FastQCFastQC Report
Sat 1 Aug 2026
Wt47.2S.3.R1.clean.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameWt47.2S.3.R1.clean.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21522026
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length96-150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAAGTAAGAGAGGGTCTCGAACCTGAGGTTGTTGTATGGCTCCCACAC277220.1288075760153807No Hit
GTGAAGGTGGTGGCGTAGGCCCAGGCGTTGTTGGCAACGGGGTCAGCCAA249050.11571865957229119No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)