FastQCFastQC Report
Mon 17 Jun 2024
S34.15-35nt.6787.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.15-35nt.6787.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1045
Sequences flagged as poor quality0
Sequence length16-35
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGTCGGAATACCACTCGCCCCTGCAGTT11310.813397129186603No Hit
TAGGACGCACAGTACCAACACAGGATATCCC323.062200956937799No Hit
TTGTAGATCGCTCGTTGTCCCTCTCAACAG302.8708133971291865No Hit
TCCCAATAGTTATGTCCCGTCCACTGGTC222.1052631578947367No Hit
TGTAGATCGCTCGTTGTCCCTCTCAACAG222.1052631578947367No Hit
TTCGGCTCCTAAGACTCCAGTGTAACCTG191.8181818181818181No Hit
TGGTCGGAATACCACTCGCCCCTGCAGTT181.7224880382775118No Hit
TATGTCCCGTCCACTGGTCCACGCAATGCC161.5311004784688995No Hit
TCCCACGAACCGTATTGGTCGGAATACCACTC131.244019138755981No Hit
TTCGGCTCCTAAGACTCCAGTGTAACCT121.1483253588516746No Hit
TTCAAGGCTCCCCTGGACCACGACACCGTC121.1483253588516746No Hit
TCCCGTCCACTGGTCCACGCAATGCCCCTT111.0526315789473684No Hit
TCACCCAACTCGTCTCTAGCTGATACATCGT90.8612440191387559No Hit
TATGTCCCGTCCACTGGTCCACGCAATGCCT90.8612440191387559No Hit
TGGTGCGGAATTGTGTCAGCGATCTGGAC80.7655502392344498No Hit
TATTGGTCGGAATACCACTCGCCCCTGCAG80.7655502392344498No Hit
TTCAAGGCTCCCCTGGACCACGACACCGT80.7655502392344498No Hit
TATAGATCACTTCGGCTCCTAAGACTCC80.7655502392344498No Hit
TCCTGTAGTCCTGAGAGCGAAGGCCCATT80.7655502392344498No Hit
TAGATACCTGCAGTTGCTAGATGATCCAAAC80.7655502392344498No Hit
TAACATCTCTCAGTCCGTCGCACTGTGA80.7655502392344498No Hit
TGCAGTTTTTCCCGTCGTACAAGTCCCCT80.7655502392344498No Hit
TCAAGGCTCCCCTGGACCACGACACCGTC80.7655502392344498No Hit
TCCAAACCATTGTCGCTCCATGTCCCGGGT80.7655502392344498No Hit
TGAAGTCGAGCTGAGAGGCGTCTACACCT60.5741626794258373No Hit
TCCACTCTGAGATGCTAGGCCAAATGCTTTT60.5741626794258373No Hit
TTTTCCCGTCGTACAAGTCCCCTGCTACGA60.5741626794258373No Hit
TTGGAGTTAATGTACGACATGAAGTCGAGC60.5741626794258373No Hit
TCAAGGCTCCCCTGGACCACGACACCGT60.5741626794258373No Hit
TCCGTCGTGTACGCCTCTCCTATGCATGC60.5741626794258373No Hit
TTCCACTCTGAGATGCTAGGCCAAATGCTT60.5741626794258373No Hit
TGTCCCGTCCACTGGTCCACGCAATGCCCCT60.5741626794258373No Hit
TCAAGGCTCCCCTGGACCACGACACC50.4784688995215311No Hit
TCCCGTCCACTGGTCCACGCAATGCCCCT50.4784688995215311No Hit
TGACAATATAGATCACTTCGGCTCCTAAGAC50.4784688995215311No Hit
TCCAAACCATTGTCGCTCCATGTCCCGGG50.4784688995215311No Hit
TTCCTCGTTGATGGTCCGTGCCATGAAGAC50.4784688995215311No Hit
TTAATCATTGTAGATCGCTCGTTGTCCCTC50.4784688995215311No Hit
TACGCAACGAGGCCGTGGCAGATAGCAAACC50.4784688995215311No Hit
