FastQCFastQC Report
Sun 15 May 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2938
Sequences flagged as poor quality0
Sequence length15-35
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGGGTCGTCCGTC41514.125255275697754No Hit
CTGCCCACTGGGGTGTCGCGGCC401.3614703880190604No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCTCC130.4424778761061947No Hit
TGCCCACTGGGGTGTCGCGGCC130.4424778761061947No Hit
GGCAGGACGAACGAGCGATGGCGGTGGGTATCCTC130.4424778761061947No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCT110.37440435670524164No Hit
TTTGGCCGCTCCTCGAGGCGGAGCCCCGCGTCGAC110.37440435670524164No Hit
GCGGCCGCGGTACCCGAGTTGGG100.3403675970047651No Hit
CTCGGCGGCGAGGCG90.3063308373042886No Hit
CGCGCTCGCGCGCTGGGCGCGGACCAGGCGGCGC80.2722940776038121No Hit
CAGGACGAACGAGCGATGGCGGTGGGTATCCT80.2722940776038121No Hit
CGTGCGTGACACCTTCCGGTTGGCCGGCCTGACC80.2722940776038121No Hit
TTGAGGAGGAGGAGGAGGTCGCGGCGGATCC80.2722940776038121No Hit
GCGGCCGCGGTACCCGAGTTGG70.2382573179033356No Hit
CTTCCCCCTCCACCA70.2382573179033356No Hit
CTTCCGTCTGGTCCTCCGAAGCCT70.2382573179033356No Hit
TCTGGACCGAGACCCGAACGG70.2382573179033356No Hit
CTGGCGTGGTCTCTGTGACGGCC70.2382573179033356No Hit
TCGGCGTGCGTGACACCTTCCGGTTGGCCGGC70.2382573179033356No Hit
TTTCCGGTCTCTGTCGCGCC70.2382573179033356No Hit
CACTCGTGCTCAGAGGGGC60.2042205582028591No Hit
CCTGACTGCTGCCACAGACCTCATGCCTACGGACC60.2042205582028591No Hit
CGCGGACCAGGCGGCGC60.2042205582028591No Hit
CCACGACTTGGTAGAACGGGC60.2042205582028591No Hit
TTTTCCGGTCTCTGTCGCGC60.2042205582028591No Hit
GCTCGCGCGCTGGGCGCGGACCAGGCGGCG60.2042205582028591No Hit
TTTTCCGGTCTCTGTCGCGCC60.2042205582028591No Hit
CAGGACGAACGAGCGATGGCGGTGGGTATCCTCC60.2042205582028591No Hit
GCGGCCGCGGTACCCGAGTTGGGCAG50.17018379850238255No Hit
CGCTTCTGGACCGAGACCCGAACGGG50.17018379850238255No Hit
GACACCTTCCGGTTGGCCGGCC50.17018379850238255No Hit
AGCCCCGCGTCGACC50.17018379850238255No Hit
GTGCGTGACACCTTCCGGTTGGCCGGCCT50.17018379850238255No Hit
ACGACGAGCGGAGACA50.17018379850238255No Hit
AGGGCGACACTTCGGGT50.17018379850238255No Hit
CTCGTGATCCGCGGGCC50.17018379850238255No Hit
TGCTGCCACAGACCTCATGCCTACGGACC50.17018379850238255No Hit
CCGCCGACCTGACTGCTGCCACAGACCTCATGCCT50.17018379850238255No Hit
AGGACGAACGAGCGATGGCGGTGGGT50.17018379850238255No Hit
TGACTGCTGCCACAGACCTCATGCCTACGGACC50.17018379850238255No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCTCCG50.17018379850238255No Hit
CGCGGTGCCGGAACAGCTGCTGGACC50.17018379850238255No Hit
