FastQCFastQC Report
Wed 18 May 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Ourmiavirus.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Ourmiavirus.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences209
Sequences flagged as poor quality0
Sequence length15-35
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAAACTGTCGGCCGGGAAGAC62.8708133971291865No Hit
TTTGAGCAGCGAGAAGGAGAGG41.9138755980861244No Hit
TCACTTGTGGACCTTTCGGACC41.9138755980861244No Hit
GTCCGGTGGTCGTCC31.4354066985645932No Hit
TTGCTTCCCTCTTCTTTGCCTC31.4354066985645932No Hit
TCATACCCTCCTCTATGCACACC31.4354066985645932No Hit
TAAAACGGATCTTCCAGGTGGGGT31.4354066985645932No Hit
TGAGTACCCCCCAGCCGGCTGT31.4354066985645932No Hit
TAGCGTCGATGCTTCGGGTTT31.4354066985645932No Hit
GACGAGGTGGCTGAG31.4354066985645932No Hit
TCAGTGTGACTGCCAAGGAGCT31.4354066985645932No Hit
TCGTTCGCGGACTTGC31.4354066985645932No Hit
TTTCTCCCTGAACTCGACTTACT31.4354066985645932No Hit
TGAGGCGTTCGCTGGCTTTGAGCA20.9569377990430622No Hit
AGGTCTGGGCATCAGTGTGACTGC20.9569377990430622No Hit
TCGAGTGTGCCGAGAAAGGAAG20.9569377990430622No Hit
TTCTACTCGAACCTCCCCTCT20.9569377990430622No Hit
TTTGCTTCCCTCTTCTTTGCCTCCA20.9569377990430622No Hit
TGTTGTCGACTACTCCGAGCACT20.9569377990430622No Hit
TGAAACTGTCGGCCGGGAAG20.9569377990430622No Hit
TCTACTCGAACCTCCCCTCTGA20.9569377990430622No Hit
TTCGCGGACTTGCTGGGACGTGCT20.9569377990430622No Hit
TGTTGTCGACTACTCCGAGCACTA20.9569377990430622No Hit
TCGGCCGGGAAGACGTTTGTTAT20.9569377990430622No Hit
TTGTCGACTACTCCGAGCACT20.9569377990430622No Hit
TGCGCTCGAGGATGACCCTGATTT20.9569377990430622No Hit
TTTCGGACCATGAGTGCTTTGATAAG20.9569377990430622No Hit
TTTCCGGGGACTACGAGTCTG20.9569377990430622No Hit
TCTGTCGTCCTCGCCCCCCTTC20.9569377990430622No Hit
TCTGAAAGCCGCGTCCCCTCC20.9569377990430622No Hit
TGTCTTTGCAGCTTCGCGG20.9569377990430622No Hit
TGAATGTTTCCACGTGTTGCAAGGTCGGCGTCGT20.9569377990430622No Hit
TTTCCGGGGACTACGAGTCTGCA20.9569377990430622No Hit
TACTCGAACCTCCCCTCTGAAAGCCG20.9569377990430622No Hit
TGCTACTTGGCCGGCGGCC20.9569377990430622No Hit
CACCGAAGGTTTTTCTCCCTGAACTCGA10.4784688995215311No Hit
TGAGAGGGACGGCAAGGCTCGC10.4784688995215311No Hit
AAATTCGATGCACGCAAAGGAGT10.4784688995215311No Hit
TCGTGGAGAGGCAACCCCTGAGG10.4784688995215311No Hit
CTCCAAAACTACCTCGCCTTCTGCTACT10.4784688995215311No Hit
TATCGTCTTCCGGTGCTCCCG10.4784688995215311No Hit
TAGATGCGTGCTCCACGGCGAGG10.4784688995215311No Hit
CAAGAAAGTCGCGACCGGTGAC10.4784688995215311No Hit
TTGAGCCACTGAATGTTTCCACGT10.4784688995215311No Hit
CTTTCGGACCATGAGTGCT10.4784688995215311No Hit
TCACGTGCCTATCTGAGATTCG10.4784688995215311No Hit
TGTCGTTCGCGGACTTGCTGGGA10.4784688995215311No Hit
TACCCCCCAGCCGGCTGTCTCACGT10.4784688995215311No Hit
