FastQCFastQC Report
Fri 29 Apr 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Partitivirus_1_segment_1.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Partitivirus_1_segment_1.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2132
Sequences flagged as poor quality0
Sequence length15-35
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTCGTGGCCCTCG452.1106941838649154No Hit
TTTCGTGGCCCTCGTTTCCG361.6885553470919326No Hit
TTTCGTGGCCCTCGTTTCC331.547842401500938No Hit
CCTCGTCGGGGTAACCCGAAAAGACCCGG331.547842401500938No Hit
GTTTCGTGGCCCTCGTTTCCG321.5009380863039399No Hit
TGTTTCGTGGCCCTC301.4071294559099436No Hit
TGTTTCGTGGCCCTCG291.3602251407129455No Hit
GTTTCGTGGCCCTCGTTTCCGATC210.9849906191369606No Hit
TTCGTGGCCCTCGTTTCC200.9380863039399625No Hit
GTTTCGTGGCCCTCGTTTCC200.9380863039399625No Hit
TCGTGGCCCTCGTTTCCG200.9380863039399625No Hit
GTTTCGTGGCCCTCGT180.8442776735459663No Hit
TTTCGTGGCCCTCGT170.797373358348968No Hit
CCTCGTCGGGGTAACCCGAAAAGACCCG150.7035647279549718No Hit
TTTCGTGGCCCTCGTTTCCGATC140.6566604127579738No Hit
TGTTTCGTGGCCCTCGTTTCCG130.6097560975609756No Hit
TGTTTCGTGGCCCTCGTTTCC130.6097560975609756No Hit
ATGTTTCGTGGCCCTC130.6097560975609756No Hit
CATGTTTCGTGGCCCTC130.6097560975609756No Hit
TTTCGTGGCCCTCGTTTC130.6097560975609756No Hit
TCGTGGCCCTCGTTTCC130.6097560975609756No Hit
ATGTTTCGTGGCCCTCG130.6097560975609756No Hit
TTCGTGGCCCTCGTTTCCG130.6097560975609756No Hit
GTTTCGTGGCCCTCGTTTC120.5628517823639775No Hit
TCGTGGCCCTCGTTTCCGATC110.5159474671669794No Hit
CCTCGTCGGGGTAACCCGAAAA100.46904315196998125No Hit
CCTCGTCGGGGTAACCCGAAAAGACCCGGA100.46904315196998125No Hit
AGAGCTTAACCGACA100.46904315196998125No Hit
CCTCGTCGGGGTAACCCGAAAAGACCCGGAGAAGC90.42213883677298314No Hit
TTTCGTGGCCCTCGTT90.42213883677298314No Hit
TGTTTCGTGGCCCTCGTTTC90.42213883677298314No Hit
TGTTTCGTGGCCCTCGTTTCCGA90.42213883677298314No Hit
GTGGCCCTCGTTTCCG90.42213883677298314No Hit
GTTTCGTGGCCCTCGTTTCCGAT80.37523452157598497No Hit
CCTCGTCGGGGTAACCCGAAAAGAC80.37523452157598497No Hit
TTTCGTGGCCCTCGTTTCCGAT80.37523452157598497No Hit
TGTTTCGTGGCCCTCGT80.37523452157598497No Hit
CCGCTCTCATGTTTCGTGGCCCTCGTTTCCG80.37523452157598497No Hit
CTCATGTTTCGTGGCCCTC70.3283302063789869No Hit
CGTGGCCCTCGTTTCCGATC70.3283302063789869No Hit
CCTCGTCGGGGTAACCCGAAAAGACCCGGAGA70.3283302063789869No Hit
TCGTGGCCCTCGTTTC70.3283302063789869No Hit
CGGGGTAACCCGAAAAGACCCGG70.3283302063789869No Hit
CATGTTTCGTGGCCCTCGTTTCCGAT70.3283302063789869No Hit
TGTTTCGTGGCCCTCGTTTCCGATC70.3283302063789869No Hit
CTCGTCGGGGTAACCCGAAAAGACCCGG70.3283302063789869No Hit
TTCGTGGCCCTCGTTTC60.28142589118198874No Hit
TGGCCCTCGTTTCCGATC60.28142589118198874No Hit
GGCCCTCGTTTCCGAT60.28142589118198874No Hit
CCTCGTCGGGGTAACCCGAAAAG60.28142589118198874No Hit
CGCGAAGGCCTCGTCGGG60.28142589118198874No Hit
CGTGGCCCTCGTTTCC60.28142589118198874No Hit
