FastQCFastQC Report
Fri 29 Apr 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144
Sequences flagged as poor quality0
Sequence length15-35
%GC71

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGGGTCGTCCGTC4833.33333333333333No Hit
TTCAGGCGGCCGATC32.083333333333333No Hit
GAGGGTAGGGAACCT21.3888888888888888No Hit
CTGCCCACTGGGGTGTCGCGGCC21.3888888888888888No Hit
TTCGGGCGAGCCCTCGCCT21.3888888888888888No Hit
ATTCAGGCGGCCGATC21.3888888888888888No Hit
GGCGTCCGTCCTTGGATC10.6944444444444444No Hit
CATCCCCGTGAGACAC10.6944444444444444No Hit
TGCCCACTGGGGTGTCGCGGC10.6944444444444444No Hit
CGCTTCTGGACCGAGACCCGAACG10.6944444444444444No Hit
CCCCCCCCCGTGCCCGTCA10.6944444444444444No Hit
ACCCGGATCTCCCGGGCCC10.6944444444444444No Hit
GCTTCAGCTGAGGACC10.6944444444444444No Hit
CGGGGAAGCGCCGGTGGGG10.6944444444444444No Hit
CTACAACCTTGCCACCGCGGACCTC10.6944444444444444No Hit
CGGCGCCGGGTTCCCTCACCCGAAAGGG10.6944444444444444No Hit
GAGCCCTCGCCTCCGCG10.6944444444444444No Hit
ACGACTTGGTAGAACGG10.6944444444444444No Hit
CCCGACCCTCGCTCGTGATCCGC10.6944444444444444No Hit
TATGCCCCGAGGGGCACGACGAGCGGAGA10.6944444444444444No Hit
TCCGAGGAGCTCGAACGTCT10.6944444444444444No Hit
AGGTCGGCGTGCGTGACACCTTCCGGTTGGCCGGC10.6944444444444444No Hit
ACACCTCCTCCCCGGTCCGTCCGACGA10.6944444444444444No Hit
TGCCCACTGGGGTGTCGCGGCC10.6944444444444444No Hit
TTGCCACCGCGGACCTCGC10.6944444444444444No Hit
TGGCGTGGTCTCTGTGAC10.6944444444444444No Hit
TACTGGGCCCGCTTCTGGACCGAGACCCGAAC10.6944444444444444No Hit
GAACGAGCGATGGCGGTGGGTATC10.6944444444444444No Hit
AGTATGGGACTCCTTCCGTC10.6944444444444444No Hit
GCCCACTGGGGTGTCGCGGCC10.6944444444444444No Hit
TCGGCGTGCGTGACACCTTC10.6944444444444444No Hit
TCTACAACCTGGCCAC10.6944444444444444No Hit
GGGCCATGGCTGAACCACGACTTGGTAGAACGGGC10.6944444444444444No Hit
GTCAAAGCTCCCCTGCCCCCAT10.6944444444444444No Hit
GGTCATGGCTGAACCACGACTTGGTAGAAC10.6944444444444444No Hit
CTTCGTCAAAGCTCCCC10.6944444444444444No Hit
TGCCCACTGGGGTGTCG10.6944444444444444No Hit
GAAATATTGAGGAGGAGG10.6944444444444444No Hit
TTGCGTCGCGGTTCCGACAGTA10.6944444444444444No Hit
TGGTCTCTGTGACGGCCTCAAG10.6944444444444444No Hit
GGCCGATCCCCTCTCCCCCCCCCG10.6944444444444444No Hit
CGTCTGGTCCTCCGAA10.6944444444444444No Hit
TCGCACTCAAGGTGGACTCCGACCCGTGGA10.6944444444444444No Hit
TCCCCTGCCCCCATCCG10.6944444444444444No Hit
CAGGACGAACGAGCGATGGCGGTGGGT10.6944444444444444No Hit
CTCGTCGTCCGCCGCTGTGGCGGTCACCC10.6944444444444444No Hit
