FastQCFastQC Report
Sun 15 May 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences306
Sequences flagged as poor quality0
Sequence length15-34
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGAAGGATCCAAGGACGGA216.862745098039216No Hit
ACGAGAAGGATCCAAGGACGG113.594771241830065No Hit
CGAGAGATCTCCGGAGGACGG103.2679738562091507No Hit
CCTCCTCCTCCTCCT92.941176470588235No Hit
CTTCCTCCTCCTCCTC61.9607843137254901No Hit
TCCTCCTCCTCCTCCT61.9607843137254901No Hit
CAGGATCCTCGATCGCCT41.3071895424836601No Hit
TCCTCGATCGCCTGCACGCCG41.3071895424836601No Hit
TTCCTCCTCCTCCTC41.3071895424836601No Hit
CATCCTCCTCCTCCT30.9803921568627451No Hit
ACTTCAGCATTCCGGC30.9803921568627451No Hit
GGAGATCGCGGCACTC30.9803921568627451No Hit
AAGACGTTCGAGCTCCTCGGA30.9803921568627451No Hit
TCCCCGGAGACTCCTGACGAC30.9803921568627451No Hit
CCTCCTCCTCCTCCTC30.9803921568627451No Hit
CTCTCCTCCTCCTCCTC30.9803921568627451No Hit
CCGAGAGATCTCCGGAGGACGGACGAC30.9803921568627451No Hit
TACATGACCCCACCGGCG30.9803921568627451No Hit
TCCTCCTCCTCCTCCTC30.9803921568627451No Hit
TCGGGATCCTCGTCGACG30.9803921568627451No Hit
CTACGTGCGTGCCGA30.9803921568627451No Hit
CGAGAAGGATCCAAGGA30.9803921568627451No Hit
TTCCCCGGAGACTCCTGACGA30.9803921568627451No Hit
CACGAGACACCTCCCCCAGCT30.9803921568627451No Hit
TACTCCTCCTCCTCCT20.6535947712418301No Hit
ATCCAGCTCAGGACGCGCCA20.6535947712418301No Hit
TCGGGATCCTCGTCGACGGTAAATTCGCCCCGGT20.6535947712418301No Hit
CTCCTCCTCCTCCTC20.6535947712418301No Hit
TGCGCCGCCTGGTCCG20.6535947712418301No Hit
GGTCTCGGAAGGGCGGGTAGC20.6535947712418301No Hit
TGTAAGGGCCCGCGGATC20.6535947712418301No Hit
AATAAGGTCCGTAGGCATGAG20.6535947712418301No Hit
GCAGCCCTTCGTCGGA20.6535947712418301No Hit
CCCGAAAGGTCGACGCGGGGC20.6535947712418301No Hit
CGTTCGAGCTCCTCGGA20.6535947712418301No Hit
TTTCCTTGTCTCCGCTCGTCGTGCC20.6535947712418301No Hit
TCCCCGGAGACTCCTGACGA20.6535947712418301No Hit
AAGGTCCGTAGGCATGAGGTC20.6535947712418301No Hit
TTCGGGTCTCGGTCCAGAAGCC20.6535947712418301No Hit
TAAACCGTCTCGGAGTGA20.6535947712418301No Hit
GACGAGAAGGATCCAAGGACG20.6535947712418301No Hit
TAACTCCCCCGTCGACACAGG20.6535947712418301No Hit
TTGTCTCCGCTCGTCGTGCCCC20.6535947712418301No Hit
AGAGGCTTCGGAGGACCAGACGGAAGG20.6535947712418301No Hit
AGCACGAGTGGTCAGAGGGCC20.6535947712418301No Hit
CGATCTACGGGCGGCC20.6535947712418301No Hit
GGAGATCGCGGCACTCGG20.6535947712418301No Hit
CGACGAGAAGGATCCAAGGACGG20.6535947712418301No Hit
AAGCTCTCCTACGACCT20.6535947712418301No Hit
CCTTCCGGATAGCGTCGGCCGCGAC20.6535947712418301No Hit
TCTCTCCTCCTCCTCCT10.32679738562091504No Hit
ATATTCGGAGTAGGACTTGACCAGACGC10.32679738562091504No Hit
TCGCCGGGGGCAGGACCG10.32679738562091504No Hit
TGGTAAACCGTCTCGGAGTGA10.32679738562091504No Hit
TAATAAGGTCCGTAGGCATGA10.32679738562091504No Hit
TCCAAGGACGGACGCCCGAGT10.32679738562091504No Hit
TCACCCCCATCCCCCCCAC10.32679738562091504No Hit
GTAATAAGGTCCGTAGGCATG10.32679738562091504No Hit
GGAGATCGCGGCACTCGGCC10.32679738562091504No Hit
CCGAGAGATCTCCGGAGGACG10.32679738562091504No Hit
TCCGCCATCGCCGGGGG10.32679738562091504No Hit
CATCGAAGGGACGGATTCTCCGGGGGTC10.32679738562091504No Hit
TCAGGGGGATCCGCC10.32679738562091504No Hit
TACGACCTCCACGTGCGTGCCT10.32679738562091504No Hit
GGGTCAAGGGGCGCT10.32679738562091504No Hit
TACCCTCCCGAAACTCCCCAT10.32679738562091504No Hit
CATCATCGAAGGGACGGATTCTCCGGGGGTCCC10.32679738562091504No Hit
AGGAGGTGTCTCACGGGGAT10.32679738562091504No Hit
CCTGCTCTGGCGGAGGCACCG10.32679738562091504No Hit
GAGATCGCGGCACTCG10.32679738562091504No Hit
ATGGTGGAGGGGGAA10.32679738562091504No Hit
AACTTGTCCGCGAAGGGGGC10.32679738562091504No Hit
AGGACGGACGACCCC10.32679738562091504No Hit
CACGGGTCTCGGAAGGGC10.32679738562091504No Hit
GCCACAGCGGCGGACG10.32679738562091504No Hit
TCTGACGGGCACGGGG10.32679738562091504No Hit
AAGGGACGGATTCTCCGGGGG10.32679738562091504No Hit
CCCCCAGCTCCTTGCCCC10.32679738562091504No Hit
GGGGCCCTCCGTATACCAGGT10.32679738562091504No Hit
CCCCTCCTCCTCCTC10.32679738562091504No Hit
AAGAGGCTTCGGAGGACC10.32679738562091504No Hit
ATCCCCCCCACGTGCCC10.32679738562091504No Hit
GATCCGGTACTGTCGGA10.32679738562091504No Hit
AGTGGACGCGCCCAGCGGGCA10.32679738562091504No Hit
TCTCCTCCTCCTCCT10.32679738562091504No Hit
CGCGTAAGCGGGCAGCCCTTCGTCGGA10.32679738562091504No Hit
CGACGAGAAGGATCCAAGGAC10.32679738562091504No Hit
GAGAAGGATCCAAGGACGGAC10.32679738562091504No Hit
AGCACGAGTGGTCAGAGG10.32679738562091504No Hit
ACTCCCCATCACCCCCATCCCCT10.32679738562091504No Hit
CGGCAATATTCGGAGTAGGACTTGACCAGACG10.32679738562091504No Hit
ATCCCTCAGGGGGATCCGCCGCGACC10.32679738562091504No Hit
AGTGGACGCGCCCAGCGGGCAG10.32679738562091504No Hit
TGAACCGTCTCGGAGTGA10.32679738562091504No Hit
CGCGAAGTGGGACCC10.32679738562091504No Hit
TCGCTCTGGGTCGTCGCCC10.32679738562091504No Hit
GGCGCAACGTCTCATTCCTCC10.32679738562091504No Hit
CTCCGGAGGACGGACGACCCC10.32679738562091504No Hit
TCATCCAGCTCAGGACGCGCC10.32679738562091504No Hit
ACAGGCGAGGTCCGCGGTGGC10.32679738562091504No Hit
TCCGCTCGTCGTGCCC10.32679738562091504No Hit
TCTCTTGTTCTTGCCGCGCCT10.32679738562091504No Hit
TCTCCACGGGTCGGAGTCCAC10.32679738562091504No Hit
GAGAAGGATCCAAGGACGGA10.32679738562091504No Hit
CACGCTCAGTACGGC10.32679738562091504No Hit
TTCTTGCCGCGCCTCTGACGG10.32679738562091504No Hit
CTTCCCGCGGAGGCGAGG10.32679738562091504No Hit
TCGGGATCCTCGTCGAC10.32679738562091504No Hit
CCCAGGATCCTCGATCGCCTG10.32679738562091504No Hit
CGAGACACCTCCCCCAGCTCCTTGCCCCCTGGG10.32679738562091504No Hit
GTCTCGGAAGGGCGGGTAGCT10.32679738562091504No Hit
TCGTCCGCCATCGCCGGGGGC10.32679738562091504No Hit
CCTTGTCTCCGCTCGTCGTGCC10.32679738562091504No Hit
CCGCTCGTCGTGCCCCTCGGG10.32679738562091504No Hit
GGAGGAGGAGCGGCC10.32679738562091504No Hit
TACTCGCCGGAGATCGCGGCACTCGG10.32679738562091504No Hit
TCGGCCGCGACACCCCAGTGG10.32679738562091504No Hit
GTTTCCGTTGTCCGC10.32679738562091504No Hit
GAGAAGGATCCAAGGAC10.32679738562091504No Hit
CGGCGGACGACGAGAAGGATCCAAGGA10.32679738562091504No Hit
TCCTGCCAGAGGAGATCCTTGG10.32679738562091504No Hit
ATCGGGATCCTCGTCGAC10.32679738562091504No Hit
AAGGGCCCGCGGATCACGAGC10.32679738562091504No Hit
