##FastQC	0.12.1
>>Basic Statistics	pass
#Measure	Value
Filename	SnRK1a1OE.lowPi.2d.S.3.R2.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24094736
Total Bases	3.6 Gbp
Sequences flagged as poor quality	0
Sequence length	150
%GC	46
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	35.84501137509869	37.0	35.0	38.0	33.0	39.0
2	35.402669280128244	35.0	34.0	37.0	33.0	39.0
3	35.550954739657655	35.0	35.0	38.0	33.0	39.0
4	35.620513625880776	36.0	35.0	38.0	33.0	39.0
5	35.53240400724872	36.0	35.0	38.0	33.0	39.0
6	35.4777899205868	35.0	35.0	37.0	33.0	39.0
7	35.51079044817092	35.0	34.0	38.0	33.0	39.0
8	35.63057420508778	36.0	35.0	38.0	33.0	39.0
9	35.609625604530386	36.0	35.0	38.0	33.0	39.0
10-14	35.58662712054617	35.8	35.0	37.8	33.0	39.0
15-19	35.56163580294053	36.0	35.0	38.0	33.0	39.0
20-24	35.55518631953469	36.0	35.0	38.0	33.0	39.0
25-29	35.53802934383676	36.0	35.0	38.0	33.0	39.0
30-34	35.524338245498924	36.0	35.0	38.0	33.0	39.0
35-39	35.49475910422923	36.0	35.0	38.0	33.0	39.0
40-44	35.48489399510333	36.0	34.8	38.0	33.0	39.0
45-49	35.4538898620844	36.0	34.0	38.0	33.0	39.0
50-54	35.43679953164873	36.0	34.0	38.0	33.0	39.0
55-59	35.411853701156964	36.0	34.0	38.0	33.0	39.0
60-64	35.37207248919432	36.0	34.0	38.0	32.0	39.0
65-69	35.345583101636805	36.0	34.0	38.0	32.0	39.0
70-74	35.31750267776331	36.0	34.0	38.0	32.0	39.0
75-79	35.26839009981267	36.0	34.0	38.0	32.0	39.0
80-84	35.229226059999164	36.0	34.0	38.0	32.0	39.0
85-89	35.18215464987871	36.0	34.0	38.0	32.0	39.0
90-94	35.13193168831565	36.0	34.0	38.0	32.0	39.0
95-99	35.06654845274088	35.8	34.0	38.0	32.0	39.0
100-104	35.0214842030226	35.8	34.0	38.0	31.8	39.0
105-109	34.963791792530955	35.4	34.0	38.0	31.0	39.0
110-114	34.89212300977275	35.0	34.0	37.8	31.0	39.0
115-119	34.82027283469718	35.0	34.0	37.2	31.0	39.0
120-124	34.74934275270748	35.0	34.0	37.0	31.0	39.0
125-129	34.6741063193222	35.0	34.0	37.0	30.0	39.0
130-134	34.571631936535844	35.0	34.0	37.0	30.0	39.0
135-139	34.51843721383791	35.0	34.0	37.0	30.0	39.0
140-144	34.3977107281856	35.0	34.0	37.0	30.0	39.0
145-149	34.31983786002054	35.0	34.0	37.0	29.2	39.0
150	34.26031768930774	35.0	34.0	37.0	29.0	39.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
20	20.0
21	257.0
22	1989.0
23	9530.0
24	30837.0
25	72557.0
26	140690.0
27	237867.0
28	348103.0
29	458678.0
30	592745.0
31	775854.0
32	1047066.0
33	1473350.0
34	2224302.0
35	3806013.0
36	1.0433921E7
37	2440952.0
38	5.0
>>END_MODULE
>>Per base sequence content	warn
#Base	G	A	T	C
1	32.37402144601211	18.162821954139694	15.4060704379579	34.0570861618903
2	23.0788957388867	25.20944823798858	33.99211761440341	17.71953840872131
3	19.698049399669703	28.82598091134927	30.190756188405633	21.285213500575395
4	23.31957901510106	33.919944173698354	21.578514078759774	21.181962732440812
5	25.554282893989793	34.75475307137626	21.84273361617243	17.848230418461526
6	19.093618622756438	38.67175386358249	22.17735857325849	20.057268940402583
7	20.216303677284532	20.067549194147634	37.49643075566381	22.219716372904024
8	21.547154532010644	22.997836539898174	28.32846145315724	27.126547474933943
9	23.433994047496515	23.018330642842486	28.016957728858287	25.53071758080271
10-14	22.988869436046112	28.4857231886666	25.474746849270314	23.05066052601697