CGGAGAAGCTGAGGGGAGCTC60.28142589118198874No Hit
CATGTTTCGTGGCCCTCGTTTCCGATC60.28142589118198874No Hit
CCCGGAGAAGCTGAGGGGAGCTCC60.28142589118198874No Hit
CCGGAGAAGCTGAGGGGAGCTC60.28142589118198874No Hit
GTGGCCCTCGTTTCC60.28142589118198874No Hit
CTCGTCGGGGTAACCCGAAAAGACCCG60.28142589118198874No Hit
TGGCCCTCGTTTCCG60.28142589118198874No Hit
CCTCGTCGGGGTAACCCGA60.28142589118198874No Hit
CGCTCTCATGTTTCGTGGCCC60.28142589118198874No Hit
ATGTTTCGTGGCCCT50.23452157598499063No Hit
CGGAGAAGCTGAGGGGAGCT50.23452157598499063No Hit
ATCTGTGTCGCGAAG50.23452157598499063No Hit
GGTAACCCGAAAAGACCCG50.23452157598499063No Hit
TCTCATGTTTCGTGGCCCTCGTTTCCGAT50.23452157598499063No Hit
TCGTCGGGGTAACCCGAAAA50.23452157598499063No Hit
TGTTTCGTGGCCCTCGTT50.23452157598499063No Hit
CATGTTTCGTGGCCC50.23452157598499063No Hit
CCTCGTCGGGGTAACCCGAAAAGACCC50.23452157598499063No Hit
CGGGGTAACCCGAAAAGACCCGGA50.23452157598499063No Hit
GGGGTAACCCGAAAA50.23452157598499063No Hit
CCTCGTCGGGGTAACC50.23452157598499063No Hit
ATGTTTCGTGGCCCTCGT50.23452157598499063No Hit
TAACCCGAAAAGACC50.23452157598499063No Hit
ACCGCTCTCATGTTTCGTGGCCC50.23452157598499063No Hit
CTCTCATGTTTCGTGGCCCTCGTTTCCG50.23452157598499063No Hit
CTCGTCGGGGTAACCCGAAAAGACCCGGA50.23452157598499063No Hit
GAAGGCCTCGTCGGG50.23452157598499063No Hit
GTAACCCGAAAAGACCCGGAGAAGCTGA50.23452157598499063No Hit
CATGTTTCGTGGCCCTCGTTTCCG50.23452157598499063No Hit
CCTCGTCGGGGTAACCC50.23452157598499063No Hit
TGTTTCGTGGCCCTCGTTT50.23452157598499063No Hit
GGCCCTCGTTTCCGA50.23452157598499063No Hit
CTCTCATGTTTCGTGGCCCTCGTTTCCGAT50.23452157598499063No Hit
TCTGTGTCGCGAAGGC50.23452157598499063No Hit
CCCTCGTTTCCGATC50.23452157598499063No Hit
CGTCGGGGTAACCCGAAAAGACCCGG50.23452157598499063No Hit
TCATGTTTCGTGGCCCTC50.23452157598499063No Hit
TTCGTGGCCCTCGTTTCCGATC50.23452157598499063No Hit
AACCCGAAAAGACCCGG50.23452157598499063No Hit
TTTCGTGGCCCTCGTTT50.23452157598499063No Hit
AGGCCTCGTCGGGGTAACCCGA50.23452157598499063No Hit
CTCGTCGGGGTAACCCGAAAA50.23452157598499063No Hit
CGCTCTCATGTTTCGTGGCCCTCGTTTCCG50.23452157598499063No Hit
CCGGAGAAGCTGAGGGGAGCT50.23452157598499063No Hit
CGTGGCCCTCGTTTCCG50.23452157598499063No Hit
AAGCTGAGGGGAGCTC50.23452157598499063No Hit
ATGTTTCGTGGCCCTCGTTTCCGATCTTTGCGA40.18761726078799248No Hit
ATGTTTCGTGGCCCTCGTT40.18761726078799248No Hit
GGGGTAACCCGAAAAGACCCGGA40.18761726078799248No Hit
TCGTGGCCCTCGTTTCCGATCT40.18761726078799248No Hit
AAAGACCCGGAGAAGCTGA40.18761726078799248No Hit
CCTCGTCGGGGTAACCCGAAAAGACC40.18761726078799248No Hit
TCGGGGTAACCCGAAAA40.18761726078799248No Hit
CTCGTCGGGGTAACCCGAAAAGACCCGGAGA40.18761726078799248No Hit
AAGGCCTCGTCGGGGTAACCC40.18761726078799248No Hit
AAAGACCCGGAGAAGCTGAGGGGAGCTCCGG40.18761726078799248No Hit
TTCGTGGCCCTCGTT40.18761726078799248No Hit
CGAAAAGACCCGGAGAA40.18761726078799248No Hit
TCGTCGGGGTAACCC40.18761726078799248No Hit
