##FastQC	0.11.5
>>Basic Statistics	pass
#Measure	Value
Filename	S38_SantoTomePrincipe.sRNAs.15-35nt.Partitivirus_3_segment_2.forward-mapped.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	64
Sequences flagged as poor quality	0
Sequence length	16-35
%GC	50
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	37.0	NaN	NaN	NaN	NaN	NaN
2	36.03125	NaN	NaN	NaN	NaN	NaN
3	36.625	NaN	NaN	NaN	NaN	NaN
4	36.21875	NaN	NaN	NaN	NaN	NaN
5	35.78125	NaN	NaN	NaN	NaN	NaN
6	36.1875	NaN	NaN	NaN	NaN	NaN
7	36.03125	NaN	NaN	NaN	NaN	NaN
8	36.03125	NaN	NaN	NaN	NaN	NaN
9	36.03125	NaN	NaN	NaN	NaN	NaN
10	36.21875	NaN	NaN	NaN	NaN	NaN
11	36.21875	NaN	NaN	NaN	NaN	NaN
12	36.21875	NaN	NaN	NaN	NaN	NaN
13	36.03125	NaN	NaN	NaN	NaN	NaN
14	36.0	NaN	NaN	NaN	NaN	NaN
15	36.0	NaN	NaN	NaN	NaN	NaN
16	36.03125	NaN	NaN	NaN	NaN	NaN
17	36.61904761904762	NaN	NaN	NaN	NaN	NaN
18	36.01587301587302	NaN	NaN	NaN	NaN	NaN
19	35.71186440677966	NaN	NaN	NaN	NaN	NaN
20	36.12280701754386	NaN	NaN	NaN	NaN	NaN
21	36.107142857142854	NaN	NaN	NaN	NaN	NaN
22	36.0	NaN	NaN	NaN	NaN	NaN
23	36.28	NaN	NaN	NaN	NaN	NaN
24	36.02040816326531	NaN	NaN	NaN	NaN	NaN
25	36.4468085106383	NaN	NaN	NaN	NaN	NaN
26	37.0	NaN	NaN	NaN	NaN	NaN
27	36.27777777777778	NaN	NaN	NaN	NaN	NaN
28	36.25	NaN	NaN	NaN	NaN	NaN
29	36.172413793103445	NaN	NaN	NaN	NaN	NaN
30	36.53846153846154	NaN	NaN	NaN	NaN	NaN
31	35.916666666666664	NaN	NaN	NaN	NaN	NaN
32	37.0	NaN	NaN	NaN	NaN	NaN
33	34.333333333333336	NaN	NaN	NaN	NaN	NaN
34	33.75	NaN	NaN	NaN	NaN	NaN
35	34.6	NaN	NaN	NaN	NaN	NaN
>>END_MODULE
>>Per tile sequence quality	pass
#Tile	Base	Mean
2121	1	0.0
2121	2	0.0
2121	3	NaN
2121	4	0.0
2121	5	0.0
2121	6	0.0
2121	7	0.0
2121	8	0.0
2121	9	0.0
2121	10	0.0
2121	11	0.0
2121	12	NaN
2121	13	0.0
2121	14	0.0
2121	15	0.0
2121	16	0.0
2121	17	NaN
2121	18	0.0
2121	19	-5.0
2121	20	NaN
2121	21	-5.0
2121	22	-5.0
2121	23	-5.0
2121	24	-5.0
2121	25	-5.0
2121	26	-4.0
2121	27	-3.0
2121	28	-2.0
2121	29	-2.0
2121	30	-2.0
2121	31	-2.0
2121	32	-2.0
2121	33	-2.0
2121	34	-2.0
2121	35	-1.0
2139	1	0.0
2139	2	0.0
2139	3	NaN
2139	4	0.0
2139	5	0.0
2139	6	0.0
2139	7	0.0
2139	8	0.0
2139	9	0.0
2139	10	0.0
2139	11	0.0
2139	12	NaN
2139	13	0.0
2139	14	0.0
2139	15	0.0
2139	16	0.0
2139	17	NaN
2139	18	0.0
2139	19	1.0
2139	20	NaN
2139	21	1.0
2139	22	1.0
2139	23	1.0
2139	24	1.0
2139	25	1.0
2139	26	2.0
2139	27	3.0
2139	28	4.0
2139	29	4.0
2139	30	4.0
2139	31	4.0
2139	32	4.0
2139	33	4.0
2139	34	4.0
2139	35	5.0
2163	1	0.0
2163	2	0.0
2163	3	NaN
2163	4	0.0
2163	5	0.0
2163	6	0.0
2163	7	0.0
2163	8	0.0
2163	9	0.0
2163	10	0.0
2163	11	0.0
2163	12	NaN
2163	13	0.0
2163	14	0.0
2163	15	0.0
2163	16	0.0
2163	17	NaN
2163	18	0.0
2163	19	1.0
2163	20	NaN