TACCCTCCTCTATGCACACCTGTC10.4784688995215311No Hit
TGCCGAGTCTGTCGTCCTCG10.4784688995215311No Hit
TGTTTCCGGGGACTACGAGTCTGAAA10.4784688995215311No Hit
CCCCCCAGCCGGCTGTCTCAC10.4784688995215311No Hit
TTCGGACCATGAGTGCTTTGATAAGCGAG10.4784688995215311No Hit
TGAGAGGGACGGCAAGGCTCG10.4784688995215311No Hit
TGAATTGATCACTTGTGGACCC10.4784688995215311No Hit
TCCAAGAAAGTCGCGACCGGT10.4784688995215311No Hit
TCGAACCTCCCCTCTGAAAGCCGCGA10.4784688995215311No Hit
CCCTGCCGAGTCTGTCGTCCT10.4784688995215311No Hit
TGTGCCCGTGGTGAGAGCGAGA10.4784688995215311No Hit
TCGATCAAGCAGTTCTGTGGCGG10.4784688995215311No Hit
TCGCAAGGTCGGCGTCGTTGAGAG10.4784688995215311No Hit
TAGATGCGTGCTCCACGGCGA10.4784688995215311No Hit
TTGTGTCGTTCGCGGACTTGC10.4784688995215311No Hit
TGCTTCGGGTTTCCTTGCTTCGA10.4784688995215311No Hit
CCTCCAAAACTACCTCGCCTTCTGCTACT10.4784688995215311No Hit
TTTCCACGTGTCGCAAGGTCGGC10.4784688995215311No Hit
TCTGAAAGCCGCGTCCCC10.4784688995215311No Hit
TTGTCGACTACTCCGAGCACTTCTGCGTGTT10.4784688995215311No Hit
TCTGGGCATCAGTGTGACTGCC10.4784688995215311No Hit
GTTGTCGACTACTCCGAGCACTTCT10.4784688995215311No Hit
CTGGCTTTGAGCAGCGAGAAGGAGAGGTTT10.4784688995215311No Hit
TCACTTGTGGACCTTTCGGACCA10.4784688995215311No Hit
TTTCGCGCGAGGAACGGGGGCG10.4784688995215311No Hit
TGGCGGTCCGATGCGCTCGAGGATGACCCTGATTT10.4784688995215311No Hit
TCGCCCCCCTTCATACCCTC10.4784688995215311No Hit
TCACTTGTGGACCTTTCGGACCG10.4784688995215311No Hit
TCCAAGAAAGTCGCGACCGG10.4784688995215311No Hit
TTTGTTTCCGGGGACTACGAGTC10.4784688995215311No Hit
TTCCACAACGACGTAGCGTC10.4784688995215311No Hit
TACCTCGCCTTCTGCTACTTGGC10.4784688995215311No Hit
TTGAGGGTCGGAGAGA10.4784688995215311No Hit
TCGTCTTCCGGTGCTCCCGGGC10.4784688995215311No Hit
TAACTACATCACCTGCCGAGTCTG10.4784688995215311No Hit
TTCCGGCGGTGGACAGATTTTCAAT10.4784688995215311No Hit
TAACTACATCCCCTGCCGAGTCTG10.4784688995215311No Hit
CATACCCTCCTCTATGCACACC10.4784688995215311No Hit
TTTCCACGTGTCGCAAGGTCGGCGT10.4784688995215311No Hit
TCCAAGAAAGTCGCGACCGGTG10.4784688995215311No Hit
TTCGCGCGAGGAACGGGGG10.4784688995215311No Hit
TCGAACCTCCCCTCTGAAAGCC10.4784688995215311No Hit
TCGTCCTCGCCCCCCTTCATACC10.4784688995215311No Hit
TCATGTAACAGCGCCGGGC10.4784688995215311No Hit
AGGGACGGCAAGGCTCGCAGGGTAACT10.4784688995215311No Hit
TCACTTGTGGACCTTTCGGAC10.4784688995215311No Hit
TGCGCTCGAGGATGACCCTGA10.4784688995215311No Hit
CCGGGGACTACGAGTCTGCAAGTGACA10.4784688995215311No Hit
TTCGCGGACTTGCTGGGACG10.4784688995215311No Hit
CTGAGGCGTTCGCTGGCT10.4784688995215311No Hit
TCGGAGAGATGCGCGTGCGA10.4784688995215311No Hit
TCTGAAAGCCGCGTCCCCT10.4784688995215311No Hit
TTGTGTCGTTCGCGGACTTGCTG10.4784688995215311No Hit
TTGATGCTTCGGGTTTCCTTGC10.4784688995215311No Hit
TGAGTACCCCCCAGCCGGCTGA10.4784688995215311No Hit
