FastQCFastQC Report
Mon 16 Nov 2020
S34.15-35nt.16463.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.15-35nt.16463.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163
Sequences flagged as poor quality0
Sequence length15-35
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCCCCGCCTGCCTATATGAG1710.429447852760736No Hit
TATTACGGCCGCCGATTTGTTTCTCTTGG63.6809815950920246No Hit
TATTACGGCCGCCGATTTGTTTCTCTTGGC63.6809815950920246No Hit
CCCCCCGCCTGCCTATATGAG63.6809815950920246No Hit
CCCCCCGCCTGCCTATATGAGT53.067484662576687No Hit
CCCCCCCGCCTGCCTATATGAG53.067484662576687No Hit
ACCCCCCGCCTGCCTATATGAGT53.067484662576687No Hit
TTATTACGGCCGCCGATTTGTTTCTCTT42.4539877300613497No Hit
CCCCCGCCTGCCTATATGAGTT31.8404907975460123No Hit
TGAAAGTTCAATTTATTTATTACGGCCGCC31.8404907975460123No Hit
CCCCGCCTGCCTATATGAGTTGAACCCATCTCA31.8404907975460123No Hit
TACGGCCGCCGATTTGTTTCTCTTGG31.8404907975460123No Hit
TTTTCCACCCCCCGCCTGCCT31.8404907975460123No Hit
CACCCCCCGCCTGCCTATATGA31.8404907975460123No Hit
CACCCCCCGCCTGCCTATATGAGTTGAACC31.8404907975460123No Hit
TTGAACCAATCTCATG31.8404907975460123No Hit
CGCCCGCCGGTTTGTTTCTCTTGG21.2269938650306749No Hit
CACCCCCCGCCTGCCTATATGAA21.2269938650306749No Hit
TAGGAAGTGGCTACTCG21.2269938650306749No Hit
ACCCCCCGCCTGCCTATATGAC21.2269938650306749No Hit
CACCCCCCTCCTGCCTATATGA21.2269938650306749No Hit
AGCTTTTCCACCCCCCGCCTGCCTA21.2269938650306749No Hit
CACCCCCGCCTGCCT21.2269938650306749No Hit
CTCCACCCCCCGCCT21.2269938650306749No Hit
CCCCCGCCTGCCTATAT21.2269938650306749No Hit
ACCCCCCGCCTGCCTATATGA21.2269938650306749No Hit
TGCCACTTGGGAGCGCTAGTAGTAAAