##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	S38_SantoTomePrincipe.sRNAs.15-35nt.Partitivirus_2_segment_1.forward-mapped.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53
Sequences flagged as poor quality	0
Sequence length	15-35
%GC	53
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	34.9622641509434	NaN	NaN	NaN	NaN	NaN
2	35.339622641509436	NaN	NaN	NaN	NaN	NaN
3	35.79245283018868	NaN	NaN	NaN	NaN	NaN
4	36.283018867924525	NaN	NaN	NaN	NaN	NaN
5	36.0188679245283	NaN	NaN	NaN	NaN	NaN
6	36.094339622641506	NaN	NaN	NaN	NaN	NaN
7	36.0188679245283	NaN	NaN	NaN	NaN	NaN
8	35.56603773584906	NaN	NaN	NaN	NaN	NaN
9	35.60377358490566	NaN	NaN	NaN	NaN	NaN
10	36.283018867924525	NaN	NaN	NaN	NaN	NaN
11	35.60377358490566	NaN	NaN	NaN	NaN	NaN
12	35.56603773584906	NaN	NaN	NaN	NaN	NaN
13	35.83018867924528	NaN	NaN	NaN	NaN	NaN
14	35.83018867924528	NaN	NaN	NaN	NaN	NaN
15	35.60377358490566	NaN	NaN	NaN	NaN	NaN
16	35.08695652173913	NaN	NaN	NaN	NaN	NaN
17	35.34782608695652	NaN	NaN	NaN	NaN	NaN
18	36.21739130434783	NaN	NaN	NaN	NaN	NaN
19	36.40909090909091	NaN	NaN	NaN	NaN	NaN
20	36.095238095238095	NaN	NaN	NaN	NaN	NaN
21	36.095238095238095	NaN	NaN	NaN	NaN	NaN
22	35.10526315789474	NaN	NaN	NaN	NaN	NaN
23	36.6	NaN	NaN	NaN	NaN	NaN
24	35.90909090909091	NaN	NaN	NaN	NaN	NaN
25	35.5	NaN	NaN	NaN	NaN	NaN
26	37.0	NaN	NaN	NaN	NaN	NaN
27	33.285714285714285	NaN	NaN	NaN	NaN	NaN
28	37.0	NaN	NaN	NaN	NaN	NaN
29	37.0	NaN	NaN	NaN	NaN	NaN
30	37.0	NaN	NaN	NaN	NaN	NaN
31	37.0	NaN	NaN	NaN	NaN	NaN
32	37.0	NaN	NaN	NaN	NaN	NaN
33	37.0	NaN	NaN	NaN	NaN	NaN
34	37.0	NaN	NaN	NaN	NaN	NaN
35	37.0	NaN	NaN	NaN	NaN	NaN
>>END_MODULE
>>Per tile sequence quality	pass
#Tile	Base	Mean
2138	1	NaN
2138	2	0.0
2138	3	0.0
2138	4	0.0
2138	5	0.0
2138	6	0.0
2138	7	0.0
2138	8	NaN
2138	9	0.0
2138	10	0.0
2138	11	0.0
2138	12	NaN
2138	13	0.0
2138	14	NaN
2138	15	0.0
2138	16	0.0
2138	17	0.0
2138	18	0.0
2138	19	0.0
2138	20	0.0
2138	21	0.0
2138	22	1.2000000000000002
2138	23	3.6
2169	1	NaN
2169	2	0.0
2169	3	0.0
2169	4	0.0
2169	5	0.0
2169	6	0.0
2169	7	0.0
2169	8	NaN
2169	9	0.0
2169	10	0.0
2169	11	0.0
2169	12	NaN
2169	13	0.0
2169	14	NaN
2169	15	0.0
2169	16	0.0
2169	17	0.0
2169	18	0.0
2169	19	0.0
2169	20	0.0
2169	21	0.0
2169	22	1.2000000000000002
2169	23	-2.4
2220	1	NaN
2220	2	0.0
2220	3	0.0
2220	4	0.0
2220	5	0.0
2220	6	0.0
2220	7	0.0
2220	8	NaN
2220	9	0.0
2220	10	0.0
2220	11	0.0
2220	12	NaN
2220	13	0.0
2220	14	NaN
2220	15	0.0
2220	16	0.0
2220	17	0.0
2220	18	0.0
2220	19	0.0
2220	20	0.0
2220	21	0.0
2220	22	-4.8
2220	23	-2.4
2257	1	NaN
2257	2	0.0
2257	3	0.0
2257	4	0.0
2257	5	0.0
2257	6	0.0
2257	7	0.0
2257	8	NaN
2257	9	0.0
2257	10	0.0
2257	11	0.0
2257	12	NaN
2257	13	0.0
2257	14	NaN
2257	15	0.0
2257	16	0.0
2257	17	0.0
2257	18	0.0
2257	19	0.0
2257	20	0.0
2257	21	0.0
2257	22	1.2000000000000002
2257	23	-2.4
2268	1	NaN
2268	2	0.0
2268	3	0.0
2268	4	0.0
2268	5	0.0
2268	6	0.0
2268	7	0.0
2268	8	NaN
2268	9	0.0
2268	10	0.0
2268	11	0.0
2268	12	NaN
2268	13	0.0
2268	14	NaN
2268	15	0.0
2268	16	0.0
2268	17	0.0
2268	18	0.0
2268	19	0.0
2268	20	0.0
2268	21	0.0
2268	22	1.2000000000000002
2268	23	3.6
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
27	1.0
28	3.0
29	0.0
30	0.0
31	0.0
32	2.0
33	0.0
34	0.0
35	9.0
36	12.0
37	26.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	5.660377358490567	15.09433962264151	75.47169811320755	3.7735849056603774
2	15.09433962264151	32.075471698113205	39.62264150943396	13.20754716981132
3	30.18867924528302	24.528301886792452	33.9622641509434	11.320754716981133
4	50.943396226415096	22.641509433962266	15.09433962264151	11.320754716981133
5	26.41509433962264	33.9622641509434	11.320754716981133	28.30188679245283
6	15.09433962264151	22.641509433962266	37.735849056603776	24.528301886792452
7	37.735849056603776	24.528301886792452	26.41509433962264	11.320754716981133
8	30.18867924528302	30.18867924528302	11.320754716981133	28.30188679245283
9	18.867924528301888	20.754716981132077	16.9811320754717	43.39622641509434
10	30.18867924528302	37.735849056603776	15.09433962264151	16.9811320754717
11	32.075471698113205	20.754716981132077	15.09433962264151	32.075471698113205
12	35.84905660377358	24.528301886792452	11.320754716981133	28.30188679245283
13	26.41509433962264	20.754716981132077	15.09433962264151	37.735849056603776
14	11.320754716981133	13.20754716981132	37.735849056603776	37.735849056603776
15	32.075471698113205	3.7735849056603774	22.641509433962266	41.509433962264154
16	23.91304347826087	15.217391304347828	4.3478260869565215	56.52173913043478
17	34.78260869565217	17.391304347826086	21.73913043478261	26.08695652173913
18	34.78260869565217	15.217391304347828	26.08695652173913	23.91304347826087
19	27.27272727272727	15.909090909090908	29.545454545454547	27.27272727272727
20	33.33333333333333	9.523809523809524	30.952380952380953	26.190476190476193
21	21.428571428571427	40.476190476190474	16.666666666666664	21.428571428571427
22	31.57894736842105	26.31578947368421	21.052631578947366	21.052631578947366
23	23.333333333333332	36.666666666666664	20.0	20.0
24	18.181818181818183	18.181818181818183	9.090909090909092	54.54545454545454
25	37.5	0.0	25.0	37.5
26	14.285714285714285	0.0	0.0	85.71428571428571
27	28.57142857142857	0.0	57.14285714285714	14.285714285714285
28	33.33333333333333	33.33333333333333	16.666666666666664	16.666666666666664
29	20.0	40.0	0.0	40.0
30	25.0	75.0	0.0	0.0
31	33.33333333333333	0.0	0.0	66.66666666666666
32	0.0	0.0	50.0	50.0
33	0.0	50.0	50.0	0.0
34	0.0	0.0	50.0	50.0
35	0.0	100.0	0.0	0.0
>>END_MODULE
>>Per sequence GC content	warn
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
31	0.0
32	0.0
33	0.0
34	0.5
35	1.0
36	1.0
37	1.0
38	1.0
39	1.0
40	1.5
41	2.0
42	2.0
43	2.0
44	1.5
45	2.0
46	5.5
47	8.0
48	9.5
49	11.0
50	12.5
51	14.0
52	14.5
53	15.0
54	15.0
55	14.5
56	14.0
57	12.5
58	12.0
59	11.5
60	10.0
61	10.5
62	11.0
63	9.0
64	5.0
65	3.0
66	2.5
67	1.5
68	1.0
69	1.0
70	0.5
71	0.0
72	0.0
73	0.0
74	0.0
75	0.0
76	0.0
77	0.0
78	0.0
79	0.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
31	0.0
32	0.0
33	0.0
34	0.0
35	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
15	7.0
16	0.0
17	0.0
18	2.0
19	2.0
20	0.0
21	4.0
22	8.0
23	19.0
24	3.0
25	1.0
26	0.0
27	1.0
28	1.0
29	1.0
30	1.0
31	1.0
32	0.0
33	0.0
34	1.0
35	1.0
>>END_MODULE
>>Sequence Duplication Levels	pass
#Total Deduplicated Percentage	77.35849056603774
#Duplication Level	Percentage of deduplicated	Percentage of total