CGGAGTGGACGCGCCCAGCG10.32679738562091504No Hit
AACTCCCCCGTCGACACAGGC10.32679738562091504No Hit
CGGAGACTCCTGACGACATGG10.32679738562091504No Hit
CATCCTCCTCCTCCTC10.32679738562091504No Hit
TCTCTCCTCCTCCTCC10.32679738562091504No Hit
ATGAGGTCTGTGGCGGCAGTC10.32679738562091504No Hit
TGGCCTCTTCCCGCGGAGGCGAGGGC10.32679738562091504No Hit
CATGGAACCTCGCAGC10.32679738562091504No Hit
ACAGCCCCTCTGAGCACGAGT10.32679738562091504No Hit
AGTGGGCAGGCGGAGC10.32679738562091504No Hit
CGAGAAGGATCCAAGGACGG10.32679738562091504No Hit
AACCGTCTCGGAGTGAAGAGC10.32679738562091504No Hit
CCCGGAGACTCCTGACGACATG10.32679738562091504No Hit
CTTCCTCCTCCTCCT10.32679738562091504No Hit
AGAGGGGATCGGCCGCCT10.32679738562091504No Hit
CGGGACAGCCTCGGAGCC10.32679738562091504No Hit
CGGAGCCCTGCTCTGGCGGAG10.32679738562091504No Hit
CGAGAAGGATCCAAGGACGGAC10.32679738562091504No Hit
TCGGTCCAGAAGCGGGC10.32679738562091504No Hit
GCCACAGCGGCGGACGACGAGAAGGATC10.32679738562091504No Hit
TCCGAAGACGTTCGAGCTCCT10.32679738562091504No Hit
AGCACGGGTCTCGGAAGGGC10.32679738562091504No Hit
ACCTCCTCCTCCTCCTC10.32679738562091504No Hit
TGGTCATGGAACCTCGCAGCGG10.32679738562091504No Hit
CGCGGCAATATTCGGAGTAGGACTTGACCA10.32679738562091504No Hit
CGCGGTGATCAGCCACTCGTACCGGGC10.32679738562091504No Hit
AGGATACCCACCGCCATC10.32679738562091504No Hit
CACGGGTCTCGGAAGGG10.32679738562091504No Hit
CTCCAAGCGAGGGAAGAGGCTTCGGA10.32679738562091504No Hit
GCACATCCGCCATCGCCGGGG10.32679738562091504No Hit
CACGTGCCCCAGGATCCTCGA10.32679738562091504No Hit
GTGGACGCGCCCAGCGGGCA10.32679738562091504No Hit
CTTTCGGGTGAGGGAACCCGGCGCCGCC10.32679738562091504No Hit
GAGGGTCGGGGCGTTGGCG10.32679738562091504No Hit
CGACGAGAAGGATCCAAGGACA10.32679738562091504No Hit
CCAACTCGGGTACCGCGGCCGCGCGCACCGGA10.32679738562091504No Hit
TACGGGCGGCCGAGGAGTACC10.32679738562091504No Hit
ATCGGCCGCCTGACTCCGATCT10.32679738562091504No Hit
CAGGCCCACCGTGCGGG10.32679738562091504No Hit
CGGGAAGGGGGAGATCCTGCC10.32679738562091504No Hit
GCCATCCCCGCGGAC10.32679738562091504No Hit
TTCGGAGGACCAGACGGAAGG10.32679738562091504No Hit
ACCCCCATCCCCCCCACGTGC10.32679738562091504No Hit
AGGACTTGACCAGACGCAACG10.32679738562091504No Hit
CCTCTGAGCACGAGTGGTCAG10.32679738562091504No Hit
CGCCTTATTGCCCAACTC10.32679738562091504No Hit
ACCCACCGCCATCGCTCGTTCGTCCTGC10.32679738562091504No Hit
CTCGAGAAGCTCCGAGCGCGC10.32679738562091504No Hit
GTCTGTCGGAACCGCGA10.32679738562091504No Hit
TCCTTGTCTCCGCTCGTCGTG10.32679738562091504No Hit
GGCCAGGTCATCCCCGCGGAC10.32679738562091504No Hit
CAGGGCCCGCGGATCACGA10.32679738562091504No Hit
TCGGGCGAGAAGGCTGCGGCC10.32679738562091504No Hit
CTGACTCCGATCTACGGGCGGCCGAGG10.32679738562091504No Hit
TCCCCCCCACGTGCCCCAGGA10.32679738562091504No Hit
AACTCGGGTACCGCGGCCGCGCGCACCGGAAG10.32679738562091504No Hit
ACCAGGTTCCCTACCCTCCC10.32679738562091504No Hit
CAGCCCTTCGTCGGACGGACC10.32679738562091504No Hit
TTGTCCTGGTCATGCCCT10.32679738562091504No Hit
CGGGAAGGGTGAGATCCTGCC10.32679738562091504No Hit
CGCAGCGGATCCGGCGACGTC10.32679738562091504No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)