TTCTGTGGCGGACTGC10.4784688995215311No Hit
GTTGTCGACTACTCCGAGCA10.4784688995215311No Hit
TTGCAGCTTCGCGGTGGATCCCGT10.4784688995215311No Hit
GAAGGAGGGGGCCTG10.4784688995215311No Hit
TTTCCACGTGTCGCAAGGTCGG10.4784688995215311No Hit
TTGTGGCGGTCCGATGCGCTCGA10.4784688995215311No Hit
CCCCTGCCGAGTCTGTCGTCCT10.4784688995215311No Hit
TAAGCCACCCTTGGGCCCCTGCC10.4784688995215311No Hit
TCATGTAACAGCGCCGGGCGT10.4784688995215311No Hit
TCGCAAGGTCGGCGTCGTTGAG10.4784688995215311No Hit
TTCTGCTACTTGGCCGGCGGC10.4784688995215311No Hit
TTGCGGGCTCATTGTTCTCTTTT10.4784688995215311No Hit
TTCGATGCACGCAAAGGAGTG10.4784688995215311No Hit
TCAAGCAGTTCTGTGGCGGAC10.4784688995215311No Hit
TCTGCGTGTTCGAGTGTGCCGAGC10.4784688995215311No Hit
TCTGGGCATCAGTGTGACTGC10.4784688995215311No Hit
TAAAACGGATCTTCCAGGTGGGG10.4784688995215311No Hit
TGATATCGTCTTCCGGTGCTCCC10.4784688995215311No Hit
TACTTCCACAACGACGTAGCGTC10.4784688995215311No Hit
TCTGAAAGCCGCGTCCCCTCCA10.4784688995215311No Hit
TTTCCGGGGACTACGAGTCTGCAAGT10.4784688995215311No Hit
TGCGCTCGAGGATGACCCTGAAC10.4784688995215311No Hit
TGAGTACCCCCCAGCCGGCTG10.4784688995215311No Hit
TTGCGGGCTCATTGTTCTCTTCA10.4784688995215311No Hit
TTGCGGGCTCATTGTTCTCTTTTCGG10.4784688995215311No Hit
TCTACTCGAACCTCCCCTCTGAC10.4784688995215311No Hit
TGTGTCGTTCGCGGACTTGCTGC10.4784688995215311No Hit
TAACAGCGGCGGGCGTGTTGAGGG10.4784688995215311No Hit
TCACCGAAGGTTTTTCTCCCTGAACTCGACT10.4784688995215311No Hit
TTGTGTCGTTCGCGGACTTGCT10.4784688995215311No Hit
GATATCGTCTTCCGGTGCTCCC10.4784688995215311No Hit
TCGGAAAACGCTCGGGAACCA10.4784688995215311No Hit
TACTCGAACCTCCCCTCTGAAAGC10.4784688995215311No Hit
TGCGGTGGTCGTCCG10.4784688995215311No Hit
TCGACTTACTTTCGCGCGAGGT10.4784688995215311No Hit
TCTGAAAGCCGCGTCCCCTC10.4784688995215311No Hit
TCCAAAACTACCTCGCCTTCTGC10.4784688995215311No Hit
TACAAAGGAAAATAAAACGGATCA10.4784688995215311No Hit
TAAAGGGTGTGCCCGTGGTGAGAG10.4784688995215311No Hit
TGGCGGACTGCTGGAACGATC10.4784688995215311No Hit
TGCCGAGTCTGTCGTCCTCGCCC10.4784688995215311No Hit
TCGGACCATGAGTGCTTTGATAAGCGAGTTGTC10.4784688995215311No Hit
TCGATCAAGCAGTTCTGTGGCGGACT10.4784688995215311No Hit
TATCTGAGATTCGTACAAAGGA10.4784688995215311No Hit
CAATTGCGGGCTCATTGTTCTCTTTTCGGAAAACG10.4784688995215311No Hit
TCTGAAAGCCGCGTCCC10.4784688995215311No Hit
TCGTGGAGAGGCAACCCCTGAGGC10.4784688995215311No Hit
TCCAAGAAAGTCGCGACCGGTGCG10.4784688995215311No Hit
TTGAGGGGTGTCTTTGCAGCT10.4784688995215311No Hit
TGAAAGCCGCGTCCCCTCCAAGAAAG10.4784688995215311No Hit
TATCGTCTTCCGGTGCTCCCGG10.4784688995215311No Hit
TGTGGCGGTCCGATGCGCTCGAGGATGACCCTGA10.4784688995215311No Hit
TCCAAGAAAGTCGCGACCGGTGC10.4784688995215311No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers