FastQCFastQC Report
Wed 18 May 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Narnavirus.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences311
Sequences flagged as poor quality0
Sequence length15-34
%GC64

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGAGAAGGATCCAAGGACGGA216.752411575562702No Hit
ACGAGAAGGATCCAAGGACGG113.536977491961415No Hit
CGAGAGATCTCCGGAGGACGG103.215434083601286No Hit
CCTCCTCCTCCTCCT92.8938906752411575No Hit
CTTCCTCCTCCTCCTC61.929260450160772No Hit
TCCTCCTCCTCCTCCT61.929260450160772No Hit
CAGGATCCTCGATCGCCT41.2861736334405145No Hit
TCCTCGATCGCCTGCACGCCG41.2861736334405145No Hit
TTCCTCCTCCTCCTC41.2861736334405145No Hit
CATCCTCCTCCTCCT30.964630225080386No Hit
ACTTCAGCATTCCGGC30.964630225080386No Hit
GGAGATCGCGGCACTC30.964630225080386No Hit
AAGACGTTCGAGCTCCTCGGA30.964630225080386No Hit
TCCCCGGAGACTCCTGACGAC30.964630225080386No Hit
CCTCCTCCTCCTCCTC30.964630225080386No Hit
CTCTCCTCCTCCTCCTC30.964630225080386No Hit
CCGAGAGATCTCCGGAGGACGGACGAC30.964630225080386No Hit
TACATGACCCCACCGGCG30.964630225080386No Hit
TCCTCCTCCTCCTCCTC30.964630225080386No Hit
TCGGGATCCTCGTCGACG30.964630225080386No Hit
CTACGTGCGTGCCGA30.964630225080386No Hit
CGAGAAGGATCCAAGGA30.964630225080386No Hit
TTCCCCGGAGACTCCTGACGA30.964630225080386No Hit
CACGAGACACCTCCCCCAGCT30.964630225080386No Hit
TACTCCTCCTCCTCCT20.6430868167202572No Hit
ATCCAGCTCAGGACGCGCCA20.6430868167202572No Hit
TCGGGATCCTCGTCGACGGTAAATTCGCCCCGGT20.6430868167202572No Hit
TAAACCGTCTCGGAGTGAAGA20.6430868167202572No Hit
CTCCTCCTCCTCCTC20.6430868167202572No Hit
TGCGCCGCCTGGTCCG20.6430868167202572No Hit
GGTCTCGGAAGGGCGGGTAGC20.6430868167202572No Hit
TGTAAGGGCCCGCGGATC20.6430868167202572No Hit
AATAAGGTCCGTAGGCATGAG20.6430868167202572No Hit
GCAGCCCTTCGTCGGA20.6430868167202572No Hit
CCCGAAAGGTCGACGCGGGGC20.6430868167202572No Hit
CGTTCGAGCTCCTCGGA20.6430868167202572No Hit
TTTCCTTGTCTCCGCTCGTCGTGCC20.6430868167202572No Hit
TCCCCGGAGACTCCTGACGA20.6430868167202572No Hit
AAGGTCCGTAGGCATGAGGTC20.6430868167202572No Hit
TTCGGGTCTCGGTCCAGAAGCC20.6430868167202572No Hit
GACGAGAAGGATCCAAGGACG20.6430868167202572No Hit
CGTCTCGGAGTGAAGA20.6430868167202572No Hit
TAACTCCCCCGTCGACACAGG20.6430868167202572No Hit
TTGTCTCCGCTCGTCGTGCCCC20.6430868167202572No Hit
AGAGGCTTCGGAGGACCAGACGGAAGG20.6430868167202572No Hit
AGCACGAGTGGTCAGAGGGCC20.6430868167202572No Hit
CGATCTACGGGCGGCC20.6430868167202572No Hit
GGAGATCGCGGCACTCGG20.6430868167202572No Hit
CGACGAGAAGGATCCAAGGACGG20.6430868167202572No Hit
AAGCTCTCCTACGACCT20.6430868167202572No Hit
CCTTCCGGATAGCGTCGGCCGCGAC20.6430868167202572No Hit
TCTCTCCTCCTCCTCCT10.3215434083601286No Hit
ATATTCGGAGTAGGACTTGACCAGACGC10.3215434083601286No Hit
TCGCCGGGGGCAGGACCG10.3215434083601286No Hit
TGGTAAACCGTCTCGGAGTGA10.3215434083601286No Hit
TAATAAGGTCCGTAGGCATGA10.3215434083601286No Hit
CGAGCGGCTGGTCTCGAAAGCCCGAGAGATC10.3215434083601286No Hit
TCCAAGGACGGACGCCCGAGT10.3215434083601286No Hit
TCACCCCCATCCCCCCCAC10.3215434083601286No Hit
GTAATAAGGTCCGTAGGCATG10.3215434083601286No Hit
