FastQCFastQC Report
Tue 31 Mar 2026
A_Ctrl_1_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameA_Ctrl_1_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22061723
Total Bases3.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAACCCTCGG786450.3564771436936272No Hit
GCAAGAGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAAC442400.20052830869103014No Hit
CAGCAAGAGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTA317150.14375577102477444No Hit
AGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAACCCTCG287550.13033886791163138No Hit
CAAAAACAAGAAGAAAAATGGGCAGCACCACTGCATTCACCTCCCCATTT276420.12529393103158806No Hit
CTTCACTTCATTTCATACCCATTTCAACTTCTTTCTGAATCATTCCAATG261760.11864893780055166No Hit
AAAAAAAAGAGGCATCAAATGGCTTCATCCATTCTCTCATCCGCCGCTGT235700.1068366237759399No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)