FastQCFastQC Report
Wed 18 May 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2947
Sequences flagged as poor quality0
Sequence length15-35
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGGGTCGTCCGTC41514.082117407533085No Hit
CTGCCCACTGGGGTGTCGCGGCC401.3573125212080082No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCTCC130.44112656939260264No Hit
TGCCCACTGGGGTGTCGCGGCC130.44112656939260264No Hit
GGCAGGACGAACGAGCGATGGCGGTGGGTATCCTC130.44112656939260264No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCT110.3732609433322022No Hit
TTTGGCCGCTCCTCGAGGCGGAGCCCCGCGTCGAC110.3732609433322022No Hit
GCGGCCGCGGTACCCGAGTTGGG100.33932813030200204No Hit
CTCGGCGGCGAGGCG90.3053953172718018No Hit
CGCGCTCGCGCGCTGGGCGCGGACCAGGCGGCGC80.2714625042416016No Hit
CAGGACGAACGAGCGATGGCGGTGGGTATCCT80.2714625042416016No Hit
CGTGCGTGACACCTTCCGGTTGGCCGGCCTGACC80.2714625042416016No Hit
GCGGCCGCGGTACCCGAGT80.2714625042416016No Hit
TTGAGGAGGAGGAGGAGGTCGCGGCGGATCC80.2714625042416016No Hit
CTTCCCCCTCCACCA70.23752969121140144No Hit
CTTCCGTCTGGTCCTCCGAAGCCT70.23752969121140144No Hit
TCTGGACCGAGACCCGAACGG70.23752969121140144No Hit
CTGGCGTGGTCTCTGTGACGGCC70.23752969121140144No Hit
TCGGCGTGCGTGACACCTTCCGGTTGGCCGGC70.23752969121140144No Hit
TTTCCGGTCTCTGTCGCGCC70.23752969121140144No Hit
CACTCGTGCTCAGAGGGGC60.20359687818120123No Hit
CCTGACTGCTGCCACAGACCTCATGCCTACGGACC60.20359687818120123No Hit
CGCGGACCAGGCGGCGC60.20359687818120123No Hit
CCACGACTTGGTAGAACGGGC60.20359687818120123No Hit
TTTTCCGGTCTCTGTCGCGC60.20359687818120123No Hit
CTTCCGTCTGGTCCTCCGAAGCCTCTTCCCTCGCT60.20359687818120123No Hit
GCTCGCGCGCTGGGCGCGGACCAGGCGGCG60.20359687818120123No Hit
TTTTCCGGTCTCTGTCGCGCC60.20359687818120123No Hit
CCGTCCTTGGATCCTTCTCGTCGTCCGCCGCTG60.20359687818120123No Hit
CAGGACGAACGAGCGATGGCGGTGGGTATCCTCC60.20359687818120123No Hit
GCGGCCGCGGTACCCGAGTTGGGCAG50.16966406515100102No Hit
CGCTTCTGGACCGAGACCCGAACGGG50.16966406515100102No Hit
GACACCTTCCGGTTGGCCGGCC50.16966406515100102No Hit
AGCCCCGCGTCGACC50.16966406515100102No Hit
GTGCGTGACACCTTCCGGTTGGCCGGCCT50.16966406515100102No Hit
ACGACGAGCGGAGACA50.16966406515100102No Hit
AGGGCGACACTTCGGGT50.16966406515100102No Hit
CTCGTGATCCGCGGGCC50.16966406515100102No Hit
TGCTGCCACAGACCTCATGCCTACGGACC50.16966406515100102No Hit
CCGCCGACCTGACTGCTGCCACAGACCTCATGCCT50.16966406515100102No Hit
AGGACGAACGAGCGATGGCGGTGGGT50.16966406515100102No Hit