CTGGTCCTCCGAAGCCT50.17018379850238255No Hit
GGACGAACGAGCGATGGCGGTGGGTATCCTC40.13614703880190604No Hit
CTCCTTCCGTCTGGTCCTCCGAAGCCT40.13614703880190604No Hit
CCACGTCGTCAGGAGTCTCCGGGGAAGCG40.13614703880190604No Hit
TTCGGAAGGGGGCCC40.13614703880190604No Hit
ATGGGACTCCTTCCGTCTGGTCCTCCGAAGCC40.13614703880190604No Hit
GCGGACCAGGCGGCGC40.13614703880190604No Hit
CTGGCGTGGTCTCTGTGAC40.13614703880190604No Hit
GGTCGCGGCGGATCCCCC40.13614703880190604No Hit
ACGCCGTCATTCGAAGAGCGCTCGCC40.13614703880190604No Hit
GATAAACCCTCCCCCTGGCC40.13614703880190604No Hit
CTGAACCTCTACAACCTGGCCACC40.13614703880190604No Hit
GTCCTCCGGAGATCTCTCGGGC40.13614703880190604No Hit
TCCGGTCTCTGTCGCGCC40.13614703880190604No Hit
CTTCCGTCTGGTCCTCCGAAGCCTCTTCCCTCGCT40.13614703880190604No Hit
CGATGGCGGATGTGCTGTACT40.13614703880190604No Hit
TTTCTCCGCTGTAATCGACCA40.13614703880190604No Hit
TCCCGGGTGGCCAAGGATCTC40.13614703880190604No Hit
ACGAACGAGCGATGGCGGTGGGTATCCT40.13614703880190604No Hit
GGACGAACGAGCGATGGCGGTGGGTATCCTCC40.13614703880190604No Hit
CCGGTCTCTGTCGCGCC40.13614703880190604No Hit
ATGGGACTCCTTCCGTCTGGTCCTCCGAAGCCT40.13614703880190604No Hit
TTCTGGACCGAGACCCGAACGG40.13614703880190604No Hit
GCGCTCGCGCGCTGGGCGCGGACCAGGCGGC40.13614703880190604No Hit
GAGGCAGGACGAACGAGCGATGGCGGTGGGTA40.13614703880190604No Hit
GTCATGGCTGAACCACGACTTGGTAGAACGGGC40.13614703880190604No Hit
ATCCCACTTCGCGGTGCCGGAACAGCTGCTGGACC40.13614703880190604No Hit
TCGTGATCCGCGGGCC40.13614703880190604No Hit
AGCCCCGCGTCGACCT40.13614703880190604No Hit
CTTCCGTCTGGTCCTCCGAAGCCTCTTCC40.13614703880190604No Hit
CCGCCAACGCCCCGACCCT40.13614703880190604No Hit
TCCCCCCCCCGTGCC40.13614703880190604No Hit
CTGCCCACTGGGGTGTCGCGGC40.13614703880190604No Hit
GGAGCCCCGCGTCGACCT40.13614703880190604No Hit
GCCCACTGGGGTGTCGCGGCC40.13614703880190604No Hit
CTGAACCACGACTTGGTAGAACGGGCA40.13614703880190604No Hit
ATGACCTGGCCGCAGCCTTCTCGCCCGA40.13614703880190604No Hit
TTCAGGCCCCCTTCGCGGAC40.13614703880190604No Hit
ATGACCTGGCCGCAGCCTTCTCGCCCGAG40.13614703880190604No Hit
CTTGCCACCGCGGACCTCGC40.13614703880190604No Hit
TTGGCCGCTCCTCGAGGCGGAGCCCCGCGTCGAC40.13614703880190604No Hit
CAGGACGAACGAGCGATGGCGGTGGGTATCCTCCG30.10211027910142954No Hit
GCTCGCGCGCTGGGCGCGGACCAGGCGGC30.10211027910142954No Hit
CTTCAGGCCCCCTTCGCGGAC30.10211027910142954No Hit
CAAGGATCTCCTCTGGCAGG30.10211027910142954No Hit
CAAGGATCTCCTCTGGCAGGATCTCACCCTTCC30.10211027910142954No Hit
TTCGAGCGTCTGGTCGGGCGGACAGTGGCCC30.10211027910142954No Hit
AAGGTCGGCGTGCGTGACACCTTCCGGTTGGCC30.10211027910142954No Hit
