FastQCFastQC Report
Mon 17 Jun 2024
S34.15-35nt.6787.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.15-35nt.6787.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length15-31
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGCACCAGTATGTAGGTTCGTCCTGTG1150.0No Hit
ACCGCACTGCAAACAAAAAACCC313.636363636363635No Hit
CACCGCACTGCAAACAAAAAACCC14.545454545454546No Hit
GCACCGCACTGCAAACAAAAAACCC14.545454545454546No Hit
TGAGCACCAGTATGTAGGTTCGTCCTGTGA14.545454545454546No Hit
TCAATAATCAAAGAGGTCACGTGTTCACCTT14.545454545454546No Hit
GCACCGCACTGCAAACAAAAAACCCCG14.545454545454546No Hit
TCAATAATCAAAGAGGTCACGTGTTCAC14.545454545454546No Hit
AATAGACGCCTCTCC14.545454545454546No Hit
AGTGCCGACTTGGAGC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)