FastQCFastQC Report
Thu 12 Nov 2020
S33.3452.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS33.3452.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences850
Sequences flagged as poor quality0
Sequence length24-30
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGGCTCGGTACTGACTCGACAAGCGCC12414.588235294117647No Hit
TTGGGCTCGGTACTGACTCGACAAGCGCCT394.588235294117647No Hit
TTAACGACCCGCTCTGTTCCATATCGATA344.0No Hit
TTTGTTAACTGGCCGACTTCCCCCGCCT303.5294117647058822No Hit
TATTGTCGAATAACCCACCTCTTGG283.294117647058824No Hit
TAACGACCCGCTCTGTTCCATATCGATAT252.941176470588235No Hit
TCGGTACTGACTCGACAAGCGCCTCGTAC192.235294117647059No Hit
TTAACGACCCGCTCTGTTCCATATCGATAT172.0No Hit
TATACGTCGTGTACGACGCGAGACCGCGGA172.0No Hit
TGGGCTCGGTACTGACTCGACAAGCGCCT172.0No Hit
TTAGATGGACCCGGTATAGGATTTTCGCTC161.8823529411764703No Hit
TAAAAGGACCGATTCGGGCAGTGAGTGTC161.8823529411764703No Hit
TAACACAAGCCCGATCGCTCCGATACATG141.647058823529412No Hit
TGAATTGCCGTGGCTCGGAAGTTGGGCTC141.647058823529412No Hit
TGAGAAAAAGTCACCGTCGTCCTCATGAC131.5294117647058825No Hit
TGGGCTCGGTACTGACTCGACAAGCGCC131.5294117647058825No Hit
TCGGTACTGACTCGACAAGCGCCTCGTACT121.411764705882353No Hit
TTCTTGTTCGGAAAAGTCGCTGGCTTCGT101.1764705882352942No Hit
AAAAGTCACCGTCGTCCTCATGACTGCCT101.1764705882352942No Hit
TACAATTTCTGCATCGTTATAGCACTGAT80.9411764705882352No Hit
TACTGACTCGACAAGCGCCTCGTACTTGT70.823529411764706No Hit
TCATCTTCTTGTTCGGAAAAGTCGCTGGCT70.823529411764706No Hit
TATTGTCGAATAACCCACCTCTTGGTG70.823529411764706No Hit
TACTTGGATTTGTGGGATGATGGCATCGC60.7058823529411765No Hit
TCAAAACTCCCTCTTCGAACGTAACACAAG60.7058823529411765No Hit
TAACGACCCGCTCTGTTCCATATCGATA60.7058823529411765No Hit
TGCCGAAGCCATAAAAGGACCGATTCGGGC50.5882352941176471No Hit
TAGATGGACCCGGTATAGGATTTTCGCTC50.5882352941176471No Hit
TATTGTCGAATAACCCACCTCTTGGT50.5882352941176471No Hit
CACGACGCATTTTCGTAGTTCTCCCCAAGC50.5882352941176471No Hit
TTAGATGGACCCGGTATAGGATTTTCGCT40.4705882352941176No Hit
TTCCAACGTCTCGTTCCATCGGATC40.4705882352941176No Hit
TAGACGTTAACGGCGCTGAGGGGTGTTG40.4705882352941176No Hit
CGCGAGACCGCGGAGGCACTCTTTGAAGG40.4705882352941176No Hit
TATTCACTGGCTTCCGCTTCAAAACTCCT40.4705882352941176No Hit
TTGGGCTCGGTACTGACTCGACAAGCGCCC40.4705882352941176No Hit
TCACTGGCTTCCGCTTCAAAACTCCTCTC40.4705882352941176No Hit
TCCCAAACTTCGACTCGGACCAGTGCCGG40.4705882352941176No Hit
TAGGGAATTTTTGAATGGCTGCTATTTT40.4705882352941176No Hit
TATTTTTTTTGGGCGGATTCTTTCGGGG40.4705882352941176No Hit
TGAATTGCCGTGGCTCGGAAGTTGGGCTCT40.4705882352941176No Hit
TTTGTTAACTGGCCGACTTCCCCCGCCTGA30.35294117647058826No Hit
TCTTTTGTTAACTGGCCGACTTCCCCCGCC30.35294117647058826No Hit
