FastQCFastQC Report
Tue 31 Mar 2026
A_Ctrl_3_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameA_Ctrl_3_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21084883
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAACCCTCGG712330.33783919977170374No Hit
GCAAGAGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAAC563430.26721988450208617No Hit
CAGCAAGAGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTA491420.233067454061756No Hit
AGCTTCTTCAAACTACTCTACTAGCTATTAGTAAATCCTTCTAACCCTCG324630.1539633869440964No Hit
CAAATGGCTTCATCCATTCTCTCATCCGCCGCTGTTGCCTCTGTCAACAG287490.1363488713691226No Hit
CGCTACTGGACCATGTGGAAGCTGCCCATGTTTGGCTGCACCGATTCATC274070.12998412179949018No Hit
AAAAAAAAGAGGCATCAAATGGCTTCATCCATTCTCTCATCCGCCGCTGT250930.11900943438955768No Hit
CCACAGGTCACCAGGATACTACGATGGACGCTACTGGACCATGTGGAAGC220210.10443975430169568No Hit
GTTCGAGACTCTTTCTTACCTTCCTGATATGAGTAACGAGCAATTGGGAA214270.10162257006595674No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)