2912:-537.099,-237.767,-206.46,-299.689,0,-275.305	1/1:165:0,161,0:0:0:161,0:5668,0:-509.018,-48.4658,0,-509.018,-48.4658,-509.018	1/2:15:0,7,8:0:0:7,8:243,288:-43.6065,-23.8592,-21.752,-20.1003,0,-17.692	1/1:131:0,129,0:0:0:129,0:4584,0:-412.276,-38.8329,0,-412.276,-38.8329,-412.276	1/2:25:0,5,20:0:0:5,20:173,716:-72.7462,-58.6902,-57.185,-14.4042,0,-8.38358	1/2:22:0,11,10:0:0:11,10:372,345:-58.2944,-28.1388,-24.8274,-30.2615,0,-27.2512	1/1:131:0,128,0:0:0:128,0:4556,0:-409.791,-38.5318,0,-409.791,-38.5318,-409.791	1/2:30:0,10,20:0:0: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chr09	21750242	.	G	A	44619.8	PASS	AB=0.227048;ABP=2491.2;AC=133;AF=0.707447;AN=188;AO=2091;CIGAR=1X;DP=5143;DPB=5143;DPRA=0;EPP=4543.56;EPPR=6606.47;GTI=30;LEN=1;MEANALT=1.03191;MQM=47.7575;MQMR=59.9183;NS=94;NUMALT=1;ODDS=0.336277;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74379;QR=108105;RO=3049;RPL=907;RPP=82.6922;RPPR=26.3424;RPR=1184;RUN=1;SAF=907;SAP=82.6922;SAR=1184;SRF=1434;SRP=26.3424;SRR=1615;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:12:0,12:0:0:12:412:-36.8583,-3.61236,0	0/1:28:3,25:3:108:25:884:-70.9126,0,-1.64633	1/1:44:0,44:0:0:44:1572:-140.99,-13.2453,0	1/1:53:3,50:3:108:50:1771:-146.574,-5.87942,0	0/1:41:31,10:31:1112:10:356:-19.6473,0,-88.0491	0/1:38:33,5:33:1162:5:171:-4.16748,0,-93.4453	0/1:61:39,22:39:1389:22:792:-52.1792,0,-106.944	0/1:121:97,24:97:3444:24:860:-40.4243,0,-273.747	0/1:88:45,43:45:1592:43:1525:-107.191,0,-117.077	1/1:16:0,16:0:0:16:576:-51.61,-4.81648,0	0/1:72:62,10:62:2202:10:347:-9.75036,0,-176.77	1/1:23:0,23:0:0:23:819:-72.553,-6.92369,0	1/1:56:0,56:0:0:56:2008:-179.061,-16.8577,0	1/1:45:0,45:0:0:45:1616:-142.782,-13.5464,0	0/1:94:71,23:71:2541:23:806:-43.8218,0,-200.642	0/1:68:58,10:58:2017:10:356:-11.7067,0,-161.326	0/1:91:68,23:68:2400:23:815:-45.3591,0,-188.858	0/1:84:74,10:74:2602:10:337:-5.24478,0,-209.134	1/1:24:0,24:0:0:24:834:-74.822,-7.22472,0	1/1:13:0,13:0:0:13:466:-41.0361,-3.91339,0	1/1:36:0,36:0:0:36:1288:-115.188,-10.8371,0	0/1:48:41,7:41:1468:7:248:-8.07097,0,-117.967	0/1:79:60,19:60:2148:19:672:-36.4939,0,-169.806	1/1:21:0,21:0:0:21:756:-67.4064,-6.32163,0	1/1:20:0,20:0:0:20:712:-63.8572,-6.0206,0	1/1:67:2,65:2:72:65:2296:-197.199,-13.3323,0	0/1:195:158,37:158:5613:37:1313:-58.8775,0,-446.519	0/0:36:35,1:35:1244:1:32:0,-7.67025,-109.098	1/1:48:1,47:1:36:47:1672:-143.471,-10.8512,0	1/1:20:0,20:0:0:20:716:-64.297,-6.0206,0	0/1:74:62,12:62:2205:12:428:-16.3609,0,-176.437	1/1:8:0,8:0:0:8:284:-25.5503,-2.40824,0	0/0:21:20,1:20:720:1:36:0,-2.73515,-61.5423	0/1:8:4,4:4:144:4:135:-9.99147,0,-10.9054	1/1:6:0,6:0:0:6:216:-19.5724,-1.80618,0	0/1:18:10,8:10:360:8:284:-20.2669,0,-27.3258	0/1:183:147,35:147:5220:35:1248:-55.8843,0,-414.793	1/1:25:0,25:0:0:25:870:-78.0047,-7.52575,0	1/1:18:0,18:0:0:18:635:-57.1161,-5.41854,0	1/1:5:0,5:0:0:5:180:-16.393,-1.50515,0	0/1:116:97,19:97:3461:19:680:-26.2408,0,-276.782	1/1:23:0,23:0:0:23:809:-71.9305,-6.92369,0	0/1:146:117,28:117:4131:28:996:-45.0124,0,-327.949	0/1:87:72,15:72:2546:15:532:-21.6189,0,-203.201	0/1:55:44,11:44:1537:11:396:-18.6216,0,-122.063	0/1:68:60,8:60:2147:8:288:-5.39388,0,-173.027	0/1:78:55,23:55:1962:23:796:-48.1187,0,-153.371	1/1:53:4,49:4:144:49:1737:-141.829,-2.64097,0	1/1:12:0,12:0:0:12:432:-38.7729,-3.61236,0	0/1:147:117,30:117:4165:30:1060:-49.0541,0,-330.753	1/1:15:0,15:0:0:15:523:-46.9052,-4.51545,0	0/1:20:7,13:7:248:13:468:-35.9459,0,-16.6436	1/1:42:0,42:0:0:42:1500:-134.481,-12.6433,0	0/1:62:44,18:44:1546:18:644:-39.0713,0,-120.766	0/0:12:11,1:11:392:1:36:0,-0.0537426,-32.0614	1/1:21:0,21:0:0:21:740:-66.1926,-6.32163,0	0/1:55:46,9:46:1631:9:316:-11.9618,0,-130.52	0/1:16:11,5:11:388:5:180:-11.4974,0,-30.4409	0/1:5:2,3:2:72:3:104:-8.05749,0,-5.33157	0/1:86:74,12:74:2617:12:428:-12.8161,0,-209.885	1/1:41:0,41:0:0:41:1468:-130.815,-12.3422,0	0/1:21:18,3:18:617:3:108:-3.61421,0,-49.5281	0/1:114:88,26:88:3126:26:923:-48.3662,0,-247.249	1/1:40:2,38:2:72:38:1368:-114.976,-5.20448,0	0/1:67:58,8:58:2066:8:288:-5.8631,0,-166.094	1/1:9:0,9:0:0:9:320:-28.8641,-2.70927,0	0/1:164:125,39:125:4416:39:1396:-75.2895,0,-347.467	1/1:21:0,21:0:0:21:737:-65.7741,-6.32163,0	1/1:16:1,15:1:36:15:536:-44.7288,-1.21821,0	1/1:26:0,26:0:0:26:932:-83.7252,-7.82678,0	0/1:97:85,12:85:3024:12:424:-8.71993,0,-243.192	0/1:24:18,6:18:644:6:216:-12.3554,0,-51.0659	1/1:18:0,18:0:0:18:648:-57.4907,-5.41854,0	0/1:94:63,31:63:2245:31:1108:-70.7489,0,-174.014	1/1:48:0,48:0:0:48:1710:-153.06,-14.4494,0	1/1:55:0,55:0:0:55:1972:-176.499,-16.5567,0	0/1:112:94,18:94:3337:18:630:-23.118,0,-266.83	1/1:32:0,32:0:0:32:1135:-101.967,-9.63296,0	0/1:24:17,7:17:608:7:252:-15.6344,0,-47.8273	0/1:100:82,18:82:2913:18:640:-27.3965,0,-232.302	0/1:90:69,21:69:2454:21:756:-39.8212,0,-193.693	1/1:47:0,47:0:0:47:1684:-149.929,-14.1484,0	1/1:31:1,30:1:36:30:1076:-92.4273,-5.73366,0	1/1:37:0,37:0:0:37:1328:-118.961,-11.1381,0	0/1:102:77,25:77:2723:25:892:-49.4826,0,-214.604	0/1:60:11,49:11:392:49:1734:-136.92,0,-17.5583	0/1:46:40,6:40:1404:6:216:-5.77472,0,-112.806	0/1:68:58,10:58:2052:10:352:-11.3085,0,-164.478	1/1:11:0,11:0:0:11:387:-34.9435,-3.31133,0	0/1:85:64,21:64:2258:21:743:-41.1973,0,-177.872	0/1:140:101,39:101:3525:39:1400:-83.2869,0,-275.314	0/1:105:92,13:92:3263:13:464:-9.21079,0,-262.263	1/1:28:0,28:0:0:28:991:-86.8782,-8.42884,0	1/1:43:0,43:0:0:43:1536:-136.971,-12.9443,0
chr09	21750263	.	C	T	50602.7	PASS	AB=0.232552;ABP=2388.76;AC=133;AF=0.707447;AN=188;AO=2142;CIGAR=1X;DP=5169;DPB=5169;DPRA=0;EPP=1211.88;EPPR=1787.05;GTI=26;LEN=1;MEANALT=1;MQM=47.6811;MQMR=59.9336;NS=94;NUMALT=1;ODDS=0.00903788;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76237;QR=106995;RO=3027;RPL=1477;RPP=671.426;RPPR=1209.77;RPR=665;RUN=1;SAF=952;SAP=60.4337;SAR=1190;SRF=1437;SRP=19.8032;SRR=1590;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:10:0,10:0:0:10:356:-31.5715,-3.0103,0	0/1:28:3,25:3:108:25:877:-70.2334,0,-1.64633	1/1:43:0,43:0:0:43:1548:-138.793,-12.9443,0	1/1:54:3,51:3:108:51:1807:-150.75,-6.18045,0	0/1:39:30,9:30:1068:9:324:-17.3922,0,-84.6919	0/1:38:33,5:33:1160:5:171:-4.19191,0,-93.2666	0/1:61:37,24:37:1308:24:847:-57.1064,0,-99.6587	0/1:127:100,27:100:3502:27:964:-47.7603,0,-277.162	0/1:91:47,44:47:1655:44:1563:-110.554,0,-121.843	1/1:17:0,17:0:0:17:612:-54.8036,-5.11751,0	0/1:71:62,9:62:2179:9:315:-7.17592,0,-175.001	1/1:24:0,24:0:0:24:860:-76.1977,-7.22472,0	1/1:56:0,56:0:0:56:2003:-178.633,-16.8577,0	1/1:48:0,48:0:0:48:1705:-150.952,-14.4494,0	0/1:94:70,24:70:2479:24:849:-47.3999,0,-195.065	0/1:68:58,10:58:2072:10:352:-11.3356,0,-166.273	0/1:94:69,25:69:2443:25:887:-50.9137,0,-191.824	0/1:84:73,11:73:2593:11:392:-10.1311,0,-208.325	1/1:26:0,26:0:0:26:905:-81.1451,-7.82678,0	1/1:13:0,13:0:0:13:464:-41.4711,-3.91339,0	1/1:38:0,38:0:0:38:1351:-120.846,-11.4391,0	0/1:46:39,7:39:1368:7:252:-9.02949,0,-109.568	0/1:81:62,19:62:2187:19:672:-35.91,0,-172.713	1/1:21:0,21:0:0:21:737:-65.7598,-6.32163,0	1/1:20:0,20:0:0:20:689:-61.8065,-6.0206,0	1/1:70:2,68:2:72:68:2432:-209.123,-14.2354,0	0/1:197:158,39:158:5566:39:1396:-65.3388,0,-441.736	0/0:36:35,1:35:1244:1:36:0,-7.31607,-108.744	1/1:50:0,50:0:0:50:1771:-155.776,-15.0515,0	1/1:21:0,21:0:0:21:737:-66.1238,-6.32163,0	0/1:74:61,13:61:2162:13:464:-19.5891,0,-172.57	1/1:9:0,9:0:0:9:306:-27.5227,-2.70927,0	0/0:21:20,1:20:707:1:36:0,-2.73515,-60.3681	0/1:8:4,4:4:135:4:144:-10.8153,0,-10.0743	1/1:6:0,6:0:0:6:216:-19.5724,-1.80618,0	0/1:17:10,7:10:356:7:244:-17.0081,0,-27.2637	0/1:179:142,37:142:5019:37:1328:-64.319,0,-397.977	1/1:24:0,24:0:0:24:860:-76.9775,-7.22472,0	1/1:18:0,18:0:0:18:648:-58.2549,-5.41854,0	1/1:5:0,5:0:0:5:180:-16.393,-1.50515,0	0/1:117:97,20:97:3442:20:716:-29.1696,0,-274.774	1/1:23:0,23:0:0:23:813:-72.2849,-6.92369,0	0/1:145:117,28:117:4129:28:995:-45.2352,0,-328.138	0/1:87:71,16:71:2478:16:576:-25.528,0,-197.086	0/1:56:45,11:45:1596:11:387:-17.5158,0,-127.073	0/1:68:60,8:60:2109:8:284:-5.04043,0,-169.605	0/1:76:54,22:54:1919:22:779:-47.1027,0,-150.106	1/1:53:4,49:4:140:49:1737:-141.995,-3.01001,0	1/1:15:0,15:0:0:15:536:-48.0498,-4.51545,0	0/1:147:117,30:117:4119:30:1057:-48.6122,0,-326.616	1/1:15:0,15:0:0:15:523:-46.8925,-4.51545,0	0/1:20:7,13:7:252:13:468:-35.9773,0,-17.0084	1/1:43:0,43:0:0:43:1540:-138.023,-12.9443,0	0/1:56:39,17:39:1373:17:608:-37.6727,0,-107.009	0/0:12:11,1:11:388:1:36:0,-0.0537426,-31.6987	1/1:22:0,22:0:0:22:773:-69.0873,-6.62266,0	0/1:55:46,9:46:1610:9:324:-12.6356,0,-128.629	0/1:17:11,6:11:392:6:212:-14.0463,0,-30.5025	0/1:6:2,4:2:72:4:144:-10.9551,0,-5.03054	0/1:81:68,13:68:2397:13:464:-17.5494,0,-191.603	1/1:41:0,41:0:0:41:1464:-130.603,-12.3422,0	0/1:22:18,4:18:636:4:144:-6.50685,0,-50.9454	0/1:113:88,25:88:3120:25:884:-45.2317,0,-247.01	1/1:37:2,35:2:72:35:1256:-104.999,-4.30139,0	0/1:65:58,7:58:2025:7:252:-3.18783,0,-162.907	1/1:9:0,9:0:0:9:324:-29.201,-2.70927,0	0/1:164:124,40:124:4419:40:1423:-77.8757,0,-348.515	1/1:21:0,21:0:0:21:748:-66.7205,-6.32163,0	1/1:17:1,16:1:36:16:568:-47.5873,-1.51924,0	1/1:28:0,28:0:0:28:999:-88.2651,-8.42884,0	0/1:96:82,14:82:2909:14:504:-15.9108,0,-232.989	0/1:26:20,6:20:704:6:216:-11.7534,0,-55.8578	1/1:16:0,16:0:0:16:568:-50.3692,-4.81648,0	0/1:97:65,32:65:2277:32:1148:-73.2018,0,-175.977	1/1:49:0,49:0:0:49:1756:-157.169,-14.7505,0	1/1:58:0,58:0:0:58:2064:-184.718,-17.4597,0	0/1:111:94,17:94:3330:17:604:-21.083,0,-266.502	1/1:35:1,34:1:36:34:1196:-103.822,-6.93778,0	0/1:24:17,7:17:608:7:252:-15.6344,0,-47.8273	0/1:96:76,20:76:2699:20:712:-35.0121,0,-214.256	0/1:94:71,23:71:2487:23:814:-44.5042,0,-195.62	1/1:50:0,50:0:0:50:1792:-159.442,-15.0515,0	1/1:32:1,31:1:36:31:1104:-94.9349,-6.03469,0	1/1:37:0,37:0:0:37:1328:-118.867,-11.1381,0	0/1:102:77,25:77:2734:25:896:-49.8351,0,-215.595	0/1:60:12,48:12:423:48:1689:-133.046,0,-20.3433	0/1:47:41,6:41:1459:6:216:-5.47369,0,-117.455	0/1:67:57,10:57:2036:10:360:-12.3258,0,-163.342	1/1:12:0,12:0:0:12:432:-38.5828,-3.61236,0	0/1:83:63,20:63:2219:20:720:-39.7311,0,-174.985	0/1:138:99,39:99:3491:39:1395:-83.382,0,-272.86	0/1:107:93,14:93:3332:14:491:-11.5679,0,-267.887	1/1:28:0,28:0:0:28:999:-87.5645,-8.42884,0	1/1:46:0,46:0:0:46:1647:-146.563,-13.8474,0
chr09	22236624	.	G	A	175985	PASS	AB=0.485754;ABP=11.7955;AC=137;AF=0.728723;AN=188;AO=8291;CIGAR=1X;DP=10874;DPB=10874;DPRA=0;EPP=18006.7;EPPR=5596.72;GTI=3;LEN=1;MEANALT=1.07447;MQM=59.942;MQMR=59.9852;NS=94;NUMALT=1;ODDS=1.08899;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=296706;QR=92276;RO=2576;RPL=8291;RPP=18006.7;RPPR=5596.72;RPR=0;RUN=1;SAF=0;SAP=18006.7;SAR=8291;SRF=0;SRP=5596.72;SRR=2576;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:23:0,23:0:0:23:828:-74.8441,-6.92369,0	1/1:179:0,179:0:0:179:6362:-572.671,-53.8844,0	1/1:180:0,180:0:0:180:6445:-580.132,-54.1854,0	1/1:184:0,184:0:0:184:6582:-592.461,-55.3895,0	0/1:48:25,22:25:896:22:792:-57.1356,0,-66.4905	0/1:73:32,41:32:1140:41:1472:-110.801,0,-80.934	0/1:147:72,75:72:2572:75:2669:-196.203,0,-187.479	0/1:169:80,89:80:2837:89:3188:-236.27,0,-204.694	0/1:46:25,21:25:900:21:752:-54.1589,0,-67.4736	1/1:149:1,148:1:36:148:5296:-473.174,-41.2552,0	0/1:167:84,83:84:3000:83:2980:-218.16,0,-219.96	1/1:109:0,109:0:0:109:3892:-350.419,-32.8123,0	1/1:83:0,83:0:0:83:2969:-267.441,-24.9855,0	1/1:199:0,199:0:0:199:7119:-640.767,-59.905,0	0/1:75:37,38:37:1332:38:1360:-100.123,0,-97.6051	0/1:76:33,43:33:1188:43:1540:-116.009,0,-84.3503	0/1:172:86,85:86:3083:85:3060:-223.792,0,-225.861	0/1:81:44,37:44:1580:37:1332:-95.799,0,-118.108	1/1:81:0,81:0:0:81:2884:-259.795,-24.3834,0	1/1:211:0,211:0:0:211:7560:-680.439,-63.5173,0	1/1:108:0,108:0:0:108:3871:-348.575,-32.5112,0	0/1:141:94,46:94:3364:46:1648:-106.251,0,-260.064	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	1/1:103:0,103:0:0:103:3696:-332.842,-31.0061,0	1/1:46:0,46:0:0:46:1648:-148.609,-13.8474,0	1/1:351:1,350:1:36:350:12500:-1121.18,-102.063,0	0/1:196:105,91:105:3764:91:3264:-234.97,0,-279.957	0/1:53:21,32:21:747:32:1152:-88.0356,0,-51.5997	1/1:206:0,206:0:0:206:7348:-661.37,-62.0122,0	1/1:171:1,170:1:36:170:6035:-539.601,-47.8779,0	0/1:66:29,37:29:1036:37:1328:-99.9543,0,-73.6859	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/1:21:12,9:12:432:9:320:-22.8207,0,-32.8996	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:231:106,124:106:3816:124:4460:-331.971,0,-274.039	1/1:256:0,256:0:0:256:9158:-822.387,-77.0637,0	1/1:119:0,119:0:0:119:4256:-383.218,-35.8226,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:157:69,88:69:2460:88:3164:-237.722,0,-174.393	1/1:61:0,61:0:0:61:2192:-197.545,-18.3628,0	0/1:128:66,62:66:2376:62:2224:-161.892,0,-175.566	0/1:93:49,44:49:1756:44:1580:-114.496,0,-130.328	0/1:90:43,47:43:1544:47:1688:-125.114,0,-112.16	0/1:64:42,21:42:1492:21:744:-47.9599,0,-115.25	0/1:124:64,60:64:2296:60:2152:-156.609,0,-169.573	1/1:157:4,153:4:144:153:5438:-476.19,-33.9481,0	1/1:112:0,112:0:0:112:4020:-361.987,-33.7154,0	0/1:260:143,117:143:5144:117:4196:-299.553,0,-384.831	1/1:119:2,117:2:72:117:4184:-369.906,-28.9858,0	0/1:20:12,8:12:432:8:284:-19.8828,0,-33.2006	1/1:150:0,150:0:0:150:5380:-484.33,-45.1545,0	0/1:41:19,22:19:684:22:792:-59.2634,0,-49.5481	0/1:33:14,19:14:500:19:684:-51.9563,0,-35.4022	1/1:149:0,149:0:0:149:5340:-479.543,-44.8535,0	0/1:11:1,10:1:36:10:356:-29.0699,0,-0.286945	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:42:20,22:20:712:22:788:-58.6015,0,-51.7634	0/1:91:57,34:57:2025:34:1224:-83.0733,0,-155.127	1/1:241:3,238:3:108:238:8535:-758.06,-62.4731,0	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/1:258:163,95:163:5840:95:3412:-229.628,0,-448.046	1/1:210:1,209:1:36:209:7488:-670.357,-59.618,0	0/1:120:66,54:66:2360:54:1940:-138.753,0,-176.535	0/1:114:54,60:54:1936:60:2160:-160.349,0,-140.199	0/1:135:62,73:62:2212:73:2620:-195.408,0,-158.706	1/1:78:0,78:0:0:78:2796:-251.88,-23.4803,0	1/1:97:0,97:0:0:97:3480:-312.711,-29.1999,0	0/1:74:48,26:48:1728:26:936:-62.2832,0,-133.529	1/1:148:1,147:1:36:147:5276:-471.374,-40.9542,0	0/1:35:23,12:23:816:12:428:-28.3228,0,-63.2257	1/1:123:0,123:0:0:123:4396:-395.806,-37.0267,0	0/1:92:42,50:42:1508:50:1792:-133.868,0,-108.32	1/1:154:0,154:0:0:154:5468:-492.25,-46.3586,0	1/1:164:1,163:1:36:163:5844:-522.455,-45.7706,0	0/1:129:67,62:67:2404:62:2232:-162.311,0,-177.784	1/1:214:2,212:2:72:212:7550:-672.682,-57.5837,0	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/1:159:78,80:78:2796:80:2868:-210.442,0,-203.965	0/1:169:85,84:85:3036:84:3018:-220.976,0,-222.592	1/1:178:1,177:1:36:177:6325:-565.741,-49.9851,0	1/1:115:0,115:0:0:115:4096:-368.822,-34.6185,0	1/1:126:0,126:0:0:126:4511:-405.054,-37.9298,0	0/1:121:61,60:61:2184:60:2156:-157.882,0,-160.401	1/1:182:1,181:1:36:181:6479:-578.897,-51.1892,0	0/1:44:20,24:20:720:24:851:-63.6465,0,-51.8835	0/1:99:45,54:45:1616:54:1914:-142.734,0,-115.928	1/1:103:0,103:0:0:103:3696:-332.842,-31.0061,0	0/1:125:56,69:56:2004:69:2467:-184.655,0,-143.005	0/1:237:99,138:99:3552:138:4926:-371.042,0,-248.544	0/1:101:70,31:70:2512:31:1101:-68.9943,0,-195.928	1/1:108:0,108:0:0:108:3872:-348.674,-32.5112,0	1/1:107:0,106:0:0:106:3793:-341.207,-31.9092,0
chr09	22474315	.	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chr09	22474328	.	T	C	303133	PASS	AB=0.509854;ABP=8.65911;AC=138;AF=0.734043;AN=188;AO=11350;CIGAR=1X;DP=14675;DPB=14675;DPRA=0;EPP=24649.2;EPPR=7201.44;GTI=2;LEN=1;MEANALT=1.04255;MQM=59.9678;MQMR=59.9042;NS=94;NUMALT=1;ODDS=3.44013;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=400587;QR=117545;RO=3319;RPL=6534;RPP=567.693;RPPR=201.643;RPR=4816;RUN=1;SAF=6534;SAP=567.693;SAR=4816;SRF=1934;SRP=200.203;SRR=1385;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:131:0,131:0:0:131:4633:-417.137,-39.4349,0	1/1:148:0,148:0:0:148:5222:-469.928,-44.5524,0	1/1:239:0,239:0:0:239:8406:-756.537,-71.9462,0	1/1:247:0,247:0:0:247:8717:-784.511,-74.3544,0	0/1:66:31,35:31:1112:35:1244:-92.3967,0,-80.5234	0/1:73:36,37:36:1284:37:1314:-96.5857,0,-93.8882	0/1:167:99,68:99:3469:68:2408:-166.703,0,-262.148	0/1:209:95,114:95:3381:114:4018:-298.891,0,-241.572	0/1:212:95,117:95:3346:117:4122:-307.348,0,-237.539	1/1:216:1,213:1:36:213:7541:-675.134,-61.182,0	0/1:165:72,93:72:2541:93:3283:-246.02,0,-179.271	1/1:213:0,213:0:0:213:7483:-673.508,-64.1194,0	1/1:209:0,209:0:0:209:7343:-660.929,-62.9153,0	1/1:185:0,185:0:0:185:6525:-587.33,-55.6906,0	0/1:160:96,64:96:3375:64:2262:-155.677,0,-255.806	0/1:180:81,99:81:2859:99:3461:-257.475,0,-202.587	0/1:116:60,56:60:2104:56:1994:-144.815,0,-154.706	0/1:108:53,55:53:1864:55:1916:-140.203,0,-135.526	1/1:124:1,123:1:36:123:4332:-386.46,-33.7294,0	1/1:243:1,242:1:36:242:8568:-767.524,-69.552,0	1/1:326:0,326:0:0:326:11463:-1031.56,-98.1358,0	0/1:98:63,35:63:2224:35:1230:-81.5015,0,-170.922	0/1:239:110,129:110:3914:129:4551:-337.812,0,-280.506	1/1:160:0,160:0:0:160:5663:-509.792,-48.1648,0	1/1:164:0,164:0:0:164:5868:-528.231,-49.3689,0	1/1:323:1,322:1:36:322:11382:-1020.67,-93.6344,0	0/1:374:172,202:172:6140:202:7187:-534.303,0,-440.107	0/1:91:49,42:49:1709:42:1500:-107.901,0,-126.697	1/1:298:2,296:2:72:296:10475:-935.839,-82.8702,0	1/1:121:0,121:0:0:121:4284:-385.74,-36.4246,0	0/1:273:129,144:129:4581:144:5155:-381.909,0,-330.273	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:18:11,7:11:387:7:243:-16.7889,0,-29.7381	0/1:6:5,1:5:171:1:36:-1.79209,0,-13.9193	1/1:19:0,19:0:0:19:657:-59.3933,-5.71957,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:423:193,230:193:6866:230:8056:-597.736,0,-490.677	1/1:135:0,135:0:0:135:4714:-424.419,-40.6391,0	1/1:128:0,128:0:0:128:4517:-406.7,-38.5318,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:148:82,66:82:2923:66:2323:-164.776,0,-218.748	1/1:87:0,87:0:0:87:3085:-277.878,-26.1896,0	0/1:191:90,101:90:3204:101:3555:-262.662,0,-231.085	0/1:196:92,104:92:3267:104:3640:-268.808,0,-235.222	1/1:182:1,181:1:36:181:6384:-571.057,-51.1892,0	0/1:145:72,73:72:2564:73:2571:-187.989,0,-187.361	0/1:137:50,87:50:1784:87:3059:-234.293,0,-119.602	1/1:161:2,159:2:72:159:5606:-497.828,-41.6291,0	1/1:157:0,157:0:0:157:5560:-500.526,-47.2617,0	0/1:221:120,101:120:4226:101:3585:-256.33,0,-313.886	1/1:164:0,164:0:0:164:5770:-519.419,-49.3689,0	0/1:9:6,3:6:207:3:108:-7.3659,0,-16.2576	1/1:197:1,196:1:36:196:6961:-622.959,-55.7046,0	0/1:79:33,46:33:1184:46:1632:-123.386,0,-83.0869	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	1/1:220:0,220:0:0:220:7779:-700.142,-66.2266,0	0/1:81:43,38:43:1536:38:1330:-95.6135,0,-114.15	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:15:8,7:8:288:7:239:-17.3264,0,-21.752	0/1:142:69,73:69:2448:73:2593:-190.871,0,-177.668	1/1:209:0,209:0:0:209:7414:-667.313,-62.9153,0	0/1:10:7,3:7:248:3:108:-7.06487,0,-19.6539	0/1:128:59,69:59:2104:69:2437:-181.011,0,-151.096	1/1:252:8,244:8:288:244:8627:-750.16,-49.5922,0	0/1:113:43,70:43:1524:70:2457:-187.366,0,-103.437	0/1:91:52,39:52:1836:39:1400:-98.9055,0,-138.124	0/1:316:155,161:155:5440:161:5689:-417.005,0,-393.397	1/1:256:6,249:6:216:249:8876:-779.032,-57.332,0	1/1:95:0,95:0:0:95:3345:-301.269,-28.5979,0	0/1:132:63,69:63:2256:69:2438:-179.939,0,-163.497	1/1:125:0,125:0:0:125:4358:-392.394,-37.6288,0	0/1:33:19,14:19:664:14:487:-34.2252,0,-50.1505	1/1:114:0,112:0:0:112:3959:-356.143,-33.7154,0	0/1:140:71,69:71:2536:69:2442:-177.89,0,-186.347	1/1:300:1,299:1:36:299:10570:-947.621,-86.7107,0	1/1:162:0,162:0:0:162:5756:-518.156,-48.7669,0	0/1:193:84,109:84:2982:109:3846:-288.237,0,-210.477	1/1:133:2,131:2:72:131:4677:-414.254,-33.2003,0	0/1:14:8,6:8:273:6:201:-14.2026,0,-20.6858	0/1:140:72,68:72:2531:68:2394:-173.571,0,-185.886	0/1:152:83,69:83:2951:69:2442:-174.278,0,-220.068	1/1:302:2,300:2:72:300:10554:-942.579,-84.0743,0	1/1:196:1,195:1:36:195:6881:-615.755,-55.4036,0	1/1:184:1,183:1:36:183:6450:-576.995,-51.7912,0	0/1:188:84,104:84:2966:104:3594:-267.073,0,-210.578	1/1:311:4,307:4:129:307:10811:-960.98,-81.6927,0	0/1:67:38,29:38:1356:29:1021:-72.0312,0,-102.171	0/1:163:90,73:90:3191:73:2563:-181.853,0,-238.03	1/1:160:0,160:0:0:160:5609:-504.881,-48.1648,0	0/1:105:54,51:54:1902:51:1765:-127.518,0,-139.843	0/1:174:76,98:76:2679:98:3417:-255.365,0,-188.97	0/1:183:104,79:104:3651:79:2771:-194.543,0,-273.706	1/1:80:0,80:0:0:80:2781:-250.529,-24.0824,0	1/1:284:1,282:1:36:282:9998:-896.168,-81.953,0
chr09	22474344	.	C	T	309180	PASS	AB=0.500515;ABP=3.02597;AC=138;AF=0.734043;AN=188;AO=11298;CIGAR=1X;DP=14722;DPB=14722;DPRA=0;EPP=791.928;EPPR=288.366;GTI=1;LEN=1;MEANALT=1.07447;MQM=59.9637;MQMR=59.9215;NS=94;NUMALT=1;ODDS=4.10175;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=399118;QR=121321;RO=3416;RPL=10912;RPP=21298.1;RPPR=6302.51;RPR=386;RUN=1;SAF=6278;SAP=307.179;SAR=5020;SRF=1909;SRP=105.738;SRR=1507;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:126:0,126:0:0:126:4437:-399.19,-37.9298,0	1/1:146:0,146:0:0:146:5204:-467.313,-43.9504,0	1/1:226:0,226:0:0:226:8021:-721.832,-68.0328,0	1/1:245:0,245:0:0:245:8579:-772.099,-73.7524,0	0/1:64:31,33:31:1095:33:1158:-85.2591,0,-79.5932	0/1:72:37,35:37:1320:35:1256:-91.6711,0,-97.4278	0/1:164:97,66:97:3458:66:2307:-158.462,0,-262.004	0/1:220:103,117:103:3647:117:4141:-306.644,0,-262.204	0/1:211:102,109:102:3632:109:3880:-285.88,0,-263.561	1/1:220:1,219:1:36:219:7679:-687.558,-62.6283,0	0/1:163:71,91:71:2511:91:3218:-240.718,0,-177.102	1/1:208:0,208:0:0:208:7392:-665.317,-62.6142,0	1/1:206:0,206:0:0:206:7320:-658.84,-62.0122,0	1/1:184:0,184:0:0:184:6508:-585.812,-55.3895,0	0/1:159:95,64:95:3392:64:2275:-157.148,0,-257.632	0/1:183:83,100:83:2919:100:3534:-263.154,0,-207.629	0/1:122:61,61:61:2192:61:2172:-159.013,0,-160.82	0/1:111:58,53:58:2072:53:1896:-137.504,0,-153.336	1/1:123:1,122:1:36:122:4368:-389.696,-33.4284,0	1/1:242:0,242:0:0:242:8575:-771.756,-72.8493,0	1/1:330:0,330:0:0:330:11632:-1046.77,-99.3399,0	0/1:97:63,34:63:2252:34:1181:-77.3926,0,-173.743	0/1:235:111,124:111:3896:124:4329:-319.05,0,-280.094	1/1:166:0,166:0:0:166:5848:-526.366,-49.971,0	1/1:160:0,160:0:0:160:5637:-507.457,-48.1648,0	1/1:325:0,325:0:0:325:11491:-1034.05,-97.8348,0	0/1:384:179,205:179:6354:205:7246:-536.607,0,-456.358	0/1:95:53,42:53:1880:42:1503:-106.967,0,-140.878	1/1:295:1,294:1:36:294:10267:-920.382,-85.2056,0	1/1:123:0,123:0:0:123:4369:-393.379,-37.0267,0	0/1:283:132,151:132:4665:151:5327:-394.376,0,-334.822	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:17:11,6:11:384:6:207:-13.8494,0,-29.7725	0/1:6:5,1:5:176:1:36:-1.79209,0,-14.3788	1/1:18:0,18:0:0:18:644:-58.2334,-5.41854,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:423:193,230:193:6888:230:8153:-606.452,0,-492.652	1/1:135:0,135:0:0:135:4786:-430.841,-40.6391,0	1/1:132:0,132:0:0:132:4689:-422.174,-39.736,0	0/1:5:1,4:1:36:4:131:-10.6083,0,-2.09312	0/1:153:84,69:84:3000:69:2408:-170.92,0,-224.175	1/1:84:0,84:0:0:84:2982:-268.613,-25.2865,0	0/1:192:89,103:89:3171:103:3647:-270.64,0,-227.817	0/1:205:97,108:97:3460:108:3846:-284.624,0,-249.874	1/1:184:0,184:0:0:184:6544:-589.046,-55.3895,0	0/1:144:75,69:75:2680:69:2452:-177.587,0,-198.097	0/1:143:54,89:54:1932:89:3160:-241.58,0,-131.109	1/1:160:2,158:2:72:158:5568:-494.391,-41.3281,0	1/1:163:0,163:0:0:163:5708:-513.846,-49.0679,0	0/1:223:128,95:128:4544:95:3336:-233.33,0,-341.772	1/1:162:0,162:0:0:162:5707:-513.759,-48.7669,0	0/1:11:8,3:8:275:3:108:-6.76384,0,-21.7721	1/1:183:1,182:1:36:182:6444:-576.458,-51.4902,0	0/1:76:34,42:34:1216:42:1472:-109.893,0,-86.8683	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:221:0,221:0:0:221:7743:-696.92,-66.5276,0	0/1:84:45,39:45:1580:39:1374:-98.6706,0,-117.201	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:15:8,7:8:275:7:248:-18.1487,0,-20.568	0/1:143:69,73:69:2454:73:2595:-190.693,0,-177.849	1/1:205:0,205:0:0:205:7248:-652.38,-61.7112,0	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/1:133:60,73:60:2092:73:2583:-192.644,0,-148.507	1/1:249:8,241:8:280:241:8472:-736.949,-49.4172,0	0/1:116:48,68:48:1695:68:2407:-181.968,0,-117.916	0/1:91:52,39:52:1844:39:1363:-95.5739,0,-138.847	0/1:330:171,159:171:6055:159:5589:-403.797,0,-444.986	1/1:260:6,254:6:212:254:8901:-781.666,-58.843,0	1/1:93:0,93:0:0:93:3306:-297.759,-27.9958,0	0/1:134:66,68:66:2344:68:2412:-176.991,0,-170.882	1/1:123:0,123:0:0:123:4379:-394.227,-37.0267,0	0/1:35:21,14:21:726:14:500:-34.8001,0,-54.8517	1/1:107:0,107:0:0:107:3765:-339.054,-32.2102,0	0/1:141:71,70:71:2536:70:2492:-182.088,0,-186.046	1/1:298:1,297:1:36:297:10416:-933.782,-86.1087,0	1/1:160:0,160:0:0:160:5588:-503.055,-48.1648,0	0/1:189:85,103:85:3012:103:3648:-271.575,0,-214.133	1/1:133:2,131:2:72:131:4673:-413.897,-33.2003,0	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	0/1:138:71,67:71:2513:67:2374:-172.375,0,-184.878	0/1:154:81,71:81:2849:71:2528:-181.675,0,-210.553	1/1:306:2,304:2:72:304:10625:-949.352,-85.2785,0	1/1:197:1,196:1:36:196:6929:-620.079,-55.7046,0	1/1:184:1,182:1:36:182:6433:-575.467,-51.85,0	0/1:196:89,107:89:3183:107:3806:-283.733,0,-227.692	1/1:308:4,304:4:144:304:10790:-957.696,-79.4036,0	0/1:69:40,29:40:1436:29:1032:-72.4224,0,-108.767	0/1:160:88,72:88:3156:72:2553:-181.856,0,-236.1	1/1:152:0,152:0:0:152:5392:-485.359,-45.7566,0	0/1:106:56,50:56:2000:50:1769:-127.582,0,-148.356	0/1:173:78,94:78:2749:94:3356:-250.12,0,-195.511	0/1:190:110,80:110:3915:80:2857:-200.17,0,-295.346	1/1:85:0,85:0:0:85:2991:-269.423,-25.5876,0	1/1:287:0,287:0:0:287:10159:-914.248,-86.3956,0
chr09	22477039	.	A	G	49440.2	PASS	AB=0.531981;ABP=20.0941;AC=138;AF=0.734043;AN=188;AO=2405;CIGAR=1X;DP=3309;DPB=3309;DPRA=0;EPP=5173.42;EPPR=1946.52;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.9958;MQMR=59.9878;NS=94;NUMALT=1;ODDS=2.08195;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=85721;QR=32228;RO=903;RPL=2399;RPP=5173.42;RPPR=1946.52;RPR=6;RUN=1;SAF=0;SAP=5225.4;SAR=2405;SRF=0;SRP=1963.85;SRR=903;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:22:0,22:0:0:22:775:-70.0712,-6.62266,0	1/1:22:0,22:0:0:22:773:-69.8895,-6.62266,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	1/1:41:0,41:0:0:41:1458:-131.516,-12.3422,0	0/1:8:2,6:2:72:6:212:-17.0166,0,-4.42848	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/1:15:5,10:5:180:10:356:-27.8658,0,-12.0366	0/1:24:15,9:15:540:9:324:-22.2811,0,-41.7118	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:77:29,48:29:1044:48:1724:-132.266,0,-71.0955	1/1:22:0,22:0:0:22:783:-70.7929,-6.62266,0	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:14:3,11:3:108:11:396:-31.7683,0,-5.86075	0/1:15:5,10:5:176:10:356:-27.8658,0,-11.6696	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/1:11:7,4:7:248:4:144:-10.0023,0,-19.3529	1/1:42:0,42:0:0:42:1504:-135.655,-12.6433,0	1/1:15:0,15:0:0:15:538:-48.7558,-4.51545,0	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	0/1:23:14,8:14:500:8:288:-19.4181,0,-38.4937	0/1:19:7,12:7:252:12:432:-33.5016,0,-17.3094	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	0/1:30:13,17:13:468:17:599:-45.2072,0,-33.4287	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	1/1:40:0,40:0:0:40:1424:-128.457,-12.0412,0	1/1:29:1,28:1:36:28:996:-86.3566,-5.1316,0	0/1:18:8,10:8:258:10:360:-27.3258,0,-18.1144	1/1:85:0,85:0:0:85:3036:-273.469,-25.5876,0	0/1:86:37,49:37:1294:49:1756:-132.435,0,-90.8684	0/1:35:15,20:15:540:20:716:-54.2317,0,-38.4005	1/1:135:1,134:1:36:134:4731:-422.349,-37.0408,0	0/1:145:72,73:72:2557:73:2601:-190.688,0,-186.73	0/1:32:16,16:16:553:16:574:-42.3614,0,-40.461	1/1:20:0,20:0:0:20:716:-64.7677,-6.0206,0	1/1:52:0,52:0:0:52:1872:-168.759,-15.6536,0	0/1:55:22,33:22:784:33:1157:-87.8756,0,-54.3096	0/1:18:10,8:10:360:8:279:-20.029,0,-27.3258	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	0/1:28:15,13:15:540:13:468:-34.0308,0,-40.5077	0/1:15:8,7:8:288:7:252:-18.5135,0,-21.752	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:13:7,6:7:252:6:212:-15.5114,0,-19.1156	1/1:36:0,36:0:0:36:1273:-114.871,-10.8371,0	1/1:16:0,16:0:0:16:567:-51.3607,-4.81648,0	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	0/1:108:52,56:52:1838:56:2012:-148.842,0,-133.185	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.8309	0/1:108:57,51:57:2052:51:1828:-132.29,0,-152.44	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	1/1:73:0,73:0:0:73:2613:-235.416,-21.9752,0	0/1:148:83,65:83:2942:65:2324:-164.868,0,-220.46	0/1:13:4,9:4:144:9:309:-24.2273,0,-9.40023	1/1:20:0,20:0:0:20:705:-63.7728,-6.0206,0	0/1:75:33,42:33:1169:42:1473:-110.283,0,-82.938	0/1:19:9,10:9:324:10:351:-26.2071,0,-23.7863	1/1:27:0,27:0:0:27:960:-86.7163,-8.12781,0	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:11:2,9:2:72:9:324:-26.1945,0,-3.52539	0/1:29:13,16:13:468:16:576:-43.4451,0,-33.7298	1/1:42:1,41:1:36:41:1411:-123.681,-9.04499,0	1/1:93:0,93:0:0:93:3339:-300.726,-27.9958,0	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:193:85,108:85:3037:108:3819:-285.809,0,-215.46	1/1:42:0,42:0:0:42:1480:-133.492,-12.6433,0	0/1:13:6,7:6:216:7:237:-17.7454,0,-15.8771	1/1:30:0,30:0:0:30:1042:-94.0855,-9.0309,0	1/1:31:0,31:0:0:31:1108:-100.031,-9.33193,0	0/1:21:11,10:11:396:10:360:-26.4227,0,-29.6611	1/1:14:0,14:0:0:14:492:-44.6118,-4.21442,0	0/1:105:43,62:43:1548:62:2207:-167.286,0,-108.005	0/1:12:6,6:6:216:6:216:-16.1782,0,-16.1782	0/1:15:3,12:3:104:12:428:-34.3434,0,-5.18736	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	1/1:25:1,24:1:36:24:864:-74.4843,-3.92748,0	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/1:24:8,16:8:280:16:567:-44.136,0,-18.3146	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:82:37,45:37:1332:45:1613:-120.775,0,-95.4979	0/1:145:68,77:68:2448:77:2755:-204.542,0,-176.925	0/1:17:6,11:6:216:11:396:-30.8652,0,-14.673	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0
chr09	22584058	.	GCTGG	ACTGG	34227.1	PASS	AB=0.48118;ABP=16.251;AC=49;AF=0.260638;AN=188;AO=2090;CIGAR=1X4M;DP=10237;DPB=10237.2;DPRA=0.897036;EPP=4541.39;EPPR=17574.6;GTI=3;LEN=1;MEANALT=1.52542;MQM=59.9383;MQMR=59.9681;NS=94;NUMALT=1;ODDS=1.38487;PAIRED=0;PAIREDR=0;PAO=3;PQA=108;PQR=0;PRO=0;QA=74801;QR=283679;RO=8092;RPL=2090;RPP=4541.39;RPPR=17574.6;RPR=0;RUN=1;SAF=0;SAP=4541.39;SAR=2090;SRF=0;SRP=17574.6;SRR=8092;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:133:133,0:133:4630:0:0:0,-40.037,-416.874	0/1:71:39,30:39:1345:30:1065:-75.0292,0,-100.216	0/0:254:252,0:252:8895:0:0:0,-75.8596,-800.19	0/0:241:241,0:241:8446:0:0:0,-72.5482,-760.162	0/1:82:56,25:56:1925:25:896:-56.2172,0,-148.779	0/1:33:25,8:25:862:8:288:-16.3252,0,-67.9595	0/1:79:52,26:52:1827:26:936:-60.7169,0,-140.68	0/1:215:131,83:131:4500:83:2976:-203.292,0,-340.399	0/1:180:91,88:91:3193:88:3125:-227.232,0,-233.354	0/0:113:113,0:113:3972:0:0:0,-34.0164,-357.678	0/1:27:12,15:12:422:15:540:-40.8087,0,-30.1877	0/0:96:95,0:95:3320:0:0:0,-28.5978,-298.664	0/0:82:81,0:81:2842:0:0:0,-24.3834,-255.17	0/0:39:39,0:39:1356:0:0:0,-11.7402,-122.336	0/1:96:47,48:47:1656:48:1720:-126.128,0,-120.37	0/1:65:22,43:22:788:43:1544:-119.686,0,-51.6781	0/1:29:14,15:14:483:15:540:-40.2067,0,-35.0678	0/1:39:26,13:26:909:13:468:-30.7195,0,-70.3846	0/0:34:29,2:29:1008:2:72:0,-2.85503,-84.1947	0/0:227:226,0:226:7961:0:0:0,-68.0328,-716.167	0/0:167:167,0:167:5793:0:0:0,-50.272,-521.501	0/1:252:79,172:79:2759:172:6148:-477.231,0,-172.633	0/1:134:67,67:67:2366:67:2408:-176.636,0,-172.855	0/0:91:90,0:90:3156:0:0:0,-27.0927,-283.909	0/0:158:156,2:156:5460:2:72:0,-40.726,-484.672	0/0:307:303,1:303:10617:1:36:0,-88.2747,-951.784	0/1:243:152,87:152:5378:87:3109:-207.73,0,-411.854	0/1:41:24,17:24:851:17:612:-43.0712,0,-64.5678	0/0:539:537,0:537:18906:0:0:0,-161.653,-1700.78	0/0:169:168,1:168:5895:1:36:0,-47.2758,-527.07	0/1:93:38,55:38:1346:55:1961:-148.768,0,-93.4432	0/0:12:12,0:12:404:0:0:0,-3.61236,-36.6825	0/1:29:21,8:21:724:8:273:-16.1703,0,-56.7487	0/1:4:3,1:3:101:1:36:-2.39415,0,-8.21961	0/0:4:4,0:4:141:0:0:0,-1.20412,-13.0369	0/1:27:21,6:21:714:6:216:-11.6627,0,-56.4466	0/1:205:119,84:119:4201:84:3016:-210.201,0,-316.806	0/0:173:173,0:173:6095:0:0:0,-52.0782,-548.66	0/0:27:26,0:26:916:0:0:0,-7.82678,-82.3967	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/1:99:46,53:46:1630:53:1892:-140.756,0,-117.187	0/0:23:23,0:23:810:0:0:0,-6.92369,-73.2206	0/0:192:189,0:189:6559:0:0:0,-56.8947,-590.049	0/0:66:66,0:66:2302:0:0:0,-19.868,-207.441	0/0:72:72,0:72:2536:0:0:0,-21.6742,-228.301	0/1:168:106,61:106:3723:61:2169:-144.839,0,-284.645	0/1:199:113,85:113:3911:85:3048:-214.704,0,-292.345	0/0:298:295,2:295:10221:2:72:0,-82.929,-913.018	0/0:136:136,0:136:4799:0:0:0,-40.9401,-432.072	0/1:81:28,49:28:980:49:1749:-134.14,0,-64.9731	0/0:124:124,0:124:4363:0:0:0,-37.3277,-392.851	0/1:5:3,2:3:107:2:72:-5.33157,0,-8.47702	0/0:197:197,0:197:6952:0:0:0,-59.3029,-625.759	0/1:84:32,51:32:1120:51:1824:-139.04,0,-75.7613	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/0:148:147,1:147:5178:1:36:0,-40.9542,-462.569	0/1:40:15,25:15:507:25:896:-68.9052,0,-33.9085	0/0:15:15,0:15:522:0:0:0,-4.51545,-47.3083	0/1:9:7,2:7:235:2:72:-4.12745,0,-18.7688	0/1:70:42,28:42:1457:28:1008:-69.9643,0,-110.351	0/0:80:80,0:80:2834:0:0:0,-24.0824,-255.3	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/1:212:112,100:112:3935:100:3565:-257.239,0,-290.53	0/0:219:213,6:213:7511:6:216:0,-46.1351,-656.24	0/1:59:37,22:37:1291:22:788:-53.484,0,-98.7293	0/1:109:59,47:59:2062:47:1673:-118.586,0,-153.581	0/1:186:89,97:89:3125:97:3476:-256.7,0,-225.082	0/0:172:171,1:171:6002:1:36:0,-48.1789,-536.697	0/0:17:17,0:17:601:0:0:0,-5.11751,-54.4194	0/1:94:58,36:58:2012:36:1288:-87.9234,0,-153.054	0/0:45:45,0:45:1597:0:0:0,-13.5463,-144.02	0/1:27:18,9:18:631:9:324:-21.378,0,-48.9881	0/0:107:107,0:107:3702:0:0:0,-32.2102,-333.389	0/1:121:50,70:50:1742:70:2512:-189.863,0,-120.594	0/0:136:134,1:134:4682:1:36:0,-37.4006,-417.951	0/0:193:192,0:192:6743:0:0:0,-57.7978,-606.591	0/1:184:85,96:85:2951:96:3436:-254.605,0,-210.982	0/0:103:103,0:103:3644:0:0:0,-31.0061,-328.168	0/1:9:3,6:3:107:6:216:-17.0812,0,-7.2729	0/1:136:68,67:68:2388:67:2412:-176.337,0,-174.18	0/1:145:56,88:56:1974:88:3141:-239.206,0,-134.226	0/0:217:213,2:213:7500:2:72:0,-58.2446,-668.22	0/0:46:45,0:45:1591:0:0:0,-13.5463,-143.12	0/0:69:69,0:69:2406:0:0:0,-20.7711,-216.796	0/1:58:28,30:28:987:30:1076:-79.6931,0,-71.6837	0/0:121:120,0:120:4247:0:0:0,-36.1236,-382.051	0/1:22:9,13:9:308:13:468:-35.837,0,-21.4273	0/1:63:32,31:32:1118:31:1107:-80.9455,0,-81.9614	0/0:65:65,0:65:2320:0:0:0,-19.5669,-209.059	0/1:37:17,20:17:588:20:716:-53.6296,0,-42.1054	0/1:48:19,29:19:670:29:1044:-79.8254,0,-46.176	0/1:71:25,46:25:877:46:1656:-127.955,0,-57.8742	0/0:114:114,0:114:3977:0:0:0,-34.3174,-358.125	0/0:92:92,0:92:3229:0:0:0,-27.6948,-290.835
chr09	22875955	.	A	G	20662.1	PASS	AB=0.490339;ABP=5.23402;AC=49;AF=0.260638;AN=188;AO=1352;CIGAR=1X;DP=6092;DPB=6092;DPRA=0.801851;EPP=2938.84;EPPR=10291.4;GTI=3;LEN=1;MEANALT=1.03636;MQM=45.5769;MQMR=41.4905;NS=94;NUMALT=1;ODDS=1.02433;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47301;QR=168764;RO=4738;RPL=0;RPP=2938.84;RPPR=10291.4;RPR=1352;RUN=1;SAF=0;SAP=2938.84;SAR=1352;SRF=0;SRP=10291.4;SRR=4738;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:41:40,1:40:1419:1:36:0,-8.79371,-119.616	0/1:82:43,39:43:1533:39:1387:-97.527,0,-106.506	0/0:115:115,0:115:4081:0:0:0,-34.6184,-353.93	0/0:121:121,0:121:4335:0:0:0,-36.4246,-377.174	0/1:26:6,20:6:216:20:709:-55.1968,0,-11.5388	0/1:8:4,4:4:144:4:144:-10.7213,0,-10.4703	0/1:94:50,44:50:1749:44:1540:-109.13,0,-125.191	0/0:60:60,0:60:2151:0:0:0,-18.0618,-187.587	0/1:62:25,37:25:892:37:1293:-94.7517,0,-59.4315	0/0:17:17,0:17:599:0:0:0,-5.11751,-52.8905	0/1:46:26,20:26:906:20:690:-47.7594,0,-65.7025	0/0:98:97,1:97:3424:1:32:0,-26.6018,-292.396	0/0:76:76,0:76:2716:0:0:0,-22.8783,-236.884	0/0:62:62,0:62:2211:0:0:0,-18.6639,-192.01	0/1:64:37,27:37:1309:27:946:-65.0819,0,-95.1509	0/1:80:36,44:36:1284:44:1548:-113.233,0,-88.4163	0/1:18:9,9:9:320:9:311:-22.5631,0,-22.8205	0/1:17:11,6:11:384:6:193:-12.3921,0,-28.7835	0/0:27:27,0:27:968:0:0:0,-8.12781,-82.8632	0/0:123:123,0:123:4393:0:0:0,-37.0267,-380.612	0/0:112:112,0:112:3957:0:0:0,-33.7154,-347.724	0/1:68:18,50:18:648:50:1765:-135.415,0,-36.624	0/1:99:40,59:40:1427:59:2075:-155.748,0,-94.7453	0/0:49:49,0:49:1743:0:0:0,-14.7505,-153.451	0/0:43:43,0:43:1526:0:0:0,-12.9443,-133.764	0/0:134:134,0:134:4812:0:0:0,-40.338,-417.167	0/1:94:52,42:52:1851:42:1479:-102.206,0,-134.5	0/1:17:10,7:10:352:7:229:-15.6726,0,-25.4435	0/0:150:150,0:150:5351:0:0:0,-45.1545,-466.991	0/0:110:110,0:110:3926:0:0:0,-33.1133,-343.386	0/1:91:50,41:50:1768:41:1441:-100.816,0,-126.694	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.0277	0/1:18:11,7:11:396:7:248:-17.0613,0,-29.7915	0/1:4:1,3:1:36:3:108:-8.73172,0,-2.27658	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.1736	0/0:19:19,0:19:666:0:0:0,-5.71957,-57.5357	0/1:171:96,75:96:3422:75:2566:-176.218,0,-248.377	0/0:64:63,1:63:2247:1:36:0,-16.0783,-192.758	0/0:36:36,0:36:1267:0:0:0,-10.8371,-109.949	0/1:5:4,1:4:144:1:36:-2.06166,0,-11.5226	0/1:96:53,43:53:1886:43:1499:-104.838,0,-135.799	0/0:26:26,0:26:927:0:0:0,-7.82678,-80.6627	0/0:58:58,0:58:2080:0:0:0,-17.4597,-182.255	0/0:27:27,0:27:964:0:0:0,-8.12781,-82.9328	0/0:38:38,0:38:1351:0:0:0,-11.4391,-118.49	0/1:83:41,42:41:1447:42:1470:-106.164,0,-100.227	0/1:53:25,28:25:896:28:975:-69.6277,0,-62.4088	0/0:91:91,0:91:3255:0:0:0,-27.3937,-282.693	0/0:103:103,0:103:3638:0:0:0,-31.0061,-316.155	0/1:75:37,37:37:1324:37:1306:-94.2439,0,-92.4102	0/0:88:88,0:88:3139:0:0:0,-26.4906,-274.753	0/1:20:9,11:9:320:11:383:-28.4932,0,-21.9797	0/0:107:107,0:107:3832:0:0:0,-32.2102,-332.994	0/1:41:28,13:28:1004:13:460:-28.8732,0,-75.0806	0/1:5:3,2:3:108:2:63:-4.42446,0,-8.2408	0/0:87:87,0:87:3071:0:0:0,-26.1896,-269.625	0/1:83:33,50:33:1188:50:1740:-130.287,0,-79.3546	0/0:11:11,0:11:392:0:0:0,-3.31133,-33.8316	0/1:16:8,8:8:288:8:279:-20.3525,0,-20.6104	0/1:65:43,22:43:1529:22:771:-48.9687,0,-115.287	0/0:83:83,0:83:2943:0:0:0,-24.9855,-256.713	0/1:5:2,3:2:72:3:108:-8.48192,0,-5.14998	0/1:133:82,50:82:2918:50:1774:-118.184,0,-215.224	0/0:124:122,2:122:4357:2:72:0,-30.5508,-372.762	0/1:49:22,27:22:780:27:953:-70.5764,0,-53.7807	0/1:34:17,17:17:612:17:604:-44.0157,0,-43.7974	0/1:138:72,66:72:2552:66:2299:-162.447,0,-181.996	0/0:100:100,0:100:3566:0:0:0,-30.103,-307.861	0/1:33:29,4:29:1031:4:144:-3.26322,0,-81.0841	0/1:77:35,42:35:1232:42:1489:-107.503,0,-83.6981	0/0:38:38,0:38:1355:0:0:0,-11.4391,-118.503	0/1:24:8,16:8:288:16:576:-44.4941,0,-17.8143	0/0:124:124,0:124:4418:0:0:0,-37.3277,-383.177	0/1:57:24,33:24:856:33:1157:-85.4242,0,-57.7916	0/0:92:92,0:92:3280:0:0:0,-27.6948,-286.945	0/0:122:122,0:122:4372:0:0:0,-36.7257,-380.721	0/1:47:29,18:29:1044:18:644:-42.9102,0,-75.5606	0/0:69:68,1:68:2435:1:36:0,-17.2226,-207.925	0/1:26:20,6:20:716:6:216:-11.6901,0,-54.8897	0/1:65:38,27:38:1332:27:948:-64.5764,0,-96.8709	0/1:69:23,46:23:820:46:1603:-120.64,0,-50.58	0/0:135:135,0:135:4839:0:0:0,-40.639,-422.873	0/0:65:65,0:65:2320:0:0:0,-19.5669,-202.656	0/1:58:31,27:31:1112:27:932:-65.3187,0,-79.0709	0/1:33:15,18:15:540:18:635:-45.9482,0,-37.4337	0/0:94:93,1:93:3332:1:36:0,-24.73,-285.228	0/1:20:11,9:11:396:9:320:-22.7404,0,-28.1095	0/1:70:35,35:35:1256:35:1206:-85.9652,0,-87.7818	0/0:59:59,0:59:2116:0:0:0,-17.7608,-180.886	0/1:48:20,28:20:701:28:992:-72.9962,0,-47.6188	0/1:112:60,52:60:2096:52:1798:-126.349,0,-149.037	0/1:44:14,30:14:487:30:1001:-76.1239,0,-29.8743	0/0:60:60,0:60:2143:0:0:0,-18.0618,-185.694	0/0:80:80,0:80:2839:0:0:0,-24.0824,-249.041
chr09	22875960	.	A	C	95274.1	PASS	AB=0.504165;ABP=3.42635;AC=139;AF=0.739362;AN=188;AO=4758;CIGAR=1X;DP=6141;DPB=6141;DPRA=0;EPP=10334.9;EPPR=2997.47;GTI=2;LEN=1;MEANALT=1.04255;MQM=41.4643;MQMR=45.5997;NS=94;NUMALT=1;ODDS=4.79489;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=169300;QR=49334;RO=1379;RPL=0;RPP=10334.9;RPPR=2997.47;RPR=4758;RUN=1;SAF=0;SAP=10334.9;SAR=4758;SRF=0;SRP=2997.47;SRR=1379;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:43:1,42:1:36:42:1494:-126.076,-9.39577,0	0/1:84:41,43:41:1472:43:1544:-106.854,0,-103.333	1/1:116:0,116:0:0:116:4134:-358.894,-34.9195,0	1/1:121:0,121:0:0:121:4284:-373.598,-36.4246,0	0/1:26:20,6:20:720:6:216:-11.5388,0,-55.9092	0/1:9:4,5:4:144:5:180:-13.3019,0,-10.4202	0/1:95:44,51:44:1584:51:1794:-128.762,0,-112.646	1/1:60:0,59:0:0:59:2094:-182.26,-17.7608,0	0/1:61:37,23:37:1317:23:828:-53.9778,0,-97.4804	1/1:17:0,17:0:0:17:597:-52.6678,-5.11751,0	0/1:45:20,25:20:720:25:896:-65.0188,0,-50.6698	1/1:99:1,97:1:36:97:3445:-293.137,-26.3073,0	1/1:75:0,75:0:0:75:2696:-234.258,-22.5773,0	1/1:63:0,63:0:0:63:2237:-194.326,-18.9649,0	0/1:62:27,35:27:972:35:1244:-90.3026,0,-67.9459	0/1:79:43,36:43:1540:36:1288:-89.2832,0,-112.062	0/1:19:9,10:9:324:10:345:-24.6975,0,-23.3783	0/1:17:6,11:6:208:11:392:-29.3875,0,-13.7215	1/1:27:0,27:0:0:27:964:-82.7791,-8.12781,0	1/1:123:0,123:0:0:123:4383:-380.565,-37.0267,0	1/1:115:0,115:0:0:115:4078:-358.422,-34.6185,0	0/1:70:52,18:52:1868:18:648:-36.0219,0,-143.583	0/1:98:58,40:58:2080:40:1415:-92.9238,0,-156.429	1/1:50:0,50:0:0:50:1781:-156.708,-15.0515,0	1/1:44:1,43:1:36:43:1533:-130.074,-9.64705,0	1/1:137:1,136:1:36:136:4854:-417.779,-37.6428,0	0/1:94:42,52:42:1484:52:1863:-135.458,0,-102.922	0/1:16:7,9:7:252:9:324:-23.2192,0,-18.0111	1/1:148:0,148:0:0:148:5311:-463.308,-44.5524,0	1/1:110:0,110:0:0:110:3923:-343.173,-33.1133,0	0/1:96:43,53:43:1539:53:1870:-134.3,0,-107.35	1/1:5:0,5:0:0:5:165:-14.8868,-1.50515,0	0/1:18:7,11:7:248:11:396:-29.7915,0,-17.0613	0/1:4:3,1:3:104:1:36:-2.27658,0,-8.38663	1/1:7:0,7:0:0:7:233:-20.7099,-2.10721,0	1/1:18:0,18:0:0:18:644:-55.7604,-5.41854,0	0/1:169:77,92:77:2743:92:3280:-236.595,0,-191.698	1/1:67:0,67:0:0:67:2385:-207.455,-20.169,0	1/1:38:0,38:0:0:38:1329:-115.519,-11.4391,0	0/1:5:1,4:1:36:4:144:-11.5226,0,-2.06166	0/1:93:40,53:40:1432:53:1881:-136.458,0,-98.8938	1/1:26:0,26:0:0:26:928:-80.3807,-7.82678,0	1/1:58:1,57:1:36:57:2052:-176.674,-13.8929,0	1/1:28:0,28:0:0:28:977:-84.4926,-8.42884,0	1/1:39:0,39:0:0:39:1400:-122.464,-11.7402,0	0/1:85:43,42:43:1539:42:1481:-102.22,0,-111.344	0/1:52:28,24:28:1008:24:860:-59.5772,0,-72.7848	1/1:94:0,94:0:0:94:3301:-286.758,-28.2968,0	1/1:104:0,104:0:0:104:3705:-322.279,-31.3071,0	0/1:77:40,37:40:1440:37:1312:-91.3752,0,-105.604	1/1:92:1,91:1:36:91:3253:-280.674,-24.0965,0	0/1:20:11,9:11:392:9:324:-22.2932,0,-29.2948	1/1:107:0,107:0:0:107:3813:-331.113,-32.2102,0	0/1:41:14,27:14:504:27:968:-71.928,0,-32.8596	0/1:6:3,3:3:108:3:108:-7.93977,0,-7.66862	1/1:91:0,91:0:0:91:3236:-283.837,-27.3937,0	0/1:87:54,33:54:1920:33:1180:-77.5291,0,-145.06	1/1:11:0,11:0:0:11:396:-33.9362,-3.31133,0	0/1:15:8,7:8:284:7:252:-17.7587,0,-21.0992	0/1:66:23,43:23:811:43:1476:-110.578,0,-52.2105	1/1:82:0,82:0:0:82:2940:-255.995,-24.6845,0	0/1:5:3,2:3:108:2:72:-5.14998,0,-8.48192	0/1:131:50,81:50:1792:81:2896:-214.1,0,-120.403	1/1:124:2,122:2:72:122:4377:-374.299,-30.5508,0	0/1:49:27,22:27:968:22:784:-54.3174,0,-71.903	0/1:34:17,17:17:612:17:612:-43.7974,0,-44.7047	0/1:141:67,74:67:2404:74:2645:-189.271,0,-170.941	1/1:96:0,96:0:0:96:3407:-295.118,-28.8989,0	0/1:33:4,29:4:140:29:1021:-80.2294,0,-2.91142	0/1:77:42,35:42:1512:35:1252:-85.4351,0,-109.073	1/1:37:0,37:0:0:37:1332:-116.362,-11.1381,0	0/1:25:17,8:17:612:8:284:-17.1993,0,-47.0597	1/1:124:1,123:1:36:123:4380:-376.673,-33.7294,0	0/1:56:32,24:32:1139:24:860:-58.393,0,-83.6036	1/1:93:0,93:0:0:93:3278:-287.254,-27.9958,0	1/1:123:0,123:0:0:123:4334:-377.642,-37.0267,0	0/1:45:17,28:17:612:28:996:-72.5803,0,-40.6533	1/1:66:1,64:1:36:64:2296:-196.025,-16.3719,0	0/1:26:6,20:6:216:20:720:-55.2103,0,-11.6901	0/1:69:30,39:30:1072:39:1377:-99.5901,0,-73.4663	0/1:70:46,24:46:1648:24:859:-53.0111,0,-124.2	1/1:138:0,138:0:0:138:4926:-430.55,-41.5421,0	1/1:66:0,66:0:0:66:2372:-206.978,-19.868,0	0/1:59:28,31:28:995:31:1112:-78.7698,0,-70.5857	0/1:34:19,15:19:667:15:536:-36.8207,0,-49.1149	1/1:94:1,93:1:36:93:3299:-282.972,-24.73,0	0/1:20:9,11:9:324:11:396:-28.1095,0,-23.0772	0/1:71:35,36:35:1252:36:1277:-89.366,0,-89.1618	1/1:63:0,63:0:0:63:2202:-189.131,-18.9649,0	0/1:48:29,19:29:1040:19:676:-45.4342,0,-77.2375	0/1:115:55,60:55:1964:60:2117:-150.184,0,-139.354	0/1:44:30,14:30:1068:14:496:-30.6147,0,-81.7359	1/1:60:0,60:0:0:60:2129:-184.869,-18.0618,0	1/1:81:0,81:0:0:81:2870:-251.754,-24.3834,0
chr09	23227832	.	C	T	29900.7	PASS	AB=0.466483;ABP=41.876;AC=46;AF=0.244681;AN=188;AO=1869;CIGAR=1X;DP=9725;DPB=9725;DPRA=0.756253;EPP=4061.49;EPPR=17044.7;GTI=3;LEN=1;MEANALT=1.05455;MQM=59.9909;MQMR=59.9968;NS=94;NUMALT=1;ODDS=2.19543;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66437;QR=281081;RO=7848;RPL=0;RPP=4061.49;RPPR=17044.7;RPR=1869;RUN=1;SAF=1869;SAP=4061.49;SAR=0;SRF=7848;SRP=17044.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.609	0/1:182:85,97:85:3056:97:3464:-257.185,0,-220.481	0/0:125:125,0:125:4488:0:0:0,-37.6287,-404.088	0/0:171:171,0:171:6128:0:0:0,-51.4761,-551.619	0/1:46:22,24:22:784:24:837:-61.7983,0,-57.0365	0/1:23:8,15:8:288:15:528:-40.9271,0,-19.3437	0/1:114:68,46:68:2440:46:1614:-111.228,0,-185.538	0/0:122:122,0:122:4368:0:0:0,-36.7257,-393.294	0/1:208:130,77:130:4636:77:2721:-182.609,0,-354.881	0/0:101:100,1:100:3584:1:36:0,-26.8058,-319.168	0/0:104:104,0:104:3719:0:0:0,-31.3071,-334.911	0/0:79:79,0:79:2818:0:0:0,-23.7814,-253.858	0/0:92:92,0:92:3304:0:0:0,-27.6948,-297.578	0/0:283:283,0:283:10147:0:0:0,-85.1915,-913.158	0/1:83:43,40:43:1544:40:1432:-104.192,0,-114.268	0/1:90:42,48:42:1512:48:1720:-127.993,0,-109.282	0/1:87:47,40:47:1688:40:1425:-102.357,0,-126.017	0/1:80:42,38:42:1508:38:1360:-98.6182,0,-111.932	0/0:74:74,0:74:2635:0:0:0,-22.2762,-237.397	0/0:199:199,0:199:7132:0:0:0,-59.905,-641.937	0/0:217:217,0:217:7796:0:0:0,-65.3235,-701.666	0/1:92:23,69:23:820:69:2464:-194.32,0,-46.4278	0/1:67:33,34:33:1176:34:1197:-87.8644,0,-85.9788	0/0:120:120,0:120:4308:0:0:0,-36.1236,-387.895	0/0:69:68,1:68:2432:1:36:0,-17.1728,-215.537	0/0:226:226,0:226:8104:0:0:0,-68.0328,-729.375	0/1:275:144,131:144:5141:131:4520:-324.186,0,-380.048	0/1:41:16,25:16:576:25:875:-66.7239,0,-39.8328	0/0:228:228,0:228:8168:0:0:0,-68.6348,-735.133	0/0:98:96,0:96:3425:0:0:0,-28.8989,-308.103	0/1:172:99,73:99:3548:73:2595:-182.02,0,-267.751	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:21:11,10:11:392:10:360:-26.4227,0,-29.2984	0/1:9:6,3:6:212:3:108:-7.3659,0,-16.7155	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:178:90,88:90:3224:88:3142:-229.422,0,-236.799	0/0:208:208,0:208:7444:0:0:0,-62.6142,-670.005	0/0:103:103,0:103:3687:0:0:0,-31.0061,-332.032	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:115:61,54:61:2184:54:1891:-135.845,0,-162.208	0/0:69:68,1:68:2448:1:36:0,-17.1728,-216.976	0/0:108:108,0:108:3868:0:0:0,-32.5112,-348.315	0/0:97:97,0:97:3484:0:0:0,-29.1999,-313.77	0/0:48:48,0:48:1700:0:0:0,-14.4494,-153.283	0/1:78:39,39:39:1396:39:1389:-101.827,0,-102.459	0/0:113:113,0:113:4040:0:0:0,-34.0164,-363.788	0/0:193:191,2:191:6844:2:72:0,-51.2621,-609.192	0/0:97:97,0:97:3484:0:0:0,-29.1999,-313.77	0/1:120:49,71:49:1760:71:2529:-191.737,0,-122.56	0/0:212:211,1:211:7560:1:36:0,-60.2201,-676.841	0/1:20:11,9:11:396:9:315:-22.6673,0,-29.9621	0/0:132:132,0:132:4736:0:0:0,-39.736,-426.397	0/1:22:15,7:15:532:7:252:-16.4063,0,-41.5904	0/1:40:25,15:25:896:15:540:-36.8953,0,-68.9192	0/0:137:137,0:137:4885:0:0:0,-41.2411,-439.803	0/1:63:40,23:40:1421:23:828:-55.8792,0,-109.221	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/1:22:19,3:19:680:3:104:-3.08015,0,-54.9065	0/1:59:27,32:27:972:32:1152:-86.2294,0,-70.0371	0/0:117:116,1:116:4155:1:36:0,-31.6222,-370.534	0/1:10:6,4:6:216:4:140:-9.93428,0,-16.7802	0/1:167:93,74:93:3340:74:2644:-187.935,0,-250.544	0/0:163:162,0:162:5812:0:0:0,-48.7669,-522.832	0/1:52:25,27:25:892:27:960:-71.0627,0,-64.9461	0/1:88:62,26:62:2220:26:916:-56.2658,0,-173.574	0/1:195:115,80:115:4124:80:2856:-198.577,0,-312.643	0/0:84:83,1:83:2976:1:36:0,-21.6882,-264.474	0/0:49:48,1:48:1706:1:36:0,-11.1522,-150.226	0/1:77:47,30:47:1684:30:1072:-73.6131,0,-128.666	0/0:82:82,0:82:2932:0:0:0,-24.6845,-264.115	0/1:29:17,12:17:608:12:420:-29.4042,0,-46.3222	0/0:142:139,2:139:4984:2:68:0,-36.3407,-442.243	0/1:97:57,40:57:2044:40:1424:-99.2576,0,-155.032	0/0:154:153,0:153:5476:0:0:0,-46.0576,-492.478	0/0:177:177,0:177:6352:0:0:0,-53.2823,-571.768	0/1:95:58,37:58:2057:37:1302:-88.877,0,-156.802	0/0:112:112,0:112:4024:0:0:0,-33.7154,-362.347	0/1:34:18,16:18:640:16:576:-41.94,0,-47.6943	0/1:89:45,44:45:1599:44:1558:-113.718,0,-117.408	0/0:106:106,0:106:3812:0:0:0,-31.9092,-343.276	0/0:205:204,0:204:7296:0:0:0,-61.4101,-656.332	0/0:109:109,0:109:3900:0:0:0,-32.8123,-351.194	0/1:92:46,46:46:1652:46:1656:-121.634,0,-121.274	0/1:125:58,67:58:2079:67:2404:-178.988,0,-149.751	0/0:154:154,0:154:5502:0:0:0,-46.3586,-495.306	0/1:50:25,25:25:892:25:892:-65.5482,0,-65.5482	0/1:84:52,32:52:1872:32:1152:-78.7036,0,-143.473	0/1:83:45,38:45:1603:38:1364:-98.0752,0,-119.574	0/1:96:49,47:49:1752:47:1679:-122.498,0,-129.065	0/1:129:79,50:79:2844:50:1800:-123.449,0,-217.364	0/1:80:28,51:28:996:51:1832:-141.02,0,-65.8138	0/0:58:58,0:58:2088:0:0:0,-17.4597,-188.19	0/0:101:101,0:101:3606:0:0:0,-30.404,-324.746
chr09	23895537	.	A	G	313404	PASS	AB=0.480913;ABP=25.0603;AC=141;AF=0.75;AN=188;AO=12413;CIGAR=1X;DP=16052;DPB=16052;DPRA=0;EPP=26957.5;EPPR=7896.31;GTI=0;LEN=1;MEANALT=1.04255;MQM=58.7068;MQMR=59.1593;NS=94;NUMALT=1;ODDS=3.52249;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=443170;QR=129292;RO=3635;RPL=10271;RPP=11562.8;RPPR=2116.63;RPR=2142;RUN=1;SAF=10271;SAP=11562.8;SAR=2142;SRF=2758;SRP=2116.63;SRR=877;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:46:0,46:0:0:46:1644:-148.239,-13.8474,0	0/1:257:121,136:121:4297:136:4823:-356.857,0,-309.541	0/1:167:103,64:103:3625:64:2282:-155.344,0,-276.184	1/1:275:0,275:0:0:275:9855:-884.763,-82.7833,0	0/1:129:61,68:61:2150:68:2428:-179.943,0,-154.861	0/1:84:45,39:45:1585:39:1381:-99.2984,0,-117.65	0/1:221:107,114:107:3798:114:4079:-300.371,0,-275.108	1/1:226:1,225:1:36:225:8046:-719.85,-64.4345,0	0/1:42:24,18:24:860:18:640:-45.2848,0,-65.0786	1/1:88:0,88:0:0:88:3143:-283.093,-26.4906,0	1/1:113:0,113:0:0:113:4025:-361.637,-34.0164,0	1/1:80:0,80:0:0:80:2849:-256.645,-24.0824,0	1/1:75:0,75:0:0:75:2676:-241.072,-22.5773,0	1/1:125:0,125:0:0:125:4459:-401.407,-37.6288,0	0/1:73:35,38:35:1241:38:1368:-100.742,0,-90.0173	0/1:64:29,35:29:1028:35:1256:-94.0794,0,-73.5671	0/1:86:40,46:40:1440:46:1647:-122.595,0,-104.009	0/1:88:41,47:41:1445:47:1692:-126.069,0,-103.853	1/1:64:0,64:0:0:64:2292:-206.534,-19.2659,0	1/1:450:2,448:2:72:448:16047:-1434.55,-128.627,0	1/1:161:0,161:0:0:161:5788:-518.919,-48.4658,0	0/1:500:345,155:345:12283:155:5536:-346.21,0,-953.785	0/1:34:19,15:19:680:15:536:-37.6328,0,-50.4348	1/1:197:0,197:0:0:197:7032:-630.135,-59.3029,0	1/1:113:0,113:0:0:113:3983:-355.856,-34.0164,0	1/1:978:1,977:1:36:977:34864:-3125.65,-290.809,0	0/1:321:164,157:164:5853:157:5599:-406.648,0,-429.762	0/1:37:16,21:16:553:21:744:-55.443,0,-38.9559	1/1:1197:1,1196:1:36:1196:42650:-3826.03,-356.797,0	1/1:241:0,241:0:0:241:8628:-776.459,-72.5482,0	0/1:80:46,34:46:1652:34:1224:-86.3846,0,-124.458	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:30:17,13:17:608:13:468:-33.4287,0,-46.0211	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:421:194,227:194:6944:227:8078:-598.054,0,-497.776	1/1:407:0,407:0:0:407:14545:-1308.02,-122.519,0	1/1:88:0,88:0:0:88:3136:-282.457,-26.4906,0	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:252:152,100:152:5392:100:3570:-244.938,0,-409.054	1/1:45:0,45:0:0:45:1612:-145.359,-13.5464,0	1/1:172:0,172:0:0:172:6118:-549.192,-51.7772,0	1/1:67:0,67:0:0:67:2389:-215.261,-20.169,0	1/1:78:0,78:0:0:78:2780:-248.87,-23.4803,0	0/1:336:160,176:160:5716:176:6280:-462.335,0,-411.999	1/1:191:0,191:0:0:191:6817:-613.438,-57.4967,0	1/1:177:0,177:0:0:177:6323:-565.28,-53.2823,0	1/1:176:1,175:1:36:175:6265:-560.298,-49.383,0	0/1:249:103,146:103:3631:146:5241:-396.858,0,-251.338	0/1:681:372,309:372:13293:309:11007:-784.384,0,-988.955	0/1:14:7,7:7:252:7:252:-18.8145,0,-18.8145	1/1:221:0,221:0:0:221:7904:-711.267,-66.5276,0	0/1:187:93,94:93:3276:94:3371:-246.826,0,-238.67	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.0422	1/1:215:0,215:0:0:215:7628:-686.461,-64.7215,0	0/1:27:13,14:13:468:14:504:-37.5703,0,-34.2617	1/1:33:0,33:0:0:33:1164:-104.981,-9.93399,0	0/1:79:42,36:42:1493:36:1292:-92.453,0,-110.327	0/1:133:58,75:58:2022:75:2684:-201.76,0,-141.653	1/1:202:2,200:2:68:200:7152:-637.233,-54.3504,0	0/1:8:7,1:7:248:1:36:-1.19004,0,-20.256	0/1:621:302,318:302:10769:318:11360:-833.878,0,-781.235	1/1:332:6,326:6:216:326:11640:-1025.51,-80.1514,0	0/1:145:68,77:68:2424:77:2760:-204.99,0,-174.277	0/1:143:81,62:81:2888:62:2189:-153.073,0,-217.107	0/1:138:71,67:71:2520:67:2384:-173.254,0,-185.503	1/1:191:0,191:0:0:191:6811:-613.019,-57.4967,0	1/1:51:0,51:0:0:51:1815:-163.624,-15.3525,0	0/1:131:69,62:69:2434:62:2220:-160.628,0,-179.877	1/1:184:0,184:0:0:184:6573:-591.118,-55.3895,0	0/1:36:14,22:14:489:22:788:-60.4077,0,-33.5018	1/1:198:2,195:2:72:195:6964:-619.882,-52.826,0	0/1:76:37,39:37:1320:39:1396:-103.059,0,-96.2237	1/1:102:0,102:0:0:102:3651:-328.56,-30.7051,0	1/1:220:1,218:1:36:218:7784:-695.577,-62.6871,0	0/1:267:154,113:154:5482:113:4014:-281.045,0,-413.132	1/1:177:1,176:1:36:176:6316:-564.92,-49.684,0	0/1:12:10,2:10:356:2:72:-3.22436,0,-28.7689	1/1:112:1,111:1:32:111:3968:-354.11,-30.516,0	1/1:174:0,174:0:0:174:6200:-558.079,-52.3792,0	1/1:369:0,369:0:0:369:13124:-1175.06,-111.08,0	0/1:136:68,68:68:2404:68:2448:-177.53,0,-175.675	0/1:79:36,43:36:1288:43:1539:-114.316,0,-91.5852	1/1:84:1,83:1:36:83:2932:-260.516,-21.6882,0	1/1:148:0,148:0:0:148:5293:-475.097,-44.5524,0	0/1:44:18,26:18:644:26:936:-71.3141,0,-45.0453	0/1:97:44,53:44:1580:53:1888:-140.996,0,-113.292	0/1:100:51,49:51:1816:49:1732:-126.057,0,-133.618	0/1:57:31,26:31:1112:26:932:-67.0355,0,-83.2311	0/1:169:82,87:82:2928:87:3115:-229.691,0,-211.156	0/1:92:50,42:50:1753:42:1504:-107.957,0,-130.357	1/1:116:0,116:0:0:116:4159:-372.235,-34.9195,0	1/1:98:0,98:0:0:98:3503:-315.464,-29.5009,0
chr09	23895560	.	G	A	61873	PASS	AB=0.523487;ABP=36.2632;AC=47;AF=0.25;AN=188;AO=3649;CIGAR=1X;DP=16712;DPB=16712;DPRA=0.966361;EPP=7926.71;EPPR=28351.6;GTI=2;LEN=1;MEANALT=1.01724;MQM=55.2568;MQMR=54.5265;NS=94;NUMALT=1;ODDS=2.24467;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=130281;QR=464722;RO=13059;RPL=0;RPP=7926.71;RPPR=28351.6;RPR=3649;RUN=1;SAF=0;SAP=7926.71;SAR=3649;SRF=0;SRP=28360.3;SRR=13059;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:47:47,0:47:1670:0:0:0,-14.1484,-150.503	0/1:258:118,140:118:4214:140:4995:-370.666,0,-301.184	0/1:325:143,182:143:5092:182:6494:-483.822,0,-357.163	0/0:448:448,0:448:15976:0:0:0,-134.861,-1431.03	0/1:160:82,78:82:2921:78:2795:-202.616,0,-212.28	0/1:48:22,26:22:784:26:924:-68.9865,0,-56.3186	0/1:334:160,174:160:5672:174:6186:-455.117,0,-406.002	0/0:306:305,1:305:10880:1:36:0,-88.5186,-973.495	0/1:179:76,103:76:2702:103:3655:-274.728,0,-189.333	0/0:204:204,0:204:7256:0:0:0,-61.4101,-650.766	0/0:63:62,0:62:2201:0:0:0,-18.6639,-196.825	0/0:76:75,1:75:2647:1:36:0,-19.3756,-234.762	0/0:68:68,0:68:2427:0:0:0,-20.47,-216.507	0/0:62:62,0:62:2177:0:0:0,-18.6639,-195.615	0/1:66:35,31:35:1256:31:1108:-79.9955,0,-92.5233	0/1:60:29,31:29:1040:31:1116:-82.4255,0,-75.4627	0/1:77:38,39:38:1360:39:1404:-101.914,0,-99.3498	0/1:53:24,29:24:843:29:1027:-76.7351,0,-59.7674	0/0:42:42,0:42:1512:0:0:0,-12.6433,-135.591	0/0:549:549,0:549:19589:0:0:0,-165.265,-1756.52	0/0:330:330,0:330:11617:0:0:0,-99.3399,-1039.89	0/1:305:95,210:95:3370:210:7496:-581.708,0,-210.397	0/1:172:92,80:92:3268:80:2876:-206.17,0,-240.534	0/0:216:215,1:215:7679:1:36:0,-61.4293,-681.484	0/0:165:165,0:165:5883:0:0:0,-49.6699,-526.072	0/0:624:624,0:624:22212:0:0:0,-187.843,-1990.63	0/1:404:221,183:221:7771:183:6576:-468.805,0,-573.393	0/1:27:14,13:14:504:13:464:-33.7685,0,-36.7422	0/0:696:694,1:694:24679:1:36:0,-206.031,-2209.35	0/0:245:244,1:244:8702:1:36:0,-70.1592,-777.136	0/1:362:189,173:189:6762:173:6169:-444.101,0,-498.557	0/0:11:11,0:11:381:0:0:0,-3.31133,-34.5741	0/1:22:8,14:8:288:14:504:-39.0106,0,-19.2279	0/1:10:5,5:5:165:5:165:-12.157,0,-12.157	0/0:17:17,0:17:612:0:0:0,-5.11751,-54.5996	0/0:13:13,0:13:453:0:0:0,-3.91339,-41.0809	0/1:193:104,89:104:3695:89:3192:-228.875,0,-272.396	0/0:346:344,2:344:12273:2:72:0,-97.5012,-1092.78	0/0:58:58,0:58:2052:0:0:0,-17.4597,-183.173	0/1:7:5,2:5:180:2:72:-4.71982,0,-14.3	0/1:399:151,248:151:5388:248:8832:-671.667,0,-363.134	0/0:43:43,0:43:1521:0:0:0,-12.9443,-135.729	0/0:281:281,0:281:10033:0:0:0,-84.5894,-897.67	0/0:81:81,0:81:2856:0:0:0,-24.3834,-256.48	0/0:52:52,0:52:1845:0:0:0,-15.6536,-164.406	0/1:261:135,126:135:4789:126:4448:-320.65,0,-350.639	0/0:231:230,1:230:8103:1:36:0,-65.9414,-720.974	0/0:412:411,1:411:14646:1:36:0,-120.429,-1306.33	0/0:220:220,0:220:7837:0:0:0,-66.2266,-703.545	0/1:273:140,133:140:4992:133:4771:-345.613,0,-364.99	0/1:396:180,216:180:6432:216:7764:-578.685,0,-458.538	0/1:15:8,7:8:288:7:252:-18.3269,0,-21.7307	0/0:259:259,0:259:9224:0:0:0,-77.9668,-826.774	0/1:84:41,43:41:1472:43:1519:-111.673,0,-106.994	0/1:37:15,22:15:540:22:792:-60.4317,0,-37.7752	0/0:236:236,0:236:8344:0:0:0,-71.0431,-745.919	0/1:69:25,44:25:896:44:1584:-121.614,0,-59.1472	0/0:28:28,0:28:991:0:0:0,-8.42884,-89.4119	0/1:44:21,23:21:748:23:828:-61.2589,0,-54.1173	0/1:124:56,68:56:1991:68:2438:-179.745,0,-141.507	0/0:126:126,0:126:4490:0:0:0,-37.9298,-403.036	0/1:22:5,17:5:176:17:593:-47.0335,0,-9.55185	0/1:362:185,177:185:6605:177:6335:-460.39,0,-484.161	0/0:343:339,4:339:12132:4:144:0,-89.9493,-1074.2	0/1:95:49,46:49:1764:46:1648:-119.195,0,-130.199	0/1:209:119,90:119:4259:90:3217:-226.216,0,-318.628	0/1:354:147,207:147:5250:207:7353:-553.921,0,-364.975	0/0:125:124,1:124:4428:1:36:0,-34.0331,-394.372	0/0:19:19,0:19:666:0:0:0,-5.71957,-60.1839	0/1:90:45,45:45:1607:45:1616:-118.23,0,-117.577	0/0:85:85,0:85:3039:0:0:0,-25.5875,-273.149	0/1:33:13,20:13:468:20:716:-54.5998,0,-32.4084	0/0:210:210,0:210:7475:0:0:0,-63.2163,-669.333	0/1:118:59,59:59:2120:59:2110:-153.519,0,-155.087	0/0:369:369,0:369:13129:0:0:0,-111.08,-1177.62	0/0:353:353,0:353:12556:0:0:0,-106.264,-1125.97	0/1:365:179,186:179:6354:186:6656:-486.689,0,-460.719	0/0:222:222,0:222:7902:0:0:0,-66.8287,-709.116	0/1:22:17,5:17:595:5:177:-9.60134,0,-47.2309	0/0:240:238,2:238:8460:2:72:0,-65.4202,-752.767	0/0:262:260,0:260:9244:0:0:0,-78.2678,-827.148	0/0:446:446,0:446:15894:0:0:0,-134.259,-1420.41	0/1:82:46,36:46:1631:36:1279:-89.398,0,-119.946	0/1:65:23,42:23:820:42:1499:-114.476,0,-53.6635	0/0:75:75,0:75:2660:0:0:0,-22.5772,-239.197	0/0:140:140,0:140:4955:0:0:0,-42.1442,-441.702	0/1:47:23,24:23:816:24:851:-62.0989,0,-58.9531	0/1:66:37,29:37:1303:29:1036:-73.6399,0,-97.6515	0/1:67:35,32:35:1251:32:1120:-80.1707,0,-91.8162	0/1:39:25,14:25:855:14:496:-33.1511,0,-64.874	0/1:67:35,32:35:1219:32:1144:-81.4088,0,-89.4794	0/1:73:33,40:33:1175:40:1413:-105.107,0,-83.9459	0/0:231:231,0:231:8284:0:0:0,-69.5379,-741.689	0/0:97:97,0:97:3439:0:0:0,-29.1999,-308.928
chr09	23895565	.	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chr09	23929656	.	ACGA	ATGC,ATGA	239639	PASS	AB=0.606552,0.386207;ABP=288.989,329.18;AC=150,38;AF=0.797872,0.202128;AN=188;AO=9656,1161;CIGAR=1M1X1M1X,1M1X2M;DP=10880;DPB=10883.2;DPRA=0,0.712407;EPP=18847.3,2524.09;EPPR=5.18177;GTI=3;LEN=4,1;MEANALT=2.17021,2.61538;MQM=59.9463,59.9371;MQMR=60;NS=94;NUMALT=2;ODDS=0.181511;PAIRED=0,0;PAIREDR=0;PAO=4.33333,4.33333;PQA=147.333,147.333;PQR=147.333;PRO=4.33333;QA=335071,41593;QR=34;RO=1;RPL=9405,1161;RPP=18847.3,2524.09;RPPR=5.18177;RPR=251,0;RUN=1,1;SAF=0,0;SAP=20970.7,2524.09;SAR=9656,1161;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:37:0,36,0:0:0:36,0:1239,0:-111.593,-10.8371,0,-111.593,-10.8371,-111.593	1/2:129:0,92,37:0:0:92,37:3190,1317:-366.969,-107.692,-79.997,-259.631,0,-248.493	1/2:61:0,44,17:0:0:44,17:1540,612:-175.584,-50.2959,-37.0506,-125.645,0,-120.527	1/1:233:0,231,0:0:0:231,0:8082,0:-727.173,-69.5379,0,-727.173,-69.5379,-727.173	1/2:43:0,24,19:0:0:24,19:842,684:-124.687,-56.1708,-48.946,-68.8718,0,-63.1523	1/2:46:0,26,20:0:0:26,20:915,720:-133.59,-59.1082,-51.2814,-74.8384,0,-68.8178	1/2:123:0,89,34:0:0:89,34:3124,1216:-353.735,-99.5115,-72.7199,-254.579,0,-244.344	1/1:156:0,155,0:0:0:155,0:5292,0:-476.154,-46.6597,0,-476.154,-46.6597,-476.154	1/2:74:0,49,25:0:0:49,25:1703,896:-211.881,-73.4346,-58.6841,-138.801,0,-131.275	1/1:92:0,92,0:0:0:92,0:3170,0:-285.518,-27.6948,0,-285.518,-27.6948,-285.518	1/1:113:0,113,0:0:0:113,0:3862,0:-347.783,-34.0164,0,-347.783,-34.0164,-347.783	1/1:42:0,40,0:0:0:40,0:1367,0:-122.964,-12.0412,0,-122.964,-12.0412,-122.964	1/1:52:0,52,0:0:0:52,0:1796,0:-161.859,-15.6536,0,-161.859,-15.6536,-161.859	1/1:57:0,55,0:0:0:55,0:1921,0:-172.804,-16.5567,0,-172.804,-16.5567,-172.804	1/2:35:0,21,14:0:0:21,14:731,504:-100.917,-41.4837,-35.162,-59.7886,0,-55.5742	1/2:39:0,17,22:0:0:17,22:562,792:-110.414,-64.983,-59.8655,-45.7743,0,-39.1517	1/2:35:0,19,16:0:0:19,16:644,567:-98.7532,-46.5442,-40.8247,-52.5561,0,-47.7396	1/2:44:0,20,24:0:0:20,24:708,860:-128.166,-70.4971,-64.4765,-58.0243,0,-50.7996	1/1:89:0,88,0:0:0:88,0:3063,0:-275.539,-26.4906,0,-275.539,-26.4906,-275.539	1/1:223:0,223,0:0:0:223,0:7770,0:-699.333,-67.1297,0,-699.333,-67.1297,-699.333	1/1:141:0,141,0:0:0:141,0:4803,0:-432.438,-42.4452,0,-432.438,-42.4452,-432.438	1/2:68:0,32,36:0:0:32,36:1116,1288:-195.99,-105.232,-95.5995,-90.9589,0,-80.1218	1/2:44:0,36,8:0:0:36,8:1253,288:-125.735,-23.8592,-13.0221,-102.233,0,-99.825	1/1:145:0,144,0:0:0:144,0:5035,0:-453.026,-43.3483,0,-453.026,-43.3483,-453.026	1/1:47:0,46,1:0:0:46,1:1602,36:-144.108,-13.8474,0,-141.17,-10.5501,-140.869	1/1:327:0,325,0:0:0:325,0:11253,0:-1012.28,-97.8348,0,-1012.28,-97.8348,-1012.28	1/2:169:0,112,56:0:0:112,56:3852,2000:-475.868,-163.056,-129.341,-312.804,0,-295.946	1/2:20:0,9,11:0:0:9,11:302,396:-57.121,-32.6714,-29.9621,-24.796,0,-21.4846	1/1:261:0,259,0:0:0:259,0:9003,0:-809.927,-77.9668,0,-809.927,-77.9668,-809.927	1/1:207:0,206,0:0:0:206,0:7188,0:-646.632,-62.0122,0,-646.632,-62.0122,-646.632	1/2:114:0,67,47:0:0:67,47:2356,1688:-329.577,-137.803,-117.634,-192.13,0,-177.981	1/1:281:0,280,0:0:0:280,0:9836,0:-884.894,-84.2884,0,-884.894,-84.2884,-884.894	1/1:138:0,134,1:0:0:134,1:4689,36:-421.853,-40.338,0,-418.916,-37.3873,-418.615	1/1:129:0,129,0:0:0:129,0:4500,0:-405.176,-38.8329,0,-405.176,-38.8329,-405.176	1/1:504:0,503,0:0:0:503,0:17563,0:-1579.98,-151.418,0,-1579.98,-151.418,-1579.98	1/1:233:0,231,1:0:0:231,1:8065,36:-725.586,-69.5379,0,-722.649,-66.5406,-722.348	1/2:145:0,56,88:0:0:56,88:1916,3144:-411.898,-256.391,-239.533,-155.551,0,-129.06	1/1:125:0,125,0:0:0:125,0:4319,0:-388.895,-37.6288,0,-388.895,-37.6288,-388.895	1/1:154:0,153,0:0:0:153,0:5275,0:-474.598,-46.0576,0,-474.598,-46.0576,-474.598	1/1:99:0,97,1:0:0:97,1:3361,36:-302.409,-29.1999,0,-299.471,-26.2026,-299.17	1/2:134:0,77,54:0:0:77,54:2670,1940:-375.266,-158.25,-135.071,-217.084,0,-200.829	1/1:69:0,69,0:0:0:69,0:2404,0:-216.616,-20.7711,0,-216.616,-20.7711,-216.616	1/1:102:0,102,0:0:0:102,0:3536,0:-318.454,-30.7051,0,-318.454,-30.7051,-318.454	1/1:50:0,50,0:0:0:50,0:1695,0:-152.831,-15.0515,0,-152.831,-15.0515,-152.831	1/1:39:0,39,0:0:0:39,0:1294,0:-116.75,-11.7402,0,-116.75,-11.7402,-116.75	1/2:43:0,19,24:0:0:19,24:679,864:-126.013,-70.6554,-64.9358,-55.5194,0,-48.2946	1/1:154:0,153,1:0:0:153,1:5326,36:-479.125,-46.0576,0,-476.188,-42.7603,-475.887	1/1:189:0,188,0:0:0:188,0:6477,0:-582.804,-56.5936,0,-582.804,-56.5936,-582.804	1/1:106:0,106,0:0:0:106,0:3708,0:-333.924,-31.9092,0,-333.924,-31.9092,-333.924	1/2:78:0,47,30:0:0:47,30:1626,1076:-219.393,-87.7622,-73.6138,-131.624,0,-122.593	1/2:198:0,120,76:0:0:120,76:4177,2724:-561.8,-222.161,-186.037,-339.635,0,-316.756	1/1:174:0,168,5:0:0:168,5:5856,180:-526.818,-50.573,0,-512.131,-35.8006,-510.625	1/1:173:0,171,0:0:0:171,0:5919,0:-532.528,-51.4761,0,-532.528,-51.4761,-532.528	1/2:39:0,29,10:0:0:29,10:1022,360:-112.939,-29.734,-21.0041,-83.5627,0,-80.5524	1/1:214:0,208,6:0:0:208,6:7245,212:-651.765,-62.6142,0,-634.5,-44.9956,-632.694	1/1:125:0,124,0:0:0:124,0:43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chr09	23929666	.	A	G	15434.2	PASS	AB=0.39446;ABP=278.94;AC=38;AF=0.202128;AN=188;AO=1177;CIGAR=1X;DP=10668;DPB=10668;DPRA=0.695138;EPP=2550.15;EPPR=18673.1;GTI=2;LEN=1;MEANALT=1.03636;MQM=59.9074;MQMR=59.9402;NS=94;NUMALT=1;ODDS=1.53585;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41984;QR=339451;RO=9488;RPL=1176;RPP=2550.15;RPPR=18673.1;RPR=1;RUN=1;SAF=0;SAP=2558.83;SAR=1177;SRF=0;SRP=20605.9;SRR=9488;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.224	0/1:129:91,38:91:3268:38:1356:-83.5076,0,-255.507	0/1:58:42,16:42:1504:16:568:-33.9921,0,-118.195	0/0:231:231,0:231:8273:0:0:0,-69.5379,-744.573	0/1:42:24,18:24:860:18:644:-45.6473,0,-65.0786	0/1:46:25,21:25:892:21:748:-53.7979,0,-66.7523	0/1:122:88,34:88:3164:34:1212:-72.6323,0,-248.128	0/0:148:148,0:148:5291:0:0:0,-44.5524,-476.325	0/1:75:49,26:49:1760:26:918:-60.3586,0,-136.098	0/0:90:88,2:88:3156:2:72:0,-20.256,-277.342	0/0:112:112,0:112:4008:0:0:0,-33.7154,-360.909	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.784	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.475	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.993	0/1:34:21,13:21:756:13:450:-30.5935,0,-58.1322	0/1:38:17,21:17:608:21:756:-56.9281,0,-43.6129	0/1:34:18,16:18:648:16:559:-40.4026,0,-48.4169	0/1:44:20,24:20:720:24:860:-64.4765,0,-51.8835	0/0:87:87,0:87:3124:0:0:0,-26.1896,-281.386	0/0:217:217,0:217:7761:0:0:0,-65.3235,-698.492	0/0:139:139,0:139:4957:0:0:0,-41.8432,-446.28	0/1:67:32,35:32:1137:35:1256:-93.1763,0,-82.468	0/1:42:33,9:33:1176:9:316:-16.1356,0,-93.5045	0/0:144:144,0:144:5135:0:0:0,-43.3483,-462.283	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:322:322,0:322:11489:0:0:0,-96.9317,-1033.83	0/1:166:111,55:111:3963:55:1956:-126.345,0,-306.873	0/1:19:8,11:8:284:11:396:-30.2632,0,-20.1838	0/0:254:254,0:254:9085:0:0:0,-76.4616,-817.352	0/0:200:200,0:200:7143:0:0:0,-60.206,-642.929	0/1:109:64,45:64:2304:45:1595:-110.791,0,-174.808	0/0:276:276,0:276:9865:0:0:0,-83.0843,-887.793	0/0:136:135,1:135:4825:1:36:0,-37.3418,-430.796	0/0:125:125,0:125:4476:0:0:0,-37.6287,-403.009	0/0:489:489,0:489:17486:0:0:0,-147.204,-1573.36	0/0:229:228,0:228:8161:0:0:0,-68.6348,-734.143	0/1:142:54,88:54:1936:88:3148:-240.798,0,-131.77	0/0:120:120,0:120:4308:0:0:0,-36.1236,-387.895	0/0:152:150,2:150:5349:2:68:0,-39.2988,-475.056	0/0:95:94,1:94:3372:1:36:0,-24.9996,-300.097	0/1:129:73,55:73:2612:55:1948:-136.815,0,-196.584	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.855	0/0:99:99,0:99:3528:0:0:0,-29.802,-317.731	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:40:40,0:40:1410:0:0:0,-12.0412,-127.195	0/1:43:19,24:19:680:24:856:-64.4168,0,-48.5849	0/0:153:152,1:152:5429:1:36:0,-42.4593,-485.14	0/0:181:180,1:180:6448:1:36:0,-50.8882,-576.808	0/0:105:104,1:104:3719:1:36:0,-28.0099,-331.313	0/1:77:47,29:47:1688:29:1044:-71.1952,0,-129.128	0/1:197:119,78:119:4268:78:2792:-192.213,0,-324.908	0/0:171:165,6:165:5912:6:212:0,-32.0513,-512.677	0/0:171:171,0:171:6131:0:0:0,-51.4761,-551.888	0/1:38:28,10:28:1008:10:360:-21.3052,0,-79.5972	0/0:213:207,6:207:7400:6:212:0,-44.6946,-646.621	0/0:123:122,1:122:4355:1:36:0,-33.4284,-388.527	0/1:32:14,18:14:492:18:640:-48.2964,0,-34.9794	0/0:304:304,0:304:10885:0:0:0,-91.5131,-979.232	0/0:255:243,12:243:8712:12:432:0,-37.5414,-744.848	0/1:58:26,32:26:936:32:1148:-86.1701,0,-67.0997	0/0:104:104,0:104:3731:0:0:0,-31.3071,-335.977	0/0:108:108,0:108:3876:0:0:0,-32.5112,-349.034	0/1:149:78,71:78:2777:71:2540:-183.998,0,-205.317	0/0:214:210,4:210:7520:4:144:0,-51.1068,-663.374	0/1:81:51,30:51:1836:30:1068:-72.0415,0,-141.137	0/1:58:41,17:41:1468:17:608:-37.5923,0,-114.956	0/1:125:86,39:86:3065:39:1392:-87.9503,0,-238.18	0/0:92:91,1:91:3241:1:36:0,-24.0965,-288.311	0/0:89:88,1:88:3156:1:36:0,-23.1934,-280.537	0/1:58:35,23:35:1247:23:828:-57.3844,0,-95.0743	0/0:54:54,0:54:1923:0:0:0,-16.2556,-173.346	0/0:76:69,7:69:2476:7:248:0,-0.214085,-200.429	0/0:175:175,0:175:6244:0:0:0,-52.6802,-562.055	0/1:50:20,30:20:720:30:1072:-81.741,0,-50.0773	0/0:130:130,0:130:4660:0:0:0,-39.1339,-419.071	0/0:203:203,0:203:7285:0:0:0,-61.1091,-655.697	0/1:66:46,20:46:1652:20:720:-45.2526,0,-128.783	0/0:83:83,0:83:2984:0:0:0,-24.9855,-268.791	0/0:82:81,1:81:2900:1:36:0,-21.0862,-257.638	0/0:126:126,0:126:4509:0:0:0,-37.9298,-405.976	0/0:77:77,0:77:2745:0:0:0,-23.1793,-247.283	0/0:202:198,4:198:7065:4:144:0,-47.4944,-622.464	0/1:70:35,35:35:1244:35:1252:-91.913,0,-91.1926	0/1:28:13,15:13:468:15:523:-38.9696,0,-34.0308	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/0:100:100,0:100:3561:0:0:0,-30.103,-320.674	0/1:34:16,18:16:572:18:635:-47.2419,0,-41.5784	0/1:59:37,22:37:1323:22:784:-53.1231,0,-101.611	0/1:38:18,20:18:644:20:712:-52.9675,0,-46.8515	0/1:56:45,11:45:1608:11:396:-19.1251,0,-128.152	0/1:199:165,34:165:5903:34:1216:-49.7967,0,-471.405	0/1:40:16,24:16:572:24:856:-65.3199,0,-39.7722	0/0:69:69,0:69:2453:0:0:0,-20.7711,-221.023	0/0:59:59,0:59:2111:0:0:0,-17.7608,-190.258
chr09	23929675	.	C	T	15115.7	PASS	AB=0.382022;ABP=358.083;AC=39;AF=0.207447;AN=188;AO=1157;CIGAR=1X;DP=10727;DPB=10727;DPRA=0.667272;EPP=2515.4;EPPR=20621.4;GTI=3;LEN=1;MEANALT=1.09804;MQM=59.9032;MQMR=59.9507;NS=94;NUMALT=1;ODDS=0.24415;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41278;QR=341367;RO=9559;RPL=1157;RPP=2515.4;RPPR=20621.4;RPR=0;RUN=1;SAF=0;SAP=2515.4;SAR=1157;SRF=0;SRP=20760.1;SRR=9559;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:37:37,0:37:1324:0:0:0,-11.1381,-119.462	0/1:130:92,38:92:3277:38:1368:-84.2869,0,-256.015	0/1:58:43,15:43:1540:15:540:-31.4768,0,-121.433	0/0:225:225,0:225:8048:0:0:0,-67.7317,-724.34	0/1:42:24,18:24:856:18:644:-45.6473,0,-64.7178	0/1:46:25,21:25:881:21:740:-53.076,0,-65.7585	0/1:123:87,36:87:3101:36:1292:-79.5253,0,-242.16	0/0:152:152,0:152:5429:0:0:0,-45.7566,-488.739	0/1:73:48,25:48:1724:25:881:-57.6307,0,-133.462	0/0:89:88,0:88:3152:0:0:0,-26.4906,-283.459	0/0:112:112,0:112:3984:0:0:0,-33.7154,-358.753	0/0:42:42,0:42:1495:0:0:0,-12.6433,-134.78	0/0:51:51,0:51:1828:0:0:0,-15.3525,-164.801	0/0:55:55,0:55:1968:0:0:0,-16.5566,-177.395	0/1:35:21,13:21:752:13:464:-31.5029,0,-57.4115	0/1:39:17,22:17:608:22:777:-58.5102,0,-43.3119	0/1:33:19,14:19:684:14:489:-34.4049,0,-51.9563	0/1:44:20,24:20:720:24:864:-64.8372,0,-51.8835	0/0:86:85,1:85:3056:1:36:0,-22.2903,-271.67	0/0:216:216,0:216:7699:0:0:0,-65.0225,-692.931	0/0:138:138,0:138:4929:0:0:0,-41.5421,-443.76	0/1:68:32,36:32:1137:36:1281:-95.1212,0,-82.1669	0/1:44:35,9:35:1248:9:320:-15.897,0,-99.3795	0/0:143:143,0:143:5105:0:0:0,-43.0473,-459.585	0/0:47:47,0:47:1684:0:0:0,-14.1484,-151.847	0/0:325:325,0:325:11607:0:0:0,-97.8347,-1044.44	0/1:166:110,56:110:3921:56:2008:-131.022,0,-303.112	0/1:20:9,10:9:324:10:356:-26.3022,0,-23.4265	0/0:258:257,0:257:9136:0:0:0,-77.3647,-821.366	0/0:206:206,0:206:7354:0:0:0,-62.0122,-661.907	0/1:109:65,44:65:2324:44:1565:-108.071,0,-176.608	0/0:278:277,0:277:9872:0:0:0,-83.3853,-888.062	0/0:137:136,1:136:4816:1:36:0,-37.6428,-429.989	0/0:128:128,0:128:4588:0:0:0,-38.5318,-413.084	0/0:497:496,0:496:17722:0:0:0,-149.311,-1594.27	0/0:232:231,0:231:8273:0:0:0,-69.5379,-744.218	0/1:142:56,86:56:2004:86:3073:-234.051,0,-137.887	0/0:121:121,0:121:4337:0:0:0,-36.4246,-390.503	0/0:152:152,0:152:5439:0:0:0,-45.7566,-489.449	0/0:99:98,1:98:3489:1:36:0,-26.2037,-310.623	0/1:130:76,53:76:2709:53:1855:-127.945,0,-204.86	0/0:68:68,0:68:2444:0:0:0,-20.47,-220.215	0/0:100:100,0:100:3546:0:0:0,-30.103,-319.347	0/0:48:48,0:48:1686:0:0:0,-14.4494,-152.022	0/0:39:39,0:39:1385:0:0:0,-11.7402,-124.946	0/1:42:18,24:18:644:24:864:-65.4393,0,-45.6473	0/0:152:150,2:150:5369:2:72:0,-38.9198,-476.503	0/0:188:188,0:188:6706:0:0:0,-56.5936,-603.615	0/0:106:106,0:106:3793:0:0:0,-31.9092,-341.566	0/1:76:48,28:48:1709:28:985:-66.0832,0,-131.168	0/1:197:120,77:120:4278:77:2772:-190.413,0,-325.893	0/0:170:165,5:165:5901:5:180:0,-34.623,-514.446	0/0:171:171,0:171:6140:0:0:0,-51.4761,-552.697	0/1:39:29,10:29:1036:10:360:-21.0041,0,-81.8137	0/0:213:208,5:208:7417:5:180:0,-47.5673,-651.026	0/0:124:124,0:124:4433:0:0:0,-37.3277,-399.14	0/1:32:15,17:15:536:17:604:-45.0576,0,-38.9419	0/0:305:304,0:304:10863:0:0:0,-91.5131,-977.208	0/0:257:248,9:248:8843:9:324:0,-47.8589,-766.349	0/1:58:26,32:26:932:32:1117:-83.3757,0,-66.7391	0/0:104:100,4:100:3556:4:144:0,-17.9935,-306.922	0/0:105:105,0:105:3757:0:0:0,-31.6081,-338.328	0/1:155:84,71:84:3000:71:2532:-181.472,0,-223.573	0/0:208:203,4:203:7250:4:144:0,-49.3594,-639.206	0/1:82:52,30:52:1868:30:1080:-72.8112,0,-143.525	0/1:61:43,18:43:1548:18:644:-39.9278,0,-121.25	0/1:125:86,39:86:3072:39:1389:-87.6782,0,-238.95	0/0:90:89,1:89:3188:1:36:0,-23.4944,-283.545	0/0:88:88,0:88:3152:0:0:0,-26.4906,-283.776	0/1:57:34,23:34:1212:23:824:-57.3246,0,-92.2276	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.638	0/1:75:68,7:68:2428:7:252:-0.451711,0,-196.199	0/0:182:182,0:182:6497:0:0:0,-54.7875,-584.815	0/1:51:22,29:22:788:29:1040:-78.5618,0,-55.8923	0/0:133:133,0:133:4738:0:0:0,-40.037,-426.087	0/0:201:201,0:201:7178:0:0:0,-60.507,-646.074	0/1:64:44,20:44:1554:20:720:-45.8547,0,-120.564	0/0:83:83,0:83:2952:0:0:0,-24.9855,-265.912	0/0:84:83,1:83:2964:1:32:0,-22.0872,-263.794	0/0:129:129,0:129:4589:0:0:0,-38.8329,-413.176	0/0:78:78,0:78:2774:0:0:0,-23.4803,-249.898	0/0:202:201,1:201:7166:1:36:0,-57.2098,-641.339	0/1:69:34,34:34:1220:34:1220:-89.277,0,-89.277	0/1:28:13,15:13:468:15:536:-40.146,0,-34.0308	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.73	0/0:100:100,0:100:3588:0:0:0,-30.103,-323.126	0/1:33:16,17:16:576:17:612:-45.4794,0,-42.241	0/1:60:38,22:38:1360:22:792:-53.5439,0,-104.639	0/1:39:18,21:18:640:21:752:-56.2661,0,-46.1891	0/1:57:46,11:46:1644:11:396:-18.824,0,-131.09	0/1:195:161,34:161:5776:34:1201:-49.6479,0,-461.223	0/1:40:17,23:17:612:23:813:-61.4479,0,-43.3722	0/0:78:78,0:78:2775:0:0:0,-23.4803,-249.991	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947
chr09	23935285	.	A	T	181864	PASS	AB=0.322332;ABP=12314.7;AC=91;AF=0.484043;AN=188;AO=14495;CIGAR=1X;DP=45161;DPB=45161;DPRA=44.1349;EPP=31478.5;EPPR=66547.8;GTI=14;LEN=1;MEANALT=1.16129;MQM=42.7345;MQMR=59.1323;NS=94;NUMALT=1;ODDS=7.0331;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=519080;QR=1097835;RO=30649;RPL=0;RPP=31478.5;RPPR=66547.8;RPR=14495;RUN=1;SAF=14495;SAP=31478.5;SAR=0;SRF=30649;SRP=66556.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:206:134,72:134:4801:72:2572:-164.957,0,-370.014	0/1:741:416,325:416:14863:325:11664:-801.316,0,-1113.2	0/1:466:306,160:306:10984:160:5736:-363.188,0,-848.059	0/1:703:462,241:462:16526:241:8640:-544.456,0,-1274.78	0/1:364:246,118:246:8805:118:4227:-257.253,0,-682.498	0/1:342:241,101:241:8621:101:3616:-213.229,0,-672.556	0/1:715:528,186:528:18937:186:6676:-372.344,0,-1488.3	0/1:866:623,243:623:22242:243:8704:-504.768,0,-1739.63	0/1:498:324,173:324:11601:173:6179:-395.551,0,-893.905	0/1:468:316,152:316:11317:152:5440:-338.396,0,-877.304	0/1:373:277,96:277:9941:96:3440:-186.886,0,-780.141	0/1:378:256,122:256:9196:122:4368:-269.402,0,-713.159	0/1:259:202,57:202:7260:57:2052:-102.258,0,-574.941	0/1:365:251,114:251:8982:114:4089:-249.54,0,-698.061	0/1:241:182,59:182:6540:59:2120:-114.171,0,-515.684	0/0:194:176,17:176:6309:17:608:0,-4.57821,-513.587	0/1:355:222,133:222:7988:133:4761:-310.966,0,-611.973	0/1:239:174,65:174:6217:65:2332:-133.584,0,-487.598	0/1:202:157,45:157:5640:45:1601:-79.4864,0,-446.598	0/1:1003:635,368:635:22769:368:13204:-855.725,0,-1743.85	0/1:798:444,354:444:15906:354:12664:-868.265,0,-1190.82	0/1:383:243,140:243:8712:140:5016:-321.604,0,-667.967	0/1:707:460,247:460:16512:247:8830:-556.911,0,-1272.19	0/1:653:448,205:448:16042:205:7340:-448.861,0,-1246.19	0/1:354:210,144:210:7532:144:5133:-343.847,0,-570.655	0/1:1685:969,713:969:34694:713:25534:-1713.23,0,-2613.05	0/1:1257:697,560:697:24939:560:20065:-1374.88,0,-1864.35	0/1:179:93,86:93:3348:86:3084:-216.339,0,-247.091	0/1:1908:1289,618:1289:46072:618:22154:-1352.79,0,-3566.85	0/1:631:498,132:498:17861:132:4725:-224.658,0,-1416.11	0/1:775:612,162:612:21898:162:5812:-276.712,0,-1734.14	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9791	0/1:53:43,10:43:1521:10:360:-15.9398,0,-121.217	0/1:66:59,7:59:2116:7:248:-2.46411,0,-170.841	0/1:40:28,12:28:992:12:432:-26.3811,0,-77.5445	0/1:59:44,15:44:1584:15:536:-29.5925,0,-125.082	0/1:847:706,141:706:25273:141:5062:-186.578,0,-2016.38	0/1:775:613,162:613:21954:162:5800:-274.468,0,-1737.89	0/1:431:252,179:252:9048:179:6420:-435.443,0,-683.273	0/1:22:15,7:15:536:7:252:-16.0224,0,-41.9503	0/1:754:403,351:403:14430:351:12564:-871.532,0,-1071.18	0/1:121:99,22:99:3552:22:777:-32.3556,0,-283.436	0/1:799:576,223:576:20685:223:7992:-460.833,0,-1618.49	0/1:393:258,135:258:9268:135:4860:-310.111,0,-715.204	0/1:264:191,73:191:6822:73:2584:-147.658,0,-533.882	0/1:380:253,127:253:9017:127:4560:-283.568,0,-696.618	0/1:502:381,121:381:13673:121:4336:-228.374,0,-1077.35	0/1:783:594,189:594:21281:189:6768:-360.022,0,-1676.55	0/1:479:362,117:362:12964:117:4177:-220.078,0,-1022.05	0/1:538:414,124:414:14820:124:4413:-223.931,0,-1171.26	0/1:621:490,130:490:17513:130:4672:-223.021,0,-1388.24	0/1:28:24,4:24:860:4:144:-4.62434,0,-69.0605	0/1:597:421,176:421:15068:176:6297:-373.245,0,-1175.69	0/1:387:237,150:237:8484:150:5377:-352.543,0,-646.948	0/0:52:48,4:48:1720:4:144:0,-2.5699,-141.993	0/1:670:492,178:492:17653:178:6333:-352.9,0,-1386.08	0/1:279:179,100:179:6416:100:3584:-230.563,0,-493.079	0/1:17:6,11:6:216:11:392:-29.5257,0,-14.6721	0/1:43:36,7:36:1296:7:252:-9.47298,0,-103.996	0/1:588:405,183:405:14486:183:6572:-398.544,0,-1125.71	0/1:554:335,217:335:12040:217:7784:-515.061,0,-916.367	0/1:27:13,14:13:468:14:500:-36.4096,0,-34.3318	0/1:830:517,313:517:18508:313:11216:-727.04,0,-1414.26	0/1:878:612,266:612:21964:266:9517:-563.123,0,-1711	0/1:408:299,109:299:10681:109:3884:-218.705,0,-838.211	0/1:358:268,90:268:9636:90:3193:-169.212,0,-759.149	0/1:714:487,227:487:17442:227:8101:-496.999,0,-1353.42	0/1:280:203,77:203:7272:77:2757:-158.624,0,-570.105	0/1:208:149,59:149:5296:59:2116:-123.579,0,-413.258	0/1:369:297,72:297:10625:72:2584:-117.075,0,-844.593	0/1:292:187,105:187:6696:105:3756:-241.035,0,-514.342	0/1:160:96,64:96:3432:64:2304:-152.541,0,-260.884	0/1:726:477,249:477:17083:249:8931:-566.822,0,-1317.75	0/1:119:93,26:93:3302:26:915:-44.7817,0,-261.458	0/1:1520:826,693:826:29475:693:24783:-1714.4,0,-2192.36	0/1:956:669,287:669:23969:287:10300:-620.048,0,-1867.81	0/1:838:549,289:549:19676:289:10344:-659.1,0,-1517.68	0/1:448:382,66:382:13661:66:2372:-75.2109,0,-1094	0/1:32:26,6:26:932:6:216:-9.66252,0,-74.5655	0/1:433:278,155:278:9968:155:5560:-353.471,0,-766.332	0/1:394:238,156:238:8528:156:5577:-372.323,0,-648.419	0/1:1050:904,146:904:32373:146:5240:-144.63,0,-2595.63	0/1:446:272,173:272:9772:173:6189:-407.634,0,-744.721	0/1:328:193,134:193:6924:134:4804:-324.303,0,-524.332	0/1:264:185,79:185:6640:79:2828:-169.271,0,-518.076	0/1:731:472,258:472:16948:258:9264:-594.87,0,-1303.85	0/1:228:150,78:150:5384:78:2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chr09	23935294	.	T	A	78889.7	PASS	AB=0.217276;ABP=29260.4;AC=84;AF=0.446809;AN=188;AO=9351;CIGAR=1X;DP=44835;DPB=44835;DPRA=10.238;EPP=20308.4;EPPR=76968.7;GTI=36;LEN=1;MEANALT=1.29348;MQM=59.3551;MQMR=52.3383;NS=94;NUMALT=1;ODDS=1.97781;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=333246;QR=1267969;RO=35444;RPL=0;RPP=20308.4;RPPR=76968.7;RPR=9351;RUN=1;SAF=9351;SAP=20308.4;SAR=0;SRF=35444;SRP=76968.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:204:122,82:122:4372:82:2916:-201.186,0,-327.745	0/0:730:667,63:667:23875:63:2218:0,-20.6427,-1923.42	0/1:466:399,67:399:14263:67:2396:-75.5475,0,-1130.15	0/1:700:461,239:461:16476:239:8531:-556.83,0,-1248.55	0/1:355:298,57:298:10685:57:2044:-77.2565,0,-843.392	0/1:342:308,33:308:11017:33:1162:-1.85883,0,-878.648	0/1:714:615,99:615:21951:99:3544:-104.146,0,-1746.07	0/1:862:666,195:666:23828:195:6909:-362.094,0,-1865.94	0/1:497:405,90:405:14491:90:3206:-139.318,0,-1143.71	0/1:460:326,134:326:11667:134:4801:-293.675,0,-899.467	0/1:369:235,134:235:8392:134:4769:-317.87,0,-632.868	0/1:377:275,100:275:9855:100:3585:-209.522,0,-764.184	0/1:261:201,58:201:7196:58:2076:-108.767,0,-564.333	0/1:358:210,148:210:7552:148:5272:-366.587,0,-563.218	0/1:237:210,27:210:7528:27:955:-14.8444,0,-601.956	0/1:182:151,31:151:5411:31:1112:-45.6039,0,-430.955	0/1:356:297,59:297:10617:59:2101:-82.1415,0,-837.696	0/1:240:205,35:205:7368:35:1252:-40.6997,0,-585.997	0/1:201:135,66:135:4852:66:2360:-151.951,0,-371.998	0/1:995:789,206:789:28237:206:7332:-359.504,0,-2208.43	0/1:805:637,168:637:22763:168:6002:-297.876,0,-1772.92	0/1:384:327,56:327:11714:56:1985:-63.3582,0,-923.258	0/1:704:607,96:607:21696:96:3425:-96.1754,0,-1714.28	0/1:652:408,244:408:14593:244:8731:-589.209,0,-1100.96	0/1:350:272,78:272:9707:78:2763:-143.423,0,-757.35	0/1:1684:1261,418:1261:45117:418:14861:-830.293,0,-3475.93	0/1:1244:1077,167:1077:38474:167:5962:-161.886,0,-3034.73	0/0:178:165,13:165:5924:13:468:0,-11.1246,-482.795	0/1:1904:1451,453:1451:51988:453:16083:-872.2,0,-4034.93	0/1:621:429,191:429:15294:191:6807:-425.466,0,-1178.04	0/1:758:625,133:625:22322:133:4780:-201.993,0,-1765.28	0/1:12:10,2:10:360:2:72:-3.22436,0,-29.1279	0/1:53:41,12:41:1476:12:428:-22.9042,0,-116.33	0/0:63:63,0:63:2256:0:0:0,-18.9649,-202.991	0/1:39:30,9:30:1049:9:290:-14.6657,0,-82.2135	0/1:59:47,12:47:1669:12:428:-21.098,0,-131.51	0/1:838:725,113:725:26020:113:4047:-111.566,0,-2072.34	0/1:769:525,244:525:18746:244:8695:-550.335,0,-1438.31	0/1:425:307,118:307:11013:118:4214:-251.016,0,-849.661	0/1:22:16,6:16:557:6:182:-10.0552,0,-43.4675	0/1:748:651,97:651:23308:97:3431:-83.7885,0,-1842	0/1:116:74,42:74:2660:42:1512:-101.455,0,-203.208	0/1:798:576,221:576:20598:221:7833:-463.81,0,-1594.81	0/1:397:324,73:324:11623:73:2616:-116.032,0,-917.382	0/1:266:204,61:204:7289:61:2136:-112.177,0,-569.009	0/1:381:320,61:320:11463:61:2147:-78.7553,0,-902.084	0/1:498:348,150:348:12448:150:5353:-330.692,0,-959.03	0/1:782:565,216:565:20168:216:7684:-455.599,0,-1563.24	0/1:468:325,143:325:11596:143:5120:-319.752,0,-889.694	0/1:531:462,69:462:16530:69:2454:-61.2635,0,-1314.48	0/1:613:497,115:497:17813:115:4120:-186.228,0,-1406.98	0/1:28:21,7:21:756:7:252:-14.6001,0,-59.451	0/1:592:426,166:426:15269:166:5957:-357.596,0,-1181.55	0/1:387:338,48:338:12066:48:1701:-36.8158,0,-954.147	0/1:51:45,6:45:1616:6:216:-4.43798,0,-130.144	0/1:663:559,104:559:19932:104:3687:-132.304,0,-1578.28	0/1:283:231,52:231:8252:52:1856:-82.0834,0,-648.414	0/0:17:16,1:16:576:1:36:0,-1.51923,-47.5522	0/1:43:33,10:33:1184:10:345:-18.4365,0,-93.3162	0/1:578:483,94:483:17261:94:3357:-128.243,0,-1362.63	0/1:550:387,163:387:13874:163:5825:-358.43,0,-1063.45	0/0:25:24,1:24:864:1:36:0,-3.92747,-73.8135	0/1:830:748,82:748:26656:82:2903:-11.5002,0,-2115.68	0/1:867:678,189:678:24325:189:6734:-344.734,0,-1899.67	0/1:404:341,63:341:12175:63:2250:-81.1035,0,-965.133	0/0:358:339,19:339:12140:19:665:0,-47.6328,-1020.12	0/0:702:655,47:655:23423:47:1684:0,-59.5764,-1936.85	0/1:282:194,88:194:6914:88:3145:-198.276,0,-530.582	0/1:205:142,63:142:5073:63:2242:-140.162,0,-390.498	0/0:364:333,31:333:11936:31:1104:0,-10.1475,-969.225	0/1:288:177,108:177:6343:108:3853:-260.613,0,-475.493	0/1:155:134,21:134:4808:21:756:-21.6708,0,-380.196	0/1:721:500,218:500:17893:218:7703:-476.478,0,-1376.16	0/1:118:98,20:98:3493:20:720:-29.6072,0,-276.597	0/1:1507:1110,396:1110:39605:396:14059:-810.122,0,-3049.72	0/1:951:754,197:754:26988:197:7058:-348.543,0,-2121.8	0/1:835:736,98:736:26228:98:3493:-62.994,0,-2088.38	0/1:444:351,93:351:12569:93:3332:-166.404,0,-993.38	0/0:32:32,0:32:1133:0:0:0,-9.63296,-101.789	0/1:430:329,101:329:11793:101:3609:-195.47,0,-914.601	0/1:392:312,80:312:11145:80:2865:-139.935,0,-872.494	0/1:1027:713,313:713:25527:313:11161:-694.49,0,-1977.13	0/1:451:386,64:386:13788:64:2292:-70.5408,0,-1088.85	0/1:328:297,31:297:10664:31:1112:-1.64645,0,-851.115	0/1:264:178,86:178:6371:86:3088:-198.586,0,-487.978	0/1:726:554,169:554:19853:169:6041:-325.504,0,-1548.81	0/0:226:206,20:206:7396:20:716:0,-3.30646,-595.72	0/1:258:204,53:204:7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chr09	23935300	.	C	T	188293	PASS	AB=0.327335;ABP=11659.8;AC=91;AF=0.484043;AN=188;AO=14756;CIGAR=1X;DP=45271;DPB=45271;DPRA=37.4342;EPP=32045.3;EPPR=66007.3;GTI=14;LEN=1;MEANALT=1.13978;MQM=42.7438;MQMR=59.1347;NS=94;NUMALT=1;ODDS=27.1839;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=529078;QR=1091301;RO=30500;RPL=0;RPP=32045.3;RPPR=66007.3;RPR=14756;RUN=1;SAF=14756;SAP=32045.3;SAR=0;SRF=30500;SRP=66232.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:206:132,74:132:4711:74:2660:-172.592,0,-361.903	0/1:742:414,328:414:14818:328:11761:-810.115,0,-1108.8	0/1:468:306,162:306:10958:162:5786:-367.467,0,-845.092	0/1:706:460,246:460:16482:246:8818:-559.148,0,-1269.92	0/1:363:247,116:247:8851:116:4164:-253.171,0,-686.647	0/1:339:242,97:242:8646:97:3480:-202.052,0,-675.726	0/1:721:526,194:526:18880:194:6938:-394.429,0,-1481.35	0/1:863:621,242:621:22220:242:8688:-503.893,0,-1738.68	0/1:499:325,174:325:11618:174:6243:-400.782,0,-895.188	0/1:467:315,152:315:11287:152:5459:-339.28,0,-874.904	0/1:375:274,100:274:9818:100:3596:-199.27,0,-769.889	0/1:378:253,124:253:9071:124:4456:-277.227,0,-702.043	0/1:259:199,60:199:7143:60:2156:-111.479,0,-564.418	0/1:365:248,117:248:8872:117:4203:-259.566,0,-688.177	0/1:241:181,60:181:6504:60:2151:-116.934,0,-512.45	0/0:191:174,17:174:6252:17:612:0,-3.29602,-508.269	0/1:360:224,136:224:8040:136:4873:-318.765,0,-615.143	0/1:243:177,66:177:6335:66:2372:-135.917,0,-496.824	0/1:204:156,48:156:5599:48:1728:-90.0847,0,-442.378	0/1:1006:634,372:634:22713:372:13355:-867.419,0,-1739.68	0/1:812:444,368:444:15847:368:13186:-908.29,0,-1181.32	0/1:386:242,143:242:8668:143:5114:-328.718,0,-663.146	0/1:708:454,253:454:16256:253:9048:-574.673,0,-1248.7	0/1:659:447,212:447:15974:212:7584:-468.645,0,-1238.21	0/1:349:205,144:205:7340:144:5149:-346.305,0,-555.388	0/1:1698:977,720:977:34920:720:25852:-1735.58,0,-2628.54	0/1:1256:697,559:697:24944:559:20011:-1372.53,0,-1865.06	0/1:180:94,86:94:3368:86:3092:-216.676,0,-248.712	0/1:1913:1289,624:1289:46173:624:22395:-1371.12,0,-3575.83	0/1:630:496,134:496:17747:134:4816:-232.818,0,-1406.09	0/1:770:606,162:606:21700:162:5820:-278.957,0,-1719.74	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.094	0/1:52:42,10:42:1500:10:360:-16.2409,0,-119.632	0/1:65:58,7:58:2072:7:252:-3.11286,0,-167.184	0/1:38:27,11:27:972:11:396:-23.8005,0,-76.3494	0/1:55:41,14:41:1472:14:504:-28.4133,0,-116.211	0/1:842:698,144:698:24982:144:5156:-195.93,0,-1991.88	0/1:779:612,167:612:21821:167:5987:-288.712,0,-1725.5	0/1:427:248,179:248:8900:179:6415:-436.232,0,-671.172	0/1:22:15,7:15:540:7:252:-16.0224,0,-42.3121	0/1:768:404,364:404:14469:364:13048:-911.959,0,-1070.5	0/1:118:96,22:96:3432:22:792:-34.6155,0,-273.547	0/1:801:574,227:574:20567:227:8151:-474.861,0,-1605.96	0/1:401:260,141:260:9297:141:5064:-325.978,0,-715.442	0/1:267:185,82:185:6608:82:2948:-177.755,0,-513.804	0/1:384:251,133:251:8983:133:4757:-299.007,0,-692.361	0/1:498:375,122:375:13394:122:4371:-232.923,0,-1055.05	0/1:786:589,197:589:21070:197:7056:-384.498,0,-1656.7	0/1:480:360,120:360:12882:120:4299:-230.093,0,-1014.34	0/1:542:414,128:414:14840:128:4579:-234.018,0,-1171.81	0/1:623:493,130:493:17589:130:4663:-221.579,0,-1394.39	0/1:28:24,4:24:864:4:144:-4.62434,0,-69.4212	0/1:596:419,177:419:15027:177:6343:-377.835,0,-1172.26	0/1:393:240,153:240:8605:153:5481:-359.961,0,-656.026	0/0:52:48,4:48:1720:4:144:0,-2.5699,-141.992	0/1:668:487,179:487:17384:179:6413:-360.835,0,-1362.85	0/1:283:178,105:178:6367:105:3743:-244.018,0,-487.456	0/1:17:6,11:6:212:11:396:-29.8385,0,-14.3064	0/1:43:36,7:36:1287:7:252:-9.47298,0,-103.185	0/1:583:398,185:398:14247:185:6625:-404.293,0,-1105.45	0/1:554:331,223:331:11849:223:7998:-533.696,0,-898.986	0/1:27:13,14:13:468:14:500:-36.4421,0,-34.3318	0/1:839:519,320:519:18550:320:11454:-745.82,0,-1415.39	0/1:878:610,268:610:21835:268:9626:-573.951,0,-1699.5	0/1:410:294,116:294:10514:116:4154:-241.204,0,-822.574	0/1:358:259,99:259:9229:99:3532:-198.175,0,-722.626	0/1:711:481,230:481:17197:230:8225:-508.317,0,-1331.48	0/1:278:200,77:200:7164:77:2764:-158.607,0,-561.109	0/1:209:149,59:149:5334:59:2108:-122.664,0,-416.914	0/1:367:293,74:293:10490:74:2634:-122.096,0,-833.08	0/1:284:184,100:184:6600:100:3596:-229.373,0,-508.135	0/1:160:96,64:96:3412:64:2285:-151.577,0,-258.614	0/1:722:472,249:472:16839:249:8914:-566.856,0,-1297.41	0/1:121:96,25:96:3406:25:891:-41.5043,0,-270.178	0/1:1525:818,707:818:29199:707:25360:-1762.61,0,-2166.21	0/1:967:671,296:671:23992:296:10619:-644.879,0,-1866.67	0/1:847:554,293:554:19771:293:10505:-670.491,0,-1523.47	0/1:447:382,65:382:13642:65:2340:-72.6564,0,-1092.58	0/1:31:25,6:25:896:6:216:-9.96355,0,-71.628	0/1:431:276,155:276:9851:155:5572:-356.101,0,-756.122	0/1:400:234,166:234:8388:166:5964:-403.655,0,-634.089	0/1:1044:898,145:898:32137:145:5212:-143.84,0,-2575.63	0/1:449:267,182:267:9558:182:6548:-437.622,0,-724.761	0/1:336:195,141:195:6991:141:5068:-345.063,0,-528.001	0/1:264:183,81:183:6530:81:2906:-176.489,0,-508.185	0/1:732:467,265:467:16750:265:9508:-616.31,0,-1285.91	0/1:226:149,77:149:5330:77: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chr09	23935323	.	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chr09	23935329	.	CT	CC,TC	823618	PASS	AB=0.768662,0.228789;ABP=27054.9,27570.7;AC=98,90;AF=0.521277,0.478723;AN=188;AO=34229,9980;CIGAR=1M1X,2X;DP=44320;DPB=44321.5;DPRA=0,0;EPP=74321.7,21674.3;EPPR=22.5536;GTI=10;LEN=1,2;MEANALT=2.79787,2.79787;MQM=56.8345,42.9928;MQMR=60;NS=94;NUMALT=2;ODDS=14470.1;PAIRED=0,0;PAIREDR=0;PAO=0,3;PQA=0,108;PQR=0;PRO=0;QA=1194127,344538;QR=297;RO=9;RPL=34228,9980;RPP=74321.7,21674.3;RPPR=22.5536;RPR=1,0;RUN=1,1;SAF=34229,9980;SAP=74330.3,21674.3;SAR=0,0;SRF=9;SRP=22.5536;SRR=0;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:202:0,149,53:0:0:149,53:5142,1779:-557.734,-140.858,-96.0046,-417.209,0,-401.254	1/2:728:0,539,188:0:0:539,188:18847,6637:-2048.96,-528.813,-366.558,-1520.14,0,-1463.54	1/1:450:0,407,43:0:0:407,43:14157,1509:-1265.01,-122.519,0,-1144.19,-1.34695,-1131.24	1/2:685:0,528,155:0:0:528,155:18519,5340:-1921.29,-423.684,-264.741,-1497.69,0,-1451.03	1/2:360:0,301,58:0:0:301,58:10515,2010:-1007.34,-158.673,-68.0628,-848.651,0,-831.191	1/2:332:0,264,66:0:0:264,66:9247,2274:-928.59,-180.115,-100.643,-748.509,0,-728.641	1/2:707:2,591,113:2:61:591,113:20726,3875:-1983.81,-302.098,-129.075,-1677.48,0,-1648.35	1/2:841:0,683,157:0:0:683,157:23766,5421:-2357.18,-432.302,-226.698,-1924.98,0,-1877.72	1/2:488:0,424,62:0:0:424,62:14838,2148:-1372.3,-171.164,-43.5268,-1201.2,0,-1182.53	1/2:464:0,375,89:0:0:375,89:13129,3129:-1311.69,-247.305,-134.419,-1064.73,0,-1037.94	1/2:371:0,320,51:0:0:320,51:11009,1777:-1027.89,-140.413,-44.0836,-887.812,0,-872.459	1/2:372:0,307,63:0:0:307,63:10566,2192:-1028.02,-173.368,-80.9517,-854.713,0,-835.748	1/2:251:0,222,29:0:0:222,29:7733,1014:-707.295,-81.4384,-14.6097,-626.201,0,-617.471	1/2:356:0,307,49:0:0:307,49:10619,1719:-994.969,-135.304,-42.8878,-860.005,0,-845.254	1/2:238:0,205,33:0:0:205,33:7149,1153:-671.628,-91.4165,-29.7053,-580.553,0,-570.619	1/2:185:0,165,19:0:0:165,19:5651,670:-512.023,-53.558,-3.88802,-458.556,0,-452.837	1/2:350:0,244,104:0:0:244,104:8459,3635:-973.109,-288.271,-214.819,-684.903,0,-653.596	1/2:235:0,182,53:0:0:182,53:6295,1861:-658.71,-149.271,-94.4836,-509.784,0,-493.829	1/2:200:0,151,49:0:0:151,49:5243,1714:-561.778,-135.803,-90.3473,-426.317,0,-411.567	1/2:987:0,700,284:0:0:700,284:24450,9791:-2756.37,-773.096,-562.375,-1983.32,0,-1897.83	1/2:790:0,582,205:0:0:582,205:20249,6999:-2186.27,-553.104,-377.905,-1633.24,0,-1571.53	1/2:380:0,235,142:0:0:235,142:8307,4933:-1065.06,-388.71,-317.968,-676.451,0,-633.704	1/2:692:0,615,76:0:0:615,76:21474,2638:-1937.63,-210.019,-24.8854,-1727.6,0,-1704.72	1/2:636:0,446,189:0:0:446,189:15673,6508:-1790.17,-516.195,-381.936,-1273.97,0,-1217.07	1/2:342:0,242,99:0:0:242,99:8405,3413:-950.664,-269.331,-196.481,-681.368,0,-651.566	1/2:1658:0,1139,515:0:0:1139,515:39864,18043:-4636.02,-1419.79,-1076.91,-3216.33,0,-3061.3	1/2:1236:1,840,394:1:36:840,394:29318,13499:-3433.46,-1067.33,-817.403,-2363.53,0,-2247.86	1/2:179:0,134,45:0:0:134,45:4692,1590:-504.3,-125.198,-84.8596,-379.446,0,-365.9	1/2:1872:0,1441,424:0:0:1441,424:50545,14681:-5245.32,-1158.32,-724.54,-4087.03,0,-3959.39	1/2:619:0,488,131:0:0:488,131:17077,4596:-1753.03,-364.713,-217.81,-1388.66,0,-1349.23	1/2:755:0,592,160:0:0:592,160:20704,5505:-2118.81,-436.095,-257.885,-1682.77,0,-1634.6	1/2:13:0,9,4:0:0:9,4:307,144:-36.9566,-12.1095,-9.40023,-25.201,0,-23.9969	1/2:53:0,38,15:0:0:38,15:1319,532:-150.085,-43.3021,-31.863,-107.133,0,-102.618	1/2:63:0,21,42:0:0:21,42:744,1458:-179.144,-118.569,-112.247,-60.9268,0,-48.2836	1/2:38:0,25,13:0:0:25,13:865,447:-106.326,-36.3105,-28.7847,-70.3576,0,-66.4442	1/2:56:0,35,21:0:0:35,21:1226,717:-157.277,-57.5727,-47.0367,-100.045,0,-93.7236	1/2:822:0,677,144:0:0:677,144:23381,4987:-2290.69,-392.788,-188.99,-1898.01,0,-1854.66	1/2:758:2,591,159:2:56:591,159:20709,5465:-2111.57,-428.997,-255.525,-1678.83,0,-1635.4	1/2:417:0,353,63:0:0:353,63:12160,2157:-1152.47,-171.139,-64.8758,-981.419,0,-962.454	1/2:21:0,17,4:0:0:17,4:608,144:-61.3035,-11.8951,-6.77757,-49.7629,0,-48.5588	1/2:749:0,535,210:0:0:535,210:18702,7189:-2077.76,-569.792,-408.741,-1507.98,0,-1444.77	1/2:117:0,97,20:0:0:97,20:3352,711:-329.288,-56.9569,-27.757,-272.678,0,-266.658	1/2:786:0,623,160:0:0:623,160:21858,5582:-2214.56,-439.889,-252.348,-1774.77,0,-1726.6	1/2:388:0,324,64:0:0:324,64:11222,2232:-1085.26,-176.731,-79.1972,-908.87,0,-889.604	1/2:254:0,203,49:0:0:203,49:7048,1558:-693.224,-123.087,-61.9777,-570.174,0,-555.423	1/2:379:0,246,133:0:0:246,133:8584,4602:-1059.98,-362.466,-288.413,-697.859,0,-657.822	1/2:495:0,421,73:0:0:421,73:14678,2496:-1387,-198.514,-71.7802,-1188.62,0,-1166.65	1/2:767:0,652,115:0:0:652,115:22718,3971:-2157.4,-315.557,-119.285,-1842.19,0,-1807.57	1/2:472:0,404,64:0:0:404,64:14219,2219:-1326.28,-175.344,-53.7281,-1150.96,0,-1131.69	1/2:527:0,398,129:0:0:398,129:13985,4471:-1490.66,-352.672,-232.863,-1138.32,0,-1099.49	1/2:615:0,481,131:0:0:481,131:16873,4508:-1729.45,-357.087,-212.291,-1372.46,0,-1333.02	1/2:28:0,23,5:0:0:23,5:792,178:-78.7191,-14.6292,-7.7055,-64.4393,0,-62.9342	1/2:588:0,506,81:0:0:506,81:1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chr09	23935338	.	C	T	52232.9	PASS	AB=0.19818;ABP=30522.1;AC=80;AF=0.425532;AN=188;AO=8022;CIGAR=1X;DP=43924;DPB=43924;DPRA=10.7071;EPP=17422.6;EPPR=72056.8;GTI=40;LEN=1;MEANALT=1.6413;MQM=57.6065;MQMR=54.0096;NS=94;NUMALT=1;ODDS=2.22149;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=274434;QR=1169013;RO=33182;RPL=8022;RPP=17422.6;RPPR=72056.8;RPR=0;RUN=1;SAF=8022;SAP=17422.6;SAR=0;SRF=33182;SRP=72056.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:183:163,20:163:5646:20:674:-5.80854,0,-449.984	0/1:720:511,99:511:18052:99:3420:-123.091,0,-1427.95	0/1:449:289,94:289:10157:94:3202:-172.677,0,-794.595	0/1:689:515,83:515:18146:83:2805:-72.1853,0,-1442.3	0/1:346:188,100:188:6626:100:3441:-222.73,0,-505.154	0/1:331:208,90:208:7363:90:3072:-186.336,0,-569.041	0/1:709:635,74:635:22372:74:2462:-7.56126,0,-1787.48	0/1:839:543,211:543:19146:211:7293:-428.694,0,-1486.84	0/1:488:386,43:386:13642:43:1476:-3.61632,0,-1092.34	0/0:461:415,43:415:14693:43:1485:0,-4.37943,-1177.39	0/1:364:230,88:230:8116:88:3012:-175.095,0,-629.013	0/1:368:295,73:295:10320:73:2450:-109.828,0,-810.093	0/1:251:159,63:159:5623:63:2134:-124.948,0,-437.519	0/1:345:292,53:292:10298:53:1823:-60.4469,0,-815.177	0/1:236:184,52:184:6456:52:1765:-87.8507,0,-506.608	0/1:189:136,53:136:4785:53:1786:-103.924,0,-372.807	0/1:351:278,38:278:9802:38:1331:-24.5643,0,-779.185	0/1:233:167,53:167:5870:53:1781:-93.9655,0,-459.189	0/1:201:178,23:178:6302:23:788:-10.6528,0,-502.62	0/1:979:882,97:882:31046:97:3310:-3.15703,0,-2472.24	0/1:765:570,96:570:19910:96:3313:-97.4882,0,-1574.18	0/0:375:349,26:349:12362:26:902:0,-31.4836,-1017.52	0/0:698:547,53:547:19258:53:1811:0,-17.9037,-1561.27	0/1:650:542,100:542:19123:100:3430:-114.915,0,-1513.12	0/1:327:261,66:261:9213:66:2249:-103.566,0,-721.545	0/1:1635:1260,176:1260:44496:176:6072:-111.679,0,-3525.24	0/1:1221:853,205:853:30029:205:6957:-307.064,0,-2354.68	0/1:178:122,39:122:4326:39:1315:-69.5396,0,-335.26	0/1:1854:1297,363:1297:45880:363:12419:-616.572,0,-3589.17	0/1:621:495,122:495:17479:122:4239:-194.952,0,-1376.85	0/1:758:510,246:510:18012:246:8446:-530.965,0,-1381.71	0/1:14:8,6:8:288:6:208:-14.7339,0,-22.053	0/1:52:39,9:39:1383:9:320:-14.3407,0,-109.558	0/0:63:63,0:63:2200:0:0:0,-18.9649,-198.006	0/1:38:26,8:26:906:8:280:-14.9629,0,-71.0112	0/0:57:54,3:54:1928:3:93:0,-8.49085,-163.663	0/1:818:600,215:600:21058:215:7376:-417.191,0,-1636.75	0/1:748:519,229:519:18331:229:7900:-484.712,0,-1409.93	0/1:414:278,90:278:9757:90:3070:-165.105,0,-759.815	0/1:22:19,3:19:676:3:95:-2.24024,0,-54.1653	0/1:740:561,108:561:19718:108:3635:-125.539,0,-1553.96	0/1:119:91,28:91:3184:28:932:-48.3447,0,-249.66	0/1:779:614,164:614:21568:164:5676:-276.185,0,-1688.78	0/1:397:307,90:307:10858:90:3136:-162.675,0,-849.034	0/1:242:203,38:203:7057:38:1305:-44.7538,0,-559.181	0/1:377:319,58:319:11255:58:1946:-60.2377,0,-887.696	0/1:486:338,93:338:11929:93:3207:-158.682,0,-938.72	0/1:749:492,257:492:17410:257:8799:-564.604,0,-1331.74	0/1:472:369,48:369:13051:48:1641:-22.0687,0,-1043.08	0/1:520:407,112:407:14335:112:3785:-184.163,0,-1123.9	0/0:601:549,52:549:19345:52:1755:0,-23.1814,-1573.52	0/1:27:22,5:22:771:5:176:-8.05314,0,-61.3947	0/1:578:355,132:355:12646:132:4453:-253.955,0,-985.806	0/0:380:351,29:351:12444:29:1028:0,-21.5825,-1012.49	0/1:53:30,23:30:1067:23:793:-55.7228,0,-80.1619	0/1:639:485,153:485:16983:153:5167:-272.573,0,-1323.66	0/1:272:213,59:213:7520:59:2026:-100.216,0,-587.918	0/0:17:14,1:14:500:1:32:0,-1.64495,-41.3558	0/1:43:39,4:39:1366:4:144:-0.365606,0,-109.862	0/1:568:343,142:343:12048:142:4918:-295.957,0,-930.49	0/1:546:404,82:404:14274:82:2814:-106.677,0,-1126.07	0/0:26:25,0:25:879:0:0:0,-7.52575,-78.4102	0/1:791:583,208:583:20559:208:7202:-409.418,0,-1586.89	0/1:867:630,126:630:22256:126:4324:-161.102,0,-1761.8	0/1:402:307,50:307:10861:50:1755:-50.2984,0,-864.975	0/1:341:192,117:192:6743:117:3906:-258.3,0,-506.418	0/1:689:523,162:523:18449:162:5565:-292.824,0,-1438.7	0/1:274:222,48:222:7768:48:1644:-66.5843,0,-611.269	0/1:204:162,24:162:5717:24:856:-20.8319,0,-455.932	0/1:344:237,107:237:8348:107:3619:-222.27,0,-643.802	0/1:282:239,43:239:8356:43:1461:-46.7841,0,-659.163	0/0:159:134,9:134:4729:9:311:0,-15.0721,-391.931	0/0:679:641,38:641:22422:38:1272:0,-89.8426,-1888.11	0/1:117:84,26:84:2943:26:920:-49.5539,0,-230.578	0/0:1482:1226,98:1226:43164:98:3367:0,-95.9099,-3540.47	0/1:940:744,193:744:26268:193:6531:-305.289,0,-2063.77	0/1:826:568,196:568:20019:196:6726:-374.835,0,-1559.19	0/1:433:259,174:259:9157:174:5984:-408.116,0,-690.293	0/0:30:24,1:24:856:1:36:0,-4.28225,-73.7293	0/1:412:293,75:293:10329:75:2521:-115.968,0,-809.494	0/1:385:225,114:225:7851:114:3868:-245.699,0,-598.267	0/1:1026:804,221:804:28433:221:7532:-367.702,0,-2239.31	0/1:449:327,73:327:11494:73:2517:-105.829,0,-903.349	0/0:325:280,25:280:9926:25:875:0,-13.1849,-806.892	0/1:251:211,40:211:7332:40:1336:-44.9458,0,-579.277	0/1:718:554,163:554:19470:163:5640:-290.915,0,-1519.87	0/1:225:149,61:149:5224:61:2118:-127.066,0,-403.497	0/1:250:199,51:199:6924:51:1717:-79.421,0,-543.7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chr09	23935342	.	T	A	79645	PASS	AB=0.221584;ABP=29051.6;AC=90;AF=0.478723;AN=188;AO=9656;CIGAR=1X;DP=44325;DPB=44325;DPRA=0;EPP=20970.7;EPPR=75227.2;GTI=36;LEN=1;MEANALT=1.25532;MQM=59.8579;MQMR=51.9807;NS=94;NUMALT=1;ODDS=1.84955;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=342154;QR=1236733;RO=34642;RPL=9656;RPP=20970.7;RPPR=75227.2;RPR=0;RUN=1;SAF=9656;SAP=20970.7;SAR=0;SRF=34642;SRP=75227.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:202:173,29:173:6144:29:1040:-33.1055,0,-487.395	0/1:710:561,149:561:20071:149:5300:-263.406,0,-1565.82	0/1:452:373,79:373:13331:79:2815:-117.524,0,-1050.44	0/1:693:572,121:572:20440:121:4307:-179.185,0,-1608.45	0/0:357:332,25:332:11866:25:892:0,-26.868,-972.754	0/1:334:280,54:280:9992:54:1908:-71.082,0,-790.537	0/1:711:467,243:467:16691:243:8623:-561.975,0,-1273.25	0/1:851:646,205:646:23028:205:7252:-396.564,0,-1798.15	0/1:485:363,122:363:12973:122:4333:-244.145,0,-1010.5	0/1:462:333,128:333:11897:128:4559:-271.347,0,-917.764	0/1:373:317,54:317:11302:54:1910:-60.1668,0,-892.221	0/1:374:293,80:293:10466:80:2848:-143.962,0,-820.067	0/1:248:176,72:176:6278:72:2535:-153.74,0,-485.624	0/1:355:314,41:314:11171:41:1464:-25.1895,0,-889.88	0/1:237:174,62:174:6216:62:2219:-128.581,0,-483.832	0/1:188:133,55:133:4751:55:1943:-118.549,0,-369.665	0/1:345:276,68:276:9823:68:2420:-114.181,0,-770.014	0/1:232:181,51:181:6432:51:1812:-93.1518,0,-504.5	0/1:196:136,60:136:4851:60:2132:-133.147,0,-373.24	0/1:978:672,306:672:24051:306:10803:-677.778,0,-1838.26	0/1:791:618,173:618:21995:173:6101:-311.082,0,-1708.19	0/1:386:340,45:340:12106:45:1620:-29.8336,0,-957.27	0/1:692:510,182:510:18178:182:6457:-372.746,0,-1400.63	0/1:652:552,100:552:19731:100:3537:-122.269,0,-1562.79	0/1:334:277,57:277:9852:57:2019:-81.4321,0,-775.458	0/1:1659:1313,344:1313:46895:344:12150:-594.105,0,-3638.73	0/1:1245:1095,150:1095:39169:150:5300:-102.31,0,-3096.66	0/1:178:155,23:155:5548:23:824:-20.9,0,-437.723	0/1:1881:1458,422:1458:52213:422:14990:-781.676,0,-4060.57	0/1:617:454,163:454:16198:163:5748:-331.695,0,-1259.79	0/1:751:640,111:640:22871:111:3888:-123.951,0,-1817.17	0/1:14:9,5:9:311:5:180:-12.3376,0,-24.059	0/1:50:35,15:35:1248:15:540:-33.8841,0,-96.7823	0/1:58:9,49:9:324:49:1710:-136.722,0,-11.6982	0/1:38:28,10:28:1000:10:339:-19.3984,0,-78.1322	0/1:59:30,29:30:1080:29:1020:-74.3514,0,-78.2397	0/1:825:586,237:586:20941:237:8384:-506.529,0,-1619.16	0/1:765:648,117:648:23045:117:4123:-140.963,0,-1825.95	0/0:416:382,34:382:13635:34:1211:0,-15.9335,-1104.06	0/0:20:19,1:19:675:1:36:0,-2.42232,-57.0968	0/1:754:653,101:653:23262:101:3592:-96.512,0,-1833.67	0/1:118:94,24:94:3327:24:852:-41.4779,0,-262.681	0/1:782:605,175:605:21596:175:6200:-322.196,0,-1688.88	0/1:391:304,87:304:10865:87:3097:-161.247,0,-850.478	0/1:260:178,81:178:6310:81:2849:-178.407,0,-482.605	0/1:379:324,55:324:11503:55:1956:-62.225,0,-905.278	0/1:491:368,123:368:13132:123:4376:-246.21,0,-1022.54	0/1:767:665,101:665:23828:101:3575:-91.0108,0,-1896.98	0/1:470:316,152:316:11270:152:5403:-345.182,0,-860.841	0/1:530:387,143:387:13842:143:5046:-294.739,0,-1073.02	0/1:605:377,228:377:13513:228:8113:-548.061,0,-1022.27	0/1:28:17,11:17:604:11:396:-27.5539,0,-45.8149	0/1:583:475,108:475:16975:108:3807:-167.331,0,-1337.47	0/1:382:296,86:296:10580:86:3011:-156.225,0,-822.189	0/1:48:35,13:35:1256:13:460:-27.2859,0,-98.6624	0/1:650:433,216:433:15452:216:7687:-496.081,0,-1179.24	0/1:283:244,39:244:8687:39:1392:-40.3866,0,-688.15	0/1:17:13,4:13:468:4:136:-7.45803,0,-36.316	0/1:42:30,12:30:1080:12:428:-26.2155,0,-84.262	0/1:572:496,76:496:17640:76:2671:-68.4155,0,-1397.81	0/1:546:464,82:464:16622:82:2912:-97.951,0,-1311.62	0/1:27:19,8:19:684:8:284:-17.7755,0,-52.9249	0/1:824:719,105:719:25704:105:3716:-86.5926,0,-2033.05	0/1:856:582,274:582:20800:274:9700:-615.275,0,-1585.16	0/1:396:286,109:286:10200:109:3839:-226.449,0,-789.386	0/1:355:253,102:253:8999:102:3600:-217.334,0,-690.94	0/1:700:520,180:520:18608:180:6368:-362.435,0,-1443.5	0/1:268:207,61:207:7398:61:2172:-115.064,0,-580.305	0/1:203:147,56:147:5266:56:1956:-115.196,0,-407.782	0/1:351:254,97:254:9087:97:3454:-205.039,0,-707.943	0/1:287:256,31:256:9123:31:1096:-12.5534,0,-725.471	0/1:153:114,39:114:4067:39:1371:-77.6293,0,-312.261	0/1:702:496,206:496:17665:206:7319:-446.978,0,-1359.91	0/1:116:100,15:100:3544:15:536:-13.6629,0,-282.268	0/1:1494:1198,296:1198:42703:296:10490:-493.554,0,-3330.46	0/1:947:693,253:693:24807:253:8947:-520.102,0,-1925.83	0/1:826:684,142:684:24426:142:5000:-201.504,0,-1928.63	0/1:434:340,93:340:12187:93:3270:-163.788,0,-962.028	0/1:30:8,22:8:288:22:776:-61.1313,0,-16.7433	0/1:428:341,87:341:12202:87:3073:-147.949,0,-951.509	0/0:388:352,36:352:12564:36:1288:0,-0.57645,-1001.67	0/1:1023:691,331:691:24680:331:11779:-751.968,0,-1900.65	0/1:449:388,61:388:13823:61:2163:-59.7715,0,-1092.52	0/1:329:239,90:239:8540:90:3207:-189.813,0,-659.773	0/1:255:207,48:207:7363:48:1718:-78.1412,0,-579.81	0/1:719:598,121:598:21260:121:4316:-172.172,0,-1678.08	0/1:227:186,41:186:6603:41:1476:-64.8012,0,-520.899	0/1:252:211,40:211:7530:40:1414:-51.6368,0,-595.764	0/1:284:204,80:204:7266:80:2838:-170.165,0,-559.358	0/1:212:180,32:180:6460:32:1144:-39.4503,0,-510.082	0/1:640:567,73:567:20217:73:2604:-41.9442,0,-1600.93	0/1:274:241,32:241:8601:32:1128:-19.295,0,-681.115	0/1:550:352,198:352:12571:198:7001:-463.074,0,-947.241	0/1:414:305,109:305:10896:109:3860:-222.908,0,-845.456
chr09	23935346	.	G	A	136394	PASS	AB=0.283203;ABP=17862.1;AC=91;AF=0.484043;AN=188;AO=12409;CIGAR=1X;DP=44000;DPB=44000;DPRA=33.7834;EPP=26948.8;EPPR=68569.4;GTI=23;LEN=1;MEANALT=1.15054;MQM=42.2389;MQMR=58.2273;NS=94;NUMALT=1;ODDS=5.5591;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=443373;QR=1118667;RO=31576;RPL=12409;RPP=26948.8;RPPR=68569.4;RPR=0;RUN=1;SAF=12409;SAP=26948.8;SAR=0;SRF=31576;SRP=68569.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:196:148,48:148:5199:48:1720:-92.1062,0,-408.087	0/1:724:429,295:429:15253:295:10563:-708.056,0,-1152.26	0/1:451:344,107:344:12184:107:3840:-200.178,0,-958.369	0/1:692:445,246:445:15769:246:8759:-558.831,0,-1210.32	0/1:353:236,117:236:8324:117:4200:-257.509,0,-642.563	0/1:327:227,100:227:8037:100:3575:-213.857,0,-624.67	0/1:707:602,105:602:21367:105:3756:-115.971,0,-1705.5	0/1:831:593,238:593:21040:238:8497:-497.089,0,-1641.78	0/1:477:358,119:358:12645:119:4272:-231.968,0,-992.388	0/1:460:369,91:369:13070:91:3272:-147.246,0,-1034.04	0/1:370:271,99:271:9595:99:3543:-196.129,0,-751.77	0/1:361:299,62:299:10577:62:2223:-86.2953,0,-839.411	0/1:247:187,60:187:6677:60:2141:-113.795,0,-526.347	0/1:352:304,48:304:10768:48:1728:-44.4118,0,-860.128	0/1:235:203,32:203:7252:32:1140:-28.9127,0,-580.768	0/0:188:172,16:172:6109:16:576:0,-5.52532,-498.59	0/1:353:219,134:219:7788:134:4812:-316.97,0,-594.578	0/1:237:172,65:172:6121:65:2336:-134.507,0,-479.326	0/1:197:150,47:150:5335:47:1692:-89.0093,0,-420.751	0/1:983:705,278:705:24821:278:9935:-573.315,0,-1931.61	0/1:791:486,305:486:17132:305:10865:-708.952,0,-1301.15	0/1:381:238,143:238:8447:143:5088:-328.572,0,-645.297	0/1:700:527,173:527:18685:173:6138:-321.244,0,-1465.33	0/1:652:454,198:454:16076:198:7085:-426.274,0,-1249.21	0/1:333:236,97:236:8338:97:3463:-202.485,0,-648.143	0/1:1659:942,717:942:33346:717:25659:-1729.87,0,-2497.56	0/1:1227:675,552:675:23818:552:19710:-1354.17,0,-1772.91	0/1:175:114,61:114:4054:61:2192:-138.177,0,-311.103	0/1:1865:1252,613:1252:44423:613:21847:-1339.32,0,-3431.82	0/1:608:474,133:474:16856:133:4756:-234.425,0,-1333.02	0/1:748:588,160:588:20757:160:5719:-276.942,0,-1640.73	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.2255	0/1:52:42,10:42:1482:10:360:-16.2409,0,-118.012	0/1:60:54,6:54:1896:6:216:-1.41501,0,-152.818	0/1:40:28,12:28:987:12:428:-26.0517,0,-77.0927	0/1:56:45,11:45:1608:11:392:-18.1738,0,-128.036	0/1:820:681,139:681:24040:139:4992:-188.289,0,-1914.33	0/1:753:590,162:590:20786:162:5778:-279.381,0,-1640.36	0/1:412:304,108:304:10789:108:3860:-213.541,0,-843.494	0/1:20:16,4:16:568:4:144:-7.0786,0,-45.2885	0/1:745:470,275:470:16599:275:9830:-634.115,0,-1265.48	0/1:118:97,21:97:3424:21:752:-31.0572,0,-272.83	0/1:776:623,152:623:22043:152:5409:-238.569,0,-1744.98	0/1:389:325,64:325:11610:64:2296:-84.0559,0,-923.776	0/1:260:212,48:212:7449:48:1707:-71.4016,0,-589.997	0/1:364:231,133:231:8207:133:4760:-305.006,0,-627.344	0/1:484:363,121:363:12863:121:4340:-233.919,0,-1010.56	0/1:757:647,110:647:22863:110:3936:-116.074,0,-1823.83	0/1:475:355,119:355:12580:119:4241:-226.733,0,-988.599	0/1:526:397,128:397:14092:128:4568:-239.853,0,-1109.48	0/1:603:474,129:474:16843:129:4605:-222.575,0,-1333.32	0/1:27:24,3:24:845:3:108:-1.73101,0,-68.2251	0/1:577:406,171:406:14463:171:6144:-365.8,0,-1127.33	0/1:387:275,112:275:9776:112:4020:-233.661,0,-759.876	0/0:52:48,4:48:1704:4:144:0,-2.5699,-140.553	0/1:643:522,120:522:18447:120:4265:-179.203,0,-1462.49	0/1:278:206,72:206:7267:72:2575:-142.189,0,-568.867	0/1:17:6,11:6:212:11:396:-29.8385,0,-14.3069	0/1:43:36,7:36:1260:7:252:-9.47298,0,-100.752	0/1:563:381,182:381:13490:182:6483:-398.022,0,-1043.34	0/1:549:327,222:327:11582:222:7944:-530.598,0,-876.743	0/1:25:20,5:20:716:5:180:-8.6338,0,-56.9695	0/1:808:499,309:499:17730:309:11047:-719.729,0,-1351.04	0/1:860:590,268:590:20977:268:9581:-574.67,0,-1628.2	0/1:399:321,78:321:11421:78:2766:-122.065,0,-905.406	0/1:342:249,93:249:8763:93:3286:-181.62,0,-685.602	0/1:700:471,227:471:16697:227:8093:-499.681,0,-1291.09	0/1:265:235,30:235:8353:30:1068:-13.1293,0,-670.418	0/1:206:168,38:168:5943:38:1360:-57.0746,0,-471.632	0/1:349:277,72:277:9836:72:2570:-122.344,0,-779.723	0/1:282:222,60:222:7883:60:2132:-100.875,0,-621.378	0/1:154:104,50:104:3719:50:1796:-109.771,0,-287.48	0/1:687:439,247:439:15564:247:8851:-570.934,0,-1193.06	0/1:112:86,26:86:3063:26:931:-47.9209,0,-242.089	0/1:1480:915,564:915:32348:564:20132:-1312.75,0,-2456.61	0/1:945:716,228:716:25351:228:8146:-431.802,0,-1993.41	0/1:816:618,198:618:21869:198:7059:-375.274,0,-1717.38	0/1:429:364,65:364:12955:65:2305:-75.1434,0,-1036.29	0/1:30:24,6:24:860:6:216:-10.2646,0,-68.6905	0/1:421:268,153:268:9507:153:5475:-349.314,0,-728.341	0/1:380:218,162:218:7728:162:5782:-393.997,0,-580.76	0/1:1008:862,146:862:30620:146:5231:-156.413,0,-2450.74	0/1:446:265,181:265:9419:181:6484:-433.18,0,-713.167	0/1:324:228,96:228:8094:96:3424:-203.267,0,-628.969	0/1:258:221,36:221:7718:36:1277:-34.0288,0,-614.603	0/1:711:543,168:543:19235:168:5975:-311.168,0,-1511.69	0/1:223:168,55:168:5977:55:1980:-107.395,0,-4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chr10	14188	.	G	A	31092.6	PASS	AB=0.27692;ABP=4370.47;AC=53;AF=0.281915;AN=188;AO=2805;CIGAR=1X;DP=18697;DPB=18697;DPRA=1.08415;EPP=6076.63;EPPR=34486;GTI=8;LEN=1;MEANALT=1.06667;MQM=59.9783;MQMR=59.9906;NS=94;NUMALT=1;ODDS=2.45661;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100296;QR=567066;RO=15888;RPL=0;RPP=6093.99;RPPR=34503.4;RPR=2805;RUN=1;SAF=2803;SAP=6076.63;SAR=2;SRF=15886;SRP=34486;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:49:32,17:32:1133:17:608:-40.3016,0,-87.5262	0/0:561:560,1:560:19988:1:36:0,-165.28,-1794.84	0/1:217:133,83:133:4737:83:2980:-203.05,0,-361.104	0/1:257:183,74:183:6496:74:2630:-159.58,0,-507.359	0/1:123:72,51:72:2569:51:1824:-127.414,0,-194.432	0/1:129:87,42:87:3108:42:1496:-96.1017,0,-241.115	0/1:495:405,90:405:14453:90:3221:-140.831,0,-1150.65	0/1:370:288,82:288:10224:82:2924:-152.012,0,-808.702	0/1:194:146,48:146:5164:48:1697:-94.6143,0,-406.501	0/1:263:203,60:203:7243:60:2133:-113.066,0,-572.75	0/1:113:72,41:72:2584:41:1476:-99.1198,0,-198.792	0/1:139:103,36:103:3685:36:1288:-74.3804,0,-290.008	0/0:165:165,0:165:5882:0:0:0,-49.6699,-529.49	0/0:131:131,0:131:4692:0:0:0,-39.4349,-422.44	0/0:143:143,0:143:5131:0:0:0,-43.0473,-461.93	0/0:127:127,0:127:4537:0:0:0,-38.2308,-408.496	0/1:162:130,32:130:4645:32:1152:-55.2187,0,-369.445	0/1:122:90,32:90:3224:32:1152:-67.2645,0,-253.656	0/1:93:61,32:61:2177:32:1152:-75.9944,0,-168.199	0/1:448:347,100:347:12384:100:3592:-188.565,0,-979.475	0/1:314:252,62:252:8982:62:2216:-105.181,0,-713.839	0/1:119:71,48:71:2533:48:1703:-117.733,0,-192.397	0/1:99:80,19:80:2861:19:675:-31.2756,0,-227.924	0/1:206:140,66:140:5012:66:2368:-151.366,0,-389.212	0/1:205:140,65:140:4997:65:2336:-148.788,0,-388.166	0/0:591:591,0:591:21048:0:0:0,-177.909,-1893.8	0/0:421:420,1:420:14971:1:36:0,-123.135,-1343.52	0/1:70:43,27:43:1539:27:957:-65.3718,0,-117.73	0/1:694:501,193:501:17879:193:6915:-413.499,0,-1399.77	0/0:420:420,0:420:15027:0:0:0,-126.433,-1352.15	0/0:170:170,0:170:6093:0:0:0,-51.1751,-548.469	0/0:18:18,0:18:625:0:0:0,-5.41854,-56.5725	0/1:31:20,11:20:720:11:396:-26.6508,0,-55.7968	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:438:438,0:438:15696:0:0:0,-131.851,-1412.33	0/1:298:201,97:201:7171:97:3452:-221.174,0,-555.737	0/0:123:123,0:123:4408:0:0:0,-37.0267,-396.892	0/1:11:9,2:9:320:2:68:-3.14638,0,-25.831	0/1:299:207,92:207:7428:92:3308:-207.93,0,-578.555	0/1:50:29,21:29:1044:21:752:-52.9548,0,-79.2233	0/1:397:283,113:283:10117:113:4041:-244.427,0,-791.014	0/1:124:85,38:85:3003:38:1356:-84.954,0,-233.112	0/0:134:134,0:134:4796:0:0:0,-40.338,-431.796	0/0:142:142,0:142:5021:0:0:0,-42.7463,-452.034	0/0:252:252,0:252:8993:0:0:0,-75.8596,-809.352	0/1:179:102,77:102:3649:77:2760:-194.757,0,-274.728	0/0:387:387,0:387:13767:0:0:0,-116.499,-1238.76	0/1:330:247,83:247:8864:83:2957:-167.023,0,-698.402	0/0:313:313,0:313:11201:0:0:0,-94.2224,-1007.98	0/1:18:13,5:13:468:5:180:-11.1335,0,-37.0411	0/1:287:200,87:200:7172:87:3124:-194.985,0,-559.139	0/1:106:83,23:83:2957:23:820:-42.2133,0,-234.408	0/1:42:34,8:34:1211:8:288:-13.6241,0,-96.6523	0/0:268:268,0:268:9555:0:0:0,-80.676,-859.906	0/1:37:20,17:20:720:17:593:-42.5566,0,-53.9907	0/1:14:12,2:12:413:2:72:-2.6223,0,-33.2834	0/1:49:25,24:25:900:24:845:-61.6166,0,-66.5705	0/0:127:127,0:127:4525:0:0:0,-38.2308,-407.418	0/1:206:149,57:149:5348:57:2018:-119.878,0,-419.439	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/1:218:149,69:149:5310:69:2453:-155.399,0,-412.409	0/0:362:362,0:362:12946:0:0:0,-108.973,-1164.95	0/0:226:226,0:226:8040:0:0:0,-68.0328,-723.619	0/0:149:149,0:149:5344:0:0:0,-44.8535,-481.092	0/1:297:233,64:233:8266:64:2304:-118.215,0,-654.525	0/0:169:168,1:168:5964:1:36:0,-47.2758,-533.267	0/1:88:69,19:69:2472:19:684:-35.3997,0,-196.243	0/0:233:232,1:232:8290:1:36:0,-66.5417,-742.509	0/0:139:139,0:139:4966:0:0:0,-41.8432,-447.085	0/0:44:44,0:44:1565:0:0:0,-13.2453,-141.14	0/1:361:298,63:298:10610:63:2241:-93.2802,0,-846.145	0/0:175:175,0:175:6264:0:0:0,-52.6802,-563.853	0/0:447:446,1:446:15873:1:36:0,-130.962,-1424.66	0/1:315:237,78:237:8448:78:2800:-157.415,0,-665.495	0/0:296:296,0:296:10540:0:0:0,-89.1049,-948.515	0/0:321:321,0:321:11482:0:0:0,-96.6306,-1033.25	0/1:24:18,6:18:648:6:216:-12.5658,0,-51.4272	0/1:152:91,61:91:3257:61:2177:-150.438,0,-247.592	0/0:142:141,1:141:5038:1:36:0,-39.148,-449.965	0/1:497:376,121:376:13385:121:4321:-239.453,0,-1054.83	0/0:169:169,0:169:6049:0:0:0,-50.8741,-544.512	0/1:97:66,31:66:2342:31:1116:-71.5518,0,-181.836	0/0:108:108,0:108:3849:0:0:0,-32.5112,-346.606	0/1:255:194,61:194:6881:61:2192:-120.783,0,-542.595	0/0:85:85,0:85:3041:0:0:0,-25.5875,-273.918	0/1:113:82,31:82:2935:31:1102:-65.4738,0,-230.367	0/0:135:135,0:135:4852:0:0:0,-40.639,-436.832	0/1:70:44,26:44:1567:26:936:-63.4589,0,-120.249	0/1:146:97,49:97:3480:49:1745:-113.382,0,-269.46	0/1:112:50,62:50:1784:62:2232:-167.428,0,-127.127	0/0:204:204,0:204:7271:0:0:0,-61.4101,-654.441	0/0:202:201,1:201:7209:1:36:0,-57.2098,-645.262
chr10	14244	.	C	A	107700	PASS	AB=0.41992;ABP=906.205;AC=93;AF=0.494681;AN=188;AO=6817;CIGAR=1X;DP=16253;DPB=16253;DPRA=34.9419;EPP=14797.3;EPPR=20447.4;GTI=7;LEN=1;MEANALT=1.05376;MQM=59.9532;MQMR=59.9926;NS=94;NUMALT=1;ODDS=4.75501;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243688;QR=336889;RO=9431;RPL=2;RPP=14788.6;RPPR=16222.3;RPR=6815;RUN=1;SAF=3;SAP=14779.9;SAR=6814;SRF=519;SRP=16222.3;SRR=8912;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:96:74,22:74:2647:22:784:-41.985,0,-209.577	0/1:208:99,109:99:3551:109:3914:-289.801,0,-257.183	0/1:281:192,89:192:6822:89:3196:-203.256,0,-529.462	0/1:264:188,76:188:6727:76:2720:-165.572,0,-526.033	0/1:132:80,52:80:2868:52:1856:-127.584,0,-218.621	0/1:49:32,17:32:1152:17:612:-40.663,0,-89.2397	0/1:238:104,134:104:3687:134:4807:-361.138,0,-260.388	0/1:215:106,109:106:3795:109:3881:-284.753,0,-277.026	0/1:197:103,94:103:3668:94:3345:-241.964,0,-271.022	0/1:169:102,67:102:3647:67:2401:-165.47,0,-277.56	0/1:117:80,37:80:2864:37:1320:-83.8814,0,-222.777	0/1:197:115,81:115:4092:81:2916:-203.308,0,-309.104	0/1:137:69,68:69:2468:68:2443:-178.884,0,-181.133	0/1:125:92,33:92:3281:33:1184:-69.2396,0,-257.88	0/1:136:69,67:69:2467:67:2386:-174.056,0,-181.343	0/1:132:65,67:65:2323:67:2396:-176.161,0,-169.594	0/1:126:68,58:68:2410:58:2088:-150.26,0,-179.224	0/1:70:39,31:39:1400:31:1110:-79.1388,0,-105.227	0/1:73:43,30:43:1501:30:1080:-75.5372,0,-113.406	0/1:382:189,193:189:6776:193:6871:-503.465,0,-494.918	0/1:271:156,115:156:5588:115:4116:-289.025,0,-421.463	0/1:209:168,41:168:5994:41:1464:-69.1401,0,-476.652	0/1:218:105,112:105:3738:112:4020:-296.451,0,-271.084	0/1:167:116,51:116:4094:51:1832:-114.889,0,-318.373	0/1:249:125,124:125:4442:124:4448:-325.515,0,-324.994	0/1:554:326,228:326:11674:228:8148:-566.562,0,-883.261	0/1:350:221,129:221:7914:129:4616:-310.174,0,-606.923	0/1:55:30,25:30:1067:25:885:-63.4099,0,-79.7846	0/1:637:354,283:354:12665:283:10133:-720.125,0,-947.915	0/1:294:144,150:144:5168:150:5361:-394.097,0,-376.756	0/1:192:128,63:128:4600:63:2264:-146.166,0,-356.306	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:20:10,10:10:351:10:360:-26.7237,0,-25.9061	0/1:15:13,2:13:468:2:72:-2.32127,0,-37.9442	0/1:440:265,175:265:9461:175:6244:-429.584,0,-718.999	0/1:146:105,41:105:3771:41:1464:-88.1057,0,-295.637	0/1:96:57,38:57:2018:38:1360:-93.743,0,-152.934	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	0/1:160:105,55:105:3754:55:1962:-128.69,0,-289.894	0/1:68:46,22:46:1631:22:792:-51.1356,0,-126.608	0/1:293:130,163:130:4663:163:5820:-435.712,0,-331.627	0/1:126:52,74:52:1830:74:2647:-200.546,0,-127.05	0/1:105:45,60:45:1607:60:2112:-158.738,0,-113.311	0/1:212:153,59:153:5464:59:2120:-127.25,0,-428.071	0/1:169:120,49:120:4273:49:1736:-105.648,0,-333.874	0/1:245:178,67:178:6357:67:2390:-141.592,0,-498.468	0/1:197:83,114:83:2945:114:4065:-306.733,0,-205.981	0/1:287:140,147:140:5008:147:5284:-389.297,0,-364.472	0/1:394:254,140:254:9047:140:5028:-334.059,0,-695.605	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/1:193:134,59:134:4808:59:2112:-132.25,0,-374.776	0/1:135:74,61:74:2644:61:2156:-153.666,0,-197.568	0/1:11:5,6:5:176:6:210:-15.9304,0,-12.8737	0/1:261:119,142:119:4244:142:5084:-379.1,0,-303.082	0/1:89:62,27:62:2204:27:966:-60.4655,0,-171.831	0/1:25:14,11:14:492:11:396:-28.457,0,-37.0866	0/0:26:25,1:25:900:1:36:0,-4.2285,-77.7227	0/1:172:107,65:107:3815:65:2324:-157.643,0,-291.768	0/1:179:129,50:129:4611:50:1791:-107.587,0,-361.27	0/1:19:4,15:4:144:15:540:-43.2146,0,-7.59405	0/1:274:193,81:193:6903:81:2904:-179.113,0,-538.855	0/1:326:191,135:191:6821:135:4836:-336.13,0,-515.825	0/1:125:59,66:59:2115:66:2344:-173.57,0,-152.989	0/1:211:116,95:116:4160:95:3403:-242.966,0,-311.065	0/1:273:140,133:140:5004:133:4771:-347.342,0,-368.324	0/1:120:104,16:104:3732:16:576:-16.0514,0,-299.956	0/1:67:34,32:34:1216:32:1124:-81.2377,0,-89.5188	0/1:127:69,58:69:2468:58:2050:-146.537,0,-184.143	0/1:112:86,26:86:3072:26:924:-49.7623,0,-242.994	0/1:58:31,27:31:1112:27:968:-69.9776,0,-82.9316	0/1:226:99,127:99:3532:127:4526:-339.474,0,-250.058	0/1:123:86,37:86:3092:37:1319:-81.9845,0,-241.48	0/1:316:142,174:142:5041:174:6200:-462.935,0,-358.711	0/1:311:148,163:148:5328:163:5832:-431.371,0,-386.03	0/1:326:177,149:177:6352:149:5295:-378.551,0,-473.633	0/1:154:71,83:71:2534:83:2968:-220.993,0,-181.952	0/1:11:7,4:7:248:4:140:-9.63325,0,-19.3529	0/1:194:136,58:136:4850:58:2084:-129.43,0,-378.252	0/1:171:129,42:129:4612:42:1489:-82.8264,0,-363.766	0/1:321:174,147:174:6221:147:5263:-377.174,0,-463.355	0/1:114:75,39:75:2680:39:1400:-91.9794,0,-207.128	0/1:117:64,53:64:2292:53:1891:-135.247,0,-171.321	0/1:87:49,38:49:1722:38:1356:-96.1509,0,-129.071	0/1:286:161,125:161:5717:125:4469:-316.282,0,-428.557	0/1:59:28,31:28:1004:31:1108:-82.2702,0,-72.9151	0/1:136:85,51:85:3026:51:1809:-122.15,0,-231.63	0/1:147:77,70:77:2755:70:2494:-180.461,0,-203.94	0/1:65:44,21:44:1584:21:747:-47.9874,0,-123.285	0/1:152:100,52:100:3583:52:1864:-122.283,0,-276.92	0/1:111:79,32:79:2832:32:1140:-69.4949,0,-221.704	0/1:250:119,131:119:4263:131:4704:-348.261,0,-308.59	0/1:218:120,98:120:4270:98:3486:-248.327,0,-318.855
chr10	16994	.	TC	TA,CA	337669	PASS	AB=0.730705,0.267861;ABP=3872.5,3920.74;AC=135,53;AF=0.718085,0.281915;AN=188;AO=13574,2250;CIGAR=1M1X,2X;DP=15847;DPB=15847.5;DPRA=0,1.10933;EPP=29478.6,4888.82;EPPR=9.52472;GTI=9;LEN=1,2;MEANALT=1.80851,2.2;MQM=59.2574,59.8311;MQMR=60;NS=94;NUMALT=2;ODDS=1.6221;PAIRED=0,0;PAIREDR=0;PAO=0,1;PQA=0,36;PQR=0;PRO=0;QA=486463,79857;QR=95;RO=3;RPL=13574,2250;RPP=29478.6,4888.82;RPPR=9.52472;RPR=0,0;RUN=1,1;SAF=0,0;SAP=29478.6,4888.82;SAR=13574,2250;SRF=0;SRP=9.52472;SRR=3;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:63:0,46,17:0:0:46,17:1648,599:-183.457,-49.1198,-35.2724,-134.691,0,-129.573	1/1:362:0,361,1:0:0:361,1:12948,25:-1164.35,-108.672,0,-1162.41,-106.473,-1162.11	1/2:166:0,112,54:0:0:112,54:4004,1925:-483.526,-157.27,-123.555,-326.613,0,-310.357	1/2:267:0,195,72:0:0:195,72:6979,2536:-775.737,-206.8,-148.099,-569.29,0,-547.616	1/2:83:0,67,16:0:0:67,16:2412,574:-243.968,-47.1778,-27.0088,-197.149,0,-192.333	1/2:72:0,54,18:0:0:54,18:1914,640:-208.363,-52.5097,-36.2541,-156.209,0,-150.79	1/2:116:0,101,15:0:0:101,15:3600,538:-337.674,-44.2403,-13.8363,-293.792,0,-289.276	1/2:317:0,232,84:0:0:232,84:8296,2942:-913.442,-239.352,-169.513,-674.082,0,-648.796	1/2:183:0,137,46:0:0:137,46:4924,1640:-535.161,-133.676,-92.4348,-401.482,0,-387.635	1/2:159:0,128,31:0:0:128,31:4592,1082:-462.849,-88.3536,-49.8218,-374.846,0,-365.514	1/2:117:0,75,42:0:0:75,42:2676,1495:-339.421,-122.2,-99.6232,-217.576,0,-204.933	1/2:180:0,139,41:0:0:139,41:4992,1461:-525.245,-119.443,-77.5997,-406.158,0,-393.816	1/1:151:1,150,0:1:36:150,0:5384,0:-479.262,-41.8573,0,-479.563,-45.1545,-482.5	1/1:116:0,116,0:0:0:116,0:4160,0:-372.976,-34.9195,0,-372.976,-34.9195,-372.976	1/1:143:0,143,0:0:0:143,0:5121,0:-460.984,-43.0473,0,-460.984,-43.0473,-460.984	1/1:119:0,119,0:0:0:119,0:4280,0:-385.321,-35.8226,0,-385.321,-35.8226,-385.321	1/2:131:0,97,34:0:0:97,34:3472,1218:-381.963,-99.692,-70.4921,-282.629,0,-272.394	1/2:111:0,89,22:0:0:89,22:3200,792:-325.716,-64.983,-38.1913,-261.093,0,-254.47	1/2:94:0,69,25:0:0:69,25:2484,900:-274.129,-73.7953,-53.0242,-200.693,0,-193.167	1/2:410:0,328,80:0:0:328,80:11771,2852:-1191.54,-232.475,-133.737,-959.062,0,-934.979	1/2:292:0,206,86:0:0:206,86:7372,3051:-849.587,-248.916,-186.904,-601.026,0,-575.137	1/2:136:0,69,67:0:0:69,67:2457,2379:-394.451,-194.198,-173.427,-200.608,0,-180.439	1/2:121:0,91,30:0:0:91,30:3272,1068:-354.135,-87.3926,-59.9989,-267.099,0,-258.068	1/2:119:0,87,32:0:0:87,32:3128,1141:-348.218,-93.3652,-67.1756,-255.209,0,-245.576	1/2:178:0,129,49:0:0:129,49:4636,1747:-520.628,-142.73,-103.897,-378.255,0,-363.504	1/1:717:0,714,0:0:0:714,0:25551,0:-2297.19,-214.935,0,-2297.19,-214.935,-2297.19	1/1:272:0,271,1:0:0:271,1:9717,36:-873.636,-81.5791,0,-870.698,-78.2819,-870.397	1/2:59:0,47,12:0:0:47,12:1680,432:-172.401,-35.6088,-21.4604,-137.151,0,-133.539	1/2:469:0,368,99:0:0:368,99:13200,3517:-1362.36,-286.565,-175.786,-1075.79,0,-1045.99	1/1:211:0,211,0:0:0:211,0:7572,0:-679.071,-63.5173,0,-679.071,-63.5173,-679.071	1/1:176:0,176,0:0:0:176,0:6311,0:-567.86,-52.9813,0,-567.86,-52.9813,-567.86	1/1:8:0,8,0:0:0:8,0:284,0:-25.8987,-2.40824,0,-25.8987,-2.40824,-25.8987	1/2:60:0,49,11:0:0:49,11:1756,396:-175.805,-32.6714,-17.9209,-143.493,0,-140.182	1/1:8:0,8,0:0:0:8,0:284,0:-25.7712,-2.40824,0,-25.7712,-2.40824,-25.7712	1/1:19:0,19,0:0:0:19,0:684,0:-61.873,-5.71957,0,-61.873,-5.71957,-61.873	1/1:39:0,39,0:0:0:39,0:1400,0:-126.114,-11.7402,0,-126.114,-11.7402,-126.114	1/1:506:1,502,1:1:25:502,1:18000,36:-1614.27,-149.196,0,-1611.64,-148.17,-1613.28	1/2:280:0,191,87:0:0:191,87:6840,3090:-807.967,-251.779,-194.282,-556.184,0,-529.994	1/1:138:0,138,0:0:0:138,0:4952,0:-445.683,-41.5421,0,-445.683,-41.5421,-445.683	1/2:17:0,15,2:0:0:15,2:540,70:-50.1107,-6.04527,-1.52982,-44.4165,0,-43.8144	1/2:119:0,94,25:0:0:94,25:3369,874:-345.174,-70.5899,-42.293,-274.933,0,-267.407	1/2:74:0,51,23:0:0:51,23:1836,801:-215.018,-65.4725,-50.12,-149.897,0,-142.974	1/2:246:0,181,65:0:0:181,65:6456,2334:-714.838,-190.753,-136.266,-524.444,0,-504.877	1/2:204:0,149,55:0:0:149,55:5332,1950:-593.426,-159.206,-114.353,-434.575,0,-418.018	1/1:151:0,151,0:0:0:151,0:5412,0:-487.044,-45.4555,0,-487.044,-45.4555,-487.044	1/1:100:0,100,0:0:0:100,0:3556,0:-320.034,-30.103,0,-320.034,-30.103,-320.034	1/1:174:0,174,0:0:0:174,0:6204,0:-557.977,-52.3792,0,-557.977,-52.3792,-557.977	1/2:130:0,92,37:0:0:92,37:3300,1291:-374.015,-104.989,-77.2945,-269.018,0,-257.88	1/1:213:0,212,1:0:0:212,1:7588,36:-682.217,-63.8184,0,-679.279,-60.5211,-678.978	1/2:294:0,222,72:0:0:222,72:7956,2574:-857.739,-210.123,-143.295,-647.973,0,-626.299	1/1:338:0,338,0:0:0:338,0:12100,0:-1088.47,-101.748,0,-1088.47,-101.748,-1088.47	1/2:23:0,19,4:0:0:19,4:680,144:-67.4987,-12.1095,-6.38993,-55.7486,0,-54.5445	1/2:181:0,128,53:0:0:128,53:4604,1835:-525.029,-149.466,-110.934,-375.913,0,-359.958	1/2:58:0,49,8:0:0:49,8:1748,284:-165.49,-23.1358,-8.38537,-142.35,0,-139.942	1/2:35:0,17,18:0:0:17,18:612,644:-102.252,-52.8723,-47.7548,-49.7365,0,-44.318	1/1:217:0,216,0:0:0:216,0:7748,0:-694.988,-65.0225,0,-694.988,-65.0225,-694.988	1/2:29:0,20,9:0:0:20,9:708,300:-82.2909,-24.6129,-18.5923,-58.0176,0,-55.3083	1/2:37:0,29,8:0:0:29,8:1036,280:-107.586,-23.1305,-14.4006,-84.8072,0,-82.399	1/2:53:0,37,16:0:0:37,16:1328,570:-155.14,-46.8163,-35.6782,-108.681,0,-103.864	1/1:101:0,101,0:0:0:101,0:3624,0:-326.302,-30.404,0,-326.302,-30.404,-326.302	1/2:212:0,140,72:0:0:140,72:5024,2588:-621.264,-211.494,-169.35,-410.128,0,-388.454	1/1:21:0,21,0:0:0:21,0:744,0:-67.2843,-6.32163,0,-67.2843,-6.32163,-67.2843	1/2:247:0,170,77:0:0:170,77:6096,2714:-717.5,-221.317,-170.142,-496.537,0,-473.357	1/1:349:0,347,2:0:0:347,2:12422,72:-1114.71,-104.457,0,-1108.83,-98.2227,-1108.23	1/1:135:0,135,0:0:0:135,0:4836,0:-435.033,-40.6391,0,-435.033,-40.6391,-435.033	1/1:157:0,157,0:0:0:157,0:5626,0:-506.224,-47.2617,0,-506.224,-47.2617,-506.224	1/2:415:0,323,92:0:0:323,92:11580,3255:-1209.21,-265.428,-168.195,-944.135,0,-916.44	1/1:113:0,113,0:0:0:113,0:4056,0:-365.042,-34.0164,0,-365.042,-34.0164,-365.042	1/2:65:0,45,20:0:0:45,20:1616,716:-190.568,-58.7473,-45.201,-132.179,0,-126.158	1/1:164:0,164,0:0:0:164,0:5878,0:-528.307,-49.3689,0,-528.307,-49.3689,-528.307	1/1:125:0,125,0:0:0:125,0:4472,0:-402.562,-37.6288,0,-402.562,-37.6288,-402.562	1/1:40:0,39,0:0:0:39,0:1396,0:-125.611,-11.7402,0,-125.611,-11.7402,-125.611	1/2:157:0,113,44:0:0:113,44:4044,1561:-456.311,-127.466,-93.4497,-329.2,0,-315.955	1/1:108:0,108,0:0:0:108,0:3853,0:-346.597,-32.5112,0,-346.597,-32.5112,-346.597	1/1:358:1,357,0:1:34:357,0:12784,0:-1144.97,-104.37,0,-1145.27,-107.468,-1148.03	1/2:228:0,170,58:0:0:170,58:6096,2078:-666.774,-169.831,-118.656,-497.301,0,-479.841	1/1:229:0,229,0:0:0:229,0:8216,0:-738.898,-68.9359,0,-738.898,-68.9359,-738.898	1/1:251:0,251,0:0:0:251,0:9005,0:-810.105,-75.5585,0,-810.105,-75.5585,-810.105	1/2:24:0,13,11:0:0:13,11:468,394:-70.6491,-32.4902,-28.5768,-38.5177,0,-35.2064	1/2:160:0,114,46:0:0:114,46:4104,1641:-468.545,-134.124,-99.8069,-334.778,0,-320.931	1/1:137:0,137,0:0:0:137,0:4909,0:-441.143,-41.2411,0,-441.143,-41.2411,-441.143	1/2:260:0,189,70:0:0:189,70:6780,2495:-756.395,-203.479,-146.585,-553.021,0,-531.949	1/1:163:0,162,1:0:0:162,1:5820,36:-523.457,-48.7669,0,-520.519,-45.4696,-520.218	1/2:124:0,97,27:0:0:97,27:3492,957:-363.232,-78.3166,-49.1167,-285.271,0,-277.143	1/1:173:0,173,0:0:0:173,0:6200,0:-556.865,-52.0782,0,-556.865,-52.0782,-556.865	1/2:298:0,220,76:0:0:220,76:7896,2695:-862.884,-219.554,-153.327,-643.326,0,-620.448	1/1:120:0,120,0:0:0:120,0:4304,0:-387.227,-36.1236,0,-387.227,-36.1236,-387.227	1/2:146:0,96,50:0:0:96,50:3436,1784:-425.615,-145.791,-116.892,-280.181,0,-265.129	1/1:176:0,176,0:0:0:176,0:6323,0:-568.871,-52.9813,0,-568.871,-52.9813,-568.871	1/2:72:0,46,26:0:0:46,26:1656,913:-209.775,-74.6572,-60.8098,-135.472,0,-127.645	1/2:164:0,122,42:0:0:122,42:4380,1499:-479.669,-122.48,-85.7542,-357.546,0,-344.903	1/2:115:0,49,66:0:0:49,66:1752,2324:-332.343,-189.539,-174.788,-143.159,0,-123.291	1/1:125:0,125,0:0:0:125,0:4453,0:-400.891,-37.6288,0,-400.891,-37.6288,-400.891	1/1:254:0,252,1:0:0:252,1:9056,36:-814.051,-75.8596,0,-811.113,-72.8822,-810.812
chr10	170750	.	GTT	GTC,ATC	187924	PASS	AB=0.476218,0.521655;ABP=28.418,24.0768;AC=135,53;AF=0.718085,0.281915;AN=188;AO=6177,2707;CIGAR=2M1X,1X1M1X;DP=8898;DPB=8898;DPRA=0,1.16627;EPP=13416.2,5881.19;EPPR=7.35324;GTI=0;LEN=1,3;MEANALT=1.75532,2.18644;MQM=59.6421,59.9217;MQMR=60;NS=94;NUMALT=2;ODDS=0.884882;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=220635,95654;QR=70;RO=2;RPL=6177,2707;RPP=13416.2,5881.19;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=0,0;SAP=13416.2,5881.19;SAR=6177,2707;SRF=0;SRP=7.35324;SRR=2;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:53:0,25,28:0:0:25,28:900,988:-154.243,-80.8041,-73.2784,-73.7953,0,-65.3664	1/1:148:0,148,0:0:0:148,0:5312,0:-478.143,-44.5524,0,-478.143,-44.5524,-478.143	1/2:132:0,72,60:0:0:72,60:2546,2110:-379.464,-172.107,-150.433,-207.709,0,-189.648	1/2:184:0,71,113:0:0:71,113:2522,3971:-528.981,-323.494,-302.12,-205.841,0,-171.824	1/2:72:0,28,44:0:0:28,44:996,1570:-209.516,-128.346,-119.917,-81.526,0,-68.2807	1/2:57:0,32,25:0:0:32,25:1129,886:-164.457,-72.5308,-62.8978,-92.2801,0,-84.7544	1/2:147:0,61,86:0:0:61,86:2150,3061:-423.847,-249.831,-231.468,-174.369,0,-148.48	1/2:149:0,68,81:0:0:68,81:2406,2852:-428.493,-232.531,-212.061,-196.314,0,-171.931	1/2:101:0,40,61:0:0:40,61:1402,2166:-290.92,-176.844,-164.803,-114.429,0,-96.0657	1/2:105:0,52,53:0:0:52,53:1864,1866:-304.276,-152.262,-136.609,-152.369,0,-136.414	1/2:47:0,23,24:0:0:23,24:813,837:-134.543,-68.3332,-61.4096,-66.5608,0,-59.3361	1/2:63:0,27,35:0:0:27,35:953,1241:-178.687,-101.098,-92.9702,-77.5832,0,-67.0471	1/1:67:1,66,0:1:36:66,0:2357,0:-208.776,-16.5707,0,-209.077,-19.868,-212.015	1/1:58:0,58,0:0:0:58,0:2073,0:-186.829,-17.4597,0,-186.829,-17.4597,-186.829	1/1:67:0,67,0:0:0:67,0:2412,0:-217.323,-20.169,0,-217.323,-20.169,-217.323	1/1:49:0,49,0:0:0:49,0:1749,0:-157.521,-14.7505,0,-157.521,-14.7505,-157.521	1/2:52:0,29,23:0:0:29,23:1040,815:-151.569,-66.7405,-58.0106,-85.1845,0,-78.2608	1/2:42:0,23,19:0:0:23,19:824,682:-123.188,-55.9899,-49.0662,-67.5563,0,-61.8367	1/2:35:0,16,19:0:0:16,19:576,666:-101.546,-54.5434,-49.7269,-47.3585,0,-41.6389	1/2:201:1,91,109:1:34:91,109:3238,3898:-578.494,-315.104,-290.468,-260.95,0,-230.895	1/2:141:0,61,80:0:0:61,80:2139,2834:-405.266,-231.217,-212.854,-174.401,0,-150.319	1/2:181:0,48,133:0:0:48,133:1713,4726:-525.075,-385.436,-370.986,-139.996,0,-99.9591	1/2:85:0,39,46:0:0:39,46:1400,1616:-246.077,-131.88,-120.14,-114.552,0,-100.705	1/2:140:0,62,78:0:0:62,78:2194,2746:-402.565,-223.873,-205.209,-179.045,0,-155.564	1/2:67:0,43,24:0:0:43,24:1544,857:-196.142,-70.2266,-57.2823,-126.273,0,-119.048	1/1:271:0,270,1:0:0:270,1:9629,36:-866.155,-81.2781,0,-863.218,-77.9809,-862.917	1/1:204:0,204,0:0:0:204,0:7289,0:-655.857,-61.4101,0,-655.857,-61.4101,-655.857	1/2:23:0,8,15:0:0:8,15:284,512:-65.0325,-41.8875,-39.4793,-23.4951,0,-18.9797	1/2:254:0,145,107:0:0:145,107:5197,3784:-732.053,-308.259,-264.61,-423.863,0,-391.652	1/1:177:0,177,0:0:0:177,0:6344,0:-571.032,-53.2823,0,-571.032,-53.2823,-571.032	1/1:77:0,77,0:0:0:77,0:2753,0:-247.982,-23.1793,0,-247.982,-23.1793,-247.982	1/1:12:0,12,0:0:0:12,0:428,0:-38.8542,-3.61236,0,-38.8542,-3.61236,-38.8542	1/2:25:0,12,13:0:0:12,13:428,466:-73.2418,-38.3653,-34.7529,-35.2338,0,-31.3204	1/1:4:0,4,0:0:0:4,0:144,0:-13.3068,-1.20412,0,-13.3068,-1.20412,-13.3068	1/1:15:0,15,0:0:0:15,0:536,0:-48.5715,-4.51545,0,-48.5715,-4.51545,-48.5715	1/1:13:0,13,0:0:0:13,0:468,0:-42.4596,-3.91339,0,-42.4596,-3.91339,-42.4596	1/1:176:0,175,0:0:0:175,0:6280,0:-564.85,-52.6803,0,-564.85,-52.6803,-564.85	1/2:213:0,103,110:0:0:103,110:3694,3908:-619.956,-318.802,-287.796,-301.511,0,-268.398	1/1:56:0,56,0:0:0:56,0:2012,0:-181.343,-16.8577,0,-181.343,-16.8577,-181.343	1/2:5:0,2,3:0:0:2,3:72,106:-14.8635,-8.98601,-8.38395,-6.23466,0,-5.33157	1/2:164:0,75,88:0:0:75,88:2680,3081:-469.08,-250.667,-228.09,-218.407,0,-191.916	1/2:44:0,22,22:0:0:22,22:788,792:-129.243,-64.983,-58.3604,-64.6188,0,-57.9961	1/2:129:0,65,64:0:0:65,64:2302,2254:-370.661,-183.854,-164.287,-187.159,0,-167.893	1/2:48:0,24,24:0:0:24,24:860,862:-140.814,-70.6776,-63.4529,-70.4946,0,-63.2699	1/1:69:0,69,0:0:0:69,0:2454,0:-221.099,-20.7711,0,-221.099,-20.7711,-221.099	1/1:70:0,70,0:0:0:70,0:2497,0:-224.948,-21.0721,0,-224.948,-21.0721,-224.948	1/1:119:0,119,0:0:0:119,0:4231,0:-380.949,-35.8226,0,-380.949,-35.8226,-380.949	1/2:216:0,104,112:0:0:104,112:3696,3934:-621.655,-320.537,-289.23,-301.471,0,-267.755	1/1:92:0,92,0:0:0:92,0:3274,0:-294.852,-27.6948,0,-294.852,-27.6948,-294.852	1/2:119:0,58,61:0:0:58,61:2080,2139:-344.045,-174.413,-156.954,-169.986,0,-151.623	1/1:161:0,161,0:0:0:161,0:5742,0:-516.841,-48.4658,0,-516.841,-48.4658,-516.841	1/2:5:0,3,2:0:0:3,2:108,72:-15.0469,-6.23466,-5.33157,-9.17208,0,-8.57002	1/2:117:0,65,52:0:0:65,52:2336,1824:-339.359,-148.785,-129.218,-190.929,0,-175.275	1/2:28:0,18,10:0:0:18,10:636,350:-80.605,-28.8261,-23.4076,-52.1298,0,-49.1195	1/2:8:0,4,4:0:0:4,4:144,144:-23.8592,-12.1095,-10.9054,-12.1095,0,-10.9054	1/1:95:0,95,0:0:0:95,0:3378,0:-304.228,-28.5979,0,-304.228,-28.597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chr10	387030	.	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chr10	441769	.	G	T	215506	PASS	AB=0.555712;ABP=213.993;AC=135;AF=0.718085;AN=188;AO=10375;CIGAR=1X;DP=13860;DPB=13860;DPRA=0;EPP=22532;EPPR=7507.74;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9578;MQMR=59.9963;NS=94;NUMALT=1;ODDS=1.92268;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=370763;QR=124256;RO=3484;RPL=0;RPP=22532;RPPR=7507.74;RPR=10375;RUN=1;SAF=10375;SAP=22532;SAR=0;SRF=3484;SRP=7568.42;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:72:29,43:29:1017:43:1544:-117.579,0,-70.1657	1/1:218:1,217:1:36:217:7754:-694.291,-62.0263,0	0/1:192:75,117:75:2655:117:4173:-317.954,0,-181.387	0/1:345:141,204:141:5040:204:7290:-552.296,0,-349.891	0/1:159:81,78:81:2866:78:2770:-201.677,0,-210.312	0/1:91:51,40:51:1798:40:1425:-101.153,0,-134.704	0/1:236:88,148:88:3126:148:5285:-404.742,0,-210.521	0/1:240:103,137:103:3643:137:4903:-369.152,0,-255.826	0/1:161:76,85:76:2720:85:3031:-224.554,0,-196.578	0/1:158:59,99:59:2116:99:3544:-271.606,0,-143.146	0/1:57:28,29:28:1008:29:1036:-76.3952,0,-73.8776	0/1:67:26,41:26:921:41:1464:-111.887,0,-63.0362	1/1:72:0,72:0:0:72:2575:-231.999,-21.6742,0	1/1:78:0,78:0:0:78:2779:-250.351,-23.4803,0	1/1:79:0,79:0:0:79:2829:-254.848,-23.7814,0	1/1:49:0,49:0:0:49:1743:-157.154,-14.7505,0	0/1:72:26,46:26:932:46:1652:-127.294,0,-62.5247	0/1:49:25,24:25:900:24:864:-63.3321,0,-66.5705	0/1:40:24,16:24:860:16:576:-40.1338,0,-65.6806	0/1:308:112,196:112:3986:196:7003:-537.617,0,-266.211	0/1:224:100,124:100:3554:124:4428:-331.262,0,-252.636	0/1:181:106,75:106:3753:75:2670:-186.059,0,-283.483	0/1:105:51,54:51:1824:54:1936:-142.908,0,-132.833	0/1:192:77,115:77:2726:115:4116:-312.809,0,-187.783	0/1:128:71,57:71:2533:57:2018:-143.23,0,-189.688	1/1:512:1,511:1:36:511:18289:-1641.99,-150.529,0	1/1:336:0,336:0:0:336:12002:-1080.03,-101.146,0	0/1:22:12,10:12:432:10:360:-26.1216,0,-32.5985	0/1:440:242,198:242:8661:198:7089:-505.615,0,-647.029	1/1:182:0,182:0:0:182:6504:-585.439,-54.7875,0	1/1:161:0,161:0:0:161:5747:-517.339,-48.4658,0	1/1:40:0,40:0:0:40:1440:-129.898,-12.0412,0	0/1:57:28,29:28:993:29:1044:-77.1161,0,-72.5238	1/1:16:0,16:0:0:16:563:-50.9992,-4.81648,0	1/1:27:0,27:0:0:27:963:-86.9859,-8.12781,0	1/1:28:0,28:0:0:28:1008:-91.0364,-8.42884,0	1/1:194:0,194:0:0:194:6944:-625.021,-58.3998,0	0/1:332:143,189:143:5093:189:6776:-509.969,0,-358.573	1/1:69:0,69:0:0:69:2480:-223.453,-20.7711,0	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:172:71,101:71:2548:101:3606:-272.967,0,-177.793	0/1:47:20,27:20:720:27:963:-72.8375,0,-50.9804	0/1:187:61,126:61:2169:126:4501:-348.904,0,-139.182	0/1:81:38,43:38:1360:43:1548:-115.23,0,-98.3172	1/1:71:0,71:0:0:71:2535:-228.398,-21.3731,0	1/1:209:0,209:0:0:209:7470:-672.345,-62.9153,0	1/1:246:0,246:0:0:246:8793:-791.356,-74.0534,0	0/1:270:103,167:103:3676:167:5984:-457.385,0,-249.766	1/1:209:0,209:0:0:209:7466:-671.985,-62.9153,0	0/1:231:105,126:105:3776:126:4491:-334.817,0,-270.499	1/1:338:0,338:0:0:338:12081:-1087.14,-101.748,0	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/1:215:95,120:95:3412:120:4280:-320.648,0,-242.572	0/1:64:34,30:34:1205:30:1076:-77.8869,0,-89.488	0/1:30:13,17:13:468:17:612:-46.3825,0,-33.4287	1/1:207:0,206:0:0:206:7374:-663.487,-62.0122,0	0/1:75:32,43:32:1148:43:1535:-115.865,0,-81.0526	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/1:34:10,24:10:360:24:852:-66.7654,0,-22.5093	1/1:112:0,112:0:0:112:3996:-359.828,-33.7154,0	0/1:125:52,73:52:1864:73:2602:-196.8,0,-130.411	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:292:133,159:133:4754:159:5690:-424.311,0,-340.114	1/1:338:3,335:3:108:335:11950:-1065.25,-91.673,0	1/1:77:0,77:0:0:77:2721:-245.126,-23.1793,0	1/1:131:0,131:0:0:131:4692:-422.44,-39.4349,0	0/1:306:108,198:108:3857:198:7072:-544.422,0,-255.209	1/1:133:0,133:0:0:133:4776:-429.982,-40.037,0	0/1:25:12,13:12:432:13:455:-33.7562,0,-31.6954	1/1:129:0,129:0:0:129:4601:-414.025,-38.8329,0	1/1:76:0,76:0:0:76:2716:-244.617,-22.8783,0	1/1:44:0,44:0:0:44:1572:-141.772,-13.2453,0	0/1:219:108,111:108:3857:111:3947:-289.495,0,-281.399	1/1:107:1,106:1:36:106:3804:-338.959,-28.6119,0	1/1:274:0,274:0:0:274:9787:-880.774,-82.4822,0	0/1:294:139,155:139:4959:155:5549:-411.03,0,-357.952	1/1:182:0,182:0:0:182:6503:-585.355,-54.7875,0	1/1:184:1,183:1:36:183:6526:-583.718,-51.7912,0	0/1:20:8,12:8:284:12:424:-32.4758,0,-19.8828	0/1:177:71,106:71:2547:106:3754:-284.771,0,-176.197	1/1:215:0,215:0:0:215:7696:-692.673,-64.7215,0	0/1:465:213,252:213:7527:252:9023:-672.061,0,-537.493	1/1:122:0,122:0:0:122:4351:-391.766,-36.7257,0	0/1:56:31,25:31:1112:25:892:-63.742,0,-83.5337	1/1:91:0,91:0:0:91:3262:-293.799,-27.3937,0	0/1:141:62,79:62:2212:79:2828:-212.314,0,-156.9	1/1:60:0,60:0:0:60:2151:-193.857,-18.0618,0	0/1:89:37,52:37:1324:52:1854:-140.347,0,-92.6704	1/1:88:0,88:0:0:88:3142:-283.005,-26.4906,0	0/1:69:32,37:32:1152:37:1328:-99.0512,0,-83.2191	0/1:100:43,57:43:1536:57:2035:-153.319,0,-108.43	0/1:80:54,26:54:1940:26:923:-59.3044,0,-150.794	1/1:216:0,216:0:0:216:7686:-691.646,-65.0225,0	1/1:96:0,96:0:0:96:3447:-310.441,-28.8989,0
chr10	684907	.	G	T	113824	PASS	AB=0.517445;ABP=14.2229;AC=135;AF=0.718085;AN=188;AO=5541;CIGAR=1X;DP=7600;DPB=7600;DPRA=16.3333;EPP=12035.1;EPPR=4461.05;GTI=1;LEN=1;MEANALT=1.02151;MQM=56.2678;MQMR=59.9601;NS=94;NUMALT=1;ODDS=2.6744;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=197534;QR=73469;RO=2057;RPL=0;RPP=12035.1;RPPR=4469.73;RPR=5541;RUN=1;SAF=5541;SAP=12035.1;SAR=0;SRF=2056;SRP=4461.05;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:25:5,20:5:176:20:708:-55.7948,0,-8.65927	1/1:81:0,81:0:0:81:2904:-261.429,-24.3834,0	0/1:129:61,68:61:2177:68:2408:-178.017,0,-157.361	0/1:168:82,86:82:2914:86:3048:-223.701,0,-211.92	0/1:53:20,33:20:705:33:1168:-89.2889,0,-47.8182	0/1:23:6,17:6:216:17:600:-47.0069,0,-12.8668	0/1:41:17,24:17:612:24:855:-64.7918,0,-43.0689	0/1:58:22,36:22:792:36:1288:-98.5959,0,-54.1459	0/1:83:42,41:42:1500:41:1440:-104.853,0,-110.309	0/1:53:30,23:30:1080:23:809:-57.0402,0,-81.5587	0/1:73:36,37:36:1296:37:1320:-96.751,0,-94.9687	0/1:99:41,58:41:1468:58:2075:-157.071,0,-102.613	1/1:68:0,68:0:0:68:2412:-216.85,-20.47,0	1/1:85:0,85:0:0:85:3044:-273.596,-25.5876,0	1/1:66:0,66:0:0:66:2348:-211.205,-19.868,0	1/1:88:0,88:0:0:88:3158:-283.896,-26.4906,0	0/1:47:21,26:21:741:26:924:-69.3093,0,-52.8632	0/1:32:16,16:16:576:16:576:-42.4454,0,-42.542	0/1:33:19,14:19:665:14:496:-35.0123,0,-50.2388	0/1:115:49,66:49:1760:66:2337:-175.263,0,-124.063	0/1:158:86,72:86:3069:72:2568:-183.538,0,-228.873	0/1:63:47,16:47:1661:16:563:-31.9462,0,-130.809	0/1:135:44,91:44:1576:91:3248:-251.388,0,-101.493	0/1:60:33,27:33:1161:27:968:-68.6415,0,-86.7329	0/1:60:21,39:21:748:39:1353:-103.929,0,-49.5835	1/1:262:0,262:0:0:262:9384:-842.452,-78.8699,0	1/1:182:0,182:0:0:182:6452:-579.221,-54.7875,0	0/1:24:12,12:12:432:12:432:-31.9776,0,-31.9965	0/1:377:266,111:266:9522:111:3964:-243.102,0,-743.443	1/1:131:0,131:0:0:131:4704:-422.089,-39.4349,0	1/1:110:0,110:0:0:110:3911:-351.682,-33.1133,0	1/1:7:0,7:0:0:7:252:-23.0104,-2.10721,0	0/1:12:6,6:6:216:6:216:-16.1687,0,-16.1782	1/1:6:0,6:0:0:6:212:-19.341,-1.80618,0	1/1:7:0,7:0:0:7:252:-23.0235,-2.10721,0	1/1:13:0,13:0:0:13:464:-42.0867,-3.91339,0	1/1:148:1,147:1:27:147:5272:-471.516,-41.8527,0	0/1:136:57,79:57:2032:79:2832:-213.832,0,-142.211	1/1:64:0,64:0:0:64:2284:-205.342,-19.2659,0	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:116:56,60:56:2004:60:2144:-158.118,0,-145.714	0/1:38:20,18:20:716:18:640:-46.4624,0,-53.327	0/1:169:70,99:70:2497:99:3540:-267.658,0,-174.103	0/1:63:25,38:25:877:38:1368:-103.646,0,-60.2803	1/1:43:0,43:0:0:43:1540:-137.281,-12.9443,0	1/1:56:0,56:0:0:56:1958:-176.395,-16.8577,0	1/1:59:0,59:0:0:59:2100:-189.081,-17.7608,0	0/1:150:70,80:70:2497:80:2860:-211.769,0,-179.827	1/1:51:0,50:0:0:50:1776:-159.573,-15.0515,0	0/1:116:57,59:57:2033:59:2096:-153.863,0,-148.321	1/1:73:0,73:0:0:73:2573:-231.59,-21.9752,0	0/1:5:3,2:3:108:2:72:-5.32664,0,-8.57002	0/1:80:32,48:32:1140:48:1704:-129.357,0,-78.8268	0/1:94:44,50:44:1576:50:1780:-131.651,0,-113.835	0/1:8:2,6:2:72:6:216:-17.3777,0,-4.42848	1/1:83:0,83:0:0:83:2964:-266.807,-24.9855,0	0/1:43:18,25:18:633:25:892:-67.518,0,-44.3484	0/1:11:8,3:8:288:3:108:-6.76102,0,-22.9561	0/1:12:7,5:7:252:5:180:-12.9336,0,-19.4166	1/1:99:0,99:0:0:99:3520:-315.856,-29.802,0	0/1:114:62,52:62:2224:52:1868:-133.797,0,-166.107	1/1:7:0,7:0:0:7:248:-22.6493,-2.10721,0	0/1:183:81,101:81:2912:101:3600:-267.637,0,-207.315	1/1:127:1,126:1:36:126:4509:-401.536,-34.6325,0	1/1:29:0,29:0:0:29:1028:-92.6618,-8.72987,0	1/1:69:0,69:0:0:69:2444:-220.046,-20.7711,0	0/1:186:61,125:61:2188:125:4464:-344.396,0,-141.194	1/1:177:2,175:2:72:175:6268:-556,-46.4456,0	0/1:44:27,17:27:968:17:612:-42.0077,0,-74.192	1/1:38:0,38:0:0:38:1360:-122.089,-11.4391,0	1/1:36:0,36:0:0:36:1296:-116.911,-10.8371,0	1/1:16:0,16:0:0:16:576:-51.9688,-4.81648,0	0/1:41:11,30:11:392:30:1072:-84.3217,0,-23.2778	1/1:68:0,68:0:0:68:2416:-217.38,-20.47,0	1/1:236:1,235:1:36:235:8405:-750.58,-67.4448,0	1/1:131:0,131:0:0:131:4596:-412.822,-39.4349,0	1/1:143:0,143:0:0:143:5104:-458.496,-43.0473,0	1/1:62:0,62:0:0:62:2205:-198.579,-18.6639,0	0/1:8:5,3:5:180:3:108:-7.66558,0,-14.1438	0/1:79:47,32:47:1688:32:1152:-80.0205,0,-128.426	1/1:77:0,77:0:0:77:2748:-246.51,-23.1793,0	0/1:100:20,80:20:705:80:2821:-223.669,0,-33.6698	1/1:72:0,72:0:0:72:2568:-230.197,-21.6742,0	0/1:71:33,38:33:1176:38:1364:-101.517,0,-84.7746	1/1:32:0,32:0:0:32:1148:-102.934,-9.63296,0	0/1:109:59,50:59:2112:50:1784:-127.703,0,-157.537	1/1:21:0,21:0:0:21:752:-67.9616,-6.32163,0	0/1:81:40,41:40:1417:41:1472:-108.357,0,-103.442	1/1:78:0,78:0:0:78:2780:-250.073,-23.4803,0	0/1:62:39,23:39:1400:23:804:-53.9111,0,-107.635	0/1:159:77,82:77:2748:82:2932:-215.921,0,-199.67	0/1:43:33,10:33:1184:10:356:-19.4171,0,-93.924	1/1:79:0,79:0:0:79:2818:-252.878,-23.7814,0	1/1:73:1,72:1:36:72:2576:-228.169,-18.3769,0
chr10	684924	.	TCTGATT	TCTGGTC,TCTGGTT	159797	PASS	AB=0.519435,0.473263;ABP=16.9369,29.3693;AC=135,53;AF=0.718085,0.281915;AN=188;AO=5556,2022;CIGAR=4M1X1M1X,4M1X2M;DP=7648;DPB=7647.86;DPRA=16.4366,1.18249;EPP=11989.7,4298.7;EPPR=5.18177;GTI=1;LEN=7,1;MEANALT=2.25806,2.52542;MQM=56.351,59.9817;MQMR=60;NS=94;NUMALT=2;ODDS=1.89856;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=195321,72444;QR=35;RO=1;RPL=9,11;RPP=11989.7,4298.7;RPPR=5.18177;RPR=5547,2011;RUN=1,1;SAF=5556,2022;SAP=12067.7,4393.73;SAR=0,0;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:26:0,20,6:0:0:20,6:673,216:-72.3301,-17.9843,-11.9637,-54.7,0,-52.8938	1/1:82:0,81,1:0:0:81,1:2837,36:-255.051,-24.3834,0,-252.114,-21.0862,-251.813	1/2:131:0,70,61:0:0:70,61:2433,2196:-377.214,-179.541,-158.469,-198.027,0,-179.664	1/2:166:0,84,81:0:0:84,81:2955,2912:-477.841,-237.571,-212.285,-240.266,0,-215.882	1/2:55:0,34,21:0:0:34,21:1170,752:-155.557,-61.6846,-51.4496,-94.224,0,-87.9024	1/2:24:0,18,6:0:0:18,6:618,216:-67.7973,-17.9843,-12.5658,-50.1681,0,-48.3619	1/2:41:0,24,16:0:0:24,16:862,576:-117.177,-46.9989,-39.7742,-70.1778,0,-65.3614	1/2:58:0,35,22:0:0:35,22:1212,792:-163.089,-64.6306,-54.0945,-98.4609,0,-91.8383	1/2:82:0,42,40:0:0:42,40:1496,1432:-238.901,-117.136,-104.493,-122.122,0,-110.08	1/2:54:0,22,32:0:0:22,32:780,1148:-157.44,-93.9969,-87.3742,-63.7985,0,-54.1655	1/2:72:0,36,35:0:0:36,35:1279,1260:-206.776,-102.844,-92.0065,-103.964,0,-93.4275	1/2:97:0,57,40:0:0:57,40:2040,1436:-283.786,-117.495,-100.336,-166.65,0,-154.609	1/1:68:0,66,0:0:0:66,0:2346,0:-210.648,-19.868,0,-210.648,-19.868,-210.648	1/1:85:0,84,0:0:0:84,0:2977,0:-267.412,-25.2865,0,-267.412,-25.2865,-267.412	1/1:67:0,67,0:0:0:67,0:2345,0:-210.662,-20.169,0,-210.662,-20.169,-210.662	1/1:90:0,89,0:0:0:89,0:3152,0:-283.095,-26.7917,0,-283.095,-26.7917,-283.095	1/2:48:0,26,22:0:0:26,22:917,792:-139.627,-64.983,-57.1562,-75.0008,0,-68.3781	1/2:34:0,17,16:0:0:17,16:588,576:-94.7931,-47.1021,-41.9845,-47.785,0,-42.9685	1/2:32:0,14,18:0:0:14,18:490,648:-93.0783,-53.2333,-49.0189,-40.1991,0,-34.7806	1/2:116:0,68,48:0:0:68,48:2417,1724:-337.432,-140.994,-120.524,-196.796,0,-182.346	1/2:158:0,71,85:0:0:71,85:2516,3044:-452.964,-248.306,-226.933,-204.717,0,-179.13	1/2:62:0,17,44:0:0:17,44:593,1576:-176.58,-128.48,-123.363,-48.101,0,-34.8557	1/2:134:0,90,43:0:0:90,43:3189,1525:-383.609,-124.246,-97.1537,-259.366,0,-246.422	1/2:60:0,26,33:0:0:26,33:910,1188:-170.959,-97.0023,-89.1755,-74.0178,0,-64.0838	1/2:57:0,39,17:0:0:39,17:1366,605:-160.456,-49.4261,-37.6859,-111.146,0,-106.029	1/1:265:0,263,0:0:0:263,0:9134,0:-820.408,-79.1709,0,-820.408,-79.1709,-820.408	1/1:183:0,182,0:0:0:182,0:6420,0:-576.445,-54.7875,0,-576.445,-54.7875,-576.445	1/2:24:0,12,11:0:0:12,11:427,396:-67.1028,-32.3207,-28.7084,-34.7891,0,-31.4777	1/2:380:0,110,263:0:0:110,263:3890,9427:-1085.38,-768.903,-735.79,-316.518,0,-237.348	1/1:132:0,132,0:0:0:132,0:4638,0:-416.793,-39.736,0,-416.793,-39.736,-416.793	1/1:113:0,113,0:0:0:113,0:4019,0:-361.428,-34.0164,0,-361.428,-34.0164,-361.428	1/1:7:0,7,0:0:0:7,0:252,0:-23.0104,-2.10721,0,-23.0104,-2.10721,-23.0104	1/2:13:0,6,7:0:0:6,7:216,239:-37.3593,-19.7355,-17.9293,-17.9749,0,-15.8677	1/1:6:0,6,0:0:0:6,0:214,0:-19.5108,-1.80618,0,-19.5108,-1.80618,-19.5108	1/1:7:0,7,0:0:0:7,0:252,0:-23.0235,-2.10721,0,-23.0235,-2.10721,-23.0235	1/1:13:0,13,0:0:0:13,0:458,0:-41.5436,-3.91339,0,-41.5436,-3.91339,-41.5436	1/1:151:1,150,0:1:35:150,0:5336,0:-476.489,-41.9569,0,-476.79,-45.1545,-479.637	1/2:133:0,79,52:0:0:79,52:2753,1872:-376.494,-152.871,-129.089,-223.742,0,-208.089	1/1:67:0,66,1:0:0:66,1:2341,36:-210.133,-19.868,0,-207.195,-16.5707,-206.894	2/2:5:0,0,5:0:0:0,5:0,180:-16.5521,-16.5521,-16.5521,-1.50515,-1.50515,0	1/2:114:0,60,54:0:0:60,54:2110,1928:-329.13,-157.541,-139.479,-171.943,0,-155.687	1/2:38:0,18,20:0:0:18,20:643,716:-111.143,-58.7456,-53.327,-52.7545,0,-46.7339	1/2:169:0,101,68:0:0:101,68:3517,2421:-483.393,-197.67,-167.266,-286.076,0,-265.606	1/2:63:0,38,25:0:0:38,25:1366,896:-184.07,-73.4346,-61.9955,-110.993,0,-103.467	1/1:43:0,43,0:0:0:43,0:1507,0:-135.107,-12.9443,0,-135.107,-12.9443,-135.107	1/1:56:0,56,0:0:0:56,0:1964,0:-176.924,-16.8577,0,-176.924,-16.8577,-176.924	1/1:60:0,58,0:0:0:58,0:2062,0:-185.495,-17.4597,0,-185.495,-17.4597,-185.495	1/2:146:0,80,64:0:0:80,64:2797,2296:-414.465,-187.348,-163.266,-227.183,0,-207.917	1/1:50:0,50,0:0:0:50,0:1776,0:-159.956,-15.0515,0,-159.956,-15.0515,-159.956	1/2:117:0,60,57:0:0:60,57:2098,2035:-336.812,-166.263,-148.201,-170.903,0,-153.744	1/1:74:0,74,0:0:0:74,0:2591,0:-233.209,-22.2762,0,-233.209,-22.2762,-233.209	1/2:5:0,2,3:0:0:2,3:72,108:-15.0421,-9.17208,-8.57002,-6.22973,0,-5.32664	1/2:79:0,48,31:0:0:48,31:1687,1116:-228.48,-91.4198,-76.9703,-137.416,0,-128.084	1/2:98:0,53,45:0:0:53,45:1877,1597:-282.83,-130.472,-114.517,-152.712,0,-139.165	1/2:8:0,6,2:0:0:6,2:216,72:-23.8546,-6.23466,-4.42848,-17.9797,0,-17.3777	1/1:84:0,84,0:0:0:84,0:2953,0:-265.879,-25.2865,0,-265.879,-25.2865,-265.879	1/2:43:0,25,17:0:0:25,17:874,612:-121.041,-50.0776,-42.5519,-71.0989,0,-65.9814	1/2:11:0,3,8:0:0:3,8:100,288:-31.9435,-23.8592,-22.9561,-8.42474,0,-6.0165	1/2:12:0,5,7:0:0:5,7:180,248:-35.2404,-20.557,-19.0518,-15.0408,0,-12.9336	1/1:99:0,98,0:0:0:98,0:3417,0:-306.942,-29.5009,0,-306.942,-29.5009,-306.942	1/2:111:0,52,59:0:0:52,59:1853,2111:-323.256,-172.498,-156.844,-151.115,0,-133.354	1/1:7:0,7,0:0:0:7,0:249,0:-22.7404,-2.10721,0,-22.7404,-2.10721,-22.7404	1/2:183:0,100,82:0:0:100,82:3525,2936:-524.895,-239.436,-209.333,-285.46,0,-260.775	1/1:128:0,127,1:0:0:127,1:4445,36:-399.085,-38.2308,0,-396.147,-34.9336,-395.846	1/1:29:0,27,0:0:0:27,0:935,0:-84.0767,-8.12781,0,-84.0767,-8.12781,-84.0767	1/1:70:0,69,1:0:0:69,1:2397,36:-215.493,-20.7711,0,-212.555,-17.4738,-212.254	1/2:189:0,126,62:0:0:126,62:4430,2224:-541.1,-181.41,-143.48,-359.695,0,-341.032	1/1:177:0,175,2:0:0:175,2:6081,72:-545.984,-52.6803,0,-540.109,-46.4456,-539.507	1/2:44:0,17,27:0:0:17,27:606,972:-128.908,-79.6701,-74.5526,-49.5952,0,-41.4674	1/1:39:0,39,0:0:0:39,0:1374,0:-123.592,-11.7402,0,-123.592,-11.7402,-123.592	1/1:36:0,36,0:0:0:36,0:1275,0:-115.022,-10.8371,0,-115.022,-10.8371,-115.022	1/1:16:0,15,0:0:0:15,0:540,0:-48.4661,-4.51545,0,-48.4661,-4.51545,-48.4661	1/2:41:0,30,11:0:0:30,11:1063,381:-117.783,-31.3093,-22.2784,-86.822,0,-83.5107	1/1:73:0,71,0:0:0:71,0:2454,0:-220.648,-21.3731,0,-220.648,-21.3731,-220.648	1/1:245:0,239,1:0:0:239,1:8399,36:-753.98,-71.9462,0,-751.042,-69.0021,-750.741	1/1:135:0,132,0:0:0:132,0:4601,0:-412.971,-39.736,0,-412.971,-39.736,-412.971	1/1:144:0,142,0:0:0:142,0:4923,0:-442.253,-42.7463,0,-442.253,-42.7463,-442.253	1/1:62:0,61,0:0:0:61,0:2124,0:-191.009,-18.3628,0,-191.009,-18.3628,-191.009	1/2:8:0,3,5:0:0:3,5:108,180:-23.8578,-15.0469,-14.1438,-9.17073,0,-7.66558	1/2:78:0,32,45:0:0:32,45:1118,1616:-222.592,-131.824,-122.191,-90.7618,0,-77.2154	1/1:77:0,74,0:0:0:74,0:2564,0:-230.517,-22.2762,0,-230.517,-22.2762,-230.517	1/2:102:0,81,21:0:0:81,21:2857,756:-294.33,-62.0456,-37.6622,-232.643,0,-226.321	1/1:72:0,68,0:0:0:68,0:2395,0:-215.116,-20.47,0,-215.116,-20.47,-215.116	1/2:70:0,38,32:0:0:38,32:1364,1148:-205.09,-93.9969,-82.5577,-111.451,0,-101.818	1/1:32:0,32,0:0:0:32,0:1130,0:-101.751,-9.63296,0,-101.751,-9.63296,-101.751	1/2:106:0,50,56:0:0:50,56:1777,1999:-307.837,-163.325,-148.274,-144.867,0,-128.009	1/1:21:0,21,0:0:0:21,0:744,0:-67.2464,-6.32163,0,-67.2464,-6.32163,-67.2464	1/2:82:0,41,41:0:0:41,41:1455,1464:-238.227,-119.714,-107.372,-118.869,0,-106.527	1/1:79:0,79,0:0:0:79,0:2768,0:-249.11,-23.7814,0,-249.11,-23.7814,-249.11	1/2:62:0,24,38:0:0:24,38:836,1360:-179.14,-111.261,-104.037,-68.2301,0,-56.791	1/2:165:0,84,77:0:0:84,77:2992,2768:-469.417,-225.878,-200.591,-243.592,0,-220.412	1/2:44:0,11,33:0:0:11,33:388,1180:-128.058,-96.5741,-93.2627,-31.8373,0,-21.9034	1/1:80:0,76,0:0:0:76,0:2693,0:-241.677,-22.8783,0,-241.677,-22.8783,-241.677	1/1:74:0,72,1:0:0:72,1:2540,36:-228.243,-21.6742,0,-225.305,-18.6968,-225.004
chr10	707141	.	T	G	72858.9	PASS	AB=0.539843;ABP=113.58;AC=52;AF=0.276596;AN=188;AO=4333;CIGAR=1X;DP=13534;DPB=13534;DPRA=1.21082;EPP=9403.32;EPPR=19969.7;GTI=3;LEN=1;MEANALT=1.03704;MQM=45.8237;MQMR=59.9327;NS=94;NUMALT=1;ODDS=2.35542;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=154601;QR=329437;RO=9199;RPL=1;RPP=9403.32;RPPR=19969.7;RPR=4332;RUN=1;SAF=0;SAP=9412;SAR=4333;SRF=0;SRP=19978.4;SRR=9199;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:30,31:30:1057:31:1101:-78.1567,0,-77.0761	0/0:193:193,0:193:6890:0:0:0,-58.0988,-620.159	0/1:202:90,111:90:3213:111:3953:-290.206,0,-228.518	0/1:406:216,190:216:7744:190:6757:-478.935,0,-574.713	0/1:92:38,54:38:1364:54:1936:-143.457,0,-95.366	0/1:87:52,35:52:1864:35:1256:-85.625,0,-141.85	0/1:237:112,124:112:4016:124:4440:-323.532,0,-290.228	0/1:177:95,82:95:3404:82:2912:-203.805,0,-253.29	0/1:164:80,84:80:2876:84:3012:-217.624,0,-209.707	0/1:167:82,85:82:2940:85:3032:-220.109,0,-214.562	0/1:83:40,43:40:1440:43:1540:-111.042,0,-104.911	0/1:91:48,43:48:1728:43:1530:-108.249,0,-128.412	0/0:105:105,0:105:3772:0:0:0,-31.6081,-339.676	0/0:97:97,0:97:3465:0:0:0,-29.1999,-312.06	0/0:76:76,0:76:2736:0:0:0,-22.8783,-246.482	0/0:63:63,0:63:2241:0:0:0,-18.9649,-201.952	0/1:101:42,59:42:1491:59:2108:-156.587,0,-104.08	0/1:80:27,53:27:972:53:1864:-141.449,0,-62.776	0/1:138:66,72:66:2372:72:2584:-188.059,0,-172.192	0/1:261:140,121:140:5040:121:4319:-304.654,0,-375.174	0/1:233:123,110:123:4416:110:3918:-276.586,0,-327.466	0/1:143:37,106:37:1332:106:3789:-294.49,0,-77.1351	0/1:116:46,70:46:1648:70:2480:-186.206,0,-113.688	0/1:177:86,91:86:3080:91:3255:-235.476,0,-224.146	0/1:124:47,77:47:1692:77:2741:-204.914,0,-115.239	0/0:336:336,0:336:12008:0:0:0,-101.146,-1080.56	0/0:290:290,0:290:10401:0:0:0,-87.2987,-935.937	0/1:54:30,24:30:1080:24:860:-59.938,0,-81.2576	0/1:487:175,312:175:6268:312:11102:-841.311,0,-417.612	0/0:224:224,0:224:8026:0:0:0,-67.4307,-722.353	0/0:157:157,0:157:5594:0:0:0,-47.2617,-503.582	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:16:3,13:3:108:13:468:-37.1224,0,-5.25869	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8618	0/0:262:262,0:262:9356:0:0:0,-78.8699,-842.001	0/1:263:120,143:120:4284:143:5127:-374.488,0,-306.568	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.503	0/1:6:4,2:4:144:2:72:-4.54975,0,-11.5074	0/1:298:128,170:128:4592:170:6066:-443.276,0,-323.737	0/1:77:34,43:34:1220:43:1534:-112.443,0,-86.9275	0/1:236:124,112:124:4403:112:3966:-278.903,0,-325.349	0/1:130:76,54:76:2736:54:1936:-132.936,0,-207.316	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.42	0/0:175:175,0:175:6296:0:0:0,-52.6802,-566.709	0/0:170:170,0:170:6069:0:0:0,-51.1751,-546.31	0/1:312:148,164:148:5281:164:5857:-423.5,0,-381.134	0/0:176:173,3:173:6189:3:108:0,-42.9942,-547.119	0/1:245:85,160:85:3033:160:5703:-432.907,0,-199.447	0/0:290:290,0:290:10416:0:0:0,-87.2987,-937.337	0/1:10:8,2:8:288:2:72:-3.39863,0,-23.2571	0/1:202:91,111:91:3276:111:3992:-293.093,0,-234.25	0/1:85:47,38:47:1688:38:1345:-94.4567,0,-126.349	0/1:26:12,14:12:432:14:495:-35.9889,0,-31.3944	0/0:168:168,0:168:6028:0:0:0,-50.573,-542.578	0/1:122:63,59:63:2253:59:2106:-150.477,0,-166.305	0/1:4:2,2:2:72:2:72:-5.5668,0,-5.6326	0/1:23:9,14:9:324:14:504:-37.9808,0,-22.475	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.243	0/1:154:82,72:82:2940:72:2572:-180.868,0,-218.475	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:259:128,131:128:4588:131:4661:-337.75,0,-335.113	0/0:222:222,0:222:7939:0:0:0,-66.8287,-714.511	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.652	0/0:152:152,0:152:5410:0:0:0,-45.7566,-486.984	0/1:273:109,164:109:3912:164:5837:-435.647,0,-270.091	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/1:38:16,22:16:572:22:784:-57.8446,0,-40.3697	0/0:119:119,0:119:4252:0:0:0,-35.8226,-382.818	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/0:53:53,0:53:1904:0:0:0,-15.9546,-171.637	0/1:234:124,110:124:4433:110:3926:-277.499,0,-328.691	0/0:123:123,0:123:4395:0:0:0,-37.0267,-395.723	0/0:202:201,1:201:7182:1:36:0,-57.2098,-642.795	0/0:153:153,0:153:5492:0:0:0,-46.0576,-494.396	0/0:267:267,0:267:9583:0:0:0,-80.375,-862.417	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.492	0/1:19:7,12:7:252:12:432:-33.0694,0,-17.3094	0/1:197:77,120:77:2757:120:4294:-320.699,0,-189.067	0/0:192:192,0:192:6868:0:0:0,-57.7978,-618.19	0/1:400:175,225:175:6268:225:8035:-593.456,0,-443.802	0/0:115:115,0:115:4120:0:0:0,-34.6184,-370.975	0/1:85:35,50:35:1256:50:1787:-132.262,0,-87.7577	0/0:120:120,0:120:4312:0:0:0,-36.1236,-388.251	0/1:199:88,111:88:3141:111:3943:-288.97,0,-223.008	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.484	0/1:96:55,41:55:1972:41:1472:-102.481,0,-148.856	0/0:92:92,0:92:3292:0:0:0,-27.6948,-296.236	0/1:49:20,29:20:716:29:1034:-76.2984,0,-50.0172	0/1:160:76,84:76:2705:84:3016:-218.48,0,-195.528	0/1:120:40,80:40:1436:80:2860:-217.511,0,-93.4141	0/0:147:147,0:147:5246:0:0:0,-44.2514,-472.275	0/0:117:117,0:117:4196:0:0:0,-35.2205,-377.821
chr10	707163	.	TCTTCG	TCTTCACG,ACTTCACG	266868	PASS	AB=0.437428,0.553734;ABP=268.507,198.802;AC=136,52;AF=0.723404,0.276596;AN=188;AO=8490,4326;CIGAR=4M2I2M,1X3M2I2M;DP=12938;DPB=17248.7;DPRA=0,1.24144;EPP=18369.4,9353.42;EPPR=0;GTI=4;LEN=2,8;MEANALT=2.65957,3.20755;MQM=59.9559,45.8819;MQMR=0;NS=94;NUMALT=2;ODDS=1.78526;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=300711,152586;QR=0;RO=0;RPL=8482,4321;RPP=18369.4,9353.42;RPPR=0;RPR=8,5;RUN=1,1;SAF=0,0;SAP=18438.8,9396.8;SAR=8490,4326;SRF=0;SRP=0;SRR=0;TYPE=ins,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:57:0,26,31:0:0:26,31:924,1076:-161.288,-85.9857,-78.1589,-75.6509,0,-66.3189	1/1:178:0,171,0:0:0:171,0:6076,0:-546.611,-51.4761,0,-546.611,-51.4761,-546.611	1/2:192:0,78,113:0:0:78,113:2761,3960:-542.557,-317.667,-294.186,-224.881,0,-190.865	1/2:396:0,200,191:0:0:200,191:7054,6735:-1116.67,-542.296,-482.09,-574.43,0,-516.933	1/2:86:0,32,54:0:0:32,54:1131,1906:-244.636,-152.522,-142.889,-92.4648,0,-76.2092	1/2:85:0,48,36:0:0:48,36:1657,1276:-237.253,-102.638,-88.1886,-134.603,0,-123.766	1/2:231:0,106,124:0:0:106,124:3757,4374:-658.121,-352.051,-320.141,-306.082,0,-268.754	1/2:170:0,86,81:0:0:86,81:3025,2805:-470.553,-224.305,-198.417,-246.236,0,-221.852	1/2:159:0,76,81:0:0:76,81:2665,2864:-446.656,-229.786,-206.908,-216.881,0,-192.498	1/2:160:0,73,86:0:0:73,86:2592,3055:-457.705,-246.504,-224.529,-211.245,0,-185.357	1/2:79:0,35,43:0:0:35,43:1248,1502:-222.011,-120.274,-109.738,-101.729,0,-88.7848	1/2:88:0,45,43:0:0:45,43:1608,1509:-252.437,-121.325,-107.779,-131.464,0,-118.519	1/1:99:0,98,0:0:0:98,0:3469,0:-312.061,-29.5009,0,-312.061,-29.5009,-312.061	1/1:82:0,81,0:0:0:81,0:2873,0:-258.446,-24.3834,0,-258.446,-24.3834,-258.446	1/1:73:0,72,0:0:0:72,0:2567,0:-230.999,-21.6742,0,-230.999,-21.6742,-230.999	1/1:59:0,57,0:0:0:57,0:2010,0:-180.842,-17.1587,0,-180.842,-17.1587,-180.842	1/2:101:0,41,58:0:0:41,58:1443,2056:-282.872,-165.4,-153.058,-117.526,0,-100.066	1/2:79:0,26,53:0:0:26,53:914,1866:-224.4,-150.321,-142.494,-74.4286,0,-58.4741	1/2:134:0,61,73:0:0:61,73:2158,2579:-383.411,-207.639,-189.276,-176.123,0,-154.148	1/2:255:0,131,118:0:0:131,118:4644,4155:-712.386,-334.046,-294.611,-378.37,0,-342.848	1/2:228:0,114,112:0:0:114,112:4043,3959:-646.657,-317.267,-282.949,-329.46,0,-295.744	1/2:142:0,36,106:0:0:36,106:1276,3768:-408.273,-304.32,-293.483,-104.306,0,-72.3968	1/2:115:0,42,71:0:0:42,71:1484,2519:-323.728,-202.869,-190.226,-120.852,0,-99.4786	1/2:174:0,82,92:0:0:82,92:2876,3260:-495.719,-261.675,-236.99,-234.394,0,-206.699	1/2:122:0,45,75:0:0:45,75:1576,2646:-340.251,-212.017,-198.471,-128.276,0,-105.698	1/1:307:0,304,0:0:0:304,0:10734,0:-965.656,-91.5131,0,-965.656,-91.5131,-965.656	1/1:276:0,275,0:0:0:275,0:9727,0:-874.968,-82.7833,0,-874.968,-82.7833,-874.968	1/2:51:0,27,24:0:0:27,24:938,846:-144.285,-68.028,-59.9002,-76.604,0,-69.3793	1/2:485:0,169,312:0:0:169,312:6008,11009:-1376.75,-887.143,-836.269,-489.687,0,-395.766	1/1:209:0,207,0:0:0:207,0:7358,0:-661.929,-62.3132,0,-661.929,-62.3132,-661.929	1/1:142:0,139,0:0:0:139,0:4907,0:-441.426,-41.8432,0,-441.426,-41.8432,-441.426	1/1:11:0,11,0:0:0:11,0:392,0:-35.6201,-3.31133,0,-35.6201,-3.31133,-35.6201	1/2:16:0,3,13:0:0:3,13:108,467:-46.754,-37.9408,-37.0377,-9.17208,0,-5.25869	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/1:17:0,16,0:0:0:16,0:564,0:-50.8252,-4.81648,0,-50.8252,-4.81648,-50.8252	1/1:245:0,245,0:0:0:245,0:8698,0:-782.821,-73.7524,0,-782.821,-73.7524,-782.821	1/2:260:0,113,143:0:0:113,143:3984,5074:-730.967,-406.581,-372.564,-324.404,0,-281.357	1/1:85:0,85,0:0:0:85,0:2998,0:-270.054,-25.5876,0,-270.054,-25.5876,-270.054	1/2:6:0,4,2:0:0:4,2:144,69:-17.4062,-5.63554,-4.43142,-12.1095,0,-11.5074	1/2:293:0,121,171:0:0:121,171:4300,5994:-828.107,-477.705,-441.28,-350.393,0,-298.917	1/2:77:0,34,41:0:0:34,41:1211,1441:-214.105,-115.396,-105.161,-98.7315,0,-86.3893	1/2:225:0,113,112:0:0:113,112:3983,3949:-639.876,-315.623,-281.607,-324.602,0,-290.887	1/2:126:0,72,54:0:0:72,54:2575,1917:-364.328,-154.388,-132.714,-210.293,0,-194.038	1/1:67:0,67,0:0:0:67,0:2372,0:-213.735,-20.169,0,-213.735,-20.169,-213.735	1/1:163:0,162,0:0:0:162,0:5709,0:-513.673,-48.7669,0,-513.673,-48.7669,-513.673	1/1:156:0,156,0:0:0:156,0:5539,0:-498.637,-46.9607,0,-498.637,-46.9607,-498.637	1/2:300:0,132,164:0:0:132,164:4715,5781:-848.92,-464.498,-424.762,-384.496,0,-335.127	1/1:164:0,159,3:0:0:159,3:5610,101:-504.681,-47.8638,0,-496.556,-39.7536,-495.653	1/2:243:0,82,161:0:0:82,161:2902,5700:-694.955,-458.578,-433.894,-236.73,0,-188.264	1/1:273:0,270,0:0:0:270,0:9530,0:-857.335,-81.2781,0,-857.335,-81.2781,-857.335	1/2:9:0,7,2:0:0:7,2:239,69:-25.0398,-5.63552,-3.52831,-19.7355,0,-19.1334	1/2:197:0,82,112:0:0:82,112:2923,3963:-556.728,-318.461,-293.776,-238.275,0,-204.56	1/2:81:0,42,38:0:0:42,38:1504,1332:-229.924,-107.265,-94.6214,-122.691,0,-111.251	1/2:26:0,12,14:0:0:12,14:428,479:-73.4475,-38.5485,-34.9361,-35.2464,0,-31.032	1/1:15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chr10	785363	.	C	T	167793	PASS	AB=0.444113;ABP=194.267;AC=136;AF=0.723404;AN=188;AO=8231;CIGAR=1X;DP=12172;DPB=12172;DPRA=0;EPP=17876.4;EPPR=8543.41;GTI=1;LEN=1;MEANALT=1.08511;MQM=59.9858;MQMR=59.9985;NS=94;NUMALT=1;ODDS=1.0887;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=294065;QR=140750;RO=3933;RPL=0;RPP=17876.4;RPPR=8543.41;RPR=8231;RUN=1;SAF=8231;SAP=17876.4;SAR=0;SRF=3933;SRP=8543.41;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:121:77,44:77:2772:44:1565:-104.715,0,-213.296	1/1:83:0,83:0:0:83:2943:-265.101,-24.9855,0	0/1:243:134,109:134:4765:109:3912:-279.122,0,-355.859	0/1:267:154,113:154:5513:113:4025:-282.062,0,-415.919	0/1:93:44,49:44:1568:49:1760:-130.688,0,-113.416	0/1:35:16,19:16:576:19:680:-50.9931,0,-41.6389	0/1:124:66,58:66:2368:58:2084:-150.502,0,-176.05	0/1:176:125,51:125:4465:51:1797:-109.029,0,-349.038	0/1:228:95,133:95:3392:133:4657:-350.656,0,-236.861	0/1:122:63,59:63:2260:59:2108:-153.264,0,-166.937	0/1:90:41,49:41:1476:49:1756:-131.231,0,-106.043	0/1:165:94,71:94:3372:71:2525:-177.831,0,-254.025	1/1:125:0,125:0:0:125:4465:-402.02,-37.6288,0	1/1:194:0,194:0:0:194:6934:-624.124,-58.3998,0	1/1:106:0,106:0:0:106:3812:-343.276,-31.9092,0	1/1:169:0,169:0:0:169:6015:-541.446,-50.8741,0	0/1:57:31,26:31:1116:26:932:-67.0402,0,-83.593	0/1:51:24,27:24:855:27:972:-72.4454,0,-61.9176	0/1:71:33,38:33:1180:38:1368:-102.048,0,-85.1349	0/1:218:115,103:115:4120:103:3658:-263.798,0,-305.36	0/1:301:199,101:199:7109:101:3598:-233.395,0,-549.24	0/1:102:76,25:76:2712:25:896:-50.3406,0,-213.708	0/1:161:96,65:96:3440:65:2324:-160.954,0,-261.347	0/1:150:75,75:75:2696:75:2685:-196.738,0,-197.727	0/1:179:98,80:98:3496:80:2872:-204.921,0,-261.057	1/1:267:5,262:5:180:262:9369:-826.621,-63.8229,0	1/1:245:0,245:0:0:245:8789:-790.995,-73.7524,0	0/1:35:20,15:20:720:15:540:-38.4005,0,-54.5927	0/1:320:178,142:178:6377:142:5070:-360.113,0,-477.687	0/1:141:70,71:70:2508:71:2533:-185.775,0,-183.527	1/1:150:0,150:0:0:150:5368:-483.252,-45.1545,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:52:31,21:31:1093:21:748:-51.9917,0,-83.0241	1/1:8:0,8:0:0:8:269:-24.5361,-2.40824,0	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	1/1:46:1,45:1:36:45:1612:-141.772,-10.2491,0	1/1:238:0,238:0:0:238:8460:-761.401,-71.6451,0	0/1:107:65,42:65:2332:42:1508:-103.804,0,-177.929	1/1:97:0,97:0:0:97:3476:-313.051,-29.1999,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:134:66,67:66:2368:67:2378:-174.026,0,-173.129	0/1:72:41,31:41:1467:31:1112:-78.7172,0,-110.651	0/1:320:179,140:179:6404:140:5012:-354.839,0,-480.061	0/1:100:45,55:45:1612:55:1965:-147.02,0,-115.267	1/1:61:0,61:0:0:61:2188:-197.186,-18.3628,0	1/1:147:0,147:0:0:147:5284:-475.693,-44.2514,0	1/1:130:0,130:0:0:130:4656:-419.202,-39.1339,0	0/1:170:111,59:111:3961:59:2109:-138.903,0,-305.505	1/1:119:0,119:0:0:119:4268:-384.297,-35.8226,0	0/1:146:77,68:77:2748:68:2444:-176.205,0,-203.554	1/1:185:0,185:0:0:185:6621:-595.968,-55.6906,0	0/1:16:12,4:12:432:4:140:-8.1281,0,-34.4047	0/1:168:103,65:103:3688:65:2313:-157.856,0,-281.55	0/1:119:62,56:62:2228:56:2012:-145.619,0,-165.05	0/1:6:1,5:1:36:5:165:-13.3674,0,-1.79209	1/1:148:3,145:3:108:145:5188:-456.985,-34.4773,0	0/1:115:68,47:68:2409:47:1688:-117.588,0,-182.447	0/1:32:15,17:15:540:17:612:-45.7805,0,-39.3036	0/1:22:17,5:17:608:5:180:-9.9294,0,-48.4294	1/1:137:0,137:0:0:137:4893:-440.521,-41.2411,0	0/1:143:66,77:66:2376:77:2764:-205.954,0,-171.05	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:163:72,91:72:2592:91:3256:-244.087,0,-184.46	1/1:181:1,180:1:36:180:6445:-576.536,-50.8882,0	1/1:115:0,115:0:0:115:4043:-364.018,-34.6185,0	1/1:60:0,60:0:0:60:2148:-193.587,-18.0618,0	0/1:281:171,110:171:6140:110:3944:-270.562,0,-468.108	1/1:260:3,257:3:108:257:9173:-815.469,-68.1926,0	0/1:90:45,45:45:1612:45:1616:-118.637,0,-118.277	1/1:111:0,111:0:0:111:3949:-355.532,-33.4143,0	1/1:59:1,58:1:36:58:2084:-184.232,-14.1625,0	1/1:51:0,51:0:0:51:1832:-165.143,-15.3525,0	0/1:180:111,69:111:3968:69:2431:-164.848,0,-303.126	1/1:137:0,137:0:0:137:4911:-442.136,-41.2411,0	1/1:276:2,274:2:68:274:9695:-866.045,-76.6266,0	1/1:184:1,183:1:21:183:6566:-588.919,-53.2896,0	1/1:139:0,139:0:0:139:4977:-448.059,-41.8432,0	1/1:77:2,75:2:72:75:2688:-235.328,-16.3426,0	0/1:50:27,23:27:964:23:809:-58.0768,0,-72.0253	0/1:125:75,50:75:2672:50:1796:-124.294,0,-203.097	1/1:135:0,135:0:0:135:4784:-430.718,-40.6391,0	0/1:285:146,139:146:5232:139:4992:-363.632,0,-385.224	1/1:80:1,79:1:36:79:2806:-249.179,-20.4841,0	1/1:98:0,97:0:0:97:3490:-313.95,-29.1999,0	1/1:75:1,74:1:36:74:2652:-235.328,-18.979,0	0/1:173:95,78:95:3408:78:2785:-198.811,0,-254.856	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0	0/1:98:54,44:54:1923:44:1580:-112.991,0,-143.845	1/1:113:0,113:0:0:113:4045:-364.236,-34.0164,0	0/1:93:48,45:48:1712:45:1601:-116.382,0,-126.37	0/1:214:98,116:98:3520:116:4164:-310.521,0,-252.588	0/1:121:83,38:83:2968:38:1364:-86.6361,0,-230.929	1/1:77:0,77:0:0:77:2762:-248.821,-23.1793,0	1/1:151:0,151:0:0:151:5416:-487.569,-45.4555,0
chr10	785380	.	A	C	170932	PASS	AB=0.446429;ABP=180.296;AC=136;AF=0.723404;AN=188;AO=8349;CIGAR=1X;DP=12308;DPB=12308;DPRA=0;EPP=18080.6;EPPR=8502.33;GTI=1;LEN=1;MEANALT=1.07447;MQM=59.9842;MQMR=59.9985;NS=94;NUMALT=1;ODDS=1.59218;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=298375;QR=139493;RO=3950;RPL=6;RPP=18080.6;RPPR=8502.33;RPR=8343;RUN=1;SAF=8349;SAP=18132.6;SAR=0;SRF=3950;SRP=8580.33;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:122:78,44:78:2793:44:1580:-105.766,0,-214.883	1/1:85:0,85:0:0:85:3039:-273.74,-25.5876,0	0/1:242:131,111:131:4610:111:3992:-286.619,0,-342.212	0/1:270:155,115:155:5444:115:4106:-288.445,0,-408.808	0/1:94:45,49:45:1585:49:1764:-130.747,0,-114.642	0/1:36:16,20:16:546:20:711:-53.4786,0,-38.6222	0/1:126:67,59:67:2385:59:2107:-151.969,0,-176.976	0/1:177:127,50:127:4446:50:1788:-107.92,0,-347.025	0/1:231:96,135:96:3279:135:4779:-360.727,0,-225.784	0/1:121:64,57:64:2262:57:2048:-148.167,0,-167.415	0/1:90:41,49:41:1449:49:1760:-131.591,0,-103.611	0/1:162:91,69:91:3272:69:2471:-174.119,0,-246.174	1/1:127:0,126:0:0:126:4458:-401.03,-37.9298,0	1/1:201:0,201:0:0:201:7194:-647.515,-60.507,0	1/1:106:0,106:0:0:106:3804:-342.557,-31.9092,0	1/1:171:0,170:0:0:170:6077:-546.625,-51.1751,0	0/1:56:30,26:30:1035:26:928:-66.9806,0,-76.5951	0/1:53:25,28:25:885:28:1008:-75.0818,0,-64.0119	0/1:69:32,37:32:1125:37:1324:-98.691,0,-80.785	0/1:220:117,101:117:4133:101:3612:-259.302,0,-306.166	0/1:295:196,99:196:6950:99:3531:-229.194,0,-536.759	0/1:111:82,29:82:2895:29:1040:-60.5,0,-227.369	0/1:161:96,65:96:3421:65:2315:-160.144,0,-259.637	0/1:155:77,78:77:2764:78:2789:-204.589,0,-202.337	0/1:182:99,83:99:3463:83:2973:-213.015,0,-257.091	1/1:273:4,269:4:144:269:9585:-849.295,-68.8676,0	1/1:240:1,239:1:36:239:8555:-766.35,-68.6489,0	0/1:37:22,15:22:784:15:540:-37.7984,0,-59.7458	0/1:320:177,143:177:6322:143:5112:-363.893,0,-472.74	0/1:143:71,72:71:2514:72:2576:-189.042,0,-183.462	1/1:151:0,151:0:0:151:5377:-484.061,-45.4555,0	1/1:15:0,15:0:0:15:527:-47.7602,-4.51545,0	0/1:52:31,21:31:1082:21:756:-52.7137,0,-82.0311	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	1/1:51:0,51:0:0:51:1832:-165.161,-15.3525,0	1/1:239:0,239:0:0:239:8572:-771.473,-71.9462,0	0/1:111:69,42:69:2453:42:1512:-102.96,0,-187.609	1/1:98:0,98:0:0:98:3524:-317.368,-29.5009,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:137:67,70:67:2412:70:2492:-183.293,0,-176.095	0/1:74:42,32:42:1508:32:1148:-81.3536,0,-113.738	0/1:323:177,146:177:6137:146:5195:-370.456,0,-455.195	0/1:100:45,55:45:1601:55:1972:-147.652,0,-114.275	1/1:61:0,61:0:0:61:2162:-194.846,-18.3628,0	1/1:152:0,152:0:0:152:5444:-490.089,-45.7566,0	1/1:134:1,133:1:36:133:4757:-424.688,-36.7397,0	0/1:173:112,61:112:3963:61:2172:-143.668,0,-304.782	1/1:120:0,120:0:0:120:4284:-385.738,-36.1236,0	0/1:147:80,67:80:2831:67:2393:-171.375,0,-210.774	1/1:185:0,185:0:0:185:6634:-597.136,-55.6906,0	0/1:16:12,4:12:432:4:144:-8.49714,0,-34.4047	0/1:167:102,65:102:3574:65:2332:-159.868,0,-271.591	0/1:120:62,58:62:2198:58:2080:-151.347,0,-161.958	0/1:6:1,5:1:36:5:171:-13.9193,0,-1.79209	1/1:151:3,147:3:108:147:5255:-463.011,-35.4392,0	0/1:116:66,50:66:2353:50:1796:-127.003,0,-177.108	0/1:31:15,16:15:540:16:576:-42.8431,0,-39.6046	0/1:22:17,5:17:612:5:180:-9.9294,0,-48.7908	1/1:137:0,137:0:0:137:4895:-440.702,-41.2411,0	0/1:143:67,76:67:2408:76:2720:-201.996,0,-173.929	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	0/1:163:73,90:73:2583:90:3207:-239.68,0,-183.647	1/1:186:1,185:1:36:185:6601:-590.574,-52.3933,0	1/1:115:0,115:0:0:115:4096:-368.81,-34.6185,0	1/1:61:0,61:0:0:61:2175:-196.016,-18.3628,0	0/1:283:172,111:172:5951:111:3967:-272.029,0,-450.504	1/1:265:3,262:3:108:262:9362:-832.469,-69.6978,0	0/1:90:44,46:44:1565:46:1656:-122.236,0,-114.047	1/1:115:0,115:0:0:115:4111:-370.151,-34.6185,0	1/1:58:0,58:0:0:58:2076:-187.111,-17.4597,0	1/1:50:0,50:0:0:50:1796:-161.905,-15.0515,0	0/1:185:108,76:108:3748:76:2720:-189.286,0,-281.767	1/1:139:0,139:0:0:139:4936:-444.39,-41.8432,0	1/1:282:1,281:1:21:281:10055:-902.783,-82.7905,0	1/1:185:0,185:0:0:185:6607:-594.709,-55.6906,0	1/1:147:0,147:0:0:147:5203:-468.406,-44.2514,0	1/1:76:2,74:2:53:74:2652:-233.892,-17.844,0	0/1:53:29,24:29:1006:24:860:-61.7672,0,-74.892	0/1:132:80,52:80:2846:52:1857:-127.673,0,-216.639	1/1:134:0,134:0:0:134:4778:-430.175,-40.338,0	0/1:290:147,143:147:5239:143:5101:-371.932,0,-384.346	1/1:81:1,80:1:36:80:2867:-254.668,-20.7852,0	1/1:99:0,99:0:0:99:3534:-318.269,-29.802,0	1/1:76:0,76:0:0:76:2723:-245.312,-22.8783,0	0/1:169:94,75:94:3316:75:2694:-191.83,0,-247.78	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0	0/1:98:55,43:55:1942:43:1544:-109.752,0,-145.551	1/1:115:0,115:0:0:115:4118:-370.759,-34.6185,0	0/1:93:48,45:48:1709:45:1603:-116.564,0,-126.098	0/1:220:97,123:97:3462:123:4416:-331.384,0,-245.563	0/1:120:81,39:81:2866:39:1392:-89.4554,0,-222.052	1/1:79:1,78:1:36:78:2792:-247.922,-20.1831,0	1/1:153:0,152:0:0:152:5408:-486.53,-45.7566,0
chr10	817318	.	G	A	41574.3	PASS	AB=0.533274;ABP=45.9284;AC=53;AF=0.281915;AN=188;AO=2401;CIGAR=1X;DP=8126;DPB=8126;DPRA=1.08212;EPP=5190.69;EPPR=12036;GTI=1;LEN=1;MEANALT=1.01724;MQM=59.9963;MQMR=60;NS=94;NUMALT=1;ODDS=4.82601;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=86017;QR=204963;RO=5720;RPL=2399;RPP=5199.36;RPPR=12070.3;RPR=2;RUN=1;SAF=1;SAP=5208.03;SAR=2400;SRF=4;SRP=12389.1;SRR=5716;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:49:27,22:27:964:22:784:-56.1334,0,-72.3264	0/0:88:87,0:87:3104:0:0:0,-26.1896,-279.228	0/1:369:218,151:218:7792:151:5424:-377.207,0,-590.232	0/1:164:68,96:68:2440:96:3433:-259.814,0,-170.486	0/1:57:26,31:26:936:31:1108:-82.8723,0,-67.4008	0/1:25:16,9:16:576:9:324:-21.9801,0,-44.6492	0/1:96:40,56:40:1440:56:2004:-151.735,0,-100.999	0/1:138:59,79:59:2116:79:2828:-213.209,0,-149.167	0/1:90:45,45:45:1604:45:1600:-117.197,0,-117.557	0/1:84:41,43:41:1472:43:1521:-111.895,0,-107.49	0/1:64:33,31:33:1188:31:1108:-80.7651,0,-87.9627	0/1:98:39,59:39:1400:59:2116:-161.208,0,-96.7982	0/0:95:95,0:95:3400:0:0:0,-28.5978,-306.215	0/0:64:64,0:64:2288:0:0:0,-19.2659,-206.182	0/0:61:61,0:61:2188:0:0:0,-18.3628,-197.186	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.332	0/1:43:23,20:23:824:20:720:-52.1845,0,-61.539	0/1:37:14,23:14:500:23:824:-63.3452,0,-34.1981	0/1:47:27,20:27:972:20:709:-49.9863,0,-73.6495	0/1:139:47,92:47:1692:92:3312:-256.454,0,-110.724	0/1:116:46,70:46:1652:70:2504:-190.693,0,-114.049	0/1:53:18,35:18:644:35:1248:-96.6703,0,-42.336	0/1:63:25,38:25:892:38:1356:-103.376,0,-61.6348	0/1:38:11,27:11:396:27:957:-75.0047,0,-24.5436	0/1:83:44,39:44:1572:39:1400:-101.314,0,-116.786	0/0:135:135,0:135:4852:0:0:0,-40.639,-436.832	0/0:310:309,1:309:11068:1:36:0,-89.721,-992.413	0/1:49:26,23:26:932:23:828:-60.0936,0,-69.4484	0/1:239:120,119:120:4300:119:4264:-311.992,0,-315.23	0/1:87:43,44:43:1548:44:1580:-116.302,0,-113.423	0/0:70:70,0:70:2496:0:0:0,-21.0721,-224.893	0/0:28:27,0:27:972:0:0:0,-8.12781,-87.4381	0/1:18:12,6:12:432:6:216:-14.372,0,-33.8027	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6706	0/0:153:152,0:152:5456:0:0:0,-45.7566,-490.956	0/1:70:41,29:41:1468:29:1036:-72.4818,0,-111.344	0/0:73:73,0:73:2616:0:0:0,-21.9752,-235.688	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/1:155:71,84:71:2544:84:2993:-222.941,0,-182.551	0/1:51:27,24:27:972:24:864:-62.73,0,-72.4454	0/1:203:117,86:117:4153:86:3088:-217.038,0,-312.846	0/1:67:28,39:28:1008:39:1400:-106.13,0,-70.8673	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.516	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/0:153:153,0:153:5496:0:0:0,-46.0576,-494.764	0/1:123:49,73:49:1760:73:2612:-198.243,0,-121.598	0/0:41:40,1:40:1428:1:36:0,-8.74395,-125.219	0/1:112:49,63:49:1760:63:2264:-170.307,0,-124.969	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.165	0/1:12:6,6:6:216:6:216:-16.1782,0,-16.1782	0/1:101:46,55:46:1652:55:1976:-147.711,0,-118.564	0/1:65:30,35:30:1080:35:1260:-94.1385,0,-77.9463	1/1:12:1,11:1:36:11:388:-31.6591,-0.0140851,0	0/0:164:163,0:163:5832:0:0:0,-49.0679,-524.633	0/1:31:16,15:16:576:15:532:-38.8812,0,-42.8431	0/1:22:12,10:12:432:10:356:-25.7586,0,-32.5985	0/1:17:8,9:8:288:9:324:-24.3883,0,-21.1499	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/1:93:41,52:41:1460:52:1868:-140.403,0,-103.7	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:109:40,69:40:1428:69:2476:-190.281,0,-96.0053	0/0:135:135,0:135:4848:0:0:0,-40.639,-436.472	0/0:56:55,1:55:1960:1:36:0,-13.2594,-173.077	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/1:115:50,65:50:1796:65:2324:-174.802,0,-127.304	0/0:129:126,3:126:4524:3:108:0,-28.7577,-397.251	0/1:59:35,24:35:1239:24:860:-59.9611,0,-94.0529	0/0:64:62,2:62:2216:2:72:0,-12.4292,-192.868	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:68:34,34:34:1212:34:1216:-89.2765,0,-88.9163	0/0:136:136,0:136:4868:0:0:0,-40.9401,-438.273	0/0:87:87,0:87:3116:0:0:0,-26.1896,-280.667	0/0:202:202,0:202:7248:0:0:0,-60.8081,-652.371	0/0:129:129,0:129:4628:0:0:0,-38.8329,-416.682	0/0:91:91,0:91:3276:0:0:0,-27.3937,-295.059	0/1:20:11,9:11:392:9:324:-23.4853,0,-29.5995	0/1:111:52,59:52:1868:59:2120:-157.654,0,-134.985	0/0:183:183,0:183:6536:0:0:0,-55.0885,-588.325	0/1:149:51,98:51:1832:98:3508:-271.077,0,-120.307	0/0:60:60,0:60:2152:0:0:0,-18.0618,-193.947	0/0:81:81,0:81:2900:0:0:0,-24.3834,-261.236	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.274	0/1:136:64,72:64:2300:72:2592:-192.588,0,-166.321	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:60:30,30:30:1072:30:1072:-78.7307,0,-78.7307	0/0:72:72,0:72:2568:0:0:0,-21.6742,-231.37	0/1:65:29,36:29:1044:36:1296:-97.377,0,-74.7079	0/1:102:47,55:47:1688:55:1972:-147.05,0,-121.502	0/1:92:25,67:25:900:67:2408:-189.281,0,-53.6263	0/0:94:94,0:94:3367:0:0:0,-28.2968,-303.245	0/0:89:87,2:87:3116:2:72:0,-19.9549,-273.83
chr10	899317	.	TAAC	GAAA,AAAA	204817	PASS	AB=0.491941,0.504396;ABP=6.09013,3.92661;AC=136,52;AF=0.723404,0.276596;AN=188;AO=6962,2768;CIGAR=1X2M1X,1X2M1X;DP=9769;DPB=9774;DPRA=26.25,1.15187;EPP=15112.1,5996.29;EPPR=0;GTI=1;LEN=4,4;MEANALT=1.98925,2.38596;MQM=59.4912,59.4053;MQMR=0;NS=94;NUMALT=2;ODDS=1.98136;PAIRED=0,0;PAIREDR=0;PAO=8,8;PQA=250,250;PQR=0;PRO=0;QA=245437,97814;QR=0;RO=0;RPL=14,5;RPP=14999.4,5970.29;RPPR=0;RPR=6948,2763;RUN=1,1;SAF=13,3;SAP=15008.1,5987.62;SAR=6949,2765;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:93:0,45,48:0:0:45,48:1591,1693:-267.72,-138.175,-124.628,-129.899,0,-115.449	1/1:90:0,90,0:0:0:90,0:3111,0:-280.211,-27.0927,0,-280.211,-27.0927,-280.211	1/2:255:0,119,135:0:0:119,135:4160,4758:-725.224,-387.425,-351.603,-337.898,0,-297.259	1/2:265:0,129,135:0:0:129,135:4538,4793:-759.633,-390.362,-351.529,-369.195,0,-328.556	1/2:96:0,57,38:0:0:57,38:2023,1339:-273.802,-108.989,-91.8301,-164.787,0,-153.348	1/2:42:0,24,18:0:0:24,18:851,639:-121.658,-52.4156,-45.1909,-69.5966,0,-64.178	1/2:102:0,57,45:0:0:57,45:2028,1595:-295.444,-130.171,-113.012,-165.511,0,-151.965	1/2:190:0,97,92:0:0:97,92:3421,3203:-538.929,-260.42,-231.22,-278.642,0,-250.948	1/2:144:0,84,60:0:0:84,60:2952,2114:-412.521,-172.431,-147.145,-240.441,0,-222.38	1/2:99:0,44,55:0:0:44,55:1557,1945:-285.436,-158.619,-145.374,-127.112,0,-110.555	1/2:33:0,17,16:0:0:17,16:592,568:-94.7687,-46.6314,-41.5139,-48.4889,0,-43.6724	1/2:85:0,42,43:0:0:42,43:1485,1518:-244.884,-123.955,-111.312,-121.282,0,-108.338	1/1:75:0,75,0:0:0:75,0:2646,0:-238.329,-22.5773,0,-238.329,-22.5773,-238.329	1/1:40:0,40,0:0:0:40,0:1417,0:-127.808,-12.0412,0,-127.808,-12.0412,-127.808	1/1:49:0,48,0:0:0:48,0:1708,0:-153.724,-14.4494,0,-153.724,-14.4494,-153.724	1/1:65:0,65,0:0:0:65,0:2273,0:-204.788,-19.567,0,-204.788,-19.567,-204.788	1/2:39:0,23,16:0:0:23,16:811,568:-112.44,-46.6033,-39.6796,-66.1897,0,-61.3732	1/1:24:0,24,0:0:0:24,0:864,0:-78.0826,-7.22472,0,-78.0826,-7.22472,-78.0826	1/2:22:0,10,12:0:0:10,12:358,432:-64.7247,-35.5304,-32.5201,-29.5526,0,-25.9403	1/2:244:0,131,113:0:0:131,113:4624,3980:-700.878,-324.349,-284.914,-376.881,0,-342.865	1/2:148:0,43,103:0:0:43,103:1526,3611:-418.011,-293.689,-280.744,-124.316,0,-93.3102	1/2:166:0,44,122:0:0:44,122:1549,4363:-482.199,-356.1,-342.855,-126.452,0,-89.7263	1/2:121:0,51,70:0:0:51,70:1799,2466:-347.573,-201.097,-185.744,-146.828,0,-125.756	1/2:102:0,69,33:0:0:69,33:2459,1154:-294.638,-94.2136,-73.4426,-200.776,0,-190.842	1/2:132:0,75,57:0:0:75,57:2655,2024:-381.49,-165.25,-142.673,-216.594,0,-199.435	1/1:241:0,241,0:0:0:241,0:8516,0:-766.393,-72.5482,0,-766.393,-72.5482,-766.393	1/1:209:0,209,0:0:0:209,0:7416,0:-667.345,-62.9153,0,-667.345,-62.9153,-667.345	1/2:18:0,11,7:0:0:11,7:383,252:-52.0539,-20.9217,-17.6104,-31.4874,0,-29.3802	1/2:286:0,163,123:0:0:163,123:5764,4389:-827.414,-358.091,-309.023,-469.679,0,-432.652	1/2:103:0,49,53:0:0:49,53:1715,1882:-292.905,-153.4,-138.649,-139.556,0,-123.601	1/1:102:0,102,0:0:0:102,0:3603,0:-324.415,-30.7051,0,-324.415,-30.7051,-324.415	1/1:9:0,9,0:0:0:9,0:323,0:-29.4151,-2.70927,0,-29.4151,-2.70927,-29.4151	1/2:16:0,6,10:0:0:6,10:210,352:-46.0922,-29.0073,-27.2011,-17.4355,0,-14.4252	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:8:0,8,0:0:0:8,0:282,0:-25.7033,-2.40824,0,-25.7033,-2.40824,-25.7033	1/1:18:0,18,0:0:0:18,0:637,0:-57.6219,-5.41854,0,-57.6219,-5.41854,-57.6219	1/1:132:0,131,0:0:0:131,0:4598,0:-413.33,-39.4349,0,-413.33,-39.4349,-413.33	1/2:163:0,77,86:0:0:77,86:2718,3015:-466.794,-245.525,-222.346,-221.62,0,-195.732	1/1:39:0,38,0:0:0:38,0:1337,0:-120.268,-11.4391,0,-120.268,-11.4391,-120.268	2/2:4:0,0,4:0:0:0,4:0,139:-12.8522,-12.8522,-12.8522,-1.20412,-1.20412,0	1/2:158:0,80,77:0:0:80,77:2794,2723:-448.268,-221.075,-196.992,-227.243,0,-204.064	1/2:28:0,16,12:0:0:16,12:551,430:-80.1729,-35.4278,-30.6113,-45.0972,0,-41.4849	1/2:205:0,106,98:0:0:106,98:3748,3507:-590.804,-285.57,-253.661,-305.343,0,-275.842	1/2:64:0,33,31:0:0:33,31:1185,1116:-188.078,-91.4174,-81.4834,-97.02,0,-87.6881	1/1:48:0,48,0:0:0:48,0:1679,0:-151.391,-14.4494,0,-151.391,-14.4494,-151.391	1/1:188:0,188,0:0:0:188,0:6560,0:-590.39,-56.5936,0,-590.39,-56.5936,-590.39	1/1:314:0,313,0:0:0:313,0:11065,0:-994.855,-94.2224,0,-994.855,-94.2224,-994.855	1/2:136:0,66,70:0:0:66,70:2342,2460:-390.908,-200.122,-180.254,-191.138,0,-170.066	1/1:64:0,63,0:0:0:63,0:2231,0:-200.784,-18.9649,0,-200.784,-18.9649,-200.784	1/2:136:0,67,68:0:0:67,68:2357,2410:-388.072,-196.222,-176.053,-191.844,0,-171.374	1/1:125:0,125,0:0:0:125,0:4421,0:-397.989,-37.6288,0,-397.989,-37.6288,-397.989	1/2:8:0,6,2:0:0:6,2:209,72:-23.2221,-6.23466,-4.42848,-17.3444,0,-16.7423	1/2:214:0,111,102:0:0:111,102:3905,3595:-610.345,-292.559,-259.145,-317.778,0,-287.073	1/2:72:0,38,33:0:0:38,33:1351,1162:-204.68,-94.5877,-83.1486,-110.086,0,-100.152	1/2:11:0,9,2:0:0:9,2:311,72:-31.492,-6.23466,-3.52539,-25.6146,0,-25.0125	1/1:231:0,229,0:0:0:229,0:8092,0:-727.743,-68.9359,0,-727.743,-68.9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chr10	1021414	.	C	T	18080.9	PASS	AB=0.430855;ABP=114.719;AC=49;AF=0.260638;AN=188;AO=1165;CIGAR=1X;DP=5214;DPB=5214;DPRA=1.0843;EPP=2532.78;EPPR=8786.62;GTI=1;LEN=1;MEANALT=1.03774;MQM=59.8618;MQMR=59.6616;NS=94;NUMALT=1;ODDS=2.07606;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41664;QR=144450;RO=4045;RPL=0;RPP=2532.78;RPPR=8786.62;RPR=1165;RUN=1;SAF=1165;SAP=2532.78;SAR=0;SRF=4045;SRP=8786.62;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:42:28,14:28:1004:14:500:-32.6929,0,-77.9264	0/0:64:64,0:64:2300:0:0:0,-19.2659,-207.249	0/1:87:55,32:55:1976:32:1148:-77.4402,0,-151.906	0/1:141:87,54:87:3096:54:1931:-131.614,0,-236.414	0/1:25:17,8:17:612:8:288:-18.7417,0,-47.8877	0/1:16:4,12:4:144:12:432:-34.4047,0,-8.49714	0/1:78:45,33:45:1616:33:1184:-83.388,0,-122.087	0/1:83:47,36:47:1680:36:1283:-90.7429,0,-126.499	0/1:68:36,32:36:1288:32:1152:-83.5201,0,-95.7442	0/1:33:20,13:20:716:13:468:-32.5257,0,-54.8314	0/1:23:17,6:17:608:6:216:-12.8668,0,-48.1236	0/1:66:32,34:32:1144:34:1211:-89.4275,0,-83.3945	0/0:45:45,0:45:1600:0:0:0,-13.5463,-144.181	0/0:27:27,0:27:963:0:0:0,-8.12781,-86.9826	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.083	0/0:57:57,0:57:2030:0:0:0,-17.1587,-182.946	0/1:10:7,3:7:252:3:108:-7.06487,0,-19.9112	0/0:13:13,0:13:459:0:0:0,-3.91339,-41.6441	0/1:17:10,7:10:356:7:252:-17.9114,0,-27.2327	0/1:52:20,32:20:720:32:1152:-88.3366,0,-49.4752	0/1:90:49,41:49:1748:41:1464:-104.952,0,-130.404	0/1:70:29,41:29:1032:41:1476:-112.064,0,-72.1181	0/1:68:45,23:45:1600:23:824:-54.0133,0,-123.806	0/1:32:22,10:22:788:10:356:-22.7483,0,-61.6118	0/1:35:18,17:18:636:17:599:-43.7018,0,-47.0296	0/0:146:146,0:146:5196:0:0:0,-43.9504,-467.365	0/0:151:151,0:151:5408:0:0:0,-45.4555,-486.435	0/1:18:12,6:12:424:6:216:-14.372,0,-33.0737	0/1:172:99,73:99:3532:73:2612:-183.481,0,-266.302	0/1:95:57,38:57:2044:38:1356:-93.7426,0,-155.62	0/0:79:79,0:79:2816:0:0:0,-23.7814,-253.671	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0928	0/1:32:16,16:16:572:16:576:-42.542,0,-42.1734	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:42:42,0:42:1496:0:0:0,-12.6433,-134.93	0/0:139:139,0:139:4929:0:0:0,-41.8432,-443.685	0/1:66:40,26:40:1436:26:936:-64.6915,0,-109.651	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1979	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/1:92:55,37:55:1964:37:1324:-91.7673,0,-149.328	0/1:24:11,13:11:383:13:468:-35.2349,0,-27.5762	0/1:84:45,39:45:1616:39:1396:-100.653,0,-120.441	0/1:19:9,10:9:324:10:356:-26.6617,0,-23.7839	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1482	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.962	0/0:66:66,0:66:2356:0:0:0,-19.868,-212.297	0/1:154:94,60:94:3368:60:2139:-146.387,0,-256.907	0/0:56:56,0:56:1989:0:0:0,-16.8577,-179.277	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.675	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.566	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/1:73:39,34:39:1384:34:1224:-88.4919,0,-102.833	0/1:45:30,15:30:1076:15:540:-35.3902,0,-83.6065	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.306	0/1:41:23,18:23:820:18:640:-45.5871,0,-61.7779	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/0:59:59,0:59:2104:0:0:0,-17.7608,-189.578	0/1:52:27,25:27:964:25:885:-64.3138,0,-71.3147	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:92:68,23:68:2428:23:820:-46.2995,0,-190.986	0/0:146:143,2:143:5112:2:72:0,-37.1723,-453.36	0/0:35:35,0:35:1247:0:0:0,-10.536,-112.534	0/0:82:81,1:81:2904:1:36:0,-21.0888,-257.994	0/1:112:68,44:68:2420:44:1561:-107.064,0,-184.336	0/0:129:129,0:129:4593:0:0:0,-38.8329,-413.522	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.294	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.265	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:87:59,28:59:2112:28:987:-62.9541,0,-164.033	0/0:44:44,0:44:1564:0:0:0,-13.2453,-141.044	0/0:135:135,0:135:4828:0:0:0,-40.639,-434.507	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.899	0/0:81:80,1:80:2860:1:36:0,-20.9027,-254.141	0/0:44:42,2:42:1473:2:72:0,-6.4086,-126.014	0/1:22:13,9:13:464:9:324:-22.8832,0,-35.4748	0/1:40:19,21:19:672:21:748:-55.6041,0,-48.7585	0/0:58:57,0:57:2028:0:0:0,-17.1587,-182.427	0/1:78:42,36:42:1488:36:1288:-92.7432,0,-110.734	0/0:37:37,0:37:1315:0:0:0,-11.1381,-118.648	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2701	0/1:27:13,14:13:451:14:495:-36.7552,0,-32.7849	0/1:50:24,26:24:860:26:936:-69.508,0,-62.6703	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:43:20,23:20:707:23:828:-61.8998,0,-51.0076	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.579	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/1:53:26,27:26:928:27:962:-70.4458,0,-67.8827	0/1:38:17,21:17:599:21:743:-55.7542,0,-42.799	0/0:39:38,0:38:1356:0:0:0,-11.4391,-121.978	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.094
chr10	1021436	.	GTTTGTAT	CTTCGTAC,CTTTGTAC	108768	PASS	AB=0.57544,0.4152;ABP=135.046,169.841;AC=139,49;AF=0.739362,0.260638;AN=188;AO=4075,1114;CIGAR=1X2M1X3M1X,1X6M1X;DP=5228;DPB=5228.5;DPRA=0,1.01319;EPP=8834.4,2413.35;EPPR=0;GTI=1;LEN=8,8;MEANALT=1.92553,2.44231;MQM=59.6869,59.9758;MQMR=0;NS=94;NUMALT=2;ODDS=2.05105;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=30,0;PQR=0;PRO=0;QA=142990,39446;QR=0;RO=0;RPL=4073,1113;RPP=8834.4,2413.35;RPPR=0;RPR=2,1;RUN=1,1;SAF=4075,1114;SAP=8851.76,2422.03;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:42:0,27,13:0:0:27,13:939,460:-113.907,-37.5542,-29.4264,-76.4346,0,-72.5212	1/1:64:0,62,0:0:0:62,0:2161,0:-194.501,-18.6639,0,-194.501,-18.6639,-194.501	1/2:87:0,55,30:0:0:55,30:1929,1071:-244.277,-87.3354,-70.7788,-156.96,0,-147.929	1/2:138:0,85,49:0:0:85,49:2983,1744:-384.922,-142.161,-116.573,-242.786,0,-228.035	1/2:25:0,17,8:0:0:17,8:604,288:-73.0741,-23.8592,-18.7417,-49.5732,0,-47.165	1/2:16:0,3,12:0:0:3,12:100,424:-42.6712,-34.58,-33.6769,-8.11908,0,-4.50672	1/2:75:0,43,30:0:0:43,30:1506,1057:-208.608,-86.0721,-73.1278,-122.551,0,-113.52	1/2:80:0,47,33:0:0:47,33:1643,1180:-230.228,-96.5741,-82.4256,-134.008,0,-124.074	1/2:68:0,36,32:0:0:36,32:1272,1124:-195.416,-91.8322,-80.9952,-103.936,0,-94.3027	1/2:34:0,21,13:0:0:21,13:733,445:-96.0856,-36.462,-30.1403,-59.9684,0,-56.055	1/2:22:0,17,5:0:0:17,5:607,180:-64.5271,-15.0469,-9.9294,-49.8393,0,-48.3342	1/2:64:0,32,32:0:0:32,32:1131,1114:-183.04,-90.9302,-81.2972,-92.4603,0,-82.8273	1/1:46:0,46,0:0:0:46,0:1626,0:-146.54,-13.8474,0,-146.54,-13.8474,-146.54	1/1:27:0,27,0:0:0:27,0:956,0:-86.3546,-8.12781,0,-86.3546,-8.12781,-86.3546	1/1:48:0,48,0:0:0:48,0:1709,0:-154.094,-14.4494,0,-154.094,-14.4494,-154.094	1/1:58:0,57,0:0:0:57,0:2006,0:-180.415,-17.1587,0,-180.415,-17.1587,-180.415	1/2:9:0,6,3:0:0:6,3:215,104:-26.3423,-8.79971,-6.99353,-17.893,0,-16.9899	1/1:13:0,13,0:0:0:13,0:454,0:-41.1923,-3.91339,0,-41.1923,-3.91339,-41.1923	1/2:17:0,10,7:0:0:10,7:354,252:-49.7227,-20.9217,-17.9114,-29.1582,0,-27.051	1/2:53:0,20,33:0:0:20,33:708,1180:-154.244,-96.5741,-90.5535,-58.0251,0,-48.0912	1/2:87:0,48,39:0:0:48,39:1657,1392:-248.451,-113.839,-99.3894,-134.964,0,-123.224	1/2:69:0,28,40:0:0:28,40:985,1400:-194.076,-113.894,-105.465,-80.1739,0,-68.1327	1/2:71:0,47,23:0:0:47,23:1642,816:-200.131,-66.5741,-52.4257,-133.645,0,-126.721	1/2:33:0,23,10:0:0:23,10:817,360:-96.3042,-29.734,-22.8103,-66.9286,0,-63.9183	1/2:37:0,19,18:0:0:19,18:676,628:-106.521,-51.4269,-45.7074,-55.4464,0,-50.0279	1/1:148:0,148,0:0:0:148,0:5166,0:-465.003,-44.5524,0,-465.003,-44.5524,-465.003	1/1:152:0,151,0:0:0:151,0:5349,0:-481.289,-45.4555,0,-481.289,-45.4555,-481.289	1/2:18:0,12,6:0:0:12,6:420,212:-51.7851,-17.6186,-14.0063,-34.5185,0,-32.7124	1/2:169:0,99,70:0:0:99,70:3454,2473:-482.666,-201.749,-171.947,-281.269,0,-260.197	1/2:97:0,61,36:0:0:61,36:2130,1284:-278.262,-105.026,-86.6635,-173.59,0,-162.753	1/1:79:0,79,0:0:0:79,0:2738,0:-246.658,-23.7814,0,-246.658,-23.7814,-246.658	1/1:13:0,13,0:0:0:13,0:460,0:-41.732,-3.91339,0,-41.732,-3.91339,-41.732	1/2:30:0,13,14:0:0:13,14:461,500:-78.3286,-40.7708,-36.8574,-37.5622,0,-33.3478	1/1:9:0,9,0:0:0:9,0:319,0:-29.0517,-2.70927,0,-29.0517,-2.70927,-29.0517	1/1:8:0,8,0:0:0:8,0:280,0:-25.5396,-2.40824,0,-25.5396,-2.40824,-25.5396	1/1:44:0,44,0:0:0:44,0:1497,0:-135.016,-13.2453,0,-135.016,-13.2453,-135.016	1/1:138:0,137,0:0:0:137,0:4834,0:-434.798,-41.2411,0,-434.798,-41.2411,-434.798	1/2:70:0,42,27:0:0:42,27:1462,957:-196.949,-78.0823,-65.439,-118.984,0,-110.856	1/1:26:0,26,0:0:0:26,0:921,0:-83.2062,-7.82678,0,-83.2062,-7.82678,-83.2062	1/2:8:0,2,6:0:0:2,6:72,201:-22.4919,-16.6109,-16.0088,-6.23466,0,-4.42848	1/2:91:0,55,36:0:0:55,36:1942,1296:-264.243,-106.107,-89.5502,-158.493,0,-147.656	1/2:23:0,11,12:0:0:11,12:384,432:-66.8353,-35.6088,-32.2975,-31.5806,0,-27.9683	1/2:82:0,45,37:0:0:45,37:1580,1307:-235.382,-106.793,-93.2463,-128.942,0,-117.803	1/2:19:0,9,9:0:0:9,9:321,324:-52.6013,-26.4368,-23.7275,-26.1632,0,-23.4539	1/1:30:0,30,0:0:0:30,0:1050,0:-94.8072,-9.0309,0,-94.8072,-9.0309,-94.8072	1/1:70:0,70,0:0:0:70,0:2459,0:-221.559,-21.0721,0,-221.559,-21.0721,-221.559	1/1:67:0,67,0:0:0:67,0:2295,0:-206.502,-20.169,0,-206.502,-20.169,-206.502	1/2:152:0,91,58:0:0:91,58:3196,2052:-427.257,-167.192,-139.799,-260.12,0,-242.661	1/1:57:0,57,0:0:0:57,0:1996,0:-179.909,-17.1587,0,-179.909,-17.1587,-179.909	1/1:50:0,50,0:0:0:50,0:1770,0:-159.577,-15.0515,0,-159.577,-15.0515,-159.577	1/1:72:0,72,0:0:0:72,0:2538,0:-228.67,-21.6742,0,-228.67,-21.6742,-228.67	1/2:9:0,2,7:0:0:2,7:72,252:-26.7966,-20.9217,-20.3197,-6.23466,0,-4.12745	1/2:71:0,39,32:0:0:39,32:1366,1118:-202.406,-91.2905,-79.5503,-111.465,0,-101.832	1/2:44:0,30,14:0:0:30,14:1057,504:-127.536,-41.4837,-32.4528,-86.4101,0,-82.1957	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:86:0,86,0:0:0:86,0:3029,0:-272.839,-25.8886,0,-272.839,-25.8886,-272.839	1/2:40:0,23,17:0:0:23,17:797,604:-114.344,-49.5731,-42.6494,-65.1225,0,-60.005	1/2:6:0,2,4:0:0:2,4:72,144:-17.9843,-12.1095,-11.5074,-6.23466,0,-5.03054	1/2:9:0,7,2:0:0:7,2:249,72:-26.524,-6.23466,-4.12745,-20.6482,0,-20.0462	1/1:59:0,57,0:0:0:57,0:1971,0:-177.398,-17.1587,0,-177.398,-17.1587,-177.398	1/2:52:0,26,26:0:0:26,26:926,928:-151.484,-76.0115,-68.1847,-75.829,0,-68.0022	1/1:6:0,6,0:0:0:6,0:213,0:-19.5163,-1.80618,0,-19.5163,-1.80618,-19.5163	1/2:93:0,71,21:0:0:71,21:2502,748:-264.676,-61.0052,-39.6321,-203.708,0,-197.386	1/1:148:0,145,2:0:0:145,2:5093,72:-458.141,-43.6494,0,-452.266,-37.7743,-451.664	1/1:34:0,34,0:0:0:34,0:1191,0:-107.495,-10.235,0,-107.495,-10.235,-107.495	1/1:87:0,87,0:0:0:87,0:3073,0:-276.794,-26.1896,0,-276.794,-26.1896,-276.794	1/2:111:0,70,39:0:0:70,39:2438,1376:-310.291,-112.053,-90.9811,-198.243,0,-186.503	1/1:130:0,128,0:0:0:128,0:4524,0:-407.033,-38.5318,0,-407.033,-38.5318,-407.033	1/1:9:0,9,0:0:0:9,0:310,0:-28.2337,-2.70927,0,-28.2337,-2.70927,-28.2337	1/1:63:0,63,0:0:0:63,0:2230,0:-200.96,-18.9649,0,-200.96,-18.9649,-200.96	1/1:33:0,33,0:0:0:33,0:1157,0:-104.435,-9.93399,0,-104.435,-9.93399,-104.435	1/1:12:0,12,0:0:0:12,0:424,0:-38.4966,-3.61236,0,-38.4966,-3.61236,-38.4966	1/2:86:0,60,26:0:0:60,26:2104,928:-247.17,-76.0115,-57.9497,-171.513,0,-163.686	1/1:46:0,45,1:0:0:45,1:1578,36:-141.942,-13.5464,0,-139.005,-10.2491,-138.704	1/1:139:0,139,0:0:0:139,0:4861,0:-437.56,-41.8432,0,-437.56,-41.8432,-437.56	1/1:92:0,92,0:0:0:92,0:3263,0:-293.857,-27.6948,0,-293.857,-27.6948,-293.857	1/1:84:0,84,0:0:0:84,0:2929,0:-263.73,-25.2865,0,-263.73,-25.2865,-263.73	1/1:44:0,41,2:0:0:41,2:1441,72:-129.646,-12.3422,0,-123.771,-6.4075,-123.169	1/2:23:0,13,10:0:0:13,10:457,338:-64.9426,-27.7356,-23.8222,-37.5507,0,-34.5404	1/2:41:0,20,20:0:0:20,20:675,708:-112.468,-57.7695,-51.7489,-54.7872,0,-48.7666	1/1:60:0,60,0:0:0:60,0:2083,0:-187.735,-18.0618,0,-187.735,-18.0618,-187.735	1/2:76:0,43,33:0:0:43,33:1498,1176:-218.029,-96.2138,-83.2695,-122.168,0,-112.234	1/1:36:0,36,0:0:0:36,0:1258,0:-113.521,-10.8371,0,-113.521,-10.8371,-113.521	1/1:30:0,30,0:0:0:30,0:1041,0:-93.9946,-9.0309,0,-93.9946,-9.0309,-93.9946	1/2:27:0,13,14:0:0:13,14:454,495:-77.5908,-40.6686,-36.7552,-37.2733,0,-33.0589	1/2:51:0,25,26:0:0:25,26:878,919:-146.658,-75.1994,-67.6736,-71.8104,0,-63.9836	1/1:9:0,9,0:0:0:9,0:320,0:-29.1426,-2.70927,0,-29.1426,-2.70927,-29.1426	1/2:43:0,20,23:0:0:20,23:703,812:-123.694,-66.4772,-60.4566,-57.5692,0,-50.6455	1/1:36:0,34,0:0:0:34,0:1193,0:-107.342,-10.235,0,-107.342,-10.235,-107.342	1/2:15:0,5,10:0:0:5,10:178,356:-43.8786,-29.3709,-27.8658,-14.8635,0,-11.8532	1/2:50:0,26,24:0:0:26,24:913,823:-141.469,-67.1569,-59.3301,-74.6585,0,-67.4338	1/2:38:0,18,20:0:0:18,20:638,708:-110.001,-58.025,-52.6065,-52.3305,0,-46.3099	1/1:40:0,40,0:0:0:40,0:1400,0:-126.293,-12.0412,0,-126.293,-12.0412,-126.293	1/1:50:0,49,0:0:0:49,0:1744,0:-156.944,-14.7505,0,-156.944,-14.7505,-156.944
chr10	1059869	.	TTAGG	TAAGA,AAAGA	111925	PASS	AB=0.638145,0.360516;ABP=992.936,1012.23;AC=138,50;AF=0.734043,0.265957;AN=188;AO=9333,2157;CIGAR=1M1X2M1X,2X2M1X;DP=11504;DPB=11504;DPRA=0,0.964855;EPP=20269.4,4686.88;EPPR=0;GTI=10;LEN=5,5;MEANALT=1.70213,2.17308;MQM=22.8734,22.9592;MQMR=0;NS=94;NUMALT=2;ODDS=1401.01;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=332200,76806;QR=0;RO=0;RPL=0,0;RPP=20269.4,4686.88;RPPR=0;RPR=9333,2157;RUN=1,1;SAF=9333,2157;SAP=20269.4,4686.88;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:102:0,43,59:0:0:43,59:1517,2094:-179.416,-104.228,-91.2836,-75.4162,0,-57.6554	1/1:112:0,112,0:0:0:112,0:3986,0:-230.826,-33.7154,0,-230.826,-33.7154,-230.826	1/2:199:0,162,37:0:0:162,37:5732,1313:-348.373,-64.8021,-16.0352,-283.798,0,-272.66	1/2:282:0,213,69:0:0:213,69:7539,2450:-492.992,-120.554,-56.4348,-372.665,0,-351.894	1/2:91:0,63,28:0:0:63,28:2240,994:-158.969,-48.9549,-29.99,-110.241,0,-101.812	1/2:61:0,36,25:0:0:36,25:1281,895:-107.229,-43.9489,-33.1118,-63.5087,0,-55.983	1/2:171:0,93,78:0:0:93,78:3334,2767:-298.879,-136.222,-108.226,-162.885,0,-139.405	1/2:159:0,110,47:0:0:110,47:3904,1652:-278.854,-82.1942,-49.0809,-196.668,0,-182.519	1/2:212:0,96,116:0:0:96,116:3411,4147:-372.491,-204.026,-175.127,-168.693,0,-133.774	1/2:120:0,79,41:0:0:79,41:2813,1443:-209.144,-71.4663,-47.6849,-137.905,0,-125.562	1/2:53:0,23,30:0:0:23,30:824,1060:-93.1089,-52.542,-45.6183,-40.7953,0,-31.7644	1/2:122:0,58,64:0:0:58,64:2060,2298:-215.169,-112.869,-95.4091,-102.53,0,-83.2638	1/1:70:0,70,0:0:0:70,0:2497,0:-144.886,-21.0721,0,-144.886,-21.0721,-144.886	1/1:56:0,56,0:0:0:56,0:1994,0:-114.905,-16.8577,0,-114.905,-16.8577,-114.905	1/1:81:0,81,0:0:0:81,0:2892,0:-166.024,-24.3834,0,-166.024,-24.3834,-166.024	1/1:52:0,52,0:0:0:52,0:1855,0:-106.903,-15.6536,0,-106.903,-15.6536,-106.903	1/2:34:0,22,12:0:0:22,12:791,427:-59.683,-21.1887,-14.566,-38.722,0,-35.1096	1/1:25:0,25,0:0:0:25,0:899,0:-51.6675,-7.52575,0,-51.6675,-7.52575,-51.6675	1/2:35:0,11,24:0:0:11,24:387,861:-61.5723,-42.3823,-39.071,-19.4177,0,-12.193	1/2:157:0,122,34:0:0:122,34:4310,1214:-271.962,-59.3563,-22.6306,-212.525,0,-202.29	1/2:171:0,127,44:0:0:127,44:4540,1560:-299.68,-77.5572,-39.3264,-222.351,0,-209.106	1/2:101:0,50,51:0:0:50,51:1779,1823:-168.414,-85.3543,-70.3028,-83.2784,0,-67.9259	1/2:130:0,84,46:0:0:84,46:3008,1637:-229.28,-80.9231,-55.6365,-148.586,0,-134.739	1/2:94:0,76,18:0:0:76,18:2708,638:-164.806,-31.8295,-8.95121,-133.205,0,-127.787	1/2:117:0,84,33:0:0:84,33:2979,1182:-206.16,-59.5619,-34.2754,-146.83,0,-136.896	1/1:342:0,341,0:0:0:341,0:12129,0:-670.311,-102.651,0,-670.311,-102.651,-670.311	1/1:390:0,390,0:0:0:390,0:13910,0:-800.717,-117.402,0,-800.717,-117.402,-800.717	1/2:33:0,16,16:0:0:16,16:569,569:-55.8151,-27.8752,-23.0587,-27.8557,0,-23.0392	1/2:254:0,182,72:0:0:182,72:6452,2565:-422.222,-119.774,-64.9865,-302.666,0,-280.992	1/2:123:0,82,41:0:0:82,41:2916,1457:-215.691,-71.9938,-47.3094,-143.925,0,-131.583	1/1:169:0,169,0:0:0:169,0:5970,0:-346.644,-50.8741,0,-346.644,-50.8741,-346.644	1/1:10:0,10,0:0:0:10,0:357,0:-20.7232,-3.0103,0,-20.7232,-3.0103,-20.7232	1/2:28:0,21,7:0:0:21,7:752,252:-49.3772,-12.4775,-6.1559,-37.1277,0,-35.0205	1/1:4:0,4,0:0:0:4,0:143,0:-8.59818,-1.20412,0,-8.59818,-1.20412,-8.59818	1/1:17:0,17,0:0:0:17,0:605,0:-35.2168,-5.11751,0,-35.2168,-5.11751,-35.2168	1/1:27:0,27,0:0:0:27,0:952,0:-55.7787,-8.12781,0,-55.7787,-8.12781,-55.7787	1/1:244:0,244,0:0:0:244,0:8690,0:-479.512,-73.4513,0,-479.512,-73.4513,-479.512	1/2:192:0,137,55:0:0:137,55:4867,1974:-339.345,-99.1915,-57.9504,-240.386,0,-223.829	1/1:60:0,59,0:0:0:59,0:2112,0:-121.335,-17.7608,0,-121.335,-17.7608,-121.335	1/2:9:0,3,6:0:0:3,6:104,212:-15.9269,-10.7043,-9.80124,-5.44962,0,-3.64344	1/2:137:0,95,42:0:0:95,42:3405,1503:-242.599,-73.673,-45.0752,-169.154,0,-156.511	1/2:28:0,18,10:0:0:18,10:648,359:-49.4629,-17.5493,-12.1308,-32.1411,0,-29.1308	1/2:226:0,141,85:0:0:141,85:4980,3041:-394.407,-149.028,-106.583,-245.606,0,-220.019	1/2:58:0,28,30:0:0:28,30:1000,1075:-101.785,-52.8483,-44.4194,-49.1649,0,-40.134	1/1:55:0,55,0:0:0:55,0:1968,0:-113.12,-16.5567,0,-113.12,-16.5567,-113.12	1/1:278:0,278,0:0:0:278,0:9926,0:-546.184,-83.6863,0,-546.184,-83.6863,-546.184	1/1:150:0,150,0:0:0:150,0:5364,0:-309.261,-45.1545,0,-309.261,-45.1545,-309.261	1/2:232:0,164,67:0:0:164,67:5835,2387:-403.752,-117.162,-67.7932,-286.509,0,-266.34	1/1:136:0,136,0:0:0:136,0:4844,0:-278.795,-40.9401,0,-278.795,-40.9401,-278.795	1/1:167:0,167,0:0:0:167,0:5941,0:-342.117,-50.272,0,-342.117,-50.272,-342.117	1/1:303:0,303,0:0:0:303,0:10785,0:-595.689,-91.2121,0,-595.689,-91.2121,-595.689	1/2:22:0,13,9:0:0:13,9:458,318:-38.5349,-15.925,-12.0116,-22.8369,0,-20.1276	1/2:119:0,80,39:0:0:80,39:2858,1378:-208.602,-68.7378,-44.6554,-140.092,0,-128.352	1/2:98:0,69,29:0:0:69,29:2464,1036:-163.548,-48.6038,-27.8327,-115.163,0,-106.433	1/2:42:0,21,20:0:0:21,20:742,709:-71.7585,-34.9507,-28.629,-36.718,0,-30.6974	1/1:237:0,237,0:0:0:237,0:8444,0:-487.222,-71.3441,0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chr10	1059890	.	TCGCACA	CTGCAAG,CTGCACG	106491	PASS	AB=0.642036,0.352891;ABP=1039.32,1114.67;AC=138,50;AF=0.734043,0.265957;AN=188;AO=9299,2092;CIGAR=2X3M2X,2X4M1X;DP=11446;DPB=11446;DPRA=0,1.05132;EPP=20195.5,4537.05;EPPR=0;GTI=10;LEN=7,7;MEANALT=2.02128,2.45283;MQM=22.8626,22.9407;MQMR=0;NS=94;NUMALT=2;ODDS=303.802;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=328688,47969;QR=0;RO=0;RPL=9299,2091;RPP=20195.5,4537.05;RPPR=0;RPR=0,1;RUN=1,1;SAF=9299,2092;SAP=20195.5,4545.73;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:100:0,41,56:0:0:41,56:1441,1292:-155.88,-84.2509,-71.9086,-71.5916,0,-54.7339	1/1:112:0,111,0:0:0:111,0:3934,0:-228.272,-33.4143,0,-228.272,-33.4143,-228.272	1/2:197:0,161,35:0:0:161,35:5635,801:-333.31,-52.0885,-3.62264,-281.208,0,-270.672	1/2:283:0,212,70:0:0:212,70:7447,1619:-475.288,-105.715,-41.897,-369.553,0,-348.481	1/2:89:0,63,26:0:0:63,26:2225,596:-148.859,-38.9944,-20.0295,-110.071,0,-102.245	1/2:60:0,36,24:0:0:36,24:1270,552:-99.4603,-36.1766,-25.3395,-63.4952,0,-56.2705	1/2:169:0,92,75:0:0:92,75:3288,1723:-273.101,-112.238,-84.5435,-160.866,0,-138.289	1/2:157:0,107,47:0:0:107,47:3753,1099:-259.423,-71.9586,-39.7484,-187.359,0,-173.211	1/2:208:0,96,111:0:0:96,111:3400,2565:-335.854,-167.471,-138.572,-168.399,0,-134.984	1/2:120:0,79,41:0:0:79,41:2782,941:-199.065,-61.5599,-37.7785,-137.714,0,-125.372	1/2:53:0,23,30:0:0:23,30:809,688:-85.5155,-45.0705,-38.1468,-40.6611,0,-31.6302	1/2:121:0,57,63:0:0:57,63:2019,1453:-194.32,-94.8201,-77.6614,-99.3976,0,-80.4327	1/1:70:0,70,0:0:0:70,0:2477,0:-144.533,-21.0721,0,-144.533,-21.0721,-144.533	1/1:56:0,55,0:0:0:55,0:1946,0:-112.543,-16.5567,0,-112.543,-16.5567,-112.543	1/1:81:0,80,0:0:0:80,0:2831,0:-163.469,-24.0824,0,-163.469,-24.0824,-163.469	1/1:52:0,52,0:0:0:52,0:1826,0:-106.548,-15.6536,0,-106.548,-15.6536,-106.548	1/2:34:0,22,12:0:0:22,12:790,276:-56.6956,-18.1883,-11.5656,-38.7172,0,-35.1048	1/1:25:0,25,0:0:0:25,0:888,0:-51.5906,-7.52575,0,-51.5906,-7.52575,-51.5906	1/2:35:0,11,24:0:0:11,24:375,552:-55.1674,-36.2565,-32.9452,-19.1277,0,-11.9029	1/2:157:0,122,34:0:0:122,34:4297,782:-264.453,-50.9453,-14.2196,-213.492,0,-203.257	1/2:172:0,128,44:0:0:128,44:4526,1018:-290.258,-66.6973,-28.1655,-223.769,0,-210.523	1/2:99:0,50,49:0:0:50,49:1769,1082:-152.561,-69.6047,-54.5532,-83.1602,0,-68.4097	1/2:128:0,82,44:0:0:82,44:2917,1016:-209.328,-66.2121,-41.5276,-143.021,0,-129.776	1/2:94:0,76,18:0:0:76,18:2698,416:-160.198,-27.3634,-4.48511,-133.041,0,-127.623	1/2:117:0,83,31:0:0:83,31:2933,713:-191.414,-46.3884,-21.4029,-144.952,0,-135.621	1/1:342:0,341,0:0:0:341,0:12015,0:-670.45,-102.651,0,-670.45,-102.651,-670.45	1/1:390:0,387,1:0:0:387,1:13684,35:-792.47,-116.499,0,-789.892,-113.89,-789.591	1/2:33:0,17,16:0:0:17,16:597,368:-54.7029,-24.1844,-19.0669,-30.7344,0,-25.9179	1/2:254:0,182,72:0:0:182,72:6406,1583:-403.771,-101.568,-46.7808,-302.4,0,-280.726	1/2:123:0,82,41:0:0:82,41:2911,945:-205.561,-61.8401,-37.1556,-143.931,0,-131.589	1/1:169:0,169,0:0:0:169,0:5927,0:-346.33,-50.8741,0,-346.33,-50.8741,-346.33	1/1:10:0,10,0:0:0:10,0:355,0:-20.7112,-3.0103,0,-20.7112,-3.0103,-20.7112	1/2:28:0,21,7:0:0:21,7:750,161:-47.5961,-10.6932,-4.37154,-37.1101,0,-35.0029	1/1:4:0,4,0:0:0:4,0:142,0:-8.58886,-1.20412,0,-8.58886,-1.20412,-8.58886	1/1:17:0,17,0:0:0:17,0:603,0:-35.2055,-5.11751,0,-35.2055,-5.11751,-35.2055	1/1:27:0,27,0:0:0:27,0:952,0:-55.8041,-8.12781,0,-55.8041,-8.12781,-55.8041	1/1:244:0,243,0:0:0:243,0:8590,0:-476.769,-73.1503,0,-476.769,-73.1503,-476.769	1/2:191:0,136,51:0:0:136,51:4807,1173:-313.701,-76.339,-35.399,-237.259,0,-221.906	1/1:60:0,60,0:0:0:60,0:2129,0:-124.368,-18.0618,0,-124.368,-18.0618,-124.368	1/2:9:0,3,6:0:0:3,6:107,138:-14.4485,-9.19415,-8.29106,-5.47278,0,-3.6666	1/2:135:0,92,40:0:0:92,40:3251,920:-220.601,-59.8496,-32.1549,-160.649,0,-148.608	1/2:28:0,18,10:0:0:18,10:641,228:-46.8887,-15.0088,-9.59028,-32.0894,0,-29.0791	1/2:223:0,141,82:0:0:141,82:4917,1888:-367.643,-123.3,-80.8546,-244.553,0,-219.869	1/2:58:0,28,30:0:0:28,30:992,692:-94.236,-45.3512,-36.9224,-49.0993,0,-40.0684	1/1:55:0,54,0:0:0:54,0:1909,0:-110.702,-16.2556,0,-110.702,-16.2556,-110.702	1/1:278:0,276,0:0:0:276,0:9754,0:-541.375,-83.0843,0,-541.375,-83.0843,-541.375	1/1:150:0,150,0:0:0:150,0:5288,0:-308.612,-45.1545,0,-308.612,-45.1545,-308.612	1/2:229:0,165,64:0:0:165,64:5845,1472:-385.14,-96.1375,-46.4676,-289.21,0,-269.945	1/1:136:0,136,0:0:0:136,0:4810,0:-278.6,-40.9401,0,-278.6,-40.9401,-278.6	1/1:167:0,167,0:0:0:167,0:5928,0:-342.072,-50.272,0,-342.072,-50.272,-342.072	1/1:303:0,303,0:0:0:303,0:10753,0:-595.436,-91.2121,0,-595.436,-91.2121,-595.436	1/2:22:0,13,9:0:0:13,9:462,207:-36.4202,-13.6912,-9.77783,-22.9402,0,-20.231	1/2:119:0,80,38:0:0:80,38:2833,880:-197.099,-57.5035,-33.4211,-139.605,0,-128.166	1/2:96:0,69,27:0:0:69,27:2449,596:-153.309,-38.4208,-17.6497,-115.086,0,-106.959	1/2:41:0,22,19:0:0:22,19:763,439:-67.9276,-28.8624,-22.2397,-39.2801,0,-33.5605	1/1:237:0,236,0:0:0:236,0:8341,0:-483.464,-71.0431,0,-483.464,-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chr10	1144510	.	G	T	60807.6	PASS	AB=0.531316;ABP=59.3162;AC=51;AF=0.271277;AN=188;AO=3520;CIGAR=1X;DP=12056;DPB=12056;DPRA=1.14914;EPP=7646.59;EPPR=18534.4;GTI=0;LEN=1;MEANALT=1.03571;MQM=59.3196;MQMR=59.9237;NS=94;NUMALT=1;ODDS=1.08824;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=126098;QR=304453;RO=8534;RPL=0;RPP=7646.59;RPPR=18534.4;RPR=3520;RUN=1;SAF=3520;SAP=7646.59;SAR=0;SRF=8534;SRP=18534.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:41:17,24:17:608:24:864:-65.7403,0,-42.7098	0/0:167:167,0:167:5924:0:0:0,-50.272,-533.268	0/1:134:62,72:62:2179:72:2584:-192.325,0,-156.033	0/1:236:114,122:114:4062:122:4347:-318.937,0,-294.72	0/1:99:57,42:57:2033:42:1495:-104.82,0,-153.394	0/1:64:31,33:31:1108:33:1184:-87.5264,0,-80.7651	0/1:191:102,89:102:3581:89:3196:-230.351,0,-264.997	0/1:176:89,87:89:3149:87:3132:-229.025,0,-230.652	0/1:86:41,45:41:1453:45:1616:-119.779,0,-105.175	0/1:127:70,57:70:2486:57:2031:-144.805,0,-185.757	0/1:132:60,72:60:2137:72:2575:-192.212,0,-152.86	0/1:83:45,38:45:1601:38:1364:-97.9951,0,-119.384	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/0:170:170,0:170:6100:0:0:0,-51.1751,-548.339	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.765	0/0:73:73,0:73:2593:0:0:0,-21.9752,-233.618	0/1:106:49,57:49:1764:57:2044:-151.996,0,-127.135	0/0:59:59,0:59:2101:0:0:0,-17.7608,-189.34	0/1:65:34,31:34:1216:31:1103:-79.9412,0,-90.175	0/1:279:117,162:117:4171:162:5818:-439.053,0,-291.584	0/1:198:87,111:87:3094:111:3992:-298.841,0,-219.077	0/1:191:69,122:69:2442:122:4371:-334.584,0,-162.535	0/1:45:18,27:18:648:27:968:-73.8736,0,-45.1055	0/1:118:57,61:57:2007:61:2188:-161.603,0,-145.376	0/1:115:36,79:36:1292:79:2820:-219.202,0,-81.9653	0/0:410:410,0:410:14647:0:0:0,-123.422,-1317.96	0/0:252:252,0:252:8957:0:0:0,-75.8596,-806.111	0/1:34:13,21:13:468:21:748:-57.4103,0,-32.2246	0/1:392:207,185:207:7380:185:6619:-476.647,0,-546.219	0/1:182:87,95:87:3113:95:3412:-251.835,0,-224.666	0/0:162:162,0:162:5760:0:0:0,-48.7669,-518.512	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:11:7,4:7:248:4:144:-10.0023,0,-19.3529	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:14:14,0:14:496:0:0:0,-4.21442,-44.9743	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/0:215:215,0:215:7648:0:0:0,-64.7214,-688.352	0/1:289:122,167:122:4350:167:5986:-451.538,0,-304.675	0/0:102:102,0:102:3660:0:0:0,-30.7051,-329.233	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:206:79,127:79:2832:127:4547:-347.346,0,-193.106	0/1:63:32,31:32:1137:31:1116:-81.7382,0,-83.6721	0/1:203:90,113:90:3209:113:4047:-303.303,0,-227.905	0/1:61:30,31:30:1072:31:1116:-82.3843,0,-78.4273	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.281	0/0:95:94,1:94:3376:1:36:0,-24.9996,-299.962	0/0:125:125,0:125:4458:0:0:0,-37.6287,-401.388	0/1:281:138,143:138:4930:143:5140:-378.026,0,-358.632	0/0:154:154,0:154:5498:0:0:0,-46.3586,-494.942	0/0:214:214,0:214:7665:0:0:0,-64.4204,-689.881	0/0:213:213,0:213:7629:0:0:0,-64.1194,-686.642	0/1:12:7,5:7:248:5:180:-12.9397,0,-19.0518	0/1:232:116,116:116:4153:116:4168:-304.903,0,-304.112	0/1:63:32,31:32:1114:31:1100:-79.5068,0,-81.5981	0/1:17:6,11:6:216:11:392:-30.5007,0,-14.673	0/0:139:139,0:139:4913:0:0:0,-41.8432,-442.309	0/1:14:4,10:4:144:10:360:-28.5283,0,-9.0992	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:31:11,20:11:396:20:720:-55.7945,0,-26.6462	0/0:159:159,0:159:5685:0:0:0,-47.8638,-511.768	0/1:200:92,108:92:3285:108:3884:-289.449,0,-235.662	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:257:123,134:123:4378:134:4778:-352.522,0,-316.828	0/0:285:284,1:284:10136:1:36:0,-82.1953,-908.569	0/0:120:120,0:120:4255:0:0:0,-36.1236,-382.636	0/0:90:90,0:90:3201:0:0:0,-27.0927,-288.226	0/1:180:89,90:89:3132:90:3211:-235.101,0,-228.003	0/0:204:201,3:201:7224:3:108:0,-51.3349,-640.03	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/0:96:96,0:96:3406:0:0:0,-28.8989,-306.753	0/0:127:127,0:127:4522:0:0:0,-38.2308,-407.146	0/0:49:49,0:49:1748:0:0:0,-14.7505,-157.604	0/1:186:87,99:87:3101:99:3556:-264.167,0,-223.135	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.993	0/0:265:263,2:263:9410:2:72:0,-72.9474,-839.986	0/0:178:178,0:178:6392:0:0:0,-53.5833,-575.366	0/0:251:251,0:251:8962:0:0:0,-75.5585,-806.527	0/0:108:108,0:108:3872:0:0:0,-32.5112,-348.664	0/1:10:3,7:3:108:7:252:-20.0187,0,-7.06487	0/1:136:55,81:55:1942:81:2908:-220.853,0,-134.112	0/0:126:126,0:126:4479:0:0:0,-37.9298,-403.259	0/1:300:148,152:148:5301:152:5443:-399.634,0,-386.914	0/0:121:120,1:120:4285:1:36:0,-32.8264,-382.226	0/0:81:81,0:81:2900:0:0:0,-24.3834,-261.236	0/1:84:37,46:37:1320:46:1648:-123.295,0,-93.7956	0/1:133:66,67:66:2359:67:2404:-176.362,0,-172.526	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.087	0/1:97:54,43:54:1936:43:1519:-107.723,0,-145.316	0/1:85:43,42:43:1540:42:1512:-110.755,0,-113.306	0/1:108:47,61:47:1692:61:2184:-164.125,0,-120.056	0/1:169:90,79:90:3202:79:2821:-202.212,0,-237.527	0/1:77:22,55:22:788:55:1951:-151.723,0,-48.0655	0/0:142:142,0:142:5066:0:0:0,-42.7463,-456.077	0/0:95:95,0:95:3408:0:0:0,-28.5978,-306.929
chr10	1190932	.	C	T	31768.5	PASS	AB=0.50081;ABP=3.0314;AC=49;AF=0.260638;AN=188;AO=1861;CIGAR=1X;DP=6948;DPB=6948;DPRA=1.11726;EPP=3966.33;EPPR=10745;GTI=0;LEN=1;MEANALT=1.07407;MQM=59.9871;MQMR=59.989;NS=94;NUMALT=1;ODDS=3.82903;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66631;QR=181288;RO=5078;RPL=1852;RPP=3966.33;RPPR=10745;RPR=9;RUN=1;SAF=0;SAP=4044.12;SAR=1861;SRF=0;SRP=11029.7;SRR=5078;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:46:19,27:19:675:27:968:-73.59,0,-47.2296	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/1:67:25,42:25:883:42:1503:-115.395,0,-59.6184	0/1:134:61,73:61:2188:73:2604:-194.271,0,-156.848	0/1:72:43,29:43:1500:29:1040:-72.2402,0,-113.616	0/1:66:27,39:27:972:39:1400:-106.431,0,-67.9299	0/1:47:21,26:21:752:26:936:-70.4111,0,-53.8578	0/1:137:83,54:83:2975:54:1929:-132.644,0,-226.741	0/1:84:35,49:35:1260:49:1756:-133.037,0,-88.419	0/1:52:26,26:26:932:26:932:-68.5453,0,-68.5453	0/1:62:33,29:33:1167:29:1040:-75.2505,0,-86.6725	0/1:115:70,45:70:2482:45:1597:-109.399,0,-189.015	0/0:90:90,0:90:3201:0:0:0,-27.0927,-288.313	0/0:46:45,0:45:1611:0:0:0,-13.5463,-144.92	0/0:79:79,0:79:2820:0:0:0,-23.7814,-254.04	0/0:45:45,0:45:1594:0:0:0,-13.5463,-143.749	0/1:26:10,16:10:360:16:576:-44.3482,0,-24.9175	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/1:34:15,19:15:536:19:680:-51.2941,0,-38.3398	0/1:83:45,38:45:1607:38:1360:-97.7151,0,-119.934	0/1:112:49,63:49:1744:63:2256:-169.588,0,-123.529	0/1:66:18,48:18:648:48:1720:-135.218,0,-38.7839	0/1:76:31,41:31:1108:41:1467:-110.292,0,-77.9973	0/1:20:11,9:11:396:9:324:-23.4853,0,-29.9621	0/1:80:51,28:51:1819:28:1004:-66.5347,0,-139.849	0/0:146:146,0:146:5220:0:0:0,-43.9504,-469.939	0/0:194:192,1:192:6863:1:36:0,-54.8603,-614.142	0/1:32:15,17:15:540:17:604:-45.0576,0,-39.3036	0/1:167:90,77:90:3236:77:2745:-197.019,0,-241.189	0/1:98:52,46:52:1860:46:1652:-119.468,0,-138.179	0/0:67:67,0:67:2364:0:0:0,-20.169,-213.017	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/0:156:156,0:156:5600:0:0:0,-46.9607,-504.12	0/1:81:40,41:40:1414:41:1464:-107.673,0,-103.172	0/0:53:53,0:53:1891:0:0:0,-15.9546,-170.468	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/1:112:55,57:55:1976:57:2040:-150.156,0,-144.399	0/1:47:27,20:27:968:20:720:-50.9804,0,-73.289	0/1:163:98,65:98:3468:65:2321:-160.081,0,-263.265	0/1:53:22,31:22:784:31:1104:-83.716,0,-54.9293	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.713	0/0:164:164,0:164:5840:0:0:0,-49.3689,-525.714	0/1:112:56,56:56:1997:56:2012:-147.638,0,-146.287	0/0:90:90,0:90:3232:0:0:0,-27.0927,-291.101	0/0:88:88,0:88:3137:0:0:0,-26.4906,-282.555	0/0:118:118,0:118:4227:0:0:0,-35.5215,-380.479	0/1:10:8,2:8:284:2:72:-3.82642,0,-22.8931	0/1:95:45,50:45:1607:50:1796:-133.324,0,-116.322	0/0:56:56,0:56:2003:0:0:0,-16.8577,-180.543	0/1:18:5,13:5:171:13:468:-37.0411,0,-10.3069	0/0:92:91,1:91:3255:1:36:0,-24.0965,-289.572	0/1:37:14,23:14:491:23:828:-63.706,0,-33.383	0/0:13:12,1:12:417:1:36:0,-0.315115,-34.2619	0/1:18:14,4:14:504:4:140:-7.52604,0,-40.2796	0/0:60:60,0:60:2148:0:0:0,-18.0618,-193.587	0/1:93:51,42:51:1832:42:1508:-108.019,0,-137.165	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:147:86,61:86:3065:61:2196:-153.631,0,-231.827	0/0:125:125,0:125:4484:0:0:0,-37.6287,-403.728	0/0:49:49,0:49:1748:0:0:0,-14.7505,-157.604	0/0:46:46,0:46:1639:0:0:0,-13.8474,-147.798	0/1:105:53,52:53:1900:52:1872:-137.151,0,-139.67	0/0:132:132,0:132:4698:0:0:0,-39.736,-422.979	0/0:58:56,2:56:2004:2:72:0,-10.623,-173.797	0/0:20:20,0:20:720:0:0:0,-6.0206,-65.1288	0/0:36:36,0:36:1278:0:0:0,-10.8371,-115.322	0/0:18:18,0:18:639:0:0:0,-5.41854,-57.8382	0/1:161:93,68:93:3308:68:2410:-168.689,0,-249.475	0/0:116:116,0:116:4139:0:0:0,-34.9195,-372.694	0/0:85:85,0:85:3044:0:0:0,-25.5875,-274.189	0/0:165:165,0:165:5899:0:0:0,-49.6699,-531.02	0/0:117:116,1:116:4135:1:36:0,-31.6222,-368.737	0/0:70:70,0:70:2487:0:0:0,-21.0721,-223.814	0/1:11:3,8:3:108:8:273:-21.5897,0,-6.76384	0/1:69:33,36:33:1171:36:1296:-96.1729,0,-84.9256	0/0:86:85,0:85:3042:0:0:0,-25.5875,-273.649	0/1:152:65,87:65:2302:87:3122:-235.449,0,-161.684	0/0:51:51,0:51:1823:0:0:0,-15.3525,-164.333	0/0:66:66,0:66:2352:0:0:0,-19.868,-211.939	0/1:42:19,23:19:680:23:824:-61.8401,0,-48.8859	0/1:115:58,56:58:2072:56:2012:-146.807,0,-152.204	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:53:30,23:30:1068:23:819:-58.0776,0,-80.4775	0/1:64:27,37:27:964:37:1320:-99.836,0,-67.8109	0/1:49:19,30:19:684:30:1076:-82.4024,0,-47.1399	0/1:130:58,72:58:2061:72:2586:-193.855,0,-146.626	0/1:63:22,41:22:788:41:1467:-113.338,0,-52.2799	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.592	0/0:79:79,0:79:2803:0:0:0,-23.7814,-252.511
chr10	1276837	.	A	G	111106	PASS	AB=0.477691;ABP=23.4535;AC=138;AF=0.734043;AN=188;AO=5558;CIGAR=1X;DP=8036;DPB=8036;DPRA=0;EPP=11804.3;EPPR=5282.28;GTI=1;LEN=1;MEANALT=1.03191;MQM=59.9629;MQMR=59.9172;NS=94;NUMALT=1;ODDS=0.944716;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=194116;QR=88030;RO=2475;RPL=31;RPP=11804.3;RPPR=5282.28;RPR=5527;RUN=1;SAF=0;SAP=12072.1;SAR=5558;SRF=0;SRP=5377.4;SRR=2475;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:21,29:21:732:29:1014:-76.159,0,-50.7876	1/1:105:2,103:2:72:103:3619:-319.082,-24.7714,0	0/1:188:101,87:101:3604:87:3028:-216.16,0,-267.776	0/1:193:93,100:93:3297:100:3494:-256.575,0,-238.849	0/1:68:37,31:37:1315:31:1095:-78.3891,0,-98.181	0/1:66:42,24:42:1495:24:852:-57.1242,0,-114.976	0/1:82:40,42:40:1436:42:1435:-104.756,0,-104.853	0/1:110:54,56:54:1914:56:1958:-143.379,0,-139.423	0/1:92:66,26:66:2355:26:916:-55.0617,0,-183.117	0/1:76:44,32:44:1561:32:1127:-78.8592,0,-117.899	0/1:44:24,20:24:860:20:673:-47.6387,0,-64.4765	0/1:73:34,39:34:1211:39:1360:-100.723,0,-87.3203	1/1:55:0,55:0:0:55:1952:-175.956,-16.5567,0	1/1:48:0,48:0:0:48:1638:-147.7,-14.4494,0	1/1:52:0,52:0:0:52:1800:-162.276,-15.6536,0	1/1:34:0,34:0:0:34:1191:-107.494,-10.235,0	0/1:58:25,33:25:892:33:1172:-88.3278,0,-63.1399	1/1:34:0,34:0:0:34:1196:-107.945,-10.235,0	0/1:31:18,13:18:631:13:446:-31.1345,0,-47.7838	0/1:177:80,97:80:2864:97:3435:-256.082,0,-204.627	0/1:129:65,64:65:2319:64:2228:-161.951,0,-170.109	0/1:206:138,68:138:4915:68:2372:-151.723,0,-380.491	0/1:91:38,53:38:1364:53:1856:-139.881,0,-95.667	0/1:68:33,35:33:1153:35:1197:-87.5557,0,-83.6041	0/1:63:26,37:26:936:37:1295:-97.8854,0,-65.5946	1/1:213:0,213:0:0:213:7337:-660.398,-64.1194,0	1/1:139:1,138:1:36:138:4823:-430.62,-38.2449,0	0/1:40:22,18:22:772:18:627:-44.7132,0,-57.7601	0/1:173:96,77:96:3440:77:2725:-193.415,0,-257.735	0/1:210:100,110:100:3564:110:3882:-286.362,0,-257.753	1/1:81:0,81:0:0:81:2826:-254.58,-24.3834,0	1/1:25:0,25:0:0:25:884:-79.8784,-7.52575,0	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	1/1:9:0,9:0:0:9:311:-28.3237,-2.70927,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:8:0,8:0:0:8:269:-24.5361,-2.40824,0	1/1:149:0,149:0:0:149:5210:-469.047,-44.8535,0	0/1:152:91,61:91:3219:61:2176:-150.35,0,-244.172	1/1:38:1,37:1:36:37:1286:-112.441,-7.84087,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:158:86,72:86:3050:72:2505:-178.137,0,-227.165	0/1:43:12,31:12:432:31:1069:-83.5713,0,-26.2769	0/1:161:92,69:92:3276:69:2422:-169.771,0,-246.596	0/1:47:26,21:26:923:21:735:-52.323,0,-69.2337	1/1:50:0,50:0:0:50:1746:-157.423,-15.0515,0	1/1:80:0,80:0:0:80:2819:-253.948,-24.0824,0	1/1:133:1,131:1:36:131:4584:-409.13,-36.4975,0	0/1:153:69,84:69:2449:84:2916:-216.587,0,-174.606	1/1:90:0,90:0:0:90:3114:-280.489,-27.0927,0	1/1:99:0,99:0:0:99:3441:-309.906,-29.802,0	1/1:146:0,146:0:0:146:5052:-454.836,-43.9504,0	0/1:13:5,8:5:180:8:279:-21.5341,0,-12.6387	0/1:170:91,79:91:3204:79:2793:-200.435,0,-237.41	1/1:52:0,52:0:0:52:1789:-161.288,-15.6536,0	0/1:14:3,11:3:108:11:396:-31.7683,0,-5.86075	1/1:128:0,128:0:0:128:4446:-400.309,-38.5318,0	0/1:66:29,37:29:1025:37:1298:-97.2517,0,-72.6904	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/1:17:9,8:9:324:8:275:-19.9651,0,-24.3883	1/1:35:0,35:0:0:35:1243:-112.174,-10.5361,0	0/1:104:58,46:58:2059:46:1597:-112.71,0,-154.274	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:183:85,97:85:3040:97:3398:-250.89,0,-218.683	1/1:170:1,169:1:36:169:5944:-531.475,-47.5768,0	1/1:43:0,43:0:0:43:1511:-136.282,-12.9443,0	1/1:80:0,80:0:0:80:2809:-253.051,-24.0824,0	0/1:220:132,88:132:4676:88:3085:-211.652,0,-354.777	1/1:99:0,99:0:0:99:3429:-308.779,-29.802,0	1/1:15:0,15:0:0:15:524:-47.4887,-4.51545,0	1/1:54:0,54:0:0:54:1858:-167.496,-16.2556,0	1/1:61:0,61:0:0:61:2153:-194.036,-18.3628,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:105:50,55:50:1800:55:1910:-140.566,0,-130.674	1/1:60:0,60:0:0:60:2115:-190.583,-18.0618,0	1/1:122:0,122:0:0:122:4232:-381.063,-36.7257,0	1/1:143:0,143:0:0:143:5048:-454.472,-43.0473,0	1/1:103:1,102:1:36:102:3580:-318.813,-27.4078,0	1/1:79:0,79:0:0:79:2762:-248.822,-23.7814,0	0/1:16:7,9:7:252:9:309:-23.3242,0,-18.2125	0/1:153:91,62:91:3242:62:2176:-150.047,0,-245.931	1/1:111:0,111:0:0:111:3864:-347.958,-33.4143,0	0/1:189:91,98:91:3233:98:3409:-250.132,0,-234.297	1/1:96:0,96:0:0:96:3326:-299.557,-28.8989,0	1/1:47:0,47:0:0:47:1649:-148.696,-14.1484,0	0/1:75:38,37:38:1356:37:1263:-91.3891,0,-99.7632	0/1:105:49,56:49:1725:56:1973:-146.236,0,-123.917	1/1:29:0,29:0:0:29:997:-90.0374,-8.72987,0	0/1:67:36,31:36:1257:31:1091:-78.3297,0,-93.261	0/1:48:28,20:28:999:20:708:-49.5962,0,-75.7751	0/1:28:14,14:14:500:14:496:-36.5454,0,-36.9073	0/1:73:33,40:33:1180:40:1398:-104.14,0,-84.5329	0/1:55:32,23:32:1135:23:781:-54.0433,0,-85.9014	1/1:72:0,72:0:0:72:2494:-224.71,-21.6742,0	1/1:85:0,85:0:0:85:2948:-265.555,-25.5876,0
chr10	1276865	.	G	A	42028.2	PASS	AB=0.518409;ABP=17.0017;AC=50;AF=0.265957;AN=188;AO=2470;CIGAR=1X;DP=8142;DPB=8142;DPRA=1.40417;EPP=5357.86;EPPR=12284.9;GTI=1;LEN=1;MEANALT=1.03636;MQM=59.9113;MQMR=59.9628;NS=94;NUMALT=1;ODDS=2.19815;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=88259;QR=202537;RO=5668;RPL=1;RPP=5357.86;RPPR=12284.9;RPR=2469;RUN=1;SAF=0;SAP=5366.55;SAR=2470;SRF=0;SRP=12310.9;SRR=5668;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:51:30,21:30:1068:21:752:-52.6455,0,-81.0795	0/0:110:108,2:108:3876:2:72:0,-26.2766,-342.197	0/1:189:90,99:90:3223:99:3535:-261.393,0,-233.397	0/1:191:101,90:101:3620:90:3228:-233.244,0,-268.508	0/1:65:29,36:29:1032:36:1283:-96.1972,0,-73.6265	0/1:61:21,40:21:756:40:1414:-109.192,0,-50.0044	0/1:83:43,40:43:1536:40:1432:-104.192,0,-113.548	0/1:117:61,56:61:2180:56:2012:-146.133,0,-161.246	0/1:96:29,67:29:1027:67:2404:-187.353,0,-63.7983	0/1:75:31,44:31:1116:44:1580:-119.914,0,-78.1744	0/1:43:19,24:19:680:24:864:-65.1383,0,-48.5849	0/1:74:40,34:40:1423:34:1224:-88.1908,0,-106.09	0/0:59:59,0:59:2111:0:0:0,-17.7608,-190.258	0/0:49:49,0:49:1702:0:0:0,-14.7505,-153.458	0/0:55:55,0:55:1950:0:0:0,-16.5566,-175.775	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.386	0/1:58:33,25:33:1179:25:900:-63.8613,0,-88.9575	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/1:32:14,18:14:485:18:644:-48.6576,0,-34.344	0/1:178:99,78:99:3537:78:2796:-198.374,0,-265.034	0/1:131:67,64:67:2387:64:2285:-166.447,0,-175.652	0/1:201:63,138:63:2260:138:4944:-384.602,0,-143.156	0/1:94:54,40:54:1936:40:1440:-101.599,0,-146.175	0/1:69:35,34:35:1240:34:1211:-88.5244,0,-91.1148	0/1:65:38,27:38:1348:27:972:-68.231,0,-102.053	0/0:217:215,0:215:7662:0:0:0,-64.7214,-689.326	0/0:139:138,1:138:4946:1:36:0,-38.2449,-441.676	0/1:39:17,22:17:612:22:792:-59.8655,0,-43.6733	0/1:170:77,93:77:2755:93:3335:-249.191,0,-197.016	0/1:213:115,98:115:4106:98:3527:-253.519,0,-305.577	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.713	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:150:150,0:150:5318:0:0:0,-45.1545,-478.754	0/1:149:61,88:61:2192:88:3145:-238.419,0,-152.692	0/0:39:39,0:39:1389:0:0:0,-11.7402,-125.307	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:161:71,90:71:2556:90:3231:-242.415,0,-181.824	0/1:44:32,12:32:1139:12:423:-25.1597,0,-89.5731	0/1:160:72,88:72:2576:88:3156:-236.1,0,-183.925	0/1:47:21,26:21:752:26:927:-69.5943,0,-53.8578	0/0:54:54,0:54:1925:0:0:0,-16.2556,-173.525	0/0:80:80,0:80:2857:0:0:0,-24.0824,-257.365	0/0:139:138,1:138:4921:1:36:0,-38.2449,-439.443	0/1:151:80,70:80:2860:70:2516:-181.177,0,-211.934	0/0:89:89,0:89:3187:0:0:0,-26.7917,-287.053	0/0:103:103,0:103:3691:0:0:0,-31.0061,-332.391	0/0:151:151,0:151:5400:0:0:0,-45.4555,-486.131	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	0/1:170:78,92:78:2796:92:3285:-244.664,0,-200.705	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/1:17:14,3:14:504:3:108:-4.95766,0,-40.5806	0/0:138:138,0:138:4939:0:0:0,-41.5421,-444.627	0/1:67:40,27:40:1436:27:968:-67.2684,0,-109.369	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:17:8,9:8:288:9:324:-24.3883,0,-21.149	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/1:106:50,56:50:1796:56:1966:-145.302,0,-130.013	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:184:99,85:99:3539:85:3052:-219.519,0,-263.329	0/0:163:162,1:162:5776:1:36:0,-45.4696,-516.357	0/0:42:42,0:42:1503:0:0:0,-12.6433,-135.564	0/0:82:82,0:82:2924:0:0:0,-24.6845,-263.396	0/1:225:89,136:89:3157:136:4795:-363.974,0,-216.623	0/0:101:101,0:101:3619:0:0:0,-30.404,-325.401	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:59:59,0:59:2108:0:0:0,-17.7608,-189.989	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:107:55,52:55:1959:52:1859:-135.379,0,-144.375	0/0:62:62,0:62:2220:0:0:0,-18.6639,-200.064	0/0:127:127,0:127:4546:0:0:0,-38.2308,-409.26	0/0:145:145,0:145:5212:0:0:0,-43.6493,-469.216	0/0:106:105,1:105:3764:1:36:0,-28.3109,-335.361	0/0:80:80,0:80:2856:0:0:0,-24.0824,-257.278	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	0/1:153:60,93:60:2144:93:3319:-252.865,0,-147.17	0/0:116:116,0:116:4143:0:0:0,-34.9195,-373.054	0/1:193:98,95:98:3503:95:3385:-246.737,0,-257.381	0/0:99:99,0:99:3537:0:0:0,-29.802,-318.493	0/0:54:54,0:54:1911:0:0:0,-16.2556,-172.264	0/1:73:37,36:37:1324:36:1296:-94.9687,0,-97.4869	0/1:105:57,48:57:2035:48:1716:-123.116,0,-151.813	0/0:30:30,0:30:1063:0:0:0,-9.0309,-95.9808	0/1:71:33,38:33:1169:38:1315:-97.2708,0,-84.1422	0/1:49:20,29:20:712:29:1044:-79.5243,0,-49.6562	0/1:28:14,14:14:504:14:487:-35.7304,0,-37.2693	0/1:75:41,34:41:1472:34:1200:-85.7265,0,-110.199	0/1:53:23,30:23:820:30:1052:-79.0331,0,-58.1679	0/0:70:70,0:70:2493:0:0:0,-21.0721,-224.622	0/0:86:86,0:86:3073:0:0:0,-25.8886,-276.797
chr10	1276868	.	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chr10	1483302	.	T	C	59179.9	PASS	AB=0.537679;ABP=80.5743;AC=51;AF=0.271277;AN=188;AO=3396;CIGAR=1X;DP=11163;DPB=11163;DPRA=1.17001;EPP=7247.62;EPPR=16564;GTI=1;LEN=1;MEANALT=1.06452;MQM=59.9856;MQMR=59.9987;NS=94;NUMALT=1;ODDS=1.71258;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=121134;QR=277128;RO=7762;RPL=3381;RPP=7247.62;RPPR=16581.2;RPR=15;RUN=1;SAF=0;SAP=7377.33;SAR=3396;SRF=2;SRP=16840.6;SRR=7760;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:25,33:25:892:33:1165:-87.6953,0,-63.1399	0/0:99:99,0:99:3544:0:0:0,-29.802,-319.169	0/1:189:102,87:102:3648:87:3097:-222.062,0,-271.63	0/1:249:108,141:108:3856:141:5015:-376.538,0,-272.28	0/1:93:49,44:49:1741:44:1531:-110.08,0,-128.977	0/1:45:16,29:16:576:29:1044:-80.7285,0,-38.6286	0/1:144:68,75:68:2440:75:2668:-197.105,0,-176.596	0/1:214:98,116:98:3508:116:4126:-307.103,0,-251.51	0/1:136:57,79:57:2017:79:2818:-212.919,0,-140.861	0/1:114:59,55:59:2097:55:1965:-142.807,0,-154.681	0/1:118:48,70:48:1724:70:2505:-190.181,0,-119.924	0/1:99:46,53:46:1652:53:1889:-140.484,0,-119.167	0/0:92:92,0:92:3284:0:0:0,-27.6948,-295.78	0/0:108:108,0:108:3867:0:0:0,-32.5112,-348.224	0/0:87:87,0:87:3089:0:0:0,-26.1896,-278.238	0/0:56:56,0:56:2004:0:0:0,-16.8577,-180.634	0/1:89:40,49:40:1436:49:1738:-129.88,0,-102.746	0/0:80:80,0:80:2864:0:0:0,-24.0824,-257.997	0/1:73:30,42:30:1076:42:1502:-113.586,0,-75.2639	0/1:193:80,113:80:2845:113:4037:-305.418,0,-198.189	0/1:170:82,88:82:2913:88:3145:-232.099,0,-211.23	0/1:73:11,62:11:396:62:2192:-175.568,0,-14.0076	0/1:114:61,53:61:2184:53:1904:-137.32,0,-162.509	0/1:133:53,80:53:1881:80:2864:-217.96,0,-129.53	0/1:106:64,42:64:2300:42:1493:-102.753,0,-175.352	0/0:353:353,0:353:12609:0:0:0,-106.264,-1134.64	0/0:246:246,0:246:8809:0:0:0,-74.0534,-792.795	0/1:34:20,14:20:720:14:504:-35.4631,0,-54.8938	0/1:333:148,184:148:5316:184:6559:-490.089,0,-378.27	0/1:130:71,59:71:2552:59:2098:-149.955,0,-190.796	0/0:156:154,2:154:5482:2:72:0,-40.124,-486.67	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:39:23,16:23:820:16:568:-39.7117,0,-62.3823	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/0:184:184,0:184:6592:0:0:0,-55.3895,-593.36	0/1:193:88,104:88:3156:104:3700:-275.042,0,-226.107	0/0:117:117,0:117:4154:0:0:0,-35.2205,-374.043	0/1:11:6,5:6:204:5:180:-13.2407,0,-15.382	0/1:201:86,115:86:3080:115:4117:-310.206,0,-216.921	0/1:69:31,38:31:1108:38:1364:-102.29,0,-79.2599	0/1:145:64,81:64:2280:81:2891:-216.777,0,-161.813	0/1:118:53,65:53:1904:65:2313:-172.908,0,-136.116	0/0:84:84,0:84:3016:0:0:0,-25.2865,-271.67	0/0:129:128,1:128:4554:1:36:0,-35.2346,-406.427	0/0:142:142,0:142:5081:0:0:0,-42.7463,-457.432	0/1:163:84,79:84:2978:79:2836:-206.41,0,-219.183	0/0:118:117,1:117:4158:1:36:0,-31.9233,-370.804	0/0:186:185,1:185:6579:1:27:0,-53.2918,-589.491	0/0:180:177,3:177:6309:3:108:0,-44.1102,-557.829	0/1:16:3,13:3:108:13:464:-37.281,0,-5.25869	0/1:259:105,154:105:3764:154:5496:-416.799,0,-260.992	0/0:70:70,0:70:2481:0:0:0,-21.0721,-223.543	0/1:32:15,17:15:536:17:612:-45.7805,0,-38.9419	0/0:173:172,1:172:6141:1:36:0,-48.4799,-549.191	0/1:48:22,26:22:777:26:932:-69.7494,0,-55.8009	0/1:18:11,7:11:384:7:252:-17.6104,0,-29.4761	0/1:16:6,10:6:216:10:360:-27.9278,0,-14.974	0/1:133:64,69:64:2285:69:2476:-183.056,0,-165.873	0/1:149:72,77:72:2588:77:2755:-203.337,0,-188.315	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:204:101,103:101:3612:103:3654:-267.653,0,-263.876	0/0:235:234,0:234:8331:0:0:0,-70.441,-749.438	0/0:120:119,1:119:4218:1:36:0,-32.5253,-376.203	0/0:98:98,0:98:3490:0:0:0,-29.5009,-314.309	0/1:183:103,80:103:3696:80:2876:-203.988,0,-277.753	0/0:186:185,1:185:6632:1:36:0,-52.3933,-593.359	0/0:57:56,1:56:1989:1:36:0,-13.5604,-175.684	0/0:52:52,0:52:1849:0:0:0,-15.6536,-166.688	0/0:78:78,0:78:2796:0:0:0,-23.4803,-251.88	0/0:24:23,1:23:828:1:36:0,-3.62644,-71.2458	0/1:110:57,53:57:2025:53:1898:-137.985,0,-149.408	0/0:90:90,0:90:3232:0:0:0,-27.0927,-291.101	0/0:197:197,0:197:7040:0:0:0,-59.3029,-633.663	0/0:157:157,0:157:5593:0:0:0,-47.2617,-503.494	0/0:144:144,0:144:5168:0:0:0,-43.3483,-465.259	0/0:127:126,1:126:4505:1:36:0,-34.6325,-402.019	0/1:26:11,15:11:388:15:525:-39.7513,0,-27.4306	0/1:181:85,96:85:3036:96:3418:-253.345,0,-218.984	0/0:123:123,0:123:4389:0:0:0,-37.0267,-395.183	0/1:239:111,128:111:3911:128:4559:-338.528,0,-280.224	0/0:85:85,0:85:3045:0:0:0,-25.5875,-274.278	0/0:84:84,0:84:2982:0:0:0,-25.2865,-268.61	0/1:109:45,64:45:1616:64:2284:-173.007,0,-112.918	0/1:141:70,71:70:2493:71:2541:-186.494,0,-182.176	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.102	0/1:99:59,40:59:2104:40:1436:-99.7357,0,-159.828	0/1:117:44,73:44:1572:73:2619:-200.736,0,-106.551	0/1:112:44,68:44:1584:68:2434:-185.599,0,-109.136	0/1:153:70,83:70:2482:83:2939:-218.685,0,-177.573	0/1:99:35,64:35:1260:64:2281:-175.748,0,-83.9035	0/0:104:104,0:104:3671:0:0:0,-31.3071,-330.592	0/0:139:139,0:139:4968:0:0:0,-41.8432,-447.27
chr10	1590085	.	CA	TG,TT	271223	PASS	AB=0.465206,0.532503;ABP=76.4486,67.0961;AC=139,49;AF=0.739362,0.260638;AN=188;AO=9139,3753;CIGAR=2X,2X;DP=12921;DPB=12921;DPRA=0,1.43402;EPP=18785.7,7996.95;EPPR=0;GTI=1;LEN=2,2;MEANALT=1.87234,2.28814;MQM=46.0246,54.7383;MQMR=0;NS=94;NUMALT=2;ODDS=0.311788;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=323011,131684;QR=0;RO=0;RPL=124,18;RPP=18785.7,7996.95;RPPR=0;RPR=9015,3735;RUN=1,1;SAF=9139,3753;SAP=19848.1,8152.55;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=mnp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:66:0,27,38:0:0:27,38:948,1329:-184.149,-107.995,-99.8676,-76.18,0,-64.7409	1/1:273:0,268,0:0:0:268,0:9540,0:-845.037,-80.676,0,-845.037,-80.676,-845.037	1/2:171:0,74,97:0:0:74,97:2638,3429:-490.436,-279.138,-256.861,-211.65,0,-182.45	1/2:249:0,124,124:0:0:124,124:4389,4337:-702.194,-352.061,-314.734,-350.229,0,-312.901	1/2:121:0,39,82:0:0:39,82:1365,2854:-339.214,-231.705,-219.965,-107.851,0,-83.1661	1/2:164:0,77,87:0:0:77,87:2696,3085:-467.418,-251.403,-228.223,-216.364,0,-190.175	1/2:232:0,97,135:0:0:97,135:3427,4792:-662.552,-390.425,-361.225,-272.476,0,-231.837	1/2:329:0,141,188:0:0:141,188:4951,6591:-931.065,-534.625,-492.179,-396.788,0,-340.194	1/2:188:0,65,122:0:0:65,122:2334,4314:-536.065,-350.864,-331.297,-185.232,0,-148.507	1/2:188:0,83,105:0:0:83,105:2895,3653:-527.388,-296.97,-271.985,-230.762,0,-199.154	1/2:49:0,21,27:0:0:21,27:729,924:-132.413,-74.5742,-68.2526,-57.8294,0,-49.7015	1/2:65:0,31,34:0:0:31,34:1105,1189:-185.061,-96.7389,-87.407,-88.6713,0,-78.4363	1/1:76:0,75,0:0:0:75,0:2655,0:-236.446,-22.5773,0,-236.446,-22.5773,-236.446	1/1:86:0,86,0:0:0:86,0:3078,0:-273.664,-25.8886,0,-273.664,-25.8886,-273.664	1/1:84:0,84,0:0:0:84,0:2929,0:-259.149,-25.2865,0,-259.149,-25.2865,-259.149	1/1:53:0,53,0:0:0:53,0:1882,0:-167.513,-15.9546,0,-167.513,-15.9546,-167.513	1/2:103:0,46,56:0:0:46,56:1641,1988:-294.096,-161.758,-147.911,-132.439,0,-115.581	1/1:102:0,102,0:0:0:102,0:3653,0:-324.021,-30.7051,0,-324.021,-30.7051,-324.021	1/2:36:0,15,21:0:0:15,21:508,734:-100.965,-59.9912,-55.4758,-41.3158,0,-34.9941	1/2:268:0,129,136:0:0:129,136:4576,4733:-746.627,-384.451,-345.618,-362.164,0,-321.223	1/2:225:0,119,105:0:0:119,105:4165,3663:-628.994,-296.922,-261.099,-332.184,0,-300.576	1/2:122:0,39,83:0:0:39,83:1383,2905:-347.291,-236.453,-224.713,-111.187,0,-86.202	1/1:157:0,150,5:0:0:150,5:5303,169:-465.165,-45.1545,0,-451.528,-31.5333,-450.023	1/1:178:0,164,14:0:0:164,14:5784,491:-510.296,-49.3689,0,-470.465,-9.18892,-466.25	1/2:109:0,35,74:0:0:35,74:1254,2647:-315.295,-215.501,-204.965,-100.146,0,-77.8703	1/1:338:0,337,1:0:0:337,1:11891,36:-1048.03,-101.447,0,-1045.1,-98.1509,-1044.8	1/1:275:0,274,1:0:0:274,1:9704,36:-859.247,-82.4822,0,-856.379,-79.2622,-856.078	1/2:45:0,16,28:0:0:16,28:561,993:-125.597,-80.6462,-75.8297,-44.9399,0,-36.511	1/2:426:0,181,245:0:0:181,245:6408,8578:-1208.97,-697.088,-642.601,-512.235,0,-438.482	1/2:309:0,176,132:0:0:176,132:6230,4581:-867.303,-370.416,-317.435,-496.874,0,-457.138	1/1:224:0,224,0:0:0:224,0:7926,0:-697.271,-67.4307,0,-697.271,-67.4307,-697.271	1/1:17:0,17,0:0:0:17,0:610,0:-53.639,-5.11751,0,-53.639,-5.11751,-53.639	1/2:28:0,18,10:0:0:18,10:646,360:-81.5681,-29.6876,-24.269,-52.2379,0,-49.2276	1/1:44:0,44,0:0:0:44,0:1543,0:-137.614,-13.2453,0,-137.614,-13.2453,-137.614	1/1:31:0,31,0:0:0:31,0:1066,0:-94.5425,-9.33193,0,-94.5425,-9.33193,-94.5425	1/1:9:0,9,0:0:0:9,0:324,0:-29.3841,-2.70927,0,-29.3841,-2.70927,-29.3841	1/1:162:0,162,0:0:0:162,0:5723,0:-505.262,-48.7669,0,-505.262,-48.7669,-505.262	1/2:233:0,123,110:0:0:123,110:4364,3858:-661.253,-313.712,-276.686,-347.889,0,-314.776	1/2:50:0,17,33:0:0:17,33:599,1155:-141.935,-93.9817,-88.8642,-48.3006,0,-38.3666	1/2:21:0,14,7:0:0:14,7:493,252:-60.5942,-20.871,-16.6566,-40.0787,0,-37.9715	1/2:188:0,89,99:0:0:89,99:3121,3481:-532.058,-283.238,-256.446,-249.168,0,-219.366	1/2:24:0,9,15:0:0:9,15:324,540:-70.3842,-44.3149,-41.6057,-26.426,0,-21.9105	1/2:263:0,117,144:0:0:117,144:4116,5026:-737.126,-407.694,-372.473,-329.427,0,-286.079	1/2:118:0,60,58:0:0:60,58:2141,2055:-338.354,-167.425,-149.363,-171.28,0,-153.821	1/1:55:0,54,0:0:0:54,0:1909,0:-168.77,-16.2556,0,-168.77,-16.2556,-168.77	1/1:97:0,97,0:0:0:97,0:3419,0:-302.544,-29.1999,0,-302.544,-29.1999,-302.544	1/1:120:0,120,0:0:0:120,0:4267,0:-379.074,-36.1236,0,-379.074,-36.1236,-379.074	1/2:322:0,130,192:0:0:130,192:4601,6670:-907.786,-541.294,-502.16,-366.839,0,-309.041	1/1:128:0,128,0:0:0:128,0:4539,0:-398.663,-38.5318,0,-398.663,-38.5318,-398.663	1/1:226:0,226,0:0:0:226,0:8011,0:-705.857,-68.0328,0,-705.857,-68.0328,-705.857	1/1:144:0,144,0:0:0:144,0:5115,0:-451.502,-43.3483,0,-451.502,-43.3483,-451.502	1/2:28:0,16,12:0:0:16,12:572,421:-80.6788,-34.5813,-29.7648,-46.4492,0,-42.8369	1/2:174:0,67,107:0:0:67,107:2378,3811:-499.41,-310.143,-289.974,-189.617,0,-157.407	1/1:95:0,95,0:0:0:95,0:3350,0:-296.66,-28.5979,0,-296.66,-28.5979,-296.66	1/2:49:0,27,22:0:0:27,22:952,790:-141.011,-64.5612,-56.4334,-76.8033,0,-70.1806	1/1:156:0,156,0:0:0:156,0:5466,0:-482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chr10	1590114	.	GGA	CGT,GGT	541653	PASS	AB=0.449467,0.545567;ABP=306.746,249.985;AC=125,63;AF=0.664894,0.335106;AN=188;AO=13237,7748;CIGAR=1X1M1X,2M1X;DP=21079;DPB=21110.7;DPRA=0,1.65583;EPP=28746.8,16827.6;EPPR=7.35324;GTI=2;LEN=3,1;MEANALT=2.79787,2.8172;MQM=51.9961,56.6826;MQMR=56;NS=94;NUMALT=2;ODDS=1.29082;PAIRED=0,0;PAIREDR=0;PAO=58,18.5;PQA=1980,0;PQR=0;PRO=18.5;QA=460723,274136;QR=56;RO=2;RPL=5957,4418;RPP=290.144,334.769;RPPR=3.0103;RPR=7280,3330;RUN=1,1;SAF=5957,4418;SAP=290.144,334.769;SAR=7280,3330;SRF=1;SRP=3.0103;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:163:0,61,99:0:0:61,99:2111,3496:-455.216,-284.554,-266.191,-170.669,0,-140.868	1/1:288:0,284,4:0:0:284,4:9951,144:-883.608,-85.4925,0,-871.867,-73.747,-870.663	1/2:322:0,132,188:0:0:132,188:4605,6606:-908.279,-537.244,-497.508,-371.024,0,-314.431	1/2:468:0,151,316:0:0:151,316:5249,11132:-1325.97,-904.465,-859.01,-421.547,0,-326.422	1/2:193:0,58,134:0:0:58,134:2061,4751:-551.088,-386.387,-368.927,-164.771,0,-124.433	1/2:177:0,59,118:0:0:59,118:2054,4198:-505.965,-341.306,-323.545,-164.648,0,-129.126	1/2:341:0,142,198:0:0:142,198:4977,7047:-973.354,-573.971,-531.224,-399.414,0,-339.81	1/2:404:0,154,248:0:0:154,248:5350,8840:-1148.49,-719.372,-673.014,-429.212,0,-354.556	1/2:394:0,159,235:0:0:159,235:5457,8367:-1120.36,-681.695,-633.831,-439.01,0,-368.268	1/2:257:0,79,177:0:0:79,177:2740,6275:-729.161,-510.661,-486.879,-218.495,0,-165.213	1/2:73:0,24,49:0:0:24,49:806,1714:-203.412,-139.33,-132.105,-64.4183,0,-49.6678	1/2:192:0,96,95:0:0:96,95:3360,3315:-541.367,-269.359,-240.46,-272.086,0,-243.488	1/1:136:0,136,0:0:0:136,0:4709,0:-421.803,-40.9401,0,-421.803,-40.9401,-421.803	1/2:96:0,87,9:0:0:87,9:3051,324:-271.734,-26.4617,-0.272097,-245.351,0,-242.642	1/2:151:0,136,15:0:0:136,15:4720,523:-422.453,-42.814,-1.8739,-379.987,0,-375.472	1/1:87:0,84,3:0:0:84,3:2898,108:-259.423,-25.2865,0,-250.642,-16.5065,-249.739	1/2:106:0,33,72:0:0:33,72:1124,2580:-299.88,-209.931,-199.997,-89.9327,0,-68.2585	1/1:81:0,79,2:0:0:79,2:2773,72:-245.23,-23.7814,0,-239.36,-17.8989,-238.758	1/2:65:0,20,44:0:0:20,44:691,1520:-179.409,-123.414,-117.393,-55.9906,0,-42.7452	1/2:426:0,172,254:0:0:172,254:5999,9004:-1211.8,-733.36,-681.583,-478.791,0,-402.329	1/2:362:0,126,234:0:0:126,234:4409,8264:-1024.55,-671.29,-633.361,-353.315,0,-282.874	1/2:231:0,77,150:0:0:77,150:2650,5302:-645.308,-431.485,-408.306,-213.812,0,-168.657	1/1:289:0,273,14:0:0:273,14:9466,496:-839.861,-82.1812,0,-799.65,-41.9456,-795.436	1/2:272:0,240,29:0:0:240,29:8408,1040:-760.282,-84.7859,-12.5387,-675.536,0,-666.806	1/2:263:0,122,141:0:0:122,141:4223,4947:-743.704,-402.214,-365.489,-341.836,0,-299.391	1/1:633:0,627,3:0:0:627,3:21736,108:-1938.28,-188.746,0,-1929.47,-179.918,-1928.56	1/2:548:0,448,99:0:0:448,99:15602,3503:-1540.28,-284.361,-149.499,-1255.99,0,-1226.18	1/2:71:0,24,46:0:0:24,46:829,1610:-197.727,-130.74,-123.515,-66.9737,0,-53.1263	1/2:676:0,259,412:0:0:259,412:9029,14528:-1907.19,-1181.44,-1103.47,-725.788,0,-601.764	1/2:366:0,165,201:0:0:165,201:5785,7055:-1032.86,-571.986,-522.316,-460.866,0,-400.359	1/1:286:0,260,24:0:0:260,24:9102,856:-805.398,-78.2678,0,-736.097,-8.93336,-728.872	1/1:34:0,32,2:0:0:32,2:1122,68:-99.5319,-9.63296,0,-94.0165,-3.77731,-93.4144	1/2:76:0,21,54:0:0:21,54:754,1894:-214.966,-153.949,-147.627,-61.155,0,-44.8994	1/2:89:0,29,60:0:0:29,60:989,2127:-252.693,-173.022,-164.292,-80.0145,0,-61.9527	1/2:62:0,17,45:0:0:17,45:600,1591:-177.074,-129.862,-124.745,-47.5567,0,-34.0104	1/2:123:0,110,13:0:0:110,13:3777,455:-343.563,-37.0364,-3.92309,-306.554,0,-302.641	1/1:343:0,333,7:0:0:333,7:11393,248:-1016.84,-100.243,0,-996.72,-80.1091,-994.613	1/2:321:0,128,189:0:0:128,189:4460,6711:-902.419,-545.9,-507.368,-356.533,0,-299.638	1/2:100:0,36,64:0:0:36,64:1219,2263:-282.317,-184.152,-173.315,-98.5078,0,-79.2419	1/2:52:0,8,44:0:0:8,44:274,1568:-149.905,-127.771,-125.363,-22.4769,0,-9.23154	1/2:315:0,138,177:0:0:138,177:4819,6275:-898.085,-510.72,-469.178,-387.395,0,-334.113	1/2:47:0,23,24:0:0:23,24:800,847:-133.914,-69.2222,-62.2985,-65.0406,0,-57.8158	1/2:498:1,188,306:1:28:188,306:6491,10842:-1402.15,-879.271,-824.894,-520.973,0,-431.075	1/2:176:0,67,109:0:0:67,109:2329,3858:-500.655,-314.216,-294.047,-186.786,0,-153.973	1/1:101:0,100,1:0:0:100,1:3488,36:-311.461,-30.103,0,-308.523,-26.8058,-308.222	1/1:320:0,315,3:0:0:315,3:10986,108:-983.028,-94.8245,0,-974.216,-85.9787,-973.312	1/1:221:0,205,16:0:0:205,16:7090,568:-633.238,-61.7112,0,-586.979,-15.0981,-582.163	1/2:440:0,183,254:0:0:183,254:6399,9049:-1249.07,-735.968,-680.879,-513.128,0,-436.667	1/1:226:0,216,10:0:0:216,10:7496,352:-665.584,-65.0225,0,-636.982,-36.07,-633.972	1/1:253:0,246,5:0:0:246,5:8621,180:-761.528,-74.0534,0,-746.868,-59.3653,-745.363	1/1:267:0,251,15:0:0:251,15:8815,540:-784.775,-75.5585,0,-740.869,-31.6476,-736.353	1/2:36:0,6,30:0:0:6,30:216,1065:-104.184,-86.9899,-85.1837,-17.5463,0,-8.51538	1/2:308:1,130,174:1:28:130,174:4503,6185:-862.449,-501.008,-464.093,-359.587,0,-309.426	1/1:187:0,179,7:0:0:1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chr10	1590156	.	T	A	144886	PASS	AB=0.477833;ABP=32.0835;AC=125;AF=0.664894;AN=188;AO=7288;CIGAR=1X;DP=10991;DPB=10991;DPRA=7.37567;EPP=15828.7;EPPR=8039.63;GTI=3;LEN=1;MEANALT=1.02151;MQM=59.662;MQMR=59.9062;NS=94;NUMALT=1;ODDS=0.483552;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=260935;QR=132351;RO=3701;RPL=7288;RPP=15828.7;RPPR=8039.63;RPR=0;RUN=1;SAF=0;SAP=15828.7;SAR=7288;SRF=0;SRP=8039.63;SRR=3701;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:116:67,49:67:2378:49:1754:-123.086,0,-179.347	1/1:94:0,94:0:0:94:3360:-302.587,-28.2968,0	0/1:167:94,73:94:3376:73:2605:-183.784,0,-253.782	0/1:266:183,83:183:6542:83:2969:-187.352,0,-508.779	0/1:85:51,34:51:1836:34:1224:-84.8713,0,-139.933	0/1:32:16,16:16:576:16:576:-42.5338,0,-42.5416	0/1:137:63,74:63:2245:74:2626:-195.339,0,-161.071	0/1:137:78,59:78:2789:59:2124:-150.15,0,-210.008	0/1:239:120,119:120:4282:119:4264:-311.188,0,-313.609	0/1:98:67,31:67:2374:31:1116:-71.2415,0,-184.412	0/1:35:20,15:20:720:15:540:-38.3959,0,-54.5927	0/1:141:64,77:64:2296:77:2768:-206.883,0,-164.456	1/1:106:0,106:0:0:106:3812:-343.051,-31.9092,0	1/1:49:3,46:3:108:46:1652:-138.839,-4.6753,0	0/1:98:10,88:10:360:88:3149:-254.085,0,-3.24336	1/1:62:0,62:0:0:62:2217:-199.788,-18.6639,0	0/1:29:11,18:11:392:18:644:-49.5607,0,-26.8902	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	0/1:40:24,16:24:864:16:576:-40.0978,0,-66.0332	0/1:193:118,75:118:4225:75:2696:-184.78,0,-322.329	0/1:174:126,48:126:4519:48:1728:-103.417,0,-354.48	0/1:126:74,52:74:2641:52:1864:-130.108,0,-200.005	1/1:171:4,167:4:144:167:5968:-523.191,-38.1649,0	0/1:129:18,111:18:648:111:3984:-319.879,0,-19.819	0/1:167:72,95:72:2584:95:3404:-256.283,0,-182.532	1/1:363:1,362:1:36:362:12967:-1162.58,-105.676,0	0/1:334:54,280:54:1932:280:10013:-800.538,0,-73.6034	0/1:34:16,18:16:576:18:648:-48.3992,0,-41.9353	0/1:308:189,119:189:6766:119:4253:-289.737,0,-516.274	0/1:116:76,40:76:2701:40:1415:-92.4874,0,-208.409	1/1:115:4,111:4:144:111:3980:-345.029,-21.3048,0	0/1:20:4,16:4:144:16:576:-46.1498,0,-7.29302	0/1:58:43,15:43:1548:15:540:-31.4722,0,-122.041	0/1:55:37,18:37:1309:18:648:-42.087,0,-101.551	0/1:40:31,9:31:1101:9:320:-17.1012,0,-87.3313	1/1:117:8,109:8:288:109:3867:-321.876,-8.9531,0	1/1:211:2,209:2:72:209:7499:-668.066,-56.6806,0	0/1:124:71,53:71:2525:53:1883:-132.25,0,-190.173	0/1:55:31,24:31:1116:24:860:-60.9488,0,-84.195	0/1:33:26,7:26:932:7:244:-12.3077,0,-74.2603	0/1:165:84,81:84:3012:81:2893:-210.925,0,-221.641	0/1:27:9,18:9:320:18:644:-50.1582,0,-21.0145	0/1:284:164,120:164:5842:120:4304:-301.877,0,-440.399	0/1:83:43,40:43:1548:40:1432:-104.178,0,-114.625	1/1:72:1,71:1:36:71:2546:-225.784,-18.0759,0	1/1:231:4,227:4:144:227:8140:-719.274,-56.2243,0	1/1:135:12,123:12:432:123:4428:-359.415,-1.4425,0	0/1:174:81,93:81:2867:93:3340:-248.119,0,-205.884	1/1:127:6,121:6:216:121:4318:-368.974,-18.4403,0	1/1:93:3,90:3:108:90:3221:-280.022,-17.9206,0	1/1:144:6,138:6:216:138:4949:-425.762,-23.5587,0	0/0:13:12,1:12:432:1:36:0,-0.315115,-35.6206	0/1:160:81,79:81:2882:79:2820:-205.87,0,-211.441	1/1:105:5,100:5:180:100:3581:-305.444,-15.0561,0	0/0:16:16,0:16:561:0:0:0,-4.81648,-50.772	1/1:134:2,132:2:72:132:4710:-417.008,-33.511,0	0/1:79:43,36:43:1521:36:1281:-91.8017,0,-113.4	0/1:10:2,8:2:68:8:284:-22.8931,0,-3.44741	0/1:24:8,16:8:288:16:572:-44.5887,0,-19.0427	0/1:132:70,62:70:2505:62:2188:-157.426,0,-185.96	0/1:88:39,49:39:1389:49:1764:-132.553,0,-98.8163	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.505	0/1:143:71,72:71:2533:72:2592:-190.424,0,-185.172	1/1:191:4,187:4:144:187:6641:-584.322,-44.1831,0	1/1:117:3,114:3:108:114:4083:-357.566,-25.1453,0	0/1:99:14,84:14:504:84:3024:-242.515,0,-15.8327	0/1:240:140,100:140:5002:100:3554:-247.693,0,-378.077	1/1:203:2,201:2:72:201:7163:-637.577,-54.2724,0	0/1:33:3,30:3:108:30:1076:-87.0825,0,-0.14118	1/1:41:1,40:1:36:40:1436:-125.915,-8.74396,0	1/1:76:2,74:2:64:74:2648:-232.485,-16.7996,0	0/1:37:7,30:7:252:30:1080:-86.3742,0,-11.8908	0/1:172:111,61:111:3992:61:2192:-145.765,0,-307.675	1/1:100:6,94:6:216:94:3376:-284.205,-10.3125,0	1/1:181:6,175:6:216:175:6251:-542.53,-34.7006,0	1/1:135:7,128:7:252:128:4589:-390.132,-17.6101,0	1/1:110:6,104:6:216:104:3719:-315.101,-13.3228,0	1/1:106:1,105:1:36:105:3753:-334.343,-28.3109,0	0/1:20:13,7:13:468:7:237:-15.6385,0,-36.439	1/1:103:6,97:6:216:97:3484:-293.952,-11.2156,0	0/1:121:17,104:17:612:104:3717:-298.13,0,-18.9806	0/1:469:320,149:320:11473:149:5335:-338.51,0,-891.235	1/1:70:2,67:2:72:67:2412:-210.492,-14.2942,0	1/1:94:1,93:1:36:93:3348:-297.918,-24.6985,0	0/1:66:36,30:36:1281:30:1080:-77.6453,0,-95.7233	0/1:185:90,95:90:3202:95:3408:-251.215,0,-232.71	0/1:22:2,20:2:72:20:720:-58.4979,0,-0.214062	0/1:77:46,31:46:1644:31:1116:-77.5642,0,-125.069	0/1:99:51,48:51:1836:48:1728:-125.986,0,-135.719	0/1:29:18,11:18:644:11:392:-26.8902,0,-49.5607	0/1:102:76,26:76:2728:26:932:-53.48,0,-215.056	0/1:80:59,21:59:2120:21:756:-44.2839,0,-166.986	1/1:128:6,122:6:216:122:4384:-374.916,-18.7413,0	1/1:130:3,127:3:108:127:4557:-400.176,-29.0587,0
chr10	1691375	.	A	G	23492.7	PASS	AB=0.464197;ABP=43.2825;AC=49;AF=0.260638;AN=188;AO=1686;CIGAR=1X;DP=6873;DPB=6873;DPRA=1.09661;EPP=3664.11;EPPR=11266.4;GTI=1;LEN=1;MEANALT=1;MQM=59.726;MQMR=59.9717;NS=94;NUMALT=1;ODDS=1.79659;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=55891;QR=184993;RO=5187;RPL=0;RPP=3664.11;RPPR=11266.4;RPR=1686;RUN=1;SAF=0;SAP=3664.11;SAR=1686;SRF=0;SRP=11266.4;SRR=5187;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:33:20,13:20:708:13:401:-26.4549,0,-54.1116	0/0:64:63,1:63:2252:1:27:0,-16.5661,-200.243	0/1:76:37,39:37:1328:39:1284:-92.8496,0,-96.944	0/1:172:96,76:96:3456:76:2542:-177.237,0,-259.474	0/1:23:9,14:9:316:14:456:-34.4284,0,-21.8552	0/1:40:26,14:26:916:14:492:-32.5711,0,-70.7139	0/1:34:16,18:16:576:18:590:-43.1632,0,-41.94	0/1:153:77,76:77:2747:76:2561:-184.678,0,-201.415	0/1:41:23,18:23:816:18:600:-41.9648,0,-61.4195	0/1:94:41,53:41:1459:53:1812:-135.057,0,-103.308	0/1:31:23,8:23:820:8:245:-13.0171,0,-64.7906	0/1:53:31,22:31:1079:22:702:-47.5268,0,-81.4631	0/0:45:45,0:45:1608:0:0:0,-13.5463,-145.01	0/0:57:57,0:57:2023:0:0:0,-17.1587,-182.325	0/0:52:52,0:52:1856:0:0:0,-15.6536,-167.32	0/0:50:50,0:50:1784:0:0:0,-15.0515,-160.843	0/1:59:33,26:33:1172:26:837:-57.8675,0,-88.0267	0/0:60:59,1:59:2099:1:32:0,-14.8625,-185.98	0/1:35:22,13:22:760:13:432:-28.6582,0,-58.1798	0/1:110:54,56:54:1914:56:1881:-136.438,0,-139.423	0/1:146:70,76:70:2499:76:2612:-191.36,0,-181.212	0/1:74:24,50:24:855:50:1668:-128.118,0,-54.994	0/0:64:64,0:64:2283:0:0:0,-19.2659,-205.731	0/1:55:49,6:49:1760:6:194:-1.22091,0,-142.127	0/1:38:24,14:24:855:14:436:-28.1034,0,-65.831	0/0:291:291,0:291:10421:0:0:0,-87.5997,-937.807	0/0:128:127,1:127:4552:1:36:0,-34.9336,-406.229	0/1:26:17,9:17:604:9:284:-18.0394,0,-46.8638	0/1:150:81,69:81:2903:69:2292:-161.377,0,-216.35	0/1:65:41,24:41:1463:24:808:-53.4578,0,-112.398	0/0:122:122,0:122:4339:0:0:0,-36.7257,-390.679	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:11:4,7:4:144:7:227:-17.4371,0,-10.0023	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:180:180,0:180:6410:0:0:0,-54.1854,-576.961	0/1:202:89,113:89:3164:113:3721:-274.283,0,-224.176	0/1:52:24,28:24:860:28:878:-63.6571,0,-62.0683	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.57002	0/1:95:49,46:49:1756:46:1566:-112.593,0,-129.726	0/1:20:10,10:10:356:10:330:-23.9987,0,-26.3606	0/1:113:59,54:59:2111:54:1789:-127.256,0,-156.242	0/1:37:18,19:18:635:19:642:-46.9585,0,-46.3389	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/0:76:76,0:76:2706:0:0:0,-22.8783,-243.783	0/1:167:98,69:98:3486:69:2316:-158.416,0,-263.68	0/0:95:95,0:95:3391:0:0:0,-28.5978,-305.405	0/0:126:126,0:126:4495:0:0:0,-37.9298,-404.623	0/0:106:106,0:106:3782:0:0:0,-31.9092,-340.579	0/1:10:6,4:6:216:4:136:-9.56524,0,-16.7802	0/1:87:32,55:32:1143:55:1849:-140.49,0,-76.9891	0/0:63:63,0:63:2247:0:0:0,-18.9649,-202.493	0/1:30:20,10:20:712:10:313:-19.4427,0,-55.3758	0/0:104:102,2:102:3613:2:63:0,-25.324,-319.391	0/1:56:30,26:30:1068:26:851:-60.0328,0,-79.5744	0/1:8:6,2:6:212:2:72:-4.42848,0,-17.0166	0/1:16:9,7:9:324:7:244:-17.4829,0,-24.6894	0/1:70:37,33:37:1315:33:1101:-78.3154,0,-97.5789	0/1:78:50,28:50:1783:28:945:-61.8737,0,-137.216	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:195:111,84:111:3953:84:2796:-192.982,0,-297.261	0/0:165:165,0:165:5902:0:0:0,-49.6699,-531.289	0/0:69:69,0:69:2467:0:0:0,-20.7711,-222.283	0/0:60:60,0:60:2156:0:0:0,-18.0618,-194.307	0/1:153:74,79:74:2648:79:2617:-189.147,0,-192.506	0/0:70:69,1:69:2451:1:32:0,-17.8728,-217.644	0/0:16:16,0:16:564:0:0:0,-4.81648,-51.0903	0/0:87:87,0:87:3116:0:0:0,-26.1896,-280.667	0/0:55:55,0:55:1959:0:0:0,-16.5566,-176.585	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.0516	0/1:54:27,27:27:972:27:884:-63.5987,0,-71.5423	0/0:54:54,0:54:1932:0:0:0,-16.2556,-174.157	0/0:131:130,1:130:4635:1:36:0,-35.8367,-413.716	0/0:91:91,0:91:3243:0:0:0,-27.3937,-292.035	0/0:82:82,0:82:2920:0:0:0,-24.6845,-263.036	0/0:87:87,0:87:3128:0:0:0,-26.1896,-281.745	0/0:16:16,0:16:568:0:0:0,-4.81648,-51.4519	0/0:75:75,0:75:2688:0:0:0,-22.5772,-242.16	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/1:193:97,96:97:3428:96:3184:-228.655,0,-250.633	0/0:89:89,0:89:3151:0:0:0,-26.7917,-283.817	0/0:42:42,0:42:1499:0:0:0,-12.6433,-135.204	0/1:70:42,28:42:1496:28:892:-59.5015,0,-113.862	0/1:106:62,44:62:2189:44:1432:-97.2547,0,-165.366	0/0:30:30,0:30:1068:0:0:0,-9.0309,-96.4321	0/1:67:42,25:42:1487:25:786:-50.8625,0,-113.955	0/1:40:27,13:27:952:13:413:-25.4355,0,-73.954	0/1:34:25,9:25:900:9:288:-15.9947,0,-71.086	0/1:87:49,38:49:1743:38:1256:-87.1376,0,-130.964	0/1:53:24,29:24:860:29:940:-68.943,0,-61.7672	0/0:60:60,0:60:2147:0:0:0,-18.0618,-193.497	0/0:66:66,0:66:2351:0:0:0,-19.868,-211.849
chr10	1691390	.	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chr10	2053423	.	C	A	37519.6	PASS	AB=0.333446;ABP=2142.64;AC=49;AF=0.260638;AN=188;AO=2971;CIGAR=1X;DP=19126;DPB=19126;DPRA=0.875819;EPP=6454.45;EPPR=35048.4;GTI=7;LEN=1;MEANALT=1.09091;MQM=53.5988;MQMR=59.9749;NS=94;NUMALT=1;ODDS=2.58831;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104402;QR=574442;RO=16147;RPL=0;RPP=6454.45;RPPR=3.09435;RPR=2971;RUN=1;SAF=0;SAP=6454.45;SAR=2971;SRF=8088;SRP=3.1234;SRR=8059;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:70:49,21:49:1738:21:756:-46.9408,0,-135.601	0/0:421:421,0:421:14968:0:0:0,-126.734,-1346.85	0/1:365:263,102:263:9330:102:3565:-207.885,0,-729.538	0/1:451:288,163:288:10295:163:5652:-370.623,0,-790.706	0/1:144:96,48:96:3407:48:1687:-107.876,0,-263.495	0/1:85:67,18:67:2391:18:636:-31.335,0,-189.858	0/1:241:169,72:169:5975:72:2524:-154.04,0,-465.309	0/1:354:209,145:209:7464:145:5073:-348.159,0,-565.238	0/1:108:88,20:88:3102:20:698:-30.4209,0,-246.895	0/1:183:134,49:134:4751:49:1746:-101.322,0,-372.661	0/1:132:78,54:78:2768:54:1910:-132.034,0,-209.627	0/1:125:80,45:80:2863:45:1524:-99.1816,0,-219.907	0/0:137:137,0:137:4891:0:0:0,-41.2411,-440.342	0/0:158:158,0:158:5588:0:0:0,-47.5627,-503.046	0/0:136:136,0:136:4838:0:0:0,-40.9401,-435.572	0/0:75:75,0:75:2651:0:0:0,-22.5772,-238.838	0/1:110:74,36:74:2625:36:1280:-81.469,0,-203.383	0/0:97:97,0:97:3430:0:0:0,-29.1999,-308.907	0/1:93:58,35:58:2031:35:1244:-83.7977,0,-155.064	0/1:375:266,106:266:9503:106:3731:-223.281,0,-742.882	0/1:219:158,61:158:5600:61:2127:-123.492,0,-438.198	0/1:102:55,47:55:1925:47:1631:-116.229,0,-142.817	0/0:148:148,0:148:5240:0:0:0,-44.5524,-471.739	0/0:292:288,4:288:10244:4:144:0,-74.7296,-908.718	0/1:157:135,22:135:4824:22:747:-20.2045,0,-387.054	0/0:809:809,0:809:28799:0:0:0,-243.533,-2591.07	0/0:616:615,0:615:21953:0:0:0,-185.133,-1974.84	0/1:67:45,22:45:1599:22:775:-49.5415,0,-124.03	0/1:469:331,138:331:11823:138:4861:-295.836,0,-922.74	0/1:212:158,54:158:5658:54:1894:-106.391,0,-445.519	0/0:211:211,0:211:7538:0:0:0,-63.5173,-678.459	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:47:22,25:22:780:25:888:-65.9836,0,-56.3746	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:379:379,0:379:13485:0:0:0,-114.09,-1213.45	0/1:276:169,107:169:6037:107:3792:-257.458,0,-460.349	0/1:133:79,53:79:2789:53:1885:-128.631,0,-211.155	0/1:4:3,1:3:108:1:36:-2.38905,0,-8.87105	0/1:328:237,91:237:8457:91:3217:-190.472,0,-662.393	0/1:67:44,23:44:1567:23:819:-53.686,0,-121.152	0/1:291:198,93:198:7076:93:3302:-208.824,0,-549.292	0/1:99:60,39:60:2148:39:1362:-92.6948,0,-163.783	0/0:141:141,0:141:4926:0:0:0,-42.4452,-443.493	0/1:114:92,22:92:3259:22:784:-36.3673,0,-259.21	0/0:349:349,0:349:12416:0:0:0,-105.059,-1117.28	0/1:341:228,113:228:8161:113:4006:-257.581,0,-631.823	0/0:314:314,0:314:11161:0:0:0,-94.5234,-1004.38	0/0:362:362,0:362:12897:0:0:0,-108.973,-1160.55	0/0:443:443,0:443:15737:0:0:0,-133.356,-1416.04	0/1:14:12,2:12:432:2:72:-2.61737,0,-35.0068	0/1:347:212,135:212:7581:135:4753:-322.082,0,-577.869	0/0:98:98,0:98:3486:0:0:0,-29.5009,-313.952	0/0:26:25,1:25:888:1:36:0,-4.23755,-76.6416	0/0:317:317,0:317:11261:0:0:0,-95.4265,-1013.38	0/1:105:85,20:85:3039:20:694:-30.9647,0,-242.131	0/1:10:8,2:8:288:2:72:-3.76642,0,-23.2547	0/1:36:20,16:20:720:16:576:-41.265,0,-54.2917	0/1:115:77,38:77:2733:38:1356:-87.4344,0,-211.594	0/1:192:118,74:118:4140:74:2589:-175.018,0,-314.989	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:321:201,120:201:7171:120:4264:-286.601,0,-548.818	0/0:462:461,1:461:16399:1:32:0,-135.878,-1472.38	0/0:239:239,0:239:8529:0:0:0,-71.9462,-767.606	0/0:225:223,1:223:7888:1:36:0,-64.1947,-706.128	0/1:302:219,83:219:7807:83:2934:-173.012,0,-611.747	0/0:374:371,2:371:13239:2:72:0,-105.812,-1184.48	0/0:42:42,0:42:1500:0:0:0,-12.6433,-135.295	0/0:161:161,0:161:5721:0:0:0,-48.4658,-515.008	0/0:163:163,0:163:5773:0:0:0,-49.0679,-519.686	0/0:39:39,0:39:1381:0:0:0,-11.7402,-124.587	0/1:124:64,60:64:2296:60:2064:-147.704,0,-169.573	0/0:168:168,0:168:5971:0:0:0,-50.573,-537.494	0/0:472:472,0:472:16735:0:0:0,-142.086,-1505.78	0/0:434:434,0:434:15516:0:0:0,-130.647,-1396.14	0/0:318:318,0:318:11352:0:0:0,-95.7275,-1021.56	0/0:310:309,1:309:10957:1:32:0,-90.1236,-982.833	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:359:359,0:359:12798:0:0:0,-108.07,-1151.64	0/1:272:184,88:184:6546:88:3096:-196.146,0,-507.341	0/1:432:277,155:277:9873:155:5444:-359.36,0,-758.47	0/0:199:199,0:199:7047:0:0:0,-59.905,-634.291	0/0:104:104,0:104:3711:0:0:0,-31.3071,-334.192	0/1:127:80,47:80:2836:47:1633:-108.63,0,-217.247	0/1:191:128,63:128:4538:63:2183:-138.766,0,-351.091	0/0:91:91,0:91:3227:0:0:0,-27.3937,-290.651	0/1:107:60,46:60:2112:46:1627:-114.095,0,-158.071	0/1:111:68,43:68:2399:43:1472:-98.9727,0,-182.745	0/1:80:52,28:52:1837:28:988:-64.6386,0,-141.526	0/1:147:85,62:85:3012:62:2179:-151.341,0,-227.059	0/1:85:31,54:31:1083:54:1902:-145.525,0,-72.1905	0/0:294:294,0:294:10417:0:0:0,-88.5028,-937.451	0/0:194:194,0:194:6923:0:0:0,-58.3998,-623.139
chr10	2053433	.	A	G	38102.7	PASS	AB=0.337904;ABP=2000.18;AC=49;AF=0.260638;AN=188;AO=2976;CIGAR=1X;DP=18810;DPB=18810;DPRA=0.995697;EPP=6465.31;EPPR=34360;GTI=8;LEN=1;MEANALT=1.06557;MQM=53.6468;MQMR=59.9712;NS=94;NUMALT=1;ODDS=0.221542;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=104852;QR=563069;RO=15830;RPL=0;RPP=6465.31;RPPR=28.3739;RPR=2976;RUN=1;SAF=0;SAP=6465.31;SAR=2976;SRF=7700;SRP=28.3739;SRR=8130;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:69:48,21:48:1708:21:747:-46.4361,0,-133.165	0/0:398:398,0:398:14072:0:0:0,-119.81,-1266.25	0/1:353:254,99:254:9039:99:3545:-209.911,0,-707.225	0/1:444:280,164:280:9998:164:5796:-386.256,0,-766.095	0/1:146:95,51:95:3376:51:1770:-114.466,0,-260.105	0/1:84:65,19:65:2318:19:631:-31.3392,0,-183.592	0/1:236:165,71:165:5878:71:2494:-152.459,0,-458.087	0/1:352:208,144:208:7428:144:5096:-350.92,0,-562.602	0/1:104:84,20:84:2993:20:712:-32.8727,0,-238.293	0/1:178:130,48:130:4623:48:1696:-99.0353,0,-362.648	0/1:133:76,57:76:2696:57:2008:-140.567,0,-202.846	0/1:121:78,43:78:2792:43:1516:-99.6384,0,-214.725	0/0:135:133,2:133:4729:2:72:0,-33.8023,-418.933	0/0:156:156,0:156:5574:0:0:0,-46.9607,-501.466	0/0:133:133,0:133:4759:0:0:0,-40.037,-428.463	0/0:75:75,0:75:2655:0:0:0,-22.5772,-239.197	0/1:107:70,37:70:2466:37:1310:-85.2138,0,-189.982	0/0:95:95,0:95:3389:0:0:0,-28.5978,-305.216	0/1:88:53,34:53:1868:34:1203:-81.4669,0,-141.847	0/1:375:268,107:268:9537:107:3759:-225.372,0,-745.401	0/1:220:156,64:156:5539:64:2254:-134.726,0,-432.408	0/1:101:55,46:55:1952:46:1611:-114.761,0,-145.552	0/0:141:141,0:141:4948:0:0:0,-42.4452,-445.471	0/0:287:284,3:284:10120:3:108:0,-76.4642,-900.803	0/1:154:131,23:131:4681:23:806:-26.3573,0,-375.091	0/0:794:792,2:792:28190:2:72:0,-232.181,-2529.45	0/0:607:607,0:607:21627:0:0:0,-182.725,-1945.88	0/1:67:45,22:45:1604:22:777:-49.8327,0,-124.481	0/1:463:323,140:323:11519:140:4915:-302.445,0,-897.209	0/1:209:157,52:157:5590:52:1841:-102.413,0,-440.307	0/0:203:203,0:203:7214:0:0:0,-61.1091,-649.314	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:44:22,22:22:768:22:760:-55.3831,0,-56.1923	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:18:18,0:18:632:0:0:0,-5.41854,-57.2068	0/0:20:20,0:20:702:0:0:0,-6.0206,-63.5025	0/0:377:376,1:376:13441:1:36:0,-109.89,-1205.88	0/1:271:163,108:163:5773:108:3812:-260.644,0,-438.109	0/1:129:78,51:78:2788:51:1819:-123.815,0,-212.328	0/1:4:3,1:3:108:1:36:-2.38905,0,-8.87105	0/1:318:227,91:227:8104:91:3222:-193.093,0,-633.65	0/1:70:45,25:45:1608:25:896:-59.6701,0,-123.938	0/1:284:190,94:190:6709:94:3303:-210.955,0,-518.257	0/1:102:61,41:61:2179:41:1450:-99.5649,0,-165.668	0/0:138:138,0:138:4884:0:0:0,-41.5421,-439.713	0/1:111:90,21:90:3166:21:744:-33.6737,0,-251.748	0/0:337:337,0:337:12005:0:0:0,-101.447,-1080.31	0/1:331:222,109:222:7853:109:3891:-250.196,0,-607.132	0/0:306:306,0:306:10826:0:0:0,-92.1152,-974.245	0/0:356:356,0:356:12713:0:0:0,-107.167,-1143.99	0/0:432:432,0:432:15397:0:0:0,-130.045,-1385.44	0/1:13:11,2:11:396:2:72:-2.9184,0,-32.0694	0/1:342:206,135:206:7326:135:4741:-322.605,0,-556.378	0/0:98:97,1:97:3461:1:36:0,-25.9027,-308.103	0/0:26:25,1:25:891:1:36:0,-4.23755,-76.9114	0/0:320:320,0:320:11348:0:0:0,-96.3296,-1021.2	0/1:106:86,20:86:3076:20:670:-28.6026,0,-245.159	0/1:11:8,3:8:288:3:104:-6.33062,0,-22.9537	0/1:36:20,16:20:716:16:549:-38.8259,0,-53.9306	0/1:112:75,37:75:2634:37:1319:-85.0123,0,-203.59	0/1:192:116,76:116:4111:76:2661:-181.434,0,-312.378	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:321:199,122:199:7117:122:4316:-291.352,0,-543.957	0/0:460:459,1:459:16303:1:36:0,-134.878,-1463.35	0/0:226:226,0:226:8035:0:0:0,-68.0328,-723.172	0/0:219:218,1:218:7747:1:36:0,-62.3299,-693.441	0/1:296:212,83:212:7533:83:2918:-173.271,0,-588.848	0/0:370:366,4:366:12996:4:144:0,-98.0723,-1156.15	0/0:44:44,0:44:1560:0:0:0,-13.2453,-140.689	0/0:158:158,0:158:5613:0:0:0,-47.5627,-505.293	0/0:163:162,1:162:5745:1:36:0,-45.4696,-513.565	0/0:39:39,0:39:1392:0:0:0,-11.7402,-125.579	0/1:121:65,56:65:2323:56:2000:-143.059,0,-172.715	0/0:165:165,0:165:5884:0:0:0,-49.6699,-529.669	0/0:466:466,0:466:16605:0:0:0,-140.28,-1494.06	0/0:430:430,0:430:15321:0:0:0,-129.443,-1378.61	0/0:303:303,0:303:10761:0:0:0,-91.2121,-968.387	0/0:307:306,1:306:10809:1:36:0,-88.827,-969.124	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:352:352,0:352:12555:0:0:0,-105.963,-1129.78	0/1:266:178,88:178:6248:88:3105:-198.812,0,-482.073	0/1:429:277,152:277:9836:152:5367:-353.286,0,-756.044	0/0:201:200,1:200:7136:1:30:0,-57.5081,-639.297	0/0:102:102,0:102:3656:0:0:0,-30.7051,-329.244	0/1:123:77,46:77:2764:46:1583:-105.358,0,-211.974	0/1:191:127,64:127:4515:64:2235:-143.455,0,-349.021	0/0:91:91,0:91:3264:0:0:0,-27.3937,-293.979	0/1:108:61,47:61:2175:47:1688:-119.306,0,-163.496	0/1:109:68,41:68:2436:41:1440:-96.6522,0,-186.677	0/1:78:51,26:51:1832:26:913:-58.6847,0,-141.622	0/1:149:84,65:84:3003:65:2262:-158.176,0,-225.648	0/1:80:27,53:27:952:53:1811:-138.81,0,-61.9128	0/0:290:290,0:290:10308:0:0:0,-87.2987,-927.642	0/0:192:192,0:192:6816:0:0:0,-57.7978,-613.516
chr10	2130380	.	AAACAACCT	AAACCT	42152.4	PASS	AB=0.467441;ABP=59.2881;AC=50;AF=0.265957;AN=188;AO=2873;CIGAR=1M3D5M;DP=11530;DPB=10567;DPRA=1.05218;EPP=6215.62;EPPR=18314.3;GTI=0;LEN=3;MEANALT=1.69091;MQM=59.9781;MQMR=59.9939;NS=94;NUMALT=1;ODDS=8.81989;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96942;QR=299829;RO=8584;RPL=3;RPP=6215.62;RPPR=18314.3;RPR=2870;RUN=1;SAF=2873;SAP=6241.65;SAR=0;SRF=8584;SRP=18642.9;SRR=0;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:20,12:20:685:12:424:-28.8635,0,-52.3358	0/0:262:259,3:259:8966:3:93:0,-70.1931,-798.293	0/1:178:105,72:105:3679:72:2470:-168.906,0,-277.68	0/1:268:143,124:143:4993:124:4113:-289.622,0,-368.801	0/1:89:43,46:43:1526:46:1546:-112.627,0,-110.842	0/1:51:23,27:23:803:27:921:-67.824,0,-57.2156	0/1:118:66,52:66:2330:52:1742:-121.531,0,-174.441	0/1:104:49,55:49:1705:55:1910:-140.867,0,-122.427	0/1:79:48,31:48:1690:31:1019:-68.223,0,-128.605	0/1:104:65,39:65:2281:39:1361:-91.4792,0,-174.247	0/1:73:39,34:39:1354:34:1136:-80.5586,0,-100.184	0/1:66:34,32:34:1181:32:1091:-78.6239,0,-86.7271	0/0:57:57,0:57:1997:0:0:0,-17.1587,-180.004	0/0:77:77,0:77:2714:0:0:0,-23.1793,-244.507	0/0:59:57,0:57:2008:0:0:0,-17.1587,-180.635	0/0:80:80,0:80:2764:0:0:0,-24.0824,-249.008	0/1:43:22,21:22:767:21:725:-52.6234,0,-56.407	0/0:52:51,0:51:1788:0:0:0,-15.3525,-160.844	0/1:40:25,15:25:861:15:528:-35.8102,0,-65.7615	0/1:336:169,163:169:5869:163:5574:-401.491,0,-428.045	0/1:204:117,86:117:4104:86:2900:-199.757,0,-308.087	0/1:174:45,129:45:1575:129:4394:-343.259,0,-89.6614	0/0:47:46,0:46:1571:0:0:0,-13.8474,-141.318	0/0:83:77,6:77:2687:6:193:0,-7.29988,-224.393	0/1:57:21,35:21:739:35:1181:-89.4086,0,-49.6543	0/0:483:481,0:481:16715:0:0:0,-144.795,-1503.81	0/0:326:322,0:322:11205:0:0:0,-96.9317,-1008.06	0/1:15:8,5:8:286:5:176:-11.9141,0,-21.8128	0/1:462:249,212:249:8737:212:7042:-494.833,0,-647.326	0/1:198:113,84:113:3954:84:2827:-195.002,0,-296.401	0/0:124:124,0:124:4333:0:0:0,-37.3277,-390.159	0/0:13:12,0:12:416:0:0:0,-3.61236,-37.4123	0/1:36:14,22:14:502:22:742:-56.2536,0,-34.6802	0/0:29:29,0:29:1018:0:0:0,-8.72987,-91.9332	0/0:30:30,0:30:1039:0:0:0,-9.0309,-93.8192	0/0:26:26,0:26:903:0:0:0,-7.82678,-81.5847	0/0:168:168,0:168:5928:0:0:0,-50.573,-533.643	0/1:270:141,128:141:4913:128:4284:-304.4,0,-361.001	0/1:67:30,36:30:1063:36:1208:-88.9113,0,-75.8802	0/1:24:17,7:17:600:7:252:-15.8042,0,-47.1046	0/1:261:122,135:122:4247:135:4582:-334.887,0,-304.753	0/1:45:24,20:24:838:20:696:-49.3578,0,-62.1329	0/1:182:100,81:100:3489:81:2716:-189.834,0,-259.382	0/1:35:20,15:20:711:15:509:-35.5951,0,-53.7804	0/0:44:42,0:42:1459:0:0:0,-12.6433,-131.303	0/1:105:61,43:61:2155:43:1434:-97.6749,0,-162.553	0/0:167:166,0:166:5797:0:0:0,-49.971,-521.505	0/1:241:134,107:134:4705:107:3479:-240.769,0,-351.075	0/0:171:171,0:171:5981:0:0:0,-51.4761,-538.416	0/0:108:107,0:107:3727:0:0:0,-32.2102,-335.281	0/0:255:255,0:255:9011:0:0:0,-76.7626,-810.99	0/1:24:10,14:10:351:14:455:-34.0339,0,-24.7032	0/1:176:106,69:106:3732:69:2363:-159.885,0,-283.047	0/0:96:95,0:95:3300:0:0:0,-28.5978,-296.868	0/1:33:25,8:25:872:8:261:-13.874,0,-68.8628	0/0:212:211,0:211:7347:0:0:0,-63.5173,-660.945	0/1:23:10,13:10:351:13:430:-32.0916,0,-25.004	0/1:24:12,12:12:414:12:420:-30.9093,0,-30.3656	0/1:43:27,16:27:942:16:556:-37.4229,0,-72.1492	0/1:125:69,56:69:2392:56:1885:-132.289,0,-177.911	0/1:124:67,55:67:2359:55:1924:-136.359,0,-175.524	0/0:16:16,0:16:559:0:0:0,-4.81648,-50.639	0/1:308:169,136:169:5880:136:4511:-313.991,0,-437.158	0/0:317:314,0:314:10977:0:0:0,-94.5234,-987.546	0/0:87:86,0:86:3018:0:0:0,-25.8886,-271.644	0/0:140:140,0:140:4908:0:0:0,-42.1442,-441.885	0/1:191:87,103:87:3017:103:3364:-245.414,0,-214.213	0/0:242:234,4:234:8143:4:144:0,-58.6913,-719.604	0/0:45:42,2:42:1446:2:64:0,-7.51315,-124.341	0/0:132:131,0:131:4570:0:0:0,-39.4349,-411.119	0/0:97:97,0:97:3362:0:0:0,-29.1999,-302.804	0/0:53:53,0:53:1860:0:0:0,-15.9546,-167.681	0/1:146:76,69:76:2627:69:2331:-166.033,0,-192.672	0/0:79:79,0:79:2765:0:0:0,-23.7814,-249.095	0/0:275:273,0:273:9491:0:0:0,-82.1812,-853.83	0/0:182:182,0:182:6394:0:0:0,-54.7875,-575.566	0/0:124:123,0:123:4247:0:0:0,-37.0267,-382.066	0/0:44:44,0:44:1544:0:0:0,-13.2453,-139.253	0/0:32:32,0:32:1106:0:0:0,-9.63296,-99.8454	0/0:144:142,1:142:4972:1:36:0,-39.8088,-444.045	0/1:152:92,59:92:3215:59:1998:-134.309,0,-243.804	0/1:300:155,145:155:5435:145:4913:-352.015,0,-398.985	0/0:110:109,0:109:3807:0:0:0,-32.8123,-342.478	0/0:63:63,0:63:2225:0:0:0,-18.9649,-200.516	0/1:58:28,29:28:970:29:1016:-74.2335,0,-70.0908	0/1:95:53,42:53:1853:42:1410:-98.5924,0,-138.452	0/0:36:35,0:35:1226:0:0:0,-10.536,-110.285	0/1:68:34,34:34:1197:34:1155:-83.7769,0,-87.5648	0/1:54:27,27:27:952:27:930:-67.7526,0,-69.74	0/1:65:37,26:37:1301:26:902:-62.1666,0,-98.0671	0/1:97:49,44:49:1718:44:1525:-109.238,0,-126.604	0/1:49:17,32:17:585:32:1081:-82.8394,0,-38.224	0/0:158:157,0:157:5493:0:0:0,-47.2617,-493.784	0/0:73:72,0:72:2537:0:0:0,-21.6742,-228.225
chr10	2185403	.	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chr10	2583296	.	T	A	58747.4	PASS	AB=0.499928;ABP=3.01061;AC=49;AF=0.260638;AN=188;AO=3463;CIGAR=1X;DP=12082;DPB=12082;DPRA=1.34834;EPP=7522.82;EPPR=18710.2;GTI=2;LEN=1;MEANALT=1.05556;MQM=59.9833;MQMR=59.9979;NS=94;NUMALT=1;ODDS=0.449136;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=124055;QR=304035;RO=8615;RPL=3463;RPP=7522.82;RPPR=18710.2;RPR=0;RUN=1;SAF=0;SAP=7522.82;SAR=3463;SRF=0;SRP=18710.2;SRR=8615;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:23:13,10:13:445:10:360:-25.8206,0,-33.4517	0/0:175:175,0:175:6193:0:0:0,-52.6802,-557.467	0/1:161:73,88:73:2514:88:3140:-234.358,0,-178.04	0/1:382:183,199:183:6445:199:7138:-527.481,0,-465.148	0/1:95:47,48:47:1653:48:1724:-126.848,0,-120.458	0/1:51:20,31:20:716:31:1101:-84.0458,0,-49.4152	0/1:242:122,120:122:4306:120:4263:-310.999,0,-314.87	0/1:166:86,80:86:3042:80:2880:-209.465,0,-224.038	0/1:97:52,45:52:1822:45:1616:-116.53,0,-135.057	0/1:107:59,48:59:2078:48:1716:-122.515,0,-155.077	0/1:39:21,18:21:741:18:644:-46.5504,0,-55.2714	0/1:93:46,47:46:1611:47:1692:-124.571,0,-117.277	0/0:81:81,0:81:2876:0:0:0,-24.3834,-259.078	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.684	0/0:80:80,0:80:2826:0:0:0,-24.0824,-254.577	0/0:66:66,0:66:2345:0:0:0,-19.868,-211.308	0/0:41:41,0:41:1461:0:0:0,-12.3422,-131.784	0/0:61:61,0:61:2149:0:0:0,-18.3628,-193.676	0/1:32:10,22:10:356:22:792:-61.9727,0,-22.7483	0/1:359:205,154:205:7204:154:5514:-388.316,0,-540.348	0/1:206:108,98:108:3811:98:3499:-253.109,0,-281.175	0/1:293:90,203:90:3167:203:7287:-567.676,0,-197.051	0/0:110:110,0:110:3834:0:0:0,-33.1133,-345.255	0/1:74:62,12:62:2197:12:432:-16.945,0,-175.718	0/1:86:51,35:51:1805:35:1260:-87.8169,0,-136.841	0/0:439:439,0:439:15514:0:0:0,-132.152,-1395.97	0/0:296:296,0:296:10531:0:0:0,-89.1049,-947.709	0/1:46:22,24:22:788:24:855:-63.4236,0,-57.3974	0/1:511:262,249:262:9292:249:8939:-650.661,0,-682.426	0/1:76:38,38:38:1322:38:1364:-100.182,0,-96.3972	0/0:163:163,0:163:5744:0:0:0,-49.0679,-517.08	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:31:16,15:16:545:15:540:-39.6046,0,-40.039	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:206:205,1:205:7300:1:36:0,-58.4139,-653.458	0/1:325:157,167:157:5523:167:5977:-440.012,0,-399.301	0/1:32:15,17:15:532:17:612:-45.7805,0,-38.5801	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:201:112,89:112:3982:89:3166:-224.655,0,-298.062	0/1:38:25,13:25:888:13:464:-30.6584,0,-68.7999	0/1:248:110,138:110:3894:138:4956:-370.906,0,-275.999	0/1:77:38,39:38:1345:39:1400:-103.12,0,-98.1688	0/0:65:65,0:65:2255:0:0:0,-19.5669,-203.21	0/1:129:80,49:80:2864:49:1756:-119.491,0,-219.164	0/0:199:199,0:199:7034:0:0:0,-59.905,-633.123	0/1:279:138,141:138:4872:141:5014:-367.42,0,-354.646	0/0:181:181,0:181:6325:0:0:0,-54.4864,-569.345	0/0:151:151,0:151:5351:0:0:0,-45.4555,-481.724	0/0:221:221,0:221:7798:0:0:0,-66.5276,-701.854	0/1:13:4,9:4:144:9:324:-25.5925,0,-9.40023	0/1:226:113,112:113:3977:112:4012:-293.325,0,-290.175	0/0:39:39,0:39:1361:0:0:0,-11.7402,-122.784	0/1:23:8,15:8:284:15:536:-41.6511,0,-18.9797	0/0:174:173,0:173:6052:0:0:0,-52.0782,-544.426	0/1:68:38,30:38:1326:30:1080:-77.0432,0,-99.1656	0/1:11:3,8:3:93:8:288:-22.9561,0,-5.3654	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	0/1:56:31,25:31:1112:25:900:-64.4633,0,-83.5337	0/1:91:40,51:40:1421:51:1836:-138.127,0,-100.792	0/0:11:11,0:11:377:0:0:0,-3.31133,-34.2579	0/1:387:174,212:174:6107:212:7601:-567.69,0,-433.305	0/0:196:195,1:195:6853:1:36:0,-55.4036,-613.247	0/0:74:74,0:74:2614:0:0:0,-22.2762,-235.506	0/0:186:186,0:186:6559:0:0:0,-55.9916,-590.392	0/1:301:167,134:167:5824:134:4812:-342.624,0,-433.667	0/0:134:134,0:134:4690:0:0:0,-40.338,-422.175	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:175:174,1:174:6133:1:36:0,-49.082,-548.474	0/0:102:102,0:102:3656:0:0:0,-30.7051,-329.244	0/0:7:7,0:7:237:0:0:0,-2.10721,-21.6591	0/1:104:50,54:50:1735:54:1929:-142.578,0,-125.121	0/0:69:69,0:69:2437:0:0:0,-20.7711,-219.585	0/0:136:136,0:136:4807:0:0:0,-40.9401,-432.787	0/0:303:303,0:303:10691:0:0:0,-91.2121,-962.106	0/0:122:122,0:122:4365:0:0:0,-36.7257,-393.023	0/0:88:88,0:88:3106:0:0:0,-26.4906,-279.767	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:211:210,1:210:7350:1:36:0,-59.9191,-657.955	0/1:218:109,109:109:3809:109:3911:-286.557,0,-277.382	0/1:410:228,182:228:7996:182:6494:-461.121,0,-596.24	0/0:94:94,0:94:3364:0:0:0,-28.2968,-302.976	0/0:57:57,0:57:2021:0:0:0,-17.1587,-182.161	0/1:97:46,51:46:1648:51:1832:-135.961,0,-119.409	0/1:143:68,75:68:2413:75:2700:-200.196,0,-174.378	0/0:47:47,0:47:1673:0:0:0,-14.1484,-150.855	0/1:77:34,43:34:1216:43:1548:-116.434,0,-86.5673	0/1:61:26,35:26:932:35:1243:-93.811,0,-65.836	0/1:14:8,6:8:284:6:212:-15.2104,0,-21.6889	0/1:46:23,23:23:820:23:824:-60.6359,0,-60.2751	0/1:59:17,42:17:604:42:1512:-118.614,0,-36.9298	0/0:202:202,0:202:7131:0:0:0,-60.8081,-641.848	0/0:93:92,1:92:3281:1:36:0,-24.3975,-291.911
chr10	2777154	.	G	A	170811	PASS	AB=0.514004;ABP=12.863;AC=140;AF=0.744681;AN=188;AO=8175;CIGAR=1X;DP=10989;DPB=10989;DPRA=0;EPP=17746.1;EPPR=6080.99;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9911;MQMR=60;NS=94;NUMALT=1;ODDS=5.9481;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=291673;QR=100270;RO=2811;RPL=1;RPP=17746.1;RPPR=6080.99;RPR=8174;RUN=1;SAF=8175;SAP=17754.8;SAR=0;SRF=2811;SRP=6107.02;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:55:27,28:27:960:28:978:-71.772,0,-70.1596	1/1:117:0,117:0:0:117:4152:-373.861,-35.2205,0	0/1:252:126,126:126:4486:126:4513:-330.476,0,-328.048	0/1:223:99,124:99:3503:124:4433:-332.01,0,-248.349	0/1:79:37,39:37:1332:39:1385:-101.709,0,-96.9443	0/1:49:22,27:22:784:27:972:-73.0474,0,-56.1334	0/1:114:62,52:62:2201:52:1864:-133.722,0,-164.036	0/1:169:64,105:64:2288:105:3772:-288.804,0,-155.308	0/1:101:39,62:39:1389:62:2206:-168.399,0,-94.9029	0/1:77:34,43:34:1190:43:1510:-113.009,0,-84.2217	0/1:110:63,47:63:2222:47:1688:-119.094,0,-167.128	0/1:126:48,78:48:1724:78:2802:-214.489,0,-117.516	1/1:101:0,101:0:0:101:3628:-326.724,-30.404,0	1/1:136:0,136:0:0:136:4841:-435.842,-40.9401,0	1/1:95:0,95:0:0:95:3401:-306.304,-28.5979,0	1/1:68:0,68:0:0:68:2444:-220.215,-20.47,0	1/1:51:0,51:0:0:51:1832:-165.161,-15.3525,0	1/1:33:0,33:0:0:33:1173:-105.876,-9.93399,0	0/1:58:29,29:29:1040:29:1044:-76.8151,0,-76.4546	0/1:196:94,102:94:3338:102:3656:-270.241,0,-241.634	0/1:149:88,61:88:3111:61:2188:-152.332,0,-235.361	0/1:116:77,39:77:2772:39:1400:-91.3797,0,-214.801	1/1:125:0,125:0:0:125:4480:-403.368,-37.6288,0	0/1:61:6,55:6:216:55:1946:-157.049,0,-1.42768	0/1:128:56,72:56:1989:72:2550:-191.216,0,-140.751	1/1:254:0,254:0:0:254:9051:-814.563,-76.4616,0	1/1:523:0,523:0:0:523:18376:-1653.43,-157.439,0	0/1:36:19,17:19:669:17:612:-44.5764,0,-49.6969	0/1:374:182,192:182:6517:192:6836:-502.717,0,-474.026	0/1:172:80,92:80:2816:92:3300:-245.441,0,-201.897	1/1:113:0,113:0:0:113:4026:-362.527,-34.0164,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:34:10,24:10:360:24:858:-67.3062,0,-22.5093	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:29:0,29:0:0:29:1044:-94.2748,-8.72987,0	1/1:215:0,215:0:0:215:7652:-688.714,-64.7215,0	0/1:131:70,61:70:2516:61:2181:-157.119,0,-187.257	0/1:69:34,35:34:1220:35:1256:-92.5742,0,-89.3357	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	0/1:191:68,123:68:2440:123:4408:-339.395,0,-162.358	0/1:43:23,20:23:824:20:720:-52.1845,0,-61.539	0/1:225:105,120:105:3760:120:4286:-318.183,0,-270.868	0/1:61:34,27:34:1220:27:972:-69.4351,0,-91.744	1/1:58:0,58:0:0:58:2088:-188.19,-17.4597,0	0/1:94:48,46:48:1728:46:1651:-120.582,0,-127.508	1/1:180:0,180:0:0:180:6421:-577.976,-54.1854,0	0/1:172:77,95:77:2760:95:3371:-251.825,0,-196.864	1/1:99:0,99:0:0:99:3548:-319.528,-29.802,0	1/1:204:1,203:1:36:203:7225:-646.702,-57.8118,0	1/1:123:0,123:0:0:123:4412:-397.251,-37.0267,0	0/1:14:3,11:3:108:11:392:-31.4056,0,-5.86075	0/1:220:118,102:118:4214:102:3634:-261.036,0,-313.211	1/1:103:0,103:0:0:103:3670:-330.501,-31.0061,0	0/1:19:8,11:8:288:11:381:-28.9011,0,-20.5478	1/1:181:2,179:2:68:179:6377:-567.56,-48.0287,0	0/1:34:18,16:18:648:16:576:-41.94,0,-48.4169	0/1:21:14,7:14:500:7:233:-14.9727,0,-39.0145	0/1:41:17,24:17:608:24:864:-65.7357,0,-42.7098	0/1:95:63,32:63:2256:32:1109:-71.5148,0,-174.705	0/1:136:69,67:69:2465:67:2408:-176.036,0,-181.162	1/1:6:0,6:0:0:6:197:-18.0513,-1.80618,0	0/1:182:80,102:80:2831:102:3653:-274.185,0,-200.237	1/1:214:0,214:0:0:214:7660:-689.433,-64.4204,0	1/1:97:0,97:0:0:97:3447:-310.439,-29.1999,0	1/1:158:0,158:0:0:158:5676:-510.957,-47.5627,0	0/1:156:55,101:55:1961:101:3572:-274.723,0,-129.803	1/1:228:0,228:0:0:228:8145:-733.062,-68.6348,0	1/1:90:0,90:0:0:90:3218:-289.841,-27.0927,0	1/1:52:0,52:0:0:52:1872:-168.759,-15.6536,0	1/1:59:0,59:0:0:59:2105:-189.717,-17.7608,0	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	0/1:156:89,67:89:3181:67:2397:-169.012,0,-239.552	1/1:109:0,109:0:0:109:3890:-350.291,-32.8123,0	1/1:118:0,118:0:0:118:4216:-379.621,-35.5215,0	1/1:191:0,191:0:0:191:6845:-616.117,-57.4967,0	1/1:182:0,182:0:0:182:6475:-582.835,-54.7875,0	1/1:159:0,159:0:0:159:5652:-508.798,-47.8638,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:105:0,105:0:0:105:3755:-338.15,-31.6082,0	0/1:126:60,66:60:2114:66:2353:-174.097,0,-152.596	0/1:250:136,114:136:4838:114:4065:-290.779,0,-360.316	1/1:57:0,57:0:0:57:2052:-184.523,-17.1587,0	1/1:114:0,114:0:0:114:4070:-366.485,-34.3174,0	1/1:40:0,40:0:0:40:1408:-127.013,-12.0412,0	0/1:136:70,66:70:2512:66:2376:-173.157,0,-185.392	1/1:29:0,29:0:0:29:1044:-94.2748,-8.72987,0	0/1:88:58,30:58:2069:30:1080:-71.0226,0,-159.988	0/1:93:51,42:51:1836:42:1512:-108.379,0,-137.525	0/1:103:63,40:63:2253:40:1425:-97.5394,0,-172.025	0/1:182:76,106:76:2728:106:3805:-287.859,0,-190.975	0/1:67:39,28:39:1381:28:1004:-70.5069,0,-104.418	1/1:214:0,214:0:0:214:7612:-685.117,-64.4204,0	1/1:88:0,88:0:0:88:3164:-284.984,-26.4906,0
chr10	2965490	.	T	C	40250.9	PASS	AB=0.507222;ABP=5.14303;AC=47;AF=0.25;AN=188;AO=2404;CIGAR=1X;DP=9085;DPB=9085;DPRA=1.18676;EPP=5223.23;EPPR=14421.7;GTI=0;LEN=1;MEANALT=1.10909;MQM=59.9813;MQMR=59.9985;NS=94;NUMALT=1;ODDS=2.58036;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=85669;QR=239090;RO=6672;RPL=0;RPP=5223.23;RPPR=14421.7;RPR=2404;RUN=1;SAF=2404;SAP=5223.23;SAR=0;SRF=6672;SRP=14491.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:48:20,27:20:716:27:964:-72.7132,0,-50.4023	0/0:126:125,1:125:4480:1:36:0,-34.3315,-399.771	0/1:127:57,70:57:2040:70:2491:-186.212,0,-145.641	0/1:167:83,84:83:2956:84:2970:-217.262,0,-216	0/1:70:35,35:35:1248:35:1255:-92.1827,0,-91.5528	0/1:50:32,18:32:1144:18:648:-43.6004,0,-88.218	0/1:105:37,68:37:1324:68:2432:-187.527,0,-87.8539	0/1:120:58,62:58:2075:62:2207:-162.77,0,-150.896	0/1:75:30,45:30:1080:45:1572:-119.19,0,-74.936	0/1:117:65,52:65:2320:52:1864:-132.819,0,-173.84	0/1:78:42,36:42:1500:36:1266:-90.7608,0,-111.814	0/1:72:28,44:28:995:44:1559:-118.927,0,-68.1899	0/0:67:67,0:67:2399:0:0:0,-20.169,-216.166	0/0:126:126,0:126:4524:0:0:0,-37.9298,-407.326	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.311	0/0:79:79,0:79:2840:0:0:0,-23.7814,-255.838	0/1:55:25,30:25:896:30:1072:-80.2358,0,-64.4037	0/1:195:99,95:99:3548:95:3407:-248.084,0,-260.769	0/1:120:61,58:61:2188:58:2052:-148.892,0,-161.129	0/1:145:51,94:51:1832:94:3333:-256.53,0,-121.511	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:100:92,8:92:3299:8:288:0,-3.83559,-270.86	0/1:64:36,28:36:1279:28:994:-70.5085,0,-96.1465	0/0:262:262,0:262:9392:0:0:0,-78.8699,-845.241	0/0:172:172,0:172:6155:0:0:0,-51.7772,-554.049	0/1:25:15,10:15:540:10:360:-25.2186,0,-41.4108	0/1:229:93,136:93:3324:136:4868:-369.337,0,-230.443	0/1:173:103,70:103:3708:70:2495:-172.724,0,-281.842	0/0:125:125,0:125:4480:0:0:0,-37.6287,-403.369	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:17:6,11:6:216:11:392:-30.5025,0,-14.673	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:211:211,0:211:7564:0:0:0,-63.5173,-680.798	0/1:259:120,139:120:4320:139:4939:-366.694,0,-311.007	0/1:85:42,43:42:1508:43:1532:-112.586,0,-110.427	0/1:6:5,1:5:176:1:36:-1.79209,0,-14.3788	0/1:112:64,47:64:2296:47:1659:-115.975,0,-173.28	0/1:39:22,17:22:788:17:612:-43.6733,0,-59.5046	0/1:130:59,71:59:2109:71:2521:-188.007,0,-150.943	0/1:48:29,19:29:1036:19:684:-47.4409,0,-79.1045	0/0:54:53,0:53:1900:0:0:0,-15.9546,-170.918	0/1:91:44,47:44:1580:47:1684:-124.453,0,-115.098	0/0:96:96,0:96:3427:0:0:0,-28.8989,-308.644	0/1:137:62,75:62:2232:75:2651:-197.596,0,-159.902	0/0:91:91,0:91:3259:0:0:0,-27.3937,-293.53	0/0:127:126,0:126:4512:0:0:0,-37.9298,-406.037	0/0:181:180,1:180:6432:1:36:0,-50.8882,-575.368	0/1:9:7,2:7:252:2:72:-4.12745,0,-20.3197	0/1:169:75,94:75:2687:94:3380:-253.54,0,-191.2	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.767	0/1:23:14,8:14:504:8:288:-19.2849,0,-38.7156	0/0:138:136,2:136:4875:2:72:0,-34.7054,-432.065	0/1:35:14,21:14:500:21:752:-57.4702,0,-34.8001	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/1:23:14,9:14:504:9:320:-22.2187,0,-38.7744	0/1:94:53,41:53:1892:41:1463:-103.668,0,-142.261	0/1:181:85,96:85:3052:96:3439:-255.236,0,-220.422	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:148:71,77:71:2547:77:2730:-201.391,0,-184.924	0/0:151:151,0:151:5400:0:0:0,-45.4555,-486.131	0/0:83:83,0:83:2967:0:0:0,-24.9855,-267.263	0/0:87:87,0:87:3116:0:0:0,-26.1896,-280.667	0/1:146:74,72:74:2634:72:2567:-187.327,0,-193.354	0/0:181:180,1:180:6449:1:36:0,-50.8882,-576.895	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/0:92:92,0:92:3292:0:0:0,-27.6948,-296.499	0/0:112:112,0:112:4020:0:0:0,-33.7154,-361.988	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:107:107,0:107:3806:0:0:0,-32.2102,-342.739	0/0:44:43,1:43:1540:1:36:0,-9.64704,-135.295	0/0:145:144,0:144:5172:0:0:0,-43.3483,-465.387	0/0:127:127,0:127:4564:0:0:0,-38.2308,-410.924	0/0:106:105,1:105:3760:1:36:0,-28.3109,-335.001	0/0:103:102,1:102:3645:1:36:0,-27.4078,-324.655	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/1:108:61,47:61:2175:47:1688:-119.696,0,-163.505	0/1:195:92,103:92:3295:103:3665:-271.353,0,-238.068	0/0:142:142,0:142:5099:0:0:0,-42.7463,-459.051	0/0:77:77,0:77:2772:0:0:0,-23.1793,-249.72	0/0:82:82,0:82:2948:0:0:0,-24.6845,-265.553	0/1:141:82,58:82:2948:58:2076:-144.607,0,-223.049	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.613	0/1:57:32,25:32:1139:25:896:-63.8016,0,-85.6597	0/1:71:37,34:37:1324:34:1224:-89.0906,0,-98.089	0/1:102:57,45:57:2052:45:1608:-114.305,0,-154.246	0/1:186:97,89:97:3484:89:3180:-230.431,0,-257.779	0/1:54:23,31:23:811:31:1082:-81.4316,0,-57.0543	0/0:116:116,0:116:4168:0:0:0,-34.9195,-375.299	0/0:105:105,0:105:3780:0:0:0,-31.6081,-340.397
chr10	3259139	.	A	T	587807	PASS	AB=0.606191;ABP=911.08;AC=147;AF=0.781915;AN=188;AO=21914;CIGAR=1X;DP=25651;DPB=25651;DPRA=0;EPP=47580;EPPR=8083.06;GTI=2;LEN=1;MEANALT=1.15957;MQM=59.9764;MQMR=59.9868;NS=94;NUMALT=1;ODDS=14.9426;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=778207;QR=132366;RO=3721;RPL=15092;RPP=6780.11;RPPR=84.2021;RPR=6822;RUN=1;SAF=15091;SAP=6776.83;SAR=6823;SRF=1674;SRP=84.2021;SRR=2047;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:110:56,54:56:1994:54:1936:-141.401,0,-146.619	1/1:176:0,176:0:0:176:6252:-562.775,-52.9813,0	1/1:237:1,236:1:36:236:8435:-755.466,-67.7458,0	0/1:392:184,208:184:6558:208:7407:-548.675,0,-472.298	0/1:192:78,114:78:2804:114:4083:-309.857,0,-194.801	0/1:121:46,74:46:1629:74:2637:-201.092,0,-110.414	0/1:245:86,159:86:3084:159:5644:-434.328,0,-204.035	0/1:250:115,134:115:4080:134:4784:-355.399,0,-292.071	0/1:188:92,96:92:3265:96:3440:-253.219,0,-237.477	0/1:181:93,88:93:3287:88:3118:-226.361,0,-241.563	0/1:353:54,298:54:1914:298:10494:-838.068,0,-66.2137	0/1:148:66,81:66:2368:81:2896:-216.265,0,-168.767	1/1:147:0,147:0:0:147:5176:-465.983,-44.2514,0	1/1:150:0,150:0:0:150:5347:-481.364,-45.1545,0	1/1:131:0,131:0:0:131:4654:-419.023,-39.4349,0	1/1:115:1,113:1:32:113:3996:-356.608,-31.458,0	1/1:100:1,99:1:36:99:3514:-312.873,-26.5047,0	1/1:92:0,91:0:0:91:3231:-290.693,-27.3937,0	0/1:199:39,160:39:1395:160:5693:-452.583,0,-65.9434	0/1:322:112,210:112:3996:210:7480:-576.31,0,-262.897	0/1:239:94,145:94:3342:145:5125:-389.448,0,-229.052	0/1:110:78,32:78:2773:32:1148:-70.5165,0,-216.697	1/1:255:0,255:0:0:255:9113:-820.083,-76.7627,0	1/1:195:3,191:3:108:191:6739:-596.545,-48.5721,0	0/1:213:94,119:94:3349:119:4227:-316.491,0,-237.507	1/1:532:0,532:0:0:532:18934:-1703.44,-160.148,0	1/1:559:0,559:0:0:559:19892:-1789.81,-168.276,0	0/1:69:29,40:29:1025:40:1408:-106.243,0,-71.7896	0/1:419:183,236:183:6494:236:8412:-630.953,0,-458.414	0/1:179:57,122:57:2023:122:4327:-335.562,0,-128.458	1/1:261:0,261:0:0:261:9307:-837.598,-78.5688,0	1/1:930:0,930:0:0:930:33037:-2972.31,-279.958,0	1/1:183:6,177:6:216:177:6299:-547.215,-35.298,0	1/1:1014:0,1014:0:0:1014:35871:-3227.26,-305.244,0	1/1:1093:0,1092:0:0:1092:38701:-3481.38,-328.725,0	1/1:483:1,482:1:32:482:17102:-1535.63,-142.198,0	1/1:348:0,348:0:0:348:12306:-1107.39,-104.758,0	0/1:168:83,85:83:2960:85:3024:-221.819,0,-216.061	0/1:352:58,292:58:2062:292:10285:-819.844,0,-80.1297	1/1:192:4,188:4:140:188:6671:-587.525,-44.8532,0	0/1:242:106,136:106:3768:136:4840:-362.901,0,-266.47	0/1:176:24,152:24:843:152:5401:-433.241,0,-23.2067	0/1:218:98,120:98:3495:120:4270:-318.798,0,-249.081	0/1:129:67,62:67:2395:62:2208:-160.15,0,-176.974	1/1:98:0,97:0:0:97:3418:-307.474,-29.1999,0	0/1:257:104,153:104:3708:153:5442:-412.541,0,-256.559	1/1:178:2,176:2:72:176:6236:-554.13,-46.7466,0	0/1:242:107,135:107:3781:135:4815:-360.655,0,-267.64	1/1:124:0,124:0:0:124:4404:-396.529,-37.3277,0	1/1:202:0,202:0:0:202:7222:-650.033,-60.8081,0	0/1:223:93,130:93:3298:130:4625:-349.285,0,-229.908	1/1:496:6,490:6:216:490:17290:-1535.96,-129.52,0	0/1:207:90,116:90:3206:116:4128:-309.333,0,-226.391	1/1:186:0,186:0:0:186:6628:-596.601,-55.9916,0	1/1:489:3,485:3:108:485:17080:-1526.79,-137.187,0	1/1:332:1,330:1:36:330:11704:-1049.6,-96.4025,0	0/1:111:44,67:44:1568:67:2377:-180.772,0,-107.997	1/1:406:2,404:2:72:404:14382:-1287.3,-115.381,0	1/1:446:8,438:8:288:438:15529:-1371.06,-107.992,0	0/1:175:70,105:70:2491:105:3749:-284.928,0,-171.763	0/1:180:90,90:90:3200:90:3200:-234.037,0,-234.037	1/1:456:0,456:0:0:456:16150:-1453.19,-137.27,0	0/1:250:164,86:164:5883:86:3060:-200.368,0,-454.32	1/1:278:1,277:1:36:277:9864:-884.11,-80.0881,0	0/1:114:64,50:64:2287:50:1764:-124.723,0,-171.704	1/1:209:0,209:0:0:209:7420:-667.849,-62.9153,0	0/1:286:148,137:148:5242:137:4893:-354.368,0,-385.748	1/1:171:2,169:2:72:169:6035:-536.418,-44.6394,0	1/1:512:0,512:0:0:512:18197:-1637.33,-154.127,0	1/1:110:0,110:0:0:110:3916:-352.633,-33.1133,0	1/1:125:0,125:0:0:125:4451:-400.762,-37.6288,0	1/1:505:0,505:0:0:505:17999:-1619.52,-152.02,0	1/1:169:0,168:0:0:168:5963:-536.455,-50.573,0	1/1:146:0,146:0:0:146:5176:-465.978,-43.9504,0	1/1:356:0,356:0:0:356:12633:-1136.76,-107.167,0	1/1:315:0,315:0:0:315:11235:-1011.03,-94.8245,0	1/1:234:0,234:0:0:234:8363:-752.674,-70.441,0	1/1:194:1,193:1:36:193:6888:-616.331,-54.8015,0	1/1:1152:1,1151:1:36:1151:40835:-3670.23,-343.188,0	1/1:231:0,231:0:0:231:8248:-742.33,-69.5379,0	0/1:245:99,146:99:3512:146:5194:-393.847,0,-242.538	0/1:359:144,215:144:5122:215:7668:-582.082,0,-353.052	1/1:157:0,157:0:0:157:5534:-498.187,-47.2617,0	1/1:111:0,111:0:0:111:3967:-357.221,-33.4143,0	1/1:145:0,145:0:0:145:5163:-464.811,-43.6494,0	0/1:280:132,148:132:4706:148:5286:-391.587,0,-339.412	1/1:58:0,58:0:0:58:2062:-185.85,-17.4597,0	0/1:154:66,88:66:2333:88:3121:-234.758,0,-163.868	0/1:137:71,66:71:2498:66:2347:-170.246,0,-183.83	1/1:374:34,340:34:1203:340:12061:-976.773,-4.01018,0	0/1:697:71,626:71:2526:626:22157:-1783.76,0,-17.773	0/1:139:94,45:94:3327:45:1579:-100.553,0,-257.804	1/1:21:0,21:0:0:21:756:-68.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chr10	3271784	.	G	A	135490	PASS	AB=0.508222;ABP=9.86617;AC=48;AF=0.255319;AN=188;AO=5968;CIGAR=1X;DP=22744;DPB=22744;DPRA=1.42935;EPP=12962.4;EPPR=36403.4;GTI=0;LEN=1;MEANALT=1.06667;MQM=59.9886;MQMR=59.9944;NS=94;NUMALT=1;ODDS=3.92975;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212709;QR=591010;RO=16771;RPL=2356;RPP=577.001;RPPR=1376.52;RPR=3612;RUN=1;SAF=2356;SAP=577.001;SAR=3612;SRF=6759;SRP=1373.15;SRR=10012;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:118:48,70:48:1699:70:2501:-189.819,0,-117.674	0/0:353:351,2:351:12318:2:72:0,-99.4269,-1100.46	0/0:383:383,0:383:13561:0:0:0,-115.294,-1220.29	0/1:591:284,306:284:10048:306:10887:-801.767,0,-726.295	0/1:356:178,178:178:6251:178:6350:-464.426,0,-455.523	0/1:78:47,31:47:1662:31:1112:-76.911,0,-126.386	0/1:285:141,144:141:4930:144:5147:-377.533,0,-358.064	0/1:348:179,169:179:6307:169:6003:-435.62,0,-462.972	0/1:309:137,172:137:4813:172:6100:-455.998,0,-340.308	0/1:216:94,122:94:3324:122:4320:-323.953,0,-234.356	0/1:144:61,83:61:2133:83:2959:-223.194,0,-148.886	0/1:242:117,125:117:4064:125:4462:-328.901,0,-293.1	0/0:189:189,0:189:6690:0:0:0,-56.8947,-602.183	0/0:190:190,0:190:6656:0:0:0,-57.1957,-599.129	0/0:174:174,0:174:6125:0:0:0,-52.3792,-551.356	0/0:164:164,0:164:5810:0:0:0,-49.3689,-523.017	0/0:140:140,0:140:4929:0:0:0,-42.1442,-443.763	0/0:120:119,1:119:4158:1:36:0,-32.5253,-370.809	0/1:91:43,48:43:1490:48:1724:-128.052,0,-106.995	0/1:446:223,223:223:7825:223:7991:-584.949,0,-570.032	0/1:352:158,194:158:5534:194:6904:-515.468,0,-392.231	0/1:236:83,153:83:2940:153:5461:-420.575,0,-193.791	0/0:285:285,0:285:10115:0:0:0,-85.7935,-910.29	0/0:303:290,12:290:10274:12:423:0,-52.8652,-886.19	0/1:283:151,132:151:5340:132:4704:-338.33,0,-395.547	0/0:710:709,1:709:25005:1:36:0,-210.133,-2246.2	0/0:648:645,3:645:22795:3:108:0,-184.992,-2040.9	0/1:95:44,51:44:1515:51:1824:-135.843,0,-108.041	0/1:530:254,276:254:9055:276:9868:-728.515,0,-655.386	0/1:244:142,102:142:5000:102:3637:-254.083,0,-376.698	0/0:247:244,2:244:8624:2:72:0,-67.5499,-769.337	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:23:14,9:14:504:9:324:-22.5822,0,-38.7744	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:489:489,0:489:17153:0:0:0,-147.204,-1543.44	0/1:339:176,163:176:6182:163:5780:-418.269,0,-454.435	0/1:123:50,73:50:1775:73:2600:-197.223,0,-123.006	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:403:230,173:230:8098:173:6167:-433.813,0,-607.534	0/1:92:47,45:47:1641:45:1604:-116.955,0,-120.278	0/1:376:198,178:198:6929:178:6348:-458.225,0,-510.498	0/1:217:117,100:117:4106:100:3566:-255.824,0,-304.406	0/0:173:173,0:173:6071:0:0:0,-52.0782,-546.502	0/1:222:112,110:112:3980:110:3928:-286.846,0,-291.562	0/0:323:322,0:322:11357:0:0:0,-96.9317,-1021.75	0/1:451:226,225:226:7964:225:8017:-585.788,0,-581.029	0/0:279:279,0:279:9840:0:0:0,-83.9874,-885.559	0/0:392:390,2:390:13768:2:72:0,-111.167,-1232.08	0/1:350:165,185:165:5837:185:6626:-491.057,0,-420.086	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:352:187,165:187:6655:165:5900:-425.145,0,-493.07	0/0:127:127,0:127:4488:0:0:0,-38.2308,-404.093	0/1:25:12,13:12:432:13:449:-33.2117,0,-31.6954	0/0:305:305,0:305:10684:0:0:0,-91.8141,-961.492	0/1:123:53,70:53:1874:70:2499:-188.136,0,-131.911	0/1:16:5,11:5:180:11:381:-29.8042,0,-11.7356	0/1:17:9,8:9:315:8:288:-21.1499,0,-23.5697	0/1:241:123,118:123:4347:118:4197:-305.363,0,-318.859	0/1:244:104,140:104:3655:140:4990:-375.797,0,-255.703	0/0:10:10,0:10:341:0:0:0,-3.0103,-31.0178	0/1:488:225,263:225:7917:263:9388:-697.982,0,-565.662	0/0:496:494,2:494:17418:2:72:0,-142.474,-1560.43	0/1:145:83,62:83:2902:62:2198:-154.435,0,-217.764	0/0:207:207,0:207:7318:0:0:0,-62.3132,-658.676	0/1:369:192,177:192:6723:177:6308:-456.731,0,-494.077	0/0:304:303,1:303:10674:1:36:0,-87.9148,-956.983	0/0:113:113,0:113:3953:0:0:0,-34.0164,-355.963	0/0:171:171,0:171:6011:0:0:0,-51.4761,-541.101	0/0:163:163,0:163:5749:0:0:0,-49.0679,-517.532	0/0:48:48,0:48:1704:0:0:0,-14.4494,-153.646	0/0:231:230,1:230:8112:1:36:0,-65.9397,-726.505	0/0:190:190,0:190:6693:0:0:0,-57.1957,-602.453	0/0:453:453,0:453:16023:0:0:0,-136.367,-1441.64	0/0:480:479,1:479:16815:1:36:0,-140.896,-1509.44	0/0:240:240,0:240:8519:0:0:0,-72.2472,-766.714	0/0:327:321,6:321:11329:6:216:0,-78.6751,-999.745	0/0:26:26,0:26:923:0:0:0,-7.82678,-83.3868	0/0:279:279,0:279:9764:0:0:0,-83.9874,-878.725	0/1:247:115,132:115:4063:132:4713:-349.974,0,-291.504	0/1:595:314,281:314:11077:281:10008:-721.545,0,-817.724	0/0:188:188,0:188:6590:0:0:0,-56.5936,-593.188	0/0:178:178,0:178:6263:0:0:0,-53.5833,-563.773	0/0:208:208,0:208:7236:0:0:0,-62.6142,-651.31	0/1:381:193,188:193:6735:188:6682:-486.769,0,-491.507	0/0:96:96,0:96:3420:0:0:0,-28.8989,-308.015	0/1:177:90,87:90:3165:87:3106:-226.484,0,-231.792	0/1:198:101,96:101:3571:96:3409:-247.402,0,-261.978	0/1:103:56,47:56:2008:47:1688:-121.201,0,-149.987	0/1:185:89,96:89:3095:96:3420:-252.324,0,-223.088	0/1:197:64,133:64:2287:133:4704:-364.221,0,-146.788	0/0:341:341,0:341:12040:0:0:0,-102.6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chr10	3273525	.	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chr10	3328928	.	C	A	72644.3	PASS	AB=0.496248;ABP=4.06959;AC=47;AF=0.25;AN=188;AO=4312;CIGAR=1X;DP=16779;DPB=16779;DPRA=1.51257;EPP=9366.4;EPPR=27059.6;GTI=0;LEN=1;MEANALT=1.05172;MQM=59.9796;MQMR=59.9384;NS=94;NUMALT=1;ODDS=3.56426;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=153985;QR=445612;RO=12460;RPL=0;RPP=9366.4;RPPR=27059.6;RPR=4312;RUN=1;SAF=4312;SAP=9366.4;SAR=0;SRF=12460;SRP=27059.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:70:40,30:40:1424:30:1072:-75.7195,0,-107.382	0/0:303:303,0:303:10805:0:0:0,-91.2121,-972.351	0/0:278:277,1:277:9908:1:32:0,-80.487,-888.452	0/1:420:182,234:182:6484:234:8370:-627.722,0,-457.508	0/1:174:65,109:65:2340:109:3924:-300.971,0,-158.48	0/1:93:41,52:41:1463:52:1872:-140.763,0,-103.967	0/1:219:118,101:118:4240:101:3586:-257.02,0,-315.852	0/1:338:192,146:192:6844:146:5240:-369.986,0,-514.211	0/1:218:99,119:99:3552:119:4241:-316.243,0,-253.635	0/1:171:97,74:97:3460:74:2645:-186.816,0,-260.137	0/1:74:45,29:45:1616:29:1044:-71.9986,0,-123.454	0/1:118:59,59:59:2108:59:2098:-153.497,0,-154.467	0/0:109:109,0:109:3890:0:0:0,-32.8123,-350.293	0/0:65:65,0:65:2312:0:0:0,-19.5669,-208.341	0/0:137:137,0:137:4920:0:0:0,-41.2411,-442.913	0/0:87:87,0:87:3092:0:0:0,-26.1896,-278.505	0/0:74:74,0:74:2651:0:0:0,-22.2762,-238.789	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.032	0/1:47:27,20:27:963:20:720:-50.9804,0,-72.8356	0/1:521:261,260:261:9349:260:9219:-672.843,0,-684.531	0/1:308:150,158:150:5357:158:5637:-414.733,0,-389.537	0/1:235:82,153:82:2928:153:5446:-419.525,0,-193.013	0/0:146:146,0:146:5216:0:0:0,-43.9504,-469.579	0/0:321:317,4:317:11356:4:144:0,-83.317,-1007.82	0/1:202:99,102:99:3560:102:3642:-267.116,0,-259.727	0/0:442:442,0:442:15828:0:0:0,-133.055,-1424.21	0/0:599:598,1:598:21356:1:32:0,-177.118,-1918.26	0/1:46:28,18:28:999:18:644:-44.4432,0,-76.3771	0/1:536:251,285:251:8984:285:10176:-754.414,0,-647.187	0/1:222:131,91:131:4696:91:3249:-225.797,0,-355.971	0/0:223:223,0:223:7984:0:0:0,-67.1297,-718.496	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/1:27:13,14:13:468:14:504:-37.5703,0,-34.3318	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.243	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4685	0/0:288:288,0:288:10311:0:0:0,-86.6966,-927.906	0/1:273:156,116:156:5588:116:4145:-290.992,0,-420.797	0/1:71:29,42:29:1036:42:1504:-114.279,0,-72.1808	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9446	0/1:285:153,132:153:5453:132:4706:-337.905,0,-404.947	0/1:54:23,31:23:816:31:1112:-84.1357,0,-57.5061	0/1:256:124,132:124:4419:132:4689:-345.104,0,-320.82	0/1:114:60,54:60:2152:54:1944:-140.919,0,-159.612	0/0:105:105,0:105:3760:0:0:0,-31.6081,-338.6	0/1:269:136,133:136:4868:133:4757:-347.309,0,-357.296	0/0:315:314,1:314:11238:1:36:0,-91.2272,-1007.69	0/1:427:239,188:239:8528:188:6692:-473.815,0,-638.983	0/0:190:190,0:190:6804:0:0:0,-57.1957,-612.427	0/0:216:216,0:216:7717:0:0:0,-65.0225,-694.564	0/1:269:122,147:122:4365:147:5240:-390.76,0,-312.045	0/1:16:11,5:11:392:5:180:-11.7356,0,-30.8036	0/1:286:162,124:162:5808:124:4425:-312.308,0,-436.729	0/0:86:85,1:85:3024:1:36:0,-22.2903,-268.794	0/1:34:17,17:17:608:17:608:-44.817,0,-44.817	0/0:239:239,0:239:8552:0:0:0,-71.9462,-769.653	0/1:125:57,68:57:2032:68:2436:-181.867,0,-145.524	0/1:22:14,8:14:504:8:288:-19.6447,0,-39.0754	0/1:37:22,15:22:784:15:540:-37.7984,0,-59.7458	0/1:122:54,68:54:1932:68:2432:-182.409,0,-137.423	0/1:141:60,81:60:2156:81:2904:-219.148,0,-151.862	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/1:355:179,176:179:6412:176:6275:-457.974,0,-470.297	0/0:494:493,1:493:17637:1:36:0,-145.111,-1583.33	0/1:120:87,33:87:3108:33:1188:-71.105,0,-243.824	0/0:134:133,1:133:4776:1:36:0,-36.7397,-426.397	0/1:292:156,136:156:5600:136:4865:-350.101,0,-416.219	0/0:197:197,0:197:7009:0:0:0,-59.3029,-630.876	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.5292	0/0:165:164,1:164:5872:1:36:0,-46.0727,-524.988	0/0:103:103,0:103:3673:0:0:0,-31.0061,-330.773	0/0:31:31,0:31:1100:0:0:0,-9.33193,-99.3103	0/0:137:137,0:137:4900:0:0:0,-41.2411,-441.148	0/0:151:151,0:151:5384:0:0:0,-45.4555,-484.685	0/0:306:305,0:305:10936:0:0:0,-91.8141,-983.815	0/0:462:461,1:461:16462:1:36:0,-135.478,-1477.25	0/0:215:215,0:215:7712:0:0:0,-64.7214,-694.087	0/0:209:208,1:208:7464:1:36:0,-59.318,-668.094	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:308:308,0:308:11005:0:0:0,-92.7172,-990.346	0/1:201:86,115:86:3073:115:4117:-310.206,0,-216.278	0/1:333:171,162:171:6086:162:5759:-418.182,0,-447.6	0/0:119:119,0:119:4272:0:0:0,-35.8226,-384.655	0/0:101:101,0:101:3604:0:0:0,-30.404,-324.565	0/0:120:120,0:120:4279:0:0:0,-36.1236,-385.286	0/1:169:79,90:79:2832:90:3225:-239.596,0,-204.244	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.085	0/1:70:32,38:32:1144:38:1364:-101.989,0,-82.1082	0/1:94:60,34:60:2140:34:1224:-82.1702,0,-164.564	0/1:26:13,13:13:468:13:464:-34.2707,0,-34.6329	0/1:81:48,33:48:1724:33:1184:-82.4849,0,-131.057	0/1:80:27,53:27:972:53:1893:-146.564,0,-63.7155	0/0:189:189,0:189:6744:0:0:0,-56.8947,-607.033	0/0:173:172,1:172:6168:1:36:0,-48.4799,-551.614
chr10	3328961	.	G	A	264913	PASS	AB=0.51023;ABP=10.9185;AC=141;AF=0.75;AN=188;AO=12641;CIGAR=1X;DP=16912;DPB=16912;DPRA=0;EPP=27417.9;EPPR=9231.8;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9226;MQMR=59.9869;NS=94;NUMALT=1;ODDS=5.73676;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=450823;QR=152533;RO=4266;RPL=12636;RPP=27409.2;RPPR=9231.8;RPR=5;RUN=1;SAF=12640;SAP=27443.9;SAR=1;SRF=4266;SRP=9266.51;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:70:30,40:30:1080:40:1440:-108.822,0,-76.4402	1/1:303:0,303:0:0:303:10793:-971.147,-91.2121,0	1/1:277:1,276:1:36:276:9829:-880.942,-79.787,0	0/1:422:237,185:237:8513:185:6528:-460.473,0,-639.129	0/1:174:110,64:110:3930:64:2296:-154.522,0,-301.51	0/1:91:52,39:52:1872:39:1396:-98.5429,0,-141.365	0/1:221:101,120:101:3620:120:4297:-320.377,0,-259.478	0/1:337:140,196:140:4998:196:6949:-523.89,0,-348.458	0/1:221:117,104:117:4178:104:3714:-267.255,0,-309.67	0/1:170:74,96:74:2622:96:3417:-256.568,0,-185.05	0/1:74:29,45:29:1021:45:1604:-122.372,0,-69.924	0/1:118:58,60:58:2076:60:2141:-157.434,0,-151.589	1/1:108:0,108:0:0:108:3846:-346.329,-32.5112,0	1/1:61:0,61:0:0:61:2188:-197.186,-18.3628,0	1/1:135:0,135:0:0:135:4807:-432.747,-40.6391,0	1/1:87:0,87:0:0:87:3120:-281.025,-26.1896,0	1/1:75:0,75:0:0:75:2692:-242.504,-22.5773,0	1/1:76:0,76:0:0:76:2683:-241.71,-22.8783,0	0/1:45:20,25:20:716:25:885:-66.4183,0,-51.2214	0/1:525:256,269:256:9113:269:9569:-703.119,0,-662.102	0/1:309:156,153:156:5539:153:5492:-401.379,0,-405.616	0/1:235:152,83:152:5416:83:2969:-196.7,0,-416.824	1/1:145:0,145:0:0:145:5132:-462.018,-43.6494,0	1/1:325:4,321:4:144:321:11461:-1017.26,-84.5211,0	0/1:200:102,98:102:3649:98:3490:-254.095,0,-268.407	1/1:455:0,455:0:0:455:16275:-1464.4,-136.969,0	1/1:606:0,606:0:0:606:21590:-1942.46,-182.424,0	0/1:47:18,29:18:648:29:1025:-78.4123,0,-44.5035	0/1:539:283,256:283:10152:256:9088:-655.636,0,-751.349	0/1:221:89,132:89:3200:132:4713:-357.802,0,-221.69	1/1:221:0,221:0:0:221:7907:-711.564,-66.5276,0	1/1:40:0,40:0:0:40:1425:-128.545,-12.0412,0	0/1:27:14,13:14:504:13:468:-34.3318,0,-37.5703	1/1:24:0,24:0:0:24:860:-77.7191,-7.22472,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:26:0,26:0:0:26:917:-82.8439,-7.82678,0	1/1:295:1,294:1:32:294:10488:-940.619,-85.6045,0	0/1:272:113,159:113:4056:159:5679:-429.345,0,-283.346	0/1:72:42,30:42:1508:30:1076:-75.4787,0,-114.338	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:291:132,159:132:4669:159:5646:-420.501,0,-332.768	0/1:54:31,23:31:1101:23:809:-56.8727,0,-83.1427	0/1:259:129,127:129:4602:127:4508:-328.461,0,-336.919	0/1:113:54,59:54:1935:59:2094:-154.692,0,-140.409	1/1:109:0,109:0:0:109:3916:-352.632,-32.8123,0	0/1:270:129,141:129:4628:141:5061:-374.353,0,-335.404	1/1:321:0,321:0:0:321:11490:-1033.96,-96.6306,0	0/1:432:187,245:187:6690:245:8701:-652.981,0,-472.128	1/1:189:0,189:0:0:189:6711:-603.438,-56.8947,0	1/1:217:0,217:0:0:217:7800:-702.008,-65.3235,0	0/1:270:144,126:144:5149:126:4532:-326.767,0,-382.27	0/1:18:5,13:5:180:13:464:-36.6743,0,-11.1335	0/1:284:122,162:122:4331:162:5757:-432.74,0,-304.463	1/1:87:1,86:1:36:86:3077:-273.558,-22.5913,0	0/1:35:18,17:18:633:17:612:-44.875,0,-46.759	1/1:248:0,248:0:0:248:8882:-799.359,-74.6554,0	0/1:126:67,59:67:2393:59:2106:-151.879,0,-177.696	0/1:22:8,14:8:288:14:504:-39.0754,0,-19.6447	0/1:38:15,23:15:525:23:828:-63.405,0,-36.1389	0/1:124:68,56:68:2440:56:1989:-141.946,0,-182.527	0/1:140:80,60:80:2868:60:2148:-151.443,0,-216.21	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	0/1:356:176,180:176:6324:180:6357:-465.051,0,-462.08	1/1:508:1,507:1:36:507:18115:-1626.33,-149.325,0	0/1:119:33,86:33:1169:86:3077:-241.334,0,-69.6927	1/1:132:1,131:1:36:131:4682:-417.94,-36.1377,0	0/1:298:132,165:132:4733:165:5856:-437.381,0,-336.358	1/1:204:0,204:0:0:204:7241:-651.74,-61.4101,0	1/1:20:0,20:0:0:20:686:-62.0557,-6.0206,0	1/1:165:0,165:0:0:165:5736:-516.351,-49.67,0	1/1:106:0,106:0:0:106:3808:-342.916,-31.9092,0	1/1:32:0,32:0:0:32:1144:-103.27,-9.63296,0	1/1:137:0,137:0:0:137:4890:-440.246,-41.2411,0	1/1:151:0,151:0:0:151:5379:-484.22,-45.4555,0	1/1:303:0,303:0:0:303:10851:-976.486,-91.2121,0	1/1:464:0,464:0:0:464:16494:-1484.1,-139.678,0	1/1:218:1,217:1:36:217:7739:-692.926,-62.0263,0	1/1:213:0,213:0:0:213:7630:-686.621,-64.1194,0	1/1:21:0,21:0:0:21:748:-67.6447,-6.32163,0	1/1:311:0,311:0:0:311:11127:-1001.32,-93.6203,0	0/1:203:114,89:114:4104:89:3196:-226.742,0,-308.434	0/1:341:164,177:164:5851:177:6307:-465.069,0,-424.047	1/1:121:0,121:0:0:121:4303:-387.442,-36.4246,0	1/1:104:0,104:0:0:104:3702:-333.381,-31.3071,0	1/1:124:0,124:0:0:124:4426:-398.509,-37.3277,0	0/1:170:89,81:89:3185:81:2916:-211.499,0,-235.697	1/1:48:0,48:0:0:48:1709:-154.093,-14.4494,0	0/1:70:37,33:37:1332:33:1179:-85.2757,0,-99.1103	0/1:93:32,61:32:1152:61:2181:-168.123,0,-75.9944	0/1:25:12,13:12:432:13:468:-34.9339,0,-31.6954	0/1:80:32,48:32:1148:48:1728:-131.718,0,-79.5474	0/1:79:53,26:53:1904:26:936:-60.7781,0,-147.856	1/1:193:0,193:0:0:193:6929:-623.662,-58.0988,0	1/1:175:0,175:0:0:175:6251:-562.682,-52.6803,0
chr10	3329009	.	A	T	250484	PASS	AB=0.484834;ABP=19.6084;AC=140;AF=0.744681;AN=188;AO=11432;CIGAR=1X;DP=15748;DPB=15748;DPRA=0;EPP=22101;EPPR=8300.84;GTI=0;LEN=1;MEANALT=1.11702;MQM=59.971;MQMR=60;NS=94;NUMALT=1;ODDS=6.06167;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=408077;QR=153791;RO=4303;RPL=11109;RPP=22101;RPPR=8300.84;RPR=323;RUN=1;SAF=0;SAP=24827.3;SAR=11432;SRF=0;SRP=9346.86;SRR=4303;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:67:29,38:29:1040:38:1341:-100.814,0,-73.7454	1/1:241:0,241:0:0:241:8567:-771.017,-72.5482,0	1/1:188:0,188:0:0:188:6714:-604.334,-56.5936,0	0/1:278:122,156:122:4366:156:5574:-418.097,0,-309.427	0/1:108:64,44:64:2274:44:1564:-108.54,0,-172.41	0/1:96:44,52:44:1576:52:1863:-139.05,0,-113.233	0/1:276:124,152:124:4435:152:5414:-404.308,0,-316.237	0/1:238:97,141:97:3450:141:5040:-382.102,0,-239.068	0/1:187:94,93:94:3348:93:3328:-243.444,0,-245.243	0/1:193:109,84:109:3892:84:2998:-211.947,0,-292.376	0/1:183:93,90:93:3320:90:3207:-233.765,0,-243.93	0/1:127:65,62:65:2332:62:2220:-161.834,0,-171.909	1/1:107:0,107:0:0:107:3832:-345.077,-32.2102,0	1/1:178:0,178:0:0:178:6338:-570.514,-53.5833,0	1/1:127:0,126:0:0:126:4499:-404.719,-37.9298,0	1/1:98:0,97:0:0:97:3483:-313.318,-29.1999,0	1/1:126:0,126:0:0:126:4486:-403.881,-37.9298,0	1/1:74:0,74:0:0:74:2647:-238.475,-22.2762,0	0/1:96:64,32:64:2291:32:1143:-74.2805,0,-177.552	0/1:385:204,181:204:7304:181:6460:-465.592,0,-541.514	0/1:229:101,128:101:3603:128:4556:-341.273,0,-255.541	0/1:199:134,65:134:4796:65:2324:-149.515,0,-371.891	1/1:223:1,222:1:36:222:7940:-711.027,-63.5314,0	1/1:239:11,226:11:396:226:8073:-690.608,-35.7043,0	0/1:148:66,82:66:2356:82:2919:-218.393,0,-167.747	1/1:322:0,322:0:0:322:11417:-1027.41,-96.9317,0	1/1:423:2,421:2:72:421:15017:-1344.32,-120.499,0	0/1:51:31,20:31:1116:20:720:-49.7762,0,-85.3992	0/1:371:188,182:188:6739:182:6511:-474.333,0,-494.842	0/1:225:116,109:116:4149:109:3863:-280.137,0,-305.86	1/1:208:0,208:0:0:208:7422:-668.016,-62.6142,0	1/1:17:0,17:0:0:17:604:-54.6906,-5.11751,0	0/1:37:18,19:18:644:19:680:-50.3911,0,-47.1525	1/1:15:0,15:0:0:15:535:-48.4843,-4.51545,0	1/1:36:0,36:0:0:36:1287:-116.133,-10.8371,0	1/1:14:0,14:0:0:14:496:-44.9739,-4.21442,0	1/1:308:0,308:0:0:308:11011:-990.884,-92.7172,0	0/1:304:177,127:177:6333:127:4512:-314.736,0,-478.547	0/1:132:78,53:78:2788:53:1895:-131.033,0,-211.366	0/1:12:2,10:2:72:10:360:-29.1319,0,-3.22436	0/1:241:132,109:132:4711:109:3884:-277.208,0,-351.602	0/1:83:44,39:44:1584:39:1404:-101.674,0,-117.866	0/1:237:111,126:111:3968:126:4487:-332.655,0,-285.967	0/1:124:64,60:64:2296:60:2152:-156.619,0,-169.573	1/1:79:0,79:0:0:79:2828:-254.759,-23.7814,0	0/1:196:92,104:92:3300:104:3728:-276.718,0,-238.217	1/1:165:0,165:0:0:165:5899:-531.019,-49.67,0	0/1:238:127,111:127:4544:111:3968:-285.666,0,-337.482	1/1:226:0,226:0:0:226:8070:-726.32,-68.0328,0	1/1:330:3,327:3:104:327:11684:-1041.72,-89.6371,0	0/1:302:134,168:134:4792:168:6020:-450.993,0,-340.526	0/1:28:18,10:18:640:10:360:-24.3155,0,-49.5005	0/1:301:141,160:141:5029:160:5717:-424.036,0,-362.147	1/1:108:0,108:0:0:108:3876:-349.033,-32.5112,0	0/1:39:25,14:25:896:14:500:-33.596,0,-69.2202	1/1:217:0,217:0:0:217:7740:-696.634,-65.3235,0	0/1:74:31,43:31:1100:43:1536:-116.257,0,-77.0341	0/1:24:7,17:7:252:17:608:-47.8273,0,-15.8042	0/1:54:30,24:30:1068:24:856:-61.1055,0,-80.1764	0/1:187:97,90:97:3450:90:3212:-232.997,0,-254.421	0/1:202:104,98:104:3728:98:3517:-255.931,0,-274.913	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:242:138,104:138:4940:104:3708:-261.074,0,-371.901	1/1:317:0,317:0:0:317:11313:-1018.05,-95.4265,0	0/1:81:36,45:36:1279:45:1600:-119.907,0,-91.029	1/1:132:0,132:0:0:132:4719:-424.868,-39.736,0	0/1:297:164,133:164:5823:133:4752:-338.423,0,-434.78	1/1:244:2,241:2:68:241:8624:-769.689,-67.0458,0	1/1:92:0,92:0:0:92:3277:-295.15,-27.6948,0	1/1:124:0,124:0:0:124:4410:-397.072,-37.3277,0	1/1:138:0,137:0:0:137:4906:-441.33,-41.2411,0	1/1:62:0,62:0:0:62:2190:-197.175,-18.6639,0	1/1:184:0,184:0:0:184:6542:-588.867,-55.3895,0	1/1:132:0,130:0:0:130:4625:-416.055,-39.1339,0	1/1:417:1,416:1:36:416:14837:-1331.45,-121.931,0	1/1:209:0,209:0:0:209:7470:-672.338,-62.9153,0	1/1:239:0,239:0:0:239:8549:-769.407,-71.9462,0	1/1:159:3,156:3:108:156:5569:-491.258,-37.7886,0	1/1:34:0,34:0:0:34:1212:-109.386,-10.235,0	1/1:126:2,124:2:72:124:4427:-391.765,-31.0931,0	0/1:131:72,59:72:2568:59:2108:-150.554,0,-191.935	0/1:284:117,167:117:4200:167:5965:-451.463,0,-292.687	1/1:136:1,135:1:36:135:4788:-427.481,-37.3418,0	1/1:116:0,116:0:0:116:4164:-374.886,-34.9195,0	1/1:148:0,146:0:0:146:5217:-469.35,-43.9504,0	0/1:222:132,89:132:4736:89:3188:-220.254,0,-359.51	1/1:64:0,64:0:0:64:2282:-205.642,-19.2659,0	0/1:134:73,61:73:2620:61:2155:-153.648,0,-195.709	0/1:120:62,58:62:2203:58:2076:-150.986,0,-162.411	0/1:151:81,70:81:2883:70:2507:-180.427,0,-214.251	0/1:251:144,107:144:5125:107:3832:-269.518,0,-385.835	0/1:123:81,42:81:2904:42:1496:-97.9079,0,-224.569	1/1:127:0,127:0:0:127:4532:-408.048,-38.2308,0	1/1:149:0,149:0:0:149:5343:-481.001,-44.8535,0
chr10	3329015	.	TAC	AAC	242492	PASS	AB=0.476443;ABP=43.9332;AC=140;AF=0.744681;AN=188;AO=11538;CIGAR=1X2M;DP=16034;DPB=16034;DPRA=0;EPP=24780.3;EPPR=9441.55;GTI=0;LEN=1;MEANALT=1.43617;MQM=59.9757;MQMR=59.9955;NS=94;NUMALT=1;ODDS=3.20044;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=412975;QR=155264;RO=4450;RPL=11506;RPP=24780.3;RPPR=9441.55;RPR=32;RUN=1;SAF=0;SAP=25057.5;SAR=11538;SRF=0;SRP=9666.06;SRR=4450;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:29,39:29:1038:39:1400:-105.759,0,-73.2644	1/1:246:1,244:1:21:244:8731:-783.586,-71.9373,0	1/1:193:0,192:0:0:192:6852:-616.388,-57.7978,0	0/1:279:126,151:126:4370:151:5383:-400.856,0,-309.733	0/1:111:66,45:66:2320:45:1612:-111.956,0,-175.646	0/1:100:45,55:45:1567:55:1975:-147.922,0,-111.213	0/1:282:131,151:131:4572:151:5424:-403.397,0,-326.76	0/1:247:104,143:104:3629:143:5136:-388.025,0,-252.462	0/1:192:98,94:98:3434:94:3343:-243.287,0,-251.478	0/1:192:111,81:111:3874:81:2875:-201.182,0,-291.06	0/1:184:96,88:96:3342:88:3164:-229.594,0,-245.61	0/1:131:69,62:69:2434:62:2215:-160.179,0,-179.88	1/1:107:0,107:0:0:107:3848:-346.514,-32.2102,0	1/1:176:0,176:0:0:176:6313:-568.259,-52.9813,0	1/1:131:0,130:0:0:130:4642:-417.692,-39.1339,0	1/1:100:0,99:0:0:99:3538:-318.267,-29.802,0	1/1:125:0,124:0:0:124:4438:-399.34,-37.3277,0	1/1:75:0,74:0:0:74:2655:-238.836,-22.2762,0	0/1:99:65,34:65:2292:34:1224:-80.6651,0,-176.738	0/1:394:207,187:207:7262:187:6695:-484.02,0,-535.04	0/1:235:105,130:105:3655:130:4638:-346.838,0,-258.416	0/1:206:136,66:136:4748:66:2372:-152.569,0,-366.32	1/1:224:0,224:0:0:224:8020:-721.82,-67.4307,0	1/1:240:12,228:12:417:228:8179:-698.259,-34.387,0	0/1:152:68,83:68:2381:83:2944:-219.378,0,-168.73	1/1:327:0,327:0:0:327:11726:-1055.2,-98.4368,0	1/1:429:3,426:3:92:426:15285:-1366.67,-120.558,0	0/1:54:33,18:33:1127:18:644:-42.5786,0,-86.0179	0/1:373:191,182:191:6676:182:6521:-474.685,0,-488.648	0/1:231:120,109:120:4157:109:3873:-279.467,0,-305.025	1/1:218:0,217:0:0:217:7736:-696.008,-65.3235,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:38:18,20:18:642:20:712:-52.9675,0,-46.6711	1/1:17:0,17:0:0:17:607:-54.9616,-5.11751,0	1/1:37:0,37:0:0:37:1314:-118.56,-11.1381,0	1/1:13:0,13:0:0:13:464:-42.0971,-3.91339,0	1/1:311:0,311:0:0:311:11135:-1002.03,-93.6203,0	0/1:312:183,128:183:6373:128:4588:-319.104,0,-479.694	0/1:134:79,55:79:2790:55:1980:-138.136,0,-211.003	0/1:12:2,10:2:72:10:360:-29.1319,0,-3.22436	0/1:243:139,104:139:4781:104:3728:-262.57,0,-357.307	0/1:87:45,42:45:1584:42:1512:-110.185,0,-116.659	0/1:242:116,126:116:3994:126:4494:-331.777,0,-286.806	0/1:128:68,60:68:2340:60:2156:-155.775,0,-172.321	1/1:83:0,82:0:0:82:2936:-264.115,-24.6845,0	0/1:199:95,104:95:3337:104:3716:-274.734,0,-240.646	1/1:168:0,168:0:0:168:6030:-542.801,-50.573,0	0/1:245:132,112:132:4536:112:3997:-286.228,0,-334.669	1/1:226:0,225:0:0:225:8052:-724.339,-67.7318,0	1/1:338:3,334:3:99:334:11962:-1067.21,-92.5017,0	0/1:310:134,175:134:4715:175:6244:-468.677,0,-331.137	0/1:31:21,10:21:718:10:360:-23.4124,0,-55.6044	0/1:308:144,163:144:5048:163:5833:-432.414,0,-361.806	1/1:109:1,108:1:20:108:3876:-347.034,-30.8123,0	0/1:41:26,15:26:922:15:540:-36.5943,0,-70.9554	1/1:220:0,220:0:0:220:7879:-709.133,-66.2266,0	0/1:76:34,42:34:1172:42:1499:-112.326,0,-82.9025	0/1:24:8,16:8:281:16:576:-44.9503,0,-18.4056	0/1:55:31,24:31:1046:24:864:-61.5259,0,-77.8843	0/1:191:101,90:101:3502:90:3228:-233.231,0,-257.897	0/1:200:103,94:103:3628:94:3369:-243.763,0,-267.065	1/1:22:0,22:0:0:22:788:-71.2448,-6.62266,0	0/1:254:146,106:146:5086:106:3797:-265.708,0,-381.675	1/1:318:1,316:1:20:316:11306:-1015.34,-93.7065,0	0/1:82:37,45:37:1293:45:1616:-121.046,0,-91.9837	1/1:136:0,136:0:0:136:4846:-436.291,-40.9401,0	0/1:304:171,133:171:5937:133:4754:-336.494,0,-442.937	1/1:252:2,250:2:57:250:8952:-800.243,-70.4463,0	1/1:92:0,91:0:0:91:3254:-292.721,-27.3937,0	1/1:125:0,125:0:0:125:4460:-401.57,-37.6288,0	1/1:142:0,142:0:0:142:5091:-458.332,-42.7463,0	1/1:61:0,60:0:0:60:2142:-192.796,-18.0618,0	1/1:190:0,189:0:0:189:6746:-606.854,-56.8947,0	1/1:132:0,131:0:0:131:4672:-420.281,-39.4349,0	1/1:422:1,421:1:36:421:15041:-1349.75,-123.436,0	1/1:212:0,211:0:0:211:7558:-679.891,-63.5173,0	1/1:239:1,238:1:20:238:8540:-766.595,-69.9462,0	1/1:163:3,160:3:106:160:5685:-501.878,-39.1788,0	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	1/1:129:2,127:2:72:127:4538:-401.748,-31.9961,0	0/1:134:75,59:75:2626:59:2116:-150.371,0,-196.249	0/1:295:126,169:126:4392:169:6058:-456.516,0,-306.655	1/1:138:1,137:1:36:137:4911:-438.541,-37.9439,0	1/1:118:0,117:0:0:117:4200:-377.82,-35.2205,0	1/1:145:0,143:0:0:143:5132:-461.715,-43.0473,0	0/1:224:135,87:135:4791:87:3112:-213.224,0,-364.269	1/1:64:0,63:0:0:63:2264:-203.771,-18.9649,0	0/1:136:74,62:74:2589:62:2224:-159.483,0,-192.316	0/1:122:63,58:63:2222:58:2069:-149.694,0,-163.459	0/1:153:82,71:82:2865:71:2556:-184.232,0,-212.028	0/1:255:148,105:148:5223:105:3761:-262.241,0,-393.765	0/1:125:83,42:83:2885:42:1504:-98.0258,0,-222.258	1/1:128:0,128:0:0:128:4583:-412.633,-38.5318,0	1/1:150:0,150:0:0:150:5387:-484.956,-45.1545,0
chr10	3520897	.	ACGTTTTGA	CCGTTTGA	50086.2	PASS	AB=0.487516;ABP=11.6853;AC=48;AF=0.255319;AN=188;AO=3151;CIGAR=1X2M1D5M;DP=11630;DPB=11635.6;DPRA=1.47227;EPP=6845.32;EPPR=18286.8;GTI=0;LEN=8;MEANALT=1.58621;MQM=59.6522;MQMR=59.9923;NS=94;NUMALT=1;ODDS=3.42086;PAIRED=0;PAIREDR=0;PAO=3205;PQA=81759;PQR=238;PRO=7;QA=109995;QR=295648;RO=8424;RPL=2;RPP=6827.96;RPPR=18252.1;RPR=3149;RUN=1;SAF=2;SAP=6827.96;SAR=3149;SRF=4;SRP=18260.8;SRR=8420;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:73:47,25:47:1641:25:854:-55.1321,0,-125.944	0/0:95:92,0:92:3220:0:0:0,-27.6948,-289.718	0/0:207:207,0:207:7273:0:0:0,-62.3132,-654.642	0/1:317:182,134:182:6420:134:4671:-325.119,0,-482.513	0/1:56:21,35:21:750:35:1237:-94.4471,0,-50.6407	0/1:92:55,36:55:1915:36:1259:-85.8387,0,-144.872	0/1:103:55,48:55:1940:48:1686:-120.698,0,-143.639	0/1:189:117,72:117:4068:72:2496:-167.988,0,-309.422	0/1:153:95,58:95:3324:58:2020:-135.994,0,-253.328	0/1:82:28,54:28:970:54:1884:-144.843,0,-62.6318	0/1:53:21,31:21:732:31:1090:-82.495,0,-50.2781	0/1:111:54,57:54:1902:57:2006:-147.398,0,-138.045	0/0:98:97,0:97:3401:0:0:0,-29.1999,-305.953	0/0:78:78,0:78:2741:0:0:0,-23.4803,-246.937	0/0:104:104,0:104:3629:0:0:0,-31.3071,-326.747	0/0:74:74,0:74:2592:0:0:0,-22.2762,-233.534	0/0:40:40,0:40:1380:0:0:0,-12.0412,-124.496	0/0:53:53,0:53:1854:0:0:0,-15.9546,-167.139	0/1:37:21,15:21:735:15:530:-36.8314,0,-55.2765	0/1:144:58,86:58:2039:86:3000:-226.581,0,-140.131	0/1:221:120,100:120:4177:100:3499:-248.511,0,-309.59	0/1:122:48,74:48:1687:74:2556:-193.236,0,-115.066	0/0:223:217,6:217:7629:6:198:0,-49.1201,-668.587	0/0:92:85,7:85:2989:7:239:0,-6.15974,-247.432	0/1:119:73,42:73:2559:42:1468:-97.4674,0,-195.635	0/0:376:374,2:374:13187:2:69:0,-106.894,-1180.24	0/1:338:148,188:148:5231:188:6528:-486.153,0,-369.478	0/1:34:17,16:17:597:16:555:-40.0345,0,-43.8171	0/1:419:235,178:235:8233:178:6187:-432.197,0,-616.387	0/1:203:117,86:117:4076:86:3030:-211.516,0,-305.636	0/0:172:171,0:171:5968:0:0:0,-51.4761,-536.695	0/0:19:19,0:19:656:0:0:0,-5.71957,-59.3621	0/1:23:15,8:15:526:8:283:-18.5989,0,-40.4642	0/0:7:7,0:7:237:0:0:0,-2.10721,-21.661	0/0:13:13,0:13:462:0:0:0,-3.91339,-41.9164	0/0:27:27,0:27:947:0:0:0,-8.12781,-85.5447	0/0:186:184,0:184:6518:0:0:0,-55.3895,-586.427	0/1:127:60,67:60:2112:67:2337:-171.807,0,-151.797	0/1:60:30,30:30:1051:30:1066:-78.1759,0,-76.8389	0/1:10:5,5:5:174:5:178:-13.0778,0,-12.7122	0/1:196:107,88:107:3729:88:3103:-220.482,0,-276.809	0/1:31:19,12:19:665:12:415:-28.0351,0,-50.5367	0/1:291:147,144:147:5154:144:4954:-358.085,0,-376.102	0/1:55:33,22:33:1159:22:778:-53.4946,0,-87.7908	0/0:84:83,1:83:2905:1:36:0,-21.8682,-258.268	0/1:177:74,102:74:2584:102:3534:-264.991,0,-179.529	0/0:155:152,3:152:5314:3:99:0,-37.4231,-469.173	0/1:251:114,136:114:3980:136:4760:-352.74,0,-282.863	0/1:140:59,80:59:2074:80:2812:-211.041,0,-144.812	0/0:180:179,0:179:6321:0:0:0,-53.8844,-568.667	0/1:156:58,98:58:2034:98:3455:-263.882,0,-136.064	0/1:17:4,13:4:139:13:450:-35.5266,0,-7.495	0/1:151:88,63:88:3111:63:2224:-154.966,0,-234.765	0/0:112:112,0:112:3937:0:0:0,-33.7154,-354.529	0/0:24:24,0:24:848:0:0:0,-7.22472,-76.6401	0/0:196:196,0:196:6850:0:0:0,-59.0019,-616.589	0/1:96:42,54:42:1478:54:1894:-141.581,0,-104.149	0/0:18:18,0:18:641:0:0:0,-5.41854,-58.02	0/1:17:5,11:5:178:11:388:-30.1492,0,-11.2375	0/1:104:56,48:56:1969:48:1693:-120.982,0,-145.881	0/1:78:32,44:32:1140:44:1524:-114.283,0,-79.7407	0/0:13:13,0:13:455:0:0:0,-3.91339,-41.2827	0/1:231:132,98:132:4630:98:3420:-238.432,0,-347.332	0/0:259:258,1:258:9106:1:36:0,-74.6721,-815.993	0/1:88:59,28:59:2059:28:993:-63.1717,0,-159.093	0/0:144:143,1:143:4973:1:29:0,-41.0029,-445.15	0/1:233:118,113:118:4142:113:3948:-285.697,0,-303.182	0/0:184:180,4:180:6343:4:136:0,-43.0637,-558.51	0/0:39:38,0:38:1326:0:0:0,-11.4391,-119.28	0/0:66:65,0:65:2295:0:0:0,-19.5669,-206.453	0/0:52:52,0:52:1812:0:0:0,-15.6536,-163.363	0/0:46:46,0:46:1600:0:0:0,-13.8474,-144.289	0/0:103:103,0:103:3603:0:0:0,-31.0061,-324.485	0/0:128:126,1:126:4426:1:36:0,-34.9724,-394.943	0/0:247:246,0:246:8644:0:0:0,-74.0534,-777.621	0/0:213:210,0:210:7389:0:0:0,-63.2163,-664.832	0/0:267:266,0:266:9303:0:0:0,-80.074,-836.911	0/0:152:151,0:151:5312:0:0:0,-45.4555,-477.985	0/0:35:35,0:35:1232:0:0:0,-10.536,-111.184	0/0:145:145,0:145:5137:0:0:0,-43.6493,-462.206	0/1:177:81,95:81:2831:95:3365:-249.712,0,-201.692	0/1:293:160,132:160:5635:132:4568:-323.109,0,-419.107	0/0:51:51,0:51:1775:0:0:0,-15.3525,-160.032	0/0:89:89,0:89:3116:0:0:0,-26.7917,-280.672	0/0:68:68,0:68:2393:0:0:0,-20.47,-215.63	0/1:141:53,87:53:1863:87:3058:-233.025,0,-125.516	0/0:26:26,0:26:902:0:0:0,-7.82678,-81.4939	0/1:63:30,33:30:1032:33:1150:-84.8353,0,-74.222	0/1:95:53,40:53:1862:40:1396:-97.5801,0,-139.505	0/1:71:33,38:33:1175:38:1323:-97.7018,0,-84.3953	0/1:94:47,46:47:1643:46:1581:-114.283,0,-119.864	0/1:76:21,54:21:733:54:1875:-146.056,0,-43.4105	0/0:128:127,1:127:4475:1:36:0,-35.2176,-399.48	0/0:134:133,0:133:4674:0:0:0,-40.037,-420.472
chr10	3637773	.	C	T	88153.8	PASS	AB=0.490159;ABP=11.5577;AC=50;AF=0.265957;AN=188;AO=5001;CIGAR=1X;DP=18551;DPB=18551;DPRA=1.75554;EPP=10019.7;EPPR=26800.1;GTI=0;LEN=1;MEANALT=1.16393;MQM=59.9482;MQMR=59.9837;NS=94;NUMALT=1;ODDS=12.0904;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=178688;QR=482887;RO=13533;RPL=4902;RPP=10019.7;RPPR=26808.4;RPR=99;RUN=1;SAF=0;SAP=10862.5;SAR=5001;SRF=1;SRP=29380.9;SRR=13532;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:92:36,56:36:1284:56:1993:-151.947,0,-88.1687	0/0:83:83,0:83:2968:0:0:0,-24.9855,-267.353	0/0:162:162,0:162:5777:0:0:0,-48.7669,-520.046	0/1:158:96,62:96:3432:62:2224:-152.861,0,-261.531	0/1:52:24,28:24:852:28:996:-74.2998,0,-61.3468	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	0/1:43:23,20:23:812:20:720:-52.1845,0,-60.4566	0/1:201:94,107:94:3351:107:3840:-285.278,0,-241.3	0/1:130:67,62:67:2389:62:2232:-161.951,0,-176.073	0/1:35:21,14:21:756:14:500:-34.8001,0,-57.8312	0/1:179:88,91:88:3132:91:3268:-240.455,0,-228.22	0/1:71:36,35:36:1283:35:1252:-91.6119,0,-94.3995	0/0:68:68,0:68:2428:0:0:0,-20.47,-218.776	0/0:51:51,0:51:1806:0:0:0,-15.3525,-162.82	0/0:45:45,0:45:1607:0:0:0,-13.5463,-144.919	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:95:48,47:48:1724:47:1677:-122.617,0,-126.848	0/1:134:70,64:70:2504:64:2292:-166.203,0,-185.275	0/1:161:82,79:82:2924:79:2820:-205.574,0,-214.93	0/1:90:23,67:23:824:67:2404:-189.524,0,-47.3906	0/0:233:232,1:232:8290:1:36:0,-66.5417,-742.509	0/0:60:54,5:54:1921:5:180:0,-1.56853,-156.613	0/1:87:54,33:54:1932:33:1184:-80.6787,0,-147.967	0/0:296:296,0:296:10574:0:0:0,-89.1049,-951.57	0/1:108:34,74:34:1220:74:2652:-206.414,0,-77.5956	0/1:20:11,9:11:392:9:324:-23.4853,0,-29.5995	0/1:220:130,90:130:4637:90:3232:-224.874,0,-351.21	0/1:90:39,51:39:1384:51:1813:-136.312,0,-97.7661	0/0:97:97,0:97:3453:0:0:0,-29.1999,-310.982	0/0:1203:1200,2:1200:42830:2:57:0,-356.76,-3847.82	0/1:1068:557,510:557:19882:510:18213:-1317.18,0,-1466.72	0/0:480:480,0:480:17148:0:0:0,-144.494,-1542.95	0/0:705:703,2:703:25051:2:72:0,-205.389,-2245.7	0/1:1571:764,806:764:27232:806:28789:-2117.1,0,-1977.12	0/0:130:130,0:130:4640:0:0:0,-39.1339,-417.743	0/1:169:108,60:108:3824:60:2144:-142.295,0,-293.426	0/1:156:88,68:88:3143:68:2402:-169.473,0,-236.135	0/1:341:199,142:199:7111:142:5092:-355.771,0,-537.399	0/1:67:40,27:40:1428:27:972:-67.6289,0,-108.649	0/1:112:60,52:60:2152:52:1868:-134.684,0,-160.232	0/1:232:109,122:109:3878:122:4364:-323.032,0,-279.307	0/1:47:22,25:22:784:25:896:-66.8119,0,-56.7355	0/0:32:32,0:32:1140:0:0:0,-9.63296,-102.909	0/1:105:55,50:55:1972:50:1784:-129.235,0,-146.147	0/0:160:159,0:159:5685:0:0:0,-47.8638,-510.046	0/1:440:208,232:208:7422:232:8259:-610.866,0,-535.572	0/1:114:63,51:63:2256:51:1820:-129.764,0,-168.985	0/0:150:150,0:150:5353:0:0:0,-45.1545,-481.903	0/1:54:21,33:21:756:33:1188:-90.973,0,-52.1116	0/1:519:307,212:307:10953:212:7526:-521.148,0,-829.434	0/1:82:46,36:46:1632:36:1288:-91.5391,0,-122.484	0/0:39:38,1:38:1364:1:36:0,-8.14189,-119.462	0/0:637:636,0:636:22663:0:0:0,-191.455,-2038.65	0/0:152:151,1:151:5324:1:36:0,-42.1583,-475.428	0/1:57:29,28:29:1044:28:974:-70.8095,0,-77.1161	0/0:669:668,0:668:23861:0:0:0,-201.088,-2146.48	0/1:663:321,341:321:11455:341:12206:-898.727,0,-831.336	0/1:78:26,52:26:936:52:1845:-142.847,0,-61.0791	0/1:36:22,14:22:784:14:470:-31.7807,0,-60.0468	0/1:798:397,400:397:14167:400:14261:-1042.97,0,-1034.51	0/1:89:38,50:38:1356:50:1788:-134.352,0,-95.4901	0/0:118:115,0:115:4081:0:0:0,-34.6184,-367.118	0/1:28:20,8:20:720:8:284:-17.4745,0,-56.6999	0/0:48:48,0:48:1712:0:0:0,-14.4494,-154.363	0/1:220:136,84:136:4827:84:3020:-205.799,0,-368.355	0/0:189:188,1:188:6724:1:36:0,-53.2964,-601.635	0/0:207:206,1:206:7396:1:36:0,-58.7149,-662.085	0/0:40:40,0:40:1432:0:0:0,-12.0412,-129.178	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:365:363,2:363:12938:2:72:0,-103.039,-1157.4	0/0:149:149,0:149:5329:0:0:0,-44.8535,-479.742	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:274:274,0:274:9768:0:0:0,-82.4822,-879.065	0/0:102:100,2:100:3573:2:72:0,-23.8683,-314.939	0/0:93:93,0:93:3324:0:0:0,-27.9958,-299.378	0/0:63:63,0:63:2256:0:0:0,-18.9649,-203.303	0/0:764:762,2:762:27190:2:72:0,-223.15,-2439.48	0/0:79:79,0:79:2811:0:0:0,-23.7814,-253.23	0/1:88:37,51:37:1324:51:1824:-137.95,0,-92.9715	0/1:204:109,95:109:3900:95:3408:-245.506,0,-289.784	0/0:49:49,0:49:1741:0:0:0,-14.7505,-156.972	0/0:43:43,0:43:1527:0:0:0,-12.9443,-137.722	0/0:33:32,0:32:1144:0:0:0,-9.63296,-102.91	0/1:99:61,38:61:2175:38:1360:-92.8986,0,-166.214	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/1:46:19,27:19:680:27:968:-73.59,0,-47.6818	0/1:51:24,27:24:855:27:968:-72.0848,0,-61.9176	0/1:215:96,119:96:3444:119:4262:-318.987,0,-245.451	0/1:367:185,182:185:6615:182:6517:-476.134,0,-484.952	0/1:64:23,41:23:811:41:1476:-113.87,0,-54.044	0/0:68:68,0:68:2420:0:0:0,-20.47,-218.057	0/0:86:86,0:86:3048:0:0:0,-25.8886,-274.546
chr10	4001176	.	G	C	256888	PASS	AB=0.636149;ABP=1708.88;AC=109;AF=0.579787;AN=188;AO=12911;CIGAR=1X;DP=16832;DPB=16832;DPRA=0;EPP=28012.8;EPPR=472.649;GTI=12;LEN=1;MEANALT=1.12766;MQM=59.993;MQMR=59.9882;NS=94;NUMALT=1;ODDS=1.008;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=457197;QR=138454;RO=3905;RPL=1;RPP=28030.2;RPPR=8482.61;RPR=12910;RUN=1;SAF=2;SAP=28021.5;SAR=12909;SRF=2412;SRP=472.649;SRR=1493;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:32,26:32:1132:26:915:-65.2058,0,-84.7288	0/1:157:18,139:18:640:139:4922:-395.871,0,-10.6676	0/1:96:9,86:9:324:86:3072:-247.751,0,-0.548177	0/1:254:95,159:95:3357:159:5589:-426.682,0,-225.887	0/1:70:38,32:38:1347:32:1140:-81.8371,0,-100.457	0/1:61:35,26:35:1224:26:932:-65.836,0,-92.0981	0/1:187:67,120:67:2376:120:4256:-326.928,0,-157.803	0/1:263:76,187:76:2651:187:6633:-517.884,0,-159.663	0/1:113:78,35:78:2792:35:1235:-77.4371,0,-217.504	0/1:140:51,89:51:1813:89:3151:-241.673,0,-121.305	0/1:328:83,244:83:2927:244:8632:-678.088,0,-164.868	0/1:141:102,39:102:3546:39:1388:-82.7737,0,-276.906	0/1:65:28,37:28:1008:37:1328:-100.255,0,-71.4694	0/1:60:21,39:21:756:39:1379:-106.346,0,-50.3054	0/1:43:14,29:14:504:29:1027:-79.7979,0,-32.7538	0/1:50:23,27:23:828:27:940:-69.8593,0,-59.7926	0/1:66:26,40:26:904:40:1407:-107.058,0,-61.8039	0/1:57:17,39:17:604:39:1392:-108.362,0,-37.4734	0/1:208:73,135:73:2608:135:4754:-365.408,0,-172.354	0/1:225:59,166:59:2091:166:5872:-460.863,0,-120.728	0/1:182:74,108:74:2621:108:3822:-289.39,0,-181.349	0/1:85:11,74:11:396:74:2599:-208.57,0,-10.3952	0/1:32:11,21:11:396:21:744:-57.6514,0,-26.3498	0/1:93:30,63:30:1068:63:2205:-170.719,0,-68.4363	0/1:78:34,44:34:1195:44:1536:-115.049,0,-84.3742	0/1:267:48,219:48:1709:219:7761:-618.152,0,-73.7188	0/1:247:93,154:93:3309:154:5484:-419.334,0,-223.674	0/1:69:58,11:58:2080:11:380:-13.7609,0,-166.699	0/1:332:114,218:114:4018:218:7754:-597.956,0,-261.867	0/1:160:33,127:33:1171:127:4490:-356.106,0,-57.5319	0/1:83:23,60:23:828:60:2128:-166.803,0,-49.8586	1/1:387:1,385:1:36:385:13716:-1230.63,-112.959,0	1/1:451:9,442:9:297:442:15644:-1380.14,-108.714,0	1/1:471:1,464:1:36:464:16424:-1474.25,-136.741,0	1/1:606:3,603:3:108:603:21398:-1915.19,-172.349,0	1/1:328:3,325:3:108:325:11519:-1026.52,-88.6627,0	0/1:198:62,136:62:2224:136:4796:-372.198,0,-140.82	0/1:202:53,149:53:1879:149:5250:-411.835,0,-108.58	0/1:356:91,265:91:3251:265:9395:-738.354,0,-185.644	1/1:246:4,242:4:140:242:8532:-754.946,-61.1088,0	0/1:153:50,103:50:1738:103:3631:-280.939,0,-110.643	0/1:161:34,127:34:1207:127:4493:-356.077,0,-60.4694	0/1:136:61,75:61:2162:75:2647:-197.538,0,-153.906	0/1:159:129,30:129:4545:30:1067:-48.4774,0,-361.356	0/1:67:25,42:25:896:42:1484:-113.685,0,-60.7913	0/1:93:52,41:52:1828:41:1443:-102.169,0,-136.802	0/1:70:30,40:30:1072:40:1419:-106.935,0,-75.7204	0/1:151:60,91:60:2100:91:3226:-245.108,0,-143.812	0/1:101:38,63:38:1355:63:2244:-171.82,0,-91.8457	1/1:125:11,114:11:392:114:4044:-328.529,-2.00869,0	0/1:206:88,118:88:3128:118:4206:-316.709,0,-219.736	1/1:815:5,809:5:180:809:28749:-2570.03,-228.846,0	0/1:160:61,99:61:2155:99:3504:-267.409,0,-146.05	0/1:40:6,34:6:212:34:1213:-97.434,0,-7.37925	1/1:418:4,413:4:140:413:14664:-1306.57,-112.943,0	0/1:94:17,77:17:593:77:2743:-218.816,0,-25.3979	0/1:38:21,17:21:735:17:595:-42.4375,0,-55.0323	1/1:464:1,463:1:36:463:16395:-1471.64,-136.08,0	1/1:320:2,318:2:72:318:11279:-1008.16,-89.4929,0	0/1:87:38,49:38:1353:49:1721:-128.983,0,-95.8788	0/1:211:133,78:133:4744:78:2748:-184.045,0,-363.603	1/1:282:3,279:3:108:279:9854:-876.742,-74.8153,0	0/1:110:54,56:54:1910:56:1987:-145.99,0,-139.063	0/1:165:22,143:22:788:143:5041:-404.173,0,-21.5748	0/1:63:22,41:22:784:41:1460:-112.731,0,-51.919	0/1:71:9,62:9:324:62:2207:-177.522,0,-8.13272	0/1:146:51,95:51:1815:95:3336:-256.507,0,-119.68	0/1:140:17,123:17:608:123:4339:-348.5,0,-12.9078	1/1:169:4,165:4:144:165:5815:-510.159,-37.5605,0	0/1:105:20,85:20:720:85:3022:-240.603,0,-33.5206	0/1:91:37,54:37:1332:54:1881:-142.173,0,-92.7887	1/1:585:1,583:1:36:583:20537:-1844.28,-172.543,0	0/1:132:16,115:16:576:115:4016:-321.84,0,-12.3802	0/1:52:6,46:6:216:46:1630:-131.334,0,-4.13695	0/1:110:47,63:47:1677:63:2228:-167.669,0,-118.102	0/1:79:13,66:13:468:66:2344:-187.439,0,-18.6783	0/1:123:23,100:23:828:100:3547:-282.411,0,-37.8174	0/1:93:21,72:21:752:72:2555:-202.205,0,-40.0105	1/1:570:4,566:4:144:566:20106:-1795.75,-158.273,0	0/1:79:20,59:20:705:59:2089:-164.497,0,-39.9914	0/1:94:52,41:52:1839:41:1451:-102.53,0,-137.434	0/1:201:92,109:92:3296:109:3878:-288.709,0,-236.352	0/1:117:45,71:45:1620:71:2523:-192.151,0,-110.918	0/1:48:20,28:20:720:28:1004:-76.2264,0,-50.6793	0/1:49:17,32:17:612:32:1148:-88.8794,0,-40.663	0/1:236:172,64:172:6115:64:2270:-133.519,0,-478.982	0/1:44:14,30:14:500:30:1047:-81.2939,0,-32.0909	0/1:152:111,41:111:3905:41:1445:-84.5873,0,-305.889	0/1:124:91,33:91:3211:33:1163:-67.6484,0,-251.885	0/1:347:72,275:72:2515:275:9753:-773.272,0,-122.144	0/1:410:90,320:90:3177:320:11303:-893.748,0,-162.727	0/1:160:117,43:117:4092:43:1536:-90.3683,0,-320.303	0/1:14:12,2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chr10	4155415	.	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chr10	4214942	.	C	T	188788	PASS	AB=0.529826;ABP=51.3255;AC=138;AF=0.734043;AN=188;AO=9020;CIGAR=1X;DP=11989;DPB=11989;DPRA=32.2177;EPP=19528.9;EPPR=6430.58;GTI=0;LEN=1;MEANALT=1.01075;MQM=59.9713;MQMR=59.9778;NS=94;NUMALT=1;ODDS=2.02724;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=321808;QR=106034;RO=2968;RPL=9014;RPP=19537.6;RPPR=6430.58;RPR=6;RUN=1;SAF=1;SAP=19581;SAR=9019;SRF=0;SRP=6447.94;SRR=2968;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:39:23,16:23:820:16:557:-38.7154,0,-62.3823	1/1:167:0,167:0:0:167:5974:-537.763,-50.272,0	1/1:130:0,130:0:0:130:4637:-417.493,-39.1339,0	0/1:285:150,135:150:5361:135:4825:-348.61,0,-396.828	0/1:73:41,32:41:1453:32:1122:-79.3086,0,-109.089	0/1:63:23,40:23:809:40:1417:-108.86,0,-54.1634	0/1:199:108,91:108:3853:91:3260:-233.716,0,-287.06	0/1:227:116,111:116:4141:111:3965:-288.706,0,-304.539	0/1:145:69,76:69:2465:76:2722:-201.555,0,-178.452	0/1:150:59,91:59:2120:91:3264:-248.823,0,-145.914	1/1:75:0,75:0:0:75:2700:-243.243,-22.5773,0	0/1:73:41,32:41:1460:32:1140:-80.934,0,-109.721	1/1:114:0,114:0:0:114:4067:-366.217,-34.3174,0	1/1:90:0,90:0:0:90:3240:-291.82,-27.0927,0	1/1:117:0,117:0:0:117:4156:-374.223,-35.2205,0	1/1:79:0,79:0:0:79:2840:-255.838,-23.7814,0	1/1:87:0,87:0:0:87:3132:-282.105,-26.1896,0	1/1:136:0,136:0:0:136:4879:-439.259,-40.9401,0	0/1:63:31,32:31:1112:32:1144:-84.3046,0,-81.4261	0/1:235:107,128:107:3835:128:4558:-339.642,0,-274.601	0/1:152:62,90:62:2224:90:3198:-242.262,0,-154.668	1/1:83:0,83:0:0:83:2961:-266.722,-24.9855,0	1/1:139:1,138:1:36:138:4925:-439.8,-38.2449,0	1/1:187:5,182:5:180:182:6518:-570.145,-39.7405,0	0/1:83:36,47:36:1277:47:1692:-127.581,0,-90.2456	1/1:506:0,506:0:0:506:17967:-1616.63,-152.321,0	0/1:332:159,173:159:5670:173:6220:-459.949,0,-410.448	0/1:51:24,27:24:864:27:972:-72.4454,0,-62.73	0/1:313:115,198:115:4117:198:7060:-541.235,0,-276.472	0/1:185:109,76:109:3882:76:2702:-187.731,0,-293.882	1/1:159:0,159:0:0:159:5650:-508.619,-47.8638,0	1/1:11:0,11:0:0:11:381:-34.6206,-3.31133,0	0/1:15:10,5:10:345:5:180:-12.0366,0,-26.8654	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	1/1:331:1,330:1:21:330:11808:-1060.47,-97.541,0	0/1:216:71,145:71:2540:145:5105:-394.574,0,-163.829	0/1:84:39,45:39:1385:45:1599:-118.913,0,-99.6603	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/1:191:89,102:89:3177:102:3630:-269.406,0,-228.656	0/1:53:30,23:30:1057:23:828:-58.8895,0,-79.4844	0/1:166:87,79:87:3116:79:2802:-202.444,0,-230.696	0/1:114:58,56:58:2080:56:2002:-146.136,0,-153.153	1/1:84:0,84:0:0:84:2989:-269.24,-25.2865,0	0/1:134:67,67:67:2392:67:2385:-174.568,0,-175.198	1/1:55:0,55:0:0:55:1976:-178.115,-16.5567,0	0/1:230:93,137:93:3301:137:4920:-373.712,0,-228.054	0/1:177:93,84:93:3325:84:3001:-217.038,0,-246.184	1/1:244:0,244:0:0:244:8745:-787.034,-73.4513,0	0/1:256:109,146:109:3908:146:5199:-390.924,0,-274.79	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/1:140:67,73:67:2396:73:2580:-190.301,0,-173.753	1/1:101:0,101:0:0:101:3632:-327.083,-30.404,0	1/1:23:0,23:0:0:23:824:-74.4833,-6.92369,0	1/1:123:1,122:1:36:122:4342:-387.356,-33.4284,0	0/1:60:22,38:22:777:38:1345:-103.286,0,-52.1862	1/1:13:0,13:0:0:13:453:-41.0996,-3.91339,0	0/0:13:12,1:12:423:1:36:0,-0.315115,-34.8068	0/1:43:23,20:23:824:20:720:-52.1845,0,-61.539	0/1:141:58,83:58:2080:83:2988:-226.703,0,-145.025	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	0/1:228:102,126:102:3634:126:4434:-330.593,0,-258.628	1/1:230:0,230:0:0:230:8256:-743.047,-69.2369,0	0/1:42:18,24:18:635:24:847:-63.9049,0,-44.8337	1/1:91:0,91:0:0:91:3203:-288.489,-27.3937,0	0/1:243:116,127:116:4160:127:4530:-334.713,0,-301.43	1/1:48:0,48:0:0:48:1707:-153.916,-14.4494,0	1/1:34:0,34:0:0:34:1224:-110.467,-10.235,0	1/1:123:2,121:2:68:121:4333:-383.686,-30.569,0	1/1:92:0,92:0:0:92:3293:-296.587,-27.6948,0	1/1:18:0,18:0:0:18:644:-58.2906,-5.41854,0	1/1:106:0,106:0:0:106:3793:-341.566,-31.9092,0	1/1:100:0,100:0:0:100:3557:-320.333,-30.103,0	1/1:255:0,255:0:0:255:9131:-821.758,-76.7627,0	1/1:234:0,234:0:0:234:8278:-744.856,-70.441,0	1/1:144:0,144:0:0:144:5047:-454.374,-43.3483,0	1/1:225:0,225:0:0:225:8001:-720.107,-67.7318,0	1/1:30:0,30:0:0:30:1076:-97.1529,-9.0309,0	1/1:187:2,185:2:72:185:6567:-584.275,-49.4559,0	0/1:120:69,51:69:2480:51:1783:-124.623,0,-187.329	0/1:257:115,142:115:4121:142:5096:-381.417,0,-293.707	1/1:140:0,140:0:0:140:5024:-452.291,-42.1442,0	1/1:94:1,93:1:36:93:3322:-295.562,-24.6985,0	1/1:187:0,187:0:0:187:6716:-604.512,-56.2926,0	0/1:223:103,120:103:3693:120:4262:-316.628,0,-265.44	1/1:69:0,69:0:0:69:2472:-222.734,-20.7711,0	0/1:104:45,59:45:1601:59:2111:-158.951,0,-113.071	0/1:102:48,54:48:1720:54:1923:-142.64,0,-124.38	0/1:54:26,28:26:936:28:1001:-74.1492,0,-68.3038	0/1:81:41,40:41:1468:40:1440:-105.514,0,-108.033	0/1:94:54,40:54:1936:40:1432:-100.878,0,-146.22	1/1:97:0,97:0:0:97:3451:-310.792,-29.1999,0	1/1:152:0,152:0:0:152:5456:-491.167,-45.7566,0
chr10	4418924	.	A	G	108335	PASS	AB=0.467553;ABP=38.0985;AC=112;AF=0.595745;AN=188;AO=4300;CIGAR=1X;DP=6889;DPB=6889;DPRA=2.95226;EPP=259.014;EPPR=44.0064;GTI=5;LEN=1;MEANALT=1.02151;MQM=59.9126;MQMR=55.4484;NS=94;NUMALT=1;ODDS=0.593369;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=153134;QR=91827;RO=2587;RPL=4270;RPP=9081.58;RPPR=4424.04;RPR=30;RUN=1;SAF=1766;SAP=300.868;SAR=2534;SRF=1258;SRP=7.24161;SRR=1329;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:29:18,11:18:644:11:396:-27.2351,0,-49.0862	1/1:58:2,56:2:72:56:1973:-171.162,-10.789,0	1/1:71:6,65:6:212:65:2316:-189.43,-2.10845,0	0/1:86:65,21:65:2312:21:754:-42.2983,0,-181.838	0/1:34:27,7:27:956:7:248:-12.4292,0,-75.948	0/1:41:28,13:28:996:13:464:-29.7553,0,-76.5084	0/1:81:54,27:54:1923:27:950:-61.43,0,-148.851	0/1:73:40,33:40:1393:33:1165:-83.1798,0,-102.875	0/1:61:39,22:39:1396:22:780:-52.1602,0,-107.419	0/1:72:55,17:55:1965:17:599:-32.5639,0,-155.151	0/1:107:16,91:16:564:91:3247:-260.241,0,-17.553	0/1:103:46,57:46:1622:57:2036:-152.506,0,-114.473	1/1:156:11,145:11:392:145:5163:-430.143,-12.2934,0	1/1:158:12,146:12:428:146:5213:-430.954,-9.20985,0	1/1:130:8,122:8:284:122:4349:-365.932,-13.481,0	1/1:105:8,97:8:288:97:3449:-284.705,-5.68959,0	1/1:90:3,87:3:108:87:3124:-271.311,-17.0175,0	1/1:110:2,108:2:72:108:3828:-338.21,-26.6085,0	0/1:84:55,29:55:1967:29:1040:-68.6278,0,-150.734	0/1:75:54,21:54:1921:21:756:-45.79,0,-150.586	0/1:76:34,42:34:1197:42:1495:-111.966,0,-84.8513	0/1:15:4,11:4:144:11:396:-31.4673,0,-8.7248	0/1:40:7,33:7:248:33:1179:-94.376,0,-10.2847	0/1:66:13,53:13:453:53:1884:-149.968,0,-20.9714	0/1:26:18,8:18:648:8:279:-17.6208,0,-50.5651	1/1:88:3,85:3:108:85:3003:-260.48,-16.4895,0	0/1:85:49,36:49:1744:36:1275:-89.4647,0,-131.484	0/1:66:37,28:37:1298:28:986:-69.2124,0,-97.1081	1/1:73:4,69:4:144:69:2459:-208.285,-8.69826,0	0/1:47:31,16:31:1108:16:568:-37.3035,0,-85.4142	1/1:49:3,46:3:108:46:1644:-138.29,-4.79173,0	0/1:21:14,7:14:504:7:243:-15.8859,0,-38.7582	0/0:65:61,4:61:2151:4:144:0,-6.25333,-177.062	0/0:111:110,1:110:3894:1:36:0,-29.8161,-335.061	0/0:45:41,4:41:1468:4:140:0,-0.601772,-113.657	0/0:61:60,1:60:2125:1:36:0,-14.7646,-183.697	1/1:224:6,218:6:216:218:7742:-677.134,-47.7493,0	0/1:26:16,10:16:568:10:360:-24.9175,0,-43.5385	0/1:130:91,39:91:3231:39:1392:-86.4369,0,-247.749	0/0:25:25,0:25:896:0:0:0,-7.52575,-79.7938	0/1:82:50,32:50:1780:32:1131:-77.4133,0,-134.804	0/1:56:31,25:31:1104:25:896:-64.1027,0,-82.6403	0/1:78:53,25:53:1892:25:892:-57.1193,0,-145.459	0/1:99:60,39:60:2116:39:1396:-96.1371,0,-159.719	1/1:94:0,94:0:0:94:3337:-300.529,-28.2968,0	0/1:37:27,10:27:964:10:352:-20.8801,0,-75.8063	0/1:49:15,34:15:540:34:1212:-94.6359,0,-32.6024	0/1:35:9,26:9:294:26:919:-72.4901,0,-15.9426	0/1:29:17,12:17:608:12:428:-30.1289,0,-46.3151	0/1:64:8,56:8:288:56:2008:-161.723,0,-6.55424	0/1:58:40,18:40:1424:18:644:-40.8309,0,-110.926	0/0:87:84,3:84:2990:3:108:0,-16.1144,-256.094	0/1:57:43,14:43:1544:14:485:-26.8185,0,-121.464	0/1:22:6,16:6:216:16:568:-44.8292,0,-13.0588	0/1:25:22,3:22:784:3:108:-2.54942,0,-62.0942	0/1:64:13,51:13:468:51:1828:-145.535,0,-20.239	0/1:16:12,4:12:432:4:144:-8.49714,0,-34.1781	0/0:25:23,2:23:792:2:72:0,-0.689027,-63.2137	0/1:24:21,3:21:748:3:108:-2.85045,0,-60.3332	0/1:26:17,9:17:596:9:320:-21.3156,0,-46.141	1/1:119:2,117:2:72:117:4153:-367.117,-28.9858,0	0/0:17:16,1:16:572:1:36:0,-1.51923,-47.7307	0/1:49:30,19:30:1080:19:680:-46.7787,0,-82.7619	1/1:79:4,75:4:144:75:2664:-227.451,-11.2265,0	0/1:39:28,11:28:996:11:396:-24.2426,0,-77.9556	0/1:36:10,26:10:360:26:922:-72.4599,0,-21.679	0/1:66:46,20:46:1648:20:720:-45.2608,0,-128.09	0/1:41:4,37:4:144:37:1328:-107.475,0,-0.855994	0/1:105:27,78:27:942:78:2796:-220.27,0,-51.0724	1/1:37:1,36:1:36:36:1279:-111.813,-7.53984,0	1/1:145:5,140:5:180:140:5018:-435.25,-27.1338,0	0/1:34:20,14:20:712:14:504:-35.4631,0,-53.2176	1/1:14:0,14:0:0:14:485:-43.9767,-4.21442,0	0/1:49:5,44:5:171:44:1576:-127.381,0,-0.468684	1/1:68:2,66:2:72:66:2363:-206.091,-13.6333,0	0/1:81:11,70:11:396:70:2494:-200.289,0,-11.3094	0/1:36:4,32:4:144:32:1131:-91.2607,0,-2.47654	1/1:82:3,79:3:100:79:2828:-245.457,-15.4271,0	0/1:34:28,6:28:983:6:212:-9.18978,0,-76.2552	0/1:66:20,46:20:712:46:1631:-127.21,0,-44.0243	0/1:75:52,23:52:1844:23:812:-50.8237,0,-140.829	0/1:111:79,32:79:2778:32:1148:-70.2155,0,-215.882	1/1:108:7,100:7:252:100:3558:-297.517,-9.61987,0	1/1:131:8,123:8:288:123:4375:-367.817,-13.3272,0	1/1:114:1,113:1:36:113:4011:-357.484,-30.7813,0	0/1:209:121,88:121:4267:88:3152:-220.99,0,-320.218	1/1:44:2,42:2:72:42:1495:-128.149,-6.74048,0	0/1:97:49,48:49:1743:48:1707:-124.707,0,-127.323	0/1:99:50,49:50:1774:49:1752:-128.162,0,-128.816	0/1:126:76,50:76:2703:50:1784:-122.755,0,-204.789	0/1:147:81,66:81:2864:66:2363:-168.677,0,-213.451	0/1:72:46,26:46:1623:26:923:-61.7126,0,-124.639	1/1:67:5,62:5:176:62:2224:-184.242,-3.98638,0	1/1:202:17,185:17:595:185:6547:-535.441,-7.13639,0
chr10	4418949	.	A	T	13579.7	PASS	AB=0.452084;ABP=39.843;AC=42;AF=0.223404;AN=188;AO=848;CIGAR=1X;DP=4445;DPB=4445;DPRA=1.13538;EPP=1758.58;EPPR=3981.02;GTI=0;LEN=1;MEANALT=1;MQM=59.895;MQMR=58.2349;NS=94;NUMALT=1;ODDS=1.41108;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=30291;QR=128614;RO=3597;RPL=838;RPP=1758.58;RPPR=2864.1;RPR=10;RUN=1;SAF=0;SAP=1844.42;SAR=848;SRF=197;SRP=6196.39;SRR=3400;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:16:9,7:9:320:7:252:-18.2125,0,-24.3047	0/0:40:39,1:39:1392:1:36:0,-8.44292,-121.185	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:45:26,19:26:928:19:680:-47.9828,0,-62.5136	0/1:23:13,10:13:468:10:360:-25.8206,0,-34.2515	0/1:27:13,14:13:468:14:504:-36.9394,0,-34.3318	0/1:52:23,29:23:820:29:1040:-78.2608,0,-58.4624	0/1:48:30,18:30:1059:18:640:-43.4799,0,-78.6143	0/1:41:18,23:18:644:23:828:-62.5019,0,-44.4363	0/1:40:19,21:19:680:21:752:-55.9651,0,-49.3851	0/0:83:81,2:81:2904:2:72:0,-18.1488,-253.904	0/1:53:35,18:35:1244:18:648:-42.6964,0,-94.9147	0/0:75:74,1:74:2648:1:36:0,-18.979,-232.855	0/0:112:112,0:112:3984:0:0:0,-33.7154,-357.381	0/0:74:74,0:74:2664:0:0:0,-22.2762,-239.952	0/0:71:71,0:71:2533:0:0:0,-21.3731,-228.068	0/0:77:76,1:76:2724:1:36:0,-19.581,-240.529	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.594	0/1:65:40,25:40:1432:25:885:-60.3996,0,-108.783	0/1:62:25,37:25:892:37:1324:-100.798,0,-55.8287	0/1:41:29,12:29:1032:12:428:-26.5166,0,-79.4286	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.9959	0/0:18:18,0:18:648:0:0:0,-5.41854,-54.7616	0/1:46:38,8:38:1344:8:269:-10.688,0,-106.474	0/1:13:7,6:7:248:6:216:-15.8771,0,-18.7504	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.192	0/1:51:21,30:21:752:30:1064:-80.6493,0,-52.6537	0/1:44:28,16:28:1004:16:576:-38.9297,0,-77.251	0/0:49:49,0:49:1737:0:0:0,-14.7505,-156.61	0/1:29:15,14:15:540:14:504:-36.9682,0,-40.2067	0/0:34:34,0:34:1212:0:0:0,-10.235,-108.108	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:43:42,1:42:1504:1:34:0,-9.54538,-132.113	0/0:63:63,0:63:2252:0:0:0,-18.9649,-196.08	0/0:26:26,0:26:928:0:0:0,-7.82678,-79.2089	0/0:47:47,0:47:1680:0:0:0,-14.1484,-139.557	0/0:113:113,0:113:4052:0:0:0,-34.0164,-364.863	0/1:20:11,9:11:396:9:324:-23.4853,0,-29.9621	0/1:88:51,37:51:1821:37:1322:-92.7915,0,-136.168	0/1:16:14,2:14:496:2:72:-2.02024,0,-40.1125	0/1:45:18,27:18:644:27:964:-73.5305,0,-44.7442	0/1:34:15,19:15:536:19:684:-51.6553,0,-38.2231	0/1:55:31,24:31:1112:24:844:-59.7223,0,-82.5565	0/1:65:43,22:43:1544:22:777:-50.6834,0,-119.522	0/0:61:61,0:61:2196:0:0:0,-18.3628,-195.307	0/1:20:11,9:11:392:9:318:-22.9208,0,-29.5542	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/0:24:24,0:24:841:0:0:0,-7.22472,-74.6372	0/1:17:9,8:9:316:8:284:-20.7858,0,-23.6605	0/0:62:62,0:62:2216:0:0:0,-18.6639,-198.267	0/1:39:14,25:14:504:25:896:-69.2202,0,-33.9015	0/0:90:89,1:89:3188:1:36:0,-23.4944,-280.591	0/1:28:10,18:10:352:18:644:-49.8618,0,-22.3016	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.4218	0/0:21:21,0:21:752:0:0:0,-6.32163,-62.8849	0/0:35:35,0:35:1248:0:0:0,-10.536,-112.622	0/1:7:4,3:4:140:3:108:-7.96796,0,-10.675	0/0:15:15,0:15:536:0:0:0,-4.51545,-47.0607	0/1:21:17,4:17:599:4:144:-6.99199,0,-47.9137	0/1:21:11,10:11:396:10:360:-26.4227,0,-29.5847	0/0:85:84,1:84:3004:1:36:0,-21.9893,-266.055	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4366	0/1:26:17,9:17:608:9:320:-21.3156,0,-47.2252	0/0:61:61,0:61:2176:0:0:0,-18.3628,-196.054	0/1:31:14,17:14:500:17:593:-44.3628,0,-36.0027	0/0:33:33,0:33:1180:0:0:0,-9.93399,-102.672	0/1:41:14,27:14:500:27:964:-74.7346,0,-31.9147	0/0:24:24,0:24:848:0:0:0,-7.22472,-76.6391	0/0:80:80,0:80:2868:0:0:0,-24.0824,-256.997	0/0:31:31,0:31:1100:0:0:0,-9.33193,-98.0321	0/0:115:115,0:115:4124:0:0:0,-34.6184,-371.336	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.4842	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:32:32,0:32:1152:0:0:0,-9.63296,-102.606	0/0:47:46,1:46:1640:1:36:0,-10.5501,-140.729	0/0:57:56,1:56:2004:1:21:0,-15.059,-174.589	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:53:53,0:53:1892:0:0:0,-15.9546,-170.558	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6947	0/0:53:53,0:53:1892:0:0:0,-15.9546,-169.123	0/1:49:30,19:30:1068:19:676:-46.4175,0,-78.9232	0/1:68:33,35:33:1172:35:1256:-92.8752,0,-85.289	0/0:72:71,1:71:2552:1:36:0,-18.0759,-224.949	0/0:75:74,1:74:2648:1:36:0,-18.979,-234.82	0/0:87:87,0:87:3111:0:0:0,-26.1896,-278.737	0/1:114:64,50:64:2292:50:1788:-126.885,0,-169.588	0/0:25:25,0:25:885:0:0:0,-7.52575,-79.7761	0/1:56:36,20:36:1292:20:716:-47.91,0,-98.4404	0/1:58:39,19:39:1400:19:680:-44.0694,0,-105.963	0/1:99:56,43:56:2004:43:1544:-109.451,0,-150.269	0/1:92:40,52:40:1436:52:1872:-141.064,0,-100.56	0/1:41:21,20:21:756:20:720:-52.7865,0,-55.9345	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.774	0/0:99:98,1:98:3496:1:36:0,-26.2037,-311.069
chr10	4534649	.	T	A	191560	PASS	AB=0.50568;ABP=4.53964;AC=143;AF=0.760638;AN=188;AO=8965;CIGAR=1X;DP=11689;DPB=11689;DPRA=0;EPP=19314.2;EPPR=5853.11;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.8347;MQMR=59.9533;NS=94;NUMALT=1;ODDS=2.37958;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=321076;QR=97577;RO=2722;RPL=8947;RPP=19314.2;RPPR=5853.11;RPR=18;RUN=1;SAF=0;SAP=19470.3;SAR=8965;SRF=0;SRP=5913.76;SRR=2722;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:25,28:25:900:28:1004:-74.7151,0,-65.3664	1/1:226:1,225:1:36:225:8071:-722.748,-64.4345,0	1/1:164:1,163:1:36:163:5847:-522.721,-45.7706,0	0/1:224:107,117:107:3802:117:4177:-308.679,0,-274.944	0/1:108:62,46:62:2224:46:1643:-115.646,0,-167.913	0/1:77:34,43:34:1224:43:1538:-115.533,0,-87.2877	0/1:215:107,108:107:3820:108:3859:-282.479,0,-279.248	0/1:186:89,97:89:3162:97:3467:-256.231,0,-228.811	0/1:105:49,56:49:1756:56:1988:-147.579,0,-126.716	0/1:122:54,68:54:1944:68:2426:-181.869,0,-138.51	1/1:78:0,78:0:0:78:2795:-251.771,-23.4803,0	0/1:65:29,36:29:1036:36:1279:-95.1565,0,-73.0478	1/1:81:0,81:0:0:81:2912:-262.312,-24.3834,0	1/1:94:0,94:0:0:94:3354:-302.063,-28.2968,0	1/1:55:0,55:0:0:55:1978:-178.295,-16.5567,0	1/1:130:0,130:0:0:130:4676:-420.914,-39.1339,0	1/1:84:0,84:0:0:84:3013:-271.389,-25.2865,0	1/1:51:0,51:0:0:51:1832:-165.15,-15.3525,0	0/1:34:15,19:15:540:19:680:-51.2941,0,-38.7015	0/1:302:178,124:178:6396:124:4435:-308.388,0,-484.815	0/1:131:62,69:62:2212:69:2470:-183.033,0,-159.91	1/1:151:0,151:0:0:151:5419:-487.836,-45.4555,0	1/1:110:1,109:1:36:109:3916:-349.02,-29.515,0	1/1:169:9,160:9:324:160:5757:-487.957,-21.3682,0	0/1:80:46,34:46:1644:34:1220:-86.0182,0,-124.165	1/1:402:2,399:2:57:399:14283:-1279.35,-115.673,0	0/1:298:137,161:137:4916:161:5766:-429.318,0,-352.692	0/1:33:19,14:19:684:14:504:-35.7641,0,-51.9563	1/1:369:1,368:1:36:368:13182:-1182.57,-107.482,0	0/1:169:86,83:86:3096:83:2968:-216.472,0,-227.992	1/1:160:1,159:1:36:159:5696:-509.158,-44.5665,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:41:9,32:9:324:32:1148:-91.2876,0,-17.1636	1/1:14:0,14:0:0:14:502:-45.5172,-4.21442,0	1/1:18:0,18:0:0:18:648:-58.6488,-5.41854,0	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	1/1:187:0,187:0:0:187:6720:-604.872,-56.2926,0	0/1:295:155,140:155:5568:140:5004:-361.704,0,-412.437	0/1:59:28,31:28:1008:31:1116:-82.9909,0,-73.2756	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:200:107,93:107:3833:93:3321:-238.807,0,-284.958	0/1:34:18,16:18:648:16:572:-41.5784,0,-48.4169	0/1:188:85,103:85:3056:103:3684:-275.17,0,-218.675	0/1:70:27,43:27:972:43:1531:-117.01,0,-66.7082	1/1:64:0,64:0:0:64:2295:-206.81,-19.2659,0	0/1:85:30,55:30:1080:55:1972:-152.167,0,-71.9253	1/1:197:0,197:0:0:197:7043:-633.896,-59.3029,0	1/1:240:2,238:2:68:238:8451:-753.758,-65.7895,0	0/1:134:75,59:75:2692:59:2120:-150.73,0,-202.186	1/1:173:0,173:0:0:173:6188:-556.793,-52.0782,0	0/1:239:140,99:140:5028:99:3545:-247.312,0,-380.718	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/1:178:82,96:82:2952:96:3456:-257.667,0,-212.329	1/1:89:0,89:0:0:89:3192:-287.501,-26.7917,0	1/1:51:0,51:0:0:51:1832:-165.104,-15.3525,0	1/1:126:0,126:0:0:126:4521:-407.036,-37.9298,0	0/1:54:31,23:31:1112:23:828:-58.5885,0,-84.1357	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:42:20,22:20:720:22:788:-58.6015,0,-52.4855	0/1:53:26,27:26:928:27:968:-71.4766,0,-67.8837	1/1:164:2,162:2:72:162:5819:-516.966,-42.5322,0	0/1:18:14,4:14:500:4:144:-7.89508,0,-39.9176	0/1:236:114,122:114:4069:122:4364:-321.865,0,-295.353	1/1:324:2,322:2:68:322:11507:-1029.02,-91.076,0	0/1:94:56,38:56:2012:38:1364:-94.7463,0,-153.056	1/1:153:0,153:0:0:153:5482:-493.453,-46.0576,0	0/1:230:126,104:126:4505:104:3727:-266.393,0,-336.372	1/1:158:0,158:0:0:158:5668:-510.21,-47.5627,0	1/1:33:0,33:0:0:33:1182:-106.685,-9.93399,0	1/1:110:0,109:0:0:109:3912:-351.466,-32.8123,0	1/1:76:0,76:0:0:76:2732:-246.122,-22.8783,0	1/1:22:0,22:0:0:22:788:-71.2163,-6.62266,0	1/1:144:0,144:0:0:144:5139:-462.628,-43.3483,0	1/1:99:0,99:0:0:99:3547:-319.115,-29.802,0	1/1:212:0,212:0:0:212:7591:-683.208,-63.8184,0	1/1:212:1,211:1:36:211:7572:-677.734,-60.2201,0	1/1:126:0,126:0:0:126:4510:-406.043,-37.9298,0	1/1:140:1,139:1:36:139:4949:-441.793,-38.5459,0	1/1:37:0,37:0:0:37:1318:-118.921,-11.1381,0	1/1:170:0,170:0:0:170:6090:-548.12,-51.1751,0	0/1:82:43,39:43:1548:39:1400:-101.611,0,-114.929	0/1:372:149,223:149:5344:223:7999:-607.889,0,-369.109	1/1:93:0,93:0:0:93:3336:-300.457,-27.9958,0	1/1:58:0,58:0:0:58:2088:-188.166,-17.4597,0	1/1:82:0,82:0:0:82:2937:-264.561,-24.6845,0	0/1:119:46,73:46:1656:73:2612:-199.505,0,-113.506	1/1:43:0,43:0:0:43:1535:-138.442,-12.9443,0	0/1:93:45,48:45:1620:48:1724:-127.45,0,-118.094	0/1:79:35,44:35:1260:44:1567:-117.451,0,-89.9241	0/1:58:31,27:31:1112:27:968:-69.9776,0,-82.9316	0/1:116:55,61:55:1976:61:2188:-162.266,0,-143.195	0/1:61:40,21:40:1425:21:756:-50.0044,0,-110.183	1/1:179:0,179:0:0:179:6428:-578.56,-53.8844,0	1/1:85:0,85:0:0:85:3021:-272.051,-25.5876,0
chr10	4534655	.	A	T	46140.6	PASS	AB=0.497273;ABP=3.36563;AC=45;AF=0.239362;AN=188;AO=2761;CIGAR=1X;DP=11738;DPB=11738;DPRA=1.42872;EPP=5998.45;EPPR=19492;GTI=1;LEN=1;MEANALT=1.01724;MQM=59.937;MQMR=59.8403;NS=94;NUMALT=1;ODDS=1.63257;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=98667;QR=321159;RO=8975;RPL=2761;RPP=5998.45;RPPR=19492;RPR=0;RUN=1;SAF=0;SAP=5998.45;SAR=2761;SRF=0;SRP=19492;SRR=8975;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:28,25:28:1004:25:895:-64.9157,0,-74.7151	0/0:226:224,1:224:8011:1:36:0,-64.4384,-717.403	0/0:162:161,1:161:5745:1:36:0,-45.1686,-513.532	0/1:230:121,109:121:4299:109:3913:-283.123,0,-317.848	0/1:109:45,64:45:1620:64:2276:-172.279,0,-113.276	0/1:78:43,35:43:1548:35:1229:-87.431,0,-116.133	0/1:213:107,106:107:3814:106:3804:-278.409,0,-278.509	0/1:181:95,86:95:3416:86:3050:-220.241,0,-253.158	0/1:105:55,50:55:1953:50:1800:-130.674,0,-144.43	0/1:122:68,54:68:2448:54:1944:-138.51,0,-183.849	0/0:78:78,0:78:2804:0:0:0,-23.4803,-252.564	0/1:66:36,30:36:1288:30:1080:-76.7062,0,-95.667	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.953	0/0:93:93,0:93:3332:0:0:0,-27.9958,-300.009	0/0:55:55,0:55:1965:0:0:0,-16.5566,-177.123	0/0:129:129,0:129:4606:0:0:0,-38.8329,-414.644	0/0:84:84,0:84:3008:0:0:0,-25.2865,-270.899	0/0:51:51,0:51:1836:0:0:0,-15.3525,-165.51	0/1:35:19,16:19:669:16:557:-39.9195,0,-49.9979	0/1:308:124,184:124:4445:184:6562:-497.944,0,-307.479	0/1:132:69,63:69:2484:63:2249:-162.935,0,-183.991	0/0:153:153,0:153:5444:0:0:0,-46.0576,-490.077	0/0:113:112,1:112:4009:1:36:0,-30.4181,-357.392	0/0:169:160,9:160:5748:9:324:0,-21.3682,-486.94	0/1:80:34,46:34:1224:46:1630:-122.904,0,-86.3785	0/0:400:398,2:398:14230:2:72:0,-113.575,-1272.94	0/1:300:161,139:161:5761:139:4936:-354.05,0,-428.267	0/1:33:14,19:14:504:19:680:-51.5952,0,-35.7641	0/0:372:372,0:372:13357:0:0:0,-111.983,-1201.9	0/1:169:83,86:83:2984:86:3062:-224.932,0,-217.864	0/0:161:159,2:159:5625:2:72:0,-41.6291,-499.533	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/1:41:32,9:32:1152:9:324:-17.1636,0,-91.6479	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4103	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	0/0:189:189,0:189:6800:0:0:0,-56.8947,-612.067	0/1:301:143,158:143:5121:158:5655:-418.457,0,-370.42	0/1:60:32,28:32:1152:28:1008:-72.9746,0,-85.9274	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:200:90,110:90:3161:110:3911:-291.965,0,-224.412	0/1:35:16,19:16:576:19:669:-49.9979,0,-41.6389	0/1:190:103,87:103:3700:87:3110:-222.931,0,-276.005	0/1:70:44,26:44:1554:26:932:-63.1091,0,-119.076	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/1:87:55,32:55:1972:32:1142:-76.8994,0,-151.565	0/0:199:198,1:198:7040:1:28:0,-57.1055,-630.792	0/0:239:237,2:237:8472:2:72:0,-65.1094,-754.745	0/1:134:58,76:58:2084:76:2721:-204.793,0,-147.492	0/0:174:173,1:173:6129:1:36:0,-48.7809,-547.573	0/1:236:98,138:98:3509:138:4914:-371.367,0,-244.974	0/1:12:3,9:3:108:9:324:-25.8935,0,-6.46281	0/1:176:96,80:96:3437:80:2868:-205.376,0,-256.56	0/0:90:90,0:90:3221:0:0:0,-27.0927,-290.104	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.629	0/0:127:127,0:127:4530:0:0:0,-38.2308,-407.825	0/1:55:23,32:23:828:32:1137:-86.0803,0,-58.2875	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:44:23,21:23:828:21:752:-54.7609,0,-61.5988	0/1:54:27,27:27:972:27:968:-71.1817,0,-71.5361	0/0:163:162,1:162:5771:1:36:0,-45.4696,-515.887	0/1:18:4,14:4:144:14:500:-39.9176,0,-7.89508	0/1:242:126,116:126:4509:116:4160:-301.733,0,-333.086	0/0:325:323,2:323:11540:2:72:0,-90.998,-1031.61	0/1:95:37,58:37:1309:58:2084:-159.232,0,-89.4941	0/0:153:153,0:153:5483:0:0:0,-46.0576,-493.549	0/1:233:105,128:105:3749:128:4558:-340.245,0,-267.469	0/0:158:158,0:158:5684:0:0:0,-47.5627,-511.647	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:110:110,0:110:3922:0:0:0,-33.1133,-353.138	0/0:77:76,0:76:2732:0:0:0,-22.8783,-245.871	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.5772	0/0:148:148,0:148:5274:0:0:0,-44.5524,-474.772	0/0:98:98,0:98:3516:0:0:0,-29.5009,-316.414	0/0:210:210,0:210:7552:0:0:0,-63.2163,-679.623	0/0:211:209,2:209:7493:2:65:0,-57.5114,-668.382	0/0:123:123,0:123:4405:0:0:0,-37.0267,-396.558	0/0:141:140,1:140:5032:1:36:0,-38.847,-448.247	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.42	0/0:173:173,0:173:6205:0:0:0,-52.0782,-558.334	0/1:82:39,43:39:1385:43:1548:-114.929,0,-100.259	0/1:377:225,152:225:8049:152:5457:-377.768,0,-610.915	0/0:93:93,0:93:3333:0:0:0,-27.9958,-300.185	0/0:58:58,0:58:2073:0:0:0,-17.4597,-186.815	0/0:81:81,0:81:2912:0:0:0,-24.3834,-262.286	0/1:122:75,47:75:2680:47:1688:-115.481,0,-204.72	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/1:92:47,45:47:1673:45:1620:-118.395,0,-123.16	0/1:80:44,36:44:1569:36:1296:-92.8615,0,-117.376	0/1:58:27,31:27:972:31:1116:-83.292,0,-70.3382	0/1:116:60,56:60:2160:56:2001:-145.442,0,-159.747	0/1:62:20,42:20:720:42:1508:-117.351,0,-46.4649	0/0:177:177,0:177:6330:0:0:0,-53.2823,-569.788	0/0:86:86,0:86:3088:0:0:0,-25.8886,-277.608
chr10	4534656	.	A	T	190424	PASS	AB=0.505171;ABP=4.29049;AC=143;AF=0.760638;AN=188;AO=9023;CIGAR=1X;DP=11783;DPB=11783;DPRA=0;EPP=19596.2;EPPR=5987.59;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.8223;MQMR=59.9459;NS=94;NUMALT=1;ODDS=2.18489;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=322052;QR=98442;RO=2756;RPL=9023;RPP=19596.2;RPPR=5987.59;RPR=0;RUN=1;SAF=0;SAP=19596.2;SAR=9023;SRF=0;SRP=5987.59;SRR=2756;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:25,28:25:881:28:1008:-75.0756,0,-63.6513	1/1:227:2,225:2:72:225:8038:-716.54,-61.4971,0	1/1:163:2,161:2:72:161:5777:-513.17,-42.2312,0	0/1:230:108,122:108:3854:122:4339:-321.428,0,-277.815	0/1:109:64,45:64:2268:45:1620:-113.276,0,-171.557	0/1:78:34,44:34:1220:44:1572:-118.291,0,-86.6265	0/1:213:106,107:106:3816:107:3790:-276.556,0,-279.488	0/1:184:88,96:88:3130:96:3452:-255.489,0,-226.534	0/1:108:51,57:51:1813:57:1991:-146.946,0,-130.92	0/1:123:54,69:54:1936:69:2471:-185.616,0,-137.49	1/1:79:0,79:0:0:79:2840:-255.802,-23.7814,0	0/1:66:30,36:30:1061:36:1296:-96.384,0,-75.8244	1/1:81:0,81:0:0:81:2916:-262.672,-24.3834,0	1/1:94:0,93:0:0:93:3348:-301.087,-27.9958,0	1/1:55:0,55:0:0:55:1974:-177.935,-16.5567,0	1/1:131:0,131:0:0:131:4678:-421.11,-39.4349,0	1/1:83:0,83:0:0:83:2969:-267.39,-24.9855,0	1/1:50:0,50:0:0:50:1800:-162.272,-15.0515,0	0/1:35:16,19:16:576:19:684:-51.3543,0,-41.6389	0/1:307:183,124:183:6523:124:4419:-305.44,0,-494.735	0/1:131:62,69:62:2219:69:2454:-181.59,0,-160.539	1/1:153:0,153:0:0:153:5451:-490.708,-46.0576,0	1/1:113:1,112:1:36:112:3994:-356.025,-30.4181,0	1/1:169:9,160:9:320:160:5711:-484.357,-21.7317,0	0/1:80:47,33:47:1662:33:1188:-83.14,0,-125.78	1/1:403:2,401:2:72:401:14291:-1278.49,-114.478,0	0/1:298:138,160:138:4960:160:5700:-423.378,0,-356.47	0/1:33:19,14:19:665:14:504:-35.7641,0,-50.2388	1/1:372:2,370:2:72:370:13194:-1180.41,-105.146,0	0/1:172:88,84:88:3168:84:2979:-216.508,0,-233.566	1/1:161:1,160:1:36:160:5688:-508.437,-44.8676,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:41:9,32:9:324:32:1152:-91.6479,0,-17.1636	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:18:0,18:0:0:18:648:-58.6488,-5.41854,0	0/1:8:2,6:2:72:6:212:-17.0166,0,-4.42848	1/1:189:0,189:0:0:189:6785:-610.718,-56.8947,0	0/1:301:157,144:157:5614:144:5135:-371.678,0,-414.769	0/1:60:28,32:28:1008:32:1137:-84.5751,0,-72.9746	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:201:108,93:108:3850:93:3324:-238.775,0,-286.142	0/1:34:19,15:19:684:15:536:-38.3398,0,-51.6553	0/1:191:86,104:86:3080:104:3694:-275.125,0,-219.892	0/1:70:25,45:25:896:45:1601:-123.306,0,-59.8706	1/1:63:0,63:0:0:63:2268:-204.382,-18.9649,0	0/1:86:31,55:31:1112:55:1961:-150.875,0,-74.5024	1/1:199:0,199:0:0:199:7129:-641.585,-59.905,0	1/1:240:2,238:2:72:238:8422:-750.54,-65.4105,0	0/1:135:75,60:75:2681:60:2137:-151.957,0,-200.894	1/1:175:0,175:0:0:175:6241:-561.544,-52.6803,0	0/1:240:140,100:140:4991:100:3589:-250.967,0,-377.087	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/1:178:82,96:82:2933:96:3452:-257.308,0,-210.619	1/1:90:0,90:0:0:90:3236:-291.454,-27.0927,0	1/1:52:0,52:0:0:52:1853:-166.991,-15.6536,0	1/1:131:0,131:0:0:131:4667:-420.148,-39.4349,0	0/1:55:32,23:32:1152:23:820:-57.5659,0,-87.4335	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:44:21,23:21:756:23:828:-61.5988,0,-55.1219	0/1:54:27,27:27:957:27:957:-70.182,0,-70.1882	1/1:163:2,161:2:72:161:5777:-513.204,-42.2312,0	0/1:18:14,4:14:504:4:144:-7.89508,0,-40.2796	0/1:241:117,124:117:4121:124:4415:-324.938,0,-298.523	1/1:325:2,323:2:72:323:11522:-1029.98,-90.998,0	0/1:96:58,38:58:2084:38:1360:-93.7835,0,-158.931	1/1:152:0,152:0:0:152:5419:-487.791,-45.7566,0	0/1:228:123,105:123:4394:105:3736:-267.802,0,-326.995	1/1:160:0,160:0:0:160:5752:-517.764,-48.1648,0	1/1:31:1,30:1:36:30:1065:-92.5632,-5.73537,0	1/1:112:0,112:0:0:112:3998:-359.56,-33.7154,0	1/1:77:1,76:1:36:76:2698:-239.464,-19.581,0	1/1:21:0,21:0:0:21:741:-67.0107,-6.32163,0	1/1:148:0,148:0:0:148:5269:-474.322,-44.5524,0	1/1:100:1,99:1:36:99:3545:-315.234,-26.5057,0	1/1:214:0,214:0:0:214:7642:-687.72,-64.4204,0	1/1:213:1,212:1:36:212:7567:-677.284,-60.5211,0	1/1:126:0,126:0:0:126:4505:-405.555,-37.9298,0	1/1:140:1,139:1:36:139:4953:-441.207,-38.5459,0	1/1:38:0,38:0:0:38:1350:-121.799,-11.4391,0	1/1:172:1,171:1:36:171:6082:-543.713,-48.1806,0	0/1:82:43,38:43:1544:38:1368:-98.6742,0,-114.51	0/1:376:149,227:149:5322:227:8010:-607.654,0,-365.924	1/1:94:0,94:0:0:94:3357:-302.345,-28.2968,0	1/1:59:0,58:0:0:58:2076:-186.727,-17.4597,0	1/1:82:0,82:0:0:82:2937:-264.534,-24.6845,0	0/1:122:47,75:47:1673:75:2670:-203.817,0,-114.13	1/1:44:0,44:0:0:44:1580:-142.492,-13.2453,0	0/1:93:45,48:45:1597:48:1709:-126.098,0,-116.022	0/1:81:36,45:36:1296:45:1610:-120.717,0,-92.5605	0/1:57:30,27:30:1076:27:972:-70.6392,0,-79.9941	0/1:117:56,61:56:2004:61:2166:-159.983,0,-145.413	0/1:64:42,22:42:1493:22:792:-52.3398,0,-115.397	1/1:180:0,180:0:0:180:6393:-575.437,-54.1854,0	1/1:86:0,86:0:0:86:3080:-277.027,-25.8886,0
chr10	4717781	.	A	G	182176	PASS	AB=0.491019;ABP=6.71564;AC=143;AF=0.760638;AN=188;AO=8616;CIGAR=1X;DP=11328;DPB=11328;DPRA=0;EPP=18712.4;EPPR=5885.53;GTI=0;LEN=1;MEANALT=1.03191;MQM=59.9918;MQMR=59.9908;NS=94;NUMALT=1;ODDS=4.55124;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=307582;QR=96809;RO=2709;RPL=0;RPP=18712.4;RPPR=5885.53;RPR=8616;RUN=1;SAF=8616;SAP=18712.4;SAR=0;SRF=2709;SRP=5885.53;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:56:22,34:22:784:34:1195:-90.9969,0,-54.0262	1/1:196:0,195:0:0:195:6952:-625.387,-58.7009,0	1/1:167:0,167:0:0:167:5964:-536.869,-50.272,0	0/1:230:121,109:121:4344:109:3886:-280.699,0,-321.897	0/1:72:41,31:41:1468:31:1108:-78.3568,0,-110.742	0/1:59:42,17:42:1504:17:612:-37.6527,0,-117.894	0/1:129:58,71:58:2072:71:2533:-189.387,0,-147.918	0/1:217:118,99:118:4202:99:3533:-252.856,0,-313.036	0/1:73:40,33:40:1440:33:1184:-84.8931,0,-107.923	0/1:135:83,52:83:2957:52:1864:-127.4,0,-225.723	1/1:145:0,145:0:0:145:5150:-463.644,-43.6494,0	0/1:110:44,66:44:1584:66:2352:-178.825,0,-109.421	1/1:93:0,93:0:0:93:3342:-300.996,-27.9958,0	1/1:119:0,119:0:0:119:4209:-378.993,-35.8226,0	1/1:73:0,73:0:0:73:2606:-234.788,-21.9752,0	1/1:79:0,79:0:0:79:2830:-254.939,-23.7814,0	1/1:108:0,108:0:0:108:3863:-347.865,-32.5112,0	1/1:83:0,83:0:0:83:2959:-266.544,-24.9855,0	0/1:80:34,46:34:1201:46:1639:-123.716,0,-84.3113	0/1:271:133,138:133:4760:138:4940:-363.171,0,-346.979	0/1:179:90,89:90:3220:89:3168:-231.462,0,-236.138	1/1:109:0,109:0:0:109:3885:-349.844,-32.8123,0	1/1:66:1,65:1:36:65:2328:-206.182,-16.2697,0	1/1:110:1,109:1:32:109:3889:-347.005,-29.914,0	0/1:50:33,17:33:1184:17:608:-40.0005,0,-91.8168	1/1:371:3,368:3:104:368:13124:-1171.27,-101.979,0	0/1:221:124,97:124:4440:97:3453:-244.455,0,-333.243	0/1:43:20,23:20:720:23:820:-61.1782,0,-52.1845	1/1:219:0,219:0:0:219:7856:-707.065,-65.9256,0	0/1:156:77,79:77:2760:79:2820:-207.079,0,-201.681	1/1:135:0,135:0:0:135:4833:-435.123,-40.6391,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:27:13,14:13:468:14:504:-37.5703,0,-34.3318	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:11:0,11:0:0:11:388:-35.2574,-3.31133,0	0/1:17:7,10:7:252:10:360:-27.6268,0,-17.9114	1/1:217:0,217:0:0:217:7743:-696.902,-65.3235,0	0/1:261:112,149:112:3974:149:5296:-398.211,0,-279.281	0/1:114:47,67:47:1688:67:2385:-180.588,0,-117.89	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:165:85,80:85:3017:80:2845:-206.617,0,-222.091	0/1:57:30,27:30:1076:27:963:-69.8272,0,-79.9941	0/1:125:70,55:70:2508:55:1976:-140.486,0,-188.343	0/1:91:37,54:37:1332:54:1922:-145.862,0,-92.7887	1/1:70:0,70:0:0:70:2490:-224.353,-21.0721,0	0/1:81:49,32:49:1752:32:1148:-79.2464,0,-133.581	1/1:179:0,179:0:0:179:6386:-574.83,-53.8844,0	1/1:156:0,156:0:0:156:5579:-502.233,-46.9607,0	0/1:138:65,73:65:2332:73:2620:-194.505,0,-168.597	1/1:201:0,201:0:0:201:7216:-649.491,-60.507,0	0/1:200:115,85:115:4112:85:3037:-213.353,0,-310.059	0/1:13:6,7:6:208:7:252:-19.1156,0,-15.1457	0/1:193:106,87:106:3777:87:3103:-221.399,0,-282.03	1/1:55:0,55:0:0:55:1953:-176.044,-16.5567,0	1/1:26:0,26:0:0:26:928:-83.8383,-7.82678,0	1/1:149:2,147:2:72:147:5264:-466.869,-38.0167,0	0/1:41:32,9:32:1137:9:324:-17.1636,0,-90.2947	1/1:12:0,12:0:0:12:428:-38.8588,-3.61236,0	0/1:23:13,10:13:460:10:360:-25.8206,0,-34.8117	0/1:128:53,75:53:1881:75:2667:-201.586,0,-131.035	1/1:153:0,152:0:0:152:5414:-487.032,-45.7566,0	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.8309	0/1:167:92,75:92:3280:75:2680:-191.173,0,-245.149	1/1:236:0,236:0:0:236:8411:-756.994,-71.0431,0	0/1:112:51,61:51:1828:61:2184:-163.111,0,-131.086	1/1:91:0,91:0:0:91:3233:-291.192,-27.3937,0	0/1:172:87,85:87:3090:85:3044:-222.413,0,-226.549	1/1:312:2,310:2:72:310:11056:-988.099,-87.0846,0	1/1:66:1,65:1:36:65:2311:-204.652,-16.2697,0	1/1:144:0,144:0:0:144:5144:-463.102,-43.3483,0	1/1:111:0,111:0:0:111:3975:-357.94,-33.4143,0	1/1:42:0,42:0:0:42:1500:-135.295,-12.6433,0	1/1:192:0,192:0:0:192:6852:-616.752,-57.7978,0	1/1:80:0,80:0:0:80:2859:-257.547,-24.0824,0	1/1:224:1,223:1:32:223:7980:-715.023,-64.2314,0	1/1:191:0,191:0:0:191:6827:-614.501,-57.4967,0	1/1:156:0,156:0:0:156:5544:-499.087,-46.9607,0	1/1:133:1,132:1:36:132:4704:-419.924,-36.4387,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	1/1:145:4,141:4:144:141:5048:-441.152,-30.3357,0	0/1:113:54,59:54:1928:59:2120:-157.052,0,-139.78	0/1:221:133,88:133:4760:88:3148:-217.018,0,-362.03	1/1:123:0,123:0:0:123:4395:-395.723,-37.0267,0	1/1:84:0,84:0:0:84:3012:-271.311,-25.2865,0	1/1:115:0,115:0:0:115:4104:-369.546,-34.6185,0	0/1:150:70,80:70:2508:80:2867:-213.112,0,-180.818	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	0/1:113:48,65:48:1724:65:2327:-175.673,0,-121.429	0/1:103:47,56:47:1684:56:1991:-148.457,0,-120.841	0/1:97:48,49:48:1720:49:1748:-128.404,0,-125.886	0/1:168:76,92:76:2724:92:3290:-245.741,0,-194.83	0/1:98:54,44:54:1917:44:1563:-111.46,0,-143.304	1/1:83:0,82:0:0:82:2906:-261.416,-24.6845,0	1/1:129:1,128:1:36:128:4543:-405.439,-35.2346,0
chr10	4896957	.	A	C	16612.1	PASS	AB=0.476453;ABP=16.0999;AC=44;AF=0.234043;AN=188;AO=1299;CIGAR=1X;DP=5620;DPB=5620;DPRA=1.09341;EPP=2815.07;EPPR=9333.88;GTI=0;LEN=1;MEANALT=1.0625;MQM=34.2179;MQMR=59.1615;NS=94;NUMALT=1;ODDS=1.07795;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46444;QR=154302;RO=4317;RPL=1;RPP=2815.07;RPPR=9325.21;RPR=1298;RUN=1;SAF=0;SAP=2823.75;SAR=1299;SRF=1;SRP=9368.57;SRR=4316;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:17,28:17:608:28:1004:-67.4364,0,-41.5048	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.343	0/0:78:78,0:78:2767:0:0:0,-23.4803,-249.169	0/1:116:53,63:53:1889:63:2256:-142.952,0,-135.3	0/1:55:32,23:32:1143:23:816:-49.635,0,-86.5547	0/1:22:7,15:7:240:15:540:-36.696,0,-15.2981	0/1:51:28,23:28:1008:23:828:-51.003,0,-75.582	0/1:95:48,47:48:1696:47:1690:-107.326,0,-124.32	0/1:62:35,27:35:1256:27:960:-59.917,0,-94.6805	0/1:53:28,25:28:1008:25:900:-56.1386,0,-75.0249	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.881	0/1:74:39,35:39:1400:35:1232:-77.5875,0,-103.987	0/0:75:75,0:75:2640:0:0:0,-22.5772,-237.621	0/0:36:36,0:36:1278:0:0:0,-10.8371,-115.259	0/0:42:41,1:41:1464:1:36:0,-9.74049,-128.993	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1056	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8654	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6246	0/1:25:12,13:12:432:13:468:-29.4545,0,-31.6954	0/1:131:66,65:66:2356:65:2336:-145.713,0,-172.798	0/1:92:52,40:52:1864:40:1440:-88.6663,0,-140.286	0/0:68:68,0:68:2436:0:0:0,-20.47,-219.125	0/0:65:65,0:65:2323:0:0:0,-19.5669,-209.2	0/0:64:64,0:64:2300:0:0:0,-19.2659,-206.943	0/1:63:44,19:44:1560:19:680:-35.6792,0,-118.587	0/0:156:156,0:156:5556:0:0:0,-46.9607,-499.971	0/1:112:73,38:73:2624:38:1360:-77.1708,0,-202.568	0/1:9:7,2:7:252:2:72:-3.45843,0,-20.297	0/0:143:142,0:142:5069:0:0:0,-42.7463,-455.832	0/1:76:40,36:40:1421:36:1296:-81.4168,0,-105.156	0/0:56:56,0:56:1989:0:0:0,-16.8577,-179.063	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:25:10,15:10:360:15:527:-35.8673,0,-25.2186	0/0:10:10,0:10:351:0:0:0,-3.0103,-31.9267	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3757	0/1:24:13,11:13:464:11:396:-24.4056,0,-34.8527	0/0:140:140,0:140:4965:0:0:0,-42.1442,-446.716	0/1:98:49,49:49:1756:49:1764:-112.996,0,-128.711	0/1:27:13,13:13:464:13:448:-28.6314,0,-33.9129	0/1:6:2,4:2:72:4:144:-10.2046,0,-5.02195	0/1:67:35,32:35:1256:32:1148:-72.5176,0,-92.7477	0/1:20:13,7:13:464:7:248:-14.5514,0,-36.0769	0/1:168:88,79:88:3149:79:2811:-177.425,0,-232.858	0/1:25:17,8:17:612:8:288:-15.7439,0,-47.028	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.499	0/1:98:43,55:43:1544:55:1957:-126.219,0,-109.087	0/0:85:85,0:85:3043:0:0:0,-25.5875,-274.073	0/0:114:114,0:114:4083:0:0:0,-34.3174,-367.023	0/1:61:35,26:35:1252:26:936:-56.5463,0,-94.5938	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.333	0/1:127:58,69:58:2065:69:2480:-156.645,0,-147.775	0/1:7:2,5:2:72:5:180:-12.5559,0,-4.72951	0/1:94:55,39:55:1980:39:1385:-84.0638,0,-149.901	0/0:28:28,0:28:1008:0:0:0,-8.42884,-90.9724	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4419	0/0:87:86,1:86:3084:1:36:0,-22.6162,-274.056	0/1:40:23,17:23:824:17:608:-36.8671,0,-62.3521	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5418	0/1:58:32,26:32:1152:26:932:-56.8702,0,-86.5295	0/0:103:102,1:102:3668:1:36:0,-27.8185,-326.968	0/1:8:2,6:2:72:6:216:-14.2907,0,-4.33769	0/1:100:48,52:48:1720:52:1872:-117.517,0,-124.951	0/0:179:179,0:179:6415:0:0:0,-53.8844,-577.249	0/1:43:20,23:20:711:23:824:-52.6251,0,-51.3714	0/0:41:41,0:41:1455:0:0:0,-12.3422,-130.726	0/1:80:38,42:38:1364:42:1496:-96.0068,0,-98.5792	0/0:113:113,0:113:4041:0:0:0,-34.0164,-363.617	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.4933	0/0:33:33,0:33:1173:0:0:0,-9.93399,-105.856	0/0:41:41,0:41:1467:0:0:0,-12.3422,-132.247	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:122:122,0:122:4370:0:0:0,-36.7257,-393.371	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.363	0/0:106:106,0:106:3773:0:0:0,-31.9092,-339.442	0/0:77:77,0:77:2760:0:0:0,-23.1793,-248.269	0/0:50:50,0:50:1762:0:0:0,-15.0515,-158.77	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.436	0/0:19:19,0:19:667:0:0:0,-5.71957,-60.3261	0/0:45:44,1:44:1584:1:36:0,-10.3002,-139.558	0/1:61:27,34:27:968:34:1216:-79.2212,0,-69.0565	0/1:90:56,34:56:2003:34:1220:-70.6925,0,-153.408	0/0:50:50,0:50:1788:0:0:0,-15.0515,-161.191	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.362	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:72:42,30:42:1482:30:1080:-64.4531,0,-111.978	0/0:17:17,0:17:597:0:0:0,-5.11751,-54.0271	0/1:56:28,28:28:999:28:989:-62.7783,0,-73.3482	0/1:59:25,34:25:885:34:1215:-81.2629,0,-62.1848	0/1:25:12,13:12:432:13:464:-30.577,0,-31.5142	0/1:60:33,27:33:1184:27:963:-59.7191,0,-88.7617	0/1:38:20,18:20:720:18:615:-36.5612,0,-53.6189	0/0:69:69,0:69:2464:0:0:0,-20.7711,-221.019	0/0:66:66,0:66:2363:0:0:0,-19.868,-212.607
chr10	4896970	.	C	T	17170.7	PASS	AB=0.482169;ABP=10.5994;AC=44;AF=0.234043;AN=188;AO=1329;CIGAR=1X;DP=5648;DPB=5648;DPRA=1.12506;EPP=2888.9;EPPR=9370.74;GTI=0;LEN=1;MEANALT=1.02083;MQM=34.2302;MQMR=59.2031;NS=94;NUMALT=1;ODDS=1.75217;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47626;QR=154186;RO=4314;RPL=1329;RPP=2888.9;RPPR=9370.74;RPR=0;RUN=1;SAF=0;SAP=2888.9;SAR=1329;SRF=0;SRP=9370.74;SRR=4314;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:17,28:17:608:28:1004:-67.3957,0,-41.5048	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.226	0/0:77:75,0:75:2660:0:0:0,-22.5772,-239.225	0/1:117:52,65:52:1860:65:2324:-148.248,0,-132.398	0/1:56:32,24:32:1148:24:849:-52.4317,0,-86.7048	0/1:22:7,15:7:252:15:540:-36.696,0,-16.3924	0/1:52:28,24:28:1004:24:860:-53.39,0,-74.9205	0/1:98:50,48:50:1776:48:1728:-109.355,0,-130.62	0/1:63:35,28:35:1252:28:1008:-63.1,0,-94.0178	0/1:55:30,25:30:1072:25:900:-55.5366,0,-80.179	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.119	0/1:78:41,37:41:1444:37:1328:-83.4321,0,-106.732	0/0:75:75,0:75:2688:0:0:0,-22.5772,-241.921	0/0:37:37,0:37:1320:0:0:0,-11.1381,-119.039	0/0:44:43,1:43:1540:1:36:0,-10.3426,-135.808	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.466	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8654	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4	0/1:25:12,13:12:432:13:464:-29.2326,0,-31.6954	0/1:132:65,67:65:2332:67:2397:-150.673,0,-170.365	0/1:94:52,42:52:1856:42:1512:-93.9074,0,-138.986	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.436	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.274	0/0:62:62,0:62:2205:0:0:0,-18.6639,-198.396	0/1:61:42,19:42:1500:19:684:-36.422,0,-113.795	0/0:159:159,0:159:5661:0:0:0,-47.8638,-509.386	0/1:112:73,39:73:2598:39:1400:-80.3486,0,-200.291	0/1:9:7,2:7:252:2:72:-3.45843,0,-20.297	0/0:141:141,0:141:5013:0:0:0,-42.4452,-451.125	0/1:75:39,36:39:1383:36:1296:-81.7178,0,-102.049	0/0:59:59,0:59:2115:0:0:0,-17.7608,-190.219	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:25:10,15:10:360:15:521:-35.3658,0,-25.2186	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:10:10,0:10:345:0:0:0,-3.0103,-31.367	0/1:26:13,13:13:464:13:438:-27.5366,0,-34.2507	0/0:141:141,0:141:5064:0:0:0,-42.4452,-455.611	0/1:99:49,50:49:1752:50:1800:-115.617,0,-128.095	0/1:29:15,14:15:540:14:504:-31.6189,0,-40.189	0/1:5:1,4:1:36:4:144:-10.5056,0,-2.09312	0/1:67:35,32:35:1248:32:1152:-72.7185,0,-92.4559	0/1:20:13,7:13:464:7:252:-14.7548,0,-36.0769	0/1:169:89,80:89:3177:80:2876:-181.781,0,-235.122	0/1:25:16,9:16:576:9:324:-18.6128,0,-43.8456	0/0:36:36,0:36:1288:0:0:0,-10.8371,-116.155	0/1:98:42,56:42:1508:56:2000:-129.727,0,-106.393	0/0:85:85,0:85:3031:0:0:0,-25.5875,-272.995	0/0:116:116,0:116:4143:0:0:0,-34.9195,-372.417	0/1:62:35,27:35:1252:27:972:-59.1142,0,-94.2928	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.613	0/1:128:57,71:57:1994:71:2547:-162.056,0,-141.048	0/1:7:2,5:2:72:5:180:-12.5559,0,-4.72951	0/1:95:55,40:55:1951:40:1440:-87.8535,0,-147.094	0/0:28:27,0:27:949:0:0:0,-8.12781,-85.3308	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2035	0/0:86:86,0:86:3092:0:0:0,-25.8886,-278.326	0/1:40:23,17:23:815:17:612:-37.0482,0,-61.5395	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5418	0/1:58:31,27:31:1104:27:964:-59.7852,0,-82.21	0/0:101:100,1:100:3592:1:36:0,-27.2164,-320.123	0/1:9:3,6:3:108:6:216:-13.9896,0,-7.2767	0/1:105:53,52:53:1892:52:1845:-114.451,0,-138.935	0/0:181:181,0:181:6484:0:0:0,-54.4864,-583.475	0/1:45:22,23:22:783:23:828:-52.2242,0,-57.2429	0/0:41:41,0:41:1435:0:0:0,-12.3422,-129.414	0/1:81:37,44:37:1328:44:1580:-101.985,0,-95.0397	0/0:112:111,1:111:3988:1:36:0,-30.1485,-355.3	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.4933	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.971	0/0:41:41,0:41:1464:0:0:0,-12.3422,-131.978	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:122:122,0:122:4372:0:0:0,-36.7257,-393.57	0/0:62:61,0:61:2175:0:0:0,-18.3628,-195.582	0/0:106:106,0:106:3808:0:0:0,-31.9092,-342.514	0/0:75:75,0:75:2688:0:0:0,-22.5772,-241.792	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.442	0/0:64:64,0:64:2253:0:0:0,-19.2659,-202.986	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:45:44,1:44:1580:1:36:0,-10.3002,-139.198	0/1:59:24,34:24:856:34:1220:-79.9883,0,-59.5434	0/1:88:55,33:55:1976:33:1188:-68.5534,0,-151.582	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.24	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/1:74:41,33:41:1476:33:1184:-72.2772,0,-110.832	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.0058	0/1:56:28,28:28:1000:28:1008:-63.6251,0,-73.4487	0/1:59:24,35:24:860:35:1260:-84.7352,0,-59.9401	0/1:24:12,12:12:417:12:417:-27.102,0,-30.4543	0/1:61:33,28:33:1184:28:1008:-62.7803,0,-88.4606	0/1:40:22,18:22:788:18:636:-37.2979,0,-59.1498	0/0:72:72,0:72:2572:0:0:0,-21.6742,-230.402	0/0:68:68,0:68:2448:0:0:0,-20.47,-220.254
chr10	5295104	.	A	G	40992.4	PASS	AB=0.488764;ABP=8.67077;AC=41;AF=0.218085;AN=188;AO=2606;CIGAR=1X;DP=16761;DPB=16761;DPRA=0.940207;EPP=5661.87;EPPR=30731.5;GTI=2;LEN=1;MEANALT=1.07143;MQM=59.9777;MQMR=59.9927;NS=94;NUMALT=1;ODDS=3.11555;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=92660;QR=506131;RO=14151;RPL=0;RPP=5661.87;RPPR=30731.5;RPR=2606;RUN=1;SAF=0;SAP=5661.87;SAR=2606;SRF=0;SRP=30731.5;SRR=14151;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:32:17,15:17:612:15:540:-39.299,0,-45.7805	0/0:164:164,0:164:5867:0:0:0,-49.3689,-528.141	0/0:132:132,0:132:4710:0:0:0,-39.736,-424.06	0/1:171:85,86:85:3036:86:3024:-220.911,0,-221.995	0/1:72:45,27:45:1597:27:959:-64.9512,0,-122.344	0/1:70:34,36:34:1212:36:1288:-95.1515,0,-88.3142	0/1:138:73,65:73:2602:65:2332:-168.597,0,-192.885	0/1:205:104,101:104:3723:101:3574:-260.156,0,-273.559	0/1:125:49,76:49:1743:76:2697:-205.342,0,-119.525	0/1:107:43,64:43:1536:64:2270:-172.336,0,-106.311	0/0:138:138,0:138:4912:0:0:0,-41.5421,-442.23	0/1:66:27,39:27:972:39:1400:-106.431,0,-67.9299	0/0:41:41,0:41:1443:0:0:0,-12.3422,-130.165	0/0:48:48,0:48:1699:0:0:0,-14.4494,-153.195	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.467	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:114:78,36:78:2792:36:1249:-78.3889,0,-217.203	0/1:200:92,107:92:3293:107:3816:-283.372,0,-236.323	0/1:165:72,93:72:2563:93:3290:-246.649,0,-181.25	0/0:152:152,0:152:5436:0:0:0,-45.7566,-489.37	0/0:52:52,0:52:1860:0:0:0,-15.6536,-167.68	0/0:112:110,1:110:3931:1:36:0,-30.1759,-350.384	0/1:89:55,34:55:1972:34:1224:-83.6754,0,-150.963	0/0:388:388,0:388:13860:0:0:0,-116.8,-1247.18	0/1:226:99,127:99:3552:127:4507:-337.764,0,-251.855	0/1:16:5,11:5:180:11:387:-30.3495,0,-11.7356	0/0:262:262,0:262:9376:0:0:0,-78.8699,-843.801	0/1:202:110,92:110:3933:92:3281:-234.701,0,-293.353	0/0:117:117,0:117:4200:0:0:0,-35.2205,-378.18	0/0:732:732,0:732:26250:0:0:0,-220.354,-2361.74	0/0:484:467,17:467:16727:17:578:0,-93.3611,-1452.74	0/0:573:573,0:573:20523:0:0:0,-172.49,-1846.56	0/0:785:785,0:785:28067:0:0:0,-236.309,-2525.21	0/0:713:697,16:697:24824:16:568:0,-163.183,-2182.03	0/0:125:125,0:125:4460:0:0:0,-37.6287,-401.569	0/1:301:132,168:132:4723:168:5978:-447.458,0,-334.56	0/1:154:124,30:124:4398:30:1080:-51.1546,0,-349.635	0/0:517:515,2:515:18428:2:59:0,-150.028,-1652.01	0/1:172:94,78:94:3355:78:2780:-198.662,0,-250.39	0/1:71:57,14:57:2040:14:504:-24.325,0,-162.499	0/1:201:103,98:103:3663:98:3471:-252.093,0,-269.366	0/1:27:11,16:11:396:16:576:-44.0472,0,-27.8549	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/1:117:64,53:64:2292:53:1895:-135.607,0,-170.951	0/0:126:126,0:126:4493:0:0:0,-37.9298,-404.539	0/0:235:235,0:235:8404:0:0:0,-70.742,-756.363	0/1:159:104,55:104:3724:55:1965:-129.259,0,-287.497	0/1:95:51,44:51:1828:44:1571:-113.083,0,-136.203	0/1:222:111,111:111:3961:111:3949:-288.766,0,-289.852	0/0:576:569,6:569:20359:6:212:0,-154.026,-1812.38	0/1:278:93,185:93:3340:185:6516:-502.841,0,-217.13	0/0:96:96,0:96:3439:0:0:0,-28.8989,-309.722	0/0:546:546,0:546:19569:0:0:0,-164.362,-1760.74	0/0:117:116,1:116:4155:1:36:0,-31.6222,-370.534	0/1:37:17,20:17:604:20:708:-52.9075,0,-43.5525	0/0:591:591,0:591:21194:0:0:0,-177.909,-1906.92	0/0:619:600,19:600:21467:19:684:0,-124.447,-1869.59	0/1:105:58,47:58:2060:47:1670:-118.977,0,-154.061	0/0:90:90,0:90:3213:0:0:0,-27.0927,-289.391	0/0:256:246,10:246:8848:10:360:0,-44.3194,-763.555	0/1:128:38,90:38:1360:90:3178:-247.712,0,-84.1688	0/0:251:250,1:250:8959:1:36:0,-71.9603,-802.682	0/1:72:32,40:32:1144:40:1425:-106.871,0,-81.5954	0/0:59:57,2:57:2044:2:72:0,-10.924,-177.395	0/1:158:95,63:95:3400:63:2252:-155.38,0,-258.652	0/0:230:228,2:228:8162:2:72:0,-62.4002,-727.756	0/0:93:91,2:91:3251:2:72:0,-21.1591,-285.974	0/0:138:138,0:138:4951:0:0:0,-41.5421,-445.738	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/0:323:322,1:322:11513:1:36:0,-93.6344,-1032.44	0/0:174:174,0:174:6212:0:0:0,-52.3792,-559.176	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/0:192:192,0:192:6863:0:0:0,-57.7978,-617.737	0/0:119:119,0:119:4231:0:0:0,-35.8226,-380.97	0/0:133:132,1:132:4707:1:36:0,-36.4387,-420.19	0/1:110:37,73:37:1324:73:2604:-201.493,0,-86.3488	0/0:379:379,0:379:13568:0:0:0,-114.09,-1220.9	0/0:90:88,2:88:3142:2:72:0,-20.256,-276.168	0/1:105:54,51:54:1932:51:1828:-133.19,0,-142.548	0/1:218:107,111:107:3840:111:3976:-292.406,0,-280.171	0/0:75:75,0:75:2679:0:0:0,-22.5772,-241.355	0/0:33:33,0:33:1173:0:0:0,-9.93399,-105.876	0/0:48:48,0:48:1691:0:0:0,-14.4494,-152.476	0/1:61:27,34:27:960:34:1216:-91.3837,0,-68.3534	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/1:54:26,28:26:936:28:1008:-74.7807,0,-68.3038	0/1:41:15,26:15:527:26:928:-71.496,0,-35.418	0/1:147:127,20:127:4548:20:708:-19.7942,0,-365.235	0/1:85:46,39:46:1656:39:1391:-99.9013,0,-123.741	0/1:46:26,20:26:928:20:716:-50.9203,0,-69.9909	0/0:97:97,0:97:3463:0:0:0,-29.1999,-311.88	0/0:62:62,0:62:2207:0:0:0,-18.6639,-198.895
chr10	5496918	.	CTAA	GTAG,GTAA	213148	PASS	AB=0.516416,0.481267;ABP=15.13,18.7935;AC=141,47;AF=0.75,0.25;AN=188;AO=7518,2501;CIGAR=1X2M1X,1X3M;DP=10044;DPB=10043.8;DPRA=0,1.23884;EPP=16328.1,5425.18;EPPR=0;GTI=1;LEN=4,1;MEANALT=1.79787,2.23077;MQM=59.9134,59.9768;MQMR=0;NS=94;NUMALT=2;ODDS=0.103213;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=266359,89123;QR=0;RO=0;RPL=0,1;RPP=16328.1,5425.18;RPPR=0;RPR=7518,2500;RUN=1,1;SAF=7518,2501;SAP=16328.1,5433.86;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:75:0,50,25:0:0:50,25:1742,870:-212.728,-71.0863,-56.0348,-141.99,0,-134.464	1/1:78:0,78,0:0:0:78,0:2758,0:-248.462,-23.4803,0,-248.462,-23.4803,-248.462	1/1:150:0,150,0:0:0:150,0:5300,0:-477.1,-45.1545,0,-477.1,-45.1545,-477.1	1/2:196:0,96,100:0:0:96,100:3358,3554:-563.15,-289.964,-261.065,-273.538,0,-243.435	1/2:86:0,46,40:0:0:46,40:1636,1436:-250.816,-117.493,-103.646,-133.68,0,-121.639	1/2:83:0,41,42:0:0:41,42:1458,1512:-242.547,-123.731,-111.389,-119.173,0,-106.53	1/2:124:0,42,82:0:0:42,82:1483,2937:-360.643,-239.878,-227.234,-121.12,0,-96.4358	1/2:174:0,96,77:0:0:96,77:3375,2730:-496.8,-222.402,-193.503,-274.391,0,-251.212	1/2:148:0,71,77:0:0:71,77:2507,2754:-429.077,-224.923,-203.549,-204.509,0,-181.33	1/2:117:0,82,35:0:0:82,35:2892,1241:-336.895,-101.456,-76.772,-235.793,0,-225.257	1/1:99:0,99,0:0:0:99,0:3509,0:-316.022,-29.802,0,-316.022,-29.802,-316.022	1/2:105:0,56,47:0:0:56,47:1950,1665:-294.253,-135.689,-118.831,-158.617,0,-144.469	1/1:76:0,76,0:0:0:76,0:2727,0:-245.673,-22.8783,0,-245.673,-22.8783,-245.673	1/1:128:0,128,0:0:0:128,0:4558,0:-410.378,-38.5318,0,-410.378,-38.5318,-410.378	1/1:60:0,59,0:0:0:59,0:2088,0:-187.829,-17.7608,0,-187.829,-17.7608,-187.829	1/1:73:0,73,0:0:0:73,0:2614,0:-235.479,-21.9752,0,-235.479,-21.9752,-235.479	1/1:51:0,50,0:0:0:50,0:1767,0:-159.02,-15.0515,0,-159.02,-15.0515,-159.02	1/1:40:0,40,0:0:0:40,0:1431,0:-129.088,-12.0412,0,-129.088,-12.0412,-129.088	1/2:53:0,21,32:0:0:21,32:755,1126:-153.608,-92.0149,-85.6933,-61.9489,0,-52.316	1/2:196:0,94,102:0:0:94,102:3332,3630:-567.625,-296.198,-267.901,-271.782,0,-241.077	1/2:167:0,103,64:0:0:103,64:3671,2284:-485.789,-186.556,-155.55,-299.589,0,-280.323	1/1:131:0,131,0:0:0:131,0:4627,0:-416.595,-39.4349,0,-416.595,-39.4349,-416.595	1/1:95:0,94,0:0:0:94,0:3344,0:-300.819,-28.2968,0,-300.819,-28.2968,-300.819	1/1:67:0,67,0:0:0:67,0:2362,0:-212.832,-20.169,0,-212.832,-20.169,-212.832	1/2:88:0,52,35:0:0:52,35:1838,1248:-251.457,-101.77,-86.116,-149.732,0,-139.195	1/1:289:0,289,0:0:0:289,0:10253,0:-922.654,-86.9977,0,-922.654,-86.9977,-922.654	1/2:320:0,180,140:0:0:180,140:6396,4965:-926.003,-404.816,-350.63,-521.542,0,-479.398	1/2:16:0,5,11:0:0:5,11:180,396:-47.3585,-32.6714,-31.1663,-15.0469,0,-11.7356	1/1:300:0,298,1:0:0:298,1:10510,36:-945.503,-89.7069,0,-942.566,-86.7346,-942.265	1/2:146:0,79,65:0:0:79,65:2821,2305:-417.784,-187.793,-164.011,-229.997,0,-210.43	1/1:119:0,119,0:0:0:119,0:4231,0:-380.972,-35.8226,0,-380.972,-35.8226,-380.972	1/1:18:0,18,0:0:0:18,0:635,0:-57.4771,-5.41854,0,-57.4771,-5.41854,-57.4771	1/2:33:0,23,10:0:0:23,10:796,360:-94.4102,-29.734,-22.8103,-65.0318,0,-62.0215	1/1:8:0,8,0:0:0:8,0:277,0:-25.2655,-2.40824,0,-25.2655,-2.40824,-25.2655	1/1:16:0,16,0:0:0:16,0:567,0:-51.361,-4.81648,0,-51.361,-4.81648,-51.361	1/2:26:0,9,17:0:0:9,17:322,612:-76.5525,-50.2959,-47.5867,-26.6149,0,-21.4974	1/1:161:0,161,0:0:0:161,0:5671,0:-510.514,-48.4658,0,-510.514,-48.4658,-510.514	1/2:140:0,86,54:0:0:86,54:3025,1917:-402.764,-156.55,-130.661,-246.567,0,-230.312	1/2:68:0,37,31:0:0:37,31:1307,1108:-197.128,-90.6991,-79.561,-106.785,0,-97.4526	1/2:6:0,5,1:0:0:5,1:180,36:-17.9843,-3.29724,-1.79209,-15.0469,0,-14.7459	1/2:154:0,69,85:0:0:69,85:2447,3011:-444.995,-245.635,-224.864,-199.714,0,-174.127	1/2:43:0,29,14:0:0:29,14:1039,504:-126.219,-41.4837,-32.7538,-85.0945,0,-80.88	1/2:192:0,113,79:0:0:113,79:3997,2768:-551.129,-225.576,-191.56,-325.904,0,-302.123	1/2:52:0,31,21:0:0:31,21:1096,756:-151.306,-62.0456,-52.7137,-89.6174,0,-83.2958	1/1:46:0,46,0:0:0:46,0:1639,0:-147.798,-13.8474,0,-147.798,-13.8474,-147.798	1/2:260:0,121,139:0:0:121,139:4294,4981:-756.433,-406.593,-370.168,-350.197,0,-308.354	1/1:48:0,48,0:0:0:48,0:1712,0:-154.366,-14.4494,0,-154.366,-14.4494,-154.366	1/1:136:0,136,0:0:0:136,0:4826,0:-434.478,-40.9401,0,-434.478,-40.9401,-434.478	1/2:101:0,44,57:0:0:44,57:1559,1995:-289.664,-162.66,-149.415,-127.357,0,-110.198	1/2:107:0,54,53:0:0:54,53:1915,1892:-310.616,-154.602,-138.346,-156.37,0,-140.415	1/2:168:0,88,80:0:0:88,80:3092,2846:-483.728,-232.293,-205.802,-251.788,0,-227.706	1/2:23:0,10,13:0:0:10,13:360,464:-67.5596,-38.1841,-35.1738,-29.734,0,-25.8206	1/2:123:0,61,61:0:0:61,61:2177,2188:-355.939,-178.463,-160.1,-177.474,0,-159.111	1/1:102:0,101,0:0:0:101,0:3596,0:-323.486,-30.404,0,-323.486,-30.404,-323.486	1/1:16:0,16,0:0:0:16,0:569,0:-51.5421,-4.81648,0,-51.5421,-4.81648,-51.5421	1/1:179:0,179,0:0:0:179,0:6364,0:-572.854,-53.8844,0,-572.854,-53.8844,-572.854	1/2:25:0,17,8:0:0:17,8:5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chr10	5625202	.	T	C	190699	PASS	AB=0.540478;ABP=77.3719;AC=141;AF=0.75;AN=188;AO=8863;CIGAR=1X;DP=11286;DPB=11286;DPRA=0;EPP=18851.3;EPPR=5141.23;GTI=2;LEN=1;MEANALT=1.08511;MQM=59.9909;MQMR=60;NS=94;NUMALT=1;ODDS=0.216494;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316631;QR=84898;RO=2414;RPL=8817;RPP=18851.3;RPPR=5141.23;RPR=46;RUN=1;SAF=2;SAP=19231.4;SAR=8861;SRF=0;SRP=5244.94;SRR=2414;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:19,21:19:653:21:750:-55.7847,0,-47.0481	1/1:123:0,122:0:0:122:4371:-393.203,-36.7257,0	1/1:121:1,120:1:36:120:4265:-380.432,-32.8264,0	0/1:157:49,108:49:1744:108:3848:-299.254,0,-109.983	0/1:49:27,22:27:929:22:792:-56.8552,0,-69.1696	0/1:62:22,40:22:757:40:1425:-109.882,0,-49.7821	0/1:104:53,51:53:1889:51:1820:-132.774,0,-138.979	0/1:227:74,153:74:2568:153:5468:-423.912,0,-163.033	0/1:93:49,44:49:1709:44:1576:-114.136,0,-126.098	0/1:114:59,55:59:2104:55:1939:-140.148,0,-155.312	1/1:140:0,140:0:0:140:5022:-452.125,-42.1442,0	0/1:121:68,53:68:2394:53:1899:-134.763,0,-179.29	1/1:108:0,108:0:0:108:3865:-348.043,-32.5112,0	1/1:197:0,197:0:0:197:7079:-637.166,-59.3029,0	1/1:106:0,106:0:0:106:3791:-341.388,-31.9092,0	1/1:84:0,84:0:0:84:3016:-271.67,-25.2865,0	1/1:142:0,142:0:0:142:5098:-458.961,-42.7463,0	1/1:91:1,90:1:36:90:3232:-287.503,-23.7955,0	0/1:49:25,24:25:896:24:851:-62.159,0,-66.2099	0/1:95:40,55:40:1424:55:1957:-147.806,0,-99.8596	0/1:152:54,98:54:1897:98:3516:-270.893,0,-125.25	1/1:87:0,87:0:0:87:3114:-280.487,-26.1896,0	1/1:94:0,94:0:0:94:3361:-302.705,-28.2968,0	1/1:116:8,108:8:265:108:3868:-324.143,-10.7474,0	0/1:98:31,67:31:1104:67:2408:-187.475,0,-70.1697	1/1:413:0,412:0:0:412:14718:-1324.04,-124.024,0	0/1:200:84,116:84:2917:116:4102:-309.158,0,-202.564	0/1:52:19,33:19:665:33:1184:-91.2148,0,-44.5192	1/1:274:0,274:0:0:274:9785:-880.595,-82.4822,0	0/1:214:85,129:85:3033:129:4628:-352.262,0,-208.779	1/1:217:0,217:0:0:217:7707:-693.667,-65.3235,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	0/1:19:6,13:6:216:13:468:-36.7401,0,-14.0709	1/1:12:1,11:1:32:11:396:-32.7834,-0.413047,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:16:4,12:4:140:12:432:-34.4047,0,-8.1281	1/1:279:0,279:0:0:279:9988:-898.856,-83.9874,0	0/1:228:103,124:103:3621:124:4444:-331.437,0,-257.406	0/1:119:68,51:68:2398:51:1832:-129.338,0,-180.252	0/1:10:3,7:3:100:7:252:-20.0187,0,-6.32014	0/1:109:42,67:42:1488:67:2396:-183.085,0,-101.402	0/1:43:19,24:19:680:24:864:-65.1383,0,-48.5849	0/1:158:76,82:76:2708:82:2912:-214.752,0,-196.402	0/1:91:37,54:37:1316:54:1944:-147.842,0,-91.3481	1/1:91:0,91:0:0:91:3241:-291.912,-27.3937,0	0/1:91:38,53:38:1348:53:1877:-141.814,0,-94.2265	1/1:116:0,116:0:0:116:4156:-374.223,-34.9195,0	1/1:223:2,221:2:72:221:7898:-704.008,-60.293,0	0/1:96:55,41:55:1929:41:1464:-103.157,0,-144.986	0/1:147:59,88:59:2089:88:3149:-239.382,0,-144.027	0/1:133:64,69:64:2184:69:2480:-183.416,0,-156.785	0/1:17:7,10:7:218:10:341:-25.9003,0,-14.8069	0/1:149:72,77:72:2525:77:2743:-202.258,0,-182.649	1/1:71:0,71:0:0:71:2529:-227.86,-21.3731,0	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:133:1,132:1:36:132:4723:-421.63,-36.4387,0	0/1:30:15,15:15:532:15:536:-39.5439,0,-39.1822	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:19:11,8:11:392:8:288:-20.5478,0,-29.9005	0/1:68:51,17:51:1793:17:612:-34.9434,0,-141.18	1/1:211:0,211:0:0:211:7560:-680.436,-63.5173,0	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/1:174:67,106:67:2361:106:3780:-287.962,0,-160.31	1/1:248:0,246:0:0:246:8803:-792.016,-74.0534,0	0/1:86:42,44:42:1458:44:1580:-116.603,0,-105.622	1/1:79:0,79:0:0:79:2828:-254.759,-23.7814,0	0/1:162:80,82:80:2794:82:2914:-213.727,0,-202.934	1/1:76:1,75:1:36:75:2666:-236.585,-19.28,0	1/1:61:0,61:0:0:61:2180:-196.466,-18.3628,0	1/1:116:0,116:0:0:116:4135:-372.334,-34.9195,0	1/1:138:0,138:0:0:138:4938:-444.569,-41.5421,0	1/1:37:0,37:0:0:37:1332:-120.182,-11.1381,0	1/1:153:0,153:0:0:153:5462:-491.706,-46.0576,0	1/1:96:0,96:0:0:96:3415:-307.563,-28.8989,0	1/1:311:0,310:0:0:310:11032:-992.448,-93.3193,0	1/1:175:0,175:0:0:175:6249:-562.505,-52.6803,0	1/1:150:1,149:1:32:149:5309:-474.746,-41.9552,0	0/1:167:76,91:76:2681:91:3260:-243.349,0,-191.263	1/1:20:0,20:0:0:20:705:-63.773,-6.0206,0	1/1:129:0,129:0:0:129:4582:-412.545,-38.8329,0	0/1:86:35,51:35:1233:51:1824:-138.553,0,-85.3835	0/1:245:106,138:106:3706:138:4896:-367.131,0,-260.084	1/1:130:0,129:0:0:129:4629:-416.41,-38.8329,0	1/1:143:0,143:0:0:143:5089:-458.153,-43.0473,0	1/1:138:0,138:0:0:138:4916:-442.59,-41.5421,0	0/1:247:140,107:140:4965:107:3836:-271.079,0,-372.648	1/1:46:0,46:0:0:46:1627:-146.718,-13.8474,0	0/1:125:62,63:62:2154:63:2237:-163.964,0,-156.496	0/1:108:55,53:55:1933:53:1885:-137.415,0,-141.734	0/1:106:47,59:47:1649:59:2111:-158.35,0,-116.787	0/1:223:121,102:121:4242:102:3656:-262.114,0,-314.835	0/1:115:76,39:76:2709:39:1396:-91.3206,0,-209.434	1/1:134:0,134:0:0:134:4778:-430.176,-40.338,0	1/1:176:0,176:0:0:176:6305:-567.54,-52.9813,0
chr10	6328570	.	T	C	32231.5	PASS	AB=0.492304;ABP=5.04917;AC=46;AF=0.244681;AN=188;AO=1967;CIGAR=1X;DP=9055;DPB=9055;DPRA=0.959421;EPP=4230.98;EPPR=15268.7;GTI=0;LEN=1;MEANALT=1.03774;MQM=59.9309;MQMR=59.9763;NS=94;NUMALT=1;ODDS=1.60478;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69630;QR=253501;RO=7086;RPL=1962;RPP=4230.98;RPPR=15268.7;RPR=5;RUN=1;SAF=1967;SAP=4274.3;SAR=0;SRF=7086;SRP=15390.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:35:9,26:9:324:26:913:-71.948,0,-18.9698	0/0:85:85,0:85:3044:0:0:0,-25.5875,-274.19	0/0:176:176,0:176:6294:0:0:0,-52.9813,-566.553	0/1:134:84,50:84:3011:50:1771:-119.334,0,-230.882	0/1:29:10,19:10:360:19:684:-53.1605,0,-24.0144	0/1:17:11,6:11:392:6:216:-14.6721,0,-30.5025	0/1:57:27,30:27:959:30:1072:-79.6337,0,-69.4585	0/0:213:213,0:213:7616:0:0:0,-64.1194,-685.476	0/1:82:34,48:34:1216:48:1702:-128.779,0,-85.0621	0/1:103:50,53:50:1788:53:1880:-138.47,0,-130.197	0/0:99:99,0:99:3517:0:0:0,-29.802,-316.738	0/1:129:58,71:58:2084:71:2516:-187.85,0,-148.997	0/0:91:91,0:91:3264:0:0:0,-27.3937,-293.98	0/0:108:107,1:107:3848:1:36:0,-28.913,-342.916	0/0:68:68,0:68:2429:0:0:0,-20.47,-218.856	0/0:78:78,0:78:2763:0:0:0,-23.4803,-248.91	0/0:61:61,0:61:2172:0:0:0,-18.3628,-195.744	0/0:53:53,0:53:1895:0:0:0,-15.9546,-170.827	0/1:24:12,12:12:432:12:428:-31.6341,0,-31.9965	0/1:183:79,104:79:2823:104:3710:-279.013,0,-199.22	0/1:178:98,80:98:3503:80:2817:-200.186,0,-261.897	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.855	0/0:81:81,0:81:2904:0:0:0,-24.3834,-261.595	0/0:82:76,6:76:2736:6:216:0,-4.89395,-226.691	0/1:74:24,50:24:856:50:1770:-137.297,0,-55.0849	0/0:242:240,2:240:8619:2:72:0,-66.0125,-768.858	0/1:259:124,135:124:4435:135:4759:-350.503,0,-320.864	0/1:37:22,15:22:779:15:540:-37.7984,0,-59.294	0/0:281:281,0:281:10078:0:0:0,-84.5894,-906.95	0/1:151:80,71:80:2872:71:2523:-181.86,0,-213.261	0/0:94:94,0:94:3342:0:0:0,-28.2968,-300.998	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.6043	0/0:15:15,0:15:531:0:0:0,-4.51545,-48.1219	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/0:197:197,0:197:7039:0:0:0,-59.3029,-633.57	0/1:85:52,33:52:1864:33:1169:-79.9277,0,-142.452	0/1:49:27,22:27:963:22:783:-56.0425,0,-72.2355	0/1:5:1,4:1:36:4:136:-11.0704,0,-2.09312	0/0:62:60,2:60:2144:2:68:0,-12.2062,-186.77	0/1:30:14,16:14:504:16:576:-43.1441,0,-36.6672	0/1:93:51,42:51:1812:42:1490:-106.398,0,-135.366	0/1:62:32,30:32:1148:30:1043:-75.5128,0,-84.966	0/0:79:79,0:79:2819:0:0:0,-23.7814,-253.949	0/1:85:42,43:42:1508:43:1533:-112.674,0,-110.427	0/0:127:125,1:125:4462:1:36:0,-34.6913,-398.141	0/0:210:206,3:206:7358:3:108:0,-53.0875,-652.22	0/1:77:39,38:39:1392:38:1336:-97.3486,0,-102.4	0/1:181:83,98:83:2976:98:3473:-258.296,0,-213.586	0/1:57:34,23:34:1208:23:807:-55.7905,0,-91.8674	0/1:5:1,4:1:32:4:140:-11.4394,0,-1.69416	0/1:115:65,50:65:2340:50:1790:-126.764,0,-176.24	0/0:123:123,0:123:4388:0:0:0,-37.0267,-395.092	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7335	0/0:135:135,0:135:4836:0:0:0,-40.639,-435.394	0/1:36:13,23:13:449:23:820:-63.2854,0,-29.9004	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0163	0/1:20:13,7:13:468:7:246:-16.431,0,-36.439	0/1:76:38,38:38:1355:38:1347:-98.6512,0,-99.3714	0/0:123:123,0:123:4397:0:0:0,-37.0267,-395.902	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.03054	0/1:248:126,122:126:4520:122:4323:-314.591,0,-332.311	0/0:168:168,0:168:6010:0:0:0,-50.573,-541.004	0/1:92:69,23:69:2471:23:820:-46.4278,0,-194.948	0/0:66:66,0:66:2359:0:0:0,-19.868,-212.568	0/1:121:63,58:63:2244:58:2062:-149.427,0,-165.799	0/0:126:126,0:126:4504:0:0:0,-37.9298,-405.526	0/0:65:65,0:65:2322:0:0:0,-19.5669,-209.234	0/1:29:17,12:17:608:12:419:-29.3128,0,-46.3222	0/0:44:44,0:44:1558:0:0:0,-13.2453,-140.51	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:76:76,0:76:2714:0:0:0,-22.8783,-244.503	0/0:128:128,0:128:4579:0:0:0,-38.5318,-412.275	0/0:240:240,0:240:8611:0:0:0,-72.2472,-774.974	0/0:182:182,0:182:6514:0:0:0,-54.7875,-586.343	0/1:134:66,68:66:2355:68:2416:-177.355,0,-171.862	0/1:130:62,68:62:2224:68:2432:-180.002,0,-161.29	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/0:124:124,0:124:4429:0:0:0,-37.3277,-398.781	0/1:122:66,56:66:2342:56:1968:-140.666,0,-174.313	0/0:254:254,0:254:9106:0:0:0,-76.4616,-819.482	0/0:72:72,0:72:2557:0:0:0,-21.6742,-230.379	0/0:94:94,0:94:3371:0:0:0,-28.2968,-303.605	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.759	0/1:106:57,49:57:2052:49:1718:-122.992,0,-153.042	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/1:78:37,41:37:1320:41:1408:-103.53,0,-95.6216	0/1:92:48,44:48:1715:44:1566:-113.467,0,-126.94	0/1:68:34,34:34:1205:34:1207:-88.4652,0,-88.2839	0/1:138:81,57:81:2879:57:1994:-137.696,0,-217.803	0/1:113:47,66:47:1688:66:2303:-173.511,0,-118.19	0/0:219:218,1:218:7816:1:36:0,-62.3273,-699.778	0/0:132:132,0:132:4744:0:0:0,-39.736,-427.116
chr10	6340383	.	AAGG	GAGA,AAGA	154539	PASS	AB=0.463654,0.532417;ABP=43.8929,35.5312;AC=141,47;AF=0.75,0.25;AN=188;AO=5292,1907;CIGAR=1X2M1X,3M1X;DP=7226;DPB=7225.75;DPRA=0,1.04015;EPP=11373.2,4135.33;EPPR=9.52472;GTI=1;LEN=4,1;MEANALT=1.80851,2.24528;MQM=59.9747,59.9932;MQMR=60;NS=94;NUMALT=2;ODDS=2.03551;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=187496,68299;QR=108;RO=3;RPL=5278,1907;RPP=11373.2,4144.01;RPPR=9.52472;RPR=14,0;RUN=1,1;SAF=0,1;SAP=11494.4,4135.33;SAR=5292,1906;SRF=0;SRP=9.52472;SRR=3;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:55:0,32,23:0:0:32,23:1126,816:-158.497,-66.838,-57.2051,-92.0129,0,-85.0892	1/1:34:0,33,1:0:0:33,1:1159,36:-104.255,-9.93399,0,-101.318,-6.63675,-101.017	1/1:161:0,160,0:0:0:160,0:5662,0:-509.455,-48.1648,0,-509.455,-48.1648,-509.455	1/2:156:0,68,87:0:0:68,87:2395,3102:-447.928,-252.946,-232.476,-195.064,0,-168.874	1/2:33:0,14,19:0:0:14,19:501,680:-96.6643,-55.8096,-51.5952,-41.2124,0,-35.4929	1/2:12:0,8,4:0:0:8,4:288,144:-35.6088,-12.1095,-9.70126,-23.8592,0,-22.655	1/2:26:0,16,10:0:0:16,10:575,352:-75.9214,-29.0079,-24.1914,-47.2682,0,-44.2579	1/1:112:0,111,0:0:0:111,0:3915,0:-352.188,-33.4143,0,-352.188,-33.4143,-352.188	1/2:70:0,27,43:0:0:27,43:970,1544:-205.44,-126.309,-118.181,-79.49,0,-66.5457	1/2:59:0,36,23:0:0:36,23:1276,824:-171.509,-67.5596,-56.7225,-104.306,0,-97.382	1/1:87:0,87,0:0:0:87,0:3100,0:-279.228,-26.1896,0,-279.228,-26.1896,-279.228	1/2:103:1,48,54:1:36:48,54:1710,1940:-294.401,-155.323,-143.811,-136.439,0,-123.121	1/1:72:0,72,0:0:0:72,0:2558,0:-230.47,-21.6742,0,-230.47,-21.6742,-230.47	1/1:81:0,80,0:0:0:80,0:2838,0:-255.299,-24.0824,0,-255.299,-24.0824,-255.299	1/1:66:0,66,0:0:0:66,0:2354,0:-212.119,-19.868,0,-212.119,-19.868,-212.119	1/1:51:0,51,0:0:0:51,0:1825,0:-164.531,-15.3525,0,-164.531,-15.3525,-164.531	1/1:34:0,34,0:0:0:34,0:1205,0:-108.755,-10.235,0,-108.755,-10.235,-108.755	1/1:34:0,33,1:0:0:33,1:1179,36:-106.058,-9.93399,0,-103.121,-6.63675,-102.819	1/2:25:0,13,12:0:0:13,12:455,432:-72.6221,-35.6088,-31.6954,-37.3683,0,-33.756	1/2:172:0,66,106:0:0:66,106:2354,3787:-501.014,-309.119,-289.251,-192.251,0,-160.342	1/2:92:0,50,42:0:0:50,42:1789,1504:-268.894,-123.011,-107.96,-146.241,0,-133.598	1/1:63:0,63,0:0:0:63,0:2237,0:-201.594,-18.9649,0,-201.594,-18.9649,-201.594	1/1:89:0,89,0:0:0:89,0:3127,0:-281.658,-26.7917,0,-281.658,-26.7917,-281.658	1/2:31:0,28,3:0:0:28,3:983,108:-89.1668,-9.17208,-0.74324,-80.3537,0,-79.4506	1/2:90:0,49,40:0:0:49,40:1727,1431:-257.394,-116.793,-102.043,-140.703,0,-128.662	1/1:155:0,155,0:0:0:155,0:5460,0:-491.444,-46.6597,0,-491.444,-46.6597,-491.444	1/2:222:0,112,109:0:0:112,109:3995,3899:-643.719,-318.05,-284.335,-325.785,0,-292.973	1/2:45:0,21,24:0:0:21,24:752,864:-132.184,-70.8578,-64.5362,-61.6849,0,-54.4602	1/1:224:0,223,1:0:0:223,1:7910,36:-711.574,-67.1297,0,-708.637,-63.8324,-708.336	1/2:103:0,62,39:0:0:62,39:2187,1400:-292.373,-114.295,-95.6316,-178.169,0,-166.429	1/1:78:0,78,0:0:0:78,0:2764,0:-249.002,-23.4803,0,-249.002,-23.4803,-249.002	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:22:0,13,9:0:0:13,9:460,324:-64.2612,-26.7966,-22.8832,-37.8219,0,-35.1126	1/1:4:0,4,0:0:0:4,0:141,0:-13.037,-1.20412,0,-13.037,-1.20412,-13.037	1/1:13:0,13,0:0:0:13,0:463,0:-42.0073,-3.91339,0,-42.0073,-3.91339,-42.0073	1/2:29:0,10,19:0:0:10,19:353,671:-83.7416,-54.9962,-51.9859,-29.0983,0,-23.3787	1/1:205:0,204,0:0:0:204,0:7222,0:-649.788,-61.4101,0,-649.788,-61.4101,-649.788	1/2:95:0,42,53:0:0:42,53:1466,1904:-274.919,-155.683,-143.04,-119.59,0,-103.635	1/2:70:0,34,36:0:0:34,36:1196,1296:-203.461,-106.107,-95.8718,-97.7096,0,-86.8725	1/2:8:0,2,6:0:0:2,6:71,216:-23.7682,-17.9843,-17.3823,-6.14,0,-4.33382	1/1:93:0,89,4:0:0:89,4:3153,144:-283.637,-26.7917,0,-271.887,-14.6822,-270.683	1/2:30:0,14,16:0:0:14,16:489,576:-87.1299,-47.3585,-43.1441,-40.1255,0,-35.309	1/2:126:0,58,68:0:0:58,68:2074,2427:-367.329,-198.215,-180.756,-169.471,0,-149.001	1/2:66:0,26,40:0:0:26,40:920,1431:-191.98,-117.046,-109.219,-75.2899,0,-63.2487	1/1:42:0,42,0:0:0:42,0:1474,0:-132.953,-12.6433,0,-132.953,-12.6433,-132.953	1/2:113:0,50,62:0:0:50,62:1762,2232:-325.713,-182.257,-167.206,-143.587,0,-124.923	1/1:119:0,119,0:0:0:119,0:4192,0:-377.465,-35.8226,0,-377.465,-35.8226,-377.465	1/1:105:0,105,0:0:0:105,0:3723,0:-335.274,-31.6082,0,-335.274,-31.6082,-335.274	1/2:102:0,36,66:0:0:36,66:1279,2341:-295.301,-191.08,-180.243,-104.576,0,-84.7078	1/2:132:0,64,67:0:0:64,67:2256,2393:-378.838,-195.166,-175.901,-183.736,0,-163.567	1/2:127:0,43,84:0:0:43,84:1532,3024:-371.973,-247.103,-234.159,-125.228,0,-99.9413	1/2:16:0,3,13:0:0:3,13:108,468:-47.3585,-38.5463,-37.6432,-9.17208,0,-5.25869	1/2:78:0,35,43:0:0:35,43:1246,1544:-227.86,-126.309,-115.773,-101.909,0,-88.9643	1/1:27:0,27,0:0:0:27,0:964,0:-87.0768,-8.12781,0,-87.0768,-8.12781,-87.0768	1/1:9:0,9,0:0:0:9,0:316,0:-28.7785,-2.70927,0,-28.7785,-2.70927,-28.7785	1/1:132:0,132,0:0:0:132,0:4665,0:-420.017,-39.736,0,-420.017,-39.736,-420.017	1/2:43:0,20,21:0:0:20,21:707,752:-118.9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chr10	6385996	.	G	A	61350.4	PASS	AB=0.414589;ABP=612.831;AC=92;AF=0.489362;AN=188;AO=3990;CIGAR=1X;DP=9635;DPB=9635;DPRA=19.0198;EPP=8667.19;EPPR=12213.2;GTI=5;LEN=1;MEANALT=1.06522;MQM=59.99;MQMR=59.9966;NS=94;NUMALT=1;ODDS=0.744787;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=141920;QR=201233;RO=5639;RPL=0;RPP=8667.19;RPPR=12230.6;RPR=3990;RUN=1;SAF=3990;SAP=8667.19;SAR=0;SRF=5637;SRP=12230.6;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:21:18,3:18:636:3:108:-3.75354,0,-51.2464	0/1:113:58,55:58:2076:55:1959:-142.568,0,-153.094	0/1:50:14,36:14:492:36:1251:-97.8397,0,-29.5608	0/1:210:174,36:174:6221:36:1276:-51.9268,0,-496.769	0/1:77:54,23:54:1931:23:816:-50.5824,0,-150.887	0/1:61:47,14:47:1676:14:500:-26.9733,0,-132.764	0/1:100:65,35:65:2328:35:1217:-79.7283,0,-179.677	0/1:171:90,81:90:3221:81:2886:-208.501,0,-238.634	0/1:61:42,19:42:1475:19:668:-42.0823,0,-114.681	0/1:143:103,40:103:3643:40:1424:-85.4102,0,-285.026	0/1:106:57,49:57:2024:49:1760:-126.775,0,-150.524	0/1:159:119,40:119:4245:40:1425:-80.6817,0,-334.365	0/1:83:26,57:26:936:57:2042:-159.067,0,-59.574	0/1:116:30,86:30:1046:86:3076:-242.149,0,-59.5264	0/1:73:20,53:20:716:53:1891:-148.492,0,-42.7925	0/1:83:43,40:43:1532:40:1421:-103.2,0,-113.188	0/1:93:31,62:31:1116:62:2221:-171.721,0,-72.7559	0/1:117:51,65:51:1828:65:2324:-174.141,0,-129.522	0/1:59:48,11:48:1715:11:396:-18.222,0,-136.874	0/1:135:94,41:94:3357:41:1460:-91.057,0,-261.706	0/1:102:69,33:69:2453:33:1165:-74.4499,0,-190.318	0/1:28:7,21:7:248:21:742:-58.6751,0,-14.2354	0/1:69:26,42:26:936:42:1478:-112.481,0,-63.7296	0/1:194:107,87:107:3836:87:3116:-222.267,0,-287.036	0/1:34:27,7:27:964:7:252:-12.7939,0,-76.8418	0/1:286:151,135:151:5404:135:4794:-345.522,0,-400.396	0/1:182:138,44:138:4944:44:1541:-84.1923,0,-390.322	0/1:53:28,24:28:1004:24:856:-61.3479,0,-74.6625	0/1:128:47,81:47:1688:81:2869:-219.915,0,-113.675	0/1:68:54,14:54:1936:14:504:-25.2281,0,-154.046	0/1:181:96,85:96:3429:85:3006:-216.284,0,-254.266	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:19:13,5:13:456:5:180:-10.7737,0,-35.5955	0/1:356:188,168:188:6701:168:5986:-431.681,0,-495.999	0/1:103:84,19:84:3012:19:665:-29.1667,0,-240.305	0/1:123:90,33:90:3220:33:1180:-69.4814,0,-252.996	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:179:71,108:71:2552:108:3837:-291.643,0,-176.046	0/1:58:48,10:48:1728:10:360:-15.2846,0,-138.346	0/1:144:103,41:103:3677:41:1464:-88.7077,0,-287.784	0/1:160:105,55:105:3751:55:1957:-128.239,0,-289.625	0/1:135:72,63:72:2572:63:2227:-160.054,0,-191.091	0/1:118:80,38:80:2868:38:1356:-86.8189,0,-222.835	0/1:87:25,62:25:900:62:2197:-171.805,0,-55.1314	0/1:114:27,87:27:960:87:3082:-243.293,0,-52.3989	0/1:64:53,11:53:1900:11:388:-15.9914,0,-152.012	0/1:183:130,53:130:4629:53:1880:-114.39,0,-361.685	0/1:143:118,25:118:4202:25:877:-36.1979,0,-335.312	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:66:45,21:45:1608:21:746:-47.5959,0,-125.142	0/1:46:24,22:24:856:22:756:-54.5085,0,-63.5137	0/1:15:5,10:5:180:10:360:-28.2289,0,-12.0366	0/1:75:30,45:30:1072:45:1600:-121.713,0,-74.2152	0/1:77:60,17:60:2117:17:612:-32.2341,0,-167.616	0/1:10:2,8:2:72:8:280:-22.529,0,-3.82642	0/1:20:15,5:15:536:5:176:-10.1644,0,-42.5542	0/1:97:79,18:79:2840:18:636:-28.3668,0,-226.638	0/1:144:45,99:45:1604:99:3548:-276.18,0,-101.302	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:133:73,60:73:2609:60:2126:-151.572,0,-195.019	0/1:104:39,65:39:1376:65:2304:-176.315,0,-92.8288	0/1:48:29,19:29:1032:19:676:-46.7186,0,-78.744	0/1:29:8,21:8:284:21:730:-57.2908,0,-17.1735	0/1:359:285,74:285:10106:74:2652:-130.856,0,-801.406	0/1:32:14,18:14:500:18:640:-48.2964,0,-35.7032	0/1:34:15,19:15:540:19:676:-50.933,0,-38.7015	0/1:64:42,22:42:1504:22:784:-51.618,0,-116.389	0/1:120:45,75:45:1620:75:2677:-205.05,0,-109.966	0/1:23:5,18:5:180:18:644:-51.3669,0,-9.62837	0/1:88:42,46:42:1485:46:1644:-121.758,0,-107.452	0/1:61:32,29:32:1148:29:1027:-74.3793,0,-85.267	0/1:226:117,109:117:4176:109:3857:-279.295,0,-307.988	0/1:152:85,67:85:3026:67:2372:-167.983,0,-226.811	0/1:110:74,36:74:2626:36:1284:-82.7501,0,-203.471	0/1:219:177,41:177:6296:41:1468:-66.4318,0,-500.746	0/1:13:4,9:4:144:9:324:-25.5925,0,-9.40023	0/1:132:62,70:62:2220:70:2500:-185.517,0,-160.328	0/1:88:62,26:62:2216:26:920:-56.6264,0,-173.214	0/1:256:131,125:131:4666:125:4439:-322.621,0,-343.039	0/1:122:51,71:51:1813:71:2544:-192.485,0,-126.724	0/1:65:21,43:21:737:43:1528:-118.226,0,-47.0634	0/1:155:71,84:71:2548:84:3008:-224.292,0,-182.911	0/1:194:132,62:132:4698:62:2205:-140.314,0,-364.58	0/1:49:10,39:10:360:39:1388:-110.468,0,-17.9938	0/1:133:107,26:107:3835:26:932:-44.1619,0,-305.308	0/1:97:73,24:73:2608:24:841:-46.8065,0,-205.769	0/1:56:44,12:44:1576:12:432:-22.3635,0,-125.274	0/1:81:55,26:55:1953:26:928:-59.4548,0,-151.66	0/1:104:73,31:73:2620:31:1112:-69.0842,0,-204.74	0/1:128:68,60:68:2409:60:2144:-154.696,0,-178.534	0/1:214:112,102:112:3993:102:3636:-263.026,0,-295.139
chr10	6758832	.	A	T	27995.7	PASS	AB=0.389364;ABP=524.817;AC=47;AF=0.25;AN=188;AO=1927;CIGAR=1X;DP=11657;DPB=11657;DPRA=0.843629;EPP=4187.44;EPPR=21127.1;GTI=3;LEN=1;MEANALT=1;MQM=59.9092;MQMR=59.9756;NS=94;NUMALT=1;ODDS=3.91174;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=68888;QR=348049;RO=9728;RPL=0;RPP=4187.44;RPPR=21127.1;RPR=1927;RUN=1;SAF=1927;SAP=4187.44;SAR=0;SRF=9728;SRP=21127.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:109:69,40:69:2465:40:1440:-97.0855,0,-189.288	0/0:147:147,0:147:5288:0:0:0,-44.2514,-475.966	0/0:294:294,0:294:10478:0:0:0,-88.5028,-942.93	0/1:213:128,85:128:4570:85:3033:-209.078,0,-347.344	0/1:25:18,7:18:648:7:252:-15.5032,0,-51.1261	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	0/1:101:55,46:55:1976:46:1626:-116.221,0,-147.711	0/0:275:274,1:274:9762:1:36:0,-79.185,-874.924	0/1:150:100,50:100:3569:50:1788:-116.048,0,-276.262	0/1:91:61,30:61:2192:30:1065:-68.7484,0,-170.152	0/0:70:70,0:70:2520:0:0:0,-21.0721,-227.051	0/1:128:58,70:58:2080:70:2520:-188.484,0,-148.938	0/0:89:89,0:89:3185:0:0:0,-26.7917,-286.872	0/0:77:77,0:77:2757:0:0:0,-23.1793,-248.37	0/0:97:97,0:97:3488:0:0:0,-29.1999,-314.13	0/1:81:39,42:39:1404:42:1508:-111.63,0,-102.276	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:39:39,0:39:1385:0:0:0,-11.7402,-124.947	0/1:28:14,14:14:474:14:496:-36.5448,0,-34.5509	0/1:220:141,79:141:5049:79:2821:-187.899,0,-388.327	0/1:259:193,66:193:6929:66:2376:-136.131,0,-545.618	0/0:95:95,0:95:3416:0:0:0,-28.5978,-307.653	0/0:201:201,0:201:7194:0:0:0,-60.507,-647.499	0/0:127:120,7:120:4301:7:248:0,-15.5666,-364.6	0/1:122:95,27:95:3408:27:972:-51.0718,0,-270.207	0/0:290:290,0:290:10398:0:0:0,-87.2987,-935.734	0/1:334:193,141:193:6876:141:5044:-353.561,0,-518.361	0/1:40:14,26:14:500:26:921:-71.164,0,-33.295	0/0:344:344,0:344:12357:0:0:0,-103.554,-1111.83	0/1:118:80,38:80:2857:38:1356:-86.8185,0,-221.845	0/0:170:170,0:170:6101:0:0:0,-51.1751,-549.058	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/1:37:21,16:21:756:16:561:-39.679,0,-57.2291	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/0:26:26,0:26:906:0:0:0,-7.82678,-81.8509	0/1:72:46,26:46:1648:26:936:-62.8849,0,-126.934	0/0:233:233,0:233:8365:0:0:0,-70.14,-752.85	0/1:67:36,31:36:1296:31:1112:-80.2222,0,-96.7749	0/1:56:36,20:36:1296:20:711:-47.458,0,-100.086	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/0:173:170,3:170:6120:3:93:0,-43.4023,-542.22	0/1:43:21,22:21:752:22:788:-58.3005,0,-55.062	0/1:221:133,88:133:4735:88:3134:-215.755,0,-359.778	0/1:72:35,37:35:1245:37:1328:-98.1477,0,-90.6786	0/0:79:79,0:79:2840:0:0:0,-23.7814,-255.838	0/1:114:60,54:60:2156:54:1911:-137.946,0,-159.99	0/0:183:183,0:183:6535:0:0:0,-55.0885,-588.207	0/0:220:220,0:220:7870:0:0:0,-66.2266,-708.324	0/1:85:56,29:56:2012:29:1038:-68.1458,0,-155.765	0/1:168:109,59:109:3893:59:2101:-138.784,0,-299.99	0/1:145:88,57:88:3164:57:2033:-139.59,0,-241.334	0/1:16:5,11:5:180:11:396:-31.1659,0,-11.7356	0/1:174:108,66:108:3861:66:2368:-160.998,0,-295.305	0/0:115:115,0:115:4085:0:0:0,-34.6184,-367.835	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/0:220:220,0:220:7870:0:0:0,-66.2266,-708.323	0/1:83:51,32:51:1813:32:1133:-77.2912,0,-138.464	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.583	0/1:17:9,8:9:324:8:288:-21.1499,0,-24.3883	0/1:97:69,28:69:2465:28:1008:-61.8364,0,-192.902	0/0:100:99,1:99:3545:1:36:0,-26.5047,-315.658	0/1:25:10,15:10:360:15:540:-41.4108,0,-25.2186	0/1:112:75,37:75:2673:37:1328:-86.1065,0,-207.099	0/0:251:249,2:249:8903:2:72:0,-68.7218,-794.412	0/1:101:70,31:70:2501:31:1097:-68.6254,0,-194.805	0/0:141:141,0:141:5049:0:0:0,-42.4452,-454.551	0/1:226:153,73:153:5496:73:2605:-166.663,0,-426.732	0/0:244:244,0:244:8644:0:0:0,-73.4513,-777.879	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.37	0/1:42:31,11:31:1112:11:396:-23.3395,0,-87.7481	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.236	0/0:22:22,0:22:788:0:0:0,-6.62266,-71.2448	0/0:254:254,0:254:9075:0:0:0,-76.4616,-816.678	0/0:172:171,1:171:6103:1:36:0,-48.1789,-545.769	0/0:386:386,0:386:13758:0:0:0,-116.198,-1237.99	0/0:233:233,0:233:8350:0:0:0,-70.14,-751.274	0/1:97:66,31:66:2357:31:1112:-71.1914,0,-183.187	0/1:144:93,51:93:3318:51:1821:-120.802,0,-255.487	0/0:39:39,0:39:1389:0:0:0,-11.7402,-125.307	0/0:201:200,1:200:7151:1:36:0,-56.9088,-640.044	0/1:154:92,62:92:3270:62:2216:-153.33,0,-248.16	0/0:268:266,0:266:9495:0:0:0,-80.074,-854.144	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.161	0/0:100:100,0:100:3577:0:0:0,-30.103,-322.136	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.328	0/1:126:61,65:61:2196:65:2340:-172.843,0,-159.975	0/0:40:40,0:40:1440:0:0:0,-12.0412,-129.898	0/1:51:27,24:27:957:24:860:-62.3601,0,-71.0913	0/1:94:48,46:48:1728:46:1648:-120.31,0,-127.508	0/1:40:21,19:21:756:19:684:-49.8311,0,-56.326	0/1:118:66,52:66:2357:52:1868:-132.877,0,-176.865	0/1:76:32,44:32:1152:44:1572:-118.893,0,-81.1119	0/0:235:235,0:235:8452:0:0:0,-70.742,-760.674	0/0:130:130,0:130:4631:0:0:0,-39.1339,-416.95
chr10	6831869	.	T	C	36004	PASS	AB=0.513345;ABP=9.44327;AC=48;AF=0.255319;AN=188;AO=2157;CIGAR=1X;DP=8761;DPB=8761;DPRA=1.15515;EPP=4686.88;EPPR=14339.1;GTI=1;LEN=1;MEANALT=1.03704;MQM=59.9861;MQMR=59.9471;NS=94;NUMALT=1;ODDS=4.08717;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=76587;QR=235683;RO=6602;RPL=0;RPP=4686.88;RPPR=14339.1;RPR=2157;RUN=1;SAF=0;SAP=4686.88;SAR=2157;SRF=0;SRP=14339.1;SRR=6602;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:90:48,42:48:1716:42:1496:-107.842,0,-127.633	0/0:74:74,0:74:2637:0:0:0,-22.2762,-237.576	0/0:170:169,1:169:6045:1:36:0,-47.5768,-540.513	0/1:274:168,106:168:5966:106:3783:-258.185,0,-454.567	0/1:54:19,35:19:680:35:1244:-96.009,0,-45.2735	0/1:42:25,17:25:896:17:608:-42.4088,0,-68.3171	0/1:39:19,20:19:676:20:691:-50.769,0,-49.4278	0/0:160:158,2:158:5648:2:72:0,-41.3281,-500.243	0/1:131:55,76:55:1959:76:2697:-203.539,0,-137.15	0/1:76:31,45:31:1093:45:1616:-122.852,0,-75.7994	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5595	0/1:87:36,51:36:1277:51:1784:-134.653,0,-89.0406	0/0:71:71,0:71:2520:0:0:0,-21.3731,-227.053	0/0:43:43,0:43:1548:0:0:0,-12.9443,-139.613	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.453	0/1:56:28,28:28:1004:28:984:-72.0157,0,-73.8182	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4777	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/1:26:14,12:14:504:12:428:-31.032,0,-37.8713	0/1:170:92,78:92:3292:78:2731:-194.855,0,-245.324	0/1:142:68,74:68:2428:74:2643:-195.37,0,-176.022	0/0:125:125,0:125:4431:0:0:0,-37.6287,-398.96	0/0:132:132,0:132:4720:0:0:0,-39.736,-424.96	0/0:51:49,2:49:1748:2:68:0,-8.89482,-151.147	0/1:90:26,64:26:932:64:2240:-174.769,0,-57.1062	0/0:259:259,0:259:9259:0:0:0,-77.9668,-833.28	0/1:225:116,109:116:4152:109:3868:-280.582,0,-306.13	0/1:28:16,12:16:572:12:428:-30.43,0,-43.3846	0/0:323:322,1:322:11449:1:36:0,-93.6344,-1026.05	0/1:112:49,63:49:1760:63:2244:-168.501,0,-124.969	0/0:76:76,0:76:2724:0:0:0,-22.8783,-245.38	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:23:15,8:15:531:8:288:-19.3437,0,-41.1982	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.074	0/1:21:15,6:15:540:6:216:-13.4689,0,-42.6149	0/0:164:163,1:163:5856:1:36:0,-45.7706,-523.549	0/1:174:83,91:83:2980:91:3260:-241.241,0,-215.624	0/1:36:18,18:18:648:18:631:-46.2786,0,-47.8148	0/1:6:3,3:3:108:3:104:-7.89663,0,-8.26899	0/0:176:170,6:170:6061:6:216:0,-33.1908,-525.804	0/1:31:14,17:14:492:17:608:-45.7201,0,-35.2666	0/1:145:69,76:69:2480:76:2692:-198.875,0,-179.804	0/1:38:16,22:16:568:22:769:-58.0895,0,-40.0127	0/0:56:56,0:56:1995:0:0:0,-16.8577,-179.823	0/1:153:55,98:55:1976:98:3494:-268.613,0,-132.057	0/0:158:158,0:158:5663:0:0:0,-47.5627,-509.77	0/0:180:180,0:180:6436:0:0:0,-54.1854,-579.325	0/1:109:44,65:44:1565:65:2295:-173.997,0,-108.327	0/1:126:57,69:57:2044:69:2423:-180.395,0,-146.302	0/1:111:52,59:52:1845:59:2101:-155.943,0,-132.914	0/1:18:11,7:11:388:7:233:-15.8758,0,-29.8388	0/1:124:67,57:67:2396:57:2027:-145.374,0,-178.569	0/0:22:22,0:22:780:0:0:0,-6.62266,-70.523	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:160:160,0:160:5696:0:0:0,-48.1648,-512.757	0/1:56:30,26:30:1068:26:913:-65.6263,0,-79.5614	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:14:11,3:11:392:3:108:-5.86075,0,-31.4056	0/1:45:20,25:20:711:25:896:-67.414,0,-50.7693	0/0:107:107,0:107:3831:0:0:0,-32.2102,-344.986	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:243:116,126:116:4156:126:4456:-328.041,0,-301.053	0/0:139:139,0:139:4953:0:0:0,-41.8432,-445.92	0/1:81:37,44:37:1332:44:1571:-117.297,0,-95.799	0/0:109:109,0:109:3884:0:0:0,-32.8123,-349.756	0/1:170:80,90:80:2856:90:3236:-240.268,0,-206.102	0/0:127:126,1:126:4517:1:36:0,-34.6325,-403.096	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/1:74:40,34:40:1416:34:1214:-87.2903,0,-105.461	0/0:42:42,0:42:1508:0:0:0,-12.6433,-135.983	0/0:16:16,0:16:572:0:0:0,-4.81648,-51.8134	0/0:126:126,0:126:4476:0:0:0,-37.9298,-403.011	0/0:128:128,0:128:4596:0:0:0,-38.5318,-413.789	0/0:202:202,0:202:7180:0:0:0,-60.8081,-646.257	0/0:228:228,0:228:8101:0:0:0,-68.6348,-729.111	0/1:79:27,52:27:964:52:1863:-144.167,0,-63.2955	0/1:92:44,48:44:1580:48:1724:-127.751,0,-114.797	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:122:122,0:122:4330:0:0:0,-36.7257,-389.876	0/1:134:77,57:77:2741:57:2048:-144.254,0,-206.593	0/0:175:175,0:175:6238:0:0:0,-52.6802,-561.49	0/0:56:56,0:56:1996:0:0:0,-16.8577,-179.914	0/0:80:80,0:80:2851:0:0:0,-24.0824,-256.828	0/0:50:50,0:50:1776:0:0:0,-15.0515,-160.123	0/1:106:59,47:59:2116:47:1661:-117.867,0,-158.8	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:56:21,35:21:734:35:1243:-95.3162,0,-49.5227	0/1:85:50,35:50:1792:35:1233:-85.6845,0,-135.975	0/1:25:12,13:12:428:13:468:-34.9339,0,-31.3331	0/1:87:46,41:46:1644:41:1456:-105.146,0,-122.056	0/1:55:23,31:23:820:31:1087:-81.5232,0,-57.5068	0/0:152:152,0:152:5432:0:0:0,-45.7566,-489.011	0/0:82:82,0:82:2940:0:0:0,-24.6845,-264.833
chr10	6831870	.	G	T	138966	PASS	AB=0.485379;ABP=10.7572;AC=140;AF=0.744681;AN=188;AO=6596;CIGAR=1X;DP=8764;DPB=8764;DPRA=11.7688;EPP=14326;EPPR=4708.59;GTI=1;LEN=1;MEANALT=1.01075;MQM=59.953;MQMR=59.9871;NS=94;NUMALT=1;ODDS=5.04564;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235473;QR=77394;RO=2167;RPL=0;RPP=14326;RPPR=4708.59;RPR=6596;RUN=1;SAF=0;SAP=14326;SAR=6596;SRF=0;SRP=4708.59;SRR=2167;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:93:44,49:44:1565:49:1748:-129.608,0,-113.144	1/1:73:0,73:0:0:73:2596:-233.89,-21.9752,0	1/1:168:1,167:1:36:167:5976:-534.308,-46.9748,0	0/1:272:107,165:107:3821:165:5876:-447.075,0,-262.204	0/1:54:35,19:35:1243:19:676:-44.9124,0,-95.9182	0/1:42:18,24:18:644:24:856:-64.7178,0,-45.6473	0/1:40:21,19:21:748:19:680:-49.488,0,-55.6041	1/1:160:2,158:2:72:158:5626:-499.627,-41.3281,0	0/1:135:78,57:78:2789:57:2040:-143.233,0,-210.581	0/1:77:46,31:46:1652:31:1112:-77.212,0,-125.789	1/1:26:0,26:0:0:26:932:-84.1989,-7.82678,0	0/1:87:51,36:51:1824:36:1292:-90.3932,0,-138.251	1/1:70:0,70:0:0:70:2503:-225.522,-21.0721,0	1/1:43:0,43:0:0:43:1532:-138.173,-12.9443,0	1/1:68:0,68:0:0:68:2434:-219.316,-20.47,0	0/1:57:29,28:29:1044:28:1000:-73.1567,0,-77.1161	1/1:26:0,26:0:0:26:926:-83.6577,-7.82678,0	1/1:34:0,34:0:0:34:1220:-110.107,-10.235,0	0/1:26:12,14:12:424:14:496:-37.1475,0,-30.6696	0/1:172:79,93:79:2814:93:3320:-247.241,0,-201.722	0/1:141:74,67:74:2643:67:2396:-173.444,0,-195.671	1/1:126:0,126:0:0:126:4512:-406.248,-37.9298,0	1/1:134:0,134:0:0:134:4765:-429.009,-40.338,0	1/1:50:2,48:2:72:48:1708:-147.169,-8.21478,0	0/1:90:64,25:64:2287:25:888:-53.0877,0,-178.94	1/1:261:0,261:0:0:261:9330:-839.667,-78.5688,0	0/1:224:107,117:107:3836:117:4169:-307.958,0,-278.005	0/1:29:12,17:12:428:17:604:-45.9607,0,-30.1289	1/1:319:1,318:1:36:318:11355:-1016.94,-92.4303,0	0/1:107:60,47:60:2148:47:1673:-118.645,0,-161.377	1/1:77:0,77:0:0:77:2746:-247.36,-23.1793,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:23:9,14:9:324:14:504:-38.7744,0,-22.5822	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:13:0,13:0:0:13:468:-42.4032,-3.91339,0	0/1:21:6,15:6:216:15:540:-42.6149,0,-13.4689	1/1:164:0,164:0:0:164:5860:-527.512,-49.3689,0	0/1:175:91,84:91:3255:84:2995:-216.911,0,-240.49	0/1:37:19,18:19:671:18:648:-47.5138,0,-49.5777	0/1:6:3,3:3:108:3:96:-7.1519,0,-8.26899	1/1:177:6,171:6:207:171:6101:-530.225,-34.3154,0	0/1:32:16,16:16:568:16:559:-40.9909,0,-41.8189	0/1:142:73,69:73:2615:69:2461:-178.997,0,-192.851	0/1:38:22,16:22:788:16:572:-40.3743,0,-59.8057	1/1:57:0,57:0:0:57:2044:-184.232,-17.1587,0	0/1:155:99,56:99:3526:56:2004:-133.974,0,-270.888	1/1:158:0,158:0:0:158:5664:-509.861,-47.5627,0	1/1:177:0,177:0:0:177:6333:-570.06,-53.2823,0	0/1:110:66,44:66:2364:44:1550:-106.674,0,-179.905	0/1:124:68,56:68:2436:56:2000:-142.946,0,-182.168	0/1:110:59,51:59:2101:51:1828:-131.688,0,-156.244	0/1:19:7,12:7:237:12:432:-33.5016,0,-15.9395	0/1:121:54,67:54:1932:67:2396:-179.473,0,-137.732	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:156:0,156:0:0:156:5554:-499.973,-46.9607,0	0/1:55:26,29:26:905:29:1036:-76.9906,0,-65.2059	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	0/1:46:26,20:26:927:20:716:-50.9203,0,-69.9	1/1:106:0,106:0:0:106:3779:-340.31,-31.9092,0	0/0:8:8,0:8:284:0:0:0,-2.40824,-25.9034	0/1:243:126,117:126:4502:117:4188:-303.951,0,-332.198	1/1:141:0,141:0:0:141:5037:-453.475,-42.4452,0	0/1:83:46,37:46:1648:37:1328:-94.8367,0,-123.623	1/1:108:0,108:0:0:108:3872:-348.674,-32.5112,0	0/1:171:89,82:89:3177:82:2940:-213.357,0,-234.659	1/1:128:1,127:1:32:127:4523:-404.039,-35.3325,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	0/1:74:34,40:34:1212:40:1418:-105.641,0,-87.1101	1/1:42:0,42:0:0:42:1492:-134.543,-12.6433,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:128:0,128:0:0:128:4549:-409.578,-38.5318,0	1/1:127:0,127:0:0:127:4556:-410.191,-38.2308,0	1/1:201:0,201:0:0:201:7154:-643.904,-60.507,0	1/1:227:0,227:0:0:227:8108:-729.74,-68.3338,0	0/1:80:54,26:54:1936:26:932:-60.1165,0,-150.434	0/1:93:49,44:49:1760:44:1557:-112.424,0,-130.688	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:120:0,120:0:0:120:4269:-384.389,-36.1236,0	0/1:136:58,78:58:2071:78:2784:-209.861,0,-145.72	1/1:173:0,173:0:0:173:6157:-554.127,-52.0782,0	1/1:56:0,56:0:0:56:1999:-180.183,-16.8577,0	1/1:79:0,79:0:0:79:2799:-252.151,-23.7814,0	1/1:50:0,50:0:0:50:1792:-161.562,-15.0515,0	0/1:107:48,59:48:1716:59:2107:-157.688,0,-122.515	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	0/1:57:36,21:36:1292:21:743:-50.0346,0,-99.4251	0/1:86:36,50:36:1275:50:1788:-135.314,0,-89.1637	0/1:26:13,13:13:464:13:460:-33.9086,0,-34.2707	0/1:87:40,47:40:1436:47:1683:-125.559,0,-103.348	0/1:56:33,23:33:1175:23:824:-57.6252,0,-89.1993	1/1:155:0,155:0:0:155:5544:-499.085,-46.6597,0	1/1:81:0,81:0:0:81:2891:-260.426,-24.3834,0
chr10	9423249	.	CGGT	TGGG,CGGG	205645	PASS	AB=0.519933,0.475031;ABP=19.4581,28.8183;AC=140,48;AF=0.744681,0.255319;AN=188;AO=7397,2282;CIGAR=1X2M1X,3M1X;DP=9731;DPB=9731;DPRA=0,1.03936;EPP=15874.9,4914.98;EPPR=5.18177;GTI=0;LEN=4,1;MEANALT=2.12766,2.50877;MQM=59.9144,59.9658;MQMR=60;NS=94;NUMALT=2;ODDS=5.53108;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=259579,81447;QR=25;RO=1;RPL=22,5;RPP=15874.9,4914.98;RPPR=5.18177;RPR=7375,2277;RUN=1,1;SAF=7397,2282;SAP=16065.4,4958.31;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:93:0,43,47:0:0:43,47:1516,1680:-260.46,-137.026,-124.082,-123.474,0,-109.326	1/1:95:0,94,0:0:0:94,0:3314,0:-298.188,-28.2968,0,-298.188,-28.2968,-298.188	1/1:198:0,196,0:0:0:196,0:6897,0:-620.509,-59.0019,0,-620.509,-59.0019,-620.509	1/2:271:0,138,132:0:0:138,132:4763,4708:-770.846,-383.902,-342.36,-387.054,0,-347.318	1/2:63:0,35,28:0:0:35,28:1245,1004:-183.708,-82.247,-71.711,-101.818,0,-93.3896	1/2:25:0,15,10:0:0:15,10:539,360:-73.7052,-29.734,-25.2186,-44.3307,0,-41.3204	1/2:81:0,40,40:0:0:40,40:1406,1410:-229.296,-114.853,-102.812,-114.493,0,-102.452	1/1:121:0,120,1:0:0:120,1:4197,36:-377.51,-36.1236,0,-374.572,-32.8264,-374.271	1/2:138:0,73,65:0:0:73,65:2526,2320:-394.131,-188.867,-166.891,-205.616,0,-186.049	1/2:61:0,36,25:0:0:36,25:1247,888:-174.053,-72.7133,-61.8762,-101.691,0,-94.1656	1/1:79:0,79,0:0:0:79,0:2770,0:-249.536,-23.7814,0,-249.536,-23.7814,-249.536	1/2:127:0,77,49:0:0:77,49:2672,1756:-360.552,-143.361,-120.181,-217.331,0,-202.581	1/1:125:0,125,0:0:0:125,0:4412,0:-397.25,-37.6288,0,-397.25,-37.6288,-397.25	1/1:56:0,56,0:0:0:56,0:1978,0:-178.294,-16.8577,0,-178.294,-16.8577,-178.294	1/1:105:0,104,1:0:0:104,1:3692,36:-332.107,-31.3071,0,-329.17,-28.0099,-328.868	1/2:83:0,48,35:0:0:48,35:1703,1256:-241.558,-102.809,-88.3598,-139.106,0,-128.57	1/1:35:0,35,0:0:0:35,0:1233,0:-111.272,-10.5361,0,-111.272,-10.5361,-111.272	1/1:39:0,38,0:0:0:38,0:1326,0:-119.287,-11.4391,0,-119.287,-11.4391,-119.287	1/2:53:0,26,27:0:0:26,27:933,968:-155.413,-79.3096,-71.4828,-76.4624,0,-68.3346	1/2:129:0,65,63:0:0:65,63:2297,2243:-369.875,-182.807,-163.24,-187.062,0,-168.097	1/2:226:0,120,105:0:0:120,105:4198,3751:-647.122,-305.822,-269.699,-341.294,0,-309.686	1/1:73:0,73,0:0:0:73,0:2547,0:-229.48,-21.9752,0,-229.48,-21.9752,-229.48	1/1:163:0,161,2:0:0:161,2:5646,72:-507.906,-48.4658,0,-502.031,-42.2312,-501.429	1/1:96:0,91,3:0:0:91,3:3188,108:-286.818,-27.3937,0,-278.006,-18.5263,-277.103	1/2:117:0,87,30:0:0:87,30:3030,1076:-334.507,-88.122,-61.9323,-246.741,0,-237.71	1/1:197:0,195,0:0:0:195,0:6858,0:-616.98,-58.7009,0,-616.98,-58.7009,-616.98	1/2:372:1,202,168:1:25:202,168:7058,5982:-1059.49,-485.662,-426.802,-572.227,0,-523.602	1/2:51:0,26,24:0:0:26,24:926,858:-145.49,-70.0146,-62.1878,-75.5292,0,-68.3045	1/1:240:0,240,0:0:0:240,0:8348,0:-751.342,-72.2472,0,-751.342,-72.2472,-751.342	1/2:68:0,28,39:0:0:28,39:988,1400:-194.649,-114.199,-105.77,-80.4453,0,-68.7052	1/1:105:0,105,0:0:0:105,0:3654,0:-329.066,-31.6082,0,-329.066,-31.6082,-329.066	1/1:17:0,17,0:0:0:17,0:580,0:-52.5177,-5.11751,0,-52.5177,-5.11751,-52.5177	1/2:27:0,11,16:0:0:11,16:388,570:-78.4077,-46.8163,-43.5049,-31.9455,0,-27.129	1/1:8:0,8,0:0:0:8,0:282,0:-25.7211,-2.40824,0,-25.7211,-2.40824,-25.7211	1/1:20:0,20,0:0:0:20,0:704,0:-63.6837,-6.0206,0,-63.6837,-6.0206,-63.6837	1/2:42:0,23,19:0:0:23,19:812,680:-121.931,-55.8096,-48.8859,-66.4768,0,-60.7573	1/1:224:0,224,0:0:0:224,0:7908,0:-711.751,-67.4307,0,-711.751,-67.4307,-711.751	1/2:89:0,56,33:0:0:56,33:1964,1184:-256.754,-96.9343,-80.0766,-160.176,0,-150.242	1/2:55:0,28,26:0:0:28,26:993,923:-156.101,-75.2003,-66.7715,-80.8953,0,-73.0686	1/1:4:0,4,0:0:0:4,0:140,0:-12.9446,-1.20412,0,-12.9446,-1.20412,-12.9446	1/1:161:0,154,7:0:0:154,7:5401,252:-485.853,-46.3586,0,-465.291,-25.4369,-463.184	1/1:57:0,57,0:0:0:57,0:1983,0:-178.683,-17.1587,0,-178.683,-17.1587,-178.683	1/2:129:0,67,62:0:0:67,62:2378,2217:-374.882,-181.13,-160.961,-194.108,0,-175.445	1/2:81:0,48,33:0:0:48,33:1711,1179:-235.952,-96.4832,-82.0338,-139.826,0,-129.892	1/1:69:0,67,0:0:0:67,0:2320,0:-208.798,-20.169,0,-208.798,-20.169,-208.798	1/2:147:0,74,73:0:0:74,73:2589,2608:-423.616,-212.993,-190.717,-210.976,0,-189.001	1/1:143:0,142,0:0:0:142,0:5002,0:-450.076,-42.7463,0,-450.076,-42.7463,-450.076	1/1:204:0,200,1:0:0:200,1:7017,36:-631.264,-60.206,0,-628.327,-57.2586,-628.026	1/2:89:0,48,41:0:0:48,41:1709,1468:-259.205,-120.074,-105.624,-139.488,0,-127.146	1/2:110:0,63,47:0:0:63,47:2220,1688:-318.799,-138.059,-119.094,-181.097,0,-166.948	1/2:113:0,51,62:0:0:51,62:1783,2213:-325.813,-180.769,-165.417,-145.397,0,-126.733	1/2:14:0,11,2:0:0:11,2:382,72:-36.9186,-5.87483,-2.5635,-31.0421,0,-30.4401	1/2:134:0,62,72:0:0:62,72:2174,2580:-387.681,-210.775,-192.111,-177.26,0,-155.586	1/2:35:0,19,16:0:0:19,16:664,563:-100.196,-46.1827,-40.4631,-54.3638,0,-49.5473	1/1:15:0,15,0:0:0:15,0:528,0:-47.8513,-4.51545,0,-47.8513,-4.51545,-47.8513	1/1:199:0,197,0:0:0:197,0:6935,0:-623.864,-59.3029,0,-623.864,-59.3029,-623.864	1/2:117:0,49,68:0:0:49,68:1707,2444:-338.552,-199.745,-184.994,-139.161,0,-118.691	1/1:12:0,12,0:0:0:12,0:428,0:-38.8588,-3.61236,0,-38.8588,-3.61236,-38.8588	1/2:11:0,2,9:0:0:2,9:65,309:-30.6742,-25.4314,-24.8294,-5.57097,0,-2.8617	1/2:108:0,60,48:0:0:60,48:2128,1712:-313.226,-139.916,-121.854,-173.665,0,-159.215	1/1:83:0,82,1:0:0:82,1:2880,36:-259.078,-24.6845,0,-256.14,-21.3872,-255.839	1/2:4:0,1,3:0:0:1,3:36,102:-11.5557,-8.61329,-8.31226,-3.29724,0,-2.39415	1/2:146:0,65,80:0:0:65,80:2272,2849:-417.136,-232.313,-212.746,-184.923,0,-160.84	1/1:167:0,167,0:0:0:167,0:5877,0:-529.046,-50.272,0,-529.046,-50.272,-529.046	1/2:55:0,29,26:0:0:29,26:1013,932:-158.767,-76.3721,-67.6422,-82.7486,0,-74.9218	1/1:110:0,109,0:0:0:109,0:3826,0:-344.18,-32.8123,0,-344.18,-32.8123,-344.18	1/2:165:0,99,64:0:0:99,64:3504,2296:-472.751,-187.338,-157.536,-285.473,0,-266.207	1/1:169:0,167,1:0:0:167,1:5903,36:-531.024,-50.272,0,-528.087,-47.3346,-527.786	1/2:52:0,32,20:0:0:32,20:1139,711:-151.126,-58.295,-48.6621,-93.186,0,-87.1654	1/2:54:0,33,21:0:0:33,21:1127,747:-152.669,-61.2245,-51.2905,-91.795,0,-85.4733	1/1:38:0,38,0:0:0:38,0:1318,0:-118.915,-11.4391,0,-118.915,-11.4391,-118.915	1/1:37:0,36,0:0:0:36,0:1240,0:-111.684,-10.8371,0,-111.684,-10.8371,-111.684	1/1:134:0,134,0:0:0:134,0:4667,0:-419.88,-40.338,0,-419.88,-40.338,-419.88	1/1:130:0,129,0:0:0:129,0:4556,0:-409.96,-38.8329,0,-409.96,-38.8329,-409.96	1/1:102:0,101,0:0:0:101,0:3474,0:-312.644,-30.404,0,-312.644,-30.404,-312.644	1/1:233:0,233,0:0:0:233,0:8218,0:-739.641,-70.14,0,-739.641,-70.14,-739.641	1/2:110:0,69,41:0:0:69,41:2431,1468:-317.992,-120.074,-99.3028,-198.274,0,-185.932	1/2:169:0,75,94:0:0:75,94:2625,3352:-486.942,-273.601,-251.024,-213.693,0,-185.396	1/1:15:0,14,0:0:0:14,0:495,0:-44.5243,-4.21442,0,-44.5243,-4.21442,-44.5243	1/1:156:0,155,0:0:0:155,0:5505,0:-495.22,-46.6597,0,-495.22,-46.6597,-495.22	1/2:140:0,66,71:0:0:66,71:2283,2540:-392.703,-207.192,-187.324,-185.575,0,-164.202	1/1:201:0,201,0:0:0:201,0:7031,0:-632.825,-60.507,0,-632.825,-60.507,-632.825	1/1:83:0,82,0:0:0:82,0:2885,0:-259.587,-24.6845,0,-259.587,-24.6845,-259.587	1/1:98:0,96,0:0:0:96,0:3364,0:-302.644,-28.8989,0,-302.644,-28.8989,-302.644	1/1:58:0,57,0:0:0:57,0:2018,0:-181.442,-17.1587,0,-181.442,-17.1587,-181.442	1/2:170:0,86,84:0:0:86,84:3030,2986:-489.747,-243.059,-217.17,-247.041,0,-221.755	1/2:28:0,16,11:0:0:16,11:555,392:-77.0563,-31.9492,-27.1327,-45.1003,0,-41.789	1/2:88:0,41,47:0:0:41,47:1459,1649:-253.457,-134.547,-122.205,-119.263,0,-105.115	1/2:83:0,37,45:0:0:37,45:1284,1597:-234.588,-130.22,-119.082,-104.465,0,-90.919	1/2:56:0,26,28:0:0:26,28:917,989:-155.301,-80.6325,-72.8057,-74.7562,0,-66.3273	1/2:70:0,37,33:0:0:37,33:1291,1188:-202.291,-97.2946,-86.1565,-105.351,0,-95.4172	1/2:117:0,35,82:0:0:35,82:1238,2931:-340.171,-239.34,-228.804,-101.186,0,-76.502	1/1:122:0,120,1:0:0:120,1:4180,36:-376.071,-36.1236,0,-373.134,-33.1357,-372.833	1/1:169:0,169,0:0:0:169,0:5936,0:-534.284,-50.8741,0,-534.284,-50.8741,-534.284
chr10	10249528	.	T	C	27976.9	PASS	AB=0.455746;ABP=67.3943;AC=50;AF=0.265957;AN=188;AO=1744;CIGAR=1X;DP=7979;DPB=7979;DPRA=0.879058;EPP=3781.38;EPPR=13485.7;GTI=3;LEN=1;MEANALT=1.03571;MQM=56.6462;MQMR=59.7818;NS=94;NUMALT=1;ODDS=2.84835;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62343;QR=220782;RO=6233;RPL=3;RPP=3764.05;RPPR=13356;RPR=1741;RUN=1;SAF=2;SAP=3772.71;SAR=1742;SRF=15;SRP=13407.8;SRR=6218;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:50:31,19:31:1096:19:669:-45.4437,0,-83.8847	0/0:54:54,0:54:1902:0:0:0,-16.2556,-171.451	0/0:117:117,0:117:4132:0:0:0,-35.2205,-371.871	0/1:162:100,62:100:3539:62:2222:-151.008,0,-269.928	0/1:38:15,23:15:527:23:813:-61.8806,0,-36.321	0/1:38:21,17:21:737:17:612:-43.9602,0,-55.2111	0/1:83:39,44:39:1388:44:1570:-115.47,0,-100.231	0/0:133:133,0:133:4714:0:0:0,-40.037,-424.268	0/1:65:44,21:44:1572:21:752:-48.3502,0,-122.182	0/1:71:37,34:37:1309:34:1224:-88.7519,0,-96.7317	0/0:82:82,0:82:2887:0:0:0,-24.6845,-260.064	0/1:105:54,51:54:1925:51:1797:-130.25,0,-141.911	0/0:66:66,0:66:2345:0:0:0,-19.868,-211.289	0/0:55:54,1:54:1932:1:36:0,-12.9584,-170.554	0/0:61:61,0:61:2105:0:0:0,-18.3628,-189.704	0/1:51:30,21:30:1064:21:744:-51.7115,0,-80.716	0/0:66:66,0:66:2330:0:0:0,-19.868,-209.952	0/0:49:49,0:49:1748:0:0:0,-14.7505,-157.604	0/1:42:25,16:25:881:16:576:-39.4556,0,-66.8943	0/1:117:65,52:65:2265:52:1859:-131.25,0,-168.883	0/1:147:83,64:83:2957:64:2272:-158.802,0,-222.077	0/0:91:91,0:91:3226:0:0:0,-27.3937,-290.553	0/0:78:78,0:78:2774:0:0:0,-23.4803,-249.81	0/0:80:76,4:76:2698:4:144:0,-10.7751,-229.744	0/1:74:44,30:44:1561:30:1072:-74.4359,0,-118.172	0/0:229:229,0:229:8079:0:0:0,-68.9359,-727.123	0/1:201:105,96:105:3703:96:3448:-249.228,0,-272.947	0/1:30:16,14:16:576:14:504:-36.65,0,-43.1394	0/0:219:219,0:219:7750:0:0:0,-65.9256,-697.26	0/1:94:56,38:56:1989:38:1348:-93.1386,0,-150.492	0/0:114:114,0:114:4060:0:0:0,-34.3174,-365.575	0/0:12:12,0:12:402:0:0:0,-3.61236,-36.4992	0/1:6:5,1:5:180:1:36:-1.7895,0,-14.7459	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7871	0/0:9:9,0:9:309:0:0:0,-2.70927,-28.1407	0/1:7:2,5:2:68:5:180:-14.4421,0,-4.3505	0/0:210:210,0:210:7421:0:0:0,-63.2163,-667.843	0/1:130:60,70:60:2107:70:2516:-187.402,0,-150.688	0/1:71:23,48:23:820:48:1715:-133.147,0,-52.7494	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	0/0:126:123,3:123:4355:3:108:0,-27.8594,-382.033	0/0:47:47,0:47:1653:0:0:0,-14.1484,-149.056	0/1:124:68,56:68:2399:56:2008:-143.426,0,-178.811	0/1:81:51,30:51:1805:30:1032:-68.7372,0,-138.344	0/0:70:70,0:70:2493:0:0:0,-21.0721,-224.613	0/1:94:58,36:58:2046:36:1292:-88.2555,0,-156.041	0/0:93:93,0:93:3279:0:0:0,-27.9958,-295.326	0/0:150:150,0:150:5286:0:0:0,-45.1545,-475.858	0/1:111:74,37:74:2584:37:1317:-84.0704,0,-199.386	0/1:108:65,43:65:2317:43:1548:-106.929,0,-176.275	0/1:130:62,68:62:2202:68:2440:-180.552,0,-159.199	0/1:11:7,4:7:252:4:144:-9.99269,0,-19.7176	0/1:73:42,31:42:1508:31:1112:-78.3888,0,-114.03	0/1:61:29,32:29:1040:32:1139:-84.4162,0,-75.5506	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/0:147:147,0:147:5264:0:0:0,-44.2514,-473.888	0/1:51:25,26:25:900:26:936:-69.1687,0,-65.1868	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:6:4,2:4:144:2:72:-5.02863,0,-11.5074	0/1:82:43,39:43:1533:39:1391:-100.685,0,-113.566	0/0:136:133,2:133:4760:2:72:0,-34.1606,-420.994	1/1:5:0,5:0:0:5:180:-16.5401,-1.50515,0	0/1:150:75,75:75:2636:75:2696:-197.454,0,-192.323	0/0:105:105,0:105:3737:0:0:0,-31.6081,-336.427	0/1:41:18,23:18:648:23:806:-60.4505,0,-46.3066	0/0:100:100,0:100:3577:0:0:0,-30.103,-321.964	0/1:155:79,76:79:2805:76:2721:-197.411,0,-205.953	0/0:94:92,2:92:3255:2:72:0,-21.465,-286.334	0/1:27:18,9:18:644:9:324:-21.2959,0,-50.1628	0/1:55:31,24:31:1093:24:864:-61.5055,0,-82.121	0/0:55:55,0:55:1866:0:0:0,-16.5566,-168.206	0/0:30:30,0:30:1042:0:0:0,-9.0309,-94.0679	0/0:109:109,0:109:3889:0:0:0,-32.8123,-350.198	0/0:76:76,0:76:2683:0:0:0,-22.8783,-241.083	0/0:157:156,1:156:5566:1:36:0,-43.6651,-497.447	0/0:103:103,0:103:3658:0:0:0,-31.0061,-329.402	0/1:92:52,40:52:1830:40:1432:-101.199,0,-137.281	0/1:69:42,27:42:1508:27:953:-65.2586,0,-115.244	0/0:10:10,0:10:345:0:0:0,-3.0103,-31.3808	0/0:84:84,0:84:2982:0:0:0,-25.2865,-268.607	0/1:114:62,52:62:2171:52:1864:-133.6,0,-161.303	0/0:262:262,0:262:9298:0:0:0,-78.8699,-836.767	0/0:101:101,0:101:3577:0:0:0,-30.404,-322.124	0/0:65:64,1:64:2257:1:36:0,-15.9713,-199.755	0/0:66:66,0:66:2349:0:0:0,-19.868,-211.66	0/1:124:57,67:57:2033:67:2408:-179.429,0,-145.903	0/1:30:15,15:15:521:15:536:-39.3188,0,-38.1854	0/1:64:40,24:40:1417:24:860:-58.4388,0,-108.559	0/1:89:51,38:51:1809:38:1356:-95.5172,0,-136.295	0/1:50:24,26:24:860:26:932:-68.7539,0,-62.6703	0/1:139:82,57:82:2883:57:2035:-141.164,0,-217.809	0/1:64:26,38:26:902:38:1368:-104.067,0,-62.2221	0/0:141:141,0:141:5002:0:0:0,-42.4452,-449.298	0/0:111:111,0:111:3969:0:0:0,-33.4143,-357.395
chr10	12407210	.	AAGAG	TGGAA,TAGAA	221835	PASS	AB=0.503493,0.491093;ABP=3.61707,6.95581;AC=136,52;AF=0.723404,0.276596;AN=188;AO=7917,2825;CIGAR=2X2M1X,1X3M1X;DP=10800;DPB=10800;DPRA=0,1.04786;EPP=17125.1,6111.39;EPPR=7.35324;GTI=0;LEN=5,5;MEANALT=2.21277,2.59322;MQM=54.2198,59.732;MQMR=60;NS=94;NUMALT=2;ODDS=13.714;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=275911,98539;QR=69;RO=2;RPL=7910,2822;RPP=17133.8,6111.39;RPPR=7.35324;RPR=7,3;RUN=1,1;SAF=7916,2825;SAP=17185.9,6137.42;SAR=1,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:107:0,66,40:0:0:66,40:2288,1355:-295.385,-109.899,-90.0309,-185.526,0,-173.485	1/1:94:0,91,2:0:0:91,2:3127,71:-280.172,-27.3937,0,-274.386,-21.6119,-273.784	1/1:204:0,204,0:0:0:204,0:7100,0:-636.788,-61.4101,0,-636.788,-61.4101,-636.788	1/2:320:0,171,148:0:0:171,148:5966,5145:-902.186,-418.274,-366.798,-483.9,0,-439.348	1/2:105:0,61,44:0:0:61,44:2153,1529:-298.796,-124.623,-106.26,-174.522,0,-161.276	1/2:57:0,21,36:0:0:21,36:713,1225:-157.263,-99.7129,-93.3913,-57.8891,0,-47.052	1/2:142:0,69,73:0:0:69,73:2399,2541:-401.749,-206.966,-186.195,-195.13,0,-173.155	1/1:137:0,137,0:0:0:137,0:4770,0:-427.547,-41.2411,0,-427.547,-41.2411,-427.547	1/2:132:0,63,69:0:0:63,69:2193,2400:-373.25,-195.488,-176.523,-178.109,0,-157.338	1/2:103:0,44,59:0:0:44,59:1516,2044:-289.478,-166.456,-153.211,-123.367,0,-105.606	1/1:47:0,47,0:0:0:47,0:1659,0:-149.451,-14.1484,0,-149.451,-14.1484,-149.451	1/2:118:0,73,45:0:0:73,45:2569,1567:-334.832,-127.768,-105.793,-207.412,0,-193.866	1/1:77:0,77,0:0:0:77,0:2697,0:-242.302,-23.1793,0,-242.302,-23.1793,-242.302	1/1:55:0,55,0:0:0:55,0:1937,0:-174.027,-16.5567,0,-174.027,-16.5567,-174.027	1/1:82:0,82,0:0:0:82,0:2887,0:-259.656,-24.6845,0,-259.656,-24.6845,-259.656	1/2:74:0,39,35:0:0:39,35:1356,1242:-211.583,-101.493,-89.7525,-110.441,0,-99.9051	1/1:34:0,34,0:0:0:34,0:1170,0:-105.23,-10.235,0,-105.23,-10.235,-105.23	1/1:34:0,34,0:0:0:34,0:1186,0:-106.776,-10.235,0,-106.776,-10.235,-106.776	1/2:32:0,18,14:0:0:18,14:635,489:-91.6584,-40.1261,-34.7075,-51.8826,0,-47.6681	1/2:214:0,112,102:0:0:112,102:3855,3564:-602.363,-290.262,-256.546,-312.448,0,-281.743	1/2:202:0,107,95:0:0:107,95:3730,3326:-573.386,-270.864,-238.654,-302.871,0,-274.273	1/1:174:0,173,0:0:0:173,0:6056,0:-544.051,-52.0782,0,-544.051,-52.0782,-544.051	1/2:184:0,94,89:0:0:94,89:3264,3101:-516.903,-252.256,-223.959,-264.725,0,-237.933	1/1:111:0,106,4:0:0:106,4:3710,144:-332.85,-31.9092,0,-321.1,-20.1195,-319.896	1/2:124:0,67,56:0:0:67,56:2317,1958:-347.219,-159.415,-139.246,-187.929,0,-171.071	1/1:329:0,327,0:0:0:327,0:11407,0:-1024.57,-98.4368,0,-1024.57,-98.4368,-1024.57	1/2:369:0,186,181:0:0:186,181:6467,6316:-1037.8,-513.633,-457.642,-524.156,0,-469.67	1/2:35:0,16,19:0:0:16,19:563,662:-99.8478,-54.1839,-49.3674,-46.0135,0,-40.2939	1/1:369:0,368,0:0:0:368,0:12823,0:-1151.49,-110.779,0,-1151.49,-110.779,-1151.49	1/2:131:0,82,48:0:0:82,48:2849,1709:-370.386,-139.287,-114.603,-231.091,0,-216.642	1/1:156:0,154,0:0:0:154,0:5313,0:-477.119,-46.3586,0,-477.119,-46.3586,-477.119	1/1:10:0,10,0:0:0:10,0:360,0:-32.6979,-3.0103,0,-32.6979,-3.0103,-32.6979	1/2:26:0,14,12:0:0:14,12:492,415:-74.0379,-34.0686,-29.8542,-40.3172,0,-36.7049	1/1:11:0,11,0:0:0:11,0:385,0:-34.9002,-3.31133,0,-34.9002,-3.31133,-34.9002	1/1:9:0,9,0:0:0:9,0:324,0:-29.4317,-2.70927,0,-29.4317,-2.70927,-29.4317	1/2:40:0,19,21:0:0:19,21:655,740:-113.641,-60.596,-54.8765,-53.3926,0,-47.0709	1/1:218:0,217,0:0:0:217,0:7612,0:-683.648,-65.3235,0,-683.648,-65.3235,-683.648	1/2:175:0,114,59:0:0:114,59:3981,2070:-491.429,-168.227,-133.909,-323.2,0,-305.439	1/2:45:0,28,17:0:0:28,17:973,594:-126.258,-48.6652,-40.2364,-77.9388,0,-72.8213	1/2:17:0,7,9:0:0:7,9:240,311:-44.6907,-25.2391,-23.1319,-19.4384,0,-16.7292	1/1:199:0,194,3:0:0:194,3:6765,108:-606.614,-58.3998,0,-597.801,-49.5844,-596.898	1/1:40:0,40,0:0:0:40,0:1387,0:-124.657,-12.0412,0,-124.657,-12.0412,-124.657	1/2:214:0,118,95:0:0:118,95:4125,3326:-604.414,-270.652,-235.131,-333.81,0,-305.212	1/2:81:0,39,42:0:0:39,42:1352,1494:-231.842,-122.112,-110.372,-110.081,0,-97.4374	1/1:75:0,75,0:0:0:75,0:2613,0:-235.156,-22.5773,0,-235.156,-22.5773,-235.156	1/2:178:0,83,95:0:0:83,95:2870,3319:-502.761,-270.33,-245.344,-232.778,0,-204.18	1/1:198:0,196,0:0:0:196,0:6845,0:-612.862,-59.0019,0,-612.862,-59.0019,-612.862	1/1:172:0,171,1:0:0:171,1:5960,36:-535.225,-51.4761,0,-532.287,-48.1789,-531.986	1/2:109:0,55,53:0:0:55,53:1879,1802:-298.02,-145.872,-129.316,-152.138,0,-136.183	1/2:125:0,58,67:0:0:58,67:2002,2332:-352.3,-189.971,-172.511,-162.675,0,-142.506	1/2:165:0,92,72:0:0:92,72:3205,2469:-460.958,-200.451,-172.756,-260.507,0,-238.833	1/2:14:0,7,7:0:0:7,7:251,244:-40.6535,-20.1923,-18.0851,-20.8145,0,-18.7073	1/2:176:0,90,85:0:0:90,85:3118,2985:-495.008,-243.022,-215.929,-252.063,0,-226.476	1/2:100:0,50,48:0:0:50,48:1746,1679:-278.578,-136.594,-121.542,-141.98,0,-127.53	1/1:17:0,17,0:0:0:17,0:590,0:-53.2727,-5.11751,0,-53.2727,-5.11751,-53.2727	1/1:189:0,187,0:0:0:187,0:6504,0:-583.443,-56.2926,0,-583.443,-56.2926,-583.443	1/2:66:0,25,40:0:0:25,40:869,1379:-182.627,-112.064,-104.538,-70.6069,0,-58.5657	1/1:19:0,19,0:0:0:19,0:664,0:-59.9744,-5.71957,0,-59.9744,-5.71957,-59.9744	1/2:16:0,8,7:0:0:8,7:278,238:-41.9134,-19.3136,-16.9054,-22.6109,0,-20.5037	1/2:119:0,50,67:0:0:50,67:1730,2317:-328.494,-188.286,-173.234,-140.218,0,-120.049	1/1:102:0,101,0:0:0:101,0:3571,0:-321.026,-30.404,0,-321.026,-30.404,-321.026	1/2:9:0,3,6:0:0:3,6:107,214:-26.328,-17.8016,-16.8986,-8.8781,0,-7.07192	1/2:179:0,80,99:0:0:80,99:2799,3461:-509.439,-281.824,-257.741,-227.965,0,-198.163	1/1:209:0,206,0:0:0:206,0:7220,0:-648.888,-62.0122,0,-648.888,-62.0122,-648.888	1/2:82:0,29,52:0:0:29,52:1013,1791:-227.692,-145.571,-136.841,-82.2236,0,-66.57	1/1:102:0,101,0:0:0:101,0:3498,0:-314.254,-30.404,0,-314.254,-30.404,-314.254	1/2:238:0,114,124:0:0:114,124:3988,4328:-675.321,-352.364,-318.047,-323.306,0,-285.978	1/1:171:0,169,1:0:0:169,1:5873,35:-527.598,-50.8741,0,-524.75,-48.0063,-524.449	1/2:49:0,23,25:0:0:23,25:791,872:-135.128,-70.9839,-64.0602,-64.238,0,-56.7122	1/2:75:0,34,41:0:0:34,41:1198,1409:-212.027,-114.755,-104.52,-97.62,0,-85.2778	1/1:73:0,72,0:0:0:72,0:2542,0:-227.613,-21.6742,0,-227.613,-21.6742,-227.613	1/1:28:0,28,0:0:0:28,0:989,0:-89.2656,-8.42884,0,-89.2656,-8.42884,-89.2656	1/1:113:0,112,0:0:0:112,0:3867,0:-346.863,-33.7154,0,-346.863,-33.7154,-346.863	1/1:103:0,103,0:0:0:103,0:3618,0:-324.854,-31.0061,0,-324.854,-31.0061,-324.854	1/1:189:0,188,0:0:0:188,0:6532,0:-585.596,-56.5936,0,-585.596,-56.5936,-585.596	1/1:191:0,190,0:0:0:190,0:6629,0:-595.201,-57.1957,0,-595.201,-57.1957,-595.201	1/2:115:0,51,64:0:0:51,64:1774,2247:-326.765,-183.198,-167.845,-143.916,0,-124.65	1/2:88:0,45,42:0:0:45,42:1543,1458:-243.212,-118.606,-105.06,-124.687,0,-112.043	1/2:13:0,7,6:0:0:7,6:248,215:-38.0392,-17.893,-15.7858,-20.5022,0,-18.696	1/2:107:0,43,63:0:0:43,63:1517,2185:-300.819,-177.595,-164.65,-123.225,0,-104.26	1/2:122:0,51,70:0:0:51,70:1735,2456:-340.169,-199.94,-184.588,-140.301,0,-119.229	1/1:295:0,293,1:0:0:293,1:10174,35:-913.729,-88.2018,0,-910.882,-85.3589,-910.581	1/1:61:0,61,0:0:0:61,0:2129,0:-191.66,-18.3628,0,-191.66,-18.3628,-191.66	1/1:53:0,53,0:0:0:53,0:1872,0:-168.532,-15.9546,0,-168.532,-15.9546,-168.532	1/1:61:1,60,0:1:36:60,0:2116,0:-186.722,-14.7646,0,-187.023,-18.0618,-189.961	1/2:149:1,80,67:1:33:80,67:2824,2356:-418.505,-189.109,-167.694,-227.041,0,-209.54	1/2:26:0,11,15:0:0:11,15:394,534:-75.9205,-43.8785,-40.5671,-32.3986,0,-27.8832	1/2:84:0,43,39:0:0:43,39:1489,1386:-233.279,-112.949,-100.005,-120.344,0,-108.604	1/2:62:0,30,30:0:0:30,30:1050,1053:-170.79,-85.6674,-76.6365,-85.114,0,-76.0831	1/2:34:0,10,24:0:0:10,24:350,856:-98.4709,-70.1371,-67.1268,-28.6845,0,-21.4598	1/2:103:0,59,44:0:0:59,44:2054,1540:-292.103,-125.601,-107.84,-166.851,0,-153.606	1/2:76:0,24,52:0:0:24,52:837,1826:-216.982,-148.957,-141.733,-68.3739,0,-52.7203	1/1:135:0,135,0:0:0:135,0:4671,0:-419.964,-40.6391,0,-419.964,-40.6391,-419.964	1/1:128:0,127,1:0:0:127,1:4449,36:-398.456,-38.2308,0,-395.519,-34.9336,-395.218
chr10	13229743	.	TTTTTTCTTTTTTTTCCTTTTTGGC	TTTTTTCTTTCTTTTTTGGC,TTTTTTTTTTCCTTTCCTTTTTGGC,TTTTTTTTTTTTCCTTTCCTTTTTGGC,TTTTTCTTTCTTTTTTGGC	125331	PASS	AB=0.508497,0.432694,0.318565,0.0899415;ABP=6.29467,177.516,138.539,5491.63;AC=124,47,5,12;AF=0.659574,0.25,0.0265957,0.0638298;AN=188;AO=5914,1928,151,615;CIGAR=7M5D4M1X8M,6M1X3M2X13M,6M1X5M2I13M,1M6D4M1X4M1X8M;DP=8971;DPB=7618.04;DPRA=0,0.831934,0.76165,1.74721;EPP=12845.1,4189.61,330.903,1338.47;EPPR=0;GTI=10;LEN=20,25,27,19;MEANALT=4.59574,4.87719,6,5.25;MQM=35.4584,27.7635,27,27.3333;MQMR=0;NS=94;NUMALT=4;ODDS=2962.12;PAIRED=0,0,0,0;PAIREDR=0;PAO=58.4,58.4,58.4,59;PQA=2004.37,2004.37,2004.37,2012.17;PQR=2004.37;PRO=58.4;QA=198208,53447,4035,16618;QR=0;RO=0;RPL=0,0,0,0;RPP=12845.1,4189.61,330.903,1338.47;RPPR=0;RPR=5914,1928,151,615;RUN=1,1,1,1;SAF=0,0,0,0;SAP=12845.1,4189.61,330.903,1338.47;SAR=5914,1928,151,615;SRF=0;SRP=0;SRR=0;TYPE=complex,complex,complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:23:0,10,10,0,0:0:0:10,10,0,0:330,300,0,0:-45.506,-21.2852,-18.2749,-24.2341,0,-21.2238,-45.506,-21.2852,-24.2341,-45.506,-45.506,-21.2852,-24.2341,-45.506,-45.506	1/1:125:0,106,1,0,13:0:0:106,1,0,13:3527,30,0,357:-291.932,-31.9092,0,-289.804,-29.7806,-289.503,-291.932,-31.9092,-289.804,-291.932,-267.04,-7.04973,-264.912,-267.04,-263.126	1/1:156:0,138,0,0,10:0:0:138,0,0,10:4629,0,0,266:-383.542,-41.5421,0,-383.542,-41.5421,-383.542,-383.542,-41.5421,-383.542,-383.542,-364.922,-22.9334,-364.922,-364.922,-361.912	1/2:182:0,77,94,0,6:0:0:77,94,0,6:2519,2535,0,156:-357.615,-174.574,-151.395,-183.059,0,-154.762,-357.615,-174.574,-183.059,-357.615,-346.822,-163.78,-172.269,-346.822,-345.015	1/2:80:0,32,44,0,0:0:0:32,44,0,0:1108,1197,0,0:-166.137,-82.5065,-72.8735,-83.6018,0,-70.3565,-166.137,-82.5065,-83.6018,-166.137,-166.137,-82.5065,-83.6018,-166.137,-166.137	1/2:74:0,31,39,0,4:0:0:31,39,0,4:1028,1156,0,112:-157.98,-82.0099,-72.678,-75.993,0,-64.2528,-157.98,-82.0099,-75.993,-157.98,-150.189,-74.2182,-68.2061,-150.189,-148.985	1/2:134:0,56,64,0,7:0:0:56,64,0,7:1827,1726,0,189:-251.638,-118.742,-101.885,-132.902,0,-113.636,-251.638,-118.742,-132.902,-251.638,-238.63,-105.734,-119.898,-238.63,-236.523	1/1:156:0,126,1,0,13:0:0:126,1,0,13:4269,30,0,357:-353.212,-37.9298,0,-351.084,-35.8015,-350.783,-353.212,-37.9298,-351.084,-353.212,-328.318,-13.0493,-326.19,-328.318,-324.405	1/2:98:0,48,31,0,15:0:0:48,31,0,15:1575,908,0,420:-179.868,-64.2811,-49.8317,-115.595,0,-106.263,-179.868,-64.2811,-115.595,-179.868,-150.649,-35.0619,-86.3816,-150.649,-146.133	1/2:79:0,44,30,0,4:0:0:44,30,0,4:1401,810,0,108:-157.272,-55.7281,-42.4828,-101.537,0,-92.506,-157.272,-55.7281,-101.537,-157.272,-149.84,-48.2949,-94.1075,-149.84,-148.636	1/1:49:0,42,0,0,5:0:0:42,0,0,5:1350,0,0,135:-110.642,-12.6433,0,-110.642,-12.6433,-110.642,-110.642,-12.6433,-110.642,-110.642,-101.355,-3.42009,-101.355,-101.355,-99.8498	1/2:52:0,24,21,0,5:0:0:24,21,0,5:814,630,0,140:-104.91,-44.6936,-37.4689,-60.23,0,-53.9084,-104.91,-44.6936,-60.23,-104.91,-95.1723,-34.9561,-50.4983,-95.1723,-93.6671	1/4:60:0,48,0,0,9:0:0:48,0,0,9:1613,0,0,252:-137.056,-17.4861,-3.03669,-137.056,-17.4861,-137.056,-137.056,-17.4861,-137.056,-137.056,-119.53,0,-119.53,-119.53,-116.821	1/1:60:0,55,0,0,0:0:0:55,0,0,0:1903,0,0,0:-160.376,-16.5567,0,-160.376,-16.5567,-160.376,-160.376,-16.5567,-160.376,-160.376,-160.376,-16.5567,-160.376,-160.376,-160.376	1/4:61:0,49,0,0,11:0:0:49,0,0,11:1554,0,0,297:-133.138,-20.3724,-5.62195,-133.138,-20.3724,-133.138,-133.138,-20.3724,-133.138,-133.138,-112.705,0,-112.705,-112.705,-109.393	1/2:42:0,17,23,0,0:0:0:17,23,0,0:600,621,0,0:-88.0734,-42.6774,-37.5599,-45.3777,0,-38.454,-88.0734,-42.6774,-45.3777,-88.0734,-88.0734,-42.6774,-45.3777,-88.0734,-88.0734	1/1:53:0,44,0,0,6:0:0:44,0,0,6:1473,0,0,168:-121.846,-13.2453,0,-121.846,-13.2453,-121.846,-121.846,-13.2453,-121.846,-121.846,-110.163,-1.60391,-110.163,-110.163,-108.357	1/4:51:0,42,0,0,7:0:0:42,0,0,7:1454,0,0,189:-120.485,-13.1488,-0.505504,-120.485,-13.1488,-120.485,-120.485,-13.1488,-120.485,-120.485,-107.287,0,-107.287,-107.287,-105.179	1/2:32:0,22,7,0,3:0:0:22,7,0,3:748,205,0,84:-69.8949,-14.4571,-7.83443,-55.4562,0,-53.3489,-69.8949,-14.4571,-55.4562,-69.8949,-64.0546,-8.61588,-49.6187,-64.0546,-63.1515	1/2:192:0,76,96,0,12:0:0:76,96,0,12:2453,2590,0,312:-356.544,-178.223,-155.345,-178.336,0,-149.437,-356.544,-178.223,-178.336,-356.544,-334.957,-156.636,-156.755,-334.957,-331.345	1/2:92:0,50,38,0,0:0:0:50,38,0,0:1735,1024,0,0:-200.971,-70.5856,-55.5341,-130.345,0,-118.906,-200.971,-70.5856,-130.345,-200.971,-200.971,-70.5856,-130.345,-200.971,-200.971	1/1:131:0,109,0,0,13:0:0:109,0,0,13:3685,0,0,351:-319.807,-32.8123,0,-319.807,-32.8123,-319.807,-319.807,-32.8123,-319.807,-319.807,-295.656,-8.70754,-295.656,-295.656,-291.743	1/2:106:0,46,49,0,9:0:0:46,49,0,9:1493,1321,0,238:-199.597,-90.8673,-77.0199,-108.737,0,-93.9863,-199.597,-90.8673,-108.737,-199.597,-183.141,-74.409,-92.2872,-183.141,-180.431	1/1:41:0,40,0,0,0:0:0:40,0,0,0:1365,0,0,0:-115.08,-12.0412,0,-1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chr10	13229788	.	CTTAA	GTTAA,GTTAC	167074	PASS	AB=0.556926,0.440243;ABP=142.199,156.388;AC=136,52;AF=0.723404,0.276596;AN=188;AO=7960,2186;CIGAR=1X4M,1X3M1X;DP=10164;DPB=10164;DPRA=0,0.929648;EPP=17287.9,4749.85;EPPR=0;GTI=7;LEN=1,5;MEANALT=1.76596,2.21053;MQM=35.166,27.6953;MQMR=0;NS=94;NUMALT=2;ODDS=1.63264;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=266429,77660;QR=0;RO=0;RPL=7960,2186;RPP=17287.9,4749.85;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=17287.9,4749.85;SAR=7960,2186;SRF=0;SRP=0;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:24:0,13,11:0:0:13,11:439,384:-57.9684,-25.8836,-21.9702,-32.384,0,-29.0726	1/1:140:0,138,1:0:0:138,1:4610,35:-379.268,-41.5421,0,-376.976,-39.2664,-376.675	1/1:178:0,178,0:0:0:178,0:6009,0:-494.144,-53.5833,0,-494.144,-53.5833,-494.144	1/2:204:0,102,101:0:0:102,101:3296,3600:-446.204,-207.71,-177.005,-238.514,0,-208.109	1/2:91:0,43,47:0:0:43,47:1510,1680:-212.079,-98.6605,-85.7162,-113.552,0,-99.4039	1/2:75:0,36,39:0:0:36,39:1211,1375:-177.84,-89.3156,-78.4785,-88.8221,0,-77.0819	1/2:150:0,81,69:0:0:81,69:2592,2447:-330.406,-142.761,-118.377,-187.921,0,-167.15	1/1:169:0,168,1:0:0:168,1:5635,36:-463.001,-50.573,0,-460.69,-47.9713,-460.389	1/2:114:0,78,34:0:0:78,34:2487,1198:-256.706,-76.3393,-52.859,-180.475,0,-170.24	1/2:85:0,55,30:0:0:55,30:1737,1072:-187.815,-62.6489,-46.0923,-125.438,0,-116.407	1/1:61:0,61,0:0:0:61,0:1971,0:-162.861,-18.3628,0,-162.861,-18.3628,-162.861	1/2:53:0,32,21:0:0:32,21:1069,753:-127.07,-48.7712,-39.1382,-78.5949,0,-72.2733	1/1:71:0,71,0:0:0:71,0:2385,0:-196.216,-21.3731,0,-196.216,-21.3731,-196.216	1/1:79:0,79,0:0:0:79,0:2766,0:-232.892,-23.7814,0,-232.892,-23.7814,-232.892	1/1:68:0,68,0:0:0:68,0:2134,0:-174.261,-20.47,0,-174.261,-20.47,-174.261	1/2:46:0,23,23:0:0:23,23:815,824:-110.166,-48.1224,-41.1987,-62.3428,0,-55.4191	1/1:58:0,58,0:0:0:58,0:1923,0:-158.155,-17.4597,0,-158.155,-17.4597,-158.155	1/1:56:0,56,0:0:0:56,0:1890,0:-155.466,-16.8577,0,-155.466,-16.8577,-155.466	1/2:33:0,26,7:0:0:26,7:885,249:-80.8028,-15.9997,-8.17292,-65.0918,0,-62.9846	1/2:213:0,110,103:0:0:110,103:3524,3677:-466.588,-211.846,-178.732,-255.018,0,-224.012	1/2:107:0,66,41:0:0:66,41:2318,1432:-259.769,-84.5832,-64.7152,-175.473,0,-163.131	1/1:150:0,150,0:0:0:150,0:5062,0:-432.576,-45.1545,0,-432.576,-45.1545,-432.576	1/2:119:0,66,53:0:0:66,53:2104,1871:-260.858,-108.952,-89.0837,-152.18,0,-136.226	1/1:50:0,50,0:0:0:50,0:1753,0:-147.406,-15.0515,0,-147.406,-15.0515,-147.406	1/2:147:0,93,54:0:0:93,54:3270,1924:-358.241,-112.385,-84.3896,-246.143,0,-229.887	1/1:405:0,405,0:0:0:405,0:14009,0:-1205.54,-121.917,0,-1205.54,-121.917,-1205.54	1/2:289:0,159,128:0:0:159,128:5581,4541:-686.61,-264.935,-217.071,-421.754,0,-383.222	1/2:19:0,14,5:0:0:14,5:500,180:-49.3424,-11.5342,-7.31974,-38.1048,0,-36.5997	1/1:385:0,384,0:0:0:384,0:13326,0:-1145.78,-115.596,0,-1145.78,-115.596,-1145.78	1/2:149:0,72,77:0:0:72,77:2546,2740:-353.326,-160.658,-138.984,-192.967,0,-169.788	1/1:125:0,125,0:0:0:125,0:3981,0:-325.615,-37.6288,0,-325.615,-37.6288,-325.615	1/1:8:0,8,0:0:0:8,0:281,0:-23.7453,-2.40824,0,-23.7453,-2.40824,-23.7453	1/2:25:0,17,8:0:0:17,8:600,286:-62.5975,-17.0438,-11.9263,-45.8408,0,-43.4325	1/1:5:0,5,0:0:0:5,0:170,0:-14.3703,-1.50515,0,-14.3703,-1.50515,-14.3703	1/1:14:0,14,0:0:0:14,0:477,0:-39.5618,-4.21442,0,-39.5618,-4.21442,-39.5618	1/2:24:0,12,11:0:0:12,11:377,389:-52.4238,-25.2768,-21.6644,-27.1578,0,-23.8465	1/1:206:0,206,0:0:0:206,0:7037,0:-604.977,-62.0122,0,-604.977,-62.0122,-604.977	1/2:234:0,124,110:0:0:124,110:4356,3886:-558.03,-229.154,-191.826,-329.171,0,-296.057	1/2:68:0,46,22:0:0:46,22:1544,790:-164.672,-51.1026,-37.2552,-113.866,0,-107.243	1/2:9:0,5,4:0:0:5,4:167,143:-21.0282,-8.58425,-7.0791,-12.7284,0,-11.5243	1/1:146:0,145,1:0:0:145,1:5091,36:-426.092,-43.6494,0,-424.01,-41.3018,-423.709	1/1:37:0,37,0:0:0:37,0:1304,0:-110.154,-11.1381,0,-110.154,-11.1381,-110.154	1/2:75:0,38,37:0:0:38,37:1345,1309:-174.75,-73.4132,-61.974,-101.628,0,-90.4901	1/2:82:0,55,27:0:0:55,27:1787,964:-182.162,-52.2114,-35.6547,-130.214,0,-122.086	1/1:64:0,64,0:0:0:64,0:2059,0:-168.722,-19.2659,0,-168.722,-19.2659,-168.722	1/2:113:0,63,50:0:0:63,50:2167,1783:-271.451,-104.228,-85.2633,-167.516,0,-152.464	1/1:248:0,248,0:0:0:248,0:8452,0:-694.762,-74.6554,0,-694.762,-74.6554,-694.762	1/1:215:0,213,2:0:0:213,2:6843,72:-560.169,-64.1194,0,-556.004,-59.6891,-555.402	1/2:136:0,72,64:0:0:72,64:2280,2280:-297.161,-133.117,-111.443,-164.319,0,-145.053	1/2:166:0,103,63:0:0:103,63:3335,2244:-372.748,-130.442,-99.4361,-242.581,0,-223.616	1/2:99:0,63,36:0:0:63,36:2164,1281:-242.434,-75.7337,-56.7688,-166.989,0,-156.152	1/2:10:0,6,4:0:0:6,4:186,126:-21.3272,-7.95555,-6.14937,-13.6325,0,-12.4284	1/2:187:0,93,94:0:0:93,94:3074,3336:-437.584,-213.984,-185.988,-223.893,0,-195.597	1/2:70:0,36,34:0:0:36,34:1228,1214:-164.273,-69.8301,-58.993,-94.7346,0,-84.4995	1/1:24:0,24,0:0:0:24,0:783,0:-64.594,-7.22472,0,-64.594,-7.22472,-64.594	1/1:202:0,202,0:0:0:202,0:7104,0:-599.222,-60.8081,0,-599.222,-60.8081,-599.222	1/2:63:0,35,28:0:0:35,28:1132,994:-137.651,-55.51,-44.974,-82.4123,0,-73.9834	1/1:5:0,5,0:0:0:5,0:180,0:-16.0112,-1.50515,0,-16.0112,-1.50515,-16.0112	1/2:22:0,16,6:0:0:16,6:537,204:-53.3901,-12.5324,-7.71594,-41.1337,0,-39.3275	1/2:111:0,57,53:0:0:57,53:2020,1898:-261.251,-107.619,-90.4599,-153.661,0,-137.706	1/1:87:0,87,0:0:0:87,0:2800,0:-229.567,-26.1896,0,-229.567,-26.1896,-229.567	1/2:15:0,6,9:0:0:6,9:196,311:-33.0149,-18.7922,-16.986,-14.5055,0,-11.7962	1/2:218:0,124,94:0:0:124,94:4306,3334:-528.818,-194.856,-157.529,-334.255,0,-305.959	1/1:221:0,221,0:0:0:221,0:7082,0:-579.375,-66.5276,0,-579.375,-66.5276,-579.375	1/2:80:0,49,28:0:0:49,28:1689,1006:-185.011,-57.8048,-43.0543,-127.317,0,-118.888	1/1:129:0,129,0:0:0:129,0:4117,0:-336.709,-38.8329,0,-336.709,-38.8329,-336.709	1/2:168:0,90,78:0:0:90,78:2865,2774:-368.821,-161.689,-134.597,-207.407,0,-183.927	1/1:91:0,91,0:0:0:91,0:2935,0:-240.509,-27.3937,0,-240.509,-27.3937,-240.509	1/2:20:0,15,5:0:0:15,5:492,179:-47.3461,-10.5037,-5.98828,-37.1147,0,-35.6095	1/2:51:0,32,19:0:0:32,19:1065,682:-121.334,-43.7736,-34.1406,-77.8539,0,-72.1344	1/1:73:0,73,0:0:0:73,0:2515,0:-216.158,-21.9752,0,-216.158,-21.9752,-216.158	1/1:24:0,24,0:0:0:24,0:765,0:-62.7252,-7.22472,0,-62.7252,-7.22472,-62.7252	1/1:132:0,131,0:0:0:131,0:4335,0:-356.192,-39.4349,0,-356.192,-39.4349,-356.192	1/1:57:0,56,0:0:0:56,0:1850,0:-151.806,-16.8577,0,-151.806,-16.8577,-151.806	1/1:237:0,237,0:0:0:237,0:8314,0:-699.465,-71.3441,0,-699.465,-71.3441,-699.465	1/1:176:0,176,0:0:0:176,0:5675,0:-464.436,-52.9813,0,-464.436,-52.9813,-464.436	1/2:173:0,94,78:0:0:94,78:3202,2761:-413.385,-178.635,-150.338,-234.868,0,-211.387	1/2:95:0,58,36:0:0:58,36:1932,1271:-222.899,-81.9618,-64.5021,-140.93,0,-130.093	1/2:12:0,6,6:0:0:6,6:207,215:-29.3501,-14.1389,-12.3327,-15.5136,0,-13.7074	1/2:134:0,61,73:0:0:61,73:2123,2589:-311.64,-151.642,-133.279,-160.294,0,-138.319	1/2:113:0,55,58:0:0:55,58:1821,2061:-266.279,-133.609,-117.052,-132.966,0,-115.506	1/1:370:0,366,4:0:0:366,4:11808,142:-965.319,-110.177,0,-957.011,-101.604,-955.806	1/1:128:0,128,0:0:0:128,0:4090,0:-334.247,-38.5318,0,-334.247,-38.5318,-334.247	1/1:49:0,49,0:0:0:49,0:1557,0:-127.446,-14.7505,0,-127.446,-14.7505,-127.446	1/1:57:0,57,0:0:0:57,0:1828,0:-149.855,-17.1587,0,-149.855,-17.1587,-149.855	1/2:107:0,64,43:0:0:64,43:2047,1526:-237.076,-89.4256,-70.1597,-147.924,0,-134.98	1/2:36:0,19,17:0:0:19,17:651,607:-86.1784,-38.4383,-32.7187,-48.037,0,-42.9194	1/2:63:0,36,27:0:0:36,27:1212,971:-151.295,-62.6798,-51.8427,-88.9122,0,-80.7844	1/2:66:0,37,29:0:0:37,29:1232,1034:-156.592,-66.6375,-55.4994,-90.2495,0,-81.5197	1/2:28:0,21,7:0:0:21,7:748,251:-71.6316,-15.0561,-8.73447,-56.8598,0,-54.7526	1/2:91:0,51,40:0:0:51,40:1782,1415:-217.387,-83.6196,-68.2671,-134.059,0,-122.017	1/2:63:0,26,36:0:0:26,36:825,1278:-134.911,-75.2109,-67.3842,-59.8133,0,-48.9763	1/1:122:0,122,0:0:0:122,0:3853,0:-314.543,-36.7257,0,-314.543,-36.7257,-314.543	1/1:97:0,97,0:0:0:97,0:3092,0:-253.176,-29.1999,0,-253.176,-29.1999,-253.176
chr10	13288465	.	A	G	186991	PASS	AB=0.684063;ABP=944.672;AC=143;AF=0.760638;AN=188;AO=7110;CIGAR=1X;DP=8151;DPB=8151;DPRA=0;EPP=3397.82;EPPR=37.2193;GTI=1;LEN=1;MEANALT=1.01064;MQM=59.9958;MQMR=60;NS=94;NUMALT=1;ODDS=0.327349;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=253140;QR=37186;RO=1040;RPL=0;RPP=15442.2;RPPR=2261.34;RPR=7110;RUN=1;SAF=5222;SAP=3397.82;SAR=1888;SRF=584;SRP=37.2193;SRR=456;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:19:11,8:11:396:8:284:-20.1838,0,-30.2632	1/1:38:1,37:1:36:37:1324:-115.864,-7.84087,0	1/1:46:0,46:0:0:46:1648:-148.609,-13.8474,0	0/1:56:27,29:27:972:29:1027:-75.8845,0,-70.9402	0/1:15:9,6:9:316:6:212:-14.9093,0,-24.2634	0/1:15:7,8:7:248:8:288:-21.752,0,-18.1487	0/1:38:19,19:19:684:19:675:-49.6378,0,-50.4512	1/1:35:0,35:0:0:35:1237:-111.632,-10.5361,0	0/1:28:18,10:18:648:10:356:-23.9524,0,-50.223	0/1:31:14,17:14:504:17:608:-45.7201,0,-36.3662	1/1:412:0,412:0:0:412:14740:-1326.34,-124.024,0	0/1:95:47,48:47:1688:48:1687:-123.516,0,-123.609	1/1:102:0,102:0:0:102:3660:-329.603,-30.7051,0	1/1:117:0,117:0:0:117:4154:-374.047,-35.2205,0	1/1:49:0,49:0:0:49:1764:-159.044,-14.7505,0	0/1:84:45,39:45:1599:39:1364:-97.7691,0,-118.913	1/1:97:1,96:1:36:96:3407:-303.245,-25.6016,0	1/1:62:1,61:1:36:61:2144:-189.628,-15.0656,0	0/1:124:24,100:24:852:100:3571:-284.27,0,-39.6727	0/1:47:25,22:25:900:22:788:-57.0964,0,-67.1726	0/1:48:22,26:22:779:26:932:-69.7494,0,-55.9826	1/1:21:0,21:0:0:21:748:-67.6453,-6.32163,0	0/1:14:9,5:9:324:5:180:-12.3376,0,-25.2914	1/1:30:2,28:2:68:28:995:-83.4063,-2.57319,0	0/1:16:6,10:6:216:10:356:-27.5648,0,-14.974	1/1:69:0,69:0:0:69:2472:-222.734,-20.7711,0	0/1:65:24,41:24:864:41:1446:-110.867,0,-58.5156	0/1:41:20,21:20:720:21:737:-54.3084,0,-52.7865	1/1:62:0,62:0:0:62:2207:-198.895,-18.6639,0	0/1:31:13,18:13:468:18:640:-48.5974,0,-33.1277	1/1:35:0,35:0:0:35:1248:-112.625,-10.5361,0	1/1:184:0,184:0:0:184:6567:-591.11,-55.3895,0	1/1:121:7,114:7:252:114:4045:-341.208,-13.3957,0	1/1:286:0,286:0:0:286:10195:-917.481,-86.0946,0	1/1:376:0,376:0:0:376:13364:-1202.55,-113.187,0	1/1:156:3,153:3:108:153:5433:-479.026,-36.8855,0	1/1:176:0,176:0:0:176:6269:-564.306,-52.9813,0	0/1:26:15,11:15:540:11:392:-27.7933,0,-41.1098	0/1:182:30,152:30:1080:152:5430:-434.041,0,-42.7258	1/1:40:0,40:0:0:40:1436:-129.538,-12.0412,0	1/1:38:1,37:1:36:37:1323:-115.773,-7.84087,0	1/1:207:1,206:1:36:206:7360:-658.851,-58.7149,0	0/1:59:23,36:23:811:36:1288:-98.4628,0,-55.5492	0/1:81:35,46:35:1256:46:1604:-120.262,0,-88.9619	1/1:71:0,71:0:0:71:2508:-225.971,-21.3731,0	0/1:31:12,19:12:428:19:676:-51.8361,0,-29.5269	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	1/1:49:1,48:1:36:48:1693:-149.056,-11.1522,0	0/1:29:18,11:18:644:11:396:-27.2529,0,-49.5607	0/1:46:23,23:23:828:23:828:-60.9967,0,-60.9967	0/1:37:16,21:16:568:21:748:-56.5072,0,-40.3138	1/1:130:0,130:0:0:130:4656:-419.201,-39.1339,0	0/1:38:18,20:18:644:20:720:-53.6896,0,-46.8515	0/1:10:5,5:5:180:5:176:-13.1747,0,-13.5418	1/1:98:0,98:0:0:98:3488:-314.13,-29.5009,0	1/1:36:0,36:0:0:36:1264:-114.06,-10.8371,0	0/1:13:7,6:7:252:6:212:-15.5114,0,-19.1156	1/1:248:1,247:1:36:247:8818:-790.006,-71.0572,0	1/1:90:2,88:2:68:88:3120:-274.569,-20.635,0	0/1:27:11,16:11:392:16:576:-44.0472,0,-27.4922	1/1:116:2,114:2:72:114:4043:-357.224,-28.0828,0	1/1:78:2,76:2:72:76:2709:-237.216,-16.6436,0	0/1:31:11,20:11:396:20:698:-53.8095,0,-26.6508	1/1:47:0,47:0:0:47:1676:-151.125,-14.1484,0	0/1:21:11,10:11:392:10:352:-25.6966,0,-29.2984	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	0/1:50:22,28:22:769:28:1000:-75.2639,0,-54.4771	1/1:32:0,32:0:0:32:1125:-101.556,-9.63296,0	0/1:347:46,301:46:1656:301:10783:-865.914,0,-44.871	0/1:21:13,8:13:464:8:288:-19.9458,0,-35.7759	1/1:109:0,109:0:0:109:3895:-350.744,-32.8123,0	1/1:193:0,193:0:0:193:6870:-618.37,-58.0988,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:27:0,27:0:0:27:947:-85.5438,-8.12781,0	1/1:38:0,38:0:0:38:1346:-121.439,-11.4391,0	1/1:44:0,44:0:0:44:1550:-139.789,-13.2453,0	0/1:37:20,17:20:705:17:604:-43.5525,0,-52.6347	0/1:32:9,23:9:324:23:805:-63.1345,0,-19.8729	1/1:107:1,106:1:36:106:3804:-338.959,-28.6119,0	0/1:51:23,28:23:824:28:994:-74.4219,0,-59.1308	0/1:25:13,12:13:459:12:419:-30.5169,0,-34.1183	1/1:72:0,72:0:0:72:2526:-227.591,-21.6742,0	1/1:117:0,117:0:0:117:4151:-373.776,-35.2205,0	1/1:110:0,110:0:0:110:3900:-351.195,-33.1133,0	1/1:90:0,89:0:0:89:3157:-283.995,-26.7917,0	0/1:111:56,55:56:2008:55:1941:-141.55,0,-147.579	0/1:41:21,20:21:752:20:696:-50.6174,0,-55.664	0/1:66:28,38:28:1000:38:1352:-102.112,0,-70.4474	0/1:67:33,34:33:1180:34:1207:-88.7663,0,-86.339	0/1:313:40,273:40:1428:273:9762:-784.305,0,-34.5951	0/1:525:50,475:50:1787:475:16915:-1363.96,0,-3.07115	0/1:116:62,54:62:2205:54:1924:-138.517,0,-163.794	1/1:99:0,99:0:0:99:3510:-316.11,-29.802,0	1/1:134:3,131:3:108:131:4655:-409.024,-30.2629,0
chr10	13288501	.	A	C	185742	PASS	AB=0.678076;ABP=896.257;AC=143;AF=0.760638;AN=188;AO=7076;CIGAR=1X;DP=8151;DPB=8151;DPRA=0;EPP=3236.44;EPPR=32.6399;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.9869;MQMR=60;NS=94;NUMALT=1;ODDS=1.30752;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=250363;QR=38371;RO=1073;RPL=7044;RPP=15091.7;RPPR=2238.43;RPR=32;RUN=1;SAF=5131;SAP=3118.01;SAR=1945;SRF=588;SRP=24.4802;SRR=485;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:19:11,8:11:392:8:284:-20.1838,0,-29.9005	1/1:39:1,38:1:36:38:1340:-117.299,-8.1419,0	1/1:46:0,46:0:0:46:1635:-147.429,-13.8474,0	0/1:54:26,28:26:928:28:1008:-74.7807,0,-67.5826	0/1:14:9,5:9:320:5:176:-11.9706,0,-24.9279	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	0/1:40:21,19:21:737:19:669:-48.4927,0,-54.6094	1/1:34:0,34:0:0:34:1201:-108.394,-10.235,0	0/1:28:18,10:18:640:10:356:-23.9524,0,-49.5005	0/1:34:14,20:14:504:20:705:-53.5372,0,-35.4631	1/1:407:0,407:0:0:407:14379:-1293.88,-122.519,0	0/1:100:53,47:53:1895:47:1684:-121.744,0,-140.724	1/1:103:0,103:0:0:103:3660:-329.604,-31.0061,0	1/1:119:0,119:0:0:119:4215:-379.53,-35.8226,0	1/1:50:0,50:0:0:50:1785:-160.931,-15.0515,0	0/1:86:47,39:47:1672:39:1380:-98.6074,0,-124.879	1/1:101:0,101:0:0:101:3611:-325.196,-30.404,0	1/1:61:0,61:0:0:61:2149:-193.674,-18.3628,0	0/1:125:25,100:25:887:100:3554:-282.44,0,-42.5194	0/1:47:25,22:25:896:22:783:-56.6445,0,-66.8119	0/1:51:22,28:22:788:28:1000:-74.9427,0,-55.8717	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	1/1:29:2,27:2:72:27:968:-80.6006,-1.89315,0	0/1:17:6,11:6:216:11:374:-28.8689,0,-14.673	1/1:68:0,68:0:0:68:2418:-217.875,-20.47,0	0/1:66:24,42:24:860:42:1467:-112.453,0,-57.8539	0/1:43:22,21:22:792:21:737:-53.7063,0,-58.6614	1/1:63:0,63:0:0:63:2245:-202.313,-18.9649,0	0/1:30:14,16:14:500:16:576:-43.1441,0,-36.3053	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	1/1:186:1,185:1:36:185:6527:-583.921,-52.3933,0	1/1:117:7,110:7:248:110:3912:-329.608,-12.5563,0	1/1:274:0,274:0:0:274:9666:-869.904,-82.4822,0	1/1:361:0,361:0:0:361:12667:-1139.86,-108.672,0	1/1:154:4,150:4:140:150:5354:-469.049,-33.414,0	1/1:177:0,177:0:0:177:6313:-568.263,-53.2823,0	0/1:26:15,11:15:540:11:377:-26.4297,0,-41.1098	0/1:181:31,150:31:1116:150:5328:-425.17,0,-46.2653	1/1:40:0,40:0:0:40:1395:-125.845,-12.0412,0	1/1:39:1,38:1:36:38:1364:-119.462,-8.1419,0	1/1:200:0,200:0:0:200:7021:-631.961,-60.206,0	0/1:60:24,36:24:856:36:1278:-97.2611,0,-59.2993	0/1:82:36,46:36:1296:46:1639:-123.113,0,-92.2595	1/1:74:0,74:0:0:74:2615:-235.594,-22.2762,0	0/1:32:13,19:13:460:19:676:-51.535,0,-32.1024	1/1:22:0,22:0:0:22:783:-70.7929,-6.62266,0	1/1:49:1,48:1:36:48:1708:-150.405,-11.1522,0	0/1:30:18,12:18:644:12:428:-29.8279,0,-49.2597	0/1:47:24,23:24:860:23:818:-59.7928,0,-63.5734	0/1:38:17,21:17:612:21:748:-56.2062,0,-43.9743	1/1:130:0,130:0:0:130:4587:-412.998,-39.1339,0	0/1:39:18,21:18:644:21:756:-56.6271,0,-46.5504	0/1:10:5,5:5:180:5:180:-13.5418,0,-13.5418	1/1:94:0,94:0:0:94:3307:-297.848,-28.2968,0	1/1:35:0,35:0:0:35:1220:-110.101,-10.5361,0	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	1/1:240:2,238:2:68:238:8334:-743.621,-65.7895,0	1/1:85:3,82:3:104:82:2923:-253.602,-15.8847,0	0/1:28:11,17:11:381:17:604:-46.2618,0,-26.1918	1/1:119:2,117:2:72:117:4143:-366.215,-28.9858,0	1/1:81:2,79:2:72:79:2801:-245.304,-17.5467,0	0/1:36:12,24:12:428:24:856:-66.524,0,-28.0217	1/1:48:0,48:0:0:48:1700:-153.284,-14.4494,0	0/1:20:10,10:10:360:10:360:-26.7237,0,-26.7237	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	0/1:50:22,28:22:784:28:992:-74.5429,0,-55.8324	1/1:32:0,32:0:0:32:1119:-101.015,-9.63296,0	0/1:344:47,297:47:1671:297:10437:-835.712,0,-47.1222	0/1:21:13,8:13:464:8:288:-19.9458,0,-35.7759	1/1:111:0,111:0:0:111:3950:-355.693,-33.4143,0	1/1:191:0,191:0:0:191:6709:-603.896,-57.4967,0	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	1/1:25:0,25:0:0:25:885:-79.9665,-7.52575,0	1/1:39:0,39:0:0:39:1395:-125.848,-11.7402,0	1/1:44:0,44:0:0:44:1547:-139.518,-13.2453,0	0/1:39:21,18:21:737:18:633:-45.5558,0,-54.9105	0/1:32:9,23:9:324:23:820:-64.4896,0,-19.8729	1/1:110:1,109:1:36:109:3803:-338.871,-29.515,0	0/1:52:24,28:24:860:28:980:-72.8566,0,-62.0683	0/1:25:13,12:13:464:12:428:-31.3331,0,-34.5718	1/1:71:1,70:1:36:70:2478:-219.673,-17.7749,0	1/1:118:0,118:0:0:118:4219:-379.89,-35.5215,0	1/1:108:0,108:0:0:108:3847:-346.427,-32.5112,0	1/1:89:0,89:0:0:89:3196:-287.863,-26.7917,0	0/1:116:57,59:57:2052:59:2065:-151.198,0,-150.032	0/1:42:22,20:22:792:20:720:-52.4855,0,-58.9624	0/1:68:31,37:31:1116:37:1328:-99.3522,0,-80.2817	0/1:68:34,34:34:1216:34:1185:-86.4799,0,-89.2765	0/1:317:41,275:41:1468:275:9680:-775.676,0,-36.9308	0/1:527:53,474:53:1899:474:16756:-1349.07,0,-12.5444	0/1:116:61,55:61:2192:55:1934:-139.416,0,-162.626	1/1:100:0,100:0:0:100:3555:-320.158,-30.103,0	1/1:135:3,132:3:108:132:4727:-415.499,-30.5639,0
chr10	14163129	.	GA	TG,GT	280615	PASS	AB=0.410419,0.588056;ABP=871.359,842.044;AC=114,74;AF=0.606383,0.393617;AN=188;AO=6872,7350;CIGAR=2X,1M1X;DP=14248;DPB=14248.5;DPRA=0,2.50668;EPP=14925.4,15954.6;EPPR=7.35324;GTI=10;LEN=2,1;MEANALT=2.04255,2.23684;MQM=59.313,59.8864;MQMR=60;NS=94;NUMALT=2;ODDS=26376.6;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=32,0;PQR=0;PRO=0;QA=240823,258392;QR=61;RO=2;RPL=6872,7350;RPP=14925.4,15963.3;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=0,1;SAP=14925.4,15954.6;SAR=6872,7349;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:146:0,40,106:0:0:40,106:1411,3710:-416.992,-302.163,-290.122,-115.181,0,-83.2715	1/2:124:0,90,34:0:0:90,34:3182,1182:-355.554,-96.4455,-69.3528,-259.458,0,-249.223	1/2:293:0,189,103:0:0:189,103:6654,3634:-836.704,-295.88,-238.986,-540.818,0,-509.812	1/2:382:0,128,253:0:0:128,253:4525,8885:-1091.06,-723.218,-684.686,-367.944,0,-291.783	1/2:110:0,51,59:0:0:51,59:1791,2078:-315.019,-169.336,-153.984,-146.034,0,-128.273	1/2:135:0,39,96:0:0:39,96:1360,3368:-384.94,-274.351,-262.611,-110.938,0,-82.0393	1/2:197:0,69,128:0:0:69,128:2435,4478:-562.705,-364.43,-343.659,-198.626,0,-160.094	1/2:269:0,196,73:0:0:196,73:6861,2510:-761.42,-204.171,-145.169,-557.594,0,-535.619	1/2:224:0,68,155:0:0:68,155:2358,5450:-634.698,-443.609,-423.139,-191.077,0,-144.417	1/2:117:0,41,76:0:0:41,76:1425,2659:-331.899,-216.675,-204.333,-115.57,0,-92.6919	1/1:88:0,88,0:0:0:88,0:3092,0:-278.486,-26.4906,0,-278.486,-26.4906,-278.486	1/2:154:0,43,111:0:0:43,111:1520,3984:-448.448,-324.708,-311.764,-124.095,0,-90.6803	1/1:62:0,62,0:0:0:62,0:2177,0:-196.176,-18.6639,0,-196.176,-18.6639,-196.176	1/1:61:0,60,0:0:0:60,0:2089,0:-188,-18.0618,0,-188,-18.0618,-188	1/1:52:0,52,0:0:0:52,0:1849,0:-166.663,-15.6536,0,-166.663,-15.6536,-166.663	1/2:110:0,44,66:0:0:44,66:1546,2352:-317.869,-192.067,-178.821,-126.156,0,-106.288	1/1:40:0,40,0:0:0:40,0:1390,0:-125.385,-12.0412,0,-125.385,-12.0412,-125.385	1/1:26:0,26,0:0:0:26,0:923,0:-83.1715,-7.82678,0,-83.1715,-7.82678,-83.1715	1/2:63:0,12,51:0:0:12,51:410,1812:-181.277,-148.009,-144.397,-33.6124,0,-18.2599	1/2:245:0,53,192:0:0:53,192:1851,6781:-703.12,-552.565,-536.611,-150.904,0,-93.1064	1/2:374:0,99,273:0:0:99,273:3471,9614:-1064.66,-782.651,-752.849,-282.023,0,-199.842	1/2:155:0,100,55:0:0:100,55:3478,1968:-443.565,-160.838,-130.735,-283.081,0,-266.524	1/2:211:0,64,147:0:0:64,147:2239,5091:-595.598,-413.457,-394.191,-182.49,0,-138.238	1/2:83:0,66,17:0:0:66,17:2330,589:-237.943,-48.2158,-28.3478,-190.075,0,-184.957	1/2:191:0,58,133:0:0:58,133:2025,4657:-543.881,-379.257,-361.797,-164.974,0,-124.937	1/2:395:0,270,124:0:0:270,124:9383,4262:-1107.66,-345.051,-263.773,-762.591,0,-725.263	1/2:464:0,171,292:0:0:171,292:5973,10334:-1327.42,-841.802,-790.326,-485.688,0,-397.787	1/2:37:0,15,22:0:0:15,22:538,780:-107.775,-63.9004,-59.3849,-44.2311,0,-37.6084	1/2:415:0,269,145:0:0:269,145:9423,5064:-1177.11,-411.893,-330.915,-765.207,0,-721.558	1/2:229:0,65,164:0:0:65,164:2272,5690:-647.27,-462.481,-442.914,-185.137,0,-135.768	1/1:136:0,136,0:0:0:136,0:4738,0:-426.302,-40.9401,0,-426.302,-40.9401,-426.302	1/2:8:0,6,2:0:0:6,2:212,68:-23.1313,-5.85565,-4.04947,-17.6188,0,-17.0168	1/2:27:0,7,20:0:0:7,20:241,686:-75.6115,-56.0382,-53.931,-19.9171,0,-13.8965	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/2:19:0,10,9:0:0:10,9:358,313:-54.9959,-25.7958,-22.7855,-29.5526,0,-26.8433	1/2:29:0,10,19:0:0:10,19:356,672:-84.0791,-55.0873,-52.077,-29.3467,0,-23.6271	1/2:223:0,142,79:0:0:142,79:4994,2820:-635.841,-229.899,-187.152,-405.937,0,-382.156	1/2:230:0,69,160:0:0:69,160:2388,5589:-648.629,-454.605,-433.834,-194.011,0,-145.846	1/2:78:0,21,57:0:0:21,57:745,2017:-225.337,-164.642,-158.32,-61.0494,0,-43.8907	2/2:14:0,1,13:0:0:1,13:36,453:-40.7406,-37.8024,-37.5013,-3.91339,-0.616145,0	1/1:163:0,155,7:0:0:155,7:5375,244:-481.993,-46.6597,0,-462.149,-26.7524,-460.041	1/1:34:0,34,0:0:0:34,0:1189,0:-107.313,-10.235,0,-107.313,-10.235,-107.313	1/2:353:0,119,234:0:0:119,234:4135,8162:-1000.1,-664.156,-628.333,-336.294,0,-265.853	1/2:86:0,14,72:0:0:14,72:495,2538:-247.298,-206.984,-202.77,-40.6671,0,-18.993	1/2:82:0,51,31:0:0:51,31:1779,1103:-234.5,-90.2487,-74.8962,-144.604,0,-135.272	1/2:250:0,50,199:0:0:50,199:1741,6990:-710.553,-568.986,-553.934,-141.635,0,-81.7302	1/1:125:0,123,0:0:0:123,0:4323,0:-388.406,-37.0267,0,-388.406,-37.0267,-388.406	1/1:172:0,168,2:0:0:168,2:5828,72:-524.052,-50.573,0,-518.177,-44.6707,-517.575	1/2:197:0,90,107:0:0:90,107:3182,3763:-565.806,-306.658,-279.565,-259.501,0,-227.291	1/2:260:0,120,140:0:0:120,140:4179,4950:-742.901,-403.188,-367.065,-339.743,0,-297.599	1/2:256:0,60,195:0:0:60,195:2108,6842:-728.278,-556.765,-538.703,-171.583,0,-112.883	1/2:12:0,3,9:0:0:3,9:106,320:-35.0654,-26.4331,-25.53,-8.98601,0,-6.27674	1/2:257:0,75,180:0:0:75,180:2624,6348:-730.101,-516.862,-494.285,-213.229,0,-159.044	1/2:189:0,62,127:0:0:62,127:2153,4469:-538.831,-363.822,-345.158,-175.357,0,-137.126	1/2:10:0,4,6:0:0:4,6:144,212:-29.3709,-17.6186,-16.4145,-12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chr10	17572749	.	C	T	35498.4	PASS	AB=0.454148;ABP=90.8269;AC=51;AF=0.271277;AN=188;AO=2213;CIGAR=1X;DP=10368;DPB=10368;DPRA=0.863271;EPP=4808.48;EPPR=17696.2;GTI=4;LEN=1;MEANALT=1.01786;MQM=59.9738;MQMR=59.9971;NS=94;NUMALT=1;ODDS=0.0830688;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=79105;QR=291201;RO=8152;RPL=0;RPP=4808.48;RPPR=17696.2;RPR=2213;RUN=1;SAF=0;SAP=4808.48;SAR=2213;SRF=0;SRP=17704.9;SRR=8152;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:58:33,25:33:1180:25:900:-63.8613,0,-89.0483	0/0:166:166,0:166:5925:0:0:0,-49.971,-533.359	0/0:215:214,0:214:7663:0:0:0,-64.4204,-689.345	0/1:207:101,106:101:3623:106:3816:-281.322,0,-263.961	0/1:46:35,11:35:1234:11:396:-22.1354,0,-97.5153	0/1:25:10,15:10:360:15:532:-40.6873,0,-25.2186	0/1:248:119,129:119:4248:129:4603:-339.779,0,-307.842	0/0:272:272,0:272:9722:0:0:0,-81.8802,-874.927	0/1:78:46,32:46:1647:32:1152:-80.5098,0,-125.037	0/1:112:66,46:66:2340:46:1652:-115.253,0,-177.142	0/0:40:40,0:40:1440:0:0:0,-12.0412,-129.898	0/1:104:57,47:57:1996:47:1670:-119.279,0,-148.602	0/0:80:80,0:80:2835:0:0:0,-24.0824,-255.387	0/0:72:72,0:72:2572:0:0:0,-21.6742,-231.73	0/0:80:80,0:80:2837:0:0:0,-24.0824,-255.568	0/1:59:28,31:28:996:31:1112:-82.6306,0,-72.1941	0/0:41:41,0:41:1464:0:0:0,-12.3422,-132.056	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/1:26:15,11:15:527:11:388:-27.4306,0,-39.9334	0/1:198:82,116:82:2948:116:4145:-313.629,0,-205.949	0/1:151:89,62:89:3172:62:2224:-154.969,0,-240.25	0/0:137:137,0:137:4916:0:0:0,-41.2411,-442.59	0/0:188:185,3:185:6606:3:108:0,-46.5185,-584.546	0/0:156:147,9:147:5232:9:324:0,-17.4548,-441.513	0/1:61:35,26:35:1256:26:932:-65.836,0,-94.9825	0/0:365:365,0:365:12995:0:0:0,-109.876,-1169.37	0/1:207:105,102:105:3744:102:3654:-266.75,0,-274.846	0/1:23:11,12:11:396:12:428:-31.9351,0,-29.0591	0/0:211:211,0:211:7564:0:0:0,-63.5173,-680.798	0/1:173:98,75:98:3497:75:2646:-186.247,0,-262.862	0/0:143:143,0:143:5123:0:0:0,-43.0473,-461.211	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/1:28:20,8:20:712:8:279:-17.0187,0,-55.9778	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/1:17:12,5:12:432:5:180:-11.4346,0,-34.1037	0/0:198:198,0:198:7066:0:0:0,-59.6039,-636	0/1:111:69,42:69:2463:42:1508:-102.6,0,-188.509	0/1:42:21,21:21:743:21:756:-55.724,0,-54.5501	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	0/0:157:156,1:156:5591:1:36:0,-43.6634,-499.486	0/0:45:45,0:45:1603:0:0:0,-13.5463,-144.559	0/1:128:101,27:101:3585:27:972:-49.2661,0,-284.326	0/1:55:33,22:33:1160:22:788:-54.6881,0,-88.1473	0/0:50:50,0:50:1787:0:0:0,-15.0515,-161.112	0/1:134:94,40:94:3338:40:1429:-88.5222,0,-260.3	0/0:117:117,0:117:4165:0:0:0,-35.2205,-375.03	0/0:164:163,1:163:5840:1:36:0,-45.7706,-522.113	0/1:109:47,62:47:1684:62:2224:-167.612,0,-119.035	0/1:212:116,96:116:4164:96:3448:-246.713,0,-311.123	0/1:180:122,58:122:4352:58:2061:-131.574,0,-337.668	0/1:6:4,2:4:140:2:72:-5.03054,0,-11.1384	0/1:119:61,58:61:2156:58:2075:-151.197,0,-158.483	0/1:153:96,57:96:3424:57:2052:-138.894,0,-262.315	0/0:19:19,0:19:676:0:0:0,-5.71957,-61.168	0/0:194:194,0:194:6939:0:0:0,-58.3998,-624.576	0/1:75:53,22:53:1895:22:788:-48.6675,0,-148.25	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:22:17,5:17:604:5:180:-9.9294,0,-48.0679	0/1:94:49,45:49:1756:45:1612:-117.073,0,-130.027	0/0:107:107,0:107:3797:0:0:0,-32.2102,-341.927	1/1:12:1,11:1:36:11:396:-32.3845,-0.0140851,0	0/1:195:95,100:95:3386:100:3557:-261.638,0,-246.254	0/0:270:270,0:270:9656:0:0:0,-81.2781,-868.99	0/1:150:79,71:79:2840:71:2535:-183.245,0,-210.683	0/0:294:294,0:294:10525:0:0:0,-88.5028,-947.163	0/1:161:73,88:73:2624:88:3152:-235.439,0,-187.941	0/0:180:176,3:176:6316:3:108:0,-44.169,-558.455	0/1:31:15,16:15:540:16:576:-42.8431,0,-39.6046	0/1:107:66,41:66:2364:41:1459:-99.3951,0,-180.808	0/0:63:63,0:63:2247:0:0:0,-18.9649,-202.493	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:109:109,0:109:3904:0:0:0,-32.8123,-351.553	0/0:89:89,0:89:3184:0:0:0,-26.7917,-286.784	0/0:161:161,0:161:5763:0:0:0,-48.4658,-518.785	0/0:139:138,1:138:4939:1:36:0,-38.2449,-441.061	0/1:70:42,28:42:1504:28:980:-67.4389,0,-114.582	0/1:120:72,48:72:2566:48:1720:-118.962,0,-195.065	0/1:18:16,2:16:572:2:72:-1.41818,0,-46.3949	0/0:159:159,0:159:5700:0:0:0,-47.8638,-513.117	0/1:188:83,105:83:2967:105:3723:-278.678,0,-210.669	0/0:299:299,0:299:10710:0:0:0,-90.008,-963.805	0/0:60:59,0:59:2079:0:0:0,-17.7608,-187.018	0/0:84:84,0:84:3016:0:0:0,-25.2865,-271.67	0/0:37:37,0:37:1304:0:0:0,-11.1381,-117.659	0/1:116:64,52:64:2270:52:1864:-133.12,0,-169.642	0/1:22:11,11:11:392:11:396:-29.3601,0,-28.9974	0/1:79:37,42:37:1316:42:1504:-111.873,0,-94.9604	0/1:73:30,43:30:1076:43:1540:-116.918,0,-75.1777	0/1:53:29,24:29:1032:24:864:-62.128,0,-77.2389	0/1:106:43,63:43:1548:63:2238:-169.774,0,-107.704	0/1:52:19,33:19:660:33:1171:-90.0431,0,-44.067	0/0:194:194,0:194:6935:0:0:0,-58.3998,-624.217	0/0:91:91,0:91:3268:0:0:0,-27.3937,-294.34
chr10	19099953	.	C	A	76282.4	PASS	AB=0.605948;ABP=212.828;AC=137;AF=0.728723;AN=188;AO=3618;CIGAR=1X;DP=4470;DPB=4470;DPRA=0;EPP=7859.4;EPPR=1712.4;GTI=6;LEN=1;MEANALT=1.02128;MQM=54.9516;MQMR=59.9682;NS=94;NUMALT=1;ODDS=1.46625;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129408;QR=30379;RO=850;RPL=0;RPP=7859.4;RPPR=1712.4;RPR=3618;RUN=1;SAF=0;SAP=7859.4;SAR=3618;SRF=0;SRP=1848.76;SRR=850;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:16:4,12:4:144:12:432:-34.2609,0,-8.49714	1/1:52:0,52:0:0:52:1868:-166.916,-15.6536,0	1/1:86:0,86:0:0:86:3083:-277.168,-25.8886,0	0/1:111:52,59:52:1853:59:2098:-155.453,0,-133.634	1/1:32:2,30:2:72:30:1076:-89.9302,-2.79624,0	1/1:18:1,17:1:36:17:608:-51.2927,-1.82027,0	0/1:30:19,11:19:680:11:396:-26.8414,0,-52.4983	1/1:88:0,88:0:0:88:3168:-285.05,-26.4906,0	0/1:53:17,36:17:608:36:1296:-100.864,0,-39.0974	0/1:40:27,13:27:972:13:468:-30.3855,0,-75.7283	1/1:32:0,32:0:0:32:1139:-102.747,-9.63296,0	0/1:59:24,35:24:847:35:1249:-94.4448,0,-58.788	1/1:48:0,48:0:0:48:1707:-153.619,-14.4494,0	1/1:31:0,31:0:0:31:1116:-100.615,-9.33193,0	1/1:49:0,49:0:0:49:1750:-157.645,-14.7505,0	0/1:32:14,18:14:504:18:648:-48.8102,0,-36.0651	1/1:20:0,19:0:0:19:684:-61.4671,-5.71957,0	1/1:13:0,13:0:0:13:464:-42.0558,-3.91339,0	0/1:13:9,4:9:324:4:135:-8.54379,0,-25.5925	0/1:45:15,30:15:540:30:1080:-83.8905,0,-35.3902	0/1:99:50,49:50:1792:49:1760:-128.229,0,-131.761	1/1:49:0,49:0:0:49:1764:-158.933,-14.7505,0	0/1:52:19,33:19:680:33:1188:-91.4792,0,-45.8694	0/1:27:4,23:4:144:23:828:-66.6114,0,-5.18581	0/1:27:3,24:3:108:24:855:-68.8654,0,-1.94736	1/1:116:0,116:0:0:116:4147:-373.173,-34.9195,0	0/1:82:38,44:38:1364:44:1556:-115.269,0,-98.3763	0/1:13:7,6:7:237:6:216:-15.8491,0,-17.7457	1/1:115:0,115:0:0:115:4117:-369.867,-34.6185,0	0/1:64:23,41:23:820:41:1453:-111.621,0,-54.8566	1/1:49:0,49:0:0:49:1749:-157.407,-14.7505,0	1/1:19:0,19:0:0:19:684:-61.8026,-5.71957,0	0/1:22:4,18:4:144:18:640:-51.1742,0,-6.69096	1/1:13:0,13:0:0:13:468:-42.3919,-3.91339,0	1/1:78:0,78:0:0:78:2772:-249.402,-23.4803,0	0/1:22:12,10:12:414:10:360:-25.9843,0,-30.9663	1/1:111:0,111:0:0:111:3975:-357.554,-33.4143,0	0/1:57:16,41:16:568:41:1456:-113.992,0,-34.2932	0/1:26:8,18:8:284:18:635:-49.58,0,-18.0766	0/1:10:3,7:3:108:7:248:-19.624,0,-7.06487	1/1:36:0,36:0:0:36:1292:-116.294,-10.8371,0	1/1:17:0,17:0:0:17:612:-55.3349,-5.11751,0	0/1:75:10,65:10:356:65:2306:-184.545,0,-9.804	0/1:34:15,19:15:525:19:684:-51.4971,0,-37.343	1/1:22:0,22:0:0:22:792:-71.5279,-6.62266,0	0/1:74:22,52:22:783:52:1864:-145.565,0,-48.5167	1/1:91:0,91:0:0:91:3259:-291.994,-27.3937,0	1/1:125:0,125:0:0:125:4470:-401.398,-37.6288,0	0/1:49:21,28:21:752:28:1004:-75.7749,0,-53.2558	0/1:58:31,27:31:1108:27:972:-70.1908,0,-82.5713	0/1:12:6,6:6:212:6:216:-16.1726,0,-15.8124	0/1:17:12,5:12:428:5:180:-11.4226,0,-33.7413	0/1:45:19,26:19:684:26:932:-70.5541,0,-48.344	0/1:19:9,10:9:324:10:356:-26.6531,0,-23.7863	1/1:14:0,14:0:0:14:504:-45.6367,-4.21442,0	1/1:58:0,58:0:0:58:2074:-186.23,-17.4597,0	0/1:9:4,5:4:144:5:171:-13.0063,0,-10.6043	1/1:15:0,15:0:0:15:536:-48.5617,-4.51545,0	0/1:24:9,15:9:324:15:525:-40.3405,0,-22.2811	0/1:24:4,20:4:144:20:716:-57.4534,0,-6.0889	1/1:63:0,63:0:0:63:2247:-202.118,-18.9649,0	0/1:11:2,9:2:72:9:324:-26.1732,0,-3.52539	0/1:102:49,53:49:1760:53:1908:-141.071,0,-127.979	1/1:62:0,62:0:0:62:2214:-199.281,-18.6639,0	0/1:37:18,19:18:648:19:684:-50.5389,0,-47.5138	1/1:35:0,35:0:0:35:1239:-111.484,-10.5361,0	0/1:93:36,56:36:1292:56:2016:-153.033,0,-88.69	1/1:37:0,37:0:0:37:1328:-119.639,-11.1381,0	0/1:19:11,8:11:392:8:279:-19.5682,0,-29.9005	0/1:22:11,11:11:396:11:383:-28.1479,0,-29.3601	1/1:30:0,30:0:0:30:1072:-96.5197,-9.0309,0	1/1:19:0,19:0:0:19:680:-61.4745,-5.71957,0	1/1:64:0,64:0:0:64:2271:-204.185,-19.2659,0	1/1:53:0,53:0:0:53:1904:-171.258,-15.9546,0	1/1:136:0,136:0:0:136:4880:-438.439,-40.9401,0	1/1:83:0,83:0:0:83:2976:-267.717,-24.9855,0	0/1:38:9,29:9:324:29:1036:-81.9188,0,-18.0667	0/1:68:29,39:29:1044:39:1404:-105.951,0,-73.8048	0/1:24:5,19:5:180:19:684:-53.9756,0,-9.32734	0/1:38:11,27:11:388:27:968:-75.6258,0,-23.8182	0/1:53:16,37:16:568:37:1319:-102.835,0,-35.4973	1/1:119:0,119:0:0:119:4276:-383.77,-35.8226,0	1/1:21:0,21:0:0:21:739:-66.7841,-6.32163,0	1/1:41:0,41:0:0:41:1476:-133.04,-12.3422,0	1/1:17:0,17:0:0:17:608:-55.0135,-5.11751,0	0/1:80:27,53:27:964:53:1896:-146.528,0,-62.9944	0/1:19:7,12:7:244:12:432:-33.3578,0,-16.5799	0/1:44:13,31:13:464:31:1101:-86.0392,0,-28.8522	0/1:44:18,26:18:648:26:923:-69.9226,0,-45.4066	0/1:12:6,6:6:212:6:212:-15.6053,0,-15.8124	0/1:70:28,42:28:1000:42:1480:-112.084,0,-69.2433	0/1:38:21,17:21:756:17:612:-43.7659,0,-56.9281	1/1:86:0,86:0:0:86:3088:-277.486,-25.8886,0	1/1:55:0,55:0:0:55:1948:-175.336,-16.5567,0
chr10	19099979	.	TTTGA	CTTTT,TTTTT	96283.3	PASS	AB=0.60542,0.391824;ABP=213.156,224.288;AC=137,51;AF=0.728723,0.271277;AN=188;AO=3669,857;CIGAR=1X2M2X,3M2X;DP=4533;DPB=4533;DPRA=0,0.780394;EPP=7970.14,1863.96;EPPR=0;GTI=6;LEN=5,2;MEANALT=1.65957,2.10909;MQM=54.9485,59.9767;MQMR=0;NS=94;NUMALT=2;ODDS=0.364657;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=130373,30449;QR=0;RO=0;RPL=3669,857;RPP=7970.14,1863.96;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=7970.14,1863.96;SAR=3669,857;SRF=0;SRP=0;SRR=0;TYPE=complex,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:16:0,12,4:0:0:12,4:423,142:-46.2261,-11.9251,-8.31273,-34.6549,0,-33.4508	1/1:52:0,52,0:0:0:52,0:1835,0:-164.289,-15.6536,0,-164.289,-15.6536,-164.289	1/1:88:0,88,0:0:0:88,0:3128,0:-281.313,-26.4906,0,-281.313,-26.4906,-281.313	1/2:112:0,59,53:0:0:59,53:2107,1882:-325.3,-153.704,-135.943,-171.952,0,-155.997	1/1:31:0,30,1:0:0:30,1:1075,36:-96.3202,-9.0309,0,-93.3827,-5.73366,-93.0816	1/1:18:0,17,1:0:0:17,1:603,36:-54.0823,-5.11751,0,-51.1445,-1.82027,-50.8435	1/2:32:0,11,21:0:0:11,21:395,733:-92.0999,-59.9681,-56.6567,-32.4867,0,-26.165	1/1:90:0,90,0:0:0:90,0:3211,0:-288.933,-27.0927,0,-288.933,-27.0927,-288.933	1/2:54:0,36,18:0:0:36,18:1277,625:-155.083,-51.154,-40.3169,-104.279,0,-98.8601	1/2:41:0,13,28:0:0:13,28:459,981:-117.506,-80.1547,-76.2413,-37.703,0,-29.2742	1/1:32:0,32,0:0:0:32,0:1144,0:-103.198,-9.63296,0,-103.198,-9.63296,-103.198	1/2:60:0,36,24:0:0:36,24:1270,852:-172.721,-69.7753,-58.9382,-103.299,0,-96.0744	1/1:48:0,48,0:0:0:48,0:1715,0:-154.048,-14.4494,0,-154.048,-14.4494,-154.048	1/1:31:0,31,0:0:0:31,0:1104,0:-99.5419,-9.33193,0,-99.5419,-9.33193,-99.5419	1/1:50:0,50,0:0:0:50,0:1792,0:-161.408,-15.0515,0,-161.408,-15.0515,-161.408	1/2:32:0,18,14:0:0:18,14:635,502:-92.8044,-41.3028,-35.8843,-51.8569,0,-47.6425	1/1:20:0,20,0:0:0:20,0:718,0:-64.8827,-6.0206,0,-64.8827,-6.0206,-64.8827	1/1:14:0,14,0:0:0:14,0:500,0:-45.1883,-4.21442,0,-45.1883,-4.21442,-45.1883	1/2:13:0,4,9:0:0:4,9:144,324:-38.5185,-26.7966,-25.5925,-12.0812,0,-9.3719	1/2:46:0,30,16:0:0:30,16:1072,568:-133.971,-46.6358,-37.6049,-87.6911,0,-82.8746	1/2:100:0,49,51:0:0:49,51:1730,1816:-288.677,-148.369,-133.618,-140.661,0,-125.309	1/1:49:0,49,0:0:0:49,0:1734,0:-156.257,-14.7505,0,-156.257,-14.7505,-156.257	1/2:52:0,33,19:0:0:33,19:1178,665:-150.411,-54.4538,-44.5198,-96.3094,0,-90.5898	1/2:27:0,23,4:0:0:23,4:825,144:-79.298,-12.1095,-5.18581,-67.548,0,-66.3439	1/2:26:0,23,3:0:0:23,3:817,106:-75.3127,-8.98601,-2.06232,-66.6799,0,-65.7768	1/1:117:0,117,0:0:0:117,0:4135,0:-372.136,-35.2205,0,-372.136,-35.2205,-372.136	1/2:83:0,44,39:0:0:44,39:1547,1394:-239.436,-114.019,-100.774,-125.771,0,-114.031	1/2:13:0,6,7:0:0:6,7:208,250:-37.6185,-20.7395,-18.9333,-17.2302,0,-15.123	1/1:118:0,118,0:0:0:118,0:4163,0:-374.093,-35.5215,0,-374.093,-35.5215,-374.093	1/2:65:0,41,24:0:0:41,24:1458,860:-189.141,-70.4973,-58.1551,-119.001,0,-111.776	1/1:53:0,53,0:0:0:53,0:1887,0:-169.82,-15.9546,0,-169.82,-15.9546,-169.82	1/1:20:0,20,0:0:0:20,0:715,0:-64.5889,-6.0206,0,-64.5889,-6.0206,-64.5889	1/2:24:0,20,4:0:0:20,4:706,144:-69.4097,-12.1095,-6.0889,-57.6587,0,-56.4546	1/1:13:0,13,0:0:0:13,0:466,0:-42.2124,-3.91339,0,-42.2124,-3.91339,-42.2124	1/1:78:0,78,0:0:0:78,0:2770,0:-249.236,-23.4803,0,-249.236,-23.4803,-249.236	1/2:22:0,10,12:0:0:10,12:358,424:-63.9453,-34.8835,-31.8732,-29.4167,0,-25.8043	1/1:111:0,111,0:0:0:111,0:3956,0:-355.942,-33.4143,0,-355.942,-33.4143,-355.942	1/2:57:0,42,15:0:0:42,15:1499,536:-166.021,-44.0596,-31.4163,-122.319,0,-117.803	1/2:26:0,18,8:0:0:18,8:643,286:-75.9607,-23.6772,-18.2587,-52.6404,0,-50.2322	1/2:10:0,7,3:0:0:7,3:243,108:-28.8879,-9.17208,-7.06487,-20.0717,0,-19.1686	1/1:36:0,36,0:0:0:36,0:1280,0:-115.225,-10.8371,0,-115.225,-10.8371,-115.225	1/1:17:0,17,0:0:0:17,0:606,0:-54.796,-5.11751,0,-54.796,-5.11751,-54.796	1/2:76:0,65,10:0:0:65,10:2323,358:-217.839,-29.1934,-9.62645,-188.644,0,-185.634	1/2:34:0,19,15:0:0:19,15:663,540:-98.2811,-44.4211,-38.7015,-54.2148,0,-49.6994	1/1:22:0,22,0:0:0:22,0:777,0:-70.1784,-6.62266,0,-70.1784,-6.62266,-70.1784	1/2:74:0,52,22:0:0:52,22:1852,786:-215.234,-64.442,-48.7884,-151.149,0,-144.526	1/1:93:0,93,0:0:0:93,0:3306,0:-296.473,-27.9958,0,-296.473,-27.9958,-296.473	1/1:125:0,125,0:0:0:125,0:4461,0:-400.704,-37.6288,0,-400.704,-37.6288,-400.704	1/2:49:0,28,21:0:0:28,21:1002,739:-142.074,-60.5107,-52.0818,-81.9178,0,-75.5962	1/2:61:0,26,32:0:0:26,32:934,1134:-168.52,-92.3844,-84.5576,-76.1411,0,-66.5081	1/2:14:0,9,5:0:0:9,5:308,178:-39.8469,-14.8635,-12.1542,-25.3343,0,-23.8291	1/2:17:0,5,12:0:0:5,12:179,432:-50.1944,-35.6088,-34.1037,-14.9438,0,-11.3314	1/2:46:0,26,20:0:0:26,20:929,720:-134.742,-59.1082,-51.2814,-75.9921,0,-69.9715	1/2:20:0,11,9:0:0:11,9:396,322:-58.9177,-26.6149,-23.3036,-32.6614,0,-29.9521	1/1:14:0,14,0:0:0:14,0:495,0:-44.837,-4.21442,0,-44.837,-4.21442,-44.837	1/1:59:0,59,0:0:0:59,0:2089,0:-187.381,-17.7608,0,-187.381,-17.7608,-187.381	1/2:9:0,5,4:0:0:5,4:179,144:-26.6945,-12.1095,-10.6043,-14.9438,0,-13.7397	1/1:15:0,15,0:0:0:15,0:539,0:-4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chr10	20585813	.	A	T	14576.8	PASS	AB=0.250924;ABP=3357.44;AC=85;AF=0.452128;AN=188;AO=1598;CIGAR=1X;DP=6778;DPB=6778;DPRA=0;EPP=3473.02;EPPR=11238.2;GTI=26;LEN=1;MEANALT=1.05319;MQM=47.127;MQMR=40.1463;NS=94;NUMALT=1;ODDS=2.84393;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=56990;QR=183920;RO=5174;RPL=1598;RPP=3473.02;RPPR=11238.2;RPR=0;RUN=1;SAF=1598;SAP=3473.02;SAR=0;SRF=5174;SRP=11238.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:32:30,2:30:1072:2:68:0,-3.20128,-68.7244	0/1:54:46,8:46:1648:8:288:-9.39102,0,-123.217	0/1:73:64,9:64:2279:9:320:-5.08405,0,-157.565	0/1:133:101,32:101:3554:32:1148:-62.9331,0,-238.974	0/0:42:39,3:39:1400:3:108:0,-2.61072,-107.247	0/1:71:55,16:55:1961:16:576:-30.519,0,-129.498	0/1:62:56,6:56:2008:6:216:-0.990028,0,-149.116	0/1:53:45,8:45:1578:8:288:-10.1704,0,-109.753	0/1:66:52,12:52:1872:12:428:-19.0381,0,-114.316	0/1:58:40,18:40:1432:18:644:-40.4308,0,-102.779	0/1:42:21,21:21:752:21:744:-53.9585,0,-49.6177	0/1:85:65,20:65:2308:20:695:-33.7445,0,-145.749	0/1:43:27,16:27:951:16:572:-33.8623,0,-61.9582	0/1:43:30,13:30:1049:13:459:-28.2746,0,-76.0978	0/1:65:50,15:50:1762:15:540:-29.0318,0,-122.121	0/1:38:29,9:29:1019:9:311:-16.7801,0,-71.0175	0/1:33:27,6:27:943:6:212:-9.39416,0,-67.3173	0/1:29:21,8:21:748:8:288:-17.3951,0,-53.3356	0/1:17:10,7:10:360:7:252:-17.7866,0,-23.6971	0/1:43:35,8:35:1260:8:288:-13.1506,0,-94.0821	0/1:96:58,38:58:2065:38:1364:-93.5722,0,-138.913	0/1:100:90,10:90:3196:10:360:-1.30634,0,-230.627	0/1:93:70,23:70:2497:23:828:-46.3269,0,-169.756	0/1:75:63,12:63:2237:12:428:-16.1239,0,-166.368	0/1:28:25,3:25:900:3:108:-1.6037,0,-67.8585	0/1:198:161,37:161:5749:37:1324:-54.6145,0,-398.26	0/1:98:68,30:68:2436:30:1072:-66.8745,0,-173.971	0/1:23:11,12:11:392:12:428:-31.7627,0,-26.5389	0/1:143:104,39:104:3715:39:1404:-77.592,0,-250.052	0/1:61:34,27:34:1220:27:934:-65.5769,0,-78.2382	0/1:118:88,29:88:3137:29:1036:-57.1635,0,-217.435	0/1:114:100,14:100:3515:14:496:-7.37966,0,-264.235	0/1:49:37,12:37:1296:12:428:-23.4036,0,-97.0758	0/1:45:39,6:39:1392:6:216:-5.7012,0,-98.0277	0/1:103:82,21:82:2940:21:742:-35.6761,0,-217.965	0/0:72:69,3:69:2444:3:108:0,-11.6536,-171.525	0/1:141:101,40:101:3601:40:1418:-84.6263,0,-241.388	0/1:100:74,26:74:2629:26:932:-53.7082,0,-186.803	0/1:45:39,6:39:1404:6:216:-4.96693,0,-94.814	0/1:13:6,7:6:201:7:237:-17.6617,0,-13.9485	0/1:85:73,12:73:2608:12:428:-11.2598,0,-190.619	0/0:38:34,4:34:1203:4:144:0,-0.0696471,-93.4098	0/1:78:53,25:53:1865:25:896:-57.1432,0,-131.945	0/1:41:26,15:26:932:15:536:-35.9117,0,-62.1531	0/1:44:32,12:32:1122:12:432:-25.4424,0,-78.4295	0/1:100:87,13:87:3100:13:459:-10.8948,0,-217.429	0/1:50:36,14:36:1288:14:485:-28.6654,0,-89.3866	0/1:156:130,25:130:4619:25:896:-33.4041,0,-327.664	0/1:54:45,9:45:1585:9:324:-13.0465,0,-115.722	0/1:71:60,11:60:2125:11:392:-12.8754,0,-144.855	0/1:88:75,13:75:2653:13:464:-14.8804,0,-191.048	0/1:53:42,11:42:1512:11:396:-19.4258,0,-103.996	0/1:108:92,16:92:3277:16:576:-17.9551,0,-202.102	0/1:35:28,7:28:995:7:252:-12.3339,0,-69.3124	0/0:42:39,3:39:1400:3:108:0,-2.62271,-105.592	0/1:87:71,16:71:2532:16:576:-22.6821,0,-176.073	0/0:30:29,1:29:1024:1:36:0,-5.45747,-82.7136	0/1:52:45,7:45:1604:7:252:-6.53365,0,-116.705	0/0:158:144,14:144:5115:14:504:0,-2.1714,-392.562	0/1:49:31,18:31:1097:18:633:-42.2171,0,-74.2998	0/1:145:108,37:108:3847:37:1314:-68.3942,0,-269.846	0/1:70:63,7:63:2222:7:252:-1.79788,0,-167.251	0/1:114:84,30:84:2978:30:1076:-62.17,0,-199.429	0/1:47:34,13:34:1193:13:468:-28.0181,0,-79.3594	0/1:40:30,10:30:1068:10:360:-20.5646,0,-75.0565	0/1:50:40,10:40:1428:10:356:-17.1171,0,-95.4404	0/1:105:66,39:66:2352:39:1396:-93.523,0,-156.496	0/1:92:80,12:80:2809:12:432:-9.8539,0,-191.796	0/1:24:14,10:14:504:10:351:-24.5893,0,-36.292	0/1:38:25,13:25:885:13:468:-30.772,0,-55.7658	0/1:62:42,20:42:1512:20:716:-42.7144,0,-109.298	0/1:35:29,6:29:1044:6:212:-8.76565,0,-73.1155	0/1:103:76,27:76:2680:27:968:-55.9476,0,-184.161	0/1:46:31,15:31:1116:15:525:-33.4825,0,-67.1186	0/1:123:67,56:67:2396:56:2004:-142.857,0,-163.616	0/1:151:90,61:90:3190:61:2180:-149.575,0,-221.05	0/0:99:95,4:95:3356:4:144:0,-17.5304,-233.159	0/1:92:67,25:67:2369:25:892:-46.8241,0,-151.017	0/0:40:38,2:38:1364:2:72:0,-6.23758,-93.9711	0/1:88:59,29:59:2108:29:1010:-64.3463,0,-148.254	0/1:69:58,11:58:2050:11:396:-14.8051,0,-123.463	0/1:137:110,27:110:3925:27:968:-45.6122,0,-280.459	0/1:73:45,27:45:1589:27:968:-64.82,0,-104.283	0/1:27:17,10:17:600:10:360:-22.8779,0,-42.0286	0/1:43:34,8:34:1212:8:284:-11.5418,0,-87.488	0/1:113:83,30:83:2968:30:1054:-56.6972,0,-205.344	0/1:24:15,9:15:540:9:315:-21.3107,0,-35.6896	0/1:99:71,28:71:2532:28:995:-59.5943,0,-157.477	0/1:82:64,18:64:2273:18:644:-33.2639,0,-147.333	0/1:29:23,6:23:792:6:212:-10.6335,0,-58.1955	0/1:104:68,36:68:2432:36:1292:-78.2153,0,-174.284	0/1:69:53,16:53:1870:16:576:-28.2466,0,-131.442	0/1:77:32,45:32:1133:45:1589:-119.184,0,-60.3669	0/1:52:29,23:29:1005:23:828:-58.6489,0,-62.7752
chr10	20585825	.	A	T	24201.4	PASS	AB=0.387665;ABP=744.08;AC=93;AF=0.494681;AN=188;AO=2622;CIGAR=1X;DP=6777;DPB=6777;DPRA=0;EPP=5696.61;EPPR=9021.14;GTI=1;LEN=1;MEANALT=1.01064;MQM=31.3139;MQMR=48.5206;NS=94;NUMALT=1;ODDS=96.7123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93060;QR=147971;RO=4153;RPL=2621;RPP=5687.93;RPPR=8995.1;RPR=1;RUN=1;SAF=2621;SAP=5687.93;SAR=1;SRF=4150;SRP=8995.1;SRR=3;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:30:24,6:24:851:6:216:-7.43087,0,-50.5076	0/1:51:36,15:36:1292:15:536:-24.919,0,-99.991	0/1:74:26,48:26:923:48:1668:-104.948,0,-58.4815	0/1:132:67,65:67:2391:65:2305:-129.623,0,-172.758	0/1:42:23,19:23:828:19:680:-40.9227,0,-61.1056	0/1:75:47,28:47:1672:28:996:-51.5385,0,-116.034	0/1:63:44,19:44:1572:19:663:-29.8281,0,-121.79	0/1:53:25,28:25:896:28:1000:-58.6068,0,-63.2421	0/1:66:36,30:36:1272:30:1059:-60.5715,0,-76.8555	0/1:60:49,11:49:1752:11:379:-9.91032,0,-137.578	0/1:42:32,10:32:1148:10:360:-14.3305,0,-90.2778	0/1:87:57,30:57:2044:30:1064:-54.0063,0,-132.029	0/1:43:21,22:21:756:22:788:-46.8087,0,-49.7778	0/1:43:26,17:26:916:17:612:-36.2495,0,-69.2745	0/1:66:39,27:39:1383:27:957:-49.4506,0,-104.552	0/1:38:16,22:16:572:22:784:-50.4003,0,-39.9923	0/1:32:20,12:20:698:12:416:-22.3685,0,-51.6974	0/1:31:23,8:23:811:8:280:-12.2303,0,-62.4477	0/1:19:14,5:14:496:5:176:-7.86815,0,-36.9894	0/1:46:36,10:36:1292:10:348:-12.3804,0,-101.424	0/1:96:55,41:55:1972:41:1464:-85.7251,0,-148.277	0/1:99:54,45:54:1915:45:1585:-86.3902,0,-141.979	0/1:91:51,40:51:1819:40:1424:-76.5965,0,-135.009	0/1:75:48,27:48:1704:27:972:-53.6395,0,-129.58	0/1:27:15,12:15:532:12:428:-26.1898,0,-39.816	0/1:200:107,93:107:3828:93:3261:-179.231,0,-275.599	0/1:100:64,36:64:2272:36:1292:-71.6836,0,-173.422	0/1:23:18,5:18:648:5:180:-7.44504,0,-51.548	0/1:143:78,65:78:2778:65:2309:-124.156,0,-201.537	0/1:59:35,24:35:1244:24:844:-46.8499,0,-93.9154	0/1:123:75,48:75:2684:48:1695:-87.6249,0,-200.185	0/1:116:74,42:74:2628:42:1496:-82.826,0,-196.743	0/1:49:37,12:37:1320:12:428:-19.136,0,-103.237	0/1:43:24,19:24:856:19:684:-38.6498,0,-60.0254	0/1:104:83,21:83:2960:21:743:-25.2058,0,-230.821	0/1:72:51,21:51:1828:21:743:-34.3085,0,-114.882	0/1:141:76,65:76:2707:65:2302:-124.218,0,-200.351	0/1:94:54,40:54:1936:40:1432:-82.4607,0,-145.751	0/1:48:31,17:31:1108:17:608:-31.8917,0,-73.1917	0/0:16:15,1:15:532:1:36:0,-1.69284,-44.8547	0/1:83:41,42:41:1476:42:1508:-93.041,0,-105.57	0/1:39:31,8:31:1116:8:288:-10.8608,0,-86.6869	0/1:78:47,31:47:1676:31:1104:-63.1018,0,-126.213	0/1:40:28,12:28:1004:12:432:-19.2864,0,-77.3961	0/1:42:28,14:28:1008:14:485:-22.7371,0,-77.802	0/1:96:47,49:47:1675:49:1717:-98.8163,0,-120.218	0/1:46:26,20:26:928:20:707:-39.6637,0,-69.4676	0/1:156:92,64:92:3261:64:2279:-119.814,0,-244.131	0/1:54:37,17:37:1324:17:612:-28.2961,0,-102.351	0/1:71:32,39:32:1140:39:1383:-78.3064,0,-79.4202	0/1:92:57,35:57:2036:35:1245:-63.6221,0,-154.483	0/1:53:28,25:28:1004:25:890:-49.4588,0,-73.6236	0/1:113:80,33:80:2838:33:1165:-53.652,0,-175.424	0/1:35:21,14:21:739:14:497:-26.0964,0,-54.8868	0/1:45:36,9:36:1288:9:316:-11.2134,0,-95.8961	0/1:81:25,56:25:892:56:2004:-132.51,0,-53.2583	0/1:30:20,10:20:716:10:360:-17.3843,0,-55.5059	0/1:54:32,22:32:1139:22:784:-41.402,0,-85.7027	0/1:159:124,35:124:4411:35:1208:-41.4094,0,-347.102	0/1:50:25,25:25:896:25:896:-55.3823,0,-65.4465	0/1:141:90,51:90:3206:51:1820:-89.8949,0,-241.19	0/1:70:52,18:52:1864:18:648:-26.443,0,-145.68	0/1:117:64,53:64:2280:53:1891:-103.671,0,-167.289	0/1:45:22,23:22:784:23:816:-46.2079,0,-57.0471	0/1:40:18,22:18:640:22:792:-50.1192,0,-45.6742	0/1:53:22,31:22:792:31:1100:-64.9127,0,-55.3674	0/1:100:68,32:68:2419:32:1148:-52.4732,0,-185.709	0/1:89:35,54:35:1227:54:1928:-115.45,0,-82.5711	0/1:25:19,6:19:680:6:212:-9.49162,0,-53.8591	0/1:40:23,17:23:811:17:603:-34.0358,0,-56.6621	0/1:63:49,14:49:1756:14:485:-17.2435,0,-135.675	0/1:36:19,17:19:680:17:608:-33.6104,0,-50.1507	0/1:100:56,44:56:1978:44:1537:-86.4303,0,-146.038	0/1:44:27,17:27:968:17:591:-31.9068,0,-65.6737	0/1:125:88,37:88:3156:37:1308:-65.8185,0,-245.079	0/1:153:113,40:113:4006:40:1410:-59.6723,0,-313.253	0/1:95:64,31:64:2269:31:1095:-53.7272,0,-136.598	0/1:88:42,44:42:1475:44:1571:-91.7101,0,-91.9733	0/1:38:21,17:21:756:17:595:-34.7094,0,-42.3245	0/1:86:48,38:48:1716:38:1352:-80.5769,0,-128.034	0/1:68:42,26:42:1500:26:932:-49.4561,0,-88.428	0/1:139:87,52:87:3095:52:1855:-92.9055,0,-236.318	0/1:74:47,27:47:1684:27:964:-46.6924,0,-128.93	0/1:27:19,8:19:659:8:288:-13.697,0,-50.1828	0/1:41:31,10:31:1099:10:352:-12.2011,0,-85.7016	0/1:112:71,41:71:2524:41:1438:-70.9464,0,-188.04	0/1:26:22,4:22:788:4:144:-3.77321,0,-57.8645	0/1:99:72,27:72:2568:27:972:-44.1112,0,-173.902	0/1:80:49,31:49:1744:31:1089:-58.5951,0,-116.607	0/1:28:17,11:17:608:11:396:-22.8075,0,-46.1986	0/1:101:73,28:73:2596:28:996:-48.0296,0,-195.435	0/1:72:45,27:45:1569:27:956:-48.0899,0,-115.453	0/1:79:45,34:45:1607:34:1220:-65.5614,0,-120.068	0/1:54:30,24:30:1064:24:855:-46.3918,0,-79.2567
chr10	22177079	.	T	C	41378.8	PASS	AB=0.466691;ABP=55.8109;AC=52;AF=0.276596;AN=188;AO=2566;CIGAR=1X;DP=10737;DPB=10737;DPRA=0.906079;EPP=5575.01;EPPR=17726.6;GTI=1;LEN=1;MEANALT=1.05172;MQM=59.9599;MQMR=59.9969;NS=94;NUMALT=1;ODDS=3.7088;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=91142;QR=292109;RO=8166;RPL=0;RPP=5575.01;RPPR=17735.3;RPR=2566;RUN=1;SAF=2566;SAP=5575.01;SAR=0;SRF=8165;SRP=17726.6;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:34,29:34:1220:29:1023:-73.4168,0,-91.1419	0/0:221:221,0:221:7878:0:0:0,-66.5276,-709.045	0/0:160:160,0:160:5719:0:0:0,-48.1648,-514.828	0/1:175:79,96:79:2836:96:3420:-255.335,0,-202.798	0/1:122:62,60:62:2228:60:2128:-155.063,0,-164.058	0/1:102:56,46:56:2016:46:1628:-116.102,0,-151.008	0/1:183:103,79:103:3688:79:2812:-198.321,0,-277.124	0/0:177:177,0:177:6345:0:0:0,-53.2823,-571.138	0/1:133:71,62:71:2510:62:2185:-156.877,0,-186.113	0/1:125:83,42:83:2965:42:1483:-96.1356,0,-229.453	0/0:90:90,0:90:3220:0:0:0,-27.0927,-290.023	0/1:90:41,48:41:1472:48:1704:-126.495,0,-105.625	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/0:97:96,1:96:3435:1:36:0,-25.6016,-305.764	0/0:66:66,0:66:2372:0:0:0,-19.868,-213.738	0/1:59:32,27:32:1140:27:946:-67.6921,0,-85.1484	0/0:80:80,0:80:2868:0:0:0,-24.0824,-258.357	0/0:55:55,0:55:1950:0:0:0,-16.5566,-175.775	0/1:56:35,21:35:1252:21:731:-49.2484,0,-96.1274	0/1:256:143,113:143:5128:113:4031:-285.915,0,-384.597	0/1:179:83,96:83:2964:96:3400:-252.333,0,-213.099	0/0:92:92,0:92:3300:0:0:0,-27.6948,-297.215	0/1:126:62,64:62:2217:64:2284:-167.89,0,-161.863	0/0:112:108,4:108:3854:4:140:0,-20.7708,-334.108	0/1:97:60,37:60:2156:37:1305:-88.5495,0,-165.107	0/0:304:304,0:304:10840:0:0:0,-91.5131,-975.501	0/1:300:145,155:145:5196:155:5509:-405.626,0,-377.47	0/1:42:21,21:21:752:21:752:-55.363,0,-55.363	0/0:374:373,1:373:13331:1:32:0,-109.386,-1196.39	0/1:107:59,48:59:2093:48:1703:-121.345,0,-156.428	0/0:106:106,0:106:3766:0:0:0,-31.9092,-339.138	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:26:19,7:19:669:7:237:-13.8323,0,-52.7072	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:14:7,7:7:252:7:248:-18.4498,0,-18.8145	0/0:238:238,0:238:8547:0:0:0,-71.6451,-769.224	0/1:136:73,63:73:2620:63:2223:-159.236,0,-195.107	0/1:103:66,37:66:2363:37:1316:-87.7357,0,-181.922	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/0:164:164,0:164:5872:0:0:0,-49.3689,-528.591	0/0:43:43,0:43:1539:0:0:0,-12.9443,-138.802	0/1:174:120,54:120:4280:54:1924:-121.058,0,-333	0/1:114:56,58:56:2008:58:2050:-150.453,0,-146.676	0/0:72:71,1:71:2536:1:36:0,-18.0759,-224.893	0/1:113:51,62:51:1828:62:2220:-166.048,0,-130.785	0/0:190:190,0:190:6820:0:0:0,-57.1957,-613.868	0/0:113:113,0:113:4033:0:0:0,-34.0164,-363.157	0/1:101:64,37:64:2296:37:1311:-87.8868,0,-176.497	0/1:163:81,82:81:2900:82:2907:-212.799,0,-212.168	0/1:211:123,88:123:4413:88:3148:-220.028,0,-333.822	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/1:143:69,74:69:2480:74:2648:-195.516,0,-180.406	0/1:83:43,40:43:1540:40:1432:-104.192,0,-113.908	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:237:237,0:237:8452:0:0:0,-71.3441,-760.687	0/1:57:28,29:28:1004:29:1032:-76.0348,0,-73.5172	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	0/1:101:57,44:57:2044:44:1568:-111.004,0,-153.828	0/0:120:120,0:120:4296:0:0:0,-36.1236,-386.817	0/1:9:3,6:3:108:6:207:-16.2576,0,-7.3659	0/1:137:75,62:75:2688:62:2212:-158.104,0,-200.923	0/0:130:130,0:130:4630:0:0:0,-39.1339,-416.862	0/1:77:52,25:52:1853:25:896:-57.781,0,-143.869	0/0:125:124,0:124:4409:0:0:0,-37.3277,-396.773	0/1:162:99,63:99:3526:63:2232:-152.364,0,-268.78	0/0:153:153,0:153:5454:0:0:0,-46.0576,-490.987	0/1:41:20,21:20:720:21:752:-55.6607,0,-52.7865	0/1:102:58,44:58:2064:44:1572:-111.067,0,-155.326	0/0:105:103,1:103:3677:1:36:0,-27.9938,-327.607	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:138:138,0:138:4952:0:0:0,-41.5421,-445.811	0/0:103:103,0:103:3684:0:0:0,-31.0061,-331.763	0/0:283:283,0:283:10084:0:0:0,-85.1915,-907.496	0/0:133:132,1:132:4721:1:36:0,-36.4387,-421.45	0/1:144:56,88:56:2016:88:3118:-237.499,0,-138.365	0/1:143:62,81:62:2224:81:2896:-217.829,0,-157.377	0/1:9:3,6:3:108:6:212:-16.7155,0,-7.3659	0/1:111:60,51:60:2160:51:1807:-129.497,0,-161.252	0/1:154:83,71:83:2961:71:2518:-180.513,0,-220.363	0/0:284:283,0:283:10144:0:0:0,-85.1915,-912.7	0/0:112:112,0:112:4007:0:0:0,-33.7154,-360.819	0/0:70:70,0:70:2507:0:0:0,-21.0721,-225.882	0/0:96:96,0:96:3448:0:0:0,-28.8989,-310.532	0/1:156:84,72:84:3020:72:2559:-183.53,0,-225.069	0/1:36:19,17:19:684:17:608:-44.2149,0,-51.0532	0/1:96:52,44:52:1868:44:1558:-111.611,0,-139.5	0/1:75:38,37:38:1360:37:1308:-95.4424,0,-100.123	0/1:59:39,20:39:1400:20:707:-46.1938,0,-108.538	0/1:98:45,53:45:1605:53:1895:-141.326,0,-115.237	0/1:90:34,56:34:1216:56:1957:-149.311,0,-82.6539	0/0:125:125,0:125:4480:0:0:0,-37.6287,-403.369	0/0:139:139,0:139:4976:0:0:0,-41.8432,-447.989
chr10	22177117	.	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chr10	22221668	.	G	T	112635	PASS	AB=0.536644;ABP=51.39;AC=142;AF=0.755319;AN=188;AO=8455;CIGAR=1X;DP=10413;DPB=10413;DPRA=0;EPP=18362.8;EPPR=4248.24;GTI=3;LEN=1;MEANALT=1.03191;MQM=27.4127;MQMR=31.9581;NS=94;NUMALT=1;ODDS=4.2834;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=300840;QR=70010;RO=1955;RPL=8455;RPP=18362.8;RPPR=4248.24;RPR=0;RUN=1;SAF=0;SAP=18362.8;SAR=8455;SRF=0;SRP=4248.24;SRR=1955;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:28:13,15:13:468:15:525:-27.1016,0,-24.7832	1/1:93:0,93:0:0:93:3310:-224.14,-27.9958,0	1/1:80:0,80:0:0:80:2852:-196.267,-24.0824,0	0/1:134:65,69:65:2328:69:2468:-126.316,0,-135.054	0/1:47:29,18:29:1036:18:640:-28.8034,0,-61.4632	0/1:54:21,33:21:756:33:1165:-63.0009,0,-43.7108	0/1:79:41,38:41:1472:38:1352:-69.1018,0,-86.0948	1/1:148:0,148:0:0:148:5293:-361.886,-44.5524,0	0/1:24:16,8:16:576:8:288:-12.7496,0,-36.8744	0/1:64:29,35:29:1036:35:1233:-65.242,0,-57.9715	1/1:413:0,413:0:0:413:14744:-994.484,-124.325,0	0/1:64:32,32:32:1144:32:1144:-59.6731,0,-69.3675	1/1:78:0,78:0:0:78:2808:-190.496,-23.4803,0	1/1:68:0,68:0:0:68:2418:-161.789,-20.47,0	1/1:32:0,32:0:0:32:1138:-73.7619,-9.63296,0	0/1:48:28,20:28:1008:20:720:-34.9152,0,-63.3198	1/1:75:0,75:0:0:75:2688:-182.554,-22.5773,0	1/1:45:0,45:0:0:45:1620:-110.068,-13.5464,0	0/1:159:46,113:46:1656:113:4014:-224.183,0,-80.1513	0/1:116:71,45:71:2552:45:1620:-72.8723,0,-158.094	0/1:66:30,36:30:1068:36:1262:-67.3672,0,-64.8355	1/1:45:0,45:0:0:45:1586:-104.466,-13.5464,0	0/1:37:18,19:18:648:19:669:-35.2776,0,-41.798	1/1:57:3,54:3:108:54:1936:-125.306,-8.61715,0	0/1:57:28,29:28:1008:29:1040:-53.4258,0,-55.5425	1/1:185:1,184:1:36:184:6521:-427.286,-52.3444,0	0/1:132:77,55:77:2764:55:1972:-92.7363,0,-168.66	0/1:35:15,20:15:540:20:708:-38.7678,0,-30.4717	1/1:140:1,139:1:36:139:4976:-325.517,-39.2414,0	0/1:115:67,48:67:2404:48:1701:-79.384,0,-142.948	1/1:55:0,55:0:0:55:1934:-129.979,-16.5567,0	1/1:164:0,164:0:0:164:5822:-394.515,-49.3689,0	1/1:234:3,231:3:108:231:8260:-544.311,-61.4856,0	1/1:294:0,294:0:0:294:10341:-707.265,-88.5028,0	1/1:476:0,476:0:0:476:16835:-1134.39,-143.29,0	1/1:272:2,270:2:68:270:9643:-649.785,-76.6707,0	1/1:174:1,172:1:36:172:6142:-395.494,-49.0318,0	0/1:169:96,73:96:3436:73:2594:-126.451,0,-210.213	0/1:240:63,177:63:2256:177:6327:-351.459,0,-101.948	1/1:10:1,9:1:36:9:320:-19.4598,-0.107536,0	1/1:86:2,84:2:72:84:3001:-198.872,-19.9521,0	1/1:111:0,111:0:0:111:3968:-265.236,-33.4143,0	0/1:84:40,44:40:1432:44:1561:-82.6477,0,-79.2863	0/1:76:35,41:35:1260:41:1468:-78.0538,0,-75.4249	1/1:68:0,68:0:0:68:2395:-164.144,-20.47,0	0/1:54:37,17:37:1328:17:612:-24.6122,0,-86.0367	1/1:81:0,81:0:0:81:2889:-198.619,-24.3834,0	1/1:88:0,88:0:0:88:3156:-214.187,-26.4906,0	0/1:76:36,40:36:1292:40:1416:-74.5654,0,-78.1624	0/1:78:44,34:44:1565:34:1212:-59.0897,0,-91.6577	0/1:149:79,70:79:2828:70:2512:-120.154,0,-167.633	1/1:255:10,245:10:345:245:8704:-565.405,-50.6784,0	0/1:184:120,64:120:4273:64:2254:-101.198,0,-264.627	0/1:22:15,7:15:540:7:248:-9.67479,0,-34.4698	1/1:363:0,363:0:0:363:12884:-871.96,-109.274,0	1/1:91:0,91:0:0:91:3268:-220.379,-27.3937,0	0/1:28:17,11:17:612:11:392:-18.5697,0,-38.5173	1/1:172:0,171:0:0:171:6069:-396.826,-51.4761,0	1/1:126:8,118:8:284:118:4182:-248.66,-14.4158,0	0/1:45:24,21:24:856:21:752:-37.7103,0,-50.4082	1/1:106:0,106:0:0:106:3753:-253.665,-31.9092,0	0/1:36:7,29:7:244:29:1036:-61.1506,0,-8.60891	0/1:114:44,70:44:1576:70:2504:-130.623,0,-85.0104	1/1:104:0,104:0:0:104:3721:-251.172,-31.3071,0	0/1:62:31,31:31:1108:31:1093:-56.4033,0,-65.4437	1/1:50:0,50:0:0:50:1780:-119.277,-15.0515,0	0/1:87:53,34:53:1896:34:1203:-56.6549,0,-115.942	1/1:94:0,94:0:0:94:3308:-226.814,-28.2968,0	0/1:86:17,69:17:612:69:2464:-140.513,0,-19.7701	0/1:73:39,34:39:1388:34:1212:-62.1684,0,-85.0242	1/1:55:0,55:0:0:55:1957:-123.22,-16.5567,0	1/1:459:0,459:0:0:459:16387:-1111.45,-138.173,0	1/1:90:0,90:0:0:90:3216:-216.655,-27.0927,0	1/1:57:0,57:0:0:57:1980:-135.731,-17.1587,0	1/1:147:0,147:0:0:147:5238:-356.996,-44.2514,0	1/1:99:1,98:1:36:98:3486:-236.312,-26.4558,0	0/1:110:66,44:66:2368:44:1545:-74.6432,0,-143.819	0/1:92:54,38:54:1936:38:1364:-66.16,0,-112.373	1/1:58:0,58:0:0:58:2054:-139.565,-17.4597,0	0/1:79:42,37:42:1504:37:1313:-65.8596,0,-91.7559	0/1:77:39,38:39:1388:38:1364:-68.5348,0,-83.5988	1/1:143:0,143:0:0:143:5076:-342.245,-43.0473,0	1/1:72:0,72:0:0:72:2520:-169.092,-21.6742,0	1/1:51:0,50:0:0:50:1766:-117.044,-15.0515,0	1/1:44:0,44:0:0:44:1565:-103.29,-13.2453,0	0/1:80:60,20:60:2156:20:716:-21.9323,0,-139.565	0/1:34:14,20:14:504:20:705:-38.5723,0,-31.4139	0/1:58:32,26:32:1148:26:932:-46.3539,0,-71.1591	0/1:68:45,23:45:1612:23:813:-32.7329,0,-102.751	0/1:105:25,80:25:892:80:2823:-163.184,0,-35.4566	0/1:441:68,373:68:2435:373:13345:-765.012,0,-52.2772	0/1:82:54,28:54:1936:28:989:-42.4063,0,-119.338	1/1:11:0,11:0:0:11:396:-27.362,-3.31133,0	1/1:46:0,46:0:0:46:1644:-112.481,-13.8474,0
chr10	23061639	.	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chr10	23114020	.	T	C	162815	PASS	AB=0.485076;ABP=41.3799;AC=52;AF=0.276596;AN=188;AO=9655;CIGAR=1X;DP=35203;DPB=35203;DPRA=2.79212;EPP=20968.6;EPPR=55451.6;GTI=0;LEN=1;MEANALT=1.1791;MQM=59.6883;MQMR=59.8124;NS=94;NUMALT=1;ODDS=27.2073;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=345878;QR=914892;RO=25535;RPL=0;RPP=20968.6;RPPR=55451.6;RPR=9655;RUN=1;SAF=9655;SAP=20968.6;SAR=0;SRF=25535;SRP=55451.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:21,19:21:752:19:680:-49.4798,0,-55.9651	0/0:740:739,1:739:26503:1:36:0,-219.164,-2380.58	0/0:166:166,0:166:5960:0:0:0,-49.971,-536.459	0/1:260:142,118:142:5036:118:4225:-302.111,0,-375.108	0/1:164:64,100:64:2292:100:3592:-274.109,0,-157.172	0/1:121:59,61:59:2105:61:2184:-160.46,0,-153.381	0/1:180:92,88:92:3266:88:3129:-227.642,0,-239.941	0/0:320:320,0:320:11482:0:0:0,-96.3296,-1033.07	0/1:98:43,55:43:1548:55:1968:-147.801,0,-110.112	0/1:133:73,60:73:2624:60:2156:-154.262,0,-196.362	0/0:528:527,1:527:18907:1:36:0,-155.355,-1696.07	0/1:71:30,41:30:1076:41:1468:-111.035,0,-75.7716	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/0:70:70,0:70:2496:0:0:0,-21.0721,-224.882	0/0:59:59,0:59:2124:0:0:0,-17.7608,-191.42	0/1:73:35,38:35:1241:38:1355:-100.275,0,-90.0091	0/0:72:72,0:72:2576:0:0:0,-21.6742,-231.995	0/0:61:61,0:61:2196:0:0:0,-18.3628,-197.889	0/1:254:124,130:124:4452:130:4656:-342.667,0,-324.362	0/1:377:199,178:199:7148:178:6376:-460.405,0,-529.833	0/1:200:108,92:108:3861:92:3296:-236.62,0,-287.462	0/0:169:169,0:169:6061:0:0:0,-50.8741,-545.554	0/1:56:18,38:18:640:38:1360:-105.835,0,-41.0716	0/0:109:102,7:102:3656:7:252:0,-9.78331,-306.198	0/1:111:56,55:56:1993:55:1968:-143.981,0,-146.219	0/0:326:326,0:326:11648:0:0:0,-98.1358,-1048.16	0/1:319:153,166:153:5500:166:5942:-438.825,0,-399.067	0/1:29:13,16:13:468:16:563:-42.2693,0,-33.7298	0/0:498:498,0:498:17858:0:0:0,-149.913,-1606.76	0/1:638:358,279:358:12826:279:10020:-709.732,0,-962.118	0/0:148:147,1:147:5224:1:36:0,-40.9542,-466.626	0/0:1032:1028,4:1028:36874:4:144:0,-297.349,-3303.36	0/1:1289:624,663:624:22357:663:23737:-1747.56,0,-1623.55	0/0:1018:1016,1:1016:36342:1:36:0,-302.834,-3265.62	0/0:2260:2256,4:2256:80739:4:144:0,-667.037,-7249.46	0/1:1330:671,659:671:24086:659:23624:-1724.96,0,-1766.54	0/0:166:166,0:166:5960:0:0:0,-49.971,-536.472	0/1:221:122,99:122:4371:99:3544:-252.609,0,-326.994	0/1:568:290,278:290:10432:278:9979:-726.665,0,-767.765	0/1:782:388,393:388:13883:393:14101:-1032.94,0,-1013.36	0/0:323:318,5:318:11410:5:180:0,-80.6806,-1010.18	0/0:273:271,1:271:9732:1:36:0,-78.6241,-871.807	0/1:180:67,113:67:2389:113:4060:-311.392,0,-161.08	0/1:65:26,39:26:936:39:1404:-107.084,0,-64.9925	0/0:64:64,0:64:2304:0:0:0,-19.2659,-207.587	0/1:125:48,77:48:1709:77:2768:-211.406,0,-116.457	0/0:180:180,0:180:6457:0:0:0,-54.1854,-581.188	0/0:264:264,0:264:9438:0:0:0,-79.4719,-849.235	0/1:84:41,43:41:1464:43:1544:-113.967,0,-106.761	0/1:196:108,88:108:3853:88:3145:-224.247,0,-287.963	0/1:263:121,142:121:4322:142:5073:-377.542,0,-309.641	0/1:3340:2095,1245:2095:74986:1245:44548:-3001.5,0,-5739.55	0/1:537:250,287:250:8942:287:10251:-760.685,0,-643.022	0/1:84:39,45:39:1381:45:1612:-120.084,0,-99.2917	0/0:982:981,1:981:35103:1:36:0,-292.022,-3154.02	0/0:198:198,0:198:7093:0:0:0,-59.6039,-638.411	0/1:63:18,45:18:648:45:1596:-124.941,0,-39.687	0/0:1755:1754,1:1754:62893:1:36:0,-524.709,-5652.45	0/1:1840:946,894:946:33879:894:32033:-2327.05,0,-2493.73	0/1:143:65,78:65:2328:78:2792:-208.452,0,-166.706	0/0:104:104,0:104:3736:0:0:0,-31.3071,-336.418	0/1:788:426,360:426:15246:360:12898:-923.632,0,-1134.94	0/1:190:95,94:95:3397:94:3364:-245.713,0,-248.728	0/0:343:343,0:343:12317:0:0:0,-103.253,-1107.99	0/1:91:57,34:57:2044:34:1220:-82.7016,0,-156.83	0/0:228:228,0:228:8200:0:0:0,-68.6348,-737.988	0/1:171:97,74:97:3469:74:2647:-186.905,0,-260.928	0/0:250:245,4:245:8807:4:144:0,-62.002,-779.171	0/1:426:193,233:193:6924:233:8316:-620.129,0,-494.931	0/1:111:52,59:52:1872:59:2120:-157.63,0,-135.327	0/0:78:78,0:78:2808:0:0:0,-23.4803,-252.926	0/0:1353:1352,1:1352:48415:1:36:0,-403.695,-4351.7	0/0:104:104,0:104:3714:0:0:0,-31.3071,-334.446	0/0:79:77,1:77:2757:1:36:0,-20.2414,-244.738	0/0:193:193,0:193:6925:0:0:0,-58.0988,-623.277	0/0:274:274,0:274:9844:0:0:0,-82.4822,-885.887	0/1:252:119,133:119:4268:133:4756:-352.319,0,-308.413	0/1:196:82,114:82:2940:114:4092:-309.353,0,-205.793	0/1:1209:573,635:573:20566:635:22816:-1688.67,0,-1486.46	0/1:199:93,106:93:3321:106:3804:-282.628,0,-239.202	0/1:205:74,131:74:2656:131:4696:-361.064,0,-177.566	0/0:233:233,0:233:8345:0:0:0,-70.14,-751.038	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.921	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:60:60,0:60:2160:0:0:0,-18.0618,-194.659	0/1:99:54,45:54:1940:45:1616:-115.928,0,-145.066	0/1:33:14,19:14:500:19:680:-51.5952,0,-35.4022	0/1:72:43,29:43:1548:29:1032:-71.5079,0,-117.931	0/1:51:26,25:26:936:25:896:-65.5996,0,-69.1988	0/1:501:224,277:224:8026:277:9943:-743.603,0,-571.479	0/1:923:457,466:457:16401:466:16681:-1222.92,0,-1197.47	0/1:83:18,65:18:648:65:2328:-184.786,0,-33.6664	0/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chr10	23114026	.	G	T	525304	PASS	AB=0.51071;ABP=22.7324;AC=136;AF=0.723404;AN=188;AO=25270;CIGAR=1X;DP=35014;DPB=35014;DPRA=0;EPP=54876.1;EPPR=21053.3;GTI=0;LEN=1;MEANALT=1.29787;MQM=59.8125;MQMR=59.7001;NS=94;NUMALT=1;ODDS=24.4325;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=905289;QR=346034;RO=9694;RPL=0;RPP=54876.1;RPPR=21053.3;RPR=25270;RUN=1;SAF=25270;SAP=54876.1;SAR=0;SRF=9694;SRP=21053.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:39:19,20:19:650:20:720:-53.3886,0,-47.076	1/1:725:1,723:1:36:723:25890:-2325.5,-214.707,0	1/1:164:0,164:0:0:164:5870:-528.363,-49.3689,0	0/1:260:119,139:119:4207:139:4973:-369.668,0,-300.762	0/1:164:100,64:100:3554:64:2296:-157.532,0,-270.698	0/1:126:65,61:65:2332:61:2179:-158.446,0,-172.18	0/1:180:89,91:89:3177:91:3256:-239.043,0,-231.964	1/1:322:0,322:0:0:322:11526:-1037.02,-96.9317,0	0/1:100:57,43:57:2006:43:1544:-109.15,0,-150.679	0/1:132:63,69:63:2245:69:2464:-182.27,0,-162.25	1/1:521:0,520:0:0:520:18643:-1675.91,-156.536,0	0/1:68:38,30:38:1360:30:1080:-77.035,0,-102.222	1/1:46:0,46:0:0:46:1643:-148.158,-13.8474,0	1/1:70:0,70:0:0:70:2520:-227.043,-21.0721,0	1/1:59:0,59:0:0:59:2112:-190.341,-17.7608,0	0/1:72:37,35:37:1328:35:1260:-92.0313,0,-98.1481	1/1:70:0,70:0:0:70:2507:-225.787,-21.0721,0	1/1:62:0,61:0:0:61:2192:-197.169,-18.3628,0	0/1:257:131,126:131:4677:126:4518:-329.384,0,-343.694	0/1:374:176,198:176:6280:198:7058:-522.64,0,-452.675	0/1:196:90,104:90:3220:104:3736:-277.647,0,-231.247	1/1:173:0,173:0:0:173:6207:-558.703,-52.0782,0	0/1:56:38,18:38:1364:18:648:-41.7942,0,-106.195	1/1:110:7,103:7:252:103:3683:-308.627,-10.0843,0	0/1:110:54,56:54:1924:56:2004:-147.51,0,-140.324	1/1:319:0,318:0:0:318:11392:-1024.76,-95.7275,0	0/1:316:162,154:162:5770:154:5524:-402.126,0,-424.27	0/1:29:16,13:16:568:13:468:-33.7298,0,-42.722	1/1:496:0,495:0:0:495:17755:-1597.14,-149.01,0	0/1:631:280,351:280:10014:351:12529:-937.402,0,-711.22	1/1:143:1,141:1:36:141:5072:-452.372,-39.5078,0	1/1:1023:4,1019:4:144:1019:36545:-3273.8,-294.64,0	0/1:1287:668,619:668:23825:619:22201:-1609.52,0,-1755.61	1/1:1013:1,1011:1:36:1011:36163:-3249.81,-301.329,0	1/1:2236:2,2233:2:72:2233:79989:-7188.67,-666.325,0	0/1:1327:662,661:662:23638:661:23698:-1733.36,0,-1727.89	1/1:162:0,162:0:0:162:5820:-523.886,-48.7669,0	0/1:222:101,121:101:3609:121:4348:-324.624,0,-258.153	0/1:565:279,286:279:10008:286:10259:-753.11,0,-730.173	0/1:779:391,383:391:13990:383:13712:-1000.08,0,-1025.1	1/1:323:5,315:5:180:315:11290:-999.397,-80.1374,0	1/1:271:1,270:1:36:270:9697:-868.624,-77.9809,0	0/1:177:112,65:112:4028:65:2332:-156.857,0,-309.416	0/1:65:39,26:39:1377:26:932:-64.6319,0,-104.652	1/1:64:0,63:0:0:63:2247:-202.105,-18.9649,0	0/1:121:74,47:74:2630:47:1688:-115.774,0,-200.194	1/1:176:0,175:0:0:175:6281:-565.15,-52.6803,0	1/1:256:0,256:0:0:256:9140:-822.441,-77.0637,0	0/1:85:44,41:44:1565:41:1474:-107.364,0,-115.552	0/1:193:87,106:87:3124:106:3812:-285.177,0,-223.27	0/1:261:141,120:141:5048:120:4289:-307.276,0,-375.888	0/1:3329:1246,2080:1246:44397:2080:74526:-5702.08,0,-2992.1	0/1:540:291,249:291:10406:249:8897:-638.075,0,-773.657	0/1:83:44,39:44:1576:39:1376:-99.1418,0,-117.146	1/1:967:0,967:0:0:967:34661:-3117.85,-291.096,0	1/1:197:0,197:0:0:197:7084:-637.597,-59.3029,0	0/1:63:45,18:45:1612:18:644:-39.3257,0,-126.386	1/1:1743:1,1735:1:36:1735:62191:-5590.36,-519.346,0	0/1:1841:900,940:900:32059:940:33678:-2475.4,0,-2328.98	0/1:140:77,63:77:2741:63:2241:-159.799,0,-204.771	1/1:103:0,103:0:0:103:3696:-332.82,-31.0061,0	0/1:801:377,423:377:13424:423:15144:-1121.54,0,-966.751	0/1:193:99,94:99:3529:94:3376:-245.956,0,-259.671	1/1:342:0,340:0:0:340:12174:-1094.78,-102.35,0	0/1:90:33,57:33:1154:57:2048:-157.491,0,-77.0581	1/1:225:0,225:0:0:225:8061:-725.495,-67.7318,0	0/1:165:71,94:71:2533:94:3368:-253.65,0,-178.455	1/1:246:4,242:4:144:242:8642:-764.425,-60.7398,0	0/1:433:237,196:237:8491:196:7029:-502.276,0,-633.461	0/1:110:59,51:59:2120:51:1826:-131.505,0,-157.931	1/1:78:0,78:0:0:78:2804:-252.567,-23.4803,0	1/1:1343:1,1335:1:36:1335:47783:-4294.94,-398.932,0	1/1:104:0,104:0:0:104:3728:-335.708,-31.3071,0	1/1:77:1,76:1:36:76:2692:-238.897,-19.581,0	1/1:188:0,188:0:0:188:6708:-603.768,-56.5936,0	1/1:270:0,270:0:0:270:9704:-873.296,-81.2781,0	0/1:251:133,116:133:4738:116:4151:-298.513,0,-351.31	0/1:195:114,81:114:4069:81:2889:-201.514,0,-307.575	0/1:1210:641,569:641:22898:569:20384:-1469.73,0,-1695.7	0/1:197:107,90:107:3836:90:3223:-230.989,0,-286.109	0/1:203:130,73:130:4649:73:2608:-173.851,0,-357.437	1/1:232:0,232:0:0:232:8303:-747.262,-69.839,0	1/1:90:0,90:0:0:90:3221:-290.094,-27.0927,0	1/1:44:0,44:0:0:44:1576:-142.132,-13.2453,0	1/1:60:0,60:0:0:60:2156:-194.299,-18.0618,0	0/1:99:45,54:45:1616:54:1938:-144.889,0,-115.928	0/1:33:19,14:19:684:14:504:-35.7641,0,-51.9563	0/1:70:28,42:28:1000:42:1500:-114.214,0,-69.2351	0/1:50:24,26:24:860:26:936:-69.4998,0,-62.6622	0/1:499:276,223:276:9879:223:8000:-569.774,0,-738.452	0/1:926:473,452:473:16921:452:16192:-1178.06,0,-1243.54	0/1:81:63,18:63:2244:18:644:-33.9072,0,-177.832	1/1:28:0,28:0:0:28: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chr10	24831754	.	A	G	130576	PASS	AB=0.594387;ABP=295.282;AC=136;AF=0.723404;AN=188;AO=6186;CIGAR=1X;DP=7728;DPB=7728;DPRA=0;EPP=13435.7;EPPR=3288.72;GTI=5;LEN=1;MEANALT=1.01064;MQM=59.6172;MQMR=42.599;NS=94;NUMALT=1;ODDS=1.46229;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=221078;QR=55214;RO=1541;RPL=0;RPP=13435.7;RPPR=3288.72;RPR=6186;RUN=1;SAF=6186;SAP=13435.7;SAR=0;SRF=1541;SRP=3349.25;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:67:13,54:13:468:54:1924:-153.268,0,-20.5333	1/1:48:1,47:1:36:47:1669:-147.041,-10.9949,0	1/1:174:0,174:0:0:174:6225:-560.345,-52.3792,0	0/1:238:108,130:108:3865:130:4627:-344.857,0,-270.169	0/1:44:9,35:9:324:35:1256:-100.044,0,-14.9573	0/1:22:7,15:7:252:15:532:-41.5904,0,-15.4249	0/1:38:16,22:16:576:22:784:-59.4448,0,-39.8044	1/1:118:2,116:2:72:116:4144:-366.578,-28.958,0	0/1:121:38,83:38:1349:83:2980:-232.007,0,-80.5666	0/1:35:12,23:12:432:23:809:-62.5913,0,-27.6591	1/1:31:0,31:0:0:31:1093:-98.6661,-9.33193,0	0/1:84:33,51:33:1188:51:1802:-137.171,0,-77.8307	1/1:69:0,69:0:0:69:2461:-221.743,-20.7711,0	1/1:35:0,35:0:0:35:1233:-111.216,-10.5361,0	1/1:70:0,69:0:0:69:2476:-222.637,-20.7711,0	0/1:36:14,22:14:504:22:788:-60.4077,0,-32.3611	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	0/1:17:5,12:5:165:12:432:-34.1037,0,-8.93932	0/1:183:95,88:95:3420:88:3145:-228.156,0,-244.888	0/1:113:59,54:59:2108:54:1917:-138.733,0,-149.395	1/1:223:0,223:0:0:223:7973:-717.025,-67.1297,0	0/1:111:46,65:46:1648:65:2291:-172.89,0,-111.993	1/1:78:1,77:1:36:77:2764:-244.935,-19.9776,0	0/1:71:19,52:19:684:52:1853:-145.675,0,-38.8733	1/1:278:0,278:0:0:278:9939:-894.313,-83.6863,0	0/1:187:79,108:79:2821:108:3841:-289.479,0,-190.342	0/1:27:14,13:14:504:13:468:-34.3318,0,-36.3565	1/1:252:0,252:0:0:252:9002:-809.85,-75.8596,0	0/1:130:39,91:39:1361:91:3276:-255.757,0,-80.1046	1/1:88:0,88:0:0:88:3160:-284.596,-26.4906,0	1/1:6:0,6:0:0:6:201:-18.417,-1.80618,0	0/1:21:3,18:3:108:18:644:-51.969,0,-3.48593	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:22:11,11:11:396:11:396:-29.3601,0,-27.9222	1/1:184:0,184:0:0:184:6599:-593.814,-55.3895,0	0/1:111:40,71:40:1440:71:2548:-196.156,0,-92.5185	0/1:36:11,25:11:396:25:900:-70.4839,0,-23.5254	0/1:6:1,5:1:36:5:180:-13.9419,0,-1.69652	1/1:114:2,112:2:72:112:4020:-355.272,-27.6623,0	1/1:28:0,28:0:0:28:1008:-90.924,-8.42884,0	0/1:200:75,125:75:2670:125:4484:-343.242,0,-171.185	0/1:33:10,23:10:356:23:828:-64.9101,0,-21.9147	1/1:37:0,37:0:0:37:1332:-120.169,-11.1381,0	0/1:124:41,83:41:1472:83:2953:-228.606,0,-93.9819	1/1:162:0,162:0:0:162:5790:-521.211,-48.7669,0	1/1:133:0,133:0:0:133:4746:-427.112,-40.037,0	0/1:55:20,35:20:720:35:1241:-95.1355,0,-47.0134	0/1:89:37,52:37:1328:52:1855:-140.397,0,-90.6216	0/1:141:46,95:46:1656:95:3392:-263.048,0,-105.237	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.09496	0/1:124:52,72:52:1872:72:2584:-195.459,0,-121.347	0/1:16:6,10:6:216:10:360:-27.9101,0,-14.7559	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:103:0,103:0:0:103:3646:-328.145,-31.0061,0	0/1:28:15,13:15:540:13:464:-33.6687,0,-39.6321	1/1:10:0,10:0:0:10:356:-32.3635,-3.0103,0	0/1:13:7,6:7:252:6:193:-13.7716,0,-17.8442	0/1:51:19,32:19:684:32:1144:-87.917,0,-44.4214	1/1:87:0,87:0:0:87:3117:-280.085,-26.1896,0	0/1:10:2,8:2:72:8:288:-23.2284,0,-2.39126	0/1:172:103,69:103:3689:69:2484:-172.036,0,-276.717	1/1:127:0,127:0:0:127:4564:-410.839,-38.2308,0	0/1:70:24,46:24:864:46:1652:-127.55,0,-54.7452	1/1:110:1,109:1:32:109:3871:-345.38,-29.9399,0	0/1:173:51,122:51:1821:122:4350:-339.51,0,-108.762	1/1:91:0,91:0:0:91:3264:-293.923,-27.3937,0	0/1:27:15,12:15:517:12:432:-31.0483,0,-37.6101	0/1:28:15,13:15:540:13:448:-32.2182,0,-38.4916	1/1:43:0,43:0:0:43:1548:-139.595,-12.9443,0	1/1:22:0,22:0:0:22:788:-71.2163,-6.62266,0	1/1:148:0,148:0:0:148:5290:-476.232,-44.5524,0	1/1:94:0,94:0:0:94:3357:-302.345,-28.2968,0	1/1:182:0,182:0:0:182:6489:-583.782,-54.7875,0	1/1:171:0,171:0:0:171:6129:-551.573,-51.4761,0	0/1:64:13,51:13:468:51:1806:-143.552,0,-21.1976	0/1:110:47,63:47:1692:63:2240:-168.748,0,-112.474	0/1:15:7,8:7:252:8:288:-21.752,0,-17.5933	0/1:72:37,35:37:1328:35:1256:-91.5814,0,-94.7671	0/1:60:28,32:28:1008:32:1139:-84.7566,0,-68.1497	1/1:184:0,184:0:0:184:6601:-594.11,-55.3895,0	1/1:49:0,49:0:0:49:1726:-155.563,-14.7505,0	1/1:58:0,58:0:0:58:2080:-187.385,-17.4597,0	1/1:50:0,50:0:0:50:1800:-162.254,-15.0515,0	0/1:85:45,40:45:1612:40:1440:-104.226,0,-115.127	0/1:9:6,3:6:216:3:108:-7.3659,0,-16.4222	0/1:57:24,33:24:864:33:1184:-89.7096,0,-57.7868	0/1:58:26,32:26:936:32:1152:-86.5304,0,-63.8943	0/1:15:7,8:7:252:8:288:-20.9653,0,-17.9018	0/1:87:39,48:39:1404:48:1713:-128.096,0,-96.7251	0/1:65:40,25:40:1440:25:900:-61.7541,0,-107.581	1/1:152:0,152:0:0:152:5437:-488.742,-45.7566,0	1/1:74:2,72:2:72:72:2569:-224.715,-15.5893,0
chr10	24831762	.	TCG	TCC,TCCG	156435	PASS	AB=0.603414,0.392667;ABP=334.913,360.54;AC=136,52;AF=0.723404,0.276596;AN=188;AO=6007,1412;CIGAR=2M1X,1M1I2M;DP=7444;DPB=7916.67;DPRA=0,0.848481;EPP=13047,2830.75;EPPR=3.0103;GTI=6;LEN=1,1;MEANALT=1.87234,2.25424;MQM=59.6496,42.6629;MQMR=50;NS=94;NUMALT=2;ODDS=0.26168;PAIRED=0,0;PAIREDR=0;PAO=1,0;PQA=32,0;PQR=0;PRO=0;QA=212245,49389;QR=70;RO=2;RPL=0,1384;RPP=13047,2830.75;RPPR=3.0103;RPR=6007,28;RUN=1,1;SAF=6007,1412;SAP=13047,3069.13;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=snp,ins	GT:DP:AD:RO:QR:AO:QA:GL	1/2:65:0,54,11:0:0:54,11:1928,396:-188.367,-31.1728,-14.9171,-157.541,0,-154.23	1/1:46:0,45,1:0:0:45,1:1612,36:-145.024,-13.5464,0,-142.217,-10.3929,-141.916	1/1:169:0,169,0:0:0:169,0:5965,0:-536.966,-50.8741,0,-536.966,-50.8741,-536.966	1/2:227:0,125,101:0:0:125,101:4407,3533:-641.104,-282.314,-244.686,-358.781,0,-328.377	1/2:41:0,33,8:0:0:33,8:1154,279:-116.073,-22.2055,-12.2715,-94.2074,0,-91.7992	1/2:22:0,15,7:0:0:15,7:532,234:-61.887,-18.522,-14.0065,-43.6976,0,-41.5904	1/2:39:0,22,16:0:0:22,16:780,560:-108.321,-44.7702,-38.1476,-63.5408,0,-58.7243	1/1:113:0,111,2:0:0:111,2:3925,63:-353.138,-33.4143,0,-348.221,-28.1898,-347.619	1/2:118:0,84,34:0:0:84,34:2975,1167:-333.643,-91.2824,-65.9959,-242.698,0,-232.463	1/2:32:0,20,12:0:0:20,12:716,424:-92.4774,-34.0922,-28.0716,-58.7355,0,-55.1231	1/1:30:0,30,0:0:0:30,0:1059,0:-95.592,-9.0309,0,-95.592,-9.0309,-95.592	1/2:82:0,50,32:0:0:50,32:1775,1132:-233.572,-88.9377,-73.8862,-144.981,0,-135.348	1/1:69:0,69,0:0:0:69,0:2412,0:-217.334,-20.7711,0,-217.334,-20.7711,-217.334	1/1:35:0,34,0:0:0:34,0:1206,0:-108.491,-10.235,0,-108.491,-10.235,-108.491	1/1:66:0,66,0:0:0:66,0:2342,0:-210.961,-19.868,0,-210.961,-19.868,-210.961	1/2:33:0,20,13:0:0:20,13:694,448:-91.9781,-35.5577,-29.5371,-56.7598,0,-52.8464	1/1:24:0,24,0:0:0:24,0:850,0:-76.8201,-7.22472,0,-76.8201,-7.22472,-76.8201	1/1:16:0,16,0:0:0:16,0:568,0:-51.4519,-4.81648,0,-51.4519,-4.81648,-51.4519	1/2:16:0,11,4:0:0:11,4:383,133:-41.3141,-10.1523,-6.84101,-31.1463,0,-29.9421	1/2:170:0,84,84:0:0:84,84:2979,2950:-477.83,-235.178,-209.891,-242.721,0,-217.434	1/2:108:0,54,54:0:0:54,54:1915,1878:-304.155,-148.186,-131.931,-156.315,0,-140.059	1/1:218:0,216,1:0:0:216,1:7652,36:-687.885,-65.0225,0,-684.949,-62.0118,-684.648	1/2:101:0,59,41:0:0:59,41:2074,1401:-280.285,-111.559,-93.7984,-168.715,0,-156.373	1/1:80:0,79,1:0:0:79,1:2819,36:-253.044,-23.7814,0,-250.192,-20.5797,-249.891	1/2:71:0,53,18:0:0:53,18:1882,640:-204.406,-51.0523,-35.0977,-153.703,0,-148.284	1/1:268:0,268,0:0:0:268,0:9489,0:-853.58,-80.676,0,-853.58,-80.676,-853.58	1/2:175:0,101,74:0:0:101,74:3566,2588:-495.294,-204.918,-174.514,-290.721,0,-268.445	1/2:28:0,14,14:0:0:14,14:487,485:-78.2842,-38.6822,-34.4678,-39.9448,0,-35.7304	1/1:249:0,248,0:0:0:248,0:8751,0:-787.008,-74.6554,0,-787.008,-74.6554,-787.008	1/2:125:0,87,37:0:0:87,37:3081,1310:-354.279,-103.408,-77.2184,-250.937,0,-239.799	1/1:88:0,88,0:0:0:88,0:3131,0:-281.96,-26.4906,0,-281.96,-26.4906,-281.96	1/1:6:0,6,0:0:0:6,0:208,0:-19.0591,-1.80618,0,-19.0591,-1.80618,-19.0591	1/2:19:0,16,3:0:0:16,3:546,104:-52.8895,-8.58334,-3.76686,-44.6453,0,-43.7422	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:10:0,10,0:0:0:10,0:356,0:-32.3812,-3.0103,0,-32.3812,-3.0103,-32.3812	1/2:21:0,10,11:0:0:10,11:351,379:-58.5238,-29.9496,-26.9393,-28.9164,0,-25.605	1/1:176:0,175,0:0:0:175,0:6158,0:-553.82,-52.6803,0,-553.82,-52.6803,-553.82	1/2:108:0,69,39:0:0:69,39:2443,1354:-306.379,-107.368,-86.5969,-199.355,0,-187.614	1/2:33:0,24,9:0:0:24,9:864,307:-94.8398,-24.3198,-17.0951,-70.8578,0,-68.1486	1/2:6:0,5,1:0:0:5,1:176,36:-16.73,-3.20167,-1.69652,-13.8759,0,-13.5749	1/1:115:0,112,1:0:0:112,1:3934,32:-353.911,-33.7154,0,-351.369,-31.1872,-351.068	1/1:28:0,28,0:0:0:28,0:993,0:-89.5702,-8.42884,0,-89.5702,-8.42884,-89.5702	1/2:187:0,117,70:0:0:117,70:4136,2414:-526.405,-189.876,-154.656,-336.87,0,-315.798	1/2:31:0,22,9:0:0:22,9:777,309:-88.2621,-24.9765,-18.3538,-63.6277,0,-60.9184	1/1:37:0,37,0:0:0:37,0:1324,0:-119.448,-11.1381,0,-119.448,-11.1381,-119.448	1/2:117:0,80,37:0:0:80,37:2797,1303:-332.704,-105.245,-81.1622,-227.809,0,-216.67	1/1:162:0,161,1:0:0:161,1:5668,36:-509.884,-48.4658,0,-506.946,-45.1686,-506.645	1/1:136:0,135,0:0:0:135,0:4760,0:-428.068,-40.6391,0,-428.068,-40.6391,-428.068	1/2:50:0,34,16:0:0:34,16:1181,550:-139.651,-44.1752,-33.9402,-95.8165,0,-91	1/2:80:0,48,31:0:0:48,31:1696,1104:-226.289,-88.2031,-73.7537,-138.077,0,-128.745	1/2:138:0,95,43:0:0:95,43:3388,1508:-397.93,-121.741,-93.1434,-276.539,0,-263.594	1/2:6:0,3,3:0:0:3,3:108,108:-17.8134,-8.99805,-8.09496,-9.17208,0,-8.26899	1/2:120:0,72,48:0:0:72,48:2588,1693:-342.061,-130.934,-109.26,-211.472,0,-197.022	1/2:17:0,10,7:0:0:10,7:356,243:-48.8826,-19.878,-16.8677,-29.3532,0,-27.246	1/1:12:0,12,0:0:0:12,0:395,0:-35.8656,-3.61236,0,-35.8656,-3.61236,-35.8656	1/1:99:0,98,0:0:0:98,0:3454,0:-310.544,-29.5009,0,-310.544,-29.5009,-310.544	1/2:25:0,13,12:0:0:13,12:456,416:-70.7276,-33.6136,-29.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chr11	5786	.	C	T	198994	PASS	AB=0.500526;ABP=3.03085;AC=134;AF=0.712766;AN=188;AO=9811;CIGAR=1X;DP=14098;DPB=14098;DPRA=0;EPP=21307.3;EPPR=9307.77;GTI=0;LEN=1;MEANALT=1.02128;MQM=54.2262;MQMR=59.5167;NS=94;NUMALT=1;ODDS=3.21973;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=350163;QR=153406;RO=4285;RPL=0;RPP=21307.3;RPPR=9307.77;RPR=9811;RUN=1;SAF=9811;SAP=21307.3;SAR=0;SRF=4285;SRP=9307.77;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:60:30,30:30:1076:30:1075:-78.3251,0,-79.0829	0/1:250:121,129:121:4340:129:4609:-337.776,0,-315.361	0/1:287:148,139:148:5292:139:4974:-358.784,0,-389.448	0/1:373:191,182:191:6853:182:6490:-471.373,0,-504.439	1/1:137:0,137:0:0:137:4913:-440.854,-41.2411,0	1/1:75:0,75:0:0:75:2662:-238.977,-22.5773,0	0/1:381:184,197:184:6570:197:7022:-516.223,0,-476.66	0/1:233:97,136:97:3458:136:4824:-362.923,0,-241.03	0/1:86:39,47:39:1395:47:1662:-123.425,0,-99.9416	0/1:105:59,46:59:2112:46:1643:-115.791,0,-158.641	1/1:93:0,93:0:0:93:3344:-300.53,-27.9958,0	1/1:80:0,80:0:0:80:2864:-257.365,-24.0824,0	1/1:50:0,50:0:0:50:1792:-160.143,-15.0515,0	0/1:88:48,40:48:1728:40:1432:-102.251,0,-129.272	1/1:49:0,49:0:0:49:1751:-157.648,-14.7505,0	1/1:54:0,54:0:0:54:1940:-174.558,-16.2556,0	0/1:108:53,55:53:1904:55:1968:-144.45,0,-138.18	1/1:51:0,51:0:0:51:1821:-163.034,-15.3525,0	0/1:52:30,22:30:1080:22:764:-53.2299,0,-81.8515	0/1:608:308,300:308:11040:300:10752:-782.641,0,-810.369	0/1:256:139,117:139:4984:117:4095:-290.25,0,-371.495	0/1:211:112,99:112:4020:99:3545:-255.531,0,-298.268	0/1:44:21,23:21:752:23:813:-60.1919,0,-54.7609	0/1:149:62,87:62:2216:87:3105:-234.053,0,-154.818	1/1:109:0,109:0:0:109:3886:-348.531,-32.8123,0	0/1:432:209,223:209:7446:223:7932:-582.85,0,-539.921	1/1:284:0,284:0:0:284:10070:-901.393,-85.4925,0	1/1:41:0,41:0:0:41:1457:-130.659,-12.3422,0	1/1:496:0,496:0:0:496:17742:-1594.28,-149.311,0	0/1:159:84,75:84:3008:75:2663:-191.679,0,-223.043	1/1:140:0,140:0:0:140:4994:-448.97,-42.1442,0	1/1:33:0,33:0:0:33:1188:-107.073,-9.93399,0	1/1:31:0,31:0:0:31:1112:-100.042,-9.33193,0	1/1:8:0,8:0:0:8:288:-26.2014,-2.40824,0	1/1:18:0,18:0:0:18:644:-58.148,-5.41854,0	1/1:30:0,30:0:0:30:1050:-94.2881,-9.0309,0	0/1:187:97,90:97:3471:90:3236:-234.976,0,-256.294	1/1:212:0,211:0:0:211:7510:-672.907,-63.5173,0	1/1:118:0,118:0:0:118:4222:-378.634,-35.5215,0	0/1:9:3,6:3:108:6:197:-15.1942,0,-7.3659	0/1:255:116,139:116:4152:139:4981:-370.753,0,-296.804	1/1:41:0,41:0:0:41:1472:-132.321,-12.3422,0	1/1:239:0,239:0:0:239:8464:-759.376,-71.9462,0	1/1:69:0,69:0:0:69:2476:-222.497,-20.7711,0	0/1:65:27,38:27:968:38:1368:-103.67,0,-67.8634	0/1:118:59,59:59:2120:59:2124:-155.735,0,-155.342	0/1:208:110,98:110:3952:98:3520:-252.549,0,-293.207	1/1:375:6,369:6:216:369:13156:-1162.09,-93.0957,0	0/1:199:107,92:107:3848:92:3308:-237.478,0,-286.507	0/1:253:114,139:114:4057:139:4969:-369.807,0,-289.13	0/1:299:136,163:136:4856:163:5835:-434.731,0,-346.847	0/1:38:17,21:17:612:21:756:-56.6882,0,-43.3442	0/1:264:123,141:123:4401:141:5049:-373.586,0,-316.638	0/1:54:27,27:27:972:27:953:-69.7866,0,-71.3027	1/1:30:0,30:0:0:30:1080:-97.2065,-9.0309,0	0/1:268:141,127:141:5064:127:4553:-328.039,0,-374.747	1/1:47:0,47:0:0:47:1669:-150.35,-14.1484,0	0/1:16:9,7:9:320:7:252:-18.0129,0,-24.3259	0/1:52:25,27:25:900:27:972:-71.846,0,-65.6675	1/1:142:1,141:1:36:141:4961:-441.458,-39.148,0	0/1:119:52,67:52:1872:67:2388:-179.102,0,-132.929	0/1:22:14,8:14:496:8:288:-19.4561,0,-38.3446	1/1:312:1,311:1:36:311:11142:-998.043,-90.3231,0	0/1:287:147,140:147:5261:140:4993:-362.221,0,-387.191	0/1:116:56,59:56:2004:59:2105:-154.369,0,-145.781	1/1:191:0,191:0:0:191:6823:-613.049,-57.4967,0	0/1:190:88,102:88:3141:102:3637:-269.844,0,-225.578	0/1:183:130,53:130:4632:53:1893:-115.39,0,-361.701	0/1:52:24,28:24:856:28:1000:-74.5333,0,-61.6699	1/1:138:0,138:0:0:138:4936:-442.403,-41.5421,0	0/1:67:32,35:32:1148:35:1252:-92.3018,0,-83.4201	0/1:59:23,36:23:820:36:1292:-98.2632,0,-56.3617	0/1:181:103,78:103:3692:78:2781:-194.788,0,-277.933	0/1:118:52,66:52:1872:66:2341:-173.782,0,-133.187	0/1:253:113,140:113:4045:140:4917:-364.924,0,-288.06	1/1:294:0,294:0:0:294:10563:-947.862,-88.5028,0	1/1:231:0,231:0:0:231:8255:-738.665,-69.5379,0	1/1:179:2,177:2:72:177:6337:-561.986,-47.0476,0	0/1:12:9,3:9:324:3:108:-6.43748,0,-25.8926	0/1:182:83,99:83:2964:99:3545:-263.628,0,-212.188	1/1:227:0,227:0:0:227:8054:-722.114,-68.3338,0	1/1:457:0,457:0:0:457:16287:-1463.01,-137.571,0	0/1:99:49,50:49:1752:50:1792:-130.789,0,-128.068	0/1:57:34,23:34:1220:23:828:-57.5337,0,-92.9434	0/1:66:32,34:32:1152:34:1220:-89.9364,0,-84.1213	1/1:95:0,95:0:0:95:3412:-306.382,-28.5979,0	1/1:26:0,26:0:0:26:936:-84.3469,-7.82678,0	0/1:64:38,26:38:1353:26:936:-64.8987,0,-102.777	0/1:72:42,30:42:1504:30:1065:-74.0744,0,-113.977	1/1:90:0,90:0:0:90:3221:-289.478,-27.0927,0	0/1:142:74,68:74:2655:68:2425:-175.013,0,-196.364	0/1:53:34,19:34:1208:19:672:-44.4393,0,-92.6437	1/1:164:0,164:0:0:164:5834:-524.054,-49.3689,0	1/1:81:0,81:0:0:81:2916:-262.204,-24.3834,0
chr11	5842	.	T	A	93321.4	PASS	AB=0.496286;ABP=4.10719;AC=54;AF=0.287234;AN=188;AO=4549;CIGAR=1X;DP=14786;DPB=14786;DPRA=1.75567;EPP=9881.04;EPPR=22204.2;GTI=0;LEN=1;MEANALT=1.01724;MQM=59.9433;MQMR=59.6038;NS=94;NUMALT=1;ODDS=0.0994003;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=162418;QR=366605;RO=10236;RPL=683;RPP=4839.29;RPPR=11110.6;RPR=3866;RUN=1;SAF=683;SAP=4839.29;SAR=3866;SRF=1499;SRP=11116.8;SRR=8737;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:86:38,48:38:1368:48:1702:-127.577,0,-97.5322	0/1:194:119,75:119:4260:75:2688:-183.765,0,-325.179	0/1:172:89,83:89:3165:83:2952:-214.135,0,-233.297	0/1:316:178,138:178:6385:138:4934:-349.085,0,-479.61	0/0:89:89,0:89:3196:0:0:0,-26.7917,-287.863	0/0:112:112,0:112:4012:0:0:0,-33.7154,-361.269	0/1:300:152,148:152:5448:148:5298:-386.644,0,-400.139	0/1:196:92,104:92:3304:104:3738:-277.617,0,-238.576	0/1:152:90,62:90:3236:62:2182:-150.886,0,-245.704	0/1:147:98,49:98:3486:49:1760:-114.424,0,-269.698	0/0:69:69,0:69:2454:0:0:0,-20.7711,-221.111	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.616	0/0:70:70,0:70:2504:0:0:0,-21.0721,-225.613	0/1:65:28,37:28:1000:37:1309:-98.5426,0,-70.7484	0/0:77:77,0:77:2745:0:0:0,-23.1793,-247.291	0/0:43:43,0:43:1539:0:0:0,-12.9443,-138.802	0/1:72:37,35:37:1332:35:1256:-91.6711,0,-98.5082	0/0:59:59,0:59:2120:0:0:0,-17.7608,-191.068	0/1:67:33,34:33:1188:34:1220:-89.9378,0,-87.0596	0/1:396:194,202:194:6964:202:7236:-532.076,0,-507.614	0/1:226:111,115:111:3961:115:4112:-302.232,0,-288.648	0/1:400:156,244:156:5588:244:8695:-662.065,0,-382.433	0/1:54:28,26:28:978:26:932:-67.9432,0,-72.073	0/1:233:109,124:109:3905:124:4414:-327.293,0,-281.501	0/0:152:152,0:152:5417:0:0:0,-45.7566,-487.661	0/1:813:433,380:433:15516:380:13528:-972.553,0,-1150.2	0/0:288:288,0:288:10300:0:0:0,-86.6966,-926.896	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:911:910,1:910:32575:1:36:0,-270.64,-2925.21	0/1:184:93,91:93:3325:91:3251:-237.421,0,-244.077	0/0:171:171,0:171:6094:0:0:0,-51.4761,-548.561	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:7:7,0:7:237:0:0:0,-2.10721,-21.6591	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:404:204,200:204:7315:200:7148:-521.749,0,-536.597	0/0:151:151,0:151:5378:0:0:0,-45.4555,-484.151	0/0:86:86,0:86:3096:0:0:0,-25.8886,-278.866	0/1:12:7,5:7:252:5:180:-12.9397,0,-19.4166	0/1:234:115,119:115:4121:119:4268:-313.856,0,-300.631	0/0:58:58,0:58:2073:0:0:0,-17.4597,-186.839	0/0:223:223,0:223:7993:0:0:0,-67.1297,-719.388	0/0:73:73,0:73:2624:0:0:0,-21.9752,-236.407	0/1:59:27,31:27:972:31:1116:-82.9321,0,-69.9783	0/1:226:120,106:120:4292:106:3796:-273.629,0,-318.267	0/1:135:77,58:77:2752:58:2057:-144.761,0,-207.283	0/0:263:260,3:260:9317:3:108:0,-69.0957,-828.148	0/1:152:90,62:90:3236:62:2209:-153.317,0,-245.704	0/1:147:78,69:78:2808:69:2457:-177.132,0,-208.707	0/1:589:311,278:311:11148:278:9911:-714.613,0,-825.049	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:225:110,115:110:3924:115:4113:-302.621,0,-285.622	0/1:114:49,65:49:1737:65:2329:-175.443,0,-122.26	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:218:99,119:99:3540:119:4272:-319.032,0,-253.185	0/0:70:70,0:70:2490:0:0:0,-21.0721,-224.35	0/1:38:22,16:22:788:16:576:-40.7358,0,-59.6087	0/1:76:34,42:34:1200:42:1500:-112.416,0,-85.3309	0/0:87:87,0:87:3101:0:0:0,-26.1896,-279.316	0/1:128:58,70:58:2084:70:2516:-188.16,0,-149.298	0/1:28:9,19:9:320:19:669:-52.1051,0,-20.7135	0/0:485:484,1:484:17319:1:36:0,-142.401,-1553.59	0/1:274:138,136:138:4952:136:4876:-356.509,0,-363.346	0/1:143:59,84:59:2124:84:2971:-224.573,0,-148.381	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03	0/1:185:96,89:96:3421:89:3168:-229.654,0,-252.413	0/1:167:72,95:72:2592:95:3397:-255.671,0,-183.256	0/1:34:21,13:21:756:13:464:-31.8625,0,-58.1322	0/0:93:93,0:93:3333:0:0:0,-27.9958,-300.185	0/1:147:66,81:66:2368:81:2895:-216.494,0,-168.655	0/1:15:10,5:10:360:5:171:-11.21,0,-28.2289	0/1:260:141,119:141:5064:119:4257:-305.034,0,-377.635	0/1:85:36,49:36:1284:49:1749:-132.106,0,-90.2759	0/1:256:138,118:138:4937:118:4201:-301.21,0,-367.415	0/0:217:217,0:217:7796:0:0:0,-65.3235,-701.665	0/0:220:220,0:220:7874:0:0:0,-66.2266,-708.683	0/0:171:171,0:171:6125:0:0:0,-51.4761,-551.348	0/1:16:7,9:7:252:9:309:-23.3242,0,-18.2125	0/1:137:70,67:70:2512:67:2374:-172.675,0,-185.091	0/0:166:166,0:166:5960:0:0:0,-49.971,-536.505	0/0:443:443,0:443:15932:0:0:0,-133.356,-1432.92	0/1:98:45,53:45:1605:53:1887:-140.606,0,-115.237	0/1:53:21,32:21:756:32:1152:-88.0356,0,-52.4126	0/1:70:32,38:32:1152:38:1360:-101.628,0,-82.918	0/0:152:152,0:152:5456:0:0:0,-45.7566,-491.167	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.236	0/1:80:40,40:40:1432:40:1421:-104.103,0,-105.095	0/1:81:42,39:42:1508:39:1400:-101.916,0,-111.631	0/0:44:44,0:44:1576:0:0:0,-13.2453,-142.132	0/1:124:66,58:66:2355:58:2062:-148.522,0,-174.881	0/1:65:21,44:21:752:44:1584:-123.285,0,-48.4393	0/0:134:134,0:134:4801:0:0:0,-40.338,-432.243	0/0:111:110,1:110:3940:1:36:0,-29.8161,-351.194
chr11	228527	.	T	C	229830	PASS	AB=0.515317;ABP=43.7207;AC=54;AF=0.287234;AN=188;AO=10312;CIGAR=1X;DP=35871;DPB=35871;DPRA=1.16607;EPP=22360.5;EPPR=55334.4;GTI=0;LEN=1;MEANALT=1.06349;MQM=59.8767;MQMR=59.9658;NS=94;NUMALT=1;ODDS=7.90348;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=363351;QR=909686;RO=25553;RPL=6838;RPP=2386.01;RPPR=10134.6;RPR=3474;RUN=1;SAF=6834;SAP=2374.69;SAR=3478;SRF=18222;SRP=10082.7;SRR=7331;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:79:38,41:38:1341:41:1411:-103.483,0,-97.2067	0/1:434:226,208:226:8008:208:7371:-532.789,0,-589.941	0/1:258:125,133:125:4461:133:4669:-342.652,0,-323.994	0/1:597:268,328:268:9540:328:11521:-857.019,0,-678.9	0/0:162:162,0:162:5776:0:0:0,-48.7669,-519.303	0/0:152:152,0:152:5402:0:0:0,-45.7566,-486.303	0/1:396:167,229:167:5952:229:8143:-613.684,0,-416.58	0/1:240:112,128:112:3991:128:4534:-335.97,0,-287.12	0/1:205:114,91:114:4065:91:3162:-223.034,0,-304.325	0/1:250:105,145:105:3718:145:5084:-382.443,0,-259.519	0/0:720:720,0:720:25733:0:0:0,-216.742,-2314.05	0/0:195:195,0:195:6906:0:0:0,-58.7008,-621.504	0/0:197:197,0:197:6962:0:0:0,-59.3029,-626.547	0/1:203:99,104:99:3518:104:3678:-270.117,0,-255.711	0/0:151:151,0:151:5396:0:0:0,-45.4555,-485.751	0/0:212:211,0:211:7530:0:0:0,-63.5173,-677.383	0/1:160:74,86:74:2638:86:3043:-225.927,0,-189.501	0/0:172:172,0:172:6140:0:0:0,-51.7772,-552.685	0/1:363:185,178:185:6587:178:6274:-455.485,0,-483.638	0/1:506:245,261:245:8714:261:9238:-679.025,0,-631.933	0/1:374:171,203:171:6099:203:7163:-532.074,0,-436.428	0/1:172:51,121:51:1820:121:4257:-331.522,0,-112.304	0/1:208:107,101:107:3791:101:3573:-259.145,0,-278.774	0/1:278:131,147:131:4676:147:5119:-377.166,0,-337.276	0/0:186:186,0:186:6613:0:0:0,-55.9916,-595.251	0/1:687:358,329:358:12732:329:11578:-835.085,0,-938.9	0/0:718:718,0:718:25469:0:0:0,-216.14,-2291.51	0/0:74:74,0:74:2631:0:0:0,-22.2762,-237.037	0/0:625:625,0:625:22255:0:0:0,-188.144,-2002.32	0/1:269:132,137:132:4716:137:4833:-354.148,0,-343.622	0/0:304:304,0:304:10813:0:0:0,-91.5131,-973.079	0/0:1001:999,2:999:35629:2:72:0,-294.494,-3198.62	0/0:795:795,0:795:28369:0:0:0,-239.319,-2552.19	0/0:905:905,0:905:32313:0:0:0,-272.432,-2907.16	0/0:1676:1674,2:1674:59556:2:72:0,-497.69,-5351.08	0/0:738:736,1:736:26293:1:36:0,-218.621,-2361.98	0/1:466:251,215:251:8935:215:7483:-533.252,0,-663.853	0/0:344:343,1:343:12226:1:36:0,-99.956,-1096.31	0/0:710:709,0:709:25210:0:0:0,-213.43,-2268	0/1:482:278,204:278:9910:204:7226:-505.229,0,-746.744	0/1:388:197,191:197:6985:191:6766:-492.127,0,-511.912	0/0:308:308,0:308:11016:0:0:0,-92.7172,-991.332	0/0:299:299,0:299:10599:0:0:0,-90.008,-953.829	0/0:179:179,0:179:6325:0:0:0,-53.8844,-569.303	0/1:161:78,83:78:2751:83:2834:-206.79,0,-199.368	0/1:256:132,124:132:4686:124:4370:-316.413,0,-344.837	0/1:136:72,64:72:2573:64:2267:-163.349,0,-190.878	0/0:410:406,4:406:14468:4:144:0,-110.155,-1288.61	0/1:256:122,134:122:4336:134:4752:-350.615,0,-313.352	0/1:336:175,161:175:6217:161:5730:-414.666,0,-458.482	0/1:226:96,129:96:3403:129:4569:-343.429,0,-238.541	0/1:914:457,457:457:16218:457:16145:-1177.6,0,-1184.16	0/1:282:141,141:141:5027:141:5002:-365.422,0,-367.652	0/1:112:58,54:58:2062:54:1901:-137.648,0,-152.13	0/0:807:807,0:807:28808:0:0:0,-242.931,-2591.85	0/1:380:160,219:160:5679:219:7688:-577.589,0,-396.872	0/0:81:79,2:79:2804:2:72:0,-17.5467,-245.762	0/1:700:379,321:379:13578:321:11414:-816.419,0,-1011.08	0/1:901:398,503:398:14238:503:17861:-1335.84,0,-1009.95	0/0:220:220,0:220:7822:0:0:0,-66.2266,-704.014	0/1:237:121,116:121:4269:116:4071:-294.864,0,-313.046	0/1:569:283,286:283:10099:286:10083:-736.127,0,-737.556	0/0:166:166,0:166:5936:0:0:0,-49.971,-534.349	0/1:433:170,263:170:6076:263:9244:-701.394,0,-416.594	0/1:150:70,80:70:2470:80:2798:-206.875,0,-177.397	0/0:207:207,0:207:7366:0:0:0,-62.3132,-662.789	0/1:417:187,230:187:6633:230:8041:-598.09,0,-471.521	0/1:181:55,126:55:1953:126:4416:-343.125,0,-121.557	0/1:529:280,249:280:9984:249:8788:-631.668,0,-739.254	0/0:140:140,0:140:4941:0:0:0,-42.1442,-444.844	0/1:204:102,102:102:3626:102:3610:-263.695,0,-265.136	0/1:902:436,466:436:15567:466:16423:-1206.19,0,-1129.2	0/1:237:124,113:124:4391:113:4001:-288.931,0,-324.021	0/1:152:68,84:68:2404:84:2968:-221.595,0,-170.859	0/1:596:304,292:304:10799:292:10212:-739.582,0,-792.088	0/0:367:364,3:364:12939:3:108:0,-100.403,-1154.25	0/0:298:297,1:297:10527:1:27:0,-87.0072,-944.627	0/0:269:269,0:269:9592:0:0:0,-80.9771,-863.238	0/1:949:434,515:434:15531:515:18194:-1351.4,0,-1111.7	0/1:264:138,126:138:4924:126:4470:-322.999,0,-363.84	0/0:262:262,0:262:9304:0:0:0,-78.8699,-837.33	0/0:493:493,0:493:17522:0:0:0,-148.408,-1576.61	0/1:263:132,131:132:4667:131:4602:-333.989,0,-341.024	0/1:150:73,77:73:2612:77:2688:-197.004,0,-189.877	0/1:202:103,99:103:3655:99:3397:-245.136,0,-268.323	0/0:333:332,1:332:11756:1:36:0,-96.6447,-1054.3	0/0:94:94,0:94:3281:0:0:0,-28.2968,-295.509	0/1:209:113,96:113:3990:96:3301:-234.387,0,-296.373	0/1:168:87,81:87:3111:81:2787:-200.493,0,-229.643	0/0:650:650,0:650:23210:0:0:0,-195.669,-2088.17	0/1:1293:641,652:641:22864:652:23001:-1680.25,0,-1667.93	0/1:198:57,141:57:2036:141:4994:-390.006,0,-123.908	0/0:4:4,0:4:125:0:0:0,-1.20412,-11.5586	0/0:269:269,0:269:9497:0:0:0,-80.9771,-854.692