CGGCGTGCGTGACACCTTCCGGTTGGCCGGC30.10211027910142954No Hit
GACACCTTCCGGTTGGCCGGCCTGAC30.10211027910142954No Hit
CTACAACCTTGCCACCGCGGACCTCGC30.10211027910142954No Hit
ACGACTTGGTAGAACGGGC30.10211027910142954No Hit
CTGGGCCCGCTTCTGGACC30.10211027910142954No Hit
AGGAGGAGGAGGAGGTCGCGGCGGATCC30.10211027910142954No Hit
CTCAAGGTGGACTCCGACCCGTGGAGACAGGG30.10211027910142954No Hit
TCTCCGAGGAGCTCGAACGTC30.10211027910142954No Hit
CTTGCGCGAATGGATCTCCACC30.10211027910142954No Hit
GGGTCATGGCTGAACCACGACTTGGTAGAACGGGC30.10211027910142954No Hit
CCGGTGCGCGCGGCCGCGGTACCCGAGTTGGG30.10211027910142954No Hit
CAAGGATCTCCTCTGGCAGGATCTCACCC30.10211027910142954No Hit
CTTCCGTCTGGTCCTCCGAAGCC30.10211027910142954No Hit
CGTCACGGCTCCGCCTGCCCACTGGGGTGTCGCGG30.10211027910142954No Hit
CCTGGTATACGGAGGGCC30.10211027910142954No Hit
CATGGCTGAACCACGACTTGGTAGAACGGGCAGTT30.10211027910142954No Hit
CGAACGTCTTCGGAAGGGGGCCC30.10211027910142954No Hit
CTTGCCACCGCGGACCTCGCC30.10211027910142954No Hit
CTGAACCACGACTTGGTAGAACGGGC30.10211027910142954No Hit
CCTCTGGCGTGGTCTCTGTGACGGCCT30.10211027910142954No Hit
CGCACTCAAGGTGGACTCCGACCCGTGGAGACA30.10211027910142954No Hit
CGCGCTCGCGCGCTGGGCGCGGACCAGGCGGCG30.10211027910142954No Hit
CGCGCTCGCGCGCTGGGCGCGGACCAGGCGGC30.10211027910142954No Hit
TTCTCGTCGTCCGCCGCTGTGGC30.10211027910142954No Hit
CCGCTCCTCGAGGCGGAGCCCCGCGTCGACC30.10211027910142954No Hit
ACACCTTCCGGTTGGCCGGCC30.10211027910142954No Hit
GCGGCCGCGGTACCCGAGTT30.10211027910142954No Hit
TCCCCGTGAGACACCTCCTCCCC30.10211027910142954No Hit
CTGGGCCCGCTTCTGGA30.10211027910142954No Hit
TCAAGGTCGGCGTGCGTGACA30.10211027910142954No Hit
CTGGAAATATTGAGGAGGAGG30.10211027910142954No Hit
CTTGGTAGAACGGGC30.10211027910142954No Hit
GGTCTCCGAGGAGCTCGAACGTC30.10211027910142954No Hit
CTGACTGCTGCCACAGACCTCATGCCTACGGACC30.10211027910142954No Hit
ATCGGCTTCCGGTGCGCGCGGCCGCGGTACCC30.10211027910142954No Hit
CCGCGGACCTCGCCTGTGTCG30.10211027910142954No Hit
TTGCCCCCGGCGATGGCGGACGTGCTGTACTCTGC30.10211027910142954No Hit
CCTCGCTCGTGATCCGCG30.10211027910142954No Hit
CCCTGAGGGATTCGTCGGCGTGCAGGCGATCGA30.10211027910142954No Hit
TCCCACTTCGCGGTGCCGGAACAGCTGCTGGACC30.10211027910142954No Hit
TGACCTGGCCGCAGCCTTCTCGCCC30.10211027910142954No Hit
CAGCGGAAGGCGCTCTGGGA30.10211027910142954No Hit
TCGGGCGGACAGTGGCCCCCCTCGGCACGC30.10211027910142954No Hit
GCGCTCGCGCGCTGGGCGCGGACCAGGCGGCG30.10211027910142954No Hit
TGCTGCCACAGACCTCATGCCTACGGACCT30.10211027910142954No Hit