GGGGTAACCCGAAAAGACCCGGAGA40.18761726078799248No Hit
GTGGCCCTCGTTTCCGATC40.18761726078799248No Hit
CGTGGCCCTCGTTTCCGAT40.18761726078799248No Hit
GTTTCGTGGCCCTCGTT40.18761726078799248No Hit
TCGTGGCCCTCGTTTCCGAT40.18761726078799248No Hit
TCTGTGTCGCGAAGG40.18761726078799248No Hit
GTTTCGTGGCCCTCGTTT40.18761726078799248No Hit
GAGGGGAGCTCCGGG40.18761726078799248No Hit
ATGTTTCGTGGCCCTCGTTTCCG40.18761726078799248No Hit
CATGTTTCGTGGCCCTCGTTTCCGA40.18761726078799248No Hit
GTTTCGTGGCCCTCGTTTCCGATCTTTG40.18761726078799248No Hit
CGTCGGGGTAACCCGAAAA40.18761726078799248No Hit
TCATGTTTCGTGGCCCTCGTTTC40.18761726078799248No Hit
CCTCGTCGGGGTAACCCGAA40.18761726078799248No Hit
CGTGGCCCTCGTTTCCGA40.18761726078799248No Hit
AAGGCCTCGTCGGGGTAACCCGA40.18761726078799248No Hit
CCGCTCTCATGTTTCGTGGCCCTCGTTTCCGATC40.18761726078799248No Hit
TCGGGGTAACCCGAAAAGACCCGGA40.18761726078799248No Hit
CTCATGTTTCGTGGCCC40.18761726078799248No Hit
TGGCCCTCGTTTCCGA40.18761726078799248No Hit
CGAAAAGACCCGGAGAAGC40.18761726078799248No Hit
GCCTCGTCGGGGTAACCCGAAAA40.18761726078799248No Hit
CTCGTCGGGGTAACCCGAAAAGACCC40.18761726078799248No Hit
CTCATGTTTCGTGGCCCTCGTTTCCG40.18761726078799248No Hit
CTCGTCGGGGTAACCCGA40.18761726078799248No Hit
CATGTTTCGTGGCCCTCG40.18761726078799248No Hit
CGGGGTAACCCGAAAAGACCC40.18761726078799248No Hit
TGGCCCTCGTTTCCGAT40.18761726078799248No Hit
ATGTTTCGTGGCCCTCGTTTCC40.18761726078799248No Hit
GGTAACCCGAAAAGACCCGGA30.14071294559099437No Hit
CGTGGCCCTCGTTTC30.14071294559099437No Hit
CTCGTCGGGGTAACCCGAAAAGA30.14071294559099437No Hit
CCGCTCTCATGTTTCGTGGCCCTCG30.14071294559099437No Hit
GGGTAACCCGAAAAGACCCGGAGAAGCTGA30.14071294559099437No Hit
CTCATGTTTCGTGGCCCTCGTTTCCGATC30.14071294559099437No Hit
TTTCGTGGCCCTCGTTTCCGATCTTTGCGATC30.14071294559099437No Hit
GAAGGCCTCGTCGGGGTAACCCGAAA30.14071294559099437No Hit
GGGGAGCTCCGGGGAGA30.14071294559099437No Hit
GGGGAGCTCCGGGGA30.14071294559099437No Hit
GAGAAGCTGAGGGGAG30.14071294559099437No Hit
AACCGCTCTCATGTTTCGTGGCCCTCGTTTCC30.14071294559099437No Hit
GTCGGGGTAACCCGAAAAGACCCGGA30.14071294559099437No Hit
GTGGCCCTCGTTTCCGA30.14071294559099437No Hit
CCCGGAGAAGCTGAGGGGAGCTC30.14071294559099437No Hit
TTTCGTGGCCCTCGTTTCCGATCTTTGCG30.14071294559099437No Hit
CGTCGGGGTAACCCGAAAAGACCCGGAGAAGC30.14071294559099437No Hit
GGCCCTCGTTTCCGATC30.14071294559099437No Hit
CCCTCGTTTCCGATCT30.14071294559099437No Hit
CCGCTCTCATGTTTCGTG30.14071294559099437No Hit
TCGTCGGGGTAACCCGAAAAGACCC30.14071294559099437No Hit
CGGGGTAACCCGAAAA30.14071294559099437No Hit
GGGTAACCCGAAAAGACCCGG30.14071294559099437No Hit
GAAGGCCTCGTCGGGGTAACCCGA30.14071294559099437No Hit
AGGGGAGCTCCGGGGAGA30.14071294559099437No Hit
CGAAAAGACCCGGAGAAGCT30.14071294559099437No Hit
CCGCTCTCATGTTTC30.14071294559099437No Hit
TTCGTGGCCCTCGTTTCCGATCTTT30.14071294559099437No Hit
CGGGGTAACCCGAAAAGACC30.14071294559099437No Hit
