##FastQC	0.12.1
>>Basic Statistics	pass
#Measure	Value
Filename	SnRK1a1OE.control.2d.S.2.R2.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22339575
Total Bases	3.3 Gbp
Sequences flagged as poor quality	0
Sequence length	150
%GC	46
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	35.72480394098813	37.0	35.0	38.0	33.0	39.0
2	35.2109524912627	35.0	34.0	37.0	33.0	39.0
3	35.403528760059224	35.0	34.0	37.0	33.0	39.0
4	35.4645005556283	36.0	35.0	37.0	33.0	39.0
5	35.40342651997632	36.0	35.0	37.0	33.0	39.0
6	35.327136169779415	35.0	34.0	37.0	33.0	39.0
7	35.39338877306305	35.0	34.0	37.0	33.0	39.0
8	35.479231095488615	36.0	34.0	38.0	33.0	39.0
9	35.490584265815265	36.0	34.0	38.0	33.0	39.0
10-14	35.46747192818127	35.8	34.4	37.8	33.0	39.0
15-19	35.43804940783341	36.0	34.0	38.0	33.0	39.0
20-24	35.41101300270932	36.0	34.0	38.0	33.0	39.0
25-29	35.39901763574285	36.0	34.0	38.0	33.0	39.0
30-34	35.385725538646106	36.0	34.0	38.0	33.0	39.0
35-39	35.356190017043744	36.0	34.0	38.0	32.8	39.0
40-44	35.344239324159034	36.0	34.0	38.0	32.2	39.0
45-49	35.31263605507267	36.0	34.0	38.0	32.0	39.0
50-54	35.29433269880917	36.0	34.0	38.0	32.0	39.0
55-59	35.26421935063671	36.0	34.0	38.0	32.0	39.0
60-64	35.22346003449035	36.0	34.0	38.0	32.0	39.0
65-69	35.18585810159773	36.0	34.0	38.0	32.0	39.0
70-74	35.16791177987943	36.0	34.0	38.0	32.0	39.0
75-79	35.10854574449156	35.8	34.0	38.0	32.0	39.0
80-84	35.03564679274338	35.6	34.0	38.0	32.0	39.0
85-89	35.01490677418885	35.2	34.0	38.0	31.8	39.0
90-94	34.96785232485398	35.0	34.0	37.8	31.0	39.0
95-99	34.90136496329943	35.0	34.0	37.2	31.0	39.0
100-104	34.838848617308074	35.0	34.0	37.0	31.0	39.0
105-109	34.77919511897608	35.0	34.0	37.0	31.0	39.0
110-114	34.7094679285528	35.0	34.0	37.0	30.6	39.0
115-119	34.64201292996845	35.0	34.0	37.0	30.0	39.0
120-124	34.56815671739503	35.0	34.0	37.0	30.0	39.0
125-129	34.48600713308109	35.0	34.0	37.0	30.0	39.0
130-134	34.404504105382486	35.0	34.0	37.0	30.0	39.0
135-139	34.318603679792474	35.0	34.0	37.0	29.4	39.0
140-144	34.220505869068674	35.0	34.0	37.0	29.0	39.0
145-149	34.114900395374576	35.0	34.0	37.0	28.8	39.0
150	34.03991311383498	35.0	34.0	37.0	28.0	39.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
19	1.0
20	13.0
21	223.0
22	1665.0
23	7935.0
24	26349.0
25	64837.0
26	134986.0
27	243178.0
28	362397.0
29	476879.0
30	614789.0
31	803204.0
32	1073499.0
33	1499303.0
34	2247247.0
35	3799605.0
36	9122872.0
37	1860591.0
38	2.0
>>END_MODULE
>>Per base sequence content	warn
#Base	G	A	T	C
1	30.95876403014668	20.68799969059392	10.22600520493363	38.12723107432577
2	23.958190789216	27.01513793346561	34.7680875755246	14.258583701793789
3	17.0321682485007	30.817743846962177	29.445609417368058	22.704478487169073
4	21.044733393540387	35.33904293165828	22.497630326449812	21.118593348351524
5	24.755676864935882	35.37822899495626	22.166509434490138	17.69958470561772
6	18.277635093774165	38.74666371226848	23.156049298162564	19.819651895794795
7	19.484063595659272	21.112774079184586	37.266881755807795	22.136280569348344
8	19.76299011955241	23.262828411014983	29.8138527702519	27.160328699180713
9	22.39367132096291	23.21962705199181	29.23649174167369	25.150209885371588
10-14	22.8499960272297	28.786250409866792	25.253589649758336	23.110163913145172
15-19	23.00718791651139	27.842187687097898	26.590125371677843	22.56049902471287
20-24	22.95788595964094	27.654300727285953	26.592432500083685	22.79538081298942
25-29	22.90167471852083	27.351239224560004	26.652324406350616	23.094761650568554
30-34	22.880480044942665	27.00924167089123	26.727505782898735	23.38277250126737
35-39	23.209120137692864	26.70383478647199	26.80625123799356	23.28079383784159
40-44	23.453994088965434	26.231704945147793	26.813543229895824	23.50075773599095
45-49	23.355207070859674	26.065154775773486	26.906361468380663	23.673276684986174
50-54	23.57204130850333	26.02733423556477	26.638515966740783	23.76210848919112
55-59	23.581936540869737	26.068467282837744	26.62351365234119	23.726082523951327
60-64	23.288502131307332	26.015836917219776	26.72555856590826	23.970102385564633
65-69	23.474392865576004	25.905388083703475	26.7452456011361	23.874973449584424
70-74	23.726376173226214	25.829092988564017	26.46107725863182	23.983453579577947
75-79	23.552603843179647	25.953806193716755	26.738520316523477	23.755069646580115
80-84	23.886731354163	26.007381682511514	26.358979731405014	23.74690723192047
85-89	23.62356622493608	26.148845287322526	26.54072293749049	23.6868655502509
90-94	23.56012502475987	25.86149378401335	26.67254860488617	23.90583258634061
95-99	23.675960027672506	25.999587064656215	26.6384067435339	23.686046164137377
100-104	23.909254316610767	25.81050087121174	26.551626877413735	23.728617934763754
105-109	23.755940746410797	25.99424384752172	26.45373692203187	23.79607848403562
110-114	23.799617494961296	26.173496138579182	26.335868967963805	23.69101739849572
115-119	23.990837784514703	26.279416685411427	26.419490075348346	23.310255454725525
120-124	23.971715666032143	26.452692139398355	26.530175260720046	23.04541693384946
125-129	23.97812760538193	26.521235072735266	26.382513543789443	23.11812377809336
130-134	24.15397338579628	26.57469714620802	26.30948350628873	22.96184596170697
135-139	23.911216753228295	26.58410018990961	26.614459764789615	22.890223292072477
140-144	23.937231572221044	26.791501628835825	26.408369899606416	22.862896899336715
145-149	24.147680986448165	27.2666844226878	25.963430261973308	22.622204328890728
150	24.002453045771908	27.318021940882943	25.826623827892874	22.852901185452275
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	1.0
1	2.5
2	10.0
3	13.5
4	22.5
5	29.0
6	16.5
7	11.0
8	12.0
9	11.0
10	7.5
11	7.5
12	11.0
13	10.0
14	19.0
15	38.5
16	60.0
17	115.0
18	203.5
19	331.0
20	521.0
21	763.5
22	1131.0
23	1707.0
24	2716.5
25	4417.5
26	6833.5
27	10441.0
28	15482.5
29	21562.0
30	30161.0
31	43812.0
32	62371.0
33	84881.0
34	116901.0
35	168497.0
36	238492.0
37	321269.5
38	426516.0
39	556421.0
40	713703.5
41	882809.5
42	1059292.5
43	1234038.0
44	1367657.0
45	1467960.0
46	1506423.5
47	1469682.0
48	1426321.0
49	1384495.0
50	1287550.0
51	1145656.5
52	988643.5
53	844400.5
54	716984.5
55	613125.5
56	515186.0
57	409114.5
58	337869.5
59	278292.5
60	209513.0
61	146046.5
62	92178.0
63	55468.0
64	34206.5
65	16807.0
66	8354.5
67	4719.5
68	2785.5
69	1680.5
70	849.0
71	637.5
72	383.0
73	315.0
74	284.0
75	160.0
76	103.0
77	38.0
78	11.0
79	1.0
80	1.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	4.476360897644651E-6
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.025229665291304777
25-29	0.0
30-34	0.0
35-39	0.0
40-44	0.0
45-49	0.0
50-54	8.952721795289303E-7
55-59	0.0
60-64	0.0
65-69	0.0
70-74	0.0
75-79	0.0
80-84	0.04902868563972233
85-89	1.7905443590578605E-6
90-94	0.0
95-99	8.952721795289303E-7
100-104	0.0
105-109	0.0
110-114	0.0
115-119	0.0
120-124	0.0
125-129	0.0
130-134	0.0
135-139	0.0
140-144	0.0
145-149	0.02570595009081417
150	0.0
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
150	2.2339575E7
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Deduplicated Percentage	32.66819473422754
#Duplication Level	Percentage of total
1	23.275247914470548
2	8.20113659620417
3	5.302540720383851
4	3.5191520987075133
5	2.8718546955668782
6	2.250370636105049
7	1.8429230525012892
8	1.5253751988235351
9	1.353799575932673
>10	17.549957057926925
>50	6.086835471997366
>100	13.187868650164717
>500	4.2526035947794565
>1k	6.438124643127763
>5k	1.4382907453800375
>10k+	0.9039193479282913
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
AGAACAATGGCTTCCTCTATGCTCTCTTCCGCTACTATGGTTGCCTCTCC	33949	0.15196797611413826	No Hit
CTTAAACGTTTTACTTTGTGCTGCACTACTCAACCTCAATGGCCGCCTCA	31255	0.13990865985588358	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	PolyA	PolyG
1	2.82010736551613E-4	1.3429082692933953E-5	0.0	0.0	0.0021486532308694324	0.0
2	0.0010653738936394269	3.5810887181157204E-5	0.0	0.0	0.011660920138364315	0.0
3	0.0018532134116248855	3.5810887181157204E-5	0.0	0.0	0.01783382181621629	0.0
4	0.005250771332937176	3.5810887181157204E-5	0.0	0.0	0.026509009235851623	0.0
5	0.005510400265000565	3.5810887181157204E-5	0.0	0.0	0.031638918824552394	0.0
6	0.006763781316341067	3.5810887181157204E-5	0.0	0.0	0.04419511114244564	0.0
7	0.009131776231195087	4.4763608976446505E-5	0.0	0.0	0.058291171609128646	0.0
