5X.1:Total read pairs processed: 25,412,445 5X.1- Read 1 with adapter: 734,566 (2.9%) 5X.1- Read 2 with adapter: 673,357 (2.6%) 5X.1-Pairs that were too short: 995,191 (3.9%) 5X.1-Pairs with too many N: 0 (0.0%) 5X.1-Pairs written (passing filters): 24,417,254 (96.1%) -- 5X.2:Total read pairs processed: 25,337,876 5X.2- Read 1 with adapter: 730,332 (2.9%) 5X.2- Read 2 with adapter: 662,496 (2.6%) 5X.2-Pairs that were too short: 1,046,302 (4.1%) 5X.2-Pairs with too many N: 0 (0.0%) 5X.2-Pairs written (passing filters): 24,291,574 (95.9%) -- 5X.3:Total read pairs processed: 25,340,408 5X.3- Read 1 with adapter: 736,425 (2.9%) 5X.3- Read 2 with adapter: 686,568 (2.7%) 5X.3-Pairs that were too short: 877,527 (3.5%) 5X.3-Pairs with too many N: 0 (0.0%) 5X.3-Pairs written (passing filters): 24,462,881 (96.5%) -- Ler.1:Total read pairs processed: 25,329,602 Ler.1- Read 1 with adapter: 727,650 (2.9%) Ler.1- Read 2 with adapter: 682,238 (2.7%) Ler.1-Pairs that were too short: 875,584 (3.5%) Ler.1-Pairs with too many N: 0 (0.0%) Ler.1-Pairs written (passing filters): 24,454,018 (96.5%) -- Ler.2:Total read pairs processed: 25,466,584 Ler.2- Read 1 with adapter: 713,954 (2.8%) Ler.2- Read 2 with adapter: 691,429 (2.7%) Ler.2-Pairs that were too short: 831,629 (3.3%) Ler.2-Pairs with too many N: 0 (0.0%) Ler.2-Pairs written (passing filters): 24,634,955 (96.7%) -- Ler.3:Total read pairs processed: 25,488,885 Ler.3- Read 1 with adapter: 724,722 (2.8%) Ler.3- Read 2 with adapter: 669,581 (2.6%) Ler.3-Pairs that were too short: 917,150 (3.6%) Ler.3-Pairs with too many N: 0 (0.0%) Ler.3-Pairs written (passing filters): 24,571,735 (96.4%) -- Mp.1:Total read pairs processed: 25,824,818 Mp.1- Read 1 with adapter: 740,839 (2.9%) Mp.1- Read 2 with adapter: 669,907 (2.6%) Mp.1-Pairs that were too short: 980,780 (3.8%) Mp.1-Pairs with too many N: 0 (0.0%) Mp.1-Pairs written (passing filters): 24,844,038 (96.2%) -- Mp.2:Total read pairs processed: 25,417,652 Mp.2- Read 1 with adapter: 736,036 (2.9%) Mp.2- Read 2 with adapter: 682,946 (2.7%) Mp.2-Pairs that were too short: 840,970 (3.3%) Mp.2-Pairs with too many N: 0 (0.0%) Mp.2-Pairs written (passing filters): 24,576,682 (96.7%) -- Mp.3:Total read pairs processed: 25,456,129 Mp.3- Read 1 with adapter: 731,091 (2.9%) Mp.3- Read 2 with adapter: 692,477 (2.7%) Mp.3-Pairs that were too short: 865,740 (3.4%) Mp.3-Pairs with too many N: 0 (0.0%) Mp.3-Pairs written (passing filters): 24,590,389 (96.6%) -- PRO.1:Total read pairs processed: 25,758,935 PRO.1- Read 1 with adapter: 724,584 (2.8%) PRO.1- Read 2 with adapter: 656,739 (2.5%) PRO.1-Pairs that were too short: 1,043,816 (4.1%) PRO.1-Pairs with too many N: 0 (0.0%) PRO.1-Pairs written (passing filters): 24,715,119 (95.9%) -- PRO.2:Total read pairs processed: 25,730,074 PRO.2- Read 1 with adapter: 705,053 (2.7%) PRO.2- Read 2 with adapter: 631,878 (2.5%) PRO.2-Pairs