FastQCFastQC Report
Fri 29 Apr 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Sobemovirus_segment_2.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Sobemovirus_segment_2.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141
Sequences flagged as poor quality0
Sequence length15-35
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGACTCTCTTGAAACGCCT1812.76595744680851No Hit
CTGTGACCAAGACCAGACTCCTACGGGAGAGTCGA32.127659574468085No Hit
GCACCAGATCTCACCAACGAC21.4184397163120568No Hit
CCCATGAATCTGATCACCCGA21.4184397163120568No Hit
GAACTCCTGCTGCACC10.7092198581560284No Hit
AACCACGACTGAAATC10.7092198581560284No Hit
AGGCCACTGCTGAGTGTC10.7092198581560284No Hit
CACCAAGGTCAACTCCCTA10.7092198581560284No Hit
GTGTCTGTGAGATCGAA10.7092198581560284No Hit
TAGAATCTCGGCCAGGGTTTTGATG10.7092198581560284No Hit
ACAATCCCTGCACAACACTCA10.7092198581560284No Hit
TGCGAATCCGCCCAA10.7092198581560284No Hit
CCGAAAAGAGACCGTAAAAGAGCCCAT10.7092198581560284No Hit
TTGCCCTGCGAATCCGCC10.7092198581560284No Hit
ATCGCGGGCCCATTCTTCCTC10.7092198581560284No Hit
CCCAAGCGGCATGCGT10.7092198581560284No Hit
ACTAGAATCTCGGCCAGGGTT10.7092198581560284No Hit
CAACGACTCTCTTGAAACGCC10.7092198581560284No Hit
TCGCCGCCGGTGCCTTGGAGGGCCCCGA10.7092198581560284No Hit
GTGCCAACGACTCTCTTGAAACGCCTTCGGA10.7092198581560284No Hit
CGCGCCAACTGTCACCGACGCC10.7092198581560284No Hit
CATCGGCAGGCAGAGGGT10.7092198581560284No Hit
AAAATCCCAGCCACAGCACCT10.7092198581560284No Hit
TTCCTTTTCTTCCGCGTCGC10.7092198581560284No Hit
TCTCGGAACAAAGCAAACGCT10.7092198581560284No Hit
TGGATGCTGTGCCAACGACTC10.7092198581560284No Hit
GCCTTCGACACCCCC10.7092198581560284No Hit
AGCCTGGAAAAACCCACAGCACCGCC10.7092198581560284No Hit
TCATAGGAAGAGAAGAGACTAGAA10.7092198581560284No Hit
TCCCTAACCAGTCGATAGCTCCTCAACCA10.7092198581560284No Hit
ATATGGCCCCCCCTCGGA10.7092198581560284No Hit
CAGCGAGCGCGCCAA10.7092198581560284No Hit
CCCTCACGCGACACGGG10.7092198581560284No Hit
CATCAACCCTAATATGGCCCCCCC10.7092198581560284No Hit
CACCGTAGGCAATCAAACCACCGAAAGTGG10.7092198581560284No Hit
AAAGTCAGAAACCTC10.7092198581560284No Hit
CACCAGATCTCACCAACGAC10.7092198581560284No Hit
AGACAGTCTACACGTGCCCTCAC10.7092198581560284No Hit
CAGACGATCGCACCCG10.7092198581560284No Hit
AGAAATCGTGAACTCAGAATCA10.7092198581560284No Hit
CCAGCCACAGCACCTTT10.7092198581560284No Hit
CATTCTTCCTCTTGCGCGCCT10.7092198581560284No Hit
ACCGTAAAAGAGCCCAT10.7092198581560284No Hit
CATCCGAAAAGAGACCGTAAAAGAGCCCATGAATC10.7092198581560284No Hit
CTTGCCATCGGCAGGCA10.7092198581560284No Hit
GCAAACTCCACCACGTACCTGCACCA10.7092198581560284No Hit
GACTCTCTTGAAACGCCT10.7092198581560284No Hit
ATTTCTATGGACAAAG10.7092198581560284No Hit
CAAATATCCTCTGAAGACTCCT10.7092198581560284No Hit
CGACTCTCTTGAAACGCCT10.7092198581560284No Hit
GCCCATCGCGGGCCCATTCTTCCTCTT10.7092198581560284No Hit
AAGACCAGACTCCTAC10.7092198581560284No Hit
AAACCCGGCGGACACACTGTC10.7092198581560284No Hit
CAAGGGGCAGGGCGTGATCATGGAACTGT10.7092198581560284No Hit
AAACCCGGCGGACACACTGT10.7092198581560284No Hit
GTTCCTATGTCGCCTGAG10.7092198581560284No Hit
CCCCCCTCGGATTCATCCGAACA10.7092198581560284No Hit
GTCACCGACGCCACATTCTTATTCTTCTTAGA10.7092198581560284No Hit