TTTTTCCCGTCGTACAAGTCCCCTGCTACGA40.3827751196172249No Hit
AAGGCTCCCCTGGACCACGACACCGTCCC40.3827751196172249No Hit
TACATGGTCTCCATAACGTCCTCATCAAGG40.3827751196172249No Hit
TCATGCATAGCTCTGCATTCATCCCGAG40.3827751196172249No Hit
TTCCGTCGTGTACGCCTCTCCTATGCATGC40.3827751196172249No Hit
TTCAAGCTGAAACCCCCTGCGACCCTTCT40.3827751196172249No Hit
TATTGGTCGGAATACCACTCGCCCCTGC40.3827751196172249No Hit
TCTGTCGGGGCAATGGTGTCAACATTCACA40.3827751196172249No Hit
TTGGCGCATTTACTACCTGAGGAGCAGGAG40.3827751196172249No Hit
TGCATGCTTCGTAGGCTCCTGTAGTCCT40.3827751196172249No Hit
TCTCAGTCCGTCGCACTGTGACATCCACT40.3827751196172249No Hit
TAGATCACTTCGGCTCCTAAGACTCCAGT40.3827751196172249No Hit
TCATGCATAGCTCTGCATTCATCCCGAGAT40.3827751196172249No Hit
TCCTTGTAGATCGCTCGTTGTCCCTCTCA40.3827751196172249No Hit
TTCCGCATACGCTCCAAGTCGGCAGAGGT40.3827751196172249No Hit
TTGGTCGGAATACCACTCGCCCCTGCAGT40.3827751196172249No Hit
TCCTCGTTGATGGTCCGTGCCATGAAGACA30.28708133971291866No Hit
TCATGCATAGCTCTGCATTCATCCCGAGA30.28708133971291866No Hit
TAGCTCTGCATTCATCCCGAGATACATCCAG30.28708133971291866No Hit
TCTGGATGATCACGAGCTTGGGATGTTCC30.28708133971291866No Hit
TCACCCAACTCGTCTCTAGCTGATACATC30.28708133971291866No Hit
TAGTTATGTCCCGTCCACTGGTCCACG30.28708133971291866No Hit
TATTGGTCGGAATACCACTCGCCCCTG30.28708133971291866No Hit
TCGGAATACCACTCGCCCCTGCAGTT30.28708133971291866No Hit
TCCTGTAGTCCTGAGAGCGAAGGCCCA30.28708133971291866No Hit
TGTTTTGGATGTACATCTTGAGGGCACTT30.28708133971291866No Hit
TTCCGTCGTGTACGCCTCTCCTATGCATG30.28708133971291866No Hit
TACGCGTAATCGACCGGGTGTGATCGTGC30.28708133971291866No Hit
TCAGTCCGTCGCACTGTGACATCCACTGGG30.28708133971291866No Hit
TCCCCTGCTACGATGAGCTGTCGAGTTATC30.28708133971291866No Hit
ATGGTGCGGAATTGTGTCAGCGATCTGGAC30.28708133971291866No Hit
TATGTCCCGTCCACTGGTCCACGCAATGCCCCT30.28708133971291866No Hit
TTAGGACGCACAGTACCAACACAGGATATCCC30.28708133971291866No Hit
TCGCCCCTGCAGTTTTTCCCGTCGTACAAGT30.28708133971291866No Hit
TGTGTCAGCGATCTGGACTAACTGGATGGT30.28708133971291866No Hit
TGTGATCGTGCTGTAGCTTGAAGGGATT30.28708133971291866No Hit
TTTCAAGGCTCCCCTGGACCACGACACCGT30.28708133971291866No Hit
TTGAAACCCCCTGCGACCCTTCTGGATGATC30.28708133971291866No Hit
TTCGGCTCCTAAGACTCCAGTGTAACCTGG30.28708133971291866No Hit
TCCGTCGCACTGTGACATCCACTGGGAC30.28708133971291866No Hit
TTTCAAGGCTCCCCTGGACCACGACACC30.28708133971291866No Hit
TCGGCTCCTAAGACTCCAGTGTAACCTG30.28708133971291866No Hit
TACCACTCGCCCCTGCAGTTTTTCCCGTC30.28708133971291866No Hit
TAGGACGCACAGTACCAACACAGGATATCC30.28708133971291866No Hit
TATAACATCTCTCAGTCCGTCGCACTGTGAA30.28708133971291866No Hit