2163	21	1.0
2163	22	1.0
2163	23	1.0
2163	24	1.0
2163	25	1.0
2163	26	2.0
2163	27	-3.0
2163	28	-2.0
2163	29	-2.0
2163	30	-2.0
2163	31	-2.0
2163	32	-2.0
2163	33	-2.0
2163	34	-2.0
2163	35	-1.0
2212	1	0.0
2212	2	0.0
2212	3	NaN
2212	4	0.0
2212	5	0.0
2212	6	0.0
2212	7	0.0
2212	8	0.0
2212	9	0.0
2212	10	0.0
2212	11	0.0
2212	12	NaN
2212	13	0.0
2212	14	0.0
2212	15	0.0
2212	16	0.0
2212	17	NaN
2212	18	0.0
2212	19	1.0
2212	20	NaN
2212	21	1.0
2212	22	1.0
2212	23	1.0
2212	24	1.0
2212	25	1.0
2212	26	2.0
2212	27	3.0
2212	28	-2.0
2212	29	-2.0
2212	30	-2.0
2212	31	-2.0
2212	32	-2.0
2212	33	-2.0
2212	34	-2.0
2212	35	-1.0
2230	1	0.0
2230	2	0.0
2230	3	NaN
2230	4	0.0
2230	5	0.0
2230	6	0.0
2230	7	0.0
2230	8	0.0
2230	9	0.0
2230	10	0.0
2230	11	0.0
2230	12	NaN
2230	13	0.0
2230	14	0.0
2230	15	0.0
2230	16	0.0
2230	17	NaN
2230	18	0.0
2230	19	1.0
2230	20	NaN
2230	21	1.0
2230	22	1.0
2230	23	1.0
2230	24	1.0
2230	25	1.0
2230	26	-4.0
2230	27	-3.0
2230	28	-2.0
2230	29	-2.0
2230	30	-2.0
2230	31	-2.0
2230	32	-2.0
2230	33	-2.0
2230	34	-2.0
2230	35	-1.0
2262	1	0.0
2262	2	0.0
2262	3	NaN
2262	4	0.0
2262	5	0.0
2262	6	0.0
2262	7	0.0
2262	8	0.0
2262	9	0.0
2262	10	0.0
2262	11	0.0
2262	12	NaN
2262	13	0.0
2262	14	0.0
2262	15	0.0
2262	16	0.0
2262	17	NaN
2262	18	0.0
2262	19	1.0
2262	20	NaN
2262	21	1.0
2262	22	1.0
2262	23	1.0
2262	24	1.0
2262	25	1.0
2262	26	2.0
2262	27	3.0
2262	28	4.0
2262	29	4.0
2262	30	4.0
2262	31	4.0
2262	32	4.0
2262	33	4.0
2262	34	4.0
2262	35	-1.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
31	2.0
32	1.0
33	6.0
34	1.0
35	4.0
36	11.0
37	39.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	9.375	46.875	9.375	34.375
2	7.8125	42.1875	10.9375	39.0625
3	21.875	25.0	10.9375	42.1875
4	21.875	29.6875	14.0625	34.375
5	23.4375	48.4375	6.25	21.875
6	12.5	46.875	7.8125	32.8125
7	9.375	32.8125	21.875	35.9375
8	15.625	21.875	35.9375	26.5625
9	18.75	28.125	26.5625	26.5625
10	7.8125	28.125	32.8125	31.25
11	12.5	26.5625	28.125	32.8125
12	9.375	21.875	53.125	15.625
13	9.375	25.0	45.3125	20.3125
14	12.5	31.25	26.5625	29.6875
15	9.375	23.4375	29.6875	37.5
16	6.25	23.4375	28.125	42.1875
17	6.349206349206349	22.22222222222222	38.095238095238095	33.33333333333333
18	14.285714285714285	23.809523809523807	26.984126984126984	34.92063492063492
19	15.254237288135593	16.94915254237288	18.64406779661017	49.152542372881356
20	14.035087719298245	21.052631578947366	14.035087719298245	50.877192982456144
21	23.214285714285715	14.285714285714285	21.428571428571427	41.07142857142857
22	13.461538461538462	32.69230769230769	23.076923076923077	30.76923076923077
23	18.0	26.0	22.0	34.0
24	24.489795918367346	16.3265306122449	16.3265306122449	42.857142857142854