chr11	354267	.	CATT	TATT,TATC	200116	PASS	AB=0.513661,0.483342;ABP=12.2064,16.6833;AC=135,53;AF=0.718085,0.281915;AN=188;AO=7533,2748;CIGAR=1X3M,1X2M1X;DP=10313;DPB=10313;DPRA=0,1.1033;EPP=16360.7,5970.22;EPPR=18.2106;GTI=1;LEN=1,4;MEANALT=1.87234,2.2931;MQM=59.7101,28.5626;MQMR=58.1429;NS=94;NUMALT=2;ODDS=4.13342;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=269588,97568;QR=251;RO=7;RPL=0,0;RPP=16360.7,5970.22;RPPR=18.2106;RPR=7533,2748;RUN=1,1;SAF=7533,2748;SAP=16360.7,5970.22;SAR=0,0;SRF=7;SRP=18.2106;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:76:0,51,25:0:0:51,25:1828,862:-198.456,-49.3188,-33.9662,-149.424,0,-141.898	1/2:73:0,46,27:0:0:46,27:1644,946:-187.653,-53.5572,-39.7098,-134.387,0,-126.26	1/2:237:0,107,129:0:0:107,129:3820,4575:-567.571,-256.117,-223.906,-311.519,0,-272.686	1/2:213:0,142,71:0:0:142,71:5071,2497:-574.414,-160.953,-118.206,-413.77,0,-392.397	1/1:123:0,123,0:0:0:123,0:4418,0:-397.467,-37.0267,0,-397.467,-37.0267,-397.467	1/1:78:0,78,0:0:0:78,0:2778,0:-250.248,-23.4803,0,-250.248,-23.4803,-250.248	1/2:125:0,70,55:0:0:70,55:2493,1966:-329.879,-126.656,-105.584,-203.541,0,-186.984	1/2:236:0,111,125:0:0:111,125:3988,4415:-573.33,-248.022,-214.608,-325.617,0,-287.988	1/2:127:0,72,55:0:0:72,55:2580,1966:-319.464,-109.202,-87.5275,-210.561,0,-194.004	1/2:95:0,36,59:0:0:36,59:1296,2102:-241.36,-135.588,-124.751,-106.105,0,-88.3437	1/1:97:0,96,0:0:0:96,0:3426,0:-308.19,-28.8989,0,-308.19,-28.8989,-308.19	1/1:121:1,120,0:1:36:120,0:4300,0:-383.521,-32.8264,0,-383.822,-36.1236,-386.76	1/1:93:0,93,0:0:0:93,0:3332,0:-300.073,-27.9958,0,-300.073,-27.9958,-300.073	1/2:83:0,58,25:0:0:58,25:2070,899:-223.102,-54.2988,-36.839,-169.102,0,-161.576	1/1:65:0,65,0:0:0:65,0:2340,0:-210.847,-19.567,0,-210.847,-19.567,-210.847	1/1:78:0,78,0:0:0:78,0:2799,0:-252.144,-23.4803,0,-252.144,-23.4803,-252.144	1/2:49:0,27,22:0:0:27,22:968,776:-122.828,-43.8274,-35.6996,-79.301,0,-72.6784	1/1:50:0,50,0:0:0:50,0:1788,0:-161.191,-15.0515,0,-161.191,-15.0515,-161.191	1/2:39:0,18,21:0:0:18,21:648,751:-94.9985,-42.0765,-36.658,-53.2333,0,-46.9117	1/2:177:0,111,65:0:0:111,65:3960,2321:-471.811,-148.957,-115.543,-322.916,0,-303.349	1/2:206:0,103,102:0:0:103,102:3684,3613:-519.238,-218.8,-187.794,-300.472,0,-269.767	1/2:82:0,36,44:0:0:36,44:1282,1542:-206.806,-102.312,-91.4748,-104.613,0,-91.3672	1/2:143:0,90,53:0:0:90,53:3223,1878:-384.291,-121.411,-94.3186,-263.193,0,-247.239	1/2:73:0,39,34:0:0:39,34:1400,1205:-187.302,-73.0564,-61.3163,-114.557,0,-104.322	1/1:110:0,110,0:0:0:110,0:3941,0:-354.862,-33.1133,0,-354.862,-33.1133,-354.862	1/2:251:0,135,116:0:0:135,116:4834,4137:-672.596,-278.351,-237.712,-394.572,0,-359.652	1/1:361:0,361,0:0:0:361,0:12944,0:-1164.59,-108.672,0,-1164.59,-108.672,-1164.59	1/1:20:0,20,0:0:0:20,0:720,0:-65.1149,-6.0206,0,-65.1149,-6.0206,-65.1149	1/1:435:0,435,0:0:0:435,0:15576,0:-1401.52,-130.948,0,-1401.52,-130.948,-1401.52	1/2:123:0,77,46:0:0:77,46:2737,1651:-322.701,-99.634,-76.4547,-223.371,0,-209.524	1/1:128:0,127,1:0:0:127,1:4531,36:-407.653,-38.2308,0,-405.342,-35.6291,-405.041	1/1:8:0,8,0:0:0:8,0:288,0:-26.2674,-2.40824,0,-26.2674,-2.40824,-26.2674	1/1:36:0,36,0:0:0:36,0:1283,0:-115.768,-10.8371,0,-115.768,-10.8371,-115.768	1/1:4:0,4,0:0:0:4,0:136,0:-12.5736,-1.20412,0,-12.5736,-1.20412,-12.5736	1/1:14:0,14,0:0:0:14,0:504,0:-45.6981,-4.21442,0,-45.6981,-4.21442,-45.6981	1/1:44:0,42,0:0:0:42,0:1500,0:-135.005,-12.6433,0,-135.005,-12.6433,-135.005	1/2:179:0,93,85:0:0:93,85:3324,3045:-475.409,-204.414,-176.418,-271.023,0,-245.435	1/1:117:0,117,0:0:0:117,0:4208,0:-378.814,-35.2205,0,-378.814,-35.2205,-378.814	1/1:49:0,49,0:0:0:49,0:1760,0:-158.676,-14.7505,0,-158.676,-14.7505,-158.676	1/2:7:0,6,1:0:0:6,1:216,36:-19.9713,-2.25768,-0.451496,-17.9843,0,-17.6833	1/2:187:0,114,73:0:0:114,73:4092,2578:-489.655,-155.97,-121.653,-333.99,0,-312.015	1/1:58:0,58,0:0:0:58,0:2060,0:-185.659,-17.4597,0,-185.659,-17.4597,-185.659	1/1:298:1,296,1:1:35:296,1:10612,36:-951.377,-86.2619,0,-948.745,-86.1673,-951.292	1/1:62:0,61,1:0:0:61,1:2173,36:-195.471,-18.3628,0,-192.535,-15.0682,-192.234	1/2:45:0,21,24:0:0:21,24:752,848:-116.247,-54.8887,-48.5671,-61.6823,0,-54.4576	1/2:94:1,51,42:1:36:51,42:1832,1500:-246.77,-97.5888,-85.1751,-146.511,0,-136.805	1/2:117:0,56,59:0:0:56,59:2016,2108:-281.679,-117.136,-100.279,-164.594,0,-146.833	1/1:257:0,254,1:0:0:254,1:9067,36:-815.171,-76.4616,0,-812.86,-74.1301,-812.559	1/2:80:0,38,42:0:0:38,42:1360,1491:-206.766,-95.8288,-84.3896,-111.261,0,-98.6182	1/2:122:0,55,67:0:0:55,67:1953,2386:-312.386,-153.235,-136.678,-159.475,0,-139.306	1/2:83:0,53,30:0:0:53,30:1898,1072:-226.425,-71.6023,-55.6477,-155.142,0,-146.111	1/2:4:0,1,3:0:0:1,3:36,108:-10.1795,-7.22465,-6.92362,-3.29724,0,-2.39415	1/2:112:0,54,58:0:0:54,58:1935,2059:-272.399,-114.539,-98.2829,-158.168,0,-140.708	1/2:81:0,50,30:0:0:50,30:1783,1055:-215.526,-70.1444,-55.0929,-145.417,0,-136.386	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/2:140:0,53,87:0:0:53,87:1904,3079:-341.979,-186.631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chr11	354277	.	ATCA	TTCA,TTCT	194953	PASS	AB=0.506798,0.489267;ABP=5.25403,8.60408;AC=135,53;AF=0.718085,0.281915;AN=188;AO=7336,2739;CIGAR=1X3M,1X2M1X;DP=10133;DPB=10133;DPRA=0,1.0443;EPP=15932.9,5950.67;EPPR=35.5824;GTI=1;LEN=1,4;MEANALT=2.01064,2.35714;MQM=59.7612,28.5476;MQMR=58.9333;NS=94;NUMALT=2;ODDS=5.67601;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=262179,96145;QR=460;RO=15;RPL=0,0;RPP=15932.9,5950.67;RPPR=35.5824;RPR=7336,2739;RUN=1,1;SAF=7336,2739;SAP=15932.9,5950.67;SAR=0,0;SRF=15;SRP=35.5824;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:75:0,50,25:0:0:50,25:1775,859:-193.686,-49.0147,-33.9632,-144.956,0,-137.431	1/2:69:0,43,26:0:0:43,26:1540,897:-176.809,-51.1571,-38.2128,-125.943,0,-118.116	1/2:236:0,107,128:0:0:107,128:3840,4519:-566.752,-253.49,-221.28,-313.215,0,-274.683	1/2:208:0,138,70:0:0:138,70:4919,2462:-559.656,-158.664,-117.122,-401.301,0,-380.229	1/1:118:0,117,0:0:0:117,0:4202,0:-377.79,-35.2205,0,-377.79,-35.2205,-377.79	1/1:75:0,75,0:0:0:75,0:2680,0:-241.42,-22.5773,0,-241.42,-22.5773,-241.42	1/2:123:0,67,55:0:0:67,55:2404,1941:-321.349,-125.255,-105.086,-196.055,0,-179.498	1/2:231:0,107,124:0:0:107,124:3796,4334:-554.025,-244.773,-212.563,-309.559,0,-272.232	1/2:124:1,68,55:1:36:68,55:2439,1942:-304.161,-105.492,-87.9616,-195.973,0,-182.353	1/2:96:0,37,59:0:0:37,59:1332,2099:-244.451,-135.741,-124.603,-109.042,0,-91.2812	1/1:97:0,97,0:0:0:97,0:3472,0:-312.669,-29.1999,0,-312.669,-29.1999,-312.669	1/1:123:1,120,0:1:30:120,0:4291,0:-383.288,-33.7449,0,-383.589,-36.1236,-385.987	1/1:90:0,90,0:0:0:90,0:3215,0:-289.547,-27.0927,0,-289.547,-27.0927,-289.547	1/2:81:0,55,25:0:0:55,25:1964,877:-213.651,-53.4767,-36.9201,-160.116,0,-152.591	1/1:64:0,64,0:0:0:64,0:2300,0:-207.249,-19.2659,0,-207.249,-19.2659,-207.249	1/1:78:0,78,0:0:0:78,0:2808,0:-252.954,-23.4803,0,-252.954,-23.4803,-252.954	1/2:49:0,27,22:0:0:27,22:955,790:-121.853,-44.0242,-35.8964,-78.128,0,-71.5053	1/1:51:0,50,0:0:0:50,0:1792,0:-161.302,-15.0515,0,-161.302,-15.0515,-161.302	1/2:40:0,19,21:0:0:19,21:662,740:-95.8113,-41.9319,-36.2124,-54.1828,0,-47.8612	1/2:173:0,108,65:0:0:108,65:3853,2289:-462.142,-148.009,-115.497,-314.446,0,-294.879	1/2:209:1,106,101:1:29:106,101:3780,3544:-520.789,-212.916,-183.315,-305.904,0,-277.807	1/2:83:0,36,47:0:0:36,47:1269,1637:-210.131,-106.786,-95.9485,-103.668,0,-89.5197	1/2:138:0,85,53:0:0:85,53:3047,1867:-369.65,-121.095,-95.5079,-248.869,0,-232.914	1/2:74:0,40,34:0:0:40,34:1425,1204:-189.202,-73.0078,-60.9666,-116.505,0,-106.27	1/1:111:0,111,0:0:0:111,0:3952,0:-355.855,-33.4143,0,-355.855,-33.4143,-355.855	1/2:246:0,131,114:0:0:131,114:4678,4024:-653.062,-271.645,-232.21,-381.553,0,-347.235	1/1:349:0,348,0:0:0:348,0:12447,0:-1119.69,-104.758,0,-1119.69,-104.758,-1119.69	1/1:19:0,19,0:0:0:19,0:684,0:-61.8765,-5.71957,0,-61.8765,-5.71957,-61.8765	1/1:425:0,424,0:0:0:424,0:15149,0:-1362.76,-127.637,0,-1362.76,-127.637,-1362.76	1/2:120:0,74,46:0:0:74,46:2648,1603:-314.219,-98.2557,-75.9795,-216.267,0,-202.42	1/1:127:1,125,1:1:32:125,1:4460,36:-398.296,-35.0356,0,-396.286,-35.3321,-398.563	1/1:7:0,7,0:0:0:7,0:252,0:-23.029,-2.10721,0,-23.029,-2.10721,-23.029	1/1:36:0,35,0:0:0:35,0:1260,0:-113.346,-10.5361,0,-113.346,-10.5361,-113.346	1/1:4:0,4,0:0:0:4,0:144,0:-13.3052,-1.20412,0,-13.3052,-1.20412,-13.3052	1/1:15:0,15,0:0:0:15,0:524,0:-47.489,-4.51545,0,-47.489,-4.51545,-47.489	1/1:43:0,43,0:0:0:43,0:1536,0:-138.513,-12.9443,0,-138.513,-12.9443,-138.513	1/2:176:0,89,86:0:0:89,86:3196,3034:-466.109,-205.371,-178.579,-260.708,0,-234.819	1/1:113:1,111,0:1:24:111,0:3984,0:-356.209,-31.6151,0,-356.51,-33.4143,-358.368	1/1:46:0,45,0:0:0:45,0:1599,0:-143.832,-13.5464,0,-143.832,-13.5464,-143.832	1/2:7:0,6,1:0:0:6,1:216,36:-19.9713,-2.25768,-0.451496,-17.9843,0,-17.6833	1/2:183:0,110,72:0:0:110,72:3925,2532:-473.537,-153.542,-120.429,-320.044,0,-298.369	1/1:54:0,54,0:0:0:54,0:1932,0:-174.152,-16.2556,0,-174.152,-16.2556,-174.152	1/1:292:3,287,0:3:90:287,0:10276,0:-916.281,-79.1824,0,-917.184,-86.3956,-924.379	1/1:62:0,60,0:0:0:60,0:2144,0:-192.865,-18.0618,0,-192.865,-18.0618,-192.865	1/2:43:1,18,24:1:30:18,24:644,848:-104.456,-52.2147,-49.1953,-50.1712,0,-45.342	1/2:92:0,51,41:0:0:51,41:1823,1450:-246.534,-97.8603,-82.5077,-148.998,0,-136.656	1/2:116:0,56,60:0:0:56,60:1992,2099:-280.959,-118.575,-101.717,-162.69,0,-144.628	1/1:252:1,247,1:1:24:247,1:8794,36:-788.974,-72.51,0,-786.964,-72.0449,-788.521	1/2:78:0,36,42:0:0:36,42:1292,1478:-200.919,-95.4967,-84.6597,-105.747,0,-93.1034	1/2:126:0,59,67:0:0:59,67:2124,2362:-325.878,-152.551,-134.79,-173.653,0,-153.484	1/2:81:0,51,30:0:0:51,30:1828,1063:-220.528,-71.3992,-56.0467,-149.448,0,-140.417	1/2:4:0,1,3:0:0:1,3:36,108:-10.1795,-7.22465,-6.92362,-3.29724,0,-2.39415	1/2:113:0,55,58:0:0:55,58:1968,2038:-274.589,-114.065,-97.5079,-160.83,0,-143.371	1/2:79:0,49,30:0:0:49,30:1756,1055:-213.55,-70.2972,-55.5467,-143.571,0,-134.54	1/1:6:0,6,0:0:0:6,0:212,0:-19.4248,-1.80618,0,-19.4248,-1.80618,-19.4248	1/2:141:0,53,87:0:0:53,87:1900,3024:-339.986,-185.002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chr11	354291	.	AT	AC,CC	404663	PASS	AB=0.617034,0.380964;ABP=1012.95,1047.8;AC=134,54;AF=0.712766,0.287234;AN=188;AO=12688,3241;CIGAR=1M1X,2X;DP=15960;DPB=16680.5;DPRA=0,1.24903;EPP=27519.9,7040.75;EPPR=16.0391;GTI=4;LEN=1,2;MEANALT=1.87234,2.28333;MQM=58.3147,33.3261;MQMR=60;NS=94;NUMALT=2;ODDS=4.64007;PAIRED=0,0;PAIREDR=0;PAO=720.5,720.5;PQA=25688,25688;PQR=0;PRO=0;QA=452545,113218;QR=197;RO=6;RPL=7595,2742;RPP=1074.37,3373.82;RPPR=16.0391;RPR=5093,499;RUN=1,1;SAF=7599,2742;SAP=1081.23,3373.82;SAR=5089,499;SRF=6;SRP=16.0391;SRR=0;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:78:0,53,25:0:0:53,25:1908,861:-203.655,-47.9672,-32.0126,-154.997,0,-147.471	1/2:77:0,50,27:0:0:50,27:1781,955:-193.692,-48.7014,-33.6499,-140.218,0,-132.09	1/2:243:0,114,129:0:0:114,129:4091,4509:-586.071,-252.586,-218.268,-332.367,0,-293.534	1/2:347:0,257,90:0:0:257,90:9191,3114:-962.288,-213.084,-135.719,-749.516,0,-722.423	1/1:218:0,218,0:0:0:218,0:7734,0:-694.896,-65.6245,0,-694.896,-65.6245,-694.896	1/1:77:0,77,0:0:0:77,0:2764,0:-242.657,-23.1793,0,-242.657,-23.1793,-242.657	1/2:209:0,143,66:0:0:143,66:5093,2280:-569.201,-154.207,-111.16,-415.306,0,-395.438	1/2:238:0,114,124:0:0:114,124:4070,4315:-573.713,-241.939,-207.621,-329.407,0,-292.079	1/2:128:0,73,55:0:0:73,55:2619,1955:-318.212,-104.647,-82.6719,-209.517,0,-192.961	1/2:171:0,99,72:0:0:99,72:3539,2536:-460.182,-171.978,-142.176,-288.527,0,-266.853	1/1:144:0,144,0:0:0:144,0:5105,0:-459.219,-43.3483,0,-459.219,-43.3483,-459.219	1/1:127:0,127,0:0:0:127,0:4551,0:-405.841,-38.2308,0,-405.841,-38.2308,-405.841	1/1:97:0,97,0:0:0:97,0:3441,0:-306.391,-29.1999,0,-306.391,-29.1999,-306.391	1/2:134:0,98,36:0:0:98,36:3488,1252:-367.497,-83.2465,-53.7456,-284.383,0,-273.546	1/1:140:0,138,0:0:0:138,0:4936,0:-443.349,-41.5421,0,-443.349,-41.5421,-443.349	1/1:129:0,129,0:0:0:129,0:4611,0:-414.09,-38.8329,0,-414.09,-38.8329,-414.09	1/2:53:0,29,24:0:0:29,24:1021,845:-130.658,-47.5572,-38.8273,-81.3042,0,-74.0795	1/1:53:0,53,0:0:0:53,0:1904,0:-167.916,-15.9546,0,-167.916,-15.9546,-167.916	1/2:41:0,20,21:0:0:20,21:696,754:-97.9616,-41.3608,-35.3402,-56.1781,0,-49.8565	1/2:301:0,223,78:0:0:223,78:7949,2732:-831.937,-184.684,-117.554,-647.565,0,-624.085	1/2:318:0,201,117:0:0:201,117:7168,4110:-844.008,-260.13,-199.623,-583.591,0,-548.37	1/2:116:0,65,51:0:0:65,51:2325,1782:-308.205,-118.658,-99.0913,-189.867,0,-174.515	1/2:223:0,158,65:0:0:158,65:5634,2250:-611.818,-152.931,-105.368,-459.2,0,-439.633	1/2:164:0,116,47:0:0:116,47:4133,1677:-447.762,-110.977,-76.0575,-336.661,0,-322.513	1/1:147:0,147,0:0:0:147,0:5280,0:-474.916,-44.2514,0,-474.916,-44.2514,-474.916	1/2:437:0,293,143:0:0:293,143:10440,5017:-1202.2,-352.026,-263.825,-850.135,0,-807.087	1/1:571:0,570,1:0:0:570,1:20323,25:-1826.36,-171.587,0,-1824.41,-169.389,-1824.11	1/1:56:0,56,0:0:0:56,0:1971,0:-177.504,-16.8577,0,-177.504,-16.8577,-177.504	1/1:644:0,643,1:0:0:643,1:22947,25:-2063.38,-193.562,0,-2061.43,-191.364,-2061.13	1/2:294:0,233,60:0:0:233,60:8297,2103:-814.52,-138.702,-68.5622,-675.339,0,-657.277	1/1:448:0,446,1:0:0:446,1:15940,34:-1431.98,-134.259,0,-1429.71,-132.023,-1429.41	1/1:13:0,13,0:0:0:13,0:468,0:-42.4514,-3.91339,0,-42.4514,-3.91339,-42.4514	1/1:41:0,41,0:0:0:41,0:1472,0:-132.709,-12.3422,0,-132.709,-12.3422,-132.709	1/1:4:0,4,0:0:0:4,0:144,0:-13.3052,-1.20412,0,-13.3052,-1.20412,-13.3052	1/1:14:0,14,0:0:0:14,0:500,0:-45.1127,-4.21442,0,-45.1127,-4.21442,-45.1127	1/1:45:0,45,0:0:0:45,0:1599,0:-144.122,-13.5464,0,-144.122,-13.5464,-144.122	1/2:327:0,198,129:0:0:198,129:7046,4487:-897.771,-324.978,-265.374,-573.062,0,-534.229	1/1:193:0,193,0:0:0:193,0:6927,0:-622.657,-58.0988,0,-622.657,-58.0988,-622.657	1/1:55:0,55,0:0:0:55,0:1953,0:-173.107,-16.5567,0,-173.107,-16.5567,-173.107	1/2:8:0,7,1:0:0:7,1:248,36:-22.5461,-2.25768,-0.150466,-20.5566,0,-20.2556	1/2:270:0,191,79:0:0:191,79:6796,2758:-726.232,-172.533,-115.037,-553.761,0,-529.979	1/1:71:0,71,0:0:0:71,0:2527,0:-227.539,-21.3731,0,-227.539,-21.3731,-227.539	1/1:478:1,477,0:1:25:477,0:17039,0:-1529.62,-141.392,0,-1529.92,-143.591,-1531.87	1/1:188:0,188,0:0:0:188,0:6690,0:-601.568,-56.5936,0,-601.568,-56.5936,-601.568	1/2:80:0,54,25:0:0:54,25:1900,877:-211.71,-57.1173,-40.8617,-154.544,0,-147.018	1/2:149:0,99,49:0:0:99,49:3544,1703:-408.786,-120.068,-90.2657,-288.692,0,-273.941	1/2:118:0,58,60:0:0:58,60:2051,2082:-281.373,-114.32,-96.8601,-163.955,0,-145.893	1/1:393:0,391,1:0:0:391,1:13919,36:-1250.93,-117.703,0,-1248.62,-115.395,-1248.31	1/2:142:0,86,53:0:0:86,53:3071,1858:-376.518,-126.479,-100.591,-250.033,0,-234.079	1/2:206:0,125,81:0:0:125,81:4433,2825:-550.407,-190.244,-152.616,-360.48,0,-336.097	1/2:198:0,149,49:0:0:149,49:5241,1713:-550.98,-124.695,-79.8416,-426.609,0,-411.859	1/2:13:0,6,7:0:0:6,7:216,250:-36.5798,-18.97,-17.1638,-17.9553,0,-15.8481	1/2:115:0,56,59:0:0:56,59:2016,2009:-278.401,-113.9,-97.0419,-162.406,0,-144.645	1/2:111:0,77,34:0:0:77,34:2748,1222:-306.673,-82.8328,-59.6535,-224.16,0,-213.925	1/1:7:0,7,0:0:0:7,0:252,0:-22.5469,-2.10721,0,-22.5469,-2.10721,-2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chr11	587660	.	G	A	127468	PASS	AB=0.409217;ABP=1035.99;AC=90;AF=0.478723;AN=188;AO=5908;CIGAR=1X;DP=14543;DPB=14543;DPRA=13.0206;EPP=240.599;EPPR=632.166;GTI=4;LEN=1;MEANALT=1.07527;MQM=59.8724;MQMR=50.0366;NS=94;NUMALT=1;ODDS=5.89714;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=210605;QR=306757;RO=8627;RPL=56;RPP=12350.3;RPPR=17860.8;RPR=5852;RUN=1;SAF=3412;SAP=311.403;SAR=2496;SRF=5206;SRP=805.004;SRR=3421;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:45,23:45:1593:23:819:-53.5615,0,-122.053	0/1:234:171,63:171:6095:63:2260:-133.222,0,-467.96	0/1:222:168,54:168:6004:54:1914:-105.699,0,-461.015	0/1:224:145,79:145:5118:79:2800:-184.809,0,-387.312	0/1:91:45,46:45:1601:46:1648:-121.215,0,-114.656	0/1:66:20,46:20:688:46:1639:-127.929,0,-41.13	0/1:195:136,57:136:4839:57:2029:-123.085,0,-371.435	0/1:215:157,58:157:5584:58:2056:-120.588,0,-425.068	0/1:123:76,47:76:2718:47:1688:-115.18,0,-204.625	0/1:120:74,46:74:2664:46:1632:-111.043,0,-201.05	0/1:204:102,102:102:3589:102:3592:-262.074,0,-256.697	0/1:191:61,130:61:2188:130:4665:-362.512,0,-132.395	0/1:259:188,71:188:6714:71:2548:-151.604,0,-517.319	0/1:231:164,67:164:5853:67:2379:-144.83,0,-447.579	0/1:204:83,121:83:2975:121:4298:-325.536,0,-197.82	0/1:181:45,136:45:1608:136:4856:-382.707,0,-87.5379	0/1:193:136,57:136:4829:57:2009:-121.705,0,-370.33	0/1:181:71,110:71:2530:110:3913:-297.877,0,-167.859	0/1:145:87,58:87:3107:58:2056:-140.384,0,-231.338	0/1:283:184,99:184:6532:99:3529:-232.614,0,-498.793	0/1:183:117,66:117:4135:66:2351:-155.891,0,-311.199	0/1:89:76,13:76:2663:13:468:-15.668,0,-210.735	0/1:83:57,26:57:2016:26:921:-58.2197,0,-155.776	0/1:203:158,45:158:5636:45:1616:-84.6209,0,-439.208	0/1:102:25,77:25:859:77:2755:-217.486,0,-45.8586	0/1:375:274,101:274:9719:101:3628:-213.838,0,-749.801	0/1:156:52,103:52:1840:103:3671:-283.622,0,-116.048	0/1:98:28,70:28:991:70:2491:-194.939,0,-57.7747	0/1:351:208,143:208:7368:143:5100:-353.436,0,-544.968	0/1:87:57,30:57:2020:30:1071:-70.512,0,-153.808	0/1:177:76,101:76:2728:101:3624:-273.082,0,-187.22	0/0:12:12,0:12:428:0:0:0,-3.61236,-37.9854	0/1:24:17,7:17:608:7:252:-15.8042,0,-46.7373	0/1:13:8,5:8:284:5:180:-12.6387,0,-21.0816	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.5046	0/0:22:21,1:21:748:1:36:0,-3.02438,-58.6183	0/1:593:454,139:454:16174:139:4899:-262.552,0,-1265.38	0/1:95:33,62:33:1158:62:2217:-171.195,0,-73.4029	0/1:168:58,110:58:2048:110:3934:-303.679,0,-129.071	0/0:20:19,1:19:680:1:36:0,-2.42232,-56.984	0/1:254:201,53:201:7173:53:1895:-94.3658,0,-560.097	0/1:153:82,71:82:2927:71:2539:-182.703,0,-211.514	0/1:196:67,129:67:2376:129:4597:-353.891,0,-150.664	0/1:200:70,130:70:2507:130:4667:-359.983,0,-160.74	0/1:200:144,56:144:5118:56:2012:-121.147,0,-393.013	0/1:90:43,47:43:1518:47:1654:-122.053,0,-109.57	0/1:154:114,40:114:4065:40:1431:-82.7282,0,-312.913	0/1:190:101,89:101:3571:89:3192:-229.452,0,-257.243	0/1:82:52,30:52:1835:30:1076:-72.4684,0,-139.644	0/1:101:67,34:67:2374:34:1216:-79.3425,0,-181.015	0/1:195:127,68:127:4507:68:2444:-160.238,0,-343.998	0/1:15:6,9:6:212:9:320:-24.6269,0,-14.4526	0/1:160:111,49:111:3958:49:1748:-109.439,0,-301.408	0/1:42:26,15:26:928:15:540:-36.2345,0,-70.8822	0/1:15:9,6:9:324:6:216:-15.2751,0,-22.6005	0/1:206:152,54:152:5358:54:1907:-109.895,0,-414.126	0/1:83:24,59:24:860:59:2104:-164.644,0,-49.5964	0/1:15:12,2:12:428:2:72:-2.26579,0,-33.5567	0/1:18:10,8:10:352:8:284:-20.4848,0,-26.4602	0/1:99:31,67:31:1108:67:2384:-184.166,0,-68.5091	0/1:307:212,95:212:7555:95:3384:-212.358,0,-579.748	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.6704	0/1:106:33,73:33:1180:73:2599:-201.347,0,-73.4512	0/1:267:197,70:197:7010:70:2501:-144.966,0,-542.168	0/1:89:60,29:60:2137:29:1031:-66.311,0,-163.847	0/1:100:36,64:36:1283:64:2272:-174.634,0,-84.2376	0/1:172:102,70:102:3618:70:2487:-172.305,0,-270.228	0/1:153:126,27:126:4490:27:972:-41.7403,0,-354.451	0/1:63:47,16:47:1683:16:572:-32.8485,0,-131.428	0/1:101:27,73:27:943:73:2600:-203.786,0,-52.7901	0/1:261:195,66:195:6911:66:2324:-130.832,0,-536.64	0/1:27:23,4:23:824:4:144:-5.18581,0,-65.4671	0/1:88:67,21:67:2396:21:752:-41.5156,0,-186.526	0/1:106:81,25:81:2908:25:896:-49.0512,0,-225.34	0/1:324:229,95:229:8115:95:3381:-206.967,0,-624.419	0/1:210:90,120:90:3193:120:4284:-322.475,0,-220.406	0/1:95:36,59:36:1284:59:2068:-157.79,0,-80.4183	0/1:139:54,85:54:1916:85:3033:-231.356,0,-126.505	0/0:59:58,1:58:2061:1:36:0,-14.1625,-174.193	0/1:113:73,40:73:2589:40:1440:-95.8813,0,-196.49	0/1:161:44,117:44:1580:117:4146:-324.859,0,-91.6292	0/1:391:219,172:219:7775:172:6150:-435.897,0,-570.713	0/1:282:205,76:205:7319:76:2710:-159.194,0,-566.051	0/1:214:149,65:149:5331:65:2323:-144.909,0,-411.775	0/1:278:191,87:191:6805:87:3054:-190.713,0,-521.386	0/1:269:31,238:31:1108:238:8527:-685.51,0,-17.3844	0/1:93:28,65:28:990:65:2317:-180.793,0,-59.5963	0/1:135:93,42:93:3293:42:1504:-94.9871,0,-253.778	0/1:164:109,55:109:3880:55:1928:-124.425,0,-297.179	0/1:108:31,77:31:1103:77:2760:-216.129,0,-65.0481	0/1:116:79,37:79:2811:37:1331:-83.4546,0,-215.852	0/1:155:121,34:121:4322:34:1208:-62.3664,0,-341.365	0/1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chr11	587672	.	CGTA	AGTC	122793	PASS	AB=0.412933;ABP=971.398;AC=96;AF=0.510638;AN=188;AO=6137;CIGAR=1X2M1X;DP=14777;DPB=14780.5;DPRA=0;EPP=13320.7;EPPR=18608.2;GTI=2;LEN=4;MEANALT=1.69149;MQM=46.0161;MQMR=59.969;NS=94;NUMALT=1;ODDS=109.993;PAIRED=0;PAIREDR=0;PAO=14;PQA=496;PQR=0;PRO=0;QA=213080;QR=298265;RO=8572;RPL=3703;RPP=572.809;RPPR=425.871;RPR=2434;RUN=1;SAF=3702;SAP=571.014;SAR=2435;SRF=4931;SRP=424.563;SRR=3641;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:67:45,22:45:1544:22:762:-47.622,0,-119.077	0/1:239:130,108:130:4579:108:3731:-255.127,0,-340.276	0/1:228:108,119:108:3692:119:4126:-293.18,0,-263.79	0/1:228:139,89:139:4834:89:3098:-205.38,0,-366.59	0/1:93:46,47:46:1592:47:1649:-118.631,0,-115.571	0/1:68:47,20:47:1656:20:682:-40.1397,0,-128.907	0/1:197:129,66:129:4479:66:2307:-145.48,0,-344.351	0/1:223:108,113:108:3729:113:3924:-274.577,0,-268.945	0/1:126:95,31:95:3296:31:1058:-54.6036,0,-258.925	0/1:124:84,40:84:2897:40:1389:-85.8277,0,-223.642	0/1:204:101,101:101:3525:101:3514:-251.112,0,-256.297	0/1:194:130,62:130:4556:62:2156:-129.283,0,-352.056	0/1:262:156,103:156:5405:103:3630:-241.181,0,-408.312	0/1:234:136,98:136:4764:98:3423:-230.417,0,-358.366	0/1:207:124,81:124:4290:81:2831:-187.792,0,-324.294	0/1:184:137,46:137:4767:46:1568:-83.9477,0,-373.747	0/1:195:115,80:115:3993:80:2782:-187.107,0,-300.867	0/1:183:110,70:110:3849:70:2426:-159.205,0,-292.11	0/1:145:104,41:104:3589:41:1426:-80.2914,0,-279.574	0/1:288:188,100:188:6524:100:3434:-219.202,0,-500.568	0/1:188:132,55:132:4456:55:1876:-108.547,0,-344.569	0/1:91:45,44:45:1541:44:1525:-109.171,0,-111.908	0/1:87:60,27:60:2054:27:915:-55.6398,0,-158.937	0/1:207:104,102:104:3650:102:3542:-251.197,0,-266.335	0/1:102:75,25:75:2628:25:826:-43.3195,0,-206.306	0/1:380:179,200:179:6232:200:6907:-497.581,0,-446.539	0/1:158:105,52:105:3666:52:1790:-110.991,0,-282.626	0/1:104:73,31:73:2541:31:1055:-61.8398,0,-197.633	0/1:358:148,207:148:5173:207:7198:-532.784,0,-358.496	0/1:87:55,32:55:1924:32:1101:-71.4631,0,-147.245	0/1:179:104,75:104:3635:75:2575:-174.213,0,-273.193	1/1:12:0,12:0:0:12:424:-37.6976,-3.61236,0	0/1:26:8,18:8:285:18:622:-47.4893,0,-18.1678	0/1:13:5,8:5:180:8:278:-20.6415,0,-12.6387	0/1:6:1,5:1:36:5:163:-12.9571,0,-1.79209	0/1:22:2,19:2:72:19:661:-48.9613,0,-0.181425	0/1:601:302,296:302:10554:296:10327:-738.563,0,-769.448	0/1:97:63,34:63:2194:34:1199:-76.8487,0,-168.232	0/1:168:108,60:108:3755:60:2028:-128.198,0,-287.581	0/1:21:4,17:4:129:17:587:-45.8922,0,-5.60708	0/1:257:114,143:114:3948:143:4961:-361.876,0,-278.153	0/1:155:73,80:73:2551:80:2809:-202.2,0,-183.473	0/1:194:126,68:126:4372:68:2336:-148.465,0,-335.223	0/1:207:135,71:135:4753:71:2486:-156.912,0,-365.563	0/1:198:115,83:115:3983:83:2893:-195.876,0,-298.784	0/1:92:79,13:79:2718:13:433:-11.3844,0,-217.167	0/1:162:85,77:85:2941:77:2652:-183.879,0,-216.159	0/1:196:90,106:90:3075:106:3643:-262.331,0,-217.979	0/1:84:54,29:54:1905:29:1017:-65.6126,0,-146.489	0/1:103:67,35:67:2352:35:1220:-76.7159,0,-180.875	0/1:200:123,77:123:4249:77:2686:-178.754,0,-322.389	0/1:15:9,6:9:320:6:198:-13.3611,0,-24.6273	0/1:164:104,60:104:3611:60:2087:-132.805,0,-275.831	0/1:42:33,9:33:1148:9:316:-15.9372,0,-90.9821	0/1:15:6,9:6:209:9:316:-22.3791,0,-14.6351	0/1:217:99,116:99:3373:116:4047:-292.415,0,-238.742	0/1:85:60,25:60:2062:25:884:-51.6585,0,-160.261	0/1:15:3,12:3:108:12:418:-32.7232,0,-5.55972	0/1:18:12,6:12:419:6:211:-13.7802,0,-32.6245	0/1:99:69,30:69:2403:30:1045:-63.2078,0,-186.434	0/1:306:157,147:157:5532:147:5185:-368.038,0,-406.192	0/1:5:2,3:2:72:3:108:-8.43069,0,-5.33157	0/1:110:73,37:73:2537:37:1294:-82.5068,0,-195.47	0/1:272:122,148:122:4275:148:5099:-371.455,0,-303.297	0/1:94:60,34:60:2090:34:1151:-74.1347,0,-160.072	0/1:107:66,39:66:2283:39:1334:-86.9731,0,-173.864	0/1:174:121,50:121:4190:50:1716:-101.239,0,-325.549	0/1:157:72,85:72:2521:85:2915:-211.28,0,-179.881	0/1:62:37,25:37:1270:25:890:-60.4269,0,-95.9335	0/1:100:74,26:74:2590:26:914:-50.6424,0,-203.247	0/1:263:138,124:138:4774:124:4275:-301.428,0,-350.749	0/1:25:12,13:12:432:13:465:-34.1589,0,-31.6954	0/1:90:45,45:45:1519:45:1581:-113.082,0,-109.902	0/1:108:58,49:58:2024:49:1687:-115.758,0,-149.954	0/1:334:178,155:178:6200:155:5373:-375.713,0,-457.531	0/1:215:126,89:126:4402:89:3108:-211.782,0,-331.63	0/1:99:61,37:61:2097:37:1263:-79.3126,0,-159.265	0/1:149:90,58:90:3154:58:1969:-129.52,0,-239.275	1/1:58:5,52:5:174:52:1823:-142.393,-1.43615,0	0/1:115:86,28:86:2981:28:994:-52.4605,0,-233.848	0/1:164:117,46:117:4050:46:1589:-91.6995,0,-315.267	0/1:395:174,218:174:6055:218:7590:-555.889,0,-426.726	0/1:279:152,125:152:5372:125:4396:-305.479,0,-399.893	0/1:218:125,93:125:4384:93:3263:-224.954,0,-329.115	0/1:279:150,129:150:5214:129:4516:-316.422,0,-384.287	0/1:268:237,31:237:8272:31:1096:-16.7796,0,-663.828	0/1:93:65,28:65:2268:28:968:-57.7508,0,-176.383	0/1:135:97,38:97:3364:38:1320:-76.4324,0,-262.328	0/1:166:117,48:117:4068:48:1681:-98.8594,0,-316.285	0/1:111:78,33:78:2727:33:1157:-69.6028,0,-212.258	0/1:115:76,37:76:2628:37:1283:-79.1585,0,-202.392	0/1:158:117,41:117:4113:41:1422:-79.6445,0,-322.8	0/1:146:70,75:70:2496:75:2577:-185.878,0,-180.924	0/1:293:153,140:153:5372:140:4905:-346.387,0,-395.135
chr11	587688	.	C	G	124058	PASS	AB=0.412751;ABP=952.952;AC=96;AF=0.510638;AN=188;AO=5994;CIGAR=1X;DP=14436;DPB=14436;DPRA=0;EPP=477.132;EPPR=433.813;GTI=2;LEN=1;MEANALT=1.15957;MQM=46.0747;MQMR=59.9759;NS=94;NUMALT=1;ODDS=109.294;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=212846;QR=298787;RO=8427;RPL=5994;RPP=13018.8;RPPR=18102.8;RPR=0;RUN=1;SAF=3569;SAP=477.132;SAR=2425;SRF=4837;SRP=403.706;SRR=3590;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:67:45,22:45:1560:22:779:-49.2639,0,-120.516	0/1:235:129,106:129:4601:106:3775:-260.474,0,-343.512	0/1:220:103,116:103:3657:116:4113:-293.633,0,-263.047	0/1:224:136,88:136:4799:88:3125:-208.384,0,-364.637	0/1:90:45,45:45:1607:45:1601:-114.903,0,-117.827	0/1:65:46,19:46:1652:19:680:-40.5195,0,-129.402	0/1:192:128,64:128:4498:64:2257:-142.003,0,-347.191	0/1:216:107,109:107:3775:109:3866:-271.796,0,-274.928	0/1:122:89,32:89:3150:32:1129:-62.4983,0,-246.94	0/1:121:82,39:82:2928:39:1392:-86.4432,0,-227.331	0/1:195:100,95:100:3575:95:3379:-241.534,0,-263.256	0/1:191:130,61:130:4573:61:2171:-131.132,0,-354.243	0/1:254:152,102:152:5376:102:3590:-239.744,0,-407.515	0/1:228:133,94:133:4710:94:3326:-225.654,0,-355.37	0/1:200:122,77:122:4338:77:2740:-180.743,0,-330.334	0/1:180:136,44:136:4816:44:1568:-85.4626,0,-379.413	0/1:192:112,80:112:3984:80:2854:-194.632,0,-300.948	0/1:183:112,71:112:3977:71:2518:-166.612,0,-303.033	0/1:140:99,40:99:3517:40:1410:-80.8174,0,-274.537	0/1:286:185,101:185:6589:101:3578:-232.533,0,-506.982	0/1:180:130,50:130:4536:50:1759:-101.687,0,-354.215	0/1:88:44,44:44:1543:44:1559:-112.497,0,-112.668	0/1:86:59,27:59:2075:27:955:-59.4637,0,-161.129	0/1:203:104,99:104:3683:99:3520:-250.364,0,-270.563	0/1:101:76,25:76:2711:25:890:-49.0797,0,-213.83	0/1:367:175,192:175:6175:192:6846:-496.951,0,-445.343	0/1:155:102,53:102:3627:53:1884:-119.109,0,-279.97	0/1:102:71,31:71:2539:31:1085:-65.6868,0,-198.055	0/1:348:143,205:143:5094:205:7289:-539.18,0,-353.801	0/1:85:54,31:54:1936:31:1092:-71.2395,0,-148.929	0/1:178:104,74:104:3719:74:2635:-180.041,0,-281.328	1/1:12:0,12:0:0:12:432:-38.3414,-3.61236,0	0/1:27:9,18:9:324:18:635:-48.25,0,-21.378	0/1:13:5,8:5:180:8:288:-21.4374,0,-12.6387	0/1:6:1,5:1:36:5:171:-13.6852,0,-1.79209	0/1:20:2,18:2:72:18:635:-48.8698,0,-0.816122	0/1:584:293,289:293:10441:289:10264:-738.449,0,-764.056	0/1:92:58,33:58:2080:33:1188:-77.705,0,-159.805	0/1:169:110,59:110:3884:59:2082:-132.159,0,-298.883	0/1:19:3,16:3:108:16:568:-44.7631,0,-4.3556	0/1:255:112,142:112:3955:142:5039:-368.245,0,-279.319	0/1:150:71,79:71:2513:79:2788:-201.025,0,-181.267	0/1:189:125,64:125:4446:64:2296:-146.234,0,-343.415	0/1:206:135,71:135:4766:71:2501:-159.398,0,-367.089	0/1:196:114,82:114:4008:82:2869:-196.034,0,-301.908	0/1:89:76,13:76:2724:13:456:-14.3396,0,-218.611	0/1:159:85,74:85:2951:74:2617:-181.526,0,-217.958	0/1:194:89,105:89:3176:105:3727:-270.014,0,-227.665	0/1:79:52,27:52:1806:27:960:-61.9267,0,-139.033	0/1:100:65,35:65:2323:35:1243:-79.3165,0,-179.227	0/1:195:123,72:123:4339:72:2574:-170.357,0,-331.988	0/1:14:9,5:9:320:5:172:-11.5237,0,-24.9279	0/1:159:103,56:103:3691:56:1991:-125.824,0,-284.528	0/1:41:32,9:32:1140:9:316:-16.208,0,-90.567	0/1:13:6,7:6:216:7:248:-17.2127,0,-15.8771	0/1:213:97,115:97:3415:115:4093:-297.182,0,-243.388	0/1:80:58,22:58:2033:22:792:-45.2466,0,-159.156	0/1:15:3,12:3:108:12:420:-32.8836,0,-5.55972	0/1:18:12,6:12:423:6:216:-14.2208,0,-32.9865	0/1:93:67,26:67:2408:26:928:-54.9953,0,-188.98	0/1:306:156,150:156:5519:150:5385:-385.322,0,-404.722	0/1:5:2,3:2:72:3:104:-8.0856,0,-5.33157	0/1:109:73,36:73:2616:36:1271:-80.7851,0,-202.875	0/1:268:123,145:123:4383:145:5127:-374.543,0,-313.969	0/1:91:59,32:59:2084:32:1148:-74.3234,0,-160.434	0/1:103:65,38:65:2300:38:1338:-87.7885,0,-176.252	0/1:170:119,50:119:4222:50:1783:-107.012,0,-328.926	0/1:154:72,82:72:2529:82:2905:-211.702,0,-181.5	0/1:60:36,24:36:1250:24:860:-58.4043,0,-94.7361	0/1:101:74,27:74:2636:27:948:-53.8116,0,-207.083	0/1:256:134,122:134:4775:122:4326:-307.448,0,-352.845	0/1:26:13,13:13:468:13:464:-33.7792,0,-34.6329	0/1:86:41,44:41:1468:44:1567:-113.214,0,-106.513	0/1:106:59,47:59:2073:47:1684:-115.585,0,-154.93	0/1:322:171,149:171:6060:149:5265:-369.547,0,-448.809	0/1:212:123,89:123:4382:89:3168:-217.659,0,-330.736	0/1:95:60,35:60:2098:35:1244:-78.7253,0,-160.489	0/1:140:85,55:85:3039:55:1932:-128.105,0,-231.595	1/1:57:5,52:5:180:52:1842:-142.252,-0.606645,0	0/1:112:84,28:84:2964:28:1008:-55.6535,0,-233.275	0/1:165:118,47:118:4178:47:1669:-98.3337,0,-326.536	0/1:382:171,210:171:6003:210:7454:-545.811,0,-425.33	0/1:273:150,123:150:5359:123:4369:-305.017,0,-400.262	0/1:214:125,89:125:4433:89:3192:-219.924,0,-334.721	0/1:269:146,123:146:5118:123:4392:-310.224,0,-378.77	0/1:264:233,31:233:8323:31:1099:-18.1746,0,-669.522	0/1:90:62,28:62:2195:28:1000:-61.4245,0,-170.72	0/1:131:93,38:93:3295:38:1360:-81.0091,0,-257.334	0/1:163:115,48:115:4104:48:1709:-102.067,0,-320.479	0/1:107:74,33:74:2623:33:1166:-71.1823,0,-204.108	0/1:115:79,36:79:2782:36:1280:-78.5037,0,-216.001	0/1:158:117,41:117:4156:41:1447:-81.8833,0,-326.661	0/1:142:69,73:69:2459:73:2599:-188.756,0,-178.818	0/1:290:153,137:153:5435:137:4867:-343.344,0,-401.982
chr11	771923	.	C	T	124644	PASS	AB=0.487693;ABP=17.9754;AC=56;AF=0.297872;AN=188;AO=5562;CIGAR=1X;DP=18840;DPB=18840;DPRA=1.03683;EPP=12072.1;EPPR=28807.6;GTI=0;LEN=1;MEANALT=1.09231;MQM=59.9894;MQMR=59.9964;NS=94;NUMALT=1;ODDS=5.99997;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=196844;QR=468915;RO=13269;RPL=3149;RPP=214.495;RPPR=1044.73;RPR=2413;RUN=1;SAF=3150;SAP=215.646;SAR=2412;SRF=7897;SRP=1046.38;SRR=5372;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:63:24,39:24:838:39:1346:-102.469,0,-56.7714	0/1:291:152,139:152:5395:139:4878:-351.576,0,-398.081	0/1:267:136,131:136:4815:131:4669:-339.997,0,-353.133	0/1:495:235,260:235:8292:260:9191:-678.161,0,-597.286	0/0:150:149,1:149:5277:1:36:0,-41.5562,-471.47	0/0:123:120,3:120:4204:3:108:0,-26.9515,-368.468	0/1:291:168,123:168:5941:123:4370:-305.876,0,-447.2	0/1:327:164,163:164:5742:163:5774:-421.342,0,-418.464	0/1:177:102,75:102:3638:75:2649:-185.373,0,-274.342	0/1:167:85,82:85:3043:82:2932:-213.843,0,-223.827	0/0:148:148,0:148:5240:0:0:0,-44.5524,-471.739	0/1:144:73,70:73:2574:70:2480:-180.082,0,-188.538	0/1:144:79,65:79:2810:65:2280:-162.113,0,-209.791	0/1:145:61,84:61:2137:84:2993:-225.952,0,-148.945	0/0:141:141,0:141:5026:0:0:0,-42.4452,-452.488	0/0:125:125,0:125:4410:0:0:0,-37.6287,-397.075	0/1:119:71,48:71:2535:48:1668:-114.577,0,-192.578	0/0:131:131,0:131:4642:0:0:0,-39.4349,-417.944	0/1:94:46,48:46:1630:48:1685:-123.635,0,-118.691	0/1:468:254,214:254:8915:214:7542:-537.949,0,-661.461	0/1:243:129,114:129:4553:114:4007:-287.669,0,-336.786	0/1:157:52,105:52:1832:105:3669:-283.152,0,-117.896	0/1:188:86,102:86:3047:102:3597:-267.342,0,-217.865	0/1:222:116,106:116:4113:106:3747:-270.603,0,-303.528	0/0:132:132,0:132:4647:0:0:0,-39.736,-418.395	0/1:594:298,296:298:10569:296:10480:-764.313,0,-772.32	0/0:410:410,0:410:14490:0:0:0,-123.422,-1303.86	0/0:78:78,0:78:2787:0:0:0,-23.4803,-251.07	0/0:548:548,0:548:19395:0:0:0,-164.964,-1745.12	0/1:275:142,133:142:4976:133:4722:-342.358,0,-365.207	0/0:305:304,0:304:10723:0:0:0,-91.5131,-964.631	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/0:43:43,0:43:1506:0:0:0,-12.9443,-135.832	0/0:10:10,0:10:352:0:0:0,-3.0103,-32.0182	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:32:30,2:30:1058:2:72:0,-2.79624,-88.6929	0/1:384:208,176:208:7400:176:6220:-444.306,0,-550.455	0/0:332:332,0:332:11766:0:0:0,-99.942,-1058.81	0/0:164:164,0:164:5798:0:0:0,-49.3689,-521.937	0/1:6:4,2:4:144:2:68:-4.65153,0,-11.5074	0/1:305:159,146:159:5622:146:5187:-375.157,0,-414.289	0/0:110:110,0:110:3911:0:0:0,-33.1133,-352.185	0/0:304:303,0:303:10706:0:0:0,-91.2121,-963.097	0/0:168:168,0:168:5969:0:0:0,-50.573,-537.318	0/1:154:70,84:70:2421:84:2996:-223.514,0,-171.784	0/1:215:118,96:118:4177:96:3417:-243.113,0,-311.481	0/1:287:157,129:157:5552:129:4551:-323.463,0,-413.512	0/0:287:286,1:286:10082:1:36:0,-82.7973,-903.727	0/1:233:122,111:122:4318:111:3945:-285.103,0,-318.657	0/1:338:162,176:162:5714:176:6203:-456.625,0,-412.633	0/1:348:164,184:164:5739:184:6508:-481.051,0,-411.874	0/1:16:8,8:8:284:8:271:-19.9029,0,-21.0869	0/1:317:196,121:196:6966:121:4288:-290.672,0,-531.579	0/1:102:41,59:41:1441:59:2120:-160.664,0,-99.5783	0/0:36:36,0:36:1277:0:0:0,-10.8371,-115.231	0/1:310:175,135:175:6142:135:4774:-336.5,0,-459.567	0/0:103:103,0:103:3665:0:0:0,-31.0061,-330.054	0/1:42:30,12:30:1063:12:424:-25.8532,0,-83.3376	0/1:16:9,7:9:324:7:248:-17.8477,0,-24.6894	0/0:200:200,0:200:7016:0:0:0,-60.206,-631.509	0/1:245:122,123:122:4282:123:4370:-319.724,0,-311.808	0/1:10:6,4:6:212:4:144:-10.3033,0,-16.4145	0/0:380:377,2:377:13309:2:72:0,-107.613,-1190.78	0/1:390:196,194:196:6940:194:6906:-504.21,0,-507.267	0/1:85:35,50:35:1238:50:1760:-133.093,0,-86.1353	0/0:147:146,1:146:5176:1:36:0,-40.6531,-462.383	0/1:317:174,143:174:6126:143:5015:-356.077,0,-456.018	0/1:219:94,125:94:3337:125:4447:-334.475,0,-234.622	0/1:70:41,29:41:1476:29:1040:-72.8423,0,-112.064	0/0:178:177,1:177:6305:1:36:0,-49.9851,-563.946	0/1:158:74,84:74:2615:84:3005:-223.119,0,-188.034	0/1:44:26,18:26:904:18:648:-45.4066,0,-68.4266	0/1:177:87,90:87:3065:90:3198:-234.76,0,-222.796	0/1:165:86,79:86:3065:79:2791:-201.761,0,-226.408	0/1:247:142,105:142:4946:105:3728:-261.367,0,-370.937	0/0:338:338,0:338:11956:0:0:0,-101.748,-1075.91	0/0:274:274,0:274:9677:0:0:0,-82.4822,-870.89	0/0:291:289,2:289:10231:2:72:0,-80.763,-913.89	0/1:15:9,6:9:320:6:212:-14.9093,0,-24.6269	0/1:248:128,120:128:4503:120:4262:-309.102,0,-330.783	0/0:280:280,0:280:9814:0:0:0,-84.2884,-883.142	0/0:539:538,0:538:19059:0:0:0,-161.954,-1714.62	0/1:187:89,98:89:3144:98:3489:-257.928,0,-226.894	0/1:118:65,53:65:2311:53:1874:-133.417,0,-172.729	0/1:156:84,72:84:2961:72:2555:-183.24,0,-219.764	0/0:262:262,0:262:9254:0:0:0,-78.8699,-832.841	0/0:88:88,0:88:3112:0:0:0,-26.4906,-280.307	0/1:134:66,68:66:2347:68:2397:-175.647,0,-171.151	0/1:141:67,74:67:2403:74:2625:-194.051,0,-174.081	0/0:112:112,0:112:3986:0:0:0,-33.7154,-358.931	0/1:173:102,71:102:3578:71:2509:-173.984,0,-270.152	0/1:133:34,99:34:1207:99:3466:-272.115,0,-68.8983	0/0:244:244,0:244:8558:0:0:0,-73.4513,-770.227	0/0:208:207,1:207:7317:1:36:0,-59.016,-654.987
chr11	1711009	.	C	T	66398.7	PASS	AB=0.512604;ABP=13.6295;AC=48;AF=0.255319;AN=188;AO=3960;CIGAR=1X;DP=14863;DPB=14863;DPRA=1.53778;EPP=8593.36;EPPR=23676.4;GTI=0;LEN=1;MEANALT=1;MQM=59.9942;MQMR=59.9982;NS=94;NUMALT=1;ODDS=8.41483;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=140317;QR=388954;RO=10902;RPL=1;RPP=8593.36;RPPR=23676.4;RPR=3959;RUN=1;SAF=0;SAP=8602.04;SAR=3960;SRF=0;SRP=23676.4;SRR=10902;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:131:131,0:131:4636:0:0:0,-39.4349,-417.404	0/1:83:38,45:38:1368:45:1572:-116.781,0,-98.4353	0/0:296:295,1:295:10506:1:36:0,-85.5066,-941.86	0/1:282:139,143:139:4979:143:5041:-368.946,0,-363.367	0/0:125:124,1:124:4416:1:32:0,-34.4294,-394.413	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/0:182:182,0:182:6513:0:0:0,-54.7875,-586.252	0/0:216:215,0:215:7672:0:0:0,-64.7214,-690.156	0/1:171:92,79:92:3308:79:2820:-202.564,0,-246.461	0/0:164:164,0:164:5858:0:0:0,-49.3689,-527.329	0/0:118:118,0:118:4195:0:0:0,-35.5215,-377.734	0/1:152:80,72:80:2844:72:2580:-186.693,0,-210.443	0/1:114:55,59:55:1972:59:2072:-152.431,0,-143.437	0/0:119:119,0:119:4244:0:0:0,-35.8226,-382.141	0/0:108:108,0:108:3872:0:0:0,-32.5112,-348.674	0/0:97:97,0:97:3468:0:0:0,-29.1999,-312.332	0/1:55:18,37:18:644:37:1324:-102.905,0,-41.7339	0/0:56:56,0:56:2003:0:0:0,-16.8577,-180.543	0/1:67:40,27:40:1421:27:956:-66.1867,0,-108.016	0/1:341:147,194:147:5241:194:6880:-516.618,0,-369.177	0/0:312:310,2:310:11021:2:72:0,-87.0846,-984.95	0/1:256:104,152:104:3728:152:5297:-399.8,0,-258.657	0/1:221:108,113:108:3850:113:4014:-294.921,0,-280.166	0/1:129:63,66:63:2260:66:2335:-171.575,0,-164.7	0/0:196:196,0:196:7025:0:0:0,-59.0019,-632.309	0/1:440:220,220:220:7892:220:7760:-565.977,0,-577.85	0/0:573:572,1:572:20365:1:36:0,-168.892,-1828.76	0/0:41:41,0:41:1456:0:0:0,-12.3422,-131.336	0/0:362:361,1:361:12911:1:36:0,-105.375,-1158.2	0/1:218:122,96:122:4376:96:3424:-242.75,0,-328.388	0/0:205:205,0:205:7333:0:0:0,-61.7111,-660.018	0/1:19:10,9:10:360:9:320:-23.4228,0,-27.0247	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/0:13:13,0:13:445:0:0:0,-3.91339,-40.3754	0/0:28:28,0:28:981:0:0:0,-8.42884,-88.601	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:265:132,133:132:4705:133:4716:-344.83,0,-343.837	0/1:219:121,98:121:4320:98:3474:-246.945,0,-323.052	0/0:94:94,0:94:3350:0:0:0,-28.2968,-301.717	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.8309	0/1:176:93,83:93:3291:83:2881:-206.542,0,-243.428	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/0:281:281,0:281:10009:0:0:0,-84.5894,-900.75	0/0:101:101,0:101:3598:0:0:0,-30.404,-324.027	0/1:81:41,40:41:1460:40:1388:-100.831,0,-107.313	0/1:236:143,93:143:5085:93:3317:-227.704,0,-386.75	0/1:184:78,106:78:2783:106:3797:-286.536,0,-195.321	0/0:194:190,4:190:6782:4:144:0,-45.0862,-597.138	0/1:225:121,104:121:4301:104:3700:-265.471,0,-319.534	0/1:250:103,147:103:3677:147:5246:-397.018,0,-255.875	0/0:244:244,0:244:8705:0:0:0,-73.4513,-783.441	0/1:39:11,28:11:396:28:993:-77.9423,0,-24.2426	0/0:282:281,1:281:10033:1:32:0,-81.6911,-899.706	0/1:144:77,67:77:2738:67:2351:-168.497,0,-203.314	0/0:15:15,0:15:527:0:0:0,-4.51545,-47.7602	0/1:228:114,114:114:4054:114:4077:-298.48,0,-296.411	0/0:70:70,0:70:2512:0:0:0,-21.0721,-226.332	0/1:27:9,18:9:324:18:648:-50.5241,0,-21.378	0/1:20:12,8:12:432:8:288:-20.2468,0,-33.2006	0/0:365:363,2:363:12945:2:57:0,-104.463,-1159.45	0/1:158:79,79:79:2819:79:2779:-202.787,0,-206.386	0/1:24:14,10:14:500:10:360:-25.5196,0,-38.1115	0/1:165:74,91:74:2660:91:3245:-242.6,0,-189.975	0/1:349:169,180:169:6028:180:6376:-468.871,0,-437.565	0/1:94:46,48:46:1644:48:1701:-125.077,0,-119.952	0/0:123:123,0:123:4361:0:0:0,-37.0267,-392.667	0/1:283:131,152:131:4674:152:5384:-399.5,0,-335.628	0/1:295:107,188:107:3809:188:6653:-510.047,0,-254.204	0/1:96:49,47:49:1752:47:1651:-119.977,0,-129.065	0/0:116:116,0:116:4156:0:0:0,-34.9195,-374.223	0/1:77:37,40:37:1328:40:1428:-105.638,0,-96.6429	0/1:42:29,13:29:1044:13:453:-28.4564,0,-81.6315	0/0:210:210,0:210:7484:0:0:0,-63.2163,-673.605	0/1:132:64,68:64:2279:68:2434:-179.578,0,-165.636	0/1:322:132,190:132:4717:190:6769:-512.354,0,-327.757	0/0:212:212,0:212:7588:0:0:0,-63.8184,-682.956	0/0:210:210,0:210:7485:0:0:0,-63.2163,-673.693	0/1:100:51,49:51:1828:49:1737:-126.51,0,-134.698	0/1:28:13,15:13:468:15:540:-40.5077,0,-34.0308	0/1:188:99,89:99:3517:89:3162:-228.209,0,-260.144	0/0:137:137,0:137:4901:0:0:0,-41.2411,-441.24	0/0:244:243,1:243:8646:1:36:0,-69.853,-774.537	0/1:73:47,26:47:1688:26:920:-61.1419,0,-130.232	0/0:92:92,0:92:3296:0:0:0,-27.6948,-296.859	0/0:77:77,0:77:2738:0:0:0,-23.1793,-246.662	0/1:180:85,95:85:2992:95:3363:-248.701,0,-215.328	0/0:43:43,0:43:1523:0:0:0,-12.9443,-137.362	0/1:88:53,35:53:1900:35:1232:-84.6931,0,-144.787	0/0:73:73,0:73:2608:0:0:0,-21.9752,-234.968	0/0:113:113,0:113:4044:0:0:0,-34.0164,-364.148	0/1:230:130,100:130:4626:100:3557:-251.101,0,-347.268	0/1:117:41,76:41:1460:76:2677:-205.955,0,-96.4755	0/0:186:186,0:186:6574:0:0:0,-55.9916,-591.744	0/0:140:139,1:139:4975:1:36:0,-38.5459,-444.3
chr11	1773413	.	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chr11	1773602	.	A	G	46441.7	PASS	AB=0.489838;ABP=8.17363;AC=40;AF=0.212766;AN=188;AO=2938;CIGAR=1X;DP=20439;DPB=20439;DPRA=1.01741;EPP=6382.8;EPPR=37992.9;GTI=2;LEN=1;MEANALT=1.05085;MQM=59.9486;MQMR=59.9696;NS=94;NUMALT=1;ODDS=3.15046;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105084;QR=626960;RO=17495;RPL=2938;RPP=6382.8;RPPR=37992.9;RPR=0;RUN=1;SAF=0;SAP=6382.8;SAR=2938;SRF=0;SRP=37992.9;SRR=17495;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:96:96,0:96:3452:0:0:0,-28.8989,-310.891	0/1:93:63,30:63:2260:30:1068:-68.4363,0,-175.667	0/1:106:46,60:46:1656:60:2144:-161.316,0,-117.419	0/1:226:125,100:125:4492:100:3575:-253.866,0,-336.338	0/0:66:66,0:66:2360:0:0:0,-19.868,-212.659	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/0:96:96,0:96:3440:0:0:0,-28.8989,-309.813	0/0:215:214,1:214:7657:1:36:0,-61.1232,-685.564	0/1:165:74,90:74:2645:90:3202:-238.663,0,-188.566	0/0:53:53,0:53:1900:0:0:0,-15.9546,-171.278	0/0:424:424,0:424:15213:0:0:0,-127.637,-1368.88	0/1:107:51,56:51:1832:56:2012:-149.143,0,-132.951	0/1:70:18,52:18:644:52:1864:-146.967,0,-37.2103	0/0:102:102,0:102:3645:0:0:0,-30.7051,-328.253	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/0:51:51,0:51:1823:0:0:0,-15.3525,-164.35	0/1:52:26,26:26:936:26:936:-68.9059,0,-68.9059	0/0:37:37,0:37:1332:0:0:0,-11.1381,-120.182	0/1:66:53,13:53:1892:13:468:-22.5917,0,-150.69	0/1:223:127,96:127:4525:96:3436:-242.324,0,-340.271	0/0:180:180,0:180:6452:0:0:0,-54.1854,-580.765	0/1:128:37,91:37:1328:91:3236:-252.932,0,-81.2904	0/1:263:132,130:132:4736:130:4663:-340.636,0,-347.207	0/1:36:23,13:23:824:13:464:-31.2604,0,-63.6462	0/0:114:113,0:113:4052:0:0:0,-34.0164,-364.016	0/1:261:124,137:124:4452:137:4887:-360.478,0,-322.278	0/0:242:241,1:241:8620:1:36:0,-69.251,-772.195	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/0:256:252,4:252:9013:4:144:0,-63.7501,-797.834	0/1:177:84,93:84:2986:93:3329:-246.544,0,-215.687	0/0:256:256,0:256:9158:0:0:0,-77.0637,-824.183	0/0:418:410,8:410:14731:8:288:0,-99.5631,-1299.23	0/0:992:989,3:989:35451:3:108:0,-288.547,-3179.13	0/0:1045:1042,3:1042:37321:3:108:0,-304.501,-3347.59	0/0:1876:1876,0:1876:67152:0:0:0,-564.732,-6040.77	0/0:1002:1002,0:1002:35974:0:0:0,-301.632,-3236.42	0/1:168:79,89:79:2835:89:3179:-235.761,0,-204.814	0/1:144:75,69:75:2677:69:2476:-179.728,0,-197.825	0/0:334:334,0:334:11988:0:0:0,-100.544,-1078.76	0/0:328:327,1:327:11686:1:36:0,-95.171,-1048.04	0/1:173:112,61:112:4001:61:2188:-145.107,0,-308.2	0/0:172:172,0:172:6168:0:0:0,-51.7772,-555.203	0/0:236:236,0:236:8424:0:0:0,-71.0431,-758.162	0/0:57:55,2:55:1955:2:72:0,-10.322,-169.388	0/1:46:14,32:14:500:32:1140:-89.0613,0,-31.4888	0/1:154:58,96:58:2061:96:3440:-262.753,0,-139.401	0/1:121:61,60:61:2181:60:2131:-155.633,0,-160.13	0/0:195:190,5:190:6804:5:176:0,-42.5158,-596.244	0/1:86:51,35:51:1832:35:1256:-87.4567,0,-139.272	0/1:128:63,65:63:2260:65:2336:-171.963,0,-165.131	0/0:122:121,0:121:4348:0:0:0,-36.4246,-391.132	0/0:502:494,8:494:17723:8:288:0,-124.85,-1568.41	0/0:129:129,0:129:4636:0:0:0,-38.8329,-417.401	0/1:69:46,23:46:1637:23:816:-52.9888,0,-126.837	0/0:702:701,0:701:25148:0:0:0,-211.022,-2262.25	0/1:116:50,66:50:1800:66:2348:-176.657,0,-127.363	0/0:56:56,0:56:2008:0:0:0,-16.8577,-180.993	0/0:513:505,8:505:18120:8:288:0,-128.161,-1604.11	0/0:461:455,6:455:16320:6:216:0,-118.984,-1448.68	0/0:106:106,0:106:3800:0:0:0,-31.9092,-342.197	0/1:117:56,61:56:2004:61:2196:-162.682,0,-145.413	0/0:344:341,3:341:12225:3:108:0,-93.4791,-1090.01	0/1:136:20,116:20:720:116:4160:-333.642,0,-24.1887	0/1:214:96,118:96:3448:118:4240:-317.357,0,-246.111	0/1:76:34,42:34:1220:42:1508:-113.136,0,-87.2285	0/0:83:82,1:82:2940:1:36:0,-21.3872,-261.236	0/1:231:113,118:113:4024:118:4223:-310.713,0,-292.81	0/1:150:43,107:43:1540:107:3819:-298.752,0,-93.7386	0/0:314:296,18:296:10605:18:646:0,-36.0521,-895.87	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/1:31:14,17:14:500:17:607:-45.627,0,-36.0042	0/0:430:404,26:404:14484:26:936:0,-44.8834,-1218.25	0/0:170:168,2:168:6007:2:68:0,-44.7174,-534.274	0/1:115:50,65:50:1796:65:2333:-175.611,0,-127.304	0/1:395:190,205:190:6782:205:7304:-538.505,0,-491.526	0/0:156:156,0:156:5604:0:0:0,-46.9607,-504.48	0/0:163:163,0:163:5836:0:0:0,-49.0679,-525.352	0/1:97:49,48:49:1756:48:1720:-125.886,0,-129.124	0/0:476:459,17:459:16460:17:612:0,-87.8768,-1425.64	0/1:115:50,65:50:1800:65:2327:-175.071,0,-127.664	0/0:113:112,1:112:4012:1:36:0,-30.4181,-357.652	0/0:242:242,0:242:8653:0:0:0,-72.8493,-777.654	0/1:49:19,30:19:684:30:1064:-81.3212,0,-47.1399	0/0:58:58,0:58:2088:0:0:0,-17.4597,-188.19	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/1:125:58,67:58:2084:67:2388:-177.549,0,-150.201	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.7218	0/1:63:27,36:27:968:36:1292:-97.6189,0,-68.4701	0/0:77:77,0:77:2763:0:0:0,-23.1793,-248.91	0/0:339:339,0:339:12171:0:0:0,-102.049,-1095.13	0/1:526:475,51:475:17045:51:1803:-4.20882,0,-1375.34	0/1:139:48,91:48:1724:91:3268:-252.496,0,-113.602	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/0:66:66,0:66:2359:0:0:0,-19.868,-212.568
chr11	1815119	.	G	A	20343.2	PASS	AB=0.424824;ABP=156.458;AC=50;AF=0.265957;AN=188;AO=1341;CIGAR=1X;DP=5607;DPB=5607;DPRA=1.16533;EPP=2837.31;EPPR=9140.91;GTI=2;LEN=1;MEANALT=1.09259;MQM=59.9724;MQMR=59.5906;NS=94;NUMALT=1;ODDS=2.49638;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46889;QR=152108;RO=4260;RPL=9;RPP=2837.31;RPPR=9149.55;RPR=1332;RUN=1;SAF=1341;SAP=2914.95;SAR=0;SRF=4259;SRP=9244.8;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.3195	0/1:32:16,16:16:576:16:568:-41.8189,0,-42.5195	0/1:69:36,33:36:1281:33:1141:-82.2223,0,-94.7632	0/1:193:116,77:116:4153:77:2631:-178.932,0,-315.789	0/0:18:18,0:18:633:0:0:0,-5.41854,-57.2951	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7726	0/0:62:62,0:62:2213:0:0:0,-18.6639,-199.399	0/0:83:83,0:83:2959:0:0:0,-24.9855,-266.345	0/1:50:37,13:37:1332:13:449:-25.686,0,-105.108	0/0:73:73,0:73:2612:0:0:0,-21.9752,-235.19	0/0:31:31,0:31:1107:0:0:0,-9.33193,-99.932	0/1:76:42,34:42:1512:34:1198:-85.2448,0,-113.496	0/1:69:27,42:27:972:42:1496:-114.163,0,-66.9819	0/0:58:58,0:58:2072:0:0:0,-17.4597,-186.701	0/0:48:48,0:48:1690:0:0:0,-14.4494,-152.321	0/0:41:40,1:40:1408:1:36:0,-8.74395,-123.389	0/1:29:13,16:13:456:16:572:-43.0836,0,-32.6342	0/0:42:42,0:42:1481:0:0:0,-12.6433,-133.582	0/1:21:11,10:11:396:10:356:-26.0596,0,-29.6611	0/1:60:50,10:50:1760:10:348:-13.5933,0,-140.611	0/0:136:136,0:136:4845:0:0:0,-40.9401,-436.172	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	0/1:86:50,36:50:1792:36:1254:-87.2695,0,-135.674	0/1:18:14,4:14:500:4:144:-7.8935,0,-39.9176	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.51	0/1:181:106,75:106:3800:75:2630:-182.46,0,-287.702	0/0:130:130,0:130:4664:0:0:0,-39.1339,-419.841	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.3858	0/0:168:168,0:168:6016:0:0:0,-50.573,-541.506	0/1:88:51,37:51:1802:37:1286:-89.5461,0,-135.934	0/0:54:54,0:54:1921:0:0:0,-16.2556,-173.135	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7542	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:112:65,47:65:2340:47:1658:-115.79,0,-177.131	0/1:55:41,13:41:1476:13:445:-23.7982,0,-116.56	0/0:32:31,1:31:1112:1:32:0,-6.43365,-96.9148	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:108:75,33:75:2696:33:1139:-70.298,0,-210.277	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.561	0/0:92:90,2:90:3217:2:72:0,-20.858,-282.873	0/0:35:35,0:35:1260:0:0:0,-10.536,-113.705	0/1:50:27,23:27:960:23:797:-56.9944,0,-71.6566	0/1:65:52,13:52:1822:13:464:-22.5306,0,-144.685	0/1:39:22,16:22:788:16:572:-40.0531,0,-59.431	0/0:94:94,0:94:3320:0:0:0,-28.2968,-298.987	0/1:38:12,26:12:424:26:928:-72.3991,0,-27.0408	0/1:102:66,36:66:2352:36:1216:-79.0274,0,-181.226	0/0:49:49,0:49:1741:0:0:0,-14.7505,-156.968	0/1:6:3,3:3:108:3:89:-6.49818,0,-8.26899	0/0:81:81,0:81:2887:0:0:0,-24.3834,-259.976	0/1:51:28,22:28:1004:22:761:-53.397,0,-75.2609	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:117:69,48:69:2457:48:1646:-113.201,0,-186.137	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.483	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/0:55:54,0:54:1898:0:0:0,-16.2556,-170.691	0/1:76:37,39:37:1332:39:1380:-101.62,0,-97.2926	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.55181	0/1:71:43,27:43:1536:27:941:-63.6279,0,-117.16	0/1:123:78,45:78:2785:45:1600:-107.264,0,-213.827	0/1:43:18,25:18:640:25:875:-66.1218,0,-44.929	0/0:62:62,0:62:2207:0:0:0,-18.6639,-198.888	0/1:108:65,43:65:2313:43:1468:-99.892,0,-175.898	0/1:97:37,60:37:1328:60:2059:-156.374,0,-90.6056	0/1:36:20,16:20:720:16:572:-40.9763,0,-54.2917	0/0:41:41,0:41:1457:0:0:0,-12.3422,-131.357	0/1:49:27,22:27:972:22:773:-55.139,0,-73.0428	0/1:33:17,16:17:593:16:572:-41.8794,0,-43.7607	0/0:82:82,0:82:2912:0:0:0,-24.6845,-262.238	0/1:71:41,30:41:1463:30:1065:-74.7863,0,-110.592	0/1:129:81,48:81:2851:48:1651:-110.037,0,-217.964	0/0:200:200,0:200:7177:0:0:0,-60.206,-645.955	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.1525	0/1:85:56,29:56:2012:29:1025:-66.9698,0,-155.766	0/1:15:8,7:8:288:7:241:-17.5059,0,-21.7158	0/1:86:51,35:51:1824:35:1222:-84.3909,0,-138.309	0/0:65:65,0:65:2327:0:0:0,-19.5669,-209.569	0/0:139:139,0:139:4967:0:0:0,-41.8432,-447.107	0/1:32:23,9:23:828:9:305:-18.1443,0,-65.2112	0/0:69:68,1:68:2433:1:36:0,-17.1728,-215.595	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.53	0/1:102:56,46:56:2008:46:1625:-115.832,0,-150.28	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2496	0/1:51:26,25:26:924:25:896:-65.6078,0,-68.1245	0/0:63:63,0:63:2264:0:0:0,-18.9649,-203.678	0/0:51:51,0:51:1817:0:0:0,-15.3525,-163.796	0/1:102:43,59:43:1539:59:2087:-157.39,0,-108.097	0/1:61:17,44:17:608:44:1564:-122.689,0,-36.681	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:63:59,3:59:2116:3:108:0,-8.94784,-180.634
chr11	1815151	.	GGA	TGA	86888.2	PASS	AB=0.546043;ABP=62.7984;AC=138;AF=0.734043;AN=188;AO=4211;CIGAR=1X2M;DP=5712;DPB=5718;DPRA=12.2731;EPP=9138.4;EPPR=2593.27;GTI=2;LEN=1;MEANALT=1.23656;MQM=59.5787;MQMR=59.9851;NS=94;NUMALT=1;ODDS=1.82185;PAIRED=0;PAIREDR=0;PAO=6;PQA=208;PQR=0;PRO=6;QA=150266;QR=50163;RO=1474;RPL=4209;RPP=9129.72;RPPR=2593.27;RPR=2;RUN=1;SAF=4208;SAP=9121.04;SAR=3;SRF=1474;SRP=3203.76;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:25:0,25:0:0:25:892:-80.5981,-7.52575,0	0/1:33:17,16:17:602:16:568:-41.4954,0,-44.5755	0/1:74:36,37:36:1226:37:1320:-96.7893,0,-88.3788	0/1:191:74,117:74:2540:117:4152:-316.277,0,-171.291	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:62:0,62:0:0:62:2220:-200.031,-18.6639,0	1/1:82:0,80:0:0:80:2849:-255.881,-24.0824,0	0/1:53:16,37:16:560:37:1328:-103.859,0,-34.7736	1/1:71:0,70:0:0:70:2504:-225.118,-21.0721,0	1/1:31:0,31:0:0:31:1108:-100.023,-9.33193,0	0/1:74:33,41:33:1123:41:1464:-109.713,0,-79.0259	0/1:74:44,30:44:1491:30:1079:-74.8315,0,-112.202	1/1:60:0,60:0:0:60:2135:-192.385,-18.0618,0	1/1:49:0,49:0:0:49:1751:-157.754,-14.7505,0	1/1:42:1,41:1:36:41:1463:-128.337,-9.04499,0	0/1:30:18,12:18:614:12:428:-29.8053,0,-46.5486	1/1:43:0,42:0:0:42:1499:-134.952,-12.6433,0	0/1:19:8,11:8:274:11:396:-30.2632,0,-19.2726	0/1:60:12,47:12:408:47:1676:-132.999,0,-18.9266	1/1:133:0,132:0:0:132:4713:-423.914,-39.736,0	0/1:26:19,7:19:662:7:252:-15.2022,0,-52.0766	0/1:86:36,50:36:1265:50:1787:-135.164,0,-88.2055	0/1:19:5,14:5:170:14:504:-39.9785,0,-9.91377	1/1:37:0,37:0:0:37:1324:-119.435,-11.1381,0	0/1:189:78,110:78:2623:110:3948:-298.482,0,-179.306	1/1:126:0,126:0:0:126:4509:-405.897,-37.9298,0	1/1:17:0,17:0:0:17:595:-53.8491,-5.11751,0	1/1:165:0,164:0:0:164:5867:-527.912,-49.3689,0	0/1:89:39,50:39:1307:50:1760:-131.861,0,-91.1311	1/1:53:0,50:0:0:50:1778:-159.95,-15.0515,0	0/0:5:5,0:5:167:0:0:0,-1.50515,-15.3585	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:6:0,6:0:0:6:216:-19.7542,-1.80618,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/1:114:49,65:49:1674:65:2318:-174.549,0,-116.624	0/1:63:20,43:20:633:43:1540:-119.914,0,-38.3032	1/1:31:1,30:1:28:30:1068:-93.3551,-6.5322,0	0/1:5:3,2:3:106:2:68:-4.95256,0,-8.38395	0/1:114:38,76:38:1283:76:2716:-210.273,0,-81.4458	1/1:13:0,13:0:0:13:464:-42.0837,-3.91339,0	1/1:92:2,90:2:72:90:3207:-282.072,-21.0181,0	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	0/1:52:25,27:25:843:27:968:-71.7756,0,-60.5236	0/1:70:18,50:18:602:50:1778:-139.491,0,-33.6859	0/1:56:31,25:31:1029:25:896:-64.0124,0,-76.052	1/1:94:0,94:0:0:94:3376:-304.025,-28.2968,0	0/1:43:29,14:29:965:14:504:-32.7374,0,-74.2063	0/1:108:41,67:41:1417:67:2382:-182.117,0,-95.3122	1/1:50:0,50:0:0:50:1781:-160.567,-15.0515,0	0/1:6:3,3:3:100:3:108:-8.26899,0,-7.52368	1/1:79:0,78:0:0:78:2804:-252.231,-23.4803,0	0/1:54:23,31:23:820:31:1103:-83.3114,0,-57.8673	1/1:11:0,11:0:0:11:378:-34.3491,-3.31133,0	0/1:118:52,64:52:1735:64:2292:-171.327,0,-121.234	1/1:45:0,45:0:0:45:1592:-143.567,-13.5464,0	0/1:8:6,2:6:214:2:72:-4.42848,0,-17.1995	0/1:8:1,7:1:36:7:248:-20.256,0,-1.19003	1/1:52:0,52:0:0:52:1843:-166.099,-15.6536,0	0/1:76:39,36:39:1352:36:1288:-93.2837,0,-99.0394	0/1:5:3,2:3:100:2:72:-5.33157,0,-7.82471	0/1:71:29,42:29:982:42:1504:-114.281,0,-67.3112	0/1:124:50,72:50:1716:72:2560:-193.477,0,-117.646	0/1:47:30,17:30:993:17:612:-41.2089,0,-75.5214	1/1:64:0,63:0:0:63:2206:-198.591,-18.9649,0	0/1:125:61,62:61:2067:62:2219:-162.624,0,-148.962	0/1:99:63,36:63:2159:36:1273:-85.0525,0,-164.775	0/1:36:16,20:16:541:20:720:-54.2917,0,-38.1719	1/1:42:0,42:0:0:42:1508:-135.947,-12.6433,0	0/1:52:25,27:25:876:27:960:-71.0581,0,-63.5025	0/1:31:15,16:15:526:16:563:-41.5899,0,-38.26	1/1:84:0,84:0:0:84:3016:-271.58,-25.2865,0	0/1:72:30,42:30:1047:42:1495:-113.169,0,-72.863	0/1:125:53,72:53:1777:72:2567:-193.572,0,-122.514	1/1:202:0,200:0:0:200:7134:-641.742,-60.206,0	1/1:16:0,16:0:0:16:572:-51.7909,-4.81648,0	0/1:83:29,54:29:988:54:1922:-148.27,0,-64.2377	0/1:14:6,8:6:214:8:288:-22.0168,0,-15.3933	0/1:93:43,49:43:1454:49:1756:-130.149,0,-103.094	1/1:62:0,62:0:0:62:2200:-198.195,-18.6639,0	1/1:136:1,135:1:36:135:4839:-431.974,-37.3418,0	0/1:30:9,21:9:312:21:756:-59.3363,0,-19.3841	1/1:70:1,69:1:36:69:2445:-216.667,-17.4738,0	1/1:43:0,43:0:0:43:1517:-136.818,-12.9443,0	0/1:102:48,54:48:1596:54:1932:-143.45,0,-113.214	1/1:8:0,8:0:0:8:288:-26.2496,-2.40824,0	0/1:52:25,26:25:830:26:936:-68.924,0,-59.3704	1/1:63:0,63:0:0:63:2226:-200.305,-18.9649,0	1/1:51:0,51:0:0:51:1820:-164.068,-15.3525,0	0/1:107:63,44:63:2164:44:1574:-109.47,0,-162.816	0/1:67:49,18:49:1664:18:640:-37.7521,0,-129.874	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:63:3,60:3:108:60:2147:-183.413,-8.88972,0
chr11	2278613	.	G	C	13190.1	PASS	AB=0.352459;ABP=533.562;AC=47;AF=0.25;AN=188;AO=992;CIGAR=1X;DP=6494;DPB=6494;DPRA=0.745197;EPP=2157.11;EPPR=11937.4;GTI=7;LEN=1;MEANALT=1.06122;MQM=60;MQMR=59.9967;NS=94;NUMALT=1;ODDS=2.18467;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=35172;QR=194098;RO=5496;RPL=0;RPP=2157.11;RPPR=11937.4;RPR=992;RUN=1;SAF=0;SAP=2157.11;SAR=992;SRF=0;SRP=11937.4;SRR=5496;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:29:29,0:29:1023:0:0:0,-8.72987,-92.3817	0/1:42:26,16:26:923:16:572:-39.1702,0,-70.7435	0/0:84:83,0:83:2935:0:0:0,-24.9855,-264.026	0/1:96:76,20:76:2683:20:701:-34.5128,0,-212.815	0/0:57:57,0:57:2032:0:0:0,-17.1587,-183.153	0/0:32:32,0:32:1135:0:0:0,-9.63296,-102.458	0/0:100:100,0:100:3508:0:0:0,-30.103,-315.929	0/0:105:105,0:105:3701:0:0:0,-31.6081,-333.29	0/1:50:43,7:43:1521:7:248:-7.61269,0,-122.13	0/0:85:85,0:85:2976:0:0:0,-25.5875,-268.069	0/0:70:70,0:70:2446:0:0:0,-21.0721,-220.393	0/1:50:24,26:24:860:26:920:-68.0656,0,-62.6703	0/1:38:19,19:19:676:19:676:-49.7289,0,-49.7289	0/0:64:64,0:64:2216:0:0:0,-19.2659,-199.702	0/0:35:35,0:35:1229:0:0:0,-10.536,-110.912	0/0:59:59,0:59:2061:0:0:0,-17.7608,-185.76	0/1:45:26,19:26:920:19:680:-47.9828,0,-69.5707	0/1:35:16,19:16:572:19:676:-50.6319,0,-41.2774	0/1:36:21,15:21:739:15:536:-37.7377,0,-55.9953	0/1:121:97,23:97:3416:23:817:-37.5111,0,-271.321	0/0:77:77,0:77:2701:0:0:0,-23.1793,-243.333	0/1:55:37,18:37:1289:18:644:-41.7339,0,-99.7519	0/1:37:27,10:27:964:10:360:-21.6062,0,-75.9387	0/1:23:4,19:4:144:19:661:-52.8879,0,-6.38993	0/0:77:74,2:74:2631:2:72:0,-16.4014,-230.201	0/1:168:110,58:110:3855:58:2051:-134.288,0,-296.575	0/0:167:167,0:167:5931:0:0:0,-50.272,-533.901	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:278:278,0:278:9765:0:0:0,-83.6863,-878.81	0/1:70:50,20:50:1754:20:708:-42.9735,0,-137.07	0/0:117:117,0:117:4141:0:0:0,-35.2205,-372.874	0/1:24:12,12:12:432:12:432:-31.9965,0,-31.9965	0/0:26:25,1:25:887:1:36:0,-4.2285,-76.5498	0/0:9:9,0:9:320:0:0:0,-2.70927,-29.1424	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:143:66,77:66:2328:77:2735:-203.346,0,-166.731	0/1:134:99,34:99:3523:34:1208:-68.6294,0,-276.884	0/0:67:67,0:67:2379:0:0:0,-20.169,-214.368	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/0:103:103,0:103:3654:0:0:0,-31.0061,-329.066	0/0:45:45,0:45:1586:0:0:0,-13.5463,-143.029	0/0:123:123,0:123:4365:0:0:0,-37.0267,-393.026	0/0:50:50,0:50:1773:0:0:0,-15.0515,-159.851	0/1:37:21,16:21:748:16:554:-39.0468,0,-56.5072	0/1:60:50,10:50:1760:10:347:-13.5018,0,-140.622	0/1:72:63,9:63:2187:9:324:-7.8317,0,-175.418	0/0:96:95,0:95:3347:0:0:0,-28.5978,-301.088	0/1:69:50,19:50:1740:19:684:-41.1193,0,-136.11	0/1:73:47,26:47:1632:26:936:-62.5843,0,-125.19	0/0:151:151,0:151:5340:0:0:0,-45.4555,-480.736	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	0/0:143:143,0:143:5040:0:0:0,-43.0473,-453.747	0/1:51:34,17:34:1194:17:599:-38.8856,0,-92.4112	0/1:12:10,2:10:341:2:72:-3.22436,0,-27.4054	0/1:46:34,12:34:1203:12:419:-24.1953,0,-94.7277	0/1:53:30,23:30:1064:23:820:-58.1679,0,-80.1171	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/1:23:13,10:13:460:10:360:-25.8206,0,-34.8117	0/0:102:102,0:102:3605:0:0:0,-30.7051,-324.658	0/1:110:56,54:56:1976:54:1918:-139.782,0,-144.999	0/1:10:5,5:5:172:5:176:-13.1747,0,-12.8077	0/1:148:109,39:109:3849:39:1375:-79.4954,0,-302.054	0/1:127:83,44:83:2938:44:1549:-101.469,0,-226.424	0/1:39:30,9:30:1068:9:324:-17.7657,0,-84.6919	0/0:71:71,0:71:2535:0:0:0,-21.3731,-228.401	0/1:76:38,38:38:1334:38:1356:-99.4622,0,-97.4801	0/0:68:68,0:68:2406:0:0:0,-20.47,-216.796	0/1:16:8,8:8:288:8:265:-19.3556,0,-21.4509	0/0:50:49,0:49:1736:0:0:0,-14.7505,-156.165	0/1:53:29,24:29:1023:24:856:-61.4065,0,-76.4271	0/1:27:15,12:15:536:12:432:-31.0934,0,-40.3603	0/0:104:104,0:104:3648:0:0:0,-31.3071,-328.526	0/1:35:25,10:25:891:10:356:-21.8452,0,-69.9727	0/0:148:148,0:148:5235:0:0:0,-44.5524,-471.292	0/0:139:139,0:139:4949:0:0:0,-41.8432,-445.561	0/0:115:115,0:115:4066:0:0:0,-34.6184,-366.128	0/1:50:37,13:37:1311:13:445:-25.3239,0,-103.239	0/1:15:11,4:11:396:4:144:-8.79817,0,-31.4673	0/1:63:51,12:51:1812:12:432:-20.2563,0,-144.397	0/0:96:96,0:96:3376:0:0:0,-28.8989,-304.056	0/0:165:165,0:165:5855:0:0:0,-49.6699,-527.065	0/1:91:59,32:59:2104:32:1124:-74.0715,0,-162.236	0/0:44:44,0:44:1555:0:0:0,-13.2453,-140.241	0/0:38:38,0:38:1330:0:0:0,-11.4391,-119.998	0/1:79:45,34:45:1603:34:1194:-83.9821,0,-120.778	0/0:38:38,0:38:1338:0:0:0,-11.4391,-120.718	0/1:39:20,19:20:707:19:672:-49.0667,0,-52.2144	0/0:49:49,0:49:1743:0:0:0,-14.7505,-157.154	0/0:65:65,0:65:2336:0:0:0,-19.5669,-210.499	0/1:109:64,45:64:2284:45:1607:-112.107,0,-173.01	0/1:42:13,29:13:451:29:1027:-80.0989,0,-28.2766	0/0:65:65,0:65:2248:0:0:0,-19.5669,-202.581	0/0:54:54,0:54:1916:0:0:0,-16.2556,-172.717
chr11	2521118	.	A	G	169191	PASS	AB=0.474967;ABP=90.3091;AC=56;AF=0.297872;AN=188;AO=7629;CIGAR=1X;DP=26603;DPB=26603;DPRA=1.45595;EPP=16569.2;EPPR=41172;GTI=0;LEN=1;MEANALT=1.09375;MQM=58.5172;MQMR=59.7794;NS=94;NUMALT=1;ODDS=17.5934;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=270454;QR=677322;RO=18967;RPL=4670;RPP=836.282;RPPR=3607.44;RPR=2959;RUN=1;SAF=4670;SAP=836.282;SAR=2959;SRF=12289;SRP=3607.44;SRR=6678;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:105:68,37:68:2361:37:1299:-85.2201,0,-181.101	0/1:396:217,179:217:7699:179:6363:-453.397,0,-573.663	0/1:421:239,182:239:8564:182:6475:-455.484,0,-643.718	0/1:692:384,307:384:13740:307:10890:-770.844,0,-1028.05	0/0:183:183,0:183:6542:0:0:0,-55.0885,-588.837	0/0:180:180,0:180:6448:0:0:0,-54.1854,-580.373	0/1:307:155,152:155:5527:152:5395:-392.503,0,-405.134	0/1:492:294,198:294:10521:198:7013:-482.755,0,-798.624	0/1:205:112,93:112:3990:93:3256:-230.503,0,-297.354	0/1:347:222,124:222:7918:124:4359:-287.575,0,-608.102	0/0:162:162,0:162:5757:0:0:0,-48.7669,-518.201	0/1:226:115,111:115:4104:111:3931:-285.832,0,-301.5	0/1:163:84,79:84:3003:79:2786:-201.803,0,-221.425	0/1:168:95,73:95:3396:73:2551:-179.151,0,-255.233	0/0:169:168,0:168:5973:0:0:0,-50.573,-537.306	0/0:160:160,0:160:5715:0:0:0,-48.1648,-514.459	0/1:163:86,77:86:3070:77:2727:-196.455,0,-227.407	0/0:108:108,0:108:3876:0:0:0,-32.5112,-349.02	0/1:80:37,43:37:1319:43:1530:-113.788,0,-94.9288	0/1:574:322,251:322:11530:251:8884:-626.182,0,-864.696	0/1:468:238,230:238:8432:230:8132:-590.776,0,-617.761	0/1:335:131,204:131:4687:204:7231:-549.868,0,-321.141	0/1:414:248,166:248:8814:166:5910:-407.15,0,-668.307	0/1:233:126,107:126:4504:107:3816:-273.104,0,-335.36	0/0:317:317,0:317:11331:0:0:0,-95.4265,-1019.52	0/1:1032:568,463:568:20302:463:16402:-1164.47,0,-1515.18	0/0:614:613,1:613:21890:1:36:0,-181.234,-1965.79	0/0:90:90,0:90:3219:0:0:0,-27.0927,-289.903	0/0:845:844,1:844:30210:1:36:0,-250.773,-2714.18	0/1:463:230,233:230:8195:233:8298:-606.548,0,-597.548	0/0:445:445,0:445:15895:0:0:0,-133.958,-1428.93	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:62:62,0:62:2232:0:0:0,-18.6639,-201.107	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:65:65,0:65:2340:0:0:0,-19.5669,-210.859	0/1:529:275,254:275:9820:254:8977:-648.411,0,-724.486	0/0:529:528,1:528:18937:1:36:0,-155.647,-1700.15	0/0:138:138,0:138:4913:0:0:0,-41.5421,-442.273	0/1:10:4,6:4:140:6:216:-16.7708,0,-9.93428	0/1:388:211,177:211:7515:177:6304:-450.348,0,-559.548	0/0:82:82,0:82:2904:0:0:0,-24.6845,-261.536	0/0:463:463,0:463:16563:0:0:0,-139.377,-1489.68	0/0:177:177,0:177:6268:0:0:0,-53.2823,-564.213	0/1:158:80,78:80:2853:78:2783:-202.975,0,-209.436	0/1:266:156,110:156:5562:110:3860:-267.203,0,-420.509	0/1:357:191,166:191:6795:166:5899:-423.46,0,-504.019	0/0:540:539,1:539:19285:1:36:0,-158.958,-1731.59	0/1:212:128,84:128:4584:84:2970:-203.555,0,-348.28	0/1:449:241,208:241:8607:208:7407:-531.164,0,-638.777	0/1:405:217,188:217:7752:188:6677:-478.907,0,-575.354	0/1:33:19,14:19:684:14:495:-34.9323,0,-51.6807	0/1:358:188,170:188:6725:170:6053:-437.064,0,-497.51	0/1:198:96,102:96:3448:102:3648:-268.865,0,-250.908	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.607	0/1:349:180,169:180:6414:169:6011:-435.784,0,-471.714	0/0:165:163,2:163:5794:2:72:0,-42.8332,-514.733	0/1:44:34,10:34:1207:10:338:-17.4964,0,-95.6872	0/1:42:20,22:20:720:22:779:-57.7841,0,-52.4855	0/0:222:222,0:222:7885:0:0:0,-66.8287,-709.661	0/1:215:105,110:105:3755:110:3915:-287.609,0,-273.414	0/1:27:15,12:15:540:12:432:-31.0769,0,-40.8087	0/0:673:673,0:673:24013:0:0:0,-202.593,-2159.94	0/1:623:336,287:336:12037:287:10197:-729.011,0,-895.123	0/1:196:95,101:95:3395:101:3592:-264.357,0,-246.754	0/0:258:258,0:258:9234:0:0:0,-77.6657,-831.017	0/1:576:277,298:277:9887:298:10578:-777.53,0,-715.255	0/1:417:168,249:168:6018:249:8788:-664.79,0,-416.189	0/1:88:38,50:38:1355:50:1752:-131.323,0,-95.7591	0/0:177:177,0:177:6318:0:0:0,-53.2823,-568.396	0/1:160:81,79:81:2897:79:2816:-205.445,0,-212.6	0/1:38:10,28:10:360:28:991:-78.0247,0,-21.3052	0/1:293:166,126:166:5923:126:4481:-314.367,0,-444.649	0/1:225:107,118:107:3815:118:4173:-307.908,0,-275.761	0/1:527:264,263:264:9383:263:9247:-673.209,0,-684.934	0/0:581:581,0:581:20807:0:0:0,-174.898,-1871.37	0/0:483:483,0:483:17236:0:0:0,-145.397,-1550.3	0/0:353:350,3:350:12528:3:108:0,-96.1884,-1117.25	0/1:45:16,29:16:576:29:1040:-80.3558,0,-38.6204	0/1:240:122,118:122:4380:118:4184:-304.47,0,-321.705	0/0:475:475,0:475:16969:0:0:0,-142.989,-1526.31	0/0:664:663,1:663:23721:1:36:0,-196.288,-2130.29	0/1:170:88,82:88:3081:82:2903:-210.096,0,-226.315	0/1:162:80,82:80:2845:82:2894:-211.734,0,-207.518	0/1:189:91,98:91:3226:98:3449:-253.631,0,-233.668	0/0:287:287,0:287:10226:0:0:0,-86.3956,-919.791	0/0:59:59,0:59:2079:0:0:0,-17.7608,-187.367	0/1:182:92,90:92:3294:90:3187:-231.515,0,-241.841	0/1:188:96,92:96:3440:92:3268:-237.639,0,-253.203	0/0:115:115,0:115:4080:0:0:0,-34.6184,-367.365	0/1:212:97,115:97:3471:115:4083:-303.566,0,-248.399	0/1:184:60,124:60:2123:124:4423:-342.499,0,-135.949	0/0:375:374,1:374:13375:1:36:0,-109.288,-1199.9	0/0:233:233,0:233:8332:0:0:0,-70.14,-749.733
chr11	2521124	.	G	A	163290	PASS	AB=0.474297;ABP=93.2047;AC=56;AF=0.297872;AN=188;AO=7467;CIGAR=1X;DP=26162;DPB=26162;DPRA=1.44302;EPP=16217.4;EPPR=40572.6;GTI=0;LEN=1;MEANALT=1.04545;MQM=58.5131;MQMR=59.7925;NS=94;NUMALT=1;ODDS=19.0727;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=261829;QR=659568;RO=18691;RPL=4472;RPP=637.419;RPPR=3257.82;RPR=2995;RUN=1;SAF=4472;SAP=637.419;SAR=2995;SRF=11992;SRP=3257.82;SRR=6699;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:96:63,33:63:2202:33:1176:-77.2367,0,-169.507	0/1:379:204,175:204:7139:175:6157:-440.01,0,-528.463	0/1:418:236,182:236:8386:182:6370:-447.426,0,-628.699	0/1:677:376,300:376:13281:300:10406:-732.338,0,-991.226	0/0:178:178,0:178:6241:0:0:0,-53.5833,-561.775	0/0:178:178,0:178:6271:0:0:0,-53.5833,-564.466	0/1:304:156,148:156:5520:148:5170:-373.473,0,-405.404	0/1:487:291,196:291:10232:196:6896:-473.743,0,-774.179	0/1:202:114,88:114:3982:88:3058:-214.065,0,-297.723	0/1:348:223,125:223:7889:125:4395:-290.552,0,-605.262	0/0:164:164,0:164:5689:0:0:0,-49.3689,-512.002	0/1:224:115,109:115:4059:109:3834:-277.78,0,-298.054	0/1:157:82,75:82:2915:75:2663:-192.545,0,-215.321	0/1:162:94,68:94:3289:68:2369:-164.588,0,-247.415	0/0:171:171,0:171:6005:0:0:0,-51.4761,-540.461	0/0:164:164,0:164:5824:0:0:0,-49.3689,-524.266	0/1:158:83,75:83:2924:75:2587:-185.302,0,-215.779	0/0:106:106,0:106:3763:0:0:0,-31.9092,-338.859	0/1:83:39,44:39:1378:44:1548:-114.525,0,-99.3317	0/1:573:320,253:320:11386:253:8884:-626.501,0,-852.127	0/1:428:234,194:234:8126:194:6777:-481.02,0,-601.643	0/1:336:128,207:128:4549:207:7220:-548.67,0,-308.518	0/1:418:256,162:256:9002:162:5684:-385.3,0,-683.736	0/1:226:117,108:117:4133:108:3742:-268.527,0,-304.063	0/0:319:318,1:318:11150:1:36:0,-92.4313,-999.287	0/1:1008:554,454:554:19689:454:15949:-1130.87,0,-1468.05	0/0:615:614,1:614:21697:1:36:0,-181.535,-1948.51	0/0:88:88,0:88:3124:0:0:0,-26.4906,-281.357	0/0:838:837,1:837:29653:1:36:0,-248.666,-2664.2	0/1:450:230,220:230:8016:220:7726:-559.484,0,-585.6	0/0:432:432,0:432:15240:0:0:0,-130.045,-1371.33	0/0:37:37,0:37:1308:0:0:0,-11.1381,-118.022	0/0:59:59,0:59:2076:0:0:0,-17.7608,-186.73	0/0:9:9,0:9:315:0:0:0,-2.70927,-28.6872	0/0:27:27,0:27:955:0:0:0,-8.12781,-86.2648	0/0:68:68,0:68:2387:0:0:0,-20.47,-215.061	0/1:528:273,255:273:9571:255:9028:-653.09,0,-702.411	0/0:528:527,1:527:18744:1:36:0,-155.346,-1682.82	0/0:135:134,1:134:4710:1:36:0,-37.0498,-420.435	0/1:10:4,6:4:144:6:212:-16.406,0,-10.3033	0/1:385:212,173:212:7447:173:6080:-431.062,0,-554.326	0/0:83:83,0:83:2942:0:0:0,-24.9855,-264.982	0/0:449:449,0:449:15759:0:0:0,-135.162,-1417.97	0/0:170:170,0:170:5973:0:0:0,-51.1751,-537.677	0/1:155:80,75:80:2854:75:2665:-193.264,0,-210.43	0/1:256:149,107:149:5212:107:3790:-263.86,0,-392.077	0/1:359:185,174:185:6537:174:6061:-437.304,0,-480.235	0/0:539:538,1:538:19038:1:36:0,-158.657,-1708.75	0/1:215:129,86:129:4559:86:3008:-206.07,0,-345.382	0/1:438:237,201:237:8416:201:6990:-496.982,0,-625.517	0/1:391:210,181:210:7450:181:6352:-453.93,0,-552.678	0/1:32:18,14:18:644:14:468:-32.7883,0,-48.5242	0/1:359:191,168:191:6787:168:5904:-423.337,0,-502.789	0/1:189:89,100:89:3115:100:3535:-261.406,0,-223.683	0/0:47:47,0:47:1654:0:0:0,-14.1484,-149.126	0/1:344:177,167:177:6286:167:5836:-421.594,0,-461.799	0/0:161:160,1:160:5640:1:36:0,-44.8676,-504.119	0/1:43:33,10:33:1171:10:356:-19.4305,0,-92.7497	0/1:41:20,21:20:696:21:735:-54.1237,0,-50.6174	0/0:222:222,0:222:7732:0:0:0,-66.8287,-695.882	0/1:207:107,100:107:3711:100:3526:-254.98,0,-271.874	0/1:24:13,11:13:468:11:373:-26.6563,0,-35.2349	0/0:673:673,0:673:23827:0:0:0,-202.593,-2143.4	0/1:589:324,265:324:11411:265:9290:-658.149,0,-849.356	0/1:196:95,101:95:3341:101:3583:-263.625,0,-241.868	0/0:250:250,0:250:8850:0:0:0,-75.2575,-796.484	0/1:574:274,300:274:9727:300:10515:-773.163,0,-701.442	0/1:412:165,247:165:5881:247:8750:-662.826,0,-405.373	0/1:87:37,50:37:1311:50:1753:-131.672,0,-92.1013	0/0:175:175,0:175:6181:0:0:0,-52.6802,-555.977	0/1:158:79,79:79:2792:79:2779:-202.752,0,-203.917	0/1:39:11,28:11:379:28:983:-77.0027,0,-22.7004	0/1:280:156,124:156:5462:124:4323:-304.84,0,-407.353	0/1:222:105,117:105:3742:117:4139:-305.752,0,-270.097	0/1:508:248,260:248:8670:260:9109:-666.557,0,-626.92	0/0:572:571,0:571:20279:0:0:0,-171.888,-1823.49	0/0:473:473,0:473:16635:0:0:0,-142.387,-1495.68	0/0:342:339,3:339:12026:3:104:0,-93.2494,-1072.5	0/1:47:16,31:16:563:31:1087:-83.9778,0,-36.8475	0/1:236:122,114:122:4337:114:3915:-281.481,0,-319.414	0/0:474:474,0:474:16759:0:0:0,-142.688,-1506.93	0/0:657:656,1:656:23301:1:36:0,-194.181,-2092.82	0/1:155:81,74:81:2791:74:2545:-182.493,0,-204.534	0/1:164:81,83:81:2870:83:2921:-213.562,0,-209.166	0/1:180:86,94:86:2988:94:3285:-241.595,0,-214.968	0/0:277:277,0:277:9589:0:0:0,-83.3853,-862.567	0/0:60:60,0:60:2082:0:0:0,-18.0618,-187.628	0/1:183:90,93:90:3138:93:3275:-239.066,0,-227.547	0/1:189:95,94:95:3376:94:3292:-239.496,0,-247.143	0/0:113:113,0:113:3943:0:0:0,-34.0164,-355.054	0/1:211:96,115:96:3415:115:4042:-300.145,0,-244.04	0/1:178:57,121:57:2013:121:4285:-331.893,0,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chr11	2521143	.	C	A	47423.3	PASS	AB=0.505655;ABP=4.63109;AC=56;AF=0.297872;AN=188;AO=2955;CIGAR=1X;DP=9605;DPB=9605;DPRA=1.35932;EPP=6419.71;EPPR=14341.4;GTI=0;LEN=1;MEANALT=1.05;MQM=56.6203;MQMR=59.5926;NS=94;NUMALT=1;ODDS=4.42919;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=102824;QR=237182;RO=6647;RPL=0;RPP=6419.71;RPPR=14332.7;RPR=2955;RUN=1;SAF=0;SAP=6419.71;SAR=2955;SRF=1;SRP=14428.1;SRR=6646;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:31:19,12:19:684:12:412:-28.0709,0,-52.5308	0/1:80:36,44:36:1288:44:1548:-115.457,0,-92.1111	0/1:101:44,57:44:1576:57:1998:-149.438,0,-111.716	0/1:219:146,73:146:5217:73:2551:-163.51,0,-403.596	0/0:72:72,0:72:2583:0:0:0,-21.6742,-232.704	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.622	0/1:105:53,52:53:1877:52:1784:-129.094,0,-137.592	0/1:145:77,68:77:2743:68:2358:-168.752,0,-203.106	0/1:96:57,39:57:2031:39:1357:-93.1679,0,-154.021	0/1:110:46,64:46:1623:64:2250:-169.259,0,-113.238	0/0:111:111,0:111:3950:0:0:0,-33.4143,-354.756	0/1:123:64,59:64:2275:59:1939:-137.714,0,-167.976	0/1:93:46,47:46:1648:47:1656:-121.229,0,-120.605	0/1:82:50,32:50:1792:32:1104:-74.929,0,-136.831	0/0:81:81,0:81:2881:0:0:0,-24.3834,-259.474	0/0:91:91,0:91:3237:0:0:0,-27.3937,-291.541	0/1:42:22,20:22:788:20:703:-50.7846,0,-58.5933	0/0:42:42,0:42:1499:0:0:0,-12.6433,-135.196	0/1:56:25,31:25:887:31:1070:-79.6491,0,-63.2904	0/1:234:123,111:123:4389:111:3899:-280.202,0,-324.578	0/1:133:67,66:67:2404:66:2290:-166.219,0,-176.57	0/1:106:36,70:36:1296:70:2465:-190.081,0,-85.0338	0/1:106:64,42:64:2284:42:1483:-101.14,0,-173.866	0/1:40:27,13:27:963:13:435:-27.1912,0,-74.9447	0/0:149:148,1:148:5284:1:36:0,-41.2562,-471.945	0/1:366:177,189:177:6313:189:6613:-484.322,0,-457.223	0/0:185:185,0:185:6643:0:0:0,-55.6905,-597.9	0/0:28:28,0:28:995:0:0:0,-8.42884,-89.864	0/0:324:323,1:323:11521:1:36:0,-93.9364,-1033.1	0/1:150:67,83:67:2389:83:2908:-216.628,0,-168.766	0/0:87:87,0:87:3105:0:0:0,-26.1896,-279.664	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.4	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:54:54,0:54:1927:0:0:0,-16.2556,-173.691	0/1:215:109,106:109:3856:106:3637:-262.525,0,-282.509	0/0:89:89,0:89:3196:0:0:0,-26.7917,-287.844	0/0:65:65,0:65:2328:0:0:0,-19.5669,-209.661	0/1:9:3,6:3:108:6:208:-16.3423,0,-7.3659	0/1:147:84,63:84:3012:63:2159:-150.171,0,-225.751	0/0:45:45,0:45:1616:0:0:0,-13.5463,-145.716	0/0:139:139,0:139:4960:0:0:0,-41.8432,-446.294	0/0:63:63,0:63:2246:0:0:0,-18.9649,-202.398	0/1:77:38,39:38:1364:39:1383:-101.421,0,-99.874	0/1:118:54,64:54:1917:64:2216:-163.899,0,-137.254	0/1:118:62,55:62:2223:55:1880:-133.795,0,-164.738	0/0:129:129,0:129:4569:0:0:0,-38.8329,-411.369	0/1:80:44,36:44:1572:36:1276:-90.9035,0,-117.059	0/1:132:73,59:73:2612:59:2075:-147.148,0,-195.426	0/1:159:85,74:85:3056:74:2574:-183.91,0,-226.835	0/1:16:9,7:9:324:7:240:-17.1058,0,-24.4144	0/1:93:51,42:51:1807:42:1479:-105.375,0,-134.887	0/1:99:45,54:45:1612:54:1894:-140.888,0,-115.565	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.653	0/1:150:65,84:65:2316:84:2931:-218.629,0,-163.424	0/0:35:35,0:35:1229:0:0:0,-10.536,-110.905	0/1:26:18,8:18:644:8:280:-17.7063,0,-50.462	0/1:20:11,9:11:392:9:316:-22.7533,0,-29.5995	0/0:99:99,0:99:3543:0:0:0,-29.802,-319.066	0/1:109:54,55:54:1925:55:1899:-138.214,0,-140.703	0/1:17:10,7:10:360:7:244:-17.1682,0,-27.6268	0/0:217:216,1:216:7712:1:32:0,-62.1246,-690.746	0/1:155:75,79:75:2677:79:2784:-203.778,0,-194.512	0/1:71:36,35:36:1269:35:1203:-87.1524,0,-93.1284	0/0:78:78,0:78:2791:0:0:0,-23.4803,-251.332	0/1:174:72,102:72:2576:102:3561:-267.628,0,-179.698	0/1:257:92,165:92:3287:165:5767:-441.179,0,-218.68	0/1:68:32,36:32:1148:36:1262:-93.2281,0,-83.1598	0/0:76:76,0:76:2707:0:0:0,-22.8783,-243.656	0/1:44:29,15:29:1025:15:513:-33.235,0,-79.3121	0/1:23:6,17:6:216:17:600:-47.3698,0,-12.8668	0/1:143:75,68:75:2679:68:2352:-168.714,0,-198.261	0/1:97:40,57:40:1440:57:1991:-150.155,0,-100.649	0/1:148:73,75:73:2589:75:2643:-193.335,0,-188.691	0/0:203:203,0:203:7238:0:0:0,-61.1091,-650.833	0/0:230:230,0:230:8153:0:0:0,-69.2369,-733.381	0/0:98:98,0:98:3511:0:0:0,-29.5009,-316.191	0/1:23:7,16:7:248:16:559:-43.703,0,-15.7322	0/1:22:10,12:10:360:12:419:-31.4037,0,-26.117	0/0:126:126,0:126:4528:0:0:0,-37.9298,-407.628	0/0:253:252,1:252:9003:1:36:0,-72.5649,-805.807	0/1:57:28,29:28:977:29:1001:-73.0941,0,-71.0793	0/1:89:40,49:40:1421:49:1676:-124.21,0,-101.391	0/1:62:25,37:25:872:37:1289:-97.5704,0,-60.1298	0/0:124:124,0:124:4390:0:0:0,-37.3277,-395.178	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8303	0/1:90:41,49:41:1464:49:1675:-123.174,0,-104.286	0/1:91:44,47:44:1580:47:1618:-118.449,0,-115.081	0/0:73:73,0:73:2599:0:0:0,-21.9752,-234.137	0/1:142:69,73:69:2463:73:2527:-184.728,0,-179.165	0/1:77:27,50:27:968:50:1730:-132.51,0,-63.8869	0/0:130:130,0:130:4638:0:0:0,-39.1339,-417.208	0/0:116:116,0:116:4130:0:0:0,-34.9195,-371.748
chr11	2521158	.	GGG	AGA,AGG	206330	PASS	AB=0.495509,0.502495;ABP=4.06353,3.33537;AC=132,56;AF=0.702128,0.297872;AN=188;AO=6857,3027;CIGAR=1X1M1X,1X2M;DP=9909;DPB=9911;DPRA=0,1.39425;EPP=14892.8,6567.37;EPPR=9.52472;GTI=0;LEN=3,1;MEANALT=1.87234,2.22951;MQM=59.5365,56.6293;MQMR=60;NS=94;NUMALT=2;ODDS=4.78718;PAIRED=0,0;PAIREDR=0;PAO=1.5,1.5;PQA=54,54;PQR=0;PRO=3;QA=241501,108187;QR=108;RO=3;RPL=6857,3026;RPP=14892.8,6567.37;RPPR=9.52472;RPR=0,1;RUN=1,1;SAF=0,0;SAP=14892.8,6576.06;SAR=6857,3027;SRF=0;SRP=9.52472;SRR=3;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:32:0,20,12:0:0:20,12:716,432:-93.9528,-35.6002,-29.5796,-58.7116,0,-55.0992	1/2:84:0,39,45:0:0:39,45:1352,1616:-241.864,-132.006,-120.266,-110.21,0,-96.6636	1/2:102:0,44,58:0:0:44,58:1543,2063:-293.68,-168.13,-154.885,-125.902,0,-108.443	1/2:229:0,152,76:0:0:152,76:5292,2703:-649.878,-219.665,-173.908,-430.206,0,-407.328	1/1:74:0,73,0:0:0:73,0:2594,0:-233.341,-21.9752,0,-233.341,-21.9752,-233.341	1/1:45:0,45,0:0:0:45,0:1599,0:-144.133,-13.5464,0,-144.133,-13.5464,-144.133	1/2:108:0,53,54:0:0:53,54:1879,1923:-309.492,-156.42,-140.466,-153.145,0,-136.889	1/2:155:0,85,70:0:0:85,70:2906,2507:-440.258,-204.454,-178.867,-236.154,0,-215.082	1/2:97:0,58,39:0:0:58,39:2058,1399:-281.684,-114.096,-96.6364,-167.944,0,-156.204	1/2:112:0,49,63:0:0:49,63:1657,2252:-317.885,-183.581,-168.831,-134.65,0,-115.685	1/1:114:0,114,0:0:0:114,0:3954,0:-355.629,-34.3174,0,-355.629,-34.3174,-355.629	1/2:128:0,65,62:0:0:65,62:2273,2211:-365.011,-180.11,-160.543,-184.894,0,-166.23	1/2:99:0,47,52:0:0:47,52:1682,1856:-288.71,-151.557,-137.408,-137.51,0,-121.856	1/2:81:0,51,30:0:0:51,30:1811,1071:-235.143,-87.6264,-72.2738,-147.872,0,-138.842	1/1:84:0,83,0:0:0:83,0:2922,0:-262.957,-24.9855,0,-262.957,-24.9855,-262.957	1/1:91:0,91,0:0:0:91,0:3213,0:-289.384,-27.3937,0,-289.384,-27.3937,-289.384	1/2:44:0,22,22:0:0:22,22:770,788:-127.019,-64.3842,-57.7615,-62.988,0,-56.3653	1/1:42:0,42,0:0:0:42,0:1507,0:-135.917,-12.6433,0,-135.917,-12.6433,-135.917	1/2:55:0,25,30:0:0:25,30:891,1067:-159.847,-87.2192,-79.6935,-72.9839,0,-63.953	1/2:233:0,124,109:0:0:124,109:4419,3892:-677.051,-317.174,-279.847,-360.233,0,-327.421	1/2:139:0,71,67:0:0:71,67:2502,2377:-397.287,-193.588,-172.215,-203.771,0,-183.602	1/2:106:0,37,69:0:0:37,69:1316,2459:-307.88,-200.632,-189.494,-107.604,0,-86.8327	1/2:112:0,68,43:0:0:68,43:2388,1519:-317.907,-123.558,-103.088,-194.448,0,-181.504	1/2:42:0,27,15:0:0:27,15:972,536:-123.078,-43.7646,-35.6368,-79.6701,0,-75.1546	1/1:153:0,150,1:0:0:150,1:5220,36:-469.653,-45.1545,0,-466.717,-42.183,-466.416	1/2:365:0,175,189:0:0:175,189:6094,6763:-1046.24,-550.71,-498.03,-495.543,0,-438.648	1/1:189:0,188,0:0:0:188,0:6689,0:-601.851,-56.5936,0,-601.851,-56.5936,-601.851	1/1:30:0,30,0:0:0:30,0:1052,0:-94.9868,-9.0309,0,-94.9868,-9.0309,-94.9868	1/1:336:0,334,1:0:0:334,1:11796,36:-1061.1,-100.544,0,-1058.16,-97.5826,-1057.86	1/2:159:0,73,86:0:0:73,86:2543,3070:-456.13,-250.392,-228.417,-206.088,0,-180.2	1/1:90:0,90,0:0:0:90,0:3195,0:-287.678,-27.0927,0,-287.678,-27.0927,-287.678	1/1:11:0,11,0:0:0:11,0:393,0:-35.7108,-3.31133,0,-35.7108,-3.31133,-35.7108	1/1:42:0,42,0:0:0:42,0:1484,0:-133.72,-12.6433,0,-133.72,-12.6433,-133.72	1/1:5:0,5,0:0:0:5,0:172,0:-15.8174,-1.50515,0,-15.8174,-1.50515,-15.8174	1/1:19:0,19,0:0:0:19,0:684,0:-61.8903,-5.71957,0,-61.8903,-5.71957,-61.8903	1/1:54:0,54,0:0:0:54,0:1896,0:-170.905,-16.2556,0,-170.905,-16.2556,-170.905	1/2:230:0,114,116:0:0:114,116:4024,4146:-665.635,-337.962,-303.644,-328.028,0,-293.109	1/1:95:0,95,0:0:0:95,0:3329,0:-299.808,-28.5979,0,-299.808,-28.5979,-299.808	1/1:68:0,68,0:0:0:68,0:2404,0:-216.561,-20.47,0,-216.561,-20.47,-216.561	1/2:9:0,3,6:0:0:3,6:106,207:-25.7883,-17.1527,-16.2496,-8.98601,0,-7.17983	1/2:156:0,85,71:0:0:85,71:2986,2544:-449.352,-207.491,-181.903,-242.216,0,-220.843	1/1:45:0,45,0:0:0:45,0:1613,0:-145.447,-13.5464,0,-145.447,-13.5464,-145.447	1/1:147:0,145,1:0:0:145,1:5124,36:-460.791,-43.6494,0,-457.854,-40.637,-457.553	1/1:67:0,67,0:0:0:67,0:2368,0:-213.373,-20.169,0,-213.373,-20.169,-213.373	1/2:78:0,39,39:0:0:39,39:1383,1404:-227.41,-114.745,-103.004,-113.022,0,-101.282	1/2:123:0,58,65:0:0:58,65:2047,2321:-355.945,-189.299,-171.839,-167,0,-147.433	1/2:121:0,67,54:0:0:67,54:2341,1927:-347.638,-157.27,-137.101,-190.721,0,-174.465	1/1:136:0,136,0:0:0:136,0:4798,0:-431.785,-40.9401,0,-431.785,-40.9401,-431.785	1/2:81:0,46,35:0:0:46,35:1611,1260:-233.59,-103.008,-89.1607,-130.936,0,-120.4	1/2:132:0,74,58:0:0:74,58:2589,2084:-380.718,-170.228,-147.952,-210.844,0,-193.384	1/2:161:0,85,76:0:0:85,76:3007,2719:-466.143,-221.937,-196.35,-244.561,0,-221.683	1/2:17:0,10,7:0:0:10,7:350,248:-48.7429,-20.5418,-17.5315,-28.5521,0,-26.4449	1/2:94:0,52,42:0:0:52,42:1828,1512:-272.481,-123.695,-108.042,-149.142,0,-136.498	1/2:99:0,45,53:0:0:45,53:1557,1900:-281.428,-154.913,-141.366,-126.507,0,-110.553	1/1:16:0,16,0:0:0:16,0:566,0:-51.2255,-4.81648,0,-51.2255,-4.81648,-51.2255	1/2:153:1,69,83:1:36:69,83:2418,2980:-436.314,-239.969,-222.135,-193.7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chr11	2521171	.	T	C	136841	PASS	AB=0.487167;ABP=11.5934;AC=132;AF=0.702128;AN=188;AO=6735;CIGAR=1X;DP=9817;DPB=9817;DPRA=0;EPP=14627.9;EPPR=6691.15;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.5611;MQMR=56.5714;NS=94;NUMALT=1;ODDS=2.86824;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240583;QR=110517;RO=3080;RPL=6735;RPP=14627.9;RPPR=6691.15;RPR=0;RUN=1;SAF=0;SAP=14627.9;SAR=6735;SRF=0;SRP=6691.15;SRR=3080;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:33:13,20:13:468:20:716:-54.8029,0,-32.5166	0/1:84:45,39:45:1620:39:1392:-100.262,0,-120.625	0/1:103:59,44:59:2120:44:1580:-111.469,0,-159.422	0/1:226:77,149:77:2768:149:5305:-409.478,0,-180.289	1/1:73:0,73:0:0:73:2620:-236.033,-21.9752,0	1/1:45:0,45:0:0:45:1612:-145.262,-13.5464,0	0/1:108:54,54:54:1940:54:1929:-141.366,0,-141.685	0/1:155:72,83:72:2576:83:2964:-220.265,0,-185.028	0/1:97:39,58:39:1404:58:2076:-157.579,0,-97.0385	0/1:113:66,47:66:2372:47:1665:-116.106,0,-179.316	1/1:113:0,113:0:0:113:4013:-360.427,-34.0164,0	0/1:127:62,65:62:2224:65:2310:-169.919,0,-162.112	0/1:99:51,48:51:1828:48:1728:-125.995,0,-134.89	0/1:83:32,51:32:1152:51:1824:-139.409,0,-78.8876	1/1:81:0,81:0:0:81:2900:-261.183,-24.3834,0	1/1:89:0,89:0:0:89:3175:-285.965,-26.7917,0	0/1:44:22,22:22:784:22:784:-57.6304,0,-57.4012	1/1:42:0,42:0:0:42:1512:-136.366,-12.6433,0	0/1:57:32,25:32:1144:25:892:-63.441,0,-85.9904	0/1:235:112,123:112:4024:123:4389:-324.118,0,-291.077	0/1:140:68,72:68:2448:72:2554:-187.954,0,-178.216	0/1:108:71,37:71:2552:37:1332:-87.6702,0,-197.254	0/1:110:44,66:44:1584:66:2340:-177.697,0,-109.011	0/1:42:15,27:15:540:27:968:-74.7941,0,-35.9976	1/1:149:1,148:1:36:148:5261:-469.634,-41.2562,0	0/1:361:191,170:191:6856:170:6060:-436.782,0,-507.552	1/1:187:0,186:0:0:186:6668:-599.799,-55.9916,0	1/1:30:0,30:0:0:30:1058:-95.5285,-9.0309,0	1/1:327:1,326:1:36:326:11667:-1046.19,-94.8395,0	0/1:157:85,72:85:3048:72:2559:-182.905,0,-226.728	1/1:89:0,89:0:0:89:3182:-286.555,-26.7917,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	1/1:40:0,40:0:0:40:1440:-129.893,-12.0412,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:50:0,50:0:0:50:1787:-161.111,-15.0515,0	0/1:227:117,110:117:4180:110:3904:-283.216,0,-307.679	1/1:91:0,91:0:0:91:3256:-293.242,-27.3937,0	1/1:64:0,64:0:0:64:2281:-205.519,-19.2659,0	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0718	0/1:154:71,83:71:2548:83:2948:-217.9,0,-182.902	1/1:45:0,45:0:0:45:1603:-144.549,-13.5464,0	1/1:143:0,143:0:0:143:5120:-460.666,-43.0473,0	1/1:66:0,66:0:0:66:2319:-208.961,-19.868,0	0/1:78:39,39:39:1404:39:1387:-101.642,0,-103.004	0/1:123:67,56:67:2404:56:2004:-143.576,0,-179.143	0/1:123:56,67:56:2001:67:2404:-179.483,0,-143.066	1/1:132:0,132:0:0:132:4726:-425.002,-39.736,0	0/1:83:37,46:37:1332:46:1622:-121.231,0,-95.0309	0/1:130:59,71:59:2124:71:2531:-188.833,0,-152.149	0/1:158:78,80:78:2785:80:2868:-210.782,0,-203.137	0/1:16:7,9:7:252:9:324:-24.4144,0,-18.1959	0/1:93:42,51:42:1512:51:1832:-137.137,0,-108.343	0/1:100:56,44:56:2016:44:1565:-111.035,0,-151.555	1/1:16:0,16:0:0:16:576:-52.1299,-4.81648,0	0/1:157:89,68:89:3204:68:2428:-171.339,0,-241.065	1/1:37:0,37:0:0:37:1324:-119.455,-11.1381,0	0/1:26:7,19:7:248:19:684:-54.0608,0,-14.8315	0/1:20:9,11:9:324:11:396:-29.9621,0,-23.4798	1/1:103:0,103:0:0:103:3684:-331.74,-31.0061,0	0/1:108:58,50:58:2088:50:1800:-129.762,0,-155.427	0/1:17:7,10:7:252:10:360:-27.6268,0,-17.8948	1/1:221:0,221:0:0:221:7918:-712.511,-66.5276,0	0/1:161:86,75:86:3073:75:2692:-193.942,0,-227.353	0/1:74:37,37:37:1328:37:1317:-96.5453,0,-97.3935	1/1:79:0,79:0:0:79:2809:-253.039,-23.7814,0	0/1:183:108,75:108:3868:75:2684:-186.704,0,-291.768	0/1:263:171,92:171:6114:92:3296:-217.683,0,-470.441	0/1:66:35,31:35:1260:31:1116:-80.8837,0,-93.6498	1/1:78:0,78:0:0:78:2792:-251.21,-23.4803,0	0/1:46:15,31:15:540:31:1107:-86.0895,0,-35.0205	0/1:25:19,6:19:684:6:212:-11.899,0,-54.3199	0/1:145:72,73:72:2588:73:2608:-191.286,0,-188.722	0/1:99:59,40:59:2124:40:1424:-98.6117,0,-161.514	0/1:156:80,76:80:2868:76:2703:-196.11,0,-211.082	1/1:207:0,207:0:0:207:7390:-664.997,-62.3132,0	1/1:236:0,236:0:0:236:8410:-756.305,-71.0431,0	1/1:98:0,98:0:0:98:3520:-316.997,-29.5009,0	0/1:23:16,7:16:568:7:248:-15.7322,0,-44.517	0/1:24:14,10:14:504:10:360:-25.5149,0,-38.4517	1/1:135:0,135:0:0:135:4821:-433.981,-40.6391,0	1/1:250:1,249:1:36:249:8928:-799.062,-71.6618,0	0/1:58:28,30:28:1004:30:1072:-79.3095,0,-72.9873	0/1:91:51,40:51:1832:40:1440:-102.502,0,-137.568	0/1:64:38,26:38:1368:26:928:-64.5723,0,-104.066	1/1:123:0,123:0:0:123:4393:-395.535,-37.0267,0	1/1:23:0,23:0:0:23:828:-74.8303,-6.92369,0	0/1:95:52,43:52:1856:43:1530:-108.735,0,-137.919	0/1:96:49,47:49:1760:47:1662:-120.942,0,-129.675	1/1:73:0,73:0:0:73:2620:-236.025,-21.9752,0	0/1:150:81,69:81:2896:69:2476:-177.926,0,-214.489	0/1:77:51,26:51:1832:26:927:-60.1969,0,-141.638	1/1:132:0,132:0:0:132:4707:-423.134,-39.736,0	1/1:115:0,114:0:0:114:4069:-365.846,-34.3174,0
chr11	2581909	.	T	C	139902	PASS	AB=0.342804;ABP=1037.97;AC=138;AF=0.734043;AN=188;AO=6839;CIGAR=1X;DP=10050;DPB=10050;DPRA=0;EPP=14853.7;EPPR=6969.09;GTI=2;LEN=1;MEANALT=1.03191;MQM=59.7311;MQMR=59.5748;NS=94;NUMALT=1;ODDS=1.76869;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=241605;QR=113573;RO=3208;RPL=8;RPP=14784.3;RPPR=6848.02;RPR=6831;RUN=1;SAF=8;SAP=14784.3;SAR=6831;SRF=14;SRP=6848.02;SRR=3194;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:67:44,23:44:1560:23:811:-53.0845,0,-120.507	0/1:45:36,9:36:1267:9:311:-14.7774,0,-100.76	0/1:108:47,61:47:1680:61:2153:-161.525,0,-118.697	0/1:195:129,66:129:4564:66:2348:-152.879,0,-352.206	1/1:31:1,30:1:36:30:1076:-93.4019,-5.73876,0	1/1:26:0,26:0:0:26:932:-84.179,-7.82678,0	0/1:73:47,26:47:1662:26:936:-62.5666,0,-127.885	0/1:77:64,13:64:2231:13:451:-17.7383,0,-177.103	0/1:121:69,52:69:2449:52:1847:-130.077,0,-184.217	0/1:49:39,10:39:1373:10:352:-17.2677,0,-108.973	1/1:99:0,99:0:0:99:3495:-314.756,-29.802,0	0/1:84:62,21:62:2194:21:741:-41.6666,0,-171.002	0/1:61:50,11:50:1766:11:387:-16.6724,0,-140.841	0/1:48:34,14:34:1203:14:487:-29.7098,0,-94.1149	1/1:23:0,23:0:0:23:805:-72.766,-6.92369,0	1/1:32:0,32:0:0:32:1140:-102.909,-9.63296,0	0/1:30:23,7:23:815:7:235:-12.4471,0,-64.6399	1/1:13:0,13:0:0:13:456:-41.3732,-3.91339,0	0/1:56:32,24:32:1115:24:846:-59.5971,0,-83.7966	0/1:140:91,49:91:3211:49:1724:-113.296,0,-246.973	0/1:151:113,38:113:3981:38:1332:-74.7156,0,-312.987	0/1:141:124,17:124:4423:17:608:-12.6068,0,-355.778	0/1:109:60,49:60:2101:49:1738:-123.868,0,-156.475	0/1:31:24,7:24:860:7:248:-13.3304,0,-68.3899	1/1:122:0,121:0:0:121:4261:-383.274,-36.4246,0	0/1:213:100,113:100:3538:113:4023:-298.138,0,-254.498	1/1:215:1,214:1:36:214:7594:-679.781,-61.1232,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:192:0,192:0:0:192:6778:-610.095,-57.7978,0	0/1:75:54,21:54:1915:21:740:-44.3461,0,-150.046	1/1:45:0,45:0:0:45:1600:-144.289,-13.5464,0	1/1:64:0,64:0:0:64:2255:-203.21,-19.2659,0	1/1:437:1,436:1:36:436:15447:-1385.66,-127.952,0	1/1:317:1,316:1:32:316:11107:-995.168,-92.2272,0	1/1:582:1,581:1:36:581:20515:-1841.96,-171.601,0	1/1:632:2,630:2:72:630:22293:-1998.33,-183.414,0	0/1:186:102,84:102:3618:84:2950:-209.743,0,-269.721	1/1:47:0,47:0:0:47:1653:-149.056,-14.1484,0	1/1:118:0,118:0:0:118:4177:-376.095,-35.5215,0	1/1:52:4,48:4:140:48:1697:-140.053,-2.70898,0	0/1:89:50,39:50:1780:39:1396:-99.1474,0,-133.648	1/1:33:0,33:0:0:33:1147:-103.531,-9.93399,0	1/1:82:0,82:0:0:82:2910:-262.044,-24.6845,0	1/1:33:0,33:0:0:33:1152:-103.977,-9.93399,0	0/1:36:20,16:20:712:16:568:-40.6146,0,-53.5687	0/1:205:161,44:161:5727:44:1555:-78.5109,0,-453.828	0/1:70:51,19:51:1791:19:659:-38.5602,0,-140.378	1/1:103:0,103:0:0:103:3638:-327.621,-31.0061,0	0/1:130:75,55:75:2680:55:1929:-134.746,0,-202.31	0/1:58:38,20:38:1329:20:708:-46.5859,0,-102.442	0/1:101:74,27:74:2589:27:960:-56.3122,0,-202.85	1/1:68:3,65:3:104:65:2284:-196.125,-10.7746,0	0/1:99:56,43:56:1996:43:1512:-106.518,0,-150.081	0/1:96:57,39:57:1993:39:1390:-96.4945,0,-150.714	1/1:207:0,207:0:0:207:7217:-649.519,-62.3132,0	0/1:134:81,53:81:2884:53:1883:-129.347,0,-219.356	1/1:23:0,23:0:0:23:818:-73.9415,-6.92369,0	1/1:92:1,91:1:36:91:3200:-284.627,-24.0965,0	1/1:339:2,337:2:72:337:11957:-1069.09,-95.2124,0	1/1:54:1,53:1:36:53:1885:-165.701,-12.6573,0	0/1:74:62,12:62:2216:12:419:-15.7661,0,-177.411	1/1:66:3,63:3:100:63:2200:-188.929,-10.5375,0	1/1:52:1,51:1:36:51:1819:-160.392,-12.0553,0	0/1:120:79,41:79:2815:41:1452:-94.8504,0,-217.463	0/1:58:41,17:41:1432:17:599:-36.7784,0,-111.193	1/1:54:0,54:0:0:54:1910:-172.176,-16.2556,0	0/1:133:87,46:87:3084:46:1627:-106.681,0,-237.744	0/1:120:90,30:90:3220:30:1076:-61.0116,0,-253.876	0/1:117:35,81:35:1217:81:2840:-220.554,0,-74.5414	1/1:20:0,20:0:0:20:708:-64.0269,-6.0206,0	0/1:38:33,5:33:1167:5:180:-5.11293,0,-93.8926	1/1:127:6,121:6:208:121:4323:-370.188,-19.179,0	0/1:174:140,34:140:4913:34:1224:-58.0006,0,-389.829	0/1:103:69,34:69:2437:34:1211:-78.2785,0,-188.56	0/1:179:130,49:130:4629:49:1710:-100.3,0,-362.823	1/1:112:0,112:0:0:112:3940:-354.722,-33.7154,0	1/1:102:0,102:0:0:102:3623:-326.241,-30.7051,0	0/1:55:45,10:45:1604:10:360:-16.1877,0,-128.013	1/1:185:8,177:8:284:177:6235:-535.155,-29.805,0	0/1:51:44,7:44:1580:7:248:-7.31166,0,-127.128	1/1:26:0,26:0:0:26:927:-83.7367,-7.82678,0	1/1:183:2,181:2:68:181:6449:-573.984,-48.6308,0	0/1:47:27,20:27:951:20:693:-48.5419,0,-71.7488	0/1:54:39,15:39:1392:15:536:-32.3015,0,-107.593	0/1:38:25,13:25:900:13:468:-31.0205,0,-69.8757	1/1:32:0,32:0:0:32:1097:-99.0336,-9.63296,0	1/1:17:0,17:0:0:17:589:-53.3309,-5.11751,0	0/1:73:55,18:55:1967:18:640:-35.949,0,-155.329	0/1:53:41,12:41:1460:12:424:-22.3128,0,-115.741	1/1:107:0,107:0:0:107:3739:-336.476,-32.2102,0	0/1:184:60,124:60:2127:124:4333:-334.75,0,-136.298	0/1:73:58,15:58:2015:15:536:-26.5637,0,-159.323	1/1:5:0,5:0:0:5:171:-15.7255,-1.50515,0	1/1:51:3,48:3:108:48:1694:-142.561,-5.27736,0
chr11	2581960	.	T	C	59972.5	PASS	AB=0.660499;ABP=1115.48;AC=50;AF=0.265957;AN=188;AO=3320;CIGAR=1X;DP=10326;DPB=10326;DPRA=1.13952;EPP=7212.3;EPPR=15212;GTI=2;LEN=1;MEANALT=1.03226;MQM=59.5214;MQMR=59.7149;NS=94;NUMALT=1;ODDS=1.45091;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=118549;QR=248424;RO=7004;RPL=3320;RPP=7212.3;RPPR=15212;RPR=0;RUN=1;SAF=0;SAP=7212.3;SAR=3320;SRF=0;SRP=15212;SRR=7004;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:24,44:24:860:44:1561:-120.181,0,-57.2509	0/1:48:10,38:10:356:38:1356:-107.862,0,-17.9318	0/1:110:60,50:60:2107:50:1758:-125.133,0,-156.781	0/1:204:71,133:71:2537:133:4741:-365.411,0,-167.169	0/0:32:31,1:31:1067:1:36:0,-6.03979,-92.5804	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.179	0/1:79:26,53:26:936:53:1892:-146.753,0,-60.7781	0/1:81:16,65:16:557:65:2320:-184.146,0,-26.069	0/1:122:53,69:53:1874:69:2453:-184.28,0,-132.202	0/1:48:10,38:10:360:38:1353:-107.427,0,-18.2949	0/0:99:99,0:99:3537:0:0:0,-29.802,-318.534	0/1:85:24,61:24:856:61:2150:-168.03,0,-51.7368	0/1:63:11,52:11:392:52:1860:-148.697,0,-16.5245	0/1:49:12,37:12:432:37:1315:-103.89,0,-24.4707	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.958	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:30:7,23:7:252:23:824:-65.4524,0,-13.9981	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6874	0/1:60:25,35:25:866:35:1256:-95.2375,0,-60.1847	0/1:144:50,94:50:1784:94:3384:-261.376,0,-117.492	0/1:162:42,120:42:1463:120:4274:-336.033,0,-83.1851	0/1:144:17,127:17:612:127:4537:-365.119,0,-12.0651	0/1:111:49,62:49:1722:62:2213:-166,0,-121.846	0/1:28:8,20:8:288:20:720:-56.6999,0,-17.8386	0/0:125:125,0:125:4424:0:0:0,-37.6287,-398.156	0/1:221:115,106:115:4052:106:3781:-273.947,0,-298.335	0/0:219:219,0:219:7680:0:0:0,-65.9256,-691.189	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:199:199,0:199:7095:0:0:0,-59.905,-638.587	0/1:79:22,57:22:788:57:2033:-159.35,0,-47.4634	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.486	0/0:68:68,0:68:2402:0:0:0,-20.47,-216.43	0/0:445:443,1:443:15709:1:36:0,-130.344,-1408.42	0/0:322:322,0:322:11435:0:0:0,-96.9317,-1027.48	0/0:603:602,1:602:21079:1:36:0,-177.923,-1892.05	0/0:643:643,0:643:22941:0:0:0,-193.562,-2063.52	0/1:186:85,101:85:3037:101:3632:-270.973,0,-217.566	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.721	0/0:126:126,0:126:4494:0:0:0,-37.9298,-404.587	0/0:54:50,4:50:1713:4:144:0,-2.942,-140.803	0/1:91:39,52:39:1377:52:1860:-139.804,0,-96.8329	0/0:34:34,0:34:1224:0:0:0,-10.235,-110.462	0/0:84:84,0:84:2978:0:0:0,-25.2865,-268.149	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.222	0/1:35:16,19:16:557:19:676:-50.6319,0,-39.9191	0/1:209:43,166:43:1536:166:5938:-471.597,0,-75.6031	0/1:74:19,55:19:665:55:1968:-155.098,0,-37.8966	0/0:103:103,0:103:3609:0:0:0,-31.0061,-325.001	0/1:138:56,81:56:1978:81:2889:-218.644,0,-136.69	0/1:62:21,41:21:752:41:1463:-113.295,0,-49.3424	0/1:101:28,73:28:1008:73:2620:-205.641,0,-60.6323	0/0:68:65,3:65:2321:3:108:0,-10.4131,-199.091	0/1:102:43,59:43:1544:59:2120:-160.322,0,-108.437	0/1:98:41,57:41:1472:57:2024:-152.929,0,-103.257	0/0:215:215,0:215:7645:0:0:0,-64.7214,-687.98	0/1:145:53,92:53:1855:92:3293:-252.835,0,-123.512	0/0:24:24,0:24:849:0:0:0,-7.22472,-76.4079	0/0:93:92,1:92:3281:1:36:0,-24.3975,-291.897	0/0:354:351,3:351:12452:3:108:0,-96.5126,-1110.34	0/0:51:51,0:51:1798:0:0:0,-15.3525,-161.907	0/1:73:11,62:11:396:62:2202:-176.445,0,-14.0072	0/0:66:63,3:63:2245:3:104:0,-10.1652,-192.573	0/0:51:50,1:50:1777:1:36:0,-11.7543,-156.612	0/1:127:44,83:44:1561:83:2957:-228.125,0,-102.549	0/1:60:17,43:17:612:43:1536:-120.001,0,-37.3516	0/0:59:59,0:59:2108:0:0:0,-17.7608,-189.975	0/1:132:46,86:46:1618:86:3073:-237.054,0,-106.168	0/1:122:29,93:29:1029:93:3336:-263.691,0,-56.1955	0/1:118:82,36:82:2943:36:1296:-81.4117,0,-229.573	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3485	0/1:40:5,35:5:176:35:1252:-100.939,0,-4.14382	0/0:129:123,6:123:4363:6:216:0,-19.0602,-372.839	0/1:179:35,144:35:1241:144:5137:-407.601,0,-58.1042	0/1:110:36,74:36:1262:74:2656:-206.132,0,-80.7542	0/1:183:49,134:49:1726:134:4756:-373.013,0,-100.532	0/0:112:112,0:112:3964:0:0:0,-33.7154,-356.877	0/0:106:106,0:106:3793:0:0:0,-31.9092,-341.461	0/1:61:10,51:10:360:51:1809:-144.479,0,-14.3815	0/0:188:179,9:179:6302:9:324:0,-27.1622,-537.545	0/1:55:9,46:9:324:46:1640:-131.321,0,-12.9492	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.3104	0/0:187:187,0:187:6615:0:0:0,-56.2926,-595.364	0/1:48:20,28:20:716:28:993:-75.226,0,-50.3167	0/1:56:13,43:13:468:43:1548:-121.008,0,-25.602	0/1:38:13,25:13:464:25:870:-67.1667,0,-30.6584	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4111	0/1:74:18,56:18:648:56:2012:-159.077,0,-36.3678	0/1:56:13,43:13:464:43:1544:-122.395,0,-25.011	0/0:110:110,0:110:3926:0:0:0,-33.1133,-353.41	0/1:187:125,62:125:4457:62:2224:-144.121,0,-344.996	0/1:76:16,60:16:572:60:2156:-171.106,0,-28.8992	0/0:5:5,0:5:165:0:0:0,-1.50515,-15.1736	0/0:52:49,3:49:1749:3:104:0,-5.95075,-147.881
chr11	2962261	.	CTCTAGTATTTATG	TTTTAGTATTCATG,TTTTAGTATTCATA	200579	PASS	AB=0.435069,0.559987;ABP=225.219,192.668;AC=135,53;AF=0.718085,0.281915;AN=188;AO=6306,3398;CIGAR=1X1M1X7M1X3M,1X1M1X7M1X2M1X;DP=9770;DPB=9772.21;DPRA=0,1.26799;EPP=13696.3,7381.67;EPPR=5.18177;GTI=3;LEN=14,14;MEANALT=2.2234,2.54717;MQM=57.9163,47.4614;MQMR=60;NS=94;NUMALT=2;ODDS=0.162631;PAIRED=0,0;PAIREDR=0;PAO=3,3;PQA=98.3333,98.3333;PQR=144;PRO=4;QA=224092,119724;QR=36;RO=1;RPL=6306,3398;RPP=13696.3,7381.67;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=0,0;SAP=13696.3,7381.67;SAR=6306,3398;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:24:0,12,12:0:0:12,12:430,427:-68.378,-33.3825,-29.7702,-35.3438,0,-31.7315	1/2:151:0,78,71:0:0:78,71:2774,2505:-418.67,-193.089,-169.609,-225.596,0,-204.223	1/2:153:0,64,89:0:0:64,89:2273,3153:-428.988,-244.359,-225.094,-184.976,0,-158.184	1/2:219:0,81,137:0:0:81,137:2865,4827:-624.668,-391.465,-367.082,-233.195,0,-191.954	1/1:67:0,67,0:0:0:67,0:2385,0:-214.865,-20.169,0,-214.865,-20.169,-214.865	1/1:60:0,60,0:0:0:60,0:2143,0:-192.576,-18.0618,0,-192.576,-18.0618,-192.576	1/2:145:0,70,75:0:0:70,75:2458,2636:-413.728,-213.706,-192.634,-200.372,0,-177.795	1/2:151:0,59,92:0:0:59,92:2105,3231:-420.723,-249.814,-232.053,-171.256,0,-143.561	1/2:43:0,17,26:0:0:17,26:602,921:-120.501,-71.5897,-66.4722,-49.2586,0,-41.4318	1/2:100:0,44,56:0:0:44,56:1563,1944:-285.046,-157.682,-144.437,-127.715,0,-110.857	1/1:76:0,76,0:0:0:76,0:2708,0:-243.937,-22.8783,0,-243.937,-22.8783,-243.937	1/2:73:0,38,34:0:0:38,34:1351,1176:-199.679,-89.9417,-78.5026,-109.785,0,-99.5502	1/2:67:0,28,39:0:0:28,39:1006,1357:-186.411,-104.601,-96.1721,-82.1562,0,-70.416	1/1:76:0,76,0:0:0:76,0:2725,0:-245.436,-22.8783,0,-245.436,-22.8783,-245.436	1/1:66:0,66,0:0:0:66,0:2362,0:-212.769,-19.868,0,-212.769,-19.868,-212.769	1/1:41:0,40,0:0:0:40,0:1430,0:-128.629,-12.0412,0,-128.629,-12.0412,-128.629	1/2:52:0,23,28:0:0:23,28:826,988:-142.922,-75.8274,-68.9037,-67.0663,0,-58.6374	1/1:68:0,67,0:0:0:67,0:2379,0:-213.433,-20.169,0,-213.433,-20.169,-213.433	1/2:48:0,22,25:0:0:22,25:779,865:-129.479,-66.3471,-59.7244,-63.1214,0,-55.5957	1/2:417:0,228,188:0:0:228,188:8145,6642:-1202.2,-538.39,-469.755,-663.814,0,-607.221	1/1:79:0,78,0:0:0:78,0:2723,0:-244.826,-23.4803,0,-244.826,-23.4803,-244.826	1/2:185:0,47,136:0:0:47,136:1665,4780:-523.531,-387.911,-373.763,-135.614,0,-94.6735	1/2:50:0,20,29:0:0:20,29:716,1019:-141.029,-82.6515,-76.6309,-58.3723,0,-49.6424	1/2:104:0,55,49:0:0:55,49:1957,1711:-297.266,-137.835,-121.278,-159.781,0,-145.031	1/1:75:0,75,0:0:0:75,0:2656,0:-239.114,-22.5773,0,-239.114,-22.5773,-239.114	1/2:371:0,145,223:0:0:145,223:5149,7855:-1056.68,-637.167,-593.517,-419.548,0,-352.418	1/1:202:0,198,0:0:0:198,0:7001,0:-629.737,-59.6039,0,-629.737,-59.6039,-629.737	1/1:43:0,43,0:0:0:43,0:1535,0:-138.275,-12.9443,0,-138.275,-12.9443,-138.275	1/1:251:0,250,0:0:0:250,0:8938,0:-803.981,-75.2575,0,-803.981,-75.2575,-803.981	1/2:123:0,55,67:0:0:55,67:1953,2380:-350.776,-191.69,-175.133,-159.187,0,-139.018	1/1:77:0,73,0:0:0:73,0:2597,0:-233.425,-21.9752,0,-233.425,-21.9752,-233.425	1/1:4:0,4,0:0:0:4,0:139,0:-12.8522,-1.20412,0,-12.8522,-1.20412,-12.8522	1/1:21:0,21,0:0:0:21,0:749,0:-67.712,-6.32163,0,-67.712,-6.32163,-67.712	1/1:5:0,5,0:0:0:5,0:175,0:-16.0659,-1.50515,0,-16.0659,-1.50515,-16.0659	1/1:14:0,14,0:0:0:14,0:490,0:-44.3462,-4.21442,0,-44.3462,-4.21442,-44.3462	1/1:7:0,7,0:0:0:7,0:247,0:-22.5154,-2.10721,0,-22.5154,-2.10721,-22.5154	1/2:209:0,99,108:0:0:99,108:3551,3825:-599.885,-310.314,-280.512,-289.614,0,-257.103	1/1:196:0,195,0:0:0:195,0:6910,0:-620.937,-58.7009,0,-620.937,-58.7009,-620.937	1/1:69:0,64,0:0:0:64,0:2256,0:-201.858,-19.2659,0,-201.858,-19.2659,-201.858	1/2:7:0,2,5:0:0:2,5:72,176:-20.481,-14.6034,-14.0013,-6.23466,0,-4.72951	1/2:185:0,88,97:0:0:88,97:3107,3447:-531.872,-278.922,-252.431,-253.303,0,-224.103	1/1:55:0,52,0:0:0:52,0:1860,0:-167.266,-15.6536,0,-167.266,-15.6536,-167.266	1/1:150:0,149,0:0:0:149,0:5326,0:-479.017,-44.8535,0,-479.017,-44.8535,-479.017	1/1:61:0,61,0:0:0:61,0:2171,0:-195.642,-18.3628,0,-195.642,-18.3628,-195.642	1/2:55:0,32,23:0:0:32,23:1134,820:-158.977,-66.8079,-57.175,-92.5228,0,-85.5991	1/2:71:1,28,42:1:36:28,42:1008,1489:-199.923,-117.974,-112.482,-79.3103,0,-69.6044	1/2:179:0,81,98:0:0:81,98:2875,3449:-498.56,-265.525,-241.142,-233.379,0,-203.878	1/1:182:0,182,0:0:0:182,0:6431,0:-578.755,-54.7875,0,-578.755,-54.7875,-578.755	1/2:196:0,77,119:0:0:77,119:2740,4181:-561.916,-338.911,-315.731,-223.359,0,-187.536	1/2:220:0,83,136:0:0:83,136:2919,4830:-629.139,-391.703,-366.718,-237.478,0,-196.538	1/1:154:0,153,0:0:0:153,0:5430,0:-488.454,-46.0576,0,-488.454,-46.0576,-488.454	1/2:23:0,11,12:0:0:11,12:396,426:-67.1109,-34.7957,-31.4844,-32.6714,0,-29.0591	1/2:182:0,75,107:0:0:75,107:2658,3787:-508.583,-292.797,-270.22,-216.132,0,-183.922	1/2:51:0,22,28:0:0:22,28:783,992:-144.537,-80.7309,-74.1082,-63.8484,0,-55.4196	1/1:19:0,19,0:0:0:19,0:674,0:-60.7902,-5.71957,0,-60.7902,-5.71957,-60.7902	1/2:145: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chr11	3178508	.	C	T	162874	PASS	AB=0.3682;ABP=1334.41;AC=135;AF=0.718085;AN=188;AO=7299;CIGAR=1X;DP=12889;DPB=12889;DPRA=0;EPP=15835.2;EPPR=12115.5;GTI=12;LEN=1;MEANALT=1.04255;MQM=58.2694;MQMR=48.4477;NS=94;NUMALT=1;ODDS=0.937967;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=260800;QR=197280;RO=5586;RPL=6383;RPP=8894.8;RPPR=25.0298;RPR=916;RUN=1;SAF=6385;SAP=8907.81;SAR=914;SRF=2912;SRP=25.0298;SRR=2674;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:117:61,55:61:2114:55:1976:-142.835,0,-145.683	0/1:139:88,51:88:3135:51:1820:-122.238,0,-213.55	0/1:270:176,94:176:6242:94:3333:-218.908,0,-459.833	0/1:299:206,93:206:7277:93:3321:-209.099,0,-539.066	1/1:91:6,85:6:203:85:3052:-256.308,-8.79255,0	1/1:31:0,31:0:0:31:1112:-100.391,-9.33193,0	0/1:189:121,68:121:4267:68:2436:-162.601,0,-313.051	0/1:271:183,88:183:6477:88:3136:-200.885,0,-465.224	0/1:196:128,68:128:4510:68:2433:-160.222,0,-325.053	0/1:125:72,53:72:2557:53:1900:-133.649,0,-184.007	1/1:59:0,59:0:0:59:2100:-188.775,-17.7608,0	0/1:143:90,53:90:3121:53:1892:-127.511,0,-223.072	0/1:125:80,45:80:2828:45:1595:-106.211,0,-200.11	1/1:36:0,36:0:0:36:1280:-115.503,-10.8371,0	1/1:70:0,70:0:0:70:2512:-226.332,-21.0721,0	1/1:46:0,46:0:0:46:1623:-146.358,-13.8474,0	0/1:58:52,6:52:1847:6:212:-1.96506,0,-134.615	1/1:30:0,30:0:0:30:1068:-96.4321,-9.0309,0	0/1:47:32,15:32:1131:15:540:-34.7881,0,-79.1556	0/1:251:165,86:165:5874:86:3078:-201.69,0,-433.182	1/1:157:0,157:0:0:157:5634:-507.178,-47.2617,0	0/1:241:158,83:158:5592:83:2968:-193.959,0,-416.726	0/1:228:146,82:146:5133:82:2919:-194.311,0,-384.288	0/1:178:95,83:95:3366:83:2958:-212.87,0,-231.734	1/1:178:0,177:0:0:177:6310:-567.632,-53.2823,0	0/1:539:270,268:270:9621:268:9584:-694.112,0,-675.413	1/1:208:0,208:0:0:208:7452:-670.724,-62.6142,0	1/1:32:0,32:0:0:32:1143:-103.179,-9.63296,0	1/1:396:0,396:0:0:396:14163:-1265.94,-119.208,0	0/1:151:105,45:105:3749:45:1603:-99.1604,0,-267.919	1/1:100:3,97:3:104:97:3471:-302.709,-20.4002,0	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	1/1:63:0,63:0:0:63:2260:-203.663,-18.9649,0	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:25:1,24:1:36:24:864:-74.4834,-3.92748,0	0/1:441:218,223:218:7627:223:7986:-580.004,0,-531.873	1/1:136:0,136:0:0:136:4863:-437.824,-40.9401,0	1/1:43:0,43:0:0:43:1516:-136.733,-12.9443,0	0/1:4:2,2:2:68:2:72:-5.6326,0,-4.7522	0/1:167:101,66:101:3566:66:2364:-162.617,0,-257.554	1/1:31:0,31:0:0:31:1082:-97.6864,-9.33193,0	1/1:216:0,216:0:0:216:7725:-695.237,-65.0225,0	1/1:64:0,64:0:0:64:2288:-206.182,-19.2659,0	0/1:90:64,26:64:2251:26:920:-55.938,0,-168.811	0/1:265:131,134:131:4640:134:4778:-349.22,0,-331.303	0/1:240:154,86:154:5437:86:3028:-199.226,0,-383.285	1/1:166:0,166:0:0:166:5944:-535.068,-49.971,0	0/1:164:115,49:115:4088:49:1764:-109.675,0,-301.494	0/1:211:151,60:151:5373:60:2148:-130.07,0,-402.77	1/1:277:0,277:0:0:277:9932:-885.652,-83.3853,0	0/1:13:8,5:8:280:5:176:-12.2716,0,-20.8429	0/1:181:118,63:118:4158:63:2259:-149.086,0,-297.441	0/1:111:50,61:50:1758:61:2184:-162.501,0,-120.986	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:254:167,87:167:5864:87:3109:-203.574,0,-426.45	1/1:84:3,81:3:108:81:2891:-250.037,-15.9173,0	0/1:8:4,4:4:135:4:144:-10.9054,0,-9.9127	0/1:38:13,25:13:464:25:900:-69.6766,0,-29.7953	1/1:101:0,101:0:0:101:3589:-323.217,-30.404,0	0/1:143:107,36:107:3768:36:1277:-72.1838,0,-281.332	0/1:6:5,1:5:172:1:36:-1.79209,0,-13.9027	1/1:288:0,288:0:0:288:10316:-921.537,-86.6966,0	0/1:331:221,110:221:7809:110:3916:-252.992,0,-580.712	0/1:139:99,40:99:3466:40:1440:-88.0546,0,-255.136	1/1:81:0,81:0:0:81:2896:-260.876,-24.3834,0	0/1:317:193,124:193:6801:124:4418:-302.366,0,-495.174	0/1:288:207,81:207:7328:81:2884:-173.1,0,-557.969	0/1:55:31,24:31:1108:24:860:-61.1652,0,-78.711	1/1:60:0,60:0:0:60:2151:-193.857,-18.0618,0	0/1:149:70,79:70:2467:79:2836:-206.398,0,-169.393	0/1:37:24,13:24:860:13:468:-31.3215,0,-62.7615	0/1:200:123,77:123:4329:77:2748:-187.357,0,-308.42	0/1:135:87,48:87:3068:48:1716:-114.087,0,-219.673	0/1:265:165,100:165:5772:100:3569:-241.644,0,-422.726	1/1:131:0,131:0:0:131:4700:-423.159,-39.4349,0	1/1:102:0,102:0:0:102:3645:-328.255,-30.7051,0	0/1:185:141,44:141:5019:44:1572:-84.8042,0,-362.434	0/1:22:12,10:12:424:10:360:-26.1216,0,-31.4426	0/1:159:115,44:115:4045:44:1559:-92.7371,0,-299.746	1/1:80:0,80:0:0:80:2854:-257.097,-24.0824,0	1/1:212:0,212:0:0:212:7603:-683.287,-63.8184,0	0/1:113:84,29:84:2971:29:1036:-59.5375,0,-222.491	0/1:81:50,31:50:1779:31:1088:-73.8287,0,-129.921	1/1:34:0,34:0:0:34:1220:-110.107,-10.235,0	1/1:106:1,105:1:36:105:3755:-334.803,-28.563,0	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:113:78,35:78:2755:35:1223:-76.3537,0,-195.037	0/1:126:78,48:78:2759:48:1707:-115.985,0,-195.372	1/1:32:0,32:0:0:32:1144:-103.27,-9.63296,0	0/1:80:59,21:59:2070:21:736:-42.4781,0,-152.154	0/1:126:99,27:99:3473:27:964:-49.147,0,-262.806	1/1:96:0,96:0:0:96:3422:-308.194,-28.8989,0	1/1:125:0,125:0:0:125:4471:-402.559,-37.6288,0
chr11	3178513	.	C	T	339673	PASS	AB=0.490258;ABP=12.1916;AC=135;AF=0.718085;AN=188;AO=12917;CIGAR=1X;DP=18609;DPB=18609;DPRA=0;EPP=28051.9;EPPR=12360.9;GTI=1;LEN=1;MEANALT=1.01064;MQM=53.724;MQMR=48.5201;NS=94;NUMALT=1;ODDS=5.8654;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=461723;QR=202788;RO=5691;RPL=6400;RPP=5.31155;RPPR=33.1389;RPR=6517;RUN=1;SAF=6400;SAP=5.31155;SAR=6517;SRF=2986;SRP=33.1389;SRR=2705;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:143:64,79:64:2280:79:2832:-211.67,0,-150.532	0/1:216:89,127:89:3196:127:4534:-341.315,0,-194.48	0/1:322:178,144:178:6365:144:5128:-363.925,0,-454.014	0/1:366:214,152:214:7576:152:5443:-377.809,0,-545.06	1/1:154:5,149:5:180:149:5343:-462.858,-29.8066,0	1/1:155:0,155:0:0:155:5524:-493.479,-46.6597,0	0/1:261:123,138:123:4403:138:4900:-360.933,0,-302.371	0/1:371:186,185:186:6575:185:6628:-483.163,0,-442.084	0/1:248:131,117:131:4680:117:4166:-298.682,0,-322.963	0/1:168:75,93:75:2675:93:3324:-247.611,0,-181.837	1/1:120:0,120:0:0:120:4297:-384.851,-36.1236,0	0/1:193:90,103:90:3210:103:3674:-270.46,0,-215.692	0/1:154:81,73:81:2899:73:2607:-188.015,0,-197.198	1/1:120:0,120:0:0:120:4292:-383.412,-36.1236,0	1/1:172:1,171:1:36:171:6136:-544.363,-48.1789,0	1/1:98:0,98:0:0:98:3508:-314.49,-29.5009,0	0/1:89:55,34:55:1956:34:1187:-79.8375,0,-133.724	1/1:96:0,96:0:0:96:3448:-308.962,-28.8989,0	0/1:81:32,49:32:1140:49:1755:-133.251,0,-69.5319	0/1:348:165,183:165:5908:183:6545:-480.749,0,-407.299	1/1:323:0,323:0:0:323:11532:-1032.5,-97.2327,0	0/1:240:159,80:159:5649:80:2868:-185.182,0,-423.088	0/1:301:152,149:152:5407:149:5335:-387.46,0,-386.474	0/1:276:95,181:95:3412:181:6467:-494.4,0,-205.851	1/1:279:1,278:1:36:278:9931:-887.89,-80.4389,0	0/1:542:274,268:274:9788:268:9572:-692.53,0,-688.597	1/1:435:0,435:0:0:435:15568:-1394.36,-130.948,0	1/1:72:0,72:0:0:72:2567:-229.753,-21.6742,0	1/1:404:0,404:0:0:404:14451:-1291.66,-121.616,0	0/1:222:106,116:106:3770:116:4144:-304.04,0,-247.843	1/1:211:1,210:1:36:210:7478:-664.901,-59.9439,0	1/1:19:0,19:0:0:19:684:-61.7554,-5.71957,0	1/1:73:0,73:0:0:73:2619:-235.738,-21.9752,0	1/1:13:1,12:1:36:12:432:-35.5698,-0.315115,0	1/1:17:0,17:0:0:17:608:-54.9212,-5.11751,0	1/1:28:1,27:1:36:27:972:-84.1458,-4.83057,0	0/1:448:225,223:225:7986:223:7997:-579.264,0,-559.737	1/1:311:0,311:0:0:311:11148:-995.335,-93.6203,0	1/1:114:0,114:0:0:114:4075:-364.501,-34.3174,0	0/1:6:3,3:3:108:3:108:-8.24581,0,-7.61171	0/1:250:103,147:103:3612:147:5251:-394.578,0,-237.106	1/1:50:0,50:0:0:50:1779:-159.617,-15.0515,0	1/1:394:0,394:0:0:394:14075:-1260.53,-118.606,0	1/1:191:0,191:0:0:191:6864:-613.29,-57.4967,0	0/1:137:64,73:64:2273:73:2612:-191.795,0,-157.108	0/1:267:133,134:133:4768:134:4750:-346.108,0,-342.406	0/1:295:156,139:156:5552:139:4975:-357.096,0,-372.171	1/1:345:0,345:0:0:345:12375:-1107.64,-103.855,0	0/1:229:115,114:115:4087:114:4041:-293.152,0,-281.917	0/1:289:151,138:151:5397:138:4933:-355.365,0,-381.365	1/1:284:0,284:0:0:284:10178:-907.356,-85.4925,0	0/1:19:9,10:9:324:10:360:-26.5606,0,-22.7748	0/1:248:120,128:120:4271:128:4604:-338.136,0,-286.942	0/1:114:51,63:51:1789:63:2255:-167.976,0,-122.862	1/1:32:0,32:0:0:32:1140:-102.578,-9.63296,0	0/1:304:174,130:174:6187:130:4633:-323.457,0,-438.624	1/1:114:3,111:3:108:111:3967:-345.614,-24.9482,0	0/1:9:4,5:4:144:5:180:-13.8428,0,-10.4428	0/1:40:14,26:14:504:26:932:-71.9693,0,-32.7944	1/1:201:0,201:0:0:201:7167:-641.59,-60.507,0	0/1:198:107,91:107:3823:91:3258:-232.558,0,-269.498	0/1:12:5,7:5:180:7:252:-19.2803,0,-12.7077	1/1:291:0,291:0:0:291:10369:-926.007,-87.5997,0	0/1:435:228,207:228:8160:207:7411:-533.327,0,-578.726	0/1:183:101,82:101:3620:82:2940:-208.493,0,-255.038	1/1:153:0,153:0:0:153:5488:-492.058,-46.0576,0	0/1:403:194,209:194:6887:209:7448:-546.531,0,-475.041	0/1:337:216,121:216:7734:121:4292:-283.643,0,-579.705	0/1:67:31,36:31:1108:36:1283:-95.3478,0,-74.9393	1/1:162:0,162:0:0:162:5797:-519.912,-48.7669,0	0/1:148:72,76:72:2584:76:2723:-197.994,0,-179.017	0/1:52:26,26:26:932:26:927:-67.7793,0,-64.8451	0/1:268:128,140:128:4549:140:5009:-369.244,0,-305.007	0/1:205:86,119:86:3060:119:4268:-320.098,0,-199.052	0/1:294:165,129:165:5907:129:4577:-321.558,0,-424.618	1/1:270:0,270:0:0:270:9646:-863.664,-81.2781,0	1/1:178:0,178:0:0:178:6356:-570.252,-53.5833,0	0/1:240:144,96:144:5160:96:3429:-234.207,0,-357.059	0/1:31:13,18:13:464:18:644:-48.4985,0,-32.3348	0/1:198:116,82:116:4103:82:2945:-204.49,0,-293.362	1/1:192:0,192:0:0:192:6888:-616.545,-57.7978,0	1/1:386:0,386:0:0:386:13830:-1238.21,-116.198,0	0/1:165:84,81:84:2995:81:2912:-210.058,0,-208.563	0/1:121:49,72:49:1738:72:2579:-194.244,0,-115.238	1/1:162:0,162:0:0:162:5777:-514.615,-48.7669,0	1/1:286:2,284:2:57:284:10134:-899.363,-80.9208,0	1/1:61:0,61:0:0:61:2196:-196.686,-18.3628,0	0/1:156:80,76:80:2821:76:2705:-195.996,0,-187.689	0/1:158:79,79:79:2815:79:2801:-203.621,0,-189.619	1/1:63:0,63:0:0:63:2242:-200.865,-18.9649,0	0/1:126:62,64:62:2193:64:2284:-166.841,0,-148.096	0/1:144:99,45:99:3539:45:1612:-101.632,0,-262.872	1/1:193:0,193:0:0:193:6857:-614.692,-58.0988,0	1/1:250:0,25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chr11	3211502	.	A	G	112636	PASS	AB=0.475027;ABP=28.0637;AC=134;AF=0.712766;AN=188;AO=5403;CIGAR=1X;DP=7840;DPB=7840;DPRA=0;EPP=11382.1;EPPR=5165.3;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.98;MQMR=59.9852;NS=94;NUMALT=1;ODDS=2.03061;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=193346;QR=87089;RO=2433;RPL=5362;RPP=11382.1;RPPR=5165.3;RPR=41;RUN=1;SAF=0;SAP=11735.5;SAR=5403;SRF=0;SRP=5286.2;SRR=2433;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:27:14,13:14:500:13:468:-34.3318,0,-37.2084	0/1:70:34,36:34:1220:36:1292:-95.5117,0,-89.0347	0/1:223:113,110:113:4024:110:3925:-286.312,0,-295.218	0/1:281:143,138:143:5110:138:4935:-359.71,0,-375.416	1/1:49:2,47:2:72:47:1692:-145.73,-7.91375,0	1/1:6:0,6:0:0:6:212:-19.4248,-1.80618,0	0/1:83:27,56:27:959:56:2008:-156.008,0,-61.6399	0/1:116:56,60:56:1980:60:2156:-159.387,0,-143.552	0/1:56:26,30:26:932:30:1063:-79.1223,0,-67.3412	0/1:89:29,60:29:1044:60:2137:-165.788,0,-67.4831	1/1:37:0,37:0:0:37:1332:-120.182,-11.1381,0	0/1:69:31,38:31:1116:38:1352:-101.209,0,-79.9806	0/1:55:23,32:23:819:32:1144:-86.7129,0,-57.4749	1/1:53:0,53:0:0:53:1908:-171.998,-15.9546,0	1/1:55:0,55:0:0:55:1976:-178.115,-16.5567,0	1/1:37:0,37:0:0:37:1323:-119.371,-11.1381,0	0/1:23:13,10:13:468:10:356:-25.4576,0,-35.536	1/1:21:0,21:0:0:21:748:-67.6453,-6.32163,0	0/1:22:12,10:12:432:10:356:-25.7586,0,-32.5985	0/1:165:78,87:78:2791:87:3124:-231.711,0,-201.76	0/1:153:77,75:77:2764:75:2680:-195.457,0,-203.013	0/1:121:92,29:92:3308:29:1044:-57.8502,0,-261.513	0/1:84:34,50:34:1220:50:1777:-134.925,0,-84.8203	0/1:35:14,21:14:500:21:740:-56.3873,0,-34.8001	1/1:78:0,77:0:0:77:2760:-248.282,-23.1793,0	0/1:200:119,81:119:4284:81:2884:-199.589,0,-325.529	1/1:194:0,194:0:0:194:6952:-625.744,-58.3998,0	1/1:29:0,29:0:0:29:1039:-93.8241,-8.72987,0	1/1:267:0,267:0:0:267:9564:-860.677,-80.375,0	0/1:122:65,57:65:2324:57:2044:-147.506,0,-172.695	1/1:96:0,96:0:0:96:3435:-309.362,-28.8989,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:31:0,31:0:0:31:1112:-100.391,-9.33193,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:22:0,22:0:0:22:779:-70.4321,-6.62266,0	1/1:18:0,18:0:0:18:639:-57.8382,-5.41854,0	0/1:149:76,73:76:2724:73:2624:-191.553,0,-200.55	1/1:148:0,148:0:0:148:5281:-475.427,-44.5524,0	1/1:43:0,43:0:0:43:1528:-137.812,-12.9443,0	0/1:15:9,6:9:315:6:216:-15.2751,0,-24.1718	0/1:114:49,65:49:1760:65:2324:-175.103,0,-124.366	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	1/1:116:0,116:0:0:116:4162:-374.762,-34.9195,0	1/1:29:1,28:1:36:28:1008:-87.5313,-5.22717,0	0/1:39:27,12:27:968:12:432:-27.481,0,-75.6972	0/1:91:57,34:57:2031:34:1220:-82.7131,0,-155.668	0/1:81:50,31:50:1787:31:1116:-76.3683,0,-136.728	1/1:180:0,180:0:0:180:6447:-580.274,-54.1854,0	0/1:82:50,32:50:1787:32:1148:-78.942,0,-136.427	0/1:182:85,97:85:3060:97:3484:-258.983,0,-220.84	1/1:129:0,129:0:0:129:4622:-416.141,-38.8329,0	0/1:11:9,2:9:324:2:68:-3.14638,0,-26.1945	0/1:139:75,64:75:2684:64:2285:-164.067,0,-199.962	0/1:65:34,31:34:1224:31:1108:-80.464,0,-90.9001	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	0/1:162:92,70:92:3304:70:2512:-177.565,0,-248.811	1/1:44:0,44:0:0:44:1580:-142.492,-13.2453,0	0/1:18:9,9:9:320:9:324:-24.0873,0,-23.7238	0/1:25:13,12:13:464:12:428:-31.3331,0,-34.5718	1/1:62:0,62:0:0:62:2211:-199.254,-18.6639,0	0/1:78:43,35:43:1520:35:1260:-90.2251,0,-113.61	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	1/1:233:0,233:0:0:233:8306:-747.546,-70.14,0	0/1:145:67,78:67:2400:78:2780:-206.79,0,-172.607	0/1:37:24,13:24:864:13:468:-31.3215,0,-66.9445	1/1:105:0,105:0:0:105:3758:-338.418,-31.6082,0	0/1:132:70,62:70:2495:62:2228:-161.048,0,-185.067	0/1:145:89,56:89:3192:56:2012:-137.704,0,-243.854	0/1:16:8,8:8:269:8:284:-21.0869,0,-19.7196	1/1:49:0,49:0:0:49:1737:-156.613,-14.7505,0	0/1:47:35,12:35:1256:12:432:-25.0728,0,-99.1969	0/1:43:26,17:26:936:17:612:-42.4691,0,-71.6152	0/1:82:32,50:32:1139:50:1796:-137.238,0,-78.1339	0/1:66:23,43:23:820:43:1537:-118.755,0,-54.2545	0/1:80:41,39:41:1467:39:1392:-101.496,0,-108.243	1/1:252:1,250:1:36:250:8943:-801.251,-72.3201,0	1/1:74:0,74:0:0:74:2644:-238.207,-22.2762,0	0/1:113:66,47:66:2363:47:1688:-118.191,0,-178.911	0/1:29:21,8:21:756:8:288:-17.5375,0,-59.6374	0/1:133:73,60:73:2620:60:2137:-152.559,0,-196.01	1/1:98:0,98:0:0:98:3495:-314.761,-29.5009,0	1/1:197:1,195:1:27:195:6965:-624.169,-56.617,0	0/1:41:23,18:23:824:18:639:-45.496,0,-62.1411	0/1:59:33,26:33:1184:26:932:-66.4381,0,-89.1075	1/1:32:0,32:0:0:32:1152:-103.99,-9.63296,0	1/1:87:0,87:0:0:87:3111:-280.216,-26.1896,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:50:24,26:24:864:26:932:-69.1474,0,-63.0311	0/1:36:17,19:17:612:19:684:-51.0532,0,-44.5764	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	0/1:72:40,32:40:1431:32:1148:-81.9557,0,-107.413	0/1:43:32,11:32:1143:11:392:-22.6758,0,-90.2344	1/1:188:1,187:1:36:187:6695:-599.027,-52.9954,0	1/1:69:0,69:0:0:69:2475:-223.003,-20.7711,0
chr11	3362411	.	A	G	393879	PASS	AB=0.477102;ABP=57.0085;AC=136;AF=0.723404;AN=188;AO=15422;CIGAR=1X;DP=21643;DPB=21643;DPRA=0;EPP=33448;EPPR=13438;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9736;MQMR=59.9902;NS=94;NUMALT=1;ODDS=17.043;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=543723;QR=221884;RO=6219;RPL=4468;RPP=5926.36;RPPR=1880.75;RPR=10954;RUN=1;SAF=4463;SAP=5944.64;SAR=10959;SRF=1942;SRP=1906.75;SRR=4277;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:140:71,69:71:2528:69:2418:-175.728,0,-185.628	0/1:168:90,78:90:3201:78:2800:-201.667,0,-237.74	0/1:225:139,86:139:4935:86:3040:-206.098,0,-376.57	0/1:363:153,210:153:5483:210:7465:-562.625,0,-384.322	1/1:155:1,154:1:36:154:5433:-485.507,-43.0614,0	1/1:90:1,89:1:36:89:3173:-282.196,-23.4944,0	0/1:191:97,94:97:3456:94:3321:-241.61,0,-253.757	0/1:246:117,129:117:4158:129:4579:-338.222,0,-300.159	0/1:295:148,147:148:5253:147:5180:-377.539,0,-384.106	0/1:126:65,61:65:2328:61:2147:-155.565,0,-171.85	1/1:199:0,199:0:0:199:6924:-623.235,-59.905,0	0/1:141:66,75:66:2307:75:2593:-191.174,0,-165.444	0/1:85:31,54:31:1095:54:1892:-144.968,0,-73.2715	1/1:86:0,86:0:0:86:2975:-267.984,-25.8886,0	1/1:68:0,68:0:0:68:2394:-215.717,-20.47,0	1/1:85:0,85:0:0:85:2957:-266.362,-25.5876,0	0/1:66:38,28:38:1360:28:981:-68.7331,0,-102.833	1/1:29:0,29:0:0:29:1006:-90.8491,-8.72987,0	0/1:95:43,52:43:1532:52:1835:-136.832,0,-109.575	0/1:258:137,121:137:4896:121:4237:-303.846,0,-363.127	1/1:234:0,234:0:0:234:8158:-734.247,-70.441,0	0/1:83:58,25:58:2068:25:888:-55.2535,0,-161.406	0/1:258:124,134:124:4390:134:4741:-349.184,0,-317.609	0/1:139:51,88:51:1824:88:3143:-241.252,0,-122.598	1/1:96:1,95:1:21:95:3319:-296.828,-26.7989,0	0/1:436:240,196:240:8595:196:6944:-493.781,0,-642.296	1/1:348:0,348:0:0:348:12315:-1108.2,-104.758,0	1/1:45:0,45:0:0:45:1582:-142.669,-13.5464,0	1/1:333:0,333:0:0:333:11823:-1063.94,-100.243,0	0/1:223:103,120:103:3632:120:4249:-315.461,0,-259.955	1/1:250:1,249:1:36:249:8709:-780.065,-71.6592,0	1/1:814:2,811:2:72:811:28580:-2564.55,-238.26,0	1/1:452:0,452:0:0:452:15975:-1437.45,-136.066,0	1/1:596:1,595:1:36:595:20956:-1881.87,-175.816,0	1/1:1208:6,1202:6:216:1202:42276:-3783.6,-343.854,0	1/1:1158:2,1155:2:72:1155:40767:-3660.89,-341.815,0	0/1:152:78,74:78:2784:74:2607:-189.121,0,-205.045	1/1:94:0,94:0:0:94:3327:-299.648,-28.2968,0	1/1:134:0,134:0:0:134:4698:-422.986,-40.338,0	0/1:573:306,267:306:10974:267:9427:-675.914,0,-815.061	0/1:203:85,118:85:2993:118:4124:-310.238,0,-208.492	1/1:80:0,80:0:0:80:2834:-255.299,-24.0824,0	1/1:272:0,272:0:0:272:9615:-865.312,-81.8802,0	1/1:90:0,90:0:0:90:3157:-284.356,-27.0927,0	0/1:62:24,38:24:849:38:1343:-102.505,0,-58.064	0/1:199:105,94:105:3731:94:3332:-240.137,0,-276.083	0/1:227:115,112:115:4098:112:3990:-290.958,0,-300.672	1/1:241:1,240:1:32:240:8414:-754.077,-69.3489,0	0/1:136:63,73:63:2248:73:2588:-192.228,0,-161.643	0/1:150:72,78:72:2538:78:2751:-202.677,0,-183.517	1/1:186:0,186:0:0:186:6558:-590.308,-55.9916,0	0/1:689:357,332:357:12819:332:11710:-846.375,0,-946.112	1/1:129:0,129:0:0:129:4560:-410.57,-38.8329,0	0/1:151:61,90:61:2171:90:3184:-241.134,0,-150.201	1/1:240:0,240:0:0:240:8495:-764.558,-72.2472,0	0/1:194:101,93:101:3586:93:3303:-239.091,0,-264.547	1/1:124:0,124:0:0:124:4388:-395.093,-37.3277,0	0/1:811:433,378:433:15514:378:13348:-956.728,0,-1151.83	0/1:402:256,146:256:9159:146:5145:-342.181,0,-703.11	1/1:195:1,194:1:36:194:6909:-618.282,-55.1026,0	0/1:77:48,29:48:1688:29:984:-65.685,0,-129.024	0/1:482:265,217:265:9487:217:7620:-540.75,0,-708.689	1/1:39:0,39:0:0:39:1382:-124.677,-11.7402,0	0/1:299:157,142:157:5599:142:5029:-362.751,0,-414.026	0/1:121:46,75:46:1628:75:2646:-201.96,0,-110.384	1/1:134:0,134:0:0:134:4742:-426.941,-40.338,0	0/1:319:164,155:164:5892:155:5423:-392.117,0,-434.359	0/1:213:129,84:129:4623:84:2971:-203.503,0,-352.113	0/1:193:112,81:112:3978:81:2838:-197.533,0,-300.111	1/1:81:0,81:0:0:81:2872:-258.717,-24.3834,0	0/1:50:25,25:25:866:25:869:-63.4724,0,-63.2024	0/1:295:174,121:174:6236:121:4273:-295.926,0,-472.528	0/1:148:80,68:80:2855:68:2398:-171.522,0,-212.635	0/1:96:46,50:46:1639:50:1760:-129.782,0,-118.899	0/1:410:214,196:214:7592:196:6940:-501.248,0,-559.903	1/1:208:0,208:0:0:208:7373:-663.621,-62.6142,0	1/1:215:0,215:0:0:215:7571:-681.437,-64.7215,0	0/1:112:47,65:47:1663:65:2298:-173.365,0,-116.241	0/1:628:387,241:387:13894:241:8551:-580.356,0,-1061.18	0/1:186:98,88:98:3516:88:3100:-223.22,0,-260.658	1/1:131:0,131:0:0:131:4626:-416.506,-39.4349,0	1/1:364:0,364:0:0:364:12908:-1161.55,-109.575,0	0/1:60:21,39:21:748:39:1338:-102.652,0,-49.5835	0/1:82:34,48:34:1199:48:1692:-127.88,0,-83.5303	1/1:63:0,63:0:0:63:2195:-197.814,-18.9649,0	1/1:162:1,161:1:36:161:5654:-505.391,-45.1686,0	1/1:29:0,29:0:0:29:971:-87.6905,-8.72987,0	0/1:108:57,51:57:2002:51:1762:-126.345,0,-147.942	0/1:93:48,45:48:1720:45:1604:-116.654,0,-127.09	1/1:200:0,200:0:0:200:7055:-635.016,-60.206,0	0/1:304:154,150:154:5510:150:5274:-383.287,0,-404.512	0/1:94:67,27:67:2379:27:934:-56.0744,0,-186.071	1/1:27:0,27:0:0:27:939:-84.8199,-8.12781,0	1/1:102:1,101:1:36:101:3549:-316.023,-27.1068,0
chr11	3369062	.	A	G	97560.9	PASS	AB=0.491282;ABP=15.7703;AC=95;AF=0.505319;AN=188;AO=9501;CIGAR=1X;DP=19333;DPB=19333;DPRA=0;EPP=20099.2;EPPR=20693.6;GTI=1;LEN=1;MEANALT=1.02128;MQM=29.0661;MQMR=28.7963;NS=94;NUMALT=1;ODDS=118.783;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=339165;QR=351305;RO=9830;RPL=9448;RPP=20176.4;RPPR=20830.6;RPR=53;RUN=1;SAF=9;SAP=20556.1;SAR=9492;SRF=16;SRP=21209.8;SRR=9814;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:62:35,27:35:1248:27:951:-48.955,0,-70.0625	0/1:400:190,210:190:6767:210:7491:-409.763,0,-350.417	0/1:223:115,108:115:4113:108:3851:-206.426,0,-224.534	0/1:463:230,233:230:8236:233:8332:-450.296,0,-427.41	0/1:164:81,83:81:2904:83:2976:-161.308,0,-157.847	0/1:141:78,63:78:2796:63:2238:-116.775,0,-155.731	0/1:279:165,114:165:5924:114:4083:-202.239,0,-335.732	0/1:290:153,137:153:5469:137:4889:-257.417,0,-300.949	0/1:89:42,47:42:1512:47:1647:-91.4653,0,-77.7137	0/1:152:67,85:67:2400:85:3022:-168.719,0,-125.13	0/1:108:58,50:58:2088:50:1796:-93.9329,0,-114.644	0/1:150:72,78:72:2564:78:2787:-152.762,0,-130.693	0/1:125:68,57:68:2432:57:2048:-106.823,0,-130.108	0/1:125:62,63:62:2219:63:2252:-122.192,0,-118.743	0/1:117:47,70:47:1684:70:2499:-142.85,0,-81.0291	0/1:92:54,38:54:1936:38:1360:-68.4256,0,-109.713	0/1:119:61,58:61:2180:58:2061:-109.356,0,-117.707	0/1:88:48,40:48:1715:40:1440:-75.1903,0,-91.945	0/1:74:33,41:33:1172:41:1454:-81.1357,0,-58.366	0/1:728:376,352:376:13422:352:12557:-668.734,0,-702.294	0/1:423:241,182:241:8604:182:6490:-330.934,0,-482.872	0/1:224:130,94:130:4636:94:3376:-164.776,0,-243.942	0/1:199:95,104:95:3408:104:3705:-204.324,0,-174.715	0/1:249:90,159:90:3224:159:5684:-329.122,0,-152.705	0/1:169:74,95:74:2648:95:3378:-188.94,0,-136.58	0/1:573:319,254:319:11405:254:9072:-452.058,0,-596.545	0/1:556:312,244:312:11146:244:8728:-451.569,0,-621.272	0/1:73:29,44:29:1040:44:1580:-89.4642,0,-51.5375	0/1:681:405,276:405:14470:276:9815:-465.994,0,-790.936	0/1:217:125,92:125:4449:92:3312:-167.331,0,-240.428	0/1:324:191,133:191:6844:133:4756:-241.96,0,-383.857	0/1:22:12,10:12:432:10:360:-18.8922,0,-22.8738	0/1:32:22,10:22:783:10:351:-15.4218,0,-46.9821	0/1:7:1,6:1:36:6:216:-13.4087,0,-0.54139	0/1:24:14,10:14:504:10:360:-17.9762,0,-28.526	0/1:18:11,7:11:396:7:248:-12.5474,0,-22.7923	0/1:347:192,155:192:6888:155:5537:-276.414,0,-361.886	0/1:313:164,149:164:5837:149:5300:-280.448,0,-311.884	0/1:106:52,54:52:1851:54:1940:-104.918,0,-98.9121	1/1:6:0,6:0:0:6:207:-15.0524,-1.80618,0	0/1:327:137,190:137:4857:190:6792:-376.6,0,-237.236	0/1:85:48,37:48:1707:37:1316:-68.3706,0,-96.2397	0/1:309:148,161:148:5248:161:5738:-314.998,0,-284.105	0/1:146:67,79:67:2386:79:2836:-156.573,0,-126.912	0/1:118:63,55:63:2260:55:1955:-104.142,0,-123.839	0/1:209:104,105:104:3724:105:3759:-197.037,0,-188.515	0/1:232:103,128:103:3704:128:4581:-252.924,0,-185.717	0/1:315:161,154:161:5749:154:5501:-293.161,0,-311.476	0/1:224:109,115:109:3904:115:4095:-223.512,0,-209.995	0/1:329:160,169:160:5725:169:6050:-334.154,0,-294.471	0/1:290:142,148:142:5084:148:5277:-273.531,0,-261.771	0/1:29:11,18:11:392:18:640:-36.9213,0,-18.6354	0/1:321:173,148:173:6166:148:5300:-276.226,0,-341.306	0/1:112:58,54:58:2076:54:1928:-99.2411,0,-107.858	0/1:34:21,13:21:744:13:464:-22.9654,0,-41.5173	0/1:293:143,150:143:5115:150:5352:-291.738,0,-273.533	0/1:136:73,63:73:2604:63:2239:-115.88,0,-137.091	0/1:23:12,11:12:432:11:392:-20.2049,0,-22.8213	0/1:30:13,17:13:468:17:610:-33.0793,0,-24.0388	0/1:131:70,61:70:2500:61:2161:-114.453,0,-139.205	0/1:181:104,77:104:3728:77:2758:-140.616,0,-197.541	0/1:26:16,10:16:561:10:360:-19.2596,0,-29.6639	0/1:369:167,201:167:5961:201:7153:-381.375,0,-291.707	0/1:370:181,189:181:6456:189:6746:-365.762,0,-346.292	0/1:214:102,112:102:3664:112:4007:-220.978,0,-185.99	0/1:163:68,95:68:2417:95:3382:-191.066,0,-122.721	0/1:481:236,245:236:8398:245:8730:-472.451,0,-434.716	0/1:305:148,157:148:5295:157:5626:-305.668,0,-283.263	0/1:47:24,23:24:856:23:824:-42.9452,0,-45.6037	0/1:143:79,64:79:2828:64:2275:-119.482,0,-157.852	0/1:120:61,59:61:2188:59:2112:-108.71,0,-114.883	0/1:56:34,22:34:1216:22:780:-37.6563,0,-66.0934	0/1:221:109,112:109:3873:112:3999:-216.483,0,-209.591	0/1:156:98,58:98:3520:58:2067:-98.5904,0,-202.749	0/1:307:158,149:158:5647:149:5328:-287.735,0,-308.215	0/1:401:196,205:196:7025:205:7340:-397.077,0,-358.665	0/1:201:89,112:89:3177:112:3969:-221.974,0,-164.956	0/1:202:92,110:92:3300:110:3916:-217.233,0,-163.535	0/1:34:15,19:15:540:19:684:-38.2876,0,-26.6427	0/1:313:139,174:139:4969:174:6227:-346.346,0,-245.494	0/1:327:171,156:171:6078:156:5566:-298.726,0,-328.671	0/1:571:288,283:288:10302:283:10132:-542.173,0,-557.499	0/1:172:81,91:81:2912:91:3251:-177.848,0,-152.031	0/1:119:66,53:66:2368:53:1900:-97.5837,0,-131.566	0/1:191:87,104:87:3116:104:3716:-205.697,0,-159.908	0/1:254:118,136:118:4214:136:4863:-267.71,0,-212.453	0/1:57:30,27:30:1080:27:940:-50.1779,0,-59.683	0/1:132:60,72:60:2139:72:2562:-142.125,0,-107.467	0/1:151:77,74:77:2755:74:2638:-141,0,-144.696	0/1:88:51,37:51:1820:37:1332:-65.7337,0,-103.237	0/1:129:69,60:69:2455:60:2144:-112.841,0,-130.173	0/1:145:71,74:71:2540:74:2639:-141.854,0,-127.5	0/1:231:102,129:102:3628:129:4558:-254.45,0,-187.094	0/1:211:113,98:113:4052:98:3506:-184.925,0,-223.775
chr11	3369074	.	TGAA	TGAG,CGAG	73285.4	PASS	AB=0.391234,0.222552;ABP=2021.43,6994.09;AC=72,21;AF=0.382979,0.111702;AN=188;AO=7685,2327;CIGAR=3M1X,1X2M1X;DP=19674;DPB=19674.5;DPRA=35.5851,38.7259;EPP=16690.8,5056.03;EPPR=20840.5;GTI=6;LEN=1,4;MEANALT=2.09783,2.75556;MQM=29.3042,27.3507;MQMR=28.8795;NS=94;NUMALT=2;ODDS=1.56153;PAIRED=0,0;PAIREDR=0;PAO=0,2;PQA=0,72;PQR=0;PRO=0;QA=275105,81971;QR=338259;RO=9596;RPL=7685,2327;RPP=16690.8,5056.03;RPPR=20840.5;RPR=0,0;RUN=1,1;SAF=0,0;SAP=16690.8,5056.03;SAR=7685,2327;SRF=0;SRP=20840.5;SRR=9596;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:64:27,37,0:27:930:37,0:1315,0:-73.9401,0,-47.9288,-82.0679,-59.0669,-140.858	0/1:410:213,111,85:213:7497:111,85:3988,2952:-185.587,0,-436.038,-74.6228,-294.364,-518.473	0/1:229:111,118,0:111:3910:118,0:4216,0:-230.314,0,-210.976,-263.728,-246.498,-509.946	0/1:474:234,124,115:234:8275:124,115:4456,4056:-207.817,0,-479.828,-40.6855,-279.578,-523.209	0/1:157:80,77,0:80:2851:77,0:2764,0:-149.32,0,-155.189,-173.402,-178.368,-351.488	0/1:146:64,81,0:64:2265:81,0:2896,0:-161.581,0,-116.916,-180.847,-141.299,-322.224	0/1:289:117,172,0:117:4119:172,0:6160,0:-350.249,0,-204.392,-385.469,-256.17,-641.36	0/1:292:141,147,1:141:4984:147,1:5264,36:-286.739,0,-266.977,-327.101,-309.146,-638.013	0/1:91:46,23,22:46:1618:23,22:824,773:-37.1527,0,-94.6328,-4.68622,-55.2402,-99.6116	0/1:157:86,70,0:86:3010:70,0:2510,0:-131.266,0,-167.836,-157.155,-188.908,-345.994	0/1:111:50,61,0:50:1756:61,0:2183,0:-121.67,0,-91.9085,-136.722,-110.271,-246.713	0/2:151:77,35,39:77:2711:35,39:1260,1368:-57.0225,-2.80609,-163.076,0,-93.4075,-159.055	0/2:127:60,30,36:60:2128:30,36:1076,1293:-56.8703,-7.75394,-131.819,0,-65.9139,-122.248	0/1:126:63,63,0:63:2216:63,0:2268,0:-122.389,0,-120.124,-141.354,-139.089,-280.162	0/1:117:69,27,20:69:2444:27,20:972,709:-38.5558,0,-145.263,-17.8764,-111.937,-165.237	0/1:93:38,55,0:38:1341:55,0:1971,0:-112.253,0,-67.6046,-123.692,-84.1613,-207.573	0/1:121:58,63,0:58:2043:63,0:2251,0:-120.413,0,-108.51,-137.873,-127.475,-265.072	0/1:88:42,25,21:42:1470:25,21:896,755:-43.1503,0,-85.0898,-12.0754,-48.8943,-98.3584	0/1:75:41,19,15:41:1457:19,15:676,513:-29.1762,0,-85.3742,-11.0161,-60.5896,-97.582	0/2:740:357,179,202:357:12626:179,202:6393,7071:-309.303,-17.1297,-753.552,0,-390.663,-729.487	0/1:426:183,242,0:183:6406:242,0:8671,0:-485.363,0,-328.355,-540.452,-401.204,-941.736	0/2:228:94,41,93:94:3302:41,93:1464,3271:-163.24,-103.211,-292.589,0,-113.392,-173.719	0/1:199:102,59,37:102:3610:59,37:2104,1291:-99.3873,0,-208.286,-53.5141,-149.467,-268.413	0/1:258:165,92,1:165:5837:92,1:3281,36:-154.741,0,-339.505,-202.329,-365.117,-569.212	0/1:172:97,75,0:97:3395:75,0:2692,0:-138.392,0,-191.595,-167.592,-214.172,-381.484	0/2:585:257,136,189:257:9021:136,189:4857,6636:-312.1,-95.1029,-604.069,0,-255.54,-493.004	0/1:559:242,315,0:242:8570:315,0:11250,0:-629.037,0,-442.998,-701.887,-537.822,-1239.74	0/1:74:45,29,0:45:1598:29,0:1044,0:-51.3245,0,-90.9611,-64.8708,-99.6909,-164.282	0/1:697:284,411,0:284:10028:411,0:14699,0:-802.06,0,-479.948,-887.552,-603.671,-1491.14	0/2:227:94,58,74:94:3325:58,74:2084,2599:-124.902,-23.3246,-213.697,0,-77.9552,-185.546	0/1:323:129,192,1:129:4582:192,1:6877,36:-389.094,0,-228.879,-425.925,-284.675,-712.281	0/2:22:10,4,8:10:348:4,8:144,287:-13.6286,-7.68137,-28.3937,0,-12.9527,-19.4977	0/1:31:10,21,0:10:343:21,0:756,0:-45.0457,0,-15.56,-48.056,-21.8816,-69.66	0/1:8:7,1,0:7:248:1,0:36,0:-0.24036,0,-15.6162,-2.34757,-15.9172,-17.9978	0/1:25:10,15,0:10:342:15,0:536,0:-30.6901,0,-17.0248,-33.7004,-21.5403,-54.9663	0/1:18:7,11,0:7:234:11,0:396,0:-22.7923,0,-12.1868,-24.8995,-15.4981,-40.1198	0/1:349:154,109,85:154:5422:109,85:3916,2997:-189.025,0,-296.32,-60.1858,-153.932,-363.724	0/1:319:152,95,71:152:5355:95,71:3404,2505:-167.52,0,-306.208,-65.1247,-186.651,-378.546	0/1:108:54,54,0:54:1920:54,0:1931,0:-103.473,0,-103.677,-119.728,-119.932,-239.381	0/0:6:6,0,0:6:205:0,0:0,0:0,-1.80618,-15.0274,-1.80618,-15.0274,-15.0274	0/2:333:192,65,72:192:6712:65,72:2328,2523:-91.6486,-3.87008,-402.784,0,-272.899,-396.794	0/1:85:38,47,0:38:1355:47,0:1684,0:-94.0891,0,-71.2713,-105.528,-85.4197,-190.666	0/1:315:161,153,0:161:5681:153,0:5497,0:-296.977,0,-310.287,-345.442,-356.344,-701.864	0/1:146:78,67,0:78:2778:67,0:2404,0:-127.449,0,-152.335,-150.929,-172.504,-323.509	0/1:117:57,60,0:57:2009:60,0:2145,0:-116.286,0,-108.781,-133.444,-126.842,-260.007	0/1:211:108,63,40:108:3812:63,40:2243,1418:-103.326,0,-212.674,-54.5867,-150.387,-274.175	0/2:239:130,50,57:130:4619:50,57:1790,2007:-79.2261,-5.25662,-277.755,0,-174.441,-270.378	0/1:327:162,163,0:162:5711:163,0:5808,0:-314.882,0,-308.636,-363.649,-357.704,-721.307	0/1:225:115,110,0:115:4021:110,0:3950,0:-212.574,0,-221.091,-247.192,-254.205,-501.116	0/1:332:162,83,79:162:5738:83,79:2984,2795:-136.186,0,-334.494,-20.3886,-194.911,-356.077	0/1:295:151,144,0:151:5347:144,0:5160,0:-265.202,0,-278.292,-310.658,-321.64,-632.027	0/1:29:18,6,5:18:603:6,5:216,174:-8.01954,0,-36.6511,-3.11643,-28.1286,-40.0539	0/1:328:151,176,0:151:5318:176,0:6315,0:-347.936,0,-279.081,-393.392,-332.062,-725.439	0/1:114:54,60,0:54:1921:60,0:2129,0:-111.804,0,-98.435,-128.06,-116.497,-244.285	0/2:36:15,6,15:15:534:6,15:216,533:-27.4668,-18.7073,-51.0204,0,-20.8458,-29.6008	0/1:302:153,149,0:153:5356:149,0:5317,0:-285.752,0,-292.4,-331.809,-337.253,-668.783	0/2:139:61,35,43:61:2141:35,43:1252,1523:-70.2319,-10.7442,-133.14,0,-55.0768,-119.977	0/1:23:11,11,0:11:396:11,0:396,0:-20.4738,0,-20.3146,-23.7851,-23.626,-47.4041	0/1:29:17,12,0:17:597:12,0:432,0:-21.8778,0,-32.9796,-26.9953,-36.5919,-63.3105	0/1:135:65,69,0:65:2288:69,0:2468,0:-136.575,0,-123.203,-156.142,-143.974,-300.064	0/2:190:81,50,58:81:2853:50,58:1800,2054:-94.2233,-8.45925,-172.508,0,-68.9514,-161.631	0/2:25:8,0,16:8:288:0,16:0,555:-30.0386,-32.4469,-50.3558,0,-17.8345,-13.018	0/2:375:203,74,98:203:7194:74,98:2651,3460:-140.657,-42.4666,-455.546,0,-276.053,-405.847	0/1:377:192,183,1:192:6705:183,1:6556,36:-350.215,0,-365.737,-405.93,-418.743,-826.449	0/1:216:111,54,51:111:3912:54,51:1927,1808:-87.2297,0,-230.355,-16.0932,-142.056,-247.337	0/1:172:95,76,0:95:3299:76,0:2700,0:-138.962,0,-184.92,-167.56,-207.798,-375.439	0/2:492:248,104,138:248:8689:104,138:3703,4897:-212.261,-53.2129,-566.457,0,-310.842,-502.997	0/1:318:161,155,2:161:5644:155,2:5556,70:-298.958,0,-307.736,-343.284,-350.255,-697.061	0/1:48:23,13,12:23:813:13,12:468,420:-22.1755,0,-45.6814,-3.48149,-23.9724,-49.4565	0/1:145:64,80,0:64:2235:80,0:2864,0:-159.861,0,-117.482,-179.127,-141.564,-320.641	0/1:120:59,61,0:59:2096:61,0:2184,0:-114.647,0,-108.173,-132.408,-126.536,-258.671	0/2:60:22,13,25:22:771:13,25:468,882:-44.2106,-21.1864,-64.5105,0,-17.5794,-39.6966	0/1:223:111,109,0:111:3878:109,0:3908,0:-210.981,0,-209.989,-244.395,-242.802,-487.149	0/1:159:59,100,0:59:2095:100,0:3588,0:-206.755,0,-100.169,-224.516,-130.272,-354.508	0/1:311:147,163,0:147:5128:163,0:5824,0:-322.525,0,-275.82,-366.776,-324.888,-691.742	0/2:408:207,96,105:207:7346:96,105:3448,3722:-155.283,-4.75732,-433.651,0,-244.95,-426.173	0/1:195:112,83,0:112:3958:83,0:2972,0:-152.302,0,-223.831,-186.017,-248.816,-434.552	0/1:206:113,48,44:113:3994:48,44:1716,1543:-72.7642,0,-235.391,-18.261,-161.316,-254.84	0/2:34:19,6,9:19:678:6,9:216,324:-12.933,-5.21758,-45.7868,0,-28.9351,-39.6537	0/2:320:178,58,83:178:6299:58,83:2076,2923:-118.607,-41.8517,-417.593,0,-262.855,-368.202	0/1:335:156,177,0:156:5523:177,0:6356,0:-343.643,0,-293.088,-390.604,-346.371,-737.054	0/1:579:286,292,0:286:10088:292,0:10436,0:-564.704,0,-542.745,-650.799,-630.646,-1281.38	0/1:177:94,44,39:94:3319:44,39:1580,1391:-71.8058,0,-194.418,-17.4738,-125.029,-213.385	0/1:123:55,68,0:55:1965:68,0:2435,0:-135.227,0,-101.166,-151.784,-121.636,-273.14	0/1:198:106,92,0:106:3734:92,0:3291,0:-170.257,0,-206.836,-202.166,-234.531,-436.419	0/1:253:135,57,60:135:4780:57,60:2040,2091:-86.9051,0,-281.525,-5.08508,-176.22,-285.693	0/1:59:28,31,0:28:978:31,0:1108,0:-61.4441,0,-52.3691,-69.8729,-61.701,-131.294	0/1:135:73,33,27:73:2566:33,27:1184,949:-51.3314,0,-150.559,-17.6384,-104.82,-169.992	0/1:151:73,40,36:73:2596:40,36:1421,1282:-67.5525,0,-148.575,-13.8905,-84.9753,-163.66	0/1:89:37,52,0:37:1323:52,0:1855,0:-106.051,0,-65.2336,-117.189,-80.8871,-197.797	0/2:133:61,30,42:61:2130:30,42:1076,1458:-67.3643,-18.823,-143.77,0,-67.0686,-121.322	0/2:144:73,16,55:73:2550:16,55:572,1949:-91.3856,-77.7189,-231.566,0,-123.013,-142.095	0/1:237:133,104,0:133:4696:104,0:3716,0:-191.014,0,-262.51,-231.051,-293.817,-524.588	0/1:215:98,117,0:98:3457:117,0:4195,0:-232.689,0,-182.23,-262.19,-217.451,-479.36
chr11	3369154	.	GGTTTA	GGGTTG,TGGTTA	235308	PASS	AB=0.459919,0.530456;ABP=95.7899,56.5786;AC=136,52;AF=0.723404,0.276596;AN=188;AO=8273,3529;CIGAR=2M1X2M1X,1X1M1X3M;DP=11933;DPB=12564.7;DPRA=0,1.08971;EPP=17898.2,7631.43;EPPR=7.35324;GTI=0;LEN=6,6;MEANALT=2.84043,3.18519;MQM=59.961,59.9496;MQMR=60;NS=94;NUMALT=2;ODDS=6.27087;PAIRED=0,0;PAIREDR=0;PAO=970.5,1846;PQA=24248,65452;PQR=24248;PRO=970.5;QA=279211,123046;QR=64;RO=2;RPL=8,4;RPP=17898.2,7631.43;RPPR=7.35324;RPR=8265,3525;RUN=1,1;SAF=0,0;SAP=17967.6,7666.14;SAR=8273,3529;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:49:0,23,26:0:0:23,26:779,903:-136.914,-73.7571,-66.8334,-63.499,0,-55.6723	1/2:115:0,62,53:0:0:62,53:2102,1807:-317.036,-146.591,-127.927,-170.425,0,-154.471	1/2:233:0,110,119:0:0:110,119:3591,4091:-622.221,-332.257,-299.143,-289.995,0,-254.173	1/2:297:0,144,152:0:0:144,152:4808,5334:-823.156,-434.073,-390.725,-389.078,0,-343.321	1/1:128:0,127,0:0:0:127,0:4268,0:-383.714,-38.2308,0,-383.714,-38.2308,-383.714	1/1:71:0,71,0:0:0:71,0:2385,0:-214.909,-21.3731,0,-214.909,-21.3731,-214.909	1/2:144:0,54,88:0:0:54,88:1815,3110:-400.314,-253.285,-237.029,-147.025,0,-120.535	1/2:100:0,31,69:0:0:31,69:1032,2399:-278.906,-195.396,-186.064,-83.8481,0,-63.077	1/2:101:0,65,35:0:0:65,35:2212,1231:-279.735,-100.304,-80.7372,-179.525,0,-168.989	1/2:115:0,43,69:0:0:43,69:1427,2378:-308.597,-193.159,-180.215,-115.436,0,-94.6652	1/1:120:0,118,0:0:0:118,0:4065,0:-365.743,-35.5215,0,-365.743,-35.5215,-365.743	1/2:109:0,53,53:0:0:53,53:1809,1884:-300.357,-153.571,-137.616,-146.821,0,-130.867	1/2:77:0,39,37:0:0:39,37:1287,1276:-207.79,-103.746,-92.006,-104.128,0,-92.9902	1/1:117:0,113,0:0:0:113,0:3862,0:-347.483,-34.0164,0,-347.483,-34.0164,-347.483	1/1:69:0,68,0:0:0:68,0:2321,0:-208.901,-20.47,0,-208.901,-20.47,-208.901	1/1:86:0,86,0:0:0:86,0:2915,0:-262.591,-25.8886,0,-262.591,-25.8886,-262.591	1/2:55:0,21,31:0:0:21,31:684,1067:-141.889,-86.6776,-80.356,-55.2202,0,-45.8883	1/1:40:0,39,0:0:0:39,0:1301,0:-117.169,-11.7402,0,-117.169,-11.7402,-117.169	1/2:52:0,32,20:0:0:32,20:1060,715:-144.375,-58.657,-49.0241,-86.0657,0,-80.0451	1/2:330:0,166,163:0:0:166,163:5603,5710:-918.705,-464.601,-414.63,-454.098,0,-405.03	1/1:167:0,165,0:0:0:165,0:5619,0:-505.557,-49.67,0,-505.557,-49.67,-505.557	1/2:149:0,50,98:0:0:50,98:1686,3407:-413.609,-276.98,-261.928,-136.624,0,-107.123	1/2:148:0,80,68:0:0:80,68:2684,2361:-409.311,-191.925,-167.842,-217.381,0,-196.911	1/2:58:0,26,31:0:0:26,31:880,1087:-159.866,-88.5251,-80.6983,-71.4012,0,-62.0692	1/1:72:0,71,0:0:0:71,0:2446,0:-220.166,-21.3731,0,-220.166,-21.3731,-220.166	1/2:336:0,163,171:0:0:163,171:5541,5904:-929.036,-479.62,-430.552,-449.394,0,-397.917	1/1:282:0,279,0:0:0:279,0:9461,0:-851.23,-83.9874,0,-851.23,-83.9874,-851.23	1/1:24:0,24,0:0:0:24,0:828,0:-74.8349,-7.22472,0,-74.8349,-7.22472,-74.8349	1/1:374:0,371,0:0:0:371,0:12599,0:-1130.75,-111.682,0,-1130.75,-111.682,-1130.75	1/2:141:0,73,67:0:0:73,67:2384,2316:-380.695,-188.191,-166.216,-192.508,0,-172.339	1/1:136:0,134,0:0:0:134,0:4522,0:-406.724,-40.338,0,-406.724,-40.338,-406.724	1/1:20:0,20,0:0:0:20,0:679,0:-61.4264,-6.0206,0,-61.4264,-6.0206,-61.4264	1/1:39:0,38,0:0:0:38,0:1308,0:-117.726,-11.4391,0,-117.726,-11.4391,-117.726	1/1:25:0,25,0:0:0:25,0:853,0:-77.0828,-7.52575,0,-77.0828,-7.52575,-77.0828	1/1:31:0,31,0:0:0:31,0:1068,0:-96.4269,-9.33193,0,-96.4269,-9.33193,-96.4269	1/1:62:0,61,0:0:0:61,0:1991,0:-179.178,-18.3628,0,-179.178,-18.3628,-179.178	1/2:162:0,86,74:0:0:86,74:2926,2561:-445.429,-208.093,-182.204,-237.32,0,-215.044	1/1:109:0,107,0:0:0:107,0:3613,0:-325.12,-32.2102,0,-325.12,-32.2102,-325.12	1/1:79:0,75,0:0:0:75,0:2515,0:-226.329,-22.5773,0,-226.329,-22.5773,-226.329	1/2:15:0,13,2:0:0:13,2:447,72:-42.5221,-6.23466,-2.32127,-36.6451,0,-36.043	1/2:212:0,105,104:0:0:105,104:3525,3649:-582.509,-296.986,-265.378,-285.545,0,-254.237	1/1:47:0,47,0:0:0:47,0:1579,0:-142.336,-14.1484,0,-142.336,-14.1484,-142.336	1/1:292:0,292,0:0:0:292,0:9890,0:-890.044,-87.9008,0,-890.044,-87.9008,-890.044	1/1:60:0,59,0:0:0:59,0:1987,0:-178.683,-17.7608,0,-178.683,-17.7608,-178.683	1/2:55:0,17,37:0:0:17,37:561,1306:-151.698,-106.346,-101.229,-45.3496,0,-34.2115	1/2:106:0,54,52:0:0:54,52:1837,1816:-296.422,-147.424,-131.169,-148.985,0,-133.332	1/2:132:0,73,59:0:0:73,59:2432,2072:-365.806,-168.988,-147.013,-197.161,0,-179.4	1/1:236:0,234,0:0:0:234,0:7730,0:-695.513,-70.441,0,-695.513,-70.441,-695.513	1/2:93:1,33,59:1:28:33,59:1150,2071:-259.546,-166.325,-158.609,-91.3023,0,-75.7596	1/2:172:0,80,91:0:0:80,91:2737,3146:-477.768,-255.621,-231.538,-222.142,0,-194.749	1/1:171:0,169,0:0:0:169,0:5813,0:-517.483,-50.8741,0,-517.483,-50.8741,-517.483	1/2:23:0,13,10:0:0:13,10:444,360:-65.3961,-29.3742,-25.4608,-36.0155,0,-33.0052	1/1:209:0,207,0:0:0:207,0:6889,0:-619.82,-62.3132,0,-619.82,-62.3132,-619.82	1/2:164:0,88,74:0:0:88,74:2984,2591:-452.712,-210.755,-184.264,-241.901,0,-219.624	1/1:25:0,25,0:0:0:25,0:845,0:-76.361,-7.52575,0,-76.361,-7.52575,-76.361	1/2:232:0,93,135:0:0:93,135:3147,4681:-635.649,-380.523,-352.527,-255.171,0,-214.532	1/1:35:0,35,0:0:0:35,0:1165,0:-105.142,-10.5361,0,-105.142,-10.5361,-105.142	1/2:64:0,32,32:0:0:32,32:1087,1140:-180.844,-92.6954,-83.0625,-87.9905,0,-78.3576	1/2:32:0,17,15:0:0:17,15:573,527:-89.2277,-42.8118,-37.6943,-46.3373,0,-41.8218	1/1:140:0,139,0:0:0:139,0:4649,0:-418.233,-41.8432,0,-418.233,-41.8432,-418.233	1/2:128:0,62,64:0:0:62,64:2135,2236:-355.289,-181.881,-163.217,-173.404,0,-154.138	1/2:28:0,15,12:0:0:15,12:512,428:-76.4644,-34.9224,-30.4069,-41.5668,0,-37.9545	1/1:207:0,204,1:0:0:204,1:6934,36:-621.054,-61.4101,0,-618.117,-59.1764,-617.816	1/2:220:0,92,125:0:0:92,125:3101,4367:-606.519,-355.231,-327.537,-251.286,0,-213.657	1/2:100:0,46,53:0:0:46,53:1539,1852:-275.249,-150.642,-136.795,-124.589,0,-108.634	1/1:110:0,110,0:0:0:110,0:3754,0:-338.071,-33.1133,0,-338.071,-33.1133,-338.071	1/2:237:0,112,124:0:0:112,124:3733,4371:-658.019,-355.888,-322.172,-302.127,0,-264.799	1/2:333:0,102,230:0:0:102,230:3414,8021:-928.779,-652.338,-621.633,-276.436,0,-207.199	1/2:87:0,32,54:0:0:32,54:1062,1888:-239.488,-153.58,-143.947,-85.8874,0,-69.6317	1/1:91:0,91,0:0:0:91,0:3093,0:-278.604,-27.3937,0,-278.604,-27.3937,-278.604	1/2:67:0,39,28:0:0:39,28:1321,979:-186.703,-79.6162,-67.876,-107.07,0,-98.6408	1/2:53:0,23,30:0:0:23,30:752,1031:-144.44,-83.7127,-76.789,-60.7173,0,-51.6864	1/2:103:0,55,46:0:0:55,46:1874,1606:-282.713,-130.677,-114.121,-152.078,0,-138.231	1/2:109:0,61,47:0:0:61,47:2021,1596:-292.954,-129.494,-111.131,-163.515,0,-149.366	1/2:205:0,93,109:0:0:93,109:3155,3808:-565.634,-309.789,-281.793,-255.868,0,-223.055	1/1:216:0,211,0:0:0:211,0:7205,0:-647.915,-63.5173,0,-647.915,-63.5173,-647.915	1/1:268:0,260,0:0:0:260,0:8611,0:-774.765,-78.2678,0,-774.765,-78.2678,-774.765	1/2:143:0,72,70:0:0:72,70:2396,2458:-393.993,-200.111,-178.437,-193.933,0,-172.861	1/2:36:0,16,19:0:0:16,19:523,638:-93.9776,-51.7411,-46.9246,-42.2925,0,-36.5729	1/2:153:0,49,101:0:0:49,101:1667,3530:-422.408,-287.187,-272.436,-135.241,0,-104.836	1/1:248:0,244,1:0:0:244,1:8234,36:-740.828,-73.4513,0,-737.89,-70.4914,-737.589	1/1:258:0,257,0:0:0:257,0:8724,0:-784.821,-77.3647,0,-784.821,-77.3647,-784.821	1/2:60:0,27,33:0:0:27,33:924,1157:-169.146,-94.1487,-86.0209,-74.9952,0,-65.0612	1/2:71:0,38,33:0:0:38,33:1298,1167:-200.381,-95.049,-83.6099,-105.33,0,-95.3958	1/1:60:0,59,0:0:0:59,0:2004,0:-180.211,-17.7608,0,-180.211,-17.7608,-180.211	1/1:138:0,137,0:0:0:137,0:4644,0:-417.904,-41.2411,0,-417.904,-41.2411,-417.904	1/1:17:0,15,0:0:0:15,0:457,0:-41.0721,-4.51545,0,-41.0721,-4.51545,-41.0721	1/2:80:0,36,43:0:0:36,43:1216,1480:-218.744,-120.184,-109.347,-98.5418,0,-85.5975	1/2:69:0,28,41:0:0:28,41:936,1439:-193.238,-117.463,-109.034,-76.116,0,-63.7738	1/1:120:0,118,0:0:0:118,0:3994,0:-359.334,-35.5215,0,-359.334,-35.5215,-359.334	1/2:224:1,99,122:1:36:99,122:3377,4246:-616.077,-342.371,-315.507,-271.122,0,-237.334	1/2:72:0,22,49:0:0:22,49:728,1704:-197.412,-138.54,-131.917,-58.867,0,-44.1165	1/1:180:0,176,0:0:0:176,0:5950,0:-535.335,-52.9813,0,-535.335,-52.9813,-535.335	1/1:105:0,103,0:0:0:103,0:3523,0:-316.996,-31.0061,0,-316.996,-31.0061,-316.996
chr11	3803135	.	C	T	170958	PASS	AB=0.539079;ABP=83.9661;AC=138;AF=0.734043;AN=188;AO=8204;CIGAR=1X;DP=11031;DPB=11031;DPRA=0;EPP=17817.8;EPPR=6055.15;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.985;MQMR=59.9515;NS=94;NUMALT=1;ODDS=2.52078;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=293663;QR=100530;RO=2823;RPL=0;RPP=17817.8;RPPR=6063.79;RPR=8204;RUN=1;SAF=8204;SAP=17817.8;SAR=0;SRF=2822;SRP=6124.39;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:40:20,20:20:716:20:720:-52.1468,0,-52.7265	0/1:170:50,120:50:1792:120:4259:-332.311,0,-110.197	0/1:131:59,72:59:2095:72:2572:-192.295,0,-149.384	0/1:316:140,176:140:4991:176:6308:-472.686,0,-354.214	1/1:124:0,124:0:0:124:4452:-400.849,-37.3277,0	1/1:66:0,66:0:0:66:2349:-211.668,-19.868,0	0/1:201:87,114:87:3099:114:4088:-307.597,0,-218.631	0/1:138:46,92:46:1635:92:3300:-255.676,0,-105.896	0/1:168:94,73:94:3342:73:2616:-185.204,0,-250.515	0/1:140:70,70:70:2503:70:2501:-183.197,0,-183.373	1/1:36:1,35:1:36:35:1244:-108.666,-7.23881,0	0/1:69:37,32:37:1312:32:1144:-82.4984,0,-97.6106	0/1:92:57,35:57:2022:35:1260:-86.0107,0,-154.557	1/1:51:0,51:0:0:51:1817:-163.809,-15.3525,0	1/1:52:0,52:0:0:52:1868:-168.399,-15.6536,0	1/1:54:0,54:0:0:54:1925:-173.525,-16.2556,0	0/1:56:26,30:26:928:30:1080:-80.6556,0,-66.9806	1/1:61:0,61:0:0:61:2183:-196.735,-18.3628,0	0/1:39:28,11:28:978:11:396:-24.2426,0,-76.591	0/1:328:189,139:189:6759:139:4988:-350.326,0,-509.56	1/1:221:0,221:0:0:221:7927:-713.447,-66.5276,0	0/1:134:90,44:90:3197:44:1580:-102.154,0,-247.615	0/1:124:55,68:55:1964:68:2436:-182.107,0,-139.649	0/1:170:57,113:57:2031:113:4052:-313.692,0,-131.877	1/1:101:0,101:0:0:101:3624:-326.365,-30.404,0	0/1:330:116,214:116:4122:214:7653:-589.465,0,-271.826	1/1:308:0,308:0:0:308:10992:-989.177,-92.7172,0	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	1/1:270:0,270:0:0:270:9659:-869.263,-81.2781,0	0/1:149:47,101:47:1659:101:3632:-282.171,0,-104.685	1/1:187:0,187:0:0:187:6712:-603.86,-56.2926,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:16:0,16:0:0:16:572:-51.8134,-4.81648,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:4:0,4:0:0:4:140:-12.9446,-1.20412,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:184:79,105:79:2806:105:3768:-283.929,0,-197.389	1/1:157:1,156:1:36:156:5576:-498.366,-43.6634,0	1/1:50:0,50:0:0:50:1800:-162.282,-15.0515,0	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/1:199:103,96:103:3688:96:3432:-249.189,0,-272.218	1/1:29:0,29:0:0:29:1040:-93.9144,-8.72987,0	1/1:218:2,216:2:72:216:7760:-691.591,-58.7878,0	1/1:87:0,87:0:0:87:3120:-281.026,-26.1896,0	0/1:74:32,42:32:1109:42:1504:-113.378,0,-77.8383	0/1:131:54,77:54:1940:77:2756:-208.847,0,-135.25	0/1:131:62,69:62:2190:69:2472:-183.299,0,-157.93	1/1:250:1,249:1:36:249:8901:-797.477,-71.6592,0	0/1:166:83,83:83:2972:83:2940:-214.86,0,-217.742	0/1:132:63,69:63:2231:69:2476:-183.357,0,-161.317	1/1:250:1,249:1:36:249:8885:-796.037,-71.6592,0	0/1:12:4,8:4:136:8:288:-22.655,0,-8.96318	1/1:151:0,151:0:0:151:5408:-486.85,-45.4555,0	0/1:71:31,40:31:1112:40:1436:-108.165,0,-79.0182	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:168:74,94:74:2633:94:3356:-251.684,0,-186.643	1/1:79:2,77:2:64:77:2764:-242.922,-17.7027,0	0/1:4:1,3:1:32:3:108:-8.87105,0,-1.99519	0/1:21:9,12:9:324:12:417:-31.5386,0,-23.1842	1/1:63:0,63:0:0:63:2256:-203.303,-18.9649,0	0/1:98:45,53:45:1607:53:1904:-142.137,0,-115.418	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:335:2,332:2:72:332:11866:-1060.96,-94.0671,0	0/1:186:67,119:67:2369:119:4234:-325.249,0,-156.84	0/1:94:29,65:29:1018:65:2328:-181.483,0,-63.6336	1/1:82:0,82:0:0:82:2921:-263.124,-24.6845,0	0/1:206:99,107:99:3527:107:3832:-283.064,0,-255.626	0/1:140:88,52:88:3131:52:1872:-126.615,0,-239.873	0/1:31:20,11:20:712:11:381:-25.2887,0,-55.0747	1/1:125:0,125:0:0:125:4480:-403.369,-37.6288,0	0/1:77:39,38:39:1400:38:1364:-99.8814,0,-103.12	0/1:19:6,13:6:216:13:468:-36.7401,0,-14.0709	0/1:140:70,70:70:2512:70:2508:-183.828,0,-184.188	0/1:88:33,55:33:1188:55:1968:-150.904,0,-80.738	0/1:180:71,109:71:2520:109:3887:-295.838,0,-172.868	1/1:247:1,246:1:36:246:8840:-791.983,-70.7561,0	1/1:119:0,119:0:0:119:4229:-380.791,-35.8226,0	0/1:121:45,76:45:1616:76:2716:-208.259,0,-109.305	0/1:18:5,13:5:180:13:464:-36.679,0,-11.1335	0/1:169:77,92:77:2729:92:3308:-247.063,0,-194.978	1/1:154:0,154:0:0:154:5520:-496.925,-46.3586,0	1/1:252:0,252:0:0:252:9016:-811.23,-75.8596,0	0/1:84:40,44:40:1428:44:1576:-116.845,0,-103.531	0/1:64:29,35:29:1044:35:1250:-93.5388,0,-75.0089	1/1:113:0,113:0:0:113:4060:-365.586,-34.0164,0	1/1:144:2,142:2:72:142:5094:-451.765,-36.5116,0	1/1:60:0,60:0:0:60:2135:-192.417,-18.0618,0	0/1:87:47,40:47:1668:40:1436:-103.348,0,-124.218	1/1:71:0,71:0:0:71:2537:-228.58,-21.3731,0	1/1:30:0,30:0:0:30:1080:-97.5132,-9.0309,0	0/1:90:46,44:46:1652:44:1561:-113.687,0,-121.876	0/1:112:83,29:83:2947:29:1044:-60.5594,0,-231.75	1/1:113:0,113:0:0:113:4048:-364.507,-34.0164,0	1/1:121:0,121:0:0:121:4348:-391.493,-36.4246,0
chr11	3803195	.	T	G	36902.3	PASS	AB=0.329524;ABP=2190.05;AC=50;AF=0.265957;AN=188;AO=2860;CIGAR=1X;DP=17672;DPB=17672;DPRA=0.912919;EPP=6213.42;EPPR=32153.8;GTI=5;LEN=1;MEANALT=1.07407;MQM=59.978;MQMR=59.9958;NS=94;NUMALT=1;ODDS=5.15222;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=101200;QR=526805;RO=14806;RPL=5;RPP=6170.07;RPPR=315.634;RPR=2855;RUN=1;SAF=5;SAP=6170.07;SAR=2855;SRF=8133;SRP=315.634;SRR=6673;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:99:79,20:79:2817:20:720:-35.3268,0,-223.966	0/1:212:155,57:155:5503:57:2033:-119.423,0,-431.58	0/1:221:147,73:147:5221:73:2611:-168.652,0,-403.442	0/1:332:238,93:238:8485:93:3315:-198.568,0,-663.653	0/0:150:150,0:150:5320:0:0:0,-45.1545,-478.938	0/0:106:106,0:106:3773:0:0:0,-31.9092,-339.769	0/1:246:150,96:150:5342:96:3379:-230.271,0,-406.862	0/1:230:161,69:161:5720:69:2472:-153.497,0,-445.683	0/1:174:119,55:119:4202:55:1972:-125.376,0,-325.984	0/1:146:107,39:107:3788:39:1395:-81.898,0,-297.167	0/0:152:152,0:152:5422:0:0:0,-45.7566,-488.111	0/1:155:108,47:108:3864:47:1666:-103.566,0,-301.296	0/1:154:103,51:103:3671:51:1794:-115.38,0,-284.233	0/0:154:154,0:154:5481:0:0:0,-46.3586,-493.419	0/0:161:159,2:159:5639:2:72:0,-41.6291,-500.797	0/0:140:140,0:140:4986:0:0:0,-42.1442,-448.887	0/1:123:65,58:65:2336:58:2029:-145.747,0,-173.473	0/0:104:104,0:104:3693:0:0:0,-31.3071,-332.571	0/1:64:41,23:41:1443:23:800:-53.0498,0,-110.899	0/1:378:250,128:250:8898:128:4571:-297.767,0,-687.018	0/0:332:332,0:332:11846:0:0:0,-99.942,-1066	0/1:166:72,94:72:2555:94:3336:-250.488,0,-180.23	0/1:174:137,36:137:4889:36:1255:-60.8107,0,-387.72	0/1:206:161,45:161:5690:45:1584:-80.8355,0,-450.211	0/0:171:171,0:171:6112:0:0:0,-51.4761,-550.182	0/1:439:317,122:317:11271:122:4349:-259.433,0,-882.128	0/0:703:703,0:703:25042:0:0:0,-211.624,-2253.1	0/0:71:71,0:71:2519:0:0:0,-21.3731,-226.962	0/0:483:483,0:483:17186:0:0:0,-145.397,-1546.39	0/1:216:155,61:155:5535:61:2176:-131.084,0,-433.254	0/0:345:344,0:344:12179:0:0:0,-103.554,-1095.71	0/0:29:29,0:29:1031:0:0:0,-8.72987,-93.1026	0/0:36:36,0:36:1292:0:0:0,-10.8371,-116.584	0/0:15:15,0:15:527:0:0:0,-4.51545,-47.7602	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/1:330:215,115:215:7629:115:4037:-264.178,0,-587.315	0/0:232:232,0:232:8248:0:0:0,-69.839,-742.334	0/0:139:138,0:138:4908:0:0:0,-41.5421,-441.512	0/1:12:4,8:4:144:8:270:-21.0153,0,-9.70126	0/1:225:147,78:147:5228:78:2792:-183.788,0,-402.928	0/0:64:64,0:64:2283:0:0:0,-19.2659,-205.731	0/0:356:356,0:356:12709:0:0:0,-107.167,-1143.63	0/0:169:169,0:169:6015:0:0:0,-50.8741,-541.456	0/1:111:77,34:77:2747:34:1194:-74.3494,0,-214.058	0/1:170:134,36:134:4787:36:1268:-63.2449,0,-379.812	0/1:161:113,48:113:4029:48:1720:-106.608,0,-314.332	0/0:362:362,0:362:12849:0:0:0,-108.973,-1156.23	0/1:181:129,52:129:4603:52:1851:-112.383,0,-359.949	0/1:206:138,68:138:4910:68:2417:-155.773,0,-380.041	0/0:336:335,1:335:11850:1:36:0,-97.5478,-1062.77	0/1:29:23,6:23:807:6:207:-10.237,0,-64.2193	0/0:270:270,0:270:9613:0:0:0,-81.2781,-865.124	0/1:99:63,36:63:2251:36:1251:-83.0865,0,-173.051	0/0:40:40,0:40:1402:0:0:0,-12.0412,-126.473	0/1:218:160,58:160:5701:58:2051:-119.222,0,-447.585	0/0:137:136,1:136:4832:1:36:0,-37.6428,-431.438	0/1:13:8,5:8:284:5:180:-12.6387,0,-21.99	0/1:20:14,6:14:504:6:212:-13.4042,0,-39.6775	0/0:185:185,0:185:6622:0:0:0,-55.6905,-596.058	0/1:215:124,91:124:4417:91:3222:-225.478,0,-332.981	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:452:452,0:452:16131:0:0:0,-136.066,-1451.47	0/1:262:177,85:177:6304:85:2980:-189.562,0,-488.587	0/1:139:92,47:92:3295:47:1652:-107.12,0,-254.925	0/0:162:162,0:162:5739:0:0:0,-48.7669,-516.545	0/1:261:177,84:177:6303:84:2978:-189.683,0,-488.795	0/1:205:112,93:112:3990:93:3308:-236.227,0,-297.579	0/1:89:67,22:67:2391:22:775:-43.2795,0,-188.655	0/0:176:176,0:176:6291:0:0:0,-52.9813,-566.284	0/1:119:73,46:73:2612:46:1611:-109.453,0,-199.505	0/1:46:21,25:21:752:25:892:-66.7523,0,-54.1589	0/1:192:117,75:117:4191:75:2613:-177.618,0,-319.573	0/1:140:98,42:98:3490:42:1489:-92.1583,0,-272.167	0/1:364:226,137:226:8042:137:4818:-324.143,0,-614.172	0/0:403:403,0:403:14271:0:0:0,-121.315,-1284.16	0/0:240:240,0:240:8552:0:0:0,-72.2472,-769.679	0/1:158:114,44:114:4042:44:1562:-93.3074,0,-316.408	0/1:21:16,5:16:568:5:180:-10.2304,0,-45.1302	0/1:205:151,54:151:5394:54:1944:-113.525,0,-423.88	0/0:269:269,0:269:9569:0:0:0,-80.9771,-861.17	0/0:458:457,1:457:16278:1:36:0,-134.273,-1461.1	0/1:126:74,52:74:2631:52:1827:-126.778,0,-199.108	0/1:116:73,43:73:2595:43:1494:-99.8294,0,-198.879	0/0:176:176,0:176:6262:0:0:0,-52.9813,-563.678	0/0:319:319,0:319:11325:0:0:0,-96.0286,-1019.14	0/0:81:81,0:81:2891:0:0:0,-24.3834,-260.426	0/1:125:78,47:78:2758:47:1658:-111.877,0,-210.834	0/0:141:141,0:141:5034:0:0:0,-42.4452,-453.206	0/0:137:137,0:137:4863:0:0:0,-41.2411,-437.827	0/1:239:149,90:149:5262:90:3175:-214.028,0,-401.775	0/1:132:76,56:76:2716:56:1935:-134.685,0,-204.948	0/0:207:207,0:207:7337:0:0:0,-62.3132,-660.382	0/0:268:268,0:268:9520:0:0:0,-80.676,-856.763
chr11	3878743	.	A	G	216324	PASS	AB=0.493304;ABP=5.88905;AC=138;AF=0.734043;AN=188;AO=10502;CIGAR=1X;DP=14258;DPB=14258;DPRA=0;EPP=22807.8;EPPR=8146.03;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.978;MQMR=59.9851;NS=94;NUMALT=1;ODDS=8.28435;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=371004;QR=132634;RO=3750;RPL=3;RPP=22781.8;RPPR=8050.77;RPR=10499;RUN=1;SAF=3;SAP=22781.8;SAR=10499;SRF=11;SRP=8050.77;SRR=3739;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:53:22,31:22:792:31:1090:-82.454,0,-55.6511	0/1:179:90,89:90:3180:89:3163:-231.012,0,-232.54	0/1:132:61,71:61:2163:71:2488:-184.434,0,-155.201	0/1:427:213,214:213:7539:214:7537:-549.837,0,-550.014	1/1:122:0,122:0:0:122:4306:-387.719,-36.7257,0	1/1:113:0,113:0:0:113:4019:-361.9,-34.0164,0	0/1:217:115,102:115:4055:102:3610:-259.782,0,-299.817	0/1:173:97,76:97:3459:76:2619:-183.874,0,-259.445	0/1:165:84,81:84:2944:81:2835:-205.72,0,-215.523	0/1:138:56,82:56:1977:82:2891:-218.884,0,-136.661	1/1:109:0,109:0:0:109:3824:-344.359,-32.8123,0	0/1:110:47,63:47:1650:63:2185:-163.8,0,-115.673	0/1:127:62,65:62:2150:65:2298:-168.849,0,-155.534	1/1:118:0,118:0:0:118:4095:-368.743,-35.5215,0	1/1:104:1,103:1:36:103:3650:-325.108,-27.7088,0	1/1:83:0,83:0:0:83:2949:-265.643,-24.9855,0	0/1:78:46,32:46:1620:32:1118:-77.4457,0,-122.606	1/1:87:0,87:0:0:87:3070:-276.531,-26.1896,0	0/1:76:34,42:34:1194:42:1487:-111.245,0,-84.8855	0/1:314:147,167:147:5212:167:5951:-441.17,0,-374.696	1/1:256:0,256:0:0:256:8998:-809.811,-77.0637,0	0/1:134:78,56:78:2770:56:1984:-138.494,0,-209.201	0/1:150:72,78:72:2553:78:2796:-206.725,0,-184.865	0/1:193:56,137:56:1994:137:4876:-380.895,0,-121.634	1/1:110:0,110:0:0:110:3884:-349.757,-33.1133,0	0/1:528:292,236:292:10342:236:8370:-594.356,0,-771.769	1/1:361:1,359:1:36:359:12688:-1138.18,-105.062,0	1/1:36:0,36:0:0:36:1258:-113.521,-10.8371,0	1/1:589:0,589:0:0:589:20923:-1882.56,-177.307,0	0/1:174:70,104:70:2489:104:3681:-279.114,0,-171.883	1/1:199:0,198:0:0:198:7022:-631.762,-59.6039,0	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:53:0,53:0:0:53:1881:-169.567,-15.9546,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:16:0,16:0:0:16:560:-50.7287,-4.81648,0	1/1:17:0,17:0:0:17:595:-53.8767,-5.11751,0	0/1:287:124,162:124:4424:162:5696:-426.309,0,-311.879	1/1:211:0,211:0:0:211:7461:-671.433,-63.5173,0	1/1:103:0,103:0:0:103:3641:-327.895,-31.0061,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:271:143,128:143:5080:128:4536:-326.828,0,-375.767	1/1:56:0,56:0:0:56:1987:-179.104,-16.8577,0	1/1:226:0,226:0:0:226:7992:-719.251,-68.0328,0	1/1:123:0,123:0:0:123:4360:-392.576,-37.0267,0	0/1:76:37,39:37:1319:39:1388:-102.341,0,-96.1329	0/1:138:78,60:78:2779:60:2104:-148.084,0,-208.809	0/1:186:92,94:92:3238:94:3317:-242.756,0,-235.65	1/1:311:0,311:0:0:311:11037:-993.229,-93.6203,0	0/1:95:48,47:48:1716:47:1663:-121.359,0,-126.127	0/1:137:73,64:73:2603:64:2288:-164.941,0,-193.277	1/1:305:0,305:0:0:305:10789:-970.924,-91.8142,0	0/1:27:19,8:19:680:8:288:-18.1396,0,-53.3887	1/1:164:0,164:0:0:164:5833:-525.085,-49.3689,0	0/1:115:61,54:61:2153:54:1871:-134.044,0,-159.417	1/1:43:0,43:0:0:43:1522:-137.272,-12.9443,0	0/1:204:110,94:110:3882:94:3244:-230.768,0,-288.166	1/1:77:0,77:0:0:77:2715:-244.591,-23.1793,0	0/1:21:12,9:12:415:9:315:-22.3656,0,-31.3587	0/1:39:12,27:12:428:27:964:-75.3367,0,-27.1177	1/1:120:0,120:0:0:120:4238:-381.573,-36.1236,0	0/1:151:77,74:77:2720:74:2568:-185.913,0,-199.587	0/1:18:11,7:11:371:7:239:-16.4242,0,-28.2966	1/1:364:2,361:2:72:361:12800:-1145.04,-102.704,0	0/1:227:123,104:123:4390:104:3706:-265.408,0,-326.939	0/1:94:40,54:40:1415:54:1920:-144.78,0,-99.3498	1/1:145:0,145:0:0:145:5173:-465.71,-43.6494,0	0/1:263:141,122:141:4949:122:4344:-311.967,0,-366.395	0/1:102:70,32:70:2500:32:1139:-72.1133,0,-194.548	0/1:41:25,16:25:892:16:568:-39.1096,0,-68.2575	1/1:95:0,95:0:0:95:3346:-301.358,-28.5979,0	0/1:102:50,52:50:1756:52:1800:-131.572,0,-127.616	0/1:27:17,10:17:604:10:345:-23.253,0,-46.5628	0/1:190:98,92:98:3443:92:3222:-233.008,0,-252.887	0/1:100:52,48:52:1819:48:1691:-122.372,0,-133.885	0/1:273:133,140:133:4659:140:4934:-362.031,0,-337.024	1/1:311:0,311:0:0:311:11054:-994.754,-93.6203,0	1/1:170:1,169:1:36:169:5949:-531.922,-47.5768,0	0/1:148:83,65:83:2955:65:2315:-163.787,0,-221.632	0/1:16:12,4:12:428:4:144:-8.49714,0,-34.0423	0/1:189:102,87:102:3603:87:3052:-218.014,0,-267.582	1/1:132:0,131:0:0:131:4623:-415.993,-39.4349,0	1/1:447:0,447:0:0:447:15826:-1424.04,-134.56,0	0/1:139:69,70:69:2436:70:2471:-180.801,0,-177.651	1/1:100:0,100:0:0:100:3552:-319.891,-30.103,0	1/1:142:0,142:0:0:142:4975:-447.904,-42.7463,0	1/1:199:0,199:0:0:199:6994:-629.535,-59.905,0	1/1:77:0,77:0:0:77:2724:-245.405,-23.1793,0	0/1:105:51,54:51:1802:54:1888:-138.588,0,-130.852	1/1:95:0,95:0:0:95:3333:-300.187,-28.5979,0	1/1:75:0,75:0:0:75:2643:-238.118,-22.5773,0	0/1:131:64,67:64:2218:67:2365:-173.673,0,-160.448	0/1:108:72,36:72:2550:36:1279:-82.9012,0,-197.239	1/1:238:0,238:0:0:238:8357:-752.148,-71.6451,0	1/1:146:0,145:0:0:145:5067:-455.97,-43.6494,0
chr11	4552277	.	AAC	GAG,AAG	628777	PASS	AB=0.507606,0.489858;ABP=8.75811,13.2286;AC=140,48;AF=0.744681,0.255319;AN=188;AO=17744,5620;CIGAR=1X1M1X,2M1X;DP=23438;DPB=23444;DPRA=0,1.15057;EPP=38429.5,12180.6;EPPR=5.18177;GTI=0;LEN=3,1;MEANALT=2.28723,2.69643;MQM=56.6185,59.8495;MQMR=60;NS=94;NUMALT=2;ODDS=5.88782;PAIRED=0,0;PAIREDR=0;PAO=18,0;PQA=624,0;PQR=0;PRO=0;QA=619589,199473;QR=25;RO=1;RPL=9563,3425;RPP=236.743,587.569;RPPR=5.18177;RPR=8181,2195;RUN=1,1;SAF=9551,3422;SAP=228.695,581.88;SAR=8193,2198;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:165:0,165,0:0:0:165,0:5754,0:-516.424,-49.67,0,-516.424,-49.67,-516.424	1/2:432:0,193,239:0:0:193,239:6705,8511:-1238.34,-693.996,-635.898,-544.691,0,-472.745	1/1:458:0,455,0:0:0:455,0:15855,0:-1422.1,-136.969,0,-1422.1,-136.969,-1422.1	1/2:540:0,264,275:0:0:264,275:9179,9744:-1538.55,-793.9,-714.428,-744.794,0,-662.01	1/1:233:0,232,0:0:0:232,0:8087,0:-726.536,-69.839,0,-726.536,-69.839,-726.536	1/1:136:0,135,0:0:0:135,0:4785,0:-429.642,-40.6391,0,-429.642,-40.6391,-429.642	1/1:240:0,237,0:0:0:237,0:8237,0:-740.638,-71.3441,0,-740.638,-71.3441,-740.638	1/1:527:0,521,2:0:0:521,2:18069,72:-1619.15,-156.837,0,-1613.28,-150.956,-1612.68	1/2:241:1,128,112:1:25:128,112:4436,4008:-684.506,-324.901,-288.317,-358.023,0,-326.256	1/1:246:0,245,0:0:0:245,0:8593,0:-771.615,-73.7524,0,-771.615,-73.7524,-771.615	1/1:153:0,153,0:0:0:153,0:5320,0:-478.069,-46.0576,0,-478.069,-46.0576,-478.069	1/2:222:0,128,94:0:0:128,94:4468,3341:-634.79,-272.574,-234.042,-362.568,0,-334.271	1/2:239:0,123,116:0:0:123,116:4362,4150:-692.824,-338.748,-301.721,-354.432,0,-319.513	1/1:202:0,199,0:0:0:199,0:6906,0:-618.989,-59.905,0,-618.989,-59.905,-618.989	1/1:210:0,208,0:0:0:208,0:7324,0:-657.878,-62.6142,0,-657.878,-62.6142,-657.878	1/1:178:0,176,0:0:0:176,0:6189,0:-556.283,-52.9813,0,-556.283,-52.9813,-556.283	1/2:169:0,79,90:0:0:79,90:2793,3197:-488.049,-260.844,-237.063,-227.559,0,-200.466	1/2:148:0,78,70:0:0:78,70:2759,2507:-428.558,-204.793,-181.313,-224.12,0,-203.048	1/2:94:0,59,34:0:0:59,34:2066,1213:-266.508,-98.8719,-81.1111,-167.631,0,-157.396	1/2:530:0,265,264:0:0:265,264:9291,9361:-1517.8,-762.616,-682.844,-755.174,0,-675.703	1/1:451:0,449,0:0:0:449,0:15708,0:-1410.37,-135.162,0,-1410.37,-135.162,-1410.37	1/2:171:0,61,109:0:0:61,109:2076,3854:-481.218,-313.883,-295.52,-167.32,0,-134.507	1/2:244:0,138,105:0:0:138,105:4865,3752:-701.491,-305.888,-264.346,-395.599,0,-363.991	1/2:218:0,124,93:0:0:124,93:4343,3311:-622.554,-269.688,-232.361,-352.859,0,-324.863	1/1:230:0,228,0:0:0:228,0:7973,0:-715.853,-68.6348,0,-715.853,-68.6348,-715.853	1/2:675:0,331,343:0:0:331,343:11529,12184:-1929.67,-992.819,-893.178,-936.93,0,-833.677	1/1:583:0,582,0:0:0:582,0:20414,0:-1833.53,-175.199,0,-1833.53,-175.199,-1833.53	1/1:118:0,118,0:0:0:118,0:4155,0:-373.718,-35.5215,0,-373.718,-35.5215,-373.718	1/1:564:0,561,2:0:0:561,2:19667,72:-1767.42,-168.878,0,-1761.55,-162.987,-1760.95	1/2:362:0,189,173:0:0:189,173:6586,6130:-1033.93,-499.334,-442.439,-534.59,0,-482.512	1/1:283:0,282,0:0:0:282,0:9909,0:-890.562,-84.8905,0,-890.562,-84.8905,-890.562	1/2:24:0,13,11:0:0:13,11:423,392:-66.4065,-32.3087,-28.3953,-34.4397,0,-31.1284	1/1:55:0,55,0:0:0:55,0:1919,0:-172.652,-16.5567,0,-172.652,-16.5567,-172.652	1/1:14:0,14,0:0:0:14,0:489,0:-44.2461,-4.21442,0,-44.2461,-4.21442,-44.2461	1/1:13:0,13,0:0:0:13,0:460,0:-40.784,-3.91339,0,-40.784,-3.91339,-40.784	1/1:29:0,29,0:0:0:29,0:995,0:-89.659,-8.72987,0,-89.659,-8.72987,-89.659	1/2:462:0,227,235:0:0:227,235:7978,8296:-1324.58,-675.9,-607.566,-649.03,0,-578.288	1/2:303:0,168,134:0:0:168,134:5895,4750:-866.308,-387.002,-336.429,-479.378,0,-439.04	1/1:149:0,149,0:0:0:149,0:5188,0:-465.977,-44.8535,0,-465.977,-44.8535,-465.977	1/2:6:0,3,3:0:0:3,3:105,104:-17.3327,-8.79971,-7.89662,-8.88096,0,-7.97787	1/1:360:0,359,0:0:0:359,0:12542,0:-1127.01,-108.07,0,-1127.01,-108.07,-1127.01	1/1:92:0,91,0:0:0:91,0:3206,0:-287.014,-27.3937,0,-287.014,-27.3937,-287.014	1/1:419:0,418,0:0:0:418,0:14519,0:-1302.64,-125.831,0,-1302.64,-125.831,-1302.64	1/1:198:0,198,0:0:0:198,0:6904,0:-620.46,-59.6039,0,-620.46,-59.6039,-620.46	1/2:148:0,69,78:0:0:69,78:2389,2744:-416.776,-223.395,-202.624,-193.409,0,-169.929	1/2:157:0,80,75:0:0:80,75:2793,2684:-445.984,-218.947,-194.865,-227.109,0,-204.532	1/2:351:0,174,177:0:0:174,177:6011,6268:-997.317,-510.916,-458.537,-486.75,0,-433.468	1/1:553:0,546,4:0:0:546,4:19011,144:-1708.65,-164.362,0,-1696.9,-152.579,-1695.69	1/2:245:0,122,121:0:0:122,121:4263,4278:-694.605,-348.455,-311.729,-346.259,0,-309.834	1/2:357:0,178,179:0:0:178,179:6181,6322:-1017.3,-515.165,-461.582,-502.482,0,-448.597	1/1:251:0,251,0:0:0:251,0:8737,0:-785.522,-75.5585,0,-785.522,-75.5585,-785.522	1/2:23:0,12,11:0:0:12,11:395,384:-63.4239,-31.5833,-27.971,-32.1797,0,-28.8683	1/1:363:0,361,0:0:0:361,0:12715,0:-1140.6,-108.672,0,-1140.6,-108.672,-1140.6	1/2:105:0,44,61:0:0:44,61:1552,2157:-302.347,-176.002,-162.757,-126.698,0,-108.335	1/2:17:0,9,8:0:0:9,8:324,288:-50.2503,-23.8463,-21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chr11	6745011	.	A	G	104884	PASS	AB=0.531117;ABP=100.177;AC=93;AF=0.494681;AN=188;AO=6136;CIGAR=1X;DP=11560;DPB=11560;DPRA=17.7465;EPP=13327.2;EPPR=11770.2;GTI=1;LEN=1;MEANALT=1.04301;MQM=47.9051;MQMR=59.9504;NS=94;NUMALT=1;ODDS=112.088;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=219490;QR=194233;RO=5419;RPL=6136;RPP=13327.2;RPPR=11770.2;RPR=0;RUN=1;SAF=6136;SAP=13327.2;SAR=0;SRF=5419;SRP=11770.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:24:17,7:17:612:7:240:-14.5914,0,-48.1887	0/1:188:62,126:62:2217:126:4501:-345.079,0,-143.199	0/1:119:63,56:63:2256:56:1993:-142.431,0,-167.48	0/1:176:62,114:62:2224:114:4080:-311.784,0,-147.42	0/1:81:51,28:51:1828:28:1004:-64.8203,0,-140.732	0/1:85:51,34:51:1821:34:1220:-83.8148,0,-138.582	0/1:120:80,40:80:2865:40:1417:-89.6428,0,-221.962	0/1:294:179,115:179:6420:115:4120:-279.258,0,-489.335	0/1:141:33,108:33:1176:108:3868:-303.377,0,-63.7025	0/1:155:88,67:88:3130:67:2381:-165.901,0,-235.264	0/1:34:22,12:22:788:12:428:-28.3664,0,-61.0098	0/1:81:32,49:32:1152:49:1756:-132.872,0,-79.5961	0/1:63:22,41:22:792:41:1452:-110.774,0,-52.6183	0/1:51:25,26:25:900:26:936:-68.6232,0,-65.9685	0/1:64:49,15:49:1764:15:540:-29.2487,0,-139.778	0/1:59:42,17:42:1493:17:604:-36.5965,0,-116.902	0/1:60:42,18:42:1512:18:648:-40.1852,0,-118.277	0/1:50:15,35:15:525:35:1260:-96.8087,0,-32.5266	0/1:17:5,12:5:180:12:428:-32.8131,0,-11.4346	0/1:173:63,110:63:2268:110:3940:-300.316,0,-152.304	0/1:211:136,75:136:4846:75:2681:-175.983,0,-372.766	0/1:189:55,133:55:1972:133:4749:-367.269,0,-120.949	0/1:227:63,164:63:2260:164:5869:-454.537,0,-135.329	0/1:165:69,96:69:2484:96:3433:-256.723,0,-174.143	0/1:94:63,31:63:2260:31:1116:-71.6464,0,-175.366	0/1:556:169,387:169:6044:387:13823:-1066.88,0,-376.417	0/1:245:159,86:159:5712:86:3080:-201.404,0,-440.42	0/1:43:23,20:23:828:20:720:-51.5993,0,-61.8998	0/1:335:248,87:248:8859:87:3104:-176.502,0,-696.444	0/1:180:61,119:61:2188:119:4257:-325.938,0,-143	0/1:234:147,87:147:5269:87:3132:-208.766,0,-403.902	0/1:8:1,7:1:36:7:248:-20.1105,0,-1.19003	0/1:8:4,4:4:144:4:144:-10.8135,0,-10.9054	0/1:16:7,9:7:252:9:320:-24.1356,0,-18.2125	0/1:13:10,3:10:360:3:108:-6.09223,0,-28.8309	0/0:7:7,0:7:252:0:0:0,-2.10721,-22.7984	0/1:226:71,155:71:2556:155:5568:-428.98,0,-162.257	0/1:378:101,277:101:3632:277:9864:-766.49,0,-213.294	0/1:39:27,12:27:968:12:432:-27.2103,0,-75.6825	0/1:10:4,6:4:144:6:216:-16.6436,0,-10.3033	0/1:116:65,51:65:2340:51:1828:-128.765,0,-175.936	0/1:18:11,7:11:396:7:252:-17.4514,0,-30.5642	0/1:211:123,88:123:4416:88:3156:-217.398,0,-334.093	0/1:58:43,15:43:1544:15:536:-30.7906,0,-121.793	0/1:62:46,16:46:1652:16:576:-33.1509,0,-130.305	0/1:137:31,106:31:1116:106:3808:-299.291,0,-59.5106	0/1:127:58,69:58:2076:69:2480:-183.494,0,-148.88	0/1:260:154,106:154:5525:106:3762:-257.821,0,-419.104	0/1:188:102,85:102:3664:85:3037:-214.649,0,-273.312	0/1:182:61,121:61:2196:121:4321:-330.774,0,-143.073	0/1:239:149,90:149:5340:90:3186:-212.451,0,-408.786	0/1:16:5,11:5:180:11:396:-30.0157,0,-11.7356	0/1:146:92,54:92:3274:54:1917:-127.124,0,-250.927	0/1:38:21,17:21:756:17:608:-42.9722,0,-56.9281	0/1:6:5,1:5:180:1:36:-1.76725,0,-14.7459	0/1:134:40,94:40:1440:94:3344:-258.59,0,-89.5597	0/1:80:13,67:13:464:67:2404:-188.94,0,-18.0151	0/1:7:3,4:3:108:4:144:-11.1371,0,-7.96796	0/1:16:3,13:3:108:13:464:-36.9171,0,-5.25869	0/1:118:56,62:56:2008:62:2224:-163.57,0,-145.472	0/1:107:29,78:29:1029:78:2804:-217.524,0,-60.7109	0/1:7:5,2:5:180:2:72:-4.68231,0,-14.4449	0/1:291:83,208:83:2969:208:7453:-578.307,0,-179.841	0/1:293:86,207:86:3096:207:7410:-573.477,0,-190.665	0/1:107:36,71:36:1292:71:2533:-192.88,0,-84.3736	0/1:76:48,28:48:1720:28:977:-64.8538,0,-132.185	0/1:167:42,125:42:1500:125:4469:-348.769,0,-85.0226	0/1:129:70,59:70:2520:59:2120:-150.972,0,-188.218	0/1:11:6,5:6:216:5:180:-13.1265,0,-16.4792	0/1:112:60,52:60:2152:52:1872:-133.744,0,-160.232	0/1:89:52,37:52:1860:37:1302:-88.8657,0,-140.888	0/1:26:13,13:13:468:13:468:-34.2037,0,-34.6329	0/1:145:85,60:85:3060:60:2136:-147.482,0,-231.976	0/1:85:53,32:53:1874:32:1148:-77.3601,0,-143.348	0/1:280:162,118:162:5812:118:4225:-293.232,0,-438.903	0/1:195:47,148:47:1684:148:5316:-415.825,0,-93.1462	0/1:253:157,96:157:5644:96:3452:-232.397,0,-431.917	0/1:132:46,85:46:1648:85:3052:-233.263,0,-108.806	0/1:22:5,17:5:180:17:612:-48.4082,0,-9.9294	0/1:151:56,95:56:1993:95:3395:-256.746,0,-134.187	0/1:145:88,57:88:3164:57:2043:-138.978,0,-241.331	0/1:338:212,126:212:7575:126:4505:-300.719,0,-580.037	0/1:192:51,141:51:1828:141:5057:-393.762,0,-107.003	0/1:48:30,18:30:1076:18:648:-43.1902,0,-82.681	0/1:88:63,25:63:2260:25:896:-53.9308,0,-177.172	0/1:141:38,103:38:1364:103:3679:-285.876,0,-80.6155	0/1:52:38,14:38:1368:14:504:-29.7291,0,-107.767	0/1:76:21,55:21:756:55:1972:-153.693,0,-45.4889	0/1:75:49,26:49:1756:26:936:-61.263,0,-135.119	0/1:21:14,7:14:500:7:252:-16.1371,0,-39.0145	0/1:57:25,32:25:900:32:1152:-86.136,0,-64.1623	0/1:55:14,41:14:489:41:1476:-115.525,0,-27.7822	0/1:130:75,55:75:2692:55:1968:-136.853,0,-203.372	0/1:86:51,35:51:1836:35:1247:-84.9966,0,-139.632
chr11	7132754	.	CGTGGTGTCG	TGTGGTGGCG,TGTAGTGGCA	142802	PASS	AB=0.414881,0.571775;ABP=158.641,113.669;AC=136,52;AF=0.723404,0.276596;AN=188;AO=4197,2636;CIGAR=1X6M1X2M,1X2M1X3M1X1M1X;DP=6940;DPB=6941.9;DPRA=0,1.27274;EPP=9073.3,5727.01;EPPR=0;GTI=6;LEN=10,10;MEANALT=2.56383,3.1875;MQM=59.9869,45.0664;MQMR=0;NS=94;NUMALT=2;ODDS=0.209407;PAIRED=0,0;PAIREDR=0;PAO=6,7;PQA=192,217;PQR=192;PRO=6;QA=148846,90138;QR=0;RO=0;RPL=5,0;RPP=9073.3,5727.01;RPPR=0;RPR=4192,2636;RUN=1,1;SAF=4197,2636;SAP=9116.68,5727.01;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:23:0,23,0:0:0:23,0:815,0:-73.6708,-6.92369,0,-73.6708,-6.92369,-73.6708	1/2:42:0,33,9:0:0:33,9:1165,313:-118.532,-23.6393,-13.7053,-95.221,0,-92.5117	1/1:99:0,93,0:0:0:93,0:3291,0:-296.068,-27.9958,0,-296.068,-27.9958,-296.068	1/2:70:0,34,34:0:0:34,34:1218,1172:-193.421,-94.0787,-83.8437,-99.3745,0,-89.1394	1/1:22:0,21,0:0:0:21,0:748,0:-67.2856,-6.32163,0,-67.2856,-6.32163,-67.2856	1/1:41:0,40,0:0:0:40,0:1405,0:-126.512,-12.0412,0,-126.512,-12.0412,-126.512	1/1:36:0,36,0:0:0:36,0:1284,0:-115.863,-10.8371,0,-115.863,-10.8371,-115.863	1/1:79:0,78,0:0:0:78,0:2781,0:-250.169,-23.4803,0,-250.169,-23.4803,-250.169	1/2:40:0,30,10:0:0:30,10:1051,349:-113.684,-28.1601,-19.1292,-85.8679,0,-82.8576	1/1:44:0,43,0:0:0:43,0:1521,0:-136.821,-12.9443,0,-136.821,-12.9443,-136.821	1/1:108:0,107,0:0:0:107,0:3818,0:-343.458,-32.2102,0,-343.458,-32.2102,-343.458	1/2:80:0,39,37:0:0:39,37:1376,1275:-213.363,-101.31,-89.5701,-112.06,0,-100.922	1/2:51:0,26,24:0:0:26,24:927,824:-141.281,-65.7067,-57.8799,-75.6114,0,-68.3867	1/1:212:0,211,0:0:0:211,0:7412,0:-666.898,-63.5173,0,-666.898,-63.5173,-666.898	1/1:71:0,70,0:0:0:70,0:2478,0:-222.993,-21.0721,0,-222.993,-21.0721,-222.993	1/1:80:0,80,0:0:0:80,0:2841,0:-255.928,-24.0824,0,-255.928,-24.0824,-255.928	1/1:60:0,58,0:0:0:58,0:2053,0:-184.682,-17.4597,0,-184.682,-17.4597,-184.682	1/2:31:0,25,6:0:0:25,6:891,210:-89.7155,-17.0783,-9.55258,-72.983,0,-71.1768	1/2:156:0,43,109:0:0:43,109:1540,3740:-420.873,-295.276,-282.332,-125.618,0,-92.8056	1/2:50:0,32,17:0:0:32,17:1128,582:-138.294,-46.4415,-36.8086,-91.8948,0,-86.7773	1/1:72:0,71,0:0:0:71,0:2517,0:-226.421,-21.3731,0,-226.421,-21.3731,-226.421	2/2:12:0,1,10:0:0:1,10:32,339:-30.1917,-27.6153,-27.3143,-3.0103,-0.481972,0	1/2:32:0,15,17:0:0:15,17:528,580:-89.8189,-46.828,-42.3126,-43.3359,0,-38.2184	1/2:13:0,8,5:0:0:8,5:288,172:-37.6579,-14.1465,-11.7382,-23.8592,0,-22.354	1/1:31:0,30,1:0:0:30,1:1067,34:-96.0039,-9.0309,0,-93.2754,-5.96511,-92.9744	1/2:68:0,47,20:0:0:47,20:1642,676:-188.107,-54.5325,-40.3841,-133.553,0,-127.533	1/1:103:0,102,0:0:0:102,0:3633,0:-326.815,-30.7051,0,-326.815,-30.7051,-326.815	1/1:27:0,27,0:0:0:27,0:964,0:-87.0768,-8.12781,0,-87.0768,-8.12781,-87.0768	1/1:89:0,89,0:0:0:89,0:3177,0:-286.093,-26.7917,0,-286.093,-26.7917,-286.093	1/2:37:0,21,16:0:0:21,16:744,543:-104.208,-43.5881,-37.2665,-60.9627,0,-56.1462	1/1:59:0,58,0:0:0:58,0:2072,0:-186.391,-17.4597,0,-186.391,-17.4597,-186.391	2/2:135:0,6,128:0:0:6,128:216,4411:-389.926,-372.301,-370.495,-38.5318,-20.9073,0	1/2:9:0,8,1:0:0:8,1:284,35:-26.3058,-3.15759,-0.74935,-23.4951,0,-23.1941	1/1:12:0,12,0:0:0:12,0:432,0:-39.2212,-3.61236,0,-39.2212,-3.61236,-39.2212	1/1:10:0,10,0:0:0:10,0:360,0:-32.7443,-3.0103,0,-32.7443,-3.0103,-32.7443	1/1:34:0,32,1:0:0:32,1:1140,30:-102.568,-9.63296,0,-100.19,-7.28406,-99.8889	1/2:100:0,58,41:0:0:58,41:2047,1425:-281.431,-114.739,-97.2793,-166.649,0,-154.307	1/2:31:0,22,9:0:0:22,9:788,315:-89.9097,-25.6369,-19.0142,-64.6221,0,-61.9129	1/1:78:0,76,0:0:0:76,0:2700,0:-242.959,-22.8783,0,-242.959,-22.8783,-242.959	2/2:75:0,1,74:0:0:1,74:32,2470:-218.813,-216.235,-215.934,-22.2762,-19.3779,0	1/1:45:0,44,0:0:0:44,0:1576,0:-141.801,-13.2453,0,-141.801,-13.2453,-141.801	1/1:73:0,73,0:0:0:73,0:2624,0:-236.348,-21.9752,0,-236.348,-21.9752,-236.348	1/1:78:0,77,0:0:0:77,0:2736,0:-246.122,-23.1793,0,-246.122,-23.1793,-246.122	1/1:57:0,56,0:0:0:56,0:1970,0:-177.211,-16.8577,0,-177.211,-16.8577,-177.211	1/1:40:0,40,0:0:0:40,0:1418,0:-127.916,-12.0412,0,-127.916,-12.0412,-127.916	1/2:33:0,21,11:0:0:21,11:748,366:-90.0732,-29.0911,-22.7695,-60.9642,0,-57.6528	1/2:36:0,24,12:0:0:24,12:842,414:-101.631,-33.1002,-25.8755,-68.8723,0,-65.26	1/1:66:0,65,0:0:0:65,0:2273,0:-204.576,-19.567,0,-204.576,-19.567,-204.576	1/1:34:0,34,0:0:0:34,0:1208,0:-109.026,-10.235,0,-109.026,-10.235,-109.026	1/2:70:0,35,35:0:0:35,35:1252,1217:-200.407,-98.3087,-87.7727,-102.449,0,-91.913	1/1:59:0,57,0:0:0:57,0:2011,0:-180.882,-17.1587,0,-180.882,-17.1587,-180.882	2/2:244:0,4,233:0:0:4,233:144,7989:-710.415,-698.665,-697.461,-70.14,-58.3721,0	1/1:49:0,48,0:0:0:48,0:1708,0:-153.666,-14.4494,0,-153.666,-14.4494,-153.666	1/1:26:0,25,1:0:0:25,1:884,35:-79.5299,-7.52575,0,-76.6963,-4.34373,-76.3953	2/2:109:0,1,105:0:0:1,105:36,3590:-316.88,-313.943,-313.642,-31.6082,-28.655,0	1/2:53:0,33,19:0:0:33,19:1180,653:-148.208,-51.9754,-42.0414,-96.3403,0,-90.6207	1/2:12:0,7,5:0:0:7,5:248,177:-34.8491,-14.6445,-12.5373,-20.557,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chr11	7132777	.	C	A	72668.7	PASS	AB=0.486065;ABP=10.1514;AC=52;AF=0.276596;AN=188;AO=3267;CIGAR=1X;DP=11463;DPB=11463;DPRA=1.03416;EPP=7053.85;EPPR=17763.5;GTI=0;LEN=1;MEANALT=1.11111;MQM=47.9718;MQMR=59.9605;NS=94;NUMALT=1;ODDS=1.97246;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=116182;QR=288294;RO=8187;RPL=2593;RPP=2450.69;RPPR=116.802;RPR=674;RUN=1;SAF=2598;SAP=2476.27;SAR=669;SRF=4423;SRP=118.196;SRR=3764;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:44:44,0:44:1541:0:0:0,-13.2453,-138.98	0/1:78:58,20:58:2076:20:707:-38.1261,0,-163.604	0/0:142:142,0:142:5022:0:0:0,-42.7463,-452.13	0/1:156:90,66:90:3184:66:2319:-160.652,0,-239.824	0/0:95:95,0:95:3353:0:0:0,-28.5978,-301.982	0/0:72:72,0:72:2513:0:0:0,-21.6742,-226.421	0/0:86:86,0:86:3015:0:0:0,-25.8886,-271.578	0/0:132:132,0:132:4653:0:0:0,-39.736,-418.931	0/1:88:63,25:63:2247:25:891:-53.3196,0,-175.988	0/0:117:117,0:117:4079:0:0:0,-35.2205,-367.302	0/0:173:173,0:173:6094:0:0:0,-52.0782,-548.565	0/1:149:89,60:89:3086:60:2144:-145.322,0,-233.116	0/1:103:53,50:53:1896:50:1762:-126.208,0,-139.912	0/0:305:305,0:305:10618:0:0:0,-91.8141,-955.55	0/0:132:132,0:132:4646:0:0:0,-39.736,-418.307	0/0:138:138,0:138:4841:0:0:0,-41.5421,-435.846	0/0:160:159,1:159:5587:1:36:0,-44.5665,-499.345	0/1:92:57,35:57:1969:35:1256:-85.0254,0,-149.787	0/1:191:71,120:71:2501:120:4251:-314.33,0,-167.846	0/1:109:61,48:61:2157:48:1693:-118.22,0,-161.584	0/0:145:145,0:145:5123:0:0:0,-43.6493,-461.213	0/1:37:9,28:9:324:28:991:-78.0585,0,-18.3677	0/1:62:34,27:34:1220:27:951:-66.3782,0,-91.3842	0/1:52:40,12:40:1399:12:413:-21.6513,0,-110.464	0/0:58:57,1:57:1998:1:36:0,-13.9112,-176.541	0/1:147:102,45:102:3612:45:1604:-100.017,0,-281.035	0/0:206:206,0:206:7282:0:0:0,-62.0122,-655.429	0/0:75:75,0:75:2596:0:0:0,-22.5772,-233.886	0/0:211:211,0:211:7460:0:0:0,-63.5173,-671.452	0/1:75:45,30:45:1582:30:1051:-71.3078,0,-120.092	0/0:97:97,0:97:3431:0:0:0,-29.1999,-309.004	1/1:130:7,123:7:239:123:4406:-366.816,-17.2912,0	0/1:9:8,1:8:284:1:36:-0.839245,0,-23.1941	0/0:13:13,0:13:468:0:0:0,-3.91339,-42.4596	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:39:38,1:38:1355:1:36:0,-8.21916,-118.648	0/1:240:151,89:151:5285:89:3164:-211.35,0,-403.543	0/1:77:53,24:53:1848:24:855:-53.6836,0,-143.418	0/0:133:133,0:133:4665:0:0:0,-40.037,-420.018	1/1:75:1,73:1:36:73:2580:-224.16,-19.029,0	0/0:115:115,0:115:4088:0:0:0,-34.6184,-368.106	0/0:101:101,0:101:3615:0:0:0,-30.404,-325.555	0/0:123:122,0:122:4311:0:0:0,-36.7257,-387.809	0/0:140:140,0:140:4911:0:0:0,-42.1442,-442.145	0/0:108:108,0:108:3768:0:0:0,-32.5112,-339.321	0/1:77:51,26:51:1815:26:911:-58.6812,0,-140.451	0/1:65:45,20:45:1560:20:720:-44.1185,0,-121.121	0/0:108:108,0:108:3815:0:0:0,-32.5112,-343.547	0/0:88:88,0:88:3112:0:0:0,-26.4906,-280.31	0/1:107:54,53:54:1919:53:1881:-136.045,0,-140.776	0/0:154:154,0:154:5429:0:0:0,-46.3586,-488.734	1/1:239:6,233:6:201:233:8352:-722.359,-53.558,0	0/0:93:93,0:93:3332:0:0:0,-27.9958,-300.097	0/0:38:37,1:37:1298:1:36:0,-7.86037,-113.538	1/1:109:2,107:2:72:107:3809:-327.61,-25.9755,0	0/1:92:63,28:63:2231:28:1008:-61.7187,0,-173.301	0/1:38:19,19:19:672:19:680:-49.9338,0,-49.3677	1/1:229:11,218:11:392:218:7787:-656.364,-33.3158,0	1/1:121:7,114:7:252:114:4062:-339.091,-13.3957,0	0/0:79:78,1:78:2778:1:36:0,-20.1831,-246.662	0/1:167:106,61:106:3721:61:2179:-144.689,0,-284.822	1/1:83:5,78:5:176:78:2781:-231.12,-8.80047,0	0/1:79:66,13:66:2308:13:455:-17.4829,0,-184.194	0/0:94:92,2:92:3276:2:68:0,-21.8812,-288.646	0/1:60:38,22:38:1338:22:775:-49.5111,0,-102.657	0/0:69:69,0:69:2405:0:0:0,-20.7711,-216.707	0/1:118:80,38:80:2843:38:1352:-84.7286,0,-220.585	0/0:121:120,1:120:4194:1:36:0,-32.8264,-374.047	0/1:381:61,320:61:2144:320:11348:-887.907,0,-78.1054	0/0:93:93,0:93:3288:0:0:0,-27.9958,-296.14	0/0:134:134,0:134:4723:0:0:0,-40.338,-425.229	1/1:129:7,122:7:239:122:4357:-362.964,-16.9902,0	0/0:78:77,1:77:2719:1:36:0,-19.9593,-241.431	0/0:62:62,0:62:2189:0:0:0,-18.6639,-197.275	0/0:287:285,0:285:10084:0:0:0,-85.7935,-907.086	0/1:100:55,45:55:1949:45:1599:-112.987,0,-145.581	0/0:126:126,0:126:4443:0:0:0,-37.9298,-400.042	0/1:75:43,32:43:1523:32:1140:-78.282,0,-114.729	1/1:138:9,129:9:324:129:4605:-373.324,-12.0363,0	0/1:73:43,30:43:1535:30:1044:-71.3095,0,-116.467	0/0:81:81,0:81:2867:0:0:0,-24.3834,-258.26	0/0:173:172,1:172:6059:1:36:0,-48.4799,-541.798	0/1:124:72,51:72:2515:51:1791:-123.522,0,-189.215	0/0:146:145,1:145:5098:1:36:0,-40.3521,-455.368	0/0:135:135,0:135:4712:0:0:0,-40.639,-424.244	0/1:218:141,77:141:4922:77:2720:-176.953,0,-377.509	0/0:56:56,0:56:1976:0:0:0,-16.8577,-178.094	0/1:134:72,61:72:2520:61:2171:-152.508,0,-186.641	0/0:146:146,0:146:5086:0:0:0,-43.9504,-457.886	0/0:166:166,0:166:5874:0:0:0,-49.971,-528.773	0/1:558:141,416:141:4938:416:14800:-1139.75,0,-276.548	0/1:103:37,66:37:1324:66:2353:-179.762,0,-88.456	0/0:71:71,0:71:2524:0:0:0,-21.3731,-227.41	0/0:206:205,1:205:7174:1:36:0,-58.4139,-642.127
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chr11	10272016	.	T	A	255706	PASS	AB=0.493123;ABP=5.69809;AC=148;AF=0.787234;AN=188;AO=11892;CIGAR=1X;DP=15227;DPB=15227;DPRA=0;EPP=25826.2;EPPR=7225.33;GTI=0;LEN=1;MEANALT=1.07447;MQM=59.9755;MQMR=59.9732;NS=94;NUMALT=1;ODDS=5.67524;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=426309;QR=119288;RO=3326;RPL=0;RPP=25826.2;RPPR=7225.33;RPR=11892;RUN=1;SAF=11892;SAP=25826.2;SAR=0;SRF=3326;SRP=7225.33;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:66:0,66:0:0:66:2372:-213.738,-19.868,0	0/1:215:98,116:98:3516:116:4145:-308.452,0,-251.869	1/1:305:0,305:0:0:305:10949:-985.301,-91.8142,0	0/1:434:210,224:210:7548:224:7998:-588.872,0,-548.709	1/1:149:0,149:0:0:149:5336:-480.371,-44.8535,0	1/1:147:0,147:0:0:147:5275:-474.884,-44.2514,0	1/1:221:0,221:0:0:221:7911:-710.912,-66.5276,0	1/1:217:0,217:0:0:217:7808:-702.736,-65.3235,0	0/1:147:70,77:70:2493:77:2749:-203.399,0,-180.37	1/1:106:1,105:1:36:105:3764:-335.361,-28.3109,0	1/1:67:0,67:0:0:67:2412:-217.336,-20.169,0	0/1:74:38,36:38:1368:36:1296:-94.6677,0,-101.145	0/1:69:41,28:41:1454:28:1008:-70.2653,0,-110.383	1/1:84:0,84:0:0:84:3016:-271.67,-25.2865,0	0/1:66:29,37:29:1044:37:1328:-99.9543,0,-74.4068	1/1:35:0,35:0:0:35:1260:-113.705,-10.5361,0	1/1:77:0,77:0:0:77:2751:-247.832,-23.1793,0	0/1:68:44,24:44:1584:24:860:-57.2518,0,-122.381	0/1:39:18,21:18:648:21:756:-56.6271,0,-46.9117	0/1:383:198,185:198:7097:185:6618:-480.402,0,-523.064	1/1:209:0,209:0:0:209:7489:-674.05,-62.9153,0	0/1:329:222,106:222:7965:106:3797:-242.828,0,-617.771	0/1:145:82,63:82:2940:63:2253:-159.382,0,-221.185	1/1:191:0,191:0:0:191:6856:-617.107,-57.4967,0	1/1:161:0,161:0:0:161:5772:-519.594,-48.4658,0	0/1:489:253,236:253:9076:236:8459:-614.107,0,-669.61	1/1:367:0,367:0:0:367:13159:-1184.11,-110.478,0	1/1:37:0,37:0:0:37:1332:-120.182,-11.1381,0	1/1:576:0,576:0:0:576:20628:-1856,-173.393,0	0/1:256:145,111:145:5200:111:3992:-282.275,0,-391.074	1/1:216:0,216:0:0:216:7748:-697.35,-65.0225,0	0/1:11:7,4:7:252:4:144:-10.0023,0,-19.7176	1/1:29:0,29:0:0:29:1021:-92.2003,-8.72987,0	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:30:0,30:0:0:30:1072:-96.7925,-9.0309,0	0/1:228:119,108:119:4276:108:3884:-281.059,0,-316.323	0/1:391:196,195:196:7028:195:7000:-512.358,0,-514.859	1/1:58:0,58:0:0:58:2073:-186.839,-17.4597,0	1/1:8:0,8:0:0:8:288:-26.2674,-2.40824,0	1/1:353:0,353:0:0:353:12649:-1138.23,-106.264,0	1/1:40:0,40:0:0:40:1440:-129.898,-12.0412,0	1/1:275:0,275:0:0:275:9827:-884.326,-82.7833,0	1/1:64:0,64:0:0:64:2304:-207.62,-19.2659,0	1/1:66:0,66:0:0:66:2365:-213.108,-19.868,0	0/1:189:92,97:92:3308:97:3483:-256.785,0,-241.043	0/1:262:110,152:110:3952:152:5468:-413.375,0,-277	1/1:388:3,385:3:108:385:13820:-1233.4,-106.724,0	1/1:185:0,185:0:0:185:6625:-596.327,-55.6906,0	0/1:221:99,122:99:3560:122:4350:-325.145,0,-254.079	1/1:383:0,383:0:0:383:13686:-1231.51,-115.294,0	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	1/1:253:0,253:0:0:253:9073:-816.542,-76.1606,0	1/1:100:0,100:0:0:100:3596:-323.845,-30.103,0	0/1:36:9,27:9:324:27:972:-76.9608,0,-18.6688	0/1:216:92,124:92:3300:124:4452:-335.697,0,-232.196	0/1:95:45,50:45:1612:50:1792:-132.965,0,-116.772	0/1:21:7,14:7:248:14:504:-39.3765,0,-16.3426	1/1:49:0,49:0:0:49:1756:-158.324,-14.7505,0	1/1:148:0,148:0:0:148:5312:-478.213,-44.5524,0	0/1:133:73,60:73:2620:60:2145:-153.279,0,-196.01	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/1:419:235,184:235:8444:184:6596:-467.587,0,-633.826	1/1:348:6,341:6:201:341:12225:-1081.53,-86.3966,0	0/1:127:55,72:55:1972:72:2576:-193.857,0,-139.524	1/1:188:0,188:0:0:188:6752:-607.751,-56.5936,0	0/1:295:146,147:146:5228:147:5252:-384.167,0,-381.989	1/1:163:5,158:5:176:158:5670:-494.232,-32.8829,0	0/1:29:17,12:17:612:12:424:-29.766,0,-46.6836	1/1:133:0,133:0:0:133:4738:-426.575,-40.037,0	1/1:121:0,121:0:0:121:4325:-389.424,-36.4246,0	0/1:29:16,13:16:576:13:468:-33.7298,0,-43.4451	1/1:252:1,251:1:36:251:8975:-804.11,-72.2613,0	1/1:97:0,97:0:0:97:3484:-313.77,-29.1999,0	1/1:251:0,251:0:0:251:9012:-810.964,-75.5585,0	0/1:228:102,124:102:3652:124:4453:-332.546,0,-260.264	1/1:235:0,234:0:0:234:8412:-756.719,-70.441,0	0/1:161:79,82:79:2821:82:2952:-217.447,0,-205.662	0/1:20:8,12:8:273:12:428:-32.8382,0,-18.8796	0/1:186:93,93:93:3332:93:3340:-244.825,0,-244.106	1/1:254:0,254:0:0:254:9105:-819.421,-76.4616,0	1/1:336:0,336:0:0:336:12044:-1083.8,-101.146,0	0/1:118:61,57:61:2188:57:2033:-147.719,0,-161.664	1/1:71:0,71:0:0:71:2543:-229.121,-21.3731,0	1/1:87:0,87:0:0:87:3128:-281.745,-26.1896,0	0/1:136:60,76:60:2156:76:2732:-205.182,0,-153.367	1/1:53:0,53:0:0:53:1904:-171.638,-15.9546,0	0/1:90:44,46:44:1576:46:1656:-122.236,0,-115.039	1/1:56:0,56:0:0:56:2016:-181.713,-16.8577,0	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:104:51,53:51:1832:53:1908:-140.69,0,-133.854	0/1:61:40,21:40:1440:21:756:-50.0044,0,-111.535	1/1:213:0,213:0:0:213:7635:-687.182,-64.1194,0	1/1:99:0,99:0:0:99:3549:-319.616,-29.802,0
chr11	10272039	.	T	G	69620.6	PASS	AB=0.514115;ABP=14.0448;AC=40;AF=0.212766;AN=188;AO=3294;CIGAR=1X;DP=14754;DPB=14754;DPRA=1.15395;EPP=2871.54;EPPR=6286.35;GTI=0;LEN=1;MEANALT=1.11111;MQM=59.9794;MQMR=59.9807;NS=94;NUMALT=1;ODDS=3.46878;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117707;QR=409088;RO=11450;RPL=604;RPP=2871.54;RPPR=6286.35;RPR=2690;RUN=1;SAF=3294;SAP=7155.84;SAR=0;SRF=11450;SRP=24866.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:62:62,0:62:2193:0:0:0,-18.6639,-197.634	0/1:206:111,95:111:3942:95:3402:-244.382,0,-292.959	0/0:292:292,0:292:10459:0:0:0,-87.9008,-941.226	0/1:419:214,203:214:7654:203:7257:-527.293,0,-563.002	0/0:145:145,0:145:5176:0:0:0,-43.6493,-465.979	0/0:138:138,0:138:4915:0:0:0,-41.5421,-442.503	0/0:210:210,0:210:7468:0:0:0,-63.2163,-672.165	0/0:206:206,0:206:7365:0:0:0,-62.0122,-662.889	0/1:143:74,69:74:2631:69:2467:-179.237,0,-193.99	0/0:106:105,1:105:3760:1:36:0,-28.3109,-335.001	0/0:66:66,0:66:2356:0:0:0,-19.868,-212.299	0/1:73:35,38:35:1252:38:1368:-101.446,0,-91.0099	0/1:68:27,41:27:959:41:1455:-110.775,0,-66.1554	0/0:83:83,0:83:2984:0:0:0,-24.9855,-268.791	0/1:65:36,29:36:1296:29:1040:-74.3474,0,-97.377	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/0:73:73,0:73:2607:0:0:0,-21.9752,-234.878	0/1:68:24,44:24:851:44:1576:-121.662,0,-56.4394	0/1:38:20,18:20:716:18:648:-47.2127,0,-53.3286	0/1:376:178,198:178:6395:198:7096:-525.081,0,-462.447	0/0:202:202,0:202:7224:0:0:0,-60.8081,-650.209	0/1:322:104,218:104:3700:218:7790:-604.198,0,-236.273	0/1:142:61,81:61:2188:81:2892:-217.77,0,-154.439	0/0:183:183,0:183:6529:0:0:0,-55.0885,-587.694	0/0:151:151,0:151:5375:0:0:0,-45.4555,-483.885	0/1:479:226,253:226:8040:253:9047:-670.013,0,-579.431	0/0:352:350,0:350:12475:0:0:0,-105.36,-1122.23	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/0:563:563,0:563:20142:0:0:0,-169.48,-1812.29	0/1:255:110,145:110:3931:145:5184:-389.935,0,-277.22	0/0:207:206,0:206:7371:0:0:0,-62.0122,-663.078	0/1:11:4,7:4:144:7:248:-19.3529,0,-10.0023	0/0:28:28,0:28:991:0:0:0,-8.42884,-89.5035	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:224:104,120:104:3714:120:4295:-319.296,0,-267.03	0/1:385:189,196:189:6756:196:6941:-508.859,0,-492.219	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.876	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:339:339,0:339:12119:0:0:0,-102.049,-1090.56	0/0:40:40,0:40:1425:0:0:0,-12.0412,-128.545	0/0:266:266,0:266:9445:0:0:0,-80.074,-850.015	0/0:63:63,0:63:2252:0:0:0,-18.9649,-202.943	0/0:66:66,0:66:2347:0:0:0,-19.868,-211.489	0/1:182:90,92:90:3228:92:3284:-240.99,0,-235.954	0/1:256:146,109:146:5236:109:3904:-274.431,0,-394.254	0/0:376:373,3:373:13284:3:108:0,-103.112,-1185.26	0/0:178:177,0:177:6352:0:0:0,-53.2823,-571.409	0/1:213:116,97:116:4152:97:3476:-248.932,0,-309.744	0/0:377:377,0:377:13510:0:0:0,-113.488,-1215.67	0/1:13:10,3:10:356:3:108:-6.16178,0,-28.4679	0/0:244:244,0:244:8748:0:0:0,-73.4513,-787.308	0/0:96:96,0:96:3423:0:0:0,-28.8989,-308.284	0/1:34:25,9:25:892:9:324:-19.2708,0,-70.3647	0/1:212:119,93:119:4244:93:3311:-234.391,0,-318.193	0/1:88:46,42:46:1644:42:1508:-109.524,0,-121.758	0/1:19:12,7:12:417:7:252:-17.3094,0,-32.1406	0/0:47:47,0:47:1680:0:0:0,-14.1484,-151.487	0/0:143:143,0:143:5088:0:0:0,-43.0473,-458.065	0/1:131:60,71:60:2156:71:2530:-188.515,0,-154.872	0/1:11:8,3:8:288:3:108:-6.76384,0,-22.9561	0/1:410:174,236:174:6224:236:8419:-634.292,0,-436.834	0/0:332:326,6:326:11663:6:216:0,-80.1514,-1029.6	0/1:126:71,55:71:2517:55:1980:-140.545,0,-188.851	0/0:184:184,0:184:6564:0:0:0,-55.3895,-589.481	0/1:281:138,143:138:4948:143:5104:-374.905,0,-360.843	0/0:157:152,5:152:5440:5:163:0,-32.2712,-474.739	0/1:30:12,18:12:417:18:648:-49.621,0,-28.8293	0/0:127:127,0:127:4547:0:0:0,-38.2308,-409.396	0/0:118:118,0:118:4208:0:0:0,-35.5215,-378.903	0/1:27:12,15:12:432:15:531:-39.9941,0,-31.0934	0/0:244:243,1:243:8669:1:36:0,-69.853,-776.593	0/0:94:94,0:94:3368:0:0:0,-28.2968,-303.336	0/0:240:239,0:239:8548:0:0:0,-71.9462,-768.869	0/1:220:122,98:122:4368:98:3503:-249.254,0,-327.067	0/0:232:232,0:232:8254:0:0:0,-69.839,-742.874	0/1:157:78,79:78:2781:79:2824:-207.138,0,-203.268	0/1:18:11,7:11:396:7:252:-17.6104,0,-30.5642	0/1:182:90,91:90:3232:91:3272:-239.853,0,-236.255	0/0:246:246,0:246:8803:0:0:0,-74.0534,-792.255	0/0:318:318,0:318:11370:0:0:0,-95.7275,-1023.18	0/1:116:56,60:56:2016:60:2145:-158.396,0,-146.793	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.806	0/0:85:85,0:85:3043:0:0:0,-25.5875,-274.099	0/1:133:72,61:72:2584:61:2188:-157.149,0,-192.772	0/0:51:51,0:51:1811:0:0:0,-15.3525,-163.271	0/1:87:43,43:43:1544:43:1527:-111.474,0,-113.005	0/0:56:56,0:56:1999:0:0:0,-16.8577,-180.183	0/0:39:39,0:39:1395:0:0:0,-11.7402,-125.848	0/1:99:49,50:49:1737:50:1772:-129.958,0,-126.811	0/1:57:16,41:16:576:41:1472:-115.617,0,-35.0163	0/0:209:209,0:209:7462:0:0:0,-62.9153,-671.62	0/0:98:98,0:98:3504:0:0:0,-29.5009,-315.571
chr11	10272063	.	G	A	249023	PASS	AB=0.496261;ABP=3.78984;AC=148;AF=0.787234;AN=188;AO=11713;CIGAR=1X;DP=14968;DPB=14968;DPRA=0;EPP=25437.5;EPPR=7071.15;GTI=0;LEN=1;MEANALT=1;MQM=59.9777;MQMR=59.9954;NS=94;NUMALT=1;ODDS=3.34549;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=416841;QR=115882;RO=3255;RPL=11713;RPP=25437.5;RPPR=7071.15;RPR=0;RUN=1;SAF=11713;SAP=25437.5;SAR=0;SRF=3255;SRP=7071.15;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:67:0,67:0:0:67:2380:-214.459,-20.169,0	0/1:210:94,116:94:3360:116:4093:-305.341,0,-239.401	1/1:304:0,304:0:0:304:10820:-973.71,-91.5131,0	0/1:426:207,219:207:7397:219:7825:-576.035,0,-537.538	1/1:146:0,146:0:0:146:5211:-469.13,-43.9504,0	1/1:146:1,145:1:36:145:5128:-458.067,-40.3521,0	1/1:214:0,214:0:0:214:7607:-684.047,-64.4204,0	1/1:217:2,215:2:72:215:7580:-675.41,-58.4868,0	0/1:142:68,74:68:2413:74:2625:-193.751,0,-174.679	1/1:106:1,105:1:36:105:3739:-333.113,-28.3109,0	1/1:65:0,65:0:0:65:2318:-208.879,-19.567,0	0/1:71:35,36:35:1218:36:1280:-94.1301,0,-88.5487	0/1:67:39,28:39:1382:28:981:-68.4315,0,-104.508	1/1:84:0,84:0:0:84:3000:-270.232,-25.2865,0	0/1:64:28,36:28:992:36:1283:-96.5067,0,-70.3285	1/1:35:0,35:0:0:35:1233:-111.272,-10.5361,0	1/1:78:0,78:0:0:78:2783:-250.711,-23.4803,0	0/1:65:42,23:42:1488:23:815:-54.1045,0,-114.648	0/1:38:18,20:18:644:20:712:-52.9675,0,-46.8515	0/1:373:191,182:191:6815:182:6481:-471.093,0,-501.137	1/1:202:0,202:0:0:202:7146:-643.205,-60.8081,0	0/1:319:214,105:214:7607:105:3734:-240.233,0,-588.644	0/1:143:80,63:80:2843:63:2256:-160.256,0,-213.062	1/1:190:0,190:0:0:190:6778:-610.093,-57.1957,0	1/1:158:0,158:0:0:158:5624:-506.282,-47.5627,0	0/1:485:251,234:251:8939:234:8334:-604.072,0,-658.493	1/1:357:0,357:0:0:357:12725:-1145.08,-107.468,0	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	1/1:567:0,567:0:0:567:20241:-1821.2,-170.684,0	0/1:251:140,111:140:5004:111:3951:-280.095,0,-374.95	1/1:213:0,213:0:0:213:7543:-678.917,-64.1194,0	0/1:11:7,4:7:243:4:144:-10.0023,0,-18.8962	1/1:28:0,28:0:0:28:1004:-90.6759,-8.42884,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	1/1:29:0,29:0:0:29:1024:-92.4726,-8.72987,0	0/1:226:119,107:119:4221:107:3820:-275.965,0,-312.039	0/1:386:197,189:197:7031:189:6733:-489.85,0,-516.612	1/1:55:2,53:2:72:53:1888:-163.362,-9.71993,0	1/1:7:0,7:0:0:7:243:-22.2075,-2.10721,0	1/1:343:0,343:0:0:343:12251:-1102.43,-103.253,0	1/1:40:0,40:0:0:40:1440:-129.898,-12.0412,0	1/1:272:0,272:0:0:272:9703:-873.224,-81.8802,0	1/1:64:1,63:1:36:63:2260:-200.064,-15.6676,0	1/1:67:0,67:0:0:67:2393:-215.626,-20.169,0	0/1:184:88,96:88:3134:96:3413:-251.996,0,-226.894	0/1:258:108,150:108:3829:150:5343:-403.34,0,-267.143	1/1:381:3,378:3:108:378:13455:-1200.64,-104.617,0	1/1:179:0,179:0:0:179:6371:-573.484,-53.8844,0	0/1:216:96,120:96:3432:120:4258:-318.377,0,-244.071	1/1:378:0,378:0:0:378:13446:-1209.94,-113.789,0	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	1/1:249:0,249:0:0:249:8867:-798.019,-74.9565,0	1/1:100:0,100:0:0:100:3552:-319.888,-30.103,0	0/1:36:9,27:9:306:27:959:-75.7883,0,-17.0315	0/1:213:90,123:90:3186:123:4332:-325.931,0,-222.843	0/1:90:40,50:40:1420:50:1747:-130.418,0,-101.005	0/1:19:6,13:6:216:13:460:-36.0158,0,-14.0709	1/1:48:0,48:0:0:48:1695:-152.834,-14.4494,0	1/1:145:0,145:0:0:145:5185:-466.789,-43.6494,0	0/1:131:71,60:71:2527:60:2156:-154.872,0,-188.247	0/1:11:2,9:2:68:9:324:-26.1945,0,-3.14638	0/1:419:238,181:238:8508:181:6415:-451.31,0,-639.59	1/1:341:5,336:5:176:336:11974:-1061.32,-86.4662,0	0/1:126:54,72:54:1917:72:2568:-193.441,0,-134.876	1/1:186:0,186:0:0:186:6600:-593.458,-55.9916,0	0/1:285:142,143:142:5077:143:5067:-370.381,0,-371.28	1/1:157:3,154:3:108:154:5501:-485.141,-37.1865,0	0/1:30:18,12:18:625:12:428:-29.8279,0,-47.5416	1/1:131:0,131:0:0:131:4631:-416.956,-39.4349,0	1/1:119:1,118:1:36:118:4170:-371.882,-32.2243,0	0/1:29:16,13:16:548:13:468:-33.7298,0,-40.9114	1/1:244:2,242:2:72:242:8604:-767.524,-66.6146,0	1/1:97:0,97:0:0:97:3472:-312.692,-29.1999,0	1/1:243:0,243:0:0:243:8606:-774.539,-73.1503,0	0/1:221:99,122:99:3552:122:4327:-323.08,0,-253.36	1/1:235:0,235:0:0:235:8406:-756.542,-70.7421,0	0/1:154:74,80:74:2607:80:2839:-209.391,0,-188.518	0/1:19:7,12:7:252:12:428:-33.1392,0,-17.3094	0/1:184:91,93:91:3240:93:3320:-243.629,0,-236.431	1/1:252:0,252:0:0:252:8981:-808.271,-75.8596,0	1/1:332:0,332:0:0:332:11835:-1065.01,-99.942,0	0/1:116:58,58:58:2059:58:2068:-151.472,0,-150.661	1/1:70:0,70:0:0:70:2482:-223.633,-21.0721,0	1/1:88:1,87:1:36:87:3111:-276.618,-22.8924,0	0/1:135:60,75:60:2144:75:2679:-200.716,0,-152.589	1/1:53:0,53:0:0:53:1896:-170.918,-15.9546,0	0/1:87:42,45:42:1491:45:1599:-118.01,0,-108.294	1/1:56:0,56:0:0:56:2004:-180.634,-16.8577,0	1/1:43:0,43:0:0:43:1544:-139.253,-12.9443,0	0/1:103:50,53:50:1783:53:1891:-139.461,0,-129.746	0/1:62:41,21:41:1468:21:737:-47.9868,0,-113.752	1/1:212:0,212:0:0:212:7548:-679.363,-63.8184,0	1/1:98:0,98:0:0:98:3478:-313.23,-29.5009,0