TTGAATTGCCGTGGCTCGGAAGTTGGGCTC30.35294117647058826No Hit
TCGAGAAATTGGGACACTGTAATATTGGGT30.35294117647058826No Hit
TTTACGGTAGTAGCCTAGTAATCCGAGAAA30.35294117647058826No Hit
TGAGGACCAGGGGCTGTGTGAGGGCCTAA30.35294117647058826No Hit
TTGGGGATCCCGTAAGAAATACACGTCGTG30.35294117647058826No Hit
TACTGACTCGACAAGCGCCTCGTACT30.35294117647058826No Hit
TAACGACCCGCTCTGTTCCATATCGATATT30.35294117647058826No Hit
TTTGTCCGGAGGCATCTATTTTTTTGGGA30.35294117647058826No Hit
TCTTTTGTTAACTGGCCGACTTCCCCCGC30.35294117647058826No Hit
TAACAGGAGTACGGCCCACAGTAGCGTC30.35294117647058826No Hit
TTGTTAACTGGCCGACTTCCCCCGCCT30.35294117647058826No Hit
TTCTACTTGGATTTGTGGGATGATGGCATC30.35294117647058826No Hit
TCGGAAAAGTCGCTGGCTTCGTATTCACT30.35294117647058826No Hit
TCGGTAGTTAATTCGAAGGGTTTCGAGAA30.35294117647058826No Hit
TGATGGCAGGAGATTGAACGTTTGTTTCG30.35294117647058826No Hit
TACTGGAAGTGCGGAGAACTTTAGTCCCA30.35294117647058826No Hit
TGCAATATAGACGTTAACGGCGCTGAGGG20.2352941176470588No Hit
TCGATTAACGAACTCCACACTTCTTTGGG20.2352941176470588No Hit
TGCACAGACGCGGTGTTTAGTCTCTGAAA20.2352941176470588No Hit
TTTGTTAACTGGCCGACTTCCCCCGCC20.2352941176470588No Hit
GGATGAAGACGCAGCGGCATGTTGAACTG20.2352941176470588No Hit
TTGGGCGGATTCTTTCGGGGGTGACAATA20.2352941176470588No Hit
TTTGTTGTAACATTTTTTGTATTTGATTGT20.2352941176470588No Hit
TGAGAAAAAGTCACCGTCGTCCTCATGA20.2352941176470588No Hit
TCACTGGCTTCCGCTTCAAAACTCCTCT20.2352941176470588No Hit
TCGATATTGTCGAATAACCCACCTCTTGG20.2352941176470588No Hit
TTAGAGTTTCAAATGCTGTTGGTTCTGCT20.2352941176470588No Hit
TTAACGACCCGCTCTGTTCCATATCGATAA20.2352941176470588No Hit
TCTTGCTTTCGACGCGCTAGAGTGGCTGC20.2352941176470588No Hit
TTCGGTGTCCACACGAGAAACAGAAACGC20.2352941176470588No Hit
TCACCGTCGTCCTCATGACTGCCTCCTGC20.2352941176470588No Hit
TAAAAGGACCGATTCGGGCAGTGAGTGTCT20.2352941176470588No Hit
TCGTGGATGACGTGGACGTGGTCGTTGTG20.2352941176470588No Hit
TGCCTCCTGCCACCAATCCTTCTTGTTTT20.2352941176470588No Hit
TTGTTCGGAAAAGTCGCTGGCTTCGTATT20.2352941176470588No Hit
TGCCACGACGCATTTTCGTAGTTCTCCCC20.2352941176470588No Hit
TTGGTATGATCACCTCTGAGTATGGGGCT20.2352941176470588No Hit
CTTGTTCGGAAAAGTCGCTGGCTTCGTATT20.2352941176470588No Hit
TGGCTTCCGCTTCAAAACTCCTCTCGAT20.2352941176470588No Hit
TATAGACGTTAACGGCGCTGAGGGGTGTT20.2352941176470588No Hit
TCACACACACTACTGATACTATCGGTCTCA20.2352941176470588No Hit
TTTTGTTAACTGGCCGACTTCCCCCGCCT20.2352941176470588No Hit
TCATGACTGCCTCCTGCCACCAATCCTTC20.2352941176470588No Hit
TTAGATGGACCCGGTATAGGATTTTCGGTC20.2352941176470588No Hit
TATTAATGAGACCGCGGAGGACTATCTC20.2352941176470588No Hit
TTCGACTGTTAGGTGGGCAAAATTTGGGA20.2352941176470588No Hit
TTCAAATGCTGTTGGTTCTGCTTGCGGCTC20.2352941176470588No Hit