GGAGATCGCGGCACTCGGCC10.3215434083601286No Hit
CCGAGAGATCTCCGGAGGACG10.3215434083601286No Hit
TCCGCCATCGCCGGGGG10.3215434083601286No Hit
CATCGAAGGGACGGATTCTCCGGGGGTC10.3215434083601286No Hit
TCAGGGGGATCCGCC10.3215434083601286No Hit
TACGACCTCCACGTGCGTGCCT10.3215434083601286No Hit
GGGTCAAGGGGCGCT10.3215434083601286No Hit
TACCCTCCCGAAACTCCCCAT10.3215434083601286No Hit
CATCATCGAAGGGACGGATTCTCCGGGGGTCCC10.3215434083601286No Hit
AGGAGGTGTCTCACGGGGAT10.3215434083601286No Hit
CCTGCTCTGGCGGAGGCACCG10.3215434083601286No Hit
GAGATCGCGGCACTCG10.3215434083601286No Hit
CCTTGTCTCCGCTCGTCG10.3215434083601286No Hit
GGCGCTTCCCCGGAGACTCCTGACGACGTGGTCA10.3215434083601286No Hit
ATGGTGGAGGGGGAA10.3215434083601286No Hit
AACTTGTCCGCGAAGGGGGC10.3215434083601286No Hit
AGGACGGACGACCCC10.3215434083601286No Hit
CACGGGTCTCGGAAGGGC10.3215434083601286No Hit
GCCACAGCGGCGGACG10.3215434083601286No Hit
TCTGACGGGCACGGGG10.3215434083601286No Hit
AAGGGACGGATTCTCCGGGGG10.3215434083601286No Hit
CCCCCAGCTCCTTGCCCC10.3215434083601286No Hit
GGGGCCCTCCGTATACCAGGT10.3215434083601286No Hit
CCCCTCCTCCTCCTC10.3215434083601286No Hit
AAGAGGCTTCGGAGGACC10.3215434083601286No Hit
ATCCCCCCCACGTGCCC10.3215434083601286No Hit
GATCCGGTACTGTCGGA10.3215434083601286No Hit
AGTGGACGCGCCCAGCGGGCA10.3215434083601286No Hit
TCTCCTCCTCCTCCT10.3215434083601286No Hit
CGCGTAAGCGGGCAGCCCTTCGTCGGA10.3215434083601286No Hit
CGACGAGAAGGATCCAAGGAC10.3215434083601286No Hit
GAGAAGGATCCAAGGACGGAC10.3215434083601286No Hit
CGGAGACTCCTGACGACA10.3215434083601286No Hit
AGCACGAGTGGTCAGAGG10.3215434083601286No Hit
ACTCCCCATCACCCCCATCCCCT10.3215434083601286No Hit
CGGCAATATTCGGAGTAGGACTTGACCAGACG10.3215434083601286No Hit
ATCCCTCAGGGGGATCCGCCGCGACC10.3215434083601286No Hit
AGTGGACGCGCCCAGCGGGCAG10.3215434083601286No Hit
CGCGAAGTGGGACCC10.3215434083601286No Hit
TCGCTCTGGGTCGTCGCCC10.3215434083601286No Hit
GGCGCAACGTCTCATTCCTCC10.3215434083601286No Hit
CTCCGGAGGACGGACGACCCC10.3215434083601286No Hit
TCATCCAGCTCAGGACGCGCC10.3215434083601286No Hit
ACAGGCGAGGTCCGCGGTGGC10.3215434083601286No Hit
TCCGCTCGTCGTGCCC10.3215434083601286No Hit
TCTCTTGTTCTTGCCGCGCCT10.3215434083601286No Hit
TCGGCCGCGACACCCCAG10.3215434083601286No Hit
TCTCCACGGGTCGGAGTCCAC10.3215434083601286No Hit
GAGAAGGATCCAAGGACGGA10.3215434083601286No Hit
CACGCTCAGTACGGC10.3215434083601286No Hit
TTCTTGCCGCGCCTCTGACGG10.3215434083601286No Hit
CTTCCCGCGGAGGCGAGG10.3215434083601286No Hit
TCGGGATCCTCGTCGAC10.3215434083601286No Hit
CCCAGGATCCTCGATCGCCTG10.3215434083601286No Hit
CGAGACACCTCCCCCAGCTCCTTGCCCCCTGGG10.3215434083601286No Hit
GTCTCGGAAGGGCGGGTAGCT10.3215434083601286No Hit
TCGTCCGCCATCGCCGGGGGC10.3215434083601286No Hit
CCTTGTCTCCGCTCGTCGTGCC10.3215434083601286No Hit
CCGCTCGTCGTGCCCCTCGGG10.3215434083601286No Hit
GGAGGAGGAGCGGCC10.3215434083601286No Hit
TACTCGCCGGAGATCGCGGCACTCGG10.3215434083601286No Hit
GTTTCCGTTGTCCGC10.3215434083601286No Hit
GAGAAGGATCCAAGGAC10.3215434083601286No Hit
CGGCGGACGACGAGAAGGATCCAAGGA10.3215434083601286No Hit
CAGGCCCACCGTGCGGGAGA10.3215434083601286No Hit
