##FastQC	0.12.1
>>Basic Statistics	pass
#Measure	Value
Filename	SnRK1a1OE.control.2d.R.3.R1.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24234100
Total Bases	3.6 Gbp
Sequences flagged as poor quality	0
Sequence length	150
%GC	44
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	34.78414593486038	36.0	34.0	38.0	30.0	39.0
2	34.6574554862776	35.0	34.0	37.0	31.0	39.0
3	34.811938260550214	35.0	34.0	38.0	31.0	39.0
4	34.80609995832319	35.0	34.0	38.0	31.0	39.0
5	34.68403621343479	35.0	34.0	37.0	31.0	39.0
6	34.68378706038186	35.0	34.0	37.0	31.0	39.0
7	34.72105211251914	35.0	34.0	37.0	32.0	39.0
8	34.841717868623135	35.0	34.0	37.0	31.0	39.0
9	34.80138858055385	35.0	34.0	37.0	31.0	39.0
10-14	34.78061452251167	35.0	34.0	37.0	31.2	39.0
15-19	34.791982669048984	35.0	34.0	37.0	31.0	39.0
20-24	34.782880395805904	35.0	34.0	37.0	31.0	39.0
25-29	34.77807490271972	35.0	34.0	37.0	31.0	39.0
30-34	34.76098563594274	35.0	34.0	37.0	31.0	39.0
35-39	34.75336129668525	35.0	34.0	37.0	31.0	39.0
40-44	34.70687796121994	35.0	34.0	37.0	31.0	39.0
45-49	34.612896232994004	35.0	34.0	37.0	31.0	39.0
50-54	34.58309444130378	35.0	34.0	37.0	31.0	39.0
55-59	34.571112894640194	35.0	34.0	37.0	31.0	39.0
60-64	34.545072942671695	35.0	34.0	37.0	30.2	39.0
65-69	34.51340146322744	35.0	34.0	37.0	30.0	39.0
70-74	34.51211779269706	35.0	34.0	37.0	30.0	39.0
75-79	34.4947754527711	35.0	34.0	37.0	30.0	39.0
80-84	34.48211190842655	35.0	34.0	37.0	30.0	39.0
85-89	34.46188713424472	35.0	34.0	37.0	30.0	39.0
90-94	34.440263323168594	35.0	34.0	37.0	30.0	39.0
95-99	34.42385098683261	35.0	34.0	37.0	30.0	39.0
100-104	34.38345949715483	35.0	34.0	37.0	30.0	39.0
105-109	34.3588488617279	35.0	34.0	37.0	30.0	39.0
110-114	34.327161883461734	35.0	34.0	37.0	30.0	39.0
115-119	34.289896030799575	35.0	34.0	37.0	30.0	39.0
120-124	34.24974576320144	35.0	34.0	37.0	30.0	39.0
125-129	34.23785171308198	35.0	34.0	37.0	30.0	39.0
130-134	34.184323271753435	35.0	34.0	37.0	29.2	39.0
135-139	34.15214353328574	35.0	34.0	37.0	29.0	39.0
140-144	34.103397014950005	35.0	34.0	37.0	29.0	39.0
145-149	34.07052025039098	35.0	34.0	37.0	29.0	39.0
150	34.06249260339769	35.0	34.0	37.0	29.0	39.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
20	1.0
21	21.0
22	361.0
23	3516.0
24	22174.0
25	86606.0
26	217932.0
27	394478.0
28	577708.0
29	753035.0
30	938478.0
31	1174482.0
32	1499213.0
33	1966703.0
34	2718606.0
35	4269189.0
36	8614031.0
37	997556.0
38	10.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	35.634330929525866	10.716675798444617	14.59034051834662	39.0586527536829
2	22.262200360995784	13.116488277375355	37.26596076813816	27.3553505934907
3	20.787177591576413	18.138597050561124	28.994036631060986	32.08018872680148
4	25.87396188489377	26.0864850330935	22.391607747540178	25.647945334472556
5	25.42814513384296	31.505353289368788	24.497294552892306	18.56920702389594
6	18.697900857321446	36.96988918582604	25.861010467736268	18.471199489116238
7	15.680646963204673	24.382275987088104	41.23460334769011	18.702473702017112
8	18.317880917674803	24.09130532112325	31.844970356821957	25.745843404379993
9	19.544856458071486	22.71129953455196	32.98661070908068	24.757233298295883
10-14	20.175360896610997	29.408448175830387	27.119270361369047	23.29692056618957
15-19	20.347030510062986	28.044085245976376	27.965273758464264	23.643610485496374
20-24	20.500817631881077	28.21196623208597	27.66417577346152	23.62304036257143
25-29	20.49131525742278	28.385829337512625	27.554377814013144	23.56847759105145
30-34	20.47008989488553	28.092356811270392	27.589087797554424	23.848465496289656
35-39	20.57225094596557	28.09656307731728	27.620862631336973	23.71032334538017
40-44	20.626766379668602	28.157728871785885	27.503667652288904	23.711837096256605
45-49	20.727917719018528	27.927293149925625	27.47208079381788	23.872708337237963
50-54	20.846183177382578	27.889957487722228	27.557217002663037	23.706642332232157
55-59	20.85368024156804	27.922191747032738	27.47981283933739	23.744315172061835
60-64	20.807308873423455	27.827071026034083	27.472265440091086	23.893354660451372
65-69	20.915213087544643	27.734780625371762	27.560577875298677	23.789428411784918
70-74	21.023947545425102	27.669281204734936	27.537551717814257	23.76921953202571
75-79	21.035678191892565	27.569156744503825	27.537348625680803	23.85781643792281
80-84	21.0802418115914	27.566501612564192	27.51682445139022	23.836432124454188
85-89	21.07315713504972	27.55558202333636	27.57138951662296	23.799871324990953
90-94	21.075498950873673	27.43005454486364	27.522195075682955	23.972251428579728
95-99	21.169519684265357	27.33568859030945	27.64180801015866	23.852983715266536
100-104	21.223683516961927	27.397008076205147	27.493052160371278	23.886256246461645
105-109	21.201557172841373	27.230017234247146	27.594131845638426	23.974293747273055
110-114	21.30280748038622	27.201575123593685	27.632429424116584	23.863187971903507
115-119	21.339149087060207	27.254449109701046	27.571217008718513	23.835184794520234
120-124	21.304211528601773	27.149575133360777	27.56096694427165	23.985246393765802
125-129	21.32570021287218	27.0802813288523	27.64841694049187	23.945601517783647
130-134	21.41118718008185	27.192966674398477	27.526038816428883	23.869807329090794
135-139	21.39345247697514	27.041702491894203	27.635481008803524	23.92936402232713
140-144	21.462007215159794	26.994445377382014	27.733486259535205	23.81006114792299
145-149	21.46957129148	27.45085104915027	27.456711389345458	23.62286627002427
150	21.32570033416585	27.013332549863467	27.58647596768088	24.074491148289802
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.5
6	1.5
7	1.0
8	0.0
9	0.5
10	1.0
11	4.5
12	8.0
13	15.0
14	35.5
15	74.0
16	168.0
17	352.5
18	645.0
19	1209.0
20	2301.5
21	3913.0
22	6145.0
23	9756.0
24	15611.5
25	24432.0
26	36343.0
27	51332.5
28	69782.0
29	97560.0
30	132635.0
31	168724.0
32	201697.5
33	237806.5
34	278879.5
35	326763.5
36	402013.0
37	503963.5
38	624659.5
39	773202.5
40	941376.5
41	1104156.0
42	1270750.0
43	1442725.5
44	1579307.5
45	1658520.0
46	1675797.5
47	1630076.0
48	1538543.0
49	1410262.5
50	1244670.0
51	1065246.5
52	886709.5
53	708420.0
54	546762.5
55	413904.5
56	309126.5
57	230524.5
58	172954.5
59	128084.5
60	90670.0
61	65323.5
62	47498.0
63	31119.5
64	20382.5
65	15167.0
66	13778.5
67	10221.0
68	5046.0
69	2572.0
70	1992.0
71	1257.0
72	575.0
73	243.0
74	119.0
75	77.5
76	46.0
77	37.0
78	19.0
79	2.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	1.898151777866725E-4
2	9.078117198493032E-5
3	0.1334648284854812
4	1.4029817488580141E-4
5	1.1553967343536587E-4
6	6.602267053449479E-5
7	7.014908744290071E-5
8	1.0316042271014809E-4
9	1.2791892416058362E-4
10-14	2.236517964356011E-4
15-19	2.863733334433711E-4
20-24	3.672511048481272E-4
25-29	2.9462616726018295E-4
30-34	2.59138981847892E-4
35-39	1.0563627285519166E-4
40-44	2.8389748329832754E-4
45-49	1.9724272822180318E-4
50-54	7.675135449635019E-5
55-59	1.3699704135907668E-4
60-64	1.634061095728746E-4
65-69	0.053696237945704606
70-74	1.7413479353473E-4
75-79	1.469004419392509E-4
80-84	1.0728683961855403E-4
85-89	9.73834390383798E-5
90-94	1.2709364077890246E-4
95-99	1.1636495681704705E-4
100-104	8.335362154979967E-5
105-109	1.1223853990864113E-4
110-114	5.9420403481045304E-5
115-119	6.43721037711324E-5
120-124	1.0316042271014809E-4
125-129	1.1058797314527876E-4
130-134	4.4565302610783976E-5
135-139	5.529398657263938E-5
140-144	5.9420403481045304E-5
145-149	4.9517002900871086E-5
150	1.0728683961855403E-4
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
150	2.42341E7
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	50.97665001205682
#Duplication Level	Percentage of total
1	39.85649624958477
2	10.096944291865569
3	6.230425186671833
4	4.401570340292031
5	3.276305238371614
6	2.6238082678021772
7	2.164432321053431
8	1.8271400808089397
9	1.5872735174099275
>10	18.052695636275942
>50	4.487114184119921
>100	4.530196130399186
>500	0.485320632505326
>1k	0.35767673934647515
>5k	0.02260118349283222
>10k+	0.0
>>END_MODULE
>>Overrepresented sequences	pass
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	PolyA	PolyG
1	0.0	8.252833816811847E-6	0.0	0.0	1.6918309324464288E-4	2.8884918358841467E-5
2	4.1264169084059235E-6	8.66547550765244E-5	0.0	1.2379250725217771E-5	0.0022035066290887633	6.602267053449478E-5
3	4.1264169084059235E-6	9.903400580174217E-5	0.0	1.2379250725217771E-5	0.0034579373692441642	1.2791892416058365E-4
4	4.539058599246516E-5	1.1553967343536587E-4	0.0	1.2379250725217771E-5	0.00520341172149987	1.4029817488580141E-4
5	4.9517002900871086E-5	1.1966609034377179E-4	0.0	1.2379250725217771E-5	0.006569255718182231	1.568038425194251E-4
6	9.078117198493032E-5	1.2379250725217772E-4	0.0	1.2379250725217771E-5	0.007691641117268642	1.6918309324464288E-4
7	9.490758889333625E-5	1.5267742561101918E-4	0.0	1.2379250725217771E-5	0.008970830358874478	1.6918309324464288E-4
8	1.1141325652695995E-4	1.568038425194251E-4	0.0	1.2379250725217771E-5	0.011343520081207885	1.8568876087826658E-4
9	1.1966609034377179E-4	1.568038425194251E-4	0.0	1.2379250725217771E-5	0.015115065135490898	1.9806801160348434E-4
10-11	1.5061421715681622E-4	1.7330951015304878E-4	0.0	1.2379250725217771E-5	0.020413384445884107	2.929756004968206E-4
12-13	1.836255524240636E-4	1.7743592706145471E-4	0.0	1.2379250725217771E-5	0.024739932574347714	3.734407302107361E-4
14-15	2.0219442851189027E-4	2.001312200576873E-4	0.0	1.2379250725217771E-5	0.02959878848399569	4.085152739321865E-4
16-17	2.2488972150812287E-4	2.2901613841652877E-4	0.0	1.2379250725217771E-5	0.03451541423036135	4.208945246574042E-4
18-19	2.7853314131739986E-4	2.558378483211673E-4	0.0	1.2379250725217771E-5	0.03864183113876728	4.208945246574042E-4
20-21	3.445558118518946E-4	3.136076850388502E-4	0.0	1.4442459179420732E-5	0.04266715083291725	4.229577331116072E-4
22-23	4.2502094156581015E-4	3.218605188556621E-4	0.0	1.6505667633623694E-5	0.04698750933601825	4.559690683788546E-4
24-25	4.807275698292901E-4	3.342397695808798E-4	0.0	1.8568876087826656E-5	0.05172669915532246	4.600954852872605E-4