1	70.73170731707317	54.71698113207547
2	29.268292682926827	45.28301886792453
3	0.0	0.0
4	0.0	0.0
5	0.0	0.0
6	0.0	0.0
7	0.0	0.0
8	0.0	0.0
9	0.0	0.0
>10	0.0	0.0
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
TACGCTCAGACGACGACTGGC	2	3.7735849056603774	No Hit
GTATCTACCCCGCTG	2	3.7735849056603774	No Hit
TGAAACAAGACGGTCGCGGTTCT	2	3.7735849056603774	No Hit
TTGGTTGCAGACTCCCGTTCAAC	2	3.7735849056603774	No Hit
TTGGTTGCAGACTCCCGTTCAA	2	3.7735849056603774	No Hit
TCTGGATCTACCCCGCTG	2	3.7735849056603774	No Hit
TAGAATGGCAGACTTGGCGTGG	2	3.7735849056603774	No Hit
AGGCGTGGTGACGGCATTCGTGA	2	3.7735849056603774	No Hit
TTTAGCAGGTGCACGCGGACATC	2	3.7735849056603774	No Hit
AAGGCATTCGTGGAC	2	3.7735849056603774	No Hit
TATCAAGACGCGGTTGGTCTGGA	2	3.7735849056603774	No Hit
AAGGATGGTCGGCCT	2	3.7735849056603774	No Hit
TTTGGTTGCAGACTCCCGTTCAACCCGGCAGTTC	1	1.8867924528301887	No Hit
TTATCAGACTTGTTACTCC	1	1.8867924528301887	No Hit
CCCGCTCCTACTCGGCAAGAGTG	1	1.8867924528301887	No Hit
TCTGGATCTACCCCGCTGAGATG	1	1.8867924528301887	No Hit
TTTGGTTGCAGACTCCCGTTCAAC	1	1.8867924528301887	No Hit
TACTCGGCAAGAGTGCGCAGCGACTCTACAC	1	1.8867924528301887	No Hit
TTGGTGGACTCAACTCATCGACT	1	1.8867924528301887	No Hit
TATGACAAGGATGGTCGGCCTATGGCTAGG	1	1.8867924528301887	No Hit
TTGAAGGACAGTACGCACCCATG	1	1.8867924528301887	No Hit
TATAAGGCAGCACGCTGGTTAGCC	1	1.8867924528301887	No Hit
GTGGACTCAACTCATCGACTCCGTGGTTAACCATA	1	1.8867924528301887	No Hit
AGATTGAACCTCTTGATTGGCACA	1	1.8867924528301887	No Hit
TTTTCGAAAGACCAACGCCGATG	1	1.8867924528301887	No Hit
TATGCGAACGGTCATCAAGTACG	1	1.8867924528301887	No Hit
TTAGCCCACCGTATGAAACAAGACG	1	1.8867924528301887	No Hit
CCACGCTCAGACGAC	1	1.8867924528301887	No Hit
TGTTCAAGTTCGCTGGAAAAACTACCCGA	1	1.8867924528301887	No Hit
TATGGCTCCAAGGCCCCGAGAG	1	1.8867924528301887	No Hit
TTGAACCTCTTGATTGGCACGAAGTCTC	1	1.8867924528301887	No Hit
ACAAGGATGGTCGGCCTATGG	1	1.8867924528301887	No Hit
TAAACACTCCGATACTAATGGC	1	1.8867924528301887	No Hit
TGAAACAAGACGGTCGCGGTTC	1	1.8867924528301887	No Hit
TACTAATGCCTGACGGACGCAT	1	1.8867924528301887	No Hit
TCAGACTTGTTACTCCTGTCC	1	1.8867924528301887	No Hit
TTTGACGACCGAACCCTCGGAGT	1	1.8867924528301887	No Hit
TGACAAGGATGGTCGGCCTATGG	1	1.8867924528301887	No Hit
TTCGCTGGAAAAACTACCCGGTA	1	1.8867924528301887	No Hit
TTTGGTTGCAGACTCCCGTTCAACCCG	1	1.8867924528301887	No Hit
TTTGGTTGCAGACTCCCGT	1	1.8867924528301887	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10	0.0	0.0	0.0	0.0	0.0
11	0.0	0.0	0.0	0.0	0.0
12	0.0	0.0	0.0	0.0	0.0
13	0.0	0.0	0.0	0.0	0.0
14	0.0	0.0	0.0	0.0	0.0
15	0.0	0.0	0.0	0.0	0.0
16	0.0	0.0	0.0	0.0	0.0
17	0.0	0.0	0.0	0.0	0.0
18	0.0	0.0	0.0	0.0	0.0
19	0.0	0.0	0.0	0.0	0.0
20	0.0	0.0	0.0	0.0	0.0
21	0.0	0.0	0.0	0.0	0.0
22	0.0	0.0	0.0	0.0	0.0
23	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	fail
#Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTACG	5	0.0	17.0	17
TCAAGTA	5	0.0	17.0	15
GTCATCA	5	0.0	17.0	11
TATGCGA	5	0.0	17.0	1
GAACGGT	5	0.0	17.0	6
TGCGAAC	5	0.0	17.0	3
GCGAACG	5	0.0	17.0	4
GGTCATC	5	0.0	17.0	10
ATGCGAA	5	0.0	17.0	2
CATCAAG	5	0.0	17.0	13
CGAACGG	5	0.0	17.0	5
ATCAAGT	5	0.0	17.0	14
AACGGTC	5	0.0	17.0	7
CGGTCAT	5	0.0	17.0	9
TCATCAA	5	0.0	17.0	12
ACGGTCA	5	0.0	17.0	8
CAAGTAC	5	0.0	17.0	16
>>END_MODULE