TGAACCGTCTCGGAGTGAAGA10.3215434083601286No Hit
ATCGGGATCCTCGTCGAC10.3215434083601286No Hit
AAGGGCCCGCGGATCACGAGC10.3215434083601286No Hit
CGGAGTGGACGCGCCCAGCG10.3215434083601286No Hit
AACTCCCCCGTCGACACAGGC10.3215434083601286No Hit
CATCCTCCTCCTCCTC10.3215434083601286No Hit
TCTCTCCTCCTCCTCC10.3215434083601286No Hit
ATGAGGTCTGTGGCGGCAGTC10.3215434083601286No Hit
TGGCCTCTTCCCGCGGAGGCGAGGGC10.3215434083601286No Hit
CATGGAACCTCGCAGC10.3215434083601286No Hit
ACAGCCCCTCTGAGCACGAGT10.3215434083601286No Hit
AGTGGGCAGGCGGAGC10.3215434083601286No Hit
CGAGAAGGATCCAAGGACGG10.3215434083601286No Hit
AACCGTCTCGGAGTGAAGAGC10.3215434083601286No Hit
CCCGGAGACTCCTGACGACATG10.3215434083601286No Hit
CTTCCTCCTCCTCCT10.3215434083601286No Hit
AGAGGGGATCGGCCGCCT10.3215434083601286No Hit
CGGGACAGCCTCGGAGCC10.3215434083601286No Hit
CGGAGCCCTGCTCTGGCGGAG10.3215434083601286No Hit
CGAGAAGGATCCAAGGACGGAC10.3215434083601286No Hit
TCGGTCCAGAAGCGGGC10.3215434083601286No Hit
GCCACAGCGGCGGACGACGAGAAGGATC10.3215434083601286No Hit
TCCGAAGACGTTCGAGCTCCT10.3215434083601286No Hit
AGCACGGGTCTCGGAAGGGC10.3215434083601286No Hit
ACCTCCTCCTCCTCCTC10.3215434083601286No Hit
TGGTCATGGAACCTCGCAGCGG10.3215434083601286No Hit
CGCGGCAATATTCGGAGTAGGACTTGACCA10.3215434083601286No Hit
CGCGGTGATCAGCCACTCGTACCGGGC10.3215434083601286No Hit
AGGATACCCACCGCCATC10.3215434083601286No Hit
CACGGGTCTCGGAAGGG10.3215434083601286No Hit
CTCCAAGCGAGGGAAGAGGCTTCGGA10.3215434083601286No Hit
GCACATCCGCCATCGCCGGGG10.3215434083601286No Hit
CACGTGCCCCAGGATCCTCGA10.3215434083601286No Hit
GTGGACGCGCCCAGCGGGCA10.3215434083601286No Hit
CTTTCGGGTGAGGGAACCCGGCGCCGCC10.3215434083601286No Hit
GAGGGTCGGGGCGTTGGCG10.3215434083601286No Hit
CGACGAGAAGGATCCAAGGACA10.3215434083601286No Hit
CCAACTCGGGTACCGCGGCCGCGCGCACCGGA10.3215434083601286No Hit
TACGGGCGGCCGAGGAGTACC10.3215434083601286No Hit
ATCGGCCGCCTGACTCCGATCT10.3215434083601286No Hit
CGGGAAGGGGGAGATCCTGCC10.3215434083601286No Hit
GCCATCCCCGCGGAC10.3215434083601286No Hit
TTCGGAGGACCAGACGGAAGG10.3215434083601286No Hit
ACCCCCATCCCCCCCACGTGC10.3215434083601286No Hit
AGGACTTGACCAGACGCAACG10.3215434083601286No Hit
CCTCTGAGCACGAGTGGTCAG10.3215434083601286No Hit
CGCCTTATTGCCCAACTC10.3215434083601286No Hit
ACCCACCGCCATCGCTCGTTCGTCCTGC10.3215434083601286No Hit
CTCGAGAAGCTCCGAGCGCGC10.3215434083601286No Hit
GTCTGTCGGAACCGCGA10.3215434083601286No Hit
TCCTTGTCTCCGCTCGTCGTG10.3215434083601286No Hit
GGCCAGGTCATCCCCGCGGAC10.3215434083601286No Hit
CAGGGCCCGCGGATCACGA10.3215434083601286No Hit
TCGGGCGAGAAGGCTGCGGCC10.3215434083601286No Hit
CTGACTCCGATCTACGGGCGGCCGAGG10.3215434083601286No Hit
TCCTGCCAGAGGAGATCCT10.3215434083601286No Hit
TCCCCCCCACGTGCCCCAGGA10.3215434083601286No Hit
AACTCGGGTACCGCGGCCGCGCGCACCGGAAG10.3215434083601286No Hit
ACCAGGTTCCCTACCCTCCC10.3215434083601286No Hit
CAGCCCTTCGTCGGACGGACC10.3215434083601286No Hit
TTGTCCTGGTCATGCCCT10.3215434083601286No Hit
CGGGAAGGGTGAGATCCTGCC10.3215434083601286No Hit
CGCAGCGGATCCGGCGACGTC10.3215434083601286No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)