chr11	10272071	.	T	A	56040.3	PASS	AB=0.513352;ABP=12.8682;AC=40;AF=0.212766;AN=188;AO=3284;CIGAR=1X;DP=14687;DPB=14687;DPRA=1.15914;EPP=7134.13;EPPR=24738.3;GTI=0;LEN=1;MEANALT=1.06667;MQM=59.9878;MQMR=59.9796;NS=94;NUMALT=1;ODDS=2.59992;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117548;QR=404209;RO=11391;RPL=3284;RPP=7134.13;RPPR=24738.3;RPR=0;RUN=1;SAF=3284;SAP=7134.13;SAR=0;SRF=11391;SRP=24738.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:59:59,0:59:2086:0:0:0,-17.7608,-188.009	0/1:207:112,95:112:3969:95:3412:-244.98,0,-295.09	0/0:289:289,0:289:10212:0:0:0,-86.9977,-919.021	0/1:421:212,209:212:7524:209:7488:-547.228,0,-550.467	0/0:143:143,0:143:5052:0:0:0,-43.0473,-454.828	0/0:143:143,0:143:5057:0:0:0,-43.0473,-455.28	0/0:208:208,0:208:7372:0:0:0,-62.6142,-662.43	0/0:208:208,0:208:7336:0:0:0,-62.6142,-660.291	0/1:136:66,70:66:2368:70:2496:-183.953,0,-172.438	0/0:102:101,1:101:3593:1:36:0,-27.1068,-319.978	0/0:64:64,0:64:2272:0:0:0,-19.2659,-204.743	0/1:74:35,39:35:1251:39:1404:-104.383,0,-90.6181	0/1:68:28,40:28:984:40:1436:-109.068,0,-68.4006	0/0:82:82,0:82:2908:0:0:0,-24.6845,-261.955	0/1:65:37,28:37:1324:28:1000:-70.7484,0,-99.8951	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/0:76:76,0:76:2695:0:0:0,-22.8783,-242.795	0/1:65:23,42:23:812:42:1503:-115.997,0,-53.834	0/1:36:18,18:18:618:18:648:-47.8148,0,-45.1037	0/1:371:177,194:177:6321:194:6939:-512.894,0,-457.295	0/0:194:194,0:194:6915:0:0:0,-58.3998,-622.42	0/1:325:101,224:101:3572:224:8039:-625.69,0,-223.854	0/1:141:59,82:59:2067:82:2932:-221.67,0,-143.853	0/0:184:184,0:184:6527:0:0:0,-55.3895,-587.518	0/0:154:154,0:154:5431:0:0:0,-46.3586,-488.926	0/1:472:224,247:224:7952:247:8832:-652.723,0,-573.563	0/0:350:350,0:350:12422:0:0:0,-105.36,-1117.83	0/0:36:35,0:35:1228:0:0:0,-10.536,-110.61	0/0:560:560,0:560:19897:0:0:0,-168.577,-1790.27	0/1:250:106,144:106:3753:144:5147:-388.114,0,-262.585	0/0:208:208,0:208:7337:0:0:0,-62.6142,-660.387	0/1:10:4,6:4:140:6:216:-16.7802,0,-9.93428	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:16:16,0:16:549:0:0:0,-4.81648,-49.7324	0/0:28:27,0:27:956:0:0:0,-8.12781,-85.9961	0/1:225:105,120:105:3686:120:4303:-319.714,0,-264.214	0/1:381:187,194:187:6668:194:6937:-509.658,0,-485.509	0/0:51:50,0:50:1792:0:0:0,-15.0515,-161.203	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:341:341,0:341:12092:0:0:0,-102.651,-1088.14	0/0:40:40,0:40:1410:0:0:0,-12.0412,-127.196	0/0:259:259,0:259:9212:0:0:0,-77.9668,-829.054	0/0:63:63,0:63:2236:0:0:0,-18.9649,-201.504	0/0:65:65,0:65:2293:0:0:0,-19.5669,-206.63	0/1:181:91,90:91:3230:90:3224:-235.896,0,-236.436	0/1:259:150,109:150:5304:109:3920:-275.024,0,-399.533	0/0:371:368,3:368:13068:3:108:0,-101.607,-1165.77	0/0:179:179,0:179:6372:0:0:0,-53.8844,-573.572	0/1:215:117,98:117:4171:98:3487:-249.318,0,-310.852	0/0:370:370,0:370:13097:0:0:0,-111.381,-1178.55	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	0/0:244:244,0:244:8726:0:0:0,-73.4513,-785.331	0/0:93:93,0:93:3323:0:0:0,-27.9958,-299.288	0/1:34:26,8:26:924:8:288:-16.0324,0,-73.2426	0/1:212:122,90:122:4306:90:3216:-225.845,0,-323.847	0/1:88:46,42:46:1632:42:1508:-109.524,0,-120.678	0/1:19:12,7:12:424:7:252:-17.3094,0,-32.7768	0/0:46:45,0:45:1586:0:0:0,-13.5463,-142.786	0/0:143:143,0:143:5103:0:0:0,-43.0473,-459.414	0/1:129:58,71:58:2062:71:2556:-191.457,0,-147.017	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	0/1:412:179,233:179:6389:233:8347:-627.211,0,-451.075	0/0:332:327,5:327:11605:5:180:0,-83.3899,-1027.63	0/1:123:68,55:68:2409:55:1959:-139.558,0,-180.039	0/0:181:181,0:181:6409:0:0:0,-54.4864,-575.542	0/1:288:143,145:143:5111:145:5186:-380.182,0,-373.35	0/0:160:155,5:155:5515:5:180:0,-31.6127,-479.927	0/1:29:12,17:12:432:17:591:-44.7854,0,-30.4913	0/0:128:128,0:128:4536:0:0:0,-38.5318,-408.41	0/0:118:118,0:118:4182:0:0:0,-35.5215,-376.565	0/1:28:12,16:12:432:16:568:-43.023,0,-30.7924	0/0:242:240,2:240:8463:2:72:0,-66.0125,-754.838	0/0:94:94,0:94:3330:0:0:0,-28.2968,-299.919	0/0:235:234,0:234:8250:0:0:0,-70.441,-742.156	0/1:224:124,100:124:4427:100:3562:-253.345,0,-331.172	0/0:225:225,0:225:8007:0:0:0,-67.7317,-720.657	0/1:153:77,76:77:2751:76:2724:-199.345,0,-201.774	0/1:19:11,8:11:396:8:288:-20.5478,0,-30.2632	0/1:184:91,93:91:3248:93:3335:-244.977,0,-237.152	0/0:238:238,0:238:8421:0:0:0,-71.6451,-757.903	0/0:325:324,0:324:11501:0:0:0,-97.5337,-1034.61	0/1:115:57,57:57:2018:57:2048:-149.914,0,-147.215	0/0:68:67,0:67:2388:0:0:0,-20.169,-214.857	0/0:86:86,0:86:3065:0:0:0,-25.8886,-276.078	0/1:134:73,61:73:2588:61:2171:-155.318,0,-192.83	0/0:51:51,0:51:1811:0:0:0,-15.3525,-163.271	0/1:91:45,45:45:1570:45:1598:-116.657,0,-114.137	0/0:53:53,0:53:1888:0:0:0,-15.9546,-170.198	0/0:40:40,0:40:1407:0:0:0,-12.0412,-126.926	0/1:100:50,50:50:1762:50:1796:-131.819,0,-128.759	0/1:60:19,41:19:671:41:1472:-114.714,0,-42.654	0/0:207:206,0:206:7363:0:0:0,-62.0122,-662.357	0/0:94:93,0:93:3307:0:0:0,-27.9958,-297.49
chr11	11355232	.	ATCAG	CTTAT,CTTAG	265124	PASS	AB=0.521015,0.475009;ABP=23.2713,31.6629;AC=148,40;AF=0.787234,0.212766;AN=188;AO=10179,2529;CIGAR=1X1M1X1M1X,1X1M1X2M;DP=12761;DPB=12760.8;DPRA=0,1.14509;EPP=22028.3,5477.31;EPPR=5.18177;GTI=1;LEN=5,5;MEANALT=2.02128,2.47917;MQM=43.1638,59.0186;MQMR=60;NS=94;NUMALT=2;ODDS=0.1334;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=359433,89266;QR=36;RO=1;RPL=10169,2527;RPP=22019.7,5477.31;RPPR=5.18177;RPR=10,2;RUN=1,1;SAF=10178,2529;SAP=22097.7,5494.66;SAR=1,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:91:0,89,1:0:0:89,1:3114,33:-268.451,-26.7917,0,-265.783,-24.1108,-265.482	1/2:35:0,24,11:0:0:24,11:830,386:-94.8589,-31.7553,-24.5306,-63.4464,0,-60.1351	1/1:230:0,229,1:0:0:229,1:8112,36:-699.118,-68.9359,0,-696.182,-65.6396,-695.881	1/2:384:0,174,208:0:0:174,208:6169,7349:-1091.74,-598.166,-545.787,-493.565,0,-430.95	1/1:144:0,142,2:0:0:142,2:5033,70:-441.947,-42.7463,0,-436.251,-36.701,-435.649	1/1:123:0,123,0:0:0:123,0:4374,0:-378.629,-37.0267,0,-378.629,-37.0267,-378.629	1/1:166:0,166,0:0:0:166,0:5893,0:-521.445,-49.971,0,-521.445,-49.971,-521.445	1/1:168:0,165,3:0:0:165,3:5777,100:-500.765,-49.67,0,-492.674,-41.2452,-491.771	1/2:130:0,82,48:0:0:82,48:2891,1687:-361.777,-137.589,-112.904,-224.534,0,-210.085	1/1:127:0,127,0:0:0:127,0:4449,0:-394.794,-38.2308,0,-394.794,-38.2308,-394.794	1/1:45:0,45,0:0:0:45,0:1598,0:-141.293,-13.5464,0,-141.293,-13.5464,-141.293	1/2:106:0,61,44:0:0:61,44:2157,1581:-295.852,-128.866,-110.503,-167.044,0,-153.799	1/2:61:0,34,27:0:0:34,27:1200,954:-171.634,-77.964,-67.729,-94.0173,0,-85.8895	1/1:49:0,49,0:0:0:49,0:1726,0:-151.887,-14.7505,0,-151.887,-14.7505,-151.887	1/2:72:0,38,34:0:0:38,34:1352,1200:-206.416,-98.0307,-86.5915,-108.737,0,-98.5017	1/1:58:0,57,0:0:0:57,0:1977,0:-173.35,-17.1587,0,-173.35,-17.1587,-173.35	1/1:29:0,29,0:0:0:29,0:1033,0:-89.725,-8.72987,0,-89.725,-8.72987,-89.725	1/2:16:0,10,6:0:0:10,6:360,214:-46.1047,-17.7939,-14.7836,-28.664,0,-26.8578	1/2:18:0,11,7:0:0:11,7:395,238:-49.7935,-19.5493,-16.238,-30.5828,0,-28.4755	1/2:310:0,161,148:0:0:161,148:5665,5209:-877.167,-423.933,-375.467,-453.227,0,-408.674	1/1:200:0,199,0:0:0:199,0:7050,0:-620.378,-59.905,0,-620.378,-59.905,-620.378	1/2:380:0,127,252:0:0:127,252:4468,8923:-1085.49,-726.681,-688.45,-358.871,0,-283.011	1/2:264:0,147,117:0:0:147,117:5212,4156:-756.094,-338.778,-294.527,-417.668,0,-382.447	1/1:132:0,132,0:0:0:132,0:4674,0:-410.911,-39.736,0,-410.911,-39.736,-410.911	1/1:109:0,109,0:0:0:109,0:3861,0:-339.035,-32.8123,0,-339.035,-32.8123,-339.035	1/2:356:0,232,122:0:0:232,122:8204,4282:-1007.42,-348.365,-278.526,-659.083,0,-622.357	1/1:394:0,393,0:0:0:393,0:13876,0:-1215.5,-118.305,0,-1215.5,-118.305,-1215.5	1/1:22:0,22,0:0:0:22,0:787,0:-69.486,-6.62266,0,-69.486,-6.62266,-69.486	1/1:363:0,362,0:0:0:362,0:12807,0:-1138.67,-108.973,0,-1138.67,-108.973,-1138.67	1/2:202:0,99,103:0:0:99,103:3471,3647:-572.328,-297.384,-267.582,-275.291,0,-244.285	1/1:246:0,241,0:0:0:241,0:8494,0:-749.925,-72.5482,0,-749.925,-72.5482,-749.925	1/2:6:0,4,2:0:0:4,2:144,72:-17.701,-6.23466,-5.03054,-11.8236,0,-11.2216	1/1:44:0,44,0:0:0:44,0:1559,0:-137.189,-13.2453,0,-137.189,-13.2453,-137.189	1/1:5:0,5,0:0:0:5,0:179,0:-15.9394,-1.50515,0,-15.9394,-1.50515,-15.9394	1/1:10:0,10,0:0:0:10,0:357,0:-31.4142,-3.0103,0,-31.4142,-3.0103,-31.4142	1/1:39:0,39,0:0:0:39,0:1386,0:-121.065,-11.7402,0,-121.065,-11.7402,-121.065	1/2:209:0,94,111:0:0:94,111:3326,3944:-588.01,-321.353,-293.056,-266.662,0,-233.247	1/2:142:0,79,63:0:0:79,63:2771,2196:-398.053,-178.925,-155.143,-219.474,0,-200.509	1/1:47:0,47,0:0:0:47,0:1657,0:-143.731,-14.1484,0,-143.731,-14.1484,-143.731	1/1:6:0,6,0:0:0:6,0:203,0:-17.9841,-1.80618,0,-17.9841,-1.80618,-17.9841	1/1:247:0,246,0:0:0:246,0:8684,0:-762.226,-74.0534,0,-762.226,-74.0534,-762.226	1/1:28:0,28,0:0:0:28,0:1005,0:-88.7504,-8.42884,0,-88.7504,-8.42884,-88.7504	1/1:366:0,364,0:0:0:364,0:12857,0:-1126.16,-109.575,0,-1126.16,-109.575,-1126.16	1/1:49:0,49,0:0:0:49,0:1738,0:-153.009,-14.7505,0,-153.009,-14.7505,-153.009	1/1:58:0,58,0:0:0:58,0:2071,0:-183.635,-17.4597,0,-183.635,-17.4597,-183.635	1/2:155:0,90,65:0:0:90,65:3179,2313:-442.28,-188.8,-161.707,-253.832,0,-234.265	1/2:180:0,98,82:0:0:98,82:3465,2896:-508.214,-236.125,-206.624,-272.437,0,-247.752	1/1:327:0,325,1:0:0:325,1:11511,33:-1018.53,-97.8348,0,-1015.86,-95.1789,-1015.56	1/1:196:0,196,0:0:0:196,0:6927,0:-612.075,-59.0019,0,-612.075,-59.0019,-612.075	1/2:178:0,100,78:0:0:100,78:3510,2774:-507.454,-226.334,-196.231,-281.471,0,-257.99	1/1:266:0,265,0:0:0:265,0:9396,0:-836.014,-79.773,0,-836.014,-79.773,-836.014	1/2:20:0,9,11:0:0:9,11:320,382:-57.106,-31.3977,-28.6885,-26.0575,0,-22.7461	1/1:162:0,160,0:0:0:160,0:5679,0:-492.556,-48.1648,0,-492.556,-48.1648,-492.556	1/1:137:0,137,0:0:0:137,0:4845,0:-431.705,-41.2411,0,-431.705,-41.2411,-431.705	1/2:17:0,12,5:0:0:12,5:407,178:-46.862,-14.8592,-11.2469,-32.3509,0,-30.8458	1/2:269:0,148,120:0:0:148,120:5223,4197:-756.62,-341.514,-296.962,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chr11	12198178	.	G	T	32342.3	PASS	AB=0.502831;ABP=3.26849;AC=40;AF=0.212766;AN=188;AO=1874;CIGAR=1X;DP=8103;DPB=8103;DPRA=1.34156;EPP=3858.1;EPPR=13119.6;GTI=0;LEN=1;MEANALT=1.02273;MQM=53.6697;MQMR=56.2961;NS=94;NUMALT=1;ODDS=2.94913;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=66978;QR=222612;RO=6227;RPL=1849;RPP=3858.1;RPPR=13119.6;RPR=25;RUN=1;SAF=0;SAP=4072.35;SAR=1874;SRF=0;SRP=13524.8;SRR=6227;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:50:50,0:50:1779:0:0:0,-15.0515,-159.33	0/1:71:40,31:40:1436:31:1112:-78.7496,0,-107.027	0/0:261:261,0:261:9312:0:0:0,-78.5688,-834.916	0/1:289:186,103:186:6642:103:3659:-241.864,0,-509.779	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.56	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.4232	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.394	0/0:158:158,0:158:5668:0:0:0,-47.5627,-509	0/1:91:42,49:42:1496:49:1756:-130.12,0,-106.863	0/0:97:97,0:97:3480:0:0:0,-29.1999,-313.001	0/0:43:43,0:43:1527:0:0:0,-12.9443,-137.601	0/1:97:50,47:50:1796:47:1662:-119.917,0,-132.068	0/1:67:33,34:33:1184:34:1220:-89.6558,0,-86.5942	0/0:28:28,0:28:1008:0:0:0,-8.42884,-90.9944	0/1:66:31,35:31:1112:35:1260:-93.6313,0,-80.3939	0/0:47:47,0:47:1679:0:0:0,-14.1484,-151.111	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.4761	0/1:24:12,12:12:432:12:432:-31.6909,0,-31.9594	0/1:43:24,19:24:864:19:680:-48.2461,0,-64.7319	0/1:124:63,61:63:2235:61:2192:-160.07,0,-163.426	0/0:176:176,0:176:6291:0:0:0,-52.9813,-565.605	0/1:158:50,108:50:1779:108:3863:-299.05,0,-112.675	0/1:79:34,45:34:1220:45:1620:-121.372,0,-86.3113	0/0:75:74,1:74:2652:1:36:0,-19.0562,-234.162	0/0:65:65,0:65:2314:0:0:0,-19.5669,-207.592	0/1:238:113,125:113:4035:125:4463:-328.675,0,-291.588	0/0:288:286,2:286:10232:2:72:0,-79.8696,-911.337	0/0:25:25,0:25:854:0:0:0,-7.52575,-76.9996	0/0:182:182,0:182:6482:0:0:0,-54.7875,-582.962	0/1:154:79,75:79:2828:75:2664:-192.249,0,-207.386	0/0:77:77,0:77:2756:0:0:0,-23.1793,-247.979	0/1:12:6,6:6:212:6:216:-16.1501,0,-15.7347	0/0:27:27,0:27:968:0:0:0,-8.12781,-86.6103	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7106	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5264	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.127	0/1:183:105,77:105:3768:77:2753:-192.352,0,-283.857	0/1:170:75,95:75:2672:95:3393:-253.442,0,-188.758	0/0:59:59,0:59:2124:0:0:0,-17.7608,-190.602	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7648	0/0:97:97,0:97:3488:0:0:0,-29.1999,-313.749	0/0:31:31,0:31:1103:0:0:0,-9.33193,-99.5334	0/0:116:116,0:116:4156:0:0:0,-34.9195,-373.862	0/0:45:45,0:45:1612:0:0:0,-13.5463,-144.936	0/0:61:61,0:61:2196:0:0:0,-18.3628,-197.714	0/1:155:68,87:68:2436:87:3116:-233.58,0,-172.711	0/1:143:85,58:85:3018:58:2074:-142.713,0,-227.993	0/0:177:175,2:175:6235:2:72:0,-46.4505,-553.71	0/0:141:141,0:141:5034:0:0:0,-42.4452,-452.823	0/1:57:28,29:28:1008:29:1021:-74.9496,0,-73.8085	0/0:107:107,0:107:3827:0:0:0,-32.2102,-344.221	0/1:12:8,4:8:284:4:144:-9.69166,0,-22.2745	0/0:140:140,0:140:5016:0:0:0,-42.1442,-449.914	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4634	0/1:8:4,4:4:144:4:144:-10.7715,0,-10.8917	0/1:161:67,94:67:2395:94:3342:-250.846,0,-166.454	0/1:53:24,29:24:864:29:1029:-76.4487,0,-62.028	0/1:8:2,6:2:72:6:216:-17.3619,0,-4.42657	0/0:16:16,0:16:567:0:0:0,-4.81648,-51.3454	0/0:33:33,0:33:1164:0:0:0,-9.93399,-104.989	0/1:73:27,46:27:972:46:1652:-126.874,0,-65.6893	0/1:8:2,6:2:72:6:216:-17.368,0,-4.42764	0/1:108:52,56:52:1868:56:2004:-147.634,0,-135.797	0/0:74:74,0:74:2648:0:0:0,-22.2762,-237.329	0/1:52:32,20:32:1144:20:720:-49.3554,0,-87.5659	0/0:95:95,0:95:3395:0:0:0,-28.5978,-305.279	0/1:141:86,55:86:3083:55:1968:-134.8,0,-234.546	0/0:138:134,4:134:4780:4:144:0,-28.2381,-415.752	0/1:42:20,22:20:720:22:792:-57.4885,0,-52.4546	0/0:102:102,0:102:3656:0:0:0,-30.7051,-327.171	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.912	0/1:21:12,9:12:432:9:324:-22.4886,0,-32.8947	0/0:176:175,0:175:6233:0:0:0,-52.6802,-559.584	0/0:135:135,0:135:4812:0:0:0,-40.639,-432.532	0/0:99:99,0:99:3520:0:0:0,-29.802,-316.073	0/1:206:104,102:104:3736:102:3643:-265.575,0,-274.295	0/0:106:106,0:106:3796:0:0:0,-31.9092,-338.566	0/1:62:26,36:26:932:36:1292:-97.5929,0,-65.3378	0/1:19:11,8:11:396:8:288:-20.4818,0,-30.2009	0/1:101:28,73:28:996:73:2593:-201.99,0,-59.5052	0/0:106:106,0:106:3775:0:0:0,-31.9092,-338.581	0/0:161:161,0:161:5768:0:0:0,-48.4658,-518.867	0/1:70:36,34:36:1280:34:1220:-88.1629,0,-94.2949	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.306	0/0:46:46,0:46:1648:0:0:0,-13.8474,-148.497	0/1:124:63,61:63:2255:61:2188:-159.239,0,-165.758	0/0:24:24,0:24:860:0:0:0,-7.22472,-77.5404	0/1:65:36,29:36:1279:29:1040:-73.9181,0,-95.3583	0/0:63:63,0:63:2256:0:0:0,-18.9649,-202.992	0/0:31:31,0:31:1108:0:0:0,-9.33193,-99.9787	0/1:93:55,38:55:1967:38:1355:-93.6863,0,-147.902	0/1:61:24,37:24:864:37:1328:-101.372,0,-59.6151	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2642	0/0:85:85,0:85:3045:0:0:0,-25.5875,-274.108
chr11	12198201	.	GACC	AACT,GACT	172255	PASS	AB=0.495544,0.502025;ABP=3.6489,3.14224;AC=148,40;AF=0.787234,0.212766;AN=188;AO=6198,1871;CIGAR=1X2M1X,3M1X;DP=8087;DPB=8088;DPRA=0,1.29928;EPP=13461.8,4065.84;EPPR=7.35324;GTI=0;LEN=4,1;MEANALT=1.62766,2.17391;MQM=56.2291,53.7253;MQMR=60;NS=94;NUMALT=2;ODDS=2.20753;PAIRED=0,0;PAIREDR=0;PAO=4,0;PQA=104,0;PQR=0;PRO=0;QA=219363,67042;QR=72;RO=2;RPL=6198,1871;RPP=13461.8,4065.84;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=0,0;SAP=13461.8,4065.84;SAR=6198,1871;SRF=0;SRP=7.35324;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:50:0,49,1:0:0:49,1:1737,36:-155.271,-14.7505,0,-152.333,-11.4532,-152.032	1/2:71:0,39,32:0:0:39,32:1385,1144:-205.113,-93.3728,-81.6327,-112.094,0,-102.461	1/1:259:0,259,0:0:0:259,0:9185,0:-823.558,-77.9668,0,-823.558,-77.9668,-823.558	1/2:293:0,188,104:0:0:188,104:6660,3729:-844.393,-303.281,-246.688,-541.108,0,-509.801	1/1:49:0,49,0:0:0:49,0:1748,0:-157.377,-14.7505,0,-157.377,-14.7505,-157.377	1/1:15:0,15,0:0:0:15,0:534,0:-48.2439,-4.51545,0,-48.2439,-4.51545,-48.2439	1/1:54:0,54,0:0:0:54,0:1907,0:-171.785,-16.2556,0,-171.785,-16.2556,-171.785	1/1:162:0,162,0:0:0:162,0:5696,0:-511.684,-48.7669,0,-511.684,-48.7669,-511.684	1/2:91:0,42,49:0:0:42,49:1472,1760:-262.246,-142.971,-130.328,-119.627,0,-104.877	1/1:99:0,99,0:0:0:99,0:3473,0:-312.481,-29.802,0,-312.481,-29.802,-312.481	1/1:41:0,41,0:0:0:41,0:1452,0:-130.824,-12.3422,0,-130.824,-12.3422,-130.824	1/2:97:0,50,47:0:0:50,47:1768,1688:-279.634,-136.193,-121.142,-143.794,0,-129.646	1/2:67:0,33,34:0:0:33,34:1159,1224:-193.24,-99.0114,-89.0774,-94.5817,0,-84.3467	1/1:28:0,28,0:0:0:28,0:986,0:-88.9669,-8.42884,0,-88.9669,-8.42884,-88.9669	1/2:65:0,30,35:0:0:30,35:1079,1260:-190.867,-102.963,-93.9323,-88.2628,0,-77.7268	1/1:48:0,46,2:0:0:46,2:1579,72:-141.825,-13.8474,0,-135.95,-7.61272,-135.348	1/1:29:0,29,0:0:0:29,0:1022,0:-92.0933,-8.72987,0,-92.0933,-8.72987,-92.0933	1/2:24:0,12,12:0:0:12,12:425,432:-69.8878,-35.3032,-31.6909,-34.9399,0,-31.3276	1/2:42:0,23,19:0:0:23,19:793,683:-119.765,-55.7365,-48.8128,-64.3793,0,-58.6597	1/2:123:0,62,61:0:0:62,61:2179,2186:-355.2,-178.5,-159.836,-177.055,0,-158.692	1/1:175:0,175,0:0:0:175,0:6194,0:-556.865,-52.6803,0,-556.865,-52.6803,-556.865	1/2:158:0,50,108:0:0:50,108:1763,3854:-456.727,-313.32,-298.268,-143.76,0,-111.249	1/2:81:0,36,44:0:0:36,44:1274,1583:-232.027,-128.273,-117.436,-103.755,0,-90.5093	1/1:78:0,77,1:0:0:77,1:2724,36:-244.13,-23.1793,0,-241.262,-19.9593,-240.961	1/1:66:0,66,0:0:0:66,0:2356,0:-211.43,-19.868,0,-211.43,-19.868,-211.43	1/2:237:0,113,123:0:0:113,123:3986,4416:-682.742,-358.278,-324.262,-324.464,0,-287.438	1/1:290:0,287,2:0:0:287,2:10154,72:-911.467,-86.3956,0,-905.602,-80.5202,-905	1/1:23:0,23,0:0:0:23,0:827,0:-74.5386,-6.92369,0,-74.5386,-6.92369,-74.5386	1/1:183:0,183,0:0:0:183,0:6475,0:-582.382,-55.0885,0,-582.382,-55.0885,-582.382	1/2:153:0,81,71:0:0:81,71:2871,2552:-439.372,-206.515,-182.131,-232.858,0,-211.485	1/1:76:0,76,0:0:0:76,0:2693,0:-242.316,-22.8783,0,-242.316,-22.8783,-242.316	1/2:12:0,6,6:0:0:6,6:206,216:-34.6527,-17.9563,-16.1501,-17.0475,0,-15.2413	1/1:28:0,28,0:0:0:28,0:988,0:-88.4082,-8.42884,0,-88.4082,-8.42884,-88.4082	1/1:10:0,10,0:0:0:10,0:360,0:-32.7106,-3.0103,0,-32.7106,-3.0103,-32.7106	1/1:15:0,15,0:0:0:15,0:526,0:-47.6246,-4.51545,0,-47.6246,-4.51545,-47.6246	1/1:36:0,36,0:0:0:36,0:1271,0:-114.48,-10.8371,0,-114.48,-10.8371,-114.48	1/2:182:0,103,79:0:0:103,79:3678,2844:-531.281,-231.732,-200.726,-299.907,0,-276.126	1/2:168:2,74,92:2:72:74,92:2623,3304:-475.537,-262.632,-246.231,-207.628,0,-185.808	1/1:56:0,56,0:0:0:56,0:1990,0:-178.668,-16.8577,0,-178.668,-16.8577,-178.668	1/1:5:0,5,0:0:0:5,0:167,0:-15.3531,-1.50515,0,-15.3531,-1.50515,-15.3531	1/1:98:0,98,0:0:0:98,0:3501,0:-314.926,-29.5009,0,-314.926,-29.5009,-314.926	1/1:31:0,31,0:0:0:31,0:1093,0:-98.6334,-9.33193,0,-98.6334,-9.33193,-98.6334	1/1:118:0,115,0:0:0:115,0:4056,0:-364.605,-34.6185,0,-364.605,-34.6185,-364.605	1/1:43:0,43,0:0:0:43,0:1518,0:-136.802,-12.9443,0,-136.802,-12.9443,-136.802	1/1:59:0,59,0:0:0:59,0:2098,0:-188.907,-17.7608,0,-188.907,-17.7608,-188.907	1/2:151:0,67,84:0:0:67,84:2368,3024:-439.376,-246.64,-226.471,-193.092,0,-167.805	1/2:145:0,85,59:0:0:85,59:2992,2097:-412.909,-170.093,-144.505,-242.93,0,-225.169	1/1:178:0,176,2:0:0:176,2:6225,72:-559.324,-52.9813,0,-553.454,-46.7515,-552.852	1/1:140:0,140,0:0:0:140,0:4934,0:-443.923,-42.1442,0,-443.923,-42.1442,-443.923	1/2:58:0,30,28:0:0:30,28:1070,1008:-169.562,-82.4434,-73.4125,-87.476,0,-79.0472	1/1:107:0,107,0:0:0:107,0:3817,0:-343.395,-32.2102,0,-343.395,-32.2102,-343.395	1/2:12:0,8,4:0:0:8,4:287,144:-35.4923,-12.0999,-9.69165,-23.7516,0,-22.5475	1/1:138:0,138,0:0:0:138,0:4877,0:-437.778,-41.5421,0,-437.778,-41.5421,-437.778	1/1:24:0,24,0:0:0:24,0:855,0:-77.2508,-7.22472,0,-77.2508,-7.22472,-77.2508	1/2:8:0,5,3:0:0:5,3:179,108:-23.6233,-9.14675,-7.6416,-14.8341,0,-13.931	1/2:161:0,67,93:0:0:67,93:2393,3325:-464.382,-269.672,-249.503,-194.714,0,-166.718	1/2:54:0,25,29:0:0:25,29:882,1025:-155.1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chr11	13124500	.	TTTTTGTTTCTCTTTTCTG	TGCTTTTGTTTCTCTTTTCTT,TGCTTTTGTTTCTCTTTCTT	244272	PASS	AB=0.481854,0.500838;ABP=18.3779,3.04304;AC=148,40;AF=0.787234,0.212766;AN=188;AO=9048,2704;CIGAR=1M2I17M1X,1M2I11M1D5M1X;DP=11986;DPB=13101.4;DPRA=0,1.35076;EPP=19650.5,5874.67;EPPR=5.18177;GTI=0;LEN=21,20;MEANALT=3.65957,4.30612;MQM=59.9794,59.4449;MQMR=60;NS=94;NUMALT=2;ODDS=2.37168;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=314874,93360;QR=34;RO=1;RPL=0,0;RPP=19650.5,5874.67;RPPR=5.18177;RPR=9048,2704;RUN=1,1;SAF=0,0;SAP=19650.5,5874.67;SAR=9048,2704;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:28:0,28,0:0:0:28,0:981,0:-88.601,-8.42884,0,-88.601,-8.42884,-88.601	1/2:179:0,84,94:0:0:84,94:2903,3236:-498.617,-262.76,-237.474,-235.842,0,-207.545	1/1:160:0,151,0:0:0:151,0:5289,0:-475.814,-45.4555,0,-475.814,-45.4555,-475.814	1/2:287:0,131,147:0:0:131,147:4569,5052:-781.764,-410.166,-370.732,-371.627,0,-327.376	1/1:66:0,64,0:0:0:64,0:2231,0:-200.71,-19.2659,0,-200.71,-19.2659,-200.71	1/1:78:0,78,0:0:0:78,0:2706,0:-243.782,-23.4803,0,-243.782,-23.4803,-243.782	1/1:218:0,211,0:0:0:211,0:7352,0:-661.369,-63.5173,0,-661.369,-63.5173,-661.369	1/1:172:0,167,0:0:0:167,0:5792,0:-521.068,-50.272,0,-521.068,-50.272,-521.068	1/2:83:0,48,32:0:0:48,32:1652,1121:-225.334,-91.1692,-76.7198,-134.155,0,-124.522	1/1:145:0,143,0:0:0:143,0:4940,0:-444.439,-43.0473,0,-444.439,-43.0473,-444.439	1/1:81:0,80,0:0:0:80,0:2754,0:-247.821,-24.0824,0,-247.821,-24.0824,-247.821	1/2:111:0,55,55:0:0:55,55:1919,1881:-308.629,-152.548,-135.991,-156.008,0,-139.452	1/2:108:0,49,58:0:0:49,58:1701,2001:-300.708,-162.434,-147.683,-138.261,0,-120.801	1/1:82:0,79,0:0:0:79,0:2711,0:-243.889,-23.7814,0,-243.889,-23.7814,-243.889	1/2:90:0,41,44:0:0:41,44:1448,1519:-241.323,-123.398,-111.056,-117.932,0,-104.686	1/1:67:0,66,0:0:0:66,0:2255,0:-202.846,-19.868,0,-202.846,-19.868,-202.846	1/1:82:0,81,0:0:0:81,0:2812,0:-252.958,-24.3834,0,-252.958,-24.3834,-252.958	1/2:82:0,39,42:0:0:39,42:1339,1443:-225.958,-117.236,-105.496,-108.783,0,-96.1393	1/2:62:0,29,32:0:0:29,32:1023,1132:-175.494,-92.195,-83.4652,-83.2923,0,-73.6593	1/2:314:0,166,145:0:0:166,145:5777,4980:-873.42,-403.685,-353.714,-469.722,0,-426.073	1/1:146:0,143,0:0:0:143,0:4977,0:-447.736,-43.0473,0,-447.736,-43.0473,-447.736	1/2:140:0,41,91:0:0:41,91:1434,3165:-373.925,-257.263,-244.921,-116.673,0,-89.2795	1/2:159:0,77,77:0:0:77,77:2693,2619:-431.491,-212.402,-189.223,-219.075,0,-195.896	1/1:199:0,192,1:0:0:192,1:6727,36:-605.157,-57.7978,0,-602.22,-54.8603,-601.919	1/1:116:0,110,0:0:0:110,0:3846,0:-346.009,-33.1133,0,-346.009,-33.1133,-346.009	1/2:351:0,174,170:0:0:174,170:6110,5840:-971.252,-473.972,-421.592,-497.276,0,-446.101	1/1:230:0,225,1:0:0:225,1:7884,36:-709.24,-67.7318,0,-706.303,-64.7943,-706.002	1/1:57:0,56,0:0:0:56,0:1936,0:-174.155,-16.8577,0,-174.155,-16.8577,-174.155	1/1:298:0,291,2:0:0:291,2:10156,72:-913.637,-87.5997,0,-907.762,-81.722,-907.16	1/2:223:0,124,98:0:0:124,98:4286,3385:-623.162,-274.913,-237.586,-348.235,0,-318.734	1/1:176:0,173,0:0:0:173,0:6067,0:-545.783,-52.0782,0,-545.783,-52.0782,-545.783	1/2:14:0,6,8:0:0:6,8:197,279:-38.9475,-23.0393,-21.2331,-16.2451,0,-13.8369	1/1:22:0,21,0:0:0:21,0:732,0:-65.8421,-6.32163,0,-65.8421,-6.32163,-65.8421	1/1:8:0,7,0:0:0:7,0:239,0:-21.4939,-2.10721,0,-21.4939,-2.10721,-21.4939	1/1:11:0,11,0:0:0:11,0:388,0:-35.2574,-3.31133,0,-35.2574,-3.31133,-35.2574	1/1:12:0,12,0:0:0:12,0:428,0:-38.8588,-3.61236,0,-38.8588,-3.61236,-38.8588	1/2:299:0,141,156:0:0:141,156:4893,5351:-831.868,-434.125,-391.68,-397.797,0,-350.836	1/2:258:0,140,115:0:0:140,115:4917,4018:-727.002,-326.809,-284.664,-400.232,0,-365.614	1/1:82:0,78,0:0:0:78,0:2735,0:-246.042,-23.4803,0,-246.042,-23.4803,-246.042	1/1:9:0,9,0:0:0:9,0:316,0:-28.7789,-2.70927,0,-28.7789,-2.70927,-28.7789	1/1:175:0,171,0:0:0:171,0:5937,0:-534.134,-51.4761,0,-534.134,-51.4761,-534.134	1/1:46:0,44,0:0:0:44,0:1483,0:-133.397,-13.2453,0,-133.397,-13.2453,-133.397	1/1:183:0,180,2:0:0:180,2:6209,72:-558.561,-54.1854,0,-552.686,-48.3106,-552.084	1/1:107:1,105,0:1:34:105,0:3650,0:-325.325,-28.8352,0,-325.626,-31.6082,-328.384	1/1:94:0,91,0:0:0:91,0:3185,0:-286.534,-27.3937,0,-286.534,-27.3937,-286.534	1/2:171:0,87,80:0:0:87,80:3018,2743:-468.029,-222.715,-196.526,-245.345,0,-221.262	1/2:134:0,66,65:0:0:66,65:2318,2229:-369.607,-180.942,-161.074,-188.653,0,-169.086	1/1:239:0,234,1:0:0:234,1:8109,36:-729.483,-70.441,0,-726.546,-67.5036,-726.245	1/1:170:0,162,0:0:0:162,0:5698,0:-512.609,-48.7669,0,-512.609,-48.7669,-512.609	1/2:168:0,79,85:0:0:79,85:2732,2921:-459.174,-237.177,-213.395,-221.994,0,-196.407	1/1:206:0,205,0:0:0:205,0:7135,0:-641.944,-61.7112,0,-641.944,-61.7112,-641.944	1/2:8:0,5,3:0:0:5,3:176,108:-23.4951,-9.17208,-7.66693,-14.6799,0,-13.7768	1/1:206:0,206,0:0:0:206,0:7188,0:-646.973,-62.0122,0,-646.973,-62.0122,-646.973	1/1:86:0,85,0:0:0:85,0:3011,0:-270.863,-25.5876,0,-270.863,-25.5876,-270.863	1/2:26:0,15,11:0:0:15,11:536,383:-75.1994,-31.4919,-26.9765,-44.0594,0,-40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chr11	14334494	.	G	A	24820.5	PASS	AB=0.423738;ABP=197.095;AC=34;AF=0.180851;AN=188;AO=1672;CIGAR=1X;DP=15214;DPB=15214;DPRA=1.28989;EPP=3633.71;EPPR=28090.4;GTI=3;LEN=1;MEANALT=1.10638;MQM=59.9264;MQMR=59.9832;NS=94;NUMALT=1;ODDS=1.93081;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=59925;QR=483088;RO=13532;RPL=0;RPP=3633.71;RPPR=28098.9;RPR=1672;RUN=1;SAF=1672;SAP=3633.71;SAR=0;SRF=13531;SRP=29378.7;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/1:63:41,22:41:1453:22:792:-52.6408,0,-112.099	0/0:114:114,0:114:4088:0:0:0,-34.3174,-368.083	0/1:77:27,50:27:953:50:1792:-138.383,0,-62.8994	0/0:39:39,0:39:1400:0:0:0,-11.7402,-126.299	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/0:118:117,1:117:4173:1:36:0,-31.9233,-372.154	0/1:47:28,19:28:1008:19:684:-47.7419,0,-76.8879	0/0:43:42,1:42:1481:1:36:0,-9.34601,-129.984	0/0:443:443,0:443:15819:0:0:0,-133.356,-1423.41	0/1:99:51,48:51:1832:48:1724:-125.643,0,-135.359	0/1:59:31,28:31:1112:28:1004:-72.9151,0,-82.6306	0/0:79:79,0:79:2818:0:0:0,-23.7814,-253.858	0/1:52:18,34:18:644:34:1224:-94.8135,0,-42.637	0/0:71:71,0:71:2528:0:0:0,-21.3731,-227.764	0/0:38:38,0:38:1368:0:0:0,-11.4391,-123.421	0/1:33:12,21:12:428:21:743:-57.2498,0,-28.9248	0/1:126:102,24:102:3633:24:860:-39.7921,0,-289.245	0/1:51:22,29:22:792:29:1040:-78.5618,0,-56.2531	0/0:76:76,0:76:2708:0:0:0,-22.8783,-243.965	0/1:37:13,24:13:464:24:860:-66.5837,0,-30.9594	0/1:42:25,17:25:892:17:604:-42.0431,0,-67.9564	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:45:45,0:45:1600:0:0:0,-13.5463,-144.29	0/1:98:54,44:54:1936:44:1572:-112.271,0,-145.015	0/0:112:112,0:112:4020:0:0:0,-33.7154,-361.988	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.716	0/1:108:57,51:57:2006:51:1832:-132.65,0,-148.299	0/0:43:43,0:43:1540:0:0:0,-12.9443,-138.893	0/0:408:407,1:407:14589:1:36:0,-119.222,-1309.15	0/0:388:387,0:387:13880:0:0:0,-116.499,-1248.61	0/0:1070:1069,1:1069:38178:1:36:0,-318.504,-3431.14	0/0:1688:1683,2:1683:59977:2:72:0,-500.759,-5388.88	0/0:1157:1156,0:1156:41286:0:0:0,-347.991,-3713.99	0/1:151:83,68:83:2964:68:2448:-175.033,0,-221.538	0/1:79:29,50:29:1040:50:1774:-136.088,0,-70.133	0/0:381:381,0:381:13641:0:0:0,-114.692,-1227.45	0/0:639:639,0:639:22794:0:0:0,-192.358,-2050.87	0/0:36:36,0:36:1288:0:0:0,-10.8371,-115.906	0/0:196:196,0:196:7001:0:0:0,-59.0019,-630.154	0/0:82:82,0:82:2914:0:0:0,-24.6845,-262.493	0/0:34:34,0:34:1203:0:0:0,-10.235,-108.575	0/0:33:33,0:33:1176:0:0:0,-9.93399,-106.148	0/1:49:37,12:37:1316:12:432:-24.4707,0,-103.991	0/1:71:26,45:26:932:45:1605:-123.365,0,-62.8257	0/0:106:106,0:106:3758:0:0:0,-31.9092,-338.419	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/1:57:32,25:32:1144:25:896:-63.8016,0,-86.1108	0/0:12:12,0:12:419:0:0:0,-3.61236,-38.0427	0/0:341:335,5:335:11897:5:169:0,-87.1648,-1055.05	0/0:74:74,0:74:2660:0:0:0,-22.2762,-239.645	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:203:193,9:193:6881:9:324:0,-31.662,-589.855	0/1:81:52,29:52:1856:29:1025:-68.1773,0,-142.936	0/1:7:3,4:3:108:4:144:-11.2064,0,-7.96796	0/0:188:188,0:188:6733:0:0:0,-56.5936,-606.042	0/0:707:706,0:706:25148:0:0:0,-212.527,-2262.25	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.416	0/1:88:38,50:38:1360:50:1786:-134.532,0,-96.21	0/1:303:215,88:215:7693:88:3153:-192.781,0,-601.191	0/1:58:24,34:24:864:34:1224:-92.9789,0,-60.6228	0/0:100:99,1:99:3540:1:36:0,-26.5047,-315.211	0/1:41:20,21:20:716:21:752:-55.664,0,-52.4255	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6706	0/1:56:23,33:23:820:33:1188:-89.5924,0,-57.2648	0/0:112:110,2:110:3929:2:72:0,-26.8786,-346.965	0/1:337:302,35:302:10798:35:1260:-12.2584,0,-870.276	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.533	0/0:43:43,0:43:1539:0:0:0,-12.9443,-138.802	0/0:212:206,5:206:7337:5:180:0,-47.3251,-643.828	0/0:126:126,0:126:4462:0:0:0,-37.9298,-401.752	0/0:58:57,1:57:2029:1:36:0,-13.8615,-179.282	0/0:112:112,0:112:4008:0:0:0,-33.7154,-360.908	0/1:68:22,46:22:792:46:1648:-128.139,0,-51.1356	0/0:67:67,0:67:2393:0:0:0,-20.169,-215.625	0/1:52:25,27:25:900:27:964:-71.4233,0,-65.6675	0/0:303:289,14:289:10325:14:496:0,-46.2378,-884.193	0/1:60:20,40:20:720:40:1436:-111.476,0,-47.067	0/0:53:53,0:53:1885:0:0:0,-15.9546,-169.927	0/0:86:86,0:86:3088:0:0:0,-25.8886,-278.147	0/1:46:22,24:22:788:24:860:-63.8745,0,-57.3928	0/0:50:50,0:50:1796:0:0:0,-15.0515,-161.922	0/0:18:18,0:18:631:0:0:0,-5.41854,-57.1157	0/1:86:47,39:47:1676:39:1391:-99.5997,0,-125.239	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/1:67:33,34:33:1173:34:1224:-90.298,0,-85.7065	0/0:55:55,0:55:1968:0:0:0,-16.5566,-177.395	0/0:484:484,0:484:17280:0:0:0,-145.699,-1554.83	0/1:1123:659,463:659:23467:463:16619:-1157.24,0,-1773.3	0/1:70:20,50:20:720:50:1800:-141.21,0,-44.0567	0/0:25:25,0:25:888:0:0:0,-7.52575,-80.1769	0/0:72:71,1:71:2540:1:36:0,-18.0759,-225.253
chr11	14334719	.	G	A	45279	PASS	AB=0.515226;ABP=13.7224;AC=40;AF=0.212766;AN=188;AO=2753;CIGAR=1X;DP=11305;DPB=11305;DPRA=1.3158;EPP=5963.71;EPPR=18525.7;GTI=0;LEN=1;MEANALT=1.04167;MQM=59.9491;MQMR=59.9338;NS=94;NUMALT=1;ODDS=2.6128;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96616;QR=302577;RO=8550;RPL=2;RPP=5963.71;RPPR=18517;RPR=2751;RUN=1;SAF=0;SAP=5981.07;SAR=2753;SRF=1;SRP=18560.4;SRR=8549;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/1:242:90,152:90:3190:152:5379:-411.397,0,-214.286	0/0:115:115,0:115:4116:0:0:0,-34.6184,-370.625	0/1:251:135,116:135:4789:116:4068:-290.75,0,-355.608	0/0:130:130,0:130:4597:0:0:0,-39.1339,-413.894	0/0:123:123,0:123:4400:0:0:0,-37.0267,-396.173	0/0:215:215,0:215:7648:0:0:0,-64.7214,-687.155	0/0:190:188,2:188:6660:2:72:0,-50.359,-592.642	0/1:140:66,74:66:2335:74:2587:-190.935,0,-168.217	0/0:164:164,0:164:5814:0:0:0,-49.3689,-523.374	0/0:62:62,0:62:2208:0:0:0,-18.6639,-198.985	0/1:76:36,40:36:1217:40:1355:-99.3611,0,-86.9475	0/1:69:34,35:34:1190:35:1210:-88.4304,0,-86.6324	0/0:75:75,0:75:2623:0:0:0,-22.5772,-236.315	0/1:52:32,20:32:1120:20:702:-47.8489,0,-85.4513	0/0:46:46,0:46:1610:0:0:0,-13.8474,-145.185	0/0:90:89,1:89:3135:1:36:0,-23.4944,-278.781	0/1:69:34,35:34:1199:35:1195:-87.0762,0,-87.4437	0/1:55:36,19:36:1271:19:654:-42.6234,0,-98.113	0/1:206:92,114:92:3246:114:3968:-295.28,0,-230.349	0/0:226:226,0:226:8030:0:0:0,-68.0328,-722.522	0/1:96:31,65:31:1093:65:2318:-179.981,0,-69.7788	0/1:87:36,51:36:1251:51:1801:-136.182,0,-86.6989	0/0:46:46,0:46:1635:0:0:0,-13.8474,-147.438	0/0:95:95,0:95:3313:0:0:0,-28.5978,-298.388	0/1:389:183,206:183:6535:206:7241:-534.651,0,-471.13	0/0:255:255,0:255:9038:0:0:0,-76.7626,-813.4	0/0:51:51,0:51:1796:0:0:0,-15.3525,-161.906	0/0:243:243,0:243:8594:0:0:0,-73.1503,-773.465	0/1:155:92,63:92:3244:63:2183:-150.072,0,-245.52	0/0:147:147,0:147:5240:0:0:0,-44.2514,-471.735	0/1:21:13,8:13:464:8:288:-19.9458,0,-35.7743	0/0:14:14,0:14:487:0:0:0,-4.21442,-44.1592	0/0:21:21,0:21:747:0:0:0,-6.32163,-67.5509	0/0:28:28,0:28:993:0:0:0,-8.42884,-89.4921	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.2608	0/1:242:119,123:119:4214:123:4246:-309.474,0,-306.595	0/1:261:126,135:126:4460:135:4763:-350.208,0,-322.983	0/0:80:80,0:80:2813:0:0:0,-24.0824,-253.408	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:208:208,0:208:7380:0:0:0,-62.6142,-664.247	0/0:46:46,0:46:1640:0:0:0,-13.8474,-147.889	0/0:126:126,0:126:4463:0:0:0,-37.9298,-401.794	0/0:199:198,1:198:7001:1:32:0,-56.7057,-626.958	0/0:83:83,0:83:2917:0:0:0,-24.9855,-262.277	0/1:119:57,62:57:2016:62:2206:-162.981,0,-145.888	0/1:165:80,85:80:2842:85:3011:-221.552,0,-206.348	0/0:254:251,2:251:8892:2:72:0,-69.6837,-793.431	0/0:119:119,0:119:4220:0:0:0,-35.8226,-379.979	0/1:169:75,94:75:2671:94:3313:-247.515,0,-189.761	0/0:88:86,2:86:3060:2:68:0,-20.0329,-269.17	0/1:27:13,14:13:464:14:496:-36.8464,0,-33.9697	0/0:175:175,0:175:6129:0:0:0,-52.6802,-551.715	0/0:59:59,0:59:2082:0:0:0,-17.7608,-187.642	0/1:37:22,15:22:779:15:528:-36.7133,0,-59.294	0/1:176:84,92:84:2941:92:3262:-240.82,0,-211.94	0/1:56:37,19:37:1293:19:664:-43.2246,0,-99.8085	0/1:16:8,8:8:284:8:288:-21.4509,0,-21.0869	0/0:44:44,0:44:1541:0:0:0,-13.2453,-138.98	0/0:74:74,0:74:2609:0:0:0,-22.2762,-235.056	0/1:104:63,41:63:2199:41:1413:-96.1556,0,-166.864	0/1:29:17,12:17:600:12:403:-27.861,0,-45.5993	0/1:266:127,139:127:4498:139:4901:-361.172,0,-324.916	0/0:173:172,1:172:6114:1:36:0,-48.4799,-546.764	0/1:87:50,37:50:1782:37:1305:-91.5598,0,-134.472	0/0:103:103,0:103:3671:0:0:0,-31.0061,-330.592	0/1:392:173,219:173:6092:219:7751:-579.617,0,-430.026	0/0:112:112,0:112:3977:0:0:0,-33.7154,-358.122	0/1:22:10,12:10:356:12:415:-31.0576,0,-25.7586	0/0:63:63,0:63:2240:0:0:0,-18.9649,-201.864	0/0:104:103,1:103:3645:1:36:0,-27.7088,-324.655	0/1:31:15,16:15:536:16:572:-42.4815,0,-39.2429	0/0:147:147,0:147:5183:0:0:0,-44.2514,-466.599	0/0:71:71,0:71:2504:0:0:0,-21.3731,-225.612	0/0:214:214,0:214:7559:0:0:0,-64.4204,-680.169	0/1:232:109,122:109:3879:122:4324:-319.46,0,-279.554	0/0:43:43,0:43:1516:0:0:0,-12.9443,-136.73	0/1:191:85,106:85:2999:106:3692:-274.987,0,-212.645	0/1:24:16,8:16:563:8:288:-19.0423,0,-43.7744	0/1:156:74,82:74:2596:82:2919:-215.974,0,-186.923	0/0:151:151,0:151:5403:0:0:0,-45.4555,-486.397	0/0:239:239,0:239:8482:0:0:0,-71.9462,-763.26	0/1:130:70,60:70:2481:60:2066:-147.075,0,-184.409	0/0:63:63,0:63:2204:0:0:0,-18.9649,-198.624	0/0:119:119,0:119:4192:0:0:0,-35.8226,-377.463	0/1:212:111,101:111:3922:101:3569:-257.601,0,-289.356	0/0:64:64,0:64:2235:0:0:0,-19.2659,-201.412	0/1:91:48,43:48:1681:43:1470:-105.196,0,-124.181	0/0:88:88,0:88:3122:0:0:0,-26.4906,-281.207	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.741	0/1:80:41,39:41:1446:39:1339:-96.7222,0,-106.08	0/1:97:38,59:38:1337:59:2039:-154.58,0,-91.428	0/0:123:121,2:121:4302:2:72:0,-30.19,-380.519	0/0:114:114,0:114:4030:0:0:0,-34.3174,-362.892
chr11	14517918	.	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chr11	16989641	.	A	C	87049.1	PASS	AB=0.428939;ABP=122.444;AC=147;AF=0.781915;AN=188;AO=4186;CIGAR=1X;DP=5758;DPB=5758;DPRA=6.86858;EPP=9092.79;EPPR=3407.88;GTI=4;LEN=1;MEANALT=1.04301;MQM=59.9845;MQMR=60;NS=94;NUMALT=1;ODDS=0.522091;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=148679;QR=55779;RO=1568;RPL=0;RPP=9092.79;RPPR=3407.88;RPR=4186;RUN=1;SAF=0;SAP=9092.79;SAR=4186;SRF=0;SRP=3407.88;SRR=1568;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:25:0,24:0:0:24:855:-76.9488,-7.22472,0	0/1:85:51,34:51:1823:34:1188:-81.6346,0,-138.763	1/1:100:0,100:0:0:100:3553:-319.98,-30.103,0	0/1:96:54,42:54:1912:42:1504:-106.756,0,-143.456	1/1:44:1,43:1:36:43:1531:-134.484,-9.64705,0	1/1:29:0,29:0:0:29:1013:-91.4794,-8.72987,0	1/1:61:0,61:0:0:61:2166:-195.206,-18.3628,0	1/1:90:0,90:0:0:90:3232:-291.101,-27.0927,0	0/1:70:43,27:43:1522:27:964:-66.0047,0,-116.2	1/1:45:0,45:0:0:45:1588:-143.208,-13.5464,0	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	0/1:52:15,37:15:528:37:1307:-102.277,0,-32.1978	0/1:36:23,13:23:816:13:449:-29.9004,0,-62.9246	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	0/1:28:18,10:18:636:10:358:-24.134,0,-49.1392	1/1:20:0,20:0:0:20:712:-64.4067,-6.0206,0	1/1:16:0,16:0:0:16:563:-50.9992,-4.81648,0	0/1:22:16,6:16:576:6:212:-12.8021,0,-45.5523	0/1:18:11,7:11:392:7:248:-17.2457,0,-30.2015	0/1:253:149,104:149:5299:104:3706:-257.581,0,-400.885	1/1:98:0,98:0:0:98:3508:-315.93,-29.5009,0	0/1:100:78,22:78:2759:22:792:-41.5027,0,-218.447	0/1:54:25,29:25:891:29:1032:-76.9379,0,-64.2532	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:87:0,87:0:0:87:3066:-276.166,-26.1896,0	0/1:263:142,120:142:5083:120:4262:-304.529,0,-378.384	1/1:156:0,156:0:0:156:5536:-498.367,-46.9607,0	1/1:15:0,15:0:0:15:528:-47.8514,-4.51545,0	1/1:118:0,118:0:0:118:4183:-376.652,-35.5215,0	0/1:95:47,48:47:1676:48:1711:-125.677,0,-122.529	1/1:85:0,85:0:0:85:3016:-271.669,-25.5876,0	0/1:11:9,2:9:302:2:72:-3.52539,0,-24.1938	1/1:16:0,16:0:0:16:563:-50.9992,-4.81648,0	1/1:6:0,6:0:0:6:212:-19.4229,-1.80618,0	1/1:9:0,9:0:0:9:320:-29.1424,-2.70927,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:130:71,58:71:2517:58:2055:-146.028,0,-187.589	0/1:103:69,34:69:2459:34:1216:-78.7405,0,-190.558	1/1:23:0,23:0:0:23:820:-74.1225,-6.92369,0	1/1:5:0,5:0:0:5:172:-15.818,-1.50515,0	1/1:79:0,79:0:0:79:2800:-252.242,-23.7814,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:120:0,120:0:0:120:4289:-386.187,-36.1236,0	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	1/1:19:0,19:0:0:19:676:-61.168,-5.71957,0	0/1:109:53,56:53:1900:56:1978:-145.479,0,-138.466	0/1:104:65,39:65:2323:39:1371:-92.378,0,-178.022	1/1:149:0,149:0:0:149:5304:-477.496,-44.8535,0	1/1:77:0,77:0:0:77:2734:-246.213,-23.1793,0	0/1:97:72,25:72:2564:25:896:-51.7604,0,-201.808	1/1:102:0,102:0:0:102:3629:-326.815,-30.7051,0	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	1/1:89:0,89:0:0:89:3147:-283.455,-26.7917,0	1/1:37:0,37:0:0:37:1303:-117.568,-11.1381,0	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:101:56,45:56:1965:45:1597:-113.615,0,-146.717	0/1:31:18,13:18:635:13:449:-31.4056,0,-48.145	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	1/1:13:0,13:0:0:13:462:-41.9165,-3.91339,0	1/1:36:0,36:0:0:36:1274:-114.962,-10.8371,0	0/1:58:25,33:25:900:33:1180:-89.0483,0,-63.8613	0/1:7:1,6:1:36:6:216:-17.6833,0,-1.49106	0/1:139:72,67:72:2584:67:2386:-173.153,0,-190.966	1/1:123:0,122:0:0:122:4369:-393.024,-36.7257,0	0/1:32:18,14:18:639:14:496:-35.3413,0,-48.2053	1/1:42:0,42:0:0:42:1499:-135.204,-12.6433,0	0/1:91:43,48:43:1540:48:1720:-127.692,0,-111.499	1/1:95:2,93:2:72:93:3309:-291.191,-21.7611,0	0/1:11:4,7:4:144:7:243:-18.8962,0,-10.0023	1/1:29:0,29:0:0:29:1044:-94.2748,-8.72987,0	1/1:22:0,22:0:0:22:772:-69.7994,-6.62266,0	0/1:17:9,8:9:324:8:288:-21.1499,0,-24.3883	1/1:195:0,195:0:0:195:6915:-622.411,-58.7009,0	1/1:67:0,67:0:0:67:2373:-213.771,-20.169,0	1/1:66:1,65:1:36:65:2306:-204.202,-16.2697,0	0/1:85:47,38:47:1679:38:1356:-96.7529,0,-125.809	1/1:83:2,81:2:72:81:2880:-252.599,-18.1488,0	0/1:66:41,25:41:1438:25:892:-60.7317,0,-109.846	0/1:16:7,9:7:248:9:324:-24.6894,0,-17.8477	0/1:66:49,17:49:1728:17:607:-35.0936,0,-135.934	1/1:71:0,71:0:0:71:2527:-227.682,-21.3731,0	1/1:150:0,150:0:0:150:5317:-478.666,-45.1545,0	0/1:63:30,33:30:1054:33:1163:-86.0112,0,-76.2043	1/1:21:0,21:0:0:21:730:-66.0194,-6.32163,0	1/1:18:0,18:0:0:18:627:-56.7544,-5.41854,0	0/1:66:44,22:44:1568:22:766:-49.3905,0,-121.544	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	0/1:40:23,17:23:819:17:583:-40.7512,0,-61.9904	1/1:29:0,29:0:0:29:1028:-92.833,-8.72987,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:56:31,25:31:1100:25:881:-62.7495,0,-82.4526	0/1:33:19,14:19:680:14:504:-35.7641,0,-51.5952	1/1:85:0,85:0:0:85:2992:-269.511,-25.5876,0	1/1:47:0,47:0:0:47:1680:-151.487,-14.1484,0
chr11	17350074	.	G	A	99839	PASS	AB=0.513369;ABP=15.2031;AC=41;AF=0.218085;AN=188;AO=4325;CIGAR=1X;DP=17208;DPB=17208;DPRA=1.23496;EPP=9368.59;EPPR=27958.5;GTI=2;LEN=1;MEANALT=1.08163;MQM=59.9824;MQMR=59.9894;NS=94;NUMALT=1;ODDS=0.960031;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=153781;QR=457706;RO=12874;RPL=2188;RPP=4.3162;RPPR=171.681;RPR=2137;RUN=1;SAF=2189;SAP=4.42063;SAR=2136;SRF=6937;SRP=171.681;SRR=5937;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:104:104,0:104:3695:0:0:0,-31.3071,-332.667	0/1:290:149,141:149:5292:141:4985:-361.502,0,-389.122	0/0:157:157,0:157:5591:0:0:0,-47.2617,-503.316	0/1:346:155,191:155:5491:191:6812:-508.996,0,-390.164	0/0:133:133,0:133:4738:0:0:0,-40.037,-426.58	0/0:56:56,0:56:1978:0:0:0,-16.8577,-178.293	0/0:183:183,0:183:6517:0:0:0,-55.0885,-586.616	0/0:313:312,0:312:11108:0:0:0,-93.9214,-999.407	0/1:248:114,134:114:4068:134:4808:-358.219,0,-291.653	0/0:153:153,0:153:5441:0:0:0,-46.0576,-489.821	0/0:149:149,0:149:5275:0:0:0,-44.8535,-474.89	0/1:203:93,110:93:3327:110:3906:-290.611,0,-238.538	0/1:176:81,95:81:2884:95:3412:-254.312,0,-206.816	0/0:136:136,0:136:4836:0:0:0,-40.9401,-435.266	0/1:199:109,90:109:3880:90:3228:-230.837,0,-289.492	0/0:143:143,0:143:5099:0:0:0,-43.0473,-459.055	0/0:108:108,0:108:3840:0:0:0,-32.5112,-345.796	0/1:112:52,60:52:1856:60:2152:-160.232,0,-133.604	0/1:94:50,44:50:1792:44:1563:-112.664,0,-133.266	0/1:401:225,176:225:7997:176:6256:-442.292,0,-599.042	0/0:259:259,0:259:9172:0:0:0,-77.9668,-825.461	0/1:199:66,133:66:2338:133:4726:-365.594,0,-150.774	0/1:171:72,99:72:2571:99:3527:-266.164,0,-180.163	0/0:126:126,0:126:4485:0:0:0,-37.9298,-403.795	0/0:166:166,0:166:5928:0:0:0,-49.971,-533.629	0/1:450:218,232:218:7771:232:8211:-603.544,0,-563.959	0/0:366:366,0:366:13068:0:0:0,-110.177,-1175.93	0/0:84:84,0:84:2961:0:0:0,-25.2865,-266.724	0/0:349:348,0:348:12388:0:0:0,-104.758,-1114.5	0/1:230:124,106:124:4367:106:3745:-268.014,0,-323.968	0/0:241:241,0:241:8539:0:0:0,-72.5482,-768.513	0/1:11:3,8:3:108:8:284:-22.592,0,-6.76384	0/0:57:57,0:57:2027:0:0:0,-17.1587,-182.702	0/0:28:28,0:28:985:0:0:0,-8.42884,-88.9615	0/0:15:15,0:15:525:0:0:0,-4.51545,-47.5781	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/1:526:266,260:266:9483:260:9258:-674.794,0,-695.093	0/1:258:113,145:113:3999:145:5154:-386.338,0,-282.435	0/0:149:148,0:148:5262:0:0:0,-44.5524,-473.357	0/0:13:13,0:13:460:0:0:0,-3.91339,-41.7354	0/0:277:275,1:275:9758:1:32:0,-80.1999,-874.979	0/0:101:101,0:101:3587:0:0:0,-30.404,-323.039	0/0:320:320,0:320:11354:0:0:0,-96.3296,-1021.75	0/0:214:214,0:214:7648:0:0:0,-64.4204,-688.355	0/0:168:167,1:167:5938:1:36:0,-46.9748,-530.93	0/1:211:103,108:103:3684:108:3839:-282.191,0,-267.542	0/1:191:127,64:127:4497:64:2263:-146.435,0,-347.405	0/0:262:260,2:260:9258:2:72:0,-72.0331,-826.353	0/0:160:159,0:159:5641:0:0:0,-47.8638,-507.453	0/1:190:100,90:100:3553:90:3190:-230.124,0,-262.781	0/0:238:237,1:237:8430:1:36:0,-68.0469,-755.108	1/1:305:23,282:23:805:282:9995:-826.728,-19.0466,0	0/0:205:203,1:203:7184:1:36:0,-58.1186,-643.076	0/0:114:114,0:114:4076:0:0:0,-34.3174,-367.027	0/1:30:15,15:15:536:15:532:-39.1822,0,-39.5439	0/1:238:102,136:102:3604:136:4837:-363.841,0,-252.923	0/1:79:32,47:32:1140:47:1684:-128.066,0,-79.1278	0/1:21:16,5:16:576:5:180:-10.2304,0,-45.8534	0/0:28:27,1:27:968:1:36:0,-4.83056,-83.8391	0/0:148:148,0:148:5270:0:0:0,-44.5524,-474.438	0/1:213:115,98:115:4103:98:3491:-250.282,0,-305.337	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/1:298:123,175:123:4387:175:6224:-470.552,0,-305.297	0/0:379:379,0:379:13471:0:0:0,-114.09,-1212.19	0/1:137:67,70:67:2371:70:2508:-184.731,0,-172.407	0/0:136:136,0:136:4808:0:0:0,-40.9401,-432.877	0/1:382:177,204:177:6301:204:7267:-539.049,0,-452.153	0/0:156:156,0:156:5584:0:0:0,-46.9607,-502.683	0/1:69:24,45:24:848:45:1584:-122.077,0,-55.8686	0/0:63:63,0:63:2244:0:0:0,-18.9649,-202.224	0/0:125:125,0:125:4434:0:0:0,-37.6287,-399.227	0/1:45:13,32:13:451:32:1148:-90.0835,0,-27.3735	0/0:214:213,1:213:7570:1:36:0,-60.8221,-677.745	0/0:119:117,2:117:4175:2:72:0,-28.9858,-369.096	0/0:235:235,0:235:8336:0:0:0,-70.742,-750.253	0/1:221:118,103:118:4206:103:3663:-263.347,0,-312.194	0/0:220:220,0:220:7749:0:0:0,-66.2266,-697.447	0/1:196:117,79:117:4135:79:2828:-195.757,0,-313.334	0/1:29:17,12:17:612:12:423:-29.6752,0,-46.6836	0/1:218:102,116:102:3644:116:4080:-301.764,0,-262.541	0/0:199:197,1:197:7023:1:36:0,-56.3356,-628.567	0/0:359:358,0:358:12758:0:0:0,-107.769,-1147.83	0/1:169:85,84:85:3030:84:2966:-216.298,0,-222.056	0/0:153:153,0:153:5430:0:0:0,-46.0576,-488.834	0/0:187:187,0:187:6651:0:0:0,-56.2926,-598.673	0/1:349:180,169:180:6376:169:6013:-436.131,0,-468.874	0/0:99:99,0:99:3505:0:0:0,-29.802,-315.662	0/1:219:107,112:107:3798:112:3972:-291.746,0,-276.094	0/0:153:153,0:153:5417:0:0:0,-46.0576,-487.665	0/0:86:86,0:86:3036:0:0:0,-25.8886,-273.471	0/1:166:86,80:86:3042:80:2860:-207.667,0,-224.04	0/1:261:100,161:100:3579:161:5707:-435.18,0,-243.748	0/0:144:144,0:144:5134:0:0:0,-43.3483,-462.203	0/0:262:262,0:262:9341:0:0:0,-78.8699,-840.656
chr11	17350085	.	A	G	163551	PASS	AB=0.494756;ABP=4.08077;AC=146;AF=0.776596;AN=188;AO=6819;CIGAR=1X;DP=9381;DPB=9381;DPRA=0;EPP=14801.6;EPPR=5544.61;GTI=3;LEN=1;MEANALT=1.06383;MQM=59.9903;MQMR=59.9757;NS=94;NUMALT=1;ODDS=2.63113;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=240908;QR=90766;RO=2556;RPL=902;RPP=8011.96;RPPR=2676.64;RPR=5917;RUN=1;SAF=901;SAP=8018.35;SAR=5918;SRF=390;SRP=2682.67;SRR=2166;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:11:0,11:0:0:11:392:-35.6201,-3.31133,0	0/1:207:91,116:91:3237:116:4073:-304.441,0,-229.238	1/1:70:0,70:0:0:70:2485:-223.902,-21.0721,0	0/1:165:103,62:103:3642:62:2197:-148.324,0,-278.315	1/1:37:0,37:0:0:37:1283:-115.767,-11.1381,0	1/1:15:0,15:0:0:15:532:-48.2131,-4.51545,0	1/1:74:0,74:0:0:74:2622:-236.228,-22.2762,0	1/1:135:0,135:0:0:135:4736:-426.402,-40.6391,0	0/1:46:15,31:15:540:31:1090:-84.5605,0,-35.0892	1/1:67:0,67:0:0:67:2356:-212.295,-20.169,0	1/1:74:0,74:0:0:74:2648:-238.567,-22.2762,0	0/1:79:43,36:43:1523:36:1279:-91.6311,0,-113.545	0/1:77:45,32:45:1594:32:1113:-77.2955,0,-120.569	1/1:72:0,72:0:0:72:2484:-223.813,-21.6742,0	0/1:115:53,62:53:1863:62:2195:-163.197,0,-133.327	1/1:81:0,81:0:0:81:2873:-258.807,-24.3834,0	1/1:80:0,80:0:0:80:2824:-254.399,-24.0824,0	0/1:74:38,36:38:1359:36:1270:-92.3251,0,-100.334	0/1:58:30,28:30:1063:28:972:-70.3294,0,-78.5211	0/1:110:49,60:49:1756:60:2135:-159.246,0,-125.152	1/1:100:0,100:0:0:100:3523:-317.28,-30.103,0	0/1:188:120,68:120:4239:68:2424:-161.823,0,-325.101	0/1:23:12,11:12:424:11:391:-28.6058,0,-31.5727	1/1:52:0,52:0:0:52:1833:-165.247,-15.6536,0	1/1:60:0,60:0:0:60:2135:-192.418,-18.0618,0	0/1:424:212,212:212:7532:212:7548:-551.727,0,-550.237	1/1:136:0,136:0:0:136:4842:-435.933,-40.9401,0	1/1:48:0,48:0:0:48:1690:-152.384,-14.4494,0	1/1:336:0,336:0:0:336:11898:-1070.69,-101.146,0	0/1:133:60,73:60:2139:73:2572:-191.69,0,-152.74	1/1:158:0,158:0:0:158:5501:-495.221,-47.5627,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	1/1:24:0,24:0:0:24:864:-78.0826,-7.22472,0	1/1:21:0,21:0:0:21:748:-67.6453,-6.32163,0	0/1:10:1,9:1:36:9:316:-25.7686,0,-0.587975	1/1:19:0,19:0:0:19:667:-60.3546,-5.71957,0	0/1:500:236,264:236:8368:264:9373:-693.028,0,-602.564	0/1:105:60,45:60:2156:45:1593:-112.05,0,-162.699	1/1:92:0,92:0:0:92:3236:-291.464,-27.6948,0	1/1:5:0,5:0:0:5:165:-15.1736,-1.50515,0	1/1:135:1,134:1:36:134:4748:-423.881,-37.0408,0	1/1:51:0,51:0:0:51:1786:-161.021,-15.3525,0	1/1:139:0,138:0:0:138:4871:-438.186,-41.5421,0	1/1:107:0,106:0:0:106:3763:-338.512,-31.9092,0	1/1:89:0,89:0:0:89:3112:-280.308,-26.7917,0	0/1:189:91,98:91:3211:98:3491:-257.075,0,-232.321	0/1:110:35,75:35:1239:75:2651:-205.722,0,-78.7004	1/1:131:2,128:2:72:128:4548:-402.651,-32.657,0	1/1:73:0,73:0:0:73:2561:-230.738,-21.9752,0	0/1:114:53,61:53:1891:61:2135:-158.098,0,-136.15	1/1:240:1,239:1:21:239:8501:-762.993,-70.1473,0	0/0:299:285,13:285:10172:13:453:0,-48.9663,-874.311	1/1:102:1,101:1:36:101:3586:-319.347,-27.1068,0	1/1:116:0,116:0:0:116:4127:-371.616,-34.9195,0	0/1:19:8,11:8:284:11:387:-29.4464,0,-20.1838	0/1:115:58,57:58:2073:57:2017:-147.183,0,-152.22	0/1:22:13,9:13:464:9:324:-22.8832,0,-35.4748	0/1:21:5,16:5:176:16:564:-44.7687,0,-9.86339	1/1:32:1,31:1:36:31:1084:-94.2632,-6.03469,0	1/1:48:0,48:0:0:48:1712:-154.366,-14.4494,0	0/1:104:51,53:51:1816:53:1855:-135.922,0,-132.414	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/1:291:169,122:169:5987:122:4353:-304.345,0,-451.341	1/1:214:0,214:0:0:214:7572:-681.524,-64.4204,0	0/1:75:47,28:47:1655:28:976:-65.5724,0,-126.612	1/1:55:0,55:0:0:55:1947:-175.505,-16.5567,0	0/1:141:62,79:62:2195:79:2767:-206.824,0,-155.368	1/1:46:0,46:0:0:46:1598:-144.105,-13.8474,0	0/1:37:19,18:19:662:18:640:-46.7912,0,-48.7643	1/1:26:0,26:0:0:26:916:-82.7546,-7.82678,0	1/1:122:0,122:0:0:122:4315:-388.529,-36.7257,0	0/1:23:15,8:15:527:8:288:-19.3437,0,-40.8365	1/1:68:0,68:0:0:68:2391:-215.446,-20.47,0	1/1:40:2,38:2:68:38:1334:-113.898,-5.58349,0	1/1:94:0,94:0:0:94:3352:-301.898,-28.2968,0	0/1:113:50,62:50:1784:62:2185:-162.84,0,-126.768	1/1:91:0,91:0:0:91:3189:-287.233,-27.3937,0	0/1:84:46,38:46:1648:38:1334:-95.0693,0,-123.322	0/1:11:4,7:4:144:7:252:-19.7176,0,-10.0023	0/1:125:75,50:75:2656:50:1777:-122.582,0,-201.656	1/1:93:0,93:0:0:93:3305:-297.669,-27.9958,0	1/1:156:0,156:0:0:156:5494:-494.589,-46.9607,0	0/1:92:45,47:45:1584:47:1645:-120.639,0,-115.153	1/1:78:0,78:0:0:78:2733:-246.214,-23.4803,0	1/1:122:0,122:0:0:122:4340:-390.778,-36.7257,0	0/1:169:77,92:77:2742:92:3205:-237.8,0,-196.148	1/1:60:0,60:0:0:60:2113:-190.438,-18.0618,0	0/1:118:67,51:67:2387:51:1803:-127.03,0,-179.566	1/1:77:0,77:0:0:77:2715:-244.595,-23.1793,0	1/1:50:1,49:1:36:49:1731:-152.476,-11.4532,0	0/1:82:32,50:32:1144:50:1776:-135.439,0,-78.5851	0/1:101:65,36:65:2297:36:1262:-83.4769,0,-176.586	1/1:58:0,58:0:0:58:2063:-185.941,-17.4597,0	1/1:121:0,121:0:0:121:4239:-381.696,-36.4246,0
chr11	19237145	.	C	T	47822.4	PASS	AB=0.516272;ABP=15.4481;AC=40;AF=0.212766;AN=188;AO=2798;CIGAR=1X;DP=12318;DPB=12318;DPRA=1.02638;EPP=6061.43;EPPR=20279.8;GTI=0;LEN=1;MEANALT=1.08889;MQM=59.8417;MQMR=59.9706;NS=94;NUMALT=1;ODDS=1.02174;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=99961;QR=337979;RO=9513;RPL=2;RPP=6061.43;RPPR=20279.8;RPR=2796;RUN=1;SAF=2798;SAP=6078.79;SAR=0;SRF=9513;SRP=20660.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:74:74,0:74:2551:0:0:0,-22.2762,-229.84	0/1:240:128,112:128:4552:112:3991:-287.132,0,-337.6	0/0:138:138,0:138:4938:0:0:0,-41.5421,-444.569	0/1:390:193,197:193:6832:197:7016:-512.805,0,-497.554	0/0:169:168,1:168:5969:1:36:0,-47.2758,-533.722	0/0:92:92,0:92:3282:0:0:0,-27.6948,-295.596	0/0:218:218,0:218:7767:0:0:0,-65.6245,-698.635	0/0:259:259,0:259:9195:0:0:0,-77.9668,-827.527	0/1:166:83,82:83:2911:82:2915:-212.551,0,-212.196	0/0:107:106,0:106:3776:0:0:0,-31.9092,-339.82	0/0:72:72,0:72:2571:0:0:0,-21.6742,-231.639	0/1:85:49,36:49:1729:36:1270:-89.0044,0,-130.305	0/1:60:30,30:30:1072:30:1060:-77.3775,0,-78.7307	0/0:58:58,0:58:2075:0:0:0,-17.4597,-187.004	0/1:62:32,30:32:1135:30:1076:-78.489,0,-83.7942	0/0:59:59,0:59:2112:0:0:0,-17.7608,-190.349	0/0:60:60,0:60:2137:0:0:0,-18.0618,-192.596	0/1:51:22,29:22:792:29:1031:-77.7363,0,-56.2531	0/1:55:23,32:23:824:32:1148:-87.0723,0,-57.9267	0/1:418:194,224:194:6880:224:8005:-594.505,0,-493.439	0/0:274:274,0:274:9631:0:0:0,-82.4822,-866.689	0/1:157:58,99:58:2035:99:3521:-269.838,0,-136.161	0/1:89:41,48:41:1456:48:1715:-127.842,0,-104.544	0/0:227:227,0:227:8091:0:0:0,-68.3338,-728.212	0/0:87:87,0:87:3101:0:0:0,-26.1896,-279.316	0/1:476:236,240:236:8383:240:8581:-628.995,0,-611.178	0/0:336:336,0:336:11959:0:0:0,-101.146,-1076.17	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/0:459:459,0:459:16337:0:0:0,-138.173,-1470.01	0/1:140:69,71:69:2445:71:2540:-186.389,0,-178.16	0/0:128:128,0:128:4554:0:0:0,-38.5318,-410.028	0/1:21:5,15:5:176:15:540:-42.5561,0,-9.80592	0/0:28:28,0:28:993:0:0:0,-8.42884,-89.6825	0/0:12:12,0:12:419:0:0:0,-3.61236,-38.0427	0/0:20:20,0:20:708:0:0:0,-6.0206,-64.0456	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:226:103,123:103:3671:123:4406:-328.242,0,-262.561	0/1:252:117,135:117:4151:135:4827:-358.723,0,-297.647	0/0:84:84,0:84:2970:0:0:0,-25.2865,-267.534	0/0:13:12,1:12:428:1:36:0,-0.315115,-35.2605	0/0:168:168,0:168:5935:0:0:0,-50.573,-534.262	0/0:41:41,0:41:1463:0:0:0,-12.3422,-131.965	0/0:264:264,0:264:9377:0:0:0,-79.4719,-843.894	0/0:108:108,0:108:3864:0:0:0,-32.5112,-347.956	0/0:89:89,0:89:3170:0:0:0,-26.7917,-285.524	0/1:148:51,97:51:1807:97:3456:-266.471,0,-118.359	0/1:61:37,24:37:1324:24:860:-59.359,0,-101.099	0/0:143:141,2:141:4996:2:72:0,-36.2106,-442.952	0/0:115:115,0:115:4110:0:0:0,-34.6184,-370.083	0/1:227:124,103:124:4405:103:3704:-265.223,0,-328.282	0/0:237:237,0:237:8426:0:0:0,-71.3441,-758.348	0/1:22:11,11:11:392:11:392:-28.9974,0,-28.9974	0/0:168:168,0:168:5961:0:0:0,-50.573,-536.602	0/0:29:29,0:29:1009:0:0:0,-8.72987,-91.1189	0/1:22:10,12:10:356:12:432:-32.5808,0,-25.7586	0/1:112:52,60:52:1856:60:2128:-158.071,0,-133.604	0/1:83:32,51:32:1136:51:1822:-139.275,0,-77.563	0/1:26:14,12:14:487:12:419:-30.2159,0,-36.3324	0/0:19:19,0:19:680:0:0:0,-5.71957,-61.521	0/0:79:79,0:79:2796:0:0:0,-23.7814,-251.88	0/1:126:57,69:57:2027:69:2484:-185.883,0,-144.772	0/1:18:6,12:6:216:12:432:-33.8027,0,-14.372	0/1:181:87,93:87:3108:93:3322:-244.758,0,-225.521	0/0:374:373,0:373:13281:0:0:0,-112.284,-1194.89	0/1:94:44,50:44:1572:50:1775:-131.722,0,-113.475	0/0:96:96,0:96:3416:0:0:0,-28.8989,-307.656	0/1:230:129,101:129:4555:101:3612:-256.03,0,-340.513	0/0:151:150,1:150:5323:1:36:0,-41.8573,-475.606	0/1:26:19,7:19:684:7:252:-15.2022,0,-54.0635	0/0:131:131,0:131:4630:0:0:0,-39.4349,-416.866	0/0:89:89,0:89:3176:0:0:0,-26.7917,-286.065	0/1:26:16,10:16:572:10:356:-24.5545,0,-43.9866	0/0:100:100,0:100:3537:0:0:0,-30.103,-318.523	0/0:77:77,0:77:2735:0:0:0,-23.1793,-246.393	0/0:254:254,0:254:8999:0:0:0,-76.4616,-809.892	0/1:224:119,105:119:4231:105:3762:-271.318,0,-313.542	0/0:93:92,1:92:3276:1:36:0,-24.3975,-291.46	0/1:156:89,67:89:3148:67:2396:-168.922,0,-236.585	0/1:20:8,12:8:288:12:428:-32.8382,0,-20.2468	0/1:178:77,99:77:2764:99:3532:-264.749,0,-195.66	0/0:118:118,0:118:4174:0:0:0,-35.5215,-375.843	0/0:362:362,0:362:12866:0:0:0,-108.973,-1157.77	0/1:92:45,47:45:1603:47:1684:-124.152,0,-116.865	0/0:51:51,0:51:1823:0:0:0,-15.3525,-164.345	0/0:104:104,0:104:3716:0:0:0,-31.3071,-334.642	0/1:171:77,94:77:2742:94:3372:-252.219,0,-195.546	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.545	0/1:103:47,56:47:1663:56:1999:-149.17,0,-118.932	0/0:73:73,0:73:2602:0:0:0,-21.9752,-234.428	0/0:39:39,0:39:1378:0:0:0,-11.7402,-124.317	0/1:84:44,40:44:1567:40:1436:-104.251,0,-115.988	0/1:90:33,57:33:1184:57:2048:-157.498,0,-79.7756	0/0:131:131,0:131:4634:0:0:0,-39.4349,-417.228	0/0:116:116,0:116:4135:0:0:0,-34.9195,-372.335
chr11	19354679	.	C	A	699920	PASS	AB=0.527282;ABP=54.0769;AC=154;AF=0.819149;AN=188;AO=26279;CIGAR=1X;DP=30106;DPB=30106;DPRA=0;EPP=15759.9;EPPR=164.967;GTI=1;LEN=1;MEANALT=1.18085;MQM=52.8671;MQMR=59.691;NS=94;NUMALT=1;ODDS=16.2676;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=938123;QR=135642;RO=3809;RPL=17;RPP=56919.6;RPPR=8178.88;RPR=26262;RUN=1;SAF=20061;SAP=15837.6;SAR=6218;SRF=2182;SRP=178.612;SRR=1627;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:165:0,165:0:0:165:5904:-530.222,-49.67,0	0/1:320:153,167:153:5471:167:5968:-437.739,0,-395.317	1/1:293:0,293:0:0:293:10472:-936.851,-88.2018,0	0/1:464:222,242:222:7906:242:8623:-634.797,0,-571.248	1/1:147:0,147:0:0:147:5267:-473.185,-44.2514,0	1/1:47:0,47:0:0:47:1680:-151.224,-14.1484,0	1/1:290:0,290:0:0:290:10343:-928.764,-87.2987,0	1/1:287:0,287:0:0:287:10191:-910.147,-86.3956,0	0/1:224:113,111:113:4026:111:3963:-288.092,0,-295.072	1/1:163:0,163:0:0:163:5805:-521.371,-49.0679,0	1/1:511:0,511:0:0:511:18242:-1634.37,-153.826,0	0/1:148:79,69:79:2828:69:2472:-176.951,0,-209.949	0/1:151:79,72:79:2824:72:2576:-186.029,0,-208.885	1/1:115:0,115:0:0:115:4124:-370.178,-34.6185,0	0/1:124:56,68:56:2000:68:2431:-181.194,0,-142.941	1/1:128:0,128:0:0:128:4596:-412.44,-38.5318,0	1/1:136:0,136:0:0:136:4851:-434.093,-40.9401,0	0/1:117:62,55:62:2224:55:1964:-139.482,0,-165.168	0/1:153:40,113:40:1436:113:4048:-315.51,0,-83.4625	0/1:410:197,213:197:6979:213:7571:-556.592,0,-504.693	1/1:259:0,259:0:0:259:9226:-827.601,-77.9668,0	0/1:121:77,44:77:2740:44:1576:-105.625,0,-210.419	0/1:145:69,76:69:2456:76:2702:-199.495,0,-177.646	1/1:226:0,226:0:0:226:8069:-724.731,-68.0328,0	1/1:231:1,230:1:36:230:8199:-732.375,-65.9397,0	0/1:493:240,253:240:8515:253:9042:-663.764,0,-617.904	1/1:497:0,497:0:0:497:17764:-1593.13,-149.612,0	1/1:59:0,59:0:0:59:2120:-190.615,-17.7608,0	1/1:567:1,565:1:36:565:20172:-1808.17,-167.125,0	0/1:193:106,87:106:3750:87:3112:-220.954,0,-279.405	1/1:208:0,208:0:0:208:7433:-667.807,-62.6142,0	1/1:640:5,633:5:180:633:22590:-2004.45,-175.864,0	1/1:823:0,823:0:0:823:29372:-2628.76,-247.748,0	1/1:1576:0,1575:0:0:1575:56230:-5006.83,-474.122,0	1/1:2385:2,2381:2:72:2381:84984:-7563.55,-710.877,0	1/1:962:1,961:1:36:961:34271:-3052.27,-285.993,0	0/1:358:190,168:190:6780:168:5977:-429.191,0,-502.487	0/1:166:71,95:71:2540:95:3396:-254.566,0,-178.839	1/1:460:0,459:0:0:459:16441:-1464.75,-138.173,0	1/1:957:0,955:0:0:955:34071:-3044.77,-287.484,0	0/1:295:138,156:138:4952:156:5587:-412.234,0,-356.94	1/1:255:1,254:1:36:254:9087:-809.897,-73.1644,0	1/1:333:0,332:0:0:332:11832:-1060.8,-99.942,0	1/1:117:0,116:0:0:116:4151:-372.364,-34.9195,0	1/1:107:0,107:0:0:107:3782:-339.597,-32.2102,0	0/1:166:85,81:85:3048:81:2882:-209.517,0,-224.533	0/1:178:84,94:84:2971:94:3357:-246.461,0,-213.799	1/1:344:0,344:0:0:344:12307:-1104.91,-103.554,0	1/1:158:0,158:0:0:158:5631:-505.5,-47.5627,0	0/1:303:154,149:154:5451:149:5336:-388.253,0,-399.486	1/1:296:0,296:0:0:296:10539:-946.194,-89.1049,0	1/1:714:4,710:4:144:710:25359:-2261.74,-201.622,0	1/1:289:0,289:0:0:289:10332:-923.172,-86.9977,0	1/1:79:0,79:0:0:79:2824:-254.209,-23.7814,0	1/1:281:8,273:8:288:273:9718:-839.668,-58.3398,0	1/1:310:0,310:0:0:310:11031:-989.269,-93.3193,0	0/1:94:34,60:34:1220:60:2143:-164.563,0,-81.8084	1/1:851:1,850:1:36:850:30315:-2716.14,-252.578,0	1/1:872:0,872:0:0:872:31127:-2790.13,-262.498,0	1/1:121:0,121:0:0:121:4336:-389.426,-36.4246,0	0/1:162:84,77:84:3007:77:2747:-197.342,0,-222.007	1/1:362:15,347:15:540:347:12371:-1060.15,-60.0363,0	0/1:230:135,95:135:4789:95:3395:-236.104,0,-361.174	1/1:316:2,313:2:72:313:11198:-997.554,-88.3472,0	0/1:119:71,48:71:2527:48:1720:-117.688,0,-190.661	1/1:193:0,193:0:0:193:6908:-620.428,-58.0988,0	0/1:363:172,191:172:6112:191:6780:-499.707,0,-440.766	1/1:128:4,124:4:144:124:4436:-385.276,-25.2182,0	0/1:254:31,223:31:1108:223:7975:-636.535,0,-23.5612	1/1:94:0,94:0:0:94:3364:-301.666,-28.2968,0	1/1:134:0,134:0:0:134:4799:-430.541,-40.338,0	1/1:429:18,411:18:622:411:14639:-1255.49,-72.8417,0	1/1:203:0,203:0:0:203:7252:-651.094,-61.1091,0	1/1:150:0,150:0:0:150:5359:-481.114,-45.1545,0	1/1:280:0,280:0:0:280:9985:-897,-84.2884,0	0/1:359:196,163:196:6931:163:5834:-416.077,0,-514.754	1/1:163:0,163:0:0:163:5812:-521.375,-49.0679,0	0/1:249:136,112:136:4834:112:3985:-281.236,0,-360.107	1/1:742:15,726:15:532:726:25973:-2270.44,-175.208,0	0/1:299:150,149:150:5328:149:5308:-386.033,0,-389.623	1/1:264:0,264:0:0:264:9434:-843.048,-79.4719,0	1/1:406:0,405:0:0:405:14486:-1298.4,-121.917,0	0/1:136:64,72:64:2292:72:2560:-187.613,0,-165.597	1/1:129:0,129:0:0:129:4607:-414.092,-38.8329,0	1/1:176:0,176:0:0:176:6288:-563.957,-52.9813,0	0/1:243:139,104:139:4959:104:3701:-259.654,0,-373.29	1/1:53:0,52:0:0:52:1862:-166.167,-15.6536,0	0/1:126:67,59:67:2396:59:2116:-152.149,0,-177.931	0/1:128:59,69:59:2108:69:2456:-182.041,0,-151.246	1/1:520:0,520:0:0:520:18550:-1659.38,-156.536,0	0/1:455:68,387:68:2428:387:13835:-1102.41,0,-81.8073	0/1:153:110,43:110:3932:43:1532:-91.542,0,-307.992	1/1:21:0,21:0:0:21:748:-67.6314,-6.32163,0	1/1:185:0,1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chr11	19358793	.	C	T	72198.4	PASS	AB=0.479522;ABP=27.3788;AC=34;AF=0.180851;AN=188;AO=3278;CIGAR=1X;DP=21562;DPB=21562;DPRA=1.43965;EPP=7121.1;EPPR=39667.1;GTI=0;LEN=1;MEANALT=1.08333;MQM=59.9924;MQMR=59.9931;NS=94;NUMALT=1;ODDS=61.3574;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=116765;QR=646813;RO=18278;RPL=1690;RPP=9.90231;RPPR=7105.48;RPR=1588;RUN=1;SAF=1690;SAP=9.90231;SAR=1588;SRF=13006;SRP=7109.15;SRR=5272;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:89:89,0:89:3143:0:0:0,-26.7917,-283.093	0/1:265:107,158:107:3822:158:5637:-427.676,0,-264.403	0/0:163:161,2:161:5703:2:72:0,-42.2312,-506.553	0/1:283:142,141:142:5041:141:5039:-368.463,0,-368.647	0/0:79:79,0:79:2808:0:0:0,-23.7814,-252.958	0/0:82:82,0:82:2911:0:0:0,-24.6845,-262.226	0/0:232:231,1:231:8127:1:36:0,-66.2407,-727.857	0/0:235:235,0:235:8299:0:0:0,-70.742,-746.927	0/1:159:67,92:67:2378:92:3296:-248.995,0,-166.413	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/0:506:505,1:505:17710:1:36:0,-148.723,-1589.93	0/1:167:80,87:80:2789:87:3071:-226.346,0,-200.981	0/1:141:61,80:61:2143:80:2843:-213.665,0,-150.69	0/0:153:153,0:153:5355:0:0:0,-46.0576,-482.087	0/1:143:60,83:60:2092:83:2961:-223.675,0,-145.501	0/0:131:131,0:131:4614:0:0:0,-39.4349,-415.428	0/0:157:156,1:156:5455:1:36:0,-43.6634,-487.415	0/1:192:94,98:94:3321:98:3487:-256.242,0,-241.312	0/1:226:177,49:177:6241:49:1743:-89.1209,0,-493.755	0/1:219:109,110:109:3865:110:3936:-288.507,0,-282.119	0/0:244:244,0:244:8666:0:0:0,-73.4513,-779.939	0/1:73:16,57:16:568:57:2039:-161.806,0,-29.4767	0/1:110:59,51:59:2096:51:1824:-131.328,0,-155.797	0/0:171:171,0:171:6078:0:0:0,-51.4761,-547.124	0/0:104:103,1:103:3611:1:36:0,-27.7088,-321.601	0/1:353:144,209:144:5075:209:7491:-567.967,0,-350.634	0/0:247:246,1:246:8666:1:36:0,-70.7561,-776.321	0/0:66:66,0:66:2334:0:0:0,-19.868,-210.319	0/0:273:273,0:273:9648:0:0:0,-82.1812,-868.283	0/1:152:70,82:70:2491:82:2917:-217.009,0,-178.686	0/0:171:171,0:171:6048:0:0:0,-51.4761,-544.428	0/0:247:245,2:245:8665:2:72:0,-67.5177,-773.017	0/0:756:754,1:754:26908:1:36:0,-224.039,-2417.35	0/0:378:377,1:377:13430:1:36:0,-110.191,-1204.9	0/0:786:784,2:784:27819:2:72:0,-229.773,-2496.08	0/0:978:977,1:977:34702:1:36:0,-290.809,-3118.5	0/1:344:136,208:136:4769:208:7435:-565.642,0,-325.814	0/1:131:69,62:69:2423:62:2205:-159.279,0,-178.89	0/0:515:515,0:515:18114:0:0:0,-155.03,-1629.88	0/0:448:448,0:448:15985:0:0:0,-134.861,-1438.34	0/1:228:124,104:124:4400:104:3689:-263.578,0,-327.54	0/0:267:267,0:267:9428:0:0:0,-80.375,-848.487	0/0:126:126,0:126:4478:0:0:0,-37.9298,-403.189	0/0:178:178,0:178:6248:0:0:0,-53.5833,-562.426	0/0:140:140,0:140:4890:0:0:0,-42.1442,-440.26	0/1:117:54,63:54:1888:63:2255:-167.993,0,-134.975	0/1:149:74,75:74:2648:75:2671:-195.782,0,-193.713	0/0:189:185,3:185:6570:3:108:0,-46.8783,-581.309	0/0:136:136,0:136:4865:0:0:0,-40.9401,-438.002	0/1:223:111,112:111:3928:112:3994:-292.52,0,-286.585	0/0:211:211,0:211:7491:0:0:0,-63.5173,-674.238	0/0:349:346,3:346:12281:3:108:0,-94.9843,-1095.06	0/0:134:133,1:133:4743:1:36:0,-36.7397,-423.431	0/0:62:62,0:62:2213:0:0:0,-18.6639,-199.433	0/0:216:206,10:206:7299:10:351:0,-33.0958,-625.036	0/0:166:166,0:166:5927:0:0:0,-49.971,-533.538	0/1:66:39,27:39:1369:27:953:-66.2167,0,-103.638	0/0:505:505,0:505:17911:0:0:0,-152.02,-1611.61	0/0:550:549,1:549:19514:1:36:0,-161.968,-1752.21	0/0:146:146,0:146:5181:0:0:0,-43.9504,-466.408	0/1:194:69,125:69:2407:125:4467:-343.8,0,-158.467	0/0:153:151,2:151:5392:2:72:0,-39.2209,-478.576	0/1:143:66,77:66:2338:77:2743:-204.065,0,-167.632	0/0:254:246,8:246:8787:8:280:0,-50.9223,-765.278	0/1:115:58,56:58:2054:56:1986:-144.337,0,-150.453	0/0:94:93,1:93:3253:1:32:0,-25.0975,-289.79	0/1:196:98,98:98:3459:98:3516:-257.647,0,-252.521	0/0:146:144,2:144:5134:2:57:0,-38.5371,-456.79	0/1:323:276,47:276:9841:47:1637:-50.3831,0,-788.405	0/0:120:120,0:120:4167:0:0:0,-36.1236,-375.215	0/0:195:195,0:195:6898:0:0:0,-58.7008,-620.895	0/0:337:324,13:324:11517:13:464:0,-59.3496,-994.314	0/0:82:82,0:82:2892:0:0:0,-24.6845,-260.516	0/0:68:68,0:68:2343:0:0:0,-20.47,-211.125	0/0:260:260,0:260:9158:0:0:0,-78.2678,-824.206	0/1:202:101,101:101:3599:101:3603:-263.669,0,-263.309	0/0:153:152,1:152:5371:1:36:0,-42.4593,-479.926	0/1:230:108,122:108:3794:122:4338:-321.36,0,-272.422	0/0:363:354,8:354:12560:8:284:0,-83.4288,-1104.33	0/1:175:78,97:78:2755:97:3437:-256.862,0,-195.51	0/0:176:175,0:175:6177:0:0:0,-52.6802,-555.821	0/0:307:306,1:306:10870:1:36:0,-88.8179,-974.609	0/1:191:88,103:88:3090:103:3677:-273.635,0,-220.834	0/0:138:137,1:137:4808:1:36:0,-37.9439,-429.286	0/0:182:182,0:182:6389:0:0:0,-54.7875,-575.106	0/1:262:136,126:136:4719:126:4458:-322.52,0,-346.005	0/0:95:95,0:95:3350:0:0:0,-28.5978,-301.72	0/1:148:67,81:67:2348:81:2895:-216.233,0,-167.026	0/1:139:71,68:71:2514:68:2414:-175.673,0,-184.669	0/0:845:843,1:843:29875:1:36:0,-250.831,-2684.19	0/1:497:428,69:428:15046:69:2439:-70.1401,0,-1204.27	0/1:134:44,90:44:1554:90:3193:-247.256,0,-99.8122	0/0:94:94,0:94:3333:0:0:0,-28.2968,-300.188	0/0:177:177,0:177:6160:0:0:0,-53.2823,-554.514
chr11	19358811	.	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chr11	19866838	.	T	C	74950.6	PASS	AB=0.493969;ABP=5.13197;AC=40;AF=0.212766;AN=188;AO=3333;CIGAR=1X;DP=15679;DPB=15679;DPRA=1.12725;EPP=86.0442;EPPR=96.5205;GTI=0;LEN=1;MEANALT=1.08163;MQM=59.9667;MQMR=59.9967;NS=94;NUMALT=1;ODDS=8.54647;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=117930;QR=439490;RO=12341;RPL=10;RPP=7153.93;RPPR=26549.9;RPR=3323;RUN=1;SAF=1855;SAP=95.6083;SAR=1478;SRF=6564;SRP=111.992;SRR=5777;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/1:293:137,156:137:4877:156:5482:-405.224,0,-350.882	0/0:316:316,0:316:11274:0:0:0,-95.1255,-1014.55	0/1:295:152,143:152:5365:143:5072:-367.818,0,-394.183	0/0:172:172,0:172:6132:0:0:0,-51.7772,-551.979	0/0:77:77,0:77:2749:0:0:0,-23.1793,-247.651	0/0:209:209,0:209:7401:0:0:0,-62.9153,-666.143	0/0:244:244,0:244:8726:0:0:0,-73.4513,-785.317	0/1:141:67,74:67:2396:74:2616:-193.045,0,-173.452	0/0:160:160,0:160:5681:0:0:0,-48.1648,-511.413	0/0:158:158,0:158:5634:0:0:0,-47.5627,-507.182	0/1:133:67,66:67:2404:66:2328:-169.742,0,-176.579	0/1:148:78,70:78:2760:70:2482:-179.081,0,-204.088	0/0:245:245,0:245:8745:0:0:0,-73.7523,-787.042	0/1:146:74,72:74:2640:72:2524:-183.46,0,-193.897	0/0:176:176,0:176:6232:0:0:0,-52.9813,-560.979	0/0:168:168,0:168:5967:0:0:0,-50.573,-537.139	0/1:99:47,52:47:1692:52:1860:-137.878,0,-122.765	0/1:98:40,58:40:1423:58:2063:-156.44,0,-98.8658	0/1:348:180,167:180:6411:167:5917:-427.826,0,-472.262	0/0:259:258,0:258:9200:0:0:0,-77.6657,-827.761	0/1:114:52,62:52:1868:62:2186:-162.688,0,-134.082	0/1:128:74,54:74:2640:54:1927:-135.174,0,-199.315	0/0:205:205,0:205:7256:0:0:0,-61.7111,-653.096	0/0:137:137,0:137:4879:0:0:0,-41.2411,-439.265	0/1:372:184,187:184:6562:187:6596:-481.689,0,-478.619	0/0:324:324,0:324:11475:0:0:0,-97.5337,-1032.64	0/0:75:75,0:75:2659:0:0:0,-22.5772,-239.557	0/0:381:381,0:381:13574:0:0:0,-114.692,-1221.46	0/1:157:89,68:89:3166:68:2436:-172.234,0,-237.903	0/0:168:168,0:168:5992:0:0:0,-50.573,-539.389	0/1:10:5,5:5:176:5:180:-13.5418,0,-13.1747	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:17:17,0:17:593:0:0:0,-5.11751,-53.6947	0/1:341:171,169:171:6098:169:5949:-432.965,0,-446.362	0/1:151:88,63:88:3144:63:2218:-154.426,0,-237.731	0/0:161:160,1:160:5679:1:32:0,-45.2665,-508.032	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:323:154,169:154:5499:169:6006:-443.417,0,-397.805	0/0:80:80,0:80:2839:0:0:0,-24.0824,-255.749	0/0:284:284,0:284:10123:0:0:0,-85.4925,-911.005	0/0:135:135,0:135:4796:0:0:0,-40.639,-431.798	0/0:122:122,0:122:4324:0:0:0,-36.7257,-389.338	0/1:102:46,56:46:1630:56:1992:-148.849,0,-116.282	0/1:174:77,97:77:2751:97:3435:-256.973,0,-195.452	0/0:269:263,6:263:9382:6:216:0,-61.1866,-824.556	0/0:151:150,1:150:5368:1:36:0,-41.8573,-479.654	0/1:235:118,117:118:4205:117:4179:-305.55,0,-307.889	0/0:230:230,0:230:8201:0:0:0,-69.2369,-738.106	0/1:11:5,6:5:176:6:216:-16.4792,0,-12.8737	0/0:258:258,0:258:9186:0:0:0,-77.6657,-826.715	0/0:68:68,0:68:2415:0:0:0,-20.47,-217.606	0/1:32:17,15:17:584:15:519:-37.4038,0,-43.2478	0/0:231:230,1:230:8192:1:36:0,-65.9397,-733.698	0/1:56:29,27:29:1040:27:954:-69.3163,0,-77.0567	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:125:125,0:125:4465:0:0:0,-37.6287,-402.019	0/1:252:127,125:127:4526:125:4402:-320.497,0,-331.649	0/1:24:17,6:17:608:6:216:-12.6354,0,-47.9101	0/1:158:82,76:82:2931:76:2676:-193.436,0,-216.461	0/0:253:250,3:250:8868:3:108:0,-66.0854,-787.951	0/1:172:101,71:101:3582:71:2493:-172.846,0,-270.809	0/0:176:176,0:176:6272:0:0:0,-52.9813,-564.575	0/1:228:108,120:108:3860:120:4231:-312.327,0,-278.961	0/0:207:206,1:206:7334:1:36:0,-58.7149,-656.513	0/1:105:46,59:46:1640:59:2099:-157.571,0,-116.281	0/0:131:131,0:131:4683:0:0:0,-39.4349,-421.631	0/0:230:229,1:229:8134:1:36:0,-65.6386,-728.482	0/1:31:21,10:21:752:10:338:-21.4141,0,-58.6743	0/0:119:119,0:119:4255:0:0:0,-35.8226,-383.129	0/0:134:134,0:134:4742:0:0:0,-40.338,-426.941	0/0:253:253,0:253:9007:0:0:0,-76.1606,-810.616	0/1:231:113,118:113:4052:118:4200:-308.645,0,-295.329	0/0:234:233,1:233:8321:1:32:0,-67.2417,-745.699	0/1:219:123,96:123:4377:96:3386:-239.03,0,-328.179	0/1:13:10,3:10:360:3:108:-6.16178,0,-28.8309	0/1:236:127,109:127:4544:109:3868:-277.272,0,-338.084	0/0:189:188,1:188:6722:1:36:0,-53.2964,-601.456	0/0:292:292,0:292:10368:0:0:0,-87.9008,-933.047	0/1:210:108,102:108:3847:102:3627:-263.42,0,-283.211	0/0:183:183,0:183:6543:0:0:0,-55.0885,-588.953	0/0:195:195,0:195:6944:0:0:0,-58.7008,-625.028	0/1:292:146,146:146:5227:146:5167:-377.273,0,-382.666	0/0:63:63,0:63:2251:0:0:0,-18.9649,-202.853	0/1:106:57,49:57:2044:49:1740:-124.975,0,-152.323	0/1:128:62,66:62:2210:66:2335:-171.875,0,-160.632	0/0:176:176,0:176:6232:0:0:0,-52.9813,-560.982	0/1:267:142,125:142:5050:125:4375:-313.553,0,-374.273	0/1:136:53,83:53:1892:83:2964:-226.054,0,-129.618	0/0:177:177,0:177:6290:0:0:0,-53.2823,-566.198	0/0:215:215,0:215:7648:0:0:0,-64.7214,-688.36
chr11	19867309	.	C	T	43263.6	PASS	AB=0.526195;ABP=31.5649;AC=40;AF=0.212766;AN=188;AO=2524;CIGAR=1X;DP=10902;DPB=10902;DPRA=1.11226;EPP=5483.81;EPPR=18178.2;GTI=0;LEN=1;MEANALT=1.04651;MQM=54.5733;MQMR=59.9817;NS=94;NUMALT=1;ODDS=1.9728;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90379;QR=298131;RO=8370;RPL=0;RPP=5483.81;RPPR=18178.2;RPR=2524;RUN=1;SAF=2524;SAP=5483.81;SAR=0;SRF=8370;SRP=18178.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:164:78,86:78:2768:86:3084:-226.233,0,-199.994	0/0:231:231,0:231:8212:0:0:0,-69.5379,-739.101	0/1:257:121,136:121:4328:136:4868:-359.813,0,-312.331	0/0:45:45,0:45:1581:0:0:0,-13.5463,-142.578	0/0:39:39,0:39:1392:0:0:0,-11.7402,-125.579	0/0:139:139,0:139:4944:0:0:0,-41.8432,-445.114	0/0:158:158,0:158:5608:0:0:0,-47.5627,-504.848	0/1:49:19,30:19:680:30:1076:-81.9777,0,-46.7787	0/0:159:159,0:159:5677:0:0:0,-47.8638,-511.047	0/0:103:103,0:103:3676:0:0:0,-31.0061,-331.044	0/1:88:44,44:44:1545:44:1580:-115.649,0,-112.841	0/1:75:43,32:43:1536:32:1148:-80.6032,0,-115.956	0/0:110:110,0:110:3919:0:0:0,-33.1133,-352.904	0/1:88:45,43:45:1604:43:1540:-112.122,0,-118.16	0/0:80:80,0:80:2852:0:0:0,-24.0824,-256.919	0/0:105:105,0:105:3740:0:0:0,-31.6081,-336.802	0/1:74:30,44:30:1055:44:1576:-119.194,0,-72.9838	0/1:61:30,31:30:1068:31:1116:-81.8918,0,-78.0692	0/1:301:162,139:162:5792:139:4988:-357.769,0,-430.785	0/0:109:108,0:108:3852:0:0:0,-32.5112,-346.517	0/1:150:48,102:48:1720:102:3645:-282.782,0,-109.931	0/1:97:28,69:28:1000:69:2464:-192.651,0,-61.1155	0/0:110:110,0:110:3924:0:0:0,-33.1133,-353.354	0/0:82:82,0:82:2916:0:0:0,-24.6845,-262.677	0/1:384:207,177:207:7349:177:6340:-453.721,0,-545.87	0/0:231:231,0:231:8174:0:0:0,-69.5379,-735.058	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/0:439:439,0:439:15633:0:0:0,-132.152,-1406.68	0/1:183:79,104:79:2796:104:3698:-277.037,0,-196.794	0/0:145:145,0:145:5156:0:0:0,-43.6493,-464.185	0/1:7:5,2:5:180:2:72:-4.71982,0,-14.4449	0/0:19:19,0:19:672:0:0:0,-5.71957,-60.8068	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/1:179:82,97:82:2924:97:3476:-257.394,0,-209.511	0/1:189:74,115:74:2636:115:4109:-311.7,0,-180.463	0/0:67:67,0:67:2379:0:0:0,-20.169,-214.368	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/1:143:75,68:75:2684:68:2421:-174.633,0,-198.758	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/0:181:181,0:181:6417:0:0:0,-54.4864,-577.624	0/0:90:90,0:90:3216:0:0:0,-27.0927,-289.663	0/0:50:50,0:50:1780:0:0:0,-15.0515,-160.483	0/1:76:41,35:41:1476:35:1256:-90.4046,0,-110.258	0/1:124:61,63:61:2180:63:2264:-165.814,0,-159.139	0/0:198:197,0:197:7000:0:0:0,-59.3029,-629.86	0/0:189:189,0:189:6753:0:0:0,-56.8947,-607.844	0/1:172:83,89:83:2972:89:3183:-234.539,0,-215.08	0/0:262:262,0:262:9357:0:0:0,-78.8699,-842.096	0/1:5:4,1:4:144:1:36:-2.09053,0,-11.8085	0/0:196:196,0:196:6996:0:0:0,-59.0019,-629.706	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/1:8:2,6:2:72:6:212:-16.9718,0,-4.42848	0/0:171:169,1:169:6008:1:36:0,-47.9415,-536.381	0/1:44:17,27:17:604:27:968:-74.1279,0,-41.4453	0/0:14:14,0:14:496:0:0:0,-4.21442,-44.9743	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:97:97,0:97:3444:0:0:0,-29.1999,-310.175	0/1:129:68,61:68:2432:61:2191:-158.235,0,-180.303	0/1:13:9,4:9:320:4:140:-9.02303,0,-25.229	0/1:261:112,149:112:3966:149:5344:-402.177,0,-278.563	0/0:188:188,0:188:6689:0:0:0,-56.5936,-602.09	0/1:118:50,68:50:1796:68:2421:-181.814,0,-126.401	0/0:128:127,0:127:4539:0:0:0,-38.2308,-408.466	0/1:210:109,101:109:3900:101:3620:-262.116,0,-287.978	0/0:145:144,1:144:5140:1:36:0,-40.0537,-459.148	0/1:36:14,22:14:496:22:792:-60.538,0,-34.1372	0/0:96:96,0:96:3420:0:0:0,-28.8989,-308.015	0/0:85:85,0:85:3044:0:0:0,-25.5875,-274.19	0/1:53:27,26:27:926:26:932:-68.1802,0,-67.6931	0/0:122:122,0:122:4336:0:0:0,-36.7257,-390.349	0/0:60:60,0:60:2144:0:0:0,-18.0618,-193.228	0/0:95:95,0:95:3368:0:0:0,-28.5978,-303.339	0/1:188:105,83:105:3756:83:2976:-211.283,0,-281.646	0/0:246:246,0:246:8736:0:0:0,-74.0534,-786.241	0/1:168:79,89:79:2812:89:3186:-235.454,0,-202.748	0/1:6:4,2:4:144:2:72:-5.01335,0,-11.5074	0/1:118:51,67:51:1828:67:2397:-180.082,0,-129.279	0/0:169:165,1:165:5892:1:36:0,-46.9274,-526.989	0/0:266:265,0:265:9468:0:0:0,-79.7729,-851.723	0/1:106:50,56:50:1780:56:2016:-149.631,0,-128.574	0/0:73:73,0:73:2604:0:0:0,-21.9752,-234.609	0/0:79:79,0:79:2816:0:0:0,-23.7814,-253.68	0/1:130:67,63:67:2376:63:2256:-163.06,0,-174.965	0/0:44:44,0:44:1568:0:0:0,-13.2453,-141.412	0/1:83:49,34:49:1740:34:1220:-84.1965,0,-131.899	0/1:81:37,44:37:1320:44:1572:-116.769,0,-94.7185	0/0:78:78,0:78:2792:0:0:0,-23.4803,-251.52	0/1:123:50,73:50:1756:73:2620:-198.635,0,-121.294	0/1:50:11,39:11:396:39:1396:-110.787,0,-20.9312	0/0:115:115,0:115:4104:0:0:0,-34.6184,-369.547	0/0:108:108,0:108:3868:0:0:0,-32.5112,-348.315
chr11	19867324	.	A	T	43726.9	PASS	AB=0.519293;ABP=18.9303;AC=40;AF=0.212766;AN=188;AO=2563;CIGAR=1X;DP=11324;DPB=11324;DPRA=1.12089;EPP=5568.49;EPPR=18821.5;GTI=0;LEN=1;MEANALT=1.08889;MQM=54.618;MQMR=59.9797;NS=94;NUMALT=1;ODDS=4.38041;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=91754;QR=313373;RO=8754;RPL=0;RPP=5568.49;RPPR=18821.5;RPR=2563;RUN=1;SAF=2563;SAP=5568.49;SAR=0;SRF=8754;SRP=19012.1;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:167:81,86:81:2896:86:3068:-224.265,0,-210.604	0/0:249:249,0:249:8940:0:0:0,-74.9565,-804.578	0/1:270:128,142:128:4573:142:5077:-374.509,0,-330.456	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/0:39:39,0:39:1404:0:0:0,-11.7402,-126.659	0/0:144:144,0:144:5141:0:0:0,-43.3483,-462.831	0/0:169:169,0:169:6056:0:0:0,-50.8741,-545.142	0/1:49:19,30:19:684:30:1080:-82.3299,0,-47.1399	0/0:173:173,0:173:6190:0:0:0,-52.0782,-557.189	0/0:108:107,1:107:3829:1:36:0,-28.913,-341.207	0/1:88:43,44:43:1540:44:1584:-115.946,0,-112.336	0/1:76:44,32:44:1580:32:1152:-80.6576,0,-119.613	0/0:114:114,0:114:4089:0:0:0,-34.3174,-368.193	0/1:90:45,45:45:1620:45:1611:-117.859,0,-118.997	0/0:83:83,0:83:2976:0:0:0,-24.9855,-268.072	0/0:120:120,0:120:4316:0:0:0,-36.1236,-388.614	0/1:79:33,46:33:1176:46:1652:-124.501,0,-82.3664	0/1:66:33,33:33:1188:33:1180:-86.1529,0,-87.3606	0/1:306:166,140:166:5948:140:5024:-359.495,0,-443.312	0/0:116:116,0:116:4164:0:0:0,-34.9195,-374.941	0/1:151:49,102:49:1756:102:3660:-283.83,0,-112.868	0/1:102:29,72:29:1044:72:2576:-201.156,0,-63.5109	0/0:115:115,0:115:4083:0:0:0,-34.6184,-367.654	0/0:83:83,0:83:2980:0:0:0,-24.9855,-268.432	0/1:400:227,173:227:8121:173:6197:-436.312,0,-610.303	0/0:240:240,0:240:8605:0:0:0,-72.2472,-773.816	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:456:455,0:455:16256:0:0:0,-136.969,-1462.35	0/1:187:83,104:83:2972:104:3698:-275.781,0,-211.42	0/0:153:153,0:153:5447:0:0:0,-46.0576,-490.356	0/1:7:5,2:5:180:2:72:-4.71982,0,-14.4449	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8839	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9144	0/1:181:84,97:84:3016:97:3480:-257.837,0,-217.184	0/1:192:73,119:73:2605:119:4257:-324.382,0,-176.842	0/0:69:69,0:69:2480:0:0:0,-20.7711,-223.453	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:147:75,72:75:2669:72:2576:-187.222,0,-196.203	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/0:198:198,0:198:7100:0:0:0,-59.6039,-639.058	0/0:93:93,0:93:3340:0:0:0,-27.9958,-300.816	0/0:50:50,0:50:1792:0:0:0,-15.0515,-161.562	0/1:79:43,36:43:1529:36:1296:-93.0972,0,-114.12	0/1:126:61,65:61:2184:65:2333:-171.486,0,-158.896	0/0:204:204,0:204:7263:0:0:0,-61.4101,-653.722	0/0:200:200,0:200:7172:0:0:0,-60.206,-645.534	0/1:177:88,89:88:3141:89:3188:-233.377,0,-229.075	0/0:269:269,0:269:9633:0:0:0,-80.9771,-866.92	0/1:7:6,1:6:216:1:36:-1.48847,0,-17.6833	0/0:203:203,0:203:7235:0:0:0,-61.1091,-651.202	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/1:8:2,6:2:72:6:216:-17.3325,0,-4.42848	0/0:180:179,1:179:6428:1:36:0,-50.5922,-573.823	0/1:44:17,27:17:608:27:968:-74.1279,0,-41.8067	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6706	0/0:103:103,0:103:3684:0:0:0,-31.0061,-331.763	0/1:131:72,59:72:2572:59:2120:-151.247,0,-192.295	0/1:14:10,4:10:360:4:129:-7.70597,0,-28.5299	0/1:271:119,152:119:4246:152:5445:-408.249,0,-300.738	0/0:202:201,1:201:7156:1:36:0,-57.2149,-640.501	0/1:122:52,70:52:1868:70:2478:-185.856,0,-131.674	0/0:127:127,0:127:4553:0:0:0,-38.2308,-409.934	0/1:217:111,104:111:3984:104:3698:-267.305,0,-293.668	0/0:150:148,2:148:5328:2:72:0,-38.3202,-472.816	0/1:39:16,23:16:572:23:828:-62.8688,0,-40.0733	0/0:98:98,0:98:3504:0:0:0,-29.5009,-315.571	0/0:88:88,0:88:3126:0:0:0,-26.4906,-281.564	0/1:55:28,27:28:996:27:968:-70.812,0,-73.3982	0/0:126:126,0:126:4516:0:0:0,-37.9298,-406.538	0/0:63:63,0:63:2249:0:0:0,-18.9649,-202.671	0/0:98:98,0:98:3501:0:0:0,-29.5009,-315.299	0/1:192:108,83:108:3880:83:2984:-210.884,0,-291.685	0/0:261:261,0:261:9314:0:0:0,-78.5688,-838.224	0/1:173:80,93:80:2872:93:3328:-246.814,0,-206.638	0/1:7:5,2:5:180:2:72:-4.71232,0,-14.4449	0/1:119:52,67:52:1868:67:2412:-181.108,0,-132.577	0/0:180:179,1:179:6390:1:31:0,-51.1643,-572.166	0/0:277:277,0:277:9899:0:0:0,-83.3853,-890.848	0/1:110:55,55:55:1957:55:1976:-144.831,0,-143.29	0/0:75:75,0:75:2673:0:0:0,-22.5772,-240.814	0/0:82:82,0:82:2952:0:0:0,-24.6845,-265.913	0/1:132:68,64:68:2448:64:2283:-165.41,0,-180.838	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.328	0/1:84:52,32:52:1864:32:1140:-76.9448,0,-142.753	0/1:81:36,45:36:1296:45:1620:-121.064,0,-92.5605	0/0:81:81,0:81:2916:0:0:0,-24.3834,-262.674	0/1:129:53,76:53:1908:76:2728:-206.546,0,-133.165	0/1:49:11,38:11:396:38:1353:-107.225,0,-21.2323	0/0:122:122,0:122:4376:0:0:0,-36.7257,-394.013	0/0:110:109,0:109:3920:0:0:0,-32.8123,-352.631
chr11	19867355	.	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chr11	19867361	.	T	C	43219.3	PASS	AB=0.5238;ABP=26.8867;AC=40;AF=0.212766;AN=188;AO=2545;CIGAR=1X;DP=11095;DPB=11095;DPRA=1.11491;EPP=5529.41;EPPR=18569.1;GTI=0;LEN=1;MEANALT=1;MQM=54.5921;MQMR=59.9851;NS=94;NUMALT=1;ODDS=2.67459;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=90570;QR=305451;RO=8550;RPL=2543;RPP=5512.05;RPPR=18543.1;RPR=2;RUN=1;SAF=2543;SAP=5512.05;SAR=2;SRF=8547;SRP=18543.1;SRR=3;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:164:81,83:81:2892:83:2947:-214.4,0,-211.148	0/0:243:243,0:243:8695:0:0:0,-73.1503,-782.542	0/1:261:122,139:122:4351:139:4934:-364.422,0,-313.197	0/0:45:45,0:45:1603:0:0:0,-13.5463,-144.559	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.061	0/0:137:137,0:137:4883:0:0:0,-41.2411,-439.622	0/0:167:167,0:167:5959:0:0:0,-50.272,-536.419	0/1:49:19,30:19:684:30:1072:-81.6189,0,-47.1399	0/0:168:168,0:168:6013:0:0:0,-50.573,-541.268	0/0:103:103,0:103:3667:0:0:0,-31.0061,-330.235	0/1:85:41,44:41:1456:44:1567:-115.386,0,-105.748	0/1:74:43,31:43:1540:31:1108:-77.3102,0,-116.617	0/0:110:110,0:110:3907:0:0:0,-33.1133,-351.823	0/1:87:43,44:43:1540:44:1568:-114.899,0,-112.703	0/0:81:81,0:81:2882:0:0:0,-24.3834,-259.616	0/0:116:116,0:116:4123:0:0:0,-34.9195,-371.254	0/1:78:32,46:32:1152:46:1648:-124.456,0,-80.5098	0/1:64:33,31:33:1184:31:1070:-76.981,0,-87.6024	0/1:303:164,139:164:5892:139:4928:-352.018,0,-439.175	0/0:113:113,0:113:4013:0:0:0,-34.0164,-361.36	0/1:149:48,101:48:1720:101:3616:-280.479,0,-110.232	0/1:97:29,68:29:1040:68:2410:-187.801,0,-64.7145	0/0:109:109,0:109:3875:0:0:0,-32.8123,-348.944	0/0:81:81,0:81:2908:0:0:0,-24.3834,-261.955	0/1:397:221,176:221:7906:176:6248:-441.631,0,-592.056	0/0:234:234,0:234:8330:0:0:0,-70.441,-749.664	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.752	0/0:450:450,0:450:16137:0:0:0,-135.463,-1452	0/1:185:80,105:80:2876:105:3736:-280.011,0,-203.386	0/0:142:142,0:142:5057:0:0:0,-42.7463,-455.274	0/1:7:5,2:5:180:2:72:-4.71982,0,-14.4449	0/0:21:21,0:21:748:0:0:0,-6.32163,-67.6453	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:29:29,0:29:1036:0:0:0,-8.72987,-93.5539	0/1:176:79,97:79:2819:97:3449:-255.826,0,-200.968	0/1:188:69,119:69:2454:119:4243:-324.079,0,-164.501	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:141:73,68:73:2624:68:2427:-175.78,0,-193.962	0/0:32:32,0:32:1139:0:0:0,-9.63296,-102.818	0/0:195:195,0:195:6958:0:0:0,-58.7008,-626.287	0/0:88:88,0:88:3160:0:0:0,-26.4906,-284.624	0/0:50:50,0:50:1791:0:0:0,-15.0515,-161.472	0/1:79:43,36:43:1544:36:1287:-92.2869,0,-115.472	0/1:126:61,65:61:2178:65:2283:-167.103,0,-158.355	0/0:198:198,0:198:7030:0:0:0,-59.6039,-632.719	0/0:196:196,0:196:7008:0:0:0,-59.0019,-630.782	0/1:177:87,90:87:3082:90:3228:-236.975,0,-224.324	0/0:264:264,0:264:9416:0:0:0,-79.4719,-847.404	0/1:7:6,1:6:216:1:36:-1.48847,0,-17.6833	0/0:200:200,0:200:7163:0:0:0,-60.206,-644.725	0/0:32:32,0:32:1139:0:0:0,-9.63296,-102.818	0/1:8:2,6:2:72:6:212:-16.9718,0,-4.42848	0/0:175:174,1:174:6218:1:36:0,-49.0871,-555.633	0/1:44:17,27:17:612:27:968:-74.1292,0,-42.1681	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.7979	0/0:99:99,0:99:3531:0:0:0,-29.802,-318	0/1:132:71,61:71:2543:61:2171:-155.541,0,-189.384	0/1:13:10,3:10:360:3:104:-5.7836,0,-28.8309	0/1:273:119,154:119:4252:154:5516:-414.072,0,-300.679	0/0:199:198,1:198:7100:1:36:0,-56.3118,-635.464	0/1:121:52,69:52:1872:69:2440:-182.72,0,-132.334	0/0:125:125,0:125:4438:0:0:0,-37.6287,-399.594	0/1:212:109,103:109:3899:103:3686:-267.587,0,-287.285	0/0:149:148,1:148:5277:1:36:0,-41.2578,-471.468	0/1:39:16,23:16:561:23:820:-62.1528,0,-39.077	0/0:95:95,0:95:3387:0:0:0,-28.5978,-305.046	0/0:85:85,0:85:3011:0:0:0,-25.5875,-271.22	0/1:52:25,27:25:884:27:968:-71.7151,0,-64.2248	0/0:123:123,0:123:4385:0:0:0,-37.0267,-394.821	0/0:64:64,0:64:2295:0:0:0,-19.2659,-206.81	0/0:96:96,0:96:3425:0:0:0,-28.8989,-308.463	0/1:188:107,81:107:3827:81:2891:-203.645,0,-288.033	0/0:257:257,0:257:9168:0:0:0,-77.3647,-825.094	0/1:173:79,94:79:2832:94:3312:-245.241,0,-203.04	0/1:6:4,2:4:144:2:72:-5.01335,0,-11.5074	0/1:120:54,66:54:1925:66:2351:-175.352,0,-137.401	0/0:175:175,0:175:6261:0:0:0,-52.6802,-563.583	0/0:274:274,0:274:9819:0:0:0,-82.4822,-883.653	0/1:107:54,53:54:1931:53:1900:-138.918,0,-141.856	0/0:71:71,0:71:2548:0:0:0,-21.3731,-229.57	0/0:81:81,0:81:2877:0:0:0,-24.3834,-259.166	0/1:129:66,63:66:2359:63:2222:-161,0,-173.735	0/0:45:45,0:45:1595:0:0:0,-13.5463,-143.84	0/1:82:49,33:49:1752:33:1171:-80.1075,0,-133.28	0/1:81:36,45:36:1287:45:1612:-120.357,0,-91.7494	0/0:78:78,0:78:2784:0:0:0,-23.4803,-250.801	0/1:128:51,77:51:1819:77:2741:-208.004,0,-125.459	0/1:51:11,40:11:396:40:1428:-113.365,0,-20.6302	0/0:119:119,0:119:4268:0:0:0,-35.8226,-384.297	0/0:108:108,0:108:3863:0:0:0,-32.5112,-347.865
chr11	20661170	.	TCGGCAC	TGGAAA,TGGCAA	225479	PASS	AB=0.541744,0.450371;ABP=68.2753,95.2596;AC=148,40;AF=0.787234,0.212766;AN=188;AO=8627,1954;CIGAR=1M1D2M1X1M1X,1M1D4M1X;DP=10648;DPB=9127.14;DPRA=0,1.24135;EPP=18736.3,4220.05;EPPR=0;GTI=1;LEN=6,6;MEANALT=2.11702,2.72917;MQM=57.7509,59.8531;MQMR=0;NS=94;NUMALT=2;ODDS=0.506367;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=303535,68779;QR=0;RO=0;RPL=0,3;RPP=18736.3,4220.05;RPPR=0;RPR=8627,1951;RUN=1,1;SAF=8627,1954;SAP=18736.3,4246.07;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:142:0,141,0:0:0:141,0:4911,0:-440.948,-42.4452,0,-440.948,-42.4452,-440.948	1/2:62:0,47,15:0:0:47,15:1651,536:-178.41,-44.0594,-29.911,-134.706,0,-130.191	1/1:355:0,355,0:0:0:355,0:12515,0:-1125.1,-106.866,0,-1125.1,-106.866,-1125.1	1/2:276:0,182,91:0:0:182,91:6359,3202:-777.129,-260.649,-205.861,-516.471,0,-489.078	1/1:89:0,88,0:0:0:88,0:3112,0:-279.401,-26.4906,0,-279.401,-26.4906,-279.401	1/1:31:0,31,0:0:0:31,0:1101,0:-99.3995,-9.33193,0,-99.3995,-9.33193,-99.3995	1/1:106:0,104,2:0:0:104,2:3667,68:-329.18,-31.3071,0,-323.665,-25.4519,-323.063	1/1:189:0,188,0:0:0:188,0:6618,0:-595.088,-56.5936,0,-595.088,-56.5936,-595.088	1/2:146:0,100,46:0:0:100,46:3517,1617:-417.988,-131.967,-101.864,-286.372,0,-272.525	1/1:76:0,75,0:0:0:75,0:2631,0:-236.41,-22.5773,0,-236.41,-22.5773,-236.41	1/1:20:0,19,0:0:0:19,0:668,0:-59.917,-5.71957,0,-59.917,-5.71957,-59.917	1/2:79:0,39,39:0:0:39,39:1365,1369:-222.479,-111.466,-99.7262,-111.063,0,-99.3225	1/2:79:0,35,44:0:0:35,44:1221,1556:-226.387,-127.084,-116.548,-99.654,0,-86.4087	1/1:29:0,28,0:0:0:28,0:965,0:-86.8219,-8.42884,0,-86.8219,-8.42884,-86.8219	1/2:56:0,29,26:0:0:29,26:1036,917:-159.041,-74.6583,-65.9284,-84.378,0,-76.5513	1/1:51:0,51,0:0:0:51,0:1792,0:-160.968,-15.3525,0,-160.968,-15.3525,-160.968	1/1:33:0,33,0:0:0:33,0:1176,0:-106.146,-9.93399,0,-106.146,-9.93399,-106.146	1/2:33:0,17,16:0:0:17,16:601,576:-96.2941,-47.3585,-42.241,-49.2922,0,-44.4757	1/2:11:0,5,6:0:0:5,6:180,216:-32.6714,-17.9843,-16.4792,-15.0469,0,-13.2407	1/2:194:0,129,64:0:0:129,64:4554,2265:-554.851,-184.507,-145.674,-370.359,0,-351.093	1/1:143:0,140,1:0:0:140,1:4919,32:-442.169,-42.1442,0,-439.591,-39.5472,-439.29	1/2:238:0,86,149:0:0:86,149:3001,5234:-669.889,-426.084,-400.196,-243.896,0,-199.042	1/2:198:0,102,95:0:0:102,95:3605,3313:-562.844,-269.444,-238.739,-293.411,0,-264.813	1/1:128:0,126,0:0:0:126,0:4423,0:-396.82,-37.9298,0,-396.82,-37.9298,-396.82	1/1:171:0,169,0:0:0:169,0:5923,0:-532.636,-50.8741,0,-532.636,-50.8741,-532.636	1/2:343:0,189,150:0:0:189,150:6621,5254:-965.477,-427.502,-370.608,-537.984,0,-492.83	1/1:301:0,300,0:0:0:300,0:10581,0:-950.642,-90.309,0,-950.642,-90.309,-950.642	1/1:39:0,39,0:0:0:39,0:1383,0:-124.528,-11.7402,0,-124.528,-11.7402,-124.528	1/1:368:0,365,0:0:0:365,0:12915,0:-1160.12,-109.876,0,-1160.12,-109.876,-1160.12	1/2:112:0,52,60:0:0:52,60:1826,2097:-319.505,-170.934,-155.28,-148.921,0,-130.859	1/1:165:0,165,0:0:0:165,0:5819,0:-523.024,-49.67,0,-523.024,-49.67,-523.024	1/2:17:0,13,4:0:0:13,4:454,144:-49.0227,-12.1095,-8.19611,-37.2705,0,-36.0663	1/1:37:0,36,0:0:0:36,0:1240,0:-111.305,-10.8371,0,-111.305,-10.8371,-111.305	1/1:9:0,9,0:0:0:9,0:312,0:-28.3779,-2.70927,0,-28.3779,-2.70927,-28.3779	1/1:9:0,9,0:0:0:9,0:304,0:-27.6629,-2.70927,0,-27.6629,-2.70927,-27.6629	1/1:27:0,27,0:0:0:27,0:960,0:-86.6356,-8.12781,0,-86.6356,-8.12781,-86.6356	1/2:144:0,69,75:0:0:69,75:2429,2671:-415.445,-218.047,-197.276,-197.752,0,-175.175	1/2:201:0,109,90:0:0:109,90:3853,3187:-573.159,-259.627,-226.814,-313.551,0,-286.458	1/1:30:0,30,0:0:0:30,0:1044,0:-93.8794,-9.0309,0,-93.8794,-9.0309,-93.8794	1/1:8:0,8,0:0:0:8,0:282,0:-25.6734,-2.40824,0,-25.6734,-2.40824,-25.6734	1/2:138:0,89,49:0:0:89,49:3107,1725:-392.93,-140.779,-113.987,-252.502,0,-237.751	1/1:21:0,21,0:0:0:21,0:746,0:-67.1809,-6.32163,0,-67.1809,-6.32163,-67.1809	1/1:289:0,288,0:0:0:288,0:10152,0:-912.239,-86.6966,0,-912.239,-86.6966,-912.239	1/1:35:0,35,0:0:0:35,0:1252,0:-112.898,-10.5361,0,-112.898,-10.5361,-112.898	1/1:51:0,51,0:0:0:51,0:1794,0:-161.641,-15.3525,0,-161.641,-15.3525,-161.641	1/2:211:0,111,97:0:0:111,97:3924,3369:-592.51,-273.844,-240.43,-318.66,0,-289.46	1/2:168:0,100,67:0:0:100,67:3546,2353:-480.347,-191.497,-161.394,-288.843,0,-268.674	1/1:309:0,306,1:0:0:306,1:10790,36:-968.852,-92.1152,0,-965.914,-89.1541,-965.613	1/1:167:0,166,0:0:0:166,0:5874,0:-528.252,-49.971,0,-528.252,-49.971,-528.252	1/2:97:0,47,50:0:0:47,50:1668,1764:-279.756,-143.987,-129.839,-136.122,0,-121.071	1/1:135:0,135,0:0:0:135,0:4740,0:-426.398,-40.6391,0,-426.398,-40.6391,-426.398	1/2:18:0,11,7:0:0:11,7:381,252:-51.697,-20.9217,-17.6104,-31.1291,0,-29.0219	1/1:190:0,189,0:0:0:189,0:6670,0:-599.706,-56.8947,0,-599.706,-56.8947,-599.706	1/1:62:0,61,0:0:0:61,0:2113,0:-189.931,-18.3628,0,-189.931,-18.3628,-189.931	1/2:37:0,17,18:0:0:17,18:608,625:-100.377,-50.7954,-45.6779,-49.5753,0,-44.1567	1/1:175:0,175,0:0:0:175,0:6062,0:-545.264,-52.6803,0,-545.264,-52.6803,-545.264	1/2:84:0,43,37:0:0:43,37:1492,1266:-223.921,-102.737,-89.7924,-121.173,0,-110.034	1/2:11:0,6,5:0:0:6,5:214,176:-32.1122,-14.6799,-12.8737,-17.7862,0,-16.281	1/1:11:0,11,0:0:0:11,0:389,0:-35.2636,-3.31133,0,-35.2636,-3.31133,-35.2636	1/1:86:0,85,0:0:0:85,0:3005,0:-269.747,-25.5876,0,-269.747,-25.5876,-269.747	1/2:75:0,34,40:0:0:34,40:1208,1409:-213.109,-114.701,-104.466,-98.4022,0,-86.361	1/2:7:0,1,6:0:0:1,6:36,216:-20.9208,-17.9843,-17.6833,-3.29624,0,-1.49006	1/2:256:0,131,122:0:0:131,122:4647,4261:-724.178,-346.598,-307.164,-377.588,0,-340.862	1/1:307:0,305,2:0:0:305,2:10783,72:-968.943,-91.8142,0,-963.068,-85.5795,-962.466	1/2:64:0,35,29:0:0:35,29:1215,983:-177.523,-80.0418,-69.5057,-97.8214,0,-89.0915	1/1:123:0,123,0:0:0:123,0:4299,0:-386.752,-37.0267,0,-386.752,-37.0267,-386.752	1/2:227:0,139,87:0:0:139,87:4889,3067:-646.993,-249.735,-207.892,-397.282,0,-371.093	1/1:173:0,169,3:0:0:169,3:5910,108:-530.352,-50.8741,0,-521.54,-42.0572,-520.637	1/2:18:0,9,9:0:0:9,9:316,324:-52.4628,-26.7966,-24.0873,-26.0213,0,-23.3121	1/1:76:0,76,0:0:0:76,0:2640,0:-237.573,-22.8783,0,-237.573,-22.8783,-237.573	1/1:43:0,43,0:0:0:43,0:1523,0:-137.001,-12.9443,0,-137.001,-12.9443,-137.001	1/2:21:0,15,6:0:0:15,6:532,212:-60.8927,-17.5616,-13.0462,-43.6839,0,-41.8777	1/1:146:0,145,0:0:0:145,0:5112,0:-459.75,-43.6494,0,-459.75,-43.6494,-459.75	1/1:67:0,66,1:0:0:66,1:2315,36:-208.196,-19.868,0,-205.258,-16.5707,-204.957	1/1:223:0,222,0:0:0:222,0:7793,0:-700.178,-66.8287,0,-700.178,-66.8287,-700.178	1/2:161:0,78,80:0:0:78,80:2752,2848:-456.103,-232.158,-208.678,-223.98,0,-199.898	1/1:131:0,131,0:0:0:131,0:4600,0:-414.025,-39.4349,0,-414.025,-39.4349,-414.025	1/2:64:0,27,37:0:0:27,37:947,1313:-184.394,-107.332,-99.2038,-77.4143,0,-66.2762	1/2:13:0,8,5:0:0:8,5:280,172:-37.0896,-14.3128,-11.9046,-23.1229,0,-21.6178	1/2:125:0,65,60:0:0:65,60:2297,2127:-360.458,-173.549,-153.982,-187.263,0,-169.201	1/1:117:0,117,0:0:0:117,0:4123,0:-370.615,-35.2205,0,-370.615,-35.2205,-370.615	1/1:335:0,331,1:0:0:331,1:11690,36:-1050.74,-99.6409,0,-1047.8,-96.6759,-1047.5	1/2:46:0,28,18:0:0:28,18:973,644:-131.936,-52.8652,-44.4363,-79.4243,0,-74.0058	1/1:62:0,61,0:0:0:61,0:2097,0:-188.311,-18.3628,0,-188.311,-18.3628,-188.311	1/1:25:0,25,0:0:0:25,0:882,0:-79.6215,-7.52575,0,-79.6215,-7.52575,-79.6215	1/2:108:0,63,45:0:0:63,45:2214,1607:-311.527,-131.372,-112.407,-180.51,0,-166.963	1/1:25:0,24,0:0:0:24,0:839,0:-75.274,-7.22472,0,-75.274,-7.22472,-75.274	1/2:53:0,23,30:0:0:23,30:802,1068:-152.208,-87.4012,-80.4775,-65.1571,0,-56.1262	1/1:39:0,38,0:0:0:38,0:1340,0:-120.365,-11.4391,0,-120.365,-11.4391,-120.365	1/1:19:0,19,0:0:0:19,0:669,0:-60.5238,-5.71957,0,-60.5238,-5.71957,-60.5238	1/2:57:0,22,35:0:0:22,35:781,1240:-164.986,-101.357,-94.7347,-63.9829,0,-53.4469	1/2:64:0,31,33:0:0:31,33:1089,1180:-185.11,-96.5731,-87.2412,-88.8909,0,-78.9569	1/1:257:0,256,1:0:0:256,1:9043,36:-811.125,-77.0637,0,-808.188,-73.7664,-807.887	1/1:81:0,81,0:0:0:81,0:2838,0:-255.329,-24.3834,0,-255.329,-24.3834,-255.329
chr11	21380100	.	G	A	143184	PASS	AB=0.585588;ABP=205.218;AC=147;AF=0.781915;AN=188;AO=6631;CIGAR=1X;DP=7955;DPB=7955;DPRA=0;EPP=14402;EPPR=2871.53;GTI=2;LEN=1;MEANALT=1.03191;MQM=59.4315;MQMR=59.9235;NS=94;NUMALT=1;ODDS=3.95738;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=237194;QR=47369;RO=1321;RPL=6631;RPP=14402;RPPR=2871.53;RPR=0;RUN=1;SAF=0;SAP=14402;SAR=6631;SRF=0;SRP=2871.53;SRR=1321;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:22:0,22:0:0:22:792:-71.6,-6.62266,0	0/1:35:15,20:15:540:20:716:-54.2317,0,-38.4005	1/1:38:0,38:0:0:38:1362:-122.878,-11.4391,0	0/1:40:17,23:17:612:23:828:-62.7556,0,-43.3722	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:12:0,12:0:0:12:432:-39.213,-3.61236,0	1/1:49:0,49:0:0:49:1760:-158.679,-14.7505,0	1/1:85:0,85:0:0:85:3048:-274.244,-25.5876,0	0/1:37:18,19:18:648:19:684:-50.7334,0,-47.5138	1/1:40:0,40:0:0:40:1436:-129.534,-12.0412,0	1/1:186:0,186:0:0:186:6680:-601.227,-55.9916,0	0/1:39:20,19:20:720:19:666:-48.5044,0,-53.3886	0/1:31:10,21:10:360:21:756:-58.753,0,-23.4124	1/1:33:0,33:0:0:33:1184:-106.839,-9.93399,0	0/1:28:8,20:8:288:20:720:-56.6999,0,-17.8386	1/1:38:0,38:0:0:38:1368:-123.408,-11.4391,0	1/1:26:0,26:0:0:26:936:-84.4873,-7.82678,0	0/1:21:10,11:10:360:11:396:-29.5378,0,-26.4227	0/1:109:47,62:47:1688:62:2224:-167.505,0,-119.395	0/1:55:25,30:25:896:30:1075:-80.4718,0,-64.4037	1/1:29:0,29:0:0:29:1021:-92.1938,-8.72987,0	0/1:31:10,21:10:360:21:741:-57.6769,0,-23.4124	0/1:11:2,9:2:72:9:323:-26.1014,0,-3.52539	1/1:53:0,53:0:0:53:1885:-169.602,-15.9546,0	1/1:34:0,34:0:0:34:1220:-110.098,-10.235,0	0/1:124:36,88:36:1296:88:3153:-246.034,0,-79.6162	1/1:84:0,84:0:0:84:3016:-271.508,-25.2865,0	1/1:16:0,16:0:0:16:576:-52.1704,-4.81648,0	1/1:236:0,236:0:0:236:8465:-761.269,-71.0431,0	0/1:34:11,23:11:396:23:809:-62.8851,0,-25.7477	1/1:36:0,36:0:0:36:1281:-115.583,-10.8371,0	0/1:427:160,266:160:5732:266:9498:-726.1,0,-387.495	1/1:346:0,346:0:0:346:12396:-1114.94,-104.156,0	1/1:391:0,390:0:0:390:13942:-1252.9,-117.402,0	1/1:438:0,437:0:0:437:15591:-1402.29,-131.55,0	1/1:320:1,319:1:36:319:11382:-1020.27,-92.7313,0	0/1:81:40,41:40:1436:41:1468:-107.975,0,-105.154	0/1:67:24,43:24:852:43:1544:-119.077,0,-56.8314	1/1:177:0,177:0:0:177:6340:-570.603,-53.2823,0	1/1:183:0,183:0:0:183:6537:-588.165,-55.0885,0	0/1:39:16,23:16:576:23:824:-62.7408,0,-40.4325	1/1:142:0,142:0:0:142:5093:-458.457,-42.7463,0	1/1:77:0,77:0:0:77:2765:-249.028,-23.1793,0	1/1:21:0,21:0:0:21:756:-68.2325,-6.32163,0	1/1:32:0,32:0:0:32:1152:-103.888,-9.63296,0	0/1:42:9,33:9:324:33:1184:-94.2209,0,-16.8626	0/1:29:10,19:10:360:19:672:-52.0559,0,-24.0144	1/1:69:0,69:0:0:69:2475:-222.985,-20.7711,0	1/1:37:0,37:0:0:37:1317:-118.83,-11.1381,0	0/1:32:7,25:7:248:25:877:-69.6122,0,-13.0312	1/1:103:0,103:0:0:103:3688:-332.022,-31.0061,0	0/1:190:47,143:47:1677:143:5117:-403.437,0,-94.0195	1/1:57:0,57:0:0:57:2024:-182.398,-17.1587,0	1/1:11:0,11:0:0:11:396:-35.9827,-3.31133,0	0/1:150:60,90:60:2139:90:3232:-245.886,0,-147.608	0/1:36:11,25:11:392:25:880:-68.6621,0,-24.783	0/1:19:7,12:7:252:12:428:-33.0301,0,-17.2955	0/1:128:57,71:57:2048:71:2556:-191.639,0,-146.06	1/1:375:0,375:0:0:375:13382:-1203.71,-112.886,0	1/1:16:1,15:1:32:15:536:-45.3755,-1.61717,0	0/1:43:20,23:20:716:23:804:-59.5708,0,-51.8234	0/1:135:57,78:57:2052:78:2782:-209.966,0,-144.312	0/1:42:10,32:10:356:32:1152:-91.3442,0,-19.738	1/1:116:0,116:0:0:116:4157:-374.114,-34.9195,0	0/1:15:2,13:2:72:13:460:-37.2151,0,-2.32127	1/1:42:0,42:0:0:42:1489:-134.298,-12.6433,0	0/1:58:15,43:15:540:43:1544:-121.792,0,-31.4768	1/1:56:0,56:0:0:56:1997:-179.907,-16.8577,0	0/1:111:56,55:56:2008:55:1976:-144.686,0,-147.579	1/1:37:0,37:0:0:37:1332:-120.172,-11.1381,0	1/1:54:1,53:1:36:53:1908:-168.397,-12.6573,0	0/1:108:37,71:37:1317:71:2527:-194.953,0,-86.3186	1/1:36:0,36:0:0:36:1267:-114.311,-10.8371,0	1/1:27:0,27:0:0:27:964:-86.2968,-8.12781,0	1/1:38:1,37:1:36:37:1328:-116.224,-7.84087,0	0/1:39:14,25:14:500:25:900:-69.5762,0,-33.596	1/1:34:0,34:0:0:34:1194:-107.644,-10.235,0	0/1:15:10,5:10:360:5:180:-12.0283,0,-27.7341	0/1:273:178,95:178:6388:95:3408:-224.709,0,-492.826	0/1:29:10,19:10:360:19:680:-52.7993,0,-24.0144	1/1:36:0,36:0:0:36:1292:-116.389,-10.8371,0	1/1:114:0,114:0:0:114:4100:-369.118,-34.3174,0	0/1:58:23,35:23:820:35:1260:-96.2352,0,-56.6628	1/1:36:1,35:1:36:35:1256:-109.74,-7.23881,0	1/1:29:0,29:0:0:29:1040:-93.9015,-8.72987,0	0/1:50:18,32:18:648:32:1140:-87.8507,0,-43.6004	1/1:28:0,28:0:0:28:1000:-90.2939,-8.42884,0	0/1:29:18,11:18:644:11:396:-27.2529,0,-49.5607	1/1:25:0,25:0:0:25:900:-81.3037,-7.52575,0	1/1:198:0,198:0:0:198:7094:-638.251,-59.6039,0	0/1:301:143,158:143:5136:158:5650:-417.546,0,-371.64	0/1:37:28,9:28:1004:9:315:-17.5473,0,-79.5368	1/1:4:0,4:0:0:4:129:-11.9277,-1.20412,0	1/1:36:0,36:0:0:36:1284:-115.856,-10.8371,0
chr11	21380106	.	C	A,G	171842	PASS	AB=0.5813,0.417433;ABP=184.14,189.833;AC=147,41;AF=0.781915,0.218085;AN=188;AO=6560,1321;CIGAR=1X,1X;DP=7887;DPB=7887;DPRA=0,0.905553;EPP=14247.9,2871.53;EPPR=0;GTI=2;LEN=1,1;MEANALT=1.54255,2.08889;MQM=59.4428,59.9387;MQMR=0;NS=94;NUMALT=2;ODDS=4.51618;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=234158,47348;QR=0;RO=0;RPL=6560,1321;RPP=14247.9,2871.53;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=14247.9,2871.53;SAR=6560,1321;SRF=0;SRP=0;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:22:0,22,0:0:0:22,0:788,0:-71.2391,-6.62266,0,-71.2391,-6.62266,-71.2391	1/2:34:0,20,14:0:0:20,14:716,504:-99.8718,-41.4837,-35.4631,-58.7471,0,-54.5327	1/1:38:0,38,0:0:0:38,0:1355,0:-122.242,-11.4391,0,-122.242,-11.4391,-122.242	1/2:40:0,23,17:0:0:23,17:809,612:-116.097,-50.2959,-43.3722,-66.1573,0,-61.0398	1/1:19:0,19,0:0:0:19,0:684,0:-61.8903,-5.71957,0,-61.8903,-5.71957,-61.8903	1/1:12:0,12,0:0:0:12,0:432,0:-39.213,-3.61236,0,-39.213,-3.61236,-39.213	1/1:49:0,49,0:0:0:49,0:1764,0:-159.039,-14.7505,0,-159.039,-14.7505,-159.039	1/1:84:0,84,0:0:0:84,0:2936,0:-264.399,-25.2865,0,-264.399,-25.2865,-264.399	1/2:37:0,19,18:0:0:19,18:684,648:-109.025,-53.2333,-47.5138,-56.1519,0,-50.7334	1/1:41:0,41,0:0:0:41,0:1472,0:-132.767,-12.3422,0,-132.767,-12.3422,-132.767	1/1:189:0,189,0:0:0:189,0:6744,0:-606.99,-56.8947,0,-606.99,-56.8947,-606.99	1/2:38:0,18,20:0:0:18,20:644,720:-111.612,-59.1082,-53.6896,-52.8629,0,-46.8423	1/2:31:0,21,10:0:0:21,10:737,360:-89.6825,-29.734,-23.4124,-60.3054,0,-57.2951	1/1:34:0,34,0:0:0:34,0:1224,0:-110.438,-10.235,0,-110.438,-10.235,-110.438	1/2:28:0,20,8:0:0:20,8:716,288:-82.247,-23.8592,-17.8386,-58.7471,0,-56.3389	1/1:37:0,37,0:0:0:37,0:1317,0:-118.819,-11.1381,0,-118.819,-11.1381,-118.819	1/1:24:0,24,0:0:0:24,0:856,0:-77.3294,-7.22472,0,-77.3294,-7.22472,-77.3294	1/2:21:0,11,10:0:0:11,10:396,360:-61.9228,-29.734,-26.4227,-32.5481,0,-29.5378	1/2:108:0,61,47:0:0:61,47:2192,1688:-316.778,-138.059,-119.696,-179.079,0,-164.93	1/2:55:0,30,25:0:0:30,25:1080,892:-161.107,-73.0739,-64.043,-88.3913,0,-80.8656	1/1:28:0,28,0:0:0:28,0:1000,0:-90.3089,-8.42884,0,-90.3089,-8.42884,-90.3089	1/2:30:0,20,10:0:0:20,10:693,360:-86.0243,-29.734,-23.7134,-56.6456,0,-53.6353	1/2:10:0,8,2:0:0:8,2:279,72:-28.9172,-6.23466,-3.82642,-23.0401,0,-22.4381	1/1:52:0,52,0:0:0:52,0:1838,0:-165.372,-15.6536,0,-165.372,-15.6536,-165.372	1/1:34:0,34,0:0:0:34,0:1205,0:-108.747,-10.235,0,-108.747,-10.235,-108.747	1/2:125:0,88,37:0:0:88,37:3152,1332:-365.725,-109.044,-82.5536,-257.039,0,-245.901	1/1:82:0,82,0:0:0:82,0:2929,0:-263.681,-24.6845,0,-263.681,-24.6845,-263.681	1/1:16:0,16,0:0:0:16,0:576,0:-52.1704,-4.81648,0,-52.1704,-4.81648,-52.1704	1/1:237:0,237,0:0:0:237,0:8485,0:-763.079,-71.3441,0,-763.079,-71.3441,-763.079	1/2:30:0,20,10:0:0:20,10:716,360:-88.122,-29.734,-23.7134,-58.7471,0,-55.7368	1/1:37:0,37,0:0:0:37,0:1317,0:-118.715,-11.1381,0,-118.715,-11.1381,-118.715	1/2:428:0,267,160:0:0:267,160:9551,5710:-1243.58,-465.626,-385.251,-778.101,0,-729.936	1/1:345:0,345,0:0:0:345,0:12325,0:-1108.26,-103.855,0,-1108.26,-103.855,-1108.26	1/1:380:0,380,0:0:0:380,0:13538,0:-1216.91,-114.391,0,-1216.91,-114.391,-1216.91	1/1:434:0,434,0:0:0:434,0:15454,0:-1390.23,-130.647,0,-1390.23,-130.647,-1390.23	1/1:316:0,315,1:0:0:315,1:11190,36:-1006.15,-94.8245,0,-1003.21,-91.5272,-1002.91	1/2:81:0,42,39:0:0:42,39:1508,1404:-237.873,-114.919,-102.276,-123.313,0,-111.573	1/2:67:0,43,24:0:0:43,24:1540,864:-196.441,-70.8578,-57.9136,-125.942,0,-118.717	1/1:176:0,176,0:0:0:176,0:6313,0:-568.161,-52.9813,0,-568.161,-52.9813,-568.161	1/1:184:0,184,0:0:0:184,0:6544,0:-588.797,-55.3895,0,-588.797,-55.3895,-588.797	1/2:39:0,23,16:0:0:23,16:828,572:-114.554,-46.9946,-40.0709,-67.9181,0,-63.1016	1/1:141:0,141,0:0:0:141,0:5060,0:-455.477,-42.4452,0,-455.477,-42.4452,-455.477	1/1:74:0,74,0:0:0:74,0:2618,0:-235.817,-22.2762,0,-235.817,-22.2762,-235.817	1/1:21:0,21,0:0:0:21,0:756,0:-68.2325,-6.32163,0,-68.2325,-6.32163,-68.2325	1/1:33:0,33,0:0:0:33,0:1173,0:-105.771,-9.93399,0,-105.771,-9.93399,-105.771	1/2:43:0,33,10:0:0:33,10:1180,352:-125.225,-29.0079,-19.0739,-96.5699,0,-93.5596	1/2:26:0,16,10:0:0:16,10:568,360:-75.9951,-29.734,-24.9175,-46.619,0,-43.6087	1/1:68:0,68,0:0:0:68,0:2448,0:-220.551,-20.47,0,-220.551,-20.47,-220.551	1/1:37:0,37,0:0:0:37,0:1328,0:-119.822,-11.1381,0,-119.822,-11.1381,-119.822	1/2:33:0,26,7:0:0:26,7:932,252:-96.9343,-20.9217,-13.095,-76.3721,0,-74.2649	1/1:101:0,101,0:0:0:101,0:3609,0:-324.916,-30.404,0,-324.916,-30.404,-324.916	1/2:189:0,141,48:0:0:141,48:5053,1720:-552.709,-140.636,-98.1908,-412.431,0,-397.981	1/1:58:0,57,1:0:0:57,1:2044,36:-183.753,-17.1587,0,-180.816,-13.8615,-180.515	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/2:146:0,86,60:0:0:86,60:3072,2152:-426.266,-175.86,-149.971,-250.764,0,-232.702	1/2:34:0,22,12:0:0:22,12:773,432:-98.5015,-35.6088,-28.9862,-63.2494,0,-59.6371	1/2:19:0,10,9:0:0:10,9:360,324:-56.0482,-26.7827,-23.7724,-29.6246,0,-26.9154	1/2:126:0,70,56:0:0:70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chr11	21762441	.	A	T	34452.8	PASS	AB=0.469333;ABP=39.3701;AC=40;AF=0.212766;AN=188;AO=2097;CIGAR=1X;DP=9956;DPB=9956;DPRA=1.21048;EPP=4556.59;EPPR=17066.4;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.8903;MQMR=59.9146;NS=94;NUMALT=1;ODDS=9.16881;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74998;QR=280929;RO=7858;RPL=0;RPP=4556.59;RPPR=17066.4;RPR=2097;RUN=1;SAF=0;SAP=4556.59;SAR=2097;SRF=0;SRP=17066.4;SRR=7858;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:51:51,0:51:1810:0:0:0,-15.3525,-163.18	0/1:85:43,42:43:1533:42:1495:-109.186,0,-112.674	0/0:193:193,0:193:6895:0:0:0,-58.0988,-620.606	0/1:258:138,120:138:4956:120:4279:-307.614,0,-367.244	0/0:55:55,0:55:1959:0:0:0,-16.5566,-176.581	0/0:44:44,0:44:1571:0:0:0,-13.2453,-141.681	0/0:89:89,0:89:3159:0:0:0,-26.7917,-284.523	0/0:145:145,0:145:5208:0:0:0,-43.6493,-468.847	0/1:97:56,41:56:2008:41:1464:-102.855,0,-151.793	0/0:107:107,0:107:3840:0:0:0,-32.2102,-345.795	0/0:70:70,0:70:2512:0:0:0,-21.0721,-225.702	0/1:156:70,86:70:2507:86:3072:-229.742,0,-178.914	0/1:104:56,48:56:1987:48:1720:-123.777,0,-147.797	0/0:79:79,0:79:2817:0:0:0,-23.7814,-253.768	0/1:84:44,40:44:1580:40:1440:-104.609,0,-117.205	0/0:83:83,0:83:2930:0:0:0,-24.9855,-263.91	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/1:38:18,20:18:648:20:716:-53.3286,0,-47.2127	0/1:44:25,19:25:900:19:680:-48.2838,0,-68.0757	0/1:163:79,84:79:2836:84:3004:-221.521,0,-205.783	0/0:160:159,1:159:5688:1:36:0,-44.5665,-508.418	0/1:119:41,78:41:1468:78:2799:-216.324,0,-96.5935	0/1:113:64,49:64:2281:49:1752:-123.939,0,-171.531	0/0:86:86,0:86:3083:0:0:0,-25.8886,-277.697	0/0:70:70,0:70:2516:0:0:0,-21.0721,-226.681	0/1:249:165,84:165:5924:84:2984:-193.824,0,-458.293	0/0:256:256,0:256:9170:0:0:0,-77.0637,-825.27	0/0:45:45,0:45:1598:0:0:0,-13.5463,-144.095	0/0:269:269,0:269:9631:0:0:0,-80.9771,-866.722	0/1:129:61,68:61:2178:68:2416:-178.856,0,-157.452	0/0:75:75,0:75:2677:0:0:0,-22.5772,-241.166	0/1:14:7,7:7:252:7:248:-18.4498,0,-18.8112	0/0:59:59,0:59:2111:0:0:0,-17.7608,-190.258	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/0:26:26,0:26:923:0:0:0,-7.82678,-83.3868	0/0:38:38,0:38:1364:0:0:0,-11.4391,-123.059	0/1:219:126,93:126:4497:93:3327:-233.72,0,-338.966	0/1:139:70,69:70:2500:69:2480:-181.608,0,-183.388	0/0:88:88,0:88:3128:0:0:0,-26.4906,-281.738	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:114:114,0:114:4058:0:0:0,-34.3174,-365.399	0/0:54:54,0:54:1940:0:0:0,-16.2556,-174.869	0/0:202:202,0:202:7220:0:0:0,-60.8081,-649.853	0/0:82:82,0:82:2916:0:0:0,-24.6845,-262.674	0/0:62:62,0:62:2223:0:0:0,-18.6639,-200.333	0/1:129:55,74:55:1961:74:2656:-200.45,0,-137.931	0/1:141:72,69:72:2555:69:2466:-179.744,0,-187.749	0/0:142:141,1:141:5072:1:36:0,-39.148,-453.02	0/0:117:117,0:117:4208:0:0:0,-35.2205,-378.892	0/1:127:78,49:78:2776:49:1756:-120.09,0,-211.845	0/0:115:115,0:115:4136:0:0:0,-34.6184,-372.419	0/1:16:11,5:11:396:5:172:-11.0015,0,-31.1629	0/0:191:189,2:189:6746:2:72:0,-50.66,-600.362	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6023	0/1:15:6,9:6:216:9:320:-24.6269,0,-15.2751	0/1:209:113,95:113:3982:95:3412:-244.318,0,-295.593	0/1:70:32,38:32:1148:38:1360:-101.628,0,-82.5544	0/1:20:11,9:11:396:9:320:-23.1208,0,-29.9621	0/0:13:13,0:13:464:0:0:0,-3.91339,-42.0975	0/0:102:102,0:102:3659:0:0:0,-30.7051,-329.509	0/1:120:67,53:67:2408:53:1892:-134.428,0,-180.853	0/1:25:17,8:17:603:8:288:-18.7393,0,-47.0738	0/1:242:115,127:115:4115:127:4551:-336.899,0,-297.677	0/0:151:150,1:150:5396:1:36:0,-41.8573,-482.166	0/1:55:30,25:30:1076:25:892:-64.0406,0,-80.5962	0/0:89:89,0:89:3164:0:0:0,-26.7917,-284.98	0/1:152:86,66:86:3092:66:2367:-167.526,0,-232.744	0/0:218:218,0:218:7804:0:0:0,-65.6245,-702.379	0/1:59:35,24:35:1244:24:848:-58.8789,0,-94.5005	0/0:91:91,0:91:3231:0:0:0,-27.3937,-291.007	0/0:60:59,1:59:2100:1:36:0,-14.4635,-185.671	0/1:49:23,26:23:819:26:932:-69.4484,0,-59.2811	0/0:244:244,0:244:8723:0:0:0,-73.4513,-785.053	0/0:115:115,0:115:4062:0:0:0,-34.6184,-365.763	0/0:143:143,0:143:5119:0:0:0,-43.0473,-460.844	0/1:215:126,89:126:4524:89:3188:-222.422,0,-342.601	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.279	0/1:129:84,45:84:3020:45:1612:-106.536,0,-233.19	0/1:31:19,12:19:680:12:424:-29.1645,0,-52.1972	0/1:136:64,72:64:2277:72:2580:-191.504,0,-164.247	0/0:120:120,0:120:4286:0:0:0,-36.1236,-385.917	0/0:186:185,1:185:6597:1:36:0,-52.3933,-590.199	0/1:66:38,28:38:1355:28:1004:-70.8079,0,-102.382	0/0:91:91,0:91:3252:0:0:0,-27.3937,-292.902	0/0:66:66,0:66:2347:0:0:0,-19.868,-211.489	0/1:102:56,46:56:2007:46:1639:-117.093,0,-150.198	0/0:29:29,0:29:1020:0:0:0,-8.72987,-92.109	0/1:91:49,42:49:1760:42:1504:-108.261,0,-131.287	0/0:92:92,0:92:3284:0:0:0,-27.6948,-295.774	0/0:88:88,0:88:3155:0:0:0,-26.4906,-284.146	0/1:166:90,76:90:3213:76:2711:-194.26,0,-239.42	0/1:75:21,54:21:752:54:1940:-152.287,0,-45.429	0/0:178:178,0:178:6355:0:0:0,-53.5833,-572.036	0/0:111:110,1:110:3948:1:36:0,-29.8161,-351.912
chr11	25917223	.	CTTGTGAGG	CTTGTGAGTTGTGAGG	18314.3	PASS	AB=0.301768;ABP=1798.01;AC=27;AF=0.143617;AN=188;AO=1591;CIGAR=1M7I8M;DP=19017;DPB=20280.3;DPRA=1.00702;EPP=3457.82;EPPR=36247.1;GTI=2;LEN=7;MEANALT=2.70968;MQM=49.6229;MQMR=52.6632;NS=94;NUMALT=1;ODDS=1.25007;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=16;PQR=16;PRO=0.5;QA=55537;QR=583170;RO=16691;RPL=1591;RPP=3457.82;RPPR=9.24995;RPR=0;RUN=1;SAF=1591;SAP=3457.82;SAR=0;SRF=8455;SRP=9.24995;SRR=8236;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	0/0:44:44,0:44:1529:0:0:0,-13.2453,-135.674	0/0:254:160,0:160:5614:0:0:0,-48.1648,-496.9	0/0:345:344,0:344:12017:0:0:0,-103.554,-1070.76	0/1:409:297,104:297:10298:104:3588:-200.828,0,-799.41	0/0:125:125,0:125:4393:0:0:0,-37.6287,-392.206	0/0:132:130,0:130:4530:0:0:0,-39.1339,-401.643	0/0:409:408,0:408:14175:0:0:0,-122.82,-1266.91	0/0:399:393,0:393:13782:0:0:0,-118.305,-1223.01	0/0:138:101,0:101:3538:0:0:0,-30.404,-313.624	0/0:310:307,0:307:10710:0:0:0,-92.4162,-959.733	0/0:203:201,0:201:7049:0:0:0,-60.507,-628.427	0/0:156:103,0:103:3592:0:0:0,-31.0061,-317.611	0/0:149:99,0:99:3457:0:0:0,-29.802,-307.08	0/0:167:166,0:166:5749:0:0:0,-49.971,-512.947	0/1:167:115,52:115:4003:52:1816:-112.478,0,-308.804	0/0:153:152,0:152:5310:0:0:0,-45.7566,-473.782	0/0:159:113,0:113:3953:0:0:0,-34.0164,-350.947	0/0:127:89,0:89:3121:0:0:0,-26.7917,-277.29	0/0:112:77,0:77:2712:0:0:0,-23.1793,-241.382	0/1:422:300,119:300:10528:119:4153:-245.162,0,-814.552	0/0:389:387,0:387:13497:0:0:0,-116.499,-1203.8	0/1:118:53,63:53:1857:63:2189:-160.76,0,-130.963	0/1:110:55,55:55:1914:55:1943:-141.253,0,-138.436	0/0:90:90,0:90:3120:0:0:0,-27.0927,-276.943	0/0:171:170,0:170:5972:0:0:0,-51.1751,-533.621	0/1:586:412,173:412:14473:173:6042:-363.828,0,-1121.46	0/0:579:576,0:576:20112:0:0:0,-173.393,-1788.77	0/0:111:110,0:110:3833:0:0:0,-33.1133,-342.753	0/0:721:716,0:716:25087:0:0:0,-215.537,-2246.55	0/1:177:117,57:117:4086:57:1989:-126.047,0,-306.89	0/0:268:263,0:263:9180:0:0:0,-79.1709,-822.756	0/1:14:4,10:4:139:10:342:-26.806,0,-8.4591	0/0:30:30,0:30:1053:0:0:0,-9.0309,-94.1653	0/0:9:9,0:9:313:0:0:0,-2.70927,-28.1906	0/0:22:22,0:22:771:0:0:0,-6.62266,-68.0821	0/0:30:30,0:30:1040:0:0:0,-9.0309,-92.1281	0/1:390:274,110:274:9586:110:3834:-227.6,0,-744.106	0/1:230:159,68:159:5552:68:2371:-144.378,0,-427.468	0/0:180:180,0:180:6303:0:0:0,-54.1854,-561.408	0/0:7:7,0:7:244:0:0:0,-2.10721,-22.2996	0/1:244:170,67:170:5871:67:2356:-139.84,0,-452.651	0/0:109:109,0:109:3799:0:0:0,-32.8123,-338.101	0/0:208:208,0:208:7318:0:0:0,-62.6142,-649.442	0/0:197:196,0:196:6807:0:0:0,-59.0019,-610.13	0/0:197:197,0:197:6909:0:0:0,-59.3029,-617.653	0/1:115:91,22:91:3186:22:771:-35.0449,0,-251.069	0/0:234:160,0:160:5627:0:0:0,-48.1648,-500.634	0/0:331:328,0:328:11376:0:0:0,-98.7378,-1017.45	0/0:294:293,0:293:10216:0:0:0,-88.2018,-913.947	0/1:235:156,77:156:5462:77:2687:-170.063,0,-418.859	0/0:264:257,0:257:8957:0:0:0,-77.3647,-801.366	0/1:12:10,2:10:352:2:68:-2.82831,0,-28.1843	0/0:313:310,0:310:10904:0:0:0,-93.3193,-962.689	0/0:122:121,0:121:4236:0:0:0,-36.4246,-379.62	0/0:27:25,0:25:876:0:0:0,-7.52575,-77.7318	0/0:261:260,0:260:9067:0:0:0,-78.2678,-809.424	0/1:107:72,32:72:2519:32:1122:-69.2564,0,-194.195	0/0:7:7,0:7:244:0:0:0,-2.10721,-22.1993	0/0:65:64,0:64:2215:0:0:0,-19.2659,-198.375	0/0:211:208,0:208:7278:0:0:0,-62.6142,-647.709	0/1:208:140,64:140:4930:64:2220:-137.468,0,-379.908	0/1:12:10,2:10:355:2:72:-3.19543,0,-28.4624	0/1:263:194,69:194:6757:69:2427:-138.253,0,-525.679	0/0:307:306,1:306:10668:1:36:0,-88.8332,-950.841	0/1:124:82,40:82:2885:40:1409:-88.719,0,-221.193	0/0:175:172,1:172:6007:1:36:0,-48.8472,-534.019	0/1:234:156,77:156:5430:77:2645:-166.307,0,-415.396	0/0:221:218,1:218:7641:1:36:0,-62.693,-678.338	0/1:75:56,19:56:1954:19:667:-37.5966,0,-151.556	0/0:171:169,0:169:5934:0:0:0,-50.8741,-527.05	0/0:256:255,0:255:8932:0:0:0,-76.7626,-801.523	0/1:45:31,13:31:1074:13:456:-27.6153,0,-82.8868	0/0:199:197,0:197:6893:0:0:0,-59.3029,-612.154	0/0:185:185,0:185:6506:0:0:0,-55.6905,-581.059	0/0:458:457,0:457:15913:0:0:0,-137.571,-1420.76	0/1:293:224,66:224:7816:66:2293:-118.009,0,-611.59	0/0:283:281,0:281:9774:0:0:0,-84.5894,-872.783	0/0:184:120,0:120:4232:0:0:0,-36.1236,-375.983	0/0:15:2,0:2:72:0:0:0,-0.60206,-6.41589	0/1:204:153,50:153:5410:50:1777:-98.0262,0,-422.044	0/0:299:297,0:297:10374:0:0:0,-89.4059,-922.358	0/0:372:368,0:368:12831:0:0:0,-110.779,-1149.96	0/1:188:127,61:127:4437:61:2123:-133.627,0,-340.051	0/0:195:194,0:194:6794:0:0:0,-58.3998,-608.833	0/0:232:232,0:232:8102:0:0:0,-69.839,-725.933	0/0:339:337,1:337:11760:1:32:0,-98.8932,-1050.14	0/0:112:111,0:111:3918:0:0:0,-33.4143,-348.102	0/0:118:75,0:75:2623:0:0:0,-22.5772,-230.798	0/0:123:79,0:79:2757:0:0:0,-23.7814,-245.975	0/0:147:145,0:145:5075:0:0:0,-43.6493,-452.871	0/1:165:99,60:99:3453:60:2094:-139.421,0,-260.678	0/1:112:56,55:56:1950:55:1943:-140.473,0,-139.104	0/0:246:243,0:243:8386:0:0:0,-73.1503,-747.821	0/0:292:290,0:290:10116:0:0:0,-87.2987,-904.928
chr11	26046343	.	G	T	20016	PASS	AB=0.516831;ABP=12.5126;AC=40;AF=0.212766;AN=188;AO=2007;CIGAR=1X;DP=8588;DPB=8588;DPRA=1.24897;EPP=4335.14;EPPR=13937.3;GTI=0;LEN=1;MEANALT=1.06122;MQM=28.6726;MQMR=33.5322;NS=94;NUMALT=1;ODDS=3.46681;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71929;QR=235234;RO=6576;RPL=3;RPP=4335.14;RPPR=13937.3;RPR=2004;RUN=1;SAF=2007;SAP=4361.16;SAR=0;SRF=6576;SRP=14282.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:22:22,0:22:773:0:0:0,-6.62266,-58.5134	0/1:91:46,45:46:1652:45:1611:-86.6864,0,-99.2294	0/0:112:111,0:111:3965:0:0:0,-33.4143,-299.676	0/1:134:65,69:65:2332:69:2461:-129.507,0,-149.154	0/0:22:22,0:22:792:0:0:0,-6.62266,-62.2367	0/0:20:20,0:20:705:0:0:0,-6.0206,-54.5669	0/0:66:66,0:66:2357:0:0:0,-19.868,-191.154	0/0:144:142,2:142:5092:2:72:0,-37.9883,-377.643	0/1:25:9,16:9:320:16:572:-33.3657,0,-16.4093	0/0:112:110,2:110:3914:2:72:0,-29.2261,-307.428	0/0:181:181,0:181:6485:0:0:0,-54.4864,-520.563	0/1:98:40,58:40:1427:58:2084:-118.851,0,-78.3011	0/1:86:54,32:54:1932:32:1148:-55.6105,0,-119.379	0/0:180:179,1:179:6413:1:36:0,-51.3643,-492.011	0/1:70:36,34:36:1284:34:1220:-62.8348,0,-80.9067	0/0:99:99,0:99:3531:0:0:0,-29.802,-272.166	0/1:98:51,47:51:1819:47:1688:-90.0988,0,-106.225	0/1:91:52,39:52:1855:39:1395:-71.9869,0,-111.076	0/1:107:47,60:47:1679:60:2160:-120.904,0,-95.613	0/1:115:47,68:47:1680:68:2425:-134.105,0,-101.158	0/0:92:92,0:92:3287:0:0:0,-27.6948,-255.524	0/1:62:17,45:17:608:45:1616:-92.3524,0,-30.3958	0/1:16:5,11:5:176:11:396:-22.6999,0,-9.91115	0/0:65:65,0:65:2336:0:0:0,-19.5669,-178.572	0/0:47:47,0:47:1684:0:0:0,-14.1484,-131.149	0/1:193:104,89:104:3736:89:3191:-161.7,0,-248.23	0/0:171:170,1:170:6076:1:36:0,-49.293,-466.656	0/0:38:37,1:37:1315:1:36:0,-8.3155,-99.1192	0/0:192:192,0:192:6888:0:0:0,-57.7978,-571.697	0/1:145:82,62:82:2944:62:2219:-113.754,0,-183.955	0/0:76:75,1:75:2673:1:36:0,-20.5047,-210.513	0/1:18:5,13:5:176:13:468:-27.8702,0,-8.78697	0/0:22:22,0:22:780:0:0:0,-6.62266,-61.5071	0/0:17:17,0:17:603:0:0:0,-5.11751,-45.5084	0/0:26:26,0:26:932:0:0:0,-7.82678,-71.6411	0/0:17:17,0:17:612:0:0:0,-5.11751,-47.0399	0/1:162:82,79:82:2935:79:2840:-146.452,0,-195.445	0/1:185:95,90:95:3390:90:3228:-172.261,0,-203.685	0/0:181:181,0:181:6495:0:0:0,-54.4864,-490.017	0/0:8:8,0:8:280:0:0:0,-2.40824,-20.9021	0/1:101:47,54:47:1680:54:1908:-106.003,0,-100.643	0/0:111:111,0:111:3963:0:0:0,-33.4143,-304.27	0/0:73:73,0:73:2602:0:0:0,-21.9752,-201.504	0/0:87:87,0:87:3124:0:0:0,-26.1896,-250.987	0/0:68:68,0:68:2424:0:0:0,-20.47,-195.17	0/1:49:28,21:28:973:21:756:-37.2374,0,-65.9681	0/1:100:47,53:47:1684:53:1904:-105.14,0,-97.2071	0/0:136:136,0:136:4860:0:0:0,-40.9401,-390.78	0/0:59:59,0:59:2101:0:0:0,-17.7608,-169.32	0/1:136:75,61:75:2696:61:2192:-109.763,0,-172.98	0/0:124:124,0:124:4417:0:0:0,-37.3277,-365.459	0/1:19:8,11:8:284:11:396:-21.5628,0,-17.7744	0/0:96:96,0:96:3431:0:0:0,-28.8989,-259.195	0/0:37:37,0:37:1328:0:0:0,-11.1381,-109.899	0/1:30:13,17:13:464:17:612:-34.9619,0,-26.411	0/0:86:86,0:86:3084:0:0:0,-25.8886,-235.234	0/1:23:14,9:14:500:9:320:-15.6709,0,-34.1486	0/0:21:21,0:21:756:0:0:0,-6.32163,-63.6143	0/0:12:12,0:12:428:0:0:0,-3.61236,-34.7106	0/0:56:56,0:56:1989:0:0:0,-16.8577,-156.037	0/1:193:101,92:101:3615:92:3308:-169.841,0,-238.057	0/1:7:2,5:2:72:5:180:-10.5574,0,-3.9441	0/1:83:36,47:36:1292:47:1675:-90.9679,0,-80.8895	0/0:183:182,1:182:6517:1:36:0,-52.715,-520.881	0/1:95:46,49:46:1652:49:1751:-95.7056,0,-99.1138	0/0:71:71,0:71:2532:0:0:0,-21.3731,-204.502	0/1:121:67,54:67:2399:54:1925:-96.8348,0,-157	0/0:86:85,1:85:3052:1:36:0,-23.515,-243.588	0/1:86:41,45:41:1468:45:1612:-88.8297,0,-87.606	0/0:65:65,0:65:2317:0:0:0,-19.5669,-172.904	0/0:114:114,0:114:4066:0:0:0,-34.3174,-337.099	0/1:31:17,14:17:597:14:496:-25.5686,0,-39.7571	0/0:111:111,0:111:3949:0:0:0,-33.4143,-297.701	0/0:57:57,0:57:2052:0:0:0,-17.1587,-153.985	0/0:59:59,0:59:2124:0:0:0,-17.7608,-164.295	0/1:125:47,78:47:1692:78:2800:-155.344,0,-99.0215	0/0:102:102,0:102:3668:0:0:0,-30.7051,-273.506	0/1:124:62,62:62:2228:62:2224:-120.269,0,-129.439	0/1:20:9,11:9:324:11:392:-21.8267,0,-18.0561	0/1:92:47,45:47:1688:45:1612:-86.6655,0,-104.645	0/0:86:86,0:86:3065:0:0:0,-25.8886,-232.946	0/0:156:156,0:156:5585:0:0:0,-46.9607,-444.29	0/1:125:60,64:60:2144:64:2292:-122.19,0,-135.609	0/0:132:132,0:132:4717:0:0:0,-39.736,-377.372	0/0:74:74,0:74:2660:0:0:0,-22.2762,-211.238	0/0:142:141,0:141:5055:0:0:0,-42.4452,-405.283	0/0:41:41,0:41:1472:0:0:0,-12.3422,-111.381	0/1:91:42,49:42:1473:49:1760:-97.3576,0,-86.2134	0/1:95:48,47:48:1724:47:1680:-91.6291,0,-102.426	0/0:211:211,0:211:7564:0:0:0,-63.5173,-586.794	0/1:325:141,184:141:5051:184:6612:-371.102,0,-296.604	0/1:95:28,67:28:1000:67:2404:-137.191,0,-53.1756	0/0:63:63,0:63:2260:0:0:0,-18.9649,-187.144	0/0:97:96,1:96:3439:1:36:0,-26.4637,-274.149
chr11	26046348	.	GACAT	CACAC,CACAT	143496	PASS	AB=0.486842,0.510062;ABP=8.83899,6.41877;AC=148,40;AF=0.787234,0.212766;AN=188;AO=6669,1985;CIGAR=1X3M1X,1X4M;DP=8691;DPB=8691;DPRA=0,1.21527;EPP=14027.9,4287.36;EPPR=5.18177;GTI=0;LEN=5,1;MEANALT=1.85106,2.32609;MQM=33.5179,28.7234;MQMR=60;NS=94;NUMALT=2;ODDS=3.87333;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=233732,56820;QR=36;RO=1;RPL=53,3;RPP=14027.9,4287.36;RPPR=5.18177;RPR=6616,1982;RUN=1,1;SAF=6669,1985;SAP=14484.6,4313.38;SAR=0,0;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:22:0,22,0:0:0:22,0:770,0:-58.8401,-6.62266,0,-58.8401,-6.62266,-58.8401	1/2:93:0,48,44:0:0:48,44:1646,1273:-203.889,-89.5042,-75.0548,-114.412,0,-101.167	1/1:115:0,114,0:0:0:114,0:3977,0:-302.312,-34.3174,0,-302.312,-34.3174,-302.312	1/2:132:0,65,67:0:0:65,67:2319,1881:-300.267,-131.24,-111.673,-169.314,0,-149.145	1/1:22:0,22,0:0:0:22,0:791,0:-62.2041,-6.62266,0,-62.2041,-6.62266,-62.2041	1/1:20:0,20,0:0:0:20,0:698,0:-54.492,-6.0206,0,-54.492,-6.0206,-54.492	1/1:68:0,68,0:0:0:68,0:2394,0:-195.231,-20.47,0,-195.231,-20.47,-195.231	1/1:147:0,142,2:0:0:142,2:4986,58:-380.812,-42.7463,0,-376.736,-38.6484,-376.134	1/2:24:0,9,15:0:0:9,15:305,435:-51.3228,-30.8343,-28.125,-20.7649,0,-16.2495	1/1:113:0,111,2:0:0:111,2:3904,48:-312.686,-33.4143,0,-309.51,-30.026,-308.908	1/1:185:0,185,0:0:0:185,0:6493,0:-525.026,-55.6906,0,-525.026,-55.6906,-525.026	1/2:99:0,42,57:0:0:42,57:1489,1670:-218.091,-118.459,-105.815,-99.915,0,-82.7563	1/2:89:0,54,34:0:0:54,34:1889,984:-197.134,-69.2872,-53.0316,-127.913,0,-117.678	1/1:185:0,184,1:0:0:184,1:6451,29:-502.394,-55.3895,0,-500.356,-53.0913,-500.055	1/2:71:0,38,33:0:0:38,33:1327,928:-158.788,-64.9065,-53.4674,-94.1591,0,-84.2252	1/1:100:0,98,0:0:0:98,0:3443,0:-268.322,-29.5009,0,-268.322,-29.5009,-268.322	1/2:98:0,49,48:0:0:49,48:1712,1398:-213.511,-98.7335,-83.983,-114.854,0,-100.405	1/2:91:0,52,37:0:0:52,37:1829,1074:-198.347,-75.5658,-59.9123,-122.853,0,-111.715	1/2:105:0,46,58:0:0:46,58:1594,1689:-228.979,-118.914,-105.066,-110.148,0,-92.6885	1/2:118:0,50,67:0:0:50,67:1725,1895:-257.705,-132.273,-117.222,-125.489,0,-105.32	1/1:98:0,98,0:0:0:98,0:3404,0:-266.182,-29.5009,0,-266.182,-29.5009,-266.182	1/2:63:0,17,46:0:0:17,46:593,1288:-132.531,-89.8742,-84.7567,-42.9524,0,-29.105	1/2:14:0,5,9:0:0:5,9:179,254:-31.0529,-17.9672,-16.4621,-13.3838,0,-10.6746	1/1:66:0,66,0:0:0:66,0:2323,0:-179.61,-19.868,0,-179.61,-19.868,-179.61	1/1:48:0,47,0:0:0:47,0:1681,0:-130.867,-14.1484,0,-130.867,-14.1484,-130.867	1/2:194:0,106,88:0:0:106,88:3709,2466:-445.438,-172.068,-140.158,-273.652,0,-247.162	1/1:172:0,171,0:0:0:171,0:6040,0:-467.778,-51.4761,0,-467.778,-51.4761,-467.778	1/1:40:0,38,1:0:0:38,1:1323,33:-104.459,-11.4391,0,-102.061,-9.0002,-101.76	1/1:196:0,194,0:0:0:194,0:6880,0:-573.439,-58.3998,0,-573.439,-58.3998,-573.439	1/2:144:0,84,60:0:0:84,60:2898,1741:-325.435,-122.647,-97.3609,-203.065,0,-185.003	1/1:76:0,75,0:0:0:75,0:2630,0:-210.386,-22.5773,0,-210.386,-22.5773,-210.386	1/2:17:0,5,12:0:0:5,12:162,348:-36.3805,-24.7194,-23.2142,-11.944,0,-8.3316	1/1:22:0,22,0:0:0:22,0:765,0:-60.5638,-6.62266,0,-60.5638,-6.62266,-60.5638	1/1:17:0,17,0:0:0:17,0:579,0:-44.6467,-5.11751,0,-44.6467,-5.11751,-44.6467	1/1:28:0,28,0:0:0:28,0:939,0:-74.2699,-8.42884,0,-74.2699,-8.42884,-74.2699	1/1:19:0,18,0:0:0:18,0:607,0:-47.1976,-5.41854,0,-47.1976,-5.41854,-47.1976	1/2:164:0,83,81:0:0:83,81:2908,2278:-376.869,-159.01,-134.024,-218.147,0,-193.763	1/2:189:0,98,91:0:0:98,91:3378,2632:-417.919,-185.114,-155.614,-233.082,0,-205.688	1/1:184:0,184,0:0:0:184,0:6421,0:-491.362,-55.3895,0,-491.362,-55.3895,-491.362	1/1:8:0,7,0:0:0:7,0:229,0:-18.0323,-2.10721,0,-18.0323,-2.10721,-18.0323	1/2:101:0,47,54:0:0:47,54:1634,1569:-224.799,-110.598,-96.4495,-114.484,0,-98.2284	1/1:112:0,111,0:0:0:111,0:3882,0:-301.48,-33.4143,0,-301.48,-33.4143,-301.48	1/1:78:0,78,0:0:0:78,0:2720,0:-213.636,-23.4803,0,-213.636,-23.4803,-213.636	1/1:87:0,87,0:0:0:87,0:3072,0:-248.515,-26.1896,0,-248.515,-26.1896,-248.515	1/1:71:0,71,0:0:0:71,0:2483,0:-201.252,-21.3731,0,-201.252,-21.3731,-201.252	1/2:47:0,28,19:0:0:28,19:989,532:-110.535,-37.2686,-28.8398,-73.5464,0,-67.8269	1/2:103:0,47,54:0:0:47,54:1647,1571:-222.974,-110.69,-96.5411,-112.362,0,-96.1067	1/1:137:0,137,0:0:0:137,0:4772,0:-387.722,-41.2411,0,-387.722,-41.2411,-387.722	1/1:62:0,62,0:0:0:62,0:2183,0:-177.183,-18.6639,0,-177.183,-18.6639,-177.183	1/2:137:0,77,60:0:0:77,60:2746,1682:-311.482,-117.531,-94.3519,-194.229,0,-176.167	1/1:125:0,124,0:0:0:124,0:4348,0:-362.253,-37.3277,0,-362.253,-37.3277,-362.253	1/2:19:0,8,11:0:0:8,11:278,307:-41.9921,-21.591,-19.1827,-20.6892,0,-17.3778	1/1:96:0,95,0:0:0:95,0:3354,0:-255.868,-28.5979,0,-255.868,-28.5979,-255.868	1/1:38:0,38,0:0:0:38,0:1338,0:-111.362,-11.4391,0,-111.362,-11.4391,-111.362	1/2:29:0,13,16:0:0:13,16:436,472:-63.8874,-33.5973,-29.6839,-30.5702,0,-25.7537	1/1:87:0,87,0:0:0:87,0:3058,0:-236.44,-26.1896,0,-236.44,-26.1896,-236.44	1/2:23:0,15,8:0:0:15,8:523,226:-54.2008,-16.0191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chr11	26046386	.	T	C	19545.6	PASS	AB=0.517331;ABP=13.021;AC=40;AF=0.212766;AN=188;AO=1993;CIGAR=1X;DP=8483;DPB=8483;DPRA=1.18568;EPP=4330.75;EPPR=14093.7;GTI=0;LEN=1;MEANALT=1.02222;MQM=28.6192;MQMR=33.4124;NS=94;NUMALT=1;ODDS=3.14859;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70849;QR=231148;RO=6489;RPL=1993;RPP=4330.75;RPPR=14085;RPR=0;RUN=1;SAF=1993;SAP=4330.75;SAR=0;SRF=6488;SRP=14085;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:20:20,0:20:712:0:0:0,-6.0206,-54.0418	0/1:93:49,44:49:1760:44:1568:-83.405,0,-106.875	0/0:108:108,0:108:3868:0:0:0,-32.5112,-291.011	0/1:134:65,69:65:2328:69:2448:-129.637,0,-148.954	0/0:22:22,0:22:773:0:0:0,-6.62266,-61.1264	0/0:20:20,0:20:716:0:0:0,-6.0206,-55.2592	0/0:66:66,0:66:2346:0:0:0,-19.868,-191.049	0/0:139:136,3:136:4868:3:108:0,-33.9441,-359.969	0/1:24:9,15:9:324:15:532:-30.9655,0,-16.852	0/0:110:108,2:108:3832:2:72:0,-28.624,-301.791	0/0:176:176,0:176:6248:0:0:0,-52.9813,-503.039	0/1:97:40,57:40:1428:57:2036:-115.649,0,-79.16	0/1:86:53,33:53:1900:33:1184:-58.0917,0,-117.044	0/0:178:177,1:177:6306:1:27:0,-51.0954,-485.339	0/1:69:35,34:35:1244:34:1220:-63.4633,0,-78.5151	0/0:96:96,0:96:3423:0:0:0,-28.8989,-264.644	0/1:98:51,47:51:1816:47:1664:-89.556,0,-105.407	0/1:90:52,38:52:1852:38:1356:-69.953,0,-110.787	0/1:101:44,57:44:1584:57:2036:-114.521,0,-89.4371	0/1:117:51,66:51:1808:66:2319:-126.702,0,-110.82	0/0:94:94,0:94:3351:0:0:0,-28.2968,-260.545	0/1:64:18,46:18:644:46:1628:-93.3068,0,-32.7156	0/1:16:5,11:5:171:11:392:-22.6114,0,-9.55471	0/0:64:63,1:63:2238:1:36:0,-16.4448,-169.869	0/0:47:47,0:47:1679:0:0:0,-14.1484,-130.839	0/1:193:104,89:104:3690:89:3179:-161.184,0,-244.791	0/0:170:170,0:170:6088:0:0:0,-51.1751,-468.662	0/0:38:38,0:38:1360:0:0:0,-11.4391,-105.524	0/0:192:192,0:192:6844:0:0:0,-57.7978,-568.757	0/1:143:81,62:81:2880:62:2210:-113.963,0,-182.22	0/0:74:74,0:74:2656:0:0:0,-22.2762,-210.386	0/1:18:5,13:5:176:13:464:-27.7819,0,-8.78697	0/0:22:22,0:22:780:0:0:0,-6.62266,-61.5071	0/0:16:16,0:16:576:0:0:0,-4.81648,-43.3255	0/0:28:28,0:28:1004:0:0:0,-8.42884,-77.1394	0/0:19:19,0:19:684:0:0:0,-5.71957,-51.5738	0/1:160:81,79:81:2891:79:2824:-146.582,0,-192.427	0/1:184:92,92:92:3274:92:3247:-175.894,0,-196.566	0/0:177:177,0:177:6335:0:0:0,-53.2823,-479.529	0/0:8:8,0:8:284:0:0:0,-2.40824,-20.9243	0/1:100:46,54:46:1634:54:1892:-105.869,0,-97.4551	0/0:107:107,0:107:3791:0:0:0,-32.2102,-292.331	0/0:75:75,0:75:2676:0:0:0,-22.5772,-208.238	0/0:85:85,0:85:3026:0:0:0,-25.5875,-244.902	0/0:66:66,0:66:2323:0:0:0,-19.868,-188.079	0/1:49:28,21:28:986:21:752:-37.1636,0,-66.8082	0/1:102:48,54:48:1712:54:1932:-106.849,0,-98.239	0/0:137:137,0:137:4874:0:0:0,-41.2411,-392.127	0/0:60:60,0:60:2140:0:0:0,-18.0618,-173.446	0/1:136:76,60:76:2720:60:2140:-107.381,0,-174.163	0/0:122:122,0:122:4316:0:0:0,-36.7257,-358.356	0/1:19:8,11:8:273:11:392:-21.4887,0,-16.9162	0/0:93:93,0:93:3340:0:0:0,-27.9958,-251.938	0/0:38:38,0:38:1364:0:0:0,-11.4391,-112.911	0/1:29:12,17:12:432:17:600:-34.9984,0,-24.2049	0/0:85:85,0:85:3017:0:0:0,-25.5875,-231.392	0/1:23:14,9:14:496:9:309:-15.0304,0,-33.9468	0/0:22:22,0:22:792:0:0:0,-6.62266,-66.6258	0/0:12:12,0:12:417:0:0:0,-3.61236,-33.81	0/0:55:55,0:55:1944:0:0:0,-16.5566,-152.974	0/1:193:99,94:99:3540:94:3308:-172.908,0,-230.783	0/1:7:2,5:2:72:5:180:-10.5574,0,-3.9441	0/1:80:35,45:35:1236:45:1608:-86.8633,0,-77.8139	0/0:177:177,0:177:6306:0:0:0,-53.2823,-507.339	0/1:95:47,48:47:1665:48:1720:-93.3794,0,-100.658	0/0:70:70,0:70:2468:0:0:0,-21.0721,-200.008	0/1:120:66,54:66:2356:54:1923:-97.3417,0,-154.168	0/0:88:88,0:88:3123:0:0:0,-26.4906,-251.541	0/1:87:42,45:42:1486:45:1592:-88.0159,0,-89.3146	0/0:62:62,0:62:2228:0:0:0,-18.6639,-166.357	0/0:113:113,0:113:4023:0:0:0,-34.0164,-334.181	0/1:30:17,13:17:604:13:464:-23.5339,0,-40.7085	0/0:108:108,0:108:3868:0:0:0,-32.5112,-289.876	0/0:60:60,0:60:2140:0:0:0,-18.0618,-161.668	0/0:61:61,0:61:2172:0:0:0,-18.3628,-168.977	0/1:123:47,76:47:1684:76:2692:-150.317,0,-99.2221	0/0:99:99,0:99:3544:0:0:0,-29.802,-265.234	0/1:123:62,61:62:2220:61:2180:-117.782,0,-129.586	0/1:20:9,11:9:324:11:392:-21.7797,0,-18.0561	0/1:92:47,45:47:1661:45:1603:-86.3649,0,-103.218	0/0:84:84,0:84:3020:0:0:0,-25.2865,-229.341	0/0:154:154,0:154:5489:0:0:0,-46.3586,-438.539	0/1:120:56,64:56:1995:64:2288:-122.056,0,-124.269	0/0:129:129,0:129:4559:0:0:0,-38.8329,-367.312	0/0:75:75,0:75:2674:0:0:0,-22.5772,-213.59	0/0:138:138,0:138:4875:0:0:0,-41.5421,-393.035	0/0:39:39,0:39:1396:0:0:0,-11.7402,-105.489	0/1:90:41,49:41:1464:49:1744:-97.2338,0,-84.6693	0/1:94:47,46:47:1676:46:1636:-89.1768,0,-99.7123	0/0:211:211,0:211:7510:0:0:0,-63.5173,-583.427	0/1:320:138,182:138:4921:182:6453:-364.847,0,-288.15	0/1:98:29,69:29:1012:69:2463:-140.879,0,-53.5924	0/0:43:43,0:43:1528:0:0:0,-12.9443,-121.905	0/0:94:93,1:93:3295:1:36:0,-25.5606,-263.14
chr11	26619181	.	C	G	181812	PASS	AB=0.581122;ABP=246.456;AC=142;AF=0.755319;AN=188;AO=8498;CIGAR=1X;DP=10289;DPB=10289;DPRA=0;EPP=18456.2;EPPR=3870.4;GTI=2;LEN=1;MEANALT=1.10638;MQM=58.3586;MQMR=59.927;NS=94;NUMALT=1;ODDS=0.974743;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=303166;QR=63632;RO=1781;RPL=8498;RPP=18456.2;RPPR=3870.4;RPR=0;RUN=1;SAF=0;SAP=18456.2;SAR=8498;SRF=0;SRP=3870.4;SRR=1781;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:20:0,20:0:0:20:720:-64.9725,-6.0206,0	0/1:22:14,8:14:504:8:288:-19.6374,0,-39.0754	0/1:64:32,31:32:1144:31:1112:-80.9716,0,-83.9441	0/1:90:39,50:39:1384:50:1788:-134.022,0,-97.7008	0/1:26:12,14:12:432:14:500:-37.5048,0,-31.3944	0/1:27:6,21:6:216:21:756:-60.0736,0,-11.6627	1/1:46:0,46:0:0:46:1625:-146.461,-13.8474,0	1/1:76:0,76:0:0:76:2690:-241.654,-22.8783,0	0/1:61:37,24:37:1320:24:851:-58.4523,0,-100.738	1/1:39:0,39:0:0:39:1392:-125.576,-11.7402,0	1/1:159:0,159:0:0:159:5641:-507.723,-47.8638,0	0/1:40:15,25:15:540:25:874:-66.9045,0,-36.8944	0/1:28:17,11:17:608:11:396:-27.5387,0,-46.6232	1/1:21:0,21:0:0:21:756:-68.3672,-6.32163,0	0/1:25:12,13:12:423:13:460:-34.2092,0,-30.8793	1/1:29:0,29:0:0:29:1014:-91.5349,-8.72987,0	0/1:21:12,9:12:424:9:311:-21.9925,0,-32.1748	0/1:15:4,11:4:135:11:396:-31.3879,0,-7.96706	1/1:51:0,50:0:0:50:1776:-159.605,-15.0515,0	0/1:54:17,37:17:608:37:1324:-103.178,0,-38.7964	1/1:56:0,56:0:0:56:1977:-178.099,-16.8577,0	0/1:76:30,46:30:1053:46:1644:-125.356,0,-72.2003	0/1:81:25,56:25:866:56:1996:-155.445,0,-53.8679	1/1:19:0,19:0:0:19:680:-61.5058,-5.71957,0	1/1:41:0,41:0:0:41:1472:-132.721,-12.3422,0	0/1:138:70,68:70:2516:68:2424:-176.559,0,-185.149	1/1:97:0,97:0:0:97:3449:-309.796,-29.1999,0	1/1:8:0,8:0:0:8:288:-26.2658,-2.40824,0	1/1:167:0,167:0:0:167:5967:-536.478,-50.272,0	0/1:100:38,62:38:1352:62:2204:-168.294,0,-91.8774	1/1:63:0,63:0:0:63:2244:-202.155,-18.9649,0	0/1:382:146,235:146:5213:235:8404:-639.725,0,-354.211	1/1:382:1,381:1:36:381:13606:-1219.97,-111.395,0	1/1:569:1,568:1:36:568:20272:-1817.13,-167.688,0	1/1:1176:0,1175:0:0:1175:41959:-3769.09,-353.71,0	1/1:490:0,489:0:0:489:17445:-1566.61,-147.204,0	0/1:89:42,47:42:1504:47:1658:-122.695,0,-108.863	0/1:67:38,29:38:1345:29:1032:-72.9145,0,-101.179	1/1:81:0,81:0:0:81:2878:-258.416,-24.3834,0	1/1:303:0,302:0:0:302:10781:-968.467,-90.9111,0	0/1:55:24,31:24:856:31:1116:-84.1477,0,-60.8045	1/1:61:0,61:0:0:61:2180:-196.056,-18.3628,0	1/1:85:0,85:0:0:85:3024:-271.825,-25.5876,0	1/1:11:0,11:0:0:11:384:-34.8947,-3.31133,0	1/1:13:0,13:0:0:13:468:-42.4311,-3.91339,0	0/1:43:11,32:11:392:32:1136:-89.6046,0,-22.6758	0/1:52:13,38:13:460:38:1360:-106.817,0,-26.0226	1/1:85:0,85:0:0:85:3044:-273.661,-25.5876,0	1/1:49:0,49:0:0:49:1744:-157.215,-14.7505,0	0/1:44:25,19:25:900:19:684:-48.6027,0,-68.0757	1/1:44:0,44:0:0:44:1576:-142.104,-13.2453,0	0/1:331:163,168:163:5832:168:6004:-440.623,0,-425.324	1/1:69:0,69:0:0:69:2468:-222.078,-20.7711,0	1/1:51:0,51:0:0:51:1801:-162.356,-15.3525,0	0/1:238:82,155:82:2933:155:5523:-425.078,0,-192.494	1/1:65:0,65:0:0:65:2320:-208.832,-19.567,0	0/1:30:12,18:12:428:18:640:-48.8445,0,-29.8279	1/1:464:0,464:0:0:464:16573:-1490.95,-139.678,0	1/1:280:0,280:0:0:280:10012:-900.443,-84.2884,0	0/1:34:8,26:8:284:26:916:-72.4219,0,-15.6683	0/1:31:10,21:10:356:21:756:-58.5684,0,-23.0493	0/1:203:90,113:90:3232:113:4032:-301.441,0,-229.992	0/1:32:10,22:10:356:22:788:-61.6118,0,-22.7483	1/1:102:0,102:0:0:102:3648:-328.373,-30.7051,0	0/1:30:10,20:10:356:20:716:-55.7359,0,-23.3503	0/1:50:18,32:18:648:32:1140:-87.8577,0,-43.6004	1/1:112:0,111:0:0:111:3980:-357.841,-33.4143,0	1/1:89:0,89:0:0:89:3188:-287.002,-26.7917,0	0/1:127:80,47:80:2849:47:1673:-112.419,0,-218.416	1/1:27:0,27:0:0:27:964:-86.6818,-8.12781,0	1/1:16:0,16:0:0:16:563:-50.9992,-4.81648,0	0/1:342:120,222:120:4296:222:7912:-608.769,0,-283.865	1/1:92:0,92:0:0:92:3259:-292.779,-27.6948,0	0/1:28:11,17:11:392:17:596:-45.5256,0,-27.1903	1/1:126:0,126:0:0:126:4519:-406.299,-37.9298,0	0/1:72:31,41:31:1108:41:1464:-110.325,0,-78.3487	0/1:48:21,27:21:752:27:956:-71.7091,0,-53.5475	0/1:34:15,19:15:536:19:684:-51.4397,0,-38.3389	0/1:502:149,353:149:5348:353:12575:-978.523,0,-330.225	0/1:35:16,19:16:572:19:680:-50.9869,0,-41.2774	1/1:67:0,67:0:0:67:2404:-216.389,-20.169,0	1/1:105:0,105:0:0:105:3760:-338.243,-31.6082,0	0/1:18:12,6:12:432:6:208:-13.6405,0,-33.8027	1/1:26:0,26:0:0:26:928:-83.7676,-7.82678,0	1/1:18:0,18:0:0:18:640:-57.9008,-5.41854,0	1/1:32:0,32:0:0:32:1139:-102.79,-9.63296,0	1/1:6:0,6:0:0:6:212:-19.4124,-1.80618,0	0/1:20:12,8:12:424:8:288:-20.2343,0,-32.4735	0/1:22:11,11:11:396:11:396:-29.2114,0,-29.3601	0/1:94:59,35:59:2116:35:1252:-84.6651,0,-162.412	0/1:310:143,167:143:5124:167:5957:-442.664,0,-367.937	0/1:28:17,11:17:595:11:388:-26.8285,0,-45.4478	1/1:10:0,10:0:0:10:356:-32.3696,-3.0103,0	1/1:32:0,32:0:0:32:1122:-101.206,-9.63296,0
chr11	26653378	.	AGA	GGG,AGG	273664	PASS	AB=0.589777,0.406572;ABP=328.962,356.014;AC=148,40;AF=0.787234,0.212766;AN=188;AO=15215,1965;CIGAR=1X1M1X,2M1X;DP=17233;DPB=18754.3;DPRA=0,0.946925;EPP=31099.7,3715.94;EPPR=0;GTI=2;LEN=3,1;MEANALT=2.01064,2.42857;MQM=28.1291,47.8738;MQMR=0;NS=94;NUMALT=2;ODDS=21.7932;PAIRED=0,0;PAIREDR=0;PAO=4564,0;PQA=104516,0;PQR=0;PRO=0;QA=533234,70297;QR=0;RO=0;RPL=227,1900;RPP=31099.7,3724.05;RPPR=0;RPR=14988,65;RUN=1,1;SAF=0,1;SAP=33042,4261.27;SAR=15215,1964;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:16:0,16,0:0:0:16,0:572,0:-39.6144,-4.81648,0,-39.6144,-4.81648,-39.6144	1/2:180:0,99,81:0:0:99,81:3401,2904:-444.299,-235.023,-205.221,-209.592,0,-185.209	1/2:120:0,76,44:0:0:76,44:2668,1584:-291.405,-128.539,-105.661,-163.192,0,-149.947	1/2:153:0,78,75:0:0:78,75:2743,2680:-383.761,-216.417,-192.936,-167.376,0,-144.798	1/2:87:0,42,44:0:0:42,44:1480,1571:-217.086,-127.223,-114.58,-89.8841,0,-76.6388	1/2:50:0,21,29:0:0:21,29:749,1040:-129.632,-84.4049,-78.0832,-45.5343,0,-36.8044	1/1:79:0,79,0:0:0:79,0:2776,0:-192.56,-23.7814,0,-192.56,-23.7814,-192.56	1/1:175:0,174,1:0:0:174,1:6099,36:-426.083,-52.3792,0,-423.163,-49.1015,-422.862	1/2:86:0,56,29:0:0:56,29:1969,1036:-203.665,-83.6566,-66.7989,-120.085,0,-111.355	1/1:105:0,105,0:0:0:105,0:3681,0:-257.283,-31.6082,0,-257.283,-31.6082,-257.283	1/1:436:0,435,0:0:0:435,0:15261,0:-1064.13,-130.948,0,-1064.13,-130.948,-1064.13	1/2:69:0,25,43:0:0:25,43:859,1536:-176.83,-123.829,-116.303,-53.028,0,-40.0837	1/2:68:0,31,37:0:0:31,37:1093,1328:-174.326,-107.821,-98.4886,-66.8155,0,-55.6773	1/1:66:0,66,0:0:0:66,0:2296,0:-160.299,-19.868,0,-160.299,-19.868,-160.299	1/2:75:0,31,43:0:0:31,43:1086,1540:-190.622,-124.171,-114.84,-66.493,0,-53.5487	1/1:48:0,47,1:0:0:47,1:1654,36:-115.674,-14.1484,0,-112.758,-11.2301,-112.457	1/2:78:0,34,44:0:0:34,44:1204,1572:-201.025,-127.834,-117.599,-73.4991,0,-60.2538	1/2:57:0,31,26:0:0:31,26:1108,936:-143.134,-76.2919,-66.9599,-67.1611,0,-59.3343	1/1:288:0,286,0:0:0:286,0:10121,0:-703.101,-86.0946,0,-703.101,-86.0946,-703.101	1/2:62:0,35,27:0:0:35,27:1245,968:-153.34,-77.939,-67.403,-75.414,0,-67.2861	1/1:139:0,139,0:0:0:139,0:4845,0:-338.106,-41.8432,0,-338.106,-41.8432,-338.106	1/2:27:0,5,22:0:0:5,22:164,792:-74.5119,-64.3854,-62.8802,-10.4036,0,-3.78092	1/2:37:0,13,24:0:0:13,24:450,848:-95.6832,-68.323,-64.4096,-27.3683,0,-20.1436	1/1:92:0,92,0:0:0:92,0:3244,0:-225.337,-27.6948,0,-225.337,-27.6948,-225.337	1/1:39:0,39,0:0:0:39,0:1365,0:-95.2341,-11.7402,0,-95.2341,-11.7402,-95.2341	1/2:233:0,111,122:0:0:111,122:3850,4364:-587.681,-351.559,-318.145,-236.303,0,-199.577	1/1:198:0,198,0:0:0:198,0:6925,0:-483.351,-59.6039,0,-483.351,-59.6039,-483.351	1/1:28:0,28,0:0:0:28,0:990,0:-68.2206,-8.42884,0,-68.2206,-8.42884,-68.2206	1/1:144:0,143,0:0:0:143,0:5030,0:-349.483,-43.0473,0,-349.483,-43.0473,-349.483	1/2:136:0,73,62:0:0:73,62:2567,2203:-334.6,-177.948,-155.973,-156.694,0,-138.03	1/1:81:0,80,1:0:0:80,1:2843,36:-196.562,-24.0824,0,-193.624,-21.1435,-193.322	1/1:367:0,366,1:0:0:366,1:12877,36:-896.759,-110.177,0,-893.831,-107.228,-893.53	1/1:652:0,648,1:0:0:648,1:22759,36:-1585.01,-195.067,0,-1582.1,-192.14,-1581.8	1/1:1250:0,1245,0:0:0:1245,0:43491,0:-3039.48,-374.782,0,-3039.48,-374.782,-3039.48	1/1:1320:0,1309,3:0:0:1309,3:45853,108:-3201.19,-394.048,0,-3192.48,-385.316,-3191.58	1/1:713:0,711,0:0:0:711,0:24895,0:-1735.51,-214.032,0,-1735.51,-214.032,-1735.51	1/2:209:0,92,117:0:0:92,117:3249,4180:-535.112,-336.744,-309.05,-198.543,0,-163.323	1/2:99:0,51,48:0:0:51,48:1791,1703:-247.519,-137.832,-122.479,-109.715,0,-95.266	1/1:481:0,479,0:0:0:479,0:16771,0:-1167.38,-144.193,0,-1167.38,-144.193,-1167.38	1/1:519:0,519,0:0:0:519,0:18060,0:-1264.94,-156.235,0,-1264.94,-156.235,-1264.94	1/2:145:0,78,65:0:0:78,65:2741,2328:-355.169,-187.509,-164.029,-167.689,0,-148.122	1/1:189:0,188,1:0:0:188,1:6619,36:-459.377,-56.5936,0,-456.509,-53.7211,-456.208	1/1:102:0,102,0:0:0:102,0:3555,0:-248.346,-30.7051,0,-248.346,-30.7051,-248.346	1/1:71:0,71,0:0:0:71,0:2456,0:-172.179,-21.3731,0,-172.179,-21.3731,-172.179	1/1:67:0,67,0:0:0:67,0:2357,0:-163.781,-20.169,0,-163.781,-20.169,-163.781	1/2:101:0,58,43:0:0:58,43:2019,1532:-246.921,-123.604,-106.145,-123.634,0,-110.689	1/2:66:0,39,27:0:0:39,27:1353,963:-161.186,-78.4366,-66.6965,-83.0695,0,-74.9417	1/1:147:0,146,0:0:0:146,0:5133,0:-356.957,-43.9504,0,-356.957,-43.9504,-356.957	1/1:44:0,44,0:0:0:44,0:1542,0:-108.787,-13.2453,0,-108.787,-13.2453,-108.787	1/2:127:0,77,50:0:0:77,50:2692,1800:-309.867,-145.291,-122.112,-164.652,0,-149.6	1/1:91:0,91,0:0:0:91,0:3202,0:-222.562,-27.3937,0,-222.562,-27.3937,-222.562	1/2:532:0,418,110:0:0:418,110:14727,3926:-1212.92,-316.539,-190.709,-896.525,0,-863.412	1/1:126:0,125,1:0:0:125,1:4415,36:-307.302,-37.6288,0,-304.381,-34.351,-304.08	1/1:28:0,28,0:0:0:28,0:992,0:-68.8204,-8.42884,0,-68.8204,-8.42884,-68.8204	1/1:331:0,318,12:0:0:318,12:11104,428:-775.501,-95.7275,0,-741.108,-61.2649,-737.496	1/1:93:0,93,0:0:0:93,0:3294,0:-228.986,-27.9958,0,-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chr11	26653387	.	C	T	216589	PASS	AB=0.601313;ABP=437.725;AC=147;AF=0.781915;AN=188;AO=15162;CIGAR=1X;DP=17170;DPB=17170;DPRA=0;EPP=32926.9;EPPR=4341.63;GTI=3;LEN=1;MEANALT=1.02128;MQM=28.1257;MQMR=47.819;NS=94;NUMALT=1;ODDS=13.4899;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=539666;QR=71731;RO=2006;RPL=15162;RPP=32926.9;RPPR=4341.63;RPR=0;RUN=1;SAF=0;SAP=32926.9;SAR=15162;SRF=0;SRP=4358.98;SRR=2006;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:16:0,16:0:0:16:557:-38.9534,-4.81648,0	0/1:180:83,97:83:2969:97:3465:-184.31,0,-211.046	0/1:121:45,76:45:1612:76:2713:-150.367,0,-107.88	0/1:155:77,78:77:2753:78:2759:-143.78,0,-199.118	0/1:86:45,41:45:1616:41:1472:-75.2773,0,-118.593	0/1:50:29,21:29:1021:21:726:-35.6432,0,-76.3796	1/1:79:0,79:0:0:79:2821:-193.784,-23.7814,0	1/1:175:2,173:2:68:173:6205:-420.912,-46.2719,0	0/1:86:31,55:31:1112:55:1942:-108.391,0,-73.4159	1/1:104:0,104:0:0:104:3661:-253.909,-31.3071,0	1/1:433:2,431:2:72:431:15327:-1050.14,-124.402,0	0/1:71:46,25:46:1656:25:900:-40.465,0,-126.085	0/1:66:35,31:35:1256:31:1101:-56.1002,0,-92.6344	1/1:66:0,66:0:0:66:2372:-162.881,-19.868,0	0/1:73:44,29:44:1569:29:1029:-49.0677,0,-117.975	1/1:47:2,45:2:72:45:1616:-104.277,-7.40869,0	0/1:78:44,34:44:1580:34:1209:-60.0262,0,-118.311	0/1:58:27,31:27:972:31:1108:-59.0066,0,-69.8893	1/1:282:1,281:1:36:281:9963:-685.454,-81.3695,0	0/1:61:26,35:26:936:35:1260:-68.1778,0,-65.143	1/1:139:0,139:0:0:139:4947:-340.648,-41.8432,0	0/1:27:22,5:22:792:5:172:-4.8025,0,-62.8802	0/1:38:25,13:25:877:13:468:-20.848,0,-66.9825	1/1:91:0,91:0:0:91:3253:-223.728,-27.3937,0	1/1:39:0,39:0:0:39:1400:-96.2407,-11.7402,0	0/1:235:124,111:124:4433:111:3934:-200.768,0,-323.821	1/1:196:0,196:0:0:196:7002:-482.502,-59.0019,0	1/1:28:0,28:0:0:28:989:-68.17,-8.42884,0	1/1:143:0,143:0:0:143:5042:-348.946,-43.0473,0	0/1:139:65,74:65:2313:74:2611:-138.721,0,-165.027	1/1:81:1,80:1:36:80:2850:-192.47,-20.7852,0	1/1:367:3,364:3:108:364:12937:-881.174,-100.558,0	1/1:648:1,647:1:36:647:22899:-1576.17,-191.494,0	1/1:1246:0,1245:0:0:1245:44413:-3056.74,-374.782,0	1/1:1317:3,1314:3:108:1314:46664:-3212.56,-386.49,0	1/1:711:0,711:0:0:711:25288:-1741.43,-214.032,0	0/1:209:117,92:117:4193:92:3289:-164.106,0,-309.783	0/1:100:49,51:49:1748:51:1828:-96.3703,0,-126.461	1/1:467:0,467:0:0:467:16703:-1145.83,-140.581,0	1/1:514:0,514:0:0:514:18270:-1260.54,-154.729,0	0/1:146:67,79:67:2355:79:2813:-150.684,0,-165.884	1/1:187:0,187:0:0:187:6690:-460.202,-56.2926,0	1/1:102:0,102:0:0:102:3533:-245.922,-30.7051,0	1/1:69:0,68:0:0:68:2429:-166.965,-20.47,0	1/1:67:0,67:0:0:67:2408:-165.193,-20.169,0	0/1:102:44,58:44:1576:58:2035:-110.61,0,-109.74	0/1:66:28,38:28:1004:38:1368:-73.9838,0,-70.364	1/1:145:0,145:0:0:145:5174:-355.767,-43.6494,0	1/1:44:0,44:0:0:44:1580:-109.981,-13.2453,0	0/1:129:52,77:52:1872:77:2742:-149.848,0,-128.198	1/1:91:0,91:0:0:91:3219:-222.443,-27.3937,0	0/1:532:110,422:110:3933:422:15055:-875.281,0,-189.988	1/1:126:1,125:1:36:125:4465:-305.091,-34.351,0	1/1:28:0,28:0:0:28:1008:-69.2259,-8.42884,0	1/1:330:13,317:13:464:317:11317:-737.044,-57.9162,0	1/1:92:0,92:0:0:92:3289:-227.466,-27.6948,0	0/1:36:16,20:16:568:20:720:-40.1561,0,-40.1924	1/1:761:0,761:0:0:761:27106:-1869.87,-229.084,0	1/1:627:1,626:1:36:626:22234:-1531.22,-185.179,0	0/1:45:21,24:21:748:24:864:-45.8292,0,-53.5801	0/1:85:43,42:43:1539:42:1512:-78.1145,0,-111.899	1/1:272:1,271:1:36:271:9601:-660.731,-78.3133,0	0/1:86:64,22:64:2292:22:773:-27.8417,0,-178.32	1/1:168:2,166:2:72:166:5908:-399.634,-43.7898,0	0/1:62:30,32:30:1065:32:1152:-60.489,0,-76.7371	0/1:59:21,38:21:748:38:1356:-77.1877,0,-48.9834	1/1:181:0,181:0:0:181:6448:-445.782,-54.4864,0	1/1:60:1,59:1:36:59:2090:-141.014,-14.495,0	0/1:211:21,190:21:752:190:6741:-403.528,0,-3.93578	1/1:68:0,68:0:0:68:2429:-169.006,-20.47,0	1/1:92:0,92:0:0:92:3251:-224.682,-27.6948,0	1/1:328:14,314:14:500:314:11137:-722.952,-53.7913,0	1/1:39:0,39:0:0:39:1392:-96.9995,-11.7402,0	0/1:44:24,20:24:864:20:720:-36.3568,0,-64.4354	1/1:129:0,129:0:0:129:4610:-316.892,-38.8329,0	0/1:106:50,56:50:1777:56:1982:-105.36,0,-125.64	0/1:104:59,45:59:2116:45:1592:-78.8795,0,-158.464	0/1:126:59,67:59:2120:67:2374:-126.223,0,-151.273	1/1:420:13,407:13:468:407:14484:-955.627,-84.6786,0	0/1:105:43,62:43:1521:62:2220:-121.329,0,-104.621	1/1:81:0,81:0:0:81:2893:-200.611,-24.3834,0	1/1:183:0,183:0:0:183:6493:-448.919,-55.0885,0	0/1:101:64,37:64:2289:37:1328:-60.6684,0,-173.813	1/1:49:0,49:0:0:49:1749:-122.048,-14.7505,0	1/1:101:0,101:0:0:101:3624:-249.681,-30.404,0	1/1:142:0,142:0:0:142:5070:-348.605,-42.7463,0	1/1:48:1,47:1:36:47:1673:-112.531,-10.9284,0	0/1:58:29,29:29:1040:29:1044:-54.9852,0,-75.9595	0/1:66:35,31:35:1252:31:1112:-56.672,0,-91.5264	0/1:263:32,231:32:1152:231:8270:-488.956,0,-23.2757	0/1:435:45,390:45:1616:390:13934:-828.239,0,-13.4656	0/1:76:53,23:53:1904:23:809:-34.1486,0,-147.301	1/1:4:0,4:0:0:4:144:-10.0429,-1.20412,0	1/1:71:0,71:0:0:71:2537:-175.154,-21.3731,0
chr11	26829083	.	A	C	17636.1	PASS	AB=0.376568;ABP=435.61;AC=43;AF=0.228723;AN=188;AO=1238;CIGAR=1X;DP=7725;DPB=7725;DPRA=1.05999;EPP=2691.29;EPPR=14069.8;GTI=3;LEN=1;MEANALT=1.02041;MQM=54.3998;MQMR=59.6175;NS=94;NUMALT=1;ODDS=0.363818;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=44292;QR=232738;RO=6486;RPL=1238;RPP=2691.29;RPPR=14069.8;RPR=0;RUN=1;SAF=1238;SAP=2691.29;SAR=0;SRF=6486;SRP=14087.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:20:20,0:20:716:0:0:0,-6.0206,-63.5622	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.467	0/1:120:80,40:80:2872:40:1440:-93.262,0,-222.585	0/1:160:107,53:107:3844:53:1891:-122.068,0,-297.975	0/1:62:48,14:48:1716:14:495:-25.9032,0,-135.922	0/1:20:7,13:7:252:13:460:-35.6179,0,-17.0084	0/0:148:148,0:148:5313:0:0:0,-44.5524,-477.08	0/0:140:140,0:140:5005:0:0:0,-42.1442,-449.105	0/1:32:13,19:13:468:19:680:-51.7455,0,-32.8267	0/0:78:78,0:78:2777:0:0:0,-23.4803,-250.164	0/0:52:52,0:52:1872:0:0:0,-15.6536,-168.752	0/1:35:20,15:20:720:15:540:-38.0534,0,-54.5927	0/1:39:24,15:24:864:15:540:-36.888,0,-66.3342	0/0:57:57,0:57:2052:0:0:0,-17.1587,-184.951	0/1:27:18,9:18:648:9:320:-20.9629,0,-50.5217	0/0:34:34,0:34:1208:0:0:0,-10.235,-109.021	0/1:39:26,13:26:936:13:459:-29.7807,0,-72.3821	0/0:25:24,1:24:860:1:36:0,-3.93652,-74.1326	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8739	0/1:209:139,70:139:4988:70:2494:-161.515,0,-386.099	0/0:100:100,0:100:3565:0:0:0,-30.103,-320.96	0/1:115:54,61:54:1944:61:2178:-161.265,0,-139.592	0/1:26:14,12:14:504:12:428:-31.0052,0,-37.8666	0/0:68:67,1:67:2408:1:36:0,-16.8769,-213.24	0/0:63:63,0:63:2264:0:0:0,-18.9649,-203.994	0/1:328:206,122:206:7400:122:4362:-293.03,0,-567.261	0/0:218:218,0:218:7809:0:0:0,-65.6245,-702.796	0/1:15:10,5:10:360:5:180:-12.0131,0,-28.2289	0/0:372:371,1:371:13309:1:36:0,-108.386,-1193.05	0/1:110:64,46:64:2304:46:1652:-115.498,0,-174.493	0/0:54:54,0:54:1940:0:0:0,-16.2556,-173.934	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9273	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5156	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8821	0/1:70:38,32:38:1368:32:1152:-82.7771,0,-102.347	0/1:161:96,65:96:3452:65:2336:-160.622,0,-262.389	0/0:40:40,0:40:1440:0:0:0,-12.0412,-129.886	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:96:51,45:51:1832:45:1607:-115.495,0,-136.238	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.938	0/0:154:154,0:154:5486:0:0:0,-46.3586,-493.33	0/0:26:26,0:26:936:0:0:0,-7.82678,-84.5278	0/0:33:33,0:33:1180:0:0:0,-9.93399,-105.646	0/1:53:19,34:19:684:34:1216:-93.6992,0,-45.9357	0/1:117:92,25:92:3293:25:900:-45.7025,0,-261.342	0/0:205:205,0:205:7364:0:0:0,-61.7111,-662.751	0/0:133:133,0:133:4769:0:0:0,-40.037,-429.296	0/1:139:88,51:88:3160:51:1832:-122.946,0,-242.684	0/0:201:201,0:201:7220:0:0:0,-60.507,-648.812	0/0:27:27,0:27:949:0:0:0,-8.12781,-85.7204	0/0:148:148,0:148:5300:0:0:0,-44.5524,-476.765	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/1:27:15,12:15:540:12:428:-30.6373,0,-40.8087	0/0:225:225,0:225:8092:0:0:0,-67.7317,-726.234	0/1:17:9,8:9:324:8:284:-20.7116,0,-24.3883	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1216	0/1:47:32,15:32:1152:15:540:-34.593,0,-89.8371	0/1:66:51,15:51:1832:15:540:-29.0333,0,-145.288	0/1:4:3,1:3:108:1:36:-2.39156,0,-8.87105	0/1:192:129,63:129:4644:63:2260:-145.678,0,-360.316	0/0:207:205,1:205:7372:1:36:0,-58.7761,-659.851	0/1:41:21,20:21:752:20:703:-51.1042,0,-55.6622	0/1:82:58,24:58:2076:24:864:-53.3418,0,-161.704	0/0:105:103,2:103:3700:2:72:0,-24.7764,-326.349	0/0:93:92,1:92:3304:1:36:0,-24.4001,-292.932	0/1:15:6,9:6:216:9:324:-24.9486,0,-15.2751	0/0:110:110,0:110:3944:0:0:0,-33.1133,-355.069	0/0:78:78,0:78:2800:0:0:0,-23.4803,-252.233	0/1:19:14,5:14:500:5:180:-10.8206,0,-39.6166	0/0:116:116,0:116:4164:0:0:0,-34.9195,-374.776	0/1:39:22,17:22:792:17:612:-43.5284,0,-59.8655	0/0:107:107,0:107:3848:0:0:0,-32.2102,-346.322	0/1:160:112,48:112:4024:48:1704:-105.228,0,-314.171	0/1:94:41,53:41:1464:53:1900:-142.363,0,-103.686	0/1:77:55,22:55:1976:22:792:-48.2333,0,-154.898	0/1:8:4,4:4:144:4:144:-10.8719,0,-10.9054	0/1:135:84,51:84:3020:51:1813:-122.443,0,-231.345	0/0:166:166,0:166:5957:0:0:0,-49.971,-535.694	0/0:263:263,0:263:9433:0:0:0,-79.1709,-848.91	0/1:83:51,32:51:1828:32:1143:-78.1135,0,-139.815	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.313	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.442	0/0:73:73,0:73:2601:0:0:0,-21.9752,-234.333	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6899	0/1:34:18,16:18:648:16:576:-41.7755,0,-48.416	0/1:44:28,16:28:1008:16:576:-38.7985,0,-77.791	0/1:21:16,5:16:576:5:176:-9.84273,0,-45.8487	0/1:56:39,17:39:1400:17:599:-37.1794,0,-109.437	0/1:35:16,19:16:576:19:684:-51.3096,0,-41.6389	0/0:121:121,0:121:4344:0:0:0,-36.4246,-391.072	0/0:54:54,0:54:1944:0:0:0,-16.2556,-175.224
chr11	26900654	.	ATTCA	TTTCG,TTTCA	1.15587e+06	PASS	AB=0.505064,0.490609;ABP=7.38718,18.0594;AC=143,45;AF=0.760638,0.239362;AN=188;AO=43562,9681;CIGAR=1X3M1X,1X4M;DP=53485;DPB=53492.6;DPRA=0,2.03716;EPP=93929.1,20860.3;EPPR=18.2106;GTI=1;LEN=5,1;MEANALT=3.53191,4.31148;MQM=59.7981,59.9916;MQMR=58.7143;NS=94;NUMALT=2;ODDS=11.0861;PAIRED=0,0;PAIREDR=0;PAO=16,16;PQA=472.5,472.5;PQR=0;PRO=0;QA=1535882,346611;QR=207;RO=7;RPL=43485,9662;RPP=93929.1,20860.3;RPPR=18.2106;RPR=77,19;RUN=1,1;SAF=43562,9681;SAP=94596.7,21025;SAR=0,0;SRF=7;SRP=18.2106;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:78:0,77,0:0:0:77,0:2735,0:-246.104,-23.1793,0,-246.104,-23.1793,-246.104	1/1:368:0,368,0:0:0:368,0:12990,0:-1168.75,-110.779,0,-1168.75,-110.779,-1168.75	1/2:302:0,156,146:0:0:156,146:5454,5208:-867.934,-424.911,-377.95,-443.377,0,-399.426	1/2:385:0,219,162:0:0:219,162:7716,5805:-1101.68,-473.492,-407.567,-628.237,0,-579.471	1/2:160:0,75,83:0:0:75,83:2651,2988:-459.71,-243.806,-221.229,-215.901,0,-190.915	1/2:74:0,36,38:0:0:36,38:1249,1360:-212.781,-111.261,-100.424,-101.872,0,-90.4326	1/1:305:0,303,1:0:0:303,1:10671,36:-959.952,-91.2121,0,-957.014,-88.2447,-956.713	1/1:254:0,249,2:0:0:249,2:8733,72:-785.628,-74.9565,0,-779.753,-69.0614,-779.151	1/2:189:0,104,83:0:0:104,83:3651,2969:-539.263,-242.13,-210.823,-297.162,0,-272.177	1/1:110:0,109,0:0:0:109,0:3840,0:-345.439,-32.8123,0,-345.439,-32.8123,-345.439	1/1:455:0,454,0:0:0:454,0:15927,0:-1432.69,-136.668,0,-1432.69,-136.668,-1432.69	1/2:61:0,31,30:0:0:31,30:1096,1080:-177.743,-88.4823,-79.1504,-89.6168,0,-80.5859	1/2:56:0,27,28:0:0:27,28:953,1004:-159.489,-81.8872,-73.7594,-77.5976,0,-69.1687	1/1:92:0,92,0:0:0:92,0:3222,0:-290.202,-27.6948,0,-290.202,-27.6948,-290.202	1/2:67:0,38,29:0:0:38,29:1353,1040:-195.459,-85.1845,-73.7454,-110.632,0,-101.902	1/1:56:0,56,0:0:0:56,0:1988,0:-179.195,-16.8577,0,-179.195,-16.8577,-179.195	1/2:72:0,42,30:0:0:42,30:1488,1055:-207.445,-86.2286,-73.5854,-121.569,0,-112.538	1/2:44:0,22,22:0:0:22,22:782,792:-128.647,-64.9256,-58.3029,-64.023,0,-57.4003	1/1:187:0,186,0:0:0:186,0:6588,0:-592.656,-55.9916,0,-592.656,-55.9916,-592.656	1/2:474:0,259,213:0:0:259,213:9159,7622:-1367.5,-621.616,-543.65,-745.955,0,-681.836	1/1:226:0,225,0:0:0:225,0:7891,0:-709.907,-67.7318,0,-709.907,-67.7318,-709.907	1/2:281:0,97,182:0:0:97,182:3408,6512:-808.437,-531.093,-501.893,-277.416,0,-222.628	1/2:206:0,101,105:0:0:101,105:3567,3768:-598.145,-307.71,-277.306,-290.79,0,-259.182	1/1:265:0,264,0:0:0:264,0:9256,0:-832.597,-79.4719,0,-832.597,-79.4719,-832.597	1/1:172:0,171,0:0:0:171,0:6032,0:-542.515,-51.4761,0,-542.515,-51.4761,-542.515	1/2:686:0,346,339:0:0:346,339:12249,12184:-1991.8,-994.04,-889.884,-997.834,0,-895.785	1/1:452:0,445,1:0:0:445,1:15722,36:-1414.34,-133.958,0,-1411.4,-131.012,-1411.1	1/2:18:0,10,8:0:0:10,8:352,288:-52.5109,-23.8592,-20.8489,-29.008,0,-26.5997	1/1:550:0,548,0:0:0:548,0:19357,0:-1741.36,-164.964,0,-1741.36,-164.964,-1741.36	1/2:352:0,156,196:0:0:156,196:5449,7035:-1017.44,-574.207,-527.246,-443.587,0,-384.585	1/1:250:0,248,0:0:0:248,0:8755,0:-787.434,-74.6554,0,-787.434,-74.6554,-787.434	1/2:1973:1,982,978:1:36:982,978:34626,35071:-5676.44,-2857.58,-2564.91,-2816.25,0,-2524.78	1/1:2503:0,2481,8:0:0:2481,8:87851,284:-7901.41,-746.855,0,-7878.27,-723.693,-7875.87	1/1:2869:0,2855,3:0:0:2855,3:100567,108:-9044.51,-859.441,0,-9035.7,-850.618,-9034.79	1/1:4489:0,4472,0:0:0:4472,0:157188,0:-14136.5,-1346.21,0,-14136.5,-1346.21,-14136.5	1/1:2823:0,2812,3:0:0:2812,3:99103,108:-8913.83,-846.496,0,-8905.02,-837.663,-8904.12	1/2:167:0,93,74:0:0:93,74:3288,2660:-485.154,-217.369,-189.373,-268.141,0,-245.865	1/2:323:1,161,161:1:36:161,161:5693,5733:-927.602,-464.263,-418.735,-460.638,0,-415.109	1/1:417:0,412,0:0:0:412,0:14534,0:-1307.48,-124.024,0,-1307.48,-124.024,-1307.48	1/1:2878:0,2860,2:0:0:2860,2:100827,72:-9068.38,-860.946,0,-9062.5,-855.067,-9061.9	1/2:318:0,170,145:0:0:170,145:6009,5198:-913.376,-423.985,-372.81,-489.424,0,-445.775	1/1:237:0,237,0:0:0:237,0:8393,0:-755.379,-71.3441,0,-755.379,-71.3441,-755.379	1/1:344:0,343,0:0:0:343,0:12030,0:-1082.22,-103.253,0,-1082.22,-103.253,-1082.22	1/1:60:0,59,0:0:0:59,0:2096,0:-188.592,-17.7608,0,-188.592,-17.7608,-188.592	1/1:55:0,54,0:0:0:54,0:1918,0:-172.597,-16.2556,0,-172.597,-16.2556,-172.597	1/2:204:0,113,90:0:0:113,90:3978,3228:-587.269,-263.427,-229.411,-323.975,0,-296.883	1/2:347:0,162,184:0:0:162,184:5731,6577:-1003.06,-536.271,-487.504,-466.789,0,-411.4	1/1:463:0,458,0:0:0:458,0:16082,0:-1446.73,-137.872,0,-1446.73,-137.872,-1446.73	1/1:276:0,276,0:0:0:276,0:9739,0:-876.473,-83.0843,0,-876.473,-83.0843,-876.473	1/2:290:0,125,164:0:0:125,164:4427,5874:-839.663,-479.041,-441.413,-360.618,0,-311.249	1/1:423:0,422,0:0:0:422,0:15000,0:-1349.32,-127.035,0,-1349.32,-127.035,-1349.32	1/1:3139:0,3121,2:0:0:3121,2:110272,72:-9918.89,-939.515,0,-9913.02,-933.637,-9912.41	1/1:361:0,359,0:0:0:359,0:12755,0:-1147.11,-108.07,0,-1147.11,-108.07,-1147.11	1/1:123:0,123,0:0:0:123,0:4326,0:-389.521,-37.0267,0,-389.52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chr11	26900668	.	G	T	929330	PASS	AB=0.505414;ABP=7.94801;AC=143;AF=0.760638;AN=188;AO=42991;CIGAR=1X;DP=52623;DPB=52623;DPRA=0;EPP=93348.1;EPPR=20883.9;GTI=1;LEN=1;MEANALT=1.1383;MQM=59.7991;MQMR=59.9872;NS=94;NUMALT=1;ODDS=12.8321;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1533359;QR=343597;RO=9616;RPL=42990;RPP=93348.1;RPPR=20875.2;RPR=1;RUN=1;SAF=42991;SAP=93356.8;SAR=0;SRF=9615;SRP=20875.2;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:74:0,74:0:0:74:2598:-234.061,-22.2762,0	1/1:357:0,357:0:0:357:12790:-1150.21,-107.468,0	0/1:297:148,149:148:5269:149:5318:-388.63,0,-384.942	0/1:384:164,220:164:5881:220:7843:-590.29,0,-413.802	0/1:159:85,74:85:3029:74:2640:-189.98,0,-224.976	0/1:71:37,34:37:1320:34:1187:-85.7573,0,-97.7288	1/1:302:0,302:0:0:302:10740:-966.328,-90.9111,0	1/1:248:2,246:2:72:246:8771:-782.526,-67.8187,0	0/1:189:83,106:83:2961:106:3743:-280.173,0,-209.827	1/1:107:0,107:0:0:107:3823:-344.266,-32.2102,0	1/1:445:0,445:0:0:445:15898:-1430.29,-133.958,0	0/1:61:30,31:30:1072:31:1108:-81.6673,0,-78.4296	0/1:57:30,27:30:1080:27:968:-70.2787,0,-80.3545	1/1:89:0,89:0:0:89:3155:-284.175,-26.7917,0	0/1:67:29,38:29:1018:38:1347:-101.36,0,-71.7614	1/1:56:0,56:0:0:56:1995:-179.823,-16.8577,0	0/1:72:30,42:30:1062:42:1486:-112.357,0,-74.2158	0/1:44:22,22:22:788:22:788:-57.9986,0,-57.9995	1/1:183:0,183:0:0:183:6498:-584.83,-55.0885,0	0/1:466:210,256:210:7494:256:9146:-682.756,0,-534.222	1/1:221:1,220:1:36:220:7844:-702.301,-62.9294,0	0/1:278:180,98:180:6435:98:3507:-232.09,0,-495.551	0/1:202:103,99:103:3669:99:3547:-258.471,0,-269.605	1/1:257:0,257:0:0:257:9086:-817.551,-77.3647,0	1/1:169:0,169:0:0:169:5996:-539.693,-50.8741,0	0/1:680:341,339:341:12196:339:12112:-885.208,0,-892.781	1/1:447:1,446:1:36:446:15859:-1422.88,-130.962,0	0/1:18:8,10:8:288:10:360:-27.3258,0,-20.8489	1/1:541:0,541:0:0:541:19278:-1734.57,-162.857,0	0/1:345:189,155:189:6761:155:5516:-392.651,0,-504.645	1/1:244:0,243:0:0:243:8659:-778.576,-73.1503,0	0/1:1951:978,971:978:35010:971:34695:-2534.29,0,-2562.86	1/1:2462:8,2453:8:288:2453:87500:-7844.14,-714.838,0	1/1:2835:1,2834:1:36:2834:100852:-9066.14,-849.822,0	1/1:4403:0,4402:0:0:4402:156823:-14103.5,-1325.13,0	1/1:2769:1,2766:1:36:2766:98757:-8879.68,-829.712,0	0/1:163:72,91:72:2549:91:3237:-242.476,0,-180.592	0/1:318:156,162:156:5554:162:5764:-422.116,0,-404.257	1/1:412:0,412:0:0:412:14694:-1322.16,-124.024,0	1/1:2813:0,2813:0:0:2813:100346:-9024.12,-846.797,0	0/1:308:144,164:144:5163:164:5876:-435.454,0,-372.092	1/1:236:0,235:0:0:235:8357:-751.776,-70.7421,0	1/1:341:0,341:0:0:341:12155:-1093.68,-102.651,0	1/1:59:0,59:0:0:59:2105:-189.715,-17.7608,0	1/1:55:0,55:0:0:55:1952:-175.949,-16.5567,0	0/1:203:89,114:89:3192:114:4070:-305.377,0,-226.394	0/1:343:184,159:184:6573:159:5663:-406.53,0,-488.398	1/1:454:0,454:0:0:454:16168:-1454.24,-136.668,0	1/1:270:0,270:0:0:270:9659:-869.261,-81.2781,0	0/1:291:167,124:167:5936:124:4451:-313.159,0,-446.749	1/1:414:0,414:0:0:414:14802:-1331.84,-124.626,0	1/1:3088:2,3085:2:72:3085:110038:-9890.74,-922.726,0	1/1:357:0,357:0:0:357:12717:-1143.44,-107.468,0	1/1:121:0,121:0:0:121:4324:-389.336,-36.4246,0	0/1:2022:1015,1007:1015:36260:1007:35958:-2626.17,0,-2653.49	1/1:324:0,324:0:0:324:11540:-1038.45,-97.5337,0	0/1:119:62,57:62:2224:57:2048:-148.769,0,-164.602	1/1:2449:2,2447:2:68:2447:87495:-7863.49,-730.765,0	1/1:2638:2,2636:2:72:2636:94063:-8453.14,-787.28,0	0/1:193:90,103:90:3209:103:3652:-270.783,0,-230.933	0/1:93:47,46:47:1680:46:1633:-119.261,0,-123.491	0/1:2157:1015,1141:1015:36317:1141:40803:-3020.84,0,-2617.93	0/1:178:81,97:81:2885:97:3472:-259.108,0,-206.302	1/1:400:2,398:2:72:398:14181:-1269.19,-113.575,0	0/1:108:56,52:56:1974:52:1858:-134.988,0,-145.422	0/1:220:135,85:135:4836:85:3048:-208.322,0,-369.167	1/1:415:6,409:6:216:409:14598:-1293.71,-105.137,0	1/1:237:1,236:1:36:236:8446:-756.484,-67.7458,0	0/1:364:180,184:180:6420:184:6563:-481.144,0,-468.303	1/1:134:0,134:0:0:134:4777:-430.078,-40.338,0	1/1:73:0,73:0:0:73:2604:-234.607,-21.9752,0	0/1:2055:987,1067:987:35265:1067:38123:-2810.47,0,-2554.05	1/1:224:2,222:2:72:222:7891:-703.316,-60.594,0	0/1:99:47,52:47:1692:52:1854:-137.335,0,-122.765	1/1:410:1,409:1:36:409:14508:-1301.19,-119.824,0	0/1:360:205,155:205:7351:155:5559:-391.786,0,-553.265	0/1:233:102,131:102:3632:131:4660:-348.913,0,-256.944	0/1:176:99,77:99:3523:77:2749:-194.67,0,-264.297	0/1:2227:1065,1161:1065:38035:1161:41475:-3059.49,0,-2751.44	0/1:210:122,88:122:4372:88:3123:-218.066,0,-330.437	1/1:221:0,221:0:0:221:7890:-710.049,-66.5276,0	1/1:491:1,490:1:36:490:17487:-1569.71,-144.207,0	0/1:81:36,45:36:1287:45:1610:-120.778,0,-91.7494	1/1:70:0,70:0:0:70:2501:-225.341,-21.0721,0	1/1:79:0,79:0:0:79:2821:-254.128,-23.7814,0	1/1:117:0,117:0:0:117:4119:-370.76,-35.2205,0	1/1:43:0,43:0:0:43:1544:-139.251,-12.9443,0	0/1:92:49,43:49:1760:43:1511:-108.35,0,-130.989	0/1:65:35,30:35:1252:30:1080:-77.8902,0,-93.4181	0/1:507:243,264:243:8669:264:9420:-695.128,0,-627.583	0/1:802:385,414:385:13750:414:14774:-1087.32,0,-996.291	0/1:66:48,18:48:1720:18:640:-38.0608,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chr11	27325511	.	GCG	ACA,GCA	154411	PASS	AB=0.469944,0.528186;ABP=32.38,28.8388;AC=141,47;AF=0.75,0.25;AN=188;AO=5317,1988;CIGAR=1X1M1X,2M1X;DP=7317;DPB=7317.33;DPRA=0,1.34899;EPP=11548.7,4319.9;EPPR=0;GTI=0;LEN=3,1;MEANALT=1.70213,2.10909;MQM=59.8132,59.9648;MQMR=0;NS=94;NUMALT=2;ODDS=2.28229;PAIRED=0,0;PAIREDR=0;PAO=0.5,0.5;PQA=18,18;PQR=0;PRO=0;QA=187139,71095;QR=0;RO=0;RPL=1,0;RPP=11540,4319.9;RPPR=0;RPR=5316,1988;RUN=1,1;SAF=1,0;SAP=11540,4319.9;SAR=5316,1988;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:17:0,17,0:0:0:17,0:591,0:-53.5125,-5.11751,0,-53.5125,-5.11751,-53.5125	1/1:38:0,38,0:0:0:38,0:1330,0:-119.998,-11.4391,0,-119.998,-11.4391,-119.998	1/2:133:0,56,75:0:0:56,75:1996,2692:-382.384,-219.683,-202.826,-162.794,0,-140.216	1/2:223:0,120,103:0:0:120,103:4249,3694:-647.755,-301.655,-265.531,-346.456,0,-315.45	1/2:43:0,18,25:0:0:18,25:648,900:-126.666,-73.7953,-68.3767,-53.2302,0,-45.7045	1/2:13:0,4,9:0:0:4,9:129,324:-37.1862,-26.7966,-25.5925,-10.7235,0,-8.01427	1/1:44:0,44,0:0:0:44,0:1558,0:-140.506,-13.2453,0,-140.506,-13.2453,-140.506	1/1:174:0,174,0:0:0:174,0:6088,0:-548.024,-52.3792,0,-548.024,-52.3792,-548.024	1/2:37:0,19,18:0:0:19,18:673,635:-106.882,-52.0584,-46.3389,-55.1771,0,-49.7585	1/1:58:0,56,2:0:0:56,2:1982,72:-178.289,-16.8577,0,-172.414,-10.623,-171.812	1/1:27:0,27,0:0:0:27,0:958,0:-86.5324,-8.12781,0,-86.5324,-8.12781,-86.5324	1/2:79:0,41,38:0:0:41,38:1422,1349:-225.786,-110.266,-97.9236,-115.871,0,-104.432	1/2:57:0,18,39:0:0:18,39:646,1400:-167.252,-114.559,-109.14,-53.0519,0,-41.3117	1/1:41:0,40,0:0:0:40,0:1383,0:-124.545,-12.0412,0,-124.545,-12.0412,-124.545	1/2:53:0,26,27:0:0:26,27:903,972:-153.071,-79.6701,-71.8433,-73.7538,0,-65.626	1/1:42:0,42,0:0:0:42,0:1488,0:-134.141,-12.6433,0,-134.141,-12.6433,-134.141	1/2:27:0,10,17:0:0:10,17:357,612:-78.9692,-50.2959,-47.2856,-29.0282,0,-23.9107	1/2:35:0,17,18:0:0:17,18:593,639:-100.646,-52.4197,-47.3022,-48.5776,0,-43.1591	1/1:20:0,20,0:0:0:20,0:701,0:-63.4133,-6.0206,0,-63.4133,-6.0206,-63.4133	1/2:140:0,62,78:0:0:62,78:2190,2804:-407.375,-229.033,-210.369,-178.699,0,-155.218	1/1:80:0,80,0:0:0:80,0:2824,0:-254.398,-24.0824,0,-254.398,-24.0824,-254.398	1/2:132:0,40,92:0:0:40,92:1419,3299:-385.043,-269.433,-257.392,-115.966,0,-88.2709	1/2:38:0,15,23:0:0:15,23:530,828:-111.081,-67.9204,-63.405,-43.5166,0,-36.5929	1/1:34:0,34,0:0:0:34,0:1187,0:-107.132,-10.235,0,-107.132,-10.235,-107.132	1/1:41:0,41,0:0:0:41,0:1435,0:-129.439,-12.3422,0,-129.439,-12.3422,-129.439	1/2:230:0,121,109:0:0:121,109:4229,3916:-663.82,-319.819,-283.395,-344.355,0,-311.543	1/1:153:0,152,0:0:0:152,0:5378,0:-483.932,-45.7566,0,-483.932,-45.7566,-483.932	1/2:14:0,4,10:0:0:4,10:144,360:-41.4837,-29.734,-28.5299,-12.1095,0,-9.0992	1/1:313:0,312,1:0:0:312,1:11057,36:-994.551,-93.9214,0,-991.613,-90.6241,-991.312	1/2:140:0,58,82:0:0:58,82:2055,2940:-407.553,-240.149,-222.69,-167.76,0,-143.075	1/1:35:0,34,1:0:0:34,1:1185,36:-106.594,-10.235,0,-103.656,-6.93778,-103.355	1/2:8:0,2,6:0:0:2,6:64,216:-23.1305,-17.9843,-17.3823,-5.47604,0,-3.66986	1/1:7:0,7,0:0:0:7,0:247,0:-22.5729,-2.10721,0,-22.5729,-2.10721,-22.5729	1/2:11:0,6,5:0:0:6,5:206,180:-31.7642,-15.0469,-13.2407,-17.0696,0,-15.5644	1/2:7:0,1,6:0:0:1,6:36,216:-20.9217,-17.9843,-17.6833,-3.29724,0,-1.49106	1/1:14:0,14,0:0:0:14,0:495,0:-44.8842,-4.21442,0,-44.8842,-4.21442,-44.8842	1/1:148:0,147,0:0:0:147,0:5196,0:-467.419,-44.2514,0,-467.419,-44.2514,-467.419	1/2:116:0,72,44:0:0:72,44:2532,1584:-335.701,-129.606,-107.932,-206.452,0,-193.206	1/1:21:0,21,0:0:0:21,0:737,0:-66.6496,-6.32163,0,-66.6496,-6.32163,-66.6496	1/1:5:0,5,0:0:0:5,0:173,0:-15.9097,-1.50515,0,-15.9097,-1.50515,-15.9097	1/2:226:0,122,104:0:0:122,104:4320,3714:-655.029,-303.154,-266.428,-352.231,0,-320.924	1/1:19:0,19,0:0:0:19,0:661,0:-59.8108,-5.71957,0,-59.8108,-5.71957,-59.8108	1/1:167:0,166,1:0:0:166,1:5859,36:-527.061,-49.971,0,-524.123,-46.6737,-523.822	1/1:30:0,30,0:0:0:30,0:1037,0:-93.6336,-9.0309,0,-93.6336,-9.0309,-93.6336	1/1:34:0,34,0:0:0:34,0:1189,0:-107.313,-10.235,0,-107.313,-10.235,-107.313	1/2:74:0,43,30:0:0:43,30:1518,1067:-210.64,-87.028,-74.0837,-123.683,0,-114.652	1/2:141:0,57,84:0:0:57,84:1984,3016:-407.703,-246.384,-229.225,-161.671,0,-136.385	1/1:274:0,274,0:0:0:274,0:9609,0:-864.73,-82.4822,0,-864.73,-82.4822,-864.73	1/1:76:0,76,0:0:0:76,0:2698,0:-243.042,-22.8783,0,-243.042,-22.8783,-243.042	1/2:131:0,60,71:0:0:60,71:2091,2542:-377.698,-207.657,-189.595,-170.394,0,-149.021	1/1:83:0,82,0:0:0:82,0:2877,0:-258.805,-24.6845,0,-258.805,-24.6845,-258.805	1/1:6:0,6,0:0:0:6,0:214,0:-19.6078,-1.80618,0,-19.6078,-1.80618,-19.6078	1/1:116:0,115,0:0:0:115,0:4056,0:-364.952,-34.6185,0,-364.952,-34.6185,-364.952	1/1:68:0,68,0:0:0:68,0:2363,0:-212.926,-20.47,0,-212.926,-20.47,-212.926	1/2:16:0,13,3:0:0:13,3:453,108:-46.0012,-9.17208,-5.25869,-37.1868,0,-36.2837	1/1:149:0,146,3:0:0:146,3:5156,108:-463.817,-43.9504,0,-455.005,-34.7783,-454.102	1/2:15:0,9,6:0:0:9,6:321,216:-44.1499,-17.9843,-15.2751,-26.524,0,-24.7179	1/1:8:0,8,0:0:0:8,0: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chr11	27431741	.	ACC	CCC,CCA	141539	PASS	AB=0.428986,0.568406;ABP=154.132,143.233;AC=140,48;AF=0.744681,0.255319;AN=188;AO=4763,1976;CIGAR=1X2M,1X1M1X;DP=6767;DPB=6768;DPRA=0,1.25822;EPP=10345.7,4293.84;EPPR=22.5536;GTI=1;LEN=1,3;MEANALT=1.79787,2.22807;MQM=59.7846,59.8295;MQMR=60;NS=94;NUMALT=2;ODDS=0.92219;PAIRED=0,0;PAIREDR=0;PAO=0.5,2;PQA=0,72;PQR=0;PRO=0.5;QA=170477,67264;QR=284;RO=9;RPL=0,0;RPP=10345.7,4293.84;RPPR=22.5536;RPR=4763,1976;RUN=1,1;SAF=4763,1976;SAP=10345.7,4293.84;SAR=0,0;SRF=9;SRP=22.5536;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:20:0,20,0:0:0:20,0:712,0:-64.4048,-6.0206,0,-64.4048,-6.0206,-64.4048	1/1:109:0,108,0:0:0:108,0:3856,0:-346.858,-32.5112,0,-346.858,-32.5112,-346.858	1/2:72:0,34,38:0:0:34,38:1220,1298:-205.196,-105.675,-95.4398,-99.8718,0,-88.4326	1/2:91:1,51,39:1:28:51,39:1828,1327:-254.269,-105.487,-92.3522,-146.932,0,-137.409	1/2:70:1,31,38:1:36:31,38:1096,1277:-189.457,-100.486,-94.0919,-86.3208,0,-77.8192	1/2:39:0,16,23:0:0:16,23:576,785:-111.045,-64.0382,-59.2217,-47.3585,0,-40.4348	1/1:97:0,97,0:0:0:97,0:3460,0:-311.228,-29.1999,0,-311.228,-29.1999,-311.228	1/1:96:0,96,0:0:0:96,0:3448,0:-310.261,-28.8989,0,-310.261,-28.8989,-310.261	1/2:28:0,13,15:0:0:13,15:464,500:-78.6396,-40.8013,-36.8879,-38.1841,0,-33.6687	1/1:116:0,114,0:0:0:114,0:4068,0:-365.853,-34.3174,0,-365.853,-34.3174,-365.853	1/1:54:0,54,0:0:0:54,0:1932,0:-174.147,-16.2556,0,-174.147,-16.2556,-174.147	1/2:51:0,20,31:0:0:20,31:720,1090:-147.806,-89.0717,-83.0511,-59.0905,0,-49.7586	1/2:49:0,11,38:0:0:11,38:396,1283:-136.641,-104.324,-101.013,-32.6714,0,-21.2323	1/1:53:0,53,0:0:0:53,0:1892,0:-170.556,-15.9546,0,-170.556,-15.9546,-170.556	1/2:58:0,29,29:0:0:29,29:1036,986:-164.789,-80.3146,-71.5847,-84.8225,0,-76.0926	1/1:30:0,30,0:0:0:30,0:1072,0:-96.7227,-9.0309,0,-96.7227,-9.0309,-96.7227	1/2:93:0,47,45:0:0:47,45:1688,1474:-256.829,-119.113,-104.965,-137.777,0,-124.231	1/2:67:0,24,43:0:0:24,43:860,1447:-187.719,-117.572,-110.348,-70.4971,0,-57.5528	1/1:37:0,37,0:0:0:37,0:1328,0:-119.768,-11.1381,0,-119.768,-11.1381,-119.768	1/2:119:0,63,56:0:0:63,56:2256,1918:-340.02,-156.031,-137.067,-184.338,0,-167.48	1/1:89:1,87,1:1:31:87,1:3108,36:-276.271,-23.7261,0,-273.635,-23.2273,-275.822	1/2:74:0,18,56:0:0:18,56:648,1951:-211.854,-158.978,-153.559,-53.2333,0,-36.3757	1/2:36:0,15,21:0:0:15,21:532,710:-101.243,-57.8929,-53.3774,-43.6976,0,-37.376	1/1:80:0,77,1:0:0:77,1:2756,36:-247.898,-23.1793,0,-244.961,-20.2419,-244.66	1/1:50:0,49,1:0:0:49,1:1754,36:-157.628,-14.7505,0,-154.691,-11.4532,-154.39	1/2:265:0,96,167:0:0:96,167:3440,5669:-740.113,-459.666,-430.767,-280.478,0,-230.206	1/1:189:0,185,2:0:0:185,2:6609,72:-594.359,-55.6906,0,-588.484,-49.7883,-587.882	1/2:24:0,7,17:0:0:7,17:252,584:-68.3311,-47.7644,-45.6572,-20.9217,0,-15.8042	1/1:213:0,213,0:0:0:213,0:7636,0:-686.996,-64.1194,0,-686.996,-64.1194,-686.996	1/2:98:0,43,55:0:0:43,55:1548,1823:-274.108,-147.786,-134.842,-126.669,0,-110.112	1/1:63:0,63,0:0:0:63,0:2256,0:-203.303,-18.9649,0,-203.303,-18.9649,-203.303	1/2:12:0,7,5:0:0:7,5:248,178:-35.0654,-14.8635,-12.7563,-20.557,0,-19.0518	1/1:18:0,18,0:0:0:18,0:648,0:-58.6519,-5.41854,0,-58.6519,-5.41854,-58.6519	1/2:25:0,6,19:0:0:6,19:216,648:-70.5438,-52.9148,-51.1086,-17.9843,0,-12.2648	1/2:10:0,6,4:0:0:6,4:216,139:-29.2804,-11.6484,-9.8422,-17.9843,0,-16.7802	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/1:125:1,122,1:1:21:122,1:4372,25:-391.473,-35.1682,0,-389.838,-34.8009,-391.125	1/2:175:0,77,98:0:0:77,98:2754,3355:-496.594,-272.601,-249.421,-224.344,0,-194.843	1/2:65:0,20,45:0:0:20,45:720,1455:-176.44,-117.68,-111.66,-59.1082,0,-45.5618	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/2:127:0,72,54:0:0:72,54:2576,1817:-357.337,-147.272,-125.597,-210.13,0,-193.874	1/1:34:0,34,0:0:0:34,0:1220,0:-110.089,-10.235,0,-110.089,-10.235,-110.089	1/1:109:0,108,0:0:0:108,0:3852,0:-346.555,-32.5112,0,-346.555,-32.5112,-346.555	1/1:39:0,39,0:0:0:39,0:1400,0:-126.299,-11.7402,0,-126.299,-11.7402,-126.299	1/1:42:0,42,0:0:0:42,0:1508,0:-135.787,-12.6433,0,-135.787,-12.6433,-135.787	1/1:44:0,44,0:0:0:44,0:1564,0:-141.051,-13.2453,0,-141.051,-13.2453,-141.051	1/2:80:0,39,41:0:0:39,41:1400,1333:-222.111,-107.895,-96.1545,-114.559,0,-102.217	1/1:185:1,184,0:1:36:184,0:6582,0:-588.67,-52.0923,0,-588.971,-55.3895,-591.909	1/1:85:1,83,1:1:34:83,1:2976,34:-264.709,-22.1886,0,-262.953,-22.9664,-265.41	1/2:126:0,58,68:0:0:58,68:2084,2358:-361.936,-192.005,-174.545,-170.284,0,-149.814	1/1:141:0,141,0:0:0:141,0:5056,0:-455.175,-42.4452,0,-455.175,-42.4452,-455.175	1/1:9:0,9,0:0:0:9,0:320,0:-29.1424,-2.70927,0,-29.1424,-2.70927,-29.1424	1/1:85:0,85,0:0:0:85,0:3044,0:-274.189,-25.5876,0,-274.189,-25.5876,-274.189	1/1:27:0,27,0:0:0:27,0:968,0:-87.4374,-8.12781,0,-87.4374,-8.12781,-87.4374	1/2:9:0,8,1:0:0:8,1:284,36:-26.0737,-2.93742,-0.529177,-23.1358,0,-22.8348	1/1:63:0,63,0:0:0:63,0:2260,0:-203.663,-18.9649,0,-203.663,-18.9649,-203.663	1/2:19:0,10,9:0:0:10,9:356,311:-54.6313,-25.6107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chr11	27431751	.	C	T	33573.6	PASS	AB=0.560721;ABP=113.239;AC=48;AF=0.255319;AN=188;AO=1943;CIGAR=1X;DP=6786;DPB=6786;DPRA=1.13032;EPP=4222.18;EPPR=10497.7;GTI=0;LEN=1;MEANALT=1.10909;MQM=59.8466;MQMR=59.7656;NS=94;NUMALT=1;ODDS=0.218802;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69371;QR=172675;RO=4833;RPL=0;RPP=4222.18;RPPR=10497.7;RPR=1943;RUN=1;SAF=1943;SAP=4222.18;SAR=0;SRF=4833;SRP=10497.7;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:19:19,0:19:671:0:0:0,-5.71957,-60.7158	0/0:109:109,0:109:3867:0:0:0,-32.8123,-348.209	0/1:73:36,37:36:1292:37:1320:-97.1268,0,-94.6086	0/1:88:50,38:50:1784:38:1364:-96.5701,0,-134.345	0/1:70:32,37:32:1148:37:1332:-99.1292,0,-82.5764	0/1:37:15,22:15:536:22:779:-59.294,0,-37.4367	0/0:99:99,0:99:3540:0:0:0,-29.802,-317.918	0/0:97:97,0:97:3468:0:0:0,-29.1999,-312.016	0/1:27:13,14:13:464:14:504:-37.5703,0,-33.9697	0/0:114:114,0:114:4075:0:0:0,-34.3174,-366.807	0/0:53:53,0:53:1899:0:0:0,-15.9546,-171.178	0/1:51:20,31:20:711:31:1107:-84.5821,0,-48.9608	0/1:51:13,38:13:468:38:1364:-107.708,0,-27.1071	0/0:53:53,0:53:1886:0:0:0,-15.9546,-170.006	0/1:59:29,29:29:1040:29:1040:-76.0948,0,-76.0933	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6008	0/1:92:47,44:47:1671:44:1580:-114.737,0,-122.915	0/1:66:23,43:23:820:43:1548:-119.745,0,-54.2545	0/0:38:38,0:38:1351:0:0:0,-11.4391,-121.886	0/1:119:65,54:65:2320:54:1936:-138.671,0,-173.238	0/0:88:87,1:87:3099:1:36:0,-22.8924,-274.783	0/1:72:18,54:18:640:54:1932:-152.482,0,-36.2552	0/1:35:15,20:15:536:20:720:-54.5927,0,-38.0388	0/0:81:81,0:81:2884:0:0:0,-24.3834,-259.778	0/0:50:49,1:49:1760:1:36:0,-11.4532,-154.719	0/1:259:99,159:99:3528:159:5704:-435.223,0,-239.639	0/0:193:190,2:190:6820:2:72:0,-51.3209,-606.829	0/1:24:7,17:7:252:17:595:-46.652,0,-15.8042	0/0:221:221,0:221:7896:0:0:0,-66.5276,-710.388	0/1:98:43,55:43:1536:55:1947:-146.005,0,-109.032	0/0:65:65,0:65:2320:0:0:0,-19.5669,-209.061	0/1:13:8,5:8:280:5:176:-12.2716,0,-21.6259	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/1:24:6,18:6:216:18:648:-51.419,0,-12.5658	0/1:11:6,5:6:212:5:180:-13.2407,0,-16.1135	0/0:4:4,0:4:135:0:0:0,-1.20412,-12.4825	0/0:127:127,0:127:4521:0:0:0,-38.2308,-406.92	0/1:177:80,97:80:2851:97:3451:-257.364,0,-202.361	0/1:68:23,45:23:824:45:1608:-124.537,0,-54.0133	0/0:5:5,0:5:176:0:0:0,-1.50515,-16.185	0/1:125:71,54:71:2536:54:1925:-135.896,0,-190.858	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.851	0/0:108:108,0:108:3868:0:0:0,-32.5112,-348.208	0/0:39:39,0:39:1396:0:0:0,-11.7402,-125.934	0/0:42:42,0:42:1486:0:0:0,-12.6433,-133.805	0/0:45:45,0:45:1612:0:0:0,-13.5463,-145.37	0/1:80:39,41:39:1404:41:1460:-107.585,0,-102.577	0/0:186:185,0:185:6601:0:0:0,-55.6905,-593.619	0/0:86:84,1:84:3004:1:36:0,-23.2513,-267.891	0/1:125:57,68:57:2036:68:2413:-179.787,0,-145.884	0/0:142:142,0:142:5088:0:0:0,-42.7463,-458.054	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/0:87:87,0:87:3112:0:0:0,-26.1896,-280.306	0/0:27:27,0:27:968:0:0:0,-8.12781,-87.4374	0/1:10:8,2:8:284:2:60:-2.68796,0,-22.8931	0/0:66:66,0:66:2360:0:0:0,-19.868,-212.659	0/1:18:9,9:9:324:9:320:-23.7156,0,-24.0873	0/0:18:16,0:16:572:0:0:0,-4.81648,-51.4539	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/1:56:30,26:30:1064:26:920:-66.1895,0,-79.214	0/1:109:44,65:44:1550:65:2319:-176.156,0,-106.593	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:140:63,77:63:2244:77:2741:-204.765,0,-160.08	0/0:164:158,6:158:5639:6:216:0,-29.5784,-487.738	0/1:85:44,41:44:1584:41:1452:-105.388,0,-117.264	0/1:49:20,29:20:720:29:1028:-78.0826,0,-49.4375	0/0:103:102,1:102:3660:1:32:0,-27.8068,-326.386	0/0:100:100,0:100:3574:0:0:0,-30.103,-321.862	0/1:33:6,27:6:212:27:959:-76.691,0,-9.49081	0/0:54:53,0:53:1904:0:0:0,-15.9546,-171.312	0/1:79:34,45:34:1224:45:1604:-120.866,0,-86.6857	0/1:22:15,7:15:532:7:252:-16.4063,0,-41.5904	0/0:67:67,0:67:2404:0:0:0,-20.169,-216.602	0/1:82:26,56:26:932:56:2008:-156.309,0,-59.5098	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.113	0/1:114:51,63:51:1832:63:2260:-169.345,0,-130.843	0/1:110:51,59:51:1820:59:2103:-156.418,0,-130.963	0/1:64:32,32:32:1144:32:1139:-83.5525,0,-83.7704	0/1:13:7,6:7:252:6:216:-15.8771,0,-19.1156	0/1:81:36,45:36:1271:45:1608:-120.598,0,-90.2793	0/0:128:128,0:128:4599:0:0:0,-38.5318,-414.067	0/1:114:64,50:64:2296:50:1776:-125.764,0,-172.497	0/1:86:32,54:32:1148:54:1923:-147.458,0,-77.6068	0/0:44:43,1:43:1531:1:36:0,-9.64704,-134.484	0/0:34:34,0:34:1212:0:0:0,-10.235,-109.384	0/0:79:79,0:79:2832:0:0:0,-23.7814,-255.118	0/0:20:20,0:20:712:0:0:0,-6.0206,-64.4007	0/1:67:23,44:23:812:44:1575:-121.872,0,-53.2143	0/1:52:28,24:28:995:24:856:-61.7075,0,-74.2105	0/1:61:21,40:21:752:40:1432:-110.812,0,-49.6388	0/1:93:34,59:34:1202:59:2107:-161.796,0,-80.4838	0/1:55:14,41:14:500:41:1472:-116.219,0,-28.7795	0/0:31:31,0:31:1116:0:0:0,-9.33193,-100.739	0/0:75:75,0:75:2658:0:0:0,-22.5772,-239.303
chr11	27903741	.	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chr11	28076945	.	C	T	155115	PASS	AB=0.5162;ABP=13.3527;AC=141;AF=0.75;AN=188;AO=7443;CIGAR=1X;DP=9657;DPB=9657;DPRA=0;EPP=16165.3;EPPR=4801.96;GTI=1;LEN=1;MEANALT=1.04255;MQM=59.9858;MQMR=60;NS=94;NUMALT=1;ODDS=4.53355;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=263249;QR=79049;RO=2210;RPL=7443;RPP=16165.3;RPPR=4801.96;RPR=0;RUN=1;SAF=0;SAP=16165.3;SAR=7443;SRF=0;SRP=4801.96;SRR=2210;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:33:0,33:0:0:33:1161:-104.795,-9.93399,0	1/1:155:0,155:0:0:155:5461:-491.619,-46.6597,0	0/1:113:63,50:63:2256:50:1769:-125.475,0,-169.287	0/1:138:76,62:76:2724:62:2220:-158.522,0,-203.861	0/1:90:40,50:40:1432:50:1777:-133.118,0,-102.085	0/1:57:24,33:24:864:33:1161:-87.636,0,-60.9239	1/1:135:0,135:0:0:135:4805:-432.607,-40.6391,0	1/1:146:1,145:1:36:145:5139:-459.054,-40.3521,0	0/1:105:47,58:47:1692:58:2074:-155.304,0,-120.959	1/1:104:0,104:0:0:104:3728:-335.717,-31.3071,0	1/1:53:0,53:0:0:53:1893:-170.646,-15.9546,0	1/1:61:0,61:0:0:61:2177:-196.197,-18.3628,0	0/1:57:32,25:32:1148:25:896:-63.8016,0,-86.4711	1/1:85:0,85:0:0:85:3037:-273.559,-25.5876,0	0/1:84:38,46:38:1360:46:1629:-121.61,0,-97.4141	1/1:54:0,54:0:0:54:1932:-174.157,-16.2556,0	0/1:70:29,41:29:1035:41:1457:-110.349,0,-72.391	0/1:57:28,29:28:996:29:1040:-76.7557,0,-72.7962	1/1:46:0,46:0:0:46:1629:-146.897,-13.8474,0	0/1:169:81,88:81:2908:88:3121:-230.243,0,-211.081	0/1:169:91,78:91:3260:78:2774:-199.026,0,-242.746	0/1:94:54,39:54:1924:39:1373:-95.5112,0,-145.081	0/1:120:58,62:58:2057:62:2186:-160.879,0,-149.276	0/1:113:13,100:13:464:100:3565:-287.041,0,-8.08112	1/1:38:0,38:0:0:38:1339:-120.809,-11.4391,0	0/1:277:153,124:153:5469:124:4387:-311.617,0,-408.952	1/1:245:0,245:0:0:245:8722:-784.972,-73.7524,0	0/1:37:17,20:17:599:20:720:-53.9907,0,-43.1	1/1:206:0,206:0:0:206:7293:-656.42,-62.0122,0	0/1:290:137,152:137:4889:152:5425:-401.022,0,-352.805	1/1:228:4,224:4:144:224:7855:-693.67,-55.3212,0	0/1:16:4,12:4:144:12:428:-34.0423,0,-8.49714	1/1:12:1,11:1:36:11:358:-28.9349,-0.0140851,0	0/1:14:8,6:8:288:6:212:-15.2104,0,-22.053	0/1:7:4,3:4:144:3:108:-7.96796,0,-11.2064	1/1:9:0,9:0:0:9:309:-28.1407,-2.70927,0	1/1:187:1,186:1:36:186:6647:-594.71,-52.6943,0	1/1:235:0,235:0:0:235:8228:-740.543,-70.7421,0	0/1:56:29,27:29:1040:27:972:-70.9402,0,-77.0567	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	0/1:130:70,60:70:2504:60:2152:-154.813,0,-186.479	1/1:46:0,46:0:0:46:1637:-147.617,-13.8474,0	1/1:267:2,265:2:68:265:9230:-824.217,-73.9173,0	1/1:64:0,64:0:0:64:2277:-205.19,-19.2659,0	1/1:49:0,49:0:0:49:1733:-156.253,-14.7505,0	1/1:116:0,115:0:0:115:4052:-364.506,-34.6185,0	0/1:145:82,63:82:2940:63:2256:-159.654,0,-221.185	1/1:208:0,208:0:0:208:7339:-660.561,-62.6142,0	1/1:114:0,114:0:0:114:4000:-360.19,-34.3174,0	0/1:124:44,80:44:1565:80:2830:-217.609,0,-103.812	1/1:137:0,137:0:0:137:4897:-440.881,-41.2411,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:168:0,168:0:0:168:5955:-536.056,-50.573,0	1/1:44:0,44:0:0:44:1561:-140.78,-13.2453,0	0/1:35:11,24:11:396:24:852:-66.4643,0,-25.4467	1/1:156:0,156:0:0:156:5519:-496.838,-46.9607,0	1/1:90:1,89:1:36:89:3063:-272.296,-23.4944,0	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:13:0,13:0:0:13:464:-42.0975,-3.91339,0	0/1:114:41,73:41:1476:73:2616:-201.37,0,-98.8188	1/1:102:0,102:0:0:102:3652:-328.884,-30.7051,0	0/1:5:4,1:4:144:1:36:-2.09312,0,-11.8085	0/1:185:100,85:100:3580:85:2985:-213.192,0,-266.717	1/1:193:1,192:1:36:192:6755:-604.428,-54.5005,0	0/1:53:34,19:34:1220:19:672:-44.8522,0,-94.1522	0/1:71:30,41:30:1068:41:1453:-109.691,0,-75.0589	1/1:154:0,154:0:0:154:5398:-485.953,-46.3586,0	1/1:136:2,134:2:72:134:4722:-418.303,-34.1034,0	0/1:26:13,13:13:464:13:468:-34.6329,0,-34.2707	0/1:88:40,48:40:1440:48:1705:-127.244,0,-103.407	0/1:83:33,50:33:1171:50:1773:-134.866,0,-80.7112	0/1:17:11,6:11:392:6:212:-14.3073,0,-30.5025	1/1:140:2,138:2:72:138:4849:-429.709,-35.3075,0	0/1:74:32,42:32:1144:42:1474:-110.674,0,-80.9933	1/1:198:0,198:0:0:198:6982:-628.445,-59.6039,0	0/1:185:77,107:77:2764:107:3746:-281.588,0,-193.252	0/1:138:73,65:73:2604:65:2252:-161.392,0,-193.067	0/1:171:78,93:78:2785:93:3282:-244.122,0,-199.413	0/1:41:14,27:14:496:27:919:-70.6701,0,-32.632	0/1:126:63,63:63:2244:63:2207:-160.961,0,-164.294	1/1:110:0,110:0:0:110:3827:-344.624,-33.1133,0	0/1:149:79,70:79:2836:70:2505:-180.849,0,-210.625	0/1:115:61,54:61:2192:54:1929:-139.266,0,-162.927	1/1:57:0,57:0:0:57:2029:-182.881,-17.1587,0	1/1:86:0,86:0:0:86:3064:-275.99,-25.8886,0	1/1:129:0,129:0:0:129:4632:-417.041,-38.8329,0	1/1:34:0,34:0:0:34:1193:-107.673,-10.235,0	0/1:81:39,42:39:1404:42:1481:-109.198,0,-102.276	0/1:61:31,30:31:1116:30:1076:-78.79,0,-82.3889	0/1:45:23,22:23:812:22:788:-57.6984,0,-59.8546	0/1:80:38,42:38:1364:42:1504:-111.572,0,-98.9783	0/1:62:45,17:45:1591:17:604:-36.0267,0,-124.816	1/1:169:3,166:3:108:166:5779:-510.096,-40.7989,0	1/1:78:0,78:0:0:78:2780:-250.442,-23.4803,0