25	29.78723404255319	10.638297872340425	4.25531914893617	55.319148936170215
26	16.27906976744186	23.25581395348837	11.627906976744185	48.837209302325576
27	25.0	25.0	22.22222222222222	27.77777777777778
28	21.875	25.0	18.75	34.375
29	24.137931034482758	17.24137931034483	17.24137931034483	41.37931034482759
30	34.61538461538461	26.923076923076923	7.6923076923076925	30.76923076923077
31	29.166666666666668	12.5	20.833333333333336	37.5
32	20.0	26.666666666666668	26.666666666666668	26.666666666666668
33	33.33333333333333	22.22222222222222	22.22222222222222	22.22222222222222
34	12.5	12.5	25.0	50.0
35	0.0	0.0	20.0	80.0
>>END_MODULE
>>Per sequence GC content	fail
#GC Content	Count
0	0.0
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
31	0.5
32	1.0
33	1.0
34	1.0
35	1.0
36	0.5
37	0.0
38	0.0
39	0.0
40	0.0
41	0.5
42	2.0
43	3.0
44	4.5
45	8.0
46	11.0
47	13.0
48	18.5
49	24.5
50	29.5
51	31.5
52	26.0
53	18.0
54	12.5
55	9.0
56	7.5
57	6.0
58	3.5
59	3.0
60	2.0
61	1.5
62	2.0
63	2.0
64	2.0
65	2.0
66	1.0
67	0.0
68	0.0
69	0.0
70	0.0
71	0.0
72	0.0
73	0.0
74	0.0
75	0.0
76	0.0
77	0.0
78	0.0
79	0.0
80	0.0
81	0.0
82	0.0
83	0.0
84	0.0
85	0.0
86	0.0
87	0.0
88	0.0
89	0.0
90	0.0
91	0.0
92	0.0
93	0.0
94	0.0
95	0.0
96	0.0
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.0
2	0.0
3	0.0
4	0.0
5	0.0
6	0.0
7	0.0
8	0.0
9	0.0
10	0.0
11	0.0
12	0.0
13	0.0
14	0.0
15	0.0
16	0.0
17	0.0
18	0.0
19	0.0
20	0.0
21	0.0
22	0.0
23	0.0
24	0.0
25	0.0
26	0.0
27	0.0
28	0.0
29	0.0
30	0.0
31	0.0
32	0.0
33	0.0
34	0.0
35	0.0
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
16	1.0
17	0.0
18	4.0
19	2.0
20	1.0
21	4.0
22	2.0
23	1.0
24	2.0
25	4.0
26	7.0
27	4.0
28	3.0
29	3.0
30	2.0
31	9.0
32	6.0
33	1.0
34	3.0
35	5.0
>>END_MODULE
>>Sequence Duplication Levels	warn
#Total Deduplicated Percentage	65.625
#Duplication Level	Percentage of deduplicated	Percentage of total
1	64.28571428571429	42.1875
2	26.190476190476193	34.375
3	4.761904761904762	9.375
4	2.380952380952381	6.25
5	2.380952380952381	7.8125
6	0.0	0.0
7	0.0	0.0
8	0.0	0.0
9	0.0	0.0
>10	0.0	0.0
>50	0.0	0.0
>100	0.0	0.0
>500	0.0	0.0
>1k	0.0	0.0
>5k	0.0	0.0
>10k+	0.0	0.0
>>END_MODULE
>>Overrepresented sequences	fail
#Sequence	Count	Percentage	Possible Source
ACAGAACTTCTTTACCCACCGATGCC	5	7.8125	No Hit
AACCCACAGAACTTCTTTACCCACCGATGCC	4	6.25	No Hit
CCCACAGAACTTCTTTACCCACCGATGCC	3	4.6875	No Hit
CACAGAACTTCTTTACCCACCGATGCC	3	4.6875	No Hit
AACCGATCTTGTCGAACC	2	3.125	No Hit
ACCCACAGAACTTCTTTACCCACCGATG	2	3.125	No Hit
TAACCCACAGAACTTCTTTACCCACCGATGCC	2	3.125	No Hit
GCCGGGATGTCTACGACTGATGAAGCCATGG	2	3.125	No Hit
CAGTAACCCACAGAACTTCTTTACCCACCGATGCC	2	3.125	No Hit
AACGCGTGGTCTTATGAGGAT	2	3.125	No Hit
