FastQCFastQC Report
Wed 31 Mar 2021
S34.15-35nt.orbivirus.NODE_5225.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.15-35nt.orbivirus.NODE_5225.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length15-35
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAACTTTGACCCTTGTTCCGACCGCCT211.11111111111111No Hit
CACAGATGCATCGGCATGTGGCGCTCGA211.11111111111111No Hit
TCCTCATTGGACCTTGTTCAACCCCCACCC211.11111111111111No Hit
TAATTTTTGACTCACTATA211.11111111111111No Hit
CACAGATGCATCGGCATGTGGCGCT15.555555555555555No Hit
ATACAGTGTTGTGCAGTACCCGG15.555555555555555No Hit
TTTGACACCAGCTCTCAACAACTTTTCCTT15.555555555555555No Hit
GAGAGTCTATGTGCTATCCTGCCCAC15.555555555555555No Hit
TTGTACTGTACAGTTGACATGTTCAACACGCCT15.555555555555555No Hit
TATCCTTCCATTTTTACCTCCTCGTGAC15.555555555555555No Hit
AAAATGTAGGTAGGT15.555555555555555No Hit
CTCCTCGTGACTCTTGTGTG15.555555555555555No Hit
ACGGGTACTTTTACGGGT15.555555555555555No Hit
TTTGACACCAGCTCTCAACAACTTTTCCTTGTACT15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)