FastQCFastQC Report
Wed 18 May 2022
S38_SantoTomePrincipe.sRNAs.15-35nt.Sobemovirus_segment_1.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS38_SantoTomePrincipe.sRNAs.15-35nt.Sobemovirus_segment_1.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences343
Sequences flagged as poor quality0
Sequence length15-33
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACAGAGAACCGTCCGACAAC154.373177842565598No Hit
CTCCTGGATCCGACACTGCTG144.081632653061225No Hit
CTCCGGTAGACCATGCAGCCT102.9154518950437316No Hit
TAAACTCAACCTCGGCTGACC92.623906705539359No Hit
TCATGAGCATGCCTGACGCCT82.3323615160349855No Hit
TTAGAGCTCACCCCACCGCCT61.749271137026239No Hit
CTACTCGCCTCCCTTTCTTCA51.4577259475218658No Hit
AGCCAAGACATGGTCCGGACC41.1661807580174928No Hit
ATGCCTGACGCCTACTCGCCT41.1661807580174928No Hit
CAACGGCTCCGGACTCACGCC41.1661807580174928No Hit
CGATCACTACCCGCTCCATGC30.8746355685131195No Hit
ACCATATCCGTTGCGACCTCGT30.8746355685131195No Hit
TCTCCTGGATCCGACACTGCT30.8746355685131195No Hit
ATCTCCTGGATCCGACACTGC30.8746355685131195No Hit
ATCCGTTGCGACCTCGACCCG30.8746355685131195No Hit
CAGAGAACCGTCCGACAACAT30.8746355685131195No Hit
AATCACTACCCGCTCCATGCC30.8746355685131195No Hit
ATACAGAGAACCGTCCGACAA30.8746355685131195No Hit
CAATCACTACCCGCT30.8746355685131195No Hit
AGAGAACCGTCCGACAACAT20.5830903790087464No Hit
AGAGAACCGTCCGACAACA20.5830903790087464No Hit
CCCAGGGGACTGGTCTTGCCT20.5830903790087464No Hit
CAACTCCATGCCGGCTCCCCG20.5830903790087464No Hit
AACTCCATGCCGGCTC20.5830903790087464No Hit
CAGGGCGCCCTCCGAACGCGA20.5830903790087464No Hit
TACCTGTAGGCATGGCGC20.5830903790087464No Hit
AGAACAATCTCCACATCCGCC20.5830903790087464No Hit
CGCATTGATGGGAGGCGGCTT20.5830903790087464No Hit
TCCGTTGCGACCTCGACCCGT20.5830903790087464No Hit
ACAGAGAACCGTCCGACAACA20.5830903790087464No Hit
AACTTCTCCGGTAGACCATGC20.5830903790087464No Hit
ACAGAGAACCGTCCGACAAC20.5830903790087464No Hit
CACAACTCCATGCCGGCTCCC20.5830903790087464No Hit
TGGCGTGCTGCGTAGCTCTCC20.5830903790087464No Hit
ATGACCATATCCGTTGCGACC20.5830903790087464No Hit
CCCAGATGCCGGACGACC20.5830903790087464No Hit
TCGGACGCCATCATCTCC20.5830903790087464No Hit
TTCAACCCTCTCACTAGCGCC20.5830903790087464No Hit
CCAGGGGACTGGTCTTGCCT20.5830903790087464No Hit
CACATTCGCGTCCGACCGATC20.5830903790087464No Hit
CCAACATCAAACCAGTACCTG20.5830903790087464No Hit
CGGCTCCGGACTCACGCC20.5830903790087464No Hit
AACTCAACCTCGGCTGAC20.5830903790087464No Hit
CCATTTCACTATCGTTCGGGA20.5830903790087464No Hit
AGACATGGTCCGGACCA20.5830903790087464No Hit
GCACACATTCGCGTCCGACCG20.5830903790087464No Hit
TTCGCGTCCGACCGATCAGCC20.5830903790087464No Hit
GGATCCGACACTGCTGCTTCC20.5830903790087464No Hit
GTTAGAGCTCACCCCACCGCC20.5830903790087464No Hit
ACCGCTTTCAACCCTCTCACT20.5830903790087464No Hit
CCACTCAACCTCGGC20.5830903790087464No Hit
TTCCTGGATCCGACACTGCTG20.5830903790087464No Hit
CCATTGGTAGAGATTGTGCACCC20.5830903790087464No Hit
AGAGAACCGTCCGACAACATC20.5830903790087464No Hit
CGGCTTCTCCCTCTGATAAGG20.5830903790087464No Hit
AGCCAAGACATGGTCCGGACCA20.5830903790087464No Hit
CGGTAGACCATGCAGCCTGGC20.5830903790087464No Hit
CTCCGAAGCTTCAGGTCTGGT20.5830903790087464No Hit
TTCCGCGCCTCGGACGCCATC20.5830903790087464No Hit
CTTCTCCCTCTGATAAGGCACC10.2915451895043732No Hit
CCCACAGTCGGCTTCTCCCTC10.2915451895043732No Hit
AGAACAATCTCCACATCCGC10.2915451895043732No Hit
CACATCCGCCCAGAGTCTGTC10.2915451895043732No Hit
TTTCGACCTCCTCTTCTTGAG10.2915451895043732No Hit
CGCTCCATGCCGGTG10.2915451895043732No Hit
TCCTGGATCCGACACTGC10.2915451895043732No Hit
ATCAGGGCGCCCTCCGAACGC10.2915451895043732No Hit
CAAGACATGGTCCGGACCA10.2915451895043732No Hit
CAACGGGGTTAGAGCTCACCC10.2915451895043732No Hit
GAACTCCTCCGCCCGATCACC10.2915451895043732No Hit
GACCCTGTCATCATACG10.2915451895043732No Hit
TACAACATCCCCGTGGTCCCT10.2915451895043732No Hit
CCATTCGTCTTGCCCCCC10.2915451895043732No Hit
ACGGACTCTAGGGTAACG10.2915451895043732No Hit
ATAAAGGCCTGCGGA10.2915451895043732No Hit
CTTCTCCGGTAGACCATGCACC10.2915451895043732No Hit
GCCAAGACATGGTCCGGACCA10.2915451895043732No Hit
AAACCAGTACCTGTAGGCATG10.2915451895043732No Hit
CAACGGCTCCGGACTCACGCCC10.2915451895043732No Hit
CACCAGCAGACTGTCCAGTTC10.2915451895043732No Hit
CTACCGCTTTCAACCCTCTCA10.2915451895043732No Hit
AACGCCTCCACTCTCC10.2915451895043732No Hit
AAGCGGCTCCGGACTCA10.2915451895043732No Hit
CCGCCATTCGTCTTGCCCCC10.2915451895043732No Hit
ACTACCGCTTTCAACCCTCTC10.2915451895043732No Hit
ATTCGTCTTGCCCCCCCGCTG10.2915451895043732No Hit
CCTCCCTTTCTTCATCGCAT10.2915451895043732No Hit
ATACAGAGAACCGTCCGACAAC10.2915451895043732No Hit
TCGTCTTGAGCGAATGAGGCT10.2915451895043732No Hit
CATGCCTGACGCCTACTCGCCC10.2915451895043732No Hit
AAACAGAGCCGGGTCATCATA10.2915451895043732No Hit
ACTGATCAAAGCCCACCCCGT10.2915451895043732No Hit
ACTGAGGGTCTGGTCCG10.2915451895043732No Hit
AGCGAACTCCTGACAATGTCC10.2915451895043732No Hit
TTCCGCGCCTCGGACGCC10.2915451895043732No Hit
AAAACAATCTCCACATCCGCC10.2915451895043732No Hit
AGGTGCCGTCCAATCCC10.2915451895043732No Hit
GCGCACACATTCGCGTCCGAC10.2915451895043732No Hit
CACGCCCATCCGCATGCAAGC10.2915451895043732No Hit
CGAACTCCTGACAATGTCCAT10.2915451895043732No Hit
AGCGTAGAAATGGTCCGAGA10.2915451895043732No Hit
ACCGATCAGCCAAGAC10.2915451895043732No Hit
TGAGCGAACTCCTGACAA10.2915451895043732No Hit
ACCGGGGTTAGAGCTCACCC10.2915451895043732No Hit