that were too short: 1,088,575 (4.2%) PRO.2-Pairs with too many N: 0 (0.0%) PRO.2-Pairs written (passing filters): 24,641,499 (95.8%) -- PRO.3:Total read pairs processed: 25,786,077 PRO.3- Read 1 with adapter: 717,699 (2.8%) PRO.3- Read 2 with adapter: 668,624 (2.6%) PRO.3-Pairs that were too short: 862,432 (3.3%) PRO.3-Pairs with too many N: 0 (0.0%) PRO.3-Pairs written (passing filters): 24,923,645 (96.7%) -- Pa.1:Total read pairs processed: 25,851,691 Pa.1- Read 1 with adapter: 745,267 (2.9%) Pa.1- Read 2 with adapter: 674,153 (2.6%) Pa.1-Pairs that were too short: 949,402 (3.7%) Pa.1-Pairs with too many N: 0 (0.0%) Pa.1-Pairs written (passing filters): 24,902,289 (96.3%) -- Pa.2:Total read pairs processed: 25,763,291 Pa.2- Read 1 with adapter: 730,438 (2.8%) Pa.2- Read 2 with adapter: 662,603 (2.6%) Pa.2-Pairs that were too short: 1,039,205 (4.0%) Pa.2-Pairs with too many N: 0 (0.0%) Pa.2-Pairs written (passing filters): 24,724,086 (96.0%) -- Pa.3:Total read pairs processed: 25,764,024 Pa.3- Read 1 with adapter: 733,636 (2.8%) Pa.3- Read 2 with adapter: 657,811 (2.6%) Pa.3-Pairs that were too short: 1,049,366 (4.1%) Pa.3-Pairs with too many N: 0 (0.0%) Pa.3-Pairs written (passing filters): 24,714,658 (95.9%) -- RGA.1:Total read pairs processed: 25,809,783 RGA.1- Read 1 with adapter: 731,232 (2.8%) RGA.1- Read 2 with adapter: 696,194 (2.7%) RGA.1-Pairs that were too short: 836,303 (3.2%) RGA.1-Pairs with too many N: 0 (0.0%) RGA.1-Pairs written (passing filters): 24,973,480 (96.8%) -- RGA.2:Total read pairs processed: 25,784,901 RGA.2- Read 1 with adapter: 732,444 (2.8%) RGA.2- Read 2 with adapter: 658,090 (2.6%) RGA.2-Pairs that were too short: 1,001,355 (3.9%) RGA.2-Pairs with too many N: 0 (0.0%) RGA.2-Pairs written (passing filters): 24,783,546 (96.1%) -- RGA.3:Total read pairs processed: 25,757,458 RGA.3- Read 1 with adapter: 735,248 (2.9%) RGA.3- Read 2 with adapter: 665,016 (2.6%) RGA.3-Pairs that were too short: 1,000,307 (3.9%) RGA.3-Pairs with too many N: 0 (0.0%) RGA.3-Pairs written (passing filters): 24,757,151 (96.1%) -- Sm.1:Total read pairs processed: 25,760,652 Sm.1- Read 1 with adapter: 730,352 (2.8%) Sm.1- Read 2 with adapter: 659,803 (2.6%) Sm.1-Pairs that were too short: 1,054,016 (4.1%) Sm.1-Pairs with too many N: 0 (0.0%) Sm.1-Pairs written (passing filters): 24,706,636 (95.9%) -- Sm.2:Total read pairs processed: 25,839,527 Sm.2- Read 1 with adapter: 726,273 (2.8%) Sm.2- Read 2 with adapter: 675,231 (2.6%) Sm.2-Pairs that were too short: 959,538 (3.7%) Sm.2-Pairs with too many N: 0 (0.0%) Sm.2-Pairs written (passing filters): 24,879,989 (96.3%) -- Sm.3:Total read pairs processed: 25,959,884 Sm.3- Read 1 with adapter: 752,705 (2.9%) Sm.3- Read 2 with adapter: 669,911 (2.6%) Sm.3-Pairs that were too short: 780,750 (3.0%) Sm.3-Pairs with too many N: 0 (0.0%) Sm.3-Pairs written (passing filters): 25,179,134 (97.0%)