TTCTAACAAACTGACGGACACAAACCCTG20.2352941176470588No Hit
TTAACGACCCGCTCTGTTCCATATCGAT20.2352941176470588No Hit
TGCGGCTCATTCCAAAGAAGAATTCTTTT20.2352941176470588No Hit
TCCTCATGACTGCCTCCTGCCACCAATCC20.2352941176470588No Hit
TATCGCCTATTGTTTTTTCGTTTAGTTTC20.2352941176470588No Hit
TTACGGTAGTAGCCTAGTAATCCGAGAAAT20.2352941176470588No Hit
TCTTGCTTTCGACGCGCTAGAGTGGCTG20.2352941176470588No Hit
TCGGATCCTATTGCATATGCGGATGCATC20.2352941176470588No Hit
TCGTACTTGTCGATTAACGAACTCCACACT20.2352941176470588No Hit
TTATTAATGAGACCGCGGAGGACTATCTC20.2352941176470588No Hit
TTAATTCGAAGGGTTTCGAGAAATTGGGAC20.2352941176470588No Hit
TCCCTCTTCGAACGTAACACAAGCCCGATC20.2352941176470588No Hit
TAACACAAGCCCGATCGCTCCGATACATGG20.2352941176470588No Hit
TCCTTCTGACGAATTCGAATCTGCGTTTC10.1176470588235294No Hit
TTTTGAATGGCTGCTATTTTTTTTGGGC10.1176470588235294No Hit
CCCGCTCTGTTCCATATCGATATTGTCGA10.1176470588235294No Hit
TTCTTGTTCGGAAAAGTCGCTGGCTTCGA10.1176470588235294No Hit
TGGGGATCCCGTAAGAAATACACGTCGTGT10.1176470588235294No Hit
TTCACTGGCTTCCGCTTCAAAACTCCTCT10.1176470588235294No Hit
ACCGCGGAGGCACTCTTTGAAGCAGT10.1176470588235294No Hit
TCGATTAACGAACTCCACACTTCTTTGG10.1176470588235294No Hit
TGATGTTGGGAAGGGGATACCTATCGCCT10.1176470588235294No Hit
TTGGGCTCGGTACTGACTCGACAAGCGC10.1176470588235294No Hit
TCCTTGTTTTGGAACATTAGATGGACCCGG10.1176470588235294No Hit
TATTGTCGAATAACCCACCTCTTG10.1176470588235294No Hit
TTTACTCTAACAATTGTTTGATCTCCACCC10.1176470588235294No Hit
TCGTACTTGTCGATTAACGAACTCCACA10.1176470588235294No Hit
AGTTTTTAGAGTTTCAAATGCTGTTGGTT10.1176470588235294No Hit
TTGGATCGGAAATATTCATGGGGACGTT10.1176470588235294No Hit
TGAATTGCCGTGGCTCGGAAGTTGGGC10.1176470588235294No Hit
TTCCGCTTCAAAACTCCTCTCGATTTG10.1176470588235294No Hit
TGTCTTTTGTTAACTGGCCGACTTCCCCC10.1176470588235294No Hit
TATGTTTTTGTGTAAATGGGGTTGTTAT10.1176470588235294No Hit
TTCGAAGGGTTTCGAGAAATTGGGACACT10.1176470588235294No Hit
TTCCAACGTCTCGTTCCATCGGATCAC10.1176470588235294No Hit
TCGGAAAAGTCGCTGGCTTCGTATTCAC10.1176470588235294No Hit
CACCCAAAGAGATGAGGACCAGGGGCTGTT10.1176470588235294No Hit
TTAACTGGCCGACTTCCCCCGCCTGAAAGT10.1176470588235294No Hit
TCTTTTTGTGAATTCGACTGTTAGGTGGG10.1176470588235294No Hit
TGACTGCCTCCTGCCACCAATCCTTCTTGT10.1176470588235294No Hit
TTGGGACACTGTAATATTGGGTCATTTGAG10.1176470588235294No Hit
GGGCTCGGTACTGACTCGACAAGCGCCT10.1176470588235294No Hit
TTCTACTTGGATTTGTGGGATGATGG10.1176470588235294No Hit
TTCGAATCTGCGTTTCTTCTTCGTCGCTT10.1176470588235294No Hit
TTAGATGGACCCGGTATAGGATTTTCGC10.1176470588235294No Hit
TGAGTGTCTTTTGTTAACTGGCCGACTTCC10.1176470588235294No Hit
TTTTTTTGGGCGGATTCTTTCGGGGGT10.1176470588235294No Hit
TTCGAGAAATTGGGACACTGTAATATTGG10.1176470588235294No Hit