chr11	28083858	.	A	C	22200.1	PASS	AB=0.477845;ABP=15.0377;AC=46;AF=0.244681;AN=188;AO=1354;CIGAR=1X;DP=6357;DPB=6357;DPRA=0.844335;EPP=2917.18;EPPR=10788.8;GTI=2;LEN=1;MEANALT=1.03846;MQM=59.9202;MQMR=59.97;NS=94;NUMALT=1;ODDS=3.0243;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48306;QR=179093;RO=4999;RPL=1351;RPP=2917.18;RPPR=10788.8;RPR=3;RUN=1;SAF=0;SAP=2943.18;SAR=1354;SRF=0;SRP=10858.2;SRR=4999;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:77:76,1:76:2714:1:36:0,-19.581,-240.904	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/1:131:73,58:73:2619:58:2084:-148.395,0,-196.522	0/1:120:63,57:63:2244:57:2044:-148.108,0,-166.097	0/1:40:22,18:22:784:18:648:-46.6061,0,-58.8427	0/1:22:10,12:10:356:12:428:-32.2361,0,-25.7586	0/0:63:63,0:63:2245:0:0:0,-18.9649,-202.312	0/0:112:111,1:111:3957:1:36:0,-30.1171,-352.723	0/1:41:20,21:20:720:21:756:-56.025,0,-52.7865	0/0:42:42,0:42:1512:0:0:0,-12.6433,-136.375	0/0:47:47,0:47:1692:0:0:0,-14.1484,-152.567	0/0:51:51,0:51:1828:0:0:0,-15.3525,-164.801	0/1:49:23,26:23:828:26:936:-69.809,0,-60.0936	0/0:65:64,0:64:2295:0:0:0,-19.2659,-206.451	0/1:33:17,16:17:612:16:576:-42.241,0,-45.4794	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/1:26:16,10:16:576:10:345:-23.554,0,-44.3482	0/1:29:13,16:13:468:16:572:-43.0836,0,-33.7298	0/0:27:27,0:27:960:0:0:0,-8.12781,-86.7163	0/1:149:95,54:95:3403:54:1936:-129.663,0,-261.63	0/1:93:42,51:42:1497:51:1810:-135.184,0,-107.025	0/1:102:41,60:41:1440:60:2145:-162.661,0,-99.2367	0/1:39:15,24:15:540:24:860:-65.9817,0,-37.1964	0/0:34:33,1:33:1184:1:36:0,-6.63674,-103.27	0/0:87:87,0:87:3113:0:0:0,-26.1896,-280.395	0/1:194:95,99:95:3420:99:3533:-259.621,0,-249.602	0/0:212:212,0:212:7593:0:0:0,-63.8184,-683.401	0/1:14:8,6:8:284:6:216:-15.5761,0,-21.6889	0/0:196:196,0:196:7025:0:0:0,-59.0019,-632.309	0/1:111:59,52:59:2112:52:1830:-131.372,0,-156.935	0/0:40:39,1:39:1396:1:36:0,-8.44292,-122.341	0/1:18:16,2:16:576:2:72:-1.41818,0,-46.7564	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.944	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/1:25:8,17:8:288:17:612:-47.8877,0,-18.7417	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.541	0/0:136:136,0:136:4875:0:0:0,-40.9401,-438.897	0/1:37:20,17:20:707:17:612:-44.2753,0,-52.8165	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:142:87,55:87:3111:55:1957:-133.657,0,-237.47	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:145:145,0:145:5169:0:0:0,-43.6493,-465.347	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:21:21,0:21:756:0:0:0,-6.32163,-68.3672	0/0:91:91,0:91:3260:0:0:0,-27.3937,-293.621	0/1:78:42,36:42:1504:36:1292:-93.1034,0,-112.174	0/0:103:103,0:103:3688:0:0:0,-31.0061,-332.123	0/0:80:80,0:80:2853:0:0:0,-24.0824,-257.007	0/1:56:39,17:39:1400:17:597:-37.1984,0,-109.442	0/0:85:85,0:85:3044:0:0:0,-25.5875,-274.185	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/0:188:188,0:188:6740:0:0:0,-56.5936,-606.595	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/1:13:8,5:8:288:5:176:-12.2716,0,-22.354	0/0:179:178,0:178:6370:0:0:0,-53.5833,-573.158	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:15:15,0:15:525:0:0:0,-4.51545,-47.5781	0/1:65:32,33:32:1133:33:1183:-87.2114,0,-82.7042	0/0:104:103,1:103:3700:1:36:0,-27.7088,-329.603	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/1:86:41,44:41:1472:44:1572:-115.824,0,-106.829	0/0:113:113,0:113:4064:0:0:0,-34.0164,-365.945	0/1:64:27,37:27:968:37:1313:-99.2038,0,-68.1714	0/1:55:37,18:37:1323:18:618:-39.3816,0,-102.815	0/0:118:118,0:118:4232:0:0:0,-35.5215,-381.05	0/0:163:163,0:163:5839:0:0:0,-49.0679,-525.621	0/1:37:14,23:14:504:23:824:-63.3452,0,-34.56	0/1:59:23,36:23:819:36:1288:-98.4605,0,-56.2708	0/1:34:21,13:21:756:13:460:-31.5004,0,-58.1322	0/1:32:12,20:12:432:20:720:-55.4958,0,-29.5882	0/0:171:171,0:171:6136:0:0:0,-51.4761,-552.33	0/1:43:26,17:26:932:17:608:-42.1077,0,-71.2546	0/0:84:84,0:84:3012:0:0:0,-25.2865,-271.309	0/1:85:30,55:30:1061:55:1948:-149.995,0,-70.2118	0/1:124:76,48:76:2724:48:1720:-117.756,0,-208.075	0/1:44:28,16:28:1004:16:576:-38.9297,0,-77.4305	0/1:34:21,13:21:756:13:464:-31.8625,0,-58.1322	0/1:73:29,44:29:1040:44:1568:-119.436,0,-71.9392	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.937	0/1:68:39,29:39:1404:29:1025:-72.0907,0,-106.177	0/1:42:20,22:20:716:22:777:-57.6081,0,-52.1241	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:61:60,1:60:2160:1:36:0,-14.7646,-191.068	0/0:24:24,0:24:856:0:0:0,-7.22472,-77.3602	0/1:41:23,18:23:828:18:640:-45.5871,0,-62.5019	0/1:45:27,18:27:968:18:640:-44.383,0,-73.891	0/1:44:16,28:16:567:28:1000:-77.0701,0,-38.1154	0/1:118:65,53:65:2336:53:1885:-134.253,0,-174.973	0/1:41:13,28:13:464:28:1008:-78.6941,0,-29.7553	0/0:81:81,0:81:2912:0:0:0,-24.3834,-262.315	0/0:46:46,0:46:1656:0:0:0,-13.8474,-149.328
chr11	28083865	.	A	G	108019	PASS	AB=0.52485;ABP=18.2274;AC=142;AF=0.755319;AN=188;AO=5055;CIGAR=1X;DP=6410;DPB=6410;DPRA=0;EPP=10979.8;EPPR=2943.18;GTI=2;LEN=1;MEANALT=1.01064;MQM=59.9636;MQMR=59.8936;NS=94;NUMALT=1;ODDS=3.4272;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=180972;QR=48450;RO=1354;RPL=5055;RPP=10979.8;RPPR=2943.18;RPR=0;RUN=1;SAF=0;SAP=10979.8;SAR=5055;SRF=0;SRP=2943.18;SRR=1354;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:79:1,78:1:36:78:2783:-247.112,-20.1831,0	1/1:45:0,45:0:0:45:1603:-144.56,-13.5464,0	0/1:133:59,73:59:2112:73:2603:-194.432,0,-150.263	0/1:122:59,63:59:2120:63:2260:-166.937,0,-154.337	0/1:40:18,22:18:648:22:792:-59.5645,0,-46.6061	0/1:23:12,11:12:432:11:392:-28.6964,0,-32.2975	1/1:66:0,66:0:0:66:2352:-211.939,-19.868,0	1/1:112:1,111:1:36:111:3968:-353.713,-30.1171,0	0/1:41:21,20:21:744:20:720:-52.7865,0,-54.9421	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	1/1:49:0,49:0:0:49:1751:-157.873,-14.7505,0	1/1:53:0,53:0:0:53:1888:-170.198,-15.9546,0	0/1:48:24,24:24:856:24:856:-62.9117,0,-62.9117	1/1:68:0,68:0:0:68:2440:-219.854,-20.47,0	0/1:32:15,17:15:540:17:612:-45.7805,0,-39.3036	1/1:44:0,44:0:0:44:1575:-142.041,-13.2453,0	0/1:28:10,18:10:360:18:648:-50.2148,0,-24.3155	0/1:28:16,12:16:576:12:432:-30.7924,0,-43.7461	1/1:27:0,27:0:0:27:955:-86.2648,-8.12781,0	0/1:150:54,96:54:1929:96:3439:-264.567,0,-128.73	0/1:94:51,43:51:1824:43:1544:-110.955,0,-136.143	0/1:98:59,39:59:2120:39:1389:-95.7963,0,-161.567	0/1:37:23,14:23:828:14:504:-34.56,0,-63.706	1/1:35:1,34:1:36:34:1224:-106.869,-6.93778,0	1/1:87:0,87:0:0:87:3106:-279.768,-26.1896,0	0/1:192:95,97:95:3378:97:3480:-255.603,0,-246.277	1/1:210:0,210:0:0:210:7523:-677.105,-63.2163,0	0/1:14:6,8:6:216:8:284:-21.6889,0,-15.5761	1/1:196:0,196:0:0:196:7031:-632.85,-59.0019,0	0/1:114:54,60:54:1932:60:2148:-159.27,0,-139.751	1/1:41:1,40:1:36:40:1421:-124.587,-8.74396,0	0/1:18:2,16:2:72:16:576:-46.7564,0,-1.41818	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	0/1:11:2,9:2:72:9:324:-26.1945,0,-3.52539	0/1:25:16,9:16:572:9:324:-21.9801,0,-44.2877	1/1:29:0,29:0:0:29:1044:-94.2748,-8.72987,0	1/1:65:1,64:1:36:64:2295:-203.212,-15.9687,0	1/1:140:0,140:0:0:140:4994:-449.604,-42.1442,0	0/1:37:17,20:17:612:20:712:-53.2685,0,-44.2753	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:143:55,88:55:1972:88:3152:-240.853,0,-134.708	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:146:0,146:0:0:146:5240:-471.728,-43.9504,0	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:22:0,22:0:0:22:784:-70.8839,-6.62266,0	1/1:91:0,91:0:0:91:3260:-293.621,-27.3937,0	0/1:79:36,43:36:1292:43:1540:-115.112,0,-92.8024	1/1:106:0,106:0:0:106:3783:-340.669,-31.9092,0	1/1:81:0,81:0:0:81:2904:-261.595,-24.3834,0	0/1:55:17,38:17:603:38:1364:-106.504,0,-38.0429	1/1:86:0,86:0:0:86:3088:-278.143,-25.8886,0	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	1/1:189:0,189:0:0:189:6775:-609.789,-56.8947,0	1/1:41:0,41:0:0:41:1468:-132.416,-12.3422,0	0/1:13:5,8:5:176:8:288:-22.354,0,-12.2716	1/1:180:0,180:0:0:180:6425:-578.329,-54.1854,0	1/1:18:0,18:0:0:18:648:-58.6519,-5.41854,0	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:15:0,15:0:0:15:521:-47.2163,-4.51545,0	0/1:63:31,32:31:1112:32:1144:-84.2997,0,-81.4265	1/1:104:1,103:1:36:103:3700:-329.603,-27.7088,0	0/1:14:4,10:4:144:10:360:-28.5299,0,-9.0992	0/1:85:44,41:44:1584:41:1472:-107.189,0,-117.264	1/1:114:0,114:0:0:114:4088:-368.105,-34.3174,0	0/1:68:39,29:39:1396:29:1032:-72.7234,0,-105.469	0/1:55:18,37:18:633:37:1319:-102.455,0,-40.7384	1/1:118:0,118:0:0:118:4213:-379.343,-35.5215,0	1/1:163:0,163:0:0:163:5844:-526.071,-49.0679,0	0/1:36:22,14:22:792:14:504:-34.861,0,-60.7686	0/1:61:37,24:37:1324:24:864:-59.7197,0,-100.726	0/1:34:13,21:13:468:21:756:-58.1322,0,-32.2246	0/1:34:21,13:21:733:13:455:-31.0469,0,-56.0546	1/1:172:0,172:0:0:172:6159:-554.407,-51.7772,0	0/1:44:17,27:17:612:27:972:-74.5526,0,-42.1681	1/1:85:0,85:0:0:85:3048:-274.545,-25.5876,0	0/1:85:54,31:54:1940:31:1108:-74.4434,0,-149.289	0/1:126:49,77:49:1760:77:2764:-211.071,0,-120.753	0/1:44:16,28:16:576:28:1000:-77.0701,0,-38.9297	0/1:35:13,22:13:468:22:792:-61.0696,0,-31.9236	0/1:73:44,29:44:1580:29:1034:-71.3976,0,-120.516	1/1:93:0,93:0:0:93:3332:-300.097,-27.9958,0	0/1:69:30,39:30:1072:39:1404:-105.876,0,-76.0214	0/1:43:22,21:22:792:21:752:-55.0616,0,-58.6614	1/1:48:0,48:0:0:48:1724:-155.445,-14.4494,0	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:62:1,61:1:36:61:2175:-192.417,-15.0656,0	1/1:25:0,25:0:0:25:900:-81.3201,-7.52575,0	0/1:41:18,23:18:648:23:810:-60.8768,0,-46.3097	0/1:44:17,27:17:612:27:968:-74.192,0,-42.1681	0/1:45:29,16:29:1040:16:572:-38.2671,0,-80.368	0/1:121:54,67:54:1914:67:2400:-179.828,0,-135.918	0/1:42:29,13:29:1012:13:464:-29.4542,0,-78.7453	1/1:81:0,81:0:0:81:2899:-261.145,-24.3834,0	1/1:48:0,48:0:0:48:1724:-155.445,-14.4494,0
chr11	28125053	.	A	T	323252	PASS	AB=0.53964;ABP=95.6304;AC=142;AF=0.755319;AN=188;AO=11952;CIGAR=1X;DP=15151;DPB=15151;DPRA=0;EPP=25956.4;EPPR=6949.55;GTI=2;LEN=1;MEANALT=1;MQM=59.9976;MQMR=60;NS=94;NUMALT=1;ODDS=7.79996;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=427870;QR=114441;RO=3199;RPL=7270;RPP=1219.87;RPPR=3.20647;RPR=4682;RUN=1;SAF=4682;SAP=1219.87;SAR=7270;SRF=1591;SRP=3.20647;SRR=1608;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:62:0,62:0:0:62:2228:-200.784,-18.6639,0	1/1:243:1,242:1:21:242:8692:-780.168,-71.0503,0	0/1:208:92,116:92:3308:116:4152:-311.249,0,-235.323	0/1:329:161,168:161:5768:168:6024:-443.188,0,-420.196	0/1:63:23,40:23:824:40:1436:-110.573,0,-55.5184	0/1:23:17,6:17:608:6:216:-12.8668,0,-48.1283	1/1:188:2,186:2:72:186:6664:-593,-49.7569,0	1/1:213:3,210:3:108:210:7513:-666.135,-54.0442,0	0/1:116:60,56:60:2140:56:2012:-146.434,0,-157.949	1/1:209:2,207:2:57:207:7409:-661.441,-57.502,0	1/1:120:0,120:0:0:120:4281:-385.467,-36.1236,0	1/1:129:1,128:1:36:128:4570:-407.865,-35.2346,0	0/1:137:64,73:64:2300:73:2600:-193.006,0,-166.02	1/1:164:3,161:3:108:161:5769:-509.247,-39.2938,0	0/1:150:60,90:60:2160:90:3216:-244.506,0,-149.512	1/1:130:0,130:0:0:130:4672:-420.639,-39.1339,0	0/1:95:46,49:46:1644:49:1756:-129.726,0,-119.651	0/1:91:40,51:40:1432:51:1832:-137.767,0,-101.784	1/1:74:5,69:5:180:69:2464:-205.462,-5.72416,0	0/1:286:119,167:119:4264:167:5957:-450.144,0,-297.843	0/1:233:84,149:84:3012:149:5336:-410.233,0,-201.171	0/1:116:68,48:68:2428:48:1716:-119.806,0,-183.857	0/1:146:62,84:62:2224:84:2999:-226.186,0,-156.474	1/1:184:13,171:13:464:171:6121:-508.891,-13.292,0	1/1:120:0,120:0:0:120:4282:-385.555,-36.1236,0	0/1:373:167,206:167:5972:206:7373:-551.332,0,-425.303	1/1:341:2,339:2:72:339:12156:-1087.04,-95.8145,0	0/1:64:30,34:30:1076:34:1224:-91.2011,0,-77.8869	1/1:456:3,453:3:93:453:16223:-1451.06,-128.593,0	0/1:180:86,94:86:3092:94:3364:-248.791,0,-224.321	1/1:196:3,193:3:108:193:6904:-611.353,-48.9267,0	0/1:10:6,4:6:212:4:144:-10.3033,0,-16.4145	1/1:19:0,19:0:0:19:680:-61.5292,-5.71957,0	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	1/1:13:0,13:0:0:13:460:-41.7354,-3.91339,0	1/1:336:2,334:2:72:334:12004:-1073.37,-94.3094,0	1/1:333:2,331:2:72:331:11868:-1061.14,-93.4063,0	0/1:86:43,43:43:1548:43:1540:-113.004,0,-113.724	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	0/1:252:130,122:130:4657:122:4357:-316.444,0,-343.43	1/1:53:1,52:1:36:52:1868:-164.801,-12.3563,0	1/1:237:0,237:0:0:237:8451:-760.591,-71.3441,0	1/1:118:4,114:4:144:114:4092:-355.151,-22.2079,0	1/1:117:1,116:1:36:116:4156:-370.624,-31.6222,0	1/1:144:0,144:0:0:144:5118:-460.763,-43.3483,0	0/1:169:74,95:74:2644:95:3373:-252.912,0,-187.333	1/1:297:1,296:1:36:296:10617:-951.838,-85.8076,0	1/1:186:0,186:0:0:186:6645:-598.128,-55.9916,0	0/1:238:100,138:100:3561:138:4925:-371.755,0,-249.053	1/1:289:0,289:0:0:289:10352:-931.601,-86.9977,0	1/1:5:0,5:0:0:5:176:-16.185,-1.50515,0	1/1:272:1,271:1:36:271:9713:-870.517,-78.2819,0	1/1:130:0,130:0:0:130:4649:-418.571,-39.1339,0	0/1:8:1,7:1:36:7:252:-20.6207,0,-1.19003	1/1:289:0,289:0:0:289:10337:-930.252,-86.9977,0	1/1:42:0,42:0:0:42:1508:-136.015,-12.6433,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	0/1:144:57,87:57:2052:87:3108:-236.599,0,-141.603	1/1:211:2,209:2:72:209:7463:-664.874,-56.6806,0	0/1:7:6,1:6:212:1:32:-1.0921,0,-17.3176	0/1:355:147,208:147:5257:208:7464:-564.936,0,-366.4	1/1:289:4,285:4:144:285:10209:-905.422,-73.6841,0	0/1:138:63,75:63:2260:75:2668:-198.822,0,-162.12	0/1:138:66,72:66:2352:72:2568:-189.828,0,-170.397	1/1:269:1,268:1:36:268:9584:-858.918,-77.3788,0	1/1:305:3,302:3:108:302:10833:-964.792,-81.739,0	0/1:44:24,20:24:860:20:720:-51.8835,0,-64.4765	0/1:62:31,31:31:1116:31:1108:-81.3671,0,-82.0878	0/1:182:83,99:83:2984:99:3560:-265.819,0,-214.004	0/1:24:15,9:15:532:9:324:-22.2811,0,-40.9884	1/1:96:0,96:0:0:96:3418:-307.832,-28.8989,0	0/1:155:73,82:73:2612:82:2936:-217.815,0,-188.668	1/1:224:6,218:6:212:218:7828:-685.12,-48.0059,0	0/1:342:171,171:171:6124:171:6132:-449.026,0,-448.308	0/1:220:79,141:79:2805:141:5052:-388.598,0,-186.463	0/1:208:102,106:102:3625:106:3800:-279.583,0,-263.842	0/1:19:10,9:10:341:9:316:-23.0593,0,-25.2982	0/1:192:98,94:98:3520:94:3372:-245.898,0,-259.211	1/1:217:2,215:2:72:215:7655:-682.149,-58.4868,0	0/1:339:142,197:142:5070:197:7029:-530.624,0,-354.393	0/1:142:68,74:68:2421:74:2652:-196.18,0,-175.398	1/1:153:0,153:0:0:153:5468:-492.249,-46.0576,0	1/1:122:1,121:1:36:121:4340:-387.176,-33.1274,0	1/1:218:4,214:4:144:214:7679:-677.829,-52.3109,0	1/1:53:0,53:0:0:53:1889:-170.286,-15.9546,0	0/1:143:63,80:63:2256:80:2876:-216.029,0,-160.256	0/1:141:62,79:62:2224:79:2832:-212.673,0,-157.979	0/1:112:56,56:56:2004:56:2008:-147.278,0,-146.918	0/1:174:89,85:89:3169:85:3025:-220.101,0,-233.055	0/1:114:81,33:81:2908:33:1184:-72.5509,0,-227.638	1/1:269:1,268:1:36:268:9600:-860.355,-77.3788,0	1/1:189:1,188:1:36:188:6748:-603.793,-53.2964,0
chr11	28585909	.	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chr11	28706014	.	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chr11	28759068	.	G	A	33487.1	PASS	AB=0.484656;ABP=10.7403;AC=48;AF=0.255319;AN=188;AO=1841;CIGAR=1X;DP=7652;DPB=7652;DPRA=1.04496;EPP=3194.79;EPPR=10019.5;GTI=2;LEN=1;MEANALT=1.03846;MQM=59.9522;MQMR=59.9821;NS=94;NUMALT=1;ODDS=3.0028;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65431;QR=206436;RO=5808;RPL=1743;RPP=3194.79;RPPR=10027.3;RPR=98;RUN=1;SAF=0;SAP=4000.69;SAR=1841;SRF=1;SRP=12606.2;SRR=5807;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:57:57,0:57:2010:0:0:0,-17.1587,-181.172	0/0:77:77,0:77:2713:0:0:0,-23.1793,-244.328	0/1:185:114,71:114:4028:71:2519:-171.272,0,-307.02	0/1:220:121,99:121:4295:99:3505:-249.435,0,-320.504	0/1:70:41,29:41:1459:29:1023:-71.3096,0,-110.533	0/1:15:12,3:12:428:3:104:-5.18736,0,-34.3434	0/0:56:56,0:56:1987:0:0:0,-16.8577,-179.104	0/0:106:106,0:106:3787:0:0:0,-31.9092,-341.029	0/1:69:31,38:31:1108:38:1359:-101.824,0,-79.2599	0/0:57:57,0:57:2028:0:0:0,-17.1587,-182.793	0/1:47:23,24:23:820:24:864:-63.9342,0,-59.9741	0/0:93:93,0:93:3293:0:0:0,-27.9958,-296.588	0/1:49:27,22:27:959:22:788:-56.4928,0,-71.8749	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/0:48:48,0:48:1711:0:0:0,-14.4494,-154.275	0/0:62:62,0:62:2183:0:0:0,-18.6639,-196.734	0/1:28:13,15:13:468:15:532:-39.7842,0,-34.0308	0/1:31:12,19:12:415:19:676:-51.8361,0,-28.3484	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.27	0/0:168:167,1:167:5933:1:36:0,-46.9748,-530.484	0/1:125:78,47:78:2771:47:1658:-111.878,0,-212.003	0/0:115:115,0:115:4107:0:0:0,-34.6184,-369.815	0/1:49:23,26:23:820:26:921:-68.4547,0,-59.372	0/0:56:56,0:56:1995:0:0:0,-16.8577,-179.823	0/0:108:108,0:108:3854:0:0:0,-32.5112,-347.055	0/1:181:103,78:103:3661:78:2760:-194.149,0,-275.208	0/1:234:113,121:113:4035:121:4316:-318.176,0,-292.897	0/1:23:14,9:14:500:9:324:-22.5822,0,-38.4125	0/1:256:110,146:110:3898:146:5192:-390.357,0,-273.953	0/1:83:47,36:47:1680:36:1284:-90.8774,0,-126.502	0/0:71:71,0:71:2527:0:0:0,-21.3731,-227.682	0/1:5:2,3:2:72:3:100:-7.82529,0,-5.33157	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:5:1,4:1:36:4:144:-11.8085,0,-2.09312	0/1:10:6,4:6:203:4:144:-10.3033,0,-15.5909	0/0:18:18,0:18:632:0:0:0,-5.41854,-57.2068	0/0:145:145,0:145:5169:0:0:0,-43.6493,-465.351	0/0:71:71,0:71:2508:0:0:0,-21.3731,-225.971	0/1:50:21,29:21:743:29:1022:-77.2394,0,-52.1418	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/1:103:58,45:58:2051:45:1607:-113.914,0,-153.853	0/0:29:28,1:28:1004:1:36:0,-5.13159,-87.0776	0/0:172:172,0:172:6131:0:0:0,-51.7772,-551.893	0/0:47:47,0:47:1672:0:0:0,-14.1484,-150.767	0/0:40:40,0:40:1423:0:0:0,-12.0412,-128.367	0/0:97:97,0:97:3450:0:0:0,-29.1999,-310.713	0/1:115:52,63:52:1850:63:2244:-167.605,0,-132.16	0/0:162:162,0:162:5757:0:0:0,-48.7669,-517.692	0/0:90:90,0:90:3199:0:0:0,-27.0927,-288.134	0/1:126:60,66:60:2139:66:2368:-175.448,0,-154.848	0/0:110:110,0:110:3905:0:0:0,-33.1133,-351.621	0/0:9:9,0:9:315:0:0:0,-2.70927,-28.6872	0/0:129:129,0:129:4596:0:0:0,-38.8329,-413.804	0/0:61:61,0:61:2163:0:0:0,-18.3628,-194.937	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/0:214:214,0:214:7655:0:0:0,-64.4204,-688.986	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/1:59:34,25:34:1186:25:883:-62.0267,0,-89.2825	0/0:79:78,1:78:2769:1:36:0,-20.1831,-245.852	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/1:220:100,119:100:3533:119:4188:-310.749,0,-251.896	0/0:137:137,0:137:4881:0:0:0,-41.2411,-439.443	0/1:44:22,22:22:788:22:792:-58.3604,0,-57.9995	0/1:130:65,65:65:2328:65:2294:-167.587,0,-170.646	0/0:146:146,0:146:5198:0:0:0,-43.9504,-467.961	0/0:172:171,1:171:6052:1:36:0,-48.1789,-541.191	0/1:23:12,11:12:432:11:381:-27.6969,0,-32.2975	0/1:43:23,20:23:796:20:695:-49.9248,0,-59.0107	0/1:31:19,12:19:663:12:432:-29.8893,0,-50.6615	0/1:15:11,4:11:384:4:144:-8.79817,0,-30.3792	0/0:84:83,1:83:2941:1:36:0,-21.6882,-261.326	0/1:86:46,40:46:1627:40:1420:-102.209,0,-120.83	0/0:77:77,0:77:2751:0:0:0,-23.1793,-247.832	0/1:204:104,100:104:3702:100:3572:-260.278,0,-271.973	0/1:30:21,9:21:743:9:324:-20.475,0,-58.1624	0/0:66:66,0:66:2364:0:0:0,-19.868,-213.018	0/1:11:5,6:5:180:6:216:-16.4792,0,-13.2407	0/1:129:60,67:60:2144:67:2388:-176.587,0,-154.637	0/0:129:129,0:129:4547:0:0:0,-38.8329,-409.211	0/1:227:125,102:125:4435:102:3619:-257.582,0,-330.991	0/1:34:22,12:22:784:12:432:-28.9862,0,-60.6489	0/1:55:24,31:24:860:31:1103:-83.0232,0,-61.1652	0/0:38:38,0:38:1352:0:0:0,-11.4391,-121.98	0/0:106:106,0:106:3749:0:0:0,-31.9092,-337.61	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:70:28,42:28:968:42:1508:-114.873,0,-66.3566	0/1:81:47,34:47:1676:34:1207:-84.5518,0,-126.744	0/1:34:14,20:14:504:20:711:-54.0806,0,-35.4631	0/1:91:44,47:44:1580:47:1668:-123.012,0,-115.098	0/1:67:27,40:27:956:40:1424:-108.288,0,-66.1867	0/0:103:103,0:103:3672:0:0:0,-31.0061,-330.685	0/0:82:82,0:82:2901:0:0:0,-24.6845,-261.323
chr11	28944004	.	G	A	342573	PASS	AB=0.627655;ABP=735.928;AC=149;AF=0.792553;AN=188;AO=15513;CIGAR=1X;DP=17519;DPB=17519;DPRA=0;EPP=33083.8;EPPR=4122.84;GTI=4;LEN=1;MEANALT=1.09574;MQM=59.9816;MQMR=59.995;NS=94;NUMALT=1;ODDS=16.7546;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=553655;QR=70478;RO=1996;RPL=70;RPP=33083.8;RPPR=4122.84;RPR=15443;RUN=1;SAF=0;SAP=33689.1;SAR=15513;SRF=0;SRP=4337.27;SRR=1996;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:42:0,42:0:0:42:1504:-135.655,-12.6433,0	1/1:86:0,86:0:0:86:3083:-277.697,-25.8886,0	0/1:114:46,68:46:1608:68:2439:-185.447,0,-110.686	0/1:216:96,120:96:3381:120:4255:-318.107,0,-239.483	0/1:29:9,20:9:324:20:720:-56.3989,0,-20.776	0/1:46:21,25:21:743:25:884:-66.0063,0,-53.346	1/1:126:0,126:0:0:126:4511:-406.157,-37.9298,0	1/1:130:0,130:0:0:130:4635:-417.313,-39.1339,0	0/1:127:45,82:45:1588:82:2932:-225.884,0,-104.977	1/1:99:0,99:0:0:99:3536:-318.45,-29.802,0	0/1:219:37,182:37:1285:182:6493:-518.53,0,-50.0204	1/1:93:0,93:0:0:93:3296:-296.859,-27.9958,0	0/1:94:58,35:58:2043:35:1252:-84.6295,0,-155.784	1/1:72:0,72:0:0:72:2556:-230.29,-21.6742,0	1/1:60:0,60:0:0:60:2114:-190.526,-18.0618,0	1/1:86:2,84:2:72:84:2992:-262.674,-19.0519,0	0/1:39:17,22:17:608:22:792:-59.8655,0,-43.3119	0/1:45:28,17:28:988:17:600:-40.7828,0,-75.6876	1/1:237:0,237:0:0:237:8417:-757.536,-71.3441,0	1/1:123:0,123:0:0:123:4393:-395.542,-37.0267,0	0/1:147:77,70:77:2699:70:2491:-180.192,0,-198.9	1/1:108:0,108:0:0:108:3836:-345.436,-32.5112,0	0/1:152:61,91:61:2173:91:3230:-245.165,0,-150.078	0/1:85:8,77:8:288:77:2746:-221.794,0,-0.679857	1/1:94:0,94:0:0:94:3347:-301.448,-28.2968,0	0/1:226:105,121:105:3711:121:4276:-316.985,0,-266.16	0/1:221:90,131:90:3178:131:4696:-356.271,0,-219.716	0/1:43:27,16:27:923:16:576:-39.2307,0,-70.4335	0/1:296:117,179:117:4155:179:6397:-486.713,0,-285.028	0/1:145:57,88:57:2022:88:3164:-241.334,0,-138.602	1/1:86:1,85:1:36:85:3041:-270.319,-22.2903,0	1/1:434:8,426:8:284:426:15218:-1343.43,-104.744,0	1/1:1092:1,1091:1:32:1091:38996:-3505.1,-325.525,0	1/1:409:10,399:10:347:399:14226:-1248.49,-91.5577,0	1/1:773:1,771:1:36:771:27576:-2477.43,-229.157,0	1/1:1156:2,1154:2:68:1154:41243:-3704,-341.533,0	1/1:186:0,186:0:0:186:6632:-596.96,-55.9916,0	1/1:162:0,162:0:0:162:5788:-521.028,-48.7669,0	0/1:211:51,160:51:1796:160:5686:-448.34,0,-98.4021	1/1:585:1,583:1:36:583:20812:-1868.91,-172.488,0	0/1:82:42,40:42:1495:40:1440:-105.213,0,-110.159	1/1:176:0,176:0:0:176:6292:-566.373,-52.9813,0	1/1:166:0,166:0:0:166:5932:-533.987,-49.971,0	1/1:35:0,35:0:0:35:1245:-112.353,-10.5361,0	1/1:69:0,69:0:0:69:2452:-220.933,-20.7711,0	1/1:147:0,147:0:0:147:5266:-474.074,-44.2514,0	0/1:102:48,54:48:1680:54:1928:-143.09,0,-120.778	1/1:159:0,159:0:0:159:5679:-511.228,-47.8638,0	1/1:104:1,103:1:36:103:3664:-326.365,-27.7088,0	0/1:96:47,49:47:1676:49:1752:-129.065,0,-122.228	1/1:137:0,137:0:0:137:4892:-440.431,-41.2411,0	1/1:1176:0,1174:0:0:1174:42006:-3778.82,-353.409,0	1/1:107:0,107:0:0:107:3836:-345.436,-32.2102,0	1/1:62:0,62:0:0:62:2201:-198.354,-18.6639,0	1/1:305:9,296:9:324:296:10616:-925.84,-62.3083,0	1/1:103:0,103:0:0:103:3681:-331.492,-31.0061,0	1/1:63:0,63:0:0:63:2268:-204.382,-18.9649,0	1/1:446:7,438:7:252:438:15623:-1382.75,-111.158,0	1/1:493:0,493:0:0:493:17585:-1582.27,-148.408,0	0/1:101:48,53:48:1712:53:1896:-140.514,0,-123.962	1/1:66:2,64:2:63:64:2281:-199.567,-13.8848,0	1/1:346:6,340:6:207:340:12111:-1070.82,-85.1895,0	0/1:111:77,33:77:2706:33:1170:-72.1341,0,-210.307	1/1:175:2,173:2:72:173:6173:-548.83,-45.8435,0	0/1:46:25,21:25:888:21:756:-54.5117,0,-66.3916	0/1:57:30,27:30:1068:27:972:-70.6392,0,-79.2734	1/1:143:0,143:0:0:143:5102:-459.321,-43.0473,0	1/1:107:0,107:0:0:107:3848:-346.514,-32.2102,0	0/1:269:33,236:33:1171:236:8399:-674.941,0,-24.7196	0/1:66:22,44:22:788:44:1576:-122.264,0,-51.3768	0/1:53:38,15:38:1356:15:532:-32.2585,0,-106.386	1/1:255:11,244:11:392:244:8697:-747.103,-41.1426,0	1/1:111:0,111:0:0:111:3967:-357.221,-33.4143,0	0/1:78:45,32:45:1583:32:1141:-79.4503,0,-119.221	1/1:198:0,198:0:0:198:7040:-633.641,-59.6039,0	1/1:136:2,134:2:59:134:4795:-426.101,-35.3359,0	0/1:75:37,38:37:1324:38:1368:-100.844,0,-96.8848	1/1:46:0,46:0:0:46:1652:-148.968,-13.8474,0	1/1:443:6,437:6:216:437:15572:-1381.39,-113.566,0	0/1:82:27,54:27:955:54:1919:-148.243,0,-61.5218	1/1:80:0,80:0:0:80:2868:-258.357,-24.0824,0	0/1:192:85,107:85:2967:107:3831:-287.188,0,-209.464	0/1:60:34,26:34:1207:26:927:-65.6856,0,-90.8597	0/1:71:39,32:39:1361:32:1141:-81.625,0,-101.413	1/1:48:0,48:0:0:48:1707:-153.915,-14.4494,0	1/1:116:1,115:1:36:115:4093:-364.958,-31.3212,0	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	0/1:93:53,40:53:1856:40:1431:-101.091,0,-139.319	0/1:101:50,51:50:1780:51:1819:-133.587,0,-130.079	0/1:327:40,287:40:1432:287:10185:-818.146,0,-30.7408	0/1:535:65,469:65:2287:469:16572:-1330.05,0,-44.9799	0/1:126:88,38:88:3105:38:1364:-85.1309,0,-241.749	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:63:0,63:0:0:63:2255:-203.212,-18.9649,0
chr11	28962378	.	G	A	29700.3	PASS	AB=0.529749;ABP=28.4626;AC=48;AF=0.255319;AN=188;AO=1761;CIGAR=1X;DP=6940;DPB=6940;DPRA=0.929634;EPP=3826.97;EPPR=11242.6;GTI=0;LEN=1;MEANALT=1;MQM=53.6485;MQMR=59.9187;NS=94;NUMALT=1;ODDS=0.90823;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=62754;QR=183954;RO=5176;RPL=1;RPP=3818.29;RPPR=11242.6;RPR=1760;RUN=1;SAF=1;SAP=3818.29;SAR=1760;SRF=0;SRP=11242.6;SRR=5176;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:50:50,0:50:1759:0:0:0,-15.0515,-158.59	0/0:59:59,0:59:2104:0:0:0,-17.7608,-189.63	0/1:76:24,52:24:855:52:1850:-142.985,0,-54.3919	0/1:174:108,66:108:3848:66:2360:-159.707,0,-293.509	0/1:59:23,36:23:828:36:1292:-98.6528,0,-57.0833	0/1:29:9,20:9:320:20:720:-55.9798,0,-20.4125	0/0:78:78,0:78:2768:0:0:0,-23.4803,-249.36	0/0:84:83,1:83:2954:1:36:0,-21.6973,-262.504	0/1:95:35,60:35:1251:60:2152:-164.634,0,-84.2964	0/0:86:86,0:86:3088:0:0:0,-25.8886,-278.018	0/1:43:24,19:24:860:19:678:-47.5007,0,-64.7775	0/0:97:97,0:97:3413:0:0:0,-29.1999,-307.385	0/1:80:44,36:44:1561:36:1292:-92.0026,0,-116.697	0/0:39:39,0:39:1387:0:0:0,-11.7402,-125.128	0/0:79:79,0:79:2785:0:0:0,-23.7814,-250.889	0/0:59:59,0:59:2076:0:0:0,-17.7608,-187.106	0/1:17:5,12:5:180:12:416:-32.4852,0,-11.4346	0/1:30:13,17:13:468:17:612:-46.0876,0,-33.4205	0/0:32:32,0:32:1144:0:0:0,-9.63296,-103.261	0/0:303:303,0:303:10774:0:0:0,-91.2121,-969.522	0/1:140:57,83:57:2019:83:2944:-221.98,0,-139.838	0/0:107:107,0:107:3818:0:0:0,-32.2102,-343.817	0/1:95:26,69:26:918:69:2459:-192.595,0,-54.3374	0/1:38:31,7:31:1112:7:247:-10.9324,0,-88.9522	0/0:69:68,1:68:2407:1:27:0,-18.0713,-214.185	0/1:199:86,113:86:3073:113:4010:-300.81,0,-216.892	0/1:190:85,105:85:3037:105:3732:-276.958,0,-216.363	0/1:32:19,13:19:680:13:468:-32.7665,0,-51.8916	0/1:180:87,93:87:3091:93:3321:-244.416,0,-224.231	0/1:94:53,41:53:1892:41:1445:-101.374,0,-142.261	0/0:69:68,1:68:2416:1:36:0,-17.1754,-214.094	0/1:14:5,9:5:180:9:324:-25.2496,0,-12.3376	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:10:6,4:6:216:4:144:-10.0833,0,-16.7802	0/1:10:4,6:4:144:6:216:-16.7248,0,-10.3033	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.5748	0/0:187:186,0:186:6595:0:0:0,-55.9916,-593.269	0/0:97:97,0:97:3475:0:0:0,-29.1999,-312.961	0/1:41:19,22:19:684:22:784:-58.3715,0,-49.5481	0/0:6:6,0:6:203:0:0:0,-1.80618,-18.6012	0/1:140:62,78:62:2200:78:2785:-207.474,0,-156.119	0/0:38:38,0:38:1345:0:0:0,-11.4391,-120.41	0/0:94:94,0:94:3310:0:0:0,-28.2968,-298.118	0/0:56:56,0:56:1991:0:0:0,-16.8577,-178.835	0/0:53:53,0:53:1881:0:0:0,-15.9546,-169.481	0/0:119:119,0:119:4213:0:0:0,-35.8226,-379.351	0/1:86:31,55:31:1116:55:1963:-149.412,0,-74.8631	0/0:127:126,1:126:4491:1:36:0,-34.6351,-400.137	0/0:68:68,0:68:2431:0:0:0,-20.47,-219.045	0/1:62:33,29:33:1169:29:1040:-74.2601,0,-86.8514	0/0:46:46,0:46:1621:0:0:0,-13.8474,-146.177	0/1:4:3,1:3:108:1:36:-2.39156,0,-8.87105	0/0:107:107,0:107:3789:0:0:0,-32.2102,-341.202	0/0:48:48,0:48:1705:0:0:0,-14.4494,-153.732	0/1:13:6,7:6:212:7:239:-17.7314,0,-15.5114	0/0:116:116,0:116:4107:0:0:0,-34.9195,-369.794	0/0:31:31,0:31:1112:0:0:0,-9.33193,-100.391	0/1:12:8,4:8:288:4:144:-9.69754,0,-22.655	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:58:30,28:30:1072:28:1004:-72.9538,0,-79.3327	0/0:92:92,0:92:3280:0:0:0,-27.6948,-295.421	0/1:5:3,2:3:108:2:72:-5.32664,0,-8.57002	0/1:180:73,107:73:2608:107:3801:-286.183,0,-180.783	0/0:108:107,1:107:3816:1:36:0,-28.9156,-340.04	0/1:29:22,7:22:792:7:252:-14.2628,0,-62.8712	0/1:59:23,36:23:824:36:1283:-97.8727,0,-56.7225	0/0:118:118,0:118:4203:0:0:0,-35.5215,-378.453	0/0:98:97,0:97:3455:0:0:0,-29.1999,-310.804	0/1:27:19,8:19:684:8:287:-17.7819,0,-53.7625	0/1:38:16,22:16:567:22:779:-58.8194,0,-39.9216	0/1:44:17,27:17:604:27:968:-74.0561,0,-41.4453	0/1:29:13,16:13:468:16:564:-42.25,0,-33.7298	0/0:111:111,0:111:3948:0:0:0,-33.4143,-355.503	0/1:88:46,42:46:1644:42:1508:-109.169,0,-121.747	0/0:86:86,0:86:3056:0:0:0,-25.8886,-274.491	0/0:84:84,0:84:3004:0:0:0,-25.2865,-270.535	0/1:112:47,65:47:1675:65:2324:-174.805,0,-117.321	0/0:44:43,1:43:1519:1:36:0,-9.65609,-133.413	0/1:6:2,4:2:72:4:144:-11.3736,0,-5.03054	0/1:82:42,40:42:1499:40:1427:-103.215,0,-110.519	0/0:59:59,0:59:2064:0:0:0,-17.7608,-186.027	0/1:116:66,50:66:2355:50:1781:-124.745,0,-177.289	0/1:51:28,23:28:1000:23:807:-57.4076,0,-74.9628	0/1:79:43,36:43:1496:36:1288:-92.3607,0,-110.125	0/0:42:42,0:42:1486:0:0:0,-12.6433,-134.033	0/0:125:124,1:124:4399:1:36:0,-34.0331,-392.298	0/0:29:28,0:28:991:0:0:0,-8.42884,-89.1439	0/1:74:31,43:31:1097:43:1535:-114.673,0,-76.7618	0/1:67:35,32:35:1213:32:1135:-82.0113,0,-89.2992	0/1:26:15,11:15:540:11:396:-28.1049,0,-41.1098	0/1:96:52,44:52:1810:44:1564:-110.886,0,-134.274	0/1:82:28,54:28:1000:54:1919:-147.913,0,-65.6309	0/0:105:105,0:105:3741:0:0:0,-31.6081,-336.89	0/0:100:100,0:100:3532:0:0:0,-30.103,-318.088
chr11	28962396	.	TTCA	CTCA,CTCG	149817	PASS	AB=0.458841,0.537593;ABP=52.5244,44.316;AC=140,48;AF=0.744681,0.255319;AN=188;AO=5133,1815;CIGAR=1X3M,1X2M1X;DP=6976;DPB=6976;DPRA=0,0.949059;EPP=11053.8,3900.92;EPPR=0;GTI=0;LEN=1,4;MEANALT=1.82979,2.22222;MQM=59.9421,53.524;MQMR=0;NS=94;NUMALT=2;ODDS=2.34747;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=183451,63947;QR=0;RO=0;RPL=5122,1811;RPP=11053.8,3909.57;RPPR=0;RPR=11,4;RUN=1,1;SAF=0,1;SAP=11149.2,3935.55;SAR=5133,1814;SRF=0;SRP=0;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:50:0,50,0:0:0:50,0:1785,0:-160.931,-15.0515,0,-160.931,-15.0515,-160.931	1/1:60:0,59,0:0:0:59,0:2112,0:-190.117,-17.7608,0,-190.117,-17.7608,-190.117	1/2:82:0,24,58:0:0:24,58:864,2031:-234.558,-164.056,-156.831,-70.8578,0,-53.3981	1/2:176:0,106,70:0:0:106,70:3800,2484:-512.043,-202.198,-170.289,-310.2,0,-289.128	1/2:60:0,23,37:0:0:23,37:828,1320:-175.358,-107.796,-100.873,-67.9204,0,-56.7823	1/2:30:0,9,21:0:0:9,21:324,719:-84.9615,-58.5191,-55.8099,-26.7966,0,-20.475	1/1:75:0,75,0:0:0:75,0:2692,0:-242.524,-22.5773,0,-242.524,-22.5773,-242.524	1/1:84:0,83,1:0:0:83,1:2961,36:-266.363,-24.9855,0,-263.434,-21.6973,-263.133	1/2:99:0,34,64:0:0:34,64:1216,2268:-283.14,-183.985,-173.75,-99.1518,0,-79.8859	1/1:89:0,89,0:0:0:89,0:3154,0:-284.025,-26.7917,0,-284.025,-26.7917,-284.025	1/2:44:0,26,18:0:0:26,18:936,637:-128.131,-51.7535,-43.9268,-76.7323,0,-71.3137	1/1:97:0,97,0:0:0:97,0:3441,0:-309.901,-29.1999,0,-309.901,-29.1999,-309.901	1/2:80:0,42,37:0:0:42,37:1492,1302:-227.184,-105.604,-92.961,-121.679,0,-110.541	1/1:36:0,36,0:0:0:36,0:1292,0:-116.584,-10.8371,0,-116.584,-10.8371,-116.584	1/1:78:0,78,0:0:0:78,0:2796,0:-251.88,-23.4803,0,-251.88,-23.4803,-251.88	1/1:59:0,59,0:0:0:59,0:2096,0:-188.906,-17.7608,0,-188.906,-17.7608,-188.906	1/2:17:0,5,12:0:0:5,12:176,431:-49.5593,-35.2326,-33.7275,-14.6799,0,-11.0675	1/2:30:0,13,17:0:0:13,17:464,600:-86.8173,-48.9958,-45.0824,-38.1759,0,-33.0584	1/1:31:0,31,0:0:0:31,0:1112,0:-100.383,-9.33193,0,-100.383,-9.33193,-100.383	1/1:305:0,300,0:0:0:300,0:10702,0:-962.751,-90.309,0,-962.751,-90.309,-962.751	1/2:139:0,56,83:0:0:56,83:2012,2943:-403.336,-239.197,-222.34,-164.495,0,-139.51	1/1:107:0,107,0:0:0:107,0:3848,0:-346.514,-32.2102,0,-346.514,-32.2102,-346.514	1/2:96:0,26,70:0:0:26,70:932,2442:-274.589,-198.573,-190.746,-76.3721,0,-55.3	1/2:39:0,31,8:0:0:31,8:1107,275:-112.657,-22.3922,-13.0603,-90.6082,0,-88.2	1/1:72:0,72,0:0:0:72,0:2584,0:-232.807,-21.6742,0,-232.807,-21.6742,-232.807	1/2:199:0,86,113:0:0:86,113:3065,4013:-576.839,-327.005,-301.117,-250.189,0,-216.173	1/2:194:0,87,107:0:0:87,107:3094,3789:-559.443,-307.302,-281.112,-252.496,0,-220.285	1/2:33:0,19,14:0:0:19,14:684,498:-96.6347,-40.8254,-35.1058,-56.1661,0,-51.9517	1/2:179:0,84,95:0:0:84,95:3004,3323:-515.166,-270.215,-244.928,-245.305,0,-216.707	1/2:96:0,52,41:0:0:52,41:1855,1433:-267.282,-116.057,-100.404,-151.249,0,-138.907	1/1:69:0,67,1:0:0:67,1:2408,36:-216.675,-20.169,0,-213.74,-17.1741,-213.439	1/2:13:0,4,9:0:0:4,9:144,317:-37.8751,-26.1229,-24.9188,-12.1095,0,-9.40023	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/2:11:0,6,5:0:0:6,5:216,176:-32.0739,-14.4422,-12.636,-17.9843,0,-16.4792	1/2:10:0,4,6:0:0:4,6:144,212:-29.3209,-17.5682,-16.364,-12.1095,0,-10.3033	1/1:15:0,15,0:0:0:15,0:536,0:-48.5748,-4.51545,0,-48.5748,-4.51545,-48.5748	1/1:184:0,183,0:0:0:183,0:6553,0:-589.489,-55.0885,0,-589.489,-55.0885,-589.489	1/1:97:0,97,0:0:0:97,0:3487,0:-314.04,-29.1999,0,-314.04,-29.1999,-314.04	1/2:43:0,17,25:0:0:17,25:612,881:-121.297,-71.3574,-66.2399,-49.9361,0,-42.4103	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/2:141:0,62,79:0:0:62,79:2220,2785:-407.089,-226.044,-207.38,-181.401,0,-157.619	1/1:37:0,37,0:0:0:37,0:1322,0:-119.01,-11.1381,0,-119.01,-11.1381,-119.01	1/1:92:0,91,0:0:0:91,0:3268,0:-294.088,-27.3937,0,-294.088,-27.3937,-294.088	1/1:55:0,54,0:0:0:54,0:1925,0:-173.317,-16.2556,0,-173.317,-16.2556,-173.317	1/1:55:0,55,0:0:0:55,0:1946,0:-175.409,-16.5567,0,-175.409,-16.5567,-175.409	1/1:122:0,121,0:0:0:121,0:4325,0:-389.062,-36.4246,0,-389.062,-36.4246,-389.062	1/2:88:0,31,57:0:0:31,57:1112,2005:-252.661,-161.956,-152.624,-91.0594,0,-73.9007	1/1:126:0,125,1:0:0:125,1:4459,36:-400.849,-37.6288,0,-397.914,-34.3341,-397.613	1/1:66:0,66,0:0:0:66,0:2342,0:-211.036,-19.868,0,-211.036,-19.868,-211.036	1/2:62:0,33,29:0:0:33,29:1180,1033:-179.847,-83.6279,-73.6939,-96.5741,0,-87.8442	1/1:46:0,46,0:0:0:46,0:1656,0:-149.328,-13.8474,0,-149.328,-13.8474,-149.328	1/2:4:0,3,1:0:0:3,1:108,36:-12.1071,-3.29465,-2.39156,-9.17208,0,-8.87105	1/1:104:0,103,0:0:0:103,0:3704,0:-333.246,-31.0061,0,-333.246,-31.0061,-333.246	1/1:47:0,47,0:0:0:47,0:1678,0:-151.306,-14.1484,0,-151.306,-14.1484,-151.306	1/2:15:0,7,8:0:0:7,8:248,272:-42.526,-22.3159,-20.2087,-20.557,0,-18.1487	1/1:115:0,114,0:0:0:114,0:4066,0:-365.846,-34.3174,0,-365.846,-34.3174,-365.846	1/1:30:0,29,0:0:0:29,0:1021,0:-91.8407,-8.72987,0,-91.8407,-8.72987,-91.8407	1/2:12:0,8,4:0:0:8,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chr11	29402327	.	C	A	45059	PASS	AB=0.48625;ABP=12.0272;AC=47;AF=0.25;AN=188;AO=2693;CIGAR=1X;DP=11600;DPB=11600;DPRA=0.931128;EPP=5807.44;EPPR=19203.4;GTI=0;LEN=1;MEANALT=1.01786;MQM=59.9038;MQMR=59.9978;NS=94;NUMALT=1;ODDS=3.48986;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=96414;QR=318542;RO=8906;RPL=2691;RPP=5833.43;RPPR=19212.1;RPR=2;RUN=1;SAF=3;SAP=5824.76;SAR=2690;SRF=1;SRP=19333.5;SRR=8905;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:91:91,0:91:3256:0:0:0,-27.3937,-293.261	0/0:78:78,0:78:2791:0:0:0,-23.4803,-251.43	0/1:116:54,62:54:1913:62:2216:-164.777,0,-137.526	0/1:325:166,159:166:5955:159:5675:-413.029,0,-438.22	0/1:95:58,37:58:2088:37:1332:-91.5845,0,-159.592	0/1:66:28,38:28:1000:38:1364:-103.193,0,-70.4474	0/0:159:157,2:157:5595:2:72:0,-41.027,-496.833	0/0:186:186,0:186:6662:0:0:0,-55.9916,-599.653	0/1:192:108,84:108:3876:84:2997:-212.133,0,-291.236	0/0:87:87,0:87:3104:0:0:0,-26.1896,-279.585	0/1:61:32,29:32:1152:29:1040:-75.5515,0,-85.6273	0/0:134:134,0:134:4785:0:0:0,-40.338,-430.806	0/1:103:50,53:50:1792:53:1904:-140.632,0,-130.556	0/0:69:69,0:69:2461:0:0:0,-20.7711,-221.743	0/0:79:78,1:78:2804:1:36:0,-20.1831,-249.001	0/0:80:80,0:80:2872:0:0:0,-24.0824,-258.716	0/1:47:24,23:24:864:23:828:-60.6957,0,-63.9342	0/1:44:22,22:22:792:22:788:-57.9423,0,-58.3604	0/0:40:40,0:40:1440:0:0:0,-12.0412,-129.898	0/0:173:172,1:172:6146:1:36:0,-48.4799,-549.639	0/1:215:126,89:126:4505:89:3185:-222.15,0,-340.896	0/0:186:186,0:186:6637:0:0:0,-55.9916,-597.407	0/1:240:107,133:107:3809:133:4772:-357.247,0,-270.758	0/0:83:80,3:80:2868:3:108:0,-14.9103,-248.282	0/0:105:105,0:105:3738:0:0:0,-31.6081,-336.619	0/1:394:182,212:182:6453:212:7556:-561.473,0,-462.249	0/1:256:144,112:144:5149:112:4025:-285.373,0,-386.486	0/1:41:21,20:21:756:20:720:-52.7865,0,-56.025	0/1:343:200,143:200:7165:143:5109:-356.591,0,-541.65	0/1:182:103,79:103:3687:79:2830:-200.147,0,-277.245	0/0:154:144,10:144:5164:10:360:0,-13.6143,-432.155	0/1:16:9,7:9:324:7:252:-18.2125,0,-24.6894	0/1:36:21,15:21:756:15:540:-38.0995,0,-57.5301	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:267:267,0:267:9596:0:0:0,-80.375,-863.588	0/0:86:85,1:85:3041:1:36:0,-22.2903,-270.319	0/1:51:29,22:29:1040:22:792:-56.2531,0,-78.5618	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:218:101,117:101:3613:117:4195:-312.103,0,-259.75	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/0:282:282,0:282:10109:0:0:0,-84.8905,-909.739	0/0:75:75,0:75:2692:0:0:0,-22.5772,-242.524	0/0:90:90,0:90:3219:0:0:0,-27.0927,-289.932	0/0:189:189,0:189:6701:0:0:0,-56.8947,-603.165	0/1:138:69,69:69:2461:69:2480:-181.911,0,-180.201	0/0:203:203,0:203:7239:0:0:0,-61.1091,-651.561	0/0:143:142,1:142:5035:1:36:0,-39.449,-449.695	0/1:129:53,76:53:1904:76:2719:-206.118,0,-132.805	0/0:121:121,0:121:4329:0:0:0,-36.4246,-389.784	0/0:12:12,0:12:424:0:0:0,-3.61236,-38.4964	0/0:101:101,0:101:3632:0:0:0,-30.404,-327.084	0/0:94:94,0:94:3376:0:0:0,-28.2968,-304.055	0/1:22:13,9:13:464:9:320:-22.5197,0,-35.4748	0/0:201:201,0:201:7129:0:0:0,-60.507,-641.667	0/0:75:75,0:75:2684:0:0:0,-22.5772,-241.805	0/1:24:10,14:10:360:14:504:-38.4734,0,-25.5196	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:140:70,70:70:2512:70:2512:-184.08,0,-184.188	0/0:113:113,0:113:4051:0:0:0,-34.0164,-364.776	0/1:20:6,14:6:216:14:504:-39.6775,0,-13.7699	0/1:243:136,107:136:4854:107:3836:-272.286,0,-363.861	0/0:270:270,0:270:9663:0:0:0,-81.2781,-869.616	0/1:122:56,66:56:1986:66:2364:-176.293,0,-142.285	0/1:106:57,49:57:2052:49:1741:-125.063,0,-153.042	0/0:264:264,0:264:9435:0:0:0,-79.4719,-849.107	0/0:151:150,1:150:5380:1:36:0,-41.8573,-480.732	0/1:39:22,17:22:792:17:612:-43.6556,0,-59.8655	0/1:60:24,36:24:860:36:1296:-98.8821,0,-59.66	0/1:35:23,11:23:824:11:396:-25.5256,0,-64.0325	0/1:30:16,14:16:576:14:495:-35.8459,0,-43.1441	0/0:197:197,0:197:7031:0:0:0,-59.3029,-632.832	0/1:109:48,61:48:1724:61:2188:-164.373,0,-122.633	0/0:224:224,0:224:7995:0:0:0,-67.4307,-719.569	0/0:224:224,0:224:8040:0:0:0,-67.4307,-723.617	0/1:103:61,42:61:2188:42:1500:-104.285,0,-166.18	0/0:99:99,0:99:3556:0:0:0,-29.802,-320.247	0/1:42:18,24:18:644:24:864:-65.4393,0,-45.6473	0/1:147:72,75:72:2572:75:2685:-197.641,0,-187.479	0/0:216:216,0:216:7718:0:0:0,-65.0225,-694.651	0/1:365:188,177:188:6692:177:6328:-459.723,0,-492.478	0/1:65:35,30:35:1245:30:1076:-77.5859,0,-92.7858	0/1:86:43,43:43:1544:43:1548:-113.689,0,-113.364	0/0:85:85,0:85:3056:0:0:0,-25.5875,-275.268	0/0:191:188,3:188:6729:3:108:0,-47.4216,-595.608	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/1:80:42,38:42:1508:38:1364:-98.9783,0,-111.932	0/1:90:47,43:47:1688:43:1536:-111.44,0,-125.114	0/1:54:26,28:26:927:28:1008:-74.7807,0,-67.4917	0/1:94:59,35:59:2101:35:1237:-83.3248,0,-161.061	0/1:86:28,58:28:1000:58:2065:-160.227,0,-64.4268	0/0:162:162,0:162:5808:0:0:0,-48.7669,-522.832	0/0:153:153,0:153:5496:0:0:0,-46.0576,-494.764
chr11	29402334	.	A	G	43587.7	PASS	AB=0.482973;ABP=16.7643;AC=47;AF=0.25;AN=188;AO=2663;CIGAR=1X;DP=11575;DPB=11575;DPRA=1.01885;EPP=5768.28;EPPR=19337.8;GTI=0;LEN=1;MEANALT=1.05172;MQM=59.9189;MQMR=59.999;NS=94;NUMALT=1;ODDS=2.80924;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94638;QR=319476;RO=8908;RPL=2663;RPP=5785.64;RPPR=19346.5;RPR=0;RUN=1;SAF=2;SAP=5768.28;SAR=2661;SRF=1;SRP=19337.8;SRR=8907;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:89:89,0:89:3192:0:0:0,-26.7917,-287.503	0/0:78:78,0:78:2795:0:0:0,-23.4803,-251.789	0/1:116:55,61:55:1968:61:2148:-158.66,0,-142.476	0/1:326:165,160:165:5920:160:5671:-412.254,0,-434.713	0/1:97:59,38:59:2124:38:1347:-92.3296,0,-162.228	0/1:67:28,39:28:1004:39:1370:-103.427,0,-70.5069	0/0:160:160,0:160:5752:0:0:0,-48.1648,-517.793	0/0:185:185,0:185:6628:0:0:0,-55.6905,-596.598	0/1:189:107,82:107:3806:82:2936:-207.51,0,-285.844	0/0:87:87,0:87:3124:0:0:0,-26.1896,-281.386	0/1:60:32,28:32:1152:28:983:-70.7207,0,-85.9283	0/0:134:134,0:134:4800:0:0:0,-40.338,-432.156	0/1:102:50,52:50:1796:52:1851:-136.164,0,-131.217	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.093	0/0:79:79,0:79:2840:0:0:0,-23.7814,-255.838	0/0:83:83,0:83:2984:0:0:0,-24.9855,-268.791	0/1:47:24,23:24:864:23:816:-59.6133,0,-63.9342	0/1:43:22,21:22:792:21:734:-53.4171,0,-58.6614	0/0:40:39,1:39:1404:1:36:0,-8.44292,-123.061	0/0:175:174,1:174:6260:1:36:0,-49.082,-559.892	0/1:212:127,85:127:4564:85:3035:-209.562,0,-347.106	0/0:186:186,0:186:6664:0:0:0,-55.9916,-599.837	0/1:237:106,131:106:3800:131:4658:-348.002,0,-270.847	0/0:81:78,3:78:2808:3:104:0,-14.6806,-243.256	0/0:106:106,0:106:3796:0:0:0,-31.9092,-341.838	0/1:392:180,212:180:6456:212:7541:-560.73,0,-463.121	0/1:257:144,113:144:5148:113:3999:-282.739,0,-386.097	0/1:40:20,20:20:720:20:720:-53.0876,0,-53.0876	0/1:341:199,142:199:7129:142:5036:-350.631,0,-539.014	0/1:183:104,79:104:3709:79:2786:-195.892,0,-278.923	0/0:152:142,10:142:5091:10:360:0,-13.0123,-425.588	0/1:15:9,6:9:324:6:212:-14.9093,0,-24.9904	0/1:35:21,14:21:752:14:504:-35.162,0,-57.4702	0/1:12:7,5:7:252:5:172:-12.205,0,-19.4166	0/1:8:5,3:5:180:3:108:-7.66693,0,-14.1438	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:269:269,0:269:9659:0:0:0,-80.9771,-869.256	0/0:87:85,1:85:3044:1:36:0,-22.5952,-270.645	0/1:54:29,25:29:1040:25:896:-64.7047,0,-77.6587	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:215:101,114:101:3632:114:4059:-300.777,0,-262.362	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/0:285:284,1:284:10200:1:36:0,-82.1953,-914.325	0/0:77:77,0:77:2763:0:0:0,-23.1793,-248.91	0/0:90:90,0:90:3232:0:0:0,-27.0927,-291.101	0/0:190:190,0:190:6832:0:0:0,-57.1957,-614.946	0/1:137:69,68:69:2476:68:2416:-176.438,0,-181.852	0/0:199:199,0:199:7144:0:0:0,-59.905,-643.015	0/0:144:143,1:143:5124:1:36:0,-39.75,-457.703	0/1:128:52,76:52:1849:76:2716:-206.15,0,-128.156	0/0:122:121,0:121:4328:0:0:0,-36.4246,-389.376	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:100:100,0:100:3581:0:0:0,-30.103,-322.495	0/0:98:98,0:98:3520:0:0:0,-29.5009,-317.009	0/1:22:13,9:13:468:9:324:-22.8832,0,-35.837	0/0:197:197,0:197:7054:0:0:0,-59.3029,-634.919	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.122	0/1:24:10,14:10:356:14:500:-38.1115,0,-25.1565	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/1:137:70,67:70:2516:67:2392:-174.296,0,-185.45	0/0:113:113,0:113:4052:0:0:0,-34.0164,-364.867	0/1:20:6,14:6:212:14:500:-39.3156,0,-13.4042	0/1:238:133,105:133:4776:105:3754:-266.415,0,-358.35	0/0:272:272,0:272:9741:0:0:0,-81.8802,-876.636	0/1:118:57,60:57:2044:60:2132:-156.568,0,-148.651	0/1:106:58,48:58:2088:48:1720:-123.176,0,-156.281	0/0:264:263,1:263:9427:1:36:0,-75.8736,-844.79	0/0:150:149,1:149:5337:1:32:0,-41.9552,-477.262	0/1:37:22,15:22:788:15:540:-37.7984,0,-60.1067	0/1:62:25,37:25:896:37:1316:-100.078,0,-62.2965	0/1:36:24,12:24:860:12:416:-26.9255,0,-66.8848	0/1:29:16,13:16:576:13:468:-33.7236,0,-43.4451	0/0:193:193,0:193:6909:0:0:0,-58.0988,-621.875	0/1:107:47,60:47:1688:60:2140:-160.658,0,-119.997	0/0:222:222,0:222:7951:0:0:0,-66.8287,-715.612	0/0:225:225,0:225:8080:0:0:0,-67.7317,-727.214	0/1:101:61,40:61:2192:40:1436:-99.1336,0,-167.141	0/0:101:101,0:101:3620:0:0:0,-30.404,-326.005	0/1:41:17,24:17:604:24:851:-64.5679,0,-42.3484	0/1:148:73,75:73:2628:75:2679:-196.802,0,-192.214	0/0:215:215,0:215:7712:0:0:0,-64.7214,-694.111	0/1:362:187,175:187:6684:175:6209:-449.938,0,-492.663	0/1:64:35,29:35:1260:29:1018:-72.6645,0,-94.4396	0/1:86:44,42:44:1576:42:1477:-107.335,0,-116.243	0/0:86:86,0:86:3087:0:0:0,-25.8886,-278.057	0/0:191:188,3:188:6752:3:108:0,-47.4216,-597.676	0/0:47:47,0:47:1666:0:0:0,-14.1484,-150.226	0/1:84:46,38:46:1652:38:1360:-97.4141,0,-123.682	0/1:90:48,42:48:1724:42:1487:-107.031,0,-128.353	0/1:53:26,27:26:923:27:968:-71.4828,0,-67.4322	0/1:97:60,37:60:2147:37:1306:-88.6294,0,-164.297	0/1:87:29,58:29:1044:58:2039:-157.575,0,-68.0852	0/0:162:160,2:160:5740:2:72:0,-41.9301,-509.878	0/0:152:152,0:152:5468:0:0:0,-45.7566,-492.245
chr11	29500019	.	C	T	26363.1	PASS	AB=0.472969;ABP=24.4934;AC=48;AF=0.255319;AN=188;AO=1618;CIGAR=1X;DP=6878;DPB=6878;DPRA=1.02317;EPP=3516.45;EPPR=11385.9;GTI=2;LEN=1;MEANALT=1.03448;MQM=59.9951;MQMR=59.9912;NS=94;NUMALT=1;ODDS=0.570876;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57942;QR=187825;RO=5254;RPL=0;RPP=3516.45;RPPR=11385.9;RPR=1618;RUN=1;SAF=1618;SAP=3516.45;SAR=0;SRF=5254;SRP=11411.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:65:65,0:65:2323:0:0:0,-19.5669,-209.33	0/0:49:48,1:48:1716:1:36:0,-11.1522,-151.127	0/1:124:68,55:68:2432:55:1976:-140.857,0,-181.887	0/1:170:81,88:81:2912:88:3155:-232.941,0,-211.081	0/1:29:10,19:10:356:19:684:-53.1605,0,-23.6514	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/0:23:23,0:23:792:0:0:0,-6.92369,-71.5942	0/1:72:34,38:34:1216:38:1351:-100.215,0,-88.0724	0/1:89:48,41:48:1715:41:1472:-105.984,0,-127.843	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/1:85:37,48:37:1320:48:1720:-129.498,0,-93.5144	0/0:101:101,0:101:3590:0:0:0,-30.404,-323.308	0/1:73:39,34:39:1396:34:1216:-87.7714,0,-103.964	0/0:64:64,0:64:2279:0:0:0,-19.2659,-205.372	0/0:62:62,0:62:2219:0:0:0,-18.6639,-199.971	0/0:93:93,0:93:3344:0:0:0,-27.9958,-301.176	0/1:19:7,12:7:252:12:432:-33.5016,0,-17.3094	0/1:31:20,11:20:716:11:392:-26.2881,0,-55.4358	0/0:38:38,0:38:1360:0:0:0,-11.4391,-122.701	0/0:87:86,1:86:3087:1:36:0,-22.5913,-274.458	0/1:160:90,70:90:3191:70:2516:-178.527,0,-239.248	0/0:103:103,0:103:3688:0:0:0,-31.0061,-332.123	0/1:76:48,28:48:1712:28:1004:-67.7976,0,-131.487	0/0:46:44,2:44:1576:2:68:0,-7.38967,-135.674	0/0:73:72,1:72:2580:1:36:0,-18.3769,-228.851	0/1:211:110,101:110:3936:101:3601:-260.778,0,-290.915	0/1:171:106,65:106:3799:65:2327:-158.213,0,-290.631	0/1:33:16,17:16:576:17:612:-45.4794,0,-42.241	0/1:136:84,52:84:3000:52:1872:-127.819,0,-229.292	0/1:112:49,63:49:1760:63:2256:-169.587,0,-124.969	0/0:83:82,1:82:2928:1:36:0,-21.3872,-260.157	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:24:15,9:15:528:9:324:-22.2811,0,-40.6266	0/1:8:3,5:3:108:5:172:-13.4097,0,-7.66693	0/1:12:5,7:5:180:7:252:-19.4166,0,-12.9397	0/0:27:27,0:27:964:0:0:0,-8.12781,-87.0768	0/0:169:169,0:169:6067:0:0:0,-50.8741,-546.13	0/0:112:112,0:112:4000:0:0:0,-33.7154,-360.191	0/1:46:25,21:25:879:21:756:-54.5198,0,-65.5794	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3812	0/1:71:27,44:27:968:44:1569:-120.126,0,-66.0642	0/0:50:50,0:50:1782:0:0:0,-15.0515,-160.661	0/0:107:107,0:107:3828:0:0:0,-32.2102,-344.717	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/0:78:78,0:78:2792:0:0:0,-23.4803,-251.52	0/1:83:46,37:46:1639:37:1317:-93.8443,0,-122.812	0/0:137:136,0:136:4841:0:0:0,-40.9401,-435.483	0/0:60:60,0:60:2143:0:0:0,-18.0618,-193.137	0/1:90:49,41:49:1752:41:1456:-104.241,0,-130.871	0/0:145:145,0:145:5188:0:0:0,-43.6493,-467.06	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:97:95,2:95:3389:2:68:0,-22.7422,-298.767	0/0:21:21,0:21:752:0:0:0,-6.32163,-68.0063	0/1:4:3,1:3:108:1:36:-2.39415,0,-8.87105	0/0:110:109,0:109:3888:0:0:0,-32.8123,-349.756	0/0:72:72,0:72:2584:0:0:0,-21.6742,-232.809	0/1:9:1,8:1:36:8:288:-23.5581,0,-0.889005	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:52:27,25:27:959:25:892:-64.9461,0,-70.9718	0/0:68:67,1:67:2395:1:36:0,-16.8718,-212.208	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	0/1:153:93,60:93:3328:60:2152:-147.89,0,-253.68	0/0:84:84,0:84:3020:0:0:0,-25.2865,-272.03	0/1:41:23,18:23:806:18:648:-46.3097,0,-60.516	0/1:59:35,24:35:1256:24:860:-59.9611,0,-95.5845	0/0:117:114,3:114:4080:3:108:0,-25.1453,-357.311	0/0:117:113,4:113:4051:4:144:0,-21.9069,-351.462	0/1:53:20,33:20:720:33:1184:-90.9137,0,-49.1742	0/1:37:19,18:19:680:18:648:-47.5138,0,-50.3911	0/1:45:28,17:28:1008:17:612:-41.8671,0,-77.49	0/1:29:18,11:18:644:11:396:-27.2529,0,-49.5607	0/0:119:117,0:117:4180:0:0:0,-35.2205,-376.035	0/1:69:38,31:38:1364:31:1112:-79.6203,0,-102.29	0/0:102:102,0:102:3626:0:0:0,-30.7051,-325.919	0/0:159:158,1:158:5631:1:36:0,-44.2655,-503.315	0/1:83:43,40:43:1544:40:1432:-104.192,0,-114.268	0/0:41:41,0:41:1472:0:0:0,-12.3422,-132.776	0/1:20:9,11:9:312:11:396:-29.9621,0,-22.3948	0/1:77:40,37:40:1432:37:1323:-96.192,0,-105.998	0/0:101:101,0:101:3620:0:0:0,-30.404,-326.005	0/1:160:99,61:99:3541:61:2188:-149.021,0,-270.732	0/1:54:24,30:24:864:30:1076:-80.8972,0,-61.8269	0/1:89:43,46:43:1544:46:1648:-121.817,0,-112.461	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/0:134:134,0:134:4790:0:0:0,-40.338,-431.256	0/0:26:26,0:26:928:0:0:0,-7.82678,-83.8383	0/1:76:40,36:40:1428:36:1288:-93.3453,0,-105.939	0/1:69:37,32:37:1319:32:1152:-83.2191,0,-98.2401	0/1:70:26,44:26:919:44:1576:-121.059,0,-61.9541	0/1:117:64,53:64:2278:53:1900:-136.057,0,-170.06	0/1:71:22,49:22:771:49:1739:-135.421,0,-48.3372	0/0:56:56,0:56:2000:0:0:0,-16.8577,-180.274	0/0:96:96,0:96:3444:0:0:0,-28.8989,-310.172
chr11	30181525	.	CTCAGGCA	CTTAAGGCA,CTTCAGGCA	623951	PASS	AB=0.535455,0.453789;ABP=222.274,375.491;AC=138,50;AF=0.734043,0.265957;AN=188;AO=21985,9123;CIGAR=1M1I1M1X5M,1M1I7M;DP=31436;DPB=35359;DPRA=0,2.023;EPP=46947.1,19519.1;EPPR=29.068;GTI=2;LEN=9,1;MEANALT=4.19149,5.16071;MQM=41.8904,42.0434;MQMR=45.75;NS=94;NUMALT=2;ODDS=0.118985;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=772299,321990;QR=426;RO=12;RPL=92,34;RPP=46947.1,19519.1;RPPR=29.068;RPR=21893,9089;RUN=1,1;SAF=21985,9123;SAP=47742.8,19813.4;SAR=0,0;SRF=12;SRP=29.068;SRR=0;TYPE=complex,ins	GT:DP:AD:RO:QR:AO:QA:GL	1/1:79:0,78,0:0:0:78,0:2682,0:-235.918,-23.4803,0,-235.918,-23.4803,-235.918	1/1:100:0,100,0:0:0:100,0:3501,0:-307.921,-30.103,0,-307.921,-30.103,-307.921	1/2:135:0,61,72:0:0:61,72:2147,2501:-368.708,-198.27,-179.907,-170.521,0,-148.846	1/2:219:0,129,90:0:0:129,90:4495,3165:-603.875,-250.504,-211.671,-353.711,0,-326.619	1/2:49:0,30,15:0:0:30,15:1059,530:-126.029,-41.9698,-32.9389,-84.0693,0,-79.5538	1/2:58:0,24,33:0:0:24,33:847,1175:-160.742,-93.5339,-86.3092,-67.28,0,-57.346	1/1:126:0,124,0:0:0:124,0:4306,0:-376.266,-37.3277,0,-376.266,-37.3277,-376.266	1/2:106:0,52,53:0:0:52,53:1830,1864:-292.178,-146.749,-131.095,-145.5,0,-129.545	1/2:111:0,62,49:0:0:62,49:2184,1733:-311.01,-137.883,-119.219,-173.472,0,-158.722	1/1:66:0,65,0:0:0:65,0:2274,0:-199.372,-19.567,0,-199.372,-19.567,-199.372	1/2:465:0,234,224:0:0:234,224:8193,7899:-1266.46,-621.261,-550.82,-645.271,0,-577.84	1/1:105:0,104,0:0:0:104,0:3548,0:-311.04,-31.3071,0,-311.04,-31.3071,-311.04	1/2:58:0,40,17:0:0:40,17:1420,598:-159.716,-47.5347,-35.4935,-112.319,0,-107.202	1/1:75:0,73,0:0:0:73,0:2594,0:-227.73,-21.9752,0,-227.73,-21.9752,-227.73	1/1:69:0,69,0:0:0:69,0:2438,0:-212.316,-20.7711,0,-212.316,-20.7711,-212.316	1/1:119:0,119,0:0:0:119,0:4196,0:-368.878,-35.8226,0,-368.878,-35.8226,-368.878	1/2:40:0,20,20:0:0:20,20:704,707:-111.981,-56.6406,-50.62,-55.6842,0,-49.6636	1/2:34:0,12,22:0:0:12,22:424,775:-95.8034,-62.0587,-58.4463,-34.0903,0,-27.4676	1/1:202:0,202,0:0:0:202,0:7095,0:-622.5,-60.8081,0,-622.5,-60.8081,-622.5	1/1:191:0,187,0:0:0:187,0:6595,0:-575.911,-56.2926,0,-575.911,-56.2926,-575.911	1/2:112:0,63,48:0:0:63,48:2244,1691:-312.382,-133.881,-114.916,-178.571,0,-164.121	1/1:161:0,158,0:0:0:158,0:5540,0:-482.255,-47.5627,0,-482.255,-47.5627,-482.255	1/2:139:0,74,65:0:0:74,65:2602,2300:-386.718,-181.731,-159.455,-205.33,0,-185.763	1/1:81:0,76,4:0:0:76,4:2699,140:-237.352,-22.8783,0,-226.4,-11.9368,-225.195	1/1:117:0,117,0:0:0:117,0:4122,0:-362.425,-35.2205,0,-362.425,-35.2205,-362.425	1/2:282:0,121,156:0:0:121,156:4232,5544:-767.873,-435.921,-399.497,-331.961,0,-285.001	1/2:280:0,146,133:0:0:146,133:5143,4670:-778.764,-370.623,-326.672,-408.214,0,-368.177	1/2:19:0,5,14:0:0:5,14:172,504:-54.0186,-40.3438,-38.8386,-14.0157,0,-9.80132	1/2:221:0,138,82:0:0:138,82:4885,2898:-610.034,-227.059,-185.517,-383.056,0,-358.371	1/2:149:0,77,70:0:0:77,70:2697,2463:-408.201,-195.566,-172.386,-212.704,0,-191.632	1/1:135:0,134,0:0:0:134,0:4706,0:-411.549,-40.338,0,-411.549,-40.338,-411.549	1/2:1229:0,566,653:0:0:566,653:19851,23165:-3409.94,-1837.75,-1667.36,-1572.27,0,-1375.7	1/2:1026:0,590,432:0:0:590,432:20760,15280:-2858.66,-1211.71,-1034.11,-1647,0,-1516.96	1/2:2040:0,1208,813:0:0:1208,813:42293,28633:-5621.79,-2268.93,-1905.29,-3352.92,0,-3108.19	1/2:3375:6,1873,1462:6:213:1873,1462:65821,51565:-9290.29,-4074.86,-3528.08,-5200.24,0,-4777.19	1/1:2755:0,2732,2:0:0:2732,2:96077,72:-8440.16,-822.414,0,-8434.42,-816.67,-8433.82	1/1:154:1,150,0:1:35:150,0:5303,0:-457.362,-42.2816,0,-457.663,-45.1545,-460.511	1/1:133:0,131,0:0:0:131,0:4536,0:-397.597,-39.4349,0,-397.597,-39.4349,-397.597	1/2:383:0,207,172:0:0:207,172:7297,6090:-1060.92,-483.239,-420.926,-577.737,0,-525.96	1/1:1530:0,1514,0:0:0:1514,0:53233,0:-4675,-455.759,0,-4675,-455.759,-4675	1/2:127:0,64,62:0:0:64,62:2218,2206:-350.821,-175.482,-156.216,-175.41,0,-156.746	1/1:210:0,207,0:0:0:207,0:7289,0:-639.119,-62.3132,0,-639.119,-62.3132,-639.119	1/1:204:0,201,1:0:0:201,1:7074,36:-622.065,-60.507,0,-619.197,-57.6065,-618.896	1/1:40:0,40,0:0:0:40,0:1408,0:-123.556,-12.0412,0,-123.556,-12.0412,-123.556	1/1:52:0,51,0:0:0:51,0:1771,0:-154.547,-15.3525,0,-154.547,-15.3525,-154.547	1/1:204:0,203,0:0:0:203,0:7129,0:-620.061,-61.1091,0,-620.061,-61.1091,-620.061	1/2:138:0,86,49:0:0:86,49:3049,1739:-380.331,-137.728,-111.839,-242.674,0,-227.923	1/1:163:0,159,0:0:0:159,0:5588,0:-488.69,-47.8638,0,-488.69,-47.8638,-488.69	1/1:105:0,105,0:0:0:105,0:3730,0:-326.53,-31.6082,0,-326.53,-31.6082,-326.53	1/2:110:0,69,39:0:0:69,39:2421,1355:-296.951,-106.166,-85.3952,-190.855,0,-179.115	1/1:132:0,132,0:0:0:132,0:4638,0:-403.775,-39.736,0,-403.775,-39.736,-403.775	1/1:1466:0,1454,0:0:0:1454,0:51243,0:-4479.04,-437.698,0,-4479.04,-437.698,-4479.04	1/1:135:0,132,0:0:0:132,0:4682,0:-411.579,-39.736,0,-411.579,-39.736,-411.579	1/1:86:0,82,0:0:0:82,0:2852,0:-247.787,-24.6845,0,-247.787,-24.6845,-247.787	1/2:930:0,478,439:0:0:478,439:16789,15480:-2555.38,-1225.29,-1081.4,-1330.15,0,-1198	1/1:122:0,119,0:0:0:119,0:4155,0:-365.493,-35.8226,0,-365.493,-35.8226,-365.493	1/1:89:0,89,0:0:0:89,0:3125,0:-273.342,-26.7917,0,-273.342,-26.7917,-273.342	1/2:1185:0,590,580:0:0:590,580:20770,20388:-3223.44,-1596.1,-1418.49,-1627.4,0,-1452.8	1/1:900:0,895,0:0:0:895,0:31340,0:-2725.38,-269.422,0,-2725.38,-269.422,-2725.38	1/2:108:0,61,46:0:0:61,46:2131,1616:-297.138,-128.273,-109.911,-168.935,0,-155.087	1/1:100:0,99,0:0:0:99,0:3453,0:-301.054,-29.802,0,-301.054,-29.802,-301.054	1/2:939:0,468,459:0:0:468,459:16458,16141:-2571.78,-1272.8,-1131.92,-1299.03,0,-1160.86	1/2:69:0,36,33:0:0:36,33:1250,1176:-190.802,-92.9409,-82.1038,-98.2016,0,-88.2676	1/2:196:0,128,65:0:0:128,65:4503,2289:-535.474,-180.349,-141.817,-355.194,0,-335.627	1/2:69:0,49,19:0:0:49,19:1720,678:-189.716,-53.824,-39.0735,-135.964,0,-130.244	1/2:78:0,21,57:0:0:21,57:750,1987:-216.54,-157.535,-151.214,-59.3485,0,-42.1898	1/1:145:0,144,0:0:0:144,0:5054,0:-441.074,-43.3483,0,-441.074,-43.3483,-441.074	1/1:230:0,226,1:0:0:226,1:7947,36:-694.811,-68.0328,0,-691.943,-65.1511,-691.642	1/2:575:0,299,272:0:0:299,272:10537,9580:-1593.17,-758.625,-668.617,-834.592,0,-752.712	1/2:74:0,43,30:0:0:43,30:1525,1060:-205.341,-84.5513,-71.607,-120.891,0,-111.86	1/2:41:0,20,21:0:0:20,21:702,756:-114.492,-59.8116,-53.791,-55.0229,0,-48.7013	1/2:862:1,464,389:1:36:464,389:16172,13688:-2349.45,-1076.45,-939.624,-1270.49,0,-1156.24	1/1:179:0,174,0:0:0:174,0:6093,0:-535.29,-52.3792,0,-535.29,-52.3792,-535.29	1/2:84:0,42,41:0:0:42,41:1483,1462:-233.755,-116.234,-103.59,-117.595,0,-105.253	1/2:134:0,71,59:0:0:71,59:2432,2087:-358.147,-165.735,-144.362,-192.44,0,-174.679	1/1:124:0,124,0:0:0:124,0:4370,0:-381.854,-37.3277,0,-381.854,-37.3277,-381.854	1/2:144:0,72,68:0:0:72,68:2522,2399:-390.751,-190.785,-169.111,-200.033,0,-179.563	1/1:73:0,72,1:0:0:72,1:2550,36:-223.987,-21.6742,0,-221.119,-18.4542,-220.818	1/2:1344:1,705,628:1:35:705,628:24852,22187:-3733.04,-1759.94,-1550.51,-1970.68,0,-1784.42	1/2:34:0,12,22:0:0:12,22:432,754:-93.51,-59.0878,-55.4754,-34.7666,0,-28.144	1/1:138:0,137,0:0:0:137,0:4779,0:-419.253,-41.2411,0,-419.253,-41.2411,-419.253	1/2:224:0,108,110:0:0:108,110:3805,3896:-607.231,-307.748,-275.237,-299.53,0,-266.416	1/2:66:0,36,29:0:0:36,29:1275,1013:-180.38,-79.5179,-68.6808,-100.93,0,-92.1998	1/2:76:0,40,36:0:0:40,36:1407,1279:-212.728,-101.584,-89.5424,-111.489,0,-100.652	1/1:34:0,33,0:0:0:33,0:1152,0:-100.529,-9.93399,0,-100.529,-9.93399,-100.529	1/1:115:0,114,1:0:0:114,1:3996,36:-348.893,-34.3174,0,-346.042,-31.1158,-345.741	1/1:21:0,19,0:0:0:19,0:676,0:-59.3845,-5.71957,0,-59.3845,-5.71957,-59.3845	1/2:72:0,41,31:0:0:41,31:1452,1100:-202.672,-87.5992,-75.257,-115.418,0,-106.087	1/2:80:0,39,41:0:0:39,41:1388,1443:-223.963,-113.952,-102.212,-110.355,0,-98.013	1/2:596:1,323,266:1:36:323,266:11352,9430:-1644.9,-745.714,-651.35,-896.673,0,-819.467	1/2:1124:1,624,487:1:35:624,487:21882,17286:-3098.77,-1366.64,-1181.59,-1729.7,0,-1585.89	1/2:73:1,32,40:1:36:32,40:1102,1409:-194.889,-108.519,-101.738,-83.8081,0,-74.6188	1/1:5:0,5,0:0:0:5,0:171,0:-15.3615,-1.50515,0,-15.3615,-1.50515,-15.3615	1/1:84:0,83,0:0:0:83,0:2910,0:-253.649,-24.9855,0,-253.649,-24.9855,-253.649
chr11	30181535	.	AAGCTTC	AAACTGTC,CAACTGTC	622301	PASS	AB=0.522405,0.470184;ABP=93.015,162.414;AC=138,50;AF=0.734043,0.265957;AN=188;AO=22033,9718;CIGAR=2M1X2M1I2M,1X1M1X2M1I2M;DP=31996;DPB=36559.6;DPRA=0,2.58296;EPP=47847.1,21105.4;EPPR=7.35324;GTI=2;LEN=8,8;MEANALT=3.71277,4.61404;MQM=41.8914,41.8681;MQMR=60;NS=94;NUMALT=2;ODDS=3.90198;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=771701,337039;QR=72;RO=2;RPL=22033,9718;RPP=47847.1,21105.4;RPPR=7.35324;RPR=0,0;RUN=1,1;SAF=22033,9718;SAP=47847.1,21105.4;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:79:0,79,0:0:0:79,0:2728,0:-240.148,-23.7814,0,-240.148,-23.7814,-240.148	1/1:100:0,99,0:0:0:99,0:3484,0:-306.486,-29.802,0,-306.486,-29.802,-306.486	1/2:136:0,61,74:0:0:61,74:2150,2566:-374.093,-203.42,-185.058,-170.723,0,-148.447	1/2:220:0,128,92:0:0:128,92:4491,3207:-606.933,-253.632,-215.1,-353.641,0,-325.946	1/2:49:0,34,15:0:0:34,15:1201,525:-137.05,-41.9168,-31.6817,-95.4757,0,-90.9603	1/2:59:0,24,35:0:0:24,35:847,1234:-165.643,-98.4029,-91.1782,-67.5846,0,-57.0485	1/1:126:0,125,0:0:0:125,0:4372,0:-381.272,-37.6288,0,-381.272,-37.6288,-381.272	1/2:108:0,54,54:0:0:54,54:1897,1853:-296.569,-146.127,-129.872,-150.78,0,-134.524	1/2:113:0,61,51:0:0:61,51:2116,1778:-308.988,-141.179,-122.817,-167.867,0,-152.515	1/1:66:0,66,0:0:0:66,0:2304,0:-202.398,-19.868,0,-202.398,-19.868,-202.398	1/2:473:0,238,229:0:0:238,229:8314,7978:-1280.41,-626.807,-555.162,-653.666,0,-584.73	1/1:105:0,104,0:0:0:104,0:3578,0:-313.767,-31.3071,0,-313.767,-31.3071,-313.767	1/2:61:0,42,18:0:0:42,18:1459,633:-165.31,-50.5214,-37.8782,-114.857,0,-109.438	1/1:75:0,73,0:0:0:73,0:2537,0:-223.425,-21.9752,0,-223.425,-21.9752,-223.425	1/1:69:0,69,0:0:0:69,0:2406,0:-209.927,-20.7711,0,-209.927,-20.7711,-209.927	1/1:118:0,118,0:0:0:118,0:4165,0:-366.204,-35.5215,0,-366.204,-35.5215,-366.204	1/2:40:0,20,20:0:0:20,20:691,703:-110.643,-56.3309,-50.3103,-54.652,0,-48.6314	1/2:34:0,12,22:0:0:12,22:408,772:-94.2427,-61.7867,-58.1744,-32.7935,0,-26.1708	1/1:202:0,200,0:0:0:200,0:7022,0:-616.005,-60.206,0,-616.005,-60.206,-616.005	1/1:191:0,188,0:0:0:188,0:6603,0:-576.319,-56.5936,0,-576.319,-56.5936,-576.319	1/2:115:0,64,50:0:0:64,50:2260,1739:-317.635,-137.89,-118.624,-179.815,0,-164.764	1/1:161:0,160,0:0:0:160,0:5584,0:-485.998,-48.1648,0,-485.998,-48.1648,-485.998	1/2:146:0,74,71:0:0:74,71:2564,2489:-398.614,-196.745,-174.469,-201.936,0,-180.563	1/1:82:0,78,4:0:0:78,4:2734,138:-240.394,-23.4803,0,-229.565,-12.3171,-228.361	1/1:117:0,115,0:0:0:115,0:4032,0:-354.701,-34.6185,0,-354.701,-34.6185,-354.701	1/2:290:0,125,165:0:0:125,165:4356,5741:-793.419,-451.731,-414.102,-342.026,0,-292.356	1/2:289:0,145,142:0:0:145,142:5093,4960:-798.08,-393.865,-350.215,-404.242,0,-361.496	1/2:20:0,5,15:0:0:5,15:173,532:-56.3297,-42.5564,-41.0512,-14.1145,0,-9.5991	1/2:230:0,139,89:0:0:139,89:4872,3063:-622.298,-240.393,-198.55,-381.978,0,-355.187	1/2:154:0,77,76:0:0:77,76:2690,2642:-421.327,-209.217,-186.038,-212.193,0,-189.314	1/1:135:0,133,0:0:0:133,0:4684,0:-409.666,-40.037,0,-409.666,-40.037,-409.666	1/2:1260:0,564,687:0:0:564,687:19802,24014:-3472.41,-1903.34,-1733.56,-1569.12,0,-1362.31	1/2:1054:0,594,455:0:0:594,455:20764,15909:-2907.62,-1260.82,-1082.01,-1646.85,0,-1509.88	1/2:2097:0,1209,868:0:0:1209,868:42315,30110:-5738.29,-2382.81,-2018.86,-3355.54,0,-3094.25	1/2:3486:1,1877,1581:1:36:1877,1581:65884,54626:-9548.63,-4326.39,-3764.3,-5219.64,0,-4746.65	1/1:2755:0,2738,3:0:0:2738,3:95951,102:-8431.4,-824.22,0,-8423.54,-816.346,-8422.64	1/1:154:1,152,0:1:36:152,0:5347,0:-460.89,-42.7967,0,-461.191,-45.7566,-464.129	1/1:133:0,131,0:0:0:131,0:4551,0:-398.644,-39.4349,0,-398.644,-39.4349,-398.644	1/2:392:0,208,182:0:0:208,182:7258,6283:-1072.59,-498.089,-435.475,-574.533,0,-519.745	1/1:1531:0,1518,0:0:0:1518,0:53099,0:-4664.1,-456.964,0,-4664.1,-456.964,-4664.1	1/2:130:0,64,66:0:0:64,66:2215,2285:-356.772,-181.595,-162.329,-175.515,0,-155.647	1/1:210:0,207,0:0:0:207,0:7224,0:-634.411,-62.3132,0,-634.411,-62.3132,-634.411	1/1:204:0,201,1:0:0:201,1:7051,32:-620.196,-60.507,0,-617.647,-57.956,-617.346	1/1:40:0,40,0:0:0:40,0:1427,0:-125.125,-12.0412,0,-125.125,-12.0412,-125.125	1/1:52:0,51,0:0:0:51,0:1749,0:-152.812,-15.3525,0,-152.812,-15.3525,-152.812	1/1:204:0,204,0:0:0:204,0:7099,0:-617.791,-61.4101,0,-617.791,-61.4101,-617.791	1/2:145:0,88,57:0:0:88,57:3082,1961:-399.351,-154.64,-128.149,-245.049,0,-227.89	1/1:161:0,160,0:0:0:160,0:5594,0:-489.579,-48.1648,0,-489.579,-48.1648,-489.579	1/1:104:0,104,0:0:0:104,0:3687,0:-322.934,-31.3071,0,-322.934,-31.3071,-322.934	1/2:110:0,67,41:0:0:67,41:2333,1408:-294.236,-109.957,-89.7879,-184.354,0,-172.012	1/1:131:0,130,0:0:0:130,0:4548,0:-395.909,-39.1339,0,-395.909,-39.1339,-395.909	1/1:1469:0,1459,1:0:0:1459,1:51318,36:-4485.8,-439.203,0,-4482.95,-436.344,-4482.64	1/1:135:0,132,0:0:0:132,0:4627,0:-406.967,-39.736,0,-406.967,-39.736,-406.967	1/1:86:0,86,0:0:0:86,0:2983,0:-259.142,-25.8886,0,-259.142,-25.8886,-259.142	1/2:959:0,478,472:0:0:478,472:16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chr11	30389830	.	TGCCAG	CGCAAT,CGCAAG	155065	PASS	AB=0.554729,0.44124;ABP=86.9126,99.7273;AC=139,49;AF=0.739362,0.260638;AN=188;AO=5135,1431;CIGAR=1X2M1X1M1X,1X2M1X2M;DP=6598;DPB=6598;DPRA=0,0.881982;EPP=3508.08,674.065;EPPR=0;GTI=3;LEN=6,6;MEANALT=1.89362,2.26415;MQM=35.9336,49.1391;MQMR=0;NS=94;NUMALT=2;ODDS=2.23876;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=180857,50247;QR=0;RO=0;RPL=4007,1048;RPP=3508.08,674.065;RPPR=0;RPR=1128,383;RUN=1,1;SAF=0,0;SAP=11153.5,3110.39;SAR=5135,1431;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:33:0,32,0:0:0:32,0:1122,0:-94.5626,-9.63296,0,-94.5626,-9.63296,-94.5626	1/1:73:0,73,0:0:0:73,0:2580,0:-218.202,-21.9752,0,-218.202,-21.9752,-218.202	1/2:90:0,51,39:0:0:51,39:1785,1372:-247.307,-111.446,-96.0936,-136.202,0,-124.461	1/2:115:0,86,28:0:0:86,28:3046,969:-306.958,-78.4149,-52.5263,-228.635,0,-220.206	1/2:37:0,18,17:0:0:18,17:646,599:-94.566,-48.4302,-43.0117,-46.1989,0,-41.0814	1/2:33:0,21,12:0:0:21,12:739,430:-91.5985,-34.997,-28.6753,-56.9481,0,-53.3357	1/1:88:0,87,0:0:0:87,0:3044,0:-253.407,-26.1896,0,-253.407,-26.1896,-253.407	1/2:84:0,53,31:0:0:53,31:1857,1087:-228.622,-88.3601,-72.4055,-140.603,0,-131.271	1/2:46:0,21,25:0:0:21,25:744,888:-127.865,-72.5188,-66.1972,-55.6851,0,-48.1593	1/1:114:0,113,0:0:0:113,0:3968,0:-330.891,-34.0164,0,-330.891,-34.0164,-330.891	1/2:38:0,20,18:0:0:20,18:699,630:-103.405,-51.1763,-45.1557,-52.5652,0,-47.1466	1/1:73:0,73,0:0:0:73,0:2572,0:-218.698,-21.9752,0,-218.698,-21.9752,-218.698	1/2:52:0,32,19:0:0:32,19:1133,680:-141.671,-54.956,-45.323,-86.7224,0,-81.0028	1/1:86:0,86,0:0:0:86,0:3025,0:-240.038,-25.8886,0,-240.038,-25.8886,-240.038	1/1:40:0,40,0:0:0:40,0:1400,0:-117.988,-12.0412,0,-117.988,-12.0412,-117.988	1/1:101:0,99,0:0:0:99,0:3447,0:-277.049,-29.802,0,-277.049,-29.802,-277.049	1/2:69:0,38,31:0:0:38,31:1340,1085:-189.811,-88.2167,-76.7776,-101.934,0,-92.6025	1/2:61:0,28,33:0:0:28,33:966,1137:-165.187,-91.9292,-83.5004,-73.5898,0,-63.6558	1/1:35:0,35,0:0:0:35,0:1241,0:-105.973,-10.5361,0,-105.973,-10.5361,-105.973	1/1:114:0,113,0:0:0:113,0:3967,0:-330.514,-34.0164,0,-330.514,-34.0164,-330.514	1/2:63:0,29,34:0:0:29,34:1008,1187:-167.757,-96.0482,-87.3183,-72.0341,0,-61.7991	1/1:100:0,98,0:0:0:98,0:3474,0:-285.598,-29.5009,0,-285.598,-29.5009,-285.598	1/2:12:0,2,10:0:0:2,10:71,339:-33.0942,-27.7269,-27.1248,-5.70001,0,-2.68971	1/1:62:0,57,4:0:0:57,4:2023,144:-161.195,-17.1587,0,-149.556,-5.47597,-148.352	1/1:38:0,38,0:0:0:38,0:1328,0:-107.517,-11.4391,0,-107.517,-11.4391,-107.517	1/2:232:0,115,117:0:0:115,117:4064,4133:-637.337,-334.737,-300.118,-302.939,0,-267.718	1/2:173:0,101,72:0:0:101,72:3560,2570:-461.791,-207.787,-177.383,-254.341,0,-232.667	1/2:15:0,9,6:0:0:9,6:320,215:-40.6538,-17.7257,-15.0164,-23.2679,0,-21.4617	1/2:179:0,112,67:0:0:112,67:3950,2348:-481.609,-189.597,-155.881,-292.35,0,-272.181	1/2:56:0,25,30:0:0:25,30:892,1063:-149.787,-85.9485,-78.4228,-63.9523,0,-54.9214	1/1:57:0,56,0:0:0:56,0:1970,0:-163.339,-16.8577,0,-163.339,-16.8577,-163.339	1/2:20:0,9,11:0:0:9,11:323,393:-55.158,-32.101,-29.3917,-23.3915,0,-20.0802	1/2:7:0,4,3:0:0:4,3:136,100:-17.6409,-8.36811,-7.16399,-9.58702,0,-8.68393	1/2:9:0,7,2:0:0:7,2:243,69:-24.5556,-5.93755,-3.83034,-18.9589,0,-18.3569	1/2:8:0,6,2:0:0:6,2:212,65:-20.7561,-5.5622,-3.75602,-15.5159,0,-14.9139	1/1:7:0,7,0:0:0:7,0:249,0:-19.9848,-2.10721,0,-19.9848,-2.10721,-19.9848	1/1:176:0,174,0:0:0:174,0:6131,0:-507.012,-52.3792,0,-507.012,-52.3792,-507.012	1/1:166:0,165,0:0:0:165,0:5818,0:-462.203,-49.67,0,-462.203,-49.67,-462.203	1/2:68:0,33,34:0:0:33,34:1177,1206:-188.016,-97.8374,-87.9034,-90.1846,0,-79.9496	1/1:5:0,5,0:0:0:5,0:173,0:-14.5661,-1.50515,0,-14.5661,-1.50515,-14.5661	1/2:74:0,47,27:0:0:47,27:1642,957:-194.997,-77.3677,-63.2193,-117.966,0,-109.838	1/1:42:0,42,0:0:0:42,0:1466,0:-117.968,-12.6433,0,-117.968,-12.6433,-117.968	1/1:69:0,69,0:0:0:69,0:2424,0:-194.408,-20.7711,0,-194.408,-20.7711,-194.408	1/1:47:0,46,1:0:0:46,1:1607,36:-133.294,-13.8474,0,-130.37,-10.5654,-130.069	1/1:61:0,60,0:0:0:60,0:2121,0:-173.259,-18.0618,0,-173.259,-18.0618,-173.259	1/1:122:0,121,0:0:0:121,0:4280,0:-354.723,-36.4246,0,-354.723,-36.4246,-354.723	1/2:94:0,46,48:0:0:46,48:1633,1688:-259.735,-136.925,-123.078,-123.149,0,-108.7	1/1:146:0,145,0:0:0:145,0:5103,0:-427.811,-43.6494,0,-427.811,-43.6494,-427.811	1/1:103:0,103,0:0:0:103,0:3637,0:-302.338,-31.0061,0,-302.338,-31.0061,-302.338	1/2:99:0,56,43:0:0:56,43:1968,1529:-272.557,-124.406,-107.548,-148.493,0,-135.549	1/1:142:0,141,0:0:0:141,0:5006,0:-412.075,-42.4452,0,-412.075,-42.4452,-412.075	1/1:10:0,10,0:0:0:10,0:354,0:-30.1108,-3.0103,0,-30.1108,-3.0103,-30.1108	1/1:83:0,83,0:0:0:83,0:2899,0:-244.831,-24.9855,0,-244.831,-24.9855,-244.831	1/1:18:0,18,0:0:0:18,0:635,0:-53.1542,-5.41854,0,-53.1542,-5.41854,-53.1542	1/2:17:0,14,3:0:0:14,3:492,102:-46.2231,-8.55819,-4.34377,-38.0018,0,-37.0987	1/1:82:0,82,0:0:0:82,0:2911,0:-229.812,-24.6845,0,-229.812,-24.6845,-229.812	1/1:30:0,30,0:0:0:30,0:1056,0:-89.2975,-9.0309,0,-89.297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chr11	30440864	.	GCT	ACT	177113	PASS	AB=0.498409;ABP=3.12775;AC=139;AF=0.739362;AN=188;AO=7107;CIGAR=1X2M;DP=9827;DPB=9827.33;DPRA=0;EPP=4338.71;EPPR=837.618;GTI=0;LEN=1;MEANALT=1.23404;MQM=59.9782;MQMR=59.9614;NS=94;NUMALT=1;ODDS=2.78398;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=249910;QR=93138;RO=2691;RPL=1670;RPP=4338.71;RPPR=837.618;RPR=5437;RUN=1;SAF=7107;SAP=15435.7;SAR=0;SRF=2691;SRP=5846.44;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:31:0,31:0:0:31:1074:-96.964,-9.33193,0	1/1:135:1,134:1:36:134:4716:-420.999,-37.0408,0	0/1:190:103,86:103:3555:86:3043:-216.941,0,-263.005	0/1:317:135,181:135:4668:181:6357:-476.736,0,-324.807	0/1:97:43,54:43:1481:54:1924:-144.237,0,-104.379	0/1:63:30,33:30:1011:33:1154:-85.1974,0,-72.3242	1/1:107:0,107:0:0:107:3774:-339.856,-32.2102,0	0/1:138:80,57:80:2780:57:1993:-138.118,0,-208.919	0/1:103:46,57:46:1590:57:2014:-150.523,0,-112.379	1/1:112:0,112:0:0:112:3990:-359.288,-33.7154,0	0/1:53:28,24:28:982:24:826:-58.6389,0,-72.6776	1/1:76:0,76:0:0:76:2705:-243.68,-22.8783,0	0/1:99:49,49:49:1711:49:1749:-127.831,0,-124.405	1/1:83:0,83:0:0:83:2964:-266.994,-24.9855,0	1/1:95:0,95:0:0:95:3312:-298.298,-28.5979,0	1/1:89:0,89:0:0:89:3120:-281.024,-26.7917,0	0/1:92:49,42:49:1710:42:1477:-105.557,0,-126.517	0/1:97:49,48:49:1727:48:1690:-123.183,0,-126.514	1/1:64:0,64:0:0:64:2216:-199.699,-19.2659,0	1/1:95:0,95:0:0:95:3355:-302.161,-28.5979,0	0/1:183:101,82:101:3456:82:2925:-208.395,0,-256.167	1/1:51:0,51:0:0:51:1794:-161.738,-15.3525,0	0/1:62:27,35:27:951:35:1237:-92.9684,0,-67.2415	1/1:98:6,92:6:190:92:3281:-278.098,-12.0897,0	1/1:73:0,73:0:0:73:2592:-233.53,-21.9752,0	0/1:382:188,193:188:6508:193:6780:-495.343,0,-470.888	0/1:193:98,95:98:3406:95:3373:-245.688,0,-248.602	0/1:40:17,23:17:598:23:824:-62.4421,0,-42.1067	0/1:200:85,115:85:2924:115:4072:-306.459,0,-203.191	1/1:107:1,105:1:36:105:3630:-323.359,-28.6158,0	1/1:127:4,123:4:136:123:4334:-377.66,-25.6559,0	0/1:12:4,8:4:136:8:280:-21.9264,0,-8.9626	0/1:19:5,14:5:178:14:504:-39.9785,0,-10.6491	0/1:6:5,1:5:170:1:36:-1.79209,0,-13.8278	0/1:10:6,4:6:205:4:144:-10.3033,0,-15.7738	1/1:26:0,26:0:0:26:902:-81.4903,-7.82678,0	1/1:213:0,213:0:0:213:7525:-677.296,-64.1194,0	1/1:229:0,229:0:0:229:7999:-719.932,-68.9359,0	0/1:82:44,38:44:1562:38:1353:-97.3839,0,-116.188	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:227:122,104:122:4185:104:3603:-256.16,0,-308.525	1/1:79:0,79:0:0:79:2752:-247.891,-23.7814,0	1/1:71:0,65:0:0:65:2264:-203.658,-19.567,0	1/1:75:0,75:0:0:75:2635:-237.394,-22.5773,0	1/1:67:0,67:0:0:67:2343:-211.126,-20.169,0	1/1:84:0,84:0:0:84:2932:-264.109,-25.2865,0	0/1:150:83,67:83:2799:67:2337:-165.428,0,-206.993	1/1:222:0,222:0:0:222:7684:-691.605,-66.8287,0	1/1:67:0,67:0:0:67:2374:-213.915,-20.169,0	0/1:162:78,84:78:2697:84:2966:-218.405,0,-194.198	1/1:149:0,147:0:0:147:5153:-463.552,-44.2514,0	1/1:10:0,10:0:0:10:341:-31.0178,-3.0103,0	1/1:123:0,123:0:0:123:4340:-390.774,-37.0267,0	1/1:25:0,25:0:0:25:866:-78.2514,-7.52575,0	0/1:41:26,15:26:892:15:540:-36.5943,0,-68.2471	1/1:153:1,149:1:36:149:5189:-463.574,-41.9069,0	1/1:62:3,59:3:108:59:2032:-173.072,-8.58869,0	0/1:16:10,6:10:343:6:197:-13.2348,0,-26.3829	1/1:14:0,14:0:0:14:481:-43.6151,-4.21442,0	0/1:40:19,21:19:649:21:715:-52.621,0,-46.6866	1/1:142:1,140:1:36:140:4996:-446.189,-39.2068,0	0/1:24:18,6:18:644:6:216:-12.5658,0,-51.0661	0/1:222:99,121:99:3410:121:4215:-312.994,0,-240.522	0/1:191:91,100:91:3214:100:3542:-261.456,0,-231.986	0/1:63:39,24:39:1326:24:860:-58.7569,0,-100.668	0/1:78:39,39:39:1375:39:1342:-97.5916,0,-100.568	1/1:202:1,200:1:36:200:6939:-621.056,-57.1935,0	1/1:90:0,90:0:0:90:3167:-285.253,-27.0927,0	0/1:29:13,16:13:428:16:572:-43.0836,0,-30.1056	0/1:75:27,48:27:970:48:1724:-132.868,0,-65.0405	0/1:116:67,49:67:2304:49:1752:-123.045,0,-172.697	0/1:14:5,9:5:175:9:309:-23.9263,0,-11.879	1/1:105:0,105:0:0:105:3742:-336.978,-31.6082,0	0/1:46:26,20:26:910:20:712:-50.5393,0,-68.3677	0/1:167:71,96:71:2445:96:3371:-253.325,0,-170.032	1/1:158:0,158:0:0:158:5592:-503.403,-47.5627,0	0/1:144:72,72:72:2445:72:2444:-176.858,0,-176.955	1/1:142:0,141:0:0:141:4928:-443.418,-42.4452,0	0/1:27:12,15:12:418:15:508:-37.9122,0,-29.8248	0/1:123:57,66:57:1977:66:2334:-173.281,0,-141.176	1/1:90:0,90:0:0:90:3152:-283.902,-27.0927,0	0/1:281:163,118:163:5658:118:4182:-291.97,0,-424.76	0/1:117:66,51:66:2294:51:1832:-129.94,0,-171.499	0/1:91:44,47:44:1542:47:1664:-122.654,0,-111.677	1/1:122:0,121:0:0:121:4296:-386.454,-36.4246,0	1/1:128:4,124:4:144:124:4426:-385.195,-25.2182,0	1/1:46:0,46:0:0:46:1640:-147.889,-13.8474,0	0/1:84:43,41:43:1465:41:1442:-104.785,0,-106.852	0/1:96:45,51:45:1588:51:1828:-135.902,0,-114.311	0/1:64:27,36:27:913:36:1228:-91.4896,0,-63.1517	0/1:124:59,65:59:2039:65:2284:-168.487,0,-146.451	0/1:93:55,37:55:1930:37:1286:-87.9825,0,-145.921	1/1:125:0,125:0:0:125:4329:-389.517,-37.6288,0	1/1:118:1,116:1:36:116:4130:-368.284,-31.9821,0
chr11	30440867	.	G	T	43314.3	PASS	AB=0.479282;ABP=23.1649;AC=49;AF=0.260638;AN=188;AO=2614;CIGAR=1X;DP=10107;DPB=10107;DPRA=1.16573;EPP=5635.89;EPPR=15545.5;GTI=0;LEN=1;MEANALT=1.08333;MQM=59.9614;MQMR=59.9804;NS=94;NUMALT=1;ODDS=7.74033;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=93344;QR=267714;RO=7482;RPL=2609;RPP=5635.89;RPPR=15545.5;RPR=5;RUN=1;SAF=2614;SAP=5679.24;SAR=0;SRF=7482;SRP=16250;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:34:34,0:34:1216:0:0:0,-10.235,-109.747	0/0:147:146,1:146:5235:1:36:0,-40.6531,-467.688	0/1:193:91,102:91:3245:102:3654:-270.963,0,-234.172	0/1:323:189,134:189:6775:134:4778:-332.943,0,-512.588	0/1:98:55,43:55:1968:43:1532:-108.672,0,-147.894	0/1:60:34,26:34:1208:26:936:-66.4953,0,-90.9643	0/0:112:111,1:111:3956:1:36:0,-30.1171,-352.632	0/1:139:59,80:59:2096:80:2872:-216.873,0,-147.067	0/1:108:64,44:64:2279:44:1580:-109.98,0,-172.86	0/0:115:115,0:115:4115:0:0:0,-34.6184,-370.534	0/1:55:27,27:27:972:27:972:-71.2209,0,-71.2209	0/0:77:77,0:77:2741:0:0:0,-23.1793,-246.928	0/1:99:53,46:53:1904:46:1652:-119.158,0,-141.836	0/0:85:85,0:85:3044:0:0:0,-25.5875,-274.19	0/0:103:103,0:103:3700:0:0:0,-31.0061,-333.201	0/0:91:91,0:91:3245:0:0:0,-27.3937,-292.27	0/1:96:48,48:48:1720:48:1696:-124.024,0,-126.187	0/1:100:52,48:52:1868:48:1724:-125.342,0,-138.296	0/0:70:70,0:70:2507:0:0:0,-21.0721,-225.882	0/0:97:97,0:97:3461:0:0:0,-29.1999,-311.696	0/1:180:83,97:83:2980:97:3447:-256.256,0,-214.246	0/0:57:57,0:57:2032:0:0:0,-17.1587,-183.153	0/1:68:41,27:41:1472:27:964:-66.6068,0,-112.305	0/0:100:95,5:95:3404:5:180:0,-13.5509,-290.022	0/0:80:79,0:79:2823:0:0:0,-23.7814,-253.949	0/1:384:202,182:202:7238:182:6514:-470.748,0,-535.875	0/1:196:101,95:101:3620:95:3388:-246.126,0,-267.003	0/1:43:26,17:26:932:17:612:-42.4691,0,-71.2546	0/1:199:118,81:118:4224:81:2892:-200.612,0,-320.435	0/0:117:115,2:115:4101:2:61:0,-29.4273,-363.482	0/0:135:131,4:131:4684:4:140:0,-27.6945,-408.777	0/1:12:8,4:8:288:4:144:-9.70126,0,-22.655	0/1:20:15,5:15:540:5:170:-9.61289,0,-42.9159	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	0/1:9:4,5:4:144:5:176:-13.4757,0,-10.6043	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:221:221,0:221:7916:0:0:0,-66.5276,-712.461	0/0:246:246,0:246:8823:0:0:0,-74.0534,-794.044	0/1:82:39,42:39:1381:42:1503:-110.821,0,-99.8437	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:228:108,120:108:3872:120:4271:-315.933,0,-280.04	0/0:83:83,0:83:2965:0:0:0,-24.9855,-267.07	0/0:77:76,1:76:2728:1:36:0,-19.581,-242.164	0/0:75:75,0:75:2696:0:0:0,-22.5772,-242.884	0/0:70:70,0:70:2511:0:0:0,-21.0721,-226.241	0/0:92:92,0:92:3283:0:0:0,-27.6948,-295.69	0/1:152:72,80:72:2584:80:2864:-212.239,0,-187.052	0/0:236:234,0:234:8375:0:0:0,-70.441,-753.395	0/0:73:73,0:73:2611:0:0:0,-21.9752,-235.237	0/1:161:87,74:87:3124:74:2645:-189.825,0,-232.92	0/0:155:155,0:155:5547:0:0:0,-46.6596,-499.354	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/0:129:128,0:128:4595:0:0:0,-38.5318,-413.353	0/0:25:25,0:25:900:0:0:0,-7.52575,-81.321	0/1:42:16,26:16:561:26:919:-70.3829,0,-38.1739	0/0:160:158,1:158:5642:1:36:0,-44.6253,-504.3	0/0:67:64,3:64:2281:3:102:0,-10.6526,-196.034	0/1:17:7,10:7:252:10:360:-27.6268,0,-17.9114	0/0:14:14,0:14:504:0:0:0,-4.21442,-45.6981	0/1:39:21,17:21:739:17:604:-42.9956,0,-55.1386	0/0:143:142,1:142:5100:1:36:0,-39.449,-455.543	0/1:25:7,18:7:252:18:648:-51.1261,0,-15.5032	0/1:221:126,95:126:4488:95:3381:-237.917,0,-337.561	0/1:196:108,88:108:3868:88:3154:-225.083,0,-289.277	0/1:62:24,38:24:864:38:1356:-103.677,0,-59.4187	0/1:75:40,35:40:1428:35:1256:-90.768,0,-106.24	0/0:207:206,1:206:7361:1:36:0,-58.7149,-658.87	0/0:95:95,0:95:3384:0:0:0,-28.5978,-304.774	0/1:29:16,13:16:576:13:468:-33.7298,0,-43.4451	0/1:75:49,26:49:1741:26:932:-61.6216,0,-134.395	0/1:117:51,66:51:1824:66:2368:-178.158,0,-129.221	0/1:15:10,5:10:356:5:180:-12.0366,0,-27.8658	0/0:103:103,0:103:3679:0:0:0,-31.0061,-331.313	0/1:50:24,26:24:849:26:936:-69.508,0,-61.6563	0/1:167:99,66:99:3496:66:2338:-160.649,0,-264.714	0/0:163:163,0:163:5837:0:0:0,-49.0679,-525.44	0/1:146:78,68:78:2804:68:2398:-172.125,0,-208.649	0/0:142:142,0:142:5083:0:0:0,-42.7463,-457.613	0/1:28:16,12:16:572:12:424:-30.0676,0,-43.3846	0/1:125:69,56:69:2476:56:2008:-143.365,0,-185.455	0/0:95:95,0:95:3396:0:0:0,-28.5978,-305.855	0/1:291:129,162:129:4628:162:5768:-431.635,0,-329.082	0/1:117:53,64:53:1887:64:2283:-170.511,0,-134.887	0/1:93:49,44:49:1751:44:1580:-114.496,0,-129.878	0/0:126:126,0:126:4508:0:0:0,-37.9298,-405.886	0/0:130:127,3:127:4560:3:108:0,-29.0587,-400.485	0/0:48:48,0:48:1728:0:0:0,-14.4494,-155.805	0/1:83:41,42:41:1476:42:1512:-111.381,0,-108.151	0/1:98:53,45:53:1885:45:1599:-114.699,0,-140.426	0/1:67:41,26:41:1463:26:936:-64.3905,0,-111.796	0/1:122:66,56:66:2364:56:2000:-143.548,0,-176.288	0/1:95:40,55:40:1436:55:1963:-148.347,0,-100.94	0/0:135:135,0:135:4844:0:0:0,-40.639,-436.113	0/0:129:128,0:128:4583:0:0:0,-38.5318,-412.274
chr11	30506108	.	TT	CT,CA	350904	PASS	AB=0.514989,0.482774;ABP=20.4559,26.0522;AC=138,50;AF=0.734043,0.265957;AN=188;AO=12919,4366;CIGAR=1X1M,2X;DP=17312;DPB=17312;DPRA=0,1.01446;EPP=27934.8,9483.66;EPPR=13.8677;GTI=3;LEN=1,2;MEANALT=1.84043,2.23729;MQM=47.3653,34.2485;MQMR=60;NS=94;NUMALT=2;ODDS=0.50821;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=460307,154607;QR=178;RO=5;RPL=14,0;RPP=27934.8,9483.66;RPPR=13.8677;RPR=12905,4366;RUN=1,1;SAF=12919,4366;SAP=28056.3,9483.66;SAR=0,0;SRF=5;SRP=13.8677;SRR=0;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:128:0,128,0:0:0:128,0:4542,0:-405.458,-38.5318,0,-405.458,-38.5318,-405.458	1/1:289:0,288,0:0:0:288,0:10262,0:-917.526,-86.6966,0,-917.526,-86.6966,-917.526	1/2:245:0,142,103:0:0:142,103:5047,3673:-675.479,-266.955,-224.209,-408.858,0,-377.852	1/2:535:0,304,229:0:0:304,229:10852,8114:-1453.56,-578.474,-486.961,-875.129,0,-806.193	1/2:184:0,99,85:0:0:99,85:3523,2991:-499.69,-214.87,-185.068,-285.153,0,-259.565	1/2:135:0,59,76:0:0:59,76:2096,2710:-364.851,-195.289,-177.529,-169.9,0,-147.021	1/1:363:0,363,0:0:0:363,0:12943,0:-1153.27,-109.274,0,-1153.27,-109.274,-1153.27	1/2:276:1,145,127:1:36:145,127:5140,4503:-732.925,-317.962,-277.251,-412.322,0,-377.029	1/2:205:0,93,112:0:0:93,112:3316,3957:-553.656,-285.483,-257.487,-268.509,0,-234.794	1/1:236:0,236,0:0:0:236,0:8418,0:-750.057,-71.0431,0,-750.057,-71.0431,-750.057	1/2:59:0,29,30:0:0:29,30:1038,1078:-160.907,-77.2737,-68.5438,-83.9699,0,-74.939	1/1:92:0,92,0:0:0:92,0:3252,0:-290.644,-27.6948,0,-290.644,-27.6948,-290.644	1/2:95:0,55,40:0:0:55,40:1953,1433:-262.709,-105.05,-88.4935,-157.995,0,-145.954	1/1:63:0,63,0:0:0:63,0:2254,0:-201.162,-18.9649,0,-201.162,-18.9649,-201.162	1/1:104:0,104,0:0:0:104,0:3713,0:-331.29,-31.3071,0,-331.29,-31.3071,-331.29	1/1:78:0,78,0:0:0:78,0:2779,0:-247.781,-23.4803,0,-247.781,-23.4803,-247.781	1/2:74:0,37,37:0:0:37,37:1320,1328:-204.231,-97.6351,-86.497,-106.936,0,-95.7976	1/2:75:0,30,45:0:0:30,45:1068,1587:-200.39,-113.926,-104.895,-86.8018,0,-73.2555	1/1:44:0,44,0:0:0:44,0:1578,0:-140.899,-13.2453,0,-140.899,-13.2453,-140.899	1/1:601:0,600,0:0:0:600,0:21359,0:-1899.37,-180.618,0,-1899.37,-180.618,-1899.37	1/2:341:0,202,139:0:0:202,139:7167,4929:-936.626,-358.823,-298.014,-578.136,0,-536.293	1/1:209:0,209,0:0:0:209,0:7444,0:-662.054,-62.9153,0,-662.054,-62.9153,-662.054	1/2:203:2,105,96:2:70:105,96:3750,3376:-531.935,-231.167,-205.255,-295.654,0,-272.45	1/1:262:0,252,10:0:0:252,10:8979,360:-800.535,-75.8596,0,-774.172,-49.1683,-771.161	1/1:145:0,144,0:0:0:144,0:5124,0:-457.634,-43.3483,0,-457.634,-43.3483,-457.634	1/2:540:0,294,244:0:0:294,244:10462,8649:-1459.94,-616.529,-528.026,-843.447,0,-769.996	1/2:464:1,233,230:1:36:233,230:8319,8167:-1260.63,-590.501,-523.299,-667.474,0,-601.174	1/2:58:0,33,25:0:0:33,25:1175,885:-159.983,-64.9448,-55.0108,-95.373,0,-87.8473	1/2:671:0,318,352:0:0:318,352:11354,12528:-1804.96,-889.756,-794.029,-915.331,0,-809.368	1/1:225:0,218,7:0:0:218,7:7769,252:-692.354,-65.6245,0,-674.011,-46.9563,-671.904	1/1:213:0,208,5:0:0:208,5:7424,173:-660.58,-62.6142,0,-648.228,-49.953,-646.723	1/2:5:0,2,3:0:0:2,3:72,108:-14.0294,-8.18615,-7.58409,-6.18746,0,-5.28437	1/2:9:0,3,6:0:0:3,6:108,216:-23.0412,-14.2743,-13.3712,-9.10253,0,-7.29635	1/2:4:0,2,2:0:0:2,2:72,70:-11.3295,-5.47066,-4.8686,-6.1976,0,-5.59554	2/2:18:0,1,17:0:0:1,17:36,589:-47.5249,-44.6025,-44.3014,-5.11751,-1.83977,0	1/1:6:0,6,0:0:0:6,0:216,0:-19.6832,-1.80618,0,-19.6832,-1.80618,-19.6832	1/1:247:0,246,0:0:0:246,0:8784,0:-781.744,-74.0534,0,-781.744,-74.0534,-781.744	1/1:285:0,285,0:0:0:285,0:10183,0:-909.341,-85.7936,0,-909.341,-85.7936,-909.341	1/2:66:0,35,31:0:0:35,31:1249,1114:-181.772,-80.7568,-70.2207,-101.353,0,-92.0206	1/1:4:0,4,0:0:0:4,0:144,0:-13.24,-1.20412,0,-13.24,-1.20412,-13.24	1/2:341:0,156,185:0:0:156,185:5556,6549:-923.032,-474.838,-427.878,-448.531,0,-392.84	1/1:37:0,37,0:0:0:37,0:1328,0:-119.009,-11.1381,0,-119.009,-11.1381,-119.009	1/1:334:0,333,0:0:0:333,0:11893,0:-1060.91,-100.243,0,-1060.91,-100.243,-1060.91	1/1:108:0,108,0:0:0:108,0:3869,0:-345.031,-32.5112,0,-345.031,-32.5112,-345.031	1/1:97:0,97,0:0:0:97,0:3390,0:-301.592,-29.1999,0,-301.592,-29.1999,-301.592	1/1:184:0,184,0:0:0:184,0:6590,0:-586.645,-55.3895,0,-586.645,-55.3895,-586.645	1/2:283:0,151,132:0:0:151,132:5385,4672:-776.692,-340.483,-295.028,-436.544,0,-396.808	1/1:363:0,363,0:0:0:363,0:12905,0:-1149.11,-109.274,0,-1149.11,-109.274,-1149.11	1/1:249:0,249,0:0:0:249,0:8919,0:-795.394,-74.9565,0,-795.394,-74.9565,-795.394	1/2:213:0,117,96:0:0:117,96:4128,3420:-571.753,-239.053,-203.832,-333.028,0,-304.129	1/1:341:0,341,0:0:0:341,0:12076,0:-1075.91,-102.651,0,-1075.91,-102.651,-1075.91	1/1:9:0,9,0:0:0:9,0:320,0:-28.9013,-2.70927,0,-28.9013,-2.70927,-28.9013	1/1:315:0,315,0:0:0:315,0:11249,0:-1005.87,-94.8245,0,-1005.87,-94.8245,-1005.87	1/1:82:0,81,1:0:0:81,1:2893,23:-257.723,-24.3834,0,-255.985,-22.4175,-255.684	1/2:17:0,9,8:0:0:9,8:316,288:-46.8928,-21.2887,-18.5795,-25.9403,0,-23.5321	1/1:264:0,263,0:0:0:263,0:9336,0:-83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chr11	30626965	.	CC	AT,CT	180887	PASS	AB=0.548371,0.449142;ABP=84.7286,93.3475;AC=140,48;AF=0.744681,0.255319;AN=188;AO=6439,1832;CIGAR=2X,1M1X;DP=8297;DPB=8297;DPRA=0,1.00753;EPP=12236.8,3468.95;EPPR=3.0103;GTI=2;LEN=2,1;MEANALT=1.84043,2.17544;MQM=59.9652,59.9929;MQMR=60;NS=94;NUMALT=2;ODDS=0.820865;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=222464,64956;QR=61;RO=2;RPL=6231,1771;RPP=12236.8,3468.95;RPPR=3.0103;RPR=208,61;RUN=1,1;SAF=0,0;SAP=13985.1,3981.15;SAR=6439,1832;SRF=0;SRP=7.35324;SRR=2;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:72:0,71,0:0:0:71,0:2452,0:-220.555,-21.3731,0,-220.555,-21.3731,-220.555	1/1:71:0,71,0:0:0:71,0:2442,0:-220.032,-21.3731,0,-220.032,-21.3731,-220.032	1/2:127:2,76,49:2:61:76,49:2637,1714:-348.346,-134.6,-116.606,-209.506,0,-199.641	1/2:270:0,154,115:0:0:154,115:5361,4087:-769.065,-333.149,-286.79,-436.017,0,-401.399	1/2:40:0,25,15:0:0:25,15:868,528:-113.894,-43.3359,-35.8102,-70.9077,0,-66.3922	1/2:13:0,6,7:0:0:6,7:216,248:-38.1841,-20.557,-18.7508,-17.9843,0,-15.8771	1/1:73:0,71,0:0:0:71,0:2481,0:-223.288,-21.3731,0,-223.288,-21.3731,-223.288	1/2:153:0,76,76:0:0:76,76:2630,2672:-431.333,-217.615,-194.736,-213.835,0,-190.957	1/2:80:0,32,48:0:0:32,48:1090,1720:-229.053,-140.635,-131.002,-88.7665,0,-74.317	1/1:86:0,86,0:0:0:86,0:2997,0:-269.96,-25.8886,0,-269.96,-25.8886,-269.96	1/2:40:0,27,13:0:0:27,13:940,455:-113.803,-37.3686,-29.2408,-76.784,0,-72.8706	1/1:95:0,95,0:0:0:95,0:3288,0:-296.141,-28.5979,0,-296.141,-28.5979,-296.141	1/2:71:0,49,22:0:0:49,22:1723,777:-203.877,-63.6277,-48.8772,-140.602,0,-133.979	1/1:68:0,68,0:0:0:68,0:2375,0:-214.005,-20.47,0,-214.005,-20.47,-214.005	1/1:77:0,77,0:0:0:77,0:2716,0:-244.683,-23.1793,0,-244.683,-23.1793,-244.683	1/1:56:0,56,0:0:0:56,0:1965,0:-177.122,-16.8577,0,-177.122,-16.8577,-177.122	1/2:43:0,22,20:0:0:22,20:769,702:-119.769,-57.2093,-50.5867,-62.634,0,-56.6134	1/2:20:0,9,11:0:0:9,11:311,392:-57.5726,-32.3087,-29.5995,-25.6142,0,-22.3028	1/1:44:0,44,0:0:0:44,0:1518,0:-136.907,-13.2453,0,-136.907,-13.2453,-136.907	1/1:175:0,171,3:0:0:171,3:5981,108:-538.07,-51.4761,0,-529.257,-42.5815,-528.354	1/2:40:0,27,13:0:0:27,13:961,464:-116.5,-38.1818,-30.054,-78.6748,0,-74.7614	1/1:148:0,148,0:0:0:148,0:5149,0:-463.557,-44.5524,0,-463.557,-44.5524,-463.557	1/2:114:0,62,52:0:0:62,52:2125,1848:-323.446,-150.947,-132.283,-172.849,0,-157.195	1/1:97:0,89,8:0:0:89,8:3108,269:-279.609,-26.7917,0,-257.818,-4.66378,-255.41	1/1:114:0,114,0:0:0:114,0:3983,0:-358.661,-34.3174,0,-358.661,-34.3174,-358.661	1/2:198:0,110,87:0:0:110,87:3769,3079:-556.85,-250.9,-217.786,-306.047,0,-279.858	1/2:298:0,155,143:0:0:155,143:5296,5087:-844.681,-414.927,-368.267,-430.102,0,-387.055	1/2:27:0,16,11:0:0:16,11:565,396:-78.6775,-32.6714,-27.8549,-46.3631,0,-43.0517	1/2:336:0,176,159:0:0:176,159:6114,5645:-956.984,-459.947,-406.966,-497.028,0,-449.164	1/1:90:0,87,2:0:0:87,2:3006,68:-270.465,-26.1896,0,-264.949,-20.6,-264.347	1/1:73:0,72,1:0:0:72,1:2474,36:-222.551,-21.6742,0,-219.613,-18.3769,-219.312	1/1:9:0,9,0:0:0:9,0:299,0:-27.2321,-2.70927,0,-27.2321,-2.70927,-27.2321	1/2:22:0,14,8:0:0:14,8:500,284:-64.2615,-23.4951,-19.2807,-41.122,0,-38.7137	1/2:11:0,8,3:0:0:8,3:262,104:-29.9491,-8.79971,-6.39147,-21.4907,0,-20.5876	1/2:4:0,3,1:0:0:3,1:108,36:-12.1095,-3.29724,-2.39415,-9.17208,0,-8.87105	1/1:15:0,15,0:0:0:15,0:534,0:-48.3927,-4.51545,0,-48.3927,-4.51545,-48.3927	1/1:174:0,174,0:0:0:174,0:5974,0:-537.777,-52.3792,0,-537.777,-52.3792,-537.777	1/1:91:0,90,0:0:0:90,0:3090,0:-277.966,-27.0927,0,-277.966,-27.0927,-277.966	1/2:31:0,21,10:0:0:21,10:702,360:-86.5507,-29.734,-23.4124,-57.1683,0,-54.158	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:118:0,52,66:0:0:52,66:1780,2319:-333.574,-189.102,-173.448,-144.819,0,-124.951	1/1:41:0,41,0:0:0:41,0:1442,0:-130.073,-12.3422,0,-130.073,-12.3422,-130.073	1/1:139:0,139,0:0:0:139,0:4771,0:-429.552,-41.8432,0,-429.552,-41.8432,-429.552	1/1:41:0,41,0:0:0:41,0:1428,0:-128.812,-12.3422,0,-128.812,-12.3422,-128.812	1/1:66:0,62,0:0:0:62,0:2076,0:-186.832,-18.6639,0,-186.832,-18.6639,-186.832	1/1:70:0,70,0:0:0:70,0:2419,0:-217.962,-21.0721,0,-217.962,-21.0721,-217.962	1/2:93:0,53,39:0:0:53,39:1758,1396:-256.136,-113.946,-97.9917,-142.283,0,-130.543	1/1:188:0,185,0:0:0:185,0:6344,0:-570.753,-55.6906,0,-570.753,-55.6906,-570.753	1/1:103:0,103,0:0:0:103,0:3569,0:-321.42,-31.0061,0,-321.42,-31.0061,-321.42	1/2:107:0,60,47:0:0:60,47:2089,1680:-307.2,-137.339,-119.277,-170.214,0,-156.066	1/1:133:0,133,0:0:0:133,0:4632,0:-417.048,-40.037,0,-417.048,-40.037,-417.048	1/1:4:0,4,0:0:0:4,0:142,0:-13.1292,-1.20412,0,-13.1292,-1.20412,-13.1292	1/1:144:0,143,0:0:0:143,0:4907,0:-441.535,-43.0473,0,-441.535,-43.0473,-441.535	1/1:58:0,58,0:0:0:58,0:2006,0:-180.794,-17.4597,0,-180.794,-17.4597,-180.794	1/2:11:0,5,5:0:0:5,5:165,180:-28.0129,-14.6871,-13.1819,-13.3145,0,-11.8093	1/1:217:0,215,2:0:0:215,2:7432,68:-668.331,-64.7215,0,-662.815,-58.8658,-662.213	1/1:77:0,76,0:0:0:76,0:2633,0:-237.006,-22.8783,0,-237.006,-22.8783,-237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chr11	30641746	.	CTCGCTGC	CTCACTGC,GTCACTGT	201786	PASS	AB=0.550919,0.436324;ABP=107.166,165.892;AC=137,51;AF=0.728723,0.271277;AN=188;AO=7413,2027;CIGAR=3M1X4M,1X2M1X3M1X;DP=9552;DPB=9551.88;DPRA=0,1.00786;EPP=16100.1,4404.58;EPPR=16.0391;GTI=4;LEN=1,8;MEANALT=2.59574,3;MQM=59.9763,59.5146;MQMR=60;NS=94;NUMALT=2;ODDS=0.452207;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=264087,71549;QR=201;RO=6;RPL=0,0;RPP=16100.1,4404.58;RPPR=16.0391;RPR=7413,2027;RUN=1,1;SAF=7413,2027;SAP=16100.1,4404.58;SAR=0,0;SRF=6;SRP=16.0391;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:58:0,57,0:0:0:57,0:2028,0:-182.433,-17.1587,0,-182.433,-17.1587,-182.433	1/1:93:0,92,0:0:0:92,0:3250,0:-292.433,-27.6948,0,-292.433,-27.6948,-292.433	1/2:185:0,102,83:0:0:102,83:3637,2925:-534.802,-238.337,-207.632,-296.819,0,-271.834	1/2:192:0,124,67:0:0:124,67:4433,2383:-555.741,-194.284,-156.956,-361.542,0,-341.373	1/2:52:0,31,19:0:0:31,19:1104,670:-144.532,-54.5474,-45.2155,-89.9791,0,-84.2595	1/2:43:0,18,24:0:0:18,24:648,851:-122.293,-69.4154,-63.9968,-52.9681,0,-45.7434	1/1:115:0,114,0:0:0:114,0:4075,0:-366.577,-34.3174,0,-366.577,-34.3174,-366.577	1/2:115:0,74,39:0:0:74,39:2640,1384:-328.067,-112.847,-90.5708,-215.333,0,-203.593	1/2:122:0,64,56:0:0:64,56:2268,1991:-346.947,-162.271,-143.005,-184.695,0,-167.838	1/1:111:0,111,0:0:0:111,0:3945,0:-355.243,-33.4143,0,-355.243,-33.4143,-355.243	1/2:54:0,22,30:0:0:22,30:792,1046:-149.616,-84.9872,-78.3646,-64.6467,0,-55.6158	1/1:111:0,111,0:0:0:111,0:3971,0:-357.58,-33.4143,0,-357.58,-33.4143,-357.58	1/2:98:0,47,50:0:0:47,50:1684,1773:-281.75,-144.407,-130.259,-137.349,0,-122.298	1/1:46:0,46,0:0:0:46,0:1636,0:-147.529,-13.8474,0,-147.529,-13.8474,-147.529	1/1:69:0,69,0:0:0:69,0:2467,0:-222.239,-20.7711,0,-222.239,-20.7711,-222.239	1/1:42:0,41,0:0:0:41,0:1464,0:-131.696,-12.3422,0,-131.696,-12.3422,-131.696	1/2:23:0,13,10:0:0:13,10:468,355:-67.4616,-29.2723,-25.3589,-38.5463,0,-35.536	1/2:46:0,24,22:0:0:24,22:864,773:-133.734,-63.2317,-56.007,-70.8578,0,-64.2352	1/1:37:0,37,0:0:0:37,0:1320,0:-119.102,-11.1381,0,-119.102,-11.1381,-119.102	1/1:369:0,368,1:0:0:368,1:13077,36:-1176.38,-110.779,0,-1173.45,-107.482,-1173.15	1/2:149:0,79,68:0:0:79,68:2804,2391:-422.946,-194.478,-170.697,-228.48,0,-208.01	1/1:169:0,164,0:0:0:164,0:5834,0:-524.814,-49.3689,0,-524.814,-49.3689,-524.814	1/2:88:0,59,27:0:0:59,27:2093,944:-247.311,-76.7848,-59.0241,-170.518,0,-162.39	1/2:62:0,54,8:0:0:54,8:1940,288:-182.12,-23.8592,-7.60355,-158.621,0,-156.212	1/1:146:0,145,0:0:0:145,0:5177,0:-465.71,-43.6494,0,-465.71,-43.6494,-465.71	1/2:201:1,123,73:1:36:123,73:4381,2569:-562.958,-206.175,-172.086,-354.147,0,-335.109	1/2:287:0,162,121:0:0:162,121:5752,4248:-814.381,-345.705,-296.939,-468.719,0,-432.295	1/2:47:0,24,23:0:0:24,23:852,817:-136.345,-66.9242,-59.6995,-69.7757,0,-62.852	1/2:262:0,159,97:0:0:159,97:5650,3440:-740.484,-280.081,-232.217,-460.401,0,-431.202	1/1:131:0,128,2:0:0:128,2:4527,72:-407.258,-38.5318,0,-401.383,-32.6171,-400.781	1/1:121:0,118,0:0:0:118,0:4200,0:-377.853,-35.5215,0,-377.853,-35.5215,-377.853	1/2:7:0,5,1:0:0:5,1:180,36:-17.6872,-2.97399,-1.46884,-14.748,0,-14.447	1/2:30:0,22,7:0:0:22,7:784,250:-84.2806,-20.3764,-13.7537,-63.9016,0,-61.7944	1/1:9:0,9,0:0:0:9,0:324,0:-29.5059,-2.70927,0,-29.5059,-2.70927,-29.5059	1/2:13:0,9,4:0:0:9,4:324,142:-38.3617,-11.9214,-9.21213,-26.7966,0,-25.5925	1/1:30:0,30,0:0:0:30,0:1072,0:-96.7925,-9.0309,0,-96.7925,-9.0309,-96.7925	1/1:203:0,200,0:0:0:200,0:7140,0:-642.337,-60.206,0,-642.337,-60.206,-642.337	1/1:127:0,125,0:0:0:125,0:4425,0:-398.093,-37.6288,0,-398.093,-37.6288,-398.093	1/2:35:0,18,16:0:0:18,16:644,566:-98.569,-46.0508,-40.6323,-52.5596,0,-47.7431	1/1:13:0,12,0:0:0:12,0:428,0:-38.5268,-3.61236,0,-38.5268,-3.61236,-38.5268	1/2:142:0,75,66:0:0:75,66:2675,2331:-407.888,-189.824,-167.246,-218.059,0,-198.191	1/1:42:0,42,0:0:0:42,0:1500,0:-135.295,-12.6433,0,-135.295,-12.6433,-135.295	1/1:118:0,115,0:0:0:115,0:4089,0:-367.837,-34.6185,0,-367.837,-34.6185,-367.837	1/1:58:0,58,0:0:0:58,0:2076,0:-187.093,-17.4597,0,-187.093,-17.4597,-187.093	1/1:67:1,64,0:1:33:64,0:2296,0:-203.636,-16.5794,0,-203.937,-19.2659,-206.605	1/1:152:0,147,2:0:0:147,2:5264,72:-473.534,-44.2514,0,-467.659,-38.3726,-467.057	1/2:223:0,144,75:0:0:144,75:5121,2627:-631.069,-213.734,-170.385,-417.353,0,-394.776	1/1:182:0,178,1:0:0:178,1:6311,36:-567.771,-53.5833,0,-564.834,-50.6301,-564.533	1/1:124:0,124,0:0:0:124,0:4440,0:-399.771,-37.3277,0,-399.771,-37.3277,-399.771	1/2:86:1,48,35:1:30:48,35:1712,1240:-237.912,-98.6513,-86.5991,-137.203,0,-129.064	1/1:165:0,164,0:0:0:164,0:5837,0:-525.118,-49.3689,0,-525.118,-49.3689,-525.118	1/2:5:0,4,1:0:0:4,1:144,36:-15.0469,-3.29724,-2.09312,-12.1095,0,-11.8085	1/1:272:0,271,0:0:0:271,0:9658,0:-868.961,-81.5791,0,-868.961,-81.5791,-868.961	1/1:67:0,66,0:0:0:66,0:2319,0:-208.606,-19.868,0,-208.606,-19.868,-208.606	1/2:14:0,9,5:0:0:9,5:320,168:-40.0355,-13.9453,-11.236,-26.4331,0,-24.9279	1/1:173:0,171,1:0:0:171,1:6058,35:-544.971,-51.4761,0,-542.123,-48.6334,-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chr11	30651648	.	TAATATAAAATG	TAAATATAAAATG	69264.2	PASS	AB=0.448449;ABP=173.386;AC=49;AF=0.260638;AN=188;AO=3321;CIGAR=1M1I11M;DP=14872;DPB=15163.6;DPRA=1.05065;EPP=7145.15;EPPR=24616.7;GTI=3;LEN=1;MEANALT=2.71429;MQM=59.9485;MQMR=54.9773;NS=94;NUMALT=1;ODDS=1.08088;PAIRED=0;PAIREDR=0;PAO=9.5;PQA=301;PQR=334;PRO=10.5;QA=113570;QR=375702;RO=11355;RPL=1561;RPP=28.9038;RPPR=3.5077;RPR=1760;RUN=1;SAF=1569;SAP=24.9075;SAR=1752;SRF=5708;SRP=3.72189;SRR=5647;TYPE=ins	GT:DP:AD:RO:QR:AO:QA:GL	0/0:49:48,0:48:1586:0:0:0,-14.4494,-141.258	0/0:216:211,1:211:7171:1:36:0,-60.5719,-640.012	0/1:179:79,97:79:2672:97:3343:-247.802,0,-186.883	0/1:374:211,157:211:6905:157:5315:-367.426,0,-509.371	0/1:138:88,50:88:2958:50:1697:-111.466,0,-224.699	0/1:94:37,54:37:1237:54:1847:-138.744,0,-83.7094	0/0:315:311,1:311:10202:1:36:0,-90.6681,-913.448	0/1:227:115,109:115:3851:109:3744:-269.446,0,-277.44	0/1:164:75,89:75:2492:89:3034:-223.806,0,-174.719	0/0:161:154,0:154:5169:0:0:0,-46.3586,-464.596	0/1:79:35,42:35:1091:42:1459:-108.149,0,-74.4145	0/0:109:106,0:106:3565:0:0:0,-31.9092,-320.384	0/1:107:45,62:45:1520:62:2139:-160.567,0,-104.68	0/0:133:132,0:132:4309:0:0:0,-39.736,-386.575	0/0:139:138,0:138:4601:0:0:0,-41.5421,-413.323	0/0:93:91,0:91:2989:0:0:0,-27.3937,-268.478	0/1:110:44,66:44:1523:66:2291:-173.334,0,-103.454	0/1:112:48,64:48:1639:64:2211:-165.539,0,-113.871	0/0:67:66,0:66:2277:0:0:0,-19.868,-204.664	0/0:443:438,0:438:14480:0:0:0,-131.851,-1300.92	0/1:269:148,114:148:4852:114:3897:-271.711,0,-357.095	0/0:96:94,0:94:3075:0:0:0,-28.2968,-276.428	0/1:179:95,83:95:3087:83:2857:-203.518,0,-223.506	0/0:147:141,3:141:4652:3:104:0,-33.9668,-407.589	0/0:159:159,0:159:5278:0:0:0,-47.8638,-474.551	0/1:321:232,85:232:7564:85:2903:-165.788,0,-584.398	0/1:315:178,133:178:5949:133:4547:-315.497,0,-440.485	0/1:68:31,36:31:1049:36:1245:-91.9124,0,-74.0769	0/1:285:224,55:224:7360:55:1881:-85.3179,0,-577.815	0/0:185:181,3:181:5999:3:99:0,-46.4097,-530.067	0/0:348:341,1:341:11144:1:36:0,-99.7018,-997.658	0/0:7:7,0:7:231:0:0:0,-2.10721,-21.0932	0/1:15:11,4:11:368:4:140:-8.42913,0,-28.9	0/1:4:1,3:1:31:3:89:-7.10024,0,-1.89245	0/1:5:3,2:3:103:2:72:-5.33157,0,-8.06197	0/0:10:10,0:10:349:0:0:0,-3.0103,-31.7132	0/0:334:332,0:332:10921:0:0:0,-99.942,-981.769	0/0:229:228,0:228:7592:0:0:0,-68.6348,-682.054	0/1:77:30,46:30:1031:46:1615:-122.557,0,-69.8108	0/0:9:9,0:9:280:0:0:0,-2.70927,-25.4582	0/1:289:158,128:158:5269:128:4350:-305.313,0,-385.816	0/0:49:48,0:48:1554:0:0:0,-14.4494,-139.672	0/0:225:223,0:223:7279:0:0:0,-67.1297,-653.164	0/0:139:137,0:137:4505:0:0:0,-41.2411,-405.026	0/0:118:117,0:117:3796:0:0:0,-35.2205,-341.065	0/0:149:147,0:147:4967:0:0:0,-44.2514,-446.681	0/1:218:117,98:117:3994:98:3349:-236.653,0,-294.352	0/0:257:253,0:253:8401:0:0:0,-76.1606,-754.851	0/0:174:172,0:172:5700:0:0:0,-51.7772,-512.377	0/1:237:122,114:122:4034:114:3857:-275.98,0,-290.753	0/0:215:212,0:212:6846:0:0:0,-63.8184,-615.42	0/0:10:10,0:10:331:0:0:0,-3.0103,-30.0686	0/0:179:178,0:178:6023:0:0:0,-53.5833,-540.475	0/0:97:97,0:97:3145:0:0:0,-29.1999,-283.106	0/1:5:3,2:3:100:2:68:-4.95256,0,-7.78588	0/0:244:238,1:238:7801:1:32:0,-69.0586,-697.791	0/0:80:80,0:80:2613:0:0:0,-24.0824,-234.949	0/1:4:3,1:3:102:1:36:-2.39415,0,-8.31248	0/0:28:28,0:28:914:0:0:0,-8.42884,-82.4965	0/1:138:71,62:71:2271:62:2125:-151.198,0,-163.509	0/0:168:165,0:165:5469:0:0:0,-49.6699,-491.652	0/1:9:6,3:6:192:3:108:-7.3659,0,-14.8692	0/1:156:116,35:116:3836:35:1174:-60.2516,0,-299.336	0/1:345:183,159:183:5983:159:5515:-393.209,0,-434.691	0/1:115:60,52:60:2007:52:1781:-126.571,0,-146.283	0/1:107:89,15:89:2928:15:511:-14.6972,0,-232.012	0/0:351:342,0:342:11313:0:0:0,-102.952,-1016.24	0/0:224:220,0:220:7231:0:0:0,-66.2266,-648.552	0/1:49:25,24:25:833:24:838:-60.9859,0,-60.3208	0/1:146:56,89:56:1858:89:3008:-227.021,0,-122.784	0/1:102:57,44:57:1893:44:1526:-106.878,0,-138.935	0/1:34:28,5:28:870:5:167:-5.13242,0,-67.8682	0/0:113:111,0:111:3750:0:0:0,-33.4143,-336.605	0/1:98:55,41:55:1881:41:1398:-96.7148,0,-140.105	0/1:417:242,169:242:7872:169:5675:-386.86,0,-582.602	0/0:339:337,0:337:11222:0:0:0,-101.447,-1008.23	0/1:126:63,62:63:2109:62:2097:-151.049,0,-151.715	0/0:137:136,0:136:4600:0:0:0,-40.9401,-413.256	0/1:13:6,7:6:199:7:233:-17.3809,0,-14.2892	0/1:205:98,105:98:3317:105:3563:-259.522,0,-236.463	0/1:195:80,115:80:2628:115:3838:-286.778,0,-177.322	0/1:447:230,210:230:7473:210:7215:-516.684,0,-539.003	0/1:178:91,85:91:3017:85:2973:-214.565,0,-217.999	0/1:144:79,65:79:2639:65:2242:-158.681,0,-193.748	0/0:185:184,0:184:6098:0:0:0,-55.3895,-547.152	0/0:258:253,0:253:8450:0:0:0,-76.1606,-759.42	0/0:53:53,0:53:1797:0:0:0,-15.9546,-161.769	0/1:107:52,55:52:1761:55:1856:-135.105,0,-124.657	0/1:110:46,63:46:1565:63:2103:-156.426,0,-107.927	0/1:61:24,37:24:752:37:1283:-97.407,0,-49.4615	0/1:89:43,45:43:1408:45:1538:-111.945,0,-100.04	0/1:115:43,69:43:1450:69:2438:-185.696,0,-96.725	0/0:250:246,0:246:7923:0:0:0,-74.0534,-711.008	0/0:200:195,1:195:6581:1:36:0,-55.7553,-588.222
chr11	30877841	.	CATCT	CATCG	168228	PASS	AB=0.505789;ABP=4.36794;AC=138;AF=0.734043;AN=188;AO=6473;CIGAR=4M1X;DP=8849;DPB=8849;DPRA=0;EPP=14059;EPPR=4910.54;GTI=1;LEN=1;MEANALT=2.02128;MQM=56.8214;MQMR=58.8819;NS=94;NUMALT=1;ODDS=1.60401;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=228430;QR=75951;RO=2260;RPL=2267;RPP=1264.27;RPPR=270.874;RPR=4206;RUN=1;SAF=2267;SAP=1264.27;SAR=4206;SRF=866;SRP=270.874;SRR=1394;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:47:0,46:0:0:46:1634:-146.898,-13.8474,0	1/1:85:0,82:0:0:82:2888:-258.315,-24.6845,0	0/1:184:72,109:72:2459:109:3873:-292.962,0,-166.718	0/1:123:61,62:61:1986:62:2177:-158.956,0,-141.919	0/1:58:30,27:30:1002:27:964:-69.2512,0,-72.9206	0/1:48:23,25:23:776:25:892:-65.8507,0,-55.4569	1/1:124:0,124:0:0:124:4396:-395.264,-37.3277,0	0/1:137:79,58:79:2675:58:2028:-141.092,0,-199.504	0/1:116:50,61:50:1665:61:2188:-163.103,0,-116.338	1/1:105:0,104:0:0:104:3672:-329.833,-31.3071,0	0/1:102:53,48:53:1818:48:1690:-121.523,0,-133.124	1/1:111:0,110:0:0:110:3873:-347.611,-33.1133,0	0/1:130:63,64:63:2181:64:2220:-160.724,0,-157.897	1/1:123:0,123:0:0:123:4334:-389.813,-37.0267,0	1/1:116:0,116:0:0:116:4087:-367.25,-34.9195,0	1/1:120:0,120:0:0:120:4225:-379.842,-36.1236,0	0/1:99:44,55:44:1359:55:1912:-142.338,0,-92.6763	0/1:89:35,52:35:1136:52:1798:-135.241,0,-75.9568	1/1:89:0,88:0:0:88:3113:-279.304,-26.4906,0	1/1:112:1,109:1:36:109:3846:-342.52,-29.8589,0	0/1:91:40,51:40:1313:51:1806:-134.712,0,-91.0069	1/1:50:0,48:0:0:48:1719:-154.577,-14.4494,0	0/1:48:21,26:21:719:26:932:-69.7089,0,-50.6148	1/1:78:1,75:1:36:75:2632:-233.41,-19.5993,0	1/1:65:0,65:0:0:65:2324:-209.346,-19.567,0	0/1:172:90,81:90:3023:81:2824:-201.912,0,-220.399	0/1:159:67,89:67:2313:89:3184:-239.052,0,-161.208	0/1:44:17,27:17:593:27:959:-73.3022,0,-40.4514	0/1:177:87,86:87:2980:86:3059:-222.931,0,-216.011	1/1:69:2,64:2:72:64:2262:-196.49,-13.3586,0	1/1:78:0,77:0:0:77:2716:-244.159,-23.1793,0	0/1:10:5,5:5:179:5:180:-13.5194,0,-13.4501	0/1:15:8,7:8:281:7:252:-18.5088,0,-21.1149	1/1:5:0,5:0:0:5:180:-16.5326,-1.50515,0	0/1:7:1,6:1:36:6:216:-17.663,0,-1.49006	1/1:22:0,22:0:0:22:788:-71.0082,-6.62266,0	1/1:256:1,253:1:22:253:8880:-795.268,-74.4778,0	1/1:85:0,85:0:0:85:3034:-272.822,-25.5876,0	0/1:107:57,49:57:1859:49:1684:-119.338,0,-135.439	1/1:5:0,5:0:0:5:157:-14.4394,-1.50515,0	0/1:104:47,56:47:1561:56:1960:-145.085,0,-109.517	1/1:112:0,108:0:0:108:3819:-342.981,-32.5112,0	1/1:161:0,157:0:0:157:5593:-502.171,-47.2617,0	1/1:91:0,90:0:0:90:3148:-282.372,-27.0927,0	1/1:93:0,90:0:0:90:3124:-280.508,-27.0927,0	1/1:89:0,87:0:0:87:3062:-275.151,-26.1896,0	0/1:117:54,61:54:1820:61:2159:-159.247,0,-129.229	1/1:146:0,145:0:0:145:5096:-457.809,-43.6494,0	0/1:74:28,45:28:953:45:1615:-123.247,0,-63.8082	0/1:108:52,55:52:1762:55:1968:-144.868,0,-126.404	1/1:144:0,142:0:0:142:5017:-450.865,-42.7463,0	1/1:14:0,14:0:0:14:491:-44.4642,-4.21442,0	1/1:125:1,122:1:31:122:4316:-384.385,-34.2083,0	1/1:43:0,43:0:0:43:1527:-137.594,-12.9443,0	0/1:20:17,3:17:579:3:104:-3.66515,0,-46.3982	1/1:124:0,122:0:0:122:4340:-389.365,-36.7257,0	1/1:37:0,37:0:0:37:1313:-118.34,-11.1381,0	0/1:10:6,3:6:184:3:108:-7.11909,0,-13.9309	1/1:15:0,15:0:0:15:540:-48.7606,-4.51545,0	0/1:100:34,64:34:1159:64:2255:-172.662,0,-74.7721	1/1:116:5,109:5:169:109:3837:-329.331,-19.0955,0	0/1:4:3,1:3:91:1:36:-2.39415,0,-7.28715	0/1:108:46,62:46:1534:62:2199:-164.561,0,-105.76	0/1:170:82,86:82:2765:86:3054:-223.44,0,-198.037	0/1:73:41,32:41:1392:32:1152:-81.8697,0,-103.549	0/1:57:29,28:29:933:28:1008:-73.8236,0,-67.0164	1/1:136:1,135:1:36:135:4747:-423.264,-37.3418,0	1/1:110:1,109:1:36:109:3854:-343.129,-29.515,0	0/1:74:46,28:46:1538:28:967:-65.0481,0,-116.342	0/1:72:34,38:34:1161:38:1323:-97.3873,0,-83.1008	0/1:101:52,47:52:1717:47:1627:-116.569,0,-124.681	0/1:22:10,11:10:316:11:396:-29.4101,0,-22.2067	1/1:71:0,69:0:0:69:2423:-216.557,-20.7711,0	0/1:100:45,54:45:1533:54:1921:-142.767,0,-108.167	0/1:175:89,85:89:2964:85:3001:-217.439,0,-214.076	1/1:125:0,125:0:0:125:4433:-398.375,-37.6288,0	0/1:138:69,69:69:2297:69:2436:-177.453,0,-165.246	1/1:115:0,115:0:0:115:4075:-366.038,-34.6185,0	0/1:20:12,7:12:403:7:252:-17.0945,0,-30.6824	0/1:104:47,57:47:1601:57:2025:-150.056,0,-113.067	0/1:77:33,44:33:1113:44:1547:-116.121,0,-77.2758	0/1:181:96,82:96:3293:82:2910:-207.956,0,-242.38	0/1:104:61,40:61:2036:40:1415:-96.631,0,-152.56	0/1:111:49,60:49:1681:60:2136:-159.191,0,-118.513	1/1:88:0,84:0:0:84:2880:-259.029,-25.2865,0	1/1:151:0,147:0:0:147:5190:-466.855,-44.2514,0	1/1:30:0,30:0:0:30:1059:-95.2747,-9.0309,0	0/1:100:46,50:46:1460:50:1733:-126.791,0,-102.46	0/1:100:45,54:45:1553:54:1918:-142.346,0,-109.806	0/1:95:40,53:40:1350:53:1870:-139.268,0,-93.4566	0/1:134:69,63:69:2351:63:2212:-159.079,0,-171.635	0/1:95:62,33:62:2060:33:1159:-75.9943,0,-157.064	1/1:102:0,101:0:0:101:3532:-317.341,-30.404,0	1/1:202:0,197:0:0:197:6950:-624.926,-59.3029,0
chr11	31259083	.	CTACG	CTACA,TTACA	20382.7	PASS	AB=0.208727,0.251208;ABP=2266.07,1561.08;AC=37,28;AF=0.196809,0.148936;AN=188;AO=787,790;CIGAR=4M1X,1X3M1X;DP=6848;DPB=6848;DPRA=0.942234,1.05902;EPP=24.8657,1718.47;EPPR=11092.7;GTI=22;LEN=1,5;MEANALT=2.52326,2.77941;MQM=56.8767,56.1089;MQMR=59.9947;NS=94;NUMALT=2;ODDS=0.130723;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=28137,28114;QR=179429;RO=5111;RPL=438,0;RPP=24.8657,1718.47;RPPR=11092.7;RPR=349,790;RUN=1,1;SAF=787,790;SAP=1711.96,1718.47;SAR=0,0;SRF=5111;SRP=11101.4;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:47:35,10,0:35:1216:10,0:360,0:-18.9032,0,-95.9172,-29.4393,-98.9275,-128.299	0/0:66:64,1,0:64:2259:1,0:36,0:0,-16.3285,-199.976,-19.2659,-200.277,-203.214	0/0:136:125,8,2:125:4393:8,2:279,66:0,-14.9107,-370.111,-32.2989,-367.188,-389.276	0/2:156:125,5,22:125:4346:5,22:180,779:-25.8252,-48.7723,-400.611,0,-338.667,-346.725	0/1:56:43,7,6:43:1517:7,6:252,216:-7.60383,0,-121.412,-2.93283,-105.903,-124.646	0/0:29:27,1,1:27:939:1,1:36,36:0,-5.19021,-81.2236,-5.19391,-78.5901,-81.2269	0/0:75:73,2,0:73:2573:2,0:72,0:0,-15.7405,-224.984,-21.9752,-225.586,-231.461	0/1:80:71,8,1:71:2523:8,1:288,30:-2.13357,0,-203.241,-21.1147,-203.251,-226.405	0/0:58:53,5,0:53:1816:5,0:176,0:0,-1.28397,-147.541,-15.9546,-149.047,-163.366	0/2:77:65,4,7:65:2289:4,7:144,244:-0.15306,-7.9601,-193.127,0,-174.621,-184.264	0/2:29:11,6,10:11:392:6,10:212,360:-26.0723,-12.1247,-42.2756,0,-14.7052,-28.9544	0/2:39:32,1,6:32:1144:1,6:36,216:-7.95676,-14.6522,-107.629,0,-90.3399,-91.4712	0/1:31:26,5,0:26:914:5,0:171,0:-6.3852,0,-73.244,-14.212,-74.7491,-88.6179	0/1:24:15,5,4:15:527:5,4:180,141:-10.162,0,-41.3881,-3.21127,-31.4235,-44.8948	0/2:37:27,5,5:27:943:5,5:171,178:-6.3851,-0.646158,-75.8417,0,-62.8399,-75.2074	0/2:24:19,2,3:19:674:2,3:72,108:-3.08613,-2.93077,-57.237,0,-49.0325,-54.0048	0/1:10:8,1,1:8:276:1,1:36,36:-0.529363,0,-22.1079,-0.00370687,-19.4732,-22.1113	0/0:16:15,1,0:15:524:1,0:36,0:0,-1.22191,-43.8941,-4.51545,-44.1951,-47.1299	0/1:14:8,5,1:8:275:5,1:180,36:-12.1714,0,-20.8121,-11.6452,-19.3814,-33.667	0/1:124:109,12,3:109:3837:12,3:432,108:-2.36604,0,-308.747,-26.3671,-303.548,-337.825	0/0:68:60,6,1:60:2099:6,1:216,35:0,-0.432771,-169.395,-15.2163,-168.354,-185.674	0/0:114:103,10,0:103:3630:10,0:360,0:0,-1.70795,-294.259,-31.0061,-297.269,-326.553	0/0:110:101,1,5:101:3517:1,5:36,180:0,-27.5106,-313.205,-15.7044,-298.82,-300.207	0/0:81:70,3,0:70:2430:3,0:108,0:0,-12.2544,-208.896,-21.0721,-209.799,-218.612	0/0:86:78,4,2:78:2776:4,2:144,67:0,-11.7197,-236.787,-18.0596,-232.567,-243.711	0/0:298:283,9,5:283:9824:9,5:324,180:0,-58.8652,-854.751,-70.5022,-842.773,-867.59	0/0:193:172,7,11:172:6023:7,11:252,395:0,-31.3555,-519.306,-19.57,-489.211,-506.32	0/1:19:14,4,0:14:487:4,0:144,0:-7.5862,0,-38.4466,-11.8006,-39.6508,-51.3992	0/0:194:187,5,1:187:6568:5,1:180,36:0,-41.6002,-574.664,-53.3548,-573.231,-587.617	0/0:91:83,8,0:83:2947:8,0:288,0:0,-1.12632,-239.198,-24.9855,-241.606,-265.106	0/2:142:72,6,63:72:2504:6,63:216,2235:-160.229,-164.283,-366.064,0,-185.959,-184.615	1/2:48:3,25,18:3:108:25,18:900,647:-116.339,-43.958,-45.2453,-64.4851,0,-67.8793	1/2:91:10,27,37:10:352:27,37:972,1322:-154.413,-79.0181,-99.5474,-49.7553,0,-67.275	1/2:228:1,79,144:1:34:79,144:2809,5142:-643.572,-415.265,-394.241,-225.923,0,-185.332	1/2:78:4,20,49:4:138:20,49:711,1734:-186.553,-129.818,-135.008,-46.7599,0,-43.2214	1/2:125:8,63,54:8:276:63,54:2268,1909:-314.418,-132.436,-135.892,-161.979,0,-168.144	0/2:71:55,3,13:55:1940:3,13:99,467:-21.5634,-30.1229,-187.18,0,-149.986,-154.074	0/0:145:141,3,0:141:4924:3,0:104,0:0,-34.002,-433.609,-42.4452,-434.512,-442.965	0/2:22:11,5,6:11:396:5,6:180,214:-14.1158,-2.96133,-33.7701,0,-17.8501,-30.5088	1/1:15:0,9,1:0:0:9,1:324,30:-29.1056,-2.70927,0,-26.7098,-0.310092,-26.4088	0/0:74:70,2,1:70:2458:2,1:72,36:0,-15.1972,-214.637,-18.1363,-212.303,-217.877	0/1:23:14,7,1:14:500:7,1:252,36:-16.3631,0,-38.6726,-17.6411,-37.8436,-58.1062	0/1:76:65,8,2:65:2280:8,2:284,72:-3.55798,0,-183.134,-17.2704,-179.688,-202.211	0/2:25:20,0,4:20:708:0,4:0,139:-5.38986,-11.4105,-69.1085,0,-57.8089,-56.6048	0/2:28:22,2,3:22:766:2,3:72,107:-2.10126,-2.85097,-64.5351,0,-56.4146,-61.3827	0/0:80:80,0,0:80:2829:0,0:0,0:0,-24.0824,-254.85,-24.0824,-254.85,-254.85	0/1:78:62,10,5:62:2177:10,5:360,180:-10.3093,0,-174.165,-14.3016,-162.504,-189.975	0/0:118:102,9,1:102:3580:9,1:315,36:0,-5.13026,-293.785,-27.7669,-293.557,-318.823	0/0:62:62,0,0:62:2173:0,0:0,0:0,-18.6639,-195.837,-18.6639,-195.837,-195.837	0/1:69:60,9,0:60:2083:9,0:320,0:-8.36504,0,-166.968,-26.4268,-169.677,-195.75	0/0:140:136,0,4:136:4814:0,4:0,143:0,-40.9401,-433.066,-29.0561,-421.535,-420.331	1/2:73:11,33,22:11:395:33,22:1173,783:-123.574,-31.5813,-53.8719,-63.0815,0,-88.6827	0/0:97:92,5,0:92:3242:5,0:180,0:0,-12.9498,-275.753,-27.6948,-277.259,-291.65	0/1:48:33,8,7:33:1149:8,7:284,242:-13.209,0,-91.0257,-3.48341,-73.7705,-94.8026	1/2:94:7,31,54:7:251:31,54:1111,1917:-223.297,-135.127,-146.268,-69.8169,0,-74.0348	0/1:86: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chr11	31338272	.	A	G	91120.1	PASS	AB=0.507176;ABP=6.53215;AC=51;AF=0.271277;AN=188;AO=4025;CIGAR=1X;DP=13793;DPB=13793;DPRA=1.37135;EPP=20.6847;EPPR=11.8237;GTI=1;LEN=1;MEANALT=1.11667;MQM=59.9853;MQMR=59.9974;NS=94;NUMALT=1;ODDS=0.678411;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=142524;QR=348828;RO=9757;RPL=4014;RPP=8647.9;RPPR=20629.2;RPR=11;RUN=1;SAF=2092;SAP=16.6493;SAR=1933;SRF=4915;SRP=4.1963;SRR=4842;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:65:65,0:65:2323:0:0:0,-19.5669,-209.33	0/1:181:84,97:84:3016:97:3475:-258.474,0,-217.184	0/1:249:118,130:118:4236:130:4588:-338.21,0,-306.542	0/1:270:147,123:147:5257:123:4357:-311.027,0,-391.987	0/1:114:57,57:57:2040:57:2019:-147.665,0,-149.555	0/1:103:51,51:51:1820:51:1820:-133.163,0,-133.163	0/0:102:102,0:102:3630:0:0:0,-30.7051,-326.906	0/1:224:109,115:109:3896:115:4081:-300.045,0,-283.404	0/1:147:81,66:81:2889:66:2333:-165.975,0,-215.994	0/0:117:117,0:117:4185:0:0:0,-35.2205,-376.83	0/1:140:80,59:80:2864:59:2072:-144.692,0,-215.942	0/0:223:222,0:222:7916:0:0:0,-66.8287,-712.107	0/1:213:113,99:113:4036:99:3461:-247.66,0,-299.387	0/0:199:199,0:199:7145:0:0:0,-59.905,-643.102	0/0:180:180,0:180:6436:0:0:0,-54.1854,-579.325	0/0:153:153,0:153:5455:0:0:0,-46.0576,-491.078	0/1:153:78,75:78:2796:75:2658:-193.409,0,-205.822	0/1:142:76,66:76:2732:66:2312:-165.592,0,-203.376	0/0:105:105,0:105:3759:0:0:0,-31.6081,-338.509	0/0:181:181,0:181:6500:0:0:0,-54.4864,-585.082	0/1:240:117,123:117:4163:123:4391:-323.113,0,-302.605	0/0:67:67,0:67:2395:0:0:0,-20.169,-215.806	0/1:111:53,58:53:1900:58:2046:-150.997,0,-137.864	0/0:72:70,2:70:2512:2:63:0,-15.691,-220.349	0/0:93:93,0:93:3335:0:0:0,-27.9958,-300.366	0/1:248:126,122:126:4520:122:4352:-317.198,0,-332.311	0/1:354:164,190:164:5848:190:6715:-497.868,0,-419.868	0/1:80:25,55:25:896:55:1941:-150.882,0,-56.878	0/1:297:133,164:133:4747:164:5830:-435.408,0,-337.983	0/0:128:125,3:125:4467:3:104:0,-28.829,-392.497	0/0:131:128,3:128:4573:3:108:0,-29.3598,-401.659	0/1:12:7,5:7:248:5:176:-12.5727,0,-19.0518	0/1:38:13,25:13:459:25:867:-66.9057,0,-30.2049	0/0:23:23,0:23:824:0:0:0,-6.92369,-74.4833	0/1:46:18,28:18:631:28:986:-75.2046,0,-43.2683	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:425:423,1:423:15147:1:36:0,-124.398,-1359.35	0/0:90:90,0:90:3216:0:0:0,-27.0927,-289.663	0/1:132:66,66:66:2350:66:2345:-171.572,0,-172.022	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:190:86,104:86:3084:104:3720:-277.806,0,-220.592	0/0:87:87,0:87:3107:0:0:0,-26.1896,-279.857	0/0:182:182,0:182:6507:0:0:0,-54.7875,-585.715	0/0:157:157,0:157:5596:0:0:0,-47.2617,-503.763	0/0:157:157,0:157:5623:0:0:0,-47.2617,-506.19	0/0:83:83,0:83:2972:0:0:0,-24.9855,-267.713	0/1:154:60,94:60:2148:94:3322:-252.842,0,-147.229	0/0:154:154,0:154:5448:0:0:0,-46.3586,-490.451	0/1:92:52,40:52:1872:40:1427:-101.032,0,-141.064	0/0:199:199,0:199:7127:0:0:0,-59.905,-641.487	0/0:179:179,0:179:6385:0:0:0,-53.8844,-574.74	0/0:11:11,0:11:392:0:0:0,-3.31133,-35.6201	0/1:162:88,73:88:3141:73:2557:-181.553,0,-234.089	0/0:68:68,0:68:2436:0:0:0,-20.47,-219.491	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:156:155,0:155:5519:0:0:0,-46.6596,-496.608	0/0:58:58,0:58:2072:0:0:0,-17.4597,-186.751	0/1:17:7,10:7:248:10:352:-26.9007,0,-17.5467	0/0:23:23,0:23:820:0:0:0,-6.92369,-74.1225	0/1:140:57,83:57:2035:83:2921:-220.982,0,-141.277	0/1:224:129,95:129:4620:95:3366:-235.727,0,-348.533	0/1:18:6,12:6:212:12:416:-32.3516,0,-14.0063	0/1:136:73,63:73:2612:63:2243:-161.193,0,-194.388	0/1:255:105,150:105:3752:150:5303:-400.645,0,-261.118	0/1:110:53,57:53:1896:57:2028:-149.679,0,-137.805	0/1:143:72,71:72:2561:71:2512:-183.285,0,-187.692	0/0:156:154,2:154:5516:2:57:0,-41.5474,-491.152	0/0:193:192,1:192:6851:1:36:0,-54.5005,-613.061	0/1:114:61,53:61:2184:53:1867:-133.99,0,-162.509	0/1:127:59,68:59:2096:68:2408:-178.744,0,-150.679	0/1:199:101,98:101:3620:98:3508:-256.025,0,-266.1	0/1:39:16,23:16:576:23:806:-61.118,0,-40.4348	0/0:113:113,0:113:4034:0:0:0,-34.0164,-363.248	0/1:121:48,73:48:1709:73:2599:-197.732,0,-117.669	0/1:235:110,125:110:3939:125:4431:-328.221,0,-283.959	0/0:212:212,0:212:7608:0:0:0,-63.8184,-684.755	0/1:191:85,106:85:3032:106:3742:-279.485,0,-215.579	0/0:175:171,4:171:6093:4:144:0,-39.3666,-535.16	0/1:19:10,9:10:347:9:316:-23.0593,0,-25.844	0/1:164:84,80:84:2999:80:2849:-207.278,0,-220.773	0/1:181:90,91:90:3221:91:3202:-233.917,0,-235.624	0/0:229:229,0:229:8189:0:0:0,-68.9359,-737.022	0/1:215:123,92:123:4389:92:3270:-229.798,0,-330.461	0/1:200:101,99:101:3620:99:3523:-257.075,0,-265.799	0/0:181:181,0:181:6474:0:0:0,-54.4864,-582.745	0/0:346:336,10:336:12015:10:360:0,-71.4121,-1048.46	0/1:71:35,36:35:1241:36:1284:-94.4821,0,-90.6194	0/1:173:100,73:100:3584:73:2575:-179.833,0,-270.689	0/1:164:96,68:96:3418:68:2391:-166.077,0,-258.463	0/1:171:93,75:93:3320:75:2627:-185.745,0,-248.083	0/1:196:103,93:103:3699:93:3275:-235.971,0,-274.109	0/1:158:53,105:53:1895:105:3739:-289.149,0,-123.265	0/0:150:150,0:150:5380:0:0:0,-45.1545,-484.33	0/0:261:255,6:255:9136:6:212:0,-59.144,-802.788
chr11	31489433	.	G	C	105961	PASS	AB=0.481233;ABP=15.3175;AC=137;AF=0.728723;AN=188;AO=5032;CIGAR=1X;DP=7138;DPB=7138;DPRA=6.96676;EPP=10465.9;EPPR=4489.54;GTI=1;LEN=1;MEANALT=1.07527;MQM=59.41;MQMR=59.9828;NS=94;NUMALT=1;ODDS=0.523154;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=179756;QR=74799;RO=2098;RPL=4978;RPP=10465.9;RPPR=4489.54;RPR=54;RUN=1;SAF=0;SAP=10929.9;SAR=5032;SRF=0;SRP=4558.76;SRR=2098;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:49:0,49:0:0:49:1756:-158.323,-14.7505,0	0/1:57:28,29:28:988:29:1040:-76.7547,0,-72.0752	0/1:141:66,75:66:2349:75:2676:-197.866,0,-169.188	0/1:102:42,60:42:1487:60:2137:-161.603,0,-103.418	0/1:51:33,18:33:1180:18:648:-43.2994,0,-91.1555	0/1:69:30,39:30:1076:39:1400:-105.52,0,-76.3818	1/1:62:0,62:0:0:62:2208:-198.976,-18.6639,0	0/1:80:48,31:48:1705:31:1104:-75.3047,0,-129.593	0/1:49:30,19:30:1067:19:673:-46.1265,0,-81.5907	1/1:42:0,41:0:0:41:1468:-132.046,-12.3422,0	0/1:108:54,54:54:1936:54:1940:-141.58,0,-142.005	1/1:86:0,86:0:0:86:3073:-276.651,-25.8886,0	0/1:63:32,31:32:1148:31:1112:-81.4088,0,-84.6649	1/1:110:0,110:0:0:110:3947:-355.394,-33.1133,0	1/1:53:0,53:0:0:53:1904:-171.621,-15.9546,0	1/1:76:0,76:0:0:76:2712:-244.32,-22.8783,0	0/1:48:32,16:32:1129:16:559:-36.1849,0,-87.4669	0/1:43:26,17:26:936:17:608:-42.0901,0,-71.6152	1/1:35:1,34:1:36:34:1224:-105.888,-6.93778,0	1/1:133:0,133:0:0:133:4726:-425.466,-40.037,0	0/1:109:51,58:51:1828:58:2069:-153.636,0,-131.989	1/1:107:0,107:0:0:107:3825:-344.425,-32.2102,0	0/1:84:54,30:54:1923:30:1051:-69.6066,0,-148.06	0/1:20:2,16:2:68:16:572:-46.0225,0,-0.689315	1/1:58:0,58:0:0:58:2076:-187.108,-17.4597,0	0/1:164:78,85:78:2770:85:3052:-225.441,0,-200.114	0/1:198:109,89:109:3879:89:3192:-226.977,0,-289.702	0/1:28:18,10:18:644:10:360:-24.3155,0,-49.8618	0/1:201:84,117:84:3008:117:4184:-315.856,0,-210.444	1/1:101:1,100:1:36:100:3577:-318.388,-26.8058,0	1/1:75:0,75:0:0:75:2667:-239.865,-22.5773,0	0/1:19:6,13:6:212:13:457:-35.7145,0,-13.7052	0/1:29:20,9:20:708:9:324:-20.776,0,-55.3157	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:26:4,22:4:144:22:784:-63.0235,0,-5.48684	1/1:39:0,39:0:0:39:1396:-125.625,-11.7402,0	1/1:171:0,171:0:0:171:6106:-549.234,-51.4761,0	1/1:114:0,114:0:0:114:4080:-367.271,-34.3174,0	0/1:97:58,39:58:2063:39:1396:-96.533,0,-156.741	1/1:13:0,13:0:0:13:468:-42.4402,-3.91339,0	0/1:94:39,55:39:1389:55:1959:-148.275,0,-97.0101	1/1:45:0,45:0:0:45:1616:-145.725,-13.5464,0	1/1:86:0,86:0:0:86:3059:-275.186,-25.8886,0	1/1:47:0,47:0:0:47:1692:-152.565,-14.1484,0	1/1:51:0,51:0:0:51:1832:-165.154,-15.3525,0	1/1:63:1,62:1:36:62:2220:-196.465,-15.3666,0	0/1:83:36,47:36:1269:47:1684:-126.539,0,-89.5253	1/1:87:0,86:0:0:86:3027:-272.294,-25.8886,0	0/1:54:28,26:28:1004:26:928:-67.5826,0,-74.4121	1/1:80:0,80:0:0:80:2835:-255.315,-24.0824,0	1/1:74:0,74:0:0:74:2625:-236.489,-22.2762,0	1/1:14:0,14:0:0:14:492:-44.6,-4.21442,0	0/1:139:70,69:70:2476:69:2476:-181.24,0,-181.249	1/1:73:0,73:0:0:73:2605:-234.635,-21.9752,0	1/1:15:0,15:0:0:15:536:-48.5666,-4.51545,0	1/1:101:1,100:1:36:100:3556:-316.374,-26.8058,0	1/1:34:0,33:0:0:33:1166:-104.826,-9.93399,0	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	1/1:19:0,19:0:0:19:661:-59.8116,-5.71957,0	0/1:87:56,31:56:2008:31:1112:-74.1687,0,-154.804	0/1:128:72,56:72:2588:56:2008:-142.366,0,-194.637	0/1:13:4,9:4:144:9:320:-25.229,0,-9.40023	0/1:107:46,61:46:1627:61:2196:-165.422,0,-114.508	0/1:101:50,51:50:1783:51:1821:-133.748,0,-130.348	0/1:56:29,27:29:1036:27:972:-70.8482,0,-76.6962	0/1:59:20,39:20:707:39:1393:-107.879,0,-46.1938	1/1:81:0,81:0:0:81:2879:-259.32,-24.3834,0	1/1:148:0,148:0:0:148:5263:-473.396,-44.5524,0	0/1:88:50,38:50:1783:38:1368:-96.9256,0,-134.261	1/1:62:0,62:0:0:62:2210:-199.01,-18.6639,0	1/1:43:0,43:0:0:43:1543:-139.161,-12.9443,0	0/1:23:6,17:6:212:17:612:-48.485,0,-12.5011	1/1:102:0,102:0:0:102:3645:-328.036,-30.7051,0	0/1:57:23,34:23:824:34:1220:-92.7415,0,-57.3246	0/1:92:55,36:55:1956:36:1277:-87.4236,0,-148.562	1/1:116:0,116:0:0:116:4159:-374.466,-34.9195,0	0/1:171:98,73:98:3489:73:2603:-183.012,0,-262.745	1/1:63:0,63:0:0:63:2256:-202.483,-18.9649,0	0/1:24:8,16:8:288:16:576:-44.9503,0,-19.0427	0/1:59:26,33:26:936:33:1188:-89.4586,0,-66.7987	0/1:77:41,36:41:1464:36:1296:-93.7565,0,-108.877	1/1:67:0,67:0:0:67:2408:-216.95,-20.169,0	0/1:63:42,21:42:1512:21:750:-48.8571,0,-117.409	0/1:82:40,42:40:1424:42:1508:-111.328,0,-103.773	1/1:32:0,32:0:0:32:1144:-103.266,-9.63296,0	1/1:102:1,101:1:36:101:3612:-321.681,-27.1068,0	0/1:11:6,5:6:207:5:180:-13.2324,0,-15.6556	0/1:77:43,34:43:1527:34:1220:-86.8945,0,-114.543	0/1:91:52,39:52:1864:39:1400:-98.8891,0,-140.646	0/1:122:77,45:77:2764:45:1612:-107.866,0,-212.275	0/1:235:129,106:129:4590:106:3768:-268.512,0,-342.524	0/1:44:31,13:31:1104:13:464:-28.8498,0,-86.4253	1/1:102:0,102:0:0:102:3644:-328.144,-30.7051,0	1/1:69:0,69:0:0:69:2465:-222.009,-20.7711,0
chr11	31489435	.	GCCGGC	GCCTAT,GCCTGT	152828	PASS	AB=0.477251,0.515489;ABP=21.5845,11.6205;AC=137,51;AF=0.728723,0.271277;AN=188;AO=5100,2148;CIGAR=3M3X,3M1X1M1X;DP=7311;DPB=7310.67;DPRA=7.13587,1.22815;EPP=11077.5,4658.65;EPPR=0;GTI=1;LEN=3,6;MEANALT=2.1828,2.50877;MQM=59.4324,59.9856;MQMR=0;NS=94;NUMALT=2;ODDS=0.0671751;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=181593,75748;QR=0;RO=0;RPL=5100,2147;RPP=11077.5,4658.65;RPPR=0;RPR=0,1;RUN=1,1;SAF=0,0;SAP=11077.5,4667.33;SAR=5100,2148;SRF=0;SRP=0;SRR=0;TYPE=mnp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:50:0,50,0:0:0:50,0:1762,0:-158.861,-15.0515,0,-158.861,-15.0515,-158.861	1/2:59:0,30,29:0:0:30,29:1062,1008:-168.805,-82.2983,-73.2674,-86.8575,0,-78.1276	1/2:149:0,79,68:0:0:79,68:2802,2362:-419.143,-192.073,-168.291,-227.139,0,-206.669	1/2:104:0,60,44:0:0:60,44:2137,1562:-300.504,-127.624,-109.562,-173.235,0,-159.989	1/2:52:0,18,28:0:0:18,28:646,1002:-134.402,-81.7076,-76.2891,-52.6933,0,-44.2644	1/2:69:0,39,30:0:0:39,30:1397,1064:-200.97,-87.04,-75.2998,-114.286,0,-105.255	1/1:63:0,63,0:0:0:63,0:2213,0:-199.422,-18.9649,0,-199.422,-18.9649,-199.422	1/2:82:0,32,48:0:0:32,48:1131,1699:-230.561,-138.466,-128.834,-92.1674,0,-77.7179	1/2:53:0,21,32:0:0:21,32:752,1130:-153.514,-92.3752,-86.0536,-61.4942,0,-51.8613	1/1:41:0,41,0:0:0:41,0:1471,0:-132.685,-12.3422,0,-132.685,-12.3422,-132.685	1/2:112:0,56,56:0:0:56,56:2014,1986:-325.692,-162.157,-145.299,-163.891,0,-147.033	1/1:87:0,87,0:0:0:87,0:3116,0:-280.536,-26.1896,0,-280.536,-26.1896,-280.536	1/2:66:0,33,33:0:0:33,33:1178,1175:-192.143,-96.1232,-86.1892,-96.3758,0,-86.4419	1/1:115:0,114,0:0:0:114,0:4081,0:-366.993,-34.3174,0,-366.993,-34.3174,-366.993	1/1:53:0,53,0:0:0:53,0:1892,0:-170.541,-15.9546,0,-170.541,-15.9546,-170.541	1/1:77:0,77,0:0:0:77,0:2753,0:-248.006,-23.1793,0,-248.006,-23.1793,-248.006	1/2:50:0,17,33:0:0:17,33:592,1156:-142.541,-94.4114,-89.2939,-48.4785,0,-38.5446	1/2:44:0,17,27:0:0:17,27:602,965:-128.059,-79.0394,-73.9219,-49.3743,0,-41.2465	1/1:36:0,35,1:0:0:35,1:1251,36:-111.558,-10.5361,0,-108.62,-7.23881,-108.319	1/1:136:0,133,0:0:0:133,0:4717,0:-424.365,-40.037,0,-424.365,-40.037,-424.365	1/2:111:0,59,52:0:0:59,52:2096,1845:-321.438,-150.677,-132.916,-171.116,0,-155.463	1/1:108:0,108,0:0:0:108,0:3853,0:-346.936,-32.5112,0,-346.936,-32.5112,-346.936	1/2:86:0,30,56:0:0:30,56:1044,1985:-246.867,-162.067,-153.036,-85.1492,0,-68.2916	1/2:20:0,17,2:0:0:17,2:593,67:-53.6902,-5.44272,-0.325206,-48.2654,0,-47.6634	1/1:58:0,58,0:0:0:58,0:2060,0:-185.668,-17.4597,0,-185.668,-17.4597,-185.668	1/2:166:0,86,79:0:0:86,79:3065,2797:-477.579,-227.83,-201.941,-249.744,0,-225.963	1/2:203:0,87,112:0:0:87,112:3095,3931:-571.538,-319.939,-293.75,-251.619,0,-217.904	1/2:29:0,11,17:0:0:11,17:394,607:-81.6169,-49.4844,-46.1731,-32.1305,0,-27.013	1/2:206:0,118,87:0:0:118,87:4211,3041:-589.475,-247.459,-211.938,-342.096,0,-315.907	1/1:103:0,102,1:0:0:102,1:3656,36:-328.73,-30.7051,0,-325.793,-27.4078,-325.492	1/1:77:0,75,0:0:0:75,0:2677,0:-240.88,-22.5773,0,-240.88,-22.5773,-240.88	1/2:19:0,13,6:0:0:13,6:457,216:-55.1261,-17.9843,-14.0709,-37.4988,0,-35.6927	1/2:31:0,10,21:0:0:10,21:357,743:-89.9787,-60.8728,-57.8625,-29.4618,0,-23.1402	1/1:4:0,4,0:0:0:4,0:144,0:-13.3136,-1.20412,0,-13.3136,-1.20412,-13.3136	1/2:27:0,22,5:0:0:22,5:792,175:-79.1857,-14.588,-7.96534,-64.9494,0,-63.4442	1/1:39:0,39,0:0:0:39,0:1399,0:-125.931,-11.7402,0,-125.931,-11.7402,-125.931	1/1:175:0,173,0:0:0:173,0:6152,0:-552.767,-52.0782,0,-552.767,-52.0782,-552.767	1/1:118:0,115,1:0:0:115,1:4079,36:-366.973,-34.6185,0,-364.035,-31.656,-363.734	1/2:99:0,39,59:0:0:39,59:1393,2087:-283.341,-169.977,-158.236,-113.36,0,-95.5996	1/1:14:0,12,0:0:0:12,0:410,0:-36.8634,-3.61236,0,-36.8634,-3.61236,-36.8634	1/2:94:0,54,39:0:0:54,39:1932,1394:-271.213,-113.679,-97.4238,-157.551,0,-145.811	1/1:45:0,45,0:0:0:45,0:1609,0:-145.095,-13.5464,0,-145.095,-13.5464,-145.095	1/1:89:0,88,0:0:0:88,0:3105,0:-278.41,-26.4906,0,-278.41,-26.4906,-278.41	1/1:49:0,49,0:0:0:49,0:1751,0:-157.871,-14.7505,0,-157.871,-14.7505,-157.871	1/1:53:0,53,0:0:0:53,0:1889,0:-170.197,-15.9546,0,-170.197,-15.9546,-170.197	1/1:66:0,64,1:0:0:64,1:2287,36:-205.73,-19.2659,0,-202.792,-16.3285,-202.491	1/2:85:0,48,36:0:0:48,36:1679,1239:-237.227,-100.758,-86.3086,-136.601,0,-125.764	1/1:89:0,88,0:0:0:88,0:3144,0:-282.95,-26.4906,0,-282.95,-26.4906,-282.95	1/2:55:0,27,28:0:0:27,28:962,966:-157.236,-78.8185,-70.6907,-78.7683,0,-70.3394	1/1:81:0,79,0:0:0:79,0:2832,0:-254.805,-23.7814,0,-254.805,-23.7814,-254.805	1/1:77:0,76,0:0:0:76,0:2708,0:-243.606,-22.8783,0,-243.606,-22.8783,-243.606	1/1:14:0,13,0:0:0:13,0:463,0:-41.7149,-3.91339,0,-41.7149,-3.91339,-41.7149	1/2:141:0,71,70:0:0:71,70:2537,2470:-408.315,-201.481,-180.108,-207.189,0,-186.117	1/1:74:0,74,0:0:0:74,0:2636,0:-237.306,-22.2762,0,-237.306,-22.2762,-237.306	1/1:16:0,16,0:0:0:16,0:562,0:-50.9075,-4.81648,0,-50.9075,-4.81648,-50.9075	1/1:104:0,103,1:0:0:103,1:3646,36:-327.476,-31.0061,0,-324.538,-27.7088,-324.237	1/1:35:0,34,0:0:0:34,0:1217,0:-10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chr11	31496860	.	CTTC	CTTT,TTTT	548530	PASS	AB=0.484019,0.510935;ABP=26.7471,14.1226;AC=139,49;AF=0.739362,0.260638;AN=188;AO=14652,5510;CIGAR=3M1X,1X2M1X;DP=20255;DPB=20257.2;DPRA=0,1.14584;EPP=31819.4,11967.8;EPPR=24.725;GTI=0;LEN=1,4;MEANALT=2.41489,2.90164;MQM=59.8675,56.1535;MQMR=60;NS=94;NUMALT=2;ODDS=2.09966;PAIRED=0,0;PAIREDR=0;PAO=0,9;PQA=0,208;PQR=0;PRO=0;QA=523070,192716;QR=345;RO=10;RPL=7415,2969;RPP=7.70597,75.2025;RPPR=6.48466;RPR=7237,2541;RUN=1,1;SAF=7415,2969;SAP=7.70597,75.2025;SAR=7237,2541;SRF=3;SRP=6.48466;SRR=7;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:89:0,88,0:0:0:88,0:3092,0:-278.213,-26.4906,0,-278.213,-26.4906,-278.213	1/2:471:0,215,254:0:0:215,254:7691,8815:-1341.6,-714.455,-649.733,-627.201,0,-550.739	1/2:181:0,77,104:0:0:77,104:2751,3664:-522.027,-297.744,-274.565,-224.452,0,-193.145	1/2:506:0,249,255:0:0:249,255:8894,8853:-1443.85,-718.76,-643.804,-725.164,0,-648.402	1/2:180:0,79,101:0:0:79,101:2806,3545:-517.178,-288.537,-264.756,-228.994,0,-198.59	1/2:139:0,68,71:0:0:68,71:2420,2496:-400.382,-203.257,-182.787,-197.479,0,-176.106	1/1:257:0,255,1:0:0:255,1:9110,36:-819.371,-76.7627,0,-816.434,-73.7703,-816.133	1/2:513:0,242,266:0:0:242,266:8655,9349:-1463.92,-758.867,-686.018,-705.099,0,-625.025	1/2:235:0,134,100:0:0:134,100:4781,3516:-675.218,-285.48,-245.142,-389.791,0,-359.688	1/1:262:0,262,0:0:0:262,0:9364,0:-842.7,-78.8699,0,-842.7,-78.8699,-842.7	1/2:138:0,74,62:0:0:74,62:2635,2147:-388.925,-174.157,-151.88,-214.798,0,-196.134	1/1:224:0,224,0:0:0:224,0:7985,0:-718.646,-67.4307,0,-718.646,-67.4307,-718.646	1/2:193:0,94,99:0:0:94,99:3354,3488:-557.328,-283.927,-255.63,-273.755,0,-243.953	1/1:155:0,155,0:0:0:155,0:5547,0:-499.3,-46.6597,0,-499.3,-46.6597,-499.3	1/1:180:0,180,0:0:0:180,0:6443,0:-579.954,-54.1854,0,-579.954,-54.1854,-579.954	1/1:173:0,171,1:0:0:171,1:6113,36:-549.896,-51.4761,0,-546.96,-48.5397,-546.659	1/2:154:0,71,81:0:0:71,81:2521,2791:-431.685,-226.289,-204.916,-205.473,0,-181.089	1/2:161:1,81,79:1:30:81,79:2881,2789:-458.931,-224.45,-202.464,-232.523,0,-211.14	1/1:104:0,103,0:0:0:103,0:3682,0:-331.352,-31.0061,0,-331.352,-31.0061,-331.352	1/1:452:0,450,0:0:0:450,0:16073,0:-1445.93,-135.464,0,-1445.93,-135.464,-1445.93	1/2:395:0,186,207:0:0:186,207:6658,7246:-1131.58,-588.64,-532.648,-543.039,0,-480.725	1/1:183:0,180,2:0:0:180,2:6420,71:-577.543,-54.1854,0,-571.764,-48.3829,-571.162	1/2:190:0,86,104:0:0:86,104:3061,3610:-543.127,-293.648,-267.76,-249.83,0,-218.523	1/1:258:0,234,22:0:0:234,22:8367,773:-752.661,-70.441,0,-689.766,-7.48041,-683.144	1/1:112:0,112,0:0:0:112,0:3997,0:-359.892,-33.7154,0,-359.892,-33.7154,-359.892	1/2:780:0,368,409:0:0:368,409:13184,14306:-2237.72,-1162.68,-1051.9,-1075.11,0,-951.986	1/2:434:0,213,220:0:0:213,220:7604,7729:-1248.23,-628.334,-564.214,-619.965,0,-553.738	1/2:69:0,24,44:0:0:24,44:864,1534:-195.066,-124.569,-117.344,-70.4939,0,-57.2486	1/2:651:0,290,360:0:0:290,360:10370,12645:-1873.84,-1028.28,-940.979,-845.552,0,-737.181	1/1:200:0,194,6:0:0:194,6:6893,215:-619.953,-58.3998,0,-602.55,-40.6409,-600.744	1/1:288:0,288,0:0:0:288,0:10246,0:-922.038,-86.6966,0,-922.038,-86.6966,-922.038	1/2:29:0,26,3:0:0:26,3:921,106:-84.0012,-8.97589,-1.14911,-75.3783,0,-74.4752	1/2:39:0,14,25:0:0:14,25:504,855:-110.8,-69.679,-65.4645,-41.4744,0,-33.9487	1/1:7:0,6,0:0:0:6,0:212,0:-19.1344,-1.80618,0,-19.1344,-1.80618,-19.1344	1/2:23:0,13,10:0:0:13,10:464,341:-65.5166,-27.6782,-23.7648,-38.1841,0,-35.1738	1/1:10:0,10,0:0:0:10,0:356,0:-32.3812,-3.0103,0,-32.3812,-3.0103,-32.3812	1/1:529:0,528,1:0:0:528,1:18898,36:-1700.01,-158.944,0,-1697.08,-155.649,-1696.78	1/1:348:0,344,1:0:0:344,1:12208,36:-1098.13,-103.554,0,-1095.2,-100.618,-1094.9	1/2:170:0,95,75:0:0:95,75:3408,2637:-492.324,-214.635,-186.037,-278.043,0,-255.466	1/1:7:0,7,0:0:0:7,0:248,0:-22.6642,-2.10721,0,-22.6642,-2.10721,-22.6642	1/2:277:0,138,138:0:0:138,138:4933,4849:-796.054,-394.126,-352.584,-401.922,0,-360.38	1/1:109:0,109,0:0:0:109,0:3920,0:-352.991,-32.8123,0,-352.991,-32.8123,-352.991	1/1:315:0,314,0:0:0:314,0:11224,0:-1009.73,-94.5234,0,-1009.73,-94.5234,-1009.73	1/1:247:0,244,0:0:0:244,0:8739,0:-786.199,-73.4513,0,-786.199,-73.4513,-786.199	1/1:182:0,181,0:0:0:181,0:6413,0:-576.959,-54.4864,0,-576.959,-54.4864,-576.959	1/1:194:1,192,0:1:36:192,0:6868,0:-614.625,-54.8204,0,-614.926,-57.7978,-617.863	1/2:226:0,97,129:0:0:97,129:3471,4502:-648.585,-365.54,-336.34,-283.398,0,-244.565	1/1:407:0,407,0:0:0:407,0:14548,0:-1309.03,-122.519,0,-1309.03,-122.519,-1309.03	1/2:250:0,100,149:0:0:100,149:3573,5268:-719.788,-428.483,-398.38,-291.37,0,-246.517	1/1:256:0,256,0:0:0:256,0:9156,0:-824.009,-77.0637,0,-824.009,-77.0637,-824.009	1/1:331:0,331,0:0:0:331,0:11836,0:-1065.06,-99.6409,0,-1065.06,-99.6409,-1065.06	1/1:6:0,6,0:0:0:6,0:216,0:-19.7905,-1.80618,0,-19.7905,-1.80618,-19.7905	1/2:198:0,102,94:0:0:102,94:3641,3247:-559.682,-262.851,-232.146,-296.875,0,-268.578	1/1:87:0,85,1:0:0:85,1:3051,36:-274.465,-25.5876,0,-271.533,-22.6466,-271.232	1/1:19:0,19,0:0:0:19,0:665,0:-60.1736,-5.71957,0,-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chr11	31659199	.	A	C	49101.7	PASS	AB=0.505768;ABP=4.61346;AC=48;AF=0.255319;AN=188;AO=2819;CIGAR=1X;DP=10805;DPB=10805;DPRA=1.11972;EPP=5781.89;EPPR=16596.8;GTI=0;LEN=1;MEANALT=1.03704;MQM=59.9947;MQMR=59.9917;NS=94;NUMALT=1;ODDS=1.8701;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=100401;QR=285176;RO=7982;RPL=40;RPP=5781.89;RPPR=16605.3;RPR=2779;RUN=1;SAF=2819;SAP=6124.39;SAR=0;SRF=7981;SRP=17327;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:25:25,0:25:877:0:0:0,-7.52575,-79.2452	0/1:219:105,114:105:3740:114:4056:-299.304,0,-270.859	0/1:208:124,84:124:4421:84:2994:-207.077,0,-335.448	0/1:222:99,123:99:3521:123:4383:-327.816,0,-250.271	0/1:87:25,62:25:900:62:2216:-173.515,0,-55.1314	0/1:34:11,23:11:381:23:809:-62.8933,0,-24.3856	0/0:108:108,0:108:3876:0:0:0,-32.5112,-349.034	0/1:189:110,79:110:3933:79:2791:-194.535,0,-297.266	0/1:108:55,53:55:1976:53:1892:-138.047,0,-145.603	0/0:136:136,0:136:4880:0:0:0,-40.9401,-439.351	0/1:83:46,37:46:1648:37:1325:-94.5667,0,-123.623	0/0:64:64,0:64:2285:0:0:0,-19.2659,-205.91	0/1:75:37,38:37:1332:38:1368:-100.844,0,-97.6051	0/0:117:117,0:117:4192:0:0:0,-35.2205,-377.461	0/0:59:59,0:59:2108:0:0:0,-17.7608,-189.989	0/0:87:87,0:87:3120:0:0:0,-26.1896,-281.026	0/1:58:32,26:32:1148:26:936:-67.0997,0,-86.1701	0/1:53:37,16:37:1323:16:576:-36.2204,0,-103.417	0/0:53:53,0:53:1889:0:0:0,-15.9546,-170.286	0/0:196:194,1:194:6899:1:36:0,-55.3875,-617.454	0/1:164:81,83:81:2912:83:2954:-216.724,0,-212.946	0/0:254:253,1:253:9027:1:36:0,-72.8633,-808.808	0/1:48:22,26:22:784:26:913:-68.0331,0,-56.4335	0/1:82:71,11:71:2544:11:392:-10.9356,0,-204.526	0/0:117:117,0:117:4180:0:0:0,-35.2205,-376.383	0/1:404:200,204:200:7118:204:7302:-535.613,0,-519.064	0/1:265:109,156:109:3896:156:5526:-417.696,0,-271.062	0/1:37:19,18:19:680:18:648:-47.5138,0,-50.3911	0/1:368:178,190:178:6340:190:6744:-496.26,0,-459.908	0/0:175:167,8:167:5981:8:288:0,-26.4128,-512.127	0/0:155:155,0:155:5540:0:0:0,-46.6596,-498.726	0/1:38:22,16:22:792:16:568:-40.0127,0,-60.1665	0/1:54:35,19:35:1248:19:676:-44.9124,0,-96.3692	0/0:8:8,0:8:280:0:0:0,-2.40824,-25.5393	0/1:24:10,14:10:356:14:500:-38.1115,0,-25.1565	0/0:59:59,0:59:2116:0:0:0,-17.7608,-190.709	0/0:176:176,0:176:6297:0:0:0,-52.9813,-566.821	0/0:247:247,0:247:8784:0:0:0,-74.3544,-790.549	0/1:76:43,33:43:1540:33:1188:-84.3503,0,-116.015	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:138:61,77:61:2184:77:2727:-204.129,0,-155.284	0/0:52:52,0:52:1826:0:0:0,-15.6536,-164.617	0/0:170:170,0:170:6104:0:0:0,-51.1751,-549.459	0/0:51:51,0:51:1798:0:0:0,-15.3525,-162.098	0/0:48:48,0:48:1720:0:0:0,-14.4494,-155.086	0/0:115:115,0:115:4117:0:0:0,-34.6184,-370.713	0/1:142:63,79:63:2268:79:2840:-213.091,0,-161.636	0/0:243:243,0:243:8719:0:0:0,-73.1503,-784.697	0/1:151:68,83:68:2436:83:2976:-222.617,0,-174.04	0/0:136:135,0:135:4837:0:0:0,-40.639,-435.122	0/0:178:178,0:178:6362:0:0:0,-53.5833,-572.668	0/0:41:41,0:41:1468:0:0:0,-12.3422,-132.416	0/1:176:83,93:83:2968:93:3299:-244.147,0,-214.372	0/0:59:59,0:59:2093:0:0:0,-17.7608,-188.638	0/0:52:52,0:52:1864:0:0:0,-15.6536,-168.039	0/0:116:115,1:115:4120:1:36:0,-31.3212,-367.386	0/0:46:46,0:46:1652:0:0:0,-13.8474,-148.968	0/1:31:16,15:16:572:15:540:-39.6046,0,-42.4815	0/0:30:30,0:30:1076:0:0:0,-9.0309,-97.1529	0/1:78:38,40:38:1360:40:1418:-104.435,0,-99.2203	0/1:114:57,57:57:2043:57:2012:-147.034,0,-149.824	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:229:229,0:229:8185:0:0:0,-68.9359,-736.608	0/1:212:98,114:98:3509:114:4043:-300.243,0,-252.2	0/1:58:25,33:25:884:33:1180:-89.0483,0,-62.4186	0/1:121:73,48:73:2612:48:1709:-117.67,0,-198.903	0/0:234:233,0:233:8329:0:0:0,-70.14,-749.258	0/0:90:90,0:90:3232:0:0:0,-27.0927,-291.101	0/1:28:15,13:15:540:13:468:-34.0308,0,-40.5077	0/0:114:114,0:114:4073:0:0:0,-34.3174,-366.755	0/0:102:101,1:101:3608:1:36:0,-27.1068,-321.329	0/1:60:27,33:27:964:33:1184:-88.8065,0,-69.015	0/0:152:152,0:152:5444:0:0:0,-45.7566,-490.089	0/1:65:33,32:33:1188:32:1143:-83.6117,0,-87.6535	0/1:181:69,112:69:2453:112:3949:-301.117,0,-166.532	0/0:218:218,0:218:7815:0:0:0,-65.6245,-703.377	0/1:185:101,84:101:3605:84:2992:-213.823,0,-268.965	0/0:112:111,1:111:3934:1:36:0,-30.1171,-350.654	0/1:34:14,20:14:500:20:720:-54.8938,0,-35.1012	0/1:152:69,83:69:2476:83:2950:-219.977,0,-177.337	0/1:134:66,68:66:2353:68:2431:-178.707,0,-171.689	0/0:229:229,0:229:8160:0:0:0,-68.9359,-734.326	0/1:86:45,41:45:1604:41:1468:-106.528,0,-118.762	0/1:51:33,18:33:1165:18:636:-42.2149,0,-89.8025	0/0:67:67,0:67:2381:0:0:0,-20.169,-214.546	0/0:109:109,0:109:3881:0:0:0,-32.8123,-349.485	0/1:30:18,12:18:644:12:428:-29.8279,0,-49.2597	0/1:68:32,36:32:1152:36:1287:-95.6628,0,-83.5201	0/1:69:29,40:29:1044:40:1412:-106.603,0,-73.5037	0/1:78:37,41:37:1324:41:1476:-109.656,0,-95.9818	0/1:154:84,69:84:2989:69:2460:-175.237,0,-222.824	0/1:56:16,40:16:527:40:1428:-111.96,0,-30.8822	0/0:132:132,0:132:4713:0:0:0,-39.736,-424.329	0/0:66:66,0:66:2357:0:0:0,-19.868,-212.387
chr11	31741322	.	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chr11	31857907	.	C	T	34165.8	PASS	AB=0.492852;ABP=4.84187;AC=47;AF=0.25;AN=188;AO=2040;CIGAR=1X;DP=8086;DPB=8086;DPRA=1.10707;EPP=4432.81;EPPR=13127.4;GTI=1;LEN=1;MEANALT=1.02;MQM=59.9525;MQMR=60;NS=94;NUMALT=1;ODDS=3.01395;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73015;QR=215898;RO=6044;RPL=0;RPP=4432.81;RPPR=13127.4;RPR=2040;RUN=1;SAF=2040;SAP=4432.81;SAR=0;SRF=6044;SRP=13127.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:84:84,0:84:2987:0:0:0,-25.2865,-269.063	0/1:56:27,29:27:964:29:1040:-77.0561,0,-70.2191	0/1:182:108,74:108:3851:74:2638:-182.862,0,-291.999	0/1:146:71,75:71:2536:75:2688:-198.214,0,-184.541	0/1:41:21,20:21:752:20:720:-52.7865,0,-55.664	0/1:34:14,20:14:496:20:712:-54.1716,0,-34.7392	0/0:153:153,0:153:5469:0:0:0,-46.0576,-492.337	0/1:105:64,41:64:2276:41:1472:-101.168,0,-173.494	0/1:152:80,72:80:2852:72:2560:-184.887,0,-211.162	0/0:51:51,0:51:1824:0:0:0,-15.3525,-164.441	0/1:119:50,69:50:1788:69:2466:-186.371,0,-125.38	0/0:156:156,0:156:5566:0:0:0,-46.9607,-501.065	0/1:105:52,53:52:1860:53:1885:-138.318,0,-136.071	0/0:86:86,0:86:3075:0:0:0,-25.8886,-276.978	0/0:84:84,0:84:3003:0:0:0,-25.2865,-270.501	0/0:98:98,0:98:3507:0:0:0,-29.5009,-315.84	0/1:42:23,19:23:824:19:680:-48.8859,0,-61.8401	0/1:57:24,33:24:855:33:1188:-90.0699,0,-60.1115	0/0:49:49,0:49:1760:0:0:0,-14.7505,-158.684	0/0:96:95,0:95:3385:0:0:0,-28.5978,-304.505	0/1:118:72,46:72:2572:46:1648:-113.087,0,-196.208	0/0:56:56,0:56:1988:0:0:0,-16.8577,-179.194	0/1:101:48,53:48:1720:53:1896:-140.513,0,-124.681	0/0:56:54,2:54:1928:2:72:0,-10.021,-166.96	0/0:105:105,0:105:3752:0:0:0,-31.6081,-337.881	0/1:163:69,94:69:2456:94:3368:-254.268,0,-172.227	0/1:211:102,109:102:3656:109:3904:-288.036,0,-265.726	0/1:30:13,17:13:468:17:612:-46.3825,0,-33.4287	0/1:181:85,96:85:3027:96:3438:-255.147,0,-218.175	0/0:80:80,0:80:2852:0:0:0,-24.0824,-256.919	0/0:106:106,0:106:3765:0:0:0,-31.9092,-339.05	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	0/1:25:11,14:11:388:14:504:-38.1723,0,-27.7316	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:11:9,2:9:324:2:72:-3.52539,0,-26.1945	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:207:207,0:207:7412:0:0:0,-62.3132,-667.126	0/0:61:61,0:61:2180:0:0:0,-18.3628,-196.466	0/1:67:38,28:38:1349:28:1008:-70.8085,0,-101.481	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/1:106:57,49:57:2027:49:1760:-126.757,0,-150.793	0/0:39:39,0:39:1391:0:0:0,-11.7402,-125.488	0/0:157:157,0:157:5620:0:0:0,-47.2617,-505.922	0/0:77:77,0:77:2751:0:0:0,-23.1793,-247.832	0/0:54:54,0:54:1923:0:0:0,-16.2556,-173.346	0/0:80:80,0:80:2864:0:0:0,-24.0824,-257.997	0/1:114:53,61:53:1900:61:2188:-162.868,0,-136.96	0/0:94:94,0:94:3360:0:0:0,-28.2968,-302.617	0/1:86:35,51:35:1244:51:1832:-139.272,0,-86.3761	0/0:66:66,0:66:2352:0:0:0,-19.868,-211.939	0/0:84:84,0:84:2992:0:0:0,-25.2865,-269.513	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:145:87,58:87:3116:58:2076:-143.461,0,-237.017	0/0:48:48,0:48:1724:0:0:0,-14.4494,-155.445	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:92:92,0:92:3308:0:0:0,-27.6948,-297.937	0/0:29:29,0:29:1044:0:0:0,-8.72987,-94.2748	0/1:15:11,4:11:396:4:140:-8.42913,0,-31.4673	0/0:20:20,0:20:716:0:0:0,-6.0206,-64.7677	0/1:88:34,54:34:1216:54:1932:-147.666,0,-83.2559	0/1:103:54,49:54:1936:49:1755:-127.227,0,-143.51	0/1:11:10,1:10:360:1:36:-0.286945,0,-29.433	0/0:78:78,0:78:2784:0:0:0,-23.4803,-250.801	0/1:114:72,42:72:2564:42:1508:-101.697,0,-196.693	0/1:70:47,23:47:1688:23:824:-53.4112,0,-131.135	0/1:53:20,33:20:716:33:1176:-90.1932,0,-48.8131	0/0:155:155,0:155:5528:0:0:0,-46.6596,-497.648	0/0:167:166,1:166:5928:1:36:0,-46.6737,-530.032	0/1:80:40,40:40:1427:40:1440:-105.815,0,-104.644	0/0:87:87,0:87:3104:0:0:0,-26.1896,-279.588	0/0:64:64,0:64:2296:0:0:0,-19.2659,-206.901	0/1:22:13,9:13:464:9:324:-22.8832,0,-35.4748	0/0:68:68,0:68:2440:0:0:0,-20.47,-219.855	0/1:76:33,43:33:1180:43:1533:-115.384,0,-83.6298	0/1:182:91,91:91:3224:91:3258:-238.512,0,-235.598	0/0:118:118,0:118:4224:0:0:0,-35.5215,-380.34	0/1:90:50,40:50:1784:40:1432:-102.085,0,-133.75	0/0:54:54,0:54:1928:0:0:0,-16.2556,-173.797	0/1:25:9,16:9:312:16:576:-44.6492,0,-20.8896	0/1:91:39,52:39:1392:52:1856:-139.926,0,-98.1853	0/1:80:38,42:38:1360:42:1512:-112.292,0,-98.6182	0/0:215:215,0:215:7692:0:0:0,-64.7214,-692.315	0/1:70:34,36:34:1220:36:1288:-95.1515,0,-89.0347	0/1:89:51,38:51:1832:38:1351:-95.0979,0,-138.369	0/0:53:53,0:53:1896:0:0:0,-15.9546,-170.918	0/0:155:152,3:152:5417:3:108:0,-36.5845,-477.586	0/1:29:13,16:13:456:16:562:-42.1779,0,-32.6434	0/0:88:88,0:88:3134:0:0:0,-26.4906,-282.286	0/1:85:44,41:44:1558:41:1468:-106.806,0,-114.923	0/1:93:43,50:43:1540:50:1781:-132.576,0,-110.897	0/1:180:106,74:106:3787:74:2648:-184.381,0,-286.843	0/1:68:20,48:20:716:48:1720:-134.615,0,-44.2977	0/0:96:96,0:96:3432:0:0:0,-28.8989,-309.094	0/0:129:129,0:129:4620:0:0:0,-38.8329,-415.963
chr11	31890350	.	T	C	4353.57	PASS	AB=0.225518;ABP=1392.95;AC=45;AF=0.239362;AN=188;AO=498;CIGAR=1X;DP=4012;DPB=4012;DPRA=1.42384;EPP=1084.4;EPPR=7631.39;GTI=15;LEN=1;MEANALT=1.02083;MQM=59.9317;MQMR=59.9872;NS=94;NUMALT=1;ODDS=1.1979;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17814;QR=125386;RO=3513;RPL=498;RPP=1084.4;RPPR=7631.39;RPR=0;RUN=1;SAF=0;SAP=1084.4;SAR=498;SRF=0;SRP=7631.39;SRR=3513;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/1:144:111,33:111:3954:33:1176:-62.7994,0,-312.701	0/1:30:25,5:25:896:5:176:-7.15412,0,-71.9295	0/1:76:58,18:58:2065:18:648:-35.7736,0,-163.241	0/1:37:30,7:30:1068:7:252:-11.8908,0,-85.294	0/1:24:17,7:17:604:7:252:-15.8042,0,-47.4659	0/0:43:43,0:43:1525:0:0:0,-12.9443,-137.541	0/1:82:71,11:71:2512:11:396:-11.2983,0,-201.646	0/1:27:19,8:19:650:8:288:-18.1372,0,-50.6886	0/0:57:57,0:57:2025:0:0:0,-17.1587,-182.521	0/1:42:34,8:34:1220:8:288:-13.6241,0,-97.4635	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/1:21:19,2:19:676:2:72:-0.515093,0,-54.8464	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/0:36:36,0:36:1284:0:0:0,-10.8371,-115.863	0/1:51:45,6:45:1605:6:216:-4.43798,0,-129.386	0/1:29:26,3:26:932:3:104:-0.972935,0,-75.469	0/0:33:33,0:33:1188:0:0:0,-9.93399,-107.229	0/0:101:101,0:101:3616:0:0:0,-30.404,-325.646	0/1:58:44,14:44:1572:14:504:-28.2384,0,-124.312	0/0:33:33,0:33:1165:0:0:0,-9.93399,-105.155	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/0:25:25,0:25:892:0:0:0,-7.52575,-80.5997	0/0:23:23,0:23:805:0:0:0,-6.92369,-72.7675	0/1:143:117,26:117:4173:26:928:-40.791,0,-332.705	0/1:88:71,17:71:2544:17:608:-28.5614,0,-202.72	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/1:136:114,22:114:4065:22:792:-30.6656,0,-325.096	0/0:98:97,1:97:3461:1:36:0,-25.9027,-308.103	0/0:49:48,1:48:1712:1:36:0,-11.1522,-150.767	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	0/1:17:3,13:3:108:13:468:-37.2833,0,-4.89886	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/1:17:4,13:4:144:13:464:-36.98,0,-8.19611	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:106:106,0:106:3804:0:0:0,-31.9092,-342.557	0/0:63:63,0:63:2268:0:0:0,-18.9649,-203.755	0/1:61:44,17:44:1580:17:612:-37.0506,0,-124.129	0/0:19:19,0:19:669:0:0:0,-5.71957,-60.5339	0/1:110:96,14:96:3424:14:489:-11.2256,0,-275.262	0/0:21:21,0:21:741:0:0:0,-6.32163,-67.0116	0/0:61:61,0:61:2173:0:0:0,-18.3628,-195.835	0/0:23:23,0:23:828:0:0:0,-6.92369,-74.8441	0/0:26:26,0:26:921:0:0:0,-7.82678,-83.2052	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	0/0:73:72,1:72:2572:1:21:0,-19.8752,-229.63	0/1:48:36,12:36:1280:12:424:-23.7741,0,-101.054	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/0:55:55,0:55:1961:0:0:0,-16.5566,-176.763	0/0:11:11,0:11:396:0:0:0,-3.31133,-35.9827	0/1:91:78,13:78:2788:13:468:-15.0659,0,-223.767	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6642	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:47:47,0:47:1677:0:0:0,-14.1484,-151.215	0/0:8:8,0:8:273:0:0:0,-2.40824,-24.9002	0/1:5:3,2:3:108:2:68:-4.95256,0,-8.57002	0/0:22:22,0:22:773:0:0:0,-6.62266,-69.8895	0/1:40:35,5:35:1237:5:180:-4.51087,0,-99.5911	0/1:63:51,12:51:1836:12:432:-20.2563,0,-146.556	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:48:48,0:48:1716:0:0:0,-14.4494,-154.726	0/1:73:59,14:59:2086:14:504:-23.7229,0,-166.031	0/1:31:27,4:27:957:4:144:-3.98169,0,-77.1119	0/1:23:18,5:18:640:5:180:-9.62837,0,-51.0056	0/0:49:49,0:49:1764:0:0:0,-14.7505,-159.044	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.077	0/1:28:20,8:20:720:8:288:-17.8386,0,-56.6999	0/0:30:30,0:30:1072:0:0:0,-9.0309,-96.7925	0/0:58:58,0:58:2065:0:0:0,-17.4597,-186.119	0/1:24:16,8:16:576:8:280:-18.3146,0,-44.9503	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/1:30:27,3:27:942:3:108:-1.04427,0,-76.0589	0/1:73:54,19:54:1921:19:680:-39.554,0,-151.19	0/0:28:28,0:28:993:0:0:0,-8.42884,-89.6825	0/1:50:41,9:41:1468:9:320:-14.0909,0,-117.365	0/0:64:64,0:64:2273:0:0:0,-19.2659,-204.831	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	0/1:38:32,6:32:1152:6:216:-8.35137,0,-92.551	0/1:18:14,4:14:496:4:136:-7.157,0,-39.5557	0/0:44:44,0:44:1564:0:0:0,-13.2453,-141.052	0/0:41:38,3:38:1368:3:108:0,-2.26706,-113.346	0/1:27:24,3:24:864:3:108:-1.94736,0,-69.9548	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:33:33,0:33:1176:0:0:0,-9.93399,-106.148	0/1:18:13,5:13:468:5:176:-10.7663,0,-37.0411	0/1:46:30,16:30:1080:16:568:-37.6045,0,-83.6659	0/1:131:79,52:79:2815:52:1872:-129.324,0,-214.155	0/1:35:20,15:20:716:15:540:-38.4005,0,-54.2317	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134
chr11	31911144	.	GAG	AAA,AAG	618867	PASS	AB=0.515087,0.482955;ABP=25.2219,31.362;AC=142,46;AF=0.755319,0.244681;AN=188;AO=17399,5496;CIGAR=1X1M1X,1X2M;DP=22966;DPB=22967.7;DPRA=0,1.29236;EPP=37784.5,11937.4;EPPR=5.18177;GTI=0;LEN=3,1;MEANALT=2.30851,2.61905;MQM=59.9607,59.9803;MQMR=60;NS=94;NUMALT=2;ODDS=9.96213;PAIRED=0,0;PAIREDR=0;PAO=4.5,0.5;PQA=90,18;PQR=0;PRO=0;QA=610016,196522;QR=36;RO=1;RPL=9689,3071;RPP=491.8,167.892;RPPR=5.18177;RPR=7710,2425;RUN=1,1;SAF=9689,3071;SAP=491.8,167.892;SAR=7710,2425;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:148:0,148,0:0:0:148,0:5109,0:-459.962,-44.5524,0,-459.962,-44.5524,-459.962	1/2:345:0,195,149:0:0:195,149:6841,5338:-991.831,-435.338,-376.637,-556.488,0,-511.634	1/2:401:0,221,179:0:0:221,179:7692,6393:-1146.67,-521.216,-454.689,-625.449,0,-571.564	1/2:637:0,367,268:0:0:367,268:12926,9579:-1833.37,-781.026,-670.548,-1052.34,0,-971.661	1/2:148:0,87,61:0:0:87,61:3045,2192:-426.917,-179.183,-152.993,-248.09,0,-229.727	1/2:131:0,68,63:0:0:68,63:2367,2254:-376.621,-184.158,-163.688,-192.816,0,-173.851	1/1:333:0,333,0:0:0:333,0:11628,0:-1046.41,-100.243,0,-1046.41,-100.243,-1046.41	1/2:423:0,243,179:0:0:243,179:8525,6428:-1218.12,-524.361,-451.21,-693.759,0,-639.875	1/2:340:0,164,175:0:0:164,175:5698,6222:-970.334,-507.109,-457.74,-463.296,0,-410.616	1/1:281:0,279,0:0:0:279,0:9817,0:-883.208,-83.9874,0,-883.208,-83.9874,-883.208	1/2:114:0,59,53:0:0:59,53:2028,1904:-320,-155.323,-137.563,-164.669,0,-148.714	1/1:217:0,215,1:0:0:215,1:7427,36:-668.069,-64.7215,0,-665.132,-61.784,-664.831	1/2:171:0,90,80:0:0:90,80:3128,2835:-485.252,-230.946,-203.853,-254.297,0,-230.215	1/1:168:0,167,0:0:0:167,0:5834,0:-524.821,-50.272,0,-524.821,-50.272,-524.821	1/1:172:1,170,1:1:36:170,1:6004,36:-536.875,-48.2377,0,-534.238,-48.2377,-536.875	1/1:158:0,157,0:0:0:157,0:5558,0:-500.072,-47.2617,0,-500.072,-47.2617,-500.072	1/2:131:0,73,58:0:0:73,58:2562,2076:-378.15,-169.651,-147.676,-208.854,0,-191.394	1/2:125:0,65,60:0:0:65,60:2308,2141:-362.953,-174.894,-155.327,-188.414,0,-170.353	1/1:98:0,96,1:0:0:96,1:3371,36:-303.248,-28.8989,0,-300.311,-25.9615,-300.009	1/1:549:0,546,1:0:0:546,1:19217,36:-1728.79,-164.362,0,-1725.85,-161.412,-1725.55	1/2:488:0,231,256:0:0:231,256:7989,9146:-1394.98,-745.818,-676.28,-649.287,0,-572.223	1/1:252:0,252,0:0:0:252,0:8865,0:-797.832,-75.8596,0,-797.832,-75.8596,-797.832	1/2:259:0,128,131:0:0:128,131:4488,4686:-747.67,-382.463,-343.931,-365.561,0,-326.126	1/1:323:0,293,29:0:0:293,29:10292,1040:-925.84,-88.2018,0,-841.013,-3.37708,-832.283	1/1:327:0,326,0:0:0:326,0:11407,0:-1026.26,-98.1358,0,-1026.26,-98.1358,-1026.26	1/2:721:0,358,363:0:0:358,363:12595,13017:-2087.34,-1062.06,-954.292,-1025.63,0,-916.36	1/2:773:0,388,385:0:0:388,385:13638,13768:-2233.05,-1123,-1006.2,-1110.4,0,-994.507	1/2:79:0,54,25:0:0:54,25:1926,879:-228.91,-71.901,-55.6454,-157.362,0,-149.836	1/2:718:0,374,343:0:0:374,343:13106,12262:-2066.4,-999.958,-887.373,-1066.58,0,-963.331	1/1:306:0,294,12:0:0:294,12:10315,432:-927.932,-88.5028,0,-892.682,-52.894,-889.07	1/1:330:0,324,5:0:0:324,5:11253,180:-1011.72,-97.5337,0,-997.031,-82.7801,-995.525	1/2:8:0,5,3:0:0:5,3:169,108:-22.8575,-9.17208,-7.66693,-14.037,0,-13.134	1/2:32:0,20,12:0:0:20,12:695,432:-92.0853,-35.6088,-29.5882,-56.8316,0,-53.2193	1/1:13:0,13,0:0:0:13,0:432,0:-39.1989,-3.91339,0,-39.1989,-3.91339,-39.1989	1/2:9:0,2,7:0:0:2,7:63,252:-25.978,-20.9217,-20.3197,-5.38109,0,-3.27388	1/1:20:0,20,0:0:0:20,0:688,0:-62.2373,-6.0206,0,-62.2373,-6.0206,-62.2373	1/1:464:0,458,2:0:0:458,2:16149,72:-1452.79,-137.872,0,-1446.92,-131.976,-1446.32	1/1:228:0,226,1:0:0:226,1:7941,36:-714.422,-68.0328,0,-711.484,-65.0401,-711.183	1/2:123:0,76,47:0:0:76,47:2667,1677:-354.112,-137.068,-114.189,-217.399,0,-203.251	1/1:9:0,9,0:0:0:9,0:301,0:-27.4131,-2.70927,0,-27.4131,-2.70927,-27.4131	1/2:306:0,157,149:0:0:157,149:5509,5336:-883.782,-435.458,-388.196,-448.619,0,-403.766	1/1:76:0,75,0:0:0:75,0:2661,0:-239.375,-22.5773,0,-239.375,-22.5773,-239.375	1/1:431:0,430,0:0:0:430,0:15175,0:-1365.19,-129.443,0,-1365.19,-129.443,-1365.19	1/1:178:0,177,0:0:0:177,0:6211,0:-558.736,-53.2823,0,-558.736,-53.2823,-558.736	1/1:165:0,163,0:0:0:163,0:5776,0:-519.617,-49.0679,0,-519.617,-49.0679,-519.617	1/1:280:0,279,0:0:0:279,0:9783,0:-880.223,-83.9874,0,-880.223,-83.9874,-880.223	1/2:362:0,197,164:0:0:197,164:6922,5887:-1043.61,-480.209,-420.906,-563.394,0,-514.025	1/1:525:0,522,1:0:0:522,1:18342,36:-1650.11,-157.138,0,-1647.17,-154.167,-1646.87	1/2:181:0,95,86:0:0:95,86:3316,3069:-520.261,-250.55,-221.952,-270.064,0,-244.175	1/1:369:0,368,0:0:0:368,0:12951,0:-1165.17,-110.779,0,-1165.17,-110.779,-1165.17	1/1:352:0,352,0:0:0:352,0:12389,0:-1114.69,-105.963,0,-1114.69,-105.963,-1114.69	1/1:28:0,28,0:0:0:28,0:1004,0:-90.6761,-8.42884,0,-90.6761,-8.42884,-90.6761	1/2:297:0,144,153:0:0:144,153:5053,5472:-857.77,-446.55,-403.202,-411.574,0,-365.516	1/1:96:0,96,0:0:0:96,0:3363,0:-302.889,-28.8989,0,-302.889,-28.8989,-302.889	1/1:19:0,19,0:0:0:19,0:682,0:-61.7017,-5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chr12	1006179	.	A	G	156758	PASS	AB=0.519515;ABP=24.283;AC=142;AF=0.755319;AN=188;AO=7695;CIGAR=1X;DP=10797;DPB=10797;DPRA=0;EPP=16599.8;EPPR=6645.77;GTI=1;LEN=1;MEANALT=1.07447;MQM=59.9871;MQMR=59.9929;NS=94;NUMALT=1;ODDS=0.690379;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=272899;QR=109409;RO=3095;RPL=7682;RPP=16599.8;RPPR=6645.77;RPR=13;RUN=1;SAF=7693;SAP=16695.1;SAR=2;SRF=3095;SRP=6723.72;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:22:11,11:11:392:11:380:-27.9093,0,-28.9974	1/1:38:0,38:0:0:38:1364:-123.061,-11.4391,0	0/1:55:29,26:29:1008:26:905:-65.2056,0,-74.4714	1/1:144:0,143:0:0:143:5086:-457.684,-43.0473,0	0/1:24:15,9:15:536:9:324:-22.2811,0,-41.3501	0/1:32:14,18:14:500:18:620:-46.4872,0,-35.7032	1/1:63:1,62:1:36:62:2170:-191.966,-15.3666,0	0/1:78:33,45:33:1160:45:1593:-120.18,0,-81.2263	1/1:52:0,52:0:0:52:1838:-165.699,-15.6536,0	1/1:54:0,54:0:0:54:1921:-173.165,-16.2556,0	1/1:255:2,253:2:72:253:8935:-797.3,-69.9259,0	0/1:58:28,30:28:1008:30:1055:-77.7692,0,-73.5766	1/1:55:0,55:0:0:55:1946:-175.415,-16.5567,0	1/1:34:0,33:0:0:33:1157:-104.075,-9.93399,0	1/1:46:0,46:0:0:46:1630:-146.987,-13.8474,0	0/1:21:12,9:12:419:9:307:-21.6386,0,-31.721	1/1:12:0,12:0:0:12:424:-38.4964,-3.61236,0	1/1:20:0,20:0:0:20:707:-63.9546,-6.0206,0	1/1:94:0,94:0:0:94:3338:-300.638,-28.2968,0	0/1:77:55,22:55:1960:22:779:-47.2528,0,-153.496	1/1:84:1,83:1:36:83:2950:-262.136,-21.6882,0	1/1:30:0,30:0:0:30:1068:-96.4321,-9.0309,0	1/1:82:0,82:0:0:82:2861:-257.727,-24.6845,0	1/1:41:0,41:0:0:41:1459:-131.605,-12.3422,0	0/1:52:18,34:18:640:34:1220:-94.4532,0,-42.2758	0/1:148:74,74:74:2613:74:2652:-194.374,0,-190.866	1/1:121:0,121:0:0:121:4275:-384.932,-36.4246,0	1/1:22:0,22:0:0:22:773:-69.8895,-6.62266,0	0/1:125:59,66:59:2100:66:2360:-175.03,0,-151.641	0/1:74:31,43:31:1089:43:1535:-116.166,0,-76.0411	1/1:50:0,50:0:0:50:1788:-161.203,-15.0515,0	0/1:487:236,250:236:8388:250:8833:-648.306,0,-608.274	0/1:440:277,163:277:9819:163:5819:-391.371,0,-751.211	0/1:77:36,41:36:1276:41:1452:-107.795,0,-91.9638	0/1:442:258,184:258:9072:184:6503:-452.307,0,-683.418	1/1:624:0,624:0:0:624:22235:-2000.58,-187.843,0	0/1:83:30,53:30:1059:53:1850:-141.79,0,-70.6349	0/1:43:25,18:25:876:18:644:-45.3463,0,-66.2128	1/1:187:0,187:0:0:187:6654:-598.939,-56.2926,0	0/1:155:81,74:81:2869:74:2652:-192.266,0,-211.788	0/1:81:28,53:28:992:53:1880:-145.093,0,-65.211	0/1:155:70,85:70:2488:85:3006:-224.111,0,-177.514	1/1:77:0,77:0:0:77:2745:-247.293,-23.1793,0	1/1:42:0,42:0:0:42:1482:-133.672,-12.6433,0	1/1:38:0,38:0:0:38:1326:-119.635,-11.4391,0	0/1:51:21,30:21:752:30:1072:-81.4399,0,-52.6537	1/1:31:0,31:0:0:31:1101:-99.3997,-9.33193,0	1/1:176:0,176:0:0:176:6250:-562.598,-52.9813,0	1/1:39:0,39:0:0:39:1387:-125.128,-11.7402,0	1/1:63:0,63:0:0:63:2256:-203.303,-18.9649,0	0/1:44:22,22:22:780:22:792:-58.3604,0,-57.2777	0/1:349:144,205:144:5107:205:7285:-550.645,0,-354.719	1/1:43:0,43:0:0:43:1536:-138.533,-12.9443,0	1/1:30:0,30:0:0:30:1067:-96.3412,-9.0309,0	1/1:260:0,260:0:0:260:9173:-825.551,-78.2678,0	1/1:58:0,58:0:0:58:2067:-186.3,-17.4597,0	1/1:58:0,58:0:0:58:2067:-186.3,-17.4597,0	0/1:380:91,288:91:3220:288:10231:-806.275,0,-175.573	0/1:384:181,203:181:6421:203:7226:-534.801,0,-462.385	0/1:57:35,22:35:1240:22:784:-53.7252,0,-94.7457	0/1:41:19,22:19:684:22:779:-58.0898,0,-49.5481	1/1:470:2,468:2:72:468:16620:-1488.62,-134.647,0	1/1:76:0,76:0:0:76:2700:-243.244,-22.8783,0	0/1:62:25,37:25:885:37:1328:-101.158,0,-61.3027	0/1:14:2,12:2:72:12:428:-34.6444,0,-2.6223	0/1:29:15,14:15:536:14:492:-35.8825,0,-39.8449	0/1:78:51,27:51:1785:27:955:-62.7845,0,-137.26	0/1:76:46,30:46:1617:30:1076:-74.2746,0,-122.939	0/1:272:125,147:125:4456:147:5154:-382.12,0,-319.332	1/1:45:0,45:0:0:45:1586:-143.029,-13.5464,0	0/1:26:15,11:15:527:11:387:-27.3392,0,-39.9334	0/1:468:214,253:214:7551:253:9014:-670.299,0,-538.699	0/1:53:17,36:17:595:36:1288:-100.269,0,-37.9221	0/1:70:35,35:35:1252:35:1247:-91.462,0,-91.913	0/1:62:32,30:32:1136:30:1046:-75.7772,0,-83.885	1/1:73:0,73:0:0:73:2599:-234.158,-21.9752,0	0/1:74:28,46:28:996:46:1636:-125.252,0,-67.6787	0/1:76:33,43:33:1161:43:1499:-112.321,0,-81.9165	0/1:386:213,173:213:7434:173:6165:-438.753,0,-552.923	1/1:48:1,47:1:36:47:1670:-146.988,-10.8512,0	1/1:22:0,22:0:0:22:772:-69.7994,-6.62266,0	1/1:70:1,69:1:36:69:2436:-215.897,-17.4738,0	1/1:42:0,42:0:0:42:1480:-133.492,-12.6433,0	1/1:38:0,37:0:0:37:1317:-118.47,-11.1381,0	1/1:31:0,31:0:0:31:1100:-99.3103,-9.33193,0	0/1:83:45,38:45:1594:38:1318:-93.9296,0,-118.763	1/1:21:0,21:0:0:21:747:-67.5543,-6.32163,0	0/1:36:14,22:14:496:22:757:-57.6089,0,-34.1372	1/1:53:0,53:0:0:53:1882:-169.657,-15.9546,0	1/1:269:0,268:0:0:268:9495:-854.154,-80.676,0	0/1:482:219,263:219:7692:263:9294:-691.342,0,-547.228	0/1:49:25,24:25:868:24:842:-61.3466,0,-63.6825	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:79:0,79:0:0:79:2779:-250.35,-23.7814,0
chr12	1208107	.	A	C	334294	PASS	AB=0.495889;ABP=4.24209;AC=142;AF=0.755319;AN=188;AO=12585;CIGAR=1X;DP=16839;DPB=16839;DPRA=0;EPP=27331;EPPR=9223.08;GTI=0;LEN=1;MEANALT=1.04255;MQM=59.3448;MQMR=59.9847;NS=94;NUMALT=1;ODDS=10.2908;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=443690;QR=150839;RO=4250;RPL=6813;RPP=189.993;RPPR=5.51388;RPR=5772;RUN=1;SAF=6813;SAP=189.993;SAR=5772;SRF=2161;SRP=5.65899;SRR=2089;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:127:74,53:74:2648:53:1869:-130.174,0,-200.336	1/1:150:0,150:0:0:150:5328:-479.383,-45.1545,0	0/1:302:166,136:166:5912:136:4829:-343.432,0,-441.279	1/1:428:0,428:0:0:428:15001:-1348.65,-128.841,0	0/1:122:59,63:59:2102:63:2213:-162.694,0,-152.722	0/1:53:29,24:29:1023:24:852:-61.0458,0,-76.4271	1/1:147:0,147:0:0:147:5136:-461.801,-44.2514,0	0/1:264:130,134:130:4566:134:4753:-348.348,0,-331.629	1/1:132:0,132:0:0:132:4614:-415.324,-39.736,0	1/1:141:0,141:0:0:141:4926:-443.307,-42.4452,0	1/1:156:0,156:0:0:156:5475:-492.757,-46.9607,0	0/1:234:124,110:124:4389:110:3866:-277.65,0,-324.746	1/1:146:1,145:1:36:145:5098:-455.297,-40.3521,0	1/1:117:0,117:0:0:117:4078:-367.169,-35.2205,0	1/1:100:0,100:0:0:100:3532:-317.809,-30.103,0	0/1:155:76,79:76:2694:79:2823:-207.55,0,-196.045	1/1:90:1,89:1:36:89:3124:-277.753,-23.4944,0	1/1:58:0,58:0:0:58:2059:-185.546,-17.4597,0	1/1:92:0,92:0:0:92:3264:-293.34,-27.6948,0	0/1:324:164,160:164:5832:160:5642:-410.202,0,-427.461	1/1:206:0,206:0:0:206:7237:-650.939,-62.0122,0	1/1:153:0,153:0:0:153:5413:-487.056,-46.0576,0	1/1:310:2,308:2:72:308:10811:-965.291,-86.4826,0	1/1:161:0,161:0:0:161:5656:-509.074,-48.4658,0	0/1:123:57,66:57:2052:66:2322:-172.167,0,-147.925	0/1:522:246,276:246:8775:276:9773:-722.22,0,-632.601	1/1:424:0,424:0:0:424:15047:-1352.87,-127.637,0	1/1:70:0,70:0:0:70:2466:-222.068,-21.0721,0	0/1:604:292,312:292:10413:312:11012:-808.555,0,-755.272	0/1:214:123,91:123:4366:91:3233:-226.695,0,-328.696	1/1:197:3,194:3:108:194:6796:-601.099,-49.2277,0	0/1:17:12,5:12:428:5:180:-11.4117,0,-33.7413	0/1:30:12,18:12:428:18:636:-48.5279,0,-29.8279	0/1:57:43,14:43:1536:14:500:-28.1579,0,-121.374	0/1:16:9,7:9:320:7:252:-17.8872,0,-24.3259	1/1:22:0,22:0:0:22:779:-70.4321,-6.62266,0	0/1:384:205,178:205:7233:178:6278:-449.251,0,-535.379	0/1:164:78,86:78:2761:86:3047:-225.067,0,-199.363	1/1:116:0,116:0:0:116:4059:-365.429,-34.9195,0	0/1:4:2,2:2:72:2:72:-5.6326,0,-5.6326	0/1:265:118,147:118:4213:147:5145:-382.69,0,-299.571	0/1:71:43,28:43:1516:28:981:-67.2279,0,-115.36	1/1:337:3,334:3:108:334:11848:-1055.89,-91.3724,0	1/1:201:0,201:0:0:201:7060:-635.433,-60.507,0	1/1:110:0,110:0:0:110:3878:-349.051,-33.1133,0	0/1:198:99,99:99:3515:99:3473:-253.002,0,-256.955	1/1:132:1,131:1:36:131:4634:-413.585,-36.1377,0	1/1:387:2,385:2:72:385:13574:-1214.32,-109.662,0	1/1:147:0,147:0:0:147:5173:-464.356,-44.2514,0	1/1:287:0,287:0:0:287:10152:-913.289,-86.3956,0	0/1:221:102,119:102:3590:119:4218:-313.173,0,-256.781	0/1:19:13,6:13:468:6:212:-13.6995,0,-36.7401	1/1:184:0,183:0:0:183:6512:-585.716,-55.0885,0	1/1:143:1,142:1:36:142:4991:-445.664,-39.449,0	1/1:14:0,14:0:0:14:481:-43.6151,-4.21442,0	1/1:272:1,271:1:36:271:9559:-856.403,-78.2819,0	1/1:100:0,100:0:0:100:3546:-319.068,-30.103,0	0/1:42:16,26:16:572:26:926:-71.0093,0,-39.1702	0/1:36:18,18:18:644:18:631:-46.2335,0,-47.4535	0/1:107:55,52:55:1949:52:1837:-133.299,0,-143.474	0/1:176:87,89:87:3067:89:3172:-232.72,0,-223.275	1/1:22:0,22:0:0:22:784:-70.8723,-6.62266,0	1/1:341:0,341:0:0:341:12027:-1081.49,-102.651,0	0/1:339:186,153:186:6611:153:5417:-385.072,0,-492.994	0/1:106:14,92:14:500:92:3245:-260.335,0,-13.427	0/1:158:89,69:89:3163:69:2388:-167.591,0,-237.333	0/1:476:218,257:218:7676:257:9053:-670.81,0,-547.533	0/1:185:106,79:106:3783:79:2824:-198.617,0,-284.979	0/1:110:56,54:56:1971:54:1883:-136.607,0,-144.551	1/1:100:0,100:0:0:100:3550:-319.66,-30.103,0	0/1:81:38,43:38:1352:43:1527:-113.336,0,-97.5969	0/1:33:12,21:12:428:21:741:-57.0753,0,-28.9248	0/1:164:73,91:73:2575:91:3175:-236.261,0,-182.629	0/1:171:87,84:87:3100:84:2947:-213.9,0,-227.75	0/1:320:158,162:158:5617:162:5725:-418.256,0,-409.325	1/1:309:1,308:1:32:308:10850:-971.847,-89.819,0	0/1:243:128,115:128:4524:115:4075:-293.73,0,-334.178	0/1:244:115,129:115:4088:129:4532:-334.435,0,-294.652	0/1:29:11,18:11:378:18:631:-48.3854,0,-25.611	1/1:209:1,208:1:27:208:7296:-653.648,-60.2155,0	1/1:247:1,246:1:36:246:8707:-779.841,-70.7561,0	1/1:464:1,462:1:32:462:16330:-1465.55,-136.517,0	1/1:118:0,118:0:0:118:4173:-375.655,-35.5215,0	1/1:109:0,109:0:0:109:3840:-345.726,-32.8123,0	1/1:86:0,86:0:0:86:3011:-271.213,-25.8886,0	0/1:283:146,137:146:5171:137:4801:-346.916,0,-380.34	1/1:97:0,97:0:0:97:3442:-309.875,-29.1999,0	0/1:147:76,71:76:2685:71:2470:-178.132,0,-197.64	1/1:158:0,158:0:0:158:5544:-498.929,-47.5627,0	1/1:84:0,84:0:0:84:2978:-268.237,-25.2865,0	0/1:216:101,115:101:3612:115:4034:-298.207,0,-260.264	0/1:237:163,74:163:5782:74:2618:-164.489,0,-449.156	1/1:129:0,129:0:0:129:4563:-410.682,-38.8329,0	1/1:243:2,241:2:72:241:8455:-753.79,-66.3136,0
chr12	1208114	.	AT	GC,AC	448461	PASS	AB=0.487861,0.509375;ABP=13.6599,9.36186;AC=142,46;AF=0.755319,0.244681;AN=188;AO=12286,4255;CIGAR=2X,1M1X;DP=16582;DPB=16588.5;DPRA=0,1.46361;EPP=26681.7,9225.26;EPPR=11.6962;GTI=0;LEN=2,1;MEANALT=1.96809,2.41379;MQM=59.3437,59.9793;MQMR=60;NS=94;NUMALT=2;ODDS=7.29106;PAIRED=0,0;PAIREDR=0;PAO=13,0;PQA=460,0;PQR=0;PRO=0;QA=431992,151208;QR=144;RO=4;RPL=6368,2181;RPP=38.8009,8.85312;RPPR=5.18177;RPR=5918,2074;RUN=1,1;SAF=6368,2179;SAP=38.8009,8.42444;SAR=5918,2076;SRF=3;SRP=5.18177;SRR=1;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:128:0,48,79:0:0:48,79:1661,2827:-365.434,-230.527,-216.078,-134.897,0,-111.116	1/1:137:0,137,0:0:0:137,0:4813,0:-433.191,-41.2411,0,-433.191,-41.2411,-433.191	1/2:287:0,124,162:0:0:124,162:4364,5794:-827.455,-472.524,-435.197,-355.004,0,-306.237	1/1:431:0,429,0:0:0:429,0:15034,0:-1351.84,-129.142,0,-1351.84,-129.142,-1351.84	1/2:119:0,61,58:0:0:61,58:2152,2066:-343.967,-168.751,-150.388,-175.571,0,-158.111	1/2:48:0,18,30:0:0:18,30:646,1052:-138.654,-85.9568,-80.5383,-53.0528,0,-44.0219	1/1:151:0,151,0:0:0:151,0:5287,0:-475.363,-45.4555,0,-475.363,-45.4555,-475.363	1/2:262:0,130,132:0:0:130,132:4582,4645:-751.405,-378.464,-339.33,-373.293,0,-333.557	1/1:120:0,120,0:0:0:120,0:4229,0:-380.728,-36.1236,0,-380.728,-36.1236,-380.728	1/1:140:0,140,0:0:0:140,0:4898,0:-440.791,-42.1442,0,-440.791,-42.1442,-440.791	1/1:159:0,158,1:0:0:158,1:5529,36:-497.223,-47.5627,0,-494.285,-44.2655,-493.984	1/2:227:0,104,122:0:0:104,122:3643,4325:-648.82,-352.449,-321.142,-296.471,0,-259.746	1/1:135:0,135,0:0:0:135,0:4703,0:-423.384,-40.6391,0,-423.384,-40.6391,-423.384	1/1:116:0,116,0:0:0:116,0:4035,0:-363.209,-34.9195,0,-363.209,-34.9195,-363.209	1/1:101:0,101,0:0:0:101,0:3583,0:-322.446,-30.404,0,-322.446,-30.404,-322.446	1/2:157:0,80,77:0:0:80,77:2810,2722:-450.664,-222.042,-197.96,-228.974,0,-205.794	1/1:86:1,85,0:1:36:85,0:3010,0:-267.497,-22.2903,0,-267.798,-25.5876,-270.735	1/1:57:0,57,0:0:0:57,0:2010,0:-181.137,-17.1587,0,-181.137,-17.1587,-181.137	1/1:88:0,88,0:0:0:88,0:3124,0:-280.663,-26.4906,0,-280.663,-26.4906,-280.663	1/2:325:0,158,167:0:0:158,167:5605,5950:-941.74,-485.333,-437.771,-456.762,0,-406.49	1/1:193:0,193,0:0:0:193,0:6751,0:-606.866,-58.0988,0,-606.866,-58.0988,-606.866	1/1:154:0,154,0:0:0:154,0:5468,0:-491.94,-46.3586,0,-491.94,-46.3586,-491.94	1/1:307:0,305,2:0:0:305,2:10766,72:-967.361,-91.8142,0,-961.486,-85.5795,-960.884	1/1:156:0,156,0:0:0:156,0:5531,0:-497.826,-46.9607,0,-497.826,-46.9607,-497.826	1/2:120:1,65,53:1:36:65,53:2304,1881:-337.668,-150.315,-133.686,-184.712,0,-171.695	1/2:525:0,277,248:0:0:277,248:9726,8792:-1507.95,-716.616,-633.231,-791.682,0,-717.027	1/1:394:0,393,0:0:0:393,0:13842,0:-1244.8,-118.305,0,-1244.8,-118.305,-1244.8	1/1:71:0,71,0:0:0:71,0:2492,0:-224.437,-21.3731,0,-224.437,-21.3731,-224.437	1/2:601:0,306,293:0:0:306,293:10782,10404:-1725.2,-847.851,-755.736,-877.474,0,-789.272	1/2:213:0,89,123:0:0:89,123:3143,4415:-616.112,-360.235,-333.444,-255.974,0,-218.947	1/1:197:0,194,3:0:0:194,3:6810,108:-612.302,-58.3998,0,-603.489,-49.2277,-602.586	1/2:17:0,5,12:0:0:5,12:180,432:-50.2734,-35.6088,-34.1037,-15.0241,0,-11.4117	1/2:29:0,17,12:0:0:17,12:603,432:-84.7265,-35.6088,-30.4913,-49.4753,0,-45.8629	1/2:55:0,13,42:0:0:13,42:455,1492:-158.931,-121.931,-118.018,-37.3502,0,-24.7069	1/2:17:0,7,10:0:0:7,10:234,356:-48.2155,-29.3709,-27.2637,-19.1868,0,-16.1765	1/1:23:0,23,0:0:0:23,0:823,0:-74.393,-6.92369,0,-74.393,-6.92369,-74.393	1/2:389:1,182,204:1:36:182,204:6339,7260:-1103.71,-588.79,-536.94,-512.316,0,-453.843	1/2:166:0,85,81:0:0:85,81:2983,2888:-478.176,-235.451,-209.864,-242.757,0,-218.374	1/1:107:0,106,0:0:0:106,0:3756,0:-337.848,-31.9092,0,-337.848,-31.9092,-337.848	1/2:4:0,2,2:0:0:2,2:72,72:-12.1095,-6.23466,-5.6326,-6.23466,0,-5.6326	1/2:255:0,130,124:0:0:130,124:4596,4432:-735.297,-361.465,-322.331,-373.937,0,-336.609	1/2:67:0,26,41:0:0:26,41:915,1418:-190.058,-115.569,-107.742,-74.8383,0,-62.496	1/1:321:0,320,1:0:0:320,1:11239,36:-1010.91,-96.3296,0,-1007.97,-93.0324,-1007.67	1/1:202:0,201,0:0:0:201,0:7081,0:-636.962,-60.507,0,-636.962,-60.507,-636.962	1/1:110:0,110,0:0:0:110,0:3886,0:-349.586,-33.1133,0,-349.586,-33.1133,-349.586	1/2:202:1,100,100:1:36:100,100:3495,3543:-569.584,-285.731,-258.566,-281.262,0,-254.096	1/1:126:0,126,0:0:0:126,0:4455,0:-401.078,-37.9298,0,-401.078,-37.9298,-401.078	1/1:383:0,381,2:0:0:381,2:13330,72:-1198.02,-114.692,0,-1192.15,-108.458,-1191.55	1/1:146:0,145,0:0:0:145,0:5126,0:-461.16,-43.6494,0,-461.16,-43.6494,-461.16	1/1:288:0,288,0:0:0:288,0:10158,0:-913.406,-86.6966,0,-913.406,-86.6966,-913.406	1/2:224:0,118,105:0:0:118,105:4136,3708:-638.405,-301.955,-266.434,-336.442,0,-304.834	1/2:19:0,6,13:0:0:6,13:216,468:-56.1637,-38.5463,-36.7401,-17.9772,0,-14.0638	1/1:179:0,179,0:0:0:179,0:6371,0:-573.395,-53.8844,0,-573.395,-53.8844,-573.395	1/1:145:0,144,1:0:0:144,1:5099,36:-458.583,-43.3483,0,-455.646,-40.0511,-455.345	1/1:13:0,13,0:0:0:13,0:457,0:-41.464,-3.91339,0,-41.464,-3.91339,-41.464	1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chr12	2054699	.	AGCC	GGCT,AGCT	459839	PASS	AB=0.55114,0.446124;ABP=177.358,196.513;AC=145,43;AF=0.771277,0.228723;AN=188;AO=13703,3462;CIGAR=1X2M1X,3M1X;DP=17213;DPB=17272.5;DPRA=23.125,1.11062;EPP=29758.7,7520.65;EPPR=9.52472;GTI=3;LEN=4,1;MEANALT=2.05376,2.40678;MQM=57.9708,59.9864;MQMR=60;NS=94;NUMALT=2;ODDS=0.98382;PAIRED=0,0;PAIREDR=0;PAO=235.5,1.5;PQA=7559,54;PQR=0;PRO=1;QA=474430,123045;QR=102;RO=3;RPL=6114,1488;RPP=347.775,151.16;RPPR=3.73412;RPR=7589,1974;RUN=1,1;SAF=6114,1488;SAP=347.775,151.16;SAR=7589,1974;SRF=1;SRP=3.73412;SRR=2;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:54:0,47,7:0:0:47,7:1605,252:-150.802,-20.5879,-6.43947,-130.238,0,-128.13	1/1:271:0,271,0:0:0:271,0:9434,0:-847.789,-81.5791,0,-847.789,-81.5791,-847.789	1/2:234:1,140,93:1:30:140,93:4828,3313:-659.429,-267.7,-227.954,-389.688,0,-364.09	1/1:289:0,287,0:0:0:287,0:9949,0:-894.075,-86.3956,0,-894.075,-86.3956,-894.075	1/2:71:0,62,9:0:0:62,9:2182,324:-204.395,-26.7966,-8.13272,-177.958,0,-175.248	1/1:51:0,48,3:0:0:48,3:1672,108:-150.382,-14.4494,0,-141.569,-5.63719,-140.666	1/1:254:0,253,0:0:0:253,0:8712,0:-783.051,-76.1606,0,-783.051,-76.1606,-783.051	1/2:251:0,158,93:0:0:158,93:5512,3256:-713.109,-264.92,-217.358,-448.195,0,-420.199	1/1:165:0,165,0:0:0:165,0:5723,0:-514.833,-49.67,0,-514.833,-49.67,-514.833	1/1:233:0,230,0:0:0:230,0:7915,0:-711.496,-69.2369,0,-711.496,-69.2369,-711.496	1/1:176:0,175,0:0:0:175,0:6003,0:-539.302,-52.6803,0,-539.302,-52.6803,-539.302	1/2:149:0,73,75:0:0:73,75:2501,2660:-419.663,-216.74,-194.765,-202.942,0,-180.365	1/1:176:0,175,0:0:0:175,0:6072,0:-545.734,-52.6803,0,-545.734,-52.6803,-545.734	1/1:169:0,169,0:0:0:169,0:5712,0:-513.843,-50.8741,0,-513.843,-50.8741,-513.843	1/1:133:0,133,0:0:0:133,0:4605,0:-414.295,-40.037,0,-414.295,-40.037,-414.295	1/2:122:0,63,59:0:0:63,59:2148,2104:-345.593,-171.509,-152.544,-174.074,0,-156.313	1/1:131:0,130,0:0:0:130,0:4484,0:-402.733,-39.1339,0,-402.733,-39.1339,-402.733	1/1:163:0,163,0:0:0:163,0:5640,0:-507.241,-49.0679,0,-507.241,-49.0679,-507.241	1/1:99:0,99,0:0:0:99,0:3423,0:-307.729,-29.802,0,-307.729,-29.802,-307.729	1/2:503:0,267,234:0:0:267,234:9216,8307:-1424.32,-676.868,-596.493,-747.499,0,-677.058	1/2:354:0,197,156:0:0:197,156:6846,5544:-1007.7,-451.789,-392.486,-555.921,0,-508.96	1/2:93:0,66,27:0:0:66,27:2301,959:-265.218,-78.1764,-58.3084,-187.073,0,-178.946	1/1:105:0,105,0:0:0:105,0:3632,0:-326.846,-31.6082,0,-326.846,-31.6082,-326.846	1/1:228:0,217,10:0:0:217,10:7571,360:-680.625,-65.3235,0,-651.25,-35.9493,-648.24	1/2:108:0,92,16:0:0:92,16:3176,568:-304.488,-46.6354,-18.9406,-258.206,0,-253.389	1/2:575:0,318,253:0:0:318,253:11076,9001:-1633.49,-733.592,-637.864,-899.927,0,-823.767	1/1:459:0,456,1:0:0:456,1:15815,36:-1421.95,-137.27,0,-1419.01,-134.328,-1418.71	1/1:70:0,70,0:0:0:70,0:2416,0:-217.638,-21.0721,0,-217.638,-21.0721,-217.638	1/2:608:0,306,301:0:0:306,301:10565,10752:-1734.47,-876.614,-784.499,-857.847,0,-767.237	1/2:155:0,84,71:0:0:84,71:2856,2520:-436.832,-205.317,-180.031,-231.503,0,-210.13	1/1:153:0,152,1:0:0:152,1:5270,36:-473.699,-45.7566,0,-470.762,-42.4593,-470.461	1/1:8:0,8,0:0:0:8,0:288,0:-26.2627,-2.40824,0,-26.2627,-2.40824,-26.2627	1/2:25:0,13,12:0:0:13,12:458,428:-72.5201,-35.2464,-31.3331,-37.6281,0,-34.0157	1/1:6:0,6,0:0:0:6,0:205,0:-18.7824,-1.80618,0,-18.7824,-1.80618,-18.7824	1/2:8:0,7,1:0:0:7,1:250,32:-23.309,-2.89828,-0.791073,-20.7353,0,-20.4343	1/1:7:0,7,0:0:0:7,0:243,0:-21.8476,-2.10721,0,-21.8476,-2.10721,-21.8476	1/2:412:0,197,214:0:0:197,214:6744,7602:-1166.69,-619.452,-560.149,-547.239,0,-482.818	1/2:275:0,182,93:0:0:182,93:6306,3324:-783.717,-271.383,-216.595,-512.688,0,-484.692	1/1:172:0,171,1:0:0:171,1:5919,36:-532.105,-51.4761,0,-529.168,-48.5362,-528.867	2/2:8:0,0,8:0:0:0,8:0,269:-24.5361,-24.5361,-24.5361,-2.40824,-2.40824,0	1/2:214:0,117,96:0:0:117,96:4038,3372:-602.441,-274.487,-239.266,-327.992,0,-299.093	1/2:86:0,38,48:0:0:38,48:1326,1696:-246.298,-138.474,-127.035,-108.175,0,-93.7258	1/1:279:0,277,0:0:0:277,0:9587,0:-862.016,-83.3853,0,-862.016,-83.3853,-862.016	1/1:150:0,150,0:0:0:150,0:5200,0:-468.024,-45.1545,0,-468.024,-45.1545,-468.024	1/1:122:0,122,0:0:0:122,0:4163,0:-374.217,-36.7257,0,-374.217,-36.7257,-374.217	1/2:60:0,31,28:0:0:31,28:1063,995:-167.366,-81.0854,-71.7535,-86.28,0,-77.8511	1/1:274:1,270,2:1:36:270,2:9431,72:-844.62,-78.3383,0,-839.046,-75.3982,-841.381	1/1:344:0,342,1:0:0:342,1:11879,36:-1067.82,-102.952,0,-1064.88,-99.9929,-1064.58	1/1:206:0,205,1:0:0:205,1:7119,36:-640.145,-61.7112,0,-637.207,-58.7737,-636.906	1/1:244:0,243,0:0:0:243,0:8362,0:-751.926,-73.1503,0,-751.926,-73.1503,-751.926	1/2:320:0,176,144:0:0:176,144:6162,5125:-919.261,-418.043,-365.062,-501.571,0,-458.223	1/2:19:0,7,12:0:0:7,12:241,432:-55.1709,-35.6088,-33.5016,-19.9119,0,-16.2995	1/1:302:0,302,0:0:0:302,0:10505,0:-944.542,-90.9111,0,-944.542,-90.9111,-944.542	1/1:76:0,75,1:0:0:75,1:2587,36:-232.278,-22.5773,0,-229.341,-19.28,-229.04	1/1:23:0,23,0:0:0:23,0:808,0:-73.0279,-6.92369,0,-73.0279,-6.92369,-73.0279	1/1:287:0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chr12	4219669	.	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chr12	7080123	.	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chr12	8885942	.	A	G	208317	PASS	AB=0.526764;ABP=41.7167;AC=146;AF=0.776596;AN=188;AO=10143;CIGAR=1X;DP=13128;DPB=13128;DPRA=0;EPP=22028.3;EPPR=6474;GTI=0;LEN=1;MEANALT=1.05319;MQM=47.8354;MQMR=50.4057;NS=94;NUMALT=1;ODDS=5.82106;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=359507;QR=106701;RO=2980;RPL=10143;RPP=22028.3;RPPR=6474;RPR=0;RUN=1;SAF=0;SAP=22028.3;SAR=10143;SRF=0;SRP=6474;SRR=2980;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:57:28,29:28:1004:29:1028:-74.0333,0,-72.6204	1/1:277:3,274:3:108:274:9675:-847.797,-73.3797,0	0/1:214:90,124:90:3236:124:4416:-325.823,0,-223.929	1/1:353:0,353:0:0:353:12499:-1115.81,-106.264,0	0/1:110:49,61:49:1760:61:2158:-159.971,0,-124.204	0/1:64:22,42:22:788:42:1471:-111.594,0,-49.9447	1/1:226:0,226:0:0:226:7951:-710.098,-68.0328,0	0/1:213:122,91:122:4329:91:3244:-223.026,0,-319.655	1/1:107:0,107:0:0:107:3789:-336.064,-32.2102,0	1/1:158:0,157:0:0:157:5578:-496.718,-47.2617,0	1/1:23:0,23:0:0:23:765:-68.8384,-6.92369,0	1/1:64:0,64:0:0:64:2250:-199.414,-19.2659,0	1/1:51:0,51:0:0:51:1795:-158.352,-15.3525,0	1/1:51:0,51:0:0:51:1832:-163.971,-15.3525,0	1/1:56:0,56:0:0:56:2004:-179.389,-16.8577,0	1/1:52:0,52:0:0:52:1855:-165.695,-15.6536,0	1/1:65:0,65:0:0:65:2307:-203.356,-19.567,0	1/1:44:1,43:1:36:43:1532:-131.647,-9.67189,0	1/1:45:0,45:0:0:45:1592:-139.522,-13.5464,0	0/1:366:161,205:161:5762:205:7269:-540.005,0,-406.138	0/1:222:95,127:95:3400:127:4527:-334.463,0,-236.679	0/1:217:139,78:139:4992:78:2770:-181.86,0,-381.656	1/1:135:0,135:0:0:135:4733:-422.696,-40.6391,0	1/1:225:9,216:9:324:216:7605:-649.361,-38.6183,0	1/1:105:0,105:0:0:105:3716:-329.783,-31.6082,0	0/1:500:255,245:255:9151:245:8709:-627.756,0,-671.084	1/1:291:0,291:0:0:291:10321:-917.332,-87.5997,0	1/1:33:0,33:0:0:33:1158:-103.695,-9.93399,0	0/1:417:200,217:200:7172:217:7726:-565.342,0,-518.411	0/1:490:164,326:164:5865:326:11532:-878.238,0,-375.915	1/1:208:3,205:3:108:205:7302:-642.172,-52.5644,0	0/1:8:3,5:3:108:5:180:-14.0159,0,-7.6243	0/1:34:6,28:6:216:28:1000:-79.1807,0,-9.27771	1/1:4:0,4:0:0:4:128:-11.4,-1.20412,0	0/1:5:4,1:4:144:1:36:-2.05347,0,-11.7166	0/1:15:8,7:8:288:7:243:-16.8525,0,-21.5706	0/1:249:103,146:103:3704:146:5135:-384.986,0,-256.595	0/1:305:160,145:160:5726:145:5152:-366.558,0,-419.937	1/1:49:0,49:0:0:49:1716:-151.652,-14.7505,0	0/1:10:9,1:9:324:1:36:-0.563134,0,-26.3707	1/1:278:0,278:0:0:278:9859:-874.976,-83.6863,0	1/1:26:0,26:0:0:26:923:-82.8359,-7.82678,0	1/1:216:0,216:0:0:216:7656:-680.66,-65.0225,0	1/1:65:0,65:0:0:65:2299:-205.677,-19.567,0	0/1:64:23,41:23:816:41:1443:-110.049,0,-53.1659	0/1:141:79,62:79:2836:62:2203:-153.887,0,-212.44	1/1:193:4,189:4:144:189:6709:-579.429,-44.8908,0	1/1:366:0,366:0:0:366:12988:-1160.52,-110.177,0	1/1:157:0,157:0:0:157:5571:-498.355,-47.2617,0	1/1:260:1,258:1:36:258:9195:-816.996,-74.8184,0	0/1:225:107,118:107:3840:118:4180:-304.783,0,-276.62	1/1:18:0,18:0:0:18:640:-57.6889,-5.41854,0	1/1:179:0,179:0:0:179:6326:-561.07,-53.8844,0	1/1:77:0,77:0:0:77:2748:-244.998,-23.1793,0	0/1:32:24,8:24:852:8:276:-15.3168,0,-66.8704	1/1:189:1,188:1:36:188:6656:-587.843,-53.3116,0	1/1:88:1,87:1:36:87:3099:-273.427,-23.5099,0	0/1:16:9,7:9:324:7:248:-17.7326,0,-24.6125	0/1:26:14,12:14:485:12:432:-31.1106,0,-35.2882	1/1:91:0,91:0:0:91:3244:-289.15,-27.3937,0	0/1:87:43,44:43:1544:44:1567:-114.333,0,-112.03	1/1:17:0,17:0:0:17:608:-54.1265,-5.11751,0	1/1:347:0,346:0:0:346:12261:-1093.91,-104.156,0	0/1:296:139,157:139:4963:157:5611:-412.449,0,-355.312	1/1:94:6,88:6:216:88:3128:-259.783,-8.59005,0	0/1:130:57,73:57:2021:73:2582:-190.628,0,-140.396	0/1:331:160,171:160:5740:171:6041:-437.803,0,-413.974	0/1:146:100,46:100:3588:46:1654:-103.119,0,-277.501	0/1:29:11,18:11:396:18:644:-48.5134,0,-26.8337	0/1:134:58,76:58:2079:76:2691:-197.772,0,-144.656	0/1:80:48,32:48:1707:32:1140:-77.9146,0,-129.008	0/1:24:9,15:9:320:15:510:-38.6113,0,-21.6085	0/1:148:84,64:84:2997:64:2237:-154.231,0,-221.94	0/1:65:32,33:32:1148:33:1180:-85.1315,0,-83.3449	0/1:221:93,128:93:3318:128:4523:-335.289,0,-229.282	1/1:264:2,262:2:72:262:9254:-820.061,-72.7804,0	0/1:158:69,89:69:2475:89:3163:-230.498,0,-173.42	0/1:192:84,108:84:3012:108:3851:-283.189,0,-211.036	0/1:18:9,9:9:324:9:324:-23.7621,0,-23.6336	1/1:199:0,199:0:0:199:7094:-630.725,-59.905,0	1/1:149:0,149:0:0:149:5290:-467.314,-44.8535,0	1/1:321:0,321:0:0:321:11379:-1013.54,-96.6306,0	1/1:72:0,72:0:0:72:2556:-228.913,-21.6742,0	1/1:46:0,46:0:0:46:1630:-145.968,-13.8474,0	1/1:96:1,95:1:36:95:3373:-298.363,-25.4444,0	1/1:123:2,121:2:72:121:4294:-376.773,-30.2808,0	1/1:28:0,28:0:0:28:987:-86.6504,-8.42884,0	0/1:90:32,58:32:1152:58:2055:-155.174,0,-74.7224	1/1:65:0,65:0:0:65:2307:-205.082,-19.567,0	1/1:20:0,20:0:0:20:708:-63.2869,-6.0206,0	0/1:62:34,28:34:1224:28:987:-69.6152,0,-90.9741	0/1:10:8,2:8:275:2:72:-3.79749,0,-22.0193	1/1:147:1,145:1:36:145:5127:-453.353,-40.802,0	1/1:94:1,92:1:36:92:3249:-287.269,-24.7601,0
chr12	9274355	.	C	T	116288	PASS	AB=0.540749;ABP=40.3514;AC=138;AF=0.734043;AN=188;AO=5465;CIGAR=1X;DP=7794;DPB=7794;DPRA=0;EPP=11861.4;EPPR=5056.03;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.9855;MQMR=59.9854;NS=94;NUMALT=1;ODDS=0.519181;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=194350;QR=83094;RO=2327;RPL=0;RPP=11870.1;RPPR=5056.03;RPR=5465;RUN=1;SAF=1;SAP=11861.4;SAR=5464;SRF=0;SRP=5056.03;SRR=2327;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:26:14,11:14:500:11:384:-27.1473,0,-37.5906	1/1:87:1,86:1:36:86:3080:-273.83,-22.5913,0	0/1:64:23,41:23:828:41:1464:-112.79,0,-55.5782	1/1:88:0,88:0:0:88:3120:-281.028,-26.4906,0	0/1:19:6,13:6:212:13:464:-36.3779,0,-13.7052	0/1:22:8,14:8:288:14:500:-38.7135,0,-19.6447	1/1:53:0,53:0:0:53:1892:-170.558,-15.9546,0	0/1:43:30,13:30:1057:13:464:-29.1532,0,-82.4947	1/1:33:0,33:0:0:33:1171:-105.697,-9.93399,0	1/1:43:0,43:0:0:43:1540:-138.893,-12.9443,0	1/1:173:0,173:0:0:173:6177:-556.027,-52.0782,0	1/1:49:0,49:0:0:49:1737:-156.613,-14.7505,0	1/1:60:0,60:0:0:60:2130:-191.967,-18.0618,0	1/1:61:0,61:0:0:61:2169:-195.477,-18.3628,0	1/1:55:0,55:0:0:55:1972:-177.755,-16.5567,0	1/1:53:1,52:1:36:52:1843:-161.774,-12.3563,0	1/1:58:0,58:0:0:58:2064:-186.031,-17.4597,0	1/1:54:0,54:0:0:54:1899:-171.185,-16.2556,0	1/1:111:0,111:0:0:111:3984:-358.749,-33.4143,0	0/1:48:15,33:15:536:33:1176:-91.6983,0,-34.1254	0/1:50:28,22:28:1004:22:768:-54.3866,0,-75.6244	0/1:31:14,17:14:500:17:612:-46.0815,0,-36.0042	1/1:22:0,22:0:0:22:779:-70.4321,-6.62266,0	1/1:30:1,29:1:36:29:1021:-88.602,-5.43263,0	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	0/1:121:63,58:63:2251:58:2072:-150.326,0,-166.428	1/1:64:0,64:0:0:64:2276:-205.103,-19.2659,0	1/1:39:0,39:0:0:39:1390:-125.398,-11.7402,0	0/1:83:45,38:45:1616:38:1352:-96.9935,0,-120.745	0/1:111:61,50:61:2188:50:1777:-126.797,0,-163.771	1/1:72:0,72:0:0:72:2557:-230.379,-21.6742,0	0/0:85:84,1:84:3020:1:36:0,-21.9893,-267.495	0/0:152:150,2:150:5330:2:72:0,-38.9198,-472.998	1/1:217:1,216:1:36:216:7636:-683.687,-61.7252,0	0/0:108:107,1:107:3797:1:36:0,-28.913,-338.328	0/0:112:108,4:108:3876:4:144:0,-20.4017,-335.72	0/1:110:31,79:31:1108:79:2804:-219.487,0,-66.9177	0/1:91:37,54:37:1324:54:1916:-145.324,0,-92.0684	1/1:190:1,189:1:36:189:6692:-598.754,-53.5974,0	0/0:36:35,1:35:1229:1:36:0,-7.2388,-107.314	1/1:58:0,58:0:0:58:2046:-184.408,-17.4597,0	1/1:215:1,214:1:36:214:7594:-679.906,-61.1232,0	1/1:51:0,51:0:0:51:1811:-163.272,-15.3525,0	1/1:29:0,29:0:0:29:1035:-93.4631,-8.72987,0	0/1:39:11,28:11:396:28:1004:-78.9357,0,-24.2426	0/1:26:14,12:14:495:12:432:-31.3944,0,-37.0563	1/1:39:0,39:0:0:39:1400:-126.299,-11.7402,0	1/1:95:0,95:0:0:95:3393:-305.585,-28.5979,0	1/1:68:0,68:0:0:68:2416:-217.697,-20.47,0	1/1:76:0,76:0:0:76:2684:-241.805,-22.8783,0	0/1:89:51,38:51:1832:38:1333:-93.4761,0,-138.369	1/1:199:0,199:0:0:199:7080:-637.263,-59.905,0	1/1:66:0,66:0:0:66:2352:-211.939,-19.868,0	1/1:20:0,20:0:0:20:708:-64.0456,-6.0206,0	0/0:204:201,2:201:7196:2:72:0,-54.6322,-640.856	1/1:67:1,66:1:36:66:2360:-209.06,-16.5707,0	1/1:19:0,19:0:0:19:671:-60.7158,-5.71957,0	0/1:267:83,184:83:2984:184:6592:-512.985,0,-188.416	0/0:222:221,1:221:7926:1:36:0,-63.2304,-709.763	1/1:41:0,41:0:0:41:1424:-128.452,-12.3422,0	0/1:75:20,55:20:716:55:1959:-154.008,0,-42.1905	1/1:105:2,103:2:68:103:3658:-322.968,-25.1504,0	1/1:82:1,81:1:36:81:2888:-256.559,-21.0862,0	0/1:89:31,58:31:1112:58:2061:-158.969,0,-73.5997	1/1:78:1,77:1:36:77:2756:-244.684,-19.8821,0	0/1:30:20,10:20:720:10:356:-23.3503,0,-56.0979	0/1:42:17,25:17:612:25:884:-67.2351,0,-42.7702	0/1:32:17,15:17:612:15:536:-38.9419,0,-45.7805	0/0:122:111,11:111:3969:11:393:0,-1.01485,-321.689	0/1:37:9,28:9:324:28:1000:-79.1773,0,-18.3677	0/1:96:37,59:37:1328:59:2094:-159.83,0,-90.9234	1/1:132:0,132:0:0:132:4720:-424.954,-39.736,0	0/1:23:13,10:13:453:10:356:-25.4576,0,-34.1759	0/1:45:29,16:29:1023:16:550:-36.277,0,-78.8354	0/1:63:41,22:41:1457:22:788:-52.2799,0,-112.459	1/1:97:0,97:0:0:97:3451:-310.804,-29.1999,0	0/1:68:43,25:43:1544:25:887:-59.6781,0,-118.783	0/1:50:20,30:20:716:30:1061:-80.7487,0,-49.7162	0/0:108:107,1:107:3800:1:36:0,-28.913,-338.6	1/1:122:1,121:1:36:121:4276:-381.422,-33.1274,0	1/1:45:1,44:1:36:44:1559:-137.001,-9.94808,0	1/1:72:0,72:0:0:72:2571:-231.639,-21.6742,0	1/1:83:1,82:1:36:82:2920:-259.438,-21.3872,0	1/1:51:0,51:0:0:51:1816:-163.721,-15.3525,0	1/1:66:0,66:0:0:66:2329:-209.87,-19.868,0	1/1:98:1,97:1:27:97:3425:-305.763,-26.8012,0	1/1:37:0,37:0:0:37:1324:-119.462,-11.1381,0	0/1:52:28,24:28:996:24:860:-62.0683,0,-74.3013	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	1/1:197:0,197:0:0:197:7018:-631.678,-59.3029,0	0/1:619:312,307:312:11088:307:10910:-795.467,0,-811.481	0/1:28:17,11:17:604:11:388:-26.8285,0,-46.2618	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:69:0,69:0:0:69:2467:-222.283,-20.7711,0
chr12	9422965	.	C	G	194029	PASS	AB=0.509467;ABP=7.03944;AC=147;AF=0.781915;AN=188;AO=9097;CIGAR=1X;DP=11657;DPB=11657;DPRA=0;EPP=19756.9;EPPR=5548.95;GTI=1;LEN=1;MEANALT=1.06383;MQM=59.9926;MQMR=59.9745;NS=94;NUMALT=1;ODDS=1.35045;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=325165;QR=91450;RO=2554;RPL=0;RPP=19756.9;RPPR=5548.95;RPR=9097;RUN=1;SAF=9097;SAP=19756.9;SAR=0;SRF=2554;SRP=5548.95;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:33,21:33:1184:21:737:-50.395,0,-90.6127	1/1:187:0,186:0:0:186:6652:-598.399,-55.9916,0	0/1:129:56,73:56:1983:73:2616:-196.855,0,-139.911	1/1:278:0,278:0:0:278:9954:-895.798,-83.6863,0	0/1:103:44,59:44:1572:59:2116:-159.703,0,-110.766	0/1:78:39,39:39:1400:39:1392:-102.099,0,-102.819	1/1:223:0,223:0:0:223:7977:-717.951,-67.1297,0	0/1:159:91,68:91:3248:68:2408:-169.111,0,-244.678	1/1:98:0,98:0:0:98:3497:-314.94,-29.5009,0	1/1:143:0,143:0:0:143:5090:-458.243,-43.0473,0	1/1:85:0,85:0:0:85:3060:-275.627,-25.5876,0	1/1:89:0,89:0:0:89:3150:-283.724,-26.7917,0	1/1:73:0,73:0:0:73:2616:-235.688,-21.9752,0	1/1:83:0,83:0:0:83:2964:-266.994,-24.9855,0	1/1:73:0,73:0:0:73:2616:-235.688,-21.9752,0	1/1:89:0,89:0:0:89:3185:-286.872,-26.7917,0	1/1:63:0,63:0:0:63:2222:-200.241,-18.9649,0	1/1:59:0,59:0:0:59:2112:-190.349,-17.7608,0	1/1:78:0,78:0:0:78:2800:-252.24,-23.4803,0	0/1:283:120,163:120:4300:163:5808:-437.642,0,-301.985	0/1:195:90,105:90:3232:105:3775:-281.247,0,-232.4	0/1:216:155,61:155:5556:61:2173:-130.812,0,-435.141	1/1:125:3,122:3:108:122:4361:-382.588,-27.5536,0	1/1:159:4,155:4:144:155:5522:-483.791,-34.5502,0	1/1:85:0,85:0:0:85:3048:-274.549,-25.5876,0	0/1:339:135,204:135:4829:204:7302:-555.177,0,-332.714	1/1:225:0,225:0:0:225:8066:-725.953,-67.7318,0	1/1:48:0,48:0:0:48:1728:-155.782,-14.4494,0	0/1:295:161,134:161:5764:134:4797:-343.08,0,-430.072	0/1:178:64,114:64:2296:114:4081:-313.891,0,-153.318	1/1:167:0,167:0:0:167:5981:-538.394,-50.272,0	0/1:19:6,13:6:216:13:464:-36.3779,0,-14.0709	0/1:17:2,15:2:72:15:540:-43.819,0,-1.71921	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	0/1:8:2,6:2:68:6:216:-17.3823,0,-4.04947	0/1:15:2,13:2:72:13:449:-36.222,0,-2.32127	0/1:260:141,118:141:5052:118:4240:-303.451,0,-376.128	0/1:205:102,103:102:3656:103:3708:-272.209,0,-267.532	1/1:128:0,128:0:0:128:4589:-413.174,-38.5318,0	0/1:8:5,3:5:180:3:104:-7.29457,0,-14.1438	1/1:217:0,217:0:0:217:7743:-696.898,-65.3235,0	1/1:51:0,51:0:0:51:1832:-165.158,-15.3525,0	1/1:169:0,168:0:0:168:6003:-540.011,-50.573,0	1/1:106:1,105:1:32:105:3722:-331.982,-28.7099,0	0/1:81:38,43:38:1364:43:1532:-113.79,0,-98.6773	0/1:147:81,65:81:2900:65:2321:-164.838,0,-216.926	1/1:190:0,190:0:0:190:6744:-607.026,-57.1957,0	1/1:214:1,213:1:36:213:7556:-676.483,-60.8221,0	1/1:139:1,138:1:32:138:4941:-441.639,-38.6439,0	1/1:162:0,162:0:0:162:5798:-521.913,-48.7669,0	0/1:276:134,142:134:4796:142:5077:-373.988,0,-348.712	1/1:9:0,9:0:0:9:324:-29.5059,-2.70927,0	1/1:205:0,205:0:0:205:7341:-660.737,-61.7112,0	1/1:90:0,90:0:0:90:3229:-290.83,-27.0927,0	0/1:20:13,7:13:464:7:252:-17.0084,0,-36.0769	1/1:189:0,189:0:0:189:6750:-607.572,-56.8947,0	1/1:80:0,80:0:0:80:2855:-257.186,-24.0824,0	0/1:13:4,9:4:144:9:316:-24.8655,0,-9.40023	0/1:24:12,12:12:428:12:432:-31.9965,0,-31.6341	1/1:117:0,117:0:0:117:4184:-376.74,-35.2205,0	0/1:142:65,77:65:2324:77:2756:-205.535,0,-166.674	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	1/1:192:0,192:0:0:192:6813:-613.24,-57.7978,0	0/1:262:114,147:114:4077:147:5268:-395.327,0,-288.186	1/1:75:4,71:4:144:71:2548:-216.257,-9.26363,0	0/1:86:37,49:37:1320:49:1744:-131.356,0,-93.2134	0/1:218:94,124:94:3376:124:4436:-333.787,0,-238.112	0/1:169:107,62:107:3848:62:2197:-147.12,0,-295.64	0/1:29:15,14:15:540:14:504:-36.9682,0,-40.2067	0/1:91:43,48:43:1540:48:1724:-128.052,0,-111.499	0/1:90:49,41:49:1756:41:1468:-105.323,0,-131.231	1/1:33:0,33:0:0:33:1184:-106.868,-9.93399,0	0/1:167:65,102:65:2324:102:3645:-277.981,0,-159.148	0/1:55:26,29:26:936:29:1036:-76.9973,0,-68.0028	0/1:228:119,109:119:4249:109:3897:-282.288,0,-313.94	1/1:168:0,168:0:0:168:5986:-538.846,-50.573,0	0/1:115:64,51:64:2292:51:1813:-128.831,0,-171.923	0/1:88:41,47:41:1476:47:1684:-125.356,0,-106.646	0/1:27:9,18:9:324:18:637:-49.5306,0,-21.378	1/1:153:0,153:0:0:153:5500:-495.124,-46.0576,0	1/1:172:3,169:3:104:169:6045:-534.446,-42.0744,0	1/1:340:0,340:0:0:340:12157:-1093.98,-102.35,0	1/1:115:0,114:0:0:114:4069:-366.036,-34.3174,0	1/1:43:0,43:0:0:43:1540:-138.893,-12.9443,0	1/1:86:0,86:0:0:86:3084:-277.788,-25.8886,0	1/1:157:0,157:0:0:157:5637:-507.449,-47.2617,0	1/1:59:0,59:0:0:59:2088:-188.188,-17.7608,0	0/1:106:50,56:50:1780:56:2004:-148.724,0,-128.574	1/1:100:0,100:0:0:100:3592:-323.486,-30.103,0	1/1:54:0,54:0:0:54:1944:-175.236,-16.2556,0	0/1:101:51,50:51:1828:50:1796:-131.518,0,-134.397	0/1:80:57,23:57:2048:23:828:-50.7617,0,-160.509	1/1:122:0,122:0:0:122:4346:-391.313,-36.7257,0	1/1:98:1,97:1:36:97:3479:-309.723,-25.9027,0