26-27	5.40560615001176E-4	3.3836618648928576E-4	0.0	2.063208454202962E-5	0.05640399272100058	4.88980403646102E-4
28-29	5.632559079974086E-4	3.3836618648928576E-4	0.0	2.063208454202962E-5	0.06095336736251811	5.261181558217554E-4
30-31	5.94204034810453E-4	3.3836618648928576E-4	0.0	3.713775217565331E-5	0.06529023153325272	5.653191164516115E-4
32-33	6.313417869861064E-4	3.3836618648928576E-4	0.0	4.539058599246516E-5	0.06961884287017053	6.540370799823389E-4
34-35	6.953012490663982E-4	3.3836618648928576E-4	0.0	6.395946208029182E-5	0.0734894219302553	6.684795391617597E-4
36-37	7.159333336084278E-4	3.404293949434887E-4	0.0	7.221229589710366E-5	0.07722795564927107	6.891116237037893E-4
38-39	7.510078773298782E-4	3.466190203060976E-4	0.0	7.427550435130663E-5	0.08159576794681873	7.200597505168337E-4
40-41	7.922720464139374E-4	3.5074543721450355E-4	0.0	7.427550435130663E-5	0.0851878138655861	7.365654181504574E-4
42-43	8.005248802307492E-4	3.5899827103131536E-4	0.0	7.427550435130663E-5	0.08875716449135722	7.468814604214722E-4
44-45	8.170305478643728E-4	3.693143133023302E-4	0.0	8.046512971391552E-5	0.09318274662562258	7.530710857840811E-4
46-47	8.582947169484322E-4	3.755039386649391E-4	0.0	8.252833816811847E-5	0.097517547587903	7.5926071114669E-4
48-49	8.974956775782885E-4	3.8375677248175095E-4	0.0	8.459154662232144E-5	0.10161920599485849	7.737031703261107E-4
50-51	9.22254179028724E-4	3.9200960629856275E-4	0.0	8.66547550765244E-5	0.10592305883032586	7.902088379597344E-4
52-53	9.862136411090158E-4	3.961360232069687E-4	0.0	9.284438043913329E-5	0.11007217103172802	8.025880886849522E-4
54-55	0.001033667435555684	3.961360232069687E-4	0.0	9.903400580174217E-5	0.1131958686313913	8.1496733941017E-4
56-57	0.0010728683961855401	4.0438885702378055E-4	0.0	1.0109721425594514E-4	0.11784015086180216	8.273465901353877E-4
58-59	0.0011161957737238024	4.2502094156581015E-4	0.0	1.0522363116435105E-4	0.1223874622948655	8.335362154979966E-4
60-61	0.0011512703174452528	4.33273775382622E-4	0.0	1.0728683961855402E-4	0.12605378371798415	8.355994239521995E-4
62-63	0.0011822184442582973	4.3740019229102794E-4	0.0	1.1141325652695995E-4	0.12964789284520573	8.438522577690114E-4
64-65	0.0012069769457087327	4.3740019229102794E-4	0.0	1.1141325652695995E-4	0.13480178756380473	8.479786746774173E-4
66-67	0.0012358618640675742	4.518426514704487E-4	0.0	1.1347646498116292E-4	0.1387528317536034	8.500418831316203E-4
68-69	0.0013060109515104748	4.704115275582753E-4	0.0	1.1760288188956882E-4	0.14173623117838086	8.809900099446648E-4
70-71	0.0013823496643159845	4.8485398673769604E-4	0.0	1.2791892416058365E-4	0.14469487210170792	8.830532183988677E-4
72-73	0.001409171374220623	4.86917195191899E-4	0.0	1.3617175797739548E-4	0.14784951782818426	8.974956775782884E-4
74-75	0.0014318666672168555	4.86917195191899E-4	0.0	1.3617175797739548E-4	0.15120223156626406	8.995588860324914E-4
76-77	0.0014710676278467119	4.992964459171168E-4	0.0	1.4029817488580141E-4	0.15368014491976184	8.995588860324914E-4
78-79	0.001516458213839177	5.034228628255227E-4	0.0	1.6505667633623695E-4	0.15632930457495842	9.036853029408973E-4
80-81	0.0015370902983812065	5.075492797339287E-4	0.0	1.6918309324464288E-4	0.15927556624756026	9.098749283035062E-4
82-83	0.00157422805055686	5.178653220049435E-4	0.0	1.7330951015304878E-4	0.16222801754552468	9.119381367577092E-4
