FastQCFastQC Report
Tue 31 Mar 2026
A_Ctrl_1_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameA_Ctrl_1_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22061723
Total Bases3.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGAATCTTGGGGGCTTGTAGGCGATGAAACTGATGCACTGCACTTGAC369610.1675345121502976No Hit
GGGAAATTTGGTTGAAACCACCCAAGTGATGAAGCTTTAAAAAAAGGCAA357680.16212695626719636No Hit
GGAAATTTGGTTGAAACCACCCAAGTGATGAAGCTTTAAAAAAAGGCAAA253390.11485503648105816No Hit
GCCACACCTTCATGCACTGAACTCTTCCACCATTGCTAGCCAAAGTGGTG237980.10787008793465497No Hit
GTGGGATTCAACAGACAAACCAAAACGTAAAATGGAAAAATAAGAAAAAA233740.10594820721844798No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)