FastQCFastQC Report
Fri 29 Apr 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Totivirus.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Totivirus.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences195
Sequences flagged as poor quality0
Sequence length15-35
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGATCGGGCGCCA115.641025641025641No Hit
ATGATGAGACCCTAT21.0256410256410255No Hit
TAACGACTCCGCAGGCG21.0256410256410255No Hit
TCTAGCTGCAGAGTCGTT21.0256410256410255No Hit
TAAGCGACACCGGCAGG21.0256410256410255No Hit
TTCAGCATCTTAACGACTCCGCAGGCGCACCCTTG10.5128205128205128No Hit
CCTCTCGTACATTCTGGG10.5128205128205128No Hit
CCCCCCCTTGTAACC10.5128205128205128No Hit
TGGTGATGATCTGACCCGGTGCACCATACA10.5128205128205128No Hit
ATCCCTCCACTTGTCCTTACGCACATAGAT10.5128205128205128No Hit
GGCCGTCGGTATTCCCTTCGCATCC10.5128205128205128No Hit
CACGTCGAGGCAATATCTTCCGCACTTCTT10.5128205128205128No Hit
TCCGCACTGCTCTTCACTCGT10.5128205128205128No Hit
CAGCATCCGCAGCCGGC10.5128205128205128No Hit
CCTCACCTCCTCATATATCCG10.5128205128205128No Hit
GGACCCCCTACTTCC10.5128205128205128No Hit
TTCAGACTTCTGCATTATGTGCATCT10.5128205128205128No Hit
CCCTCTAGCTGCAGAGTCGTTCA10.5128205128205128No Hit
CATGGCCACATCTGCTCTCGTGCCCCTAAGAGC10.5128205128205128No Hit
GACTCGATCGCATAGCCCAGGG10.5128205128205128No Hit
TTGCGCCCTCACCCGCGCCCACA10.5128205128205128No Hit
GTGCCCACCTCAGCGTACCTTTCCACGCGATCG10.5128205128205128No Hit
CACCCTCCCCACCCT10.5128205128205128No Hit
ACCCCGACCCCAATC10.5128205128205128No Hit
ACCCCCTCCCCACCCTCCTA10.5128205128205128No Hit
GGCCCAACGTTTCGCGTCTA10.5128205128205128No Hit
TTCTGACAGCATGGCCTACTCC10.5128205128205128No Hit
TTCGAACCTCCTGTCCCCACAGA10.5128205128205128No Hit
ACCTTGATCATACCCAAGGAC10.5128205128205128No Hit
TAACCAAGTTCCCTGCCTCTCCCACAT10.5128205128205128No Hit
TAACGACTCCGCAGGCGCACC10.5128205128205128No Hit
ACCGCCAGTATCGTCCTCTT10.5128205128205128No Hit
TTGGCCATCTGTACCTTTGCA10.5128205128205128No Hit
GCCCGTCGACTTCGTAACTT10.5128205128205128No Hit
CCCGTCGACTTCGTAACTTC10.5128205128205128No Hit
AAGGACTCCTTCCGCAATTCCGTCC10.5128205128205128No Hit
CCTCCATTCGAACCTCCTGTCCCCACAGA10.5128205128205128No Hit
GCCATCGTTCGCTTCTTACAGA10.5128205128205128No Hit
TAGGTCCCCGAACCCCAACCCATCGCGTAGCGCC10.5128205128205128No Hit
TCCCAGCCCGGTTTCTGACAGCATG10.5128205128205128No Hit
TCGAACCTCCTGTCCC10.5128205128205128No Hit
CCTGCCCTCCCCATCAT10.5128205128205128No Hit
TCTCCTCCTGCCCTAGCACGCTCT10.5128205128205128No Hit
TTGATAGATCGGGCGC10.5128205128205128No Hit
GGGACCCCATGCCTCCATTCGAACCTCCT10.5128205128205128No Hit
AAAGCAGCCGCCCCCTTACCC10.5128205128205128No Hit
ACTTCCTTCGCAACTCCCAGCC10.5128205128205128No Hit
AAGAGCATCTGAGGACAAGGAGT10.5128205128205128No Hit
TCGTCGTTCTTCGACAGGTTGGC10.5128205128205128No Hit
GCGAAGGAACTCAGC10.5128205128205128No Hit
GAGGGGCACACAAAGACAAT10.5128205128205128No Hit
GTTTCTGACAGCATGGCCTACTCCATAAC10.5128205128205128No Hit
CGCAGTGTCTCATACAGC10.5128205128205128No Hit
TCTTCCCACTCCCACGTTATCTTCCCATA10.5128205128205128No Hit
TTCCGCAGGTCGCCTAGC10.5128205128205128No Hit
TAGAGCTCGCACACCCCT10.5128205128205128No Hit