CGGATCCTACAAAACAGC	2	3.125	No Hit
CTCAGAATCTGCAAACTTTGGTGTCGTACACA	2	3.125	No Hit
ACAGAACTTCTTTACCCACCGATGC	2	3.125	No Hit
ACCCACAGAACTTCTTTACCCACCGATGCC	2	3.125	No Hit
CAGAACTTCTTTACCCACCGATGCC	2	3.125	No Hit
GTAACCCACAGAACTTCTTTACCCACCGATGCC	1	1.5625	No Hit
CAGAACTTCTTTACCCACC	1	1.5625	No Hit
GATATCACCCATACGAACACCGATGTATACG	1	1.5625	No Hit
TCGCACGAGACTTCAAGCTC	1	1.5625	No Hit
TAACCCACAGAACTTCTTTACCCACCGATGCA	1	1.5625	No Hit
CCACAGAACTTCTTTACCCACCGATGCC	1	1.5625	No Hit
AATTGCAGCACGTGGTTTCTCTGGAAGTATTGAAC	1	1.5625	No Hit
CAACCGATCTTGTCGAACCCGCT	1	1.5625	No Hit
ACCCACAGAACTTCTTTACCCACCGA	1	1.5625	No Hit
CTTGGTTAATGGCGTAGGAGC	1	1.5625	No Hit
AGTAACCCACAGAACTTCTTTACCCACCGATGCC	1	1.5625	No Hit
AGTAACCCACAGAACTTCTTTACCCACCGATG	1	1.5625	No Hit
CAGTAACCCACAGAACTTCTTTACCCACCGATGC	1	1.5625	No Hit
ATATGTTATGAAGTCGAGGAT	1	1.5625	No Hit
TAGTATCCTGCATCCCTGAACC	1	1.5625	No Hit
ACCAGAGGCTGCACCA	1	1.5625	No Hit
ACGTGGTTTCTCTGGAAGT	1	1.5625	No Hit
CACTATTAGAAACCTCCCGGGCTTGCG	1	1.5625	No Hit
CTGCAATTGCAGCACGTGGTTTCTCTGGAAGTATT	1	1.5625	No Hit
CAGAACTTCTTTACCCACCGATGC	1	1.5625	No Hit
TGTCTGCTGACACTATTAGAAACCTCCCGGGCTT	1	1.5625	No Hit
GTTTATGACTCTGTTCAGCCGGGCGCTCAAT	1	1.5625	No Hit
ACCCACAGAACTTCTTTACCCACCGATGCAT	1	1.5625	No Hit
AACCGATCTTGTCGAACCCGCTGACA	1	1.5625	No Hit
GCGCAACTACAAGGACCGGACC	1	1.5625	No Hit
ACAGAAACCCACAGAACTTCTTTACCAACCGATGC	1	1.5625	No Hit
ACAGAACTTCTTTACCCACCGATG	1	1.5625	No Hit
>>END_MODULE
>>Adapter Content	pass
#Position	Illumina Universal Adapter	Illumina Small RNA 3' Adapter	Illumina Small RNA 5' Adapter	Nextera Transposase Sequence	SOLID Small RNA Adapter
1	0.0	0.0	0.0	0.0	0.0
2	0.0	0.0	0.0	0.0	0.0
3	0.0	0.0	0.0	0.0	0.0
4	0.0	0.0	0.0	0.0	0.0
5	0.0	0.0	0.0	0.0	0.0
6	0.0	0.0	0.0	0.0	0.0
7	0.0	0.0	0.0	0.0	0.0
8	0.0	0.0	0.0	0.0	0.0
9	0.0	0.0	0.0	0.0	0.0
10	0.0	0.0	0.0	0.0	0.0
11	0.0	0.0	0.0	0.0	0.0
12	0.0	0.0	0.0	0.0	0.0
13	0.0	0.0	0.0	0.0	0.0
14	0.0	0.0	0.0	0.0	0.0
15	0.0	0.0	0.0	0.0	0.0
16	0.0	0.0	0.0	0.0	0.0
17	0.0	0.0	0.0	0.0	0.0
18	0.0	0.0	0.0	0.0	0.0
19	0.0	0.0	0.0	0.0	0.0
20	0.0	0.0	0.0	0.0	0.0
21	0.0	0.0	0.0	0.0	0.0
22	0.0	0.0	0.0	0.0	0.0
23	0.0	0.0	0.0	0.0	0.0
>>END_MODULE
>>Kmer Content	fail
#Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTTACC	5	0.0	19.0	9
TTACCCA	5	0.0	19.0	11
CACCGAT	5	0.0	19.0	16
CCCACCG	5	0.0	19.0	14
AGAACTT	5	0.0	19.0	2
ACCGATG	5	0.0	19.0	17
ACTTCTT	5	0.0	19.0	5
AACTTCT	5	0.0	19.0	4
CCACCGA	5	0.0	19.0	15
GAACTTC	5	0.0	19.0	3
TTCTTTA	5	0.0	19.0	7
ACCCACC	5	0.0	19.0	13
TACCCAC	5	0.0	19.0	12
CGATGCC	5	0.0	19.0	19
CAGAACT	5	0.0	19.0	1
TCTTTAC	5	0.0	19.0	8
TTTACCC	5	0.0	19.0	10
CCGATGC	5	0.0	19.0	18
CTTCTTT	5	0.0	19.0	6
>>END_MODULE