GGGGATCCCGTAAGAAATACACGTCGTGT10.1176470588235294No Hit
AGCCATAAAAGGACCGATTCGGGCAGTGA10.1176470588235294No Hit
TAACGACCCGCTCTGTTCCATATCGA10.1176470588235294No Hit
TTCTTGTTCGGAAAAGTCGCTGGCTTCG10.1176470588235294No Hit
TCCGACTAGGCCAAAGTTGCAGTAAAAATG10.1176470588235294No Hit
TAAGGCCTTGTTGTAGACCTCTGTCGCAC10.1176470588235294No Hit
TCGGTACTGACTCGACAAGCGCCTCGTA10.1176470588235294No Hit
TTAGACAGAATAATAACAGGAGTACGGCC10.1176470588235294No Hit
TTCCGCTTCAAAACTCCTCTCGATTTGCGC10.1176470588235294No Hit
TCCGATACATGGATTGAACTTCCTGAG10.1176470588235294No Hit
GAGGACCAGGGGCTGTGTGAGGGCATA10.1176470588235294No Hit
TAGATGGACCCGGTATAGGATTTTCGCT10.1176470588235294No Hit
TCTTCTTGTTCGGAAAAGTCGCTGGCTTC10.1176470588235294No Hit
TTCATCTTCTTGTTCGGAAAAGTCGCTGG10.1176470588235294No Hit
TTCTAACAAACTGACGGACACAAACCCT10.1176470588235294No Hit
TCTTGGATCGGAAATATTCATGGGGACGTT10.1176470588235294No Hit
TCATCTGTGTTTGTGTTCGTGGAATAGGG10.1176470588235294No Hit
TATGCGCCGGATGAAGACGCAGCGGCATG10.1176470588235294No Hit
TGCGTCATTTCTTTTGTCCGGAGGCATCT10.1176470588235294No Hit
TTGAATTGCCGTGGCTCGGAAGTTGGGCT10.1176470588235294No Hit
CATGAGTTGAATTGCCGTGGCTCGGAA10.1176470588235294No Hit
TCGAGAAATTGGGACACTGTAATATTGGG10.1176470588235294No Hit
TTTGTGAATTCGACTGTTAGGTGGGCAAA10.1176470588235294No Hit
ATACGTCGTGTACGACGCGAGACCGCGGA10.1176470588235294No Hit
AATTTCCAACGTCTCGTTCCATCGGATC10.1176470588235294No Hit
TGCAGTCGTGGATGACGTGGACGTGGTC10.1176470588235294No Hit
TACGGTAGTAGCCTAGTAATCCGAGAAA10.1176470588235294No Hit
TCGTAATGTCCATTTTCAGTGTTGAAGGC10.1176470588235294No Hit
TATAGACGTTAACGGCGCTGAGGGGTGT10.1176470588235294No Hit
TCGTACAACTCTGCCATAGACACGTCCATT10.1176470588235294No Hit
TCCCTCTTCGAACGTAACACAAGCCCGAT10.1176470588235294No Hit
TTGGGCTCGGTACTGACTCGACAATCGCCT10.1176470588235294No Hit
TTTGTACAATTTCTGCATCGTTATAGCACT10.1176470588235294No Hit
CGTCGTCCTCATGACTGCCTCCTGCCACC10.1176470588235294No Hit
TAACTGGCCGACTTCCCCCGCCTGAAAGT10.1176470588235294No Hit
TTGGATCGGAAATATTCATGGGGACGTTT10.1176470588235294No Hit
TTGTTCGGAAAAGTCGCTGGCTTCGT10.1176470588235294No Hit
AACGACCCGCTCTGTTCCATATCGATAT10.1176470588235294No Hit
TGAGGACCAGGGGCTGTGTGAGGGCCTAAT10.1176470588235294No Hit
GATGAGGACCAGGGGCTGTGTGAGGGCC10.1176470588235294No Hit
TGCATCGGTAGTTAATTCGAAGGGTTTCGA10.1176470588235294No Hit
TTTGAACAAAGGTTGTTGATAAGAGATT10.1176470588235294No Hit
TGCCGAACTCTGAGAAAAAGTCACCGTCGT10.1176470588235294No Hit
TGCCACGACGCATTTTCGTAGTTCTCCC10.1176470588235294No Hit
TCATCTGTGTTTGTGTTCGTGGAATAGG10.1176470588235294No Hit
TCGCTCCGATACATGGATTGAACTTCCT10.1176470588235294No Hit
TCGGTACTGACTCGACAAGCGCCTCGTACA10.1176470588235294No Hit
