FastQCFastQC Report
Fri 29 Apr 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63
Sequences flagged as poor quality0
Sequence length15-35
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGACGGACGACCCC2336.507936507936506No Hit
TCTCCGCTCGTCGTGCCCCTCGGGGCATAGA11.5873015873015872No Hit
ACTGTCGGAACCGCGA11.5873015873015872No Hit
GCCACAGCGGCGGACG11.5873015873015872No Hit
TCCCGCGGAGGCGAGGGC11.5873015873015872No Hit
GGAACCCGGCGCCGCCCAGGGAT11.5873015873015872No Hit
AGCTGGGGCGGCGTA11.5873015873015872No Hit
CGGATGTCATCCAGCTCAGGACGCGCCAAATCCCA11.5873015873015872No Hit
GAAGCTCCGAGCGCGCACGAGTTCGCTCT11.5873015873015872No Hit
GGGGGGCCACTGTCCGCCCG11.5873015873015872No Hit
ACACAGGCGAGGTCCGCGGTGGCCAGGTTG11.5873015873015872No Hit
GGAGGAGGAGCGGCC11.5873015873015872No Hit
ACTTGACCAGACGCAACGT11.5873015873015872No Hit
CGTCGGCCGCGACACCCCAGTGGGCAGGCGATC11.5873015873015872No Hit
AGGACCAGACGGAAGGAGTCCCATA11.5873015873015872No Hit
CGATCTACGGGCGGCC11.5873015873015872No Hit
GAGGACCAGACGGAA11.5873015873015872No Hit
GAAGGGTGAGATCCTGCCAGAGGAGATCCTT11.5873015873015872No Hit
TCCCCATCACCCCCA11.5873015873015872No Hit
CCGGCCAACCGGAAGGTGTCAC11.5873015873015872No Hit
TCTCCACGGGTCGGAGTCCACC11.5873015873015872No Hit
CTACCAAGTCGTGGTT11.5873015873015872No Hit
GCCCGTTCTACCAAGTCGT11.5873015873015872No Hit
GGGACCAGCTGCGCCGCCTGGT11.5873015873015872No Hit
GCCGCGACACCCCAGTGGGCAGATC11.5873015873015872No Hit
CGCCTCTGACGGGCACGGGGGGGGG11.5873015873015872No Hit
AAGGTCCGTAGGCATGAGGTC11.5873015873015872No Hit
GGATCCAAGGACGGACGC11.5873015873015872No Hit
CAAGATGACCCAAGACAGATTAA11.5873015873015872No Hit
GGATACCCACCGCCATCGCTCGTTCGTCCTG11.5873015873015872No Hit
CACTCAAACTTAAGA11.5873015873015872No Hit
GGGTGACCGCCACAGCGGCGGACGACGAGT11.5873015873015872No Hit
CCGAGAAATCTCAAA11.5873015873015872No Hit
TCGGGTCTCGGTCCAGAA11.5873015873015872No Hit
CCGCGGCCGCGCGCACCGGA11.5873015873015872No Hit
ACGAGAAGGATCCAAGGACGG11.5873015873015872No Hit
AGTGGACGCGCCCAGCGGGCAGGGACCCCCGTT11.5873015873015872No Hit
ATGTCATCCAGCTCAGGACGCGCCAAAT11.5873015873015872No Hit
GGAGTACATGACCCCACCGGC11.5873015873015872No Hit
CCAACCGGAAGGTGTCACGCACG11.5873015873015872No Hit
CAGAGGAGATCCTTG11.5873015873015872No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)