CCTCCCAGACGATCGCACCCGTGAG10.7092198581560284No Hit
AAACGCCTTCGACACCC10.7092198581560284No Hit
TACGGGAGAGCCTGGAAAAAC10.7092198581560284No Hit
CAACACTCACCCGCTCGACA10.7092198581560284No Hit
TACCCGCAAACCCGGCGG10.7092198581560284No Hit
CGCCCCGGCGTTTCCCCCTCC10.7092198581560284No Hit
TCAACAAGCAACAATCCCGCC10.7092198581560284No Hit
GCACCAAGGTCAACTCCCTAACCAGTCGGATCG10.7092198581560284No Hit
AGGCCGTCATTGAAACGCTGACGAAAC10.7092198581560284No Hit
AACGTCCAAGTTAGAGGCCGAA10.7092198581560284No Hit
AAGAGACCGTAAAAGAGC10.7092198581560284No Hit
GTGACCAAGACCAGACTCCTACG10.7092198581560284No Hit
ACGTCCATGTTAGAGGCC10.7092198581560284No Hit
CTGTCCCTCACAAAGGCCG10.7092198581560284No Hit
ACCCGGCGGACACAC10.7092198581560284No Hit
CTTCCGCGTCGCCGC10.7092198581560284No Hit
CCCCTCCCAGACGATCGCACCCG10.7092198581560284No Hit
GGGAATGAGTCAGGACGGATAA10.7092198581560284No Hit
ACTGCACTGTCGTCTGAGCGTG10.7092198581560284No Hit
CTATGAACTCCTGCTGCACCAAGGTCAACTCCCT10.7092198581560284No Hit
CCCCTCCCAGACGATCGCACCCGT10.7092198581560284No Hit
GCTGTGACCAAGACCAGACTCCTACGGGAGA10.7092198581560284No Hit
CCAAGACCGATTTCTATGGACA10.7092198581560284No Hit
AGACCGTAAAAGAGCCCAT10.7092198581560284No Hit
CGATCGCACCCGTGAGTCT10.7092198581560284No Hit
CCACGCGACACGGGGCCCA10.7092198581560284No Hit
TCATGCACTCCACGTCGCAGGACGA10.7092198581560284No Hit
ACTGCACTGTCGTCTGAGCG10.7092198581560284No Hit
AGGAAGAGAAGAGACTAGAATCTCGGCCAG10.7092198581560284No Hit
TTCCGCGTCGCCGCCGGTGCCT10.7092198581560284No Hit
CTATGAACTCCTGCTGCA10.7092198581560284No Hit
GCCCCGGCAGCGCCGCG10.7092198581560284No Hit
GACCAAGACCAGACTCCTACGGGAGA10.7092198581560284No Hit
GGGCCCCGGCAGCGCCGCGAGATCG10.7092198581560284No Hit
TCTGAGCGTGGATTGCAA10.7092198581560284No Hit
CCAAGACCAGACTCCTACGGGAGAGTCGAT10.7092198581560284No Hit
CAAAGTCAGAAACCTCG10.7092198581560284No Hit
TGTAACGCTGACGAAAC10.7092198581560284No Hit
TGCTGTGCCAACGACTCTCTT10.7092198581560284No Hit
CTGTGACCAAGACCAGACTCCTACGGGAGAGTCG10.7092198581560284No Hit
TCCCCCTCCCAGACGATCGCACCCG10.7092198581560284No Hit
GTATAGGAACTCCCCGCC10.7092198581560284No Hit
ACCAAGGTCAACTCCCTAA10.7092198581560284No Hit
CCCCGGCAGCGCCGCGAG10.7092198581560284No Hit
TTCCTCTTGCGCGCCTTCCTT10.7092198581560284No Hit
AGACTCCTACGGGAG10.7092198581560284No Hit
AGCCACGATGCTGTGACCAAGACCAGACT10.7092198581560284No Hit
CGCCGCGAGAGCTTCAGCGAGCGCGCCAACTGTG10.7092198581560284No Hit
TGTAACGCTGACGAAACGCTGGC10.7092198581560284No Hit
AACTCCTGCTGCACC10.7092198581560284No Hit
GCGTCTGCAACCTCTCCCTAGGACATACCGA10.7092198581560284No Hit
CGCCGCGAGAGCTTCAGCGAGCGCGCCAAC10.7092198581560284No Hit
ACCAGATCTCACCAACGACGGTGTCCACCGA10.7092198581560284No Hit
GGGCTAACGTCCATG10.7092198581560284No Hit
ACTCCCTAACCAGTCGA10.7092198581560284No Hit
CAACTCCCTAACCAGTCGATA10.7092198581560284No Hit
TGTCATGCACTCCACGTCGCAGGACG10.7092198581560284No Hit
GGTTCCCCGGGCTAACG10.7092198581560284No Hit
CATTGTAACGCTGACGAAA10.7092198581560284No Hit
ACCCGCAAACCCGGCGGACACAC10.7092198581560284No Hit
CACTGCTGAGTGTCATGCACTCCACGTC10.7092198581560284No Hit
GTCCATGTTAGAGGCCGAA10.7092198581560284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)