TGACTGCTGCCACAGACCTCATGCCTACGGACC50.16966406515100102No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCTCCG50.16966406515100102No Hit
CGCGGTGCCGGAACAGCTGCTGGACC50.16966406515100102No Hit
CTGGTCCTCCGAAGCCT50.16966406515100102No Hit
TCTCGTCGTCCGCCGCTG50.16966406515100102No Hit
GGACGAACGAGCGATGGCGGTGGGTATCCTC40.1357312521208008No Hit
CTCCTTCCGTCTGGTCCTCCGAAGCCT40.1357312521208008No Hit
CCACGTCGTCAGGAGTCTCCGGGGAAGCG40.1357312521208008No Hit
TTCGGAAGGGGGCCC40.1357312521208008No Hit
ATGGGACTCCTTCCGTCTGGTCCTCCGAAGCC40.1357312521208008No Hit
GCGGACCAGGCGGCGC40.1357312521208008No Hit
CTGGCGTGGTCTCTGTGAC40.1357312521208008No Hit
GGTCGCGGCGGATCCCCC40.1357312521208008No Hit
ACGCCGTCATTCGAAGAGCGCTCGCC40.1357312521208008No Hit
GATAAACCCTCCCCCTGGCC40.1357312521208008No Hit
CTGAACCTCTACAACCTGGCCACC40.1357312521208008No Hit
GTCCTCCGGAGATCTCTCGGGC40.1357312521208008No Hit
TCCGGTCTCTGTCGCGCC40.1357312521208008No Hit
CGATGGCGGATGTGCTGTACT40.1357312521208008No Hit
TTTCTCCGCTGTAATCGACCA40.1357312521208008No Hit
TCCCGGGTGGCCAAGGATCTC40.1357312521208008No Hit
ACGAACGAGCGATGGCGGTGGGTATCCT40.1357312521208008No Hit
GGACGAACGAGCGATGGCGGTGGGTATCCTCC40.1357312521208008No Hit
CCGGTCTCTGTCGCGCC40.1357312521208008No Hit
ATGGGACTCCTTCCGTCTGGTCCTCCGAAGCCT40.1357312521208008No Hit
TTCTGGACCGAGACCCGAACGG40.1357312521208008No Hit
GCGCTCGCGCGCTGGGCGCGGACCAGGCGGC40.1357312521208008No Hit
GAGGCAGGACGAACGAGCGATGGCGGTGGGTA40.1357312521208008No Hit
GTCATGGCTGAACCACGACTTGGTAGAACGGGC40.1357312521208008No Hit
ATCCCACTTCGCGGTGCCGGAACAGCTGCTGGACC40.1357312521208008No Hit
TCGTGATCCGCGGGCC40.1357312521208008No Hit
AGCCCCGCGTCGACCT40.1357312521208008No Hit
CTTCCGTCTGGTCCTCCGAAGCCTCTTCC40.1357312521208008No Hit
CCGCCAACGCCCCGACCCT40.1357312521208008No Hit
TCCCCCCCCCGTGCC40.1357312521208008No Hit
CTGCCCACTGGGGTGTCGCGGC40.1357312521208008No Hit
GGAGCCCCGCGTCGACCT40.1357312521208008No Hit
GGATCCTTCTCGTCGTCCGCCGCTG40.1357312521208008No Hit
GCCCACTGGGGTGTCGCGGCC40.1357312521208008No Hit
CTGAACCACGACTTGGTAGAACGGGCA40.1357312521208008No Hit
ATGACCTGGCCGCAGCCTTCTCGCCCGA40.1357312521208008No Hit
TTCAGGCCCCCTTCGCGGAC40.1357312521208008No Hit
ATGACCTGGCCGCAGCCTTCTCGCCCGAG40.1357312521208008No Hit
CTTGCCACCGCGGACCTCGC40.1357312521208008No Hit
TTGGCCGCTCCTCGAGGCGGAGCCCCGCGTCGAC40.1357312521208008No Hit
CAGGACGAACGAGCGATGGCGGTGGGTATCCTCCG30.10179843909060061No Hit
GCTCGCGCGCTGGGCGCGGACCAGGCGGC30.10179843909060061No Hit
CTTCAGGCCCCCTTCGCGGAC30.10179843909060061No Hit
CAAGGATCTCCTCTGGCAGG30.10179843909060061No Hit