GGTAACCCGAAAAGACCCGGAGAA30.14071294559099437No Hit
TCGTCGGGGTAACCCGAAAAGACCCGG30.14071294559099437No Hit
GTTTCGTGGCCCTCGTTTCCGA30.14071294559099437No Hit
AAAAGACCCGGAGAAGCTGAGGGGAGCTC30.14071294559099437No Hit
CGTCGGGGTAACCCGAAAAGAC30.14071294559099437No Hit
GTCGGGGTAACCCGAAAAGACCCG30.14071294559099437No Hit
CGCTCTCATGTTTCGTGGCCCTCGTTTCCGAT30.14071294559099437No Hit
CGTCGGGGTAACCCGAAAAGACCCGGAGA30.14071294559099437No Hit
ATGTTTCGTGGCCCTCGTTTC30.14071294559099437No Hit
CGGGGTAACCCGAAAAGACCCGGAGAAGCTGAG30.14071294559099437No Hit
GGAGAAGCTGAGGGGAGC30.14071294559099437No Hit
CTCATGTTTCGTGGCCCTCGTTTCCGATCTTTGCG30.14071294559099437No Hit
TTTCGTGGCCCTCGTTTCCGATCTTTGCGATCTGT30.14071294559099437No Hit
CGCTCTCATGTTTCGTGGCCCTC30.14071294559099437No Hit
CGCGAAGGCCTCGTC30.14071294559099437No Hit
CGGAGAAGCTGAGGGG30.14071294559099437No Hit
GGAGCTCCGGGGAGA30.14071294559099437No Hit
TCTCATGTTTCGTGGCCCT30.14071294559099437No Hit
TCGTGGCCCTCGTTTCCGA30.14071294559099437No Hit
CTCTCATGTTTCGTG30.14071294559099437No Hit
ACCGCTCTCATGTTTCGTGG30.14071294559099437No Hit
AACCCGAAAAGACCCGGAGAAGC30.14071294559099437No Hit
AAGACCCGGAGAAGCTGAGGGGAGCTCCGG30.14071294559099437No Hit
CATGTTTCGTGGCCCTCGTTTCC30.14071294559099437No Hit
GTCGGGGTAACCCGAAAAGACCC30.14071294559099437No Hit
GGGAGCTCCGGGGAGA30.14071294559099437No Hit
TCGTCGGGGTAACCCGA30.14071294559099437No Hit
TAACCCGAAAAGACCC30.14071294559099437No Hit
GGTAACCCGAAAAGACC30.14071294559099437No Hit
TGAGGGGAGCTCCGGGGA30.14071294559099437No Hit
AGGCCTCGTCGGGGTAACCCGAAAAGACCCGGA30.14071294559099437No Hit
CTCATGTTTCGTGGCCCTCG30.14071294559099437No Hit
TCTCATGTTTCGTGGCCCTCGTTTCC30.14071294559099437No Hit
CCGGAGAAGCTGAGGGGAGCTCC30.14071294559099437No Hit
CTCGTCGGGGTAACCC30.14071294559099437No Hit
ATGTTTCGTGGCCCTCGTTTCCGAT30.14071294559099437No Hit
GCTCTCATGTTTCGTGGCCCTCGTTTCCGAT30.14071294559099437No Hit
GTAACCCGAAAAGACCCGGAGAA30.14071294559099437No Hit
GCCCTCGTTTCCGATC30.14071294559099437No Hit
AACCCGAAAAGACCCG30.14071294559099437No Hit
CGAAAAGACCCGGAGAAGCTGAGG30.14071294559099437No Hit
AACCCGAAAAGACCCGGA30.14071294559099437No Hit
TTTCGTGGCCCTCGTTTCCGA30.14071294559099437No Hit
GCCTCGTCGGGGTAACCCGAAAAGACCCG30.14071294559099437No Hit
GTCGGGGTAACCCGAAAAGA30.14071294559099437No Hit
CCGCTCTCATGTTTCGTGGCCCTCGTTTCCGAT30.14071294559099437No Hit
TTCGTGGCCCTCGTTTCCGA30.14071294559099437No Hit
CGGAGAAGCTGAGGGGAGCTCC30.14071294559099437No Hit
AGGCCTCGTCGGGGTAACCCGAA30.14071294559099437No Hit
GGGTAACCCGAAAAGACCCGGA30.14071294559099437No Hit
CCGCTCTCATGTTTCGTGGCCCTCGTTTCCGA30.14071294559099437No Hit
ATGTTTCGTGGCCCTCGTTTCCGA30.14071294559099437No Hit
TAACCCGAAAAGACCCGGA30.14071294559099437No Hit
GAAGGCCTCGTCGGGGTAACCCGAAAA30.14071294559099437No Hit
GAAGGCCTCGTCGGGG30.14071294559099437No Hit
GCTCTCATGTTTCGTGGCCCTCGTTTCCG30.14071294559099437No Hit

[OK]Adapter Content

Adapter graph