GATCACTACCCGCTCC10.2915451895043732No Hit
CCAAGACATGGTCCGGACCA10.2915451895043732No Hit
CCGGTAGACCATGCAGCC10.2915451895043732No Hit
GATCACTACCCGCTCCATGCCC10.2915451895043732No Hit
CTGAGGGTCATGAGCATGCC10.2915451895043732No Hit
TCCGGACTCACGCCCATCCGC10.2915451895043732No Hit
TCCGGTAGACCATGCAGCCTG10.2915451895043732No Hit
CATCAACCCATCCGTCCCGCTT10.2915451895043732No Hit
TGCCCCATCTTCGTTGCGAT10.2915451895043732No Hit
TGAGCATGCCTGACGCCT10.2915451895043732No Hit
CAACGATCCCCATAGAAGCATAAAACTCTACTG10.2915451895043732No Hit
AGTACCTGTAGGCAT10.2915451895043732No Hit
GGTAGACCATGCAGCCTGGC10.2915451895043732No Hit
ATAAGGCAAACCAGGGGAC10.2915451895043732No Hit
AATGGCTCCGGACTCACGCCC10.2915451895043732No Hit
ATGTCTAGGGTGAATCAGGGTG10.2915451895043732No Hit
GACATGGTCCGGACC10.2915451895043732No Hit
TTGCGACCTCGACCCG10.2915451895043732No Hit
ACCACTCCCCCACAGTCGGCT10.2915451895043732No Hit
TCCATTTCACTATCGTTCGGG10.2915451895043732No Hit
TCAAGAACAATCTCCACATCC10.2915451895043732No Hit
CCAGATGCCGGACGACCG10.2915451895043732No Hit
TCCGACAACATCACCACCACT10.2915451895043732No Hit
CACTATCGTTCGGGACAAGGG10.2915451895043732No Hit
TCTCCGGTAGACCATGCAGCC10.2915451895043732No Hit
GTCCGGACCAATGAGGTAATC10.2915451895043732No Hit
CCATTCGTCTTGCCCCC10.2915451895043732No Hit
CGCTCCGCCAACCCCGCCAGC10.2915451895043732No Hit
CCGCCATTCGTCTTGCCCCCC10.2915451895043732No Hit
CCCCCGATGACCACGAAAACCCCGTCT10.2915451895043732No Hit
AGACATGGTCCGGACC10.2915451895043732No Hit
GTGGTCCGAGAGAATGAGCTC10.2915451895043732No Hit
GGCTTGGATCCTCTGAGG10.2915451895043732No Hit
TAGAACGGATACGGCCTTAGCA10.2915451895043732No Hit
TGAGACTTATCGCCTGCTG10.2915451895043732No Hit
TTCGCGTCCGACCGATCAGCCT10.2915451895043732No Hit
CTAGAGCACCGACCTTGGCCT10.2915451895043732No Hit
GCCAAGACATGGTCCGGAC10.2915451895043732No Hit
AAGGGCTCCAAAGAAAC10.2915451895043732No Hit
CTCCGGTAGACCATGCAGCCTT10.2915451895043732No Hit
CATCTTCGTTGCGATAGTTCC10.2915451895043732No Hit
TGGTAGAGATTGTGCACACA10.2915451895043732No Hit
CGGACTCACGCCCATCCGC10.2915451895043732No Hit
CAAAAACTCCTCCGCC10.2915451895043732No Hit
TTCCGCGCCTCGGACG10.2915451895043732No Hit
CTCCCGTTCTTCCGCGCCTCG10.2915451895043732No Hit
GCGAACTCCTGACAATGTCC10.2915451895043732No Hit
CCATATCCGTTGCGACCTCG10.2915451895043732No Hit
TCATACAACATCCCCGTGGTC10.2915451895043732No Hit
TCCGGTAGACCATGCAGCCT10.2915451895043732No Hit
CGACATACGCGTCCCACCCAC10.2915451895043732No Hit
ATACAACATACCCGTGGTCCC10.2915451895043732No Hit
CATGAGCATGCCTGACGCCT10.2915451895043732No Hit
AACTCCATGCCGGCTCCC10.2915451895043732No Hit
ACTCAACCTCGGCTGACCCGG10.2915451895043732No Hit
AAACTTCTCCGGTAGACCATG10.2915451895043732No Hit
CCAAGACATGGTCCGGACC10.2915451895043732No Hit
TTGGGACAAGGGCGC10.2915451895043732No Hit
GACATGGTCCGGACCAATGA10.2915451895043732No Hit
CGATACAGAGAACCGTCCGAC10.2915451895043732No Hit
CCACGTACTGAGGGTC10.2915451895043732No Hit
AAGAAAACTTTGGATTCTCCT10.2915451895043732No Hit
AATCCGGCTCCCGTTCTTCCG10.2915451895043732No Hit
ACATGGTCCGGACCA10.2915451895043732No Hit
AGACCACACTCGATCTCTTTGTCGTTCTG10.2915451895043732No Hit
AAACTTTGGATTCTCCTTC10.2915451895043732No Hit
CTCTAGAGCACCGACCTTGGC10.2915451895043732No Hit
TTCGTCTTGCCCCCC10.2915451895043732No Hit
ATAAAACTCTACTGTCTGGAC10.2915451895043732No Hit
CTCACCAGATCAATGTTCACCAAT10.2915451895043732No Hit
TATAAGGGCTCCAAAG10.2915451895043732No Hit
TTAAGACTTATCGCCTGC10.2915451895043732No Hit
CGGCTCCGGACTCACGC10.2915451895043732No Hit
GCATGCCTGACGCCTACTCGC10.2915451895043732No Hit
TCCAGTTCGCAGGCCGGTTCT10.2915451895043732No Hit
AGACATGGTCCGGAC10.2915451895043732No Hit
TTCTTCCGCGCCTCGGACG10.2915451895043732No Hit
CCATTCGTCTTGCCCCCCCGC10.2915451895043732No Hit
ATGGTCCGAGAGAATGAGCTC10.2915451895043732No Hit
CGACACTGCTGCTTCCGAGTCCA10.2915451895043732No Hit
ACAATCTCCACATCCGCCCAG10.2915451895043732No Hit
GAGTGAACTCAACCTCGGCT10.2915451895043732No Hit
CAGAAAGTCATCAGGTAGAGT10.2915451895043732No Hit
GTGCCGTCCAATCCCAGGC10.2915451895043732No Hit
CGTTTCGACCTCCTCTTC10.2915451895043732No Hit
CCGGTTCTATTTCTCCTGGGT10.2915451895043732No Hit
GAGACTTATCGCCTGCTGGCT10.2915451895043732No Hit
CCCGCCATTCGTCTTGCCCCCT10.2915451895043732No Hit
CTGAGGGTCATGAGCATGCCT10.2915451895043732No Hit
CATCATCTCCTGGATCCGACA10.2915451895043732No Hit
GGAAGCGGCTCCGGACT10.2915451895043732No Hit
TGGTCCGGACCAATGAGGTAAT10.2915451895043732No Hit
AACTCCATGCCGGCTCCCC10.2915451895043732No Hit
CAACTCCATGCCGGCTCCCC10.2915451895043732No Hit
CCGACACTGCTGCTTCCGAG10.2915451895043732No Hit
GCGTATGCACCAGCAGACTGT10.2915451895043732No Hit
ACAAGGGCGCCCTCCGAACGC10.2915451895043732No Hit
AAACAACGGGGTTAGAGCTC10.2915451895043732No Hit
CGCAGGCCGGTTCTATTTCTC10.2915451895043732No Hit
CTGGATCCGACACTGCTGCTT10.2915451895043732No Hit
TAGGGTAACGGGCATCAG10.2915451895043732No Hit
CAGTACCTGTAGGCATG10.2915451895043732No Hit
ATCAGCCAAGACATGGTCCGG10.2915451895043732No Hit
ATATGCCAGGCCACCTGCAC10.2915451895043732No Hit
AATCTCCACATCCGCCCA10.2915451895043732No Hit
TGCCCCCATCTTCGTTGCGAT10.2915451895043732No Hit
TGAGCATGCCTGACGC10.2915451895043732No Hit
AGCTTCAGGTCTGGTCCGGTT10.2915451895043732No Hit
GGCGAACTCCTGACAATGTCC10.2915451895043732No Hit
TGAGACTTATCGCCTGC10.2915451895043732No Hit
AGCGTAGAAATGGTCCGAGAG10.2915451895043732No Hit
ATCCGGCTCCCGTTCTTCCGC10.2915451895043732No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)