CAAGGATCTCCTCTGGCAGGATCTCACCCTTCC30.10179843909060061No Hit
CGCACTCAAGGTGGACTCCGACCCG30.10179843909060061No Hit
TTCGAGCGTCTGGTCGGGCGGACAGTGGCCC30.10179843909060061No Hit
AAGGTCGGCGTGCGTGACACCTTCCGGTTGGCC30.10179843909060061No Hit
CGGCGTGCGTGACACCTTCCGGTTGGCCGGC30.10179843909060061No Hit
GACACCTTCCGGTTGGCCGGCCTGAC30.10179843909060061No Hit
CTACAACCTTGCCACCGCGGACCTCGC30.10179843909060061No Hit
CTGGGCCCGCTTCTGGACC30.10179843909060061No Hit
AGGAGGAGGAGGAGGTCGCGGCGGATCC30.10179843909060061No Hit
CTCAAGGTGGACTCCGACCCGTGGAGACAGGG30.10179843909060061No Hit
TCTCCGAGGAGCTCGAACGTC30.10179843909060061No Hit
CTTGCGCGAATGGATCTCCACC30.10179843909060061No Hit
GGGTCATGGCTGAACCACGACTTGGTAGAACGGGC30.10179843909060061No Hit
CCGGTGCGCGCGGCCGCGGTACCCGAGTTGGG30.10179843909060061No Hit
CAAGGATCTCCTCTGGCAGGATCTCACCC30.10179843909060061No Hit
CTTCCGTCTGGTCCTCCGAAGCC30.10179843909060061No Hit
CGTCACGGCTCCGCCTGCCCACTGGGGTGTCGCGG30.10179843909060061No Hit
CCTGGTATACGGAGGGCC30.10179843909060061No Hit
CATGGCTGAACCACGACTTGGTAGAACGGGCAGTT30.10179843909060061No Hit
CGAACGTCTTCGGAAGGGGGCCC30.10179843909060061No Hit
CTTGCCACCGCGGACCTCGCC30.10179843909060061No Hit
CTGAACCACGACTTGGTAGAACGGGC30.10179843909060061No Hit
CCTCTGGCGTGGTCTCTGTGACGGCCT30.10179843909060061No Hit
CGCACTCAAGGTGGACTCCGACCCGTGGAGACA30.10179843909060061No Hit
CGCGCTCGCGCGCTGGGCGCGGACCAGGCGGCG30.10179843909060061No Hit
CGCGCTCGCGCGCTGGGCGCGGACCAGGCGGC30.10179843909060061No Hit
TTCTCGTCGTCCGCCGCTGTGGC30.10179843909060061No Hit
CCGCTCCTCGAGGCGGAGCCCCGCGTCGACC30.10179843909060061No Hit
ACACCTTCCGGTTGGCCGGCC30.10179843909060061No Hit
GCGGCCGCGGTACCCGAGTT30.10179843909060061No Hit
TCCCCGTGAGACACCTCCTCCCC30.10179843909060061No Hit
TCAAGGTCGGCGTGCGTGACA30.10179843909060061No Hit
CTGGAAATATTGAGGAGGAGG30.10179843909060061No Hit
CTTGGTAGAACGGGC30.10179843909060061No Hit
GGTCTCCGAGGAGCTCGAACGTC30.10179843909060061No Hit
CTGACTGCTGCCACAGACCTCATGCCTACGGACC30.10179843909060061No Hit
ATCGGCTTCCGGTGCGCGCGGCCGCGGTACCC30.10179843909060061No Hit
CCGCGGACCTCGCCTGTGTCG30.10179843909060061No Hit
TTGCCCCCGGCGATGGCGGACGTGCTGTACTCTGC30.10179843909060061No Hit
CCTCGCTCGTGATCCGCG30.10179843909060061No Hit
CCCTGAGGGATTCGTCGGCGTGCAGGCGATCGA30.10179843909060061No Hit
TCCCACTTCGCGGTGCCGGAACAGCTGCTGGACC30.10179843909060061No Hit
TGACCTGGCCGCAGCCTTCTCGCCC30.10179843909060061No Hit
CAGCGGAAGGCGCTCTGGGA30.10179843909060061No Hit
TCGGGCGGACAGTGGCCCCCCTCGGCACGC30.10179843909060061No Hit