GTGGGGTGATGAGACC10.5128205128205128No Hit
CATATTCGGGTTCTGGG10.5128205128205128No Hit
ACCCCGTCAGTGCTT10.5128205128205128No Hit
CACCATGTCGGAGGCCCAACG10.5128205128205128No Hit
TGCCGCAGGCAGCGTTCCAGACC10.5128205128205128No Hit
ATCAACTTAGGTGTGAT10.5128205128205128No Hit
TGCATCTCATCCTTGACGGGCTGGA10.5128205128205128No Hit
CCGCAGGTCGCCTAG10.5128205128205128No Hit
CGAGCTGTAAGATGTT10.5128205128205128No Hit
TGACGGGCTGGAACAGGA10.5128205128205128No Hit
GCATTCTTACTAATCCGTTTCCGCAGGTCGCCTA10.5128205128205128No Hit
CGAAATTCGACTGATCTAGTGGCACCTTCCA10.5128205128205128No Hit
AGCGGATACTTGTTAGAGTG10.5128205128205128No Hit
CCCTATCAGCCTCTACCCCTGCCATCGTTCGC10.5128205128205128No Hit
CATTCTTACTAATCCGTT10.5128205128205128No Hit
GTAGCCCGTCGACTTCGTAACTTCGG10.5128205128205128No Hit
CAAGATCTTCAAGGATGT10.5128205128205128No Hit
CCCGTCAGTGCTTTCAGCATCTTAAC10.5128205128205128No Hit
ATTACCCAGCCCGACAGAGTCGAT10.5128205128205128No Hit
TTTGGCCATCTGTACCTTTGCAAT10.5128205128205128No Hit
TCTAGCTGCAGAGTCGTTCA10.5128205128205128No Hit
CCCCACAGAAGACGGTTGC10.5128205128205128No Hit
CAAAGGGCAAGCCGCTCGTAGATA10.5128205128205128No Hit
CGCCCGGCAGTACACC10.5128205128205128No Hit
CTATAGCCCTAAGCACCGCCAGTATCGTCCTCTT10.5128205128205128No Hit
AGACCCAAGGACTCC10.5128205128205128No Hit
AATGTCGTGGCTCTCAGATATACAGGCC10.5128205128205128No Hit
TTAGTGCCACCCCTTCCATAACAACGCTTGGAG10.5128205128205128No Hit
CGTGCCGCAGGCAGCGTTCCAGACC10.5128205128205128No Hit
GATGATGAGACCCTAT10.5128205128205128No Hit
TTTGATAGATCGGGCGCCA10.5128205128205128No Hit
CCTGTAGCCCGTCGACTTCGTAACTTCG10.5128205128205128No Hit
GACTCGCGCCGTCAGAACTGA10.5128205128205128No Hit
ATCACATGCTGCCTAACGGCCG10.5128205128205128No Hit
GCTGTAAGAGACCAA10.5128205128205128No Hit
TCCGCACTTCACCACCGGCCT10.5128205128205128No Hit
CAACACGGTCATTGTTCAACTCGTAAAGAT10.5128205128205128No Hit
CTTTCAGCATCTTAACGACTCCGCAGG10.5128205128205128No Hit
CTTCACCACCGGCCTTACCT10.5128205128205128No Hit
ATACGGACCGCACCCTGAG10.5128205128205128No Hit
GACTGGGTGGCAGTAGACGCC10.5128205128205128No Hit
CGCAGGCAGCGTTCCAGACCT10.5128205128205128No Hit
AGGCGTGAGTGCAAAGTCTGCAGCGTCG10.5128205128205128No Hit
CCGGAGTTTCGAGTAACATAA10.5128205128205128No Hit
AGCGTAACCCCGACC10.5128205128205128No Hit
GAGCTGTCCATCTCCACC10.5128205128205128No Hit
ATGTCTTTAATGTTGTAGA10.5128205128205128No Hit
GGGCCCCTGCAAACAGTGT10.5128205128205128No Hit
CAGCCTCTACCCCTGCCA10.5128205128205128No Hit
TGTGCCGCAGGCAGCGTTCCAGACCTCGTCGTT10.5128205128205128No Hit
CTCCACCCGCGAGGGACCCCATGCC10.5128205128205128No Hit
TATGTGCATCTCATCCTT10.5128205128205128No Hit
AGTGGTGTCTAATGT10.5128205128205128No Hit
GGTCCGGTGTATAGCGTCTCT10.5128205128205128No Hit
TGTGCCGCAGGCAGCG10.5128205128205128No Hit
CAATCGTCAACCCCTCTACTCCGACATGATCG10.5128205128205128No Hit
CTCTTCGTCTCTGGCC10.5128205128205128No Hit
GGGCCCACTCCCCGGTCACATACTGGATGAA10.5128205128205128No Hit
GTCGACTTCGTAACTTCGGCGG10.5128205128205128No Hit
AGATGTTGATCCTCCCCA10.5128205128205128No Hit
CCGAGCGTAGCCACTTTG10.5128205128205128No Hit
CAGGGTGTGCGTCTGCC10.5128205128205128No Hit
TGCCGCAGGCAGCGTTCCAGACCTCGTCG10.5128205128205128No Hit