ATAACAGGAGTACGGCCCACAGTAGCGTC10.1176470588235294No Hit
TAAAATTAAAAAGAACGGTCCCACAGAC10.1176470588235294No Hit
TTTCACAATTTCCAACGTCTCGTTCCATC10.1176470588235294No Hit
TCCGATACATGGATTGAACTTCCTGAGTGT10.1176470588235294No Hit
TTTTCGTAGTTCTCCCCAAGTTTTTGTTTC10.1176470588235294No Hit
TGGCAGGAGATTGAACGTTTGTTTCGGTGT10.1176470588235294No Hit
TCAGGATATCGTCTAGAATTCTAGGTAGAC10.1176470588235294No Hit
TTGTTATCGATAGTTGGAATGTTGTGTTT10.1176470588235294No Hit
TCCGGAGGCATCTATTTTTTTGGGACCAC10.1176470588235294No Hit
TGGCTTCGTATTCACTGGCTTCCGCTTC10.1176470588235294No Hit
TTGAATTGCCGTGGCTCGGAAGTTGGGC10.1176470588235294No Hit
TGCCACGACGCATTTTCGTAGTTCTCCCCT10.1176470588235294No Hit
TATACGTCGTGTACGACGCGAGACCGCGG10.1176470588235294No Hit
TACTTGGATTTGTGGGATGATGGCATCGCC10.1176470588235294No Hit
TGTTGTAGACCTCTGTCGCACGGCC10.1176470588235294No Hit
TCTTGGATCGGAAATATTCATGGGGACGT10.1176470588235294No Hit
TGCCACGACGCATTTTCGTAGTTCTCCCCA10.1176470588235294No Hit
CTGCCTCCTGCCACCAATCCTTCTTGTTT10.1176470588235294No Hit
TTTGTTAACTGGCCGACTTCCCCCGCCTA10.1176470588235294No Hit
TTTTGTTAACTGGCCGACTTCCCCCGCC10.1176470588235294No Hit
TTCTTGTTCGGAAAAGTCGCTGGCTTC10.1176470588235294No Hit
TGTTAACTGGCCGACTTCCCCCGCCTGAAA10.1176470588235294No Hit
GAGGGGTGTTGCCGAAGCCATAAAAGGAC10.1176470588235294No Hit
AACGACCCGCTCTGTTCCATATCGATATTG10.1176470588235294No Hit
CTTTTTGTGAATTCGACTGTTAGGTGGGC10.1176470588235294No Hit
AACACAAGCCCGATCGCTCCGATACATG10.1176470588235294No Hit
AGGGAATTTTTGAATGGCTGCTATTTT10.1176470588235294No Hit
TTTTTTTTGGGCGGATTCTTTCGGGGGT10.1176470588235294No Hit
TCTGCGTTTCTTCTTCGTCGCTTGACGAAA10.1176470588235294No Hit
ATTGTCGAATAACCCACCTCTTGG10.1176470588235294No Hit
TTCGGTAGGGTCTATGTGCGAGTCACGAA10.1176470588235294No Hit
TCTGAGAAAAAGTCACCGTCGTCCTCATG10.1176470588235294No Hit
TCATGACTGCCTCCTGCCACCAATCCTTCT10.1176470588235294No Hit
TGACTTCAATTTGATGAAAGCCTGACGC10.1176470588235294No Hit
TCTTTTGTTAACTGGCCGACTTCCCCCG10.1176470588235294No Hit
TTCGAGAAATTGGGACACTGTAATATTGGG10.1176470588235294No Hit
TATAGACGTTAACGGCGCTGAGGGGTG10.1176470588235294No Hit
TGTGTCAGTGTTACTAATGATTCCTTCTTC10.1176470588235294No Hit
TCAGTGATTTCTGAAGGGATGTGATGGG10.1176470588235294No Hit
GGGCTCGGTACTGACTCGACAAGCGCC10.1176470588235294No Hit
TTAGACAGAATAATAACAGGAGTACGGC10.1176470588235294No Hit
TGAATTGCCGTGGCTCGGAAGTTGGGCTCG10.1176470588235294No Hit
TCACCGTCGTCCTCATGACTGCCTCCT10.1176470588235294No Hit
GGGATCCCGTAAGAAATACACGTCGTGTAC10.1176470588235294No Hit
TGGTGGGTCGACATTGGAGGGCGTCCTGT10.1176470588235294No Hit
TATTGTCGAATAACCCACCTCTTGTTGG10.1176470588235294No Hit
TCCATATCGATATTGTCGAATAACCCACCT10.1176470588235294No Hit

[OK]Adapter Content

Adapter graph