GCGCTCGCGCGCTGGGCGCGGACCAGGCGGCG30.10179843909060061No Hit
TGCTGCCACAGACCTCATGCCTACGGACCT30.10179843909060061No Hit
GACAGCGGAAGGCGCTCTGGGATTTGGCGC30.10179843909060061No Hit
CGGCTCCGCCTGCCCACTGGGGT30.10179843909060061No Hit
CGGCCCTCTGGCGTGGTCTCTGTGACGGCCT30.10179843909060061No Hit
AGGTCGGCGTGCGTGACACCTTCCGGTTGGCC30.10179843909060061No Hit
ACACCTTCCGGTTGGCCGGCCTGAC30.10179843909060061No Hit
GCAGGACGAACGAGCGATGGCGGTGGGTATCCT30.10179843909060061No Hit
AAACCCTCCCCCTGGCC30.10179843909060061No Hit
TCCGGTGCGCGCGGCCGCGGTACCCGAGTTGGGCA30.10179843909060061No Hit
CTTTTCCGGTCTCTGTCGCGCCGTACTGAGC30.10179843909060061No Hit
CGTGATCCGCGGGCCC30.10179843909060061No Hit
GTAGATCGGAGTCAGGCGGC30.10179843909060061No Hit
TCGTGATCCGCGGGCCC30.10179843909060061No Hit
GAGCCCCGCGTCGACCT30.10179843909060061No Hit
TCCCCGTGAGACACCTCCTC30.10179843909060061No Hit
CGCACGTGGAGGTCGTAGGA30.10179843909060061No Hit
CCGTCCGACGAAGGGCTGCCC30.10179843909060061No Hit
CATGGCTGAACCACGACTTGGTAGGACGGGC30.10179843909060061No Hit
TTCCGTCTGGTCCTCCGAAGCCTC30.10179843909060061No Hit
CGCCCCGACCCTCGCTCGTGATCCGCGG30.10179843909060061No Hit
GCGGTCCCGATGGAGGAGGCTA30.10179843909060061No Hit
GAGGAGGAGGAGGAGGTCGCGGCGGATC30.10179843909060061No Hit
AGGACGAACGAGCGATGGCGGTGGGTATCCTC30.10179843909060061No Hit
CGTCCGCCGCTGTGGC30.10179843909060061No Hit
AACGGGGGTCCCTGCCCGCTGGGCGCGTCCACTC30.10179843909060061No Hit
CTTCTGGACCGAGACCCGAACGGGGACC30.10179843909060061No Hit
TTCCGTCTGGTCCTCCGAAGCCT30.10179843909060061No Hit
CGCTTGCGTCGCGGTTC30.10179843909060061No Hit
GAAGGCGCTCTGGGATTTGGC30.10179843909060061No Hit
GTCTGGTCGGGCGGACAGT30.10179843909060061No Hit
CCGGAATGCTGAAGTGGGGGG30.10179843909060061No Hit
CTTCCGTCTGGTCCTCCGAAGCCTC30.10179843909060061No Hit
ACCACGACTTGGTAGAACGGGC30.10179843909060061No Hit
TGGGGGTCGTCCGTC30.10179843909060061No Hit
CTCCGGAGATCTCTCGGGCTTTCGAGACC30.10179843909060061No Hit
CTGGGCGGCGCCGGGTTCCCTCACCCGAAAGGG30.10179843909060061No Hit
CTGGGCCCGCTTCTGGACCGAGACCCGAAC30.10179843909060061No Hit
CGCTTGCGCGAATGGATCTCCA30.10179843909060061No Hit
CTTCGCGGTGCCGGAACAGCTGCTGGACCA30.10179843909060061No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCCGG50.01069.029
GCCGCTG100.008937129118.7777827
TCGTCCG500.00121432921.3828
GGGTCGT357.9328325E-518.4310344
CGGGGGT357.9328325E-518.4310341
GGGGGTC357.9328325E-518.4310342
GGGGTCG357.9328325E-518.4310343
GGTCGTC357.9328325E-518.4310345
GTCCGTC402.2144523E-416.1271559
CGTCCGT402.2144523E-416.1271558
GTCGTCC500.00121432912.9017246