8	0.018518705033555922	4.4763608976446505E-5	0.0	0.0	0.07313030798482066	0.0
9	0.01919463552910026	4.923996987409116E-5	0.0	0.0	0.08214122247177934	0.0
10-11	0.01996233142304632	4.923996987409116E-5	0.0	0.0	0.15266852659461966	0.0
12-13	0.020640500099039484	4.923996987409116E-5	0.0	0.0	0.18694178380743592	0.0
14-15	0.02350313289308324	4.923996987409116E-5	0.0	0.0	0.20362741905340634	0.0
16-17	0.027209559716333008	5.1478150322913484E-5	0.0	0.0	0.21419610713274534	0.0
18-19	0.03400243737850876	5.819269166938046E-5	0.0	0.0	0.22353603414568093	0.0
20-21	0.03978365747781683	6.490723301584743E-5	0.0	0.0	0.22803925320871143	0.0
22-23	0.041858450753875134	7.609813525995906E-5	2.2381804488223252E-6	0.0	0.23324302275222336	0.0
24-25	0.0472591801768834	8.728903750407069E-5	4.4763608976446505E-6	0.0	0.23849379408516053	0.0
26-27	0.05198174092389851	8.952721795289301E-5	4.4763608976446505E-6	0.0	0.24354984371905017	0.0
28-29	0.0611940916512512	9.400357885053767E-5	4.4763608976446505E-6	4.4763608976446505E-6	0.24872451691672737	0.0
30-31	0.08475989359690146	9.624175929935999E-5	4.4763608976446505E-6	6.714541346466976E-6	0.2538902373926093	0.0
32-33	0.11096227211126443	9.847993974818232E-5	4.4763608976446505E-6	8.952721795289301E-6	0.2576168078398985	0.0
34-35	0.13138790688721697	9.847993974818232E-5	4.4763608976446505E-6	8.952721795289301E-6	0.263265975292726	0.0
36-37	0.1340781997867014	9.847993974818232E-5	8.952721795289301E-6	8.952721795289301E-6	0.2656183029444383	0.0
38-39	0.1365827237089336	9.847993974818232E-5	8.952721795289301E-6	8.952721795289301E-6	0.2672230783262439	0.0
40-41	0.13844265166190495	1.0295630064582697E-4	8.952721795289301E-6	8.952721795289301E-6	0.26889947548241183	0.0
42-43	0.13878285509012595	1.0967084199229395E-4	8.952721795289301E-6	8.952721795289301E-6	0.27030505280427225	0.0
44-45	0.13968260363055252	1.1862356378758325E-4	8.952721795289301E-6	8.952721795289301E-6	0.27168824832164445	0.0
46-47	0.14016605060749815	1.3429082692933953E-4	1.3429082692933953E-5	8.952721795289301E-6	0.27326616553806415	0.0
48-49	0.14110832457645234	1.3429082692933953E-4	1.3429082692933953E-5	8.952721795289301E-6	0.27441211392786125	0.0
50-51	0.1422900838534305	1.3429082692933953E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.27580650034747756	0.0
52-53	0.14373818660381854	1.3429082692933953E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.27700392688759745	0.0
54-55	0.14441635527981173	1.4100536827580648E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.27803348989405574	0.0
56-57	0.1452959601961989	1.4324354872462882E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.2791413892162228	0.0
58-59	0.14546382372986058	1.4771990962227349E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.28001204141081465	0.0
60-61	0.14566973633115224	1.4771990962227349E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.28074168823713075	4.4763608976446505E-6
62-63	0.14592936526321562	1.4771990962227349E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.2816906767474314	4.4763608976446505E-6
64-65	0.14595398524815267	1.5219627051991813E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.28267547614491323	4.4763608976446505E-6
66-67	0.14606141790969612	1.7010171411049673E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.2833267866555206	4.4763608976446505E-6
68-69	0.14611513424046785	1.7457807500814138E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.2839490008202932	4.4763608976446505E-6
70-71	0.1462785214132319	1.7457807500814138E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.2846696949248139	8.952721795289301E-6
72-73	0.1463501431875942	1.7905443590578602E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.2851867146084919	1.7905443590578602E-5
74-75	0.1463881922552242	1.835307968034307E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.28584473966044566	2.0143624039400927E-5
76-77	0.14641057405971242	1.947216990475423E-4	1.3429082692933953E-5	1.3429082692933953E-5	0.2866437700806752	2.461998493704558E-5
78-79	0.14645533766868885	2.0591260129165394E-4	1.3429082692933953E-5	1.7905443590578602E-5	0.2878076239140628	2.6858165385867906E-5