chr12	9639520	.	A	G	650339	PASS	AB=0.783561;ABP=10241.6;AC=149;AF=0.792553;AN=188;AO=25457;CIGAR=1X;DP=28696;DPB=28696;DPRA=0;EPP=55238.8;EPPR=6977.79;GTI=8;LEN=1;MEANALT=1.17021;MQM=59.9785;MQMR=59.9907;NS=94;NUMALT=1;ODDS=1.53971;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=893334;QR=114664;RO=3220;RPL=6401;RPP=13663.7;RPPR=1536.57;RPR=19056;RUN=1;SAF=6400;SAP=13668;SAR=19057;SRF=856;SRP=1536.57;SRR=2364;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:43:5,38:5:180:38:1323:-106.422,0,-3.60777	1/1:320:0,319:0:0:319:11164:-1004.34,-96.0286,0	0/1:183:38,145:38:1342:145:5089:-403.071,0,-65.9901	1/1:752:2,750:2:68:750:26368:-2365.97,-219.917,0	0/1:77:16,61:16:576:61:2179:-173.196,0,-28.9957	0/1:69:14,55:14:504:55:1916:-151.942,0,-24.927	1/1:358:0,358:0:0:358:12704:-1143.11,-107.769,0	0/1:224:41,183:41:1468:183:6376:-506.509,0,-64.9854	1/1:148:0,148:0:0:148:5189:-465.966,-44.5524,0	1/1:570:0,569:0:0:569:20084:-1806.74,-171.286,0	1/1:296:1,294:1:36:294:10297:-923.128,-85.5205,0	1/1:131:1,130:1:32:130:4524:-404.13,-36.2356,0	1/1:149:1,148:1:36:148:5197:-464.267,-41.2552,0	1/1:218:1,217:1:36:217:7544:-675.417,-62.0263,0	1/1:215:0,215:0:0:215:7557:-680.186,-64.7215,0	1/1:113:0,113:0:0:113:3935:-354.275,-34.0164,0	1/1:305:1,304:1:36:304:10648:-954.652,-88.2159,0	1/1:238:0,238:0:0:238:8319:-748.734,-71.6451,0	1/1:144:0,144:0:0:144:5071:-456.541,-43.3483,0	0/1:797:189,606:189:6772:606:21368:-1682.93,0,-369.874	0/1:396:96,300:96:3415:300:10511:-826.713,0,-188.357	0/1:396:86,310:86:3058:310:10873:-858.398,0,-156.241	1/1:171:0,170:0:0:170:6009:-540.603,-51.1751,0	1/1:162:10,152:10:356:152:5344:-448.716,-16.3856,0	1/1:86:1,85:1:36:85:3003:-266.904,-22.2903,0	0/1:1073:221,851:221:7846:851:29908:-2367.8,0,-383.109	1/1:325:3,322:3:108:322:11319:-1008.5,-87.7596,0	1/1:69:0,69:0:0:69:2386:-214.995,-20.7711,0	0/1:903:175,728:175:6218:728:25393:-2012.9,0,-287.88	0/1:399:62,336:62:2193:336:11796:-941.33,0,-77.4645	1/1:305:0,304:0:0:304:10636:-956.815,-91.5131,0	0/1:15:5,10:5:180:10:347:-27.0473,0,-12.0366	0/1:61:10,51:10:360:51:1785:-142.568,0,-14.3815	1/1:16:0,16:0:0:16:568:-51.4519,-4.81648,0	1/1:15:1,14:1:36:14:500:-41.7379,-0.917175,0	0/1:36:6,30:6:216:30:1058:-84.6809,0,-8.95343	0/1:1046:243,803:243:8636:803:27824:-2188.57,0,-462.361	0/1:269:43,226:43:1535:226:7983:-637.514,0,-57.4653	1/1:199:0,199:0:0:199:6917:-622.61,-59.905,0	0/1:9:2,7:2:72:7:248:-19.9549,0,-4.12745	1/1:218:0,218:0:0:218:7613:-685.215,-65.6245,0	1/1:124:0,123:0:0:123:4316:-388.261,-37.0267,0	1/1:204:0,204:0:0:204:7187:-646.895,-61.4101,0	1/1:400:1,399:1:36:399:13994:-1255.66,-116.814,0	0/1:326:72,253:72:2571:253:8858:-699.03,0,-133.445	0/1:337:57,280:57:2035:280:9735:-774.673,0,-81.9745	1/1:153:0,153:0:0:153:5357:-482.267,-46.0576,0	1/1:476:3,473:3:108:473:16652:-1488.18,-133.215,0	1/1:409:1,408:1:36:408:14431:-1294.96,-119.523,0	1/1:670:2,668:2:72:668:23584:-2115.11,-194.853,0	0/1:724:138,586:138:4886:586:20393:-1616.98,0,-221.949	1/1:41:0,41:0:0:41:1450:-130.794,-12.3422,0	1/1:342:0,339:0:0:339:11906:-1071.05,-102.049,0	1/1:166:0,166:0:0:166:5754:-517.986,-49.971,0	1/1:81:6,75:6:216:75:2670:-220.753,-4.59292,0	1/1:102:0,102:0:0:102:3582:-322.588,-30.7051,0	1/1:60:0,60:0:0:60:2127:-191.698,-18.0618,0	0/1:38:14,24:14:496:24:851:-65.4703,0,-33.5351	0/1:131:31,100:31:1108:100:3514:-277.028,0,-60.5961	1/1:176:1,175:1:36:175:6132:-548.387,-49.383,0	0/1:583:137,445:137:4892:445:15527:-1221.63,0,-264.874	1/1:13:0,13:0:0:13:447:-40.5577,-3.91339,0	1/1:461:4,456:4:136:456:15974:-1424.8,-126.254,0	0/1:682:128,553:128:4565:553:19508:-1549.81,0,-205.8	1/1:170:1,168:1:36:168:5818:-520.146,-47.6356,0	0/1:217:30,187:30:1062:187:6662:-534.337,0,-30.5665	0/1:962:218,743:218:7777:743:26151:-2062.83,0,-410.313	0/1:572:158,414:158:5594:414:14594:-1141.03,0,-331.4	0/1:122:32,90:32:1152:90:3184:-250.058,0,-67.2645	0/1:147:31,116:31:1095:116:4090:-324.034,0,-54.6077	0/1:472:95,377:95:3382:377:13163:-1042.42,0,-162.51	1/1:110:0,110:0:0:110:3866:-348.135,-33.1133,0	0/1:197:50,147:50:1787:147:5185:-407.489,0,-101.809	0/1:301:57,244:57:2044:244:8590:-682.457,0,-93.6071	0/1:441:77,364:77:2751:364:12686:-1008.83,0,-115.077	1/1:673:1,672:1:36:672:23685:-2127.46,-198.995,0	0/1:296:64,232:64:2288:232:8131:-642.708,0,-117.077	0/1:825:191,634:191:6782:634:22357:-1763.23,0,-362.104	0/1:39:7,32:7:252:32:1125:-89.8159,0,-11.2888	1/1:234:5,229:5:180:229:8030:-706.178,-53.889,0	1/1:253:0,253:0:0:253:8894:-800.438,-76.1606,0	1/1:784:1,783:1:36:783:27584:-2478.21,-232.409,0	1/1:343:2,341:2:72:341:11915:-1065.4,-96.4166,0	1/1:120:0,120:0:0:120:4200:-378.189,-36.1236,0	1/1:255:0,255:0:0:255:8867:-798.04,-76.7627,0	1/1:579:2,577:2:68:577:20157:-1807.24,-167.839,0	1/1:66:2,64:2:72:64:2269:-197.634,-13.0313,0	0/1:170:42,128:42:1499:128:4408:-345.724,0,-84.0287	1/1:136:0,136:0:0:136:4776:-429.995,-40.9401,0	1/1:157:0,157:0:0:157:5514:-496.393,-47.2617,0	0/1:423:100,323:100:3558:323:11287:-888.392,0,-193.093	0/1:659:184,475:184:6561:475:16772:-1310.78,0,-392.194	1/1:362:0,362:0:0:362:12758:-1148.07,-108.973,0	1/1:393:1,392:1:3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chr12	9639532	.	C	T	76270	PASS	AB=0.432773;ABP=435.405;AC=45;AF=0.239362;AN=188;AO=4794;CIGAR=1X;DP=21430;DPB=21430;DPRA=1.40806;EPP=10404.4;EPPR=35993;GTI=1;LEN=1;MEANALT=1.21053;MQM=59.9186;MQMR=59.9892;NS=94;NUMALT=1;ODDS=4.19094;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=170946;QR=594010;RO=16614;RPL=0;RPP=10413;RPPR=36010.4;RPR=4794;RUN=1;SAF=1;SAP=10404.4;SAR=4793;SRF=2;SRP=36062.5;SRR=16612;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:45:18,27:18:639:27:945:-71.8159,0,-44.2919	0/0:320:320,0:320:11472:0:0:0,-96.3296,-1032.35	0/0:185:185,0:185:6616:0:0:0,-55.6905,-595.518	0/0:425:417,7:417:14968:7:248:0,-105.332,-1324.18	0/0:77:74,3:74:2645:3:108:0,-13.1041,-228.22	0/0:68:68,0:68:2425:0:0:0,-20.47,-218.504	0/1:267:127,140:127:4556:140:4995:-369.313,0,-329.83	0/0:232:232,0:232:8275:0:0:0,-69.839,-744.761	0/1:142:70,71:70:2488:71:2513:-183.785,0,-181.535	0/0:434:432,1:432:15418:1:36:0,-127.108,-1383.73	0/0:223:223,0:223:7975:0:0:0,-67.1297,-717.773	0/0:132:132,0:132:4704:0:0:0,-39.736,-423.514	0/0:149:149,0:149:5314:0:0:0,-44.8535,-478.287	0/0:220:220,0:220:7858:0:0:0,-66.2266,-707.248	0/1:109:60,49:60:2156:49:1741:-124.161,0,-161.495	0/1:114:56,58:56:2008:58:2079:-152.834,0,-146.676	0/0:306:306,0:306:10923:0:0:0,-92.1152,-982.97	0/1:231:101,130:101:3587:130:4638:-348.046,0,-253.498	0/1:140:68,72:68:2423:72:2572:-189.586,0,-176.181	0/1:514:316,197:316:11303:197:7036:-478.512,0,-862.362	0/1:397:270,127:270:9661:127:4518:-287.276,0,-749.931	0/1:275:115,160:115:4113:160:5711:-431.11,0,-287.57	0/1:71:37,34:37:1328:34:1197:-86.6603,0,-98.4491	0/1:163:144,19:144:5149:19:684:-12.8224,0,-414.482	0/0:86:86,0:86:3084:0:0:0,-25.8886,-277.788	0/1:820:499,321:499:17883:321:11496:-787.658,0,-1362.22	0/1:334:141,191:141:5064:191:6773:-509.328,0,-355.601	0/0:69:69,0:69:2472:0:0:0,-20.7711,-222.734	0/1:438:257,181:257:9191:181:6420:-446.04,0,-695.297	0/1:400:208,192:208:7436:192:6845:-495.696,0,-548.872	0/0:218:215,0:215:7656:0:0:0,-64.7214,-688.714	0/1:15:9,6:9:320:6:216:-15.2751,0,-24.6269	0/1:61:51,10:51:1828:10:360:-14.3815,0,-146.438	0/0:18:18,0:18:639:0:0:0,-5.41854,-57.8382	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/1:33:20,13:20:720:13:464:-32.1635,0,-55.1948	0/0:494:494,0:494:17673:0:0:0,-148.709,-1590.14	0/0:269:269,0:269:9641:0:0:0,-80.9771,-867.638	0/1:193:102,91:102:3652:91:3224:-232.283,0,-270.785	0/1:8:1,7:1:36:7:243:-19.7992,0,-1.19003	0/1:216:102,114:102:3639:114:4052:-299.845,0,-262.693	0/0:126:126,0:126:4492:0:0:0,-37.9298,-404.449	0/1:200:108,92:108:3859:92:3300:-236.956,0,-287.299	0/1:302:179,123:179:6402:123:4406:-305.801,0,-485.357	0/0:195:194,0:194:6927:0:0:0,-58.3998,-622.647	0/1:149:95,54:95:3404:54:1936:-129.663,0,-261.721	0/1:150:71,79:71:2539:79:2801:-207.066,0,-183.606	0/1:269:127,141:127:4528:141:5021:-370.998,0,-326.651	0/0:252:249,1:249:8889:1:36:0,-72.019,-796.375	0/0:513:510,1:510:18291:1:36:0,-150.588,-1642.17	0/0:381:381,0:381:13636:0:0:0,-114.692,-1227.02	0/0:32:32,0:32:1148:0:0:0,-9.63296,-103.63	0/1:338:202,136:202:7222:136:4863:-336.075,0,-548.286	0/1:79:49,30:49:1752:30:1072:-73.0111,0,-134.183	0/0:83:83,0:83:2962:0:0:0,-24.9855,-266.812	0/0:100:99,1:99:3533:1:36:0,-26.5047,-314.572	0/0:19:19,0:19:684:0:0:0,-5.71957,-61.8903	0/0:28:28,0:28:1008:0:0:0,-8.42884,-91.0364	0/1:107:79,28:79:2840:28:1004:-58.4657,0,-223.627	0/1:174:92,82:92:3296:82:2948:-213.174,0,-244.48	0/0:383:382,1:382:13691:1:36:0,-111.696,-1228.37	0/0:11:11,0:11:384:0:0:0,-3.31133,-34.8947	0/1:188:142,46:142:5060:46:1640:-91.2794,0,-398.951	0/0:485:476,8:476:16997:8:280:0,-120.482,-1503.83	0/1:172:83,89:83:2956:89:3204:-236.804,0,-214.495	0/0:90:90,0:90:3228:0:0:0,-27.0927,-290.742	0/1:708:420,288:420:15044:288:10292:-712.963,0,-1140.18	0/1:376:178,196:178:6377:196:6998:-516.939,0,-461.072	0/0:122:122,0:122:4362:0:0:0,-36.7257,-392.753	0/0:145:145,0:145:5200:0:0:0,-43.6493,-468.138	0/0:380:380,0:380:13561:0:0:0,-114.391,-1220.28	0/1:81:43,38:43:1548:38:1364:-98.6773,0,-115.23	0/0:194:193,1:193:6879:1:36:0,-54.8015,-615.581	0/1:300:146,154:146:5223:154:5495:-404.311,0,-379.899	0/0:439:439,0:439:15665:0:0:0,-132.152,-1409.55	0/0:376:375,0:375:13391:0:0:0,-112.886,-1204.77	0/1:293:179,114:179:6420:114:4073:-278.532,0,-489.684	0/1:829:509,318:509:18145:318:11370:-773.853,0,-1383.34	0/1:40:26,14:26:932:14:504:-33.6569,0,-72.1577	0/0:230:230,0:230:8247:0:0:0,-69.2369,-742.238	0/0:256:255,1:255:9097:1:36:0,-73.4654,-815.107	0/0:360:359,1:359:12866:1:36:0,-104.773,-1154.15	0/0:214:213,0:213:7615:0:0:0,-64.1194,-685.028	0/0:63:63,0:63:2260:0:0:0,-18.9649,-203.663	0/1:191:110,81:110:3921:81:2864:-200.501,0,-295.586	0/0:348:348,0:348:12448:0:0:0,-104.758,-1120.15	0/1:67:34,33:34:1220:33:1184:-86.6993,0,-89.9378	0/1:170:108,62:108:3839:62:2198:-146.91,0,-294.533	0/0:137:137,0:137:4878:0:0:0,-41.2411,-439.166	0/0:156:156,0:156:5576:0:0:0,-46.9607,-501.964	0/1:426:266,160:266:9492:160:5707:-385.502,0,-725.997	0/1:420:221,199:221:7895:199:7020:-505.434,0,-584.142	0/0:174:173,1:173:6176:1:36:0,-48.7809,-552.339	0/0:183:183,0:183:6527:0:0:0,-55.0885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chr12	9642422	.	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chr12	10643064	.	G	C	335391	PASS	AB=0.516929;ABP=18.6704;AC=147;AF=0.781915;AN=188;AO=12357;CIGAR=1X;DP=15421;DPB=15421;DPRA=0;EPP=26801.2;EPPR=6623.83;GTI=1;LEN=1;MEANALT=1.11702;MQM=59.9073;MQMR=59.9524;NS=94;NUMALT=1;ODDS=0.505875;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=436524;QR=106842;RO=3049;RPL=6624;RPP=142.518;RPPR=30.0914;RPR=5733;RUN=1;SAF=6622;SAP=141.268;SAR=5735;SRF=1622;SRP=30.0914;SRR=1427;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:92:41,51:41:1412:51:1795:-134.137,0,-99.6753	1/1:266:0,266:0:0:266:9387:-844.787,-80.074,0	0/1:205:87,118:87:3046:118:4149:-311.879,0,-212.656	1/1:266:0,266:0:0:266:9434:-849.025,-80.074,0	0/1:99:51,48:51:1801:48:1703:-123.753,0,-132.568	0/1:59:28,31:28:1008:31:1102:-81.7288,0,-73.2756	1/1:292:2,290:2:72:290:10233:-914.059,-81.064,0	0/1:252:112,138:112:3924:138:4904:-365.896,0,-277.733	1/1:160:1,159:1:36:159:5649:-504.92,-44.5665,0	1/1:170:0,170:0:0:170:6036:-543.346,-51.1751,0	1/1:163:0,163:0:0:163:5744:-517.078,-49.0679,0	1/1:163:0,163:0:0:163:5731:-515.914,-49.0679,0	1/1:181:0,181:0:0:181:6357:-572.224,-54.4864,0	1/1:202:0,202:0:0:202:7042:-633.844,-60.8081,0	1/1:138:0,138:0:0:138:4897:-440.839,-41.5421,0	1/1:151:0,151:0:0:151:5258:-473.232,-45.4555,0	1/1:174:0,174:0:0:174:6135:-552.236,-52.3792,0	1/1:166:0,166:0:0:166:5796:-521.745,-49.971,0	1/1:98:0,98:0:0:98:3499:-315.12,-29.5009,0	0/1:374:168,205:168:5859:205:7300:-544.409,0,-414.784	0/1:346:155,190:155:5412:190:6687:-497.682,0,-382.994	0/1:77:56,21:56:1919:21:743:-43.9964,0,-149.8	1/1:132:0,132:0:0:132:4645:-418.211,-39.736,0	1/1:192:8,184:8:288:184:6538:-562.217,-31.5304,0	1/1:144:0,142:0:0:142:4983:-448.266,-42.7463,0	0/1:404:198,205:198:6892:205:7275:-533.128,0,-498.682	1/1:386:0,384:0:0:384:13673:-1229.98,-115.596,0	1/1:84:0,84:0:0:84:2927:-262.031,-25.2865,0	0/1:384:192,191:192:6729:191:6760:-492.822,0,-490.04	0/1:150:74,76:74:2623:76:2713:-198.481,0,-191.164	1/1:192:0,192:0:0:192:6807:-612.686,-57.7978,0	0/1:5:2,3:2:72:3:108:-8.57002,0,-5.33157	0/1:24:12,12:12:428:12:432:-31.9965,0,-31.6341	1/1:10:0,10:0:0:10:351:-31.9267,-3.0103,0	0/1:17:12,5:12:413:5:176:-11.0675,0,-32.3803	0/1:23:12,11:12:415:11:379:-27.5169,0,-30.7566	0/1:393:189,202:189:6496:202:7107:-521.642,0,-466.59	0/1:116:52,64:52:1821:64:2268:-169.463,0,-129.25	1/1:159:0,159:0:0:159:5484:-493.694,-47.8638,0	0/1:5:3,2:3:108:2:63:-4.478,0,-8.57002	1/1:238:0,238:0:0:238:8470:-762.3,-71.6451,0	1/1:92:0,91:0:0:91:3204:-288.225,-27.3937,0	1/1:175:0,175:0:0:175:6190:-557.096,-52.6803,0	1/1:152:0,152:0:0:152:5337:-480.472,-45.7566,0	0/1:128:64,64:64:2257:64:2234:-162.79,0,-164.86	0/1:146:64,82:64:2225:82:2929:-219.894,0,-156.561	1/1:181:0,181:0:0:181:6411:-577.079,-54.4864,0	1/1:288:0,288:0:0:288:10203:-918.201,-86.6966,0	1/1:144:0,144:0:0:144:5120:-460.942,-43.3483,0	1/1:215:0,215:0:0:215:7577:-681.958,-64.7215,0	0/1:226:111,115:111:3895:115:4085:-299.794,0,-282.711	1/1:22:0,22:0:0:22:777:-70.2504,-6.62266,0	1/1:203:0,203:0:0:203:7208:-648.761,-61.1091,0	1/1:49:0,49:0:0:49:1745:-157.276,-14.7505,0	0/1:18:7,11:7:252:11:383:-29.3814,0,-17.6104	1/1:249:0,248:0:0:248:8810:-792.434,-74.6554,0	1/1:87:0,87:0:0:87:3095:-278.771,-26.1896,0	0/1:30:10,20:10:360:20:712:-55.3758,0,-23.7134	0/1:23:10,13:10:360:13:468:-35.536,0,-25.8206	1/1:91:0,91:0:0:91:3249:-291.845,-27.3937,0	0/1:215:113,102:113:3937:102:3573:-257.026,0,-289.8	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:178:1,177:1:27:177:6265:-561.191,-50.8836,0	0/1:234:100,134:100:3555:134:4747:-356.924,0,-249.714	1/1:150:0,150:0:0:150:5303:-477.373,-45.1545,0	0/1:147:77,70:77:2707:70:2499:-180.911,0,-199.62	0/1:216:101,115:101:3568:115:4056:-300.205,0,-256.305	0/1:91:52,39:52:1847:39:1369:-96.1132,0,-139.114	0/1:69:34,35:34:1191:35:1240:-91.1334,0,-86.7232	0/1:98:52,46:52:1860:46:1634:-117.846,0,-138.179	0/1:190:79,111:79:2762:111:3898:-293.797,0,-191.625	1/1:42:0,42:0:0:42:1495:-134.844,-12.6433,0	0/1:104:43,61:43:1520:61:2163:-163.628,0,-105.785	0/1:94:38,56:38:1356:56:1951:-147.559,0,-94.0437	0/1:383:190,193:190:6706:193:6827:-499.083,0,-488.299	1/1:220:0,220:0:0:220:7836:-705.268,-66.2266,0	0/1:157:82,75:82:2885:75:2657:-192.068,0,-212.465	0/1:179:88,91:88:3066:91:3242:-238.073,0,-222.281	0/1:11:5,6:5:180:6:207:-15.6556,0,-13.2407	1/1:235:2,233:2:72:233:8224:-733.321,-63.9053,0	1/1:172:2,169:2:68:169:6012:-534.714,-45.3716,0	1/1:428:2,426:2:72:426:15081:-1350.12,-122.004,0	1/1:200:0,200:0:0:200:7021:-631.957,-60.206,0	1/1:163:0,163:0:0:163:5803:-522.387,-49.0679,0	1/1:197:0,197:0:0:197:6915:-622.405,-59.3029,0	1/1:275:0,275:0:0:275:9680:-871.161,-82.7833,0	1/1:80:0,80:0:0:80:2796:-251.879,-24.0824,0	0/1:176:89,87:89:3073:87:3084:-224.809,0,-223.818	1/1:160:0,160:0:0:160:5596:-503.759,-48.1648,0	1/1:110:0,110:0:0:110:3818:-343.813,-33.1133,0	0/1:190:85,105:85:2983:105:3650:-271.278,0,-211.503	0/1:141:93,48:93:3284:48:1689:-109.847,0,-253.336	1/1:170:0,170:0:0:170:5992:-539.381,-51.1751,0	1/1:262:0,262:0:0:262:9256:-833.016,-78.8699,0
chr12	10643070	.	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chr12	12936596	.	AA	TA	23466.2	PASS	AB=0.369475;ABP=645.832;AC=40;AF=0.212766;AN=188;AO=1618;CIGAR=1X1M;DP=10834;DPB=10834;DPRA=1.02628;EPP=3490.44;EPPR=19997.9;GTI=6;LEN=1;MEANALT=1.06522;MQM=59.9827;MQMR=59.9866;NS=94;NUMALT=1;ODDS=0.651876;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58010;QR=327487;RO=9208;RPL=1616;RPP=3499.1;RPPR=19997.9;RPR=2;RUN=1;SAF=1617;SAP=3507.77;SAR=1;SRF=9208;SRP=19997.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:52,16:52:1854:16:576:-31.7049,0,-146.669	0/0:90:90,0:90:3189:0:0:0,-27.0927,-287.233	0/1:112:67,45:67:2363:45:1603:-110.844,0,-179.211	0/0:235:235,0:235:8367:0:0:0,-70.742,-753.036	0/1:70:39,30:39:1347:30:1076:-76.167,0,-100.538	0/1:44:28,12:28:1006:12:428:-26.4586,0,-78.4553	0/0:158:158,0:158:5636:0:0:0,-47.5627,-507.361	0/1:139:80,59:80:2830:59:2124:-149.585,0,-213.094	0/0:157:157,0:157:5539:0:0:0,-47.2617,-498.638	0/0:85:85,0:85:3009:0:0:0,-25.5875,-271.04	0/0:92:92,0:92:3291:0:0:0,-27.6948,-296.409	0/0:122:122,0:122:4330:0:0:0,-36.7257,-389.874	0/0:105:105,0:105:3740:0:0:0,-31.6081,-336.802	0/0:71:71,0:71:2511:0:0:0,-21.3731,-226.241	0/0:62:62,0:62:2176:0:0:0,-18.6639,-196.103	0/0:55:55,0:55:1966:0:0:0,-16.5566,-177.215	0/0:48:48,0:48:1717:0:0:0,-14.4494,-154.814	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6761	0/0:33:33,0:33:1180:0:0:0,-9.93399,-106.508	0/1:190:112,78:112:4009:78:2786:-193.785,0,-303.802	0/1:174:129,45:129:4564:45:1616:-93.3508,0,-358.547	0/1:106:57,49:57:2027:49:1740:-124.973,0,-150.792	0/0:291:288,3:288:10223:3:93:0,-78.923,-911.324	0/1:104:91,13:91:3257:13:468:-11.1525,0,-262.043	0/0:210:210,0:210:7452:0:0:0,-63.2163,-670.726	0/1:266:157,109:157:5525:109:3911:-272.052,0,-417.304	0/0:334:333,0:333:11910:0:0:0,-100.243,-1071.39	0/0:30:30,0:30:1067:0:0:0,-9.0309,-96.3409	0/1:248:164,84:164:5839:84:3016:-197.015,0,-450.968	0/1:77:36,41:36:1296:41:1476:-109.957,0,-93.7646	0/0:198:195,3:195:6948:3:108:0,-49.5288,-615.311	0/1:16:11,5:11:384:5:180:-11.7356,0,-30.0773	0/1:23:19,4:19:674:4:144:-6.38993,0,-54.0633	0/0:12:12,0:12:421:0:0:0,-3.61236,-38.2235	0/1:19:14,5:14:500:5:176:-10.4654,0,-39.608	0/1:26:20,6:20:716:6:216:-11.9637,0,-56.9411	0/1:206:105,101:105:3765:101:3617:-263.722,0,-277.036	0/1:112:75,37:75:2667:37:1332:-86.467,0,-206.56	0/0:76:76,0:76:2712:0:0:0,-22.8783,-244.322	0/1:11:4,7:4:144:7:248:-19.3529,0,-10.0023	0/0:202:201,1:201:7148:1:36:0,-57.2098,-639.781	0/0:42:42,0:42:1499:0:0:0,-12.6433,-135.204	0/0:252:251,0:251:8974:0:0:0,-75.5585,-807.428	0/0:85:85,0:85:3030:0:0:0,-25.5875,-272.929	0/1:58:45,13:45:1608:13:459:-24.1844,0,-127.55	0/1:137:109,28:109:3903:28:1004:-49.4348,0,-310.222	0/0:163:162,1:162:5706:1:36:0,-45.4696,-510.063	0/0:224:224,0:224:7942:0:0:0,-67.4307,-714.58	0/0:141:141,0:141:5008:0:0:0,-42.4452,-450.867	0/0:129:128,1:128:4566:1:36:0,-35.2346,-407.506	0/1:151:95,56:95:3395:56:1997:-134.546,0,-260.309	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9146	0/0:160:160,0:160:5719:0:0:0,-48.1648,-514.827	0/0:120:120,0:120:4272:0:0:0,-36.1236,-384.628	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/0:191:191,0:191:6838:0:0:0,-57.4967,-614.998	0/0:81:81,0:81:2868:0:0:0,-24.3834,-258.354	0/0:45:41,4:41:1472:4:144:0,-0.232732,-119.463	0/1:21:16,5:16:576:5:180:-10.2304,0,-45.8534	0/0:139:139,0:139:4949:0:0:0,-41.8432,-445.56	0/1:124:62,62:62:2199:62:2228:-163.456,0,-160.845	0/0:20:20,0:20:699:0:0:0,-6.0206,-63.2316	0/0:250:250,0:250:8925:0:0:0,-75.2575,-803.233	0/1:206:133,73:133:4724:73:2620:-174.035,0,-363.282	0/0:80:80,0:80:2817:0:0:0,-24.0824,-253.766	0/1:154:103,51:103:3649:51:1836:-119.162,0,-282.255	0/1:211:128,83:128:4539:83:2976:-204.555,0,-345.16	0/1:105:55,50:55:1967:50:1796:-130.314,0,-145.696	0/1:74:38,36:38:1328:36:1296:-94.6677,0,-97.5401	0/1:85:39,46:39:1387:46:1648:-123.021,0,-99.5405	0/1:62:35,27:35:1245:27:972:-69.134,0,-93.6899	0/0:50:50,0:50:1759:0:0:0,-15.0515,-158.59	0/1:124:95,29:95:3407:29:1044:-56.9471,0,-269.515	0/1:94:75,19:75:2653:19:684:-33.5935,0,-210.718	0/1:176:128,48:128:4545:48:1728:-102.824,0,-356.235	0/0:114:114,0:114:4070:0:0:0,-34.3174,-366.487	0/1:203:141,62:141:4977:62:2208:-137.874,0,-386.97	0/1:80:50,30:50:1790:30:1080:-73.4171,0,-137.3	0/1:15:9,6:9:313:6:216:-15.2751,0,-23.9896	0/0:110:110,0:110:3870:0:0:0,-33.1133,-348.484	0/0:152:152,0:152:5377:0:0:0,-45.7566,-484.063	0/0:293:293,0:293:10429:0:0:0,-88.2018,-938.529	0/0:68:68,0:68:2400:0:0:0,-20.47,-216.227	0/0:94:94,0:94:3346:0:0:0,-28.2968,-301.358	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/0:142:142,0:142:5038:0:0:0,-42.7463,-453.566	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.3148	0/0:86:86,0:86:3073:0:0:0,-25.8886,-276.798	0/0:81:81,0:81:2904:0:0:0,-24.3834,-261.595	0/0:74:74,0:74:2647:0:0:0,-22.2762,-238.476	0/1:134:76,58:76:2717:58:2084:-147.492,0,-204.435	0/1:109:34,74:34:1189:74:2660:-206.774,0,-74.4403	0/0:194:194,0:194:6932:0:0:0,-58.3998,-623.946	0/0:102:102,0:102:3608:0:0:0,-30.7051,-324.924
chr12	13530996	.	AC	GT	7788.41	PASS	AB=0.368495;ABP=537.006;AC=88;AF=0.468085;AN=188;AO=1320;CIGAR=2X;DP=3676;DPB=3676;DPRA=9.87097;EPP=2869.35;EPPR=5086.43;GTI=20;LEN=2;MEANALT=1.08602;MQM=27.1061;MQMR=32.3667;NS=94;NUMALT=1;ODDS=0.448733;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46521;QR=82438;RO=2345;RPL=0;RPP=2869.35;RPPR=5086.43;RPR=1320;RUN=1;SAF=0;SAP=2869.35;SAR=1320;SRF=0;SRP=5095.11;SRR=2345;TYPE=mnp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:25:13,12:13:448:12:430:-21.9345,0,-29.0975	0/1:22:6,16:6:203:16:572:-32.403,0,-10.0287	0/1:81:42,38:42:1492:38:1353:-65.869,0,-92.8187	0/1:85:57,28:57:1994:28:990:-43.0148,0,-140.277	0/1:24:13,11:13:464:11:392:-16.4837,0,-22.8157	0/0:17:16,1:16:572:1:36:0,-2.46891,-43.6541	0/1:24:15,9:15:538:9:317:-15.0392,0,-27.8977	0/1:28:20,8:20:718:8:288:-11.0658,0,-43.8447	0/1:25:21,4:21:754:4:142:-2.40313,0,-52.959	0/0:26:24,2:24:835:2:72:0,-2.628,-65.5131	0/1:19:9,10:9:310:10:332:-18.1872,0,-21.0518	0/1:38:30,8:30:1063:8:288:-7.88445,0,-70.9787	0/1:20:16,4:16:557:4:142:-4.07247,0,-39.2092	0/1:23:13,10:13:466:10:356:-17.1169,0,-28.6711	0/1:17:9,8:9:324:8:288:-14.8568,0,-22.6608	0/1:20:14,6:14:478:6:216:-8.29455,0,-28.6825	0/1:16:11,5:11:385:5:180:-7.77005,0,-26.0548	0/1:12:7,5:7:241:5:180:-8.97417,0,-15.8369	0/0:4:4,0:4:144:0:0:0,-1.20412,-11.8561	0/1:65:39,26:39:1396:26:908:-42.9462,0,-87.448	0/1:45:34,11:34:1211:11:374:-12.3638,0,-71.1486	0/1:60:40,20:40:1425:20:704:-30.8935,0,-81.5075	0/1:89:67,21:67:2379:21:749:-25.1334,0,-138.11	0/1:27:20,7:20:689:7:250:-8.87821,0,-44.2667	0/1:37:9,28:9:324:28:1001:-52.5623,0,-12.4894	0/1:121:54,67:54:1923:67:2394:-124.855,0,-121.601	0/1:45:33,12:33:1171:12:422:-15.1149,0,-72.4755	0/1:18:15,3:15:512:3:106:-1.97191,0,-33.2214	0/1:126:69,56:69:2446:56:1976:-95.0726,0,-101.183	0/1:36:25,11:25:887:11:385:-14.7885,0,-54.9436	0/1:38:20,18:20:702:18:637:-32.627,0,-47.4368	0/1:14:11,3:11:392:3:106:-2.41768,0,-20.5846	0/1:49:29,20:29:1012:20:720:-29.7041,0,-53.9194	0/1:104:69,35:69:2427:35:1222:-52.3511,0,-156.043	0/1:34:14,20:14:477:20:701:-36.8201,0,-26.815	0/1:77:60,17:60:2125:17:568:-16.808,0,-105.675	0/1:82:49,33:49:1717:33:1154:-53.1118,0,-121.315	0/1:38:26,12:26:926:12:391:-14.7064,0,-58.2343	0/1:13:9,4:9:322:4:144:-6.21056,0,-20.4118	0/1:34:23,11:23:794:11:372:-14.1719,0,-35.3604	0/1:45:25,20:25:883:20:716:-32.8382,0,-52.6512	0/1:20:14,6:14:502:6:207:-7.59297,0,-31.7832	0/1:68:50,18:50:1783:18:634:-21.0465,0,-113.31	0/1:16:11,5:11:385:5:178:-7.81108,0,-19.5476	0/1:25:18,7:18:634:7:242:-9.73884,0,-45.3863	0/1:34:20,14:20:693:14:502:-23.9203,0,-49.2487	0/1:44:35,9:35:1234:9:316:-9.14091,0,-85.7261	0/1:26:13,13:13:457:13:433:-23.8586,0,-19.3698	0/1:45:29,16:29:1036:16:569:-25.9965,0,-74.8264	0/1:40:29,11:29:1032:11:394:-14.7877,0,-70.9737	0/1:53:37,16:37:1317:16:576:-22.6772,0,-93.0398	0/1:55:23,32:23:815:32:1130:-59.108,0,-39.6919	0/1:40:25,15:25:870:15:538:-25.1409,0,-56.7447	0/1:29:12,17:12:432:17:612:-32.9066,0,-25.5376	0/1:36:31,5:31:1087:5:180:-1.74945,0,-73.699	0/1:69:41,28:41:1418:28:968:-43.7845,0,-86.5502	0/1:23:15,8:15:529:8:288:-13.0506,0,-35.9891	0/1:44:18,26:18:648:26:904:-48.3868,0,-39.263	0/1:29:20,9:20:706:9:319:-13.0627,0,-43.4997	0/1:27:19,8:19:635:8:288:-9.85552,0,-39.5439	0/1:46:35,11:35:1207:11:394:-13.3968,0,-73.2908	0/1:14:12,2:12:428:2:70:-1.02673,0,-18.3226	0/1:45:23,22:23:813:22:764:-39.7398,0,-40.4391	0/0:40:31,4:31:1057:4:144:0,-0.706711,-69.052	0/0:13:12,1:12:428:1:36:0,-1.26479,-30.212	0/1:42:36,6:36:1294:6:205:-1.6088,0,-70.3301	0/1:54:36,18:36:1280:18:630:-25.8001,0,-90.3361	0/1:65:40,24:40:1393:24:831:-38.4852,0,-63.0375	0/1:26:17,8:17:600:8:284:-9.03795,0,-37.7536	0/1:24:12,12:12:430:12:417:-22.2142,0,-23.9459	0/1:19:14,5:14:500:5:180:-6.36311,0,-32.8323	0/1:7:6,1:6:214:1:36:-0.628992,0,-16.4636	0/1:36:24,12:24:860:12:432:-18.5897,0,-58.3148	0/1:13:10,3:10:349:3:108:-3.74798,0,-22.8269	0/1:88:62,26:62:2155:26:920:-32.0666,0,-134.282	0/1:49:36,13:36:1226:13:436:-16.3921,0,-89.3891	0/1:37:16,21:16:576:21:738:-37.8575,0,-33.7934	0/0:21:18,2:18:618:2:70:0,-1.12413,-43.4192	0/1:25:20,5:20:700:5:180:-3.39312,0,-47.1813	0/1:62:37,25:37:1282:25:852:-39.7469,0,-74.7497	0/1:45:30,15:30:1020:15:522:-23.0807,0,-67.295	0/1:85:42,43:42:1488:43:1546:-80.4466,0,-100.058	0/1:13:5,8:5:178:8:286:-15.6361,0,-11.6328	0/1:19:15,4:15:538:4:144:-4.40438,0,-26.1231	0/1:22:14,8:14:461:8:288:-13.3516,0,-33.2	0/1:69:51,18:51:1750:18:639:-22.4927,0,-115.21	0/1:6:4,2:4:144:2:72:-3.3926,0,-7.96357	0/1:32:14,18:14:484:18:641:-34.0906,0,-29.4878	0/1:41:29,12:29:968:12:423:-17.0448,0,-65.9775	0/1:13:10,3:10:336:3:108:-3.50269,0,-20.486	0/1:53:22,31:22:775:31:1089:-53.5558,0,-43.2291	0/1:27:17,10:17:597:10:347:-15.8605,0,-35.4858	0/1:37:19,18:19:682:18:623:-32.2843,0,-46.9644	0/1:42:36,6:36:1268:6:214:-2.45305,0,-94.6032
chr12	13845957	.	G	C	42305	PASS	AB=0.46584;ABP=44.698;AC=31;AF=0.164894;AN=188;AO=1964;CIGAR=1X;DP=12746;DPB=12746;DPRA=1.05899;EPP=4267.78;EPPR=23359.4;GTI=1;LEN=1;MEANALT=1.125;MQM=59.9873;MQMR=59.9846;NS=94;NUMALT=1;ODDS=11.7217;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69417;QR=376641;RO=10772;RPL=931;RPP=14.5134;RPPR=2929.24;RPR=1033;RUN=1;SAF=931;SAP=14.5134;SAR=1033;SRF=3485;SRP=2916.96;SRR=7287;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:42:26,16:26:911:16:567:-38.7175,0,-69.6617	0/0:173:171,1:171:5978:1:36:0,-48.5387,-534.532	0/1:122:59,63:59:2060:63:2182:-159.916,0,-148.941	0/0:104:104,0:104:3620:0:0:0,-31.3071,-326.004	0/1:45:27,18:27:947:18:644:-44.7442,0,-71.9974	0/1:69:46,23:46:1636:23:824:-53.7122,0,-126.758	0/0:120:120,0:120:4233:0:0:0,-36.1236,-381.152	0/1:141:71,70:71:2493:70:2475:-180.557,0,-182.175	0/0:76:76,0:76:2639:0:0:0,-22.8783,-237.756	0/0:77:77,0:77:2688:0:0:0,-23.1793,-242.161	0/0:368:368,0:368:12757:0:0:0,-110.779,-1147.98	0/0:139:139,0:139:4864:0:0:0,-41.8432,-437.918	0/0:106:106,0:106:3687:0:0:0,-31.9092,-332.032	0/0:100:100,0:100:3523:0:0:0,-30.103,-317.281	0/0:96:96,0:96:3390:0:0:0,-28.8989,-305.315	0/0:83:83,0:83:2894:0:0:0,-24.9855,-260.695	0/0:103:103,0:103:3557:0:0:0,-31.0061,-320.339	0/0:100:100,0:100:3521:0:0:0,-30.103,-317.103	0/0:153:153,0:153:5383:0:0:0,-46.0576,-484.61	0/1:383:191,192:191:6691:192:6824:-498.939,0,-486.982	0/1:174:86,88:86:3042:88:3115:-228.2,0,-221.632	0/1:39:15,24:15:536:24:843:-64.4467,0,-36.8346	0/0:60:60,0:60:2134:0:0:0,-18.0618,-192.327	0/0:102:99,3:99:3481:3:108:0,-20.6299,-303.427	0/0:80:80,0:80:2794:0:0:0,-24.0824,-251.698	0/1:225:100,125:100:3539:125:4421:-330.334,0,-250.984	0/0:192:192,0:192:6783:0:0:0,-57.7978,-610.546	0/0:60:60,0:60:2112:0:0:0,-18.0618,-190.347	0/1:204:107,97:107:3778:97:3448:-249.122,0,-278.81	0/1:98:48,50:48:1671:50:1770:-130.081,0,-121.172	0/0:89:86,2:86:3045:2:68:0,-20.3861,-267.816	0/0:115:114,1:114:4026:1:36:0,-31.0202,-358.931	0/0:156:154,2:154:5368:2:68:0,-40.503,-476.792	0/0:214:214,0:214:7349:0:0:0,-64.4204,-661.474	0/0:324:320,3:320:11116:3:108:0,-87.4874,-990.286	0/0:229:224,5:224:7755:5:176:0,-52.7508,-681.812	0/1:276:122,154:122:4314:154:5367:-400.085,0,-305.354	0/1:74:33,41:33:1146:41:1442:-107.796,0,-81.1655	0/0:384:383,0:383:13209:0:0:0,-115.294,-1188.44	0/0:123:123,0:123:4278:0:0:0,-37.0267,-385.062	0/0:108:108,0:108:3819:0:0:0,-32.5112,-343.908	0/0:196:196,0:196:6776:0:0:0,-59.0019,-609.927	0/0:142:141,0:141:5012:0:0:0,-42.4452,-450.968	0/0:137:136,1:136:4754:1:36:0,-37.6428,-424.426	0/1:102:51,51:51:1787:51:1766:-128.512,0,-130.404	0/1:81:45,36:45:1565:36:1292:-92.2003,0,-116.752	0/0:80:79,1:79:2804:1:36:0,-20.4841,-249	0/0:98:98,0:98:3429:0:0:0,-29.5009,-308.823	0/0:75:75,0:75:2666:0:0:0,-22.5772,-240.185	0/0:92:92,0:92:3239:0:0:0,-27.6948,-291.73	0/1:137:64,73:64:2236:73:2612:-194.087,0,-160.259	0/0:261:259,2:259:9078:2:72:0,-71.7321,-810.171	0/0:147:145,0:145:5133:0:0:0,-43.6493,-461.754	0/0:19:19,0:19:662:0:0:0,-5.71957,-59.9024	0/0:53:48,5:48:1698:5:168:0,-0.504234,-137.654	0/0:85:84,1:84:2949:1:36:0,-21.9893,-262.045	0/0:30:30,0:30:1064:0:0:0,-9.0309,-96.0717	0/0:211:209,1:209:7327:1:36:0,-59.9778,-655.892	0/0:104:98,6:98:3430:6:216:0,-11.5166,-288.851	0/0:77:77,0:77:2624:0:0:0,-23.1793,-236.405	0/1:143:74,69:74:2579:69:2416:-174.649,0,-189.31	0/0:240:240,0:240:8347:0:0:0,-72.2472,-751.247	0/0:75:75,0:75:2570:0:0:0,-22.5772,-231.544	0/1:129:54,75:54:1932:75:2672:-201.892,0,-135.324	0/0:54:54,0:54:1895:0:0:0,-16.2556,-170.825	0/1:93:48,44:48:1681:44:1564:-112.997,0,-123.52	0/1:127:64,63:64:2251:63:2228:-162.553,0,-164.62	0/1:66:13,53:13:450:53:1892:-150.69,0,-20.9606	0/1:233:210,23:210:7232:23:824:-4.34333,0,-580.81	0/1:107:56,51:56:1991:51:1817:-131.6,0,-147.253	0/1:118:57,61:57:1997:61:2142:-157.523,0,-144.478	0/0:303:303,0:303:10617:0:0:0,-91.2121,-955.456	0/1:79:38,41:38:1351:41:1419:-104.221,0,-98.1082	0/1:69:31,38:31:1064:38:1331:-99.3158,0,-75.2931	0/1:136:64,72:64:2256:72:2543:-188.179,0,-162.351	0/0:172:172,0:172:6085:0:0:0,-51.7772,-547.264	0/1:61:44,17:44:1559:17:608:-36.6892,0,-122.238	0/1:107:51,56:51:1785:56:2012:-149.143,0,-128.718	0/0:127:117,10:117:4089:10:351:0,-6.30413,-336.272	0/0:132:132,0:132:4667:0:0:0,-39.736,-420.192	0/0:68:68,0:68:2415:0:0:0,-20.47,-217.606	0/0:156:155,1:155:5468:1:36:0,-43.3624,-488.649	0/0:139:139,0:139:4860:0:0:0,-41.8432,-437.556	0/0:76:76,0:76:2644:0:0:0,-22.8783,-238.206	0/0:142:142,0:142:4927:0:0:0,-42.7463,-443.587	0/0:220:220,0:220:7703:0:0:0,-66.2266,-693.314	0/0:66:66,0:66:2293:0:0:0,-19.868,-206.627	0/0:107:107,0:107:3724:0:0:0,-32.2102,-335.366	0/0:125:125,0:125:4327:0:0:0,-37.6287,-389.61	0/0:405:405,0:405:14052:0:0:0,-121.917,-1264.49	0/1:322:261,60:261:9055:60:2120:-94.0763,0,-717.96	0/1:111:39,72:39:1368:72:2542:-195.611,0,-90.0012	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:176:173,3:173:6083:3:108:0,-42.9061,-537.505
chr12	15084298	.	G	A	467316	PASS	AB=0.542302;ABP=143.735;AC=147;AF=0.781915;AN=188;AO=17149;CIGAR=1X;DP=21356;DPB=21356;DPRA=0;EPP=37241.6;EPPR=9125.37;GTI=2;LEN=1;MEANALT=1.05319;MQM=57.4;MQMR=59.9529;NS=94;NUMALT=1;ODDS=8.04008;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=611174;QR=148398;RO=4201;RPL=7890;RPP=240.324;RPPR=25.5888;RPR=9259;RUN=1;SAF=7890;SAP=240.324;SAR=9259;SRF=1996;SRP=25.5888;SRR=2205;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:118:56,62:56:2004:62:2224:-163.948,0,-145.112	1/1:342:0,342:0:0:342:12131:-1089.74,-102.952,0	0/1:373:153,220:153:5415:220:7844:-590.336,0,-375.197	1/1:458:2,456:2:72:456:16197:-1449.15,-131.035,0	0/1:89:45,44:45:1596:44:1575:-114.952,0,-117.136	0/1:96:45,51:45:1587:51:1823:-135.308,0,-114.028	1/1:229:0,229:0:0:229:8146:-732.92,-68.9359,0	0/1:380:170,210:170:6029:210:7506:-559.298,0,-428.319	1/1:208:0,208:0:0:208:7456:-669.338,-62.6142,0	1/1:242:2,240:2:72:240:8561:-763.459,-66.0125,0	1/1:194:1,193:1:36:193:6870:-614.613,-54.8015,0	1/1:181:0,181:0:0:181:6453:-578.253,-54.4864,0	1/1:157:0,157:0:0:157:5591:-501.255,-47.2617,0	1/1:217:0,217:0:0:217:7697:-690.82,-65.3235,0	1/1:141:2,139:2:72:139:4967:-439.475,-35.6085,0	1/1:126:0,126:0:0:126:4510:-405.507,-37.9298,0	1/1:171:1,170:1:36:170:6099:-543.624,-47.8779,0	1/1:118:0,118:0:0:118:4164:-374.696,-35.5215,0	1/1:100:0,100:0:0:100:3524:-316.828,-30.103,0	0/1:443:197,246:197:6966:246:8773:-655.945,0,-493.654	0/1:499:226,273:226:7959:273:9719:-720.917,0,-566.023	0/1:239:147,92:147:5210:92:3261:-221.557,0,-397.095	1/1:192:0,191:0:0:191:6814:-611.498,-57.4967,0	1/1:245:9,236:9:320:236:8416:-725.913,-44.61,0	1/1:204:0,204:0:0:204:7263:-650.9,-61.4101,0	0/1:639:297,342:297:10504:342:12202:-904.453,0,-752.822	1/1:557:1,556:1:36:556:19806:-1771.46,-164.075,0	1/1:78:0,78:0:0:78:2755:-247.755,-23.4803,0	0/1:555:253,301:253:8962:301:10715:-796.667,0,-639.438	0/1:328:134,194:134:4736:194:6924:-522.806,0,-327.662	1/1:294:3,291:3:108:291:10394:-924.811,-78.4277,0	0/1:4:1,3:1:36:3:108:-8.84904,0,-2.39415	0/1:41:24,17:24:855:17:604:-42.1965,0,-64.9279	1/1:13:0,13:0:0:13:456:-41.2704,-3.91339,0	0/1:28:6,22:6:212:22:769:-61.0251,0,-10.996	0/1:38:17,21:17:599:21:747:-55.9155,0,-42.799	0/1:364:168,196:168:5919:196:7036:-523.589,0,-423.25	0/1:301:140,161:140:4901:161:5721:-422.643,0,-350.631	1/1:156:0,156:0:0:156:5565:-500.329,-46.9607,0	0/0:11:10,1:10:356:1:32:0,-0.112017,-29.1819	1/1:334:0,334:0:0:334:11923:-1069.55,-100.544,0	1/1:62:0,62:0:0:62:2211:-198.702,-18.6639,0	1/1:334:1,333:1:36:333:11913:-1062.56,-96.9575,0	1/1:147:0,147:0:0:147:5228:-470.555,-44.2514,0	0/1:132:56,76:56:1967:76:2712:-204.447,0,-137.569	0/1:217:101,116:101:3560:116:4145:-307.726,0,-255.284	1/1:283:0,283:0:0:283:10112:-904.794,-85.1915,0	1/1:424:1,423:1:27:423:15059:-1351.1,-124.937,0	1/1:273:0,273:0:0:273:9741:-876.203,-82.1812,0	1/1:411:1,410:1:36:410:14592:-1308.42,-120.125,0	0/1:358:169,189:169:5879:189:6777:-502.138,0,-421.451	1/1:20:0,20:0:0:20:720:-65.1288,-6.0206,0	1/1:333:0,333:0:0:333:11860:-1064.01,-100.243,0	1/1:128:0,128:0:0:128:4560:-410.39,-38.5318,0	0/1:35:15,20:15:522:20:720:-54.2188,0,-36.7712	1/1:385:2,383:2:72:383:13670:-1215.42,-109.06,0	1/1:86:1,85:1:36:85:3043:-268.963,-22.2903,0	0/1:42:16,26:16:572:26:936:-71.9116,0,-39.1702	0/1:66:25,41:25:887:41:1460:-111.069,0,-60.2801	1/1:217:1,216:1:32:216:7653:-683.589,-62.1242,0	0/1:215:99,116:99:3469:116:4114:-305.168,0,-247.701	1/1:25:1,24:1:36:24:856:-73.5325,-3.92748,0	1/1:454:0,454:0:0:454:16235:-1456.65,-136.668,0	0/1:423:177,246:177:6279:246:8759:-660.667,0,-437.872	1/1:228:13,215:13:453:215:7662:-647.889,-27.5352,0	0/1:205:92,113:92:3287:113:4012:-297.636,0,-234.302	0/1:374:174,200:174:6208:200:7153:-530.066,0,-446.229	0/1:259:153,106:153:5410:106:3791:-263.382,0,-409.065	0/1:91:40,51:40:1418:51:1820:-136.506,0,-100.522	0/1:147:68,79:68:2381:79:2810:-208.729,0,-170.296	0/1:176:75,101:75:2649:101:3612:-271.69,0,-185.675	1/1:45:0,45:0:0:45:1616:-145.504,-13.5464,0	0/1:220:83,136:83:2930:136:4839:-367.101,0,-197.634	0/1:229:107,121:107:3794:121:4311:-317.247,0,-272.666	0/1:346:140,206:140:4980:206:7319:-552.274,0,-344.164	1/1:394:0,394:0:0:394:14072:-1265.78,-118.606,0	0/1:229:95,134:95:3345:134:4803:-362.816,0,-232.323	0/1:359:170,189:170:5999:189:6720:-495.085,0,-431.941	0/1:46:16,30:16:563:30:1076:-82.6157,0,-37.1518	1/1:272:0,272:0:0:272:9735:-873.555,-81.8802,0	1/1:287:1,286:1:36:286:10189:-909.32,-82.7973,0	1/1:598:1,595:1:36:595:21141:-1896.61,-176.175,0	1/1:209:0,209:0:0:209:7408:-666.112,-62.9153,0	1/1:181:0,181:0:0:181:6419:-577.695,-54.4864,0	1/1:150:0,150:0:0:150:5346:-480.849,-45.1545,0	1/1:311:1,310:1:21:310:11036:-990.553,-91.5204,0	1/1:55:0,55:0:0:55:1946:-174.872,-16.5567,0	1/1:150:0,150:0:0:150:5309:-475.516,-45.1545,0	1/1:143:0,143:0:0:143:5080:-456.202,-43.0473,0	1/1:144:0,144:0:0:144:5155:-463.426,-43.3483,0	0/1:229:123,106:123:4304:106:3764:-269.433,0,-318.609	0/1:121:68,53:68:2400:53:1892:-133.041,0,-179.831	1/1:339:3,336:3:108:336:12007:-1069.25,-91.974,0	1/1:246:2,244:2:68:244:8714:-777.60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chr12	15794071	.	A	C	203685	PASS	AB=0.5594;ABP=632.722;AC=94;AF=0.5;AN=188;AO=11494;CIGAR=1X;DP=20547;DPB=20547;DPRA=0;EPP=24883.8;EPPR=19596.2;GTI=0;LEN=1;MEANALT=1.06383;MQM=59.007;MQMR=59.9215;NS=94;NUMALT=1;ODDS=95.6419;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=411288;QR=323962;RO=9047;RPL=11;RPP=24866.5;RPPR=19596.2;RPR=11483;RUN=1;SAF=2;SAP=24944.5;SAR=11492;SRF=0;SRP=19648.3;SRR=9047;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:117:53,64:53:1908:64:2292:-171.18,0,-136.777	0/1:369:161,208:161:5765:208:7416:-555.575,0,-407.693	0/1:183:61,122:61:2196:122:4392:-340.114,0,-142.817	0/1:506:238,268:238:8524:268:9565:-708.303,0,-614.809	0/1:130:75,55:75:2688:55:1972:-138.463,0,-203.03	0/1:117:54,63:54:1935:63:2251:-167.435,0,-139.205	0/1:353:127,226:127:4543:226:8104:-622.958,0,-302.773	0/1:418:169,249:169:6039:249:8892:-673.406,0,-417.781	0/1:142:69,73:69:2480:73:2620:-193.155,0,-180.707	0/1:311:141,170:141:5048:170:6032:-449.166,0,-360.416	0/1:126:54,72:54:1922:72:2588:-195.21,0,-135.326	0/1:124:56,68:56:2003:68:2436:-181.331,0,-143.209	0/1:131:65,66:65:2327:66:2363:-173.28,0,-170.244	0/1:108:56,52:56:2012:52:1867:-135.696,0,-148.842	0/1:140:59,81:59:2120:81:2908:-219.606,0,-148.924	0/1:116:49,67:49:1760:67:2408:-181.946,0,-123.764	0/1:118:62,56:62:2215:56:2016:-146.119,0,-164.093	0/1:106:46,60:46:1647:60:2156:-162.267,0,-116.609	0/1:70:36,34:36:1288:34:1224:-89.3641,0,-95.1439	0/1:616:260,356:260:9328:356:12746:-961.2,0,-654.048	0/1:332:168,164:168:5997:164:5850:-425.319,0,-439.894	0/1:233:127,106:127:4543:106:3804:-272.242,0,-338.889	0/1:239:92,147:92:3304:147:5268:-402.187,0,-225.562	0/1:330:126,204:126:4519:204:7285:-556.109,0,-307.53	0/1:151:97,54:97:3465:54:1936:-129.016,0,-266.602	0/1:742:340,402:340:12144:402:14395:-1071.54,0,-868.952	0/1:343:130,213:130:4672:213:7624:-582.595,0,-317.366	0/1:72:29,43:29:1044:43:1525:-115.775,0,-72.5973	0/1:569:256,313:256:9183:313:11217:-837.919,0,-655.151	0/1:219:101,118:101:3616:118:4216:-313.146,0,-259.72	0/1:389:174,215:174:6260:215:7717:-577.318,0,-446.382	0/1:15:7,8:7:252:8:288:-21.752,0,-18.5135	0/1:51:18,33:18:644:33:1180:-91.1106,0,-42.9381	0/1:15:4,11:4:135:11:396:-31.3879,0,-7.96706	0/1:15:9,6:9:324:6:216:-15.2695,0,-24.9904	0/1:23:9,14:9:324:14:504:-38.7616,0,-22.5822	0/1:427:197,229:197:7076:229:8197:-608.521,0,-508.298	0/1:289:112,177:112:3997:177:6329:-482.278,0,-272.921	0/1:109:37,72:37:1324:72:2572:-198.502,0,-86.6465	0/1:6:1,5:1:36:5:165:-13.3665,0,-1.79209	0/1:345:128,217:128:4574:217:7773:-595.405,0,-307.962	0/1:85:31,54:31:1112:54:1940:-149.039,0,-74.8038	0/1:331:156,175:156:5583:175:6262:-463.743,0,-402.873	0/1:168:69,98:69:2461:98:3516:-265.964,0,-171.066	0/1:154:68,86:68:2444:86:3073:-230.209,0,-173.856	0/1:199:82,117:82:2939:117:4191:-317.394,0,-204.837	0/1:261:116,145:116:4163:145:5201:-388.837,0,-296.271	0/1:419:186,233:186:6660:233:8340:-624.287,0,-473.346	0/1:257:111,146:111:3976:146:5197:-390.281,0,-280.666	0/1:344:117,226:117:4189:226:8112:-626.3,0,-273.725	0/1:394:173,221:173:6180:221:7924:-594.522,0,-437.691	0/1:34:14,20:14:504:20:720:-54.8919,0,-35.4631	0/1:282:125,157:125:4456:157:5617:-420.322,0,-316.298	0/1:100:47,53:47:1680:53:1900:-141.157,0,-121.384	0/1:10:9,1:9:320:1:36:-0.586969,0,-26.1321	0/1:348:147,201:147:5253:201:7182:-541.361,0,-368.003	0/1:114:67,47:67:2378:47:1688:-117.89,0,-179.96	0/1:19:8,11:8:288:11:396:-30.2454,0,-20.5478	0/1:55:25,30:25:900:30:1068:-79.8683,0,-64.7644	0/1:214:95,119:95:3403:119:4236:-316.772,0,-242.054	0/1:165:68,97:68:2410:97:3484:-264.012,0,-167.482	0/1:16:12,4:12:432:4:144:-8.49714,0,-34.4047	0/1:531:216,315:216:7756:315:11258:-853.149,0,-538.183	0/1:441:198,243:198:7101:243:8698:-649.918,0,-506.391	0/1:122:66,56:66:2376:56:2008:-143.976,0,-177.372	0/1:222:108,114:108:3867:114:4063:-298.8,0,-281.396	0/1:388:157,231:157:5622:231:8280:-628.015,0,-389.11	0/1:342:159,182:159:5692:182:6497:-481.774,0,-409.534	0/1:64:31,33:31:1116:33:1188:-87.811,0,-81.4858	0/1:194:83,111:83:2972:111:3957:-297.634,0,-209.302	0/1:164:63,101:63:2235:101:3615:-275.852,0,-152.039	0/1:54:34,20:34:1212:20:705:-47.5172,0,-93.1307	0/1:206:89,117:89:3204:117:4181:-313.982,0,-226.138	0/1:138:80,58:80:2876:58:2080:-145.785,0,-217.534	0/1:325:116,209:116:4140:209:7474:-574.558,0,-274.946	0/1:445:201,244:201:7195:244:8726:-651.231,0,-513.646	0/1:180:112,67:112:4004:67:2412:-162.948,0,-306.306	0/1:247:109,138:109:3903:138:4917:-367.254,0,-277.098	0/1:23:13,10:13:449:10:360:-25.8115,0,-33.8137	0/1:328:147,181:147:5284:181:6471:-483.388,0,-376.944	0/1:279:113,166:113:4043:166:5917:-448.37,0,-280.067	0/1:635:291,344:291:10420:344:12334:-918.379,0,-746.549	0/1:177:67,110:67:2403:110:3952:-302.4,0,-163.244	0/1:160:54,106:54:1929:106:3812:-294.954,0,-125.72	0/1:179:77,102:77:2768:102:3643:-274.1,0,-195.431	0/1:256:117,139:117:4170:139:4962:-369.364,0,-298.384	0/1:80:40,40:40:1427:40:1436:-105.421,0,-104.644	0/1:136:53,83:53:1908:83:2961:-225.491,0,-131.057	0/1:120:52,68:52:1864:68:2444:-183.791,0,-131.916	0/1:63:22,41:22:792:41:1456:-112.343,0,-52.6408	0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chr12	15794078	.	C	T	398698	PASS	AB=0.762207;ABP=5176.36;AC=150;AF=0.797872;AN=188;AO=18526;CIGAR=1X;DP=20610;DPB=20610;DPRA=0;EPP=40223;EPPR=4450.52;GTI=9;LEN=1;MEANALT=1;MQM=59.3362;MQMR=59.9679;NS=94;NUMALT=1;ODDS=6.78308;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=661452;QR=74584;RO=2084;RPL=18526;RPP=40231.7;RPPR=4450.52;RPR=0;RUN=1;SAF=1;SAP=40223;SAR=18525;SRF=0;SRP=4528.36;SRR=2084;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:117:30,87:30:1076:87:3101:-244.028,0,-61.9323	1/1:367:0,367:0:0:367:13046:-1173.28,-110.478,0	0/1:183:29,154:29:1040:154:5497:-439.334,0,-38.8259	1/1:505:0,505:0:0:505:17993:-1618.76,-152.02,0	0/1:133:45,88:45:1616:88:3156:-244.066,0,-105.693	0/1:117:30,87:30:1076:87:3071:-241.2,0,-61.9323	1/1:360:1,359:1:36:359:12800:-1147.85,-104.773,0	0/1:416:102,314:102:3641:314:11253:-886.164,0,-202.659	1/1:138:0,138:0:0:138:4941:-444.768,-41.5421,0	1/1:311:0,311:0:0:311:11067:-995.563,-93.6203,0	1/1:127:0,127:0:0:127:4564:-410.895,-38.2308,0	1/1:126:0,126:0:0:126:4502:-404.929,-37.9298,0	1/1:137:0,137:0:0:137:4887:-439.754,-41.2411,0	1/1:110:1,109:1:36:109:3893:-346.849,-29.515,0	1/1:138:0,138:0:0:138:4941:-444.656,-41.5421,0	1/1:118:0,118:0:0:118:4244:-382.004,-35.5215,0	1/1:117:0,117:0:0:117:4154:-373.978,-35.2205,0	1/1:105:0,105:0:0:105:3753:-337.838,-31.6082,0	1/1:69:0,69:0:0:69:2480:-223.415,-20.7711,0	0/1:613:126,487:126:4505:487:17327:-1374.28,0,-221.067	0/1:336:107,229:107:3820:229:8144:-631.11,0,-242.849	0/1:235:85,150:85:3040:150:5353:-411.006,0,-203.088	1/1:242:0,242:0:0:242:8653:-778.571,-72.8493,0	1/1:333:11,322:11:396:322:11506:-999.182,-64.2602,0	1/1:151:0,151:0:0:151:5404:-486.442,-45.4555,0	0/1:749:178,571:178:6362:571:20374:-1607.14,0,-347.199	1/1:347:0,347:0:0:347:12468:-1121.5,-104.457,0	1/1:68:0,68:0:0:68:2430:-218.862,-20.47,0	0/1:574:121,453:121:4336:453:16207:-1285.2,0,-217.624	0/1:218:54,164:54:1932:164:5851:-460.715,0,-108.532	1/1:394:5,389:5:176:389:13914:-1235.71,-102.421,0	1/1:15:1,14:1:36:14:504:-42.0998,-0.917175,0	0/1:50:7,43:7:248:43:1536:-123.437,0,-7.61269	1/1:14:0,14:0:0:14:489:-44.2606,-4.21442,0	0/1:15:6,9:6:216:9:324:-24.9849,0,-15.2751	0/1:24:6,18:6:216:18:644:-51.0528,0,-12.5658	0/1:430:106,324:106:3780:324:11583:-912.271,0,-210.955	0/1:293:57,236:57:2048:236:8427:-669.803,0,-96.3898	1/1:111:0,111:0:0:111:3952:-355.519,-33.4143,0	0/1:5:1,4:1:36:4:144:-11.8075,0,-2.09312	1/1:340:0,340:0:0:340:12153:-1093.33,-102.35,0	1/1:85:0,85:0:0:85:3043:-273.864,-25.5876,0	1/1:325:1,324:1:36:324:11555:-1035.91,-94.2365,0	1/1:167:0,167:0:0:167:5971:-537.446,-50.272,0	0/1:153:35,118:35:1256:118:4248:-336.21,0,-67.1806	0/1:201:42,159:42:1504:159:5696:-451.889,0,-75.1476	1/1:261:0,261:0:0:261:9350:-840.541,-78.5688,0	1/1:410:0,410:0:0:410:14606:-1314.07,-123.422,0	1/1:258:0,258:0:0:258:9226:-829.756,-77.6657,0	1/1:350:0,350:0:0:350:12554:-1129.37,-105.361,0	0/1:394:104,290:104:3721:290:10349:-812.651,0,-216.484	1/1:33:0,33:0:0:33:1180:-106.506,-9.93399,0	1/1:285:0,285:0:0:285:10205:-917.915,-85.7936,0	1/1:102:0,102:0:0:102:3660:-329.596,-30.7051,0	0/1:10:5,5:5:176:5:180:-13.5408,0,-13.1747	1/1:358:0,358:0:0:358:12751:-1146.55,-107.769,0	1/1:112:0,112:0:0:112:4028:-362.707,-33.7154,0	0/1:19:4,15:4:144:15:540:-43.1993,0,-7.59405	0/1:54:14,40:14:504:40:1436:-113.264,0,-29.4425	1/1:218:0,218:0:0:218:7763:-698.518,-65.6245,0	0/1:167:33,134:33:1184:134:4788:-380.715,0,-56.5963	1/1:15:0,15:0:0:15:525:-47.5781,-4.51545,0	1/1:534:0,534:0:0:534:19046:-1713.52,-160.75,0	0/1:437:89,348:89:3196:348:12423:-986.212,0,-156.313	1/1:123:3,120:3:108:120:4270:-374.152,-26.9515,0	0/1:224:49,175:49:1741:175:6236:-493.68,0,-89.5417	0/1:395:81,314:81:2904:314:11219:-890.221,0,-142.689	0/1:346:93,253:93:3344:253:9034:-708.699,0,-197.02	1/1:65:0,65:0:0:65:2305:-207.565,-19.567,0	0/1:197:39,158:39:1392:158:5634:-447.67,0,-66.2752	0/1:163:32,131:32:1148:131:4686:-372.488,0,-54.5619	1/1:51:0,51:0:0:51:1828:-164.801,-15.3525,0	0/1:210:45,165:45:1616:165:5916:-468.787,0,-82.5137	0/1:138:38,100:38:1368:100:3584:-281.079,0,-81.8787	0/1:332:64,268:64:2289:268:9588:-762.549,0,-106.328	1/1:445:0,445:0:0:445:15808:-1422.28,-133.958,0	0/1:179:54,125:54:1913:125:4465:-347.993,0,-118.561	0/1:246:58,188:58:2076:188:6682:-526.479,0,-113.047	0/1:23:9,14:9:320:14:502:-38.5823,0,-22.2187	1/1:325:0,325:0:0:325:11517:-1036.08,-97.8348,0	1/1:282:0,282:0:0:282:10082:-907.013,-84.8905,0	1/1:636:1,635:1:36:635:22695:-2037.95,-187.857,0	1/1:180:0,180:0:0:180:6436:-579.167,-54.1854,0	1/1:159:0,159:0:0:159:5689:-511.954,-47.8638,0	1/1:178:0,178:0:0:178:6316:-568.44,-53.5833,0	1/1:256:0,256:0:0:256:9111:-819.6,-77.0637,0	1/1:79:0,79:0:0:79:2825:-254.453,-23.7814,0	1/1:133:0,133:0:0:133:4776:-429.773,-40.037,0	1/1:122:0,122:0:0:122:4373:-393.4,-36.7257,0	1/1:62:0,62:0:0:62:2219:-199.906,-18.6639,0	0/1:144:47,97:47:1684:97:3474:-269.14,0,-108.499	0/1:123:35,88:35:1256:88:3144:-246.029,0,-76.3186	1/1:376:0,376:0:0:376:13382:-1203.39,-113.187,0	1/1:219:0,219:0:0:219:7803:-702.233,-65.9256,0
chr12	15794091	.	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chr12	16490712	.	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chr12	16491194	.	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chr12	17080935	.	G	A	213248	PASS	AB=0.494605;ABP=4.43964;AC=150;AF=0.797872;AN=188;AO=9717;CIGAR=1X;DP=12597;DPB=12597;DPRA=0;EPP=20056.8;EPPR=5859.34;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.9818;MQMR=60;NS=94;NUMALT=1;ODDS=0.638009;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=348216;QR=102732;RO=2878;RPL=118;RPP=20090.7;RPPR=5876.17;RPR=9599;RUN=1;SAF=9713;SAP=21068.5;SAR=4;SRF=2876;SRP=6235.15;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:40,21:40:1432:21:756:-50.0044,0,-110.815	0/1:242:120,122:120:4296:122:4384:-321.882,0,-313.968	0/1:183:75,108:75:2692:108:3863:-292.776,0,-187.436	1/1:281:0,281:0:0:281:10088:-907.848,-84.5894,0	0/1:127:52,75:52:1845:75:2692:-204.293,0,-128.097	0/1:82:41,41:41:1472:41:1476:-108.452,0,-108.092	1/1:207:0,207:0:0:207:7417:-667.566,-62.3132,0	0/1:227:113,114:113:4048:114:4066:-297.731,0,-296.173	1/1:94:0,94:0:0:94:3376:-304.055,-28.2968,0	1/1:175:0,175:0:0:175:6274:-564.752,-52.6803,0	1/1:72:0,72:0:0:72:2579:-232.359,-21.6742,0	1/1:95:0,95:0:0:95:3416:-307.653,-28.5979,0	1/1:73:0,73:0:0:73:2628:-236.766,-21.9752,0	1/1:67:1,66:1:36:66:2357:-208.766,-16.5707,0	1/1:104:0,104:0:0:104:3732:-336.08,-31.3071,0	1/1:65:0,65:0:0:65:2319:-208.969,-19.567,0	1/1:72:0,72:0:0:72:2579:-232.359,-21.6742,0	1/1:74:1,73:1:36:73:2624:-232.809,-18.6779,0	1/1:58:0,58:0:0:58:2065:-186.119,-17.4597,0	0/1:345:166,179:166:5934:179:6419:-473.941,0,-430.313	0/1:222:106,116:106:3781:116:4146:-306.492,0,-273.659	0/1:148:99,48:99:3541:48:1720:-110.474,0,-274.286	1/1:83:3,80:3:104:80:2876:-249.373,-15.2827,0	1/1:190:7,183:7:252:183:6549:-566.462,-34.1667,0	1/1:162:2,160:2:72:160:5739:-509.788,-41.9301,0	0/1:388:187,201:187:6676:201:7219:-532.961,0,-484.117	1/1:248:0,248:0:0:248:8900:-800.911,-74.6554,0	1/1:51:0,51:0:0:51:1836:-165.521,-15.3525,0	0/1:413:214,199:214:7650:199:7099:-514.642,0,-564.211	0/1:170:92,78:92:3289:78:2800:-201.064,0,-245.053	1/1:132:0,132:0:0:132:4721:-425.048,-39.736,0	0/1:14:5,9:5:168:9:324:-25.2914,0,-11.2365	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.2125	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:7:3,4:3:108:4:136:-10.4683,0,-7.96796	0/1:11:3,8:3:108:8:288:-22.9561,0,-6.76384	0/1:310:167,143:167:5991:143:5136:-369.06,0,-445.974	0/1:249:120,129:120:4304:129:4636:-342.444,0,-312.579	1/1:100:1,99:1:36:99:3564:-317.368,-26.5047,0	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:269:0,269:0:0:269:9641:-867.639,-80.9771,0	1/1:51:0,51:0:0:51:1828:-164.801,-15.3525,0	1/1:194:0,194:0:0:194:6941:-624.749,-58.3998,0	1/1:83:0,83:0:0:83:2963:-266.903,-24.9855,0	0/1:89:49,40:49:1760:40:1432:-102.386,0,-131.892	0/1:82:38,44:38:1360:44:1580:-117.807,0,-98.0161	1/1:163:0,163:0:0:163:5840:-525.71,-49.0679,0	1/1:219:0,219:0:0:219:7811:-703.017,-65.9256,0	1/1:165:0,165:0:0:165:5913:-532.275,-49.67,0	1/1:188:0,188:0:0:188:6720:-604.872,-56.5936,0	0/1:150:63,87:63:2232:87:3124:-236.231,0,-155.987	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:289:0,289:0:0:289:10357:-932.046,-86.9977,0	1/1:75:0,75:0:0:75:2681:-241.533,-22.5773,0	0/1:17:8,9:8:288:9:324:-24.3883,0,-21.1499	1/1:193:0,193:0:0:193:6914:-622.321,-58.0988,0	1/1:49:1,48:1:36:48:1724:-151.847,-11.1522,0	1/1:13:0,13:0:0:13:456:-41.3732,-3.91339,0	1/1:29:0,29:0:0:29:1044:-94.2748,-8.72987,0	1/1:131:0,131:0:0:131:4700:-423.159,-39.4349,0	0/1:148:70,78:70:2499:78:2782:-206.067,0,-180.61	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:233:0,233:0:0:233:8368:-753.122,-70.14,0	0/1:253:121,132:121:4326:132:4736:-350.237,0,-313.354	1/1:128:7,121:7:252:121:4310:-365.046,-15.5029,0	0/1:112:64,48:64:2277:48:1715:-120.919,0,-171.475	0/1:198:117,81:117:4157:81:2906:-202.171,0,-314.71	0/1:179:128,50:128:4588:50:1792:-107.619,0,-359.141	1/1:36:0,36:0:0:36:1296:-116.944,-10.8371,0	0/1:107:51,56:51:1780:56:2012:-149.143,0,-128.267	0/1:130:57,73:57:2044:73:2620:-196.913,0,-145.098	1/1:38:0,38:0:0:38:1349:-121.708,-11.4391,0	0/1:157:63,94:63:2236:94:3376:-256.793,0,-154.24	0/1:104:51,53:51:1828:53:1896:-139.611,0,-133.494	0/1:189:97,92:97:3399:92:3269:-237.515,0,-249.228	1/1:243:0,243:0:0:243:8717:-784.517,-73.1503,0	0/1:151:70,81:70:2480:81:2886:-214.519,0,-177.997	0/1:166:91,75:91:3245:75:2681:-191.517,0,-242.299	0/1:7:6,1:6:216:1:36:-1.49107,0,-17.6833	1/1:196:0,196:0:0:196:7010:-630.96,-59.0019,0	1/1:152:0,152:0:0:152:5468:-492.245,-45.7566,0	1/1:294:0,294:0:0:294:10548:-949.231,-88.5028,0	1/1:172:0,172:0:0:172:6183:-556.564,-51.7772,0	1/1:69:0,69:0:0:69:2484:-223.813,-20.7711,0	1/1:85:0,85:0:0:85:3048:-274.549,-25.5876,0	1/1:193:0,193:0:0:193:6921:-622.953,-58.0988,0	1/1:61:0,61:0:0:61:2188:-197.186,-18.3628,0	1/1:82:0,82:0:0:82:2940:-264.804,-24.6845,0	1/1:75:0,75:0:0:75:2686:-241.984,-22.5773,0	1/1:40:0,40:0:0:40:1440:-129.898,-12.0412,0	0/1:108:49,59:49:1742:59:2112:-157.838,0,-124.552	0/1:85:47,38:47:1684:38:1364:-97.4732,0,-126.259	1/1:154:0,154:0:0:154:5503:-495.395,-46.3586,0	1/1:152:0,152:0:0:152:5454:-490.986,-45.7566,0
chr12	17262235	.	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chr12	17942990	.	C	T	60699	PASS	AB=0.336034;ABP=2567.97;AC=39;AF=0.207447;AN=188;AO=3718;CIGAR=1X;DP=19923;DPB=19923;DPRA=1.98025;EPP=8067.86;EPPR=35144;GTI=2;LEN=1;MEANALT=1.06383;MQM=35.755;MQMR=39.0421;NS=94;NUMALT=1;ODDS=0.851572;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=132390;QR=577540;RO=16199;RPL=1994;RPP=45.587;RPPR=18.9656;RPR=1724;RUN=1;SAF=1995;SAP=46.2201;SAR=1723;SRF=8276;SRP=19.7141;SRR=7923;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:72:46,26:46:1610:26:913:-52.1967,0,-115.861	0/1:321:212,109:212:7544:109:3872:-198.703,0,-530.863	0/1:350:223,127:223:7900:127:4533:-259.63,0,-570.761	0/0:366:365,1:365:13018:1:36:0,-107.274,-1028.63	0/1:180:121,59:121:4291:59:2112:-112.064,0,-307.589	0/1:156:104,52:104:3707:52:1856:-102.17,0,-272.704	0/0:167:167,0:167:5956:0:0:0,-50.272,-454.59	0/1:505:344,160:344:12284:160:5712:-297.527,0,-876.931	0/0:155:155,0:155:5544:0:0:0,-46.6596,-457.197	0/0:212:212,0:212:7596:0:0:0,-63.8184,-585.516	0/0:109:109,0:109:3879:0:0:0,-32.8123,-320.129	0/0:154:154,0:154:5451:0:0:0,-46.3586,-443.635	0/0:108:107,0:107:3772:0:0:0,-32.2102,-305.864	0/0:90:90,0:90:3232:0:0:0,-27.0927,-253.446	0/0:130:130,0:130:4655:0:0:0,-39.1339,-374.042	0/0:90:90,0:90:3212:0:0:0,-27.0927,-260.954	0/0:81:81,0:81:2903:0:0:0,-24.3834,-224.976	0/0:81:81,0:81:2890:0:0:0,-24.3834,-221.686	0/0:70:70,0:70:2512:0:0:0,-21.0721,-201.153	0/1:592:410,182:410:14625:182:6501:-354.585,0,-1073.09	0/1:448:283,165:283:10098:165:5903:-344.399,0,-729.836	0/1:232:121,111:121:4328:111:3955:-256.606,0,-303.674	0/0:232:232,0:232:8316:0:0:0,-69.839,-679.131	0/0:280:267,13:267:9556:13:464:0,-48.8778,-720.589	0/0:138:138,0:138:4915:0:0:0,-41.5421,-394.776	0/1:770:489,281:489:17417:281:10000:-576.986,0,-1238.84	0/0:414:412,2:412:14715:2:72:0,-118.587,-1164.84	0/0:89:89,0:89:3158:0:0:0,-26.7917,-251.717	0/1:682:481,200:481:17208:200:7117:-378.104,0,-1261.09	0/1:308:203,105:203:7259:105:3756:-202.934,0,-523.756	0/0:192:191,0:191:6824:0:0:0,-57.4967,-559.995	0/1:11:8,3:8:288:3:108:-6.36124,0,-21.992	0/1:34:24,10:24:856:10:356:-20.2575,0,-65.0036	0/0:10:10,0:10:345:0:0:0,-3.0103,-27.9326	0/1:26:12,14:12:428:14:500:-33.4572,0,-30.1873	0/1:63:29,34:29:1032:34:1196:-82.1666,0,-70.8948	0/1:610:399,211:399:14182:211:7515:-413.19,0,-1016.29	0/1:249:182,67:182:6507:67:2373:-114.102,0,-471.609	0/0:78:78,0:78:2787:0:0:0,-23.4803,-224.716	0/1:16:7,9:7:252:9:320:-21.7122,0,-16.7674	0/0:283:282,1:282:10053:1:36:0,-82.2887,-789.452	0/0:42:42,0:42:1487:0:0:0,-12.6433,-122.096	0/0:325:325,0:325:11597:0:0:0,-97.8347,-937.21	0/0:173:173,0:173:6112:0:0:0,-52.0782,-478.041	0/1:220:154,66:154:5515:66:2356:-118.639,0,-393.952	0/1:251:168,83:168:5934:83:2963:-171.403,0,-434.622	0/0:206:206,0:206:7379:0:0:0,-62.0122,-604.76	0/0:290:290,0:290:10311:0:0:0,-87.2987,-814.237	0/0:178:178,0:178:6360:0:0:0,-53.5833,-501.376	0/0:194:194,0:194:6917:0:0:0,-58.3998,-546.478	0/1:418:283,135:283:10126:135:4757:-248.082,0,-724.77	0/0:27:27,0:27:972:0:0:0,-8.12781,-84.8664	0/0:281:280,1:280:9990:1:36:0,-81.6867,-788.186	0/0:57:57,0:57:2044:0:0:0,-17.1587,-168.728	0/1:11:7,4:7:248:4:144:-9.22279,0,-17.9278	0/0:234:234,0:234:8337:0:0:0,-70.441,-689.782	0/0:87:86,0:86:3064:0:0:0,-25.8886,-252.408	0/1:33:29,4:29:1017:4:144:-3.14967,0,-78.5612	0/0:7:7,0:7:248:0:0:0,-2.10721,-20.1225	0/0:154:154,0:154:5468:0:0:0,-46.3586,-436.472	0/1:258:169,89:169:6011:89:3188:-166.087,0,-418.419	0/0:16:16,0:16:576:0:0:0,-4.81648,-50.8057	0/0:369:369,0:369:13148:0:0:0,-111.08,-1077.45	0/1:531:345,186:345:12349:186:6619:-365.823,0,-873.841	0/0:129:122,7:122:4353:7:244:0,-18.786,-337.078	0/1:261:179,82:179:6373:82:2932:-159.346,0,-453.47	0/1:565:386,178:386:13730:178:6358:-352.222,0,-1001.47	0/1:359:230,129:230:8224:129:4590:-270.48,0,-601.195	0/0:61:61,0:61:2145:0:0:0,-18.3628,-184.271	0/1:204:138,66:138:4956:66:2372:-122.39,0,-355.565	0/1:217:144,73:144:5112:73:2565:-136.352,0,-362.329	0/0:31:31,0:31:1095:0:0:0,-9.33193,-93.6226	0/1:205:127,78:127:4503:78:2776:-160.489,0,-312.935	0/1:183:135,48:135:4844:48:1701:-83.8822,0,-365.233	0/1:445:283,162:283:10076:162:5759:-333.389,0,-721.179	0/0:224:224,0:224:7998:0:0:0,-67.4307,-643.262	0/1:286:209,77:209:7456:77:2728:-131.823,0,-539.465	0/1:395:286,109:286:10175:109:3884:-187.819,0,-732.448	0/1:27:18,9:18:644:9:324:-18.767,0,-49.2398	0/0:232:231,1:231:8236:1:36:0,-66.9362,-650.605	0/0:165:165,0:165:5895:0:0:0,-49.6699,-480.324	0/0:302:302,0:302:10797:0:0:0,-90.9111,-843.337	0/0:157:157,0:157:5553:0:0:0,-47.2617,-430.088	0/0:127:127,0:127:4521:0:0:0,-38.2308,-358.538	0/0:131:131,0:131:4667:0:0:0,-39.4349,-362.52	0/0:269:268,1:268:9512:1:36:0,-77.6309,-746.03	0/0:46:46,0:46:1635:0:0:0,-13.8474,-125.85	0/0:111:111,0:111:3939:0:0:0,-33.4143,-317.049	0/0:134:134,0:134:4751:0:0:0,-40.338,-389.621	0/0:60:60,0:60:2152:0:0:0,-18.0618,-177.863	0/1:168:103,65:103:3656:65:2312:-138.089,0,-266.122	0/1:322:199,123:199:7075:123:4360:-255.063,0,-515.719	0/0:358:358,0:358:12844:0:0:0,-107.769,-1022.24	0/0:233:233,0:233:8308:0:0:0,-70.14,-648.22
chr12	17943014	.	T	A	282216	PASS	AB=0.338427;ABP=2629.48;AC=147;AF=0.781915;AN=188;AO=12500;CIGAR=1X;DP=20181;DPB=20181;DPRA=0;EPP=26003.5;EPPR=15958.1;GTI=15;LEN=1;MEANALT=1.05319;MQM=36.1171;MQMR=42.0737;NS=94;NUMALT=1;ODDS=1.27371;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=444622;QR=273381;RO=7676;RPL=6429;RPP=25.2747;RPPR=46.038;RPR=6071;RUN=1;SAF=6296;SAP=4.48065;SAR=6204;SRF=3950;SRP=17.2046;SRR=3726;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:74:53,21:53:1895:21:748:-37.7885,0,-138.491	0/1:325:213,112:213:7571:112:3983:-213.172,0,-523.694	0/1:356:242,114:242:8609:114:3990:-221.555,0,-617.297	1/1:362:0,362:0:0:362:12867:-1015.57,-108.973,0	0/1:180:120,60:120:4287:60:2133:-115.647,0,-305.489	0/1:159:121,38:121:4310:38:1368:-65,0,-317.142	1/1:171:0,171:0:0:171:6011:-458.469,-51.4761,0	0/1:517:338,179:338:12038:179:6362:-347.04,0,-848.298	1/1:161:0,161:0:0:161:5688:-470.467,-48.4658,0	1/1:214:0,214:0:0:214:7623:-585.642,-64.4204,0	1/1:107:0,107:0:0:107:3823:-314.207,-32.2102,0	1/1:152:0,152:0:0:152:5411:-439.59,-45.7566,0	1/1:108:1,107:1:36:107:3821:-304.25,-28.913,0	1/1:92:0,92:0:0:92:3292:-258.827,-27.6948,0	1/1:131:0,131:0:0:131:4678:-376.627,-39.4349,0	1/1:89:0,89:0:0:89:3166:-256.834,-26.7917,0	1/1:82:0,82:0:0:82:2928:-226.302,-24.6845,0	1/1:80:0,80:0:0:80:2864:-219.019,-24.0824,0	1/1:70:0,70:0:0:70:2504:-200.766,-21.0721,0	0/1:592:370,222:370:13184:222:7866:-473.143,0,-948.853	0/1:451:314,137:314:11162:137:4840:-262.46,0,-807.605	0/1:234:197,37:197:6982:37:1315:-34.6177,0,-521.952	1/1:238:0,238:0:0:238:8419:-687.012,-71.6451,0	0/1:282:33,249:33:1188:249:8846:-609.079,0,-13.9707	1/1:137:1,136:1:36:136:4846:-384.722,-37.7604,0	0/1:788:540,248:540:19295:248:8837:-469.898,0,-1387.3	1/1:417:2,415:2:72:415:14743:-1165.94,-119.49,0	1/1:91:0,91:0:0:91:3251:-258.169,-27.3937,0	0/1:694:456,237:456:16278:237:8422:-475.084,0,-1185.95	0/1:314:210,104:210:7505:104:3689:-205.03,0,-532.485	1/1:190:1,189:1:36:189:6704:-544.273,-53.6,0	0/1:11:8,3:8:288:3:108:-5.97047,0,-22.3741	0/1:33:21,12:21:752:12:428:-27.3105,0,-56.57	1/1:10:0,10:0:0:10:356:-28.9059,-3.0103,0	0/1:25:17,8:17:599:8:284:-17.6036,0,-42.8808	0/1:61:50,11:50:1792:11:383:-14.0967,0,-135.031	0/1:626:423,203:423:15101:203:7278:-400.441,0,-1073.25	0/1:249:164,85:164:5835:85:3031:-162.462,0,-420.303	1/1:78:0,78:0:0:78:2791:-223.76,-23.4803,0	0/1:15:11,4:11:388:4:140:-7.04091,0,-28.1276	1/1:283:1,282:1:36:282:10057:-786.618,-82.2887,0	1/1:42:0,41:0:0:41:1455:-118.777,-12.3422,0	1/1:323:1,322:1:36:322:11470:-920.1,-93.73,0	1/1:177:1,176:1:36:176:6311:-486.916,-49.8016,0	0/1:224:140,84:140:4993:84:2994:-169.822,0,-346.251	0/1:249:165,84:165:5862:84:2966:-171.721,0,-427.3	1/1:205:1,204:1:36:204:7243:-590.509,-58.8084,0	1/1:301:0,301:0:0:301:10687:-840.721,-90.61,0	1/1:178:1,177:1:36:177:6272:-489.683,-50.1026,0	1/1:196:0,196:0:0:196:6984:-551.834,-59.0019,0	0/1:424:278,146:278:9909:146:5167:-287.294,0,-696.304	1/1:26:0,26:0:0:26:919:-80.3377,-7.82678,0	1/1:278:1,277:1:36:277:9902:-778.747,-80.7836,0	1/1:61:0,61:0:0:61:2167:-177.584,-18.3628,0	0/1:14:12,2:12:428:2:72:-1.30083,0,-31.9359	1/1:239:2,237:2:63:237:8344:-683.69,-66.0544,0	1/1:87:0,87:0:0:87:3100:-255.538,-26.1896,0	0/1:31:13,18:13:464:18:648:-45.9259,0,-32.5573	1/1:7:0,7:0:0:7:248:-20.1225,-2.10721,0	1/1:155:0,155:0:0:155:5495:-436.748,-46.6597,0	0/1:264:175,89:175:6237:89:3184:-165.978,0,-432.911	1/1:16:0,16:0:0:16:568:-50.1821,-4.81648,0	1/1:372:0,372:0:0:372:13228:-1083.99,-111.983,0	0/1:541:373,168:373:13325:168:5995:-311.811,0,-947.266	0/1:128:21,107:21:756:107:3796:-270.358,0,-26.4948	0/1:269:187,82:187:6657:82:2911:-144.839,0,-484.207	0/1:575:372,203:372:13243:203:7209:-413.425,0,-956.429	0/1:369:295,74:295:10540:74:2638:-102.28,0,-793.184	1/1:62:0,62:0:0:62:2224:-191.011,-18.6639,0	0/1:209:149,60:149:5328:60:2139:-104.575,0,-381.312	0/1:226:153,72:153:5407:72:2547:-134.666,0,-379.273	1/1:32:0,32:0:0:32:1126:-95.913,-9.63296,0	0/1:210:143,67:143:5098:67:2381:-122.811,0,-362.894	0/1:184:113,71:113:4013:71:2518:-158.954,0,-287.071	0/1:459:314,145:314:11206:145:5115:-273.552,0,-809.687	1/1:229:1,228:1:36:228:8124:-649.09,-65.3402,0	0/1:290:187,103:187:6605:103:3700:-203.514,0,-472.768	0/1:408:264,144:264:9394:144:5140:-281.584,0,-667.879	0/1:26:19,7:19:684:7:252:-14.4564,0,-51.3145	1/1:226:1,225:1:36:225:7964:-624.708,-65.13,0	1/1:169:1,168:1:36:168:5995:-485.528,-47.3531,0	1/1:304:0,304:0:0:304:10795:-841.211,-91.5131,0	1/1:165:0,165:0:0:165:5896:-456.379,-49.67,0	1/1:130:0,130:0:0:130:4635:-367.386,-39.1339,0	1/1:134:0,134:0:0:134:4793:-371.755,-40.338,0	1/1:273:1,272:1:36:272:9721:-761.769,-78.835,0	1/1:46:0,46:0:0:46:1652:-126.808,-13.8474,0	1/1:114:0,114:0:0:114:4096:-328.022,-34.3174,0	1/1:137:0,137:0:0:137:4858:-397.788,-41.2411,0	1/1:58:0,58:0:0:58:2071:-170.775,-17.4597,0	0/1:169:119,50:119:4231:50:1759:-96.5474,0,-306.888	0/1:328:266,60:266:9339:60:2152:-77.8366,0,-692.173	1/1:359:0,359:0:0:359:12763:-1016.4,-108.07,0	1/1:234:0,234:0:0:234:8339:-649.482,-70.441,0
chr12	18593770	.	GTGGAGT	ATGGAGT,ATGGGAGT	245311	PASS	AB=0.690718,0.303541;ABP=1653.77,1754.65;AC=150,38;AF=0.797872,0.202128;AN=188;AO=9758,1597;CIGAR=1X6M,1X1M1I5M;DP=11429;DPB=11658.1;DPRA=0,1.19752;EPP=21192.2,3470.85;EPPR=24.725;GTI=4;LEN=1,8;MEANALT=2.09574,2.65116;MQM=59.9995,59.7107;MQMR=60;NS=94;NUMALT=2;ODDS=1.83925;PAIRED=0,0;PAIREDR=0;PAO=2.5,2.5;PQA=88,88;PQR=0;PRO=0;QA=349425,56108;QR=353;RO=10;RPL=9758,1597;RPP=21192.2,3470.85;RPPR=24.725;RPR=0,0;RUN=1,1;SAF=0,0;SAP=21192.2,3470.85;SAR=9758,1597;SRF=0;SRP=24.725;SRR=10;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:141:0,99,40:0:0:99,40:3535,1397:-401.805,-113.601,-83.7989,-288.173,0,-276.132	1/2:129:0,93,35:0:0:93,35:3336,1230:-372.323,-100.213,-72.2169,-272.21,0,-261.674	1/2:212:0,145,67:0:0:145,67:5212,2359:-617.604,-192.391,-148.742,-425.567,0,-405.398	1/1:279:0,277,0:0:0:277,0:9929,0:-893.191,-83.3853,0,-893.191,-83.3853,-893.191	1/2:88:0,47,41:0:0:47,41:1688,1457:-256.786,-119.085,-104.936,-138.059,0,-125.716	1/2:58:0,38,20:0:0:38,20:1349,720:-169.019,-59.1082,-47.669,-110.269,0,-104.249	1/1:174:0,174,0:0:0:174,0:6240,0:-561.694,-52.3792,0,-561.694,-52.3792,-561.694	1/2:191:0,157,34:0:0:157,34:5598,1186:-553.124,-96.7939,-49.5322,-456.68,0,-446.445	1/1:195:0,195,0:0:0:195,0:6980,0:-628.264,-58.7009,0,-628.264,-58.7009,-628.264	1/1:86:0,84,0:0:0:84,0:3020,0:-271.699,-25.2865,0,-271.699,-25.2865,-271.699	1/1:51:0,51,0:0:0:51,0:1836,0:-165.521,-15.3525,0,-165.521,-15.3525,-165.521	1/1:124:0,123,0:0:0:123,0:4406,0:-396.291,-37.0267,0,-396.291,-37.0267,-396.291	1/1:98:0,98,0:0:0:98,0:3515,0:-316.559,-29.5009,0,-316.559,-29.5009,-316.559	1/1:32:0,32,0:0:0:32,0:1140,0:-102.909,-9.63296,0,-102.909,-9.63296,-102.909	1/1:69:0,69,0:0:0:69,0:2472,0:-222.734,-20.7711,0,-222.734,-20.7711,-222.734	1/1:61:0,61,0:0:0:61,0:2192,0:-197.545,-18.3628,0,-197.545,-18.3628,-197.545	1/1:29:0,29,0:0:0:29,0:1044,0:-94.2748,-8.72987,0,-94.2748,-8.72987,-94.2748	1/1:24:0,24,0:0:0:24,0:856,0:-77.3611,-7.22472,0,-77.3611,-7.22472,-77.3611	1/1:35:0,35,0:0:0:35,0:1252,0:-112.985,-10.5361,0,-112.985,-10.5361,-112.985	1/2:230:0,136,94:0:0:136,94:4880,3324:-669.116,-271.06,-230.12,-398.411,0,-370.114	1/2:134:0,81,53:0:0:81,53:2897,1855:-387.466,-151.238,-126.854,-236.581,0,-220.626	1/2:229:1,120,107:1:36:120,107:4292,3746:-651.534,-301.854,-268.668,-347.076,0,-317.803	1/1:183:0,182,0:0:0:182,0:6497,0:-584.535,-54.7875,0,-584.535,-54.7875,-584.535	1/1:120:0,116,4:0:0:116,4:4137,144:-372.154,-34.9195,0,-360.404,-22.81,-359.2	1/1:145:0,144,1:0:0:144,1:5156,36:-463.821,-43.3483,0,-460.884,-40.0511,-460.583	1/2:363:1,278,82:1:36:278,82:9929,2882:-1040.82,-231.615,-150.866,-806.582,0,-784.835	1/1:300:1,295,0:1:35:295,0:10556,0:-946.475,-85.9506,0,-946.776,-88.8039,-949.623	1/1:44:0,44,0:0:0:44,0:1580,0:-142.492,-13.2453,0,-142.492,-13.2453,-142.492	1/2:365:0,257,107:0:0:257,107:9176,3768:-1054.79,-306.698,-229.334,-748.088,0,-715.878	1/2:160:0,118,42:0:0:118,42:4236,1478:-466.153,-120.611,-85.0892,-345.837,0,-333.194	1/1:132:0,130,1:0:0:130,1:4656,36:-418.842,-39.1339,0,-415.905,-36.1965,-415.603	1/2:15:0,12,3:0:0:12,3:432,105:-44.1499,-8.89288,-5.28052,-35.6088,0,-34.7057	1/2:36:0,24,12:0:0:24,12:864,416:-104.666,-34.1588,-26.9341,-70.8578,0,-67.2455	1/1:11:0,11,0:0:0:11,0:396,0:-35.9827,-3.31133,0,-35.9827,-3.31133,-35.9827	1/2:7:0,6,1:0:0:6,1:208,27:-19.3707,-2.39875,-0.592573,-17.2529,0,-16.9519	1/2:31:0,14,14:0:0:14,14:504,470:-79.181,-38.0481,-33.8337,-41.1238,0,-36.9094	1/2:237:1,194,40:1:36:194,40:6972,1418:-680.996,-112.511,-57.0489,-565.844,0,-556.74	1/2:153:0,90,62:0:0:90,62:3228,2201:-442.689,-179.395,-152.302,-263.398,0,-244.734	1/1:43:0,43,0:0:0:43,0:1531,0:-138.082,-12.9443,0,-138.082,-12.9443,-138.082	1/2:7:0,5,2:0:0:5,2:180,72:-20.9217,-6.23466,-4.72951,-15.0469,0,-14.4449	1/1:183:0,182,0:0:0:182,0:6505,0:-585.174,-54.7875,0,-585.174,-54.7875,-585.174	1/1:22:0,22,0:0:0:22,0:792,0:-71.6057,-6.62266,0,-71.6057,-6.62266,-71.6057	1/1:235:0,234,0:0:0:234,0:8360,0:-752.095,-70.441,0,-752.095,-70.441,-752.095	1/1:62:0,62,0:0:0:62,0:2224,0:-200.424,-18.6639,0,-200.424,-18.6639,-200.424	1/2:61:0,47,14:0:0:47,14:1680,484:-176.664,-39.6732,-25.5248,-137.339,0,-133.124	1/2:211:0,145,64:0:0:145,64:5204,2275:-609.906,-185.414,-141.764,-424.537,0,-405.271	1/1:131:0,130,0:0:0:130,0:4672,0:-420.438,-39.1339,0,-420.438,-39.1339,-420.438	1/1:251:0,248,0:0:0:248,0:8868,0:-797.726,-74.6554,0,-797.726,-74.6554,-797.726	1/1:167:0,166,0:0:0:166,0:5941,0:-534.437,-49.971,0,-534.437,-49.971,-534.437	1/1:125:1,124,0:1:36:124,0:4444,0:-396.532,-34.0305,0,-396.833,-37.3277,-399.771	1/2:260:1,191,68:1:36:191,68:6842,2378:-748.164,-190.466,-135.906,-555.054,0,-537.521	1/1:5:0,5,0:0:0:5,0:180,0:-16.5521,-1.50515,0,-16.5521,-1.50515,-16.5521	1/1:202:0,201,0:0:0:201,0:7193,0:-647.061,-60.507,0,-647.061,-60.507,-647.061	1/1:106:0,106,0:0:0:106,0:3800,0:-342.197,-31.9092,0,-342.197,-31.9092,-342.197	1/1:17:0,13,1:0:0:13,1:460,34:-41.3827,-3.91339,0,-38.6256,-1.15955,-38.3245	1/1:147:0,146,0:0:0:146,0:5224,0:-470.01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chr12	18798187	.	G	A	7.99235e-12	PASS	AB=0.435308;ABP=33.0722;AC=11;AF=0.0585106;AN=188;AO=749;CIGAR=1X;DP=16371;DPB=16371;DPRA=0.498514;EPP=1629.44;EPPR=33925.8;GTI=10;LEN=1;MEANALT=1;MQM=10.8838;MQMR=28.7541;NS=94;NUMALT=1;ODDS=59.1568;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26710;QR=550979;RO=15622;RPL=0;RPP=1629.44;RPPR=33925.8;RPR=749;RUN=1;SAF=0;SAP=1629.44;SAR=749;SRF=0;SRP=33925.8;SRR=15622;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:13:12,1:12:378:1:36:0,-2.81465,-27.0238	0/1:172:115,57:115:4052:57:2048:-4.69624,0,-237.287	0/0:53:43,10:43:1518:10:360:0,-6.13756,-98.3206	0/0:115:115,0:115:4065:0:0:0,-34.6184,-285.517	0/0:31:26,5:26:923:5:180:0,-4.36948,-60.0132	0/0:34:28,6:28:995:6:216:0,-4.19196,-64.9439	0/0:56:56,0:56:2016:0:0:0,-16.8577,-142.134	0/0:93:67,26:67:2378:26:936:0,-1.90553,-141.021	0/0:85:85,0:85:3018:0:0:0,-25.5875,-214.081	0/0:90:90,0:90:3215:0:0:0,-27.0927,-226.554	0/0:627:627,0:627:22041:0:0:0,-188.746,-1565.39	0/0:33:33,0:33:1152:0:0:0,-9.93399,-83.006	0/0:32:32,0:32:1122:0:0:0,-9.63296,-78.9842	0/0:65:65,0:65:2212:0:0:0,-19.5669,-157.767	0/0:40:40,0:40:1425:0:0:0,-12.0412,-101.333	0/0:55:55,0:55:1959:0:0:0,-16.5566,-138.722	0/0:78:78,0:78:2746:0:0:0,-23.4803,-195.074	0/0:45:45,0:45:1569:0:0:0,-13.5463,-109.66	0/0:177:177,0:177:6209:0:0:0,-53.2823,-438.125	0/0:107:84,23:84:2962:23:824:0,-11.2516,-189.299	0/1:86:52,34:52:1820:34:1206:-9.27587,0,-105.261	0/0:40:29,11:29:1028:11:396:0,-2.05101,-61.4803	0/0:24:24,0:24:852:0:0:0,-7.22472,-61.1645	0/0:55:51,4:51:1783:4:144:0,-12.4913,-123.775	0/0:29:29,0:29:1040:0:0:0,-8.72987,-73.7477	0/0:171:134,37:134:4700:37:1332:0,-18.0189,-294.285	0/0:125:125,0:125:4427:0:0:0,-37.6287,-314.836	0/0:21:21,0:21:752:0:0:0,-6.32163,-53.5125	0/0:134:98,36:98:3481:36:1279:0,-1.29639,-200.076	0/0:271:200,71:200:7075:71:2556:0,-10.2136,-422.38	0/0:106:106,0:106:3745:0:0:0,-31.9092,-264.721	0/0:350:349,1:349:12386:1:36:0,-104.262,-873.611	0/0:369:369,0:369:13065:0:0:0,-111.08,-925.28	0/0:1080:1080,0:1080:38136:0:0:0,-325.112,-2685.14	0/0:607:606,1:606:21379:1:36:0,-181.626,-1507.51	0/0:270:270,0:270:9462:0:0:0,-81.2781,-670.792	0/1:113:58,55:58:2046:55:1968:-18.2945,0,-107.363	0/0:140:114,26:114:3993:26:913:0,-16.6311,-260.021	0/0:460:460,0:460:15972:0:0:0,-138.474,-1140.11	0/0:243:243,0:243:8615:0:0:0,-73.1503,-601.998	0/0:120:120,0:120:4264:0:0:0,-36.1236,-299.332	0/0:202:202,0:202:7118:0:0:0,-60.8081,-504.708	0/0:77:77,0:77:2715:0:0:0,-23.1793,-190.454	0/0:35:35,0:35:1201:0:0:0,-10.536,-86.5629	0/1:36:21,15:21:712:15:536:-2.83827,0,-41.3119	0/0:67:51,16:51:1802:16:559:0,-5.1512,-110.443	0/0:83:83,0:83:2895:0:0:0,-24.9855,-207.549	0/0:153:153,0:153:5412:0:0:0,-46.0576,-380.397	0/0:127:127,0:127:4512:0:0:0,-38.2308,-314.475	0/0:135:135,0:135:4774:0:0:0,-40.639,-339.679	0/0:78:61,17:61:2180:17:612:0,-8.09544,-136.554	0/0:1176:1176,0:1176:41743:0:0:0,-354.011,-2943.56	0/0:134:134,0:134:4737:0:0:0,-40.338,-333.41	0/0:59:59,0:59:2092:0:0:0,-17.7608,-144.573	0/0:490:490,0:490:17230:0:0:0,-147.505,-1214.79	0/0:77:77,0:77:2684:0:0:0,-23.1793,-193.447	0/0:18:18,0:18:648:0:0:0,-5.41854,-45.4336	0/0:528:528,0:528:18714:0:0:0,-158.944,-1302.44	0/0:971:971,0:971:34304:0:0:0,-292.3,-2379.26	0/0:63:63,0:63:2236:0:0:0,-18.9649,-157.856	0/1:63:37,26:37:1328:26:917:-4.57464,0,-75.5271	0/0:604:604,0:604:21360:0:0:0,-181.822,-1507.07	0/0:79:79,0:79:2800:0:0:0,-23.7814,-193.624	0/0:141:111,30:111:3927:30:1063:0,-12.2946,-246.717	0/0:76:76,0:76:2698:0:0:0,-22.8783,-189.658	0/0:43:38,5:38:1311:5:180:0,-8.3488,-88.8053	0/0:84:74,10:74:2578:10:356:0,-15.7437,-175.838	0/1:53:26,27:26:913:27:964:-10.1392,0,-48.5069	0/0:457:457,0:457:15964:0:0:0,-137.571,-1140.74	0/0:51:37,14:37:1306:14:500:0,-0.243868,-76.6558	0/1:62:40,22:40:1404:22:792:-1.21662,0,-80.4446	0/0:977:977,0:977:34382:0:0:0,-294.106,-2443.95	0/0:47:36,11:36:1272:11:392:0,-3.25342,-78.6032	0/1:52:34,18:34:1205:18:644:-2.43453,0,-70.1574	0/0:82:66,16:66:2337:16:568:0,-8.75621,-151.188	0/0:106:106,0:106:3752:0:0:0,-31.9092,-260.677	0/0:87:75,12:75:2647:12:428:0,-14.2151,-173.316	0/1:71:38,33:38:1352:33:1152:-11.5843,0,-72.1569	0/0:426:426,0:426:15037:0:0:0,-128.239,-1061.87	0/0:74:74,0:74:2603:0:0:0,-22.2762,-185.841	0/0:86:86,0:86:3067:0:0:0,-25.8886,-215.536	0/0:130:130,0:130:4604:0:0:0,-39.1339,-326.766	0/0:68:68,0:68:2401:0:0:0,-20.47,-167.778	0/0:34:34,0:34:1203:0:0:0,-10.235,-86.1846	0/0:58:58,0:58:2013:0:0:0,-17.4597,-145.248	0/0:72:72,0:72:2530:0:0:0,-21.6742,-182.956	0/0:26:26,0:26:908:0:0:0,-7.82678,-65.29	0/0:61:61,0:61:2117:0:0:0,-18.3628,-149.618	0/0:50:50,0:50:1766:0:0:0,-15.0515,-125.871	0/0:618:618,0:618:21693:0:0:0,-186.037,-1539.56	0/1:77:34,43:34:1212:43:1514:-19.3313,0,-62.9273	0/1:42:12,30:12:428:30:1067:-16.6808,0,-18.0181	0/0:33:33,0:33:1157:0:0:0,-9.93399,-82.8525	0/0:57:57,0:57:2019:0:0:0,-17.1587,-143.977
chr12	19001856	.	CT	TT,TC	351284	PASS	AB=0.554102,0.443389;ABP=144.929,158.392;AC=149,39;AF=0.792553,0.207447;AN=188;AO=10711,2496;CIGAR=1X1M,2X;DP=13229;DPB=13324;DPRA=0,1.09641;EPP=23244.3,5423.01;EPPR=16.0391;GTI=0;LEN=1,2;MEANALT=1.68085,2.2449;MQM=58.2637,55.3918;MQMR=60;NS=94;NUMALT=2;ODDS=0.189348;PAIRED=0,0;PAIREDR=0;PAO=0.5,189.5;PQA=18,6798;PQR=0;PRO=0;QA=373959,83111;QR=216;RO=6;RPL=4996,1697;RPP=107.815,704.566;RPPR=3.0103;RPR=5715,799;RUN=1,1;SAF=4998,1697;SAP=106.652,704.566;SAR=5713,799;SRF=3;SRP=3.0103;SRR=3;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:54:0,24,30:0:0:24,30:822,968:-144.509,-77.7789,-70.5541,-67.0627,0,-58.0318	1/2:139:0,114,25:0:0:114,25:4034,837:-394.77,-66.9391,-32.6217,-327.822,0,-320.297	1/2:281:0,159,122:0:0:159,122:5501,3989:-768.155,-321.356,-273.492,-446.782,0,-410.056	1/1:290:0,288,1:0:0:288,1:9994,36:-898.626,-86.6966,0,-895.695,-83.7409,-895.393	1/2:39:0,33,6:0:0:33,6:1164,205:-111.627,-16.9182,-6.98418,-95.0512,0,-93.245	1/2:55:0,43,12:0:0:43,12:1503,402:-154.517,-32.2828,-19.3385,-122.225,0,-118.612	1/1:164:0,163,1:0:0:163,1:5685,36:-510.012,-49.0679,0,-507.081,-45.7775,-506.78	1/2:173:0,106,66:0:0:106,66:3721,2080:-468.89,-166.204,-134.295,-302.668,0,-282.8	1/1:149:0,149,0:0:0:149,0:5027,0:-451.914,-44.8535,0,-451.914,-44.8535,-451.914	1/1:111:0,111,0:0:0:111,0:3889,0:-349.527,-33.4143,0,-349.527,-33.4143,-349.527	1/1:127:0,126,1:0:0:126,1:4352,36:-390.784,-37.9298,0,-387.847,-34.6325,-387.546	1/1:118:1,117,0:1:36:117,0:4052,0:-360.87,-31.9233,0,-361.171,-35.2205,-364.108	1/1:112:0,112,0:0:0:112,0:3890,0:-350.168,-33.7154,0,-350.168,-33.7154,-350.168	1/1:176:1,175,0:1:36:175,0:6127,0:-547.028,-49.383,0,-547.329,-52.6803,-550.266	1/1:123:0,123,0:0:0:123,0:4259,0:-383.185,-37.0267,0,-383.185,-37.0267,-383.185	1/1:142:0,142,0:0:0:142,0:4925,0:-443.251,-42.7463,0,-443.251,-42.7463,-443.251	1/1:130:0,130,0:0:0:130,0:4559,0:-409.987,-39.1339,0,-409.987,-39.1339,-409.987	1/1:77:0,77,0:0:0:77,0:2680,0:-241.107,-23.1793,0,-241.107,-23.1793,-241.107	1/1:59:0,59,0:0:0:59,0:2045,0:-184.096,-17.7608,0,-184.096,-17.7608,-184.096	1/2:516:0,308,208:0:0:308,208:10858,7161:-1463.53,-580.658,-487.941,-883.22,0,-820.606	1/2:168:0,89,78:0:0:89,78:3000,2448:-439.187,-196.288,-169.497,-243.021,0,-219.54	1/2:144:0,57,87:0:0:57,87:1967,2901:-394.231,-234.476,-217.317,-160.095,0,-133.905	1/1:110:0,110,0:0:0:110,0:3847,0:-345.293,-33.1133,0,-345.293,-33.1133,-345.293	1/1:127:0,122,5:0:0:122,5:4301,158:-386.81,-36.7257,0,-374.11,-23.7092,-372.605	1/1:116:0,116,0:0:0:116,0:3993,0:-359.004,-34.9195,0,-359.004,-34.9195,-359.004	1/2:453:0,242,210:0:0:242,210:8448,7079:-1258.63,-572.34,-499.491,-686.272,0,-623.056	1/1:361:0,361,0:0:0:361,0:12574,0:-1130.71,-108.672,0,-1130.71,-108.672,-1130.71	1/1:51:0,51,0:0:0:51,0:1767,0:-159.104,-15.3525,0,-159.104,-15.3525,-159.104	1/2:360:0,181,178:0:0:181,178:6301,5854:-984.659,-472.568,-418.081,-512.07,0,-458.487	1/2:108:0,80,28:0:0:80,28:2831,901:-303.13,-72.8667,-48.7843,-230.593,0,-222.164	1/1:145:0,145,0:0:0:145,0:5089,0:-457.795,-43.6494,0,-457.795,-43.6494,-457.795	1/2:14:0,5,9:0:0:5,9:176,287:-37.6742,-23.3339,-21.8288,-14.6799,0,-11.9706	1/2:36:0,25,11:0:0:25,11:866,364:-99.8167,-29.4295,-21.9037,-70.7204,0,-67.4091	1/1:14:0,14,0:0:0:14,0:471,0:-42.6961,-4.21442,0,-42.6961,-4.21442,-42.6961	1/2:16:0,6,10:0:0:6,10:199,334:-43.2819,-27.1842,-25.3781,-16.4293,0,-13.419	1/2:24:0,18,5:0:0:18,5:630,172:-65.283,-14.0184,-8.59981,-51.3427,0,-49.8376	1/2:272:1,131,138:1:36:131,138:4614,4700:-753.016,-377.917,-341.42,-372.497,0,-333.892	1/2:125:0,97,28:0:0:97,28:3442,922:-354.435,-74.7655,-45.5656,-280.004,0,-271.575	1/1:79:0,79,0:0:0:79,0:2714,0:-243.973,-23.7814,0,-243.973,-23.7814,-243.973	1/2:6:0,3,3:0:0:3,3:100,95:-16.0482,-7.94898,-7.04589,-8.42385,0,-7.52076	1/1:255:0,255,0:0:0:255,0:8942,0:-804.148,-76.7627,0,-804.148,-76.7627,-804.148	1/1:73:0,73,0:0:0:73,0:2517,0:-226.729,-21.9752,0,-226.729,-21.9752,-226.729	1/1:153:0,153,0:0:0:153,0:5369,0:-482.866,-46.0576,0,-482.866,-46.0576,-482.866	1/1:96:0,95,1:0:0:95,1:3271,36:-294.004,-28.5979,0,-291.068,-25.3032,-290.767	1/2:102:0,48,54:0:0:48,54:1694,1838:-285.92,-148.015,-133.565,-138.251,0,-121.995	1/2:129:0,73,56:0:0:73,56:2489,1863:-352.792,-151.028,-129.053,-202.1,0,-185.242	1/1:156:0,155,0:0:0:155,0:5481,0:-492.781,-46.6597,0,-492.781,-46.6597,-492.781	1/1:213:0,213,0:0:0:213,0:7505,0:-674.618,-64.1194,0,-674.618,-64.1194,-674.618	1/1:156:0,156,0:0:0:156,0:5487,0:-493.306,-46.9607,0,-493.306,-46.9607,-493.306	1/1:269:0,269,0:0:0:269,0:9459,0:-850.941,-80.9771,0,-850.941,-80.9771,-850.941	1/2:95:0,46,48:0:0:46,48:1644,1608:-264.125,-130.156,-116.309,-133.956,0,-119.506	1/1:17:0,17,0:0:0:17,0:587,0:-53.1421,-5.11751,0,-53.1421,-5.11751,-53.1421	1/1:188:0,188,0:0:0:188,0:6545,0:-589.046,-56.5936,0,-589.046,-56.5936,-589.046	1/1:124:0,124,0:0:0:124,0:4358,0:-392.337,-37.3277,0,-392.337,-37.3277,-392.337	1/2:11:0,6,5:0:0:6,5:203,145:-27.9346,-11.4594,-9.6532,-16.4381,0,-14.933	1/1:262:0,262,0:0:0:262,0:9206,0:-827.936,-7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chr12	20202001	.	AGAA	CGAA,AGAC	132903	PASS	AB=0.361083,0.229635;ABP=3798.43,7797.22;AC=69,27;AF=0.367021,0.143617;AN=188;AO=8186,2819;CIGAR=1X3M,3M1X;DP=22653;DPB=22653;DPRA=0,27.28;EPP=17778.7,6124.39;EPPR=25200.8;GTI=6;LEN=1,1;MEANALT=1.90426,2.48889;MQM=47.1258,54.0823;MQMR=59.9881;NS=94;NUMALT=2;ODDS=0.144328;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=291803,101001;QR=410888;RO=11604;RPL=0,0;RPP=17778.7,6124.39;RPPR=25200.8;RPR=8186,2819;RUN=1,1;SAF=8186,2819;SAP=17778.7,6124.39;SAR=0,0;SRF=11604;SRP=25200.8;SRR=0;TYPE=snp,snp	GT:DP:AD:RO:QR:AO:QA:GL	0/2:118:54,22,42:54:1904:22,42:788,1508:-106.419,-59.7929,-208.194,0,-92.1447,-142.385	0/2:303:167,65,70:167:5854:65,70:2300,2512:-153.835,-20.7278,-477.519,0,-292.983,-455.294	0/2:233:101,52,79:101:3581:52,79:1860,2828:-197.644,-78.8786,-354.967,0,-142.575,-267.962	0/1:553:261,291,1:261:9242:291,1:10358,36:-756.889,0,-665.234,-832.522,-749.899,-1585.06	0/1:169:72,54,43:72:2518:54,43:1930,1544:-133.482,0,-188.587,-29.5036,-79.1894,-221.406	0/2:196:106,46,44:106:3783:46,44:1613,1580:-96.6209,-0.354957,-294.91,0,-180.234,-295.167	0/1:445:218,227,0:218:7678:227,0:8081,0:-586.815,0,-557.109,-652.439,-625.443,-1277.53	0/2:354:193,81,79:193:6808:81,79:2868,2836:-172.044,-1.67412,-531.638,0,-325.882,-530.573	0/1:309:161,148,0:161:5719:148,0:5280,0:-374.274,0,-421.813,-422.74,-466.366,-888.753	0/1:277:140,135,0:140:4920:135,0:4810,0:-346.418,0,-359.821,-388.562,-400.46,-789.025	0/1:72:37,35,0:37:1295:35,0:1256,0:-90.3749,0,-95.1731,-101.513,-105.709,-206.87	0/1:179:92,87,0:92:3265:87,0:3099,0:-221.525,0,-240.158,-249.219,-266.347,-515.214	0/1:212:109,103,0:109:3828:103,0:3676,0:-262.204,0,-280.901,-295.017,-311.907,-606.572	0/1:117:50,63,0:50:1768:63,0:2258,0:-166.571,0,-125.027,-181.623,-143.992,-325.62	0/1:202:116,86,0:116:4147:86,0:3072,0:-213.455,0,-312.605,-248.374,-338.493,-586.512	0/1:144:85,59,0:85:2991:59,0:2086,0:-141.779,0,-226.075,-167.367,-243.835,-410.853	0/1:142:74,68,0:74:2617:68,0:2422,0:-171.226,0,-193.033,-193.502,-213.503,-406.654	0/1:168:98,69,0:98:3482:69,0:2443,0:-165.238,0,-262.96,-194.739,-283.731,-478.479	0/1:84:37,47,0:37:1323:47,0:1682,0:-123.259,0,-94.0862,-134.397,-108.235,-242.277	0/1:578:276,169,131:276:9818:169,131:6048,4681:-405.135,0,-749.26,-109.269,-421.184,-869.968	0/2:429:208,98,123:208:7338:98,123:3482,4396:-293.96,-77.1979,-645.192,0,-318.12,-560.471	0/2:219:92,45,82:92:3260:45,82:1607,2944:-211.349,-109.167,-361.191,0,-135.694,-240.888	0/1:204:131,71,1:131:4654:71,1:2528,36:-164.586,0,-357.857,-201.086,-376.295,-580.021	0/1:353:207,137,9:207:7293:137,9:4862,320:-328.849,0,-552.523,-365.124,-567.727,-956.183	0/1:226:104,122,0:104:3659:122,0:4354,0:-320.1,0,-261.484,-351.407,-298.21,-649.265	0/1:955:451,268,233:451:16022:268,233:9631,8361:-644.306,0,-1224.88,-100.918,-626.406,-1336.34	0/1:681:368,312,0:368:13030:312,0:11044,0:-775.249,0,-967.47,-886.028,-1061.39,-1947.43	0/1:98:54,44,0:54:1927:44,0:1584,0:-111.939,0,-144.206,-128.195,-157.451,-285.289	0/1:573:272,155,146:272:9671:155,146:5542,5229:-367.498,0,-741.454,-24.1241,-362.86,-768.288	0/1:280:154,77,47:154:5453:77,47:2740,1684:-173.894,0,-420.992,-83.5426,-307.462,-513.569	0/1:320:148,172,0:148:5219:172,0:6082,0:-446.536,0,-373.524,-491.089,-425.301,-916.038	0/1:7:3,3,1:3:108:3,1:108,36:-7.82421,0,-7.91152,-5.8182,-5.9063,-14.331	0/2:12:7,1,4:7:239:1,4:36,144:-9.6262,-8.82484,-27.9071,0,-16.4703,-18.1772	1/1:10:0,10,0:0:0:10,0:360,0:-32.2915,-3.0103,0,-32.2915,-3.0103,-32.2915	0/1:10:7,2,1:7:235:2,1:72,36:-3.67534,0,-18.4126,-2.85192,-16.0825,-21.571	1/2:6:0,1,5:0:0:1,5:36,180:-17.8973,-15.0053,-14.7043,-3.24749,0,-1.74234	0/1:542:278,144,117:278:9888:144,117:5160,4171:-333.841,0,-762.478,-78.0166,-466.316,-848.623	0/1:333:178,79,75:178:6281:79,75:2832,2696:-175.05,0,-487.672,-9.60386,-292.424,-498.482	0/1:132:69,63,0:69:2444:63,0:2252,0:-159.75,0,-180.478,-180.521,-199.443,-379.611	0/1:4:2,2,0:2:61:2,0:72,0:-5.57282,0,-4.58941,-6.17488,-5.19147,-11.0356	0/1:284:157,127,0:157:5597:127,0:4534,0:-317.92,0,-418.362,-365.182,-456.592,-821.42	0/1:70:38,32,0:38:1357:32,0:1144,0:-81.1322,0,-101.357,-92.5714,-110.99,-203.206	0/1:314:159,155,0:159:5589:155,0:5530,0:-398.229,0,-408.62,-446.093,-455.28,-901.021	0/1:210:114,95,0:114:4048:95,0:3400,0:-240.58,0,-301.235,-274.897,-329.833,-604.735	0/2:190:105,40,45:105:3718:40,45:1423,1619:-100.021,-17.0312,-307.803,0,-188.217,-289.271	0/2:362:206,68,88:206:7306:68,88:2422,3156:-193.782,-60.3369,-635.098,0,-399.775,-568.743	0/1:328:151,177,0:151:5361:177,0:6291,0:-457.576,0,-383.889,-503.032,-437.171,-939.851	0/1:286:164,121,0:164:5774:121,0:4310,0:-298.236,0,-433.747,-347.605,-470.172,-817.665	0/1:292:145,147,0:145:5119:147,0:5260,0:-382.481,0,-372.956,-426.13,-417.208,-842.984	0/1:330:157,171,0:157:5557:171,0:6089,0:-443.991,0,-401.164,-491.252,-452.64,-943.898	0/2:577:288,115,173:288:10225:115,173:4070,6206:-418.487,-175.393,-973.909,0,-503.346,-781.06	0/1:7:3,4,0:3:108:4,0:144,0:-11.1342,0,-7.96796,-12.0373,-9.17208,-20.8504	0/1:196:53,143,0:53:1852:143,0:5098,0:-392.651,0,-107.955,-408.606,-151.002,-559.258	0/1:244:170,73,0:170:6034:73,0:2597,0:-158.567,0,-469.658,-209.742,-491.634,-701.382	0/2:25:14,2,9:14:501:2,9:72,324:-22.1524,-20.5823,-60.8342,0,-35.0723,-38.148	0/2:278:126,75,77:126:4477:75,77:2676,2764:-186.71,-9.15893,-351.398,0,-149.337,-341.64	0/1:143:72,70,1:72:2546:70,1:2510,36:-180.66,0,-186.286,-199.399,-204.423,-406.461	0/2:15:7,3,5:7:246:3,5:104,180:-12.4835,-6.16746,-25.2842,0,-11.6015,-18.5223	0/1:19:11,8,0:11:385:8,0:288,0:-20.4158,0,-29.2646,-23.7271,-31.6729,-55.0454	0/1:171:101,70,0:101:3547:70,0:2493,0:-170.082,0,-267.964,-200.486,-289.036,-489.17	0/1:246:121,70,55:121:4328:70,55:2516,1980:-166.949,0,-331.841,-42.3944,-191.935,-378.753	0/1:5:1,4,0:1:36:4,0:144,0:-11.7363,0,-2.09312,-12.0373,-3.29724,-14.9751	0/1:377:183,192,0:183:6525:192,0:6877,0:-502.412,0,-474.091,-557.5,-531.889,-1089.39	0/2:462:254,75,133:254:9045:75,133:2680,4768:-309.917,-169.908,-884.548,0,-520.748,-697.182	0/1:161:94,65,2:94:3342:65,2:2307,72:-157.39,0,-252.775,-179.821,-266.476,-451.567	0/1:141:53,44,43:53:1880:44,43:1572,1535:-110.791,0,-139.923,-2.41097,-28.8338,-142.635	0/2:421:216,96,108:216:7604:96,108:3435,3869:-248.622,-36.5454,-626.679,0,-341.933,-586.522	0/2:285:152,48,85:152:5413:48,85:1716,3042:-201.272,-107.953,-534.694,0,-302.115,-415.603	0/1:51:28,23,0:28:991:23,0:820,0:-57.5963,0,-74.1506,-66.0252,-81.0743,-146.747	0/2:281:149,56,76:149:5310:56,76:2000,2728:-177.055,-61.3406,-477.309,0,-272.261,-409.952	0/2:206:102,43,59:102:3606:43,59:1536,2116:-140.949,-47.6295,-328.371,0,-169.662,-275.927	0/1:38:10,28,0:10:360:28,0:984,0:-76.364,0,-21.3052,-79.3743,-29.734,-108.752	0/2:341:204,64,73:204:7159:64,73:2276,2600:-149.032,-27.9679,-591.322,0,-400.147,-560.647	0/1:220:101,61,58:101:3568:61,58:2156,2084:-142.342,0,-272.209,-3.64393,-121.473,-276.761	0/2:391:214,85,91:214:7545:85,91:3008,3262:-199.957,-22.5082,-611.247,0,-372.459,-586.937	0/1:323:177,145,0:177:6310:145,0:5168,0:-363.2,0,-470.708,-416.483,-514.357,-930.842	0/2:229:117,39,73:117:4137:39,73:1396,2601:-175.504,-98.891,-424.093,0,-225.11,-314.968	0/2:239:120,56,62:120:4221:56,62:1995,2205:-142.869,-19.3269,-346.067,0,-183.934,-324.937	0/2:18:6,4,8:6:206:4,8:144,288:-21.6307,-11.8677,-27.3835,0,-5.14441,-14.3114	0/1:245:125,120,0:125:4420:120,0:4268,0:-306.354,0,-324.224,-343.983,-360.348,-703.978	0/1:294:150,77,67:150:5269:77,67:2726,2400:-172.554,0,-405.665,-22.9304,-234.069,-431.612	0/1:704:407,296,0:407:14426:296,0:10555,0:-727.985,0,-1086.13,-850.504,-1175.23,-2025.74	0/1:263:136,127,0:136:4784:127,0:4562,0:-327.619,0,-351.061,-368.559,-389.292,-757.498	0/1:163:72,91,0:72:2565:91,0:3256,0:-241.434,0,-182.032,-263.108,-209.426,-472.179	0/1:230:117,113,0:117:4153:113,0:4054,0:-292.552,0,-304.719,-327.772,-338.736,-666.153	0/1:370:168,201,0:168:6005:201,0:7130,0:-524.248,0,-429.116,-574.821,-489.624,-1064.45	0/1:97:57,40,0:57:2014:40,0:1428,0:-97.9229,0,-152.332,-115.082,-164.373,-279.103	0/1:155:76,79,0:76:2704:79,0:2803,0:-201.88,0,-196.944,-224.759,-220.726,-445.132	0/1:157:77,80,0:77:2743:80,0:2864,0:-206.202,0,-199.851,-229.381,-223.933,-452.961	0/1:55:26,26,0:26:908:26,0:914,0:-65.3466,0,-66.0341,-73.1733,-73.8609,-147.032	0/2:151:87,26,38:87:3092:26,38:936,1360:-84.3081,-34.894,-279.031,0,-176.359,-240.524	0/2:173:88,27,57:88:3125:27,57:968,2048:-140.205,-88.2378,-334.74,0,-176.173,-237.473	0/1:243:124,119,0:124:4370:119,0:4233,0:-304.03,0,-320.328,-341.357,-356.151,-697.156	0/1:328:171,157,0:171:6054:157,0:5607,0:-400.737,0,-446.23,-452.213,-493.492,-945.351
chr12	20202026	.	GAC	GAA,AGA,AAA	406675	PASS	AB=0.503316,0.367453,0.225832;ABP=5.17025,3455.72,8283.12;AC=92,69,27;AF=0.489362,0.367021,0.143617;AN=188;AO=11385,8324,2864;CIGAR=2M1X,3X,1X1M1X;DP=22636;DPB=22636;DPRA=24.587,0,26.983;EPP=23668.4,17526.7,5947.26;EPPR=11.6962;GTI=6;LEN=1,3,3;MEANALT=3.04348,3.01064,3.55319;MQM=59.9924,47.0758,53.9885;MQMR=60;NS=94;NUMALT=3;ODDS=2.15919;PAIRED=0,0,0;PAIREDR=0;PAO=0,0,0;PQA=0,0,0;PQR=0;PRO=0;QA=406370,294671,102101;QR=138;RO=4;RPL=123,64,32;RPP=23668.4,17526.7,5947.26;RPPR=11.6962;RPR=11262,8260,2832;RUN=1,1,1;SAF=11385,8324,2864;SAP=24725.2,18078.3,6222.11;SAR=0,0,0;SRF=4;SRP=11.6962;SRR=0;TYPE=snp,mnp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/3:121:0,53,23,45:0:0:53,23,45:1904,798,1595:-284.941,-129.613,-113.658,-221.559,-66.232,-214.635,-155.338,0,-91.9579,-141.791	1/3:300:0,163,63,73:0:0:163,63,73:5828,2251,2610:-686.279,-211.068,-162,-507.678,-32.4668,-488.713,-475.216,0,-296.615,-453.24	1/3:232:0,101,52,79:0:0:101,52,79:3601,1852,2826:-521.497,-227.96,-197.556,-372.95,-79.413,-357.296,-293.539,0,-144.993,-269.758	1/2:557:0,256,298,1:0:0:256,298,1:9135,10543,36:-1592.96,-848.257,-771.193,-744.742,0,-655.035,-1590.03,-845.322,-741.806,-1589.73	1/2:167:0,67,54,44:0:0:67,54,44:2400,1927,1576:-350.591,-154.86,-134.691,-195.73,0,-179.475,-222.361,-26.6279,-67.5006,-209.115	1/3:196:0,105,46,45:0:0:105,46,45:3729,1617,1614:-435.132,-131.28,-99.6716,-308.327,-4.47974,-294.479,-303.859,0,-177.055,-290.313	1/2:443:0,215,228,0:0:0:215,228,0:7653,8063,0:-1273.55,-649.816,-585.095,-624.087,0,-555.452,-1273.55,-649.816,-624.087,-1273.55	1/3:351:0,189,81,80:0:0:189,81,80:6750,2875,2858:-782.221,-231.896,-175.001,-553.938,-3.61518,-529.555,-550.329,0,-322.047,-526.247	1/2:306:0,156,149,0:0:0:156,149,0:5570,5261,0:-873.544,-419.431,-372.471,-454.11,0,-409.256,-873.544,-419.431,-454.11,-873.544	1/2:274:0,134,139,0:0:0:134,139,0:4787,4874,0:-783.6,-393.306,-352.968,-390.309,0,-348.465,-783.6,-393.306,-390.309,-783.6	1/2:71:0,35,36,0:0:0:35,36,0:1260,1288,0:-206.76,-103.948,-93.4115,-103.169,0,-92.3324,-206.76,-103.948,-103.169,-206.76	1/2:180:0,90,90,0:0:0:90,90,0:3230,3179,0:-518.444,-254.998,-227.906,-263.799,0,-236.706,-518.444,-254.998,-263.799,-518.444	1/2:210:0,105,105,0:0:0:105,105,0:3768,3712,0:-604.361,-297.004,-265.396,-307.71,0,-276.102,-604.361,-297.004,-307.71,-604.361	1/2:116:0,50,66,0:0:0:50,66,0:1784,2336,0:-333.436,-188,-172.948,-145.79,0,-125.922,-333.436,-188,-145.79,-333.436	1/2:202:0,115,86,0:0:0:115,86,0:4115,3068,0:-582.435,-246.873,-212.255,-335.577,0,-309.688,-582.435,-246.873,-335.577,-582.435	1/2:142:0,82,59,0:0:0:82,59,0:2948,2068,0:-405.427,-164.909,-140.225,-240.509,0,-222.748,-405.427,-164.909,-240.509,-405.427	1/2:142:0,72,70,0:0:0:72,70,0:2572,2486,0:-407.753,-198.049,-176.375,-210.056,0,-188.984,-407.753,-198.049,-210.056,-407.753	1/2:170:0,98,72,0:0:0:98,72,0:3496,2543,0:-487.667,-202.668,-173.167,-285.35,0,-263.676,-487.667,-202.668,-285.35,-487.667	1/2:84:0,37,47,0:0:0:37,47,0:1316,1678,0:-241.036,-133.785,-122.647,-107.604,0,-93.4553,-241.036,-133.785,-107.604,-241.036	1/2:575:0,272,169,133:0:0:272,169,133:9736,5999,4732:-1275.79,-481.841,-399.961,-793.954,0,-743.08,-893.022,-99.0661,-411.182,-852.985	1/3:432:0,203,104,124:0:0:203,104,124:7233,3658,4447:-950.263,-360.707,-299.598,-657.926,-68.3723,-626.618,-589.56,0,-297.224,-552.233	1/3:218:0,90,46,82:0:0:90,46,82:3216,1631,2927:-499.637,-237.422,-210.329,-368.61,-106.396,-354.763,-262.218,0,-131.193,-237.533	1/2:202:0,130,70,1:0:0:130,70,1:4648,2447,36:-576.257,-197.258,-158.124,-378.991,0,-357.919,-573.322,-194.323,-376.056,-573.021	1/2:352:0,202,141,9:0:0:202,141,9:7162,5005,317:-984.936,-401.453,-340.645,-583.484,0,-541.038,-959.168,-375.684,-557.715,-956.458	1/2:230:0,104,125,0:0:0:104,125,0:3692,4385,0:-653.71,-352.886,-321.579,-300.895,0,-263.267,-653.71,-352.886,-300.895,-653.71	1/2:955:0,450,268,237:0:0:450,268,237:16006,9513,8451:-2074.63,-770.218,-634.754,-1304.41,0,-1223.74,-1388.15,-83.7391,-617.935,-1316.81	1/2:679:0,359,320,0:0:0:359,320,0:12810,11292,0:-1947.66,-903.361,-795.291,-1044.65,0,-948.323,-1947.66,-903.361,-1044.65,-1947.66	1/2:99:1,53,45,0:1:36:53,45,0:1896,1581,0:-278.73,-124.42,-111.403,-151.666,0,-141.057,-279.031,-127.357,-154.604,-281.968	1/2:569:0,265,154,146:0:0:265,154,146:9476,5473,5192:-1214.87,-442.2,-362.427,-772.672,0,-726.313,-792.83,-20.1569,-350.631,-748.88	1/2:280:0,153,80,47:0:0:153,80,47:5464,2831,1670:-672.682,-227.211,-181.153,-445.471,0,-421.388,-537.239,-91.7653,-310.027,-523.09	1/2:321:0,142,178,0:0:0:142,178,0:5084,6251,0:-918.159,-503.555,-460.808,-414.687,0,-361.104,-918.159,-503.555,-414.687,-918.159	1/2:6:0,2,3,1:0:0:2,3,1:72,106,36:-14.4308,-8.55336,-7.9513,-5.87693,0,-4.97384,-11.5213,-5.6427,-2.96888,-11.2203	1/3:12:0,7,1,4:0:0:7,1,4:248,36,144:-31.9335,-11.7334,-9.6262,-29.0244,-8.82484,-28.7234,-20.2006,0,-17.2912,-18.9965	2/2:10:0,0,10,0:0:0:0,10,0:0,360,0:-32.2915,-32.2915,-32.2915,-3.0103,-3.0103,0,-32.2915,-32.2915,-3.0103,-32.2915	1/2:11:0,8,2,1:0: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chr12	20202083	.	GT	AT,AC	558217	PASS	AB=0.736154,0.262721;ABP=5600.76,5654.22;AC=147,41;AF=0.781915,0.218085;AN=188;AO=22452,3052;CIGAR=1X1M,2X;DP=25531;DPB=25531;DPRA=0,1.1932;EPP=47926.6,6595.65;EPPR=26.8965;GTI=9;LEN=1,2;MEANALT=1.69149,2.22449;MQM=59.9859,59.9371;MQMR=60;NS=94;NUMALT=2;ODDS=19.1369;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=804176,107695;QR=381;RO=11;RPL=22358,3048;RPP=47943.9,6595.65;RPPR=26.8965;RPR=94,4;RUN=1,1;SAF=2,0;SAP=48739.5,6630.34;SAR=22450,3052;SRF=0;SRP=26.8965;SRR=11;TYPE=snp,mnp	GT:DP:AD:RO:QR:AO:QA:GL	1/2:63:0,39,24:0:0:39,24:1381,836:-180.825,-68.3288,-56.5886,-112.847,0,-105.622	1/2:430:0,336,94:0:0:336,94:12057,3339:-1255.67,-272.194,-171.048,-983.828,0,-955.531	1/2:341:0,236,104:0:0:236,104:8462,3692:-990.853,-300.943,-229.9,-690.035,0,-658.728	1/1:744:0,743,0:0:0:743,0:26613,0:-2394.15,-223.665,0,-2394.15,-223.665,-2394.15	1/2:232:0,190,41:0:0:190,41:6798,1457:-673.06,-118.723,-61.5276,-554.333,0,-541.991	1/2:167:0,123,43:0:0:123,43:4378,1533:-481.764,-124.958,-87.9309,-356.803,0,-343.858	1/1:283:0,283,0:0:0:283,0:10116,0:-910.369,-85.1915,0,-910.369,-85.1915,-910.369	1/2:443:0,318,125:0:0:318,125:11353,4381:-1282.18,-356.607,-260.88,-925.923,0,-888.294	1/1:227:0,227,0:0:0:227,0:8090,0:-728.109,-68.3338,0,-728.109,-68.3338,-728.109	1/1:328:0,328,0:0:0:328,0:11760,0:-1058.26,-98.7378,0,-1058.26,-98.7378,-1058.26	1/1:241:0,240,0:0:0:240,0:8607,0:-774.303,-72.2472,0,-774.303,-72.2472,-774.303	1/1:175:0,174,1:0:0:174,1:6239,36:-561.244,-52.3792,0,-558.306,-49.082,-558.005	1/1:209:1,208,0:1:36:208,0:7441,0:-666.133,-59.317,0,-666.434,-62.6142,-669.372	1/1:264:0,264,0:0:0:264,0:9488,0:-853.873,-79.4719,0,-853.873,-79.4719,-853.873	1/1:172:0,172,0:0:0:172,0:6180,0:-556.295,-51.7772,0,-556.295,-51.7772,-556.295	1/1:185:0,185,0:0:0:185,0:6618,0:-595.691,-55.6906,0,-595.691,-55.6906,-595.691	1/1:251:0,251,0:0:0:251,0:8979,0:-808.088,-75.5585,0,-808.088,-75.5585,-808.088	1/1:201:0,201,0:0:0:201,0:7215,0:-649.401,-60.507,0,-649.401,-60.507,-649.401	1/1:143:0,143,0:0:0:143,0:5136,0:-462.38,-43.0473,0,-462.38,-43.0473,-462.38	1/2:243:0,172,71:0:0:172,71:6168,2523:-709.03,-205.948,-154.171,-503.438,0,-482.065	1/2:375:0,278,97:0:0:278,97:9923,3425:-1087.86,-278.893,-195.207,-809.324,0,-780.124	1/2:77:0,62,15:0:0:62,15:2228,528:-225.102,-43.3358,-24.6719,-182.12,0,-177.605	1/1:298:0,298,0:0:0:298,0:10657,0:-958.93,-89.7069,0,-958.93,-89.7069,-958.93	1/1:402:0,400,2:0:0:400,2:14325,72:-1288.64,-120.412,0,-1282.76,-114.177,-1282.16	1/1:132:0,132,0:0:0:132,0:4720,0:-424.96,-39.736,0,-424.96,-39.736,-424.96	1/2:1037:0,749,288:0:0:749,288:26876,10130:-3017.11,-824.886,-599.415,-2192.57,0,-2105.88	1/1:491:0,490,1:0:0:490,1:17560,36:-1579.65,-147.505,0,-1576.71,-144.207,-1576.41	1/1:89:0,89,0:0:0:89,0:3185,0:-286.872,-26.7917,0,-286.872,-26.7917,-286.872	1/2:515:0,374,140:0:0:374,140:13352,4924:-1489.49,-400.957,-288.372,-1088.68,0,-1046.53	1/2:403:0,313,90:0:0:313,90:11192,3193:-1172.98,-260.5,-166.278,-912.833,0,-885.74	1/1:421:0,420,1:0:0:420,1:15015,34:-1350.72,-126.433,0,-1347.96,-123.335,-1347.66	1/2:24:0,21,3:0:0:21,3:756,95:-69.6844,-7.96082,-1.63919,-62.0456,0,-61.1425	1/2:40:0,29,11:0:0:29,11:1040,370:-115.153,-30.3113,-21.5814,-85.1845,0,-81.8732	1/1:12:0,12,0:0:0:12,0:432,0:-39.2212,-3.61236,0,-39.2212,-3.61236,-39.2212	1/2:14:0,10,4:0:0:10,4:360,144:-41.4837,-12.1095,-9.0992,-29.734,0,-28.5299	1/2:29:0,25,4:0:0:25,4:900,144:-85.5449,-12.1095,-4.58375,-73.7953,0,-72.5911	1/2:431:0,304,127:0:0:304,127:10912,4470:-1254.34,-364.234,-272.721,-890.461,0,-852.23	1/2:469:0,335,134:0:0:335,134:11995,4735:-1364.17,-385.971,-285.126,-978.556,0,-938.218	1/1:261:0,261,0:0:0:261,0:9342,0:-840.669,-78.5688,0,-840.669,-78.5688,-840.669	1/2:4:0,2,2:0:0:2,2:72,61:-11.0935,-5.19117,-4.58911,-6.23466,0,-5.6326	1/1:445:0,445,0:0:0:445,0:15906,0:-1431.23,-133.958,0,-1431.23,-133.958,-1431.23	1/1:114:0,114,0:0:0:114,0:4100,0:-369.183,-34.3174,0,-369.183,-34.3174,-369.183	1/1:306:0,306,0:0:0:306,0:10953,0:-985.661,-92.1152,0,-985.661,-92.1152,-985.661	1/1:193:0,193,0:0:0:193,0:6909,0:-621.875,-58.0988,0,-621.875,-58.0988,-621.875	1/2:128:0,98,30:0:0:98,30:3503,1047:-371.135,-85.507,-56.0061,-285.979,0,-276.948	1/2:212:0,144,68:0:0:144,68:5139,2397:-614.43,-195.51,-152.162,-419.274,0,-398.804	1/1:323:0,320,3:0:0:320,3:11455,108:-1030.46,-96.3296,0,-1021.65,-87.1575,-1020.75	1/1:517:1,515,0:1:25:515,0:18407,0:-1653.73,-153.062,0,-1654.03,-155.03,-1655.98	1/1:191:1,190,0:1:36:190,0:6812,0:-609.552,-53.8985,0,-609.853,-57.1957,-612.79	1/1:514:2,512,0:2:70:512,0:18330,0:-1642.63,-148.082,0,-1643.24,-154.127,-1648.93	1/2:278:0,190,88:0:0:190,88:6828,3089:-808.785,-251.747,-194.552,-557.391,0,-530.901	1/1:43:0,43,0:0:0:43,0:1544,0:-139.253,-12.9443,0,-139.253,-12.9443,-139.253	1/1:445:0,444,0:0:0:444,0:15909,0:-1431.13,-133.657,0,-1431.13,-133.657,-1431.13	1/1:153:0,153,0:0:0:153,0:5500,0:-495.124,-46.0576,0,-495.124,-46.0576,-495.124	1/2:31:0,25,6:0:0:25,6:900,216:-91.4198,-17.9843,-10.4586,-73.7953,0,-71.9891	1/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chr12	20249811	.	AGCA	CGCA,CGCG	590402	PASS	AB=0.48384,0.511493;ABP=28.7675,16.0374;AC=146,42;AF=0.776596,0.223404;AN=188;AO=16082,5849;CIGAR=1X3M,1X2M1X;DP=22033;DPB=22064.2;DPRA=0,1.68186;EPP=34924.6,12704;EPPR=46.4397;GTI=2;LEN=1,4;MEANALT=2.38298,2.94643;MQM=59.9965,59.974;MQMR=60;NS=94;NUMALT=2;ODDS=2.86386;PAIRED=0,0;PAIREDR=0;PAO=62,63;PQA=2200.5,2236.5;PQR=0;PRO=0;QA=568102,203026;QR=624;RO=20;RPL=7455,2630;RPP=188.479,131.807;RPPR=6.91895;RPR=8627,3219;RUN=1,1;SAF=7455,2630;SAP=188.479,131.807;SAR=8627,3219;SRF=7;SRP=6.91895;SRR=13;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/2:147:0,50,97:0:0:50,97:1763,3343:-415.443,-271.892,-256.841,-143.901,0,-114.701	1/2:383:0,210,169:0:0:210,169:7456,5865:-1084.34,-476.819,-413.602,-607.59,0,-556.716	1/2:327:1,191,135:1:34:191,135:6748,4706:-929.226,-379.974,-325.235,-546.806,0,-508.925	1/1:452:1,447,2:1:36:447,2:15880,71:-1425.29,-131.626,0,-1419.81,-128.785,-1422.14	1/2:210:0,97,113:0:0:97,113:3421,3938:-598.735,-320.182,-290.982,-278.485,0,-244.468	1/2:133:0,59,74:0:0:59,74:2108,2587:-382.618,-210.744,-192.983,-172.169,0,-149.893	1/1:198:1,197,0:1:36:197,0:6962,0:-623.053,-56.0057,0,-623.354,-59.3029,-626.291	1/2:501:0,226,273:0:0:226,273:7985,9406:-1414.3,-764.005,-695.972,-650.349,0,-568.168	1/1:247:1,246,0:1:35:246,0:8698,0:-779.323,-70.8558,0,-779.624,-74.0534,-782.472	1/1:205:0,205,0:0:0:205,0:7234,0:-651.119,-61.7112,0,-651.119,-61.7112,-651.119	1/1:173:0,171,0:0:0:171,0:6044,0:-543.62,-51.4761,0,-543.62,-51.4761,-543.62	1/1:211:0,210,0:0:0:210,0:7383,0:-664.276,-63.2163,0,-664.276,-63.2163,-664.276	1/1:147:0,147,0:0:0:147,0:5107,0:-459.718,-44.2514,0,-459.718,-44.2514,-459.718	1/1:168:0,167,0:0:0:167,0:5866,0:-527.807,-50.272,0,-527.807,-50.272,-527.807	1/1:158:0,158,0:0:0:158,0:5593,0:-503.376,-47.5627,0,-503.376,-47.5627,-503.376	1/1:140:0,139,0:0:0:139,0:4904,0:-441.155,-41.8432,0,-441.155,-41.8432,-441.155	1/1:129:0,129,0:0:0:129,0:4570,0:-411.467,-38.8329,0,-411.467,-38.8329,-411.467	1/1:106:0,106,0:0:0:106,0:3728,0:-335.722,-31.9092,0,-335.722,-31.9092,-335.722	1/1:85:0,85,0:0:0:85,0:3008,0:-270.951,-25.5876,0,-270.951,-25.5876,-270.951	1/2:410:0,221,186:0:0:221,186:7863,6479:-1167.73,-526.913,-460.385,-640.866,0,-584.874	1/2:377:0,184,192:0:0:184,192:6507,6636:-1069.23,-539.251,-483.862,-530.04,0,-472.243	1/2:265:1,68,195:1:25:68,195:2407,6761:-743.45,-547.686,-529.164,-194.217,0,-137.463	1/1:326:0,321,2:0:0:321,2:11347,70:-1020.77,-96.6306,0,-1015.08,-90.9381,-1014.48	1/1:238:0,220,18:0:0:220,18:7749,616:-697.104,-66.2266,0,-647.106,-15.9422,-641.687	1/1:208:0,207,1:0:0:207,1:7287,36:-655.527,-62.3132,0,-652.589,-59.016,-652.288	1/2:758:1,354,400:1:35:354,400:12539,13853:-2143.93,-1122.79,-1019.07,-1018.58,0,-901.018	1/1:549:0,546,0:0:0:546,0:19308,0:-1736.93,-164.362,0,-1736.93,-164.362,-1736.93	1/1:65:0,65,0:0:0:65,0:2274,0:-204.92,-19.567,0,-204.92,-19.567,-204.92	1/2:550:0,265,283:0:0:265,283:9381,9885:-1568.24,-804.103,-724.33,-764.167,0,-678.975	1/2:360:0,171,188:0:0:171,188:5998,6577:-1023.33,-535.217,-483.741,-488.247,0,-431.653	1/1:238:0,234,2:0:0:234,2:8261,72:-743.16,-70.441,0,-737.285,-64.5537,-736.683	1/2:16:0,6,10:0:0:6,10:216,356:-46.9971,-29.3711,-27.5649,-17.9843,0,-14.974	1/2:35:0,13,22:0:0:13,22:464,769:-100.68,-62.8506,-58.9372,-38.1286,0,-31.5059	1/1:8:0,8,0:0:0:8,0:273,0:-24.9002,-2.40824,0,-24.9002,-2.40824,-24.9002	1/2:28:0,14,14:0:0:14,14:504,477:-80.1739,-39.0405,-34.826,-41.4837,0,-37.2693	1/2:49:0,19,30:0:0:19,30:669,1017:-137.27,-82.8024,-77.0828,-54.8144,0,-45.7835	1/2:471:0,238,233:0:0:238,233:8442,8113:-1347.68,-659.894,-588.249,-687.963,0,-617.823	1/2:449:0,245,202:0:0:245,202:8674,7028:-1278.05,-571.487,-497.735,-706.603,0,-645.795	1/1:98:0,98,0:0:0:98,0:3417,0:-307.685,-29.5009,0,-307.685,-29.5009,-307.685	1/2:7:0,3,4:0:0:3,4:108,128:-19.4622,-10.6328,-9.72973,-9.17208,0,-7.96796	1/1:347:2,340,0:2:57:340,0:12015,0:-1075.82,-97.8147,0,-1076.42,-102.35,-1080.95	1/1:78:0,78,0:0:0:78,0:2776,0:-250.082,-23.4803,0,-250.082,-23.4803,-250.082	1/1:387:0,386,1:0:0:386,1:13617,36:-1224.97,-116.198,0,-1222.03,-112.9,-1221.73	1/1:143:1,142,0:1:24:142,0:4980,0:-445.771,-40.6474,0,-446.072,-42.7463,-447.93	1/2:136:0,60,76:0:0:60,76:2077,2629:-382.768,-213.981,-195.919,-169.133,0,-146.255	1/2:243:0,106,137:0:0:106,137:3757,4753:-692.773,-386.702,-354.793,-306.422,0,-265.181	1/1:318:0,317,0:0:0:317,0:11179,0:-1005.76,-95.4265,0,-1005.76,-95.4265,-1005.76	1/1:532:1,523,4:1:29:523,4:18369,142:-1649.86,-155.139,0,-1638.59,-145.872,-1639.69	1/1:259:0,258,1:0:0:258,1:9062,36:-815.192,-77.6657,0,-812.254,-74.3685,-811.953	1/1:294:0,293,0:0:0:293,0:10342,0:-930.464,-88.2018,0,-930.464,-88.2018,-930.464	1/2:363:0,159,203:0:0:159,203:5618,7055:-1031.09,-573.561,-525.697,-457.523,0,-396.414	1/1:27:0,27,0:0:0:27,0:940,0:-84.9102,-8.12781,0,-84.9102,-8.12781,-84.9102	1/1:316:0,316,0:0:0:316,0:11198,0:-1007.71,-95.1255,0,-1007.71,-95.1255,-1007.71	1/1:92:0,91,1:0:0:91,1:3242,36:-291.641,-27.3937,0,-288.704,-24.0965,-288.403	1/2:47:0,27,20:0:0:27,20:932,681:-131.247,-55.5287,-47.4009,-76.0041,0,-69.9835	1/2:325:0,171,152:0:0:171,152:6084,5307:-927.548,-431.711,-380.235,-495.879,0,-450.122	1/1:129:0,128,0:0:0:128,0:4514,0:-406.071,-38.5318,0,-406.071,-38.5318,-406.071	1/2:52:0,37,15:0:0:37,15:1324,535:-151.936,-43.9692,-32.8311,-108.324,0,-103.809	1/1:41:0,41,0:0:0:41,0:1459,0:-131.605,-12.3422,0,-131.605,-12.3422,-131.605	1/1:187:0,187,0:0:0:187,0:6584,0:-592.583,-56.2926,0,-592.583,-56.2926,-592.583	1/2:219:0,97,122:0:0:97,122:3434,4224:-623.081,-343.357,-314.157,-279.837,0,-243.112	1/1:21:0,21,0:0:0:21,0:752,0:-68.0063,-6.32163,0,-68.0063,-6.32163,-68.0063	1/1:431:0,429,2:0:0:429,2:15209,65:-1368.15,-129.142,0,-1362.91,-123.631,-1362.3	1/2:585:0,331,253:0:0:331,253:11696,8771:-1665.53,-713.005,-613.364,-952.636,0,-876.475	1/2:197:1,176,20:1:29:176,20:6257,699:-564.208,-54.6143,-3.93887,-507.646,0,-503.934	1/2:202:1,98,101:1:36:98,101:3462,3488:-562.175,-280.53,-253.966,-279.09,0,-251.624	1/2:517:0,233,282:0:0:233,282:8211,9677:-1454.19,-785.67,-715.53,-668.506,0,-583.616	1/2:274:0,96,176:0:0:96,176:3417,6137:-777.679,-499.188,-470.289,-278.568,0,-225.587	1/1:83:0,82,0:0:0:82,0:2912,0:-261.955,-24.6845,0,-261.955,-24.6845,-261.955	1/2:189:1,93,94:1:36:93,94:3246,3252:-525.063,-261.346,-236.288,-261.103,0,-235.743	1/2:132:0,57,75:0:0:57,75:2004,2626:-377.134,-214.012,-196.853,-163.473,0,-140.895	1/1:63:0,62,0:0:0:62,0:2185,0:-196.555,-18.6639,0,-196.555,-18.6639,-196.555	1/2:340:0,166,172:0:0:166,172:5872,5963:-963.004,-484.73,-434.759,-478.339,0,-426.562	1/2:237:0,126,109:0:0:126,109:4450,3755:-667.453,-305.058,-267.128,-362.457,0,-329.645	1/2:423:0,215,203:0:0:215,203:7561,7025:-1186.4,-570.934,-506.212,-615.521,0,-554.412	1/1:370:1,367,1:1:33:367,1:13003,29:-1166.78,-107.818,0,-1164.77,-108.198,-1167.14	1/2:341:2,145,192:2:69:145,192:5105,6673:-951.906,-536.911,-498.867,-409.989,0,-357.797	1/2:309:0,147,162:0:0:147,162:5241,5688:-890.504,-463.282,-419.03,-427.576,0,-378.81	1/2:30:0,9,21:0:0:9,21:320,735:-86.2289,-60.1496,-57.4403,-26.4331,0,-20.1115	1/1:235:1,234,0:1:24:234,0:8264,0:-741.373,-68.3422,0,-741.674,-70.441,-743.533	1/2:271:1,131,137:1:25:131,137:4589,4757:-757.918,-384.824,-347.337,-371.507,0,-332.214	1/1:471:1,466,3:1:36:466,3:16579,108:-1488.2,-137.338,0,-1479.69,-131.438,-1481.72	1/1:167:1,163,1:1:25:163,1:5751,34:-515.155,-47.1374,0,-512.698,-46.2983,-514.346	1/1:148:0,148,0:0:0:148,0:5248,0:-472.402,-44.5524,0,-472.402,-44.5524,-472.402	1/1:153:0,152,0:0:0:152,0:5347,0:-481.118,-45.7566,0,-481.118,-45.7566,-481.118	1/1:331:0,330,0:0:0:330,0:11677,0:-1050.15,-99.3399,0,-1050.15,-99.3399,-1050.15	1/1:58:0,58,0:0:0:58,0:2051,0:-184.86,-17.4597,0,-184.86,-17.4597,-184.86	1/1:185:0,185,0:0:0:185,0:6512,0:-586.169,-55.6906,0,-586.169,-55.6906,-586.169	1/1:147:0,146,0:0:0:146,0:5125,0:-460.976,-43.9504,0,-460.976,-43.9504,-460.976	1/1:125:0,124,0:0:0:124,0:4370,0:-393.185,-37.3277,0,-393.185,-37.3277,-393.185	1/2:256:0,118,138:0:0:118,138:4212,4759:-730.309,-386.929,-351.407,-343.732,0,-302.189	1/2:191:0,62,128:0:0:62,128:2199,4490:-544.545,-365.387,-346.723,-179.152,0,-140.62	1/1:173:0,171,2:0:0:171,2:5995,72:-536.945,-51.4761,0,-531.071,-47.6187,-530.469	1/1:218:0,217,0:0:0:217,0:7631,0:-686.415,-65.3235,0,-686.415,-65.3235,-686.415
chr12	20321402	.	TGCCA	CGCCG	49888.2	PASS	AB=0.524027;ABP=31.4978;AC=41;AF=0.218085;AN=188;AO=2985;CIGAR=1X3M1X;DP=11066;DPB=11066;DPRA=1.48417;EPP=6484.86;EPPR=17403;GTI=4;LEN=5;MEANALT=1.97778;MQM=59.7152;MQMR=59.9854;NS=94;NUMALT=1;ODDS=0.836038;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105450;QR=283510;RO=8013;RPL=0;RPP=6484.86;RPPR=17403;RPR=2985;RUN=1;SAF=2985;SAP=6484.86;SAR=0;SRF=8013;SRP=17403;SRR=0;TYPE=complex	GT:DP:AD:RO:QR:AO:QA:GL	0/1:68:37,31:37:1322:31:1093:-78.1838,0,-98.8123	0/1:179:88,89:88:3109:89:3152:-230.325,0,-226.457	0/1:263:94,166:94:3292:166:5882:-450.852,0,-217.891	0/0:443:441,0:441:15641:0:0:0,-132.754,-1407.05	0/1:86:50,36:50:1770:36:1241:-86.1006,0,-133.694	0/1:46:27,19:27:972:19:656:-45.5144,0,-73.9505	0/0:89:89,0:89:3154:0:0:0,-26.7917,-284.087	0/1:217:106,110:106:3746:110:3883:-284.024,0,-271.961	0/0:137:137,0:137:4826:0:0:0,-41.2411,-434.499	0/0:118:117,0:117:4105:0:0:0,-35.2205,-369.281	0/0:23:23,0:23:803:0:0:0,-6.92369,-72.5862	0/0:67:67,0:67:2345:0:0:0,-20.169,-211.308	0/0:71:71,0:71:2527:0:0:0,-21.3731,-227.682	0/0:44:44,0:44:1552:0:0:0,-13.2453,-139.971	0/0:59:59,0:59:2103:0:0:0,-17.7608,-189.54	0/0:47:47,0:47:1676:0:0:0,-14.1484,-151.127	0/0:47:46,0:46:1630:0:0:0,-13.8474,-146.628	0/0:44:44,0:44:1564:0:0:0,-13.2453,-141.052	0/0:30:30,0:30:1056:0:0:0,-9.0309,-95.3494	0/1:307:127,179:127:4496:179:6327:-477.088,0,-312.389	0/1:220:112,105:112:3945:105:3705:-267.964,0,-289.564	0/1:209:68,141:68:2398:141:5000:-387.226,0,-153.162	0/0:85:83,1:83:2962:1:36:0,-22.0481,-263.216	0/0:140:134,5:134:4745:5:178:0,-25.8336,-410.843	0/0:115:115,0:115:4059:0:0:0,-34.6184,-365.501	0/1:395:177,217:177:6222:217:7670:-571.298,0,-441.12	0/0:241:240,0:240:8469:0:0:0,-72.2472,-761.864	0/0:28:28,0:28:981:0:0:0,-8.42884,-88.6012	0/1:495:227,266:227:8049:266:9412:-698.325,0,-575.736	0/1:68:36,31:36:1276:31:1098:-78.6321,0,-94.6629	0/0:158:157,0:157:5552:0:0:0,-47.2617,-499.451	0/1:10:2,8:2:72:8:286:-23.0752,0,-3.82642	0/1:14:10,4:10:357:4:143:-9.00703,0,-28.2578	0/0:8:8,0:8:275:0:0:0,-2.40824,-25.0838	0/1:6:3,3:3:105:3:106:-8.08292,0,-7.98979	0/0:11:11,0:11:384:0:0:0,-3.31133,-34.8941	0/1:124:65,59:65:2295:59:2096:-151.581,0,-169.483	0/1:296:135,155:135:4736:155:5478:-405.458,0,-338.77	0/0:51:50,0:50:1787:0:0:0,-15.0515,-160.752	0/1:6:5,1:5:175:1:36:-1.79209,0,-14.287	0/0:281:281,0:281:9972:0:0:0,-84.5894,-897.43	0/0:38:38,0:38:1361:0:0:0,-11.4391,-122.791	0/0:144:144,0:144:5094:0:0:0,-43.3483,-458.609	0/0:42:42,0:42:1488:0:0:0,-12.6433,-134.213	0/1:45:26,19:26:916:19:673:-47.3496,0,-69.209	0/1:128:69,56:69:2435:56:1986:-140.997,0,-181.446	0/0:227:223,1:223:7859:1:36:0,-64.1923,-703.753	0/0:264:261,0:261:9221:0:0:0,-78.5688,-829.515	0/0:201:201,0:201:7158:0:0:0,-60.507,-644.252	0/0:200:200,0:200:7079:0:0:0,-60.206,-637.179	0/1:227:120,105:120:4225:105:3708:-265.76,0,-312.344	0/0:15:15,0:15:534:0:0:0,-4.51545,-48.3942	0/0:188:188,0:188:6657:0:0:0,-56.5936,-599.217	0/0:30:30,0:30:1054:0:0:0,-9.0309,-95.1704	0/1:19:7,12:7:246:12:417:-32.1257,0,-16.762	0/1:187:65,121:65:2309:121:4233:-324.793,0,-151.72	0/0:57:57,0:57:2009:0:0:0,-17.1587,-181.083	0/1:10:9,1:9:322:1:36:-0.587975,0,-26.314	0/0:26:26,0:26:924:0:0:0,-7.82678,-83.4777	0/0:64:61,0:61:2172:0:0:0,-18.3628,-195.435	0/1:65:34,30:34:1215:30:1052:-75.3635,0,-90.031	0/1:8:7,1:7:247:1:36:-1.19004,0,-20.1647	0/0:62:62,0:62:2184:0:0:0,-18.6639,-196.826	0/1:240:120,119:120:4271:119:4208:-306.564,0,-312.265	0/0:64:63,0:63:2215:0:0:0,-18.9649,-199.255	0/1:216:112,103:112:3975:103:3640:-262.71,0,-292.862	0/1:237:113,123:113:3987:123:4368:-321.97,0,-287.769	0/1:98:32,65:32:1140:65:2298:-177.515,0,-73.3485	0/0:5:5,0:5:179:0:0:0,-1.50515,-16.4604	0/1:98:54,43:54:1906:43:1493:-105.203,0,-142.384	0/1:60:36,24:36:1274:24:862:-59.8406,0,-96.9009	0/0:22:22,0:22:753:0:0:0,-6.62266,-68.0841	0/1:146:74,72:74:2579:72:2515:-182.6,0,-188.405	0/1:100:40,59:40:1418:59:2090:-158.131,0,-97.756	0/1:175:84,90:84:2984:90:3176:-233.296,0,-216.055	0/0:250:248,1:248:8757:1:36:0,-71.718,-784.532	0/1:142:72,69:72:2544:69:2433:-176.462,0,-186.456	0/1:145:70,73:70:2472:73:2601:-190.934,0,-179.337	0/1:26:8,17:8:287:17:594:-45.9007,0,-18.291	0/0:150:146,0:146:5161:0:0:0,-43.9504,-464.276	0/1:188:89,97:89:3147:97:3430:-252.592,0,-227.136	0/0:401:398,0:398:14087:0:0:0,-119.81,-1267.04	0/0:87:87,0:87:3114:0:0:0,-26.1896,-280.487	0/0:56:56,0:56:1990:0:0:0,-16.8577,-179.374	0/0:73:73,0:73:2593:0:0:0,-21.9752,-233.619	0/0:130:130,0:130:4617:0:0:0,-39.1339,-415.696	0/0:40:40,0:40:1425:0:0:0,-12.0412,-128.547	0/0:64:64,0:64:2276:0:0:0,-19.2659,-205.103	0/0:56:56,0:56:1997:0:0:0,-16.8577,-180.004	0/0:24:24,0:24:857:0:0:0,-7.22472,-77.4511	0/1:50:27,22:27:949:22:777:-55.1114,0,-70.6129	0/1:62:26,36:26:927:36:1274:-96.2988,0,-65.0847	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:61:61,0:61:2163:0:0:0,-18.3628,-194.937
chr12	20321415	.	G	T	51102.7	PASS	AB=0.531373;ABP=50.6986;AC=41;AF=0.218085;AN=188;AO=2976;CIGAR=1X;DP=10863;DPB=10863;DPRA=1.62772;EPP=6465.31;EPPR=17057.8;GTI=4;LEN=1;MEANALT=1.06383;MQM=59.6986;MQMR=59.9877;NS=94;NUMALT=1;ODDS=2.14993;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=106537;QR=282094;RO=7882;RPL=0;RPP=6465.31;RPPR=17057.8;RPR=2976;RUN=1;SAF=2976;SAP=6465.31;SAR=0;SRF=7882;SRP=17118.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:65:35,30:35:1260:30:1076:-77.5357,0,-94.1385	0/1:177:87,89:87:3105:89:3187:-233.363,0,-226.414	0/1:256:91,165:91:3263:165:5916:-455.436,0,-216.826	0/0:436:436,0:436:15603:0:0:0,-131.249,-1403.97	0/1:83:49,34:49:1752:34:1224:-85.4816,0,-132.979	0/1:46:27,19:27:972:19:684:-48.0429,0,-73.9505	0/0:87:87,0:87:3113:0:0:0,-26.1896,-280.395	0/1:216:106,110:106:3791:110:3940:-289.544,0,-276.366	0/0:131:131,0:131:4708:0:0:0,-39.4349,-423.87	0/0:114:114,0:114:4092:0:0:0,-34.3174,-368.464	0/0:23:23,0:23:801:0:0:0,-6.92369,-72.4067	0/0:65:65,0:65:2320:0:0:0,-19.5669,-209.061	0/0:70:70,0:70:2508:0:0:0,-21.0721,-225.972	0/0:42:42,0:42:1504:0:0:0,-12.6433,-135.655	0/0:58:58,0:58:2084:0:0:0,-17.4597,-187.83	0/0:47:47,0:47:1688:0:0:0,-14.1484,-152.207	0/0:47:47,0:47:1677:0:0:0,-14.1484,-151.215	0/0:43:43,0:43:1544:0:0:0,-12.9443,-139.253	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:305:126,179:126:4504:179:6409:-484.806,0,-313.715	0/1:212:105,107:105:3752:107:3839:-281.879,0,-274.062	0/1:204:67,137:67:2389:137:4915:-381.075,0,-153.856	0/0:84:83,1:83:2980:1:36:0,-21.6882,-264.834	0/0:138:132,6:132:4719:6:216:0,-21.7516,-405.079	0/0:111:111,0:111:3980:0:0:0,-33.4143,-358.39	0/1:392:174,217:174:6229:217:7773:-581.55,0,-442.77	0/0:236:236,0:236:8418:0:0:0,-71.0431,-757.622	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6743	0/1:482:223,259:223:7985:259:9263:-688.499,0,-573.573	0/1:64:34,30:34:1224:30:1072:-77.5063,0,-91.2011	0/0:152:152,0:152:5398:0:0:0,-45.7566,-485.952	0/1:10:2,8:2:72:8:288:-23.2571,0,-3.82642	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/0:6:6,0:6:212:0:0:0,-1.80618,-19.4248	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/1:119:60,59:60:2156:59:2109:-154.255,0,-158.484	0/1:289:134,155:134:4808:155:5542:-411.744,0,-345.869	0/0:51:51,0:51:1827:0:0:0,-15.3525,-164.71	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	0/0:279:278,1:278:9968:1:34:0,-80.5885,-893.657	0/0:38:37,0:37:1332:0:0:0,-11.1381,-119.881	0/0:142:141,0:141:5053:0:0:0,-42.4452,-454.622	0/0:40:40,0:40:1431:0:0:0,-12.0412,-129.087	0/1:44:25,19:25:900:19:684:-48.6435,0,-68.0757	0/1:127:69,58:69:2476:58:2084:-149.542,0,-184.863	0/0:220:219,1:219:7817:1:36:0,-62.6283,-699.962	0/0:257:257,0:257:9201:0:0:0,-77.3647,-828.059	0/0:199:199,0:199:7123:0:0:0,-59.905,-641.099	0/0:198:198,0:198:7072:0:0:0,-59.6039,-636.54	0/1:221:117,104:117:4195:104:3713:-267.776,0,-311.202	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:187:186,1:186:6680:1:36:0,-52.6943,-597.676	0/0:29:29,0:29:1040:0:0:0,-8.72987,-93.9135	0/1:18:7,11:7:252:11:396:-30.5478,0,-17.6104	0/1:183:65,118:65:2328:118:4207:-323.708,0,-154.691	0/0:57:57,0:57:2040:0:0:0,-17.1587,-183.872	0/1:10:9,1:9:324:1:36:-0.587975,0,-26.4956	0/0:26:26,0:26:932:0:0:0,-7.82678,-84.1989	0/0:62:62,0:62:2216:0:0:0,-18.6639,-199.7	0/1:65:34,31:34:1224:31:1108:-80.4627,0,-90.9001	0/1:8:7,1:7:252:1:36:-1.19004,0,-20.6207	0/0:61:61,0:61:2180:0:0:0,-18.3628,-196.466	0/1:235:115,119:115:4108:119:4252:-312.09,0,-299.172	0/0:63:63,0:63:2230:0:0:0,-18.9649,-200.961	0/1:217:113,104:113:4045:104:3720:-269.634,0,-298.912	0/1:233:112,121:112:4004:121:4323:-318.783,0,-290.41	0/1:97:32,65:32:1152:65:2328:-180.572,0,-74.7902	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:96:52,44:52:1868:44:1552:-111.007,0,-139.5	0/1:58:34,24:34:1220:24:864:-60.6228,0,-92.6471	0/0:21:21,0:21:741:0:0:0,-6.32163,-67.0116	0/1:142:71,71:71:2528:71:2534:-185.51,0,-185.02	0/1:99:39,60:39:1388:60:2143:-163.256,0,-95.417	0/1:173:82,91:82:2925:91:3264:-241.863,0,-211.405	0/0:243:241,2:241:8628:2:72:0,-66.3136,-769.675	0/1:142:72,70:72:2576:70:2512:-183.577,0,-189.343	0/1:142:69,73:69:2476:73:2620:-193.293,0,-180.347	0/1:26:8,18:8:288:18:648:-50.8251,0,-18.4406	0/0:149:149,0:149:5335:0:0:0,-44.8535,-480.283	0/1:186:87,99:87:3108:99:3555:-264.156,0,-223.956	0/0:395:395,0:395:14099:0:0:0,-118.907,-1268.57	0/0:86:86,0:86:3092:0:0:0,-25.8886,-278.507	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:70:70,0:70:2520:0:0:0,-21.0721,-227.051	0/0:128:128,0:128:4564:0:0:0,-38.5318,-410.925	0/0:40:40,0:40:1436:0:0:0,-12.0412,-129.538	0/0:62:62,0:62:2209:0:0:0,-18.6639,-199.073	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0826	0/1:48:28,20:28:1000:20:720:-50.6344,0,-75.8659	0/1:62:26,36:26:936:36:1283:-97.1088,0,-65.8956	0/0:7:7,0:7:252:0:0:0,-2.10721,-23.029	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545
chr12	20321418	.	T	C	159840	PASS	AB=0.468842;ABP=49.0188;AC=147;AF=0.781915;AN=188;AO=7735;CIGAR=1X;DP=10646;DPB=10646;DPRA=0;EPP=16712.6;EPPR=6282.94;GTI=4;LEN=1;MEANALT=1.05319;MQM=59.9856;MQMR=59.7397;NS=94;NUMALT=1;ODDS=0.885607;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=273816;QR=103848;RO=2904;RPL=10;RPP=16712.6;RPPR=6282.94;RPR=7725;RUN=1;SAF=7735;SAP=16799.3;SAR=0;SRF=2904;SRP=6308.97;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:61:27,34:27:968:34:1208:-90.6633,0,-69.0602	0/1:172:87,85:87:3128:85:3014:-219.714,0,-229.54	0/1:248:162,86:162:5816:86:3034:-198.637,0,-448.869	1/1:429:0,429:0:0:429:15230:-1370.43,-129.142,0	0/1:86:36,50:36:1284:50:1780:-134.594,0,-89.9748	0/1:43:17,26:17:608:26:924:-70.5334,0,-42.1077	1/1:85:0,85:0:0:85:3014:-271.492,-25.5876,0	0/1:213:110,103:110:3907:103:3657:-265.215,0,-287.58	1/1:125:0,125:0:0:125:4389:-395.187,-37.6288,0	1/1:117:1,115:1:36:115:4027:-359.083,-31.6211,0	1/1:22:0,22:0:0:22:768:-69.4376,-6.62266,0	1/1:66:0,66:0:0:66:2354:-212.118,-19.868,0	1/1:70:0,70:0:0:70:2504:-225.613,-21.0721,0	1/1:44:0,44:0:0:44:1546:-139.428,-13.2453,0	1/1:59:0,59:0:0:59:2100:-189.27,-17.7608,0	1/1:47:0,47:0:0:47:1654:-149.146,-14.1484,0	1/1:45:1,44:1:32:44:1552:-136.772,-10.347,0	1/1:42:0,42:0:0:42:1491:-134.483,-12.6433,0	1/1:29:0,29:0:0:29:1025:-92.5621,-8.72987,0	0/1:299:177,122:177:6352:122:4331:-299.96,0,-480.776	0/1:209:105,104:105:3772:104:3689:-269.298,0,-276.753	0/1:198:135,63:135:4824:63:2220:-140.459,0,-374.698	1/1:83:1,82:1:36:82:2924:-259.797,-21.3872,0	1/1:132:5,127:5:180:127:4487:-387.45,-23.1839,0	1/1:109:1,108:1:36:108:3846:-342.738,-29.214,0	0/1:373:207,166:207:7387:166:5863:-415.505,0,-552.462	1/1:233:0,233:0:0:233:8228:-740.541,-70.14,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:480:261,219:261:9333:219:7762:-554.125,0,-695.411	0/1:65:30,35:30:1076:35:1238:-92.1559,0,-77.5629	1/1:154:0,154:0:0:154:5469:-492.341,-46.3586,0	0/1:10:8,2:8:288:2:72:-3.82642,0,-23.2571	0/1:13:3,10:3:108:10:346:-27.5584,0,-6.16178	1/1:8:0,8:0:0:8:284:-25.9034,-2.40824,0	0/1:6:3,3:3:108:3:108:-8.26899,0,-8.26899	1/1:11:0,11:0:0:11:374:-33.9864,-3.31133,0	0/1:123:59,64:59:2108:64:2266:-167.175,0,-152.963	0/1:285:150,133:150:5329:133:4702:-337.793,0,-394.114	1/1:49:0,49:0:0:49:1743:-157.154,-14.7505,0	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	1/1:272:0,272:0:0:272:9607:-864.597,-81.8802,0	1/1:38:0,38:0:0:38:1338:-120.72,-11.4391,0	1/1:139:0,139:0:0:139:4903:-441.424,-41.8432,0	1/1:41:0,41:0:0:41:1453:-131.065,-12.3422,0	0/1:44:19,25:19:676:25:896:-67.715,0,-47.9211	0/1:125:57,68:57:2048:68:2390:-177.728,0,-146.906	1/1:218:1,217:1:36:217:7675:-687.197,-62.0263,0	1/1:249:0,249:0:0:249:8799:-791.908,-74.9565,0	1/1:193:0,193:0:0:193:6797:-611.807,-58.0988,0	1/1:194:0,194:0:0:194:6917:-622.599,-58.3998,0	0/1:220:102,117:102:3652:117:4147:-307.202,0,-262.645	1/1:15:0,15:0:0:15:536:-48.5748,-4.51545,0	1/1:184:0,184:0:0:184:6536:-588.327,-55.3895,0	1/1:28:0,28:0:0:28:983:-88.7824,-8.42884,0	0/1:18:11,7:11:396:7:248:-17.2457,0,-30.5478	0/1:178:114,64:114:4051:64:2284:-152.239,0,-311.175	1/1:54:0,54:0:0:54:1907:-171.907,-16.2556,0	0/1:10:1,9:1:36:9:324:-26.4956,0,-0.587975	1/1:25:0,25:0:0:25:891:-80.5088,-7.52575,0	1/1:61:0,61:0:0:61:2118:-190.884,-18.3628,0	0/1:63:30,33:30:1072:33:1172:-86.8226,0,-77.823	0/1:6:1,5:1:36:5:180:-14.7459,0,-1.79209	1/1:58:0,58:0:0:58:2055:-185.221,-17.4597,0	0/1:232:114,118:114:4083:118:4181:-306.635,0,-297.784	1/1:60:0,60:0:0:60:2136:-192.508,-18.0618,0	0/1:213:103,110:103:3692:110:3893:-286.444,0,-268.27	0/1:223:115,108:115:4107:108:3840:-278.668,0,-302.68	0/1:94:63,31:63:2256:31:1103:-71.283,0,-174.999	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:92:39,51:39:1388:51:1810:-135.802,0,-97.8288	0/1:57:22,35:22:792:35:1243:-95.0152,0,-54.447	1/1:21:0,21:0:0:21:735:-66.4714,-6.32163,0	0/1:141:68,73:68:2415:73:2565:-188.652,0,-175.095	0/1:98:60,38:60:2148:38:1348:-92.1193,0,-164.008	0/1:172:90,82:90:3224:82:2894:-208.92,0,-238.564	1/1:234:1,233:1:36:233:8246:-738.561,-66.8427,0	0/1:133:67,66:67:2389:66:2343:-171.092,0,-175.22	0/1:141:73,68:73:2615:68:2410:-174.711,0,-193.144	0/1:24:16,8:16:572:8:288:-19.0427,0,-44.5887	1/1:142:0,142:0:0:142:5027:-452.582,-42.7463,0	0/1:176:95,81:95:3404:81:2860:-204.658,0,-253.584	1/1:394:0,393:0:0:393:13872:-1247.84,-118.305,0	1/1:83:0,83:0:0:83:2951:-265.824,-24.9855,0	1/1:54:0,54:0:0:54:1914:-172.536,-16.2556,0	1/1:71:0,71:0:0:71:2532:-228.132,-21.3731,0	1/1:125:0,125:0:0:125:4397:-395.906,-37.6288,0	1/1:39:0,39:0:0:39:1384:-124.859,-11.7402,0	1/1:62:0,62:0:0:62:2190:-197.365,-18.6639,0	1/1:55:0,55:0:0:55:1928:-173.794,-16.5567,0	1/1:24:0,24:0:0:24:856:-77.3611,-7.22472,0	0/1:46:20,26:20:716:26:928:-69.9909,0,-50.8754	0/1:60:35,25:35:1256:25:879:-61.365,0,-95.2835	1/1:7:0,7:0:0:7:248:-22.6642,-2.10721,0	1/1:60:0,60:0:0:60:2144:-193.228,-18.0618,0
chr12	20478113	.	C	T	285014	PASS	AB=0.388093;ABP=830.678;AC=147;AF=0.781915;AN=188;AO=10631;CIGAR=1X;DP=15314;DPB=15314;DPRA=0;EPP=22992.5;EPPR=10128.6;GTI=5;LEN=1;MEANALT=1.07447;MQM=59.832;MQMR=59.9482;NS=94;NUMALT=1;ODDS=0.783841;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=379702;QR=166635;RO=4675;RPL=5464;RPP=21.0277;RPPR=42.3434;RPR=5167;RUN=1;SAF=5453;SAP=18.4574;SAR=5178;SRF=2191;SRP=42.886;SRR=2484;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:134:49,85:49:1760:85:3029:-232.371,0,-118.338	0/1:225:132,93:132:4728:93:3331:-232.213,0,-357.947	0/1:284:165,119:165:5871:119:4230:-295.292,0,-443.01	1/1:232:1,231:1:27:231:8210:-736.102,-67.1392,0	0/1:171:120,51:120:4286:51:1813:-111.964,0,-334.41	0/1:136:76,58:76:2713:58:2080:-146.771,0,-203.734	1/1:169:1,168:1:36:168:6006:-537.035,-47.2758,0	0/1:324:210,114:210:7504:114:4056:-267.673,0,-577.816	1/1:205:0,205:0:0:205:7299:-656.792,-61.7112,0	1/1:141:0,141:0:0:141:5027:-452.573,-42.4452,0	1/1:125:0,125:0:0:125:4464:-401.926,-37.6288,0	1/1:220:0,220:0:0:220:7895:-710.532,-66.2266,0	1/1:137:0,137:0:0:137:4903:-441.387,-41.2411,0	1/1:99:0,99:0:0:99:3543:-319.067,-29.802,0	1/1:161:0,161:0:0:161:5762:-518.675,-48.4658,0	1/1:116:0,116:0:0:116:4150:-373.655,-34.9195,0	1/1:113:0,113:0:0:113:4057:-365.312,-34.0164,0	1/1:87:0,87:0:0:87:3120:-280.656,-26.1896,0	1/1:75:0,75:0:0:75:2692:-242.508,-22.5773,0	0/1:323:207,116:207:7394:116:4164:-277.706,0,-568.275	0/1:351:199,152:199:7089:152:5412:-381.536,0,-532.406	0/1:126:98,28:98:3488:28:995:-51.9333,0,-276.2	1/1:123:2,121:2:72:121:4336:-383.576,-30.19,0	1/1:129:5,124:5:176:124:4416:-381.426,-22.6479,0	1/1:143:0,143:0:0:143:5098:-458.948,-43.0473,0	0/1:415:262,153:262:9330:153:5488:-369.107,0,-714.722	1/1:396:0,395:0:0:395:14097:-1268.07,-118.907,0	1/1:88:0,88:0:0:88:3160:-284.601,-26.4906,0	0/1:327:199,128:199:7090:128:4552:-311.404,0,-539.71	0/1:174:120,54:120:4250:54:1944:-122.852,0,-330.301	1/1:125:1,124:1:36:124:4402:-392.745,-34.0305,0	0/1:9:6,3:6:216:3:108:-7.3659,0,-17.0812	0/1:30:20,10:20:702:10:360:-23.7134,0,-54.4716	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:9:5,4:5:180:4:144:-10.6043,0,-13.8428	0/1:22:17,5:17:612:5:180:-9.9294,0,-48.7908	0/1:478:259,219:259:9256:219:7799:-558.04,0,-689.119	0/1:166:113,53:113:4043:53:1908:-121.989,0,-314.086	1/1:105:0,105:0:0:105:3752:-337.861,-31.6082,0	0/1:6:4,2:4:144:2:72:-5.03054,0,-11.5074	1/1:227:0,226:0:0:226:8072:-726.112,-68.0328,0	1/1:69:0,69:0:0:69:2472:-222.734,-20.7711,0	1/1:265:1,263:1:36:263:9353:-838.138,-76.2335,0	1/1:153:0,153:0:0:153:5475:-492.837,-46.0576,0	0/1:139:68,71:68:2440:71:2548:-187.722,0,-178.012	0/1:180:109,71:109:3907:71:2539:-174.575,0,-297.637	1/1:172:0,171:0:0:171:6124:-550.894,-51.4761,0	1/1:244:0,244:0:0:244:8744:-786.851,-73.4513,0	1/1:118:0,118:0:0:118:4195:-377.728,-35.5215,0	1/1:178:0,178:0:0:178:6327:-569.515,-53.5833,0	0/1:203:129,74:129:4575:74:2630:-175.833,0,-350.805	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:184:1,183:1:36:183:6519:-583.129,-51.7912,0	1/1:50:0,50:0:0:50:1784:-160.842,-15.0515,0	0/1:22:19,3:19:680:3:108:-3.45251,0,-54.9065	0/1:201:119,82:119:4251:82:2939:-204.232,0,-322.259	1/1:62:1,61:1:36:61:2175:-192.411,-15.0656,0	0/1:26:13,13:13:464:13:468:-34.6296,0,-34.2707	1/1:15:0,15:0:0:15:529:-47.9406,-4.51545,0	1/1:169:0,169:0:0:169:6052:-544.766,-50.8741,0	0/1:196:108,88:108:3865:88:3164:-225.979,0,-289.042	1/1:6:0,6:0:0:6:216:-19.7881,-1.80618,0	1/1:142:1,141:1:36:141:5057:-451.673,-39.148,0	0/1:278:154,124:154:5489:124:4419:-314.188,0,-410.451	1/1:89:4,85:4:144:85:3026:-259.246,-13.4781,0	0/1:143:90,53:90:3219:53:1900:-128.144,0,-246.885	0/1:289:177,111:177:6329:111:3977:-271.031,0,-482.643	0/1:217:158,59:158:5660:59:2108:-124.666,0,-444.191	1/1:74:1,73:1:36:73:2598:-230.47,-18.6779,0	0/1:185:110,75:110:3913:75:2675:-185.24,0,-296.673	0/1:156:77,79:77:2729:79:2828:-207.795,0,-198.891	1/1:35:0,35:0:0:35:1252:-112.985,-10.5361,0	0/1:205:144,61:144:5139:61:2173:-134.124,0,-400.937	0/1:150:93,57:93:3321:57:2009:-135.927,0,-253.951	0/1:320:224,96:224:7903:96:3417:-211.414,0,-614.72	1/1:220:0,220:0:0:220:7856:-707.054,-66.2266,0	0/1:215:128,87:128:4566:87:3111:-215.434,0,-346.385	0/1:187:109,78:109:3887:78:2777:-193.235,0,-293.724	0/1:42:26,16:26:927:16:548:-36.9989,0,-71.1041	1/1:216:0,216:0:0:216:7729:-695.628,-65.0225,0	0/1:194:120,73:120:4256:73:2607:-176.41,0,-324.756	1/1:399:1,398:1:36:398:14239:-1277.54,-116.513,0	1/1:181:1,180:1:36:180:6454:-577.902,-51.5057,0	1/1:120:0,120:0:0:120:4288:-386.082,-36.1236,0	1/1:162:0,162:0:0:162:5805:-522.476,-48.7669,0	1/1:264:2,262:2:72:262:9374:-836.767,-72.6352,0	1/1:81:0,81:0:0:81:2877:-259.166,-24.3834,0	1/1:154:0,154:0:0:154:5526:-497.431,-46.3586,0	1/1:139:0,139:0:0:139:4948:-445.445,-41.8432,0	1/1:77:0,77:0:0:77:2734:-246.298,-23.1793,0	0/1:168:84,84:84:2967:84:3007:-220.278,0,-216.687	0/1:183:132,51:132:4677:51:1808:-107.911,0,-366.006	1/1:168:0,168:0:0:168:6001:-540.173,-50.573,0	1/1:266:0,266:0:0:266:9479:-852.879,-80.074,0
chr12	20660276	.	GACAAA	GAAAAT,GAAAA,GAAT,GAA	519218	PASS	AB=0.445991,0.367877,0.269228,0.0878326;ABP=691.207,4079.31,7009.59,17138.9;AC=80,71,31,6;AF=0.425532,0.37766,0.164894,0.0319149;AN=188;AO=12964,9902,4079,1020;CIGAR=2M1X2M1X,2M1D3M,1M2D2M1X,1M3D2M;DP=28082;DPB=24557.2;DPRA=0,8.70267,0.86712,1.21488;EPP=28154,21504.9,8860.45,2217.91;EPPR=5.18177;GTI=10;LEN=6,1,4,3;MEANALT=3.94505,3.93407,4.71429,5;MQM=59.9707,59.999,56.4543,59.9451;MQMR=60;NS=94;NUMALT=4;ODDS=43404.4;PAIRED=0,0,0,0;PAIREDR=0;PAO=1.5,0.666667,1.5,0.666667;PQA=54,12,54,12;PQR=12;PRO=0.666667;QA=454853,349399,142934,35563;QR=36;RO=1;RPL=1407,9901,2,1014;RPP=17259.3,21496.2,8843.08,2166.1;RPPR=5.18177;RPR=11557,1,4077,6;RUN=1,1,1,1;SAF=1407,9901,2,1014;SAP=17259.3,21496.2,8843.08,2166.1;SAR=11557,1,4077,6;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,del,complex,del	GT:DP:AD:RO:QR:AO:QA:GL	2/4:136:0,25,44,29,37:0:0:25,44,29,37:873,1534,1034,1286:-229.306,-158.294,-150.768,-104.552,-33.5408,-91.3068,-145.149,-74.1367,-20.3941,-136.419,-124.753,-53.7415,0,-40.5951,-113.615	2/3:542:0,119,131,162,129:0:0:119,131,162,129:4171,4611,5680,4505:-836.704,-497.3,-461.478,-461.333,-121.929,-421.898,-375.371,-35.9679,0,-326.604,-470.262,-130.859,-94.8913,-8.92982,-431.429	1/3:524:0,154,116,132,120:0:0:154,116,132,120:5429,4079,4627,4175:-817.395,-375.585,-329.227,-485.364,-43.5534,-450.444,-441.81,0,-109.779,-402.074,-477.931,-36.1212,-145.9,-102.346,-441.807	1/2:671:0,321,350,0,0:0:0:321,350,0,0:11211,12333,0,0:-1916.4,-1004.47,-907.837,-912.285,0,-806.924,-1916.4,-1004.47,-912.285,-1916.4,-1916.4,-1004.47,-912.285,-1916.4,-1916.4	2/3:286:0,65,147,71,3:0:0:65,147,71,3:2271,5199,2487,100:-625.545,-440.809,-421.242,-202.097,-17.3603,-157.845,-423.449,-238.714,0,-402.076,-617.451,-432.715,-194.003,-415.355,-616.548	2/4:133:0,7,62,13,51:0:0:7,62,13,51:246,2224,460,1805:-328.429,-308.405,-306.298,-147.024,-127.001,-128.361,-291.017,-270.994,-109.613,-287.104,-181.406,-161.384,0,-143.995,-166.054	1/2:446:0,184,259,1,0:0:0:184,259,1,0:6418,9121,36,0:-1264.57,-742.589,-687.199,-522.008,0,-444.041,-1261.63,-739.652,-519.072,-1261.33,-1264.57,-742.589,-522.008,-1261.63,-1264.57	3/4:596:0,138,142,163,151:0:0:138,142,163,151:4841,4964,5732,5311:-897.97,-504.055,-462.513,-494.148,-100.233,-451.402,-432.324,-38.4085,-28.502,-383.256,-465.646,-71.731,-61.8245,0,-420.191	1/2:349:0,126,219,0,0:0:0:126,219,0,0:4412,7693,0,0:-985.158,-626.177,-588.247,-359.021,0,-293.095,-985.158,-626.177,-359.021,-985.158,-985.158,-626.177,-359.021,-985.158,-985.158	1/2:332:0,119,210,0,0:0:0:119,210,0,0:4138,7364,0,0:-935.716,-599.276,-563.454,-336.461,0,-273.245,-935.716,-599.276,-336.461,-935.716,-935.716,-599.276,-336.461,-935.716,-935.716	1/2:104:0,64,40,0,0:0:0:64,40,0,0:2208,1404,0,0:-293.984,-114.616,-95.35,-179.716,0,-167.675,-293.984,-114.616,-179.716,-293.984,-293.984,-114.616,-179.716,-293.984,-293.984	1/2:174:1,95,78,0,0:1:36:95,78,0,0:3295,2761,0,0:-489.482,-221.956,-196.296,-264.88,0,-244.337,-489.783,-224.894,-267.817,-492.72,-489.783,-224.894,-267.817,-492.72,-492.72	1/2:164:0,86,77,0,0:0:0:86,77,0,0:3035,2711,0,0:-467.917,-220.776,-194.887,-247.212,0,-224.033,-467.917,-220.776,-247.212,-467.917,-467.917,-220.776,-247.212,-467.917,-467.917	1/2:159:0,92,67,0,0:0:0:92,67,0,0:3224,2309,0,0:-450.244,-187.901,-160.206,-262.691,0,-242.522,-450.244,-187.901,-262.691,-450.244,-450.244,-187.901,-262.691,-450.244,-450.244	1/2:155:0,73,82,0,0:0:0:73,82,0,0:2562,2906,0,0:-445.596,-237.092,-215.117,-208.856,0,-184.171,-445.596,-237.092,-208.856,-445.596,-445.596,-237.092,-208.856,-445.596,-445.596	1/2:111:0,44,36,29,2:0:0:44,36,29,2:1532,1258,1018,72:-226.908,-102.333,-89.0881,-124.573,0,-113.736,-144.128,-19.5536,-41.7932,-135.398,-221.033,-96.4583,-118.698,-138.253,-220.431	1/2:142:0,85,57,0,0:0:0:85,57,0,0:2973,2028,0,0:-407.498,-165.634,-140.046,-242.217,0,-225.058,-407.498,-165.634,-242.217,-407.498,-407.498,-165.634,-242.217,-407.498,-407.498	1/2:170:0,89,81,0,0:0:0:89,81,0,0:3155,2871,0,0:-491.276,-234.245,-207.453,-257.385,0,-233.002,-491.276,-234.245,-257.385,-491.276,-491.276,-234.245,-257.385,-491.276,-491.276	1/2:71:0,33,38,0,0:0:0:33,38,0,0:1142,1336,0,0:-201.903,-109.101,-99.1668,-93.1505,0,-81.7114,-201.903,-109.101,-93.1505,-201.903,-201.903,-109.101,-93.1505,-201.903,-201.903	1/2:769:0,233,353,177,1:0:0:233,353,177,1:8219,12528,6168,27:-1689.99,-1020.75,-950.61,-669.245,0,-562.982,-1188.76,-519.523,-168.017,-1135.48,-1687.86,-1018.62,-667.117,-1186.64,-1687.56	1/2:359:0,118,138,94,5:0:0:118,138,94,5:4129,4822,3288,172:-728.178,-392.252,-356.731,-335.927,0,-294.385,-461.29,-125.364,-69.0387,-432.993,-714.209,-378.283,-321.958,-447.321,-712.704	1/3:299:0,142,0,151,1:0:0:142,0,151,1:4998,0,5305,32:-838.489,-431.615,-388.869,-838.489,-431.615,-838.489,-406.876,0,-406.876,-361.421,-835.918,-429.044,-835.918,-404.305,-835.617	1/2:235:0,93,139,2,0:0:0:93,139,2,0:3225,4917,72,0:-662.639,-400.506,-372.51,-262.148,0,-220.305,-656.769,-394.637,-256.279,-656.167,-662.639,-400.506,-262.148,-656.769,-66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chr12	20703969	.	G	A	116038	PASS	AB=0.521915;ABP=15.3832;AC=146;AF=0.776596;AN=188;AO=5440;CIGAR=1X;DP=6873;DPB=6873;DPRA=18.4651;EPP=11815.8;EPPR=3112.56;GTI=1;LEN=1;MEANALT=1.01075;MQM=59.9899;MQMR=59.9909;NS=94;NUMALT=1;ODDS=4.33017;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=194183;QR=50907;RO=1432;RPL=5440;RPP=11815.8;RPPR=3112.56;RPR=0;RUN=1;SAF=0;SAP=11815.8;SAR=5440;SRF=0;SRP=3112.56;SRR=1432;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:54:17,37:17:604:37:1332:-103.927,0,-38.435	0/1:54:21,33:21:756:33:1184:-90.6127,0,-52.1116	0/1:99:30,69:30:1076:69:2468:-192.572,0,-67.3509	1/1:139:0,139:0:0:139:4954:-446.008,-41.8432,0	0/1:42:31,11:31:1108:11:392:-22.9768,0,-87.3877	0/1:23:16,7:16:568:7:252:-16.1053,0,-44.5282	1/1:102:0,102:0:0:102:3636:-327.446,-30.7051,0	0/1:147:71,76:71:2522:76:2719:-200.701,0,-182.98	1/1:128:0,128:0:0:128:4588:-413.084,-38.5318,0	1/1:57:0,57:0:0:57:2009:-181.081,-17.1587,0	1/1:42:0,42:0:0:42:1499:-135.204,-12.6433,0	1/1:97:0,97:0:0:97:3461:-311.701,-29.1999,0	1/1:90:0,90:0:0:90:3216:-289.663,-27.0927,0	1/1:45:0,45:0:0:45:1612:-145.37,-13.5464,0	1/1:67:0,67:0:0:67:2393:-215.627,-20.169,0	0/1:59:28,31:28:987:31:1116:-82.9909,0,-71.3823	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	1/1:33:0,33:0:0:33:1175:-106.057,-9.93399,0	1/1:49:0,49:0:0:49:1748:-157.604,-14.7505,0	0/1:159:72,87:72:2576:87:3112:-232.443,0,-184.226	0/1:85:43,42:43:1524:42:1480:-107.904,0,-111.866	0/1:76:40,36:40:1428:36:1265:-91.2719,0,-105.939	1/1:125:0,125:0:0:125:4441:-399.862,-37.6288,0	1/1:66:2,64:2:72:64:2300:-200.424,-13.0313,0	1/1:114:0,114:0:0:114:4084:-367.746,-34.3174,0	0/1:151:63,88:63:2223:88:3125:-236.021,0,-154.879	1/1:184:0,184:0:0:184:6571:-591.463,-55.3895,0	1/1:28:0,28:0:0:28:1000:-90.3154,-8.42884,0	0/1:172:92,80:92:3284:80:2853:-205.231,0,-244.003	0/1:61:18,43:18:636:43:1531:-119.72,0,-39.2052	1/1:59:3,56:3:108:56:1997:-169.927,-7.6856,0	0/1:19:9,10:9:320:10:360:-27.0247,0,-23.4228	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:10:0,10:0:0:10:356:-32.3812,-3.0103,0	0/1:8:4,4:4:144:4:144:-10.9054,0,-10.9054	0/1:13:9,4:9:316:4:144:-9.40023,0,-24.8655	0/1:196:101,95:101:3594:95:3416:-248.651,0,-264.665	0/1:89:54,35:54:1920:35:1260:-86.9138,0,-146.285	1/1:56:0,56:0:0:56:1998:-180.094,-16.8577,0	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	1/1:140:0,140:0:0:140:5008:-450.868,-42.1442,0	1/1:34:0,34:0:0:34:1224:-110.467,-10.235,0	1/1:113:0,113:0:0:113:4009:-360.998,-34.0164,0	1/1:80:1,79:1:36:79:2840:-252.239,-20.4841,0	0/1:81:48,33:48:1698:33:1164:-80.6822,0,-128.721	0/1:66:27,39:27:960:39:1394:-105.89,0,-66.8483	1/1:141:0,141:0:0:141:5025:-452.397,-42.4452,0	1/1:66:0,66:0:0:66:2341:-210.933,-19.868,0	1/1:83:0,83:0:0:83:2950:-265.733,-24.9855,0	1/1:66:0,66:0:0:66:2332:-210.139,-19.868,0	0/1:23:9,14:9:320:14:504:-38.7744,0,-22.2187	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:123:0,123:0:0:123:4388:-395.094,-37.0267,0	1/1:27:0,27:0:0:27:968:-87.4374,-8.12781,0	0/1:14:5,9:5:180:9:324:-25.2914,0,-12.3376	0/1:64:19,45:19:668:45:1616:-126.464,0,-41.1797	1/1:56:0,56:0:0:56:1998:-180.092,-16.8577,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:14:0,14:0:0:14:489:-44.3389,-4.21442,0	1/1:69:0,69:0:0:69:2420:-218.034,-20.7711,0	0/1:90:31,59:31:1108:59:2124:-164.336,0,-72.9383	1/1:8:0,8:0:0:8:273:-24.9002,-2.40824,0	1/1:119:0,119:0:0:119:4205:-378.632,-35.8226,0	0/1:109:60,49:60:2140:49:1748:-124.792,0,-160.056	1/1:50:0,50:0:0:50:1800:-162.282,-15.0515,0	0/1:43:22,21:22:784:21:744:-54.34,0,-57.9396	0/1:76:35,41:35:1244:41:1476:-110.258,0,-89.3864	0/1:86:52,34:52:1860:34:1220:-84.2182,0,-141.791	1/1:38:0,38:0:0:38:1344:-121.26,-11.4391,0	0/1:20:12,8:12:424:8:288:-20.2468,0,-32.4758	0/1:32:14,18:14:491:18:644:-48.6576,0,-34.8882	1/1:25:0,25:0:0:25:896:-80.9604,-7.52575,0	0/1:93:50,43:50:1784:43:1548:-111.617,0,-132.847	0/1:64:23,41:23:812:41:1445:-111.078,0,-54.135	0/1:112:55,57:55:1946:57:2032:-149.437,0,-141.699	1/1:138:0,138:0:0:138:4945:-445.197,-41.5421,0	0/1:72:35,37:35:1244:37:1324:-97.7879,0,-90.5905	0/1:71:25,46:25:869:46:1648:-127.235,0,-57.1507	0/1:12:3,9:3:108:9:324:-25.8935,0,-6.46281	1/1:101:1,100:1:36:100:3584:-319.168,-26.8058,0	0/1:64:27,37:27:960:37:1313:-99.2038,0,-67.4504	1/1:230:0,229:0:0:229:8166:-734.698,-68.9359,0	1/1:74:1,73:1:36:73:2620:-232.449,-18.6779,0	1/1:55:0,55:0:0:55:1964:-177.035,-16.5567,0	1/1:50:1,49:1:32:49:1752:-154.778,-11.865,0	1/1:127:1,126:1:36:126:4496:-401.21,-34.6325,0	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:72:0,72:0:0:72:2572:-231.73,-21.6742,0	0/1:79:32,47:32:1127:47:1664:-126.264,0,-77.9561	1/1:35:0,35:0:0:35:1247:-112.534,-10.5361,0	0/1:107:63,44:63:2243:44:1584:-110.641,0,-169.923	0/1:81:52,29:52:1851:29:1036:-69.1705,0,-142.486	1/1:74:0,74:0:0:74:2644:-238.206,-22.2762,0	1/1:127:0,127:0:0:127:4556:-410.205,-38.2308,0
chr12	20850183	.	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chr12	21003158	.	T	C	55440.7	PASS	AB=0.37091;ABP=1055.87;AC=41;AF=0.218085;AN=188;AO=2726;CIGAR=1X;DP=16369;DPB=16369;DPRA=1.22769;EPP=26.0314;EPPR=5019.74;GTI=2;LEN=1;MEANALT=1.01818;MQM=59.7212;MQMR=49.1153;NS=94;NUMALT=1;ODDS=6.58704;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=97118;QR=487393;RO=13642;RPL=2722;RPP=5887.75;RPPR=29253.9;RPR=4;RUN=1;SAF=1274;SAP=28.2491;SAR=1452;SRF=3971;SRP=5174.62;SRR=9671;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:75:73,2:73:2592:2:72:0,-15.7405,-219.208	0/1:217:156,61:156:5581:61:2184:-131.491,0,-377.576	0/1:243:129,114:129:4620:114:4073:-293.485,0,-321.622	0/0:263:263,0:263:9372:0:0:0,-79.1709,-736.884	0/1:65:46,19:46:1641:19:675:-41.51,0,-107.382	0/1:79:47,32:47:1684:32:1148:-79.8476,0,-112.349	0/0:136:135,1:135:4817:1:36:0,-37.3418,-384.916	0/1:250:181,69:181:6452:69:2460:-146.383,0,-454.04	0/1:163:105,58:105:3755:58:2080:-138.4,0,-280.542	0/0:211:211,0:211:7517:0:0:0,-63.5173,-566.535	0/0:158:158,0:158:5624:0:0:0,-47.5627,-452.197	0/1:223:129,94:129:4614:94:3346:-234.211,0,-319.126	0/0:227:227,0:227:8131:0:0:0,-68.3338,-676.641	0/0:252:252,0:252:9023:0:0:0,-75.8596,-736.407	0/0:227:226,1:226:8111:1:36:0,-64.7355,-671.361	0/1:157:94,63:94:3368:63:2233:-153.956,0,-240.584	0/0:218:218,0:218:7768:0:0:0,-65.6245,-644.076	0/0:174:174,0:174:6235:0:0:0,-52.3792,-527.423	0/0:96:96,0:96:3410:0:0:0,-28.8989,-289.091	0/1:259:162,97:162:5775:97:3433:-231.178,0,-370.731	0/1:234:135,99:135:4788:99:3524:-246.928,0,-321.14	0/1:101:76,25:76:2713:25:879:-49.0228,0,-174.886	0/0:131:131,0:131:4683:0:0:0,-39.4349,-401.857	0/0:158:149,9:149:5340:9:320:0,-18.4204,-421.728	0/0:85:85,0:85:3032:0:0:0,-25.5875,-260.849	0/1:395:271,124:271:9664:124:4410:-278.107,0,-643.144	0/0:320:319,1:319:11423:1:36:0,-92.7313,-939.344	0/0:77:77,0:77:2759:0:0:0,-23.1793,-223.554	0/1:251:167,84:167:5975:84:2985:-193.323,0,-389.836	0/1:208:156,52:156:5592:52:1849:-104.039,0,-362.334	0/0:179:179,0:179:6398:0:0:0,-53.8844,-520.324	0/1:5:3,2:3:104:2:72:-5.25817,0,-8.19766	0/0:12:12,0:12:432:0:0:0,-3.61236,-37.8481	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	0/1:10:4,6:4:144:6:216:-16.7802,0,-8.73139	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/1:478:292,186:292:10453:186:6624:-452.336,0,-677.227	0/1:156:110,46:110:3932:46:1612:-98.3966,0,-253.003	0/0:152:152,0:152:5414:0:0:0,-45.7566,-452.363	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:316:316,0:316:11282:0:0:0,-95.1255,-925.1	0/0:66:66,0:66:2376:0:0:0,-19.868,-201.792	0/0:230:228,2:228:8144:2:72:0,-62.4002,-672.309	0/0:174:174,0:174:6203:0:0:0,-52.3792,-523.696	0/1:179:100,79:100:3583:79:2796:-197.971,0,-246	0/1:106:73,33:73:2588:33:1180:-74.5989,0,-185.548	0/0:155:152,3:152:5436:3:107:0,-37.8209,-461.061	0/0:256:255,1:255:9116:1:36:0,-73.4654,-729.862	0/0:166:166,0:166:5927:0:0:0,-49.971,-453.558	0/0:265:265,0:265:9520:0:0:0,-79.7729,-706.913	0/1:160:108,52:108:3868:52:1864:-119.846,0,-232.625	0/0:6:6,0:6:216:0:0:0,-1.80618,-14.7979	0/0:274:274,0:274:9756:0:0:0,-82.4822,-790.057	0/0:89:89,0:89:3192:0:0:0,-26.7917,-219.182	0/1:11:5,6:5:180:6:216:-16.4792,0,-11.2406	0/1:194:119,75:119:4242:75:2675:-182.53,0,-288.394	0/0:61:61,0:61:2176:0:0:0,-18.3628,-189.847	0/0:5:5,0:5:180:0:0:0,-1.50515,-14.1819	0/0:22:22,0:22:788:0:0:0,-6.62266,-69.3438	0/0:143:143,0:143:5136:0:0:0,-43.0473,-420.335	0/1:252:153,99:153:5492:99:3532:-242.227,0,-342.961	0/0:9:9,0:9:311:0:0:0,-2.70927,-28.3237	0/0:442:440,2:440:15677:2:72:0,-126.219,-1069.39	0/1:266:177,89:177:6340:89:3177:-206.079,0,-424.479	0/0:125:123,2:123:4401:2:72:0,-30.7924,-305.191	0/1:119:73,46:73:2600:46:1636:-111.599,0,-181.008	0/1:223:146,77:146:5224:77:2760:-181.194,0,-357.203	0/1:269:128,141:128:4573:141:5012:-370.231,0,-288.756	0/0:80:80,0:80:2868:0:0:0,-24.0824,-234.81	0/1:130:82,48:82:2931:48:1716:-115.527,0,-208.049	0/1:250:161,89:161:5768:89:3187:-210.688,0,-348.902	0/0:33:33,0:33:1184:0:0:0,-9.93399,-92.7283	0/1:100:62,38:62:2201:38:1347:-91.4265,0,-142.538	0/1:178:126,52:126:4502:52:1860:-114.064,0,-314.472	0/1:279:185,94:185:6618:94:3344:-217.072,0,-464.586	0/0:292:290,1:290:10371:1:36:0,-84.3613,-774.449	0/0:123:123,0:123:4384:0:0:0,-37.0267,-338.834	0/1:279:168,111:168:5994:111:3971:-273.263,0,-401.594	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/0:205:205,0:205:7334:0:0:0,-61.7111,-602.881	0/1:176:109,67:109:3872:67:2388:-160.612,0,-264.068	0/0:286:286,0:286:10222:0:0:0,-86.0946,-874.799	0/0:276:275,1:275:9831:1:32:0,-79.885,-757.66	0/0:219:219,0:219:7818:0:0:0,-65.9256,-643.155	0/0:195:195,0:195:6982:0:0:0,-58.7008,-567.286	0/0:357:357,0:357:12753:0:0:0,-107.468,-1049.2	0/0:110:110,0:110:3916:0:0:0,-33.1133,-313.124	0/0:209:209,0:209:7436:0:0:0,-62.9153,-629.344	0/1:175:106,69:106:3804:69:2456:-168.607,0,-269.603	0/0:107:106,1:106:3791:1:29:0,-30.2612,-320.259	0/1:203:133,70:133:4747:70:2496:-163.776,0,-317.854	0/1:209:91,118:91:3238:118:4206:-315.782,0,-199.534	0/0:303:302,1:302:10726:1:36:0,-87.6138,-816.397	0/0:337:337,0:337:12063:0:0:0,-101.447,-993.898
chr12	21610782	.	A	G	44790.8	PASS	AB=0.424248;ABP=292.849;AC=44;AF=0.234043;AN=188;AO=2489;CIGAR=1X;DP=12760;DPB=12760;DPRA=1.05496;EPP=5381.78;EPPR=22284.5;GTI=3;LEN=1;MEANALT=1.03922;MQM=44.7726;MQMR=57.2248;NS=94;NUMALT=1;ODDS=5.49876;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=86789;QR=364639;RO=10269;RPL=1207;RPP=7.91771;RPPR=23.2006;RPR=1282;RUN=1;SAF=1210;SAP=7.16393;SAR=1279;SRF=4980;SRP=23.2006;SRR=5289;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:61:61,0:61:2175:0:0:0,-18.3628,-195.77	0/1:162:67,95:67:2399:95:3325:-226.012,0,-166.878	0/1:257:143,114:143:5048:114:3976:-242.509,0,-375.642	0/0:322:321,1:321:11445:1:36:0,-94.0289,-1023.91	0/1:60:41,18:41:1460:18:648:-33.6829,0,-113.611	0/1:63:38,25:38:1360:25:883:-51.0364,0,-103.521	0/0:199:199,0:199:7082:0:0:0,-59.905,-635.499	0/1:214:124,90:124:4397:90:3093:-189.994,0,-331.178	0/1:84:51,33:51:1815:33:1131:-64.9508,0,-138.011	0/0:190:190,0:190:6744:0:0:0,-57.1957,-606.58	0/0:123:122,1:122:4314:1:36:0,-33.524,-383.622	0/1:120:66,54:66:2327:54:1841:-113.945,0,-172.636	0/0:116:116,0:116:4139:0:0:0,-34.9195,-372.464	0/0:132:132,0:132:4676:0:0:0,-39.736,-420.788	0/0:107:107,0:107:3776:0:0:0,-32.2102,-339.04	0/1:106:64,42:64:2262:42:1454:-87.3566,0,-170.73	0/0:128:128,0:128:4527:0:0:0,-38.5318,-407.512	0/0:90:90,0:90:3200:0:0:0,-27.0927,-288.009	0/0:64:64,0:64:2280:0:0:0,-19.2659,-205.232	0/1:254:171,83:171:6083:83:2874:-157.063,0,-470.44	0/1:110:70,40:70:2455:40:1379:-77.0634,0,-187.75	0/1:111:58,53:58:2065:53:1820:-113.717,0,-152.583	0/0:107:107,0:107:3765:0:0:0,-32.2102,-338.066	0/0:147:137,9:137:4890:9:310:0,-21.5205,-417.149	0/0:105:105,0:105:3756:0:0:0,-31.6081,-336.9	0/1:408:265,143:265:9465:143:5106:-313.125,0,-728.608	0/0:269:268,1:268:9462:1:36:0,-77.3788,-845.272	0/0:52:52,0:52:1856:0:0:0,-15.6536,-166.988	0/1:263:177,86:177:6297:86:2981:-159.671,0,-485.657	0/1:123:77,46:77:2756:46:1591:-89.4504,0,-210.883	0/1:124:88,36:88:3125:36:1280:-64.5199,0,-243.625	0/1:16:14,2:14:492:2:72:-1.20127,0,-39.6335	0/0:17:17,0:17:608:0:0:0,-5.11751,-54.9855	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.8883	0/1:10:8,2:8:271:2:72:-2.18848,0,-21.6638	0/1:22:9,13:9:320:13:460:-25.5165,0,-22.3528	0/1:276:135,141:135:4808:141:4872:-329.464,0,-349.357	0/1:144:84,60:84:2991:60:2102:-130.452,0,-225.853	0/0:89:89,0:89:3126:0:0:0,-26.7917,-281.39	0/1:7:5,2:5:180:2:72:-3.91054,0,-14.4402	0/0:227:227,0:227:8018:0:0:0,-68.3338,-718.57	0/0:82:82,0:82:2885:0:0:0,-24.6845,-259.508	0/0:187:187,0:187:6614:0:0:0,-56.2926,-592.417	0/0:113:113,0:113:4011:0:0:0,-34.0164,-359.672	0/1:76:38,38:38:1326:38:1325:-93.369,0,-96.73	0/1:94:50,44:50:1744:44:1520:-97.2654,0,-128.55	0/0:212:212,0:212:7575:0:0:0,-63.8184,-680.412	0/0:214:214,0:214:7602:0:0:0,-64.4204,-683.695	0/0:179:179,0:179:6373:0:0:0,-53.8844,-572.467	0/0:219:219,0:219:7788:0:0:0,-65.9256,-700.052	0/1:132:94,38:94:3363:38:1364:-71.0549,0,-262.91	0/0:19:19,0:19:672:0:0:0,-5.71957,-60.688	0/0:195:195,0:195:6909:0:0:0,-58.7008,-621.135	0/0:111:111,0:111:3932:0:0:0,-33.4143,-352.969	0/1:9:3,6:3:108:6:201:-14.8457,0,-7.3659	0/1:160:110,50:110:3911:50:1744:-91.2336,0,-300.182	0/0:35:35,0:35:1209:0:0:0,-10.536,-107.957	0/0:13:12,1:12:432:1:36:0,-1.01063,-36.22	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.5407	0/0:115:115,0:115:4070:0:0:0,-34.6184,-365.502	0/1:149:71,78:71:2509:78:2729:-177.913,0,-181.067	0/0:11:11,0:11:376:0:0:0,-3.31133,-34.1006	0/0:231:231,0:231:8219:0:0:0,-69.5379,-739.284	0/1:274:188,86:188:6700:86:3020:-159.578,0,-520.158	0/0:181:176,5:176:6276:5:180:0,-39.5206,-548.708	0/1:95:52,43:52:1856:43:1498:-92.8393,0,-138.408	0/1:162:100,62:100:3549:62:2190:-132.488,0,-270.385	0/1:155:59,96:59:2083:96:3315:-216.509,0,-140.895	0/0:75:75,0:75:2655:0:0:0,-22.5772,-238.644	0/1:103:64,39:64:2275:39:1326:-76.7974,0,-173.566	0/1:113:49,64:49:1748:64:2257:-162.112,0,-123.551	0/0:49:49,0:49:1717:0:0:0,-14.7505,-154.61	0/1:100:58,42:58:2051:42:1460:-86.6233,0,-154.699	0/1:121:67,54:67:2382:54:1912:-114.258,0,-178.106	0/1:193:121,72:121:4292:72:2508:-151.289,0,-327.86	0/0:346:346,0:346:12283:0:0:0,-104.156,-1103.99	0/0:189:189,0:189:6715:0:0:0,-56.8947,-602.605	0/1:176:90,86:90:3220:86:3024:-189.698,0,-236.61	0/1:19:8,11:8:279:11:383:-21.5943,0,-19.6101	0/0:265:265,0:265:9385:0:0:0,-79.7729,-842.942	0/1:136:79,57:79:2781:57:2024:-127.461,0,-209.455	0/0:376:376,0:376:13367:0:0:0,-113.187,-1201.12	0/0:97:97,0:97:3448:0:0:0,-29.1999,-310.147	0/1:127:64,63:64:2237:63:2205:-144.386,0,-163.222	0/0:128:128,0:128:4576:0:0:0,-38.5318,-411.713	0/0:222:218,4:218:7739:4:140:0,-55.5515,-683.005	0/0:47:47,0:47:1666:0:0:0,-14.1484,-150.19	0/0:120:120,0:120:4287:0:0:0,-36.1236,-385.688	0/1:121:67,54:67:2391:54:1878:-118.369,0,-178.954	0/1:98:52,46:52:1846:46:1597:-102.268,0,-136.688	0/1:173:74,99:74:2627:99:3391:-230.407,0,-182.738	0/1:95:34,61:34:1203:61:2112:-147.791,0,-79.9553	0/0:147:147,0:147:5242:0:0:0,-44.2514,-471.372	0/0:196:196,0:196:6988:0:0:0,-59.0019,-628.34
chr12	21610788	.	AAT	CAA,CAG	339576	PASS	AB=0.573291,0.420692;ABP=282.158,329.875;AC=144,44;AF=0.765957,0.234043;AN=188;AO=10563,2537;CIGAR=1X1M1X,1X1M1X;DP=13171;DPB=13175;DPRA=0,1.0595;EPP=22914.2,5494.68;EPPR=5.18177;GTI=3;LEN=3,3;MEANALT=2.17021,2.72;MQM=57.1236,44.6003;MQMR=49;NS=94;NUMALT=2;ODDS=6.33645;PAIRED=0,0;PAIREDR=0;PAO=4.5,4.5;PQA=162,162;PQR=0;PRO=3;QA=363737,86702;QR=36;RO=1;RPL=5177,1243;RPP=11.99,5.23655;RPPR=5.18177;RPR=5386,1294;RUN=1,1;SAF=5176,1245;SAP=12.1626,4.90103;SAR=5387,1292;SRF=1;SRP=5.18177;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:59:0,59,0:0:0:59,0:2026,0:-182.422,-17.7608,0,-182.422,-17.7608,-182.422	1/2:166:0,68,97:0:0:68,97:2376,3364:-441.32,-248.31,-227.84,-192.986,0,-163.786	1/2:256:0,144,111:0:0:144,111:4982,3822:-678.658,-274.676,-231.327,-403.967,0,-370.552	1/1:328:0,326,1:0:0:326,1:11159,36:-1002.03,-98.1358,0,-999.722,-95.7826,-999.421	1/2:60:0,40,20:0:0:40,20:1379,681:-160.892,-48.952,-36.9108,-112.258,0,-106.237	1/2:65:0,39,26:0:0:39,26:1344,912:-174.284,-65.3098,-53.5696,-109.298,0,-101.471	1/1:208:0,205,0:0:0:205,0:7130,0:-639.877,-61.7112,0,-639.877,-61.7112,-639.877	1/2:217:0,125,89:0:0:125,89:4358,3106:-580.884,-226.752,-189.123,-354.116,0,-327.325	1/2:85:0,50,34:0:0:50,34:1687,1133:-218.448,-81.9844,-66.9329,-136.421,0,-126.186	1/1:192:0,192,0:0:0:192,0:6706,0:-603.076,-57.7978,0,-603.076,-57.7978,-603.076	1/1:126:0,125,0:0:0:125,0:4276,0:-383.902,-37.6288,0,-383.902,-37.6288,-383.902	1/2:120:0,61,57:0:0:61,57:2056,1911:-304.436,-138.174,-119.811,-166.242,0,-149.083	1/1:118:0,117,0:0:0:117,0:4007,0:-360.295,-35.2205,0,-360.295,-35.2205,-360.295	1/1:129:0,128,0:0:0:128,0:4392,0:-394.996,-38.5318,0,-394.996,-38.5318,-394.996	1/1:115:0,114,0:0:0:114,0:3914,0:-351.795,-34.3174,0,-351.795,-34.3174,-351.795	1/2:111:0,65,45:0:0:65,45:2221,1523:-290.583,-110.695,-91.1281,-179.85,0,-166.304	1/1:132:0,131,0:0:0:131,0:4525,0:-407.035,-39.4349,0,-407.035,-39.4349,-407.035	1/1:92:0,92,0:0:0:92,0:3232,0:-291.034,-27.6948,0,-291.034,-27.6948,-291.034	1/1:67:0,65,0:0:0:65,0:2223,0:-199.844,-19.567,0,-199.844,-19.567,-199.844	1/2:265:0,179,84:0:0:179,84:6194,2904:-712.994,-210.148,-156.263,-502.81,0,-477.524	1/2:111:0,72,37:0:0:72,37:2423,1192:-283.365,-87.247,-65.5729,-196.174,0,-185.036	1/2:112:0,59,53:0:0:59,53:2045,1813:-296.597,-130.425,-112.665,-166.497,0,-150.542	1/1:115:0,115,0:0:0:115,0:3925,0:-352.787,-34.6185,0,-352.787,-34.6185,-352.787	1/1:153:0,144,8:0:0:144,8:5017,286:-451.108,-43.3483,0,-432.708,-24.867,-430.3	1/1:116:0,115,0:0:0:115,0:3945,0:-353.62,-34.6185,0,-353.62,-34.6185,-353.62	1/2:417:0,269,147:0:0:269,147:9365,5120:-1156.57,-395.274,-314.297,-761.277,0,-717.026	1/1:299:0,297,1:0:0:297,1:10152,36:-911.271,-89.4059,0,-908.334,-86.4986,-908.033	1/1:54:0,54,0:0:0:54,0:1877,0:-168.894,-16.2556,0,-168.894,-16.2556,-168.894	1/2:268:0,186,82:0:0:186,82:6417,2835:-723.302,-203.367,-147.375,-520.255,0,-495.57	1/2:125:0,79,45:0:0:79,45:2698,1542:-326.947,-108.286,-84.5047,-218.618,0,-205.072	1/2:130:0,92,36:0:0:92,36:3171,1230:-345.762,-88.3141,-60.6193,-257.483,0,-246.646	1/2:19:0,15,4:0:0:15,4:520,121:-50.9777,-8.83708,-4.32163,-42.4276,0,-41.2235	1/1:19:0,19,0:0:0:19,0:662,0:-59.8395,-5.71957,0,-59.8395,-5.71957,-59.8395	1/1:4:0,4,0:0:0:4,0:130,0:-11.9991,-1.20412,0,-11.9991,-1.20412,-11.9991	1/2:11:0,9,2:0:0:9,2:305,70:-29.3236,-4.56501,-1.85574,-25.0427,0,-24.4406	1/2:21:0,8,13:0:0:8,13:284,445:-50.817,-27.8329,-25.4246,-23.3047,0,-19.3913	1/2:288:1,138,149:1:36:138,149:4717,5057:-764.155,-381.932,-343.31,-379.578,0,-337.645	1/2:146:0,84,62:0:0:84,62:2944,2080:-392.626,-153.251,-127.964,-239.701,0,-221.037	1/1:93:0,93,0:0:0:93,0:3197,0:-287.658,-27.9958,0,-287.658,-27.9958,-287.658	1/2:7:0,5,2:0:0:5,2:180,72:-20.1289,-5.41569,-3.91054,-15.0422,0,-14.4402	1/1:236:0,236,0:0:0:236,0:8163,0:-732.961,-71.0431,0,-732.961,-71.0431,-732.961	1/1:87:0,87,0:0:0:87,0:2958,0:-266.228,-26.1896,0,-266.228,-26.1896,-266.228	1/1:190:0,189,0:0:0:189,0:6450,0:-578.148,-56.8947,0,-578.148,-56.8947,-578.148	1/1:116:0,116,0:0:0:116,0:3958,0:-356.031,-34.9195,0,-356.031,-34.9195,-356.031	1/2:83:0,43,40:0:0:43,40:1477,1351:-226.506,-106.593,-93.649,-120.249,0,-108.208	1/2:96:0,49,46:0:0:49,46:1657,1578:-250.037,-115.939,-101.188,-134.071,0,-120.223	1/1:216:0,215,0:0:0:215,0:7462,0:-670.143,-64.7215,0,-670.143,-64.7215,-670.143	1/1:221:0,220,0:0:0:220,0:7575,0:-681.095,-66.2266,0,-681.095,-66.2266,-681.095	1/1:184:0,183,0:0:0:183,0:6282,0:-564.351,-55.0885,0,-564.351,-55.0885,-564.351	1/1:225:0,225,0:0:0:225,0:7858,0:-706.377,-67.7318,0,-706.377,-67.7318,-706.377	1/2:138:0,99,39:0:0:99,39:3464,1357:-381.515,-99.8916,-70.0897,-281.95,0,-270.21	1/1:18:0,18,0:0:0:18,0:607,0:-54.9194,-5.41854,0,-54.9194,-5.41854,-54.9194	1/1:200:0,200,0:0:0:200,0:6919,0:-622.212,-60.206,0,-622.212,-60.206,-622.212	1/1:115:0,115,0:0:0:115,0:3969,0:-357.059,-34.6185,0,-357.059,-34.6185,-357.059	1/2:11:0,4,6:0:0:4,6:142,207:-26.9507,-15.3637,-14.1596,-11.6907,0,-9.88455	1/2:166:0,117,48:0:0:117,48:3983,16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chr12	21971007	.	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chr12	22518711	.	T	A	27815.9	PASS	AB=0.476231;ABP=20.2492;AC=47;AF=0.25;AN=188;AO=1684;CIGAR=1X;DP=6898;DPB=6898;DPRA=1.15912;EPP=3633.76;EPPR=11102.4;GTI=0;LEN=1;MEANALT=1;MQM=59.4062;MQMR=59.9165;NS=94;NUMALT=1;ODDS=4.00221;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=60273;QR=186805;RO=5211;RPL=3;RPP=3633.76;RPPR=11102.4;RPR=1681;RUN=1;SAF=1684;SAP=3659.77;SAR=0;SRF=5211;SRP=11318.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:50:48,0:48:1724:0:0:0,-14.4494,-155.086	0/1:22:16,6:16:576:6:216:-13.1679,0,-45.5523	0/1:141:63,78:63:2251:78:2785:-208.417,0,-160.407	0/0:101:101,0:101:3620:0:0:0,-30.404,-325.983	0/1:21:17,4:17:608:4:144:-6.99158,0,-48.7304	0/1:38:18,20:18:644:20:720:-53.6696,0,-46.8515	0/0:68:68,0:68:2435:0:0:0,-20.47,-219.404	0/1:114:60,54:60:2156:54:1925:-139.115,0,-159.988	0/1:59:27,32:27:972:32:1152:-86.2118,0,-70.0371	0/0:75:75,0:75:2687:0:0:0,-22.5772,-241.917	0/0:111:111,0:111:3980:0:0:0,-33.4143,-358.39	0/1:110:62,48:62:2215:48:1720:-121.937,0,-166.501	0/0:67:67,0:67:2408:0:0:0,-20.169,-216.948	0/0:107:106,1:106:3803:1:26:0,-29.6124,-339.846	0/0:61:61,0:61:2192:0:0:0,-18.3628,-197.545	0/1:76:37,39:37:1319:39:1396:-103.05,0,-96.1329	0/0:54:54,0:54:1936:0:0:0,-16.2556,-174.146	0/0:44:44,0:44:1580:0:0:0,-13.2453,-142.492	0/0:64:64,0:64:2292:0:0:0,-19.2659,-206.524	0/1:83:48,35:48:1728:35:1251:-87.9035,0,-130.82	0/1:147:74,73:74:2660:73:2624:-192.078,0,-195.394	0/0:44:44,0:44:1584:0:0:0,-13.2453,-142.852	0/0:24:24,0:24:864:0:0:0,-7.22472,-78.0817	0/1:18:12,6:12:423:6:216:-14.3696,0,-32.9865	0/1:36:14,22:14:504:22:792:-60.7327,0,-34.861	0/1:182:95,87:95:3416:87:3128:-226.915,0,-252.861	0/0:145:144,0:144:5172:0:0:0,-43.3483,-465.257	0/0:35:35,0:35:1256:0:0:0,-10.536,-113.345	0/1:133:81,52:81:2908:52:1858:-127.431,0,-221.918	0/1:69:41,28:41:1472:28:1004:-69.8413,0,-112.005	0/1:46:23,23:23:816:23:824:-60.6211,0,-59.9143	0/1:10:4,6:4:144:6:207:-15.9566,0,-10.3033	0/0:28:28,0:28:1004:0:0:0,-8.42884,-90.6759	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/1:6:4,2:4:140:2:72:-5.03054,0,-11.1384	0/1:41:24,17:24:860:17:600:-41.7086,0,-65.3796	0/1:136:75,61:75:2696:61:2190:-156.413,0,-201.888	0/1:54:23,31:23:828:31:1116:-84.2593,0,-58.5885	0/0:63:63,0:63:2264:0:0:0,-18.9649,-204.022	0/1:5:1,4:1:36:4:144:-11.7201,0,-2.09312	0/0:60:60,0:60:2144:0:0:0,-18.0618,-193.228	0/0:43:43,0:43:1530:0:0:0,-12.9443,-137.992	0/0:145:145,0:145:5186:0:0:0,-43.6493,-466.878	0/0:57:57,0:57:2052:0:0:0,-17.1587,-184.951	0/1:47:25,22:25:892:22:792:-57.4569,0,-66.4513	0/1:104:48,56:48:1724:56:2008:-149.676,0,-124.138	0/0:83:83,0:83:2971:0:0:0,-24.9855,-267.622	0/0:51:51,0:51:1828:0:0:0,-15.3525,-164.801	0/0:81:81,0:81:2891:0:0:0,-24.3834,-260.426	0/1:126:58,68:58:2088:68:2429:-180.928,0,-150.26	0/1:31:18,13:18:648:13:468:-33.1181,0,-49.3176	0/0:33:33,0:33:1184:0:0:0,-9.93399,-106.868	0/0:116:116,0:116:4136:0:0:0,-34.9195,-372.423	0/0:37:37,0:37:1313:0:0:0,-11.1381,-118.47	0/1:15:9,6:9:324:6:216:-15.2751,0,-24.9904	0/1:115:67,48:67:2404:48:1713:-119.825,0,-181.987	0/0:22:22,0:22:792:0:0:0,-6.62266,-71.6057	0/1:29:14,15:14:504:15:536:-39.8416,0,-36.9682	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/0:74:74,0:74:2642:0:0:0,-22.2762,-238.025	0/1:126:67,59:67:2412:59:2108:-152.024,0,-179.4	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:109:109,0:109:3908:0:0:0,-32.8123,-351.902	0/1:96:52,44:52:1872:44:1565:-112.221,0,-139.86	0/0:88:82,6:82:2944:6:216:0,-6.72175,-245.425	0/1:61:33,28:33:1188:28:1008:-72.6611,0,-88.8658	0/1:148:77,71:77:2755:71:2529:-183.05,0,-203.62	0/0:124:124,0:124:4444:0:0:0,-37.3277,-400.112	0/0:63:62,1:62:2220:1:36:0,-15.3666,-196.466	0/1:44:19,25:19:676:25:898:-67.7689,0,-47.9227	0/1:41:20,21:20:720:21:752:-55.664,0,-52.7865	0/1:30:15,15:15:532:15:532:-39.1735,0,-39.1665	0/0:129:128,1:128:4577:1:36:0,-35.2346,-408.059	0/1:47:21,26:21:752:26:936:-70.3758,0,-53.8578	0/1:101:52,49:52:1872:49:1726:-125.21,0,-138.353	0/0:119:119,0:119:4268:0:0:0,-35.8226,-384.29	0/0:91:91,0:91:3268:0:0:0,-27.3937,-294.309	0/1:103:67,36:67:2387:36:1292:-85.5777,0,-183.711	0/1:29:17,12:17:608:12:432:-30.4775,0,-46.3222	0/0:69:69,0:69:2476:0:0:0,-20.7711,-223.062	0/1:87:65,22:65:2327:22:792:-45.37,0,-183.482	0/0:142:142,0:142:5087:0:0:0,-42.7463,-457.959	0/0:54:54,0:54:1928:0:0:0,-16.2556,-173.791	0/1:102:44,58:44:1584:58:2084:-157.113,0,-112.146	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/0:115:114,1:114:4074:1:36:0,-31.0202,-363.247	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	0/0:55:55,0:55:1972:0:0:0,-16.5566,-177.753	0/1:85:44,41:44:1584:41:1468:-106.685,0,-117.262	0/1:90:47,43:47:1692:43:1544:-112.141,0,-125.474	0/1:229:114,115:114:4096:115:4126:-302.42,0,-299.887	0/1:70:24,46:24:860:46:1648:-127.522,0,-56.6435	0/0:122:121,1:121:4336:1:21:0,-34.6259,-388.281	0/0:82:82,0:82:2944:0:0:0,-24.6845,-265.193
chr12	22606681	.	A	G	155706	PASS	AB=0.470893;ABP=45.6104;AC=142;AF=0.755319;AN=188;AO=7850;CIGAR=1X;DP=10943;DPB=10943;DPRA=0;EPP=17049.1;EPPR=6708.52;GTI=2;LEN=1;MEANALT=1.03191;MQM=59.8845;MQMR=59.9401;NS=94;NUMALT=1;ODDS=1.14581;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=272473;QR=109939;RO=3088;RPL=1;RPP=17040.4;RPPR=6708.52;RPR=7849;RUN=1;SAF=1;SAP=17040.4;SAR=7849;SRF=0;SRP=6708.52;SRR=3088;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:33:0,33:0:0:33:1129:-101.91,-9.93399,0	0/1:152:80,72:80:2841:72:2537:-182.825,0,-210.171	0/1:163:90,73:90:3203:73:2546:-180.322,0,-239.426	1/1:295:0,295:0:0:295:10390:-934.513,-88.8039,0	0/1:106:63,43:63:2209:43:1479:-101.476,0,-167.162	0/1:87:48,39:48:1715:39:1378:-98.1276,0,-128.445	1/1:205:0,205:0:0:205:7133:-642.041,-61.7112,0	0/1:145:82,63:82:2888:63:2212:-155.694,0,-216.503	0/1:110:64,46:64:2292:46:1588:-110.089,0,-173.413	1/1:48:0,48:0:0:48:1666:-150.205,-14.4494,0	1/1:118:0,118:0:0:118:4093:-368.56,-35.5215,0	0/1:100:57,43:57:2017:43:1435:-99.3312,0,-151.698	1/1:70:0,70:0:0:70:2398:-216.066,-21.0721,0	1/1:94:2,92:2:72:92:3084:-270.952,-21.4601,0	1/1:65:0,65:0:0:65:2209:-199.068,-19.567,0	0/1:70:39,31:39:1387:31:1054:-74.0899,0,-104.056	1/1:82:0,82:0:0:82:2722:-245.223,-24.6845,0	1/1:80:0,80:0:0:80:2778:-250.26,-24.0824,0	1/1:53:0,53:0:0:53:1825:-164.526,-15.9546,0	0/1:289:145,143:145:5187:143:4949:-358.508,0,-379.913	0/1:177:93,84:93:3320:84:2946:-211.772,0,-245.628	1/1:105:0,105:0:0:105:3689:-332.214,-31.6082,0	1/1:121:1,119:1:36:119:4160:-370.98,-32.8852,0	1/1:131:12,119:12:432:119:4123:-332.036,-0.213733,0	0/1:69:49,20:49:1755:20:707:-43.1835,0,-137.462	0/1:404:196,208:196:6986:208:7275:-533.189,0,-507.055	1/1:232:0,232:0:0:232:8049:-724.143,-69.839,0	1/1:32:0,32:0:0:32:1111:-100.294,-9.63296,0	0/1:527:263,264:263:9429:264:9270:-675.623,0,-689.923	0/1:170:89,81:89:3162:81:2851:-205.653,0,-233.613	0/1:177:92,85:92:3244:85:2895:-207.498,0,-238.9	0/1:6:5,1:5:180:1:36:-1.79209,0,-14.7459	1/1:31:0,31:0:0:31:1108:-100.031,-9.33193,0	1/1:8:0,8:0:0:8:273:-24.9002,-2.40824,0	0/1:10:7,3:7:252:3:108:-7.06487,0,-20.0187	0/1:11:6,5:6:216:5:180:-13.2407,0,-16.4792	0/1:203:102,101:102:3638:101:3491:-253.182,0,-266.515	0/1:207:110,97:110:3927:97:3396:-243.272,0,-291.152	1/1:103:0,103:0:0:103:3515:-316.494,-31.0061,0	0/1:5:2,3:2:72:3:99:-7.73143,0,-5.33157	1/1:184:0,184:0:0:184:6412:-577.161,-55.3895,0	1/1:54:0,54:0:0:54:1871:-168.667,-16.2556,0	1/1:143:0,143:0:0:143:4970:-447.448,-43.0473,0	1/1:78:0,78:0:0:78:2709:-244.057,-23.4803,0	0/1:51:27,24:27:918:24:828:-59.4806,0,-67.5713	0/1:102:58,44:58:2066:44:1533:-107.552,0,-155.487	1/1:102:0,102:0:0:102:3597:-323.929,-30.7051,0	1/1:163:0,163:0:0:163:5686:-511.83,-49.0679,0	1/1:119:0,119:0:0:119:4146:-373.326,-35.8226,0	0/1:159:75,84:75:2679:84:2965:-219.217,0,-193.491	0/1:197:95,102:95:3395:102:3538:-259.327,0,-246.462	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	1/1:179:0,179:0:0:179:6192:-557.01,-53.8844,0	1/1:59:0,59:0:0:59:2076:-187.109,-17.7608,0	0/1:8:3,5:3:104:5:176:-13.7768,0,-7.29457	0/1:217:126,91:126:4472:91:3138:-216.336,0,-337.3	1/1:26:0,26:0:0:26:917:-82.8258,-7.82678,0	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.3823	1/1:22:0,22:0:0:22:763:-68.9885,-6.62266,0	1/1:140:0,140:0:0:140:4846:-436.281,-42.1442,0	0/1:147:86,61:86:3053:61:2122:-146.995,0,-230.748	1/1:6:0,6:0:0:6:207:-18.9669,-1.80618,0	1/1:212:0,212:0:0:212:7383:-664.532,-63.8184,0	0/1:210:112,98:112:4002:98:3434:-246.054,0,-297.152	1/1:80:3,77:3:104:77:2674:-231.2,-14.3796,0	0/1:101:40,61:40:1388:61:2126:-161.199,0,-94.8074	0/1:90:48,42:48:1713:42:1494:-107.661,0,-127.361	1/1:134:3,131:3:108:131:4570:-401.152,-30.2629,0	1/1:54:1,53:1:36:53:1841:-162.367,-12.6573,0	0/1:105:55,50:55:1963:50:1726:-124.01,0,-145.336	0/1:93:47,46:47:1688:46:1588:-115.209,0,-124.211	0/1:22:7,15:7:248:15:540:-42.3139,0,-16.0415	1/1:143:1,139:1:27:139:4855:-434.351,-39.7335,0	0/1:54:24,30:24:856:30:1033:-77.0192,0,-61.1055	0/1:270:140,130:140:4995:130:4567:-329.885,0,-367.059	1/1:190:0,190:0:0:190:6638:-597.473,-57.1957,0	1/1:93:0,93:0:0:93:3268:-294.342,-27.9958,0	0/1:90:51,39:51:1806:39:1316:-91.6368,0,-135.725	0/1:17:8,9:8:284:9:309:-23.0232,0,-20.7858	1/1:153:0,153:0:0:153:5296:-476.784,-46.0576,0	0/1:164:105,59:105:3732:59:2023:-132.968,0,-286.712	1/1:297:2,295:2:72:295:10250:-915.6,-82.5692,0	1/1:114:0,114:0:0:114:3906:-351.736,-34.3174,0	0/1:68:33,35:33:1175:35:1215:-89.1772,0,-85.5869	1/1:81:0,81:0:0:81:2733:-246.202,-24.3834,0	1/1:126:1,125:1:36:125:4278:-381.565,-34.3315,0	0/1:36:14,22:14:504:22:765:-58.3306,0,-34.861	1/1:69:0,69:0:0:69:2290:-206.339,-20.7711,0	0/1:81:36,45:36:1273:45:1530:-113.601,0,-90.4875	0/1:86:50,36:50:1783:36:1225:-84.6583,0,-134.863	0/1:165:92,73:92:3292:73:2544:-179.525,0,-246.724	0/1:60:42,18:42:1491:18:600:-36.2514,0,-116.422	1/1:122:0,122:0:0:122:4192:-377.457,-36.7257,0	1/1:98:0,98:0:0:98:3361:-302.708,-29.5009,0
chr12	22719145	.	T	A	67688.3	PASS	AB=0.271441;ABP=11774.5;AC=92;AF=0.489362;AN=188;AO=7068;CIGAR=1X;DP=26255;DPB=26255;DPRA=0;EPP=15351;EPPR=41421.9;GTI=30;LEN=1;MEANALT=1.15957;MQM=38.4938;MQMR=58.3928;NS=94;NUMALT=1;ODDS=1.46503;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=251006;QR=682186;RO=19166;RPL=2;RPP=15333.6;RPPR=1841.25;RPR=7066;RUN=1;SAF=2;SAP=15333.6;SAR=7066;SRF=7546;SRP=1883.47;SRR=11620;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:139:95,44:95:3369:44:1548:-87.809,0,-261.584	0/1:407:316,91:316:11168:91:3249:-151.058,0,-880.86	0/1:375:316,59:316:11275:59:2079:-60.7548,0,-900.062	0/1:584:410,173:410:14617:173:6141:-347.456,0,-1139.41	0/1:192:167,25:167:5947:25:872:-17.9949,0,-474.697	0/1:174:144,30:144:5118:30:1076:-38.5455,0,-405.764	0/1:301:183,118:183:6534:118:4207:-265.442,0,-497.534	0/1:446:340,106:340:12110:106:3768:-180.202,0,-952.178	0/1:329:284,45:284:10113:45:1585:-35.1252,0,-805.501	0/1:300:195,105:195:6966:105:3708:-226.508,0,-536.696	0/1:166:126,40:126:4481:40:1419:-68.7119,0,-353.489	0/1:246:211,35:211:7488:35:1248:-30.5665,0,-598.136	0/1:193:144,48:144:5119:48:1701:-85.0109,0,-402.699	0/1:207:149,58:149:5289:58:2067:-112.659,0,-413.836	0/1:181:127,53:127:4524:53:1879:-105.07,0,-352.829	0/1:169:152,17:152:5398:17:612:-2.12366,0,-434.377	0/1:191:125,66:125:4446:66:2363:-140.153,0,-342.816	0/1:181:119,62:119:4202:62:2189:-130.441,0,-323.877	0/1:75:51,23:51:1811:23:820:-46.4822,0,-140.635	0/1:485:420,65:420:14953:65:2324:-52.735,0,-1195	0/1:486:411,75:411:14617:75:2659:-82.1699,0,-1164.69	0/1:253:151,102:151:5371:102:3650:-234.324,0,-407.362	0/1:220:180,40:180:6422:40:1428:-55.8058,0,-511.843	0/1:268:140,128:140:4982:128:4564:-310.943,0,-367.547	0/1:233:195,38:195:6939:38:1334:-43.0974,0,-553.116	0/1:985:789,196:789:28135:196:6918:-297.447,0,-2225.92	0/1:549:381,165:381:13570:165:5873:-332.777,0,-1056.37	0/1:125:89,36:89:3160:36:1292:-72.8839,0,-246.995	0/1:727:616,109:616:21975:109:3853:-114.316,0,-1751.35	0/1:420:292,127:292:10381:127:4519:-259.712,0,-803.044	0/1:372:316,56:316:11266:56:2000:-57.711,0,-897.5	0/1:28:23,5:23:824:5:180:-7.46182,0,-65.9846	0/1:17:10,7:10:360:7:248:-16.7002,0,-27.6268	0/1:16:9,7:9:320:7:248:-15.3687,0,-24.3259	0/1:15:11,4:11:396:4:144:-8.01867,0,-31.3971	0/1:22:17,5:17:597:5:172:-8.43614,0,-47.4335	0/1:574:486,88:486:17243:88:3118:-93.5937,0,-1373.27	0/1:553:417,136:417:14768:136:4814:-244.895,0,-1156.62	0/1:134:87,47:87:3124:47:1670:-100.975,0,-240.978	0/1:7:5,2:5:180:2:72:-3.77395,0,-14.4449	0/1:333:201,132:201:7175:132:4654:-296.984,0,-545.565	0/1:73:46,27:46:1647:27:964:-60.6548,0,-126.543	0/1:485:301,184:301:10737:184:6542:-412.506,0,-820.24	0/1:188:149,39:149:5318:39:1388:-62.8527,0,-422.161	0/1:212:180,32:180:6397:32:1144:-33.9006,0,-510.412	0/1:241:199,42:199:7100:42:1508:-57.3858,0,-563.693	0/1:423:226,197:226:8008:197:6982:-461.057,0,-593.409	0/1:603:310,293:310:11089:293:10439:-707.861,0,-816.38	0/1:278:166,112:166:5931:112:3987:-253.062,0,-450.213	0/1:446:388,58:388:13845:58:2065:-39.9197,0,-1107.81	0/1:341:271,70:271:9595:70:2488:-110.005,0,-757.994	0/1:37:12,25:12:423:25:887:-64.1555,0,-27.267	0/1:344:187,157:187:6669:157:5634:-365.243,0,-496.726	0/1:151:75,76:75:2688:76:2723:-189.472,0,-196.709	0/1:44:14,30:14:500:30:1075:-77.6456,0,-31.6194	0/1:415:336,79:336:11981:79:2822:-115.952,0,-950.269	0/1:147:120,27:120:4266:27:972:-39.1719,0,-339.869	0/1:32:22,10:22:784:10:352:-21.1954,0,-61.1811	0/1:58:37,21:37:1328:21:738:-46.7612,0,-102.362	0/1:241:138,103:138:4878:103:3655:-242.354,0,-366.628	0/1:312:253,58:253:8991:58:2054:-80.306,0,-711.327	0/1:11:9,2:9:309:2:72:-3.19351,0,-24.8294	0/1:511:308,202:308:10965:202:7174:-457.224,0,-832.864	0/1:618:498,118:498:17670:118:4178:-167.297,0,-1398.45	0/1:202:123,79:123:4389:79:2813:-181.068,0,-334.269	0/1:260:231,29:231:8211:29:1028:-9.41233,0,-655.552	0/1:522:439,81:439:15667:81:2899:-91.227,0,-1247.83	0/1:372:232,140:232:8265:140:4959:-309.34,0,-631.838	0/0:96:89,7:89:3172:7:229:0,-9.0892,-265.896	0/1:226:183,43:183:6510:43:1504:-57.052,0,-516.774	0/1:276:213,63:213:7584:63:2230:-107.428,0,-596.382	0/1:48:34,14:34:1203:14:504:-28.2946,0,-94.0558	0/1:357:158,199:158:5646:199:7045:-483.974,0,-400.723	0/1:191:165,26:165:5857:26:927:-20.7112,0,-468.651	0/1:545:408,135:408:14469:135:4773:-244.908,0,-1134.4	0/1:304:218,86:218:7789:86:3080:-170.525,0,-609.527	0/1:441:246,195:246:8763:195:6927:-446.35,0,-655.908	0/1:250:192,58:192:6821:58:2080:-100.333,0,-535.742	0/1:39:30,9:30:1050:9:324:-15.2829,0,-82.5239	0/1:335:158,177:158:5646:177:6272:-436.095,0,-407.346	0/1:340:285,55:285:10155:55:1963:-63.606,0,-808.8	0/1:744:446,298:446:15898:298:10602:-678.717,0,-1206.54	0/1:257:165,92:165:5868:92:3279:-203.48,0,-450.869	0/1:201:174,27:174:6157:27:968:-22.083,0,-492.371	0/1:241:179,62:179:6338:62:2198:-115.968,0,-497.968	0/1:397:278,119:278:9944:119:4193:-235.1,0,-775.389	0/1:105:86,19:86:3080:19:680:-24.8563,0,-244.126	0/1:202:147,55:147:5230:55:1902:-98.0301,0,-410.032	0/0:216:196,19:196:7007:19:676:0,-7.33483,-570.816	0/1:124:106,17:106:3804:17:599:-14.1449,0,-304.614	0/1:246:214,32:214:7603:32:1126:-21.9982,0,-607.481	0/1:225:196,29:196:6950:29:1018:-19.351,0,-555.143	0/1:303:212,91:212:7561:91:3229:-184.695,0,-589.32	0/1:301:218,82:218:7697:82:2871:-156.36,0,-602.135
chr12	22719150	.	A	G	106163	PASS	AB=0.339654;ABP=5856.74;AC=93;AF=0.494681;AN=188;AO=8910;CIGAR=1X;DP=26309;DPB=26309;DPRA=0;EPP=19350.8;EPPR=37550.3;GTI=12;LEN=1;MEANALT=1.06383;MQM=39.4456;MQMR=59.9814;NS=94;NUMALT=1;ODDS=3.06897;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=315088;QR=618083;RO=17391;RPL=3;RPP=19324.8;RPPR=664.104;RPR=8907;RUN=1;SAF=3;SAP=19324.8;SAR=8907;SRF=7520;SRP=693.147;SRR=9871;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:144:98,46:98:3473:46:1615:-91.8925,0,-269.434	0/1:418:298,120:298:10629:120:4234:-235.319,0,-830.69	0/1:374:293,81:293:10408:81:2862:-130.056,0,-824.059	0/1:584:409,173:409:14570:173:6139:-345.81,0,-1135.64	0/1:188:121,66:121:4281:66:2355:-149.151,0,-328.819	0/1:176:106,70:106:3766:70:2488:-162.567,0,-286.157	0/1:304:185,119:185:6609:119:4224:-265.414,0,-503.377	0/1:442:288,154:288:10234:154:5421:-328.626,0,-787.937	0/1:324:202,122:202:7203:122:4299:-276.066,0,-550.792	0/1:304:198,105:198:7079:105:3705:-225.21,0,-545.616	0/1:167:125,42:125:4475:42:1475:-74.0699,0,-352.647	0/1:248:188,60:188:6636:60:2085:-104.459,0,-522.671	0/1:191:142,49:142:5063:49:1726:-87.7074,0,-398.32	0/1:208:148,60:148:5268:60:2116:-117.565,0,-411.643	0/1:181:127,54:127:4502:54:1911:-107.56,0,-350.866	0/1:168:139,29:139:4955:29:1044:-40.3584,0,-395.528	0/1:191:125,66:125:4442:66:2323:-137.245,0,-342.454	0/1:181:118,63:118:4219:63:2243:-135.056,0,-325.404	0/1:74:50,24:50:1784:24:856:-49.89,0,-138.567	0/1:485:357,128:357:12709:128:4507:-245.312,0,-997.638	0/1:491:350,141:350:12458:141:4993:-285.887,0,-973.254	0/1:256:155,101:155:5524:101:3576:-227.529,0,-420.225	0/1:220:179,41:179:6381:41:1460:-58.6542,0,-508.154	0/1:266:134,132:134:4716:132:4699:-323.34,0,-344.529	0/1:228:171,57:171:6081:57:2016:-103.882,0,-478.758	0/1:979:663,315:663:23643:315:11133:-669.153,0,-1832.4	0/1:552:385,166:385:13661:166:5838:-329.044,0,-1063.07	0/1:124:89,35:89:3153:35:1244:-70.1894,0,-246.668	0/1:722:515,207:515:18314:207:7330:-421.454,0,-1430.23	0/1:431:227,204:227:8070:204:7261:-496.494,0,-596.576	0/1:376:255,121:255:9030:121:4236:-254.667,0,-699.47	0/1:29:23,6:23:820:6:216:-10.3308,0,-65.3926	0/1:17:10,7:10:352:7:239:-15.991,0,-26.9007	0/1:16:9,7:9:324:7:239:-14.9763,0,-24.6894	0/1:15:10,5:10:352:5:180:-11.1902,0,-27.5027	0/1:22:17,5:17:604:5:180:-8.9603,0,-48.0679	0/1:580:419,161:419:14873:161:5697:-319.671,0,-1163.45	0/1:547:332,215:332:11836:215:7605:-492.851,0,-900.372	0/1:132:85,47:85:3052:47:1669:-101.594,0,-235.103	0/1:8:6,2:6:216:2:72:-3.47292,0,-17.3823	0/1:337:200,135:200:7104:135:4764:-305.603,0,-538.216	0/1:73:47,26:47:1680:26:927:-57.855,0,-129.512	0/1:489:303,186:303:10772:186:6600:-416.582,0,-822.186	0/1:189:148,41:148:5291:41:1460:-68.8719,0,-419.431	0/1:212:157,55:157:5558:55:1869:-98.3647,0,-436.403	0/1:243:160,83:160:5714:83:2943:-183.325,0,-441.172	0/1:418:223,195:223:7941:195:6935:-457.828,0,-588.885	0/1:603:311,292:311:11024:292:10380:-702.966,0,-810.542	0/1:276:164,112:164:5836:112:3968:-252.412,0,-442.27	0/1:441:331,110:331:11747:110:3902:-204.562,0,-924.35	0/1:337:225,112:225:7989:112:3995:-243.973,0,-617.589	0/1:36:12,24:12:413:24:860:-61.8267,0,-26.6607	0/1:347:186,161:186:6615:161:5699:-372.814,0,-490.975	0/1:150:75,75:75:2663:75:2667:-185.596,0,-194.762	0/1:45:11,34:11:388:34:1196:-87.9913,0,-21.7028	0/1:419:296,123:296:10540:123:4353:-250.132,0,-822.389	0/1:141:114,27:114:4060:27:946:-39.1655,0,-323.144	0/1:34:22,12:22:788:12:424:-26.8873,0,-61.0098	0/1:58:37,21:37:1293:21:719:-45.2428,0,-99.209	0/1:242:140,102:140:4975:102:3615:-238.656,0,-375.05	0/1:312:199,113:199:7083:113:4017:-253.864,0,-543.611	0/1:11:9,2:9:320:2:68:-2.90608,0,-25.831	0/1:515:310,205:310:11014:205:7275:-464.407,0,-836.128	0/1:619:408,211:408:14472:211:7467:-452.633,0,-1115.9	0/1:201:121,80:121:4293:80:2829:-182.55,0,-326.042	0/1:264:197,67:197:6998:67:2354:-124.494,0,-549.791	0/1:528:366,162:366:13025:162:5754:-340.451,0,-1013.12	0/1:382:241,141:241:8594:141:4956:-307.076,0,-658.375	0/0:97:90,7:90:3210:7:244:0,-8.42171,-268.344	0/1:219:157,62:157:5548:62:2202:-120.12,0,-433.523	0/1:277:168,109:168:5995:109:3850:-249.492,0,-456.143	0/1:46:31,15:31:1112:15:527:-31.2005,0,-86.544	0/1:364:157,207:157:5559:207:7267:-501.792,0,-390.863	0/1:188:149,39:149:5297:39:1392:-62.6683,0,-420.271	0/1:552:359,193:359:12600:193:6817:-423.957,0,-967.681	0/1:302:215,87:215:7586:87:3095:-172.836,0,-591.874	0/1:446:249,197:249:8828:197:6953:-448.127,0,-660.252	0/1:259:156,103:156:5573:103:3665:-237.554,0,-423.726	0/1:41:23,18:23:820:18:635:-42.2731,0,-61.7803	0/1:335:156,179:156:5559:179:6262:-436.443,0,-399.591	0/1:337:238,99:238:8462:99:3516:-201.752,0,-660.139	0/1:744:447,297:447:15880:297:10481:-670.02,0,-1204.94	0/1:255:163,92:163:5780:92:3270:-203.409,0,-443.554	0/1:201:152,49:152:5398:49:1718:-88.8377,0,-425.445	0/1:243:181,62:181:6451:62:2203:-115.997,0,-507.529	0/1:400:277,123:277:9812:123:4329:-246.131,0,-762.624	0/1:104:62,42:62:2206:42:1477:-95.9626,0,-167.497	0/1:200:143,57:143:5037:57:1995:-107.206,0,-393.275	0/1:217:170,47:170:6045:47:1621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chr12	22719155	.	ACATC	GCATG,ACGTC	147820	PASS	AB=0.329341,0.27042;ABP=5495.02,6387.16;AC=60,41;AF=0.319149,0.218085;AN=188;AO=7150,3771;CIGAR=1X3M1X,2M1X2M;DP=21710;DPB=21883.8;DPRA=0,0;EPP=15529,8087.73;EPPR=19144.8;GTI=10;LEN=5,1;MEANALT=2.98936,3.98113;MQM=38.5103,59.9576;MQMR=59.9886;NS=94;NUMALT=2;ODDS=0.685623;PAIRED=0,0;PAIREDR=0;PAO=845,1.83333;PQA=29626,33.6667;PQR=170.667;PRO=5.83333;QA=250665,133662;QR=313138;RO=8883;RPL=0,894;RPP=15529,2267.36;RPPR=6743.3;RPR=7150,2877;RUN=1,1;SAF=0,882;SAP=15529,2322.5;SAR=7150,2889;SRF=1799;SRP=6830.87;SRR=7084;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:108:62,45,0:62:2179:45,0:1532,0:-97.0562,0,-163.86,-115.72,-177.407,-293.097	0/2:361:131,93,109:131:4604:93,109:3237,3908:-279.32,-73.075,-419.821,0,-129.071,-341.942	0/2:255:69,61,101:69:2446:61,101:2142,3584:-271.249,-130.004,-310.91,0,-37.2636,-168.874	0/1:459:283,175,0:283:9960:175,0:6119,0:-384.096,0,-758.184,-469.287,-810.864,-1280.12	0/2:156:33,25,56:33:1182:25,56:869,1993:-152.499,-95.0352,-183.907,0,-29.0027,-79.542	0/2:150:36,31,44:36:1285:31,44:1091,1567:-116.888,-44.64,-140.069,0,-21.6802,-91.5198	0/1:232:110,119,1:110:3827:119,1:4127,36:-281.946,0,-275.382,-312.121,-308.267,-623.003	1/2:355:83,105,114:83:2938:105,114:3673,4054:-342.796,-91.0611,-298.769,-37.3967,0,-242.402	0/2:261:45,46,88:45:1609:46,88:1584,3093:-238.213,-131.065,-248.416,0,-10.5081,-104.71	0/1:223:116,105,0:116:4093:105,0:3670,0:-247.512,0,-301.75,-282.432,-333.358,-615.731	0/1:132:91,39,0:91:3184:39,0:1361,0:-76.5836,0,-247.39,-103.977,-259.13,-363.036	0/2:151:53,35,35:53:1872:35,35:1211,1241:-85.1545,-9.49896,-151.415,0,-60.8481,-141.924	0/1:142:92,50,0:92:3235:50,0:1764,0:-105.968,0,-248.631,-133.662,-263.682,-397.007	0/1:165:105,59,0:105:3708:59,0:2066,0:-127.073,0,-284.257,-158.682,-302.018,-460.66	0/1:134:79,55,0:79:2792:55,0:1944,0:-124.982,0,-211.183,-148.764,-227.74,-376.162	0/2:109:46,18,33:46:1624:18,33:628,1184:-82.7316,-47.7357,-174.564,0,-83.4053,-122.315	0/1:152:86,64,0:86:3044:64,0:2229,0:-143.589,0,-228.78,-169.478,-248.046,-417.443	0/1:160:96,63,0:96:3379:63,0:2222,0:-140.067,0,-256.161,-168.966,-275.126,-444.055	0/1:59:35,24,0:35:1227:24,0:849,0:-54.0075,0,-92.9715,-64.5435,-100.196,-164.401	0/2:383:113,65,138:113:4009:65,138:2311,4873:-362.819,-218.849,-525.916,0,-148.651,-285.095	0/2:362:90,74,128:90:3196:74,128:2601,4546:-343.332,-168.587,-406.729,0,-58.5835,-221.889	0/1:255:150,103,0:150:5276:103,0:3600,0:-231.816,0,-398.472,-276.971,-429.479,-706.462	0/1:157:116,39,0:116:4051:39,0:1378,0:-71.6942,0,-317.799,-106.614,-329.54,-436.14	0/1:227:84,128,9:84:2966:128,9:4472,324:-321.302,0,-203.007,-320.15,-215.102,-558.983	0/2:163:45,38,59:45:1593:38,59:1332,2111:-158.6,-70.9897,-189.31,0,-28.6073,-112.003	0/2:969:328,195,322:328:11599:195,322:6866,11419:-831.581,-398.826,-1284.78,0,-413.167,-847.729	0/1:415:246,169,0:246:8666:169,0:5921,0:-378.302,0,-654.661,-452.356,-705.535,-1157.91	0/1:90:53,35,0:53:1877:35,0:1243,0:-80.5376,0,-142.429,-96.4922,-152.965,-249.403	0/2:721:274,112,238:274:9669:112,238:3904,8443:-605.148,-383.135,-1136.72,0,-482.812,-715.663	0/1:370:99,127,67:99:3433:127,67:4489,2378:-316.198,0,-240.807,-152.244,-85.2824,-411.115	0/2:305:95,57,90:95:3341:57,90:2001,3184:-230.744,-105.662,-360.464,0,-118.284,-244.871	0/1:19:10,5,3:10:346:5,3:180,108:-11.0268,0,-26.606,-5.2235,-19.2977,-32.4337	0/1:14:7,7,0:7:252:7,0:249,0:-17.6919,0,-18.8145,-19.7991,-20.9217,-40.3698	0/1:16:9,6,0:9:317:6,0:212,0:-12.2291,0,-24.0871,-14.9384,-25.8932,-40.7747	0/1:13:5,4,3:5:179:4,3:144,108:-9.47652,0,-13.3933,-2.16252,-5.78414,-15.865	1/2:13:1,5,7:1:36:5,7:180,248:-30.6914,-17.2597,-18.6927,-10.7806,0,-11.6143	0/2:564:189,87,212:189:6601:87,212:3062,7451:-549.394,-370.46,-881.213,0,-301.119,-473.129	1/2:484:119,139,137:119:4199:139,137:4880,4875:-395.37,-55.4582,-355.467,-33.8784,0,-334.493	0/1:104:56,47,0:56:1963:47,0:1657,0:-109.976,0,-145.614,-126.834,-159.762,-286.513	0/1:5:3,2,0:3:104:2,0:70,0:-3.96908,0,-7.85512,-4.87217,-8.45718,-13.3357	0/1:287:147,138,1:147:5177:138,1:4846,36:-328.443,0,-379.925,-369.756,-418.53,-790.94	0/1:50:23,26,0:23:814:26,0:914,0:-63.4963,0,-58.4853,-70.42,-66.3121,-136.733	0/1:427:238,185,2:238:8389:185,2:6498,72:-428.603,0,-627.338,-494.373,-677.154,-1176.81	0/1:138:97,40,0:97:3417:40,0:1417,0:-80.5109,0,-266.146,-109.711,-278.187,-387.915	0/2:165:59,33,49:59:2085:33,49:1149,1724:-122.455,-51.8772,-211.75,0,-81.4722,-155.061	0/2:244:64,44,93:64:2244:44,93:1545,3244:-244.517,-143.717,-313.078,0,-62.544,-154.613	0/1:385:184,196,3:184:6489:196,3:6900,108:-467.856,0,-469.37,-514.432,-519.559,-1041.9	0/1:484:189,295,0:189:6619:295,0:10405,0:-743.208,0,-450.103,-800.103,-538.907,-1338.67	0/1:234:122,110,0:122:4313:110,0:3868,0:-257.78,0,-318.171,-294.506,-351.284,-645.791	0/2:344:104,56,126:104:3681:56,126:1980,4454:-331.447,-211.623,-494.6,0,-148.707,-261.909	0/2:334:84,69,136:84:2917:69,136:2400,4837:-368.912,-208.777,-425.138,0,-51.7154,-196.197	0/1:35:10,25,0:10:353:25,0:877,0:-64.1209,0,-21.5725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chr12	22719169	.	T	C	94168.4	PASS	AB=0.376435;ABP=2509.63;AC=94;AF=0.5;AN=188;AO=7115;CIGAR=1X;DP=18901;DPB=18901;DPRA=0;EPP=15013.2;EPPR=24912.1;GTI=0;LEN=1;MEANALT=1.05319;MQM=38.5687;MQMR=57.3313;NS=94;NUMALT=1;ODDS=75.6256;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=254497;QR=420480;RO=11781;RPL=7064;RPP=15013.2;RPPR=24912.1;RPR=51;RUN=1;SAF=0;SAP=15453;SAR=7115;SRF=0;SRP=25585.1;SRR=11781;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:102:57,45:57:2048:45:1597:-102.697,0,-153.887	0/1:333:243,90:243:8678:90:3224:-170.196,0,-678.899	0/1:223:161,62:161:5709:62:2228:-118.749,0,-445.202	0/1:386:211,175:211:7541:175:6252:-414.741,0,-562.533	0/1:152:127,25:127:4564:25:898:-31.5749,0,-362.173	0/1:137:106,31:106:3785:31:1116:-52.783,0,-297.055	0/1:207:86,120:86:3047:120:4298:-301.12,0,-212.238	0/1:331:225,106:225:8022:106:3763:-213.96,0,-618.773	0/1:248:204,44:204:7298:44:1580:-58.7474,0,-576.529	0/1:204:103,101:103:3655:101:3617:-247.284,0,-267.741	0/1:93:51,42:51:1798:42:1497:-97.9005,0,-134.102	0/1:124:89,35:89:3196:35:1252:-67.5494,0,-248.756	0/1:112:63,49:63:2260:49:1741:-112.831,0,-169.947	0/1:145:85,60:85:3045:60:2156:-139.934,0,-230.628	0/1:119:65,54:65:2336:54:1940:-128.478,0,-174.677	0/1:91:73,18:73:2605:18:636:-27.8786,0,-206.501	0/1:134:69,65:69:2454:65:2340:-155.106,0,-180.773	0/1:147:82,65:82:2933:65:2336:-152.746,0,-219.951	0/1:53:29,24:29:1044:24:855:-56.1387,0,-78.3202	0/1:360:294,65:294:10485:65:2340:-91.5188,0,-830.525	0/1:343:271,72:271:9683:72:2588:-119.241,0,-762.57	0/1:187:83,104:83:2972:104:3717:-260.221,0,-211.42	0/1:129:89,40:89:3162:40:1436:-83.7121,0,-245.9	0/1:207:80,127:80:2880:127:4545:-327.524,0,-196.774	0/1:150:112,38:112:3979:38:1344:-67.8662,0,-311.853	0/1:678:482,196:482:17135:196:7032:-397.761,0,-1328.89	0/1:365:198,167:198:7095:167:5957:-394.916,0,-528.732	0/1:77:42,35:42:1504:35:1260:-85.2737,0,-112.475	0/1:504:392,112:392:13925:112:3990:-192.884,0,-1093.55	0/1:346:220,126:220:7835:126:4515:-281.628,0,-596.042	0/1:272:215,57:215:7686:57:2039:-91.2634,0,-605.448	0/1:19:14,5:14:500:5:180:-10.1711,0,-39.5465	0/1:13:6,7:6:216:7:252:-18.1953,0,-15.8771	0/1:16:9,7:9:324:7:248:-15.1702,0,-24.6894	0/1:12:8,4:8:288:4:140:-8.65826,0,-22.5845	0/1:10:5,5:5:180:5:180:-12.5727,0,-13.5418	0/1:389:304,85:304:10849:85:3056:-143.35,0,-853.608	0/1:454:315,139:315:11285:139:4956:-287.167,0,-872.713	0/1:88:41,47:41:1449:47:1673:-114.81,0,-104.144	0/1:4:2,2:2:72:2:68:-4.59957,0,-5.6326	0/1:253:120,133:120:4312:133:4750:-329.086,0,-312.094	0/1:47:20,27:20:716:27:957:-67.614,0,-50.6193	0/1:379:194,185:194:6941:185:6633:-451.35,0,-510.663	0/1:119:79,40:79:2795:40:1424:-86.7051,0,-215.964	0/1:147:114,33:114:4013:33:1180:-56.5649,0,-315.19	0/1:178:135,43:135:4848:43:1533:-78.6493,0,-379.781	0/1:369:174,195:174:6210:195:6978:-476.15,0,-447.915	0/1:457:166,291:166:5938:291:10421:-749.64,0,-396.954	0/1:218:107,111:107:3825:111:3984:-270.375,0,-278.821	0/1:307:249,58:249:8872:58:2073:-82.4016,0,-702.237	0/1:236:166,70:166:5900:70:2501:-142.018,0,-457.328	0/1:34:8,26:8:284:26:936:-69.0186,0,-15.6683	0/1:253:95,158:95:3359:158:5672:-397.704,0,-226.364	0/1:110:33,77:33:1173:77:2726:-202.429,0,-72.7623	0/1:45:14,31:14:504:31:1116:-80.5799,0,-31.6803	0/1:298:216,82:216:7756:82:2923:-159.889,0,-605.007	0/1:89:62,27:62:2205:27:955:-55.59,0,-171.922	0/1:30:19,11:19:684:11:396:-25.4859,0,-52.7895	0/1:52:32,20:32:1148:20:716:-46.5846,0,-87.9763	0/1:168:65,103:65:2324:103:3669:-265.382,0,-158.847	0/1:211:152,59:152:5449:59:2124:-116.522,0,-422.993	0/1:8:6,2:6:216:2:72:-4.0966,0,-17.3823	0/1:406:202,204:202:7170:204:7286:-497.441,0,-523.135	0/1:506:383,123:383:13570:123:4401:-218.66,0,-1058.36	0/1:163:84,79:84:3005:79:2844:-194.244,0,-221.506	0/1:170:138,32:138:4956:32:1152:-46.6326,0,-389.368	0/1:388:308,80:308:10984:80:2880:-129.23,0,-865.848	0/1:251:110,141:110:3899:141:5034:-350.623,0,-275.543	0/1:43:36,7:36:1292:7:252:-8.38541,0,-103.639	0/1:169:126,43:126:4490:43:1529:-76.0337,0,-352.196	0/1:222:157,65:157:5601:65:2340:-132.495,0,-434.53	0/1:36:22,14:22:792:14:500:-31.6325,0,-60.6288	0/1:269:66,203:66:2361:203:7245:-526.515,0,-131.7	0/1:123:96,26:96:3425:26:932:-41.6617,0,-270.429	0/1:439:301,138:301:10766:138:4926:-289.787,0,-832.5	0/1:215:126,88:126:4494:88:3149:-203.713,0,-339.965	0/1:329:133,196:133:4735:196:7028:-487.848,0,-327.267	0/1:202:142,60:142:5059:60:2152:-120.881,0,-391.613	0/1:41:32,9:32:1137:9:324:-14.6809,0,-89.7501	0/1:282:104,178:104:3721:178:6377:-459.994,0,-250.129	0/1:219:163,56:163:5825:56:2004:-103.323,0,-455.366	0/1:599:307,292:307:10910:292:10389:-704.602,0,-801.483	0/1:200:106,94:106:3785:94:3361:-227.525,0,-280.642	0/1:128:101,27:101:3616:27:957:-43.4446,0,-285.702	0/1:194:133,61:133:4772:61:2169:-127.797,0,-371.236	0/1:271:149,122:149:5334:122:4384:-287.64,0,-398.61	0/1:88:69,19:69:2480:19:669:-29.6726,0,-195.308	0/1:125:68,57:68:2444:57:2048:-132.626,0,-182.584	0/1:126:107,19:107:3844:19:684:-20.2568,0,-306.013	0/1:52:36,16:36:1281:16:576:-33.7856,0,-99.3797	0/1:130:98,32:98:3528:32:1140:-57.8509,0,-274.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chr12	22719172	.	G	C	173122	PASS	AB=0.524465;ABP=101.186;AC=94;AF=0.5;AN=188;AO=9904;CIGAR=1X;DP=18884;DPB=18884;DPRA=0;EPP=21189.1;EPPR=19189.2;GTI=0;LEN=1;MEANALT=1.05319;MQM=59.9542;MQMR=39.5434;NS=94;NUMALT=1;ODDS=113.326;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=353507;QR=320422;RO=8975;RPL=9867;RPP=21189.1;RPPR=19189.2;RPR=37;RUN=1;SAF=0;SAP=21509.3;SAR=9904;SRF=0;SRP=19492;SRR=8975;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:103:47,56:47:1679:56:2003:-149.537,0,-109.165	0/1:339:115,224:115:4100:224:8027:-620.395,0,-246.928	0/1:226:85,141:85:3005:141:5007:-382.746,0,-188.201	0/1:383:172,210:172:6137:210:7503:-560.055,0,-408.19	0/1:154:69,85:69:2439:85:3052:-228.55,0,-166.969	0/1:137:70,67:70:2516:67:2383:-173.486,0,-176.136	0/1:203:121,82:121:4323:82:2930:-202.824,0,-303.654	0/1:324:156,168:156:5562:168:6008:-443.292,0,-375.62	0/1:249:128,121:128:4535:121:4320:-314.02,0,-318.722	0/1:206:104,102:104:3719:102:3663:-267.86,0,-255.21	0/1:93:40,53:40:1436:53:1904:-143.642,0,-92.6096	0/1:122:61,61:61:2188:61:2149:-156.951,0,-150.48	0/1:115:49,66:49:1751:66:2330:-175.339,0,-112.631	0/1:145:60,85:60:2147:85:3044:-230.54,0,-138.214	0/1:118:54,64:54:1928:64:2287:-170.569,0,-127.763	0/1:92:30,62:30:1072:62:2211:-171.56,0,-65.868	0/1:134:65,69:65:2310:69:2454:-180.776,0,-153.036	0/1:149:65,84:65:2319:84:2990:-224.478,0,-151.232	0/1:53:25,28:25:900:28:996:-74.0003,0,-59.9616	0/1:359:130,229:130:4650:229:8189:-628.951,0,-295.015	0/1:345:143,202:143:5110:202:7190:-543.301,0,-340.058	0/1:187:104,83:104:3706:83:2963:-210.61,0,-259.404	0/1:129:41,88:41:1476:88:3108:-241.113,0,-87.1544	0/1:206:131,75:131:4700:75:2681:-179.521,0,-340.754	0/1:151:61,90:61:2188:90:3196:-242.408,0,-142.044	0/1:671:314,356:314:11219:356:12698:-940.568,0,-768.645	0/1:358:162,196:162:5767:196:7024:-523.676,0,-384.151	0/1:80:36,44:36:1296:44:1572:-117.689,0,-86.5038	0/1:501:211,290:211:7519:290:10354:-780.648,0,-503.868	0/1:357:205,152:205:7316:152:5412:-379.744,0,-523.588	0/1:273:122,151:122:4367:151:5373:-401.511,0,-295.644	0/1:18:6,12:6:216:12:428:-33.4403,0,-13.6421	0/1:13:7,6:7:252:6:216:-15.8771,0,-18.1953	0/1:16:7,9:7:252:9:320:-24.3259,0,-15.4307	0/1:12:5,7:5:180:7:252:-19.4166,0,-12.0933	0/1:10:5,5:5:180:5:180:-13.5418,0,-12.5727	0/1:386:163,223:163:5826:223:7975:-601.316,0,-388.498	0/1:454:225,229:225:8025:229:8160:-597.681,0,-556.787	0/1:88:47,41:47:1671:41:1459:-105.045,0,-114.895	0/1:4:2,2:2:63:2:72:-5.6326,0,-4.4018	0/1:258:135,123:135:4823:123:4382:-316.112,0,-333.236	0/1:47:27,20:27:972:20:716:-50.6193,0,-68.8429	0/1:384:186,198:186:6623:198:7068:-520.586,0,-449.801	0/1:119:40,79:40:1436:79:2816:-217.855,0,-87.5243	0/1:148:57,91:57:2031:91:3252:-248.219,0,-131.327	0/1:176:87,89:87:3108:89:3165:-232.093,0,-217.82	0/1:366:193,173:193:6911:173:6168:-445.041,0,-471.889	0/1:454:293,161:293:10475:161:5745:-380.499,0,-755.03	0/1:215:109,106:109:3895:106:3778:-275.498,0,-263.866	0/1:306:112,192:112:3997:192:6828:-522.774,0,-252.866	0/1:233:113,120:113:4048:120:4299:-316.946,0,-279.312	0/1:34:26,8:26:936:8:284:-15.6683,0,-69.0186	0/1:251:158,93:158:5664:93:3323:-223.729,0,-396.228	0/1:111:78,33:78:2775:33:1168:-72.0129,0,-206.448	0/1:43:35,8:35:1239:8:284:-12.9591,0,-92.255	0/1:294:128,165:128:4560:165:5879:-440.745,0,-304.997	0/1:88:27,61:27:968:61:2188:-170.695,0,-56.9293	0/1:30:12,18:12:420:18:648:-49.621,0,-27.7879	0/1:52:21,31:21:736:31:1116:-85.0981,0,-48.4811	0/1:168:105,63:105:3749:63:2264:-153.449,0,-272.172	0/1:210:116,94:116:4164:94:3364:-239.76,0,-296.339	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.0966	0/1:405:203,202:203:7237:202:7231:-528.925,0,-495.379	0/1:508:214,294:214:7609:294:10516:-792.577,0,-499.279	0/1:164:82,82:82:2940:82:2902:-212.045,0,-202.373	0/1:164:70,94:70:2495:94:3375:-254.596,0,-165.966	0/1:392:162,230:162:5816:230:8218:-621.605,0,-386.347	0/1:250:141,109:141:5039:109:3888:-274.856,0,-352.146	0/1:44:7,37:7:248:37:1323:-106.126,0,-7.82393	0/1:169:62,107:62:2211:107:3823:-293.393,0,-135.25	0/1:222:108,114:108:3859:114:4074:-299.888,0,-266.831	0/1:36:16,20:16:572:20:716:-53.9306,0,-37.9725	0/1:271:205,66:205:7310:66:2352:-129.423,0,-532.269	0/1:120:42,78:42:1499:78:2770:-213.416,0,-92.5144	0/1:436:199,237:199:7102:237:8466:-630.695,0,-481.968	0/1:215:87,128:87:3108:128:4541:-344.136,0,-199.902	0/1:330:195,135:195:6951:135:4848:-336.196,0,-483.339	0/1:202:103,99:103:3696:99:3556:-259.333,0,-256.941	0/1:41:18,23:18:639:23:828:-62.5019,0,-42.5311	0/1:281:180,101:180:6432:101:3628:-242.135,0,-465.611	0/1:220:99,121:99:3517:121:4322:-322.929,0,-236.877	0/1:603:297,306:297:10563:306:10911:-800.371,0,-718.414	0/1:199:93,106:93:3328:106:3783:-280.764,0,-225.117	0/1:130:49,81:49:1747:81:2875:-219.851,0,-112.241	0/1:194:61,133:61:2176:133:4748:-369.077,0,-128.329	0/1:267:120,147:120:4291:147:5224:-389.922,0,-281.574	0/1:87:41,46:41:1476:46:1639:-121.608,0,-100.358	0/1:124:56,68:56:2004:68:2421:-180.817,0,-129.158	0/1:125:46,79:46:1635:79:2840:-218.209,0,-104.287	0/1:53:25,28:25:892:28:1004:-74.7213,0,-61.2325	0/1:128:54,74:54:1907:74:2652:-200.3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chr12	22719180	.	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chr12	22731292	.	A	T	9988.06	PASS	AB=0.34191;ABP=1521.72;AC=44;AF=0.234043;AN=188;AO=2402;CIGAR=1X;DP=11468;DPB=11468;DPRA=1.64954;EPP=5218.89;EPPR=19587.6;GTI=6;LEN=1;MEANALT=1.11765;MQM=25.0183;MQMR=32.6088;NS=94;NUMALT=1;ODDS=0.323316;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=86003;QR=324772;RO=9059;RPL=0;RPP=5218.89;RPPR=19596.3;RPR=2402;RUN=1;SAF=2402;SAP=5218.89;SAR=0;SRF=9058;SRP=19665.7;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:66:66,0:66:2372:0:0:0,-19.868,-184.1	0/1:154:112,42:112:4024:42:1500:-47.0134,0,-268.142	0/1:342:205,137:205:7336:137:4912:-201.174,0,-474.288	0/0:156:156,0:156:5574:0:0:0,-46.9607,-427.136	0/1:137:62,75:62:2224:75:2688:-125.398,0,-134.093	0/1:25:15,10:15:540:10:360:-14.9231,0,-34.6966	0/0:50:50,0:50:1796:0:0:0,-15.0515,-136.992	0/1:258:166,92:166:5960:92:3300:-126.717,0,-388.542	0/1:222:163,59:163:5860:59:2116:-64.3283,0,-391.907	0/0:88:88,0:88:3164:0:0:0,-26.4906,-244.344	0/0:62:62,0:62:2228:0:0:0,-18.6639,-169.529	0/1:181:120,61:120:4316:61:2170:-80.7885,0,-278.415	0/0:92:92,0:92:3304:0:0:0,-27.6948,-258.921	0/0:58:58,0:58:2080:0:0:0,-17.4597,-163.421	0/0:81:81,0:81:2904:0:0:0,-24.3834,-220.017	0/1:137:105,32:105:3772:32:1131:-29.7672,0,-251.92	0/0:38:38,0:38:1364:0:0:0,-11.4391,-107.695	0/0:38:38,0:38:1368:0:0:0,-11.4391,-107.887	0/0:39:39,0:39:1392:0:0:0,-11.7402,-109.569	0/1:318:207,111:207:7400:111:3984:-150.84,0,-472.713	0/1:264:163,101:163:5840:101:3620:-144.852,0,-371.736	0/0:97:97,0:97:3484:0:0:0,-29.1999,-267.307	0/0:78:78,0:78:2796:0:0:0,-23.4803,-213.86	0/0:64:61,3:61:2192:3:108:0,-12.3586,-164.693	0/1:142:92,49:92:3292:49:1760:-66.3041,0,-211.919	0/1:299:203,96:203:7281:96:3436:-123.174,0,-457.875	0/0:361:361,0:361:12956:0:0:0,-108.672,-1013.52	0/0:64:64,0:64:2300:0:0:0,-19.2659,-179.476	0/1:422:282,140:282:10105:140:5024:-183.878,0,-639.896	0/1:161:123,38:123:4416:38:1329:-35.4399,0,-293.82	0/1:230:168,62:168:6013:62:2224:-68.5807,0,-394.106	0/0:10:10,0:10:360:0:0:0,-3.0103,-28.2951	0/0:31:31,0:31:1112:0:0:0,-9.33193,-86.3877	0/0:8:8,0:8:288:0:0:0,-2.40824,-22.3961	0/1:16:13,3:13:468:3:108:-2.09086,0,-31.7831	0/1:55:44,10:44:1576:10:360:-5.8507,0,-106.862	0/1:291:200,91:200:7184:91:3272:-114.645,0,-455.476	0/1:80:55,25:55:1976:25:892:-31.5871,0,-130.832	0/0:65:65,0:65:2332:0:0:0,-19.5669,-182.074	0/1:7:6,1:6:216:1:36:-0.359696,0,-15.0728	0/0:83:83,0:83:2976:0:0:0,-24.9855,-232.441	0/0:34:34,0:34:1208:0:0:0,-10.235,-93.4627	0/0:206:206,0:206:7365:0:0:0,-62.0122,-574.98	0/0:103:103,0:103:3695:0:0:0,-31.0061,-281.594	0/1:93:61,32:61:2179:32:1148:-43.2565,0,-140.308	0/1:161:110,51:110:3944:51:1816:-64.8058,0,-253.658	0/0:141:141,0:141:5056:0:0:0,-42.4452,-393.949	0/0:167:167,0:167:5985:0:0:0,-50.272,-455.374	0/0:87:87,0:87:3124:0:0:0,-26.1896,-239.091	0/1:170:107,63:107:3829:63:2252:-88.7804,0,-243.518	0/1:117:73,44:73:2585:44:1576:-62.7971,0,-163.758	0/0:18:18,0:18:648:0:0:0,-5.41854,-50.1948	0/0:191:191,0:191:6868:0:0:0,-57.4967,-540.453	0/0:39:38,0:38:1368:0:0:0,-11.4391,-101.747	0/1:26:18,8:18:648:8:284:-10.0625,0,-43.0885	0/1:231:141,90:141:5049:90:3228:-130.724,0,-316.453	0/0:47:47,0:47:1672:0:0:0,-14.1484,-127.935	0/0:16:14,2:14:504:2:72:0,-0.129359,-34.5121	0/0:9:9,0:9:320:0:0:0,-2.70927,-25.1078	0/0:77:77,0:77:2748:0:0:0,-23.1793,-214.643	0/1:130:79,51:79:2840:51:1823:-75.0755,0,-179.499	0/0:13:13,0:13:468:0:0:0,-3.91339,-36.1063	0/0:140:140,0:140:5020:0:0:0,-42.1442,-384.229	0/1:250:143,106:143:5099:106:3800:-160.222,0,-316.827	0/0:75:74,1:74:2652:1:36:0,-20.1103,-206.252	0/1:146:84,62:84:3003:62:2216:-93.7849,0,-188.325	0/1:306:212,93:212:7599:93:3328:-114.46,0,-487.066	0/0:123:123,0:123:4392:0:0:0,-37.0267,-338.735	0/0:55:55,0:55:1976:0:0:0,-16.5566,-155.336	0/1:79:65,14:65:2340:14:504:-7.54833,0,-158.686	0/1:64:35,29:35:1260:29:1040:-45.3257,0,-76.6169	0/1:26:13,13:13:464:13:468:-21.2827,0,-28.1137	0/0:82:80,1:80:2864:1:36:0,-21.1618,-220.07	0/1:135:77,58:77:2760:58:2076:-88.2565,0,-174.629	0/1:205:137,68:137:4908:68:2432:-89.3454,0,-324.119	0/0:151:150,1:150:5396:1:36:0,-42.9886,-410.498	0/0:123:122,1:122:4384:1:36:0,-34.5598,-340.667	0/1:132:93,39:93:3336:39:1392:-46.9754,0,-219.65	0/1:19:13,6:13:468:6:212:-7.80653,0,-30.0683	0/0:129:129,0:129:4623:0:0:0,-38.8329,-358.544	0/1:196:132,64:132:4709:64:2292:-83.2978,0,-311.207	0/0:255:255,0:255:9148:0:0:0,-76.7626,-697.516	0/0:82:81,1:81:2904:1:36:0,-22.2176,-217.976	0/1:136:87,48:87:3124:48:1724:-66.2095,0,-199.364	0/0:52:52,0:52:1864:0:0:0,-15.6536,-143.546	0/0:123:123,0:123:4420:0:0:0,-37.0267,-335.879	0/1:37:27,10:27:972:10:360:-11.3107,0,-64.1949	0/0:72:72,0:72:2588:0:0:0,-21.6742,-202.277	0/1:138:85,53:85:3039:53:1904:-76.3347,0,-195.919	0/1:78:46,32:46:1648:32:1152:-47.8132,0,-104.831	0/1:152:108,44:108:3876:44:1580:-52.1384,0,-256.514	0/1:228:149,79:149:5344:79:2814:-106.563,0,-339.195	0/0:129:129,0:129:4624:0:0:0,-38.8329,-351.704	0/0:104:104,0:104:3724:0:0:0,-31.3071,-286.411