GGGGTCATGGCTGAACCACGACTTGGTA10.6944444444444444No Hit
ACCTTGCCACCGCGGACCTCGCCTGTGTCGACGG10.6944444444444444No Hit
GCTTCAGCTGAGGACCCCGCTGCTCTTCGAGCG10.6944444444444444No Hit
CCTGACTGCCGCCACAGACCTCATGCCTACGGACC10.6944444444444444No Hit
TTGGCCGCTCCTCGAGGCGGAGCCCCGCGTCGACC10.6944444444444444No Hit
TCCGGTGCGCGCGGCCGCGG10.6944444444444444No Hit
CATGGCTGAACCACGACTTGGTAGAACGGGC10.6944444444444444No Hit
GCGCGGCCGCGGTACCCGAGTTGGGCAT10.6944444444444444No Hit
GCCTCTTCCACTGGGGCA10.6944444444444444No Hit
GACTCCGACCCGTGGAGACAGGGCGACGACC10.6944444444444444No Hit
CATGGCTGAACCACGACTTGGTAGAAC10.6944444444444444No Hit
ACCGAGACCCGAACGGGGACCACTCGGG10.6944444444444444No Hit
CCCCCATCCGGGTGATAAACCCTCCCCCTGGCCCT10.6944444444444444No Hit
ATGGCTGAACCACGACTTGGTAGAACGGGC10.6944444444444444No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCTCCGC10.6944444444444444No Hit
GTGATCCGCGGGCCC10.6944444444444444No Hit
CGGCCGATCCCCTCTCCCCCCCCCGTGCCC10.6944444444444444No Hit
GGCTTCCGGTGCGCGCGGCC10.6944444444444444No Hit
CGGCCGCTCTTCACTCCGAG10.6944444444444444No Hit
TGGAGCGCAGCGCGGCCG10.6944444444444444No Hit
CGTCCGTCCTTGGATCCTTCTCGTCGTCCG10.6944444444444444No Hit
CGGGTCTCCGAGGAGCTCGAACGTC10.6944444444444444No Hit
CCCCCGGCGATGGCGGA10.6944444444444444No Hit
TCATGGCTGAACCACGACTTGGTAGAACGGGC10.6944444444444444No Hit
CCGCCAACGCCCCGACCCTC10.6944444444444444No Hit
CCCGCTTCTGGACAGAGACCCGA10.6944444444444444No Hit
ACCGAGACCCGAACGG10.6944444444444444No Hit
CGACCTGACTGCTGCCACAGACCTC10.6944444444444444No Hit
GCAAGAACAAGAGAGGGCATGACCA10.6944444444444444No Hit
GCCGCGGAGGCCCGCGCCGAGGGCGGCCATCGG10.6944444444444444No Hit
CTCACCCTTCCCGCTG10.6944444444444444No Hit
GCCAACGCCCCGACCCT10.6944444444444444No Hit
CCACAGACCTCATGCCTACGGACC10.6944444444444444No Hit
GGGGTCATGGCTGAACCACGACTTGGTAGAACG10.6944444444444444No Hit
TCCGTCTGGTCCTCC10.6944444444444444No Hit
CTGGGGCACGTGGGGGGGATG10.6944444444444444No Hit
ACGAGTGGCTGATCACCGCGACCGGTGG10.6944444444444444No Hit
CGCTCGCGCGCTGGGCGCGGACCAG10.6944444444444444No Hit
ACCTGGCCACCGCGGACCTCGC10.6944444444444444No Hit
CGCCAACGCCCCGACCCTCGCTC10.6944444444444444No Hit
CAAGGATCTCCTCTGGCAG10.6944444444444444No Hit
CAAGGTGGACTCCGACCC10.6944444444444444No Hit
TGGTCCCCCGCGGGTTCCCCCTCCACC10.6944444444444444No Hit
TCTGGTCCTCCGAAGCCT10.6944444444444444No Hit
CCTGGGGCACGTGGGGGGGATGGGGGTGATGGGGA10.6944444444444444No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)