84-85	0.0016629460140875872	5.199285304591465E-4	0.0	1.7743592706145471E-4	0.16471624694129344	9.119381367577092E-4
86-87	0.0017599168114351266	5.199285304591465E-4	0.0	1.8156234396986065E-4	0.16694038565492425	9.119381367577092E-4
88-89	0.0018114970227902005	5.199285304591465E-4	0.0	1.8156234396986065E-4	0.16936878200552113	9.160645536661151E-4
90-91	0.0018527611918742598	5.302445727301612E-4	0.0	1.8156234396986065E-4	0.1723212333034856	9.160645536661151E-4
92-93	0.001896088569412522	5.343709896385671E-4	0.0	1.8568876087826658E-4	0.1751849666379193	9.20190970574521E-4
94-95	0.0019641744484012198	5.40560615001176E-4	0.0	1.8568876087826658E-4	0.17833342273903302	9.263805959371299E-4
96-97	0.0020446395781151356	5.446870319095819E-4	0.0	1.8775196933246954E-4	0.18092068614060353	9.284438043913329E-4
98-99	0.0020982829979244123	5.611926995432057E-4	0.0	1.9187838624087547E-4	0.183060233307612	9.284438043913329E-4
100-101	0.00216636887691311	5.653191164516116E-4	0.0	1.939415946950784E-4	0.18535452110868572	9.284438043913329E-4
102-103	0.002220012296722387	5.653191164516116E-4	0.0	1.939415946950784E-4	0.18733520122472053	9.284438043913329E-4
104-105	0.0022654028827148523	5.653191164516116E-4	0.0	1.939415946950784E-4	0.1891920888335032	9.305070128455358E-4
106-107	0.0023231727194325353	5.818247840852353E-4	0.0	2.001312200576873E-4	0.19087566693213281	9.325702212997388E-4
108-109	0.002434585975959495	5.818247840852353E-4	0.0	2.063208454202962E-4	0.19268922716337722	9.325702212997388E-4
110-111	0.0025026718549481927	5.880144094478441E-4	0.0	2.063208454202962E-4	0.19435629959437323	9.325702212997388E-4
112-113	0.002558378483211673	5.96267243264656E-4	0.0	2.063208454202962E-4	0.19611208998889995	9.346334297539418E-4
114-115	0.002609958694566747	6.024568686272649E-4	0.0	2.0838405387449914E-4	0.1982413211136374	9.366966382081447E-4
116-117	0.002651222863650806	6.168993278066856E-4	0.0	2.104472623287021E-4	0.20003837567724816	9.366966382081447E-4
118-119	0.0027420040356357367	6.375314123487153E-4	0.0	2.1251047078290507E-4	0.20155070747417897	9.366966382081447E-4
120-121	0.002871986168250523	6.519738715281359E-4	0.0	2.1870009614551397E-4	0.203005269434392	9.408230551165507E-4
122-123	0.0030411692614951656	6.519738715281359E-4	0.0	2.2488972150812287E-4	0.20442888326779207	9.408230551165507E-4
124-125	0.003154645726476329	6.561002884365419E-4	0.0	2.269529299623258E-4	0.20585868672655472	9.408230551165507E-4
126-127	0.003206225937831403	6.561002884365419E-4	0.0	2.269529299623258E-4	0.20735244964739769	9.408230551165507E-4
128-129	0.0032536797322780713	6.561002884365419E-4	0.0	2.269529299623258E-4	0.20870797760180904	9.408230551165507E-4
130-131	0.0033362080704461895	6.561002884365419E-4	0.0	2.331425553249347E-4	0.20990670171370093	9.490758889333625E-4
132-133	0.0034538109523357583	6.664163307075567E-4	0.0	2.372689722333406E-4	0.21109510978332185	9.490758889333625E-4
134-135	0.003680763882298084	6.684795391617597E-4	0.0	2.3933218068754357E-4	0.21214115646960274	9.532023058417684E-4
136-137	0.003880895102355771	7.0355408288321E-4	0.0	2.3933218068754357E-4	0.21320370882351727	9.573287227501743E-4
138-139	0.0039427913559818605	7.179965420626307E-4	0.0	2.3933218068754357E-4	0.2144746452313063	9.573287227501743E-4
>>END_MODULE