80-81	0.14650457763856295	2.0815078174047627E-4	1.3429082692933953E-5	1.7905443590578602E-5	0.2887140869958359	3.133452628351255E-5
82-83	0.14651576854080706	2.193416839845879E-4	1.3429082692933953E-5	1.7905443590578602E-5	0.28948849743112837	3.5810887181157204E-5
84-85	0.14655381760843705	2.2381804488223254E-4	1.5667263141756277E-5	1.7905443590578602E-5	0.2903927223324526	3.8049067629979526E-5
86-87	0.14660305757831113	2.2605622533105485E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2912879945119815	4.0287248078801854E-5
88-89	0.1466590120895317	2.2829440577987718E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.29214521762388046	4.0287248078801854E-5
90-91	0.14667467935267348	2.3277076667752185E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2927159536383302	4.0287248078801854E-5
92-93	0.1466970611571617	2.372471275751665E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2931882097130317	4.0287248078801854E-5
94-95	0.14677092111197282	2.372471275751665E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2937813275319696	4.0287248078801854E-5
96-97	0.14678435019466574	2.394853080239888E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2943520635464193	4.0287248078801854E-5
98-99	0.14680225563825633	2.4396166892163347E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2949026559368296	4.252542852762418E-5
100-101	0.14684701924723276	2.461998493704558E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2954151992596099	4.4763608976446505E-5
102-103	0.14686492469082335	2.461998493704558E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2959366953041855	4.4763608976446505E-5
104-105	0.14689625921710686	2.4843802981927815E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.29648281133369814	4.923996987409116E-5
106-107	0.14690968829979978	2.506762102681004E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2968968747167303	4.923996987409116E-5
108-109	0.14694326100653213	2.551525711657451E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2973982271372665	4.923996987409116E-5
110-111	0.14699473915685504	2.6186711251221205E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.297845863227031	5.371633077173581E-5
112-113	0.1470283118635874	2.708198343075014E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2984210756023783	5.595451122055814E-5
114-115	0.1470395027658315	2.7753437565396834E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2989134753011192	5.819269166938046E-5
116-117	0.1470506936680756	2.797725561027907E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2994148277216554	6.0430872118202785E-5
118-119	0.1470596463898709	2.82010736551613E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.2999072274203963	6.26690525670251E-5
120-121	0.14706636093121736	2.82010736551613E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.3004488670890113	6.26690525670251E-5
122-123	0.1470887427357056	2.82010736551613E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.3008853122765317	6.26690525670251E-5
124-125	0.14711783908154027	2.82010736551613E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.30147619191502073	6.938359391349209E-5
126-127	0.14715141178827262	2.8648709744925763E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.30208497699710046	7.833631570878139E-5
128-129	0.14717603177320965	2.8872527789807997E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.3027720983948889	8.505085705524837E-5
130-131	0.14719841357769786	2.9320163879572464E-4	1.7905443590578602E-5	2.2381804488223252E-5	0.3034771252362679	8.505085705524837E-5
132-133	0.14721855720173727	2.999161801421916E-4	1.7905443590578602E-5	2.461998493704558E-5	0.3041172448446311	8.505085705524837E-5
134-135	0.14723870082577667	2.999161801421916E-4	2.2381804488223252E-5	2.6858165385867906E-5	0.30465888451324613	8.505085705524837E-5
136-137	0.14726108263026488	3.0439254103983626E-4	2.2381804488223252E-5	2.6858165385867906E-5	0.3052050005427588	8.505085705524837E-5
138-139	0.14727898807385548	3.0886890193748093E-4	2.2381804488223252E-5	2.6858165385867906E-5	0.3058294528879802	8.505085705524837E-5
>>END_MODULE