GCAACCCCGACCCCAAT10.5128205128205128No Hit
AAACGGGCACGCGCACGTCCCGTGTATCTCC10.5128205128205128No Hit
GGTCTTGCGGCAATGAGGCCTTGTTCGTGACC10.5128205128205128No Hit
ATTACCCAGCCCGACACAGTCTTTGT10.5128205128205128No Hit
TTACCAATAGAGGGGCACACAAA10.5128205128205128No Hit
CGCTCGTAGATACGGACCGCACCCTGA10.5128205128205128No Hit
TCAGAACTGACTGGTCTTG10.5128205128205128No Hit
ACTTTAGTGCCACCCCTTCCATAACAACGCTT10.5128205128205128No Hit
TCTGGCCCAGCACCATGTTCCGTGACT10.5128205128205128No Hit
CCAAGTCACACGAACTCCTCCTAGCCTG10.5128205128205128No Hit
AGGCACTGTCGGGCTCTA10.5128205128205128No Hit
ATGGACCCCCTACTTCCTTCGCAAC10.5128205128205128No Hit
TTCGGGCGCCATCGGTCCC10.5128205128205128No Hit
GCAGGCAGCGTTCCAGACCTCGTCGTTCTT10.5128205128205128No Hit
CTCTCCGGGTCTTCTTC10.5128205128205128No Hit
CTTCCCTGAAAACTTG10.5128205128205128No Hit
ATCCCTCCACTTGTCCT10.5128205128205128No Hit
CCACCTCCCGCTCGACA10.5128205128205128No Hit
CCCCGCACCAGCCCCC10.5128205128205128No Hit
CTGTACCTTTGCAATGA10.5128205128205128No Hit
TTGGCCATCTGTACCTTTGCAATGACCTATTCCAG10.5128205128205128No Hit
CACACGAACTCCTCCTAGCCTGCCTG10.5128205128205128No Hit
GACAGCATGGCCTACTCC10.5128205128205128No Hit
CGCAGGCAGCGTTCCAGACCTCGTCGTTCTT10.5128205128205128No Hit
CAGAGGACCAGGCACTGT10.5128205128205128No Hit
ATAGCGTCTCTCTCCTCCTGC10.5128205128205128No Hit
TCCAGACCTCGTCGTTC10.5128205128205128No Hit
CAGAAGACGGTTGCCCCTAACT10.5128205128205128No Hit
TGGCCGGCGGTGCGGGGGCCT10.5128205128205128No Hit
CGGGTGGTGATGATCTGACC10.5128205128205128No Hit
TTGGGATGGAGTAGGGG10.5128205128205128No Hit
CAGCCCGGTTTCTGACAGCAT10.5128205128205128No Hit
CCGGTGTATAGCGTCTCTCT10.5128205128205128No Hit
TGCTGCAGCTGACTGGG10.5128205128205128No Hit
CCTCTTCGTCTCTGG10.5128205128205128No Hit
TGCCGCAGGCAGCGTTCCAGACCTCGTCGTTCTT10.5128205128205128No Hit
TCCAGACCTCGTCGTT10.5128205128205128No Hit
AAGCCGGAATGGACTCGCGCCG10.5128205128205128No Hit
GAACTCCTCCTAGCCTGCCTGCC10.5128205128205128No Hit
AGTATGGACCCCCTACTTCCTTCGCAACTCC10.5128205128205128No Hit
CTAGGGACCCCATGCCT10.5128205128205128No Hit
TCTGACCCGGTGCACCATACATTCCAAG10.5128205128205128No Hit
AGCCCGTCGACTTCGTAACTTCG10.5128205128205128No Hit
AGCACACGTCAGGACCTCAGC10.5128205128205128No Hit
GTAGGCCTTAACCAAGTTCCCT10.5128205128205128No Hit
CAGCCTCTACCCCTGCCATCGT10.5128205128205128No Hit
CCCCCCCGAACCCCAACCCA10.5128205128205128No Hit
TGCCGCAGGCAGCGTTCCAGACCTCGTCGTGATCG10.5128205128205128No Hit
CTGCCACTTACCTTGATCATACCCAAG10.5128205128205128No Hit
GGACCCCGACCCCAA10.5128205128205128No Hit
GACTCCGCAGGCGCACCCTTG10.5128205128205128No Hit
CTCCGGGTCTTCTTCCTCTTACC10.5128205128205128No Hit
CCGCACTGCTCTTCACTCGTA10.5128205128205128No Hit
CCACCCTCCTATACGT10.5128205128205128No Hit
GACGACGTCGTTGTGGT10.5128205128205128No Hit
TGATGTATCCCTGTAGCCCGTC10.5128205128205128No Hit
TCGACTGATCTAGTGGCA10.5128205128205128No Hit
CAACGTTTCGCGTCTATTCCGTACTTTA10.5128205128205128No Hit
CGAAATTCGACTGATCTAGTGGCACCTTCCACA10.5128205128205128No Hit
CACGCTTGCAACTTCTTCGCC10.5128205128205128No Hit
CCAACTCCGGTCCCTG10.5128205128205128No Hit
TCGACTGATCTAGTG10.5128205128205128No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)