15-19	23.09730224892275	27.63241813481584	26.80976790947201	22.460511706789397
20-24	22.950124043691535	27.562098210995135	26.7462826735267	22.741495071786634
25-29	23.054459696092955	27.15558701286455	26.70656113434901	23.083392156693478
30-34	22.95025519266947	26.891976737159517	26.876683770264176	23.281084299906833
35-39	23.301686310238054	26.69727030833623	26.8692373305107	23.13180605091502
40-44	23.49745936207809	26.317455397726707	26.85377752219406	23.331307718001142
45-49	23.402540704326455	26.088864389300635	26.99519264290756	23.51340226346535
50-54	23.580843550226074	26.117032367567756	26.727163974737056	23.574960107469117
55-59	23.618583743768763	26.083277276829264	26.78006515614033	23.518073823261645
60-64	23.257617763481615	25.99046032295187	26.922625755268704	23.829296158297815
65-69	23.46404893968582	25.89622003657745	26.937101339787255	23.70262968394947
70-74	23.634045408375055	25.865243145766303	26.66385244199275	23.8368590038659
75-79	23.508065828154333	25.943243370668185	26.926335279207876	23.622355521969613
80-84	23.83276247558803	25.97425678372239	26.574560518114826	23.618420222574755
85-89	23.529936995366953	26.101769282718017	26.792520158759984	23.57577356315504
90-94	23.555530137371083	25.812334279155415	26.840498273149787	23.791637310323715
95-99	23.592182956476467	25.966539745444816	26.92009159179001	23.521185706288712
100-104	23.837832462659065	25.727436067363428	26.81231120357575	23.622420266401754
105-109	23.655267471328738	26.016870456824016	26.6432271898993	23.684634881947947
110-114	23.731587679566193	26.092331536647674	26.58860507954933	23.58747570423681
115-119	23.889233731384316	26.21768837807561	26.737943922689173	23.1551339678509
120-124	23.84505976741144	26.403337226853203	26.83519005977073	22.91641294596463
125-129	23.886622769166223	26.41387855694088	26.637489228144922	23.062009445747975
130-134	24.050230578558608	26.446669335787735	26.640932063123152	22.862168022530508
135-139	23.85235035447037	26.47696265671442	26.90473659395759	22.76595039485762
140-144	23.876225080864135	26.640062792138497	26.665045012321364	22.818667114676003
145-149	24.014367287527037	27.249948702488382	26.15596618282101	22.579717827163577
150	23.84984421493558	27.206668709713195	26.07334647700643	22.8701405983448
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.5
8	1.0
9	1.0
10	1.5
11	2.5
12	7.5
13	11.5
14	12.5
15	23.5
16	45.0
17	88.5
18	165.5
19	258.5
20	388.0
21	628.5
22	994.0
23	1544.0
24	2500.0
25	4142.0
26	6600.5
27	10254.0
28	15592.5
29	22308.0
30	32057.5
31	46721.5
32	67940.5
33	93426.0
34	126316.0
35	181934.5
36	258912.0
37	346261.0
38	455194.0
39	597651.5
40	773663.5
41	961220.0
42	1152758.5
43	1339535.0
44	1484871.0
45	1588154.5
46	1618619.0
47	1579820.0
48	1541385.5
49	1501952.0
50	1392531.5
51	1230357.5
52	1066748.5
53	904668.0
54	755174.0
55	644156.5
56	537997.5
57	434871.0
58	366470.5
59	307827.5
60	240312.5
61	164958.0
62	100718.0
63	61002.0
64	37290.0
65	16934.5
66	8607.5
67	4581.5
68	2263.0
69	1220.5
70	647.0
71	468.5
72	305.0
73	224.5
74	184.0
75	128.0
76	82.0
77	27.5
78	9.0
79	2.5
80	2.5
81	1.5
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	0.0
25-29	0.0
30-34	0.0
35-39	0.0
40-44	0.0
45-49	0.0
50-54	0.0
55-59	0.0
60-64	0.0
65-69	8.300568223698321E-7
70-74	8.300568223698321E-7
75-79	0.0
80-84	0.0
85-89	0.0
90-94	0.0
95-99	0.0
100-104	0.0
105-109	8.300568223698321E-7
110-114	0.0
115-119	0.0
120-124	0.0
125-129	1.6601136447396643E-6
130-134	0.051469333384686185
135-139	8.300568223698321E-7
140-144	0.0
145-149	0.0
150	0.0
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
150	2.4094736E7
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Deduplicated Percentage	33.42043104385345
#Duplication Level	Percentage of total
1	24.18274730665572
2	8.157390114042927
3	5.147445919000579
4	3.615614581614912
5	2.7085486112551185
6	2.164768063995564
7	1.810440495732165
8	1.5308804231710436
9	1.2779406635754418
>10	16.632166740071312
>50	6.042130166437826
>100	13.214309746606004
>500	4.746984647737369
>1k	6.766966628980386
>5k	0.9112504902463452
>10k+	1.0904154008772198
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
AGAACAATGGCTTCCTCTATGCTCTCTTCCGCTACTATGGTTGCCTCTCC	29959	0.12433836170688901	No Hit
CTTAAACGTTTTACTTTGTGCTGCACTACTCAACCTCAATGGCCGCCTCA	29834	0.12381957619290786	No Hit
CAAATCTTAAACGTTTTACTTTGTGCTGCACTACTCAACCTCAATGGCCG	28420	0.11795107445875315	No Hit
GAACAATGGCTTCCTCTATGCTCTCTTCCGCTACTATGGTTGCCTCTCCG	25100	0.10417213120741393	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	PolyA	PolyG
1	2.863696037175921E-4	4.150284111849161E-6	0.0	0.0	0.0019215815437861614	0.0
2	0.0012326343812192008	1.6601136447396644E-5	0.0	0.0	0.009898427606760248	0.0
3	0.0020336392148060886	1.6601136447396644E-5	0.0	0.0	0.014828965131637051	0.0
4	0.005299912810831378	1.6601136447396644E-5	0.0	0.0	0.022772608921716345	0.0
5	0.0055281784369830824	1.6601136447396644E-5	0.0	0.0	0.027757100140047185	0.0
6	0.0066985585565245455	1.6601136447396644E-5	0.0	0.0	0.035439276031079985	0.0
7	0.008931411408699394	2.0751420559245803E-5	0.0	0.0	0.04834665961893087	0.0
8	0.01780886912394475	2.9051988782944127E-5	0.0	0.0	0.06596876595784242	0.0
9	0.01859327282108424	2.9051988782944127E-5	0.0	0.0	0.07874749073822597	0.0
10-11	0.019415029075230374	3.320227289479329E-5	0.0	0.0	0.1294701880111905	0.0
12-13	0.020278288170495	3.320227289479329E-5	0.0	0.0	0.15297117179453637	0.0
14-15	0.02354041148240844	3.320227289479329E-5	0.0	0.0	0.16316634471529384	0.0
16-17	0.02746865539427367	3.320227289479329E-5	0.0	0.0	0.1705434747241057	0.0
18-19	0.03665323413379586	3.942769906256703E-5	0.0	0.0	0.17868840729360969	0.0
20-21	0.044086392978117714	4.772826728626535E-5	0.0	0.0	0.18358989282970356	0.0
22-23	0.04724060890312307	6.225426167773741E-5	4.150284111849161E-6	0.0	0.18877567282745908	0.0
24-25	0.05516142613058719	6.225426167773741E-5	4.150284111849161E-6	0.0	0.19408181106445824	0.0
26-27	0.06213182829643786	6.225426167773741E-5	4.150284111849161E-6	0.0	0.19816361548846187	0.0
28-29	0.07823078036630075	6.225426167773741E-5	8.300568223698322E-6	0.0	0.2020835588321034	0.0
30-31	0.10962975481449558	6.4329403733662E-5	1.6601136447396644E-5	0.0	0.20625874464862365	0.0
32-33	0.13324279626886137	7.055482990143573E-5	1.6601136447396644E-5	0.0	0.20927807633999393	0.0
34-35	0.149540961976093	7.47051140132849E-5	1.6601136447396644E-5	0.0	0.21263358104442398	0.0
36-37	0.1516493063049124	7.47051140132849E-5	2.4901704671094965E-5	0.0	0.21458213943493715	0.0
38-39	0.15367879523560665	7.47051140132849E-5	3.1127130838868706E-5	0.0	0.21604926486847584	4.150284111849161E-6
40-41	0.15519572407848753	7.47051140132849E-5	3.735255700664245E-5	0.0	0.21746658689267234	4.150284111849161E-6
42-43	0.15553604737565915	7.47051140132849E-5	3.735255700664245E-5	0.0	0.21890051005331623	4.150284111849161E-6
44-45	0.15658191897184515	7.678025606920948E-5	3.735255700664245E-5	0.0	0.22018502298593354	4.150284111849161E-6
46-47	0.15832918858293363	8.300568223698321E-5	3.735255700664245E-5	0.0	0.22149651276527788	4.150284111849161E-6
48-49	0.1597112331921794	8.715596634883238E-5	3.735255700664245E-5	0.0	0.22262954032781268	4.150284111849161E-6
50-51	0.16089406416405644	8.715596634883238E-5	3.735255700664245E-5	0.0	0.22379369502118637	4.150284111849161E-6
52-53	0.16207066970976564	8.715596634883238E-5	3.735255700664245E-5	0.0	0.22496822542483969	8.300568223698322E-6
54-55	0.16257492922935532	8.715596634883238E-5	3.735255700664245E-5	0.0	0.22607220099859154	1.2450852335547482E-5
56-57	0.16330122894892893	9.130625046068154E-5	3.942769906256703E-5	0.0	0.22706619404337944	1.2450852335547482E-5
58-59	0.1634838414498503	9.338139251660612E-5	4.565312523034077E-5	0.0	0.22790455143397298	1.2450852335547482E-5
60-61	0.16379926304235082	1.0998252896400276E-4	4.565312523034077E-5	0.0	0.2286495274320499	1.2450852335547482E-5
62-63	0.16408978293018028	1.2450852335547482E-4	4.565312523034077E-5	0.0	0.22953768823198561	1.6601136447396644E-5
64-65	0.16413751119746653	1.3488423363509772E-4	4.980340934218993E-5	0.0	0.23039679704313837	1.6601136447396644E-5
66-67	0.16421429145353575	1.4318480185879603E-4	4.980340934218993E-5	0.0	0.23113139733093568	1.6601136447396644E-5
68-69	0.164262019720822	1.4733508597064522E-4	4.980340934218993E-5	0.0	0.231865997618733	1.6601136447396644E-5
70-71	0.16442803108529597	1.494102280265698E-4	4.980340934218993E-5	0.0	0.23256117020746772	1.6601136447396644E-5
72-73	0.16450896162547704	1.597859383061927E-4	4.980340934218993E-5	0.0	0.23303430259621855	1.6601136447396644E-5
74-75	0.16453593847220405	1.6186108036211726E-4	5.3953693454039095E-5	0.0	0.23369419777000255	1.6601136447396644E-5
76-77	0.16458366673949032	1.6601136447396642E-4	6.225426167773741E-5	0.0	0.23438522007462542	2.0751420559245803E-5
78-79	0.16465214642733583	1.7846221680951392E-4	6.4329403733662E-5	0.0	0.23522772774933082	2.0751420559245803E-5
80-81	0.1647247763992932	1.7846221680951392E-4	6.640454578958658E-5	2.0751420559245805E-6	0.23591044948572998	2.2826562615170382E-5
82-83	0.16475382838807612	1.8261250092136308E-4	7.678025606920948E-5	4.150284111849161E-6	0.2365890209380173	2.4901704671094965E-5
84-85	0.1647766549506913	1.8261250092136308E-4	7.885539812513406E-5	4.150284111849161E-6	0.23732569636787054	2.4901704671094965E-5
86-87	0.16479740637125057	1.8261250092136308E-4	8.300568223698322E-5	4.150284111849161E-6	0.23797314068931902	2.6976846727019547E-5
88-89	0.16483890921236904	1.8468764297728765E-4	8.715596634883238E-5	4.150284111849161E-6	0.2387492438182348	2.9051988782944127E-5
90-91	0.16485966063292828	2.1581477381615635E-4	8.715596634883238E-5	4.150284111849161E-6	0.23926180390604818	2.9051988782944127E-5