GACAGCGGAAGGCGCTCTGGGATTTGGCGC30.10211027910142954No Hit
CGGCTCCGCCTGCCCACTGGGGT30.10211027910142954No Hit
TCTCGTCGTCCGCCGCTGTGG30.10211027910142954No Hit
CGGCCCTCTGGCGTGGTCTCTGTGACGGCCT30.10211027910142954No Hit
AGGTCGGCGTGCGTGACACCTTCCGGTTGGCC30.10211027910142954No Hit
ACACCTTCCGGTTGGCCGGCCTGAC30.10211027910142954No Hit
GCAGGACGAACGAGCGATGGCGGTGGGTATCCT30.10211027910142954No Hit
AAACCCTCCCCCTGGCC30.10211027910142954No Hit
CCGTCCTTGGATCCTTCTCGTCGTCCGCCGCTG30.10211027910142954No Hit
TCCGGTGCGCGCGGCCGCGGTACCCGAGTTGGGCA30.10211027910142954No Hit
CTTTTCCGGTCTCTGTCGCGCCGTACTGAGC30.10211027910142954No Hit
CGTGATCCGCGGGCCC30.10211027910142954No Hit
GTAGATCGGAGTCAGGCGGC30.10211027910142954No Hit
TCGTGATCCGCGGGCCC30.10211027910142954No Hit
GAGCCCCGCGTCGACCT30.10211027910142954No Hit
TCCCCGTGAGACACCTCCTC30.10211027910142954No Hit
CGCACGTGGAGGTCGTAGGA30.10211027910142954No Hit
GGATCCTTCTCGTCGTCCGCCGCTG30.10211027910142954No Hit
CCGTCCGACGAAGGGCTGCCC30.10211027910142954No Hit
CATGGCTGAACCACGACTTGGTAGGACGGGC30.10211027910142954No Hit
TTCCGTCTGGTCCTCCGAAGCCTC30.10211027910142954No Hit
CGCCCCGACCCTCGCTCGTGATCCGCGG30.10211027910142954No Hit
GCGGTCCCGATGGAGGAGGCTA30.10211027910142954No Hit
GAGGAGGAGGAGGAGGTCGCGGCGGATC30.10211027910142954No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCTC30.10211027910142954No Hit
CGTCCGCCGCTGTGGC30.10211027910142954No Hit
AACGGGGGTCCCTGCCCGCTGGGCGCGTCCACTC30.10211027910142954No Hit
CTTCTGGACCGAGACCCGAACGGGGACC30.10211027910142954No Hit
TTCCGTCTGGTCCTCCGAAGCCT30.10211027910142954No Hit
CGCTTGCGTCGCGGTTC30.10211027910142954No Hit
GAAGGCGCTCTGGGATTTGGC30.10211027910142954No Hit
GTCTGGTCGGGCGGACAGT30.10211027910142954No Hit
CCGGAATGCTGAAGTGGGGGG30.10211027910142954No Hit
CTTCCGTCTGGTCCTCCGAAGCCTC30.10211027910142954No Hit
ACCACGACTTGGTAGAACGGGC30.10211027910142954No Hit
TGGGGGTCGTCCGTC30.10211027910142954No Hit
CTCCGGAGATCTCTCGGGCTTTCGAGACC30.10211027910142954No Hit
CTGGGCGGCGCCGGGTTCCCTCACCCGAAAGGG30.10211027910142954No Hit
CTGGGCCCGCTTCTGGACCGAGACCCGAAC30.10211027910142954No Hit
CGCTTGCGCGAATGGATCTCCA30.10211027910142954No Hit
CTTCGCGGTGCCGGAACAGCTGCTGGACCA30.10211027910142954No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGTCGT452.9751754E-616.5517234
CGGGGGT452.9751754E-616.5517231
GTCCGTC452.9751754E-616.5517239
GGGGGTC452.9751754E-616.5517232
GGGGTCG452.9751754E-616.5517233
CGTCCGT452.9751754E-616.5517238
GGTCGTC452.9751754E-616.5517235
GTCGTCC552.0198115E-513.542326
TCGTCCG552.0198115E-513.542327