TATGTCCCGTCCACTGGTCCACGCAATGCCCC30.28708133971291866No Hit
TCCCGTCGTACAAGTCCCCTGCTACG30.28708133971291866No Hit
TCCAAGTCGGCAGAGGTATAGATACCTGC30.28708133971291866No Hit
CTTCGGCTCCTAAGACTCCAGTGTAACCT30.28708133971291866No Hit
TTTGGAGTTAATGTACGACATGAAGTCGAGC30.28708133971291866No Hit
TAGGCTCCTGTAGTCCTGAGAGCGAAGGCCC30.28708133971291866No Hit
TTGTACGCAACGAGGCCGTGGCAGATAGC30.28708133971291866No Hit
TTTTCCCGTCGTACAAGTCCCCTGCTACG30.28708133971291866No Hit
TTCAAGGCTCCCCTGGACCACGACACCGTCA20.19138755980861244No Hit
TGGTCCGTGCCATGAAGACAAATTTGGAGTT20.19138755980861244No Hit
TTATGTCCCGTCCACTGGTCCACGCAATGCC20.19138755980861244No Hit
TGTCCCGTCCACTGGTCCACGCAATGCCCC20.19138755980861244No Hit
TACATCGGTTTGGTTAGTTCGTTGCACACT20.19138755980861244No Hit
TCACAGTTGTACGCAACGAGGCCGTGGC20.19138755980861244No Hit
TGGATTTCCTCGTTGATGGTCCGTGCCATGA20.19138755980861244No Hit
TCGCTCCATGTCCCGGGTTGCGCTGGTG20.19138755980861244No Hit
TAGGTATACGCGTAATCGACCGGG20.19138755980861244No Hit
TACATCGTTTTGGTTAGTTCGTTGCACACT20.19138755980861244No Hit
TAGATCGCTCGTTGTCCCTCTCAACAG20.19138755980861244No Hit
TCAAGGCTCCCCTGGACCACGACAC20.19138755980861244No Hit
TCCACAACACATCTTCTGTACTCCAGCTTC20.19138755980861244No Hit
TTCAATTTGTACGTCATATGATCCCCTTCC20.19138755980861244No Hit
TGTCACCCAACTCGTCTCTAGCTGATACATC20.19138755980861244No Hit
TTGTAGATCGCTCGTTGTCCCTCTCAA20.19138755980861244No Hit
TTTGCGGACTGGAATAACATCTTTGGAAAGT20.19138755980861244No Hit
GCTGTCGAGTTATCGTAGAATTTGGTGTT20.19138755980861244No Hit
TCGTGTATGAATTCCAGCCGCAATAGGTT20.19138755980861244No Hit
TGCTTCGTAGGCTCCTGTAGTCCTGAGAGC20.19138755980861244No Hit
ATAACATCTCTCAGTCCGTCGCACTGTGAC20.19138755980861244No Hit
TAGGAGACATTCGGAACATGGATCGATTC20.19138755980861244No Hit
TCAAGGACGCAGTGTCACAGTTGTAC20.19138755980861244No Hit
TCGTTATAACATCTCTCAGTCCGTCGCACT20.19138755980861244No Hit
TTGGACACTCCCTCGTACAAGACCACATG20.19138755980861244No Hit
TATAACATCTCTCAGTCCGTCGCACT20.19138755980861244No Hit
CGCACTGTGACATCCACTGGGACACACTT20.19138755980861244No Hit
TATTGGTCGGAATACCACTCGCCCCTGCAGA20.19138755980861244No Hit
CTCCCCTGGACCACGACACCGTCCCACGAA20.19138755980861244No Hit
TCTGGATGATCACGAGCTTGGGATGTT20.19138755980861244No Hit
TTTCCTCGTTGATGGTCCGTGCCATGAAG20.19138755980861244No Hit
TACTGTAGACAAAGTAGCCACTGACTCACC20.19138755980861244No Hit
TCAAGGACGCAGTGTCACAGTTGTACGC20.19138755980861244No Hit
TGACAATATAGATCACTTCGGCTCCTAAGA20.19138755980861244No Hit
TTGACAATATAGATCACTTCGGCTCCTAAG20.19138755980861244No Hit
GTAGATCGCTCGTTGTCCCTCTCAACAG20.19138755980861244No Hit