chr12	22731306	.	A	G	100800	PASS	AB=0.324757;ABP=1869.16;AC=143;AF=0.760638;AN=188;AO=6593;CIGAR=1X;DP=11360;DPB=11360;DPRA=0;EPP=13803.1;EPPR=35.5249;GTI=13;LEN=1;MEANALT=1.06383;MQM=32.61;MQMR=28.6891;NS=94;NUMALT=1;ODDS=2.11855;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235463;QR=170568;RO=4761;RPL=59;RPP=13811.6;RPPR=34.558;RPR=6534;RUN=1;SAF=6592;SAP=14310.8;SAR=1;SRF=4759;SRP=10324;SRR=2;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:66:1,65:1:36:65:2332:-179.689,-17.5891,0	0/1:156:100,56:100:3588:56:1996:-109.797,0,-207.395	0/1:339:233,106:233:8360:106:3794:-196.002,0,-473.683	1/1:155:1,154:1:36:154:5511:-422.093,-44.5731,0	0/1:139:104,35:104:3721:35:1256:-56.4694,0,-205.686	0/1:24:15,9:15:540:9:320:-17.9671,0,-29.3024	1/1:48:0,48:0:0:48:1701:-131.099,-14.4494,0	0/1:258:172,86:172:6161:86:3064:-162.407,0,-347.956	0/1:220:130,90:130:4663:90:3228:-187.754,0,-261.584	1/1:86:1,85:1:36:85:3033:-231.349,-22.3055,0	1/1:62:0,62:0:0:62:2211:-168.682,-18.6639,0	0/1:182:120,62:120:4316:62:2207:-115.948,0,-245.133	1/1:89:0,89:0:0:89:3191:-250.295,-26.7917,0	1/1:55:1,54:1:32:54:1907:-147.374,-13.6104,0	1/1:77:0,77:0:0:77:2760:-209.294,-23.1793,0	0/1:136:90,46:90:3217:46:1632:-88.0093,0,-190.568	1/1:39:1,38:1:36:38:1360:-103.671,-8.14361,0	1/1:39:0,39:0:0:39:1404:-110.699,-11.7402,0	1/1:36:0,36:0:0:36:1292:-100.966,-10.8371,0	0/1:317:204,113:204:7282:113:4008:-213.477,0,-405.28	0/1:261:199,62:199:7144:62:2216:-94.6367,0,-413.683	1/1:98:2,96:2:72:96:3421:-258.781,-24.6412,0	1/1:79:0,79:0:0:79:2810:-215.927,-23.7814,0	1/1:64:6,58:6:216:58:2072:-146.963,-3.89193,0	0/1:141:95,46:95:3416:46:1624:-83.9842,0,-193.725	0/1:300:194,106:194:6968:106:3789:-195.211,0,-385.003	1/1:358:2,356:2:72:356:12755:-992.768,-101.386,0	1/1:59:0,59:0:0:59:2087:-163.619,-17.7608,0	0/1:415:272,141:272:9751:141:5037:-262.32,0,-543.096	0/1:160:98,62:98:3501:62:2228:-124.752,0,-202.377	0/1:233:139,94:139:4943:94:3345:-187.561,0,-277.17	1/1:10:0,10:0:0:10:360:-28.2951,-3.0103,0	1/1:31:0,31:0:0:31:1112:-86.3877,-9.33193,0	1/1:8:0,8:0:0:8:284:-22.2342,-2.40824,0	0/1:15:6,9:6:216:9:320:-20.8065,0,-10.8585	0/1:56:28,28:28:1004:28:996:-61.7601,0,-56.1897	0/1:288:191,97:191:6852:97:3460:-176.013,0,-386.649	0/1:82:50,32:50:1796:32:1137:-65.1239,0,-100.289	1/1:64:0,64:0:0:64:2250:-176.989,-19.2659,0	0/1:6:2,4:2:72:4:144:-9.75128,0,-3.50484	1/1:80:0,80:0:0:80:2848:-223.177,-24.0824,0	1/1:32:1,31:1:36:31:1116:-85.9377,-7.83968,0	1/1:199:1,198:1:36:198:7060:-547.937,-56.3185,0	1/1:98:1,97:1:36:97:3460:-261.594,-25.9222,0	0/1:89:60,29:60:2156:29:1044:-53.7882,0,-121.842	0/1:160:109,51:109:3916:51:1817:-91.9382,0,-222.355	1/1:139:1,138:1:36:138:4926:-381.368,-38.7195,0	1/1:163:1,161:1:36:161:5764:-437.486,-46.576,0	1/1:88:1,87:1:36:87:3104:-235.238,-23.4361,0	0/1:170:125,45:125:4451:45:1620:-71.8654,0,-259.376	0/1:117:90,27:90:3236:27:968:-39.0907,0,-189.127	1/1:18:0,18:0:0:18:648:-50.1948,-5.41854,0	1/1:187:1,186:1:36:186:6676:-521.899,-53.169,0	1/1:39:0,39:0:0:39:1395:-105.089,-11.7402,0	0/1:23:11,12:11:396:12:432:-27.124,0,-19.4516	0/1:232:175,57:175:6234:57:2023:-87.9412,0,-358.096	1/1:48:0,48:0:0:48:1709:-130.158,-14.4494,0	0/1:16:3,13:3:108:13:468:-31.6339,0,-2.63931	1/1:8:0,8:0:0:8:280:-22.3512,-2.40824,0	1/1:75:1,73:1:36:73:2603:-199.953,-19.4124,0	0/1:128:90,38:90:3232:38:1364:-66.1366,0,-184.326	1/1:13:0,13:0:0:13:468:-36.1063,-3.91339,0	1/1:134:0,134:0:0:134:4816:-367.582,-40.338,0	0/1:247:179,68:179:6401:68:2429:-113.154,0,-357.596	1/1:74:5,69:5:176:69:2460:-180.619,-8.75692,0	0/1:145:94,51:94:3364:51:1832:-97.7104,0,-181.308	0/1:311:213,97:213:7633:97:3476:-173.915,0,-436.848	1/1:119:1,118:1:36:118:4193:-320.975,-33.174,0	1/1:53:0,53:0:0:53:1891:-148.52,-15.9546,0	0/1:79:58,21:58:2050:21:752:-35.5659,0,-127.871	0/1:64:39,25:39:1400:25:896:-49.1219,0,-72.6104	0/1:25:19,6:19:684:6:216:-9.41,0,-38.48	1/1:80:1,78:1:36:78:2791:-215.985,-21.5539,0	0/1:136:105,31:105:3760:31:1112:-46.3615,0,-217.98	0/1:206:149,57:149:5340:57:2044:-99.0939,0,-315.05	1/1:144:3,141:3:108:141:5039:-378.202,-35.2199,0	1/1:120:1,119:1:36:119:4263:-331.963,-33.6567,0	0/1:129:83,46:83:2976:46:1640:-88.8831,0,-171.866	0/1:19:8,11:8:288:11:388:-24.1606,0,-13.4874	1/1:127:1,126:1:36:126:4467:-346.236,-34.9847,0	0/1:201:142,59:142:5084:59:2120:-105.529,0,-298.3	1/1:248:1,247:1:36:247:8790:-671.783,-72.3766,0	1/1:80:1,79:1:36:79:2805:-210.98,-21.6155,0	0/1:139:95,44:95:3408:44:1575:-78.9404,0,-193.729	1/1:50:0,50:0:0:50:1796:-138.511,-15.0515,0	1/1:117:1,116:1:36:116:4146:-313.563,-32.7536,0	0/1:35:19,16:19:684:16:576:-34.2742,0,-36.8421	1/1:71:0,71:0:0:71:2512:-197.343,-21.3731,0	0/1:137:92,45:92:3300:45:1604:-84.7538,0,-185.281	0/1:79:56,23:56:2004:23:828:-40.1601,0,-114.926	0/1:153:99,54:99:3564:54:1936:-105.411,0,-204.887	0/1:228:166,62:166:5960:62:2232:-101.902,0,-343.298	1/1:131:2,129:2:68:129:4614:-347.343,-34.6995,0	1/1:106:0,106:0:0:106:3777:-290.543,-31.9092,0
chr12	22731307	.	TAAGGATGCA	TAAGGA,TATGGA	162133	PASS	AB=0.658037,0.337748;ABP=1444.34,1522.24;AC=145,43;AF=0.771277,0.228723;AN=188;AO=8461,2260;CIGAR=5M4D1M,1M4D3M1X1M;DP=10769;DPB=6500.5;DPRA=0,1.9236;EPP=18323.8,4867.2;EPPR=5.18177;GTI=4;LEN=4,6;MEANALT=2.02128,2.57407;MQM=30.5164,32.5783;MQMR=60;NS=94;NUMALT=2;ODDS=0.456018;PAIRED=0,0;PAIREDR=0;PAO=6,3;PQA=185.333,89.3333;PQR=1693.33;PRO=53;QA=297710,72566;QR=36;RO=1;RPL=8453,2255;RPP=18306.4,4867.2;RPPR=5.18177;RPR=8,5;RUN=1,1;SAF=8459,2260;SAP=18358.5,4910.54;SAR=2,0;SRF=1;SRP=5.18177;SRR=0;TYPE=del,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:65:0,64,1:0:0:64,1:2241,23:-176.196,-19.2659,0,-174.699,-17.5669,-174.398	1/2:146:0,91,55:0:0:91,55:3221,1793:-331.947,-130.629,-103.235,-201.279,0,-184.723	1/2:325:0,228,96:0:0:228,96:8044,3131:-721.311,-228.95,-160.315,-492.318,0,-463.419	1/1:142:0,140,1:0:0:140,1:4934,21:-381.521,-42.1442,0,-380.202,-40.8996,-379.901	1/2:135:0,108,27:0:0:108,27:3806,892:-291.035,-66.1104,-33.5992,-225.221,0,-217.093	1/2:25:0,18,5:0:0:18,5:629,162:-49.9975,-11.8446,-6.42611,-38.1594,0,-36.6542	1/1:44:0,44,0:0:0:44,0:1528,0:-119.089,-13.2453,0,-119.089,-13.2453,-119.089	1/2:241:0,166,73:0:0:166,73:5864,2389:-535.849,-174.104,-124.133,-361.666,0,-339.69	1/2:208:0,141,67:0:0:141,67:4921,2178:-474.715,-158.978,-116.532,-315.759,0,-295.59	1/1:79:0,78,0:0:0:78,0:2725,0:-211.657,-23.4803,0,-211.657,-23.4803,-211.657	1/1:60:0,59,0:0:0:59,0:2069,0:-158.328,-17.7608,0,-158.328,-17.7608,-158.328	1/2:170:0,112,57:0:0:112,57:3977,1854:-380.472,-135.071,-101.356,-245.508,0,-228.35	1/1:88:0,88,0:0:0:88,0:3099,0:-244.51,-26.4906,0,-244.51,-26.4906,-244.51	1/1:51:0,51,0:0:0:51,0:1796,0:-141.599,-15.3525,0,-141.599,-15.3525,-141.599	1/1:78:0,78,0:0:0:78,0:2770,0:-210.37,-23.4803,0,-210.37,-23.4803,-210.37	1/2:129:0,73,56:0:0:73,56:2555,1822:-296.013,-132.59,-110.615,-163.712,0,-146.855	1/1:33:0,33,0:0:0:33,0:1141,0:-90.3638,-9.93399,0,-90.3638,-9.93399,-90.3638	1/1:35:0,34,0:0:0:34,0:1196,0:-95.3518,-10.235,0,-95.3518,-10.235,-95.3518	1/1:37:0,37,0:0:0:37,0:1278,0:-101.117,-11.1381,0,-101.117,-11.1381,-101.117	1/2:304:0,208,95:0:0:208,95:7297,3035:-666.558,-219.469,-156.855,-447.091,0,-418.493	1/2:251:0,156,94:0:0:156,94:5456,3041:-551.096,-221.375,-174.414,-329.738,0,-301.441	1/1:93:0,93,0:0:0:93,0:3273,0:-252.635,-27.9958,0,-252.635,-27.9958,-252.635	1/1:76:0,76,0:0:0:76,0:2686,0:-207.2,-22.8783,0,-207.2,-22.8783,-207.2	1/1:62:0,58,3:0:0:58,3:2050,99:-159.196,-17.4597,0,-152.002,-10.3045,-151.099	1/2:136:0,92,44:0:0:92,44:3229,1436:-301.053,-104.651,-76.9564,-196.691,0,-183.445	1/2:284:0,191,92:0:0:191,92:6683,2901:-615.774,-210.304,-152.808,-405.529,0,-377.835	1/1:338:0,335,1:0:0:335,1:11716,32:-923.748,-100.845,0,-921.398,-98.4965,-921.097	1/1:59:0,59,0:0:0:59,0:2043,0:-161.717,-17.7608,0,-161.717,-17.7608,-161.717	1/2:393:0,261,130:0:0:261,130:9205,4081:-856.764,-293.698,-215.129,-563.052,0,-523.918	1/2:152:0,91,60:0:0:91,60:3214,1963:-347.667,-142.739,-115.346,-204.94,0,-186.878	1/2:227:0,152,75:0:0:152,75:5356,2366:-506.622,-172.054,-126.298,-334.525,0,-311.947	1/1:10:0,10,0:0:0:10,0:360,0:-28.2951,-3.0103,0,-28.2951,-3.0103,-28.2951	1/1:27:0,27,0:0:0:27,0:949,0:-74.0328,-8.12781,0,-74.0328,-8.12781,-74.0328	1/1:6:0,6,0:0:0:6,0:212,0:-17.0174,-1.80618,0,-17.0174,-1.80618,-17.0174	1/2:15:0,12,3:0:0:12,3:415,99:-34.9175,-7.49433,-3.88197,-27.7206,0,-26.8175	1/2:53:0,35,18:0:0:35,18:1225,578:-123.21,-42.7221,-32.1861,-80.7815,0,-75.3629	1/2:277:0,178,97:0:0:178,97:6244,3062:-602.056,-221.245,-167.662,-380.856,0,-351.656	1/2:77:0,53,24:0:0:53,24:1865,785:-175.648,-57.4235,-41.4689,-118.517,0,-111.292	1/1:58:0,58,0:0:0:58,0:2033,0:-160.234,-17.4597,0,-160.234,-17.4597,-160.234	1/2:7:0,6,1:0:0:6,1:207,33:-16.6936,-2.69805,-0.891869,-14.2944,0,-13.9934	1/1:74:0,74,0:0:0:74,0:2568,0:-203.232,-22.2762,0,-203.232,-22.2762,-203.232	1/1:26:0,26,0:0:0:26,0:909,0:-71.9585,-7.82678,0,-71.9585,-7.82678,-71.9585	1/1:185:0,185,0:0:0:185,0:6505,0:-511.002,-55.6906,0,-511.002,-55.6906,-511.002	1/1:91:0,90,0:0:0:90,0:3217,0:-245.637,-27.0927,0,-245.637,-27.0927,-245.637	1/2:83:0,54,29:0:0:54,29:1894,907:-180.915,-65.7006,-49.445,-115.117,0,-106.387	1/2:155:0,100,55:0:0:100,55:3479,1762:-342.053,-127.142,-97.0389,-215.194,0,-198.638	1/1:130:0,129,1:0:0:129,1:4578,33:-359.532,-38.8329,0,-357.134,-36.1348,-356.833	1/1:141:0,141,0:0:0:141,0:4936,0:-379.898,-42.4452,0,-379.898,-42.4452,-379.898	1/1:81:0,80,1:0:0:80,1:2833,32:-217.702,-24.0824,0,-215.394,-21.4843,-215.093	1/2:161:0,99,62:0:0:99,62:3491,1988:-354.122,-145.276,-115.474,-209.13,0,-190.466	1/2:110:0,64,46:0:0:64,46:2272,1461:-240.232,-105.715,-86.4491,-134.546,0,-120.699	1/1:18:0,18,0:0:0:18,0:648,0:-50.1948,-5.41854,0,-50.1948,-5.41854,-50.1948	1/1:175:0,175,0:0:0:175,0:6200,0:-489.338,-52.6803,0,-489.338,-52.6803,-489.338	1/1:38:0,36,0:0:0:36,0:1288,0:-99.0559,-10.8371,0,-99.0559,-10.8371,-99.0559	1/2:25:0,22,3:0:0:22,3:769,99:-57.3049,-7.49433,-0.871671,-50.1087,0,-49.2056	1/2:223:0,143,80:0:0:143,80:5016,2554:-483.781,-18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chr12	22940258	.	C	T	131179	PASS	AB=0.51992;ABP=18.5826;AC=143;AF=0.760638;AN=188;AO=6383;CIGAR=1X;DP=8565;DPB=8565;DPRA=0;EPP=13854.8;EPPR=4730.31;GTI=0;LEN=1;MEANALT=1.01064;MQM=59.9931;MQMR=60;NS=94;NUMALT=1;ODDS=3.60789;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=225784;QR=77323;RO=2181;RPL=0;RPP=13863.5;RPPR=4721.64;RPR=6383;RUN=1;SAF=1;SAP=13854.8;SAR=6382;SRF=3;SRP=4712.97;SRR=2178;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:42:0,42:0:0:42:1469:-132.502,-12.6433,0	0/1:83:48,35:48:1685:35:1237:-86.6468,0,-126.946	0/1:150:71,79:71:2532:79:2794:-206.547,0,-182.977	1/1:102:0,102:0:0:102:3624:-326.368,-30.7051,0	0/1:67:30,37:30:1076:37:1316:-98.5728,0,-76.9838	0/1:45:21,24:21:748:24:839:-62.2809,0,-54.0989	1/1:124:0,124:0:0:124:4390:-395.275,-37.3277,0	0/1:115:72,43:72:2527:43:1511:-101.664,0,-193.062	0/1:140:62,78:62:2181:78:2783:-208.549,0,-154.411	1/1:91:0,91:0:0:91:3211:-289.216,-27.3937,0	1/1:68:0,68:0:0:68:2390:-215.355,-20.47,0	0/1:121:58,63:58:2070:63:2211:-162.828,0,-150.145	1/1:90:0,90:0:0:90:3176:-286.065,-27.0927,0	1/1:78:0,78:0:0:78:2750:-247.743,-23.4803,0	1/1:98:0,98:0:0:98:3490:-314.311,-29.5009,0	0/1:60:30,30:30:1068:30:1063:-77.919,0,-78.3703	1/1:30:0,30:0:0:30:1054:-95.1692,-9.0309,0	1/1:34:0,34:0:0:34:1205:-108.754,-10.235,0	1/1:44:0,44:0:0:44:1561:-140.78,-13.2453,0	0/1:166:69,97:69:2450:97:3438:-259.664,0,-170.783	0/1:182:85,97:85:3019:97:3408:-252.148,0,-217.154	1/1:110:0,110:0:0:110:3906:-351.734,-33.1133,0	1/1:102:1,101:1:36:101:3596:-320.248,-27.1068,0	1/1:89:3,86:3:108:86:3058:-265.374,-16.7165,0	0/1:97:42,55:42:1500:55:1926:-144.416,0,-106.095	0/1:256:128,128:128:4554:128:4519:-329.819,0,-332.964	1/1:240:1,239:1:36:239:8500:-761.407,-68.6489,0	1/1:47:0,47:0:0:47:1672:-150.767,-14.1484,0	0/1:200:94,106:94:3332:106:3749:-277.406,0,-239.889	0/1:82:38,44:38:1360:44:1576:-117.446,0,-98.0161	0/1:117:56,61:56:1995:61:2158:-159.266,0,-144.603	1/1:6:0,6:0:0:6:216:-19.7905,-1.80618,0	1/1:25:0,25:0:0:25:866:-78.2539,-7.52575,0	1/1:15:0,15:0:0:15:532:-48.2131,-4.51545,0	0/1:21:10,11:10:356:11:378:-28.0275,0,-26.0596	0/1:28:15,13:15:532:13:464:-33.6687,0,-39.7842	0/1:243:109,134:109:3873:134:4750:-354.511,0,-275.615	1/1:158:0,158:0:0:158:5553:-499.902,-47.5627,0	1/1:83:0,83:0:0:83:2950:-265.734,-24.9855,0	0/1:6:1,5:1:36:5:176:-14.3788,0,-1.79209	1/1:76:0,76:0:0:76:2660:-239.647,-22.8783,0	1/1:37:0,37:0:0:37:1311:-118.291,-11.1381,0	1/1:168:0,168:0:0:168:5960:-536.512,-50.573,0	1/1:76:0,76:0:0:76:2693:-242.614,-22.8783,0	0/1:74:35,39:35:1225:39:1362:-100.601,0,-88.2752	0/1:153:75,78:75:2659:78:2744:-201.145,0,-193.499	1/1:91:0,91:0:0:91:3175:-285.977,-27.3937,0	1/1:103:0,103:0:0:103:3671:-330.594,-31.0061,0	1/1:75:0,75:0:0:75:2626:-236.586,-22.5773,0	0/1:83:38,45:38:1360:45:1587:-118.134,0,-97.7151	0/1:165:53,112:53:1900:112:3980:-308.722,0,-121.608	1/1:10:0,10:0:0:10:347:-31.5636,-3.0103,0	0/1:86:45,41:45:1594:41:1464:-106.167,0,-117.86	1/1:67:0,67:0:0:67:2360:-212.658,-20.169,0	0/1:21:9,12:9:316:12:424:-32.1748,0,-22.4572	0/1:97:48,49:48:1696:49:1735:-127.23,0,-123.723	1/1:81:1,80:1:32:80:2830:-251.74,-21.1841,0	0/1:12:4,8:4:135:8:284:-22.291,0,-8.87015	1/1:12:0,12:0:0:12:419:-38.0427,-3.61236,0	1/1:103:0,103:0:0:103:3649:-328.616,-31.0061,0	0/1:133:57,76:57:2008:76:2698:-203.027,0,-140.954	1/1:6:0,6:0:0:6:208:-19.0591,-1.80618,0	1/1:98:0,98:0:0:98:3455:-311.165,-29.5009,0	0/1:187:82,105:82:2918:105:3718:-278.532,0,-206.562	1/1:76:2,74:2:72:74:2639:-230.92,-16.0416,0	0/1:42:25,17:25:892:17:586:-40.4195,0,-67.9564	0/1:137:65,72:65:2306:72:2563:-189.679,0,-166.559	1/1:170:0,170:0:0:170:5978:-538.136,-51.1751,0	1/1:55:0,55:0:0:55:1960:-176.675,-16.5567,0	0/1:87:56,31:56:1980:31:1112:-74.2017,0,-152.285	0/1:44:22,22:22:780:22:756:-55.1105,0,-57.2777	0/1:35:19,16:19:665:16:560:-40.1927,0,-49.6367	1/1:121:1,120:1:36:120:4238:-378.005,-32.8264,0	0/1:76:43,33:43:1509:33:1163:-82.0978,0,-113.223	0/1:212:82,130:82:2920:130:4596:-349.988,0,-199.218	1/1:90:0,90:0:0:90:3220:-290.023,-27.0927,0	1/1:97:0,97:0:0:97:3467:-312.242,-29.1999,0	0/1:63:23,40:23:816:40:1428:-109.853,0,-54.7968	0/1:12:9,3:9:324:3:108:-6.46281,0,-25.8935	1/1:51:0,51:0:0:51:1815:-163.631,-15.3525,0	0/1:70:39,31:39:1360:31:1081:-76.5243,0,-101.623	1/1:155:1,154:1:36:154:5416:-483.975,-43.0614,0	1/1:67:1,66:1:36:66:2338:-207.08,-16.5707,0	0/1:88:50,38:50:1760:38:1352:-95.4897,0,-132.19	1/1:46:0,46:0:0:46:1615:-145.638,-13.8474,0	1/1:134:0,134:0:0:134:4746:-427.298,-40.338,0	0/1:31:15,16:15:523:16:568:-42.1199,0,-38.0665	1/1:99:0,99:0:0:99:3535:-318.359,-29.802,0	0/1:101:51,50:51:1810:50:1739:-126.388,0,-132.776	0/1:70:34,35:34:1212:35:1248:-91.4941,0,-88.2555	0/1:166:90,76:90:3175:76:2689:-192.283,0,-236.003	0/1:94:60,34:60:2122:34:1194:-79.4669,0,-162.951	1/1:73:0,73:0:0:73:2599:-234.159,-21.9752,0	1/1:134:2,132:2:72:132:4650:-411.83,-33.5013,0
chr12	22975660	.	AGCG	TGCG,TGCA	363762	PASS	AB=0.562278,0.432162;ABP=154.472,182.727;AC=150,38;AF=0.797872,0.202128;AN=188;AO=14476,2018;CIGAR=1X3M,1X2M1X;DP=16578;DPB=16578.2;DPRA=0,1.26281;EPP=31419.9,4385.04;EPPR=19.0002;GTI=2;LEN=1,4;MEANALT=2.23404,2.61538;MQM=59.9912,59.5456;MQMR=57.6364;NS=94;NUMALT=2;ODDS=5.64994;PAIRED=0,0;PAIREDR=0;PAO=0,1;PQA=0,36;PQR=0;PRO=0;QA=517782,71273;QR=316;RO=11;RPL=2,0;RPP=31419.9,4385.04;RPPR=19.0002;RPR=14474,2018;RUN=1,1;SAF=14476,2018;SAP=31437.2,4385.04;SAR=0,0;SRF=11;SRP=26.8965;SRR=0;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:72:0,72,0:0:0:72,0:2571,0:-231.628,-21.6742,0,-231.628,-21.6742,-231.628	1/2:61:0,31,29:0:0:31,29:1112,1038:-175.118,-84.4168,-75.0848,-90.6996,0,-81.9698	1/2:119:0,78,40:0:0:78,40:2804,1414:-343.901,-115.138,-91.6575,-228.759,0,-216.718	1/1:202:0,201,0:0:0:201,0:7205,0:-648.142,-60.507,0,-648.142,-60.507,-648.142	1/2:58:0,39,19:0:0:39,19:1400,671:-169.201,-54.9969,-43.2568,-114.559,0,-108.839	1/2:55:0,29,26:0:0:29,26:1044,913:-159.841,-74.651,-65.9211,-85.5449,0,-77.7182	1/1:94:0,94,0:0:0:94,0:3357,0:-302.346,-28.2968,0,-302.346,-28.2968,-302.346	1/2:115:0,51,63:0:0:51,63:1824,2223:-329.765,-181.031,-165.679,-148.837,0,-129.872	1/2:96:0,43,51:0:0:43,51:1548,1801:-272.919,-146.607,-133.663,-126.314,0,-110.961	1/1:81:0,80,0:0:0:80,0:2849,0:-256.287,-24.0824,0,-256.287,-24.0824,-256.287	1/1:469:0,468,0:0:0:468,0:16732,0:-1505.25,-140.882,0,-1505.25,-140.882,-1505.25	1/2:114:0,48,66:0:0:48,66:1720,2312:-328.743,-188.462,-174.013,-140.635,0,-120.767	1/1:111:0,109,0:0:0:109,0:3912,0:-351.942,-32.8123,0,-351.942,-32.8123,-351.942	1/1:80:0,79,0:0:0:79,0:2820,0:-253.679,-23.7814,0,-253.679,-23.7814,-253.679	1/1:59:0,59,0:0:0:59,0:2111,0:-190.258,-17.7608,0,-190.258,-17.7608,-190.258	1/2:99:0,47,51:0:0:47,51:1692,1803:-284.889,-146.827,-132.679,-138.068,0,-122.716	1/1:35:0,35,0:0:0:35,0:1260,0:-113.705,-10.5361,0,-113.705,-10.5361,-113.705	1/1:32:0,32,0:0:0:32,0:1143,0:-103.179,-9.63296,0,-103.179,-9.63296,-103.179	1/1:155:1,154,0:1:25:154,0:5527,0:-494.826,-44.1598,0,-495.127,-46.3586,-497.075	1/2:112:0,60,52:0:0:60,52:2148,1835:-324.894,-149.724,-131.662,-175.526,0,-159.872	1/2:156:0,80,76:0:0:80,76:2876,2680:-453.183,-218.545,-194.463,-234.994,0,-212.115	1/1:102:1,100,0:1:36:100,0:3592,0:-319.887,-27.1656,0,-320.188,-30.103,-323.126	1/1:114:0,114,0:0:0:114,0:4043,0:-364.058,-34.3174,0,-364.058,-34.3174,-364.058	1/1:68:0,68,0:0:0:68,0:2404,0:-216.615,-20.47,0,-216.615,-20.47,-216.615	1/2:77:0,42,35:0:0:42,35:1492,1235:-222.305,-100.727,-88.0835,-121.931,0,-111.395	1/2:205:0,105,99:0:0:105,99:3772,3498:-592.48,-284.765,-253.157,-307.77,0,-277.968	1/1:277:0,275,0:0:0:275,0:9827,0:-884.098,-82.7833,0,-884.098,-82.7833,-884.098	1/1:28:0,28,0:0:0:28,0:988,0:-89.2333,-8.42884,0,-89.2333,-8.42884,-89.2333	1/2:254:1,129,122:1:23:129,122:4605,4332:-726.357,-351.231,-314.166,-373.718,0,-338.76	1/2:161:0,85,75:0:0:85,75:3046,2680:-467.03,-218.605,-193.017,-248.54,0,-225.963	1/2:125:0,81,44:0:0:81,44:2893,1532:-360.782,-124.912,-100.528,-236.221,0,-222.976	1/1:252:1,250,0:1:32:250,0:8922,0:-799.743,-72.6991,0,-800.044,-75.2575,-802.622	1/1:798:0,793,0:0:0:793,0:28398,0:-2554.6,-238.717,0,-2554.6,-238.717,-2554.6	1/1:458:1,453,3:1:36:453,3:16182,107:-1452.45,-133.429,0,-1444.03,-127.646,-1446.07	1/1:882:1,874,4:1:29:874,4:31166,144:-2801.06,-260.797,0,-2789.61,-251.322,-2790.71	1/1:713:1,707,4:1:26:707,4:25308,144:-2274.33,-210.806,0,-2262.88,-201.045,-2263.71	1/2:191:0,87,104:0:0:87,104:3120,3678:-554.322,-299.842,-273.652,-254.837,0,-223.529	1/1:127:0,127,0:0:0:127,0:4556,0:-410.205,-38.2308,0,-410.205,-38.2308,-410.205	1/1:328:0,326,1:0:0:326,1:11675,27:-1050.36,-98.1358,0,-1048.24,-95.977,-1047.93	1/1:195:0,195,0:0:0:195,0:6956,0:-626.106,-58.7009,0,-626.106,-58.7009,-626.106	1/1:92:0,92,0:0:0:92,0:3278,0:-295.237,-27.6948,0,-295.237,-27.6948,-295.237	1/1:191:0,190,1:0:0:190,1:6809,36:-612.496,-57.1957,0,-609.559,-53.8985,-609.258	1/1:220:0,219,0:0:0:219,0:7851,0:-706.255,-65.9256,0,-706.255,-65.9256,-706.255	1/1:53:0,52,1:0:0:52,1:1863,36:-167.589,-15.6536,0,-164.651,-12.3563,-164.35	1/2:64:0,29,34:0:0:29,34:1044,1203:-183.155,-97.9674,-89.2375,-85.1851,0,-74.9501	1/2:138:0,69,68:0:0:69,68:2460,2409:-396.874,-196.345,-175.574,-200.632,0,-180.162	1/1:59:0,59,0:0:0:59,0:2107,0:-189.899,-17.7608,0,-189.899,-17.7608,-189.899	1/1:136:0,135,0:0:0:135,0:4784,0:-430.436,-40.6391,0,-430.436,-40.6391,-430.436	1/1:93:0,93,0:0:0:93,0:3340,0:-300.816,-27.9958,0,-300.816,-27.9958,-300.816	1/2:93:0,52,41:0:0:52,41:1872,1440:-270.299,-117.548,-101.894,-153.106,0,-140.763	1/2:127:0,68,58:0:0:68,58:2444,2041:-365.503,-166.114,-145.643,-199.387,0,-181.927	1/1:642:0,640,1:0:0:640,1:22878,36:-2058.05,-192.659,0,-2055.11,-189.722,-2054.81	1/2:100:0,54,46:0:0:54,46:1940,1637:-292.025,-133.765,-117.509,-158.617,0,-144.77	1/1:78:0,77,0:0:0:77,0:2756,0:-247.922,-23.1793,0,-247.922,-23.1793,-247.922	1/1:278:1,271,6:1:30:271,6:9674,213:-867.57,-79.188,0,-850.681,-64.3449,-851.273	1/2:107:0,49,56:0: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chr12	22975684	.	C	T	29369.4	PASS	AB=0.432587;ABP=175.746;AC=38;AF=0.202128;AN=188;AO=1957;CIGAR=1X;DP=16175;DPB=16175;DPRA=1.10039;EPP=4097.67;EPPR=30861.8;GTI=2;LEN=1;MEANALT=1.05882;MQM=59.5268;MQMR=59.9849;NS=94;NUMALT=1;ODDS=13.0401;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69805;QR=505636;RO=14215;RPL=1938;RPP=4089.15;RPPR=30861.8;RPR=19;RUN=1;SAF=1956;SAP=4243.9;SAR=1;SRF=14215;SRP=30870.5;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:73:73,0:73:2604:0:0:0,-21.9752,-234.58	0/1:63:32,31:32:1132:31:1112:-81.1424,0,-83.2237	0/1:113:76,37:76:2736:37:1328:-85.8012,0,-212.465	0/0:199:199,0:199:7104:0:0:0,-59.905,-639.382	0/1:58:39,19:39:1384:19:672:-43.3462,0,-107.399	0/1:54:29,25:29:1028:25:880:-62.9813,0,-76.5774	0/0:90:90,0:90:3197:0:0:0,-27.0927,-287.953	0/1:112:48,64:48:1724:64:2258:-169.674,0,-121.73	0/1:92:42,50:42:1496:50:1788:-133.422,0,-107.24	0/0:81:81,0:81:2895:0:0:0,-24.3834,-260.786	0/0:460:459,1:459:16318:1:36:0,-134.876,-1464.69	0/1:109:46,63:46:1628:63:2231:-168.234,0,-113.996	0/0:109:109,0:109:3891:0:0:0,-32.8123,-350.385	0/0:76:76,0:76:2698:0:0:0,-22.8783,-243.064	0/0:57:57,0:57:2040:0:0:0,-17.1587,-183.872	0/1:97:46,51:46:1635:51:1819:-134.769,0,-118.238	0/0:35:35,0:35:1214:0:0:0,-10.536,-109.559	0/0:31:31,0:31:1086:0:0:0,-9.33193,-98.0476	0/0:148:148,0:148:5277:0:0:0,-44.5524,-475.067	0/1:109:59,50:59:2108:50:1780:-127.647,0,-157.177	0/1:148:75,73:75:2688:73:2584:-188.222,0,-197.455	0/0:101:100,1:100:3537:1:36:0,-26.8058,-314.94	0/0:116:116,0:116:4131:0:0:0,-34.9195,-371.976	0/0:64:64,0:64:2262:0:0:0,-19.2659,-203.842	0/1:75:41,34:41:1460:34:1220:-87.3019,0,-109.119	0/1:203:105,98:105:3745:98:3516:-255.336,0,-276.141	0/0:271:271,0:271:9671:0:0:0,-81.5791,-870.345	0/0:29:29,0:29:1026:0:0:0,-8.72987,-92.6513	0/1:247:128,119:128:4550:119:4238:-307.19,0,-335.314	0/1:163:88,75:88:3125:75:2654:-190.016,0,-232.408	0/1:121:79,42:79:2811:42:1492:-98.1362,0,-216.805	0/0:241:241,0:241:8565:0:0:0,-72.5482,-770.852	0/0:770:770,0:770:27370:0:0:0,-231.793,-2462.52	0/0:444:443,1:443:15813:1:36:0,-130.059,-1419.26	0/0:859:855,3:855:30408:3:104:0,-248.937,-2725.74	0/0:689:686,3:686:24389:3:108:0,-197.334,-2184.28	0/1:183:81,102:81:2897:102:3657:-274.143,0,-205.876	0/0:123:123,0:123:4329:0:0:0,-37.0267,-389.789	0/0:324:324,0:324:11512:0:0:0,-97.5337,-1035.96	0/0:191:191,0:191:6815:0:0:0,-57.4967,-613.424	0/0:96:96,0:96:3418:0:0:0,-28.8989,-307.834	0/0:183:183,0:183:6461:0:0:0,-55.0885,-581.558	0/0:218:218,0:218:7794:0:0:0,-65.6245,-701.49	0/0:52:51,1:51:1788:1:36:0,-12.0553,-157.601	0/1:62:30,32:30:1068:32:1120:-82.4273,0,-77.7682	0/1:135:69,66:69:2441:66:2368:-172.739,0,-179.305	0/0:59:59,0:59:2104:0:0:0,-17.7608,-189.63	0/0:136:136,0:136:4845:0:0:0,-40.9401,-436.205	0/0:95:95,0:95:3383:0:0:0,-28.5978,-304.676	0/1:93:51,42:51:1804:42:1508:-107.974,0,-134.643	0/1:128:68,60:68:2423:60:2156:-155.722,0,-179.794	0/0:635:635,0:635:22579:0:0:0,-191.154,-2031.53	0/1:99:53,46:53:1891:46:1652:-119.156,0,-140.657	0/0:76:76,0:76:2720:0:0:0,-22.8783,-245.043	0/0:279:273,6:273:9667:6:208:0,-65.0251,-851.024	0/1:103:49,54:49:1748:54:1905:-140.717,0,-126.598	0/0:68:68,0:68:2432:0:0:0,-20.47,-219.136	0/0:438:431,7:431:15316:7:252:0,-108.822,-1355.14	0/0:562:562,0:562:20023:0:0:0,-169.179,-1801.59	0/0:101:101,0:101:3590:0:0:0,-30.404,-323.302	0/1:122:54,68:54:1936:68:2444:-183.461,0,-137.791	0/0:246:246,0:246:8782:0:0:0,-74.0534,-790.368	0/0:128:128,0:128:4553:0:0:0,-38.5318,-409.938	0/1:141:92,49:92:3288:49:1752:-115.487,0,-253.695	0/1:55:49,6:49:1752:6:216:-3.23386,0,-141.407	0/1:62:41,21:41:1454:21:756:-49.7034,0,-112.491	0/1:128:80,47:80:2864:47:1688:-113.762,0,-219.555	0/0:129:129,0:129:4596:0:0:0,-38.8329,-413.804	0/0:443:443,0:443:15734:0:0:0,-133.356,-1415.75	0/1:17:10,7:10:352:7:252:-17.9114,0,-26.9007	0/1:55:26,29:26:927:29:1044:-77.6477,0,-67.1907	0/0:329:323,5:323:11499:5:180:0,-82.5564,-1018.23	0/0:173:173,0:173:6139:0:0:0,-52.0782,-552.613	0/1:88:47,41:47:1667:41:1446:-103.909,0,-123.826	0/1:132:74,58:74:2629:58:2046:-144.608,0,-197.12	0/0:131:130,1:130:4660:1:36:0,-35.8367,-415.963	0/0:94:94,0:94:3343:0:0:0,-28.2968,-301.088	0/1:66:27,39:27:972:39:1396:-106.071,0,-67.9299	0/0:527:523,4:523:18631:4:144:0,-145.329,-1663.06	0/0:86:86,0:86:3084:0:0:0,-25.8886,-277.788	0/1:103:48,55:48:1707:55:1976:-146.891,0,-122.909	0/0:146:145,1:145:5170:1:36:0,-40.3521,-461.843	0/0:73:73,0:73:2559:0:0:0,-21.9752,-230.56	0/1:93:36,57:36:1266:57:2036:-155.502,0,-86.2453	0/0:57:57,0:57:1995:0:0:0,-17.1587,-179.821	0/0:134:134,0:134:4808:0:0:0,-40.338,-432.874	0/1:31:18,13:18:640:13:464:-32.7656,0,-48.5974	0/0:90:90,0:90:3185:0:0:0,-27.0927,-286.875	0/1:78:40,38:40:1432:38:1364:-99.5699,0,-105.697	0/0:327:297,30:297:10510:30:1060:0,-2.80598,-850.195	0/1:569:488,81:488:17297:81:2891:-89.1068,0,-1385.08	0/1:69:18,51:18:615:51:1824:-143.664,0,-34.8967	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:93:93,0:93:3296:0:0:0,-27.9958,-296.859
chr12	23375455	.	C	T	105686	PASS	AB=0.562391;ABP=138.219;AC=142;AF=0.755319;AN=188;AO=6438;CIGAR=1X;DP=8202;DPB=8202;DPRA=0;EPP=13982.9;EPPR=3831.32;GTI=1;LEN=1;MEANALT=1.01064;MQM=32.4537;MQMR=44.6948;NS=94;NUMALT=1;ODDS=0.00359441;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=229293;QR=61868;RO=1763;RPL=6438;RPP=13982.9;RPPR=3831.32;RPR=0;RUN=1;SAF=6438;SAP=13982.9;SAR=0;SRF=1763;SRP=3831.32;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:69:0,69:0:0:69:2459:-180.496,-20.7711,0	0/1:102:43,59:43:1514:59:2107:-123.44,0,-101.427	0/1:107:54,53:54:1898:53:1900:-105.573,0,-135.474	1/1:170:1,169:1:36:169:6005:-476.132,-47.6017,0	0/1:63:38,25:38:1309:25:900:-49.6252,0,-97.6616	0/1:56:28,28:28:992:28:1008:-58.4111,0,-70.6083	1/1:71:0,71:0:0:71:2548:-195.791,-21.3731,0	0/1:138:55,83:55:1912:83:2963:-175.728,0,-125.197	0/1:76:35,41:35:1230:41:1451:-85.3064,0,-86.2421	1/1:75:0,75:0:0:75:2661:-214.783,-22.5773,0	1/1:85:0,84:0:0:84:3003:-242.089,-25.2865,0	0/1:75:38,37:38:1338:37:1302:-73.7318,0,-95.5694	0/1:60:23,37:23:801:37:1324:-79.5705,0,-53.2049	1/1:90:0,90:0:0:90:3195:-248.385,-27.0927,0	1/1:46:1,45:1:36:45:1589:-124.347,-10.2739,0	0/1:83:43,40:43:1510:40:1436:-84.0422,0,-108.956	1/1:39:0,39:0:0:39:1400:-105.523,-11.7402,0	1/1:19:0,19:0:0:19:684:-50.8869,-5.71957,0	1/1:37:0,37:0:0:37:1328:-97.5624,-11.1381,0	0/1:145:62,83:62:2224:83:2951:-193.887,0,-154.712	0/1:156:63,93:63:2174:93:3340:-209.761,0,-146.235	1/1:120:0,120:0:0:120:4288:-314.987,-36.1236,0	1/1:97:1,96:1:36:96:3399:-266.898,-25.6265,0	1/1:58:3,55:3:108:55:1955:-142.666,-7.49561,0	0/1:72:33,39:33:1132:39:1385:-86.1051,0,-78.9926	0/1:253:90,163:90:3126:163:5815:-353.176,0,-199.29	1/1:230:1,229:1:36:229:8172:-629.773,-65.6783,0	1/1:18:0,18:0:0:18:648:-49.9762,-5.41854,0	0/1:157:58,99:58:2065:99:3535:-208.383,0,-135.147	0/1:140:51,89:51:1813:89:3144:-202.184,0,-116.936	0/1:71:35,36:35:1239:36:1268:-79.6619,0,-89.1195	0/1:23:5,18:5:162:18:648:-43.9916,0,-7.86091	1/1:33:0,33:0:0:33:1180:-91.1724,-9.93399,0	1/1:14:0,14:0:0:14:504:-37.4727,-4.21442,0	0/1:22:5,17:5:180:17:612:-39.2809,0,-9.10181	0/1:36:12,24:12:428:24:845:-52.1337,0,-27.1365	0/1:163:72,91:72:2508:91:3260:-191.766,0,-170.283	1/1:149:0,149:0:0:149:5309:-410.011,-44.8535,0	1/1:72:0,72:0:0:72:2567:-191.151,-21.6742,0	0/1:8:1,7:1:36:7:248:-15.3186,0,-1.12788	1/1:77:0,77:0:0:77:2759:-214.749,-23.1793,0	1/1:56:0,56:0:0:56:1994:-151.238,-16.8577,0	1/1:145:0,145:0:0:145:5178:-397.912,-43.6494,0	1/1:43:0,43:0:0:43:1527:-124.362,-12.9443,0	0/1:36:15,21:15:532:21:756:-48.7391,0,-36.7682	0/1:105:53,52:53:1853:52:1859:-102.772,0,-132.182	1/1:107:0,107:0:0:107:3805:-281.417,-32.2102,0	1/1:136:0,136:0:0:136:4850:-392.38,-40.9401,0	1/1:85:0,85:0:0:85:2983:-240.417,-25.5876,0	0/1:140:61,79:61:2139:79:2836:-187.489,0,-149.336	0/1:138:71,67:71:2513:67:2387:-134.561,0,-180.829	1/1:28:0,28:0:0:28:993:-80.639,-8.42884,0	0/1:104:41,63:41:1412:63:2228:-135.061,0,-92.4048	0/1:99:42,57:42:1492:57:2014:-119.946,0,-102	0/1:14:4,10:4:144:10:360:-21.9192,0,-8.35552	0/1:121:40,81:40:1424:81:2889:-187.269,0,-90.2758	1/1:22:0,22:0:0:22:788:-62.6474,-6.62266,0	0/1:36:9,27:9:315:27:945:-59.7902,0,-17.1509	1/1:17:0,17:0:0:17:608:-45.5058,-5.11751,0	1/1:109:0,109:0:0:109:3874:-300.557,-32.8123,0	0/1:115:59,56:59:2063:56:1995:-125.686,0,-147.259	1/1:11:0,11:0:0:11:387:-31.9071,-3.31133,0	1/1:142:0,142:0:0:142:5083:-371.392,-42.7463,0	1/1:163:1,162:1:36:162:5768:-461.878,-45.4945,0	1/1:71:4,67:4:140:67:2396:-173.736,-9.57743,0	0/1:75:31,44:31:1108:44:1580:-104.559,0,-75.5614	0/1:101:55,46:55:1934:46:1619:-99.218,0,-142.378	1/1:244:0,244:0:0:244:8667:-699.148,-73.4513,0	1/1:51:0,51:0:0:51:1819:-142.506,-15.3525,0	0/1:44:25,19:25:862:19:668:-37.5366,0,-62.634	0/1:35:15,20:15:505:20:716:-42.2375,0,-34.127	0/1:26:14,12:14:496:12:419:-26.4883,0,-35.9415	1/1:169:0,169:0:0:169:5981:-446.719,-50.8741,0	1/1:73:0,73:0:0:73:2588:-191.981,-21.9752,0	0/1:184:85,99:85:3009:99:3539:-216.764,0,-212.097	1/1:117:0,117:0:0:117:4171:-335.715,-35.2205,0	1/1:193:0,193:0:0:193:6867:-507.278,-58.0988,0	0/1:88:41,47:41:1419:47:1684:-95.3216,0,-99.44	0/1:48:16,32:16:557:32:1140:-70.1679,0,-35.1305	1/1:56:0,56:0:0:56:1995:-153.053,-16.8577,0	0/1:61:26,35:26:915:35:1244:-73.9273,0,-62.8247	1/1:143:0,143:0:0:143:5112:-412.477,-43.0473,0	1/1:44:0,44:0:0:44:1541:-123.238,-13.2453,0	0/1:68:31,37:31:1086:37:1320:-86.9333,0,-76.9753	1/1:39:0,39:0:0:39:1387:-111.908,-11.7402,0	1/1:113:1,112:1:36:112:4005:-318.872,-30.4272,0	0/1:21:7,14:7:229:14:500:-31.4119,0,-14.3314	1/1:61:0,61:0:0:61:2175:-160.593,-18.3628,0	0/1:64:31,33:31:1100:33:1180:-68.5086,0,-77.2575	0/1:76:37,39:37:1298:39:1387:-85.5245,0,-92.314	0/1:162:75,87:75:2628:87:3077:-189.099,0,-184.465	0/1:32:22,10:22:780:10:356:-18.65,0,-58.6927	1/1:121:0,121:0:0:121:4313:-348.001,-36.4246,0	1/1:75:0,75:0:0:75:2645:-213.151,-22.5773,0
chr12	23441220	.	ACTTTC	TTTTTA,ATTTTA	415878	PASS	AB=0.566514,0.428344;ABP=414.067,480.074;AC=142,46;AF=0.755319,0.244681;AN=188;AO=15450,4623;CIGAR=2X3M1X,1M1X3M1X;DP=20148;DPB=20149.7;DPRA=0,2.65525;EPP=33552.3,10041.7;EPPR=0;GTI=0;LEN=6,6;MEANALT=2.3617,2.93548;MQM=59.9676,59.9689;MQMR=0;NS=94;NUMALT=2;ODDS=12.9142;PAIRED=0,0;PAIREDR=0;PAO=9,0;PQA=274,0;PQR=0;PRO=0;QA=539345,161656;QR=0;RO=0;RPL=15450,4623;RPP=33552.3,10041.7;RPPR=0;RPR=0,0;RUN=1,1;SAF=15450,4623;SAP=33552.3,10041.7;SAR=0,0;SRF=0;SRP=0;SRR=0;TYPE=complex,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:30:0,30,0:0:0:30,0:1037,0:-93.638,-9.0309,0,-93.638,-9.0309,-93.638	1/2:251:0,115,135:0:0:115,135:4018,4739:-712.551,-385.703,-351.085,-326.867,0,-286.228	1/2:129:0,77,52:0:0:77,52:2711,1805:-367.782,-147.075,-123.896,-221.056,0,-205.402	1/1:199:0,199,0:0:0:199,0:6896,0:-620.726,-59.905,0,-620.726,-59.905,-620.726	1/2:67:0,32,35:0:0:32,35:1089,1197:-185.832,-97.4942,-87.8612,-88.679,0,-78.143	1/2:54:0,31,23:0:0:31,23:1083,813:-154.662,-66.5674,-57.2354,-88.4466,0,-81.5229	1/1:101:0,100,0:0:0:100,0:3484,0:-313.517,-30.103,0,-313.517,-30.103,-313.517	1/2:150:0,84,66:0:0:84,66:2911,2248:-419.311,-182.71,-157.424,-236.943,0,-217.075	1/2:85:0,52,33:0:0:52,33:1789,1152:-239.337,-94.052,-78.3984,-145.632,0,-135.698	1/1:95:0,95,0:0:0:95,0:3260,0:-293.629,-28.5979,0,-293.629,-28.5979,-293.629	1/1:329:0,328,0:0:0:328,0:11513,0:-1035.76,-98.7378,0,-1035.76,-98.7378,-1035.76	1/2:30:0,16,14:0:0:16,14:552,455:-81.9003,-37.0457,-32.2292,-45.1888,0,-40.9744	1/2:33:0,12,21:0:0:12,21:425,726:-93.9616,-59.3377,-55.7253,-34.9748,0,-28.6532	1/1:61:0,61,0:0:0:61,0:2098,0:-189.091,-18.3628,0,-189.091,-18.3628,-189.091	1/1:36:0,36,0:0:0:36,0:1259,0:-113.612,-10.8371,0,-113.612,-10.8371,-113.612	1/2:17:0,10,7:0:0:10,7:345,234:-47.3139,-19.2794,-16.2691,-28.3731,0,-26.2659	1/1:52:0,52,0:0:0:52,0:1834,0:-165.342,-15.6536,0,-165.342,-15.6536,-165.342	1/1:25:0,23,1:0:0:23,1:799,36:-71.9195,-6.92369,0,-68.9814,-3.93135,-68.6804	1/1:117:0,115,2:0:0:115,2:4042,58:-363.659,-34.6185,0,-359.043,-30.0487,-358.441	1/2:135:0,72,63:0:0:72,63:2511,2229:-386.13,-181.911,-160.236,-204.57,0,-185.606	1/2:110:0,67,41:0:0:67,41:2328,1411:-303.876,-114.611,-94.4416,-189.28,0,-176.938	1/1:116:0,116,0:0:0:116,0:4056,0:-365.236,-34.9195,0,-365.236,-34.9195,-365.236	1/1:41:0,41,0:0:0:41,0:1400,0:-126.293,-12.3422,0,-126.293,-12.3422,-126.293	1/1:118:0,116,2:0:0:116,2:4029,72:-362.451,-34.9195,0,-356.576,-28.6848,-355.974	1/2:60:0,35,25:0:0:35,25:1233,878:-172.199,-71.8123,-61.2762,-100.738,0,-93.212	1/2:204:0,64,140:0:0:64,140:2246,4902:-581.986,-399.199,-379.933,-183.137,0,-140.993	1/1:192:0,192,0:0:0:192,0:6677,0:-601.032,-57.7978,0,-601.032,-57.7978,-601.032	1/1:9:0,9,0:0:0:9,0:309,0:-28.1426,-2.70927,0,-28.1426,-2.70927,-28.1426	1/2:204:0,124,77:0:0:124,77:4329,2711:-572.861,-220.743,-183.416,-352.156,0,-328.977	1/2:446:0,280,165:0:0:280,165:9806,5820:-1271.88,-474.001,-389.713,-797.976,0,-748.306	1/2:83:0,27,55:0:0:27,55:916,1915:-229.999,-155.721,-147.593,-74.2709,0,-57.7143	1/2:986:0,547,436:0:0:547,436:19125,15198:-2791.95,-1236.09,-1071.42,-1555.95,0,-1424.71	1/1:615:0,614,1:0:0:614,1:21515,36:-1935.51,-184.832,0,-1932.57,-181.535,-1932.27	1/1:724:0,723,1:0:0:723,1:25226,25:-2269.5,-217.645,0,-2267.55,-215.446,-2267.25	1/2:566:0,327,237:0:0:327,237:11421,8248:-1599.77,-670.743,-572.306,-929.116,0,-857.772	1/2:406:0,234,170:0:0:234,170:8199,6012:-1156.81,-489.767,-419.326,-667.146,0,-615.971	1/2:108:0,49,58:0:0:49,58:1715,2054:-306.955,-167.421,-152.67,-139.633,0,-122.174	1/1:240:0,239,1:0:0:239,1:8272,23:-744.291,-71.9462,0,-742.523,-69.9473,-742.222	1/1:228:0,227,0:0:0:227,0:7935,0:-713.93,-68.3338,0,-713.93,-68.3338,-713.93	1/2:178:0,74,102:0:0:74,102:2599,3562:-501.389,-289.855,-267.579,-211.651,0,-180.946	1/1:181:0,181,0:0:0:181,0:6346,0:-571.249,-54.4864,0,-571.249,-54.4864,-571.249	1/1:121:0,120,0:0:0:120,0:4158,0:-374.175,-36.1236,0,-374.175,-36.1236,-374.175	1/1:141:0,140,0:0:0:140,0:4920,0:-442.712,-42.1442,0,-442.712,-42.1442,-442.712	1/1:27:0,27,0:0:0:27,0:943,0:-85.1843,-8.12781,0,-85.1843,-8.12781,-85.1843	1/2:36:0,22,14:0:0:22,14:758,499:-102.595,-41.0312,-34.4085,-61.9156,0,-57.7011	1/2:49:0,27,21:0:0:27,21:918,730:-133.795,-59.3381,-51.2103,-74.4425,0,-68.1209	1/1:142:0,142,0:0:0:142,0:4953,0:-445.935,-42.7463,0,-445.935,-42.7463,-445.935	1/1:183:0,182,1:0:0:182,1:6366,36:-572.689,-54.7875,0,-569.752,-51.4902,-569.451	1/1:138:0,138,0:0:0:138,0:4810,0:-433.067,-41.5421,0,-433.067,-41.5421,-433.067	1/2:99:0,61,37:0:0:61,37:2135,1310:-280.555,-106.849,-88.4863,-173.843,0,-162.705	1/2:151:0,78,73:0:0:78,73:2713,2550:-428.365,-207.779,-184.298,-220.935,0,-198.959	1/1:1205:0,1199,2:0:0:1199,2:41990,71:-3776.87,-360.935,0,-3771.31,-355.366,-3770.71	1/2:159:0,95,64:0:0:95,64:3348,2212:-452.673,-180.078,-151.48,-272.944,0,-253.678	1/2:91:0,47,43:0:0:47,43:1652,1497:-256.335,-121.864,-107.716,-134.606,0,-121.662	1/2:977:0,522,453:0:0:522,453:18252,15793:-2768.91,-1284.09,-1126.95,-1484.88,0,-1348.51	1/2: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chr12	23455180	.	G	A	40585	PASS	AB=0.43094;ABP=260.344;AC=45;AF=0.239362;AN=188;AO=2691;CIGAR=1X;DP=13503;DPB=13503;DPRA=1.20327;EPP=5846.44;EPPR=23454.9;GTI=2;LEN=1;MEANALT=1.13208;MQM=59.9647;MQMR=59.9851;NS=94;NUMALT=1;ODDS=0.513826;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=94089;QR=386275;RO=10800;RPL=0;RPP=5846.44;RPPR=23454.9;RPR=2691;RUN=1;SAF=2691;SAP=5846.44;SAR=0;SRF=10800;SRP=23454.9;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:27:27,0:27:972:0:0:0,-8.12781,-87.6075	0/1:280:133,147:133:4772:147:5194:-383.315,0,-345.347	0/1:138:80,58:80:2868:58:2041:-142.393,0,-216.815	0/0:347:344,2:344:12281:2:72:0,-97.6795,-1098.21	0/1:74:40,34:40:1440:34:1196:-85.6691,0,-107.622	0/1:121:55,66:55:1967:66:2296:-170.472,0,-140.88	0/0:188:188,0:188:6713:0:0:0,-56.5936,-604.244	0/1:264:159,105:159:5685:105:3661:-250.219,0,-432.296	0/1:162:89,73:89:3179:73:2548:-180.799,0,-237.511	0/0:173:173,0:173:6193:0:0:0,-52.0782,-557.238	0/0:70:70,0:70:2503:0:0:0,-21.0721,-225.521	0/1:100:62,38:62:2215:38:1337:-90.5249,0,-169.511	0/1:75:48,27:48:1719:27:938:-62.152,0,-132.418	0/0:73:73,0:73:2608:0:0:0,-21.9752,-234.968	0/0:119:119,0:119:4244:0:0:0,-35.8226,-382.138	0/1:68:36,32:36:1296:32:1120:-80.6357,0,-96.4739	0/0:85:85,0:85:3039:0:0:0,-25.5875,-273.74	0/0:92:92,0:92:3277:0:0:0,-27.6948,-295.149	0/0:67:67,0:67:2403:0:0:0,-20.169,-216.526	0/1:281:156,125:156:5573:125:4397:-311.312,0,-417.101	0/1:255:155,100:155:5537:100:3545:-242.497,0,-421.692	0/0:106:105,0:105:3760:0:0:0,-31.6081,-338.24	0/0:172:172,0:172:6176:0:0:0,-51.7772,-555.936	0/0:129:127,2:127:4543:2:68:0,-32.3752,-402.579	0/1:133:63,70:63:2237:70:2372:-173.69,0,-161.555	0/1:519:289,227:289:10361:227:7899:-555.303,0,-776.766	0/0:466:466,0:466:16674:0:0:0,-140.28,-1500.31	0/0:66:66,0:66:2368:0:0:0,-19.868,-213.378	0/1:385:227,158:227:8091:158:5486:-377.916,0,-612.31	0/1:215:111,104:111:3960:104:3663:-265.152,0,-291.871	0/1:187:115,72:115:4105:72:2549:-173.368,0,-313.342	0/1:14:10,4:10:360:4:144:-9.0992,0,-28.5299	0/0:32:32,0:32:1152:0:0:0,-9.63296,-103.99	0/0:12:12,0:12:432:0:0:0,-3.61236,-39.2212	0/1:13:6,7:6:216:7:222:-16.3758,0,-15.8771	0/1:17:13,4:13:468:4:114:-5.4242,0,-37.3421	0/1:263:154,109:154:5515:109:3813:-264.195,0,-417.304	0/0:251:251,0:251:8965:0:0:0,-75.5585,-806.832	0/0:103:103,0:103:3674:0:0:0,-31.0061,-330.863	0/0:4:4,0:4:144:0:0:0,-1.20412,-13.3136	0/0:259:259,0:259:9283:0:0:0,-77.9668,-835.435	0/0:57:57,0:57:2035:0:0:0,-17.1587,-183.422	0/0:97:96,0:96:3444:0:0:0,-28.8989,-309.813	0/0:147:147,0:147:5246:0:0:0,-44.2514,-472.278	0/1:75:43,32:43:1548:32:1129:-79.3391,0,-117.036	0/1:118:55,63:55:1976:63:2147:-157.966,0,-142.593	0/0:189:185,1:185:6632:1:36:0,-52.7531,-593.359	0/0:318:317,1:317:11335:1:36:0,-92.1293,-1016.43	0/0:203:203,0:203:7257:0:0:0,-61.1091,-653.182	0/1:145:90,55:90:3228:55:1938:-131.044,0,-247.092	0/1:103:71,32:71:2548:32:1144:-72.2634,0,-198.564	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/1:143:84,59:84:2992:59:2019:-138.928,0,-226.466	0/1:57:36,21:36:1296:21:737:-49.4919,0,-99.7852	0/1:20:12,8:12:432:8:284:-19.8828,0,-33.2006	0/1:161:103,58:103:3660:58:2000:-131.74,0,-281.138	0/0:100:100,0:100:3554:0:0:0,-30.103,-320.067	0/1:19:11,8:11:392:8:273:-19.1806,0,-29.9005	0/0:17:17,0:17:608:0:0:0,-5.11751,-55.052	0/0:105:105,0:105:3760:0:0:0,-31.6081,-338.6	0/1:111:62,49:62:2219:49:1740:-123.468,0,-166.559	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.7443	0/0:290:290,0:290:10355:0:0:0,-87.2987,-931.803	0/0:405:403,1:403:14447:1:36:0,-118.378,-1296.38	0/0:101:96,5:96:3409:5:180:0,-13.852,-290.473	0/1:127:74,53:74:2633:53:1873:-130.618,0,-198.985	0/1:304:184,119:184:6592:119:4132:-280.492,0,-501.788	0/0:144:144,0:144:5164:0:0:0,-43.3483,-464.9	0/0:49:49,0:49:1756:0:0:0,-14.7505,-158.324	0/1:103:69,34:69:2456:34:1201:-77.3876,0,-190.289	0/1:115:85,30:85:3035:30:1042:-59.467,0,-238.762	0/1:30:20,10:20:701:10:352:-22.9873,0,-54.3808	0/0:157:157,0:157:5596:0:0:0,-47.2617,-503.766	0/0:113:113,0:113:4020:0:0:0,-34.0164,-361.052	0/1:288:147,141:147:5264:141:5005:-363.903,0,-387.2	0/0:208:208,0:208:7445:0:0:0,-62.6142,-670.093	0/0:177:177,0:177:6313:0:0:0,-53.2823,-568.263	0/1:159:84,75:84:3012:75:2643:-190.247,0,-223.447	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	0/0:175:175,0:175:6283:0:0:0,-52.6802,-565.56	0/1:133:67,66:67:2400:66:2306:-167.759,0,-176.22	0/0:377:376,1:376:13456:1:32:0,-110.289,-1207.63	0/0:125:125,0:125:4471:0:0:0,-37.6287,-402.559	0/1:63:34,29:34:1215:29:1027:-73.7764,0,-90.6909	0/0:141:140,1:140:5011:1:36:0,-38.847,-447.538	0/0:222:222,0:222:7956:0:0:0,-66.8287,-716.062	0/1:62:32,30:32:1148:30:1015:-72.9869,0,-84.966	0/0:127:127,0:127:4556:0:0:0,-38.2308,-410.205	0/1:85:51,34:51:1828:34:1209:-83.5266,0,-139.213	0/1:40:25,15:25:887:15:528:-35.8102,0,-68.1069	0/1:76:43,32:43:1548:32:1077:-74.2894,0,-116.676	0/1:107:46,61:46:1648:61:2129:-159.667,0,-116.398	0/0:182:182,0:182:6501:0:0:0,-54.7875,-585.174	0/0:200:200,0:200:7143:0:0:0,-60.206,-642.929
chr12	23612116	.	T	C	208861	PASS	AB=0.528204;ABP=49.8015;AC=140;AF=0.744681;AN=188;AO=9958;CIGAR=1X;DP=13186;DPB=13186;DPRA=0;EPP=21626.5;EPPR=6988.64;GTI=1;LEN=1;MEANALT=1.10638;MQM=59.7709;MQMR=59.9378;NS=94;NUMALT=1;ODDS=3.5263;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=356040;QR=115230;RO=3217;RPL=0;RPP=21626.5;RPPR=6988.64;RPR=9958;RUN=1;SAF=9958;SAP=21626.5;SAR=0;SRF=3217;SRP=6988.64;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:81:0,81:0:0:81:2896:-260.24,-24.3834,0	0/1:295:127,168:127:4544:168:6024:-453.383,0,-320.323	0/1:168:66,102:66:2372:102:3636:-276.778,0,-163.165	1/1:225:3,222:3:108:222:7920:-702.698,-57.6566,0	0/1:78:42,36:42:1504:36:1288:-92.7162,0,-112.174	0/1:105:50,55:50:1792:55:1972:-146.024,0,-129.954	1/1:166:0,166:0:0:166:5932:-533.808,-49.971,0	0/1:301:148,153:148:5312:153:5486:-403.163,0,-385.392	0/1:177:79,98:79:2798:98:3488:-260.828,0,-198.67	1/1:316:0,315:0:0:315:11264:-1011.85,-94.8245,0	0/1:89:35,54:35:1256:54:1927:-146.914,0,-86.5536	0/1:101:52,49:52:1872:49:1752:-127.544,0,-138.341	0/1:83:39,44:39:1387:44:1572:-116.778,0,-100.143	1/1:122:0,122:0:0:122:4370:-393.455,-36.7257,0	1/1:77:0,77:0:0:77:2768:-249.356,-23.1793,0	0/1:67:34,33:34:1224:33:1180:-86.3298,0,-90.298	1/1:127:0,127:0:0:127:4517:-406.463,-38.2308,0	1/1:84:0,83:0:0:83:2976:-267.852,-24.9855,0	1/1:81:1,80:1:36:80:2860:-254.031,-20.7852,0	0/1:257:113,144:113:4048:144:5164:-387.482,0,-287.143	0/1:214:115,99:115:4128:99:3540:-254.38,0,-307.283	1/1:113:0,113:0:0:113:4019:-361.899,-34.0164,0	1/1:47:0,47:0:0:47:1672:-150.765,-14.1484,0	0/1:244:90,154:90:3220:154:5492:-420.931,0,-216.563	0/1:98:48,50:48:1720:50:1772:-130.253,0,-125.585	0/1:454:195,259:195:7008:259:9272:-697.773,0,-494.112	1/1:413:0,413:0:0:413:14775:-1329.46,-124.325,0	1/1:35:0,35:0:0:35:1256:-113.345,-10.5361,0	0/1:289:136,152:136:4880:152:5444:-403.027,0,-352.295	0/1:212:103,109:103:3692:109:3920:-289.15,0,-268.664	0/1:155:85,70:85:3036:70:2508:-179.306,0,-226.811	0/1:26:13,13:13:453:13:464:-34.2661,0,-33.268	1/1:54:3,51:3:108:51:1822:-154.18,-6.18045,0	1/1:47:0,47:0:0:47:1668:-150.404,-14.1484,0	0/1:13:3,10:3:108:10:360:-28.8309,0,-6.16178	0/1:25:10,15:10:360:15:540:-41.4026,0,-25.2186	0/1:233:105,128:105:3772:128:4600:-344.017,0,-269.538	1/1:232:0,232:0:0:232:8312:-748.025,-69.839,0	1/1:118:0,118:0:0:118:4215:-379.523,-35.5215,0	0/1:7:5,2:5:176:2:72:-4.72951,0,-14.0778	1/1:147:1,146:1:36:146:5236:-467.76,-40.6531,0	1/1:43:0,43:0:0:43:1539:-138.802,-12.9443,0	1/1:210:1,209:1:36:209:7468:-668.292,-59.618,0	1/1:111:0,111:0:0:111:3980:-358.383,-33.4143,0	0/1:92:54,38:54:1940:38:1364:-95.3613,0,-147.181	0/1:137:37,99:37:1324:99:3544:-277.81,0,-76.71	1/1:136:0,135:0:0:135:4820:-433.71,-40.6391,0	1/1:186:0,186:0:0:186:6646:-598.2,-55.9916,0	1/1:151:0,151:0:0:151:5407:-486.744,-45.4555,0	0/1:281:146,135:146:5224:135:4848:-351.875,0,-385.709	0/1:163:73,88:73:2616:88:3152:-235.08,0,-186.862	1/1:31:0,31:0:0:31:1116:-100.752,-9.33193,0	0/1:166:89,77:89:3173:77:2736:-196.505,0,-235.822	0/1:127:85,42:85:3029:42:1508:-97.7829,0,-234.609	0/1:39:9,30:9:324:30:1068:-84.6804,0,-17.7657	0/1:149:85,64:85:3056:64:2294:-161.856,0,-230.414	1/1:44:0,44:0:0:44:1567:-141.305,-13.2453,0	0/1:32:4,28:4:144:28:988:-79.541,0,-3.68066	1/1:23:0,23:0:0:23:828:-74.8432,-6.92369,0	1/1:162:0,162:0:0:162:5771:-519.496,-48.7669,0	0/1:97:52,45:52:1868:45:1611:-116.077,0,-139.199	1/1:15:0,15:0:0:15:540:-48.9319,-4.51545,0	1/1:213:0,213:0:0:213:7601:-684.102,-64.1194,0	1/1:159:1,158:1:36:158:5648:-504.829,-44.2655,0	1/1:267:14,253:14:500:253:9032:-767.462,-35.0388,0	0/1:123:60,63:60:2121:63:2240:-164.281,0,-154.131	0/1:280:131,149:131:4696:149:5327:-395.251,0,-338.509	1/1:174:2,172:2:72:172:6160:-547.657,-45.5425,0	1/1:57:0,57:0:0:57:2043:-184.116,-17.1587,0	0/1:93:42,51:42:1512:51:1816:-135.722,0,-108.379	0/1:101:63,38:63:2252:38:1355:-91.8457,0,-172.539	0/1:70:34,36:34:1216:36:1284:-94.7913,0,-88.6745	1/1:312:0,311:0:0:311:11117:-1000.17,-93.6203,0	1/1:97:0,97:0:0:97:3476:-313.026,-29.1999,0	0/1:298:134,164:134:4804:164:5864:-438.11,0,-342.808	1/1:211:0,211:0:0:211:7540:-678.629,-63.5173,0	1/1:246:0,245:0:0:245:8776:-789.39,-73.7524,0	0/1:194:99,95:99:3560:95:3404:-248.063,0,-262.207	0/1:34:15,19:15:540:19:680:-51.2941,0,-38.6933	1/1:161:0,160:0:0:160:5713:-514.06,-48.1648,0	0/1:147:70,77:70:2493:77:2752:-203.608,0,-180.37	1/1:225:1,224:1:36:224:7996:-716.043,-64.1335,0	1/1:117:0,117:0:0:117:4191:-377.354,-35.2205,0	0/1:54:30,24:30:1080:24:846:-60.2022,0,-81.2576	1/1:104:0,104:0:0:104:3710:-334.1,-31.3071,0	1/1:193:0,193:0:0:193:6881:-619.333,-58.0988,0	0/1:41:18,23:18:644:23:820:-61.7803,0,-45.9484	1/1:96:0,96:0:0:96:3425:-308.312,-28.8989,0	0/1:84:42,41:42:1504:41:1472:-107.431,0,-110.301	0/1:90:31,59:31:1108:59:2120:-163.962,0,-72.9383	0/1:116:46,70:46:1648:70:2494:-189.782,0,-113.689	0/1:73:48,25:48:1724:25:892:-58.6212,0,-133.47	1/1:61:0,61:0:0:61:2184:-196.812,-18.3628,0	1/1:124:0,124:0:0:124:4435:-399.311,-37.3277,0
chr12	23782758	.	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chr12	23910969	.	G	C	214804	PASS	AB=0.523642;ABP=30.6303;AC=142;AF=0.755319;AN=188;AO=10047;CIGAR=1X;DP=12771;DPB=12771;DPRA=0;EPP=21819.8;EPPR=5911.59;GTI=2;LEN=1;MEANALT=1.03191;MQM=59.9936;MQMR=59.9971;NS=94;NUMALT=1;ODDS=1.00087;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=359517;QR=96823;RO=2721;RPL=0;RPP=21819.8;RPPR=5911.59;RPR=10047;RUN=1;SAF=10047;SAP=21819.8;SAR=0;SRF=2721;SRP=5911.59;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:74:0,74:0:0:74:2648:-238.567,-22.2762,0	0/1:151:64,87:64:2258:87:3120:-235.571,0,-158.025	0/1:178:82,95:82:2925:95:3400:-252.612,0,-209.881	1/1:308:1,307:1:36:307:10972:-983.781,-89.119,0	0/1:92:35,57:35:1233:57:2048:-156.897,0,-83.5773	0/1:77:48,29:48:1724:29:1044:-71.0955,0,-132.266	1/1:208:0,208:0:0:208:7433:-669.016,-62.6142,0	0/1:167:73,94:73:2620:94:3363:-252.614,0,-185.775	0/1:131:76,55:76:2694:55:1968:-137.96,0,-203.267	1/1:183:1,182:1:36:182:6509:-582.295,-51.4902,0	0/1:80:47,33:47:1643:33:1184:-82.7859,0,-124.069	0/1:129:73,56:73:2605:56:2008:-142.16,0,-195.864	0/1:129:55,74:55:1972:74:2644:-199.374,0,-138.922	1/1:88:0,88:0:0:88:3113:-280.396,-26.4906,0	1/1:124:0,124:0:0:124:4444:-400.13,-37.3277,0	0/1:76:39,37:39:1404:37:1332:-97.3041,0,-103.781	1/1:103:0,103:0:0:103:3689:-332.211,-31.0061,0	1/1:77:0,77:0:0:77:2755:-248.191,-23.1793,0	1/1:56:0,56:0:0:56:2007:-180.903,-16.8577,0	1/1:370:2,368:2:72:368:13172:-1178.45,-104.544,0	0/1:196:88,108:88:3084:108:3856:-288.235,0,-218.783	1/1:162:0,162:0:0:162:5808:-522.832,-48.7669,0	1/1:99:0,99:0:0:99:3529:-317.819,-29.802,0	0/1:134:55,79:55:1956:79:2828:-214.421,0,-135.978	0/1:140:69,71:69:2442:71:2528:-185.628,0,-177.888	0/1:421:206,215:206:7369:215:7692:-565.553,0,-536.523	1/1:281:0,281:0:0:281:10088:-907.849,-84.5894,0	1/1:73:0,73:0:0:73:2612:-235.328,-21.9752,0	0/1:322:140,182:140:4997:182:6520:-489.951,0,-352.946	0/1:94:47,47:47:1677:47:1688:-123.91,0,-122.918	0/1:122:46,76:46:1622:76:2709:-207.327,0,-109.539	0/1:11:5,6:5:176:6:212:-16.1135,0,-12.8737	1/1:16:0,16:0:0:16:576:-52.175,-4.81648,0	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	0/1:10:1,9:1:36:9:324:-26.4956,0,-0.587975	1/1:10:0,10:0:0:10:360:-32.7443,-3.0103,0	0/1:290:146,144:146:5183:144:5176:-378.679,0,-379.311	1/1:289:0,289:0:0:289:10331:-929.714,-86.9977,0	1/1:99:0,99:0:0:99:3552:-319.888,-29.802,0	0/1:12:6,6:6:201:6:216:-16.1782,0,-14.8047	1/1:135:0,135:0:0:135:4832:-435.035,-40.6391,0	1/1:55:0,55:0:0:55:1969:-177.485,-16.5567,0	1/1:217:0,217:0:0:217:7751:-697.621,-65.3235,0	1/1:121:0,121:0:0:121:4331:-389.965,-36.4246,0	0/1:92:51,41:51:1832:41:1459:-103.91,0,-137.466	0/1:135:65,69:65:2313:69:2468:-181.676,0,-167.731	1/1:220:0,220:0:0:220:7865:-707.877,-66.2266,0	1/1:220:0,220:0:0:220:7884:-709.585,-66.2266,0	1/1:237:0,237:0:0:237:8462:-761.581,-71.3441,0	0/1:162:72,90:72:2565:90:3232:-242.333,0,-182.332	0/1:200:92,108:92:3266:108:3872:-288.468,0,-233.953	0/1:15:2,13:2:72:13:468:-37.9442,0,-2.32127	0/1:194:83,111:83:2969:111:3969:-299,0,-209.038	0/1:43:31,12:31:1108:12:428:-25.9145,0,-87.0867	0/1:9:3,6:3:108:6:216:-17.0812,0,-7.3659	0/1:179:90,89:90:3224:89:3188:-233.259,0,-236.498	1/1:69:0,69:0:0:69:2468:-222.374,-20.7711,0	0/1:10:4,6:4:144:6:216:-16.7802,0,-10.3033	1/1:26:0,26:0:0:26:928:-83.8383,-7.82678,0	1/1:106:0,106:0:0:106:3758:-338.419,-31.9092,0	0/1:131:58,73:58:2038:73:2620:-196.612,0,-144.254	1/1:14:0,14:0:0:14:504:-45.6981,-4.21442,0	1/1:245:1,244:1:36:244:8736:-782.632,-70.1541,0	1/1:232:2,230:2:72:230:8208:-731.899,-63.0022,0	1/1:92:2,90:2:72:90:3205:-281.836,-20.858,0	0/1:114:55,59:55:1953:59:2108:-155.672,0,-141.726	0/1:241:104,137:104:3674:137:4905:-369.053,0,-258.316	1/1:160:3,156:3:108:156:5575:-491.799,-38.1484,0	1/1:41:0,41:0:0:41:1472:-132.776,-12.3422,0	1/1:92:1,91:1:36:91:3260:-290.022,-24.0965,0	0/1:105:47,58:47:1661:58:2074:-155.323,0,-118.167	0/1:16:8,8:8:273:8:288:-21.4509,0,-20.0837	1/1:122:0,122:0:0:122:4349:-391.585,-36.7257,0	1/1:99:0,99:0:0:99:3537:-318.516,-29.802,0	0/1:206:85,121:85:3014:121:4340:-328.762,0,-209.477	1/1:242:0,242:0:0:242:8650:-778.491,-72.8493,0	1/1:158:0,158:0:0:158:5629:-506.733,-47.5627,0	0/1:133:48,85:48:1709:85:3052:-234.872,0,-114.057	0/1:28:18,10:18:644:10:356:-23.9524,0,-49.8618	1/1:169:0,169:0:0:169:6052:-544.783,-50.8741,0	0/1:166:90,76:90:3224:76:2732:-196.151,0,-240.411	1/1:389:0,389:0:0:389:13925:-1252.91,-117.101,0	1/1:157:0,157:0:0:157:5640:-507.718,-47.2617,0	0/1:94:53,41:53:1877:41:1470:-104.299,0,-140.91	1/1:163:0,163:0:0:163:5840:-525.712,-49.0679,0	1/1:225:0,225:0:0:225:8092:-728.292,-67.7318,0	0/1:72:40,32:40:1436:32:1143:-81.5045,0,-107.864	1/1:141:0,141:0:0:141:5025:-452.397,-42.4452,0	0/1:91:42,49:42:1512:49:1764:-131.65,0,-108.981	0/1:53:23,30:23:828:30:1080:-81.5541,0,-58.8895	0/1:106:45,61:45:1620:61:2183:-164.826,0,-114.181	0/1:132:98,34:98:3470:34:1224:-70.7311,0,-272.775	1/1:173:0,173:0:0:173:6181:-556.387,-52.0782,0	1/1:128:0,128:0:0:128:4572:-411.645,-38.5318,0
chr12	24017163	.	AATGAA	AATGGG,AATGGA	151350	PASS	AB=0.52636,0.466349;ABP=24.5326,38.0851;AC=141,47;AF=0.75,0.25;AN=188;AO=5477,1676;CIGAR=4M2X,4M1X1M;DP=7214;DPB=7213.17;DPRA=0,1.07983;EPP=11896.2,3642.4;EPPR=7.35324;GTI=0;LEN=2,1;MEANALT=2.07447,2.43396;MQM=53.9584,59.9648;MQMR=60;NS=94;NUMALT=2;ODDS=0.598835;PAIRED=0,0;PAIREDR=0;PAO=0,0;PQA=0,0;PQR=0;PRO=0;QA=193734,59819;QR=68;RO=2;RPL=0,0;RPP=11896.2,3642.4;RPPR=7.35324;RPR=5477,1676;RUN=1,1;SAF=5477,1676;SAP=11896.2,3642.4;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=mnp,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:57:0,53,0:0:0:53,0:1846,0:-164.456,-15.9546,0,-164.456,-15.9546,-164.456	1/2:122:0,57,63:0:0:57,63:2024,2245:-347.269,-182.987,-165.828,-164.277,0,-145.312	1/2:90:0,47,43:0:0:47,43:1672,1548:-262.536,-126.669,-112.52,-136.225,0,-123.281	1/2:139:0,85,52:0:0:85,52:3005,1858:-395.851,-151.611,-126.024,-244.359,0,-228.706	1/2:50:0,25,25:0:0:25,25:889,900:-146.049,-73.7953,-66.2695,-72.6112,0,-65.0854	1/2:17:0,6,10:0:0:6,10:216,360:-46.9542,-29.3787,-27.5725,-17.5791,0,-14.5688	1/1:103:0,102,0:0:0:102,0:3628,0:-325.815,-30.7051,0,-325.815,-30.7051,-325.815	1/2:125:0,69,56:0:0:69,56:2438,2008:-359.837,-163.866,-143.095,-196.325,0,-179.467	1/2:57:0,31,26:0:0:31,26:1103,936:-165.834,-76.7327,-67.4008,-89.4584,0,-81.6317	1/1:95:0,95,0:0:0:95,0:3362,0:-302.548,-28.5979,0,-302.548,-28.5979,-302.548	1/2:34:0,21,13:0:0:21,13:746,468:-99.1984,-38.5463,-32.2246,-61.0099,0,-57.0965	1/2:67:0,31,36:0:0:31,36:1110,1283:-195.207,-104.936,-95.6036,-90.6283,0,-79.7913	1/2:48:0,23,24:0:0:23,24:820,849:-135.734,-69.249,-62.3254,-66.5829,0,-59.3581	1/2:39:0,19,20:0:0:19,20:682,720:-114.633,-59.1082,-53.3886,-55.8841,0,-49.8635	1/1:28:0,28,0:0:0:28,0:998,0:-89.984,-8.42884,0,-89.984,-8.42884,-89.984	1/2:42:0,23,19:0:0:23,19:811,680:-121.609,-55.8096,-48.8859,-66.1546,0,-60.435	1/1:16:0,16,0:0:0:16,0:574,0:-51.8661,-4.81648,0,-51.8661,-4.81648,-51.8661	1/1:18:0,18,0:0:0:18,0:648,0:-58.3218,-5.41854,0,-58.3218,-5.41854,-58.3218	1/1:31:0,31,0:0:0:31,0:1103,0:-98.2103,-9.33193,0,-98.2103,-9.33193,-98.2103	1/1:149:0,147,0:0:0:147,0:5204,0:-467.371,-44.2514,0,-467.371,-44.2514,-467.371	1/2:111:0,72,39:0:0:72,39:2578,1404:-324.249,-114.915,-93.2403,-209.694,0,-197.953	1/1:90:0,90,0:0:0:90,0:3202,0:-287.597,-27.0927,0,-287.597,-27.0927,-287.597	1/1:202:0,201,0:0:0:201,0:7074,0:-635.149,-60.507,0,-635.149,-60.507,-635.149	1/2:53:0,33,20:0:0:33,20:1173,716:-153.753,-58.7471,-48.8131,-95.3621,0,-89.3415	1/2:79:0,37,42:0:0:37,42:1328,1481:-229.057,-120.939,-109.801,-108.473,0,-95.8302	1/2:192:0,99,92:0:0:99,92:3473,3274:-549.164,-266.826,-237.024,-282.39,0,-254.695	1/1:158:0,157,0:0:0:157,0:5525,0:-494.929,-47.2617,0,-494.929,-47.2617,-494.929	1/1:10:0,10,0:0:0:10,0:358,0:-32.5182,-3.0103,0,-32.5182,-3.0103,-32.5182	1/2:190:0,90,96:0:0:90,96:3162,3433:-536.973,-279.95,-252.857,-257.044,0,-228.145	1/2:118:0,75,43:0:0:75,43:2659,1540:-342.068,-125.949,-103.372,-216.475,0,-203.531	1/2:119:0,57,61:0:0:57,61:2021,2143:-338.897,-174.415,-157.256,-164.48,0,-146.117	1/2:6:0,2,4:0:0:2,4:72,144:-17.975,-12.1095,-11.5074,-6.22497,0,-5.02085	1/1:26:0,26,0:0:0:26,0:917,0:-82.5943,-7.82678,0,-82.5943,-7.82678,-82.5943	1/1:9:0,9,0:0:0:9,0:322,0:-29.253,-2.70927,0,-29.253,-2.70927,-29.253	1/2:15:0,10,5:0:0:10,5:339,180:-42.4558,-15.0469,-12.0366,-27.7615,0,-26.2564	1/2:16:0,8,8:0:0:8,8:286,288:-47.0748,-23.8592,-21.4509,-23.5735,0,-21.1652	1/2:132:0,63,69:0:0:63,69:2242,2467:-383.943,-201.512,-182.548,-182.787,0,-162.016	1/1:162:0,162,0:0:0:162,0:5709,0:-511.257,-48.7669,0,-511.257,-48.7669,-511.257	1/1:25:0,25,0:0:0:25,0:887,0:-79.019,-7.52575,0,-79.019,-7.52575,-79.019	1/1:4:0,4,0:0:0:4,0:136,0:-12.5595,-1.20412,0,-12.5595,-1.20412,-12.5595	1/1:104:0,103,0:0:0:103,0:3647,0:-325.818,-31.0061,0,-325.818,-31.0061,-325.818	1/1:30:0,28,0:0:0:28,0:967,0:-86.5915,-8.42884,0,-86.5915,-8.42884,-86.5915	1/1:156:0,155,0:0:0:155,0:5497,0:-493.097,-46.6597,0,-493.097,-46.6597,-493.097	1/1:21:0,21,0:0:0:21,0:752,0:-67.9319,-6.32163,0,-67.9319,-6.32163,-67.9319	1/2:27:0,9,18:0:0:9,18:317,648:-79.0195,-53.2333,-50.5241,-26.1407,0,-20.7221	1/2:96:0,52,44:0:0:52,44:1803,1580:-275.355,-129.246,-113.593,-146.461,0,-133.216	1/1:113:0,111,0:0:0:111,0:3938,0:-353.415,-33.4143,0,-353.415,-33.4143,-353.415	1/1:141:0,140,0:0:0:140,0:4942,0:-443.96,-42.1442,0,-443.96,-42.1442,-443.96	1/1:56:0,54,2:0:0:54,2:1868,72:-167.75,-16.2556,0,-161.875,-10.021,-161.273	1/2:118:0,63,54:0:0:63,54:2241,1925:-339.301,-156.91,-137.945,-182.387,0,-166.132	1/2:155:0,69,85:0:0:69,85:2461,3033:-447.801,-247.311,-226.54,-200.545,0,-174.958	1/2:8:0,6,2:0:0:6,2:205,72:-22.7525,-6.23466,-4.42848,-16.8726,0,-16.2706	1/2:78:0,44,33:0:0:44,33:1548,1172:-219.204,-95.4938,-82.2485,-123.702,0,-113.768	1/2:62:0,36,25:0:0:36,25:1271,900:-176.848,-73.4354,-62.5984,-103.409,0,-95.8837	1/2:33:0,18,15:0:0:18,15:648,521:-95.2354,-42.7009,-37.2823,-52.8865,0,-48.3711	1/2:158:0,81,77:0:0:81,77:2858,2741:-455.97,-223.752,-199.369,-232.572,0,-209.393	1/1:53:0,52,0:0:0:52,0:1860,0:-167.177,-15.65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chr12	24017186	.	ATCGACTTATA	GTCCACGTATA,ATCGACGTATA	148569	PASS	AB=0.526523,0.462532;ABP=24.7805,46.4574;AC=141,47;AF=0.75,0.25;AN=188;AO=5450,1663;CIGAR=1X2M1X2M1X4M,6M1X4M;DP=7231;DPB=7231.18;DPRA=0,1.04648;EPP=11630,3605.49;EPPR=7.35324;GTI=1;LEN=11,1;MEANALT=2.58511,2.81481;MQM=54.0393,59.979;MQMR=60;NS=94;NUMALT=2;ODDS=0.540547;PAIRED=0,0;PAIREDR=0;PAO=0.666667,0;PQA=24,0;PQR=0;PRO=0;QA=189000,59326;QR=71;RO=2;RPL=5426,1662;RPP=11630,3605.49;RPPR=7.35324;RPR=24,1;RUN=1,1;SAF=5450,1663;SAP=11837.5,3614.17;SAR=0,0;SRF=2;SRP=7.35324;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:57:0,55,0:0:0:55,0:1905,0:-170.556,-16.5567,0,-170.556,-16.5567,-170.556	1/2:122:0,55,64:0:0:55,64:1921,2283:-341.868,-186.176,-169.619,-155.753,0,-136.487	1/2:88:0,47,41:0:0:47,41:1615,1464:-250.54,-119.714,-105.565,-131.177,0,-118.834	1/2:141:0,87,53:0:0:87,53:3021,1908:-400.798,-155.683,-129.494,-245.11,0,-229.155	1/2:50:0,25,24:0:0:25,24:884,860:-141.737,-70.1374,-62.6116,-71.5952,0,-64.3705	1/2:17:0,7,10:0:0:7,10:242,352:-48.6102,-29.0079,-26.9007,-19.9499,0,-16.9396	1/1:105:0,103,0:0:0:103,0:3588,0:-322.409,-31.0061,0,-322.409,-31.0061,-322.409	1/2:124:0,65,53:0:0:65,53:2264,1908:-338.682,-155.764,-136.197,-182.991,0,-167.036	1/2:56:0,31,25:0:0:31,25:1082,892:-160.384,-73.0739,-63.742,-87.6623,0,-80.1366	1/1:96:0,96,0:0:0:96,0:3335,0:-300.062,-28.8989,0,-300.062,-28.8989,-300.062	1/2:35:0,21,14:0:0:21,14:719,504:-99.7334,-41.4837,-35.162,-58.6023,0,-54.3879	1/2:65:0,31,34:0:0:31,34:1076,1192:-184.557,-97.2961,-87.9642,-87.5587,0,-77.3237	1/2:47:0,24,23:0:0:24,23:838,820:-135.018,-67.1988,-59.9741,-68.1712,0,-61.2475	1/2:39:0,19,20:0:0:19,20:665,711:-112.308,-58.295,-52.5755,-54.3653,0,-48.3447	1/1:28:0,28,0:0:0:28,0:982,0:-88.5657,-8.42884,0,-88.5657,-8.42884,-88.5657	1/2:43:0,23,20:0:0:23,20:801,716:-123.728,-58.7471,-51.8234,-65.3336,0,-59.313	1/1:16:0,16,0:0:0:16,0:553,0:-49.994,-4.81648,0,-49.994,-4.81648,-49.994	1/1:18:0,17,0:0:0:17,0:593,0:-53.264,-5.11751,0,-53.264,-5.11751,-53.264	1/1:31:0,26,0:0:0:26,0:892,0:-79.9285,-7.82678,0,-79.9285,-7.82678,-79.9285	1/1:150:0,145,0:0:0:145,0:5028,0:-451.362,-43.6494,0,-451.362,-43.6494,-451.362	1/2:111:0,72,38:0:0:72,38:2506,1364:-314.499,-111.262,-89.5876,-203.233,0,-191.793	1/1:90:0,88,0:0:0:88,0:3027,0:-271.81,-26.4906,0,-271.81,-26.4906,-271.81	1/1:203:0,199,0:0:0:199,0:6880,0:-617.763,-59.905,0,-617.763,-59.905,-617.763	1/2:52:0,33,19:0:0:33,19:1137,680:-147.707,-55.8096,-45.8756,-92.2494,0,-86.5298	1/2:81:0,38,42:0:0:38,42:1314,1496:-228.586,-121.971,-110.532,-106.644,0,-94.0011	1/2:188:0,97,87:0:0:97,87:3350,3108:-525.284,-253.359,-224.159,-271.933,0,-245.744	1/1:158:0,154,0:0:0:154,0:5330,0:-478.138,-46.3586,0,-478.138,-46.3586,-478.138	1/1:10:0,10,0:0:0:10,0:352,0:-31.9787,-3.0103,0,-31.9787,-3.0103,-31.9787	1/2:190:0,91,98:0:0:91,98:3172,3503:-543.314,-285.638,-258.244,-257.688,0,-228.187	1/2:119:0,75,44:0:0:75,44:2616,1580:-341.534,-129.246,-106.669,-212.643,0,-199.397	1/2:116:0,59,57:0:0:59,57:2049,2044:-333.357,-167.073,-149.312,-166.637,0,-149.478	1/2:6:0,2,4:0:0:2,4:72,144:-17.975,-12.1095,-11.5074,-6.22497,0,-5.02085	1/1:26:0,25,0:0:0:25,0:871,0:-78.3104,-7.52575,0,-78.3104,-7.52575,-78.3104	1/1:9:0,9,0:0:0:9,0:310,0:-28.1783,-2.70927,0,-28.1783,-2.70927,-28.1783	1/2:15:0,10,5:0:0:10,5:346,176:-42.7289,-14.6799,-11.6696,-28.3987,0,-26.8935	1/2:16:0,8,8:0:0:8,8:278,288:-46.3768,-23.8592,-21.4509,-22.8707,0,-20.4624	1/2:132:0,63,69:0:0:63,69:2191,2450:-377.895,-199.981,-181.016,-178.265,0,-157.494	1/1:164:0,162,0:0:0:162,0:5586,0:-501.034,-48.7669,0,-501.034,-48.7669,-501.034	1/1:25:0,25,0:0:0:25,0:855,0:-76.8427,-7.52575,0,-76.8427,-7.52575,-76.8427	1/1:4:0,4,0:0:0:4,0:141,0:-13.0185,-1.20412,0,-13.0185,-1.20412,-13.0185	1/1:105:0,102,0:0:0:102,0:3531,0:-316.664,-30.7051,0,-316.664,-30.7051,-316.664	1/1:30:0,28,2:0:0:28,2:965,72:-86.4514,-8.42884,0,-80.5755,-2.19418,-79.9734	1/1:157:0,153,0:0:0:153,0:5295,0:-475.092,-46.0576,0,-475.092,-46.0576,-475.092	1/1:22:0,22,0:0:0:22,0:754,0:-68.1167,-6.62266,0,-68.1167,-6.62266,-68.1167	1/2:29:0,9,20:0:0:9,20:317,697:-82.8211,-57.0301,-54.3208,-26.1418,0,-20.1212	1/2:95:0,51,43:0:0:51,43:1765,1536:-268.388,-125.366,-110.013,-143.15,0,-130.206	1/1:113:0,113,0:0:0:113,0:3941,0:-354.067,-34.0164,0,-354.067,-34.0164,-354.067	1/1:142:0,138,0:0:0:138,0:4786,0:-429.906,-41.5421,0,-429.906,-41.5421,-429.906	1/1:56:0,54,2:0:0:54,2:1866,72:-167.594,-16.2556,0,-161.719,-10.021,-161.117	1/2:119:0,65,54:0:0:65,54:2254,1924:-340.229,-157.181,-137.614,-183.399,0,-167.144	1/2:156:0,69,85:0:0:69,85:2390,3027:-440.856,-246.733,-225.962,-194.133,0,-168.546	1/2:8:0,5,2:0:0:5,2:178,72:-20.3984,-5.96175,-4.4566,-14.5169,0,-13.9148	1/2:78:1,43,33:1:35:43,33:1477,1184:-212.239,-93.7818,-83.685,-115.956,0,-108.87	1/2:62:0,36,26:0:0:36,26:1253,928:-177.822,-76.0115,-65.1744,-102.163,0,-94.3365	1/2:32:0,18,14:0:0:18,14:624,504:-91.9182,-41.4837,-36.0651,-50.7878,0,-46.5734	1/2:156:0,80,74:0:0:80,74:2808,2643:-443.629,-215.534,-191.451,-228.142,0,-205.866	1/1:5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chr12	24017214	.	T	C	26444.6	PASS	AB=0.472167;ABP=26.5816;AC=47;AF=0.25;AN=188;AO=1668;CIGAR=1X;DP=7079;DPB=7079;DPRA=1.05936;EPP=3625.03;EPPR=11752.8;GTI=0;LEN=1;MEANALT=1;MQM=59.9388;MQMR=53.9856;NS=94;NUMALT=1;ODDS=0.861448;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58834;QR=192733;RO=5411;RPL=1668;RPP=3625.03;RPPR=11752.8;RPR=0;RUN=1;SAF=1668;SAP=3625.03;SAR=0;SRF=5411;SRP=11752.8;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:55:55,0:55:1946:0:0:0,-16.5566,-172.895	0/1:123:58,65:58:2056:65:2298:-170.054,0,-147.621	0/1:87:46,41:46:1631:41:1438:-103.522,0,-120.504	0/1:133:84,49:84:2988:49:1725:-115.495,0,-228.611	0/1:50:25,25:25:881:25:890:-65.3676,0,-64.2315	0/1:16:7,9:7:252:9:324:-24.6894,0,-18.1174	0/0:104:104,0:104:3707:0:0:0,-31.3071,-333.112	0/1:125:69,56:69:2463:56:1977:-140.562,0,-181.43	0/1:57:31,26:31:1108:26:908:-64.8738,0,-82.0824	0/0:95:95,0:95:3408:0:0:0,-28.5978,-306.53	0/1:35:21,14:21:747:14:491:-33.9851,0,-56.8846	0/1:67:31,36:31:1107:36:1253:-92.9021,0,-79.5194	0/1:46:23,23:23:828:23:816:-59.9143,0,-60.6206	0/1:39:19,20:19:684:20:698:-51.4013,0,-50.041	0/0:28:28,0:28:1000:0:0:0,-8.42884,-90.1647	0/1:41:23,18:23:820:18:632:-44.8645,0,-61.5436	0/0:16:16,0:16:567:0:0:0,-4.81648,-51.2367	0/0:18:18,0:18:644:0:0:0,-5.41854,-57.9655	0/0:31:31,0:31:1098:0:0:0,-9.33193,-97.7678	0/0:147:147,0:147:5230:0:0:0,-44.2514,-469.27	0/1:109:69,40:69:2465:40:1414:-94.7389,0,-188.606	0/0:89:89,0:89:3156:0:0:0,-26.7917,-283.907	0/0:195:195,0:195:6979:0:0:0,-58.7008,-626.892	0/1:51:32,19:32:1136:19:663:-44.6409,0,-86.6238	0/1:79:38,41:38:1340:41:1455:-107.464,0,-96.8104	0/1:187:95,92:95:3374:92:3242:-235.645,0,-247.359	0/0:154:154,0:154:5493:0:0:0,-46.3586,-492.448	0/0:10:10,0:10:356:0:0:0,-3.0103,-32.3376	0/1:187:88,99:88:3142:99:3491:-258.108,0,-226.372	0/1:115:73,42:73:2620:42:1485:-99.3251,0,-200.919	0/1:113:55,58:55:1950:58:2029:-148.863,0,-141.431	0/1:6:2,4:2:72:4:144:-11.5074,0,-5.02085	0/0:25:25,0:25:873:0:0:0,-7.52575,-78.641	0/0:9:9,0:9:309:0:0:0,-2.70927,-28.0745	0/1:14:9,5:9:316:5:176:-11.9706,0,-24.5001	0/1:15:7,8:7:248:8:288:-21.752,0,-18.0958	0/1:130:63,67:63:2256:67:2352:-172.805,0,-163.879	0/0:157:157,0:157:5592:0:0:0,-47.2617,-501.571	0/0:25:25,0:25:900:0:0:0,-7.52575,-80.185	0/0:4:4,0:4:140:0:0:0,-1.20412,-12.9271	0/0:101:101,0:101:3553:0:0:0,-30.404,-318.495	0/0:30:30,0:30:1076:0:0:0,-9.0309,-96.7511	0/0:153:153,0:153:5442:0:0:0,-46.0576,-487.986	0/0:22:22,0:22:784:0:0:0,-6.62266,-70.8028	0/1:29:9,20:9:324:20:689:-53.5984,0,-20.7547	0/1:93:49,44:49:1737:44:1553:-112.064,0,-128.426	0/0:111:111,0:111:3958:0:0:0,-33.4143,-355.476	0/0:141:141,0:141:5028:0:0:0,-42.4452,-451.083	0/0:53:51,2:51:1817:2:72:0,-9.11787,-156.453	0/1:119:66,53:66:2346:53:1891:-134.645,0,-175.334	0/1:155:70,85:70:2484:85:2989:-222.581,0,-177.001	0/1:8:6,2:6:216:2:72:-4.42848,0,-17.1975	0/1:76:43,33:43:1544:33:1172:-82.9092,0,-114.052	0/1:61:35,26:35:1248:26:912:-64.033,0,-94.1767	0/1:33:18,15:18:639:15:536:-38.6408,0,-47.5646	0/1:154:79,75:79:2800:75:2666:-193.826,0,-205.387	0/0:53:53,0:53:1895:0:0:0,-15.9546,-170.651	0/0:15:15,0:15:536:0:0:0,-4.51545,-48.488	0/0:10:10,0:10:360:0:0:0,-3.0103,-32.73	0/0:88:88,0:88:3164:0:0:0,-26.4906,-284.063	0/1:76:40,36:40:1432:36:1269:-91.6234,0,-106.164	0/0:24:24,0:24:864:0:0:0,-7.22472,-77.9933	0/0:134:134,0:134:4783:0:0:0,-40.338,-430.277	0/0:154:151,3:151:5372:3:108:0,-36.2834,-471.698	0/0:98:93,5:93:3274:5:166:0,-14.2344,-278.023	0/1:114:62,52:62:2205:52:1847:-132.192,0,-163.707	0/1:117:71,46:71:2525:46:1643:-112.937,0,-191.967	0/0:142:141,1:141:5014:1:36:0,-39.148,-447.317	0/0:17:17,0:17:608:0:0:0,-5.11751,-53.9486	0/0:49:49,0:49:1734:0:0:0,-14.7505,-155.497	0/1:44:20,24:20:716:24:819:-60.7755,0,-51.5023	0/1:29:17,12:17:604:12:420:-29.4042,0,-45.919	0/0:111:111,0:111:3923:0:0:0,-33.4143,-352.11	0/0:78:78,0:78:2784:0:0:0,-23.4803,-249.666	0/1:115:50,65:50:1784:65:2288:-171.557,0,-125.311	0/0:107:107,0:107:3808:0:0:0,-32.2102,-342.194	0/0:86:85,1:85:3026:1:36:0,-22.2903,-266.538	0/1:61:34,27:34:1220:27:951:-67.5407,0,-91.2219	0/1:25:20,5:20:711:5:176:-8.65927,0,-56.577	0/0:133:133,0:133:4761:0:0:0,-40.037,-427.051	0/1:115:72,43:72:2548:43:1527:-103.104,0,-193.646	0/0:170:170,0:170:6100:0:0:0,-51.1751,-546.983	0/0:45:45,0:45:1603:0:0:0,-13.5463,-144.275	0/1:37:23,14:23:824:14:504:-34.56,0,-63.1027	0/0:26:26,0:26:923:0:0:0,-7.82678,-83.2866	0/0:88:87,1:87:3103:1:36:0,-22.8924,-275.512	0/1:8:5,3:5:176:3:108:-7.66693,0,-13.4732	0/0:42:41,1:41:1464:1:32:0,-9.54053,-127.767	0/1:39:20,19:20:712:19:665:-48.4326,0,-52.0017	0/1:33:22,11:22:788:11:392:-25.6861,0,-61.1868	0/1:90:34,56:34:1220:56:1986:-151.92,0,-82.7923	0/1:47:16,31:16:576:31:1084:-83.7177,0,-37.7317	0/0:90:90,0:90:3184:0:0:0,-27.0927,-285.939	0/0:43:43,0:43:1531:0:0:0,-12.9443,-137.661
chr12	24180068	.	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chr12	24298790	.	C	T	61032.3	PASS	AB=0.498964;ABP=3.07777;AC=50;AF=0.265957;AN=188;AO=3632;CIGAR=1X;DP=13856;DPB=13856;DPRA=1.24082;EPP=7889.8;EPPR=22184.6;GTI=0;LEN=1;MEANALT=1.06667;MQM=59.9816;MQMR=59.9945;NS=94;NUMALT=1;ODDS=4.72413;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=129654;QR=363084;RO=10219;RPL=3632;RPP=7889.8;RPPR=22184.6;RPR=0;RUN=1;SAF=3632;SAP=7889.8;SAR=0;SRF=10219;SRP=22193.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:50:50,0:50:1779:0:0:0,-15.0515,-160.392	0/1:200:106,93:106:3760:93:3295:-236.631,0,-278.464	0/1:90:61,29:61:2149:29:1028:-65.7403,0,-166.583	0/1:402:168,234:168:5930:234:8340:-629.592,0,-412.796	0/1:132:51,81:51:1798:81:2892:-220.772,0,-122.365	0/1:159:62,97:62:2212:97:3472:-264.828,0,-151.481	0/0:185:185,0:185:6614:0:0:0,-55.6905,-595.339	0/1:364:179,185:179:6362:185:6571:-481.893,0,-463.1	0/1:141:51,90:51:1796:90:3210:-246.676,0,-119.474	0/0:169:168,1:168:6019:1:36:0,-47.2758,-538.215	0/1:62:34,28:34:1206:28:990:-70.7504,0,-90.1806	0/1:68:35,33:35:1227:33:1184:-86.3983,0,-90.263	0/1:77:27,50:27:940:50:1790:-138.203,0,-61.7315	0/1:98:57,41:57:2036:41:1464:-102.555,0,-154.011	0/0:66:66,0:66:2341:0:0:0,-19.868,-210.946	0/1:64:38,25:38:1355:25:900:-61.9963,0,-102.925	0/0:91:91,0:91:3225:0:0:0,-27.3937,-290.473	0/1:81:41,40:41:1453:40:1423:-103.983,0,-106.681	0/0:36:36,0:36:1275:0:0:0,-10.8371,-115.052	0/0:317:317,0:317:11272:0:0:0,-95.4265,-1014.37	0/1:264:141,123:141:5040:123:4384:-315.261,0,-374.275	0/0:218:218,0:218:7764:0:0:0,-65.6245,-698.792	0/0:100:99,1:99:3505:1:36:0,-26.5047,-312.063	0/1:157:78,79:78:2769:79:2802:-205.156,0,-202.189	0/1:145:88,57:88:3127:57:2048:-140.942,0,-238.005	0/1:612:304,307:304:10770:307:10992:-805.032,0,-785.073	0/0:306:305,1:305:10874:1:36:0,-88.5169,-974.965	0/0:37:37,0:37:1299:0:0:0,-11.1381,-117.21	0/1:306:186,120:186:6553:120:4302:-295.24,0,-497.741	0/1:375:184,191:184:6526:191:6842:-502.961,0,-474.541	0/1:159:80,79:80:2819:79:2835:-207.524,0,-206.085	0/1:13:6,7:6:207:7:252:-19.1156,0,-15.0535	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:7:7,0:7:243:0:0:0,-2.10721,-22.2075	0/1:5:3,2:3:108:2:72:-5.33157,0,-8.57002	0/1:5:3,2:3:104:2:72:-5.33157,0,-8.19766	0/1:202:116,86:116:4126:86:3088:-217.339,0,-310.718	0/0:292:291,1:291:10367:1:27:0,-85.201,-930.252	0/0:53:53,0:53:1876:0:0:0,-15.9546,-169.116	0/1:9:2,7:2:72:7:252:-20.3197,0,-4.12745	0/0:250:250,0:250:8830:0:0:0,-75.2575,-794.695	0/0:25:25,0:25:887:0:0:0,-7.52575,-80.1481	0/0:160:160,0:160:5697:0:0:0,-48.1648,-512.85	0/0:69:69,0:69:2448:0:0:0,-20.7711,-220.576	0/1:64:31,33:31:1104:33:1167:-86.0705,0,-80.4047	0/1:160:76,84:76:2713:84:3011:-223.055,0,-196.247	0/0:161:160,0:160:5672:0:0:0,-48.1648,-510.241	0/0:310:308,2:308:10959:2:72:0,-86.4826,-979.358	0/0:179:179,0:179:6370:0:0:0,-53.8844,-573.261	0/1:223:114,109:114:4042:109:3885:-282.714,0,-296.838	0/1:316:145,171:145:5151:171:6113:-455.144,0,-368.607	0/1:28:11,17:11:396:17:612:-46.9846,0,-27.5539	0/1:220:137,83:137:4907:83:2976:-201.846,0,-375.554	0/1:85:48,37:48:1713:37:1317:-93.2431,0,-128.866	0/1:26:9,17:9:320:17:608:-47.2252,0,-21.3156	0/1:170:118,52:118:4199:52:1859:-116.414,0,-326.918	0/0:48:48,0:48:1707:0:0:0,-14.4494,-153.915	0/1:20:13,7:13:468:7:252:-17.0084,0,-36.439	0/0:33:33,0:33:1179:0:0:0,-9.93399,-106.417	0/0:181:181,0:181:6403:0:0:0,-54.4864,-576.362	0/1:131:78,53:78:2760:53:1908:-132.563,0,-209.206	0/0:17:17,0:17:612:0:0:0,-5.11751,-55.4134	0/0:460:460,0:460:16344:0:0:0,-138.474,-1470.64	0/0:371:366,5:366:13038:5:180:0,-95.1301,-1156.68	0/0:139:134,4:134:4759:4:144:0,-28.5883,-415.155	0/1:101:57,44:57:2018:44:1544:-108.845,0,-151.488	0/1:231:124,107:124:4389:107:3790:-271.76,0,-325.646	0/0:156:154,2:154:5473:2:72:0,-40.124,-485.861	0/0:29:29,0:29:1014:0:0:0,-8.72987,-91.57	0/0:131:131,0:131:4648:0:0:0,-39.4349,-418.484	0/1:130:62,68:62:2192:68:2435:-180.271,0,-158.413	0/1:42:14,28:14:495:28:996:-77.3116,0,-32.2398	0/0:114:114,0:114:4057:0:0:0,-34.3174,-365.317	0/0:99:99,0:99:3518:0:0:0,-29.802,-316.831	0/1:289:143,146:143:5101:146:5174:-378.747,0,-372.236	0/0:296:296,0:296:10524:0:0:0,-89.1049,-947.081	0/0:199:198,1:198:7022:1:36:0,-56.3067,-628.449	0/1:216:97,119:97:3476:119:4251:-317.747,0,-248.029	0/1:13:8,5:8:284:5:180:-12.6387,0,-21.99	0/0:229:228,1:228:8068:1:36:0,-65.3376,-722.545	0/1:195:85,110:85:3027:110:3932:-295.372,0,-213.96	0/0:254:254,0:254:9049:0:0:0,-76.4616,-814.389	0/0:115:115,0:115:4080:0:0:0,-34.6184,-367.387	0/1:79:29,50:29:1040:50:1784:-137.061,0,-70.133	0/0:97:97,0:97:3458:0:0:0,-29.1999,-311.432	0/0:156:156,0:156:5551:0:0:0,-46.9607,-499.718	0/1:37:18,19:18:644:19:684:-50.7522,0,-47.1525	0/0:70:70,0:70:2467:0:0:0,-21.0721,-222.282	0/1:83:33,50:33:1180:50:1796:-136.937,0,-81.5226	0/1:33:14,19:14:500:19:671:-50.7818,0,-35.4022	0/1:83:35,48:35:1226:48:1706:-128.839,0,-85.6568	0/1:76:25,51:25:888:51:1828:-141.923,0,-57.3607	0/0:222:222,0:222:7926:0:0:0,-66.8287,-713.366	0/0:104:104,0:104:3693:0:0:0,-31.3071,-332.573
chr12	24578198	.	G	T	96231.7	PASS	AB=0.501541;ABP=3.18435;AC=49;AF=0.260638;AN=188;AO=4256;CIGAR=1X;DP=15848;DPB=15848;DPRA=1.24293;EPP=9244.8;EPPR=25157.3;GTI=0;LEN=1;MEANALT=1.04918;MQM=56.4767;MQMR=59.9611;NS=94;NUMALT=1;ODDS=4.96757;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=151416;QR=412229;RO=11588;RPL=1987;RPP=43.5846;RPPR=30.642;RPR=2269;RUN=1;SAF=1987;SAP=43.5846;SAR=2269;SRF=5987;SRP=30.9306;SRR=5601;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:71:69,2:69:2460:2:72:0,-14.5364,-214.817	0/0:216:216,0:216:7665:0:0:0,-65.0225,-689.886	0/1:222:135,87:135:4824:87:3094:-211.316,0,-367.485	0/1:265:150,115:150:5324:115:4062:-285.464,0,-399.438	0/1:115:55,60:55:1964:60:2099:-153.984,0,-142.417	0/1:90:46,44:46:1633:44:1572:-114.517,0,-120.164	0/0:232:232,0:232:8263:0:0:0,-69.839,-743.668	0/1:270:139,131:139:4944:131:4646:-335.747,0,-363.832	0/1:181:92,89:92:3270:89:3172:-230.693,0,-239.904	0/0:118:118,0:118:4232:0:0:0,-35.5215,-381.058	0/1:195:92,102:92:3280:102:3636:-268.547,0,-236.77	0/1:192:80,112:80:2835:112:3989:-299.092,0,-197.589	0/1:247:126,121:126:4437:121:4323:-312.883,0,-325.15	0/1:306:156,149:156:5545:149:5292:-383.121,0,-407.018	0/0:178:178,0:178:6340:0:0:0,-53.5833,-570.693	0/1:191:91,100:91:3233:100:3548:-261.039,0,-233.695	0/0:267:267,0:267:9513:0:0:0,-80.375,-856.087	0/1:229:97,132:97:3440:132:4707:-353.012,0,-240.876	0/0:201:201,0:201:7145:0:0:0,-60.507,-643.099	0/0:226:226,0:226:8078:0:0:0,-68.0328,-727.033	0/1:213:101,112:101:3601:112:3976:-293.335,0,-260.176	0/0:56:56,0:56:1996:0:0:0,-16.8577,-179.914	0/0:92:92,0:92:3291:0:0:0,-27.6948,-296.409	0/1:141:69,72:69:2440:72:2584:-189.874,0,-177.408	0/1:83:32,51:32:1139:51:1820:-139.022,0,-77.8329	0/1:300:144,156:144:5155:156:5579:-411.726,0,-373.781	0/0:303:302,1:302:10765:1:36:0,-87.6138,-965.159	0/0:97:97,0:97:3456:0:0:0,-29.1999,-311.251	0/1:383:219,164:219:7757:164:5812:-407.028,0,-582.872	0/1:150:71,79:71:2544:79:2819:-208.49,0,-184.052	0/1:169:100,69:100:3577:69:2439:-168.335,0,-271.192	0/1:9:7,2:7:252:2:72:-4.11776,0,-20.3197	0/0:23:23,0:23:806:0:0:0,-6.92369,-72.8582	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/1:20:8,12:8:288:12:432:-32.9681,0,-20.2468	0/1:21:13,8:13:468:8:288:-19.8962,0,-36.138	0/1:444:228,216:228:8087:216:7715:-558.613,0,-593.176	0/0:178:178,0:178:6326:0:0:0,-53.5833,-569.433	0/0:205:205,0:205:7285:0:0:0,-61.7111,-655.707	0/1:4:2,2:2:68:2:72:-5.6326,0,-5.25359	0/0:229:228,1:228:8099:1:36:0,-65.3376,-725.296	0/0:125:125,0:125:4421:0:0:0,-37.6287,-398.066	0/0:212:211,1:211:7465:1:27:0,-61.1186,-669.197	0/0:167:167,0:167:5932:0:0:0,-50.272,-533.991	0/1:143:64,79:64:2266:79:2797:-207.718,0,-161.151	0/1:83:41,42:41:1459:42:1488:-109.209,0,-106.62	0/0:173:172,0:172:6149:0:0:0,-51.7772,-553.168	0/0:197:196,1:196:6972:1:36:0,-55.7046,-623.946	0/0:145:145,0:145:5140:0:0:0,-43.6493,-462.742	0/1:216:91,125:91:3255:125:4459:-335.44,0,-228.148	0/1:196:103,93:103:3679:93:3326:-240.51,0,-272.311	0/1:13:3,10:3:108:10:356:-28.4598,0,-6.16178	0/1:251:126,125:126:4454:125:4480:-327.275,0,-325.471	0/1:71:34,37:34:1211:37:1324:-97.9896,0,-87.9224	0/1:19:12,7:12:417:7:252:-17.2846,0,-32.1406	0/1:192:106,86:106:3772:86:3059:-216.81,0,-281.881	0/0:48:48,0:48:1712:0:0:0,-14.4494,-153.737	0/1:14:11,3:11:396:3:99:-5.02016,0,-31.7683	0/0:23:23,0:23:806:0:0:0,-6.92369,-72.8582	0/0:110:110,0:110:3910:0:0:0,-33.1133,-352.091	0/1:330:153,177:153:5444:177:6311:-466.557,0,-390.75	0/0:6:6,0:6:216:0:0:0,-1.80618,-19.7905	0/0:133:133,0:133:4744:0:0:0,-40.037,-427.109	0/0:316:314,2:314:11148:2:72:0,-88.2912,-996.373	0/0:143:136,7:136:4835:7:252:0,-20.0277,-412.285	0/1:102:57,45:57:2031:45:1596:-112.806,0,-152.357	0/1:163:77,86:77:2755:86:3032:-223.595,0,-199.123	0/0:120:120,0:120:4274:0:0:0,-36.1236,-384.839	0/0:126:126,0:126:4474:0:0:0,-37.9298,-402.822	0/0:161:161,0:161:5760:0:0:0,-48.4658,-518.472	0/1:298:145,153:145:5077:153:5459:-400.681,0,-367.346	0/1:29:12,17:12:428:17:612:-46.4387,0,-30.1289	0/0:116:116,0:116:4148:0:0:0,-34.9195,-372.876	0/0:141:141,0:141:5008:0:0:0,-42.4452,-450.866	0/1:281:144,136:144:5132:136:4798:-346.704,0,-376.716	0/0:265:263,2:263:9401:2:72:0,-72.9362,-839.216	0/0:201:201,0:201:7139:0:0:0,-60.507,-642.569	0/1:213:112,101:112:3972:101:3567:-255.446,0,-293.548	0/1:20:14,6:14:500:6:216:-13.7367,0,-39.3156	0/0:180:176,4:176:6270:4:144:0,-40.8765,-551.085	0/1:178:83,95:83:2963:95:3379:-249.615,0,-213.318	0/0:314:313,1:313:11170:1:32:0,-91.3251,-1001.99	0/0:224:224,0:224:7920:0:0:0,-67.4307,-712.826	0/1:228:129,99:129:4550:99:3517:-247.824,0,-341.035	0/0:229:229,0:229:8165:0:0:0,-68.9359,-734.867	0/0:288:285,3:285:10210:3:108:0,-76.6311,-908.757	0/1:98:41,57:41:1434:57:2036:-153.184,0,-99.8508	0/0:194:194,0:194:6886:0:0:0,-58.3998,-619.812	0/1:172:79,93:79:2824:93:3298:-244.477,0,-202.622	0/1:238:114,124:114:4088:124:4397:-323.085,0,-296.46	0/1:297:153,144:153:5418:144:5135:-371.865,0,-398.347	0/1:149:44,105:44:1553:105:3752:-292.908,0,-95.2063	0/0:90:89,1:89:3163:1:36:0,-23.497,-281.297	0/0:266:266,0:266:9456:0:0:0,-80.074,-851.002
chr12	24578201	.	CCC	TCT,CCT	431958	PASS	AB=0.501639,0.49368;ABP=3.20955,5.97473;AC=139,49;AF=0.739362,0.260638;AN=188;AO=11820,4251;CIGAR=1X1M1X,2M1X;DP=16137;DPB=16137.7;DPRA=0,1.27706;EPP=25661.1,9225.26;EPPR=5.18177;GTI=0;LEN=3,1;MEANALT=2.30851,2.61538;MQM=59.9483,56.5712;MQMR=60;NS=94;NUMALT=2;ODDS=6.8851;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=72,0;PQR=0;PRO=0;QA=413411,151253;QR=36;RO=1;RPL=6119,1998;RPP=35.1091,36.226;RPPR=5.18177;RPR=5701,2253;RUN=1,1;SAF=6120,1997;SAP=35.417,36.7491;SAR=5700,2254;SRF=0;SRP=5.18177;SRR=1;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:71:0,69,2:0:0:69,2:2416,63:-217.364,-20.7711,0,-212.299,-15.7348,-211.697	1/1:228:0,227,0:0:0:227,0:7916,0:-712.116,-68.3338,0,-712.116,-68.3338,-712.116	1/2:228:0,137,90:0:0:137,90:4829,3196:-653.291,-260.115,-218.874,-393.31,0,-366.217	1/2:268:0,156,112:0:0:156,112:5442,3993:-767.896,-325.376,-278.416,-442.872,0,-409.157	1/2:116:0,57,57:0:0:57,57:2007,1988:-324.634,-161.239,-144.08,-163.405,0,-146.246	1/2:90:0,46,44:0:0:46,44:1603,1571:-258.621,-128.264,-114.416,-130.71,0,-117.464	1/1:235:0,235,0:0:0:235,0:8184,0:-736.485,-70.7421,0,-736.485,-70.7421,-736.485	1/2:271:0,140,127:0:0:140,127:4885,4544:-766.823,-369.508,-327.364,-397.344,0,-359.113	1/2:183:0,92,89:0:0:92,89:3243,3121:-517.797,-253.748,-226.053,-264.152,0,-237.361	1/1:119:0,119,0:0:0:119,0:4222,0:-380.163,-35.8226,0,-380.163,-35.8226,-380.163	1/2:197:0,93,102:0:0:93,102:3244,3640:-560.33,-296.493,-268.497,-263.83,0,-233.125	1/2:196:0,83,113:0:0:83,113:2909,3981:-559.017,-322.307,-297.322,-237.06,0,-203.043	1/2:249:0,124,124:0:0:124,124:4323,4437:-711.034,-359.465,-322.137,-351.561,0,-314.234	1/2:310:0,161,149:0:0:161,149:5639,5324:-891.719,-432.897,-384.431,-459.175,0,-414.322	1/1:182:0,181,1:0:0:181,1:6385,36:-574.388,-54.4864,0,-571.45,-51.1892,-571.149	1/2:198:0,95,103:0:0:95,103:3340,3654:-568.825,-296.963,-268.365,-272.215,0,-241.209	1/1:277:0,276,0:0:0:276,0:9678,0:-870.548,-83.0843,0,-870.548,-83.0843,-870.548	1/2:233:0,99,130:0:0:99,130:3466,4651:-659.991,-377.989,-348.187,-282.038,0,-242.904	1/1:206:0,203,2:0:0:203,2:7122,72:-640.702,-61.1091,0,-634.827,-55.181,-634.225	1/1:228:0,227,0:0:0:227,0:7945,0:-714.829,-68.3338,0,-714.829,-68.3338,-714.829	1/2:217:0,106,111:0:0:106,111:3712,3958:-624.621,-322.599,-290.689,-302.375,0,-268.961	1/1:56:0,56,0:0:0:56,0:1954,0:-176.134,-16.8577,0,-176.134,-16.8577,-176.134	1/1:94:0,93,0:0:0:93,0:3249,0:-292.272,-27.9958,0,-292.272,-27.9958,-292.272	1/2:143:0,70,71:0:0:70,71:2466,2514:-405.175,-204.405,-183.333,-200.84,0,-179.467	1/2:79:0,33,46:0:0:33,46:1127,1644:-225.724,-134.276,-124.342,-91.796,0,-77.9486	1/2:310:0,153,157:0:0:153,157:5314,5617:-890.171,-458.177,-412.12,-432.346,0,-385.084	1/1:312:0,309,2:0:0:309,2:10835,72:-974.709,-93.0183,0,-968.834,-87.1434,-968.232	1/1:99:0,99,0:0:0:99,0:3502,0:-315.393,-29.802,0,-315.393,-29.802,-315.393	1/2:384:0,219,164:0:0:219,164:7662,5794:-1094.69,-471.345,-405.42,-623.412,0,-574.043	1/2:154:0,72,82:0:0:72,82:2488,2911:-439.398,-237.251,-215.577,-202.496,0,-177.812	1/2:172:0,101,70:0:0:101,70:3525,2508:-490.639,-203.939,-173.535,-286.694,0,-265.622	1/2:9:0,7,2:0:0:7,2:243,72:-25.9687,-6.22497,-4.11776,-20.1003,0,-19.4982	1/1:23:0,23,0:0:0:23,0:813,0:-73.4905,-6.92369,0,-73.4905,-6.92369,-73.4905	1/1:10:0,10,0:0:0:10,0:354,0:-32.2,-3.0103,0,-32.2,-3.0103,-32.2	1/2:20:0,8,12:0:0:8,12:278,432:-57.9735,-35.3764,-32.9681,-22.9486,0,-19.3362	1/2:20:0,13,7:0:0:13,7:450,248:-57.0771,-20.5123,-16.5989,-36.9156,0,-34.8084	1/2:456:0,234,220:0:0:234,220:8209,7844:-1305.45,-637.786,-567.345,-667.769,0,-601.542	1/1:176:0,175,0:0:0:175,0:6147,0:-552.977,-52.6803,0,-552.977,-52.6803,-552.977	1/1:210:0,208,0:0:0:208,0:7251,0:-652.409,-62.6142,0,-652.409,-62.6142,-652.409	1/2:5:0,3,2:0:0:3,2:100,72:-14.3123,-6.23466,-5.33157,-8.42677,0,-7.82471	1/1:235:0,233,1:0:0:233,1:8099,36:-728.61,-70.14,0,-725.673,-67.1893,-725.372	1/1:126:0,126,0:0:0:126,0:4402,0:-396.359,-37.9298,0,-396.359,-37.9298,-396.359	1/1:222:0,220,1:0:0:220,1:7673,36:-690.263,-66.2266,0,-687.326,-63.2892,-687.025	1/1:172:0,171,0:0:0:171,0:5978,0:-537.776,-51.4761,0,-537.776,-51.4761,-537.776	1/2:142:0,65,77:0:0:65,77:2244,2687:-400.54,-218.233,-198.666,-182.653,0,-159.473	1/2:91:0,46,45:0:0:46,45:1628,1593:-262.643,-130.038,-116.191,-132.959,0,-119.412	1/1:178:0,177,1:0:0:177,1:6196,36:-557.389,-53.2823,0,-554.451,-49.9851,-554.15	1/1:203:0,202,1:0:0:202,1:7029,36:-632.298,-60.8081,0,-629.36,-57.5108,-629.059	1/1:151:0,148,0:0:0:148,0:5169,0:-465.024,-44.5524,0,-465.024,-44.5524,-465.024	1/2:215:0,93,121:0:0:93,121:3285,4348:-621.24,-353.72,-325.724,-267.526,0,-231.101	1/2:201:0,104,97:0:0:104,97:3626,3464:-577.614,-282.726,-251.419,-295.241,0,-266.041	1/2:14:0,4,10:0:0:4,10:133,351:-39.6628,-28.9069,-27.7028,-11.0935,0,-8.08317	1/2:248:1,126,121:1:36:126,121:4371,4311:-702.926,-347.938,-312.946,-352.343,0,-318.856	1/2:70:0,33,35:0:0:33,35:1161,1248:-196.225,-101.717,-91.7832,-94.5019,0,-83.9659	1/2:21:0,13,8:0:0:13,8:461,288:-61.3896,-23.8344,-19.921,-37.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chr12	24667325	.	A	G	118034	PASS	AB=0.517165;ABP=18.0689;AC=57;AF=0.303191;AN=188;AO=6024;CIGAR=1X;DP=14477;DPB=14477;DPRA=1.60185;EPP=13084;EPPR=18343.3;GTI=6;LEN=1;MEANALT=1.08621;MQM=59.9927;MQMR=59.9871;NS=94;NUMALT=1;ODDS=2.57505;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=215583;QR=301824;RO=8446;RPL=0;RPP=13084;RPPR=18343.3;RPR=6024;RUN=1;SAF=6024;SAP=13084;SAR=0;SRF=8446;SRP=18343.3;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:44:44,0:44:1572:0:0:0,-13.2453,-141.772	0/0:146:146,0:146:5218:0:0:0,-43.9504,-469.755	0/1:108:61,47:61:2188:47:1684:-119.336,0,-164.674	0/1:116:90,26:90:3221:26:928:-48.9188,0,-255.191	0/1:58:39,19:39:1389:19:684:-44.4306,0,-107.847	0/1:72:47,25:47:1677:25:896:-59.2862,0,-129.541	0/0:126:126,0:126:4520:0:0:0,-37.9298,-406.967	0/1:165:117,48:117:4189:48:1724:-105.775,0,-327.52	0/1:102:71,31:71:2529:31:1101:-68.6933,0,-197.155	0/0:129:129,0:129:4568:0:0:0,-38.8329,-411.283	0/1:402:59,343:59:2100:343:12269:-983.037,0,-68.2557	0/1:104:64,40:64:2300:40:1436:-98.2305,0,-175.954	0/1:88:57,31:57:2033:31:1107:-73.4495,0,-156.75	0/1:141:87,54:87:3116:54:1940:-132.431,0,-238.221	0/0:125:124,0:124:4448:0:0:0,-37.3277,-400.17	0/1:91:50,41:50:1761:41:1476:-105.742,0,-131.375	0/0:112:111,1:111:3975:1:36:0,-30.1171,-354.341	0/1:86:38,48:38:1364:48:1724:-129.557,0,-97.1721	0/0:74:74,0:74:2656:0:0:0,-22.2762,-239.286	0/0:152:152,0:152:5430:0:0:0,-45.7566,-488.827	0/1:127:99,28:99:3525:28:1004:-52.4451,0,-279.228	0/0:116:116,0:116:4157:0:0:0,-34.9195,-374.311	0/0:97:97,0:97:3472:0:0:0,-29.1999,-312.691	0/1:108:66,42:66:2372:42:1500:-102.783,0,-181.226	0/0:63:63,0:63:2245:0:0:0,-18.9649,-202.312	0/1:252:156,96:156:5577:96:3440:-233.953,0,-426.193	0/0:350:349,1:349:12494:1:36:0,-101.762,-1120.69	0/0:56:56,0:56:2012:0:0:0,-16.8577,-181.353	0/1:199:115,84:115:4102:84:2978:-208.346,0,-309.458	0/1:201:134,67:134:4793:67:2408:-156.469,0,-371.018	0/1:90:63,27:63:2268:27:942:-57.9971,0,-177.288	1/1:298:9,289:9:324:289:10364:-903.173,-60.2011,0	0/0:18:17,1:17:612:1:36:0,-1.82026,-51.8152	0/0:14:14,0:14:492:0:0:0,-4.21442,-44.6123	1/1:888:6,880:6:216:880:31420:-2807.05,-247.259,0	1/1:287:9,278:9:324:278:9957:-866.556,-56.8898,0	0/1:280:159,121:159:5685:121:4347:-307.114,0,-427.479	0/0:178:178,0:178:6373:0:0:0,-53.5833,-573.658	0/0:127:127,0:127:4512:0:0:0,-38.2308,-406.249	1/1:184:6,178:6:216:178:6377:-554.226,-35.599,0	0/0:137:137,0:137:4901:0:0:0,-41.2411,-441.238	0/0:47:47,0:47:1672:0:0:0,-14.1484,-150.767	0/0:143:143,0:143:5116:0:0:0,-43.0473,-460.583	0/0:144:144,0:144:5133:0:0:0,-43.3483,-462.113	0/1:89:49,40:49:1756:40:1417:-101.034,0,-131.532	0/1:95:64,31:64:2285:31:1116:-72.1538,0,-177.312	0/0:101:101,0:101:3624:0:0:0,-30.404,-326.365	0/0:248:248,0:248:8817:0:0:0,-74.6554,-793.246	0/0:85:85,0:85:3033:0:0:0,-25.5875,-273.199	0/1:100:65,35:65:2332:35:1260:-83.6025,0,-180.037	0/1:120:75,44:75:2688:44:1580:-106.309,0,-205.982	1/1:232:8,224:8:288:224:7995:-693.302,-43.5716,0	0/1:114:87,27:87:3128:27:968:-53.1199,0,-247.428	0/1:33:18,15:18:640:15:540:-39.0025,0,-47.9953	1/1:468:18,449:18:648:449:16093:-1389.39,-82.289,0	0/1:79:58,21:58:2080:21:752:-44.2249,0,-163.689	0/0:51:51,0:51:1832:0:0:0,-15.3525,-165.161	1/1:106:10,96:10:345:96:3440:-278.432,-0.528358,0	0/0:37:37,0:37:1328:0:0:0,-11.1381,-119.822	0/0:76:76,0:76:2732:0:0:0,-22.8783,-246.122	0/1:168:99,69:99:3560:69:2476:-172.52,0,-270.034	0/0:16:16,0:16:576:0:0:0,-4.81648,-52.175	0/0:211:210,0:210:7498:0:0:0,-63.2163,-673.669	0/0:257:256,1:256:9104:1:36:0,-73.7664,-815.735	0/0:90:88,2:88:3160:2:68:0,-20.635,-278.166	0/1:57:37,20:37:1302:20:705:-46.6141,0,-100.319	0/1:168:89,79:89:3185:79:2825:-203.914,0,-236.299	0/0:131:129,2:129:4617:2:68:0,-32.9772,-409.234	0/0:46:46,0:46:1637:0:0:0,-13.8474,-147.617	0/0:97:96,1:96:3403:1:36:0,-25.6016,-302.883	0/1:103:73,30:73:2620:30:1080:-66.5072,0,-205.041	1/1:250:15,235:15:521:235:8416:-710.221,-28.0412,0	0/0:126:126,0:126:4498:0:0:0,-37.9298,-404.986	0/0:69:69,0:69:2442:0:0:0,-20.7711,-220.032	0/1:175:101,74:101:3628:74:2644:-185.397,0,-274.044	0/0:157:156,1:156:5551:1:36:0,-43.6634,-496.114	0/0:118:118,0:118:4209:0:0:0,-35.5215,-378.99	0/1:130:85,45:85:3033:45:1612:-106.236,0,-234.065	1/1:352:12,340:12:432:340:12145:-1053.67,-66.7414,0	0/0:111:110,1:110:3903:1:36:0,-29.8161,-347.863	0/1:87:65,22:65:2324:22:784:-44.6943,0,-183.231	0/0:199:199,0:199:7129:0:0:0,-59.905,-641.637	0/0:162:161,1:161:5746:1:36:0,-45.1686,-513.656	0/1:70:37,33:37:1328:33:1180:-85.435,0,-98.7501	0/0:143:143,0:143:5117:0:0:0,-43.0473,-460.671	0/0:259:259,0:259:9251:0:0:0,-77.9668,-832.528	0/1:51:20,31:20:712:31:1116:-85.3992,0,-49.0541	0/0:112:112,0:112:4024:0:0:0,-33.7154,-362.347	0/1:100:70,30:70:2508:30:1071:-66.5986,0,-195.869	0/1:436:42,394:42:1508:394:14090:-1136.62,0,-4.76552	0/1:816:95,720:95:3408:720:25808:-2076.29,0,-61.2346	0/1:103:38,65:38:1364:65:2340:-179.853,0,-92.0546	0/0:61:61,0:61:2184:0:0:0,-18.3628,-196.826	0/0:167:167,0:167:5939:0:0:0,-50.272,-534.617
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chr12	24846340	.	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chr12	24960068	.	A	G	88012.8	PASS	AB=0.47748;ABP=39.2958;AC=47;AF=0.25;AN=188;AO=3960;CIGAR=1X;DP=17042;DPB=17042;DPRA=1.17522;EPP=8602.04;EPPR=28405.9;GTI=0;LEN=1;MEANALT=1.01639;MQM=59.5879;MQMR=59.5746;NS=94;NUMALT=1;ODDS=2.01002;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=140456;QR=465318;RO=13080;RPL=1813;RPP=64.1822;RPPR=32.5749;RPR=2147;RUN=1;SAF=1813;SAP=64.1822;SAR=2147;SRF=6329;SRP=32.5749;SRR=6751;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:97:97,0:97:3460:0:0:0,-29.1999,-311.598	0/0:190:190,0:190:6784:0:0:0,-57.1957,-610.306	0/1:288:163,125:163:5789:125:4407:-309.776,0,-433.934	0/1:451:236,215:236:8322:215:7682:-555.617,0,-612.7	0/1:90:63,27:63:2234:27:949:-58.6301,0,-174.229	0/1:58:32,26:32:1152:26:893:-63.0413,0,-86.5186	0/0:171:171,0:171:6096:0:0:0,-51.4761,-548.655	0/1:254:113,141:113:4024:141:5001:-373.394,0,-285.621	0/1:166:91,75:91:3252:75:2665:-190.026,0,-242.776	0/0:138:137,1:137:4892:1:36:0,-37.9753,-436.34	0/1:125:54,71:54:1919:71:2544:-191.582,0,-135.358	0/1:187:86,101:86:3054:101:3576:-265.622,0,-218.693	0/1:142:77,65:77:2746:65:2317:-166.032,0,-204.606	0/1:160:101,59:101:3590:59:2089:-140.113,0,-275.006	0/0:158:158,0:158:5684:0:0:0,-47.5627,-511.641	0/1:149:60,89:60:2144:89:3149:-238.775,0,-148.363	0/0:122:122,0:122:4336:0:0:0,-36.7257,-390.129	0/1:122:57,65:57:2013:65:2324:-172.569,0,-144.511	0/0:74:74,0:74:2625:0:0:0,-22.2762,-236.462	0/0:326:326,0:326:11588:0:0:0,-98.1358,-1042.62	0/1:254:150,104:150:5330:104:3706:-257.275,0,-403.171	0/0:193:193,0:193:6875:0:0:0,-58.0988,-618.758	0/0:207:207,0:207:7385:0:0:0,-62.3132,-664.255	0/1:204:130,74:130:4625:74:2624:-174.946,0,-354.707	0/0:187:186,1:186:6623:1:36:0,-52.6943,-592.416	0/1:494:293,201:293:10474:201:7100:-490.28,0,-793.771	0/0:537:536,1:536:19063:1:36:0,-158.055,-1710.88	0/0:68:68,0:68:2423:0:0:0,-20.47,-218.317	0/1:425:183,242:183:6505:242:8553:-641.801,0,-457.581	0/1:212:113,99:113:4002:99:3506:-251.151,0,-296.54	0/1:229:92,137:92:3291:137:4859:-368.371,0,-227.388	0/1:16:10,6:10:335:6:216:-14.9284,0,-25.6566	0/0:41:41,0:41:1455:0:0:0,-12.3422,-131.245	0/0:7:7,0:7:248:0:0:0,-2.10721,-22.6634	0/1:18:5,13:5:176:13:464:-36.6786,0,-10.7655	0/1:32:27,5:27:960:5:176:-6.55067,0,-77.0795	0/1:454:200,254:200:7142:254:9070:-679.555,0,-506.151	0/0:230:229,0:229:8146:0:0:0,-68.9359,-732.802	0/0:126:126,0:126:4488:0:0:0,-37.9298,-403.904	0/1:7:4,3:4:144:3:99:-7.12937,0,-11.2064	0/0:254:254,0:254:9023:0:0:0,-76.4616,-811.412	0/0:90:90,0:90:3205:0:0:0,-27.0927,-288.653	0/0:261:261,0:261:9232:0:0:0,-78.5688,-830.695	0/0:177:177,0:177:6324:0:0:0,-53.2823,-568.959	0/0:124:124,0:124:4412:0:0:0,-37.3277,-396.878	0/1:165:111,54:111:3955:54:1932:-124.469,0,-306.455	0/0:272:271,1:271:9627:1:36:0,-78.2823,-862.528	0/1:192:107,85:107:3822:85:2980:-210.605,0,-286.305	0/0:182:182,0:182:6502:0:0:0,-54.7875,-585.235	0/1:318:198,120:198:7017:120:4264:-288.181,0,-535.479	0/0:248:248,0:248:8826:0:0:0,-74.6554,-794.321	0/1:16:8,8:8:284:8:284:-21.0869,0,-21.0869	0/1:223:127,96:127:4523:96:3417:-240.425,0,-340.087	0/1:89:41,48:41:1427:48:1698:-126.283,0,-101.93	0/1:23:13,10:13:459:10:356:-25.4559,0,-34.6316	0/1:259:146,112:146:5140:112:3925:-275.47,0,-384.859	0/0:124:124,0:124:4364:0:0:0,-37.3277,-392.88	0/1:37:25,12:25:881:12:423:-27.2668,0,-68.4678	0/0:31:31,0:31:1108:0:0:0,-9.33193,-100.031	0/0:212:212,0:212:7514:0:0:0,-63.8184,-675.791	0/1:185:101,84:101:3602:84:3001:-214.629,0,-268.645	0/0:20:20,0:20:711:0:0:0,-6.0206,-64.3156	0/0:266:266,0:266:9450:0:0:0,-80.074,-850.077	0/0:367:364,3:364:12905:3:108:0,-100.403,-1151.02	0/0:118:110,8:110:3913:8:288:0,-9.25413,-326.032	0/1:167:91,76:91:3215:76:2692:-192.224,0,-239.263	0/1:327:178,149:178:6377:149:5269:-375.781,0,-475.53	0/0:294:290,4:290:10271:4:144:0,-75.1892,-910.905	0/0:94:93,1:93:3313:1:36:0,-24.7483,-294.238	0/0:106:106,0:106:3772:0:0:0,-31.9092,-339.564	0/1:160:83,77:83:2946:77:2743:-198.929,0,-217.157	0/1:28:17,11:17:599:11:377:-25.8272,0,-45.7808	0/0:209:209,0:209:7421:0:0:0,-62.9153,-667.799	0/0:156:156,0:156:5521:0:0:0,-46.9607,-496.987	0/1:294:180,114:180:6402:114:4036:-274.751,0,-486.938	0/0:338:338,0:338:12017:0:0:0,-101.748,-1081.07	0/0:168:167,1:167:5971:1:36:0,-46.9752,-533.143	0/1:241:72,169:72:2567:169:5995:-466.919,0,-158.717	0/1:23:15,8:15:516:8:288:-19.2549,0,-39.8364	0/0:215:214,1:214:7613:1:36:0,-61.1232,-681.508	0/1:181:90,91:90:3208:91:3200:-232.95,0,-234.267	0/0:318:316,2:316:11299:2:72:0,-88.8908,-1009.52	0/0:165:165,0:165:5876:0:0:0,-49.6699,-528.883	0/1:138:66,72:66:2350:72:2552:-188.33,0,-170.086	0/0:187:187,0:187:6703:0:0:0,-56.2926,-603.278	0/0:308:307,1:307:10970:1:36:0,-89.119,-982.585	0/1:64:31,33:31:1103:33:1188:-87.953,0,-80.3062	0/0:153:152,1:152:5408:1:36:0,-42.4593,-483.168	0/1:137:66,71:66:2355:71:2536:-187.152,0,-170.757	0/1:87:41,46:41:1468:46:1635:-121.225,0,-106.057	0/1:198:101,97:101:3599:97:3404:-246.908,0,-264.495	0/1:148:55,93:55:1967:93:3320:-253.886,0,-132.695	0/0:264:263,1:263:9379:1:36:0,-75.8736,-840.155	0/0:212:212,0:212:7492:0:0:0,-63.8184,-674.116
chr12	24960113	.	C	T	151276	PASS	AB=0.514801;ABP=11.5594;AC=142;AF=0.755319;AN=188;AO=7143;CIGAR=1X;DP=9332;DPB=9332;DPRA=0;EPP=15513.8;EPPR=4752.02;GTI=1;LEN=1;MEANALT=1.02128;MQM=59.75;MQMR=59.9451;NS=94;NUMALT=1;ODDS=1.39714;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=255676;QR=77840;RO=2187;RPL=7143;RPP=15513.8;RPPR=4752.02;RPR=0;RUN=1;SAF=0;SAP=15513.8;SAR=7143;SRF=0;SRP=4752.02;SRR=2187;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:82:0,82:0:0:82:2922:-262.838,-24.6845,0	1/1:61:0,61:0:0:61:2192:-197.281,-18.3628,0	0/1:219:82,137:82:2918:137:4897:-374.92,0,-196.926	0/1:256:126,130:126:4509:130:4638:-340.517,0,-328.913	0/1:60:16,44:16:576:44:1569:-123.437,0,-34.1132	0/1:19:14,5:14:489:5:180:-10.8316,0,-38.6193	1/1:69:0,69:0:0:69:2480:-223.447,-20.7711,0	0/1:137:83,54:83:2927:54:1917:-131.386,0,-222.413	0/1:87:42,45:42:1500:45:1605:-118.534,0,-109.105	1/1:86:0,86:0:0:86:3050:-274.707,-25.8886,0	0/1:70:39,31:39:1389:31:1116:-79.6796,0,-104.235	0/1:110:58,51:58:2065:51:1832:-131.987,0,-152.947	0/1:87:44,43:44:1569:43:1548:-113.328,0,-115.31	0/1:56:22,34:22:792:34:1216:-92.8889,0,-54.748	1/1:78:0,78:0:0:78:2793:-251.608,-23.4803,0	0/1:74:49,25:49:1764:25:881:-57.319,0,-136.768	1/1:27:0,27:0:0:27:964:-87.0768,-8.12781,0	0/1:56:35,21:35:1245:21:752:-51.1452,0,-95.495	1/1:41:0,41:0:0:41:1476:-133.102,-12.3422,0	1/1:232:0,232:0:0:232:8248:-742.1,-69.839,0	0/1:169:76,93:76:2721:93:3295:-245.671,0,-194.257	1/1:105:0,105:0:0:105:3761:-338.683,-31.6082,0	1/1:74:0,74:0:0:74:2659:-239.555,-22.2762,0	0/1:107:43,64:43:1529:64:2300:-175,0,-105.691	1/1:123:0,123:0:0:123:4397:-395.501,-37.0267,0	0/1:238:96,142:96:3448:142:5096:-387.126,0,-238.887	1/1:346:1,345:1:36:345:12370:-1108.05,-100.558,0	1/1:22:0,22:0:0:22:792:-71.6057,-6.62266,0	0/1:243:149,94:149:5227:94:3369:-230.274,0,-397.294	0/1:102:39,63:39:1370:63:2226:-169.789,0,-92.8895	0/1:85:49,36:49:1749:36:1296:-91.3564,0,-132.105	0/1:16:7,9:7:237:9:324:-24.686,0,-16.8426	1/1:33:0,33:0:0:33:1188:-107.229,-9.93399,0	1/1:7:0,7:0:0:7:237:-21.6591,-2.10721,0	0/1:15:12,3:12:432:3:104:-5.18736,0,-34.7057	1/1:23:1,22:1:36:22:792:-68.0056,-3.32542,0	0/1:201:115,86:115:4102:86:3096:-218.359,0,-308.847	1/1:114:0,114:0:0:114:4072:-366.285,-34.3174,0	1/1:71:0,71:0:0:71:2552:-229.927,-21.3731,0	0/1:4:1,3:1:36:3:108:-8.87105,0,-2.39415	1/1:129:0,129:0:0:129:4640:-417.467,-38.8329,0	1/1:26:0,26:0:0:26:936:-84.5579,-7.82678,0	1/1:174:0,174:0:0:174:6237:-561.272,-52.3792,0	1/1:56:0,56:0:0:56:1977:-178.172,-16.8577,0	1/1:53:0,53:0:0:53:1892:-170.546,-15.9546,0	0/1:101:38,63:38:1353:63:2253:-172.541,0,-91.6644	1/1:190:0,190:0:0:190:6820:-613.577,-57.1957,0	0/1:114:57,57:57:1992:57:2040:-149.555,0,-145.229	1/1:75:0,75:0:0:75:2681:-241.532,-22.5773,0	0/1:198:69,129:69:2457:129:4594:-353.991,0,-161.779	1/1:127:0,127:0:0:127:4553:-409.927,-38.2308,0	0/1:8:4,4:4:144:4:140:-10.5363,0,-10.9054	0/1:159:61,98:61:2173:98:3505:-267.631,0,-147.963	0/1:57:24,33:24:856:33:1184:-89.7096,0,-60.174	0/1:14:5,9:5:180:9:324:-25.291,0,-12.3376	0/1:193:93,100:93:3272:100:3600:-266.106,0,-236.598	1/1:67:0,67:0:0:67:2389:-214.836,-20.169,0	0/1:33:12,21:12:432:21:752:-58.0723,0,-29.2863	1/1:19:0,19:0:0:19:684:-61.8903,-5.71957,0	1/1:141:0,141:0:0:141:5049:-454.492,-42.4452,0	0/1:95:42,53:42:1497:53:1908:-143.394,0,-106.425	1/1:17:0,17:0:0:17:612:-55.4134,-5.11751,0	1/1:137:0,137:0:0:137:4898:-440.513,-41.2411,0	1/1:212:3,209:3:108:209:7479:-662.907,-53.7432,0	1/1:59:0,59:0:0:59:2104:-189.63,-17.7608,0	0/1:107:48,59:48:1716:59:2113:-158.219,0,-122.515	0/1:142:69,73:69:2472:73:2605:-191.932,0,-179.983	1/1:207:2,205:2:72:205:7318:-651.801,-55.4765,0	1/1:48:0,48:0:0:48:1712:-153.988,-14.4494,0	1/1:49:0,49:0:0:49:1760:-158.678,-14.7505,0	0/1:43:21,22:21:752:22:792:-58.6614,0,-55.062	0/1:18:7,11:7:248:11:392:-30.2015,0,-17.241	1/1:155:0,155:0:0:155:5568:-500.989,-46.6597,0	1/1:111:0,111:0:0:111:3992:-359.465,-33.4143,0	0/1:148:51,97:51:1817:97:3473:-268.219,0,-119.257	1/1:240:0,240:0:0:240:8574:-771.637,-72.2472,0	1/1:92:0,92:0:0:92:3299:-297.118,-27.6948,0	0/1:159:119,40:119:4261:40:1421:-80.3217,0,-335.803	0/1:12:3,9:3:108:9:324:-25.8926,0,-6.46281	1/1:145:0,145:0:0:145:5208:-468.614,-43.6494,0	0/1:130:62,67:62:2198:67:2408:-177.556,0,-159.037	1/1:137:0,137:0:0:137:4912:-442.163,-41.2411,0	1/1:51:0,51:0:0:51:1828:-164.795,-15.3525,0	0/1:61:33,28:33:1184:28:1008:-72.6735,0,-88.5055	1/1:37:0,37:0:0:37:1312:-118.379,-11.1381,0	1/1:134:0,134:0:0:134:4813:-431.871,-40.338,0	0/1:19:8,11:8:288:11:396:-30.2632,0,-20.5478	1/1:62:1,61:1:36:61:2196:-194.208,-15.0656,0	0/1:66:38,28:38:1360:28:1004:-70.8079,0,-102.833	0/1:41:20,21:20:690:21:756:-56.025,0,-50.0746	0/1:110:60,50:60:2144:50:1796:-128.809,0,-160.114	0/1:54:37,17:37:1328:17:612:-39.1578,0,-103.531	1/1:184:1,183:1:36:183:6527:-583.841,-51.7912,0	1/1:111:0,111:0:0:111:3996:-359.827,-33.4143,0
chr12	24960120	.	GT	AA,GA	195780	PASS	AB=0.511322,0.486866;ABP=7.92758,9.627;AC=142,46;AF=0.755319,0.244681;AN=188;AO=6999,2164;CIGAR=2X,1M1X;DP=9179;DPB=9180;DPRA=0,1.1927;EPP=15201.1,4702.08;EPPR=0;GTI=1;LEN=2,1;MEANALT=1.75532,2.14035;MQM=59.7624,59.9205;MQMR=0;NS=94;NUMALT=2;ODDS=1.00771;PAIRED=0,0;PAIREDR=0;PAO=2,0;PQA=72,0;PQR=0;PRO=0;QA=247826,77483;QR=0;RO=0;RPL=6999,2164;RPP=15201.1,4702.08;RPPR=0;RPR=0,0;RUN=1,1;SAF=0,0;SAP=15201.1,4702.08;SAR=6999,2164;SRF=0;SRP=0;SRR=0;TYPE=complex,snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:82:0,82,0:0:0:82,0:2911,0:-262.194,-24.6845,0,-262.194,-24.6845,-262.194	1/1:60:0,59,1:0:0:59,1:2101,36:-188.735,-17.7608,0,-185.798,-14.4635,-185.497	1/2:218:0,135,82:0:0:135,82:4780,2922:-627.539,-238.187,-197.548,-389.367,0,-364.683	1/2:251:0,125,126:0:0:125,126:4448,4497:-729.475,-366.968,-329.34,-362.863,0,-324.933	1/2:59:0,43,16:0:0:43,16:1544,572:-172.947,-46.9969,-34.0527,-126.308,0,-121.492	1/2:16:0,4,12:0:0:4,12:144,428:-46.996,-35.2464,-34.0423,-12.1086,0,-8.49621	1/1:67:0,67,0:0:0:67,0:2389,0:-215.261,-20.169,0,-215.261,-20.169,-215.261	1/2:135:0,53,82:0:0:53,82:1865,2902:-388.422,-236.643,-220.688,-152.132,0,-127.447	1/2:85:0,44,41:0:0:44,41:1554,1476:-247.32,-120.794,-107.549,-126.882,0,-114.54	1/1:83:0,82,1:0:0:82,1:2904,36:-261.216,-24.6845,0,-258.278,-21.3872,-257.977	1/2:70:0,31,39:0:0:31,39:1083,1400:-202.65,-114.559,-105.227,-88.4446,0,-76.7044	1/2:107:0,49,58:0:0:49,58:1760,2088:-314.302,-170.73,-155.98,-143.932,0,-126.472	1/2:82:0,39,43:0:0:39,43:1400,1548:-240.859,-126.668,-114.928,-114.55,0,-101.606	1/2:56:0,34,22:0:0:34,22:1211,777:-162.334,-63.6277,-53.3927,-99.0602,0,-92.4375	1/1:78:0,77,1:0:0:77,1:2760,32:-248.322,-23.1793,0,-245.744,-20.281,-245.443	1/2:73:0,24,49:0:0:24,49:850,1764:-213.525,-144.293,-137.069,-69.5878,0,-54.8373	1/1:28:0,28,0:0:0:28,0:991,0:-89.5029,-8.42884,0,-89.5029,-8.42884,-89.5029	1/2:57:0,21,36:0:0:21,36:756,1296:-167.789,-106.107,-99.7852,-62.0422,0,-51.2052	1/1:40:0,40,0:0:0:40,0:1413,0:-127.442,-12.0412,0,-127.442,-12.0412,-127.442	1/1:227:0,227,0:0:0:227,0:8030,0:-722.535,-68.3338,0,-722.535,-68.3338,-722.535	1/2:164:0,87,77:0:0:87,77:3075,2737:-472.924,-222.542,-196.352,-250.377,0,-227.197	1/1:103:0,103,0:0:0:103,0:3675,0:-330.949,-31.0061,0,-330.949,-31.0061,-330.949	1/1:72:0,71,0:0:0:71,0:2513,0:-226.11,-21.3731,0,-226.11,-21.3731,-226.11	1/2:109:0,66,43:0:0:66,43:2344,1540:-316.889,-125.949,-106.081,-191.297,0,-178.353	1/1:123:0,123,0:0:0:123,0:4364,0:-392.767,-37.0267,0,-392.767,-37.0267,-392.767	1/2:235:0,138,95:0:0:138,95:4884,3404:-675.482,-277.668,-236.126,-397.864,0,-369.266	1/1:343:0,342,1:0:0:342,1:12148,36:-1091.44,-102.952,0,-1088.5,-99.655,-1088.2	1/1:22:0,22,0:0:0:22,0:788,0:-71.245,-6.62266,0,-71.245,-6.62266,-71.245	1/2:233:0,90,143:0:0:90,143:3222,5111:-679.729,-416.98,-389.887,-263.106,0,-220.059	1/2:100:0,62,38:0:0:62,38:2178,1360:-288.298,-111.261,-92.5976,-177.391,0,-165.952	1/2:82:0,34,48:0:0:34,48:1196,1720:-237.99,-140.636,-130.401,-97.7078,0,-83.2584	1/2:15:0,8,7:0:0:8,7:280,252:-43.6937,-20.9217,-18.5135,-23.1271,0,-21.0199	1/1:34:0,33,0:0:0:33,0:1173,0:-105.556,-9.93399,0,-105.556,-9.93399,-105.556	1/1:7:0,7,0:0:0:7,0:241,0:-22.0247,-2.10721,0,-22.0247,-2.10721,-22.0247	1/2:15:0,3,12:0:0:3,12:106,432:-44.2403,-35.6088,-34.7057,-8.98601,0,-5.37365	1/1:23:0,22,1:0:0:22,1:786,36:-70.7029,-6.62266,0,-67.7654,-3.32542,-67.4644	1/2:196:0,82,114:0:0:82,114:2935,4077:-572.138,-332.797,-308.112,-239.699,0,-205.382	1/1:111:0,111,0:0:0:111,0:3897,0:-350.62,-33.4143,0,-350.62,-33.4143,-350.62	1/1:71:0,71,0:0:0:71,0:2517,0:-226.77,-21.3731,0,-226.77,-21.3731,-226.77	1/2:4:0,3,1:0:0:3,1:108,36:-12.1095,-3.29724,-2.39415,-9.17208,0,-8.87105	1/1:126:0,126,0:0:0:126,0:4415,0:-397.347,-37.9298,0,-397.347,-37.9298,-397.347	1/1:24:0,23,0:0:0:23,0:813,0:-73.1296,-6.92369,0,-73.1296,-6.92369,-73.1296	1/1:172:0,170,1:0:0:170,1:5960,36:-536.193,-51.1751,0,-533.312,-48.2416,-533.011	1/1:55:0,55,0:0:0:55,0:1923,0:-173.326,-16.5567,0,-173.326,-16.5567,-173.326	1/1:49:0,49,0:0:0:49,0:1743,0:-157.142,-14.7505,0,-157.142,-14.7505,-157.142	1/2:100:0,62,38:0:0:62,38:2193,1368:-290.507,-111.982,-93.3178,-178.883,0,-167.444	1/1:184:0,184,0:0:0:184,0:6502,0:-585.113,-55.3895,0,-585.113,-55.3895,-585.113	1/2:113:0,57,56:0:0:57,56:1996,2012:-326.891,-164.495,-147.337,-162.75,0,-145.893	1/1:75:0,75,0:0:0:75,0:2680,0:-241.445,-22.5773,0,-241.445,-22.5773,-241.445	1/2:195:0,126,69:0:0:126,69:4494,2480:-569.016,-202.682,-164.752,-366.692,0,-345.921	1/1:122:0,122,0:0:0:122,0:4332,0:-390.055,-36.7257,0,-390.055,-36.7257,-390.055	1/2:8:0,4,4:0:0:4,4:144,144:-23.8592,-12.1095,-10.9054,-12.1095,0,-10.9054	1/2:157:0,97,60:0:0:97,60:3451,2148:-456.601,-175.518,-146.318,-281.441,0,-263.379	1/2:55:0,31,23:0:0:31,23:1069,820:-153.642,-66.8107,-57.4788,-86.8228,0,-79.8991	1/2:14:0,9,5:0:0:9,5:320,180:-41.1217,-15.0469,-12.3376,-26.433,0,-24.9279	1/2:193:0,100,93:0:0:100,93:3553,3317:-560.27,-270.752,-240.649,-289.875,0,-261.879	1/1:65:0,65,0:0:0:65,0:2291,0:-205.593,-19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chr12	25203027	.	GTTTC	CTTTC,CTTTT	200022	PASS	AB=0.504185,0.493162;ABP=3.7554,5.00004;AC=141,47;AF=0.75,0.25;AN=188;AO=6938,2423;CIGAR=1X4M,1X3M1X;DP=9384;DPB=9384.4;DPRA=0,1.16354;EPP=15068.7,5264.49;EPPR=5.18177;GTI=1;LEN=1,5;MEANALT=1.78723,2.26923;MQM=59.6061,53.837;MQMR=56;NS=94;NUMALT=2;ODDS=0.840856;PAIRED=0,0;PAIREDR=0;PAO=1,1;PQA=36,36;PQR=0;PRO=0;QA=247612,86117;QR=27;RO=1;RPL=6938,2423;RPP=15068.7,5264.49;RPPR=5.18177;RPR=0,0;RUN=1,1;SAF=0,0;SAP=15068.7,5264.49;SAR=6938,2423;SRF=0;SRP=5.18177;SRR=1;TYPE=snp,complex	GT:DP:AD:RO:QR:AO:QA:GL	1/1:58:0,58,0:0:0:58,0:2054,0:-184.89,-17.4597,0,-184.89,-17.4597,-184.89	1/1:88:0,88,0:0:0:88,0:3156,0:-284.216,-26.4906,0,-284.216,-26.4906,-284.216	1/2:191:0,91,100:0:0:91,100:3272,3530:-553.471,-286.537,-259.144,-267.289,0,-237.186	1/2:296:0,144,151:0:0:144,151:5124,5356:-851.316,-434.136,-390.788,-417.214,0,-371.758	1/2:51:0,26,25:0:0:26,25:930,896:-148.733,-73.1699,-65.3431,-75.92,0,-68.3943	1/2:13:0,6,7:0:0:6,7:216,252:-38.4806,-20.8639,-19.0577,-17.976,0,-15.8688	1/1:79:0,79,0:0:0:79,0:2829,0:-254.74,-23.7814,0,-254.74,-23.7814,-254.74	1/2:155:0,84,71:0:0:84,71:2990,2505:-447.058,-203.445,-178.158,-243.966,0,-222.593	1/2:91:0,36,55:0:0:36,55:1291,1962:-264.537,-159.248,-148.411,-105.646,0,-89.0891	1/1:80:0,79,0:0:0:79,0:2829,0:-254.463,-23.7814,0,-254.463,-23.7814,-254.463	1/2:57:0,34,22:0:0:34,22:1224,780:-163.099,-63.223,-52.9879,-99.8815,0,-93.2588	1/2:112:0,55,56:0:0:55,56:1961,2012:-323.084,-163.242,-146.685,-159.866,0,-143.008	1/2:73:0,38,34:0:0:38,34:1364,1203:-208.805,-97.5882,-86.1491,-111.213,0,-100.978	1/2:48:0,21,27:0:0:21,27:752,963:-139.96,-78.6378,-72.3161,-61.6791,0,-53.5513	1/1:90:0,90,0:0:0:90,0:3217,0:-289.739,-27.0927,0,-289.739,-27.0927,-289.739	1/2:76:0,43,32:0:0:43,32:1544,1141:-218.774,-92.8227,-79.8784,-125.949,0,-116.317	1/1:40:0,40,0:0:0:40,0:1421,0:-128.183,-12.0412,0,-128.183,-12.0412,-128.183	1/2:48:0,24,24:0:0:24,24:849,857:-138.669,-69.528,-62.3033,-69.4949,0,-62.2702	1/1:42:0,42,0:0:0:42,0:1508,0:-135.988,-12.6433,0,-135.988,-12.6433,-135.988	1/1:235:0,235,0:0:0:235,0:8391,0:-755.081,-70.7421,0,-755.081,-70.7421,-755.081	1/2:187:0,82,105:0:0:82,105:2944,3746:-544.494,-304.356,-279.671,-240.495,0,-208.887	1/1:118:0,118,0:0:0:118,0:4194,0:-377.621,-35.5215,0,-377.621,-35.5215,-377.621	1/1:112:0,112,0:0:0:112,0:4000,0:-360.178,-33.7154,0,-360.178,-33.7154,-360.178	1/2:86:0,44,42:0:0:44,42:1569,1503:-250.629,-122.736,-109.49,-128.25,0,-115.606	1/1:76:0,76,0:0:0:76,0:2709,0:-244.03,-22.8783,0,-244.03,-22.8783,-244.03	1/2:263:0,165,96:0:0:165,96:5908,3431:-760.981,-279.188,-229.518,-481.864,0,-452.965	1/1:241:0,240,0:0:0:240,0:8542,0:-768.176,-72.2472,0,-768.176,-72.2472,-768.176	1/1:21:0,21,0:0:0:21,0:752,0:-68.0063,-6.32163,0,-68.0063,-6.32163,-68.0063	1/2:407:0,208,198:0:0:208,198:7401,7020:-1173.32,-570.207,-507.593,-603.184,0,-543.58	1/2:140:0,78,62:0:0:78,62:2755,2204:-403,-178.802,-155.321,-224.552,0,-205.888	1/2:128:0,45,83:0:0:45,83:1597,2950:-370.04,-239.925,-226.379,-130.469,0,-105.484	1/2:8:0,7,1:0:0:7,1:248,36:-23.4905,-3.29214,-1.18493,-20.557,0,-20.256	1/1:16:0,16,0:0:0:16,0:576,0:-52.1704,-4.81648,0,-52.1704,-4.81648,-52.1704	1/1:7:0,7,0:0:0:7,0:248,0:-22.6626,-2.10721,0,-22.6626,-2.10721,-22.6626	1/2:4:0,3,1:0:0:3,1:108,36:-12.0954,-3.28202,-2.37893,-9.17208,0,-8.87105	1/2:5:0,2,3:0:0:2,3:72,108:-15.004,-9.13699,-8.53493,-6.22607,0,-5.32298	1/2:187:0,105,82:0:0:105,82:3757,2930:-545.387,-239.086,-207.478,-306.659,0,-281.974	1/1:137:0,137,0:0:0:137,0:4898,0:-440.935,-41.2411,0,-440.935,-41.2411,-440.935	1/1:40:0,40,0:0:0:40,0:1436,0:-129.528,-12.0412,0,-129.528,-12.0412,-129.528	1/1:5:0,4,0:0:0:4,0:144,0:-12.9542,-1.20412,0,-12.9542,-1.20412,-12.9542	1/1:133:0,133,0:0:0:133,0:4749,0:-427.432,-40.037,0,-427.432,-40.037,-427.432	1/1:17:0,17,0:0:0:17,0:612,0:-55.4134,-5.11751,0,-55.4134,-5.11751,-55.4134	1/1:218:0,218,0:0:0:218,0:7749,0:-696.809,-65.6245,0,-696.809,-65.6245,-696.809	1/1:72:0,72,0:0:0:72,0:2577,0:-232.02,-21.6742,0,-232.02,-21.6742,-232.02	1/1:64:0,64,0:0:0:64,0:2281,0:-205.501,-19.2659,0,-205.501,-19.2659,-205.501	1/2:107:0,59,48:0:0:59,48:2105,1716:-311.495,-140.169,-122.409,-171.683,0,-157.233	1/1:125:0,125,0:0:0:125,0:4463,0:-401.631,-37.6288,0,-401.631,-37.6288,-401.631	1/2:215:0,109,105:0:0:109,105:3894,3731:-620.796,-303.338,-270.526,-317.463,0,-285.855	1/1:78:0,78,0:0:0:78,0:2788,0:-251.156,-23.4803,0,-251.156,-23.4803,-251.156	1/2:136:0,85,50:0:0:85,50:3044,1781:-392.776,-144.536,-118.949,-248.236,0,-233.184	1/1:122:0,122,0:0:0:122,0:4342,0:-390.949,-36.7257,0,-390.949,-36.7257,-390.949	1/2:6:0,5,1:0:0:5,1:180,35:-17.8911,-3.19553,-1.69038,-15.0469,0,-14.7459	1/2:153:0,54,99:0:0:54,99:1937,3492:-440.617,-282.677,-266.422,-158.296,0,-128.494	1/2:79:0,22,57:0:0:22,57:792,2017:-229.099,-164.474,-157.852,-64.983,0,-47.8243	1/2:10:0,9,1:0:0:9,1:324,36:-29.7258,-3.2882,-0.578928,-26.7966,0,-26.4956	1/2:205:0,100,105:0:0:100,105:3561,3712:-591.422,-301.216,-271.113,-290.561,0,-258.953	1/1:55:0,54,0:0:0:54,0:1929,0:-173.523,-16.2556,0,-173.523,-16.2556,-173.523	1/2:14:0,11,3:0:0:11,3:396,105:-41.1524,-8.83221,-5.52088,-32.6705,0,-31.7674	1/1:20:0,20,0:0:0:20,0:690,0:-62.4168,-6.0206,0,-62.4168,-6.0206,-62.4168	1/1:101:0,101,0:0:0:101,0:3605,0:-324.64,-30.404,0,-324.64,-30.404,-324.64	1/2:75:0,42,33:0:0:42,33:1508,1172:-218.534,-95.5257,-82.8824,-123.364,0,-113.43	1/1:15:1,14,0:1:27:14,0:485,0:-41.2775,-1.816,0,-41.5786,-4.21442,-43.7019	1/1:221:0,221,0:0:0:221,0:7910,0:-711.78,-66.5276,0,-711.78,-66.5276,-711.78	1/1:166:0,165,1:0:0:165,1:5868,36:-527.713,-49.67,0,-524.778,-46.3753,-524.477	1/2:69:0,62,7:0:0:62,7:2228,251:-202.516,-20.7989,-2.13508,-182.075,0,-179.968	1/2:122:0,53,69:0:0:53,69:1904,2436:-353.21,-197.887,-181.933,-155.678,0,-134.907	1/2:142:0,54,88:0:0:54,88:1898,3134:-409.35,-254.897,-238.642,-154.806,0,-128.315	1/1:169:0,166,2:0:0:166,2:5938,72:-534.148,-49.971,0,-528.278,-44.0876,-527.676	1/2:34:0,16,18:0:0:16,18:576,645:-99.8529,-52.8816,-48.0651,-47.33,0,-41.9115	1/1:65:0,64,0:0:0:64,0:2296,0:-206.53,-19.2659,0,-206.53,-19.2659,-206.53	1/2:39:0,19,20:0:0:19,20:680,718:-114.306,-58.8545,-53.135,-55.8096,0,-49.789	1/2:18:0,6,12:0:0:6,12:216,427:-52.7548,-35.1288,-33.3226,-17.9843,0,-14.372	1/1:128:0,127,0:0:0:127,0:4544,0:-408.468,-38.2308,0,-408.468,-38.2308,-408.468	1/1:73:0,73,0:0:0:73,0:2582,0:-232.533,-21.9752,0,-232.533,-21.9752,-232.533	1/2:210:0,101,109:0:0:101,109:3530,3894:-603.344,-316.209,-285.805,-287.487,0,-254.675	1/1:170:0,170,0:0:0:170,0:6048,0:-544.321,-51.1751,0,-544.321,-51.1751,-544.321	1/1:56:0,56,0:0:0:56,0:2012,0:-181.301,-16.8577,0,-181.301,-16.8577,-181.301	1/2:99:0,48,51:0:0:48,51:1705,1820:-286.731,-147.821,-133.372,-139.265,0,-123.912	1/1:32:0,30,2:0:0:30,2:1035,72:-93.0945,-9.0309,0,-87.235,-2.81343,-86.633	1/1:118:0,118,0:0:0:118,0:4229,0:-380.626,-35.5215,0,-380.626,-35.5215,-380.626	1/2:195:0,93,100:0:0:93,100:3314,3521:-553.339,-283.291,-255.295,-270.056,0,-239.953	1/1:219:0,218,1:0:0:218,1:7802,36:-701.627,-65.6245,0,-698.692,-62.3299,-698.39	1/1:54:0,53,1:0:0:53,1:1908,36:-171.638,-15.9546,0,-168.703,-12.6599,-168.402	1/2:75:0,32,42:0:0:32,42:1137,1493:-214.215,-121.566,-111.933,-92.6536,0,-80.0103	1/1:61:0,61,0:0:0:61,0:2181,0:-196.552,-18.3628,0,-196.552,-18.3628,-196.552	1/1:154:0,153,0:0:0:153,0:5472,0:-492.172,-46.0576,0,-492.172,-46.0576,-492.172	1/2:30:0,15,15:0:0:15,15:536,536:-87.6439,-43.9412,-39.4258,-44.0594,0,-39.5439	1/1:64:0,63,0:0:0:63,0:2268,0:-204.023,-18.9649,0,-204.023,-18.9649,-204.023	1/2:69:0,33,36:0:0:33,36:1188,1286:-201.757,-104.871,-94.9371,-97.2434,0,-86.4063	1/2:36:0,28,8:0:0:28,8:993,287:-104.499,-23.6054,-15.1766,-81.2491,0,-78.8408	1/2:67:0,43,24:0:0:43,24:1510,859:-193.062,-70.1724,-57.2281,-123.245,0,-116.02	1/2:68:0,30,38:0:0:30,38:1076,1340:-197.045,-109.279,-100.248,-88.122,0,-76.6828	1/1:127:0,127,0:0:0:127,0:4538,0:-408.577,-38.2308,0,-408.577,-38.2308,-408.577	1/1:103:0,103,0:0:0:103,0:3699,0:-333.09,-31.0061,0,-333.09,-31.0061,-333.09
chr12	25331933	.	C	T	336258	PASS	AB=0.480899;ABP=30.2192;AC=140;AF=0.744681;AN=188;AO=11911;CIGAR=1X;DP=16387;DPB=16387;DPRA=0;EPP=3400.59;EPPR=1503.03;GTI=0;LEN=1;MEANALT=1.02128;MQM=59.7455;MQMR=59.8963;NS=94;NUMALT=1;ODDS=0.973112;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=424850;QR=159774;RO=4474;RPL=1628;RPP=13659.5;RPPR=4458.99;RPR=10283;RUN=1;SAF=5425;SAP=208.238;SAR=6486;SRF=2080;SRP=50.8642;SRR=2394;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:121:0,121:0:0:121:4323:-388.942,-36.4246,0	1/1:179:0,179:0:0:179:6376:-573.805,-53.8844,0	0/1:245:122,123:122:4372:123:4374:-320.022,0,-319.9	0/1:357:191,165:191:6828:165:5909:-424.51,0,-507.214	0/1:172:96,76:96:3439:76:2701:-191.556,0,-257.943	0/1:112:55,57:55:1960:57:2028:-149.029,0,-142.665	1/1:171:0,171:0:0:171:6128:-551.608,-51.4761,0	0/1:268:121,147:121:4321:147:5226:-389.757,0,-308.383	0/1:251:122,129:122:4351:129:4591:-337.762,0,-316.167	1/1:147:0,147:0:0:147:5232:-470.97,-44.2514,0	0/1:164:78,86:78:2795:86:3073:-227.428,0,-202.41	0/1:269:140,129:140:4979:129:4594:-332.244,0,-367.259	0/1:208:102,106:102:3632:106:3779:-277.564,0,-264.47	0/1:196:99,97:99:3516:97:3465:-253.013,0,-257.644	1/1:200:0,200:0:0:200:7176:-645.826,-60.206,0	0/1:216:107,109:107:3815:109:3887:-285.002,0,-278.481	1/1:144:0,144:0:0:144:5133:-461.998,-43.3483,0	0/1:135:72,63:72:2575:63:2243:-161.472,0,-191.357	1/1:108:0,108:0:0:108:3857:-347.288,-32.5112,0	1/1:223:0,223:0:0:223:7927:-713.407,-67.1297,0	0/1:271:137,134:137:4908:134:4768:-347.676,0,-360.285	1/1:68:0,68:0:0:68:2429:-218.857,-20.47,0	1/1:164:0,164:0:0:164:5856:-527.096,-49.3689,0	0/1:162:89,73:89:3164:73:2620:-187.217,0,-236.188	1/1:161:0,161:0:0:161:5768:-519.235,-48.4658,0	0/1:393:196,197:196:6982:197:7045:-515.765,0,-510.143	1/1:404:0,404:0:0:404:14399:-1295.49,-121.616,0	1/1:67:1,66:1:36:66:2345:-207.71,-16.5707,0	0/1:337:189,148:189:6727:148:5290:-374.76,0,-504.05	0/1:137:73,64:73:2588:64:2246:-161.108,0,-191.905	0/1:168:84,84:84:2999:84:3012:-220.721,0,-219.568	0/1:14:8,6:8:288:6:216:-15.5761,0,-22.053	1/1:39:2,37:2:72:37:1316:-111.905,-4.90345,0	1/1:7:0,7:0:0:7:252:-23.029,-2.10721,0	0/1:12:9,3:9:320:3:104:-6.09045,0,-25.53	0/1:21:5,16:5:176:16:572:-45.4918,0,-9.86339	0/1:575:326,249:326:11672:249:8813:-620.03,0,-877.247	1/1:123:1,122:1:36:122:4318:-385.182,-33.4284,0	1/1:158:0,158:0:0:158:5656:-509.008,-47.5627,0	0/1:8:2,6:2:72:6:212:-17.0166,0,-4.42848	1/1:205:0,205:0:0:205:7337:-660.327,-61.7112,0	1/1:73:0,73:0:0:73:2593:-233.572,-21.9752,0	1/1:389:1,388:1:36:388:13816:-1239.19,-113.502,0	1/1:211:0,211:0:0:211:7497:-674.756,-63.5173,0	1/1:141:0,141:0:0:141:4990:-449.23,-42.4452,0	0/1:146:95,51:95:3372:51:1801:-118.419,0,-259.732	1/1:126:0,126:0:0:126:4505:-405.551,-37.9298,0	0/1:222:125,97:125:4467:97:3480:-246.581,0,-335.365	1/1:137:0,137:0:0:137:4904:-441.492,-41.2411,0	0/1:217:111,106:111:3996:106:3797:-276.578,0,-294.501	1/1:193:0,193:0:0:193:6849:-616.46,-58.0988,0	0/1:17:10,7:10:360:7:252:-17.9114,0,-27.626	0/1:200:111,89:111:3950:89:3192:-227.239,0,-295.477	0/1:54:29,25:29:1044:25:900:-65.0654,0,-78.0192	0/1:7:2,5:2:72:5:180:-14.4449,0,-4.72951	0/1:263:152,111:152:5460:111:3976:-278.665,0,-412.349	1/1:138:0,138:0:0:138:4922:-443.129,-41.5421,0	0/1:13:5,8:5:180:8:288:-22.354,0,-12.6387	1/1:23:0,23:0:0:23:805:-72.761,-6.92369,0	1/1:152:1,151:1:32:151:5406:-483.398,-42.5572,0	0/1:227:118,109:118:4221:109:3904:-283.203,0,-311.689	1/1:12:0,12:0:0:12:424:-38.4964,-3.61236,0	1/1:185:2,183:2:72:183:6509:-578.986,-48.8538,0	1/1:247:1,246:1:36:246:8786:-786.823,-70.7561,0	1/1:100:3,97:3:108:97:3450:-300.629,-20.0278,0	0/1:106:60,46:60:2148:46:1637:-115.708,0,-161.675	0/1:280:139,140:139:4983:140:5013:-366.934,0,-364.263	1/1:149:1,148:1:36:148:5301:-473.608,-41.2552,0	0/1:96:53,43:53:1887:43:1516:-107.788,0,-141.206	1/1:74:1,73:1:36:73:2624:-232.786,-18.6779,0	0/1:205:116,89:116:4160:89:3122:-219.47,0,-312.866	0/1:30:11,19:11:392:19:680:-52.4983,0,-26.5892	1/1:143:0,143:0:0:143:5081:-457.324,-43.0473,0	1/1:149:1,148:1:36:148:5299:-473.441,-41.2552,0	0/1:372:174,198:174:6219:198:7059:-523.291,0,-447.819	1/1:207:0,207:0:0:207:7323:-658.953,-62.3132,0	1/1:265:0,265:0:0:265:9501:-854.867,-79.773,0	0/1:227:97,130:97:3456:130:4624:-347.92,0,-242.912	0/1:25:11,14:11:396:14:504:-38.1723,0,-28.457	1/1:190:0,190:0:0:190:6799:-611.942,-57.1957,0	0/1:226:104,122:104:3709:122:4368:-325.243,0,-265.697	1/1:329:1,328:1:36:328:11730:-1051.94,-95.4406,0	1/1:226:0,226:0:0:226:8039:-723.482,-68.0328,0	0/1:166:87,79:87:3101:79:2831:-205.049,0,-229.345	1/1:207:1,206:1:36:206:7318:-655.05,-58.7149,0	1/1:360:2,358:2:72:358:12772:-1142.4,-101.534,0	0/1:90:42,48:42:1512:48:1720:-127.935,0,-109.26	1/1:187:0,187:0:0:187:6648:-597.75,-56.2926,0	0/1:211:105,106:105:3720:106:3804:-279.011,0,-271.431	0/1:103:68,35:68:2419:35:1260:-82.6994,0,-186.96	0/1:223:97,126:97:3464:126:4497:-337.724,0,-244.772	0/1:169:110,59:110:3927:59:2112:-139.466,0,-302.749	1/1:198:0,198:0:0:198:7074:-636.71,-59.6039,0	1/1:301:0,301:0:0:301:10772:-969.16,-90.61,0
chr12	25332701	.	T	C	49038.3	PASS	AB=0.480373;ABP=23.4677;AC=48;AF=0.255319;AN=188;AO=2953;CIGAR=1X;DP=12887;DPB=12887;DPRA=0.941887;EPP=6415.37;EPPR=21563.6;GTI=1;LEN=1;MEANALT=1.06897;MQM=59.9472;MQMR=59.9886;NS=94;NUMALT=1;ODDS=10.7561;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=105719;QR=355973;RO=9929;RPL=0;RPP=6415.37;RPPR=21563.6;RPR=2953;RUN=1;SAF=2953;SAP=6415.37;SAR=0;SRF=9929;SRP=21563.6;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:45:45,0:45:1620:0:0:0,-13.5463,-146.09	0/0:210:210,0:210:7536:0:0:0,-63.2163,-678.278	0/1:177:70,107:70:2516:107:3814:-290.152,0,-173.408	0/1:228:118,110:118:4224:110:3936:-285.708,0,-311.704	0/1:86:48,38:48:1724:38:1352:-96.0912,0,-129.557	0/1:16:14,2:14:504:2:72:-2.02024,0,-40.8816	0/0:195:195,0:195:6972:0:0:0,-58.7008,-627.541	0/1:289:168,120:168:6036:120:4308:-300.825,0,-456.276	0/1:71:35,35:35:1260:35:1260:-92.2732,0,-92.2736	0/0:124:124,0:124:4417:0:0:0,-37.3277,-397.703	0/1:113:76,37:76:2736:37:1324:-85.4457,0,-212.465	0/1:82:44,38:44:1580:38:1352:-97.2959,0,-117.807	0/1:87:42,45:42:1503:45:1620:-119.9,0,-109.374	0/1:99:54,45:54:1917:45:1604:-114.848,0,-143.003	0/0:72:72,0:72:2588:0:0:0,-21.6742,-233.168	0/1:91:43,48:43:1540:48:1720:-127.692,0,-111.499	0/0:79:79,0:79:2836:0:0:0,-23.7814,-255.478	0/1:74:39,35:39:1400:35:1252:-90.7089,0,-104.023	0/0:70:70,0:70:2504:0:0:0,-21.0721,-225.613	0/0:373:373,0:373:13353:0:0:0,-112.284,-1201.56	0/1:178:101,77:101:3612:77:2753:-194.427,0,-271.701	0/0:206:206,0:206:7380:0:0:0,-62.0122,-664.247	0/0:102:102,0:102:3672:0:0:0,-30.7051,-330.681	0/1:125:64,61:64:2300:61:2152:-156.314,0,-169.632	0/0:164:164,0:164:5884:0:0:0,-49.3689,-529.669	0/1:431:237,194:237:8500:194:6948:-495.627,0,-635.253	0/0:442:441,1:441:15813:1:36:0,-129.457,-1419.26	0/0:57:57,0:57:2044:0:0:0,-17.1587,-184.232	0/1:598:305,293:305:10956:293:10512:-765.973,0,-805.915	0/1:114:66,48:66:2360:48:1724:-121.128,0,-178.341	0/1:148:75,73:75:2688:73:2609:-190.504,0,-197.612	0/1:8:2,6:2:72:6:216:-17.3823,0,-4.42848	0/0:36:36,0:36:1296:0:0:0,-10.8371,-116.166	0/0:18:18,0:18:648:0:0:0,-5.41854,-58.6519	0/1:18:7,11:7:252:11:392:-30.2015,0,-17.6104	0/1:21:4,17:4:144:17:612:-49.0918,0,-6.99199	0/1:224:104,120:104:3721:120:4305:-320.195,0,-267.659	0/0:233:233,0:233:8341:0:0:0,-70.14,-750.695	0/0:98:97,1:97:3480:1:36:0,-25.9027,-309.813	0/1:13:4,9:4:144:9:320:-25.229,0,-9.40023	0/0:164:163,1:163:5845:1:36:0,-45.7706,-522.56	0/0:42:41,1:41:1472:1:36:0,-9.04498,-129.178	0/0:215:215,0:215:7705:0:0:0,-64.7214,-693.481	0/0:128:127,1:127:4564:1:36:0,-34.9336,-407.326	0/0:67:67,0:67:2396:0:0:0,-20.169,-215.897	0/1:124:57,67:57:2048:67:2404:-179.289,0,-147.264	0/0:194:194,0:194:6957:0:0:0,-58.3998,-626.192	0/1:228:122,106:122:4384:106:3812:-274.641,0,-326.097	0/0:192:192,0:192:6877:0:0:0,-57.7978,-618.996	0/1:237:130,106:130:4661:106:3800:-270.794,0,-348.246	0/0:267:267,0:267:9563:0:0:0,-80.375,-860.622	0/1:21:8,13:8:288:13:453:-34.7777,0,-19.9458	0/1:219:127,92:127:4537:92:3312:-232.371,0,-342.571	0/1:49:25,24:25:900:24:845:-61.6175,0,-66.5705	0/1:28:18,10:18:644:10:360:-24.3155,0,-49.8618	0/1:196:92,104:92:3292:104:3709:-275.01,0,-237.498	0/0:90:89,1:89:3192:1:36:0,-23.4944,-283.905	0/1:33:14,19:14:504:19:680:-51.5952,0,-35.7641	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:73:73,0:73:2620:0:0:0,-21.9752,-236.047	0/1:118:61,57:61:2196:57:2044:-148.71,0,-162.384	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:214:214,0:214:7680:0:0:0,-64.4204,-691.232	0/0:271:269,2:269:9632:2:72:0,-74.7424,-859.996	0/0:86:80,6:80:2880:6:216:0,-6.09807,-239.645	0/1:149:70,78:70:2508:78:2800:-207.327,0,-181.06	0/1:213:113,100:113:4036:100:3588:-259.007,0,-299.31	0/0:127:127,0:127:4525:0:0:0,-38.2308,-407.418	0/1:43:20,23:20:720:23:828:-61.8998,0,-52.1845	0/0:99:99,0:99:3540:0:0:0,-29.802,-318.809	0/1:81:54,27:54:1944:27:968:-63.0539,0,-150.853	0/1:46:27,19:27:968:19:684:-48.0429,0,-73.59	0/0:100:100,0:100:3584:0:0:0,-30.103,-322.767	0/0:91:91,0:91:3260:0:0:0,-27.3937,-293.621	0/1:131:57,74:57:2036:74:2644:-198.769,0,-144.077	0/0:257:257,0:257:9228:0:0:0,-77.3647,-830.485	0/0:133:133,0:133:4757:0:0:0,-40.037,-428.286	0/1:173:81,92:81:2900:92:3294:-244.601,0,-209.158	0/1:14:5,9:5:180:9:320:-24.9279,0,-12.3376	0/0:172:171,1:171:6128:1:36:0,-48.1789,-548.021	0/1:213:119,94:119:4284:94:3380:-240.29,0,-321.616	0/0:412:412,0:412:14800:0:0:0,-124.024,-1331.64	0/0:139:139,0:139:4992:0:0:0,-41.8432,-449.426	0/1:93:54,39:54:1936:39:1384:-96.8337,0,-146.521	0/0:112:112,0:112:4017:0:0:0,-33.7154,-361.716	0/0:161:160,1:160:5728:1:36:0,-44.8676,-511.969	0/1:59:33,26:33:1188:26:936:-66.7987,0,-89.4678	0/0:71:71,0:71:2544:0:0:0,-21.3731,-229.211	0/1:73:31,42:31:1116:42:1484:-111.857,0,-78.7765	0/1:82:45,37:45:1616:37:1324:-94.7776,0,-121.046	0/1:133:68,65:68:2432:65:2332:-170.096,0,-179.099	0/1:67:22,45:22:780:45:1601:-124.21,0,-50.354	0/0:212:211,0:211:7572:0:0:0,-63.5173,-681.152	0/0:127:127,0:127:4560:0:0:0,-38.2308,-410.563
chr12	25339736	.	G	A	364101	PASS	AB=0.49838;ABP=3.21428;AC=140;AF=0.744681;AN=188;AO=13606;CIGAR=1X;DP=18131;DPB=18131;DPRA=0;EPP=29539.4;EPPR=9774.64;GTI=0;LEN=1;MEANALT=1.18085;MQM=59.979;MQMR=59.9927;NS=94;NUMALT=1;ODDS=14.4778;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=481995;QR=154976;RO=4504;RPL=6364;RPP=126.041;RPPR=52.3795;RPR=7242;RUN=1;SAF=6363;SAP=126.602;SAR=7243;SRF=2413;SRP=52.9985;SRR=2091;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:61:0,61:0:0:61:2145:-193.314,-18.3628,0	1/1:277:0,277:0:0:277:9816:-883.392,-83.3853,0	0/1:236:115,121:115:4002:121:4311:-317.125,0,-289.329	0/1:410:205,205:205:7027:205:7326:-535.968,0,-509.091	0/1:123:62,61:62:2119:61:2152:-156.919,0,-153.946	0/1:119:51,68:51:1769:68:2413:-181.603,0,-123.666	1/1:323:1,322:1:36:322:11469:-1028.49,-93.6344,0	0/1:290:150,140:150:5250:140:4905:-354.306,0,-385.344	0/1:180:100,78:100:3468:78:2724:-191.517,0,-258.447	1/1:188:0,188:0:0:188:6591:-592.257,-56.5936,0	0/1:188:82,106:82:2750:106:3730:-279.307,0,-191.149	0/1:188:86,102:86:2907:102:3602:-267.687,0,-205.273	0/1:182:93,87:93:3207:87:3095:-224.307,0,-234.388	0/1:169:82,87:82:2720:87:3044:-223.316,0,-194.168	1/1:197:0,197:0:0:197:6993:-629.438,-59.3029,0	0/1:135:63,72:63:2106:72:2537:-187.94,0,-149.165	1/1:168:0,168:0:0:168:5958:-536.332,-50.573,0	0/1:151:74,77:74:2525:77:2723:-199.856,0,-182.048	1/1:160:0,160:0:0:160:5658:-509.343,-48.1648,0	1/1:329:1,328:1:32:328:11630:-1043.25,-95.8396,0	0/1:279:126,153:126:4445:153:5418:-403.764,0,-316.236	1/1:119:0,119:0:0:119:4240:-381.774,-35.8226,0	1/1:167:0,167:0:0:167:5895:-530.664,-50.272,0	0/1:223:137,85:137:4761:85:3009:-203.942,0,-361.555	1/1:155:0,154:0:0:154:5458:-490.989,-46.3586,0	0/1:596:278,315:278:9637:315:11162:-825.607,0,-688.433	1/1:526:1,525:1:36:525:18649:-1674.4,-154.744,0	1/1:90:0,90:0:0:90:3201:-288.313,-27.0927,0	0/1:499:265,234:265:9189:234:8339:-600.304,0,-676.794	0/1:153:77,76:77:2688:76:2697:-196.916,0,-196.106	0/1:221:121,100:121:4245:100:3536:-251.923,0,-315.703	0/1:21:10,11:10:351:11:392:-29.2984,0,-25.605	1/1:18:0,18:0:0:18:636:-57.5675,-5.41854,0	1/1:17:0,17:0:0:17:608:-55.052,-5.11751,0	0/1:26:14,12:14:491:12:432:-31.3944,0,-36.6943	0/1:24:8,16:8:284:16:576:-44.9503,0,-18.6786	0/1:434:207,226:207:7041:226:7972:-586.878,0,-503.151	1/1:225:0,225:0:0:225:7977:-717.958,-67.7318,0	1/1:229:0,229:0:0:229:8103:-729.293,-68.9359,0	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	1/1:262:0,262:0:0:262:9229:-830.59,-78.8699,0	1/1:115:1,114:1:32:114:4009:-357.802,-31.4191,0	1/1:221:2,219:2:72:219:7771:-692.586,-59.6909,0	1/1:196:0,196:0:0:196:6919:-622.785,-59.0019,0	1/1:166:0,166:0:0:166:5884:-529.675,-49.971,0	0/1:173:74,99:74:2530:99:3547:-267.359,0,-175.867	1/1:235:0,234:0:0:234:8279:-744.684,-70.441,0	0/1:321:153,168:153:5253:168:5978:-441.497,0,-376.286	1/1:195:0,195:0:0:195:6917:-622.598,-58.7009,0	0/1:245:121,124:121:4168:124:4404:-322.781,0,-301.554	1/1:199:0,198:0:0:198:6994:-629.122,-59.6039,0	0/1:21:5,16:5:180:16:568:-45.1302,0,-10.2304	0/1:191:113,78:113:3880:78:2768:-191.863,0,-291.896	0/1:109:50,59:50:1718:59:2096:-156.098,0,-122.086	0/1:42:28,14:28:954:14:496:-32.331,0,-73.5222	0/1:228:123,104:123:4233:104:3705:-265.034,0,-312.538	1/1:118:1,117:1:36:117:4154:-370.444,-31.9233,0	0/1:35:12,23:12:428:23:824:-63.9473,0,-28.3228	1/1:34:0,34:0:0:34:1216:-109.747,-10.235,0	1/1:207:2,205:2:63:205:7298:-650.89,-56.3301,0	0/1:244:108,134:108:3659:134:4749:-354.512,0,-256.463	1/1:13:0,13:0:0:13:468:-42.4596,-3.91339,0	1/1:316:0,316:0:0:316:11223:-1009.96,-95.1255,0	1/1:256:3,253:3:108:253:8971:-797.302,-66.9885,0	1/1:126:7,119:7:252:119:4238:-358.572,-14.9008,0	0/1:150:86,63:86:2992:63:2232:-155.978,0,-224.346	0/1:310:147,162:147:5086:162:5770:-426.039,0,-364.481	1/1:154:3,151:3:95:151:5359:-473.58,-37.4944,0	0/1:95:45,50:45:1537:50:1780:-131.885,0,-110.021	1/1:161:0,161:0:0:161:5658:-509.304,-48.4658,0	0/1:246:131,114:131:4472:114:4017:-287.699,0,-328.635	0/1:36:23,13:23:783:13:468:-31.6226,0,-59.9445	1/1:163:0,163:0:0:163:5800:-522.115,-49.0679,0	1/1:126:0,126:0:0:126:4439:-399.682,-37.9298,0	0/1:339:201,138:201:6993:138:4883:-337.577,0,-527.397	1/1:316:0,316:0:0:316:11250:-1012.39,-95.1255,0	1/1:195:0,195:0:0:195:6905:-621.523,-58.7009,0	0/1:147:69,78:69:2412:78:2767:-205.019,0,-173.08	0/1:39:20,19:20:716:19:658:-47.8008,0,-53.0275	1/1:230:0,230:0:0:230:8105:-729.472,-69.2369,0	0/1:203:106,96:106:3637:96:3424:-247.316,0,-266.481	1/1:462:0,462:0:0:462:16361:-1472.16,-139.076,0	1/1:218:2,216:2:72:216:7644:-681.161,-58.7878,0	0/1:167:82,84:82:2794:84:2992:-219.281,0,-201.471	1/1:247:1,246:1:36:246:8650:-774.907,-70.7561,0	1/1:344:0,344:0:0:344:12147:-1093.09,-103.554,0	0/1:89:36,53:36:1248:53:1878:-142.506,0,-85.8272	1/1:197:2,195:2:72:195:6860:-610.606,-52.4662,0	0/1:160:81,79:81:2700:79:2812:-205.153,0,-195.082	0/1:117:51,66:51:1743:66:2335:-175.185,0,-121.93	0/1:235:103,131:103:3423:131:4576:-341.295,0,-237.577	0/1:150:93,57:93:3157:57:2025:-137.367,0,-239.202	1/1:174:0,174:0:0:174:6183:-556.57,-52.3792,0	1/1:283:4,279:4:140:279:9902:-878.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chr12	25339738	.	C	T	100772	PASS	AB=0.498492;ABP=3.18711;AC=48;AF=0.255319;AN=188;AO=4486;CIGAR=1X;DP=18123;DPB=18123;DPRA=1.06574;EPP=9744.24;EPPR=29543.7;GTI=0;LEN=1;MEANALT=1.22951;MQM=59.9817;MQMR=59.9868;NS=94;NUMALT=1;ODDS=14.9496;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=158498;QR=480077;RO=13608;RPL=2408;RPP=55.7239;RPPR=50.5816;RPR=2078;RUN=1;SAF=2408;SAP=55.7239;SAR=2078;SRF=6530;SRP=50.9308;SRR=7078;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:64:64,0:64:2221:0:0:0,-19.2659,-200.152	0/0:278:277,0:277:9779:0:0:0,-83.3853,-879.706	0/1:228:118,110:118:4140:110:3911:-283.548,0,-304.15	0/1:417:211,206:211:7473:206:7318:-533.147,0,-547.091	0/1:124:62,62:62:2167:62:2177:-158.866,0,-157.964	0/1:122:71,51:71:2504:51:1794:-125.016,0,-188.886	0/0:324:323,1:323:11447:1:27:0,-94.8339,-1027.42	0/1:307:152,155:152:5341:155:5435:-396.869,0,-388.412	0/1:183:77,105:77:2723:105:3706:-278.686,0,-190.253	0/0:183:181,1:181:6458:1:36:0,-51.549,-577.709	0/1:187:102,85:102:3590:85:2992:-213.22,0,-267.013	0/1:181:97,84:97:3431:84:2944:-210.708,0,-254.414	0/1:178:90,88:90:3163:88:3090:-224.745,0,-231.313	0/1:166:86,80:86:2982:80:2840:-205.869,0,-218.642	0/0:196:196,0:196:6865:0:0:0,-59.0019,-617.932	0/1:134:71,63:71:2471:63:2222:-159.906,0,-182.301	0/0:170:169,0:169:5918:0:0:0,-50.8741,-532.459	0/1:150:77,73:77:2708:73:2593:-188.465,0,-198.809	0/0:165:164,0:164:5774:0:0:0,-49.3689,-519.5	0/0:325:324,0:324:11446:0:0:0,-97.5337,-1029.76	0/1:278:146,131:146:5174:131:4618:-332.072,0,-382.087	0/0:119:119,0:119:4230:0:0:0,-35.8226,-380.877	0/0:170:169,0:169:5992:0:0:0,-50.8741,-539.177	0/1:225:87,138:87:3116:138:4920:-375.214,0,-212.935	0/0:152:152,0:152:5341:0:0:0,-45.7566,-480.826	0/1:593:313,280:313:11106:280:9937:-715.765,0,-820.928	0/0:530:528,1:528:18584:1:36:0,-155.951,-1668.62	0/0:90:90,0:90:3178:0:0:0,-27.0927,-286.243	0/1:499:229,269:229:8132:269:9586:-712.422,0,-581.627	0/1:158:76,82:76:2684:82:2902:-213.537,0,-194.242	0/1:223:106,117:106:3776:117:4137:-305.386,0,-272.911	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/0:18:18,0:18:644:0:0:0,-5.41854,-58.2906	0/1:26:12,14:12:428:14:496:-37.1475,0,-31.032	0/1:23:16,7:16:561:7:248:-15.7405,0,-43.8934	0/1:431:224,206:224:7836:206:7222:-520.243,0,-575.476	0/0:225:225,0:225:7958:0:0:0,-67.7317,-716.248	0/0:228:227,1:227:7985:1:36:0,-65.0366,-715.086	0/1:13:8,5:8:288:5:180:-12.6387,0,-22.354	0/0:263:263,0:263:9305:0:0:0,-79.1709,-837.426	0/0:117:115,1:115:4043:1:36:0,-31.6061,-360.535	0/0:218:217,1:217:7702:1:36:0,-62.0263,-689.621	0/0:198:197,0:197:6923:0:0:0,-59.3029,-622.789	0/0:164:164,0:164:5711:0:0:0,-49.3689,-514.122	0/1:176:100,76:100:3521:76:2699:-190.17,0,-264.119	0/0:240:240,0:240:8380:0:0:0,-72.2472,-754.183	0/1:317:162,153:162:5738:153:5385:-389.602,0,-421.354	0/0:199:198,0:198:6981:0:0:0,-59.6039,-628.151	0/1:247:124,122:124:4389:122:4307:-313.397,0,-320.771	0/0:192:192,0:192:6823:0:0:0,-57.7978,-614.143	0/1:20:15,5:15:540:5:180:-10.5315,0,-42.9159	0/1:191:79,112:79:2800:112:3981:-300.979,0,-194.742	0/1:110:59,51:59:2079:51:1828:-131.688,0,-154.264	0/1:42:15,27:15:536:27:968:-74.7941,0,-35.9316	0/1:228:106,121:106:3772:121:4252:-314.167,0,-270.985	0/0:119:117,1:117:4117:1:36:0,-32.2831,-367.116	0/1:36:24,12:24:856:12:432:-28.3841,0,-66.524	0/0:32:32,0:32:1131:0:0:0,-9.63296,-102.098	0/0:203:202,1:202:7167:1:36:0,-57.5108,-641.491	0/1:243:129,114:129:4544:114:3997:-286.773,0,-335.975	0/0:14:14,0:14:500:0:0:0,-4.21442,-45.3362	0/0:311:311,0:311:11026:0:0:0,-93.6203,-992.239	0/0:259:257,2:257:9111:2:72:0,-71.13,-813.135	0/0:129:123,6:123:4360:6:208:0,-19.7738,-373.515	0/1:147:65,82:65:2299:82:2883:-215.453,0,-162.917	0/1:299:161,138:161:5696:138:4896:-350.786,0,-422.754	0/0:156:152,4:152:5376:4:129:0,-35.033,-472.044	0/1:99:53,46:53:1861:46:1604:-114.845,0,-137.963	0/0:157:154,0:154:5425:0:0:0,-46.3586,-488.036	0/1:243:118,125:118:4152:125:4395:-322.579,0,-300.715	0/1:38:14,24:14:496:24:837:-64.2065,0,-33.5351	0/0:165:165,0:165:5859:0:0:0,-49.6699,-527.424	0/0:125:125,0:125:4480:0:0:0,-37.6287,-403.369	0/1:340:140,200:140:4936:200:7122:-538.69,0,-342.043	0/0:320:318,1:318:11301:1:36:0,-92.7502,-1013.42	0/0:193:193,0:193:6858:0:0:0,-58.0988,-617.292	0/1:150:84,66:84:2990:66:2322:-164.083,0,-224.177	0/1:41:21,20:21:740:20:704:-51.3423,0,-54.5811	0/0:237:237,0:237:8386:0:0:0,-71.3441,-754.756	0/1:205:98,107:98:3458:107:3789:-279.496,0,-249.722	0/0:463:461,0:461:16319:0:0:0,-138.775,-1468.09	0/0:220:220,0:220:7731:0:0:0,-66.2266,-695.821	0/1:169:86,83:86:2985:83:2904:-210.721,0,-218.008	0/0:243:242,0:242:8446:0:0:0,-72.8493,-759.875	0/0:334:333,0:333:11693:0:0:0,-100.243,-1051.99	0/1:90:49,41:49:1689:41:1443:-103.072,0,-125.201	0/0:189:188,0:188:6485:0:0:0,-56.5936,-583.535	0/1:157:82,75:82:2897:75:2632:-189.865,0,-213.705	0/1:119:66,53:66:2314:53:1872:-132.934,0,-172.67	0/1:239:136,103:136:4693:103:3642:-256.041,0,-350.584	0/1:142:55,87:55:1939:87:3036:-230.726,0,-132.04	0/0:173:173,0:173:6043:0:0:0,-52.0782,-543.985	0/0:282:279,2:279:9857:2:72: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chr12	25382254	.	T	C	135484	PASS	AB=0.468106;ABP=48.0273;AC=140;AF=0.744681;AN=188;AO=6596;CIGAR=1X;DP=9326;DPB=9326;DPRA=0;EPP=14326;EPPR=5879.09;GTI=1;LEN=1;MEANALT=1.04255;MQM=53.7492;MQMR=59.9043;NS=94;NUMALT=1;ODDS=2.51243;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=235761;QR=97740;RO=2726;RPL=0;RPP=14326;RPPR=5879.09;RPR=6596;RUN=1;SAF=6596;SAP=14326;SAR=0;SRF=2726;SRP=5922.44;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:43:0,43:0:0:43:1535:-137.405,-12.9443,0	1/1:86:0,86:0:0:86:3065:-273.851,-25.8886,0	0/1:194:119,75:119:4272:75:2692:-182.922,0,-326.257	0/1:263:133,130:133:4772:130:4672:-340.099,0,-350.449	0/1:75:39,36:39:1395:36:1279:-92.4102,0,-103.271	0/1:39:21,18:21:756:18:644:-46.3654,0,-56.6189	1/1:88:0,88:0:0:88:3115:-280.234,-26.4906,0	0/1:234:130,104:130:4655:104:3724:-262.008,0,-348.393	0/1:82:37,45:37:1311:45:1620:-120.627,0,-92.9778	1/1:71:0,71:0:0:71:2512:-225.84,-21.3731,0	0/1:89:45,44:45:1616:44:1584:-115.662,0,-118.936	0/1:125:68,57:68:2448:57:2044:-145.064,0,-182.946	0/1:87:46,41:46:1656:41:1472:-106.047,0,-123.121	0/1:59:27,32:27:968:32:1144:-85.1828,0,-69.6766	1/1:90:0,90:0:0:90:3228:-290.162,-27.0927,0	0/1:130:56,74:56:2012:74:2643:-197.964,0,-142.215	1/1:35:0,35:0:0:35:1260:-113.238,-10.5361,0	0/1:35:21,14:21:756:14:485:-33.0491,0,-57.8312	1/1:41:0,41:0:0:41:1472:-131.668,-12.3422,0	1/1:121:0,121:0:0:121:4309:-387.305,-36.4246,0	0/1:189:119,70:119:4239:70:2497:-166.484,0,-324.78	1/1:125:1,124:1:36:124:4456:-397.133,-34.0305,0	1/1:131:0,131:0:0:131:4685:-420.958,-39.4349,0	0/1:49:22,27:22:792:27:972:-72.9087,0,-56.8552	1/1:58:1,57:1:36:57:2035:-179.066,-13.8615,0	0/1:218:116,102:116:4160:102:3647:-262.561,0,-308.938	1/1:273:0,272:0:0:272:9739:-873.235,-81.8802,0	1/1:27:0,27:0:0:27:947:-85.3944,-8.12781,0	0/1:313:178,135:178:6396:135:4830:-340.452,0,-481.503	0/1:139:86,53:86:3071:53:1908:-129.702,0,-234.767	0/1:87:42,45:42:1497:45:1596:-117.507,0,-108.833	0/1:27:17,10:17:608:10:360:-24.5537,0,-46.9242	1/1:32:0,32:0:0:32:1140:-102.507,-9.63296,0	1/1:12:0,12:0:0:12:432:-39.117,-3.61236,0	0/1:39:22,17:22:784:17:608:-43.1774,0,-59.1437	0/1:51:26,25:26:936:25:881:-64.0617,0,-69.2069	0/1:208:83,125:83:2979:125:4484:-340.535,0,-205.727	1/1:131:0,130:0:0:130:4633:-415.594,-39.1339,0	1/1:54:0,54:0:0:54:1940:-172.662,-16.2556,0	0/1:12:9,3:9:324:3:108:-6.07001,0,-25.8935	1/1:91:0,91:0:0:91:3252:-292.022,-27.3937,0	1/1:35:0,35:0:0:35:1260:-112.33,-10.5361,0	1/1:141:0,141:0:0:141:5048:-452.77,-42.4452,0	1/1:50:0,50:0:0:50:1796:-161.234,-15.0515,0	1/1:75:0,75:0:0:75:2667:-239.791,-22.5773,0	0/1:124:77,47:77:2756:47:1684:-114.203,0,-210.953	1/1:133:0,133:0:0:133:4755:-426.416,-40.037,0	0/1:225:112,113:112:4015:113:4044:-295.065,0,-293.798	1/1:99:1,98:1:36:98:3512:-311.692,-26.2037,0	0/1:133:71,62:71:2544:62:2232:-160.459,0,-189.172	1/1:84:0,84:0:0:84:3001:-270.079,-25.2865,0	0/1:20:14,6:14:504:6:216:-13.7556,0,-39.6729	0/1:105:52,53:52:1868:53:1904:-139.548,0,-136.791	0/1:38:19,19:19:665:19:661:-48.2782,0,-48.7336	0/1:17:12,5:12:432:5:180:-11.3929,0,-34.1037	0/1:180:87,93:87:3124:93:3318:-243.053,0,-227.2	1/1:69:1,68:1:36:68:2411:-213.266,-17.1728,0	0/1:36:11,25:11:396:25:900:-70.4598,0,-25.1457	1/1:5:0,5:0:0:5:176:-16.1143,-1.50515,0	1/1:125:0,125:0:0:125:4454:-399.259,-37.6288,0	0/1:112:55,57:55:1976:57:2052:-150.71,0,-144.397	1/1:19:0,19:0:0:19:680:-61.3995,-5.71957,0	1/1:152:0,152:0:0:152:5422:-486.117,-45.7566,0	1/1:153:1,152:1:36:152:5438:-485.281,-42.4593,0	1/1:65:4,61:4:144:61:2192:-183.938,-6.25333,0	0/1:106:48,58:48:1728:58:2072:-154.619,0,-123.896	0/1:164:85,79:85:3044:79:2820:-203.958,0,-224.821	1/1:149:7,142:7:252:142:5104:-435.115,-21.8269,0	0/1:49:29,20:29:1040:20:712:-49.435,0,-79.1639	1/1:81:0,81:0:0:81:2881:-258.424,-24.3834,0	0/1:54:28,26:28:1000:26:923:-67.1014,0,-74.0598	0/1:12:9,3:9:320:3:108:-6.43197,0,-25.53	1/1:168:0,168:0:0:168:5969:-533.846,-50.573,0	1/1:74:0,74:0:0:74:2619:-235.141,-22.2762,0	0/1:156:89,66:89:3191:66:2355:-163.528,0,-240.371	1/1:135:0,134:0:0:134:4774:-428.848,-40.338,0	1/1:164:0,164:0:0:164:5846:-524.077,-49.3689,0	0/1:130:69,61:69:2480:61:2192:-156.993,0,-184.129	0/1:39:23,16:23:828:16:576:-39.3914,0,-63.1039	1/1:111:0,111:0:0:111:3957:-355.636,-33.4143,0	0/1:168:85,83:85:3039:83:2969:-215.666,0,-223.163	1/1:110:0,110:0:0:110:3944:-353.846,-33.1133,0	1/1:70:0,70:0:0:70:2516:-226.245,-21.0721,0	0/1:70:32,38:32:1148:38:1360:-101.275,0,-82.5577	1/1:43:0,43:0:0:43:1548:-139.216,-12.9443,0	1/1:134:1,133:1:36:133:4752:-422.409,-36.7397,0	0/1:24:12,12:12:432:12:432:-31.8775,0,-31.9965	1/1:88:0,88:0:0:88:3144:-281.745,-26.4906,0	0/1:98:50,48:50:1800:48:1719:-124.507,0,-132.781	0/1:59:32,27:32:1152:27:964:-68.8909,0,-86.2294	0/1:139:80,59:80:2876:59:2102:-146.833,0,-216.743	0/1:93:66,27:66:2367:27:955:-58.208,0,-185.292	1/1:83:0,83:0:0:83:2968:-266.912,-24.9855,0	1/1:107:0,107:0:0:107:3828:-344.442,-32.2102,0
chr12	25382264	.	C	T	134067	PASS	AB=0.469567;ABP=43.3219;AC=140;AF=0.744681;AN=188;AO=6513;CIGAR=1X;DP=9189;DPB=9189;DPRA=0;EPP=14145.8;EPPR=5637.11;GTI=1;LEN=1;MEANALT=1.02128;MQM=53.7468;MQMR=59.9237;NS=94;NUMALT=1;ODDS=2.01459;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=233079;QR=95381;RO=2674;RPL=0;RPP=14145.8;RPPR=5645.67;RPR=6513;RUN=1;SAF=6513;SAP=14145.8;SAR=0;SRF=2673;SRP=5800.84;SRR=1;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:43:0,43:0:0:43:1544:-138.212,-12.9443,0	1/1:88:0,88:0:0:88:3156:-281.932,-26.4906,0	0/1:190:116,74:116:4143:74:2656:-180.896,0,-315.858	0/1:263:135,128:135:4801:128:4583:-332.395,0,-353.06	0/1:76:40,36:40:1428:36:1296:-93.615,0,-105.938	0/1:39:21,18:21:756:18:648:-46.7218,0,-56.6189	1/1:87:0,87:0:0:87:3097:-278.54,-26.1896,0	0/1:229:127,102:127:4486:102:3656:-257.269,0,-334.709	0/1:82:36,45:36:1283:45:1611:-119.928,0,-91.1512	1/1:69:0,69:0:0:69:2454:-220.671,-20.7711,0	0/1:86:43,43:43:1536:43:1539:-112.604,0,-112.644	0/1:122:65,57:65:2300:57:2043:-145.849,0,-170.534	0/1:84:43,41:43:1536:41:1472:-106.95,0,-113.229	0/1:59:27,32:27:968:32:1152:-85.8279,0,-69.6766	1/1:89:0,89:0:0:89:3187:-286.473,-26.7917,0	0/1:129:54,75:54:1927:75:2684:-201.878,0,-134.873	1/1:36:0,36:0:0:36:1284:-115.5,-10.8371,0	0/1:36:20,15:20:716:15:527:-36.259,0,-53.8719	1/1:41:0,41:0:0:41:1472:-131.652,-12.3422,0	1/1:114:0,114:0:0:114:4083:-366.921,-34.3174,0	0/1:181:114,67:114:4043:67:2403:-160.517,0,-309.565	1/1:123:1,122:1:36:122:4361:-388.666,-33.4284,0	1/1:127:0,127:0:0:127:4548:-408.709,-38.2308,0	0/1:50:23,27:23:824:27:972:-72.6077,0,-59.4318	1/1:58:1,57:1:36:57:2032:-178.659,-13.8615,0	0/1:214:115,99:115:4116:99:3560:-255.819,0,-306.185	1/1:271:0,271:0:0:271:9668:-867.382,-81.5791,0	1/1:27:0,27:0:0:27:972:-87.5303,-8.12781,0	0/1:306:172,134:172:6151:134:4797:-339.534,0,-461.573	0/1:135:85,50:85:3026:50:1792:-120.501,0,-231.923	0/1:86:41,45:41:1472:45:1612:-119.238,0,-106.888	0/1:27:17,10:17:608:10:345:-23.1947,0,-46.9242	1/1:31:0,31:0:0:31:1104:-99.4017,-9.33193,0	1/1:12:0,12:0:0:12:424:-38.402,-3.61236,0	0/1:39:22,17:22:775:17:612:-43.5339,0,-58.331	0/1:52:27,25:27:964:25:892:-64.7515,0,-71.4233	0/1:207:83,124:83:2963:124:4445:-337.424,0,-204.59	1/1:130:0,130:0:0:130:4657:-418.193,-39.1339,0	1/1:52:0,52:0:0:52:1864:-166.108,-15.6536,0	0/1:12:9,3:9:324:3:108:-6.07001,0,-25.8935	1/1:88:0,88:0:0:88:3137:-282.013,-26.4906,0	1/1:36:0,36:0:0:36:1271:-113.812,-10.8371,0	1/1:138:0,138:0:0:138:4939:-442.791,-41.5421,0	1/1:50:0,50:0:0:50:1796:-161.234,-15.0515,0	1/1:72:0,72:0:0:72:2575:-231.539,-21.6742,0	0/1:123:76,47:76:2712:47:1665:-112.927,0,-207.296	1/1:132:0,132:0:0:132:4728:-423.696,-39.736,0	0/1:218:108,110:108:3827:110:3929:-286.998,0,-279.002	1/1:101:1,100:1:36:100:3563:-316.418,-26.8058,0	0/1:132:70,62:70:2499:62:2216:-159.449,0,-185.422	1/1:83:0,83:0:0:83:2955:-265.946,-24.9855,0	0/1:20:14,6:14:500:6:216:-13.7556,0,-39.3109	0/1:103:51,52:51:1806:52:1855:-135.775,0,-131.814	0/1:39:20,19:20:704:19:684:-50.0207,0,-51.9444	0/1:17:12,5:12:432:5:180:-11.3929,0,-34.1037	0/1:177:85,92:85:3035:92:3307:-242.89,0,-220.098	1/1:69:1,68:1:36:68:2435:-215.341,-17.1728,0	0/1:35:10,25:10:360:25:900:-70.7608,0,-22.2083	1/1:5:0,5:0:0:5:180:-16.4764,-1.50515,0	1/1:126:0,126:0:0:126:4478:-401.318,-37.9298,0	0/1:113:56,57:56:1996:57:2052:-150.409,0,-145.895	1/1:19:0,19:0:0:19:684:-61.7592,-5.71957,0	1/1:151:0,151:0:0:151:5411:-484.643,-45.4555,0	1/1:149:1,148:1:36:148:5297:-472.648,-41.2552,0	1/1:65:5,60:5:180:60:2147:-176.648,-3.01489,0	0/1:105:49,56:49:1756:56:2004:-148.803,0,-126.716	0/1:158:82,76:82:2919:76:2717:-196.739,0,-215.383	1/1:147:6,141:6:216:141:5059:-434.163,-24.4609,0	0/1:49:27,22:27:963:22:784:-55.6167,0,-72.2355	1/1:78:0,78:0:0:78:2784:-249.725,-23.4803,0	0/1:51:27,24:27:964:24:864:-62.7082,0,-71.7243	0/1:12:9,3:9:324:3:108:-6.43197,0,-25.8935	1/1:164:0,164:0:0:164:5884:-526.085,-49.3689,0	1/1:71:0,71:0:0:71:2544:-228.184,-21.3731,0	0/1:151:85,66:85:3040:66:2349:-164.681,0,-228.351	1/1:137:0,137:0:0:137:4889:-439.267,-41.2411,0	1/1:161:0,161:0:0:161:5772:-517.776,-48.4658,0	0/1:130:70,60:70:2504:60:2152:-153.415,0,-186.289	0/1:39:23,16:23:807:16:572:-39.0381,0,-61.209	1/1:108:0,108:0:0:108:3872:-347.11,-32.5112,0	0/1:162:80,82:80:2859:82:2952:-215.944,0,-208.777	1/1:108:0,108:0:0:108:3863:-346.769,-32.5112,0	1/1:68:0,68:0:0:68:2446:-219.992,-20.47,0	0/1:67:30,37:30:1080:37:1328:-99.5657,0,-77.3442	1/1:44:0,44:0:0:44:1584:-142.385,-13.2453,0	1/1:132:1,131:1:36:131:4668:-414.952,-36.1377,0	0/1:23:12,11:12:428:11:396:-28.9482,0,-31.9351	1/1:89:1,88:1:36:88:3139:-277.67,-23.1934,0	0/1:98:50,48:50:1796:48:1724:-124.916,0,-132.421	0/1:57:31,26:31:1116:26:932:-66.6258,0,-83.593	0/1:135:77,58:77:2760:58:2074:-145.451,0,-207.732	0/1:93:67,26:67:2400:26:932:-56.139,0,-188.261	1/1:83:0,83:0:0:83:2967:-266.821,-24.9855,0	1/1:106:0,106:0:0:106:3808:-342.643,-31.9092,0
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chr12	25447101	.	G	C	153898	PASS	AB=0.536138;ABP=62.3351;AC=140;AF=0.744681;AN=188;AO=8051;CIGAR=1X;DP=10493;DPB=10493;DPRA=0;EPP=17476.8;EPPR=4936.37;GTI=1;LEN=1;MEANALT=1.05319;MQM=38.5317;MQMR=59.913;NS=94;NUMALT=1;ODDS=6.76085;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=287139;QR=86874;RO=2437;RPL=8051;RPP=17485.5;RPPR=4936.37;RPR=0;RUN=1;SAF=1;SAP=17476.8;SAR=8050;SRF=0;SRP=5294.89;SRR=2437;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:45:1,44:1:36:44:1558:-124.923,-9.94979,0	1/1:160:2,158:2:72:158:5611:-453.896,-41.3517,0	0/1:122:44,78:44:1572:78:2758:-189.271,0,-105.046	0/1:256:127,128:127:4510:128:4581:-318.235,0,-328.96	0/1:82:35,47:35:1248:47:1648:-115.231,0,-87.9404	0/1:100:45,54:45:1603:54:1924:-129.039,0,-114.398	1/1:196:0,196:0:0:196:7025:-603.724,-59.0019,0	0/1:221:104,117:104:3684:117:4192:-274.977,0,-265.219	0/1:94:45,49:45:1594:49:1752:-116.824,0,-115.45	1/1:126:0,126:0:0:126:4508:-388.262,-37.9298,0	0/1:76:31,45:31:1103:45:1604:-116.123,0,-76.7015	0/1:72:41,31:41:1472:31:1093:-68.4891,0,-111.102	0/1:78:34,44:34:1212:44:1571:-105.019,0,-85.906	0/1:66:24,42:24:845:42:1504:-106.789,0,-56.4991	1/1:63:1,62:1:36:62:2202:-184.998,-15.3666,0	0/1:46:22,24:22:792:24:852:-57.5545,0,-57.7583	1/1:81:0,81:0:0:81:2904:-237.068,-24.3834,0	0/1:51:29,22:29:1032:22:778:-47.6296,0,-77.8409	1/1:57:0,57:0:0:57:2040:-165.136,-17.1587,0	1/1:262:0,262:0:0:262:9347:-805.648,-78.8699,0	0/1:217:101,116:101:3590:116:4106:-279.265,0,-257.613	1/1:100:0,100:0:0:100:3564:-310.849,-30.103,0	1/1:122:0,122:0:0:122:4372:-376.082,-36.7257,0	0/1:138:51,87:51:1819:87:3107:-221.312,0,-122.444	1/1:98:0,98:0:0:98:3504:-294.261,-29.5009,0	0/1:386:163,223:163:5806:223:7940:-577.79,0,-406.458	1/1:242:1,241:1:36:241:8629:-721.587,-69.4617,0	1/1:33:0,33:0:0:33:1184:-100.985,-9.93399,0	0/1:349:155,194:155:5509:194:6933:-497.851,0,-390.879	0/1:165:85,80:85:3060:80:2813:-190.02,0,-225.828	0/1:152:65,87:65:2318:87:3090:-220.742,0,-163.118	0/1:14:5,9:5:180:9:324:-23.5639,0,-12.3376	1/1:26:0,26:0:0:26:902:-76.9124,-7.82678,0	1/1:8:0,8:0:0:8:288:-24.0829,-2.40824,0	0/1:14:7,7:7:248:7:248:-16.6758,0,-18.4498	0/1:20:9,11:9:324:11:373:-25.2006,0,-23.4853	0/1:175:87,88:87:3097:88:3148:-220.243,0,-226.276	1/1:261:0,261:0:0:261:9311:-784.885,-78.5688,0	1/1:66:0,66:0:0:66:2372:-195.221,-19.868,0	0/1:11:7,4:7:252:4:144:-9.14086,0,-19.7176	1/1:156:0,156:0:0:156:5567:-470.302,-46.9607,0	1/1:35:0,35:0:0:35:1256:-104.308,-10.5361,0	1/1:119:0,119:0:0:119:4245:-357.858,-35.8226,0	1/1:76:0,76:0:0:76:2732:-234.326,-22.8783,0	1/1:70:0,70:0:0:70:2520:-215.127,-21.0721,0	0/1:130:61,69:61:2171:69:2445:-172.963,0,-156.522	1/1:240:0,240:0:0:240:8604:-704.491,-72.2472,0	0/1:208:103,105:103:3664:105:3753:-259.412,0,-267.349	1/1:160:0,160:0:0:160:5689:-487.941,-48.1648,0	0/1:180:78,102:78:2788:102:3648:-259.926,0,-196.971	1/1:73:0,73:0:0:73:2615:-225.967,-21.9752,0	0/1:17:9,8:9:324:8:280:-19.4659,0,-24.3883	0/1:128:69,59:69:2466:59:2116:-135.263,0,-183.66	0/1:74:37,37:37:1324:37:1313:-90.5083,0,-97.1859	0/1:25:9,16:9:324:16:576:-40.2091,0,-21.9801	0/1:135:72,63:72:2575:63:2240:-147.91,0,-191.355	1/1:65:0,65:0:0:65:2282:-195.533,-19.567,0	0/1:32:9,23:9:324:23:828:-63.1796,0,-19.8729	1/1:28:0,28:0:0:28:991:-87.3177,-8.42884,0	1/1:96:0,96:0:0:96:3429:-288.733,-28.8989,0	0/1:116:53,63:53:1887:63:2241:-158.672,0,-135.184	1/1:22:0,22:0:0:22:788:-67.8835,-6.62266,0	1/1:165:0,164:0:0:164:5865:-507.628,-49.3689,0	1/1:248:1,246:1:36:246:8751:-747.6,-71.1088,0	1/1:99:3,96:3:108:96:3433:-277.021,-19.7268,0	0/1:85:47,38:47:1688:38:1356:-90.8466,0,-126.617	0/1:219:106,113:106:3791:113:4025:-277.811,0,-274.607	1/1:130:3,126:3:108:126:4488:-375.337,-29.1067,0	0/1:26:11,15:11:388:15:540:-36.4649,0,-27.4259	1/1:37:0,37:0:0:37:1328:-109.09,-11.1381,0	0/1:68:37,31:37:1313:31:1093:-75.7994,0,-97.9997	0/1:13:3,10:3:108:10:360:-26.7891,0,-6.16178	1/1:151:0,151:0:0:151:5390:-444.815,-45.4555,0	1/1:68:0,68:0:0:68:2436:-200.998,-20.47,0	0/1:263:108,155:108:3838:155:5526:-385.727,0,-266.447	1/1:137:0,137:0:0:137:4897:-421.105,-41.2411,0	1/1:193:0,193:0:0:193:6892:-562.826,-58.0988,0	0/1:104:56,48:56:2003:48:1704:-109.256,0,-149.236	0/1:14:2,12:2:72:12:417:-30.6436,0,-2.6223	1/1:108:0,108:0:0:108:3854:-326.096,-32.5112,0	0/1:117:43,74:43:1532:74:2602:-179.986,0,-102.923	1/1:318:0,318:0:0:318:11296:-971.576,-95.7275,0	1/1:111:0,111:0:0:111:3933:-336.467,-33.4143,0	0/1:43:22,21:22:792:21:756:-52.6305,0,-58.6614	1/1:80:0,80:0:0:80:2840:-243.421,-24.0824,0	1/1:158:1,157:1:36:157:5616:-478.624,-43.9645,0	0/1:59:20,39:20:711:39:1400:-97.34,0,-46.5549	1/1:77:0,77:0:0:77:2760:-225.8,-23.1793,0	0/1:73:37,36:37:1319:36:1288:-84.7019,0,-97.036	0/1:38:21,17:21:739:17:604:-39.63,0,-55.3932	0/1:80:37,43:37:1328:43:1535:-105.139,0,-95.7398	0/1:78:58,20:58:2067:20:720:-37.72,0,-162.82	1/1:7:0,7:0:0:7:248:-20.6594,-2.10721,0	1/1:90:0,90:0:0:90:3224:-274.961,-27.0927,0
chr12	25447110	.	CGGGAGCAGGA	CA	128493	PASS	AB=0.494021;ABP=4.51645;AC=140;AF=0.744681;AN=188;AO=6961;CIGAR=1M9D1M;DP=9425;DPB=3729.64;DPRA=0;EPP=15109.9;EPPR=5290.55;GTI=0;LEN=9;MEANALT=1.24468;MQM=38.4221;MQMR=59.9754;NS=94;NUMALT=1;ODDS=4.60547;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=242715;QR=85305;RO=2439;RPL=6961;RPP=15118.6;RPPR=5290.55;RPR=0;RUN=1;SAF=1;SAP=15109.9;SAR=6960;SRF=0;SRP=5299.23;SRR=2439;TYPE=del	GT:DP:AD:RO:QR:AO:QA:GL	1/1:31:0,31:0:0:31:993:-83.709,-9.33193,0	1/1:144:1,143:1:34:143:4958:-407.232,-39.9494,0	0/1:115:46,69:46:1621:69:2425:-165.642,0,-111.561	0/1:241:126,113:126:4420:113:3977:-271.546,0,-325.675	0/1:75:36,39:36:1275:39:1327:-91.0999,0,-92.4759	0/1:93:47,46:47:1644:46:1576:-102.847,0,-120.253	1/1:177:0,177:0:0:177:6155:-530.717,-53.2823,0	0/1:206:101,104:101:3548:104:3684:-238.843,0,-257.464	0/1:84:45,39:45:1564:39:1345:-86.5061,0,-115.764	1/1:103:0,103:0:0:103:3591:-310.752,-31.0061,0	0/1:71:31,40:31:1095:40:1412:-101.189,0,-77.4875	0/1:64:41,23:41:1425:23:790:-47.0719,0,-109.281	0/1:71:35,35:35:1226:35:1244:-81.184,0,-89.2114	0/1:57:23,33:23:793:33:1163:-81.6517,0,-54.4692	1/1:55:1,54:1:36:54:1899:-159.354,-12.9584,0	0/1:42:22,20:22:765:20:699:-46.5778,0,-56.5265	1/1:69:0,69:0:0:69:2414:-198.559,-20.7711,0	0/1:48:29,19:29:1014:19:680:-41.3192,0,-77.122	1/1:51:0,51:0:0:51:1793:-146.823,-15.3525,0	1/1:227:0,227:0:0:227:7902:-684.325,-68.3338,0	0/1:199:101,97:101:3518:97:3408:-228.981,0,-256.963	1/1:82:0,82:0:0:82:2854:-249.278,-24.6845,0	1/1:112:0,112:0:0:112:3880:-335.116,-33.7154,0	0/1:121:50,71:50:1737:71:2456:-173.403,0,-120.19	1/1:84:0,84:0:0:84:2954:-250.206,-25.2865,0	0/1:362:168,194:168:5882:194:6740:-481.263,0,-420.535	1/1:213:0,213:0:0:213:7455:-630.326,-64.1194,0	1/1:30:0,30:0:0:30:1043:-89.0301,-9.0309,0	0/1:330:155,171:155:5420:171:5941:-420.421,0,-389.452	0/1:152:85,67:85:2976:67:2344:-154.168,0,-222.29	0/1:142:65,76:65:2253:76:2654:-186.985,0,-160.23	0/1:14:5,9:5:180:9:303:-22.1286,0,-12.3376	1/1:21:0,21:0:0:21:733:-62.6762,-6.32163,0	1/1:7:0,7:0:0:7:218:-18.6732,-2.10721,0	0/1:13:7,6:7:250:6:212:-14.0071,0,-18.9334	0/1:18:9,9:9:313:9:301:-19.9417,0,-23.088	0/1:163:87,76:87:3047:76:2672:-184.048,0,-225.395	1/1:215:0,215:0:0:215:7425:-630.42,-64.7215,0	1/1:60:0,60:0:0:60:2128:-175.863,-18.0618,0	0/1:10:7,3:7:251:3:108:-6.47498,0,-19.9276	1/1:136:0,136:0:0:136:4744:-402.437,-40.9401,0	1/1:31:0,31:0:0:31:1087:-91.3388,-9.33193,0	1/1:100:0,100:0:0:100:3442:-292.441,-30.103,0	1/1:70:0,70:0:0:70:2484:-213.082,-21.0721,0	1/1:57:0,57:0:0:57:1971:-170.92,-17.1587,0	0/1:121:62,59:62:2169:59:2062:-142.858,0,-159.054	1/1:214:0,214:0:0:214:7460:-616.9,-64.4204,0	0/1:199:101,96:101:3536:96:3351:-228.512,0,-258.795	1/1:150:0,150:0:0:150:5191:-447.488,-45.1545,0	0/1:167:77,89:77:2693:89:3134:-220.012,0,-192.286	1/1:66:0,66:0:0:66:2299:-199.311,-19.868,0	0/1:13:9,4:9:321:4:136:-8.21747,0,-25.3201	0/1:122:68,53:68:2385:53:1842:-115.727,0,-178.126	0/1:69:38,31:38:1337:31:1059:-71.0016,0,-99.86	0/1:23:9,14:9:316:14:492:-34.2075,0,-21.8554	0/1:126:72,54:72:2474:54:1871:-120.042,0,-184.983	1/1:57:0,57:0:0:57:1959:-168.551,-17.1587,0	0/1:29:8,20:8:276:20:708:-53.6331,0,-16.3883	1/1:21:0,21:0:0:21:719:-63.6337,-6.32163,0	1/1:79:0,79:0:0:79:2777:-236.41,-23.7814,0	0/1:114:54,59:54:1890:59:2069:-144.469,0,-136.001	1/1:20:0,20:0:0:20:708:-61.2888,-6.0206,0	1/1:139:0,139:0:0:139:4838:-420.701,-41.8432,0	1/1:212:1,211:1:35:211:7428:-634.591,-60.3197,0	1/1:81:3,78:3:108:78:2719:-219.704,-14.3083,0	0/1:81:46,34:46:1615:34:1174:-77.3763,0,-121.199	0/1:200:106,93:106:3731:93:3219:-216.583,0,-275.875	1/1:107:3,104:3:106:104:3635:-303.719,-22.321,0	0/1:24:11,13:11:381:13:460:-31.0873,0,-27.3965	1/1:30:0,30:0:0:30:1021:-84.4217,-9.0309,0	0/1:59:38,21:38:1340:21:744:-47.813,0,-103.139	0/1:11:3,8:3:98:8:284:-21.616,0,-5.8326	1/1:140:0,140:0:0:140:4805:-400.946,-42.1442,0	1/1:61:0,61:0:0:61:2140:-178.003,-18.3628,0	0/1:244:108,134:108:3775:134:4656:-321.484,0,-266.75	1/1:122:0,122:0:0:122:4247:-366.634,-36.7257,0	1/1:164:0,164:0:0:164:5748:-473.297,-49.3689,0	0/1:98:55,41:55:1922:41:1441:-89.5174,0,-143.999	0/1:15:3,12:3:104:12:390:-28.5751,0,-5.18736	1/1:94:0,94:0:0:94:3314:-280.951,-28.2968,0	0/1:97:42,55:42:1456:55:1926:-129.585,0,-102.133	1/1:281:0,281:0:0:281:9800:-845.552,-84.5894,0	1/1:96:0,96:0:0:96:3356:-288.089,-28.8989,0	0/1:40:22,18:22:783:18:640:-43.6904,0,-58.7531	1/1:69:0,69:0:0:69:2429:-208.88,-20.7711,0	1/1:147:1,146:1:36:146:5087:-435.151,-40.6531,0	0/1:52:20,31:20:698:31:1093:-74.3732,0,-47.4316	1/1:65:0,65:0:0:65:2316:-191.027,-19.567,0	0/1:71:37,33:37:1308:33:1145:-73.4885,0,-96.5905	0/1:36:21,15:21:741:15:513:-32.6143,0,-56.1773	0/1:72:39,33:39:1338:33:1164:-76.7877,0,-99.0405	0/1:76:59,17:59:2046:17:590:-27.2999,0,-161.534	1/1:6:0,6:0:0:6:200:-17.0764,-1.80618,0	1/1:79:0,79:0:0:79:2772:-237.67,-23.7814,0
chr12	25447324	.	T	C	217721	PASS	AB=0.48413;ABP=17.9661;AC=140;AF=0.744681;AN=188;AO=10419;CIGAR=1X;DP=13973;DPB=13973;DPRA=0;EPP=22627.6;EPPR=7700.88;GTI=0;LEN=1;MEANALT=1.08511;MQM=59.984;MQMR=59.9867;NS=94;NUMALT=1;ODDS=7.4567;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=370597;QR=126906;RO=3545;RPL=10419;RPP=22627.6;RPPR=7700.88;RPR=0;RUN=1;SAF=10419;SAP=22627.6;SAR=0;SRF=3545;SRP=7700.88;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	1/1:85:0,85:0:0:85:3039:-273.74,-25.5876,0	1/1:123:0,123:0:0:123:4414:-397.423,-37.0267,0	0/1:278:132,146:132:4732:146:5201:-384.542,0,-342.34	0/1:297:156,139:156:5589:139:4953:-356.755,0,-413.967	0/1:121:55,66:55:1976:66:2367:-176.863,0,-141.69	0/1:97:60,37:60:2160:37:1332:-90.9825,0,-165.467	1/1:144:0,144:0:0:144:5141:-462.828,-43.3483,0	0/1:204:115,89:115:4116:89:3179:-224.924,0,-309.024	0/1:201:104,97:104:3728:97:3411:-246.696,0,-275.214	1/1:118:0,118:0:0:118:4195:-377.707,-35.5215,0	0/1:91:43,48:43:1540:48:1705:-126.34,0,-111.499	0/1:191:111,80:111:3979:80:2819:-196.452,0,-300.802	0/1:125:63,62:63:2256:62:2193:-160.005,0,-165.674	0/1:71:32,39:32:1148:39:1381:-103.214,0,-82.2567	1/1:123:0,123:0:0:123:4372:-393.654,-37.0267,0	0/1:98:42,56:42:1496:56:1991:-149.963,0,-105.434	1/1:49:0,49:0:0:49:1747:-157.514,-14.7505,0	0/1:43:28,15:28:1008:15:536:-35.6305,0,-78.0921	1/1:59:0,59:0:0:59:2095:-188.819,-17.7608,0	1/1:422:1,421:1:36:421:14987:-1344.97,-123.436,0	0/1:278:129,149:129:4612:149:5262:-390.032,0,-331.552	1/1:215:0,215:0:0:215:7621:-685.931,-64.7215,0	1/1:211:0,211:0:0:211:7492:-674.323,-63.5173,0	0/1:114:60,54:60:2156:54:1931:-139.749,0,-159.99	1/1:188:0,188:0:0:188:6696:-602.715,-56.5936,0	0/1:322:155,167:155:5549:167:5958:-439.396,0,-402.601	1/1:378:0,378:0:0:378:13405:-1206.25,-113.789,0	1/1:56:0,56:0:0:56:1997:-180.003,-16.8577,0	0/1:412:228,183:228:8187:183:6464:-457.765,0,-612.756	0/1:215:113,102:113:4006:102:3641:-263.173,0,-296.005	0/1:118:69,49:69:2468:49:1740:-121.36,0,-186.853	0/1:22:14,8:14:504:8:279:-18.8249,0,-39.0754	1/1:43:0,43:0:0:43:1512:-136.37,-12.9443,0	1/1:4:0,4:0:0:4:144:-13.3136,-1.20412,0	0/1:25:12,13:12:428:13:455:-33.7562,0,-31.3331	0/1:26:12,14:12:432:14:496:-37.1475,0,-31.3944	0/1:316:164,152:164:5876:152:5441:-394.692,0,-433.825	1/1:213:0,213:0:0:213:7610:-684.938,-64.1194,0	1/1:83:0,83:0:0:83:2947:-265.465,-24.9855,0	0/1:7:5,2:5:176:2:72:-4.72951,0,-14.0778	1/1:143:0,143:0:0:143:5096:-458.784,-43.0473,0	1/1:79:0,79:0:0:79:2805:-252.689,-23.7814,0	1/1:303:0,302:0:0:302:10694:-962.012,-90.9111,0	1/1:101:1,100:1:36:100:3520:-313.41,-26.8058,0	1/1:90:1,89:1:36:89:3143:-279.495,-23.4944,0	0/1:115:58,57:58:2069:57:2048:-149.973,0,-151.86	1/1:207:1,206:1:36:206:7310:-654.356,-58.7149,0	0/1:213:115,98:115:4110:98:3498:-250.912,0,-305.965	1/1:119:0,119:0:0:119:4263:-383.847,-35.8226,0	0/1:126:66,60:66:2359:60:2152:-156.017,0,-174.638	1/1:118:0,118:0:0:118:4157:-374.312,-35.5215,0	0/1:14:6,8:6:216:8:288:-22.053,0,-15.5761	0/1:368:183,184:183:6576:184:6578:-481.412,0,-481.229	0/1:89:51,38:51:1820:38:1341:-94.1886,0,-137.29	0/1:19:10,9:10:360:9:324:-23.7863,0,-27.0247	0/1:319:170,149:170:6089:149:5348:-385.423,0,-452.081	1/1:107:0,107:0:0:107:3813:-343.368,-32.2102,0	0/1:36:17,19:17:612:19:684:-51.0532,0,-44.5764	1/1:15:0,15:0:0:15:540:-48.9365,-4.51545,0	1/1:133:0,133:0:0:133:4737:-426.491,-40.037,0	0/1:165:81,84:81:2896:84:3004:-220.921,0,-211.206	1/1:12:0,12:0:0:12:432:-39.2212,-3.61236,0	1/1:240:0,240:0:0:240:8575:-771.746,-72.2472,0	1/1:207:0,207:0:0:207:7388:-664.966,-62.3132,0	1/1:93:7,86:7:248:86:3040:-251.165,-5.3316,0	0/1:120:62,58:62:2224:58:2064:-149.908,0,-164.301	0/1:226:99,127:99:3541:127:4510:-338.035,0,-250.864	1/1:316:4,311:4:144:311:11102:-985.755,-81.8707,0	0/1:73:47,26:47:1668:26:917:-60.8703,0,-128.432	1/1:97:0,97:0:0:97:3453:-310.982,-29.1999,0	0/1:77:29,48:29:1040:48:1724:-132.266,0,-70.7351	0/1:15:7,8:7:248:8:275:-20.568,0,-18.1487	1/1:255:1,254:1:36:254:9009:-807.195,-73.1644,0	1/1:138:0,138:0:0:138:4900:-441.151,-41.5421,0	0/1:243:116,126:116:4147:126:4449:-327.335,0,-300.204	1/1:267:0,267:0:0:267:9547:-859.185,-80.375,0	1/1:149:0,149:0:0:149:5282:-475.516,-44.8535,0	0/1:105:50,55:50:1800:55:1963:-145.336,0,-130.674	0/1:29:12,17:12:432:17:601:-45.6885,0,-30.4913	1/1:161:0,161:0:0:161:5761:-518.604,-48.4658,0	0/1:147:70,77:70:2516:77:2743:-202.861,0,-182.44	1/1:369:0,368:0:0:368:13009:-1170.27,-110.779,0	1/1:101:0,101:0:0:101:3585:-322.858,-30.404,0	0/1:98:61,37:61:2179:37:1323:-89.8704,0,-166.875	1/1:67:0,67:0:0:67:2383:-214.728,-20.169,0	1/1:211:6,205:6:216:205:7309:-638.069,-43.7268,0	0/1:40:17,23:17:612:23:824:-62.4421,0,-43.3722	1/1:133:0,133:0:0:133:4745:-427.208,-40.037,0	0/1:133:71,62:71:2527:62:2199:-158.138,0,-187.645	0/1:75:40,34:40:1428:34:1205:-86.0999,0,-106.182	0/1:185:85,100:85:3048:100:3529:-262.131,0,-218.859	0/1:135:96,39:96:3407:39:1400:-85.6601,0,-266.207	1/1:232:1,231:1:36:231:8175:-732.167,-66.2407,0	1/1:159:1,158:1:36:158:5612:-501.605,-44.2655,0
chr12	25447339	.	T	C	57737.4	PASS	AB=0.515296;ABP=16.6944;AC=48;AF=0.255319;AN=188;AO=3499;CIGAR=1X;DP=13818;DPB=13818;DPRA=0.96957;EPP=7600.99;EPPR=22397.4;GTI=0;LEN=1;MEANALT=1.06667;MQM=59.9977;MQMR=59.9861;NS=94;NUMALT=1;ODDS=8.44157;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=123184;QR=367254;RO=10313;RPL=3499;RPP=7600.99;RPPR=22397.4;RPR=0;RUN=1;SAF=3499;SAP=7600.99;SAR=0;SRF=10313;SRP=22397.4;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:85:85,0:85:3040:0:0:0,-25.5875,-273.83	0/0:120:120,0:120:4281:0:0:0,-36.1236,-385.467	0/1:273:145,127:145:5188:127:4518:-324.547,0,-384.82	0/1:289:139,150:139:4933:150:5284:-388.7,0,-357.126	0/1:121:64,57:64:2270:57:2032:-146.728,0,-168.134	0/1:95:35,60:35:1234:60:2086:-159.407,0,-82.7648	0/0:144:143,1:143:5101:1:36:0,-39.75,-455.635	0/1:201:91,110:91:3244:110:3878:-288.707,0,-231.673	0/1:199:97,102:97:3444:102:3612:-265.382,0,-250.268	0/0:115:115,0:115:4058:0:0:0,-34.6184,-365.218	0/1:88:45,43:45:1604:43:1488:-107.717,0,-118.16	0/1:184:77,107:77:2749:107:3721:-279.705,0,-192.261	0/1:121:59,62:59:2095:62:2175:-159.59,0,-152.395	0/1:71:38,33:38:1364:33:1125:-80.1774,0,-101.688	0/0:121:121,0:121:4281:0:0:0,-36.4246,-385.466	0/1:99:56,43:56:2000:43:1486:-104.227,0,-150.472	0/0:48:48,0:48:1715:0:0:0,-14.4494,-154.635	0/1:41:14,27:14:489:27:938:-72.3896,0,-31.9967	0/0:60:60,0:60:2120:0:0:0,-18.0618,-191.067	0/0:429:429,0:429:15289:0:0:0,-129.142,-1375.73	0/1:275:146,128:146:5219:128:4508:-323.167,0,-387.135	0/0:217:217,0:217:7726:0:0:0,-65.3235,-695.375	0/0:213:213,0:213:7510:0:0:0,-64.1194,-675.948	0/1:113:53,60:53:1873:60:2094:-154.71,0,-134.83	0/0:179:179,0:179:6403:0:0:0,-53.8844,-576.358	0/1:328:173,155:173:6140:155:5481:-394.682,0,-453.966	0/0:371:371,0:371:13243:0:0:0,-111.682,-1191.67	0/0:54:54,0:54:1927:0:0:0,-16.2556,-173.706	0/1:406:178,227:178:6283:227:8007:-598.385,0,-443.292	0/1:206:95,111:95:3364:111:3952:-293.859,0,-240.965	0/1:117:49,68:49:1737:68:2406:-181.575,0,-121.392	0/1:21:8,13:8:288:13:432:-32.8755,0,-19.9458	0/0:42:42,0:42:1478:0:0:0,-12.6433,-133.313	0/0:5:5,0:5:180:0:0:0,-1.50515,-16.5521	0/1:24:13,11:13:464:11:396:-28.758,0,-34.8728	0/1:28:14,14:14:500:14:495:-36.4542,0,-36.9073	0/1:312:150,162:150:5351:162:5702:-419.379,0,-387.8	0/0:210:210,0:210:7487:0:0:0,-63.2163,-673.874	0/0:84:84,0:84:3016:0:0:0,-25.2865,-271.67	0/1:8:3,5:3:108:5:180:-14.1438,0,-7.66693	0/0:140:140,0:140:5000:0:0:0,-42.1442,-450.149	0/0:78:78,0:78:2777:0:0:0,-23.4803,-250.17	0/0:299:298,0:298:10619:0:0:0,-89.7069,-955.263	0/0:103:102,1:102:3637:1:32:0,-27.8068,-324.335	0/0:87:86,1:86:3053:1:36:0,-22.5913,-271.401	0/1:111:54,57:54:1890:57:1999:-146.768,0,-136.96	0/0:204:203,1:203:7267:1:36:0,-57.8118,-650.482	0/1:211:94,117:94:3345:117:4134:-308.728,0,-237.749	0/0:116:115,1:115:4111:1:32:0,-31.7202,-366.975	0/1:125:60,65:60:2138:65:2270:-166.93,0,-155.058	0/0:116:116,0:116:4136:0:0:0,-34.9195,-372.423	0/1:13:8,5:8:264:5:171:-11.8121,0,-20.1669	0/1:361:184,177:184:6560:177:6299:-458.333,0,-481.811	0/1:85:35,50:35:1241:50:1754:-132.552,0,-86.405	0/1:17:9,8:9:320:8:280:-20.4218,0,-24.0248	0/1:317:149,168:149:5322:168:5948:-440.004,0,-383.687	0/0:106:106,0:106:3804:0:0:0,-31.9092,-342.557	0/1:36:19,17:19:680:17:601:-43.5813,0,-50.6921	0/0:15:15,0:15:540:0:0:0,-4.51545,-48.9365	0/0:131:131,0:131:4670:0:0:0,-39.4349,-420.462	0/1:164:82,81:82:2927:81:2820:-204.611,0,-214.237	0/0:12:12,0:12:428:0:0:0,-3.61236,-38.8588	0/0:241:241,0:241:8551:0:0:0,-72.5482,-769.59	0/0:206:203,3:203:7259:3:108:0,-51.937,-643.288	0/0:93:86,7:86:3017:7:244:0,-5.69693,-249.457	0/1:120:58,62:58:2072:62:2180:-160.338,0,-150.627	0/1:226:125,101:125:4479:101:3561:-252.665,0,-335.245	0/0:311:307,4:307:10934:4:144:0,-80.3067,-970.641	0/1:73:26,47:26:928:47:1648:-126.63,0,-61.8631	0/0:98:98,0:98:3480:0:0:0,-29.5009,-313.411	0/1:78:49,29:49:1751:29:1010:-67.7284,0,-134.393	0/1:14:6,8:6:216:8:275:-20.8691,0,-15.5761	0/0:257:256,1:256:9137:1:36:0,-73.7664,-818.707	0/0:138:138,0:138:4946:0:0:0,-41.5421,-445.288	0/1:230:119,111:119:4245:111:3884:-280.516,0,-312.765	0/0:268:268,0:268:9593:0:0:0,-80.676,-863.322	0/0:146:146,0:146:5203:0:0:0,-43.9504,-468.408	0/1:105:56,49:56:1977:49:1698:-121.493,0,-146.595	0/1:28:16,12:16:576:12:428:-30.43,0,-43.7461	0/0:162:162,0:162:5800:0:0:0,-48.7669,-522.114	0/1:141:74,67:74:2634:67:2365:-170.66,0,-194.861	0/0:371:370,0:370:13145:0:0:0,-111.381,-1182.42	0/0:100:99,1:99:3543:1:36:0,-26.5047,-315.48	0/1:98:38,60:38:1360:60:2143:-163.636,0,-93.1997	0/0:68:68,0:68:2429:0:0:0,-20.47,-218.864	0/0:207:200,7:200:7089:7:240:0,-40.3785,-616.115	0/1:40:23,17:23:824:17:592:-41.5652,0,-62.4421	0/0:132:132,0:132:4693:0:0:0,-39.736,-422.532	0/1:131:62,69:62:2185:69:2398:-176.641,0,-157.477	0/1:73:34,39:34:1212:39:1369:-101.531,0,-87.3239	0/1:186:102,84:102:3616:84:2977:-212.173,0,-269.655	0/1:131:36,95:36:1296:95:3368:-263.904,0,-77.509	0/0:223:223,0:223:7941:0:0:0,-67.1297,-714.67	0/0:159:158,1:158:5598:1:36:0,-44.2655,-500.347
chr12	25447376	.	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chr12	25636961	.	A	G	49437.6	PASS	AB=0.483288;ABP=18.0346;AC=48;AF=0.255319;AN=188;AO=3020;CIGAR=1X;DP=12711;DPB=12711;DPRA=1.35548;EPP=6560.86;EPPR=21040.2;GTI=1;LEN=1;MEANALT=1.04545;MQM=60;MQMR=59.9939;NS=94;NUMALT=1;ODDS=1.27108;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=107339;QR=344133;RO=9688;RPL=3020;RPP=6560.86;RPPR=21040.2;RPR=0;RUN=1;SAF=3020;SAP=6560.86;SAR=0;SRF=9688;SRP=21040.2;SRR=0;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:46:46,0:46:1636:0:0:0,-13.8474,-147.529	0/0:205:205,0:205:7288:0:0:0,-61.7111,-655.979	0/1:249:134,115:134:4780:115:4104:-294.59,0,-355.402	0/1:319:163,156:163:5763:156:5548:-403.418,0,-422.763	0/1:134:73,61:73:2598:61:2175:-155.678,0,-193.73	0/1:55:32,23:32:1140:23:820:-57.5659,0,-86.3526	0/0:134:134,0:134:4753:0:0:0,-40.338,-427.929	0/1:207:109,98:109:3896:98:3500:-252.898,0,-288.521	0/1:97:48,48:48:1720:48:1719:-125.736,0,-125.827	0/0:135:135,0:135:4794:0:0:0,-40.639,-431.619	0/1:41:23,18:23:812:18:644:-45.9484,0,-61.0587	0/1:65:31,33:31:1100:33:1172:-86.2006,0,-79.7233	0/1:70:31,39:31:1088:39:1388:-104.147,0,-77.1571	0/1:45:19,26:19:672:26:915:-69.1192,0,-47.2605	0/0:57:57,0:57:2028:0:0:0,-17.1587,-182.793	0/1:52:27,25:27:951:25:883:-64.1339,0,-70.2507	0/0:54:54,0:54:1916:0:0:0,-16.2556,-172.717	0/1:51:35,16:35:1244:16:572:-36.4609,0,-96.9121	0/0:43:43,0:43:1536:0:0:0,-12.9443,-138.533	0/0:371:370,1:370:13156:1:36:0,-108.084,-1180.26	0/1:256:118,138:118:4191:138:4892:-363.371,0,-300.31	0/0:182:181,1:181:6424:1:27:0,-52.0877,-575.552	0/0:79:79,0:79:2808:0:0:0,-23.7814,-252.961	0/1:98:38,60:38:1345:60:2144:-163.727,0,-91.8472	0/0:89:89,0:89:3171:0:0:0,-26.7917,-285.615	0/1:406:198,208:198:7027:208:7391:-543.023,0,-510.279	0/0:350:349,1:349:12368:1:36:0,-101.762,-1109.37	0/0:34:34,0:34:1204:0:0:0,-10.235,-108.666	0/1:372:196,176:196:6913:176:6260:-451.514,0,-510.263	0/1:88:35,53:35:1244:53:1883:-143.257,0,-85.774	0/1:223:101,122:101:3602:122:4343:-323.917,0,-257.256	0/1:27:16,11:16:572:11:392:-27.4922,0,-43.6856	0/0:29:29,0:29:1028:0:0:0,-8.72987,-92.833	0/0:15:15,0:15:532:0:0:0,-4.51545,-48.2131	0/1:35:23,12:23:808:12:424:-27.9604,0,-62.5041	0/1:32:11,21:11:396:21:752:-58.3733,0,-26.3498	0/1:182:91,91:91:3234:91:3235:-236.585,0,-236.495	0/0:314:314,0:314:11189:0:0:0,-94.5234,-1006.75	0/0:59:59,0:59:2096:0:0:0,-17.7608,-188.902	0/1:11:5,6:5:176:6:216:-16.4792,0,-12.8737	0/0:205:204,1:204:7250:1:32:0,-58.5118,-649.36	0/0:36:36,0:36:1262:0:0:0,-10.8371,-113.881	0/0:185:185,0:185:6582:0:0:0,-55.6905,-592.465	0/0:94:94,0:94:3300:0:0:0,-28.2968,-297.222	0/0:54:54,0:54:1914:0:0:0,-16.2556,-172.536	0/1:108:56,52:56:1975:52:1835:-132.916,0,-145.513	0/0:208:207,1:207:7376:1:36:0,-59.016,-660.294	0/1:355:189,166:189:6730:166:5889:-423.259,0,-498.913	0/0:118:118,0:118:4198:0:0:0,-35.5215,-378.003	0/1:377:182,195:182:6491:195:6922:-509.562,0,-470.789	0/0:221:218,3:218:7777:3:108:0,-56.4525,-689.888	0/1:28:19,9:19:659:9:320:-20.7135,0,-51.2035	0/1:246:127,119:127:4508:119:4240:-307.728,0,-331.839	0/1:42:24,18:24:848:18:644:-45.6473,0,-63.9964	0/1:32:17,15:17:600:15:536:-38.9419,0,-44.6962	0/1:243:124,119:124:4411:119:4238:-308.45,0,-324.014	0/0:52:52,0:52:1855:0:0:0,-15.6536,-167.229	0/1:31:22,9:22:788:9:324:-20.1739,0,-61.9129	0/0:32:32,0:32:1139:0:0:0,-9.63296,-102.818	0/0:65:65,0:65:2315:0:0:0,-19.5669,-208.61	0/1:104:49,55:49:1735:55:1955:-144.918,0,-125.127	0/0:14:14,0:14:491:0:0:0,-4.21442,-44.5211	0/0:409:409,0:409:14501:0:0:0,-123.121,-1304.85	0/0:209:206,3:206:7296:3:108:0,-52.8401,-646.622	0/0:71:68,3:68:2428:3:108:0,-11.298,-208.701	0/1:199:102,97:102:3619:97:3425:-248.559,0,-265.985	0/1:267:154,112:154:5475:112:3959:-276.069,0,-412.448	0/0:209:207,2:207:7341:2:63:0,-56.9321,-654.761	0/1:13:10,3:10:360:3:104:-5.78942,0,-28.8309	0/0:139:138,1:138:4936:1:36:0,-38.2449,-440.792	0/1:67:37,30:37:1312:30:1067:-76.1722,0,-98.2127	0/1:27:19,8:19:680:8:284:-17.7755,0,-53.4014	0/0:152:152,0:152:5416:0:0:0,-45.7566,-487.573	0/0:104:103,1:103:3672:1:36:0,-27.7088,-327.087	0/1:154:91,63:91:3218:63:2227:-154.336,0,-243.486	0/0:226:225,1:225:8001:1:36:0,-64.4345,-716.519	0/0:235:234,1:234:8312:1:36:0,-67.1438,-744.5	0/1:130:67,63:67:2384:63:2260:-164.529,0,-175.684	0/1:18:9,9:9:324:9:320:-23.7238,0,-24.0873	0/0:197:197,0:197:6971:0:0:0,-59.3029,-627.462	0/1:270:156,114:156:5552:114:4056:-283.952,0,-418.53	0/0:321:319,2:319:11269:2:72:0,-89.7939,-1007.27	0/0:95:94,1:94:3352:1:36:0,-24.9996,-298.3	0/1:60:30,30:30:1068:30:1059:-77.5586,0,-78.3703	0/0:106:106,0:106:3754:0:0:0,-31.9092,-338.062	0/0:158:157,1:157:5567:1:32:0,-44.3634,-497.957	0/1:59:34,25:34:1208:25:892:-62.8389,0,-91.2653	0/0:89:88,1:88:3144:1:36:0,-23.1934,-279.588	0/1:85:42,43:42:1492:43:1524:-111.866,0,-108.987	0/1:22:13,9:13:451:9:316:-22.1562,0,-34.2972	0/1:67:41,26:41:1451:26:923:-63.2178,0,-110.716	0/1:74:26,48:26:920:48:1702:-131.188,0,-60.8408	0/0:223:223,0:223:7963:0:0:0,-67.1297,-716.695	0/0:95:93,2:93:3293:2:72:0,-21.7611,-289.753
chr12	25796137	.	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chr12	25827953	.	G	T	32087.4	PASS	AB=0.486139;ABP=9.63198;AC=49;AF=0.260638;AN=188;AO=1956;CIGAR=1X;DP=8046;DPB=8046;DPRA=1.20023;EPP=4250.41;EPPR=13225.1;GTI=1;LEN=1;MEANALT=1;MQM=59.9796;MQMR=59.9941;NS=94;NUMALT=1;ODDS=4.92306;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69803;QR=216103;RO=6089;RPL=0;RPP=4250.41;RPPR=13225.1;RPR=1956;RUN=1;SAF=0;SAP=4250.41;SAR=1956;SRF=0;SRP=13225.1;SRR=6089;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/0:31:31,0:31:1072:0:0:0,-9.33193,-96.7851	0/0:141:141,0:141:5048:0:0:0,-42.4452,-454.465	0/1:81:48,33:48:1697:33:1167:-80.953,0,-128.631	0/1:137:70,67:70:2498:67:2380:-173.217,0,-183.831	0/1:58:33,25:33:1176:25:896:-63.5002,0,-88.688	0/1:72:29,43:29:1036:43:1509:-114.428,0,-71.8798	0/0:144:144,0:144:5105:0:0:0,-43.3483,-459.594	0/1:130:73,57:73:2592:57:2032:-144.019,0,-194.393	0/1:65:21,44:21:741:44:1566:-121.663,0,-47.4446	0/0:124:124,0:124:4376:0:0:0,-37.3277,-394.013	0/1:51:27,24:27:940:24:855:-61.9176,0,-69.5583	0/0:76:76,0:76:2705:0:0:0,-22.8783,-243.693	0/1:79:40,39:40:1428:39:1383:-100.987,0,-105.036	0/1:77:39,38:39:1377:38:1360:-99.5213,0,-101.047	0/0:64:64,0:64:2271:0:0:0,-19.2659,-204.652	0/1:50:22,28:22:746:28:999:-75.173,0,-52.4	0/0:68:68,0:68:2406:0:0:0,-20.47,-216.794	0/1:45:21,24:21:744:24:864:-64.5362,0,-53.738	0/0:25:25,0:25:896:0:0:0,-7.52575,-80.9604	0/0:117:117,0:117:4153:0:0:0,-35.2205,-373.955	0/1:106:40,66:40:1414:66:2376:-182.188,0,-95.6466	0/0:76:76,0:76:2694:0:0:0,-22.8783,-242.705	0/0:145:145,0:145:5139:0:0:0,-43.6493,-462.654	0/1:74:47,27:47:1662:27:952:-63.719,0,-127.59	0/0:82:82,0:82:2931:0:0:0,-24.6845,-264.024	0/1:353:198,155:198:7055:155:5547:-393.077,0,-528.749	0/1:146:79,67:79:2798:67:2395:-171.856,0,-208.11	0/0:30:30,0:30:1080:0:0:0,-9.0309,-97.5132	0/1:147:68,79:68:2435:79:2800:-207.988,0,-175.153	0/1:161:88,73:88:3134:73:2624:-187.941,0,-233.817	0/1:152:87,65:87:3083:65:2327:-163.933,0,-231.941	0/1:10:7,3:7:248:3:108:-7.06487,0,-19.6539	0/0:9:9,0:9:324:0:0:0,-2.70927,-29.5059	0/0:8:8,0:8:288:0:0:0,-2.40824,-26.2674	1/1:5:0,5:0:0:5:180:-16.5521,-1.50515,0	0/1:7:3,4:3:99:4:144:-11.2064,0,-7.12937	0/1:171:89,82:89:3171:82:2936:-212.99,0,-234.139	0/0:251:251,0:251:8924:0:0:0,-75.5585,-803.144	0/0:50:50,0:50:1775:0:0:0,-15.0515,-160.032	0/1:8:3,5:3:104:5:176:-13.7768,0,-7.29457	0/0:90:85,5:85:2977:5:180:0,-10.5406,-251.608	0/0:31:31,0:31:1104:0:0:0,-9.33193,-99.6706	0/0:95:95,0:95:3399:0:0:0,-28.5978,-306.122	0/0:61:61,0:61:2159:0:0:0,-18.3628,-194.577	0/0:60:60,0:60:2104:0:0:0,-18.0618,-189.628	0/1:145:68,77:68:2409:77:2756:-204.633,0,-173.416	0/0:116:116,0:116:4112:0:0:0,-34.9195,-370.266	0/1:149:72,77:72:2577:77:2729:-200.993,0,-187.324	0/0:151:150,1:150:5362:1:36:0,-41.8573,-479.114	0/1:131:74,57:74:2626:57:2036:-144.077,0,-197.152	0/0:34:34,0:34:1220:0:0:0,-10.235,-110.107	0/1:10:6,4:6:216:4:144:-10.3033,0,-16.7802	0/1:81:34,47:34:1201:47:1688:-127.824,0,-84.0102	0/1:27:15,12:15:540:12:417:-29.7324,0,-40.8087	0/1:18:8,10:8:280:10:360:-27.3258,0,-20.1208	0/1:53:25,28:25:883:28:996:-74.0003,0,-63.8329	0/0:48:48,0:48:1691:0:0:0,-14.4494,-152.473	0/1:14:10,4:10:345:4:144:-9.0992,0,-27.1664	0/0:13:13,0:13:449:0:0:0,-3.91339,-40.7375	0/0:76:76,0:76:2719:0:0:0,-22.8783,-244.953	0/1:112:60,52:60:2116:52:1868:-134.684,0,-156.992	0/0:11:11,0:11:388:0:0:0,-3.31133,-35.2574	0/0:206:205,1:205:7337:1:36:0,-58.4139,-656.779	0/0:263:258,5:258:9209:5:180:0,-62.6188,-812.23	0/0:61:57,4:57:2016:4:144:0,-5.04921,-168.397	0/1:34:15,19:15:521:19:676:-50.933,0,-36.9813	0/1:170:80,90:80:2857:90:3191:-236.24,0,-206.191	0/0:126:123,3:123:4416:3:108:0,-27.8546,-387.536	0/1:24:13,11:13:460:11:392:-28.3953,0,-34.5107	0/0:70:70,0:70:2448:0:0:0,-21.0721,-220.572	0/1:94:48,46:48:1697:46:1648:-120.312,0,-124.717	0/1:29:13,16:13:464:16:561:-42.0863,0,-33.3676	0/0:114:114,0:114:4012:0:0:0,-34.3174,-361.268	0/0:39:39,0:39:1359:0:0:0,-11.7402,-122.605	0/1:200:102,98:102:3635:98:3504:-255.356,0,-267.15	0/0:96:95,0:95:3359:0:0:0,-28.5978,-302.167	0/0:113:113,0:113:4017:0:0:0,-34.0164,-361.717	0/1:96:54,42:54:1909:42:1504:-106.756,0,-143.187	0/1:14:10,4:10:352:4:144:-9.0992,0,-27.8038	0/0:68:68,0:68:2423:0:0:0,-20.47,-218.326	0/1:84:50,34:50:1771:34:1211:-84.009,0,-134.386	0/0:160:158,2:158:5588:2:72:0,-41.3281,-496.209	0/0:109:109,0:109:3864:0:0:0,-32.8123,-347.85	0/1:47:29,18:29:1040:18:644:-44.1422,0,-79.7636	0/0:80:80,0:80:2795:0:0:0,-24.0824,-251.791	0/0:110:109,1:109:3879:1:36:0,-29.515,-345.705	0/1:37:19,18:19:684:18:644:-47.1525,0,-50.7522	0/0:70:70,0:70:2447:0:0:0,-21.0721,-220.481	0/1:63:34,29:34:1209:29:1036:-74.589,0,-90.1492	0/1:40:23,17:23:787:17:608:-43.0108,0,-59.1012	0/1:66:31,35:31:1108:35:1260:-93.8375,0,-80.163	0/1:50:14,36:14:482:36:1274:-99.91,0,-28.6546	0/0:80:80,0:80:2850:0:0:0,-24.0824,-256.737	0/0:81:81,0:81:2866:0:0:0,-24.3834,-258.178
chr12	25870976	.	T	A	147790	PASS	AB=0.381571;ABP=3789.5;AC=95;AF=0.505319;AN=188;AO=11874;CIGAR=1X;DP=31097;DPB=31097;DPRA=0;EPP=25735;EPPR=41671.4;GTI=1;LEN=1;MEANALT=1.05319;MQM=31.3957;MQMR=34.1184;NS=94;NUMALT=1;ODDS=51.2967;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=422976;QR=686096;RO=19217;RPL=6267;RPP=82.6712;RPPR=2609.73;RPR=5607;RUN=1;SAF=6273;SAP=85.5943;SAR=5601;SRF=12017;SRP=2624.95;SRR=7200;TYPE=snp	GT:DP:AD:RO:QR:AO:QA:GL	0/1:154:126,28:126:4457:28:995:-18.2935,0,-240.76	0/1:496:380,116:380:13620:116:4100:-153.914,0,-648.263	0/1:373:274,99:274:9798:99:3531:-157.482,0,-531.426	0/1:805:433,372:433:15490:372:13252:-614.184,0,-689.541	0/1:326:142,184:142:5092:184:6600:-330.75,0,-188.154	0/1:177:101,76:101:3599:76:2710:-163.971,0,-203.119	0/1:547:257,290:257:9195:290:10325:-532.025,0,-431.693	0/1:544:428,116:428:15280:116:4139:-145.376,0,-761.684	0/1:428:277,151:277:9906:151:5343:-297.948,0,-484.64	0/1:495:308,187:308:10945:187:6660:-234.221,0,-536.582	0/1:269:189,80:189:6773:80:2812:-103.787,0,-277.799	0/1:272:187,85:187:6635:85:3035:-180.176,0,-323.678	0/1:182:127,55:127:4568:55:1959:-113.629,0,-229.071	0/1:171:98,73:98:3464:73:2560:-116.46,0,-130.161	0/1:242:141,101:141:5023:101:3612:-170.203,0,-213.77	0/1:156:99,57:99:3539:57:2026:-98.0975,0,-129.353	0/1:195:145,50:145:5158:50:1796:-95.9157,0,-236.508	0/1:126:95,31:95:3400:31:1097:-54.8031,0,-133.168	0/1:165:124,41:124:4434:41:1446:-74.4411,0,-192.278	0/1:859:377,482:377:13489:482:17174:-909.866,0,-654.355	0/1:488:230,258:230:8194:258:9167:-490.373,0,-341.719	0/1:217:150,67:150:5344:67:2395:-71.2979,0,-280.972	0/1:290:165,125:165:5920:125:4439:-239.988,0,-318.075	0/1:326:172,154:172:6118:154:5498:-263.288,0,-223.893	0/1:328:246,81:246:8692:81:2896:-111.194,0,-439.845	0/1:1044:666,377:666:23757:377:13417:-462.234,0,-1160.66	0/1:887:494,393:494:17642:393:14028:-640.79,0,-827.201	0/1:116:85,31:85:3026:31:1103:-44.8253,0,-128.238	0/1:723:434,289:434:15464:289:10320:-469.959,0,-770.464	0/1:402:222,180:222:7934:180:6415:-285.784,0,-405.546	0/1:479:234,245:234:8353:245:8666:-433.716,0,-398.696	0/1:17:7,10:7:252:10:356:-15.5237,0,-17.8758	0/1:48:27,21:27:964:21:748:-39.7122,0,-57.0568	0/1:31:9,22:9:324:22:792:-55.1557,0,-13.9388	0/1:37:14,23:14:495:23:828:-52.0926,0,-17.2865	0/1:44:22,22:22:788:22:775:-48.3442,0,-45.8316	0/1:775:524,250:524:18660:250:8875:-318.845,0,-844.221	0/1:486:257,229:257:9197:229:8152:-390.447,0,-430.761	0/1:173:141,32:141:5051:32:1112:-43.3276,0,-206.502	1/1:15:1,14:1:36:14:504:-26.9872,-0.917175,0	0/1:449:291,158:291:10386:158:5645:-217.54,0,-515.593	0/1:99:73,26:73:2612:26:928:-34.7604,0,-120.684	0/1:490:329,160:329:11706:160:5686:-244.375,0,-595.876	0/1:274:210,64:210:7511:64:2292:-47.7991,0,-361.408	0/1:260:158,102:158:5620:102:3581:-137.126,0,-246.605	0/1:286:198,88:198:7068:88:3156:-106.115,0,-407.209	0/1:286:180,106:180:6439:106:3780:-210.707,0,-266.679	0/1:618:316,302:316:11283:302:10812:-485.504,0,-569.023	0/1:430:253,177:253:9059:177:6274:-264.721,0,-408.365	0/1:495:333,162:333:11940:162:5791:-202.974,0,-571.992	0/1:751:442,309:442:15725:309:11052:-419.323,0,-677.901	0/1:28:5,23:5:180:23:824:-51.315,0,-6.04028	0/1:401:285,116:285:10199:116:4123:-187.488,0,-558.974	0/1:160:79,81:79:2824:81:2882:-155.401,0,-126.602	0/1:31:18,13:18:648:13:468:-24.0495,0,-34.5505	0/1:304:181,123:181:6442:123:4391:-192.433,0,-291.359	0/1:244:120,124:120:4296:124:4393:-216.15,0,-214.388	0/1:39:14,25:14:500:25:873:-31.0562,0,-23.988	0/1:54:29,25:29:1032:25:896:-42.0445,0,-51.5186	0/1:186:145,41:145:5195:41:1460:-46.9547,0,-300.335	0/1:385:244,141:244:8669:141:5043:-218.483,0,-400.102	0/1:19:7,12:7:252:12:428:-11.4197,0,-12.921	0/1:478:246,232:246:8798:232:8290:-328.089,0,-418.371	0/1:717:422,295:422:15065:295:10562:-465.616,0,-645.183	0/1:272:191,81:191:6824:81:2882:-104.126,0,-345.887	0/1:319:147,172:147:5233:172:6164:-302.588,0,-211.973	0/1:768:443,325:443:15824:325:11587:-475.977,0,-734.04	0/1:257:189,68:189:6750:68:2427:-83.4563,0,-384.134	0/1:113:59,54:59:2120:54:1927:-103.096,0,-105.042	0/1:193:128,65:128:4588:65:2309:-132.171,0,-252.935	0/1:261:214,47:214:7597:47:1679:-12.9593,0,-390.564	0/1:77:35,42:35:1260:42:1484:-77.3932,0,-65.2169	0/1:335:212,123:212:7579:123:4371:-259.996,0,-392.256	0/1:311:219,92:219:7780:92:3283:-165.076,0,-376.156	0/1:737:401,336:401:14298:336:11946:-526.228,0,-772.152	0/1:610:347,261:347:12408:261:9329:-416.07,0,-607.448	0/1:346:223,123:223:7976:123:4382:-214.047,0,-419.662	0/1:469:285,184:285:10196:184:6549:-359.043,0,-520.77	0/1:32:23,9:23:820:9:324:-12.4341,0,-42.6886	0/1:508:266,242:266:9528:242:8643:-405.631,0,-417.454	0/1:245:123,122:123:4415:122:4335:-267.057,0,-164.871	0/1:772:485,287:485:17344:287:10277:-378.771,0,-792.305	0/1:367:296,71:296:10555:71:2513:-51.5646,0,-471.637	0/1:145:118,27:118:4220:27:947:-21.73,0,-206.421	0/1:218:179,39:179:6412:39:1385:-18.9601,0,-298.356	0/1:410:327,83:327:11671:83:2929:-67.3541,0,-557.718	0/1:92:66,26:66:2350:26:902:-49.7649,0,-106.642	0/1:248:191,57:191:6793:57:2035:-100.65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chr12	25870985	.	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