FastQCFastQC Report
Fri 29 Apr 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Partitivirus_3_segment_2.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Partitivirus_3_segment_2.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length15-31
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGAGTCGTCTTTAATACAGTAAC116.666666666666664No Hit
CCACAGAACTTCTTTACCCACCGATG116.666666666666664No Hit
CCACAAGCTATAGCT116.666666666666664No Hit
GCCAGCCGGGCGCTC116.666666666666664No Hit
GATAAAGACTTATTA116.666666666666664No Hit
AACCCACAGAACTTCTTTACCCACCGATGCC116.666666666666664No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)