BLASTN 2.6.0+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: /home/jforment/biovice/data/Solanum_chilense/Stam_et_al_2019/Solanum
_chilense.cds.fa
25,885 sequences; 29,273,628 total letters
Query= SL2.50ch06:34762015..34764430
Length=2416
***** No hits found *****
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68355477020
Database: /home/jforment/biovice/data/Solanum_chilense/Stam_et_al_2019/Solanum
_chilense.cds.fa
Posted date: Feb 4, 2020 11:55 AM
Number of letters in database: 29,273,628
Number of sequences in database: 25,885
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5