FastQCFastQC Report
Wed 31 Mar 2021
S34.15-35nt.partitivirus.NODE_4444.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.15-35nt.partitivirus.NODE_4444.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78
Sequences flagged as poor quality0
Sequence length15-35
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATGGTCACTGCATTCGCCTTGCACGCGGGA67.6923076923076925No Hit
TTCGGGGCCCACCTAGC56.41025641025641No Hit
TGATCACTGCATTCGCCTTGCACGCGGGA45.128205128205128No Hit
GTTTTCGGGGCCCAC33.8461538461538463No Hit
TGAATTCGCCTTGCACGCGGGAGA33.8461538461538463No Hit
TAATAAGGTACCCTCACCAAATAAGGCC33.8461538461538463No Hit
AATGGTCACTGCATTCGCCTTGCACGCGGG33.8461538461538463No Hit
TAAGGTACCCTCACCAAATAAGGCCCACTT22.564102564102564No Hit
GGATTATTGGAGATATTGGAACATGAATTT22.564102564102564No Hit
TGGTCACTGCATTCGCCTTGCACGCGGGA22.564102564102564No Hit
ATGGTCACTGCATTCGCCTTGCACGCGGG22.564102564102564No Hit
TGTGAGAATCCTGCCGTTAAAGCCTAAA22.564102564102564No Hit
TAAGGTACCCTCACCAAATAAGGCCCACT22.564102564102564No Hit
TTGTGGAAGGCGGACGCCGAACGACAA22.564102564102564No Hit
ACAAATGACGCCGAAGTGAACCCAGC22.564102564102564No Hit
AAATGCACATAGCGACCCGGT22.564102564102564No Hit
ATGGTCACTGCATTCGCCTTGCACGCGGGA22.564102564102564No Hit
TACTTGAGCCCTGAATTGAACGTGAGTTGCA22.564102564102564No Hit
ATGGTCACTGCATTCGCCTTGCACGCGGGAG22.564102564102564No Hit
CTCGTGAGGAAAATAGGTAGCTAGG22.564102564102564No Hit
CACCTAGCCTCGTGAGGAAAATAGGTAGCT11.282051282051282No Hit
AGCCTCGTGAGGAAAATAGGTAGGTA11.282051282051282No Hit
TTTCGGGGCCCACCT11.282051282051282No Hit
TTTCGGGGCCCACCTA11.282051282051282No Hit
TAGCCTCGTGAGGAAAATAGGTAGCTA11.282051282051282No Hit
TCACTGCATTCGCCTTGCACGCGGGAG11.282051282051282No Hit
TAGAATCCTGCCGTTAAAG11.282051282051282No Hit
TTCGCCTTGCACGCGGGAGATCCGGGTTCG11.282051282051282No Hit
ATTCCCATGACTCCCCAGGATTGTC11.282051282051282No Hit
CTTAGCCTCGTGAGGAA11.282051282051282No Hit
TGACTGTCTGTTTTCGGGGCCCACCTAGC11.282051282051282No Hit
TCGGGGCCCACCTAGC11.282051282051282No Hit
TGGTACTGCATTCGCCTTGCACGCGGGA11.282051282051282No Hit
TGGTCACTGCATTCGCCTTGCACGCGGGAG11.282051282051282No Hit
TGGTCACTGCATTCGCCTTGCACGCGG11.282051282051282No Hit
TCACTGCATTCGCCTTGCACGCAGGAGATCCGGGT11.282051282051282No Hit
TCACTGCATTCGCCTTGCACGCGGGAGACCT11.282051282051282No Hit
TTGGCTGTTTTCGGGGCCCACCTAGC11.282051282051282No Hit
TTTATGTTTATTGTGGAAGGCGGACGCCG11.282051282051282No Hit
TGGGAGACGCTGCAGATAGTCGAAGGCA11.282051282051282No Hit
TCACTGCATTCGCCTTGCACGCGGGAGA11.282051282051282No Hit
TAAAAATGCACATAGCGACCCGGTGCCA11.282051282051282No Hit
TGATCACTGCATTCGCCTTGCACGCGGGAG11.282051282051282No Hit
TCACTGCATTCGCCTTGCACGCGGGAGACCC11.282051282051282No Hit
TGGTACTGCATTCGCCTTGCACGCGGGAG11.282051282051282No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)