TAACCTGGAGAGTCTTTGTAGGTATACGC20.19138755980861244No Hit
TATTCAAGCTGAAACCCCCTGCGACCCTTCT20.19138755980861244No Hit
TCCCAATAGTTATGTCCCGTCCACTGGTCCAC20.19138755980861244No Hit
TATACGCGTAATCGACCGGGTGTGATCGT20.19138755980861244No Hit
TATTCAAGTTGAAACCCCCTGCGACCCT20.19138755980861244No Hit
TCAAGGCTCCCCTGGACCACGACACCGTCC20.19138755980861244No Hit
TAGATCGCTCGTTGTCCCTCTCAATAGACT20.19138755980861244No Hit
TTCAAGGCTCCCCTGGACCACGACACCGCA20.19138755980861244No Hit
TATTCCACTCTGAGATGCTAGGCCAAATGC20.19138755980861244No Hit
CGACCGGGTGTGATCGTGCTGTAGCTTGA20.19138755980861244No Hit
TATTGGTCGGAATACCACTCGCCCCTGCA20.19138755980861244No Hit
TGAGAGAATTCCGCATACGCTCCAAGTCGGC20.19138755980861244No Hit
TTCCTCGTTGATGGTCCGTGCCATGAAG20.19138755980861244No Hit
TAATCATTGTAGATCGCTCGTTGTCCCTCT20.19138755980861244No Hit
TGTACGCAACGAGGCCGTGGCAGATAGCA20.19138755980861244No Hit
TCACCCAACTCGTCTCTAGCTGATACATCG20.19138755980861244No Hit
TCTATTAGGACGCACAGTACCAACACAGG20.19138755980861244No Hit
AATCGACCGGGTGTGATCGTGCTGTAGCT20.19138755980861244No Hit
TTCAAGGCTCCCCTGGACCACGACACC20.19138755980861244No Hit
TCGAGTTATCGTAGAATTTGGTGTTAGCC20.19138755980861244No Hit
TCTCAAATACATGGTCTCCATAACGTCCT20.19138755980861244No Hit
TAACATCTCTCAGTCCGTCGCACTGTGAC20.19138755980861244No Hit
TGTAGATTTCAACGCTGACTCACGTGCTGGT20.19138755980861244No Hit
TATTCCACTCTGAGATGCTAGGCCAAATG20.19138755980861244No Hit
TCGGAATACCACTCGCCCCTGCAGTTTT20.19138755980861244No Hit
TCGGCTCCTAAGACTCCAGTGTAACCTGG20.19138755980861244No Hit
TAGCCACTGACTCACCGTGGAACATGAGAG20.19138755980861244No Hit
TCCGTCGTGTACGCCTCTCCTATGCATG20.19138755980861244No Hit
TCGGAATACCACTCGCCCCTGCAGTTTTTC20.19138755980861244No Hit
CAATATAGATCACTTCGGCTCCTAAGACT20.19138755980861244No Hit
TAGATGATCCAAACCATTGTCGCTCCATGT20.19138755980861244No Hit
TCCCAATAGTTATGTCCCGTCCACTGGTCCACG20.19138755980861244No Hit
TCAAGGCTCCCCTGGACCACGACACCGTCCC20.19138755980861244No Hit
TATGTCCCGTCCACTGGTCCACGCAATGCCCCTT20.19138755980861244No Hit
TACAAGTCCCCTGCTACGATGAGCTGTC20.19138755980861244No Hit
TATTCAAGCTGAAACCCCCTGCGACCCTTC20.19138755980861244No Hit
TACTCCACAACACATCTTCTGTACTCCAGCCT20.19138755980861244No Hit
TACACCTGAATATTCAAGCTGAAACCCCCT20.19138755980861244No Hit
CACTGGGACACACTTGACAATATAGATCACT20.19138755980861244No Hit
TTTGTAGGTATACGCGTAATCGACCGGGT20.19138755980861244No Hit
TCAAATACATGGTCTCCATAACGTCCTCAT20.19138755980861244No Hit
TTGTACGCAACGAGGCCGTGGCAGATAGCAAACC20.19138755980861244No Hit
TCGCACTGTGACATCCACTGGGACACACTT20.19138755980861244No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)