92-93	0.16486381091704014	2.2826562615170385E-4	8.715596634883238E-5	4.150284111849161E-6	0.2397266357265753	3.1127130838868706E-5
94-95	0.16490531375815864	2.3241591026355299E-4	8.715596634883238E-5	4.150284111849161E-6	0.2403844557583034	3.735255700664245E-5
96-97	0.16491568946843826	2.4071647848725132E-4	8.715596634883238E-5	4.150284111849161E-6	0.24100907351713668	3.942769906256703E-5
98-99	0.16493851603105342	2.448667625991005E-4	8.715596634883238E-5	8.300568223698322E-6	0.24150918275261452	4.1502841118491606E-5
100-101	0.16496756801983636	2.469419046550251E-4	8.715596634883238E-5	8.300568223698322E-6	0.24201136713014826	4.1502841118491606E-5
102-103	0.1649800188721719	2.4901704671094965E-4	9.130625046068153E-5	8.300568223698322E-6	0.24254675378057683	4.1502841118491606E-5
104-105	0.1649883194403956	2.4901704671094965E-4	9.54565345725307E-5	8.300568223698322E-6	0.24309044099922905	4.1502841118491606E-5
106-107	0.16502359685534634	2.6976846727019545E-4	9.54565345725307E-5	8.300568223698322E-6	0.24356979881414761	4.1502841118491606E-5
108-109	0.1650464234179615	2.7391875138204464E-4	9.54565345725307E-5	8.300568223698322E-6	0.24405538205523397	4.1502841118491606E-5
110-111	0.16507755054880036	2.8636960371759205E-4	9.54565345725307E-5	8.300568223698322E-6	0.24459699413183028	4.1502841118491606E-5
112-113	0.16509000140113592	2.9467017194129044E-4	9.54565345725307E-5	8.300568223698322E-6	0.24513445592431476	4.1502841118491606E-5
114-115	0.16509000140113592	2.96745313997215E-4	9.54565345725307E-5	8.300568223698322E-6	0.2456283397336248	4.357798317441619E-5
116-117	0.16510037711141556	2.988204560531396E-4	9.54565345725307E-5	8.300568223698322E-6	0.24614089982143816	4.565312523034077E-5
118-119	0.1651066025375833	3.029707401649887E-4	9.54565345725307E-5	8.300568223698322E-6	0.24662648306252455	4.565312523034077E-5
120-121	0.165114903105807	3.071210242768379E-4	9.54565345725307E-5	8.300568223698322E-6	0.24709961545127535	4.565312523034077E-5
122-123	0.16511905338991886	3.091961663327625E-4	9.54565345725307E-5	8.300568223698322E-6	0.24756444727180243	4.772826728626535E-5
124-125	0.16512735395814254	3.1334645044461167E-4	9.960681868437986E-5	1.0375710279622903E-5	0.24805418079700065	4.980340934218993E-5
126-127	0.16513565452636625	3.195718766123854E-4	9.960681868437986E-5	1.2450852335547482E-5	0.2485895674474292	5.395369345403909E-5
128-129	0.16513772966842216	3.237221607242345E-4	9.960681868437986E-5	1.2450852335547482E-5	0.24924116205298952	5.602883550996367E-5
130-131	0.16515225566281366	3.382481551157066E-4	9.960681868437986E-5	1.2450852335547482E-5	0.24987823066415837	5.810397756588825E-5
132-133	0.1651813076515966	3.4447358128348037E-4	9.960681868437986E-5	1.2450852335547482E-5	0.25043229359309016	5.810397756588825E-5
134-135	0.16519583364598805	3.506990074512541E-4	9.960681868437986E-5	1.2450852335547482E-5	0.2509905068061339	5.810397756588825E-5
136-137	0.16520828449832362	3.5277414950717864E-4	9.960681868437986E-5	1.2450852335547482E-5	0.25153419402478616	5.810397756588825E-5
138-139	0.16522903591888288	3.6730014389865074E-4	9.960681868437986E-5	1.4525994391472063E-5	0.25206750553315876	6.017911962181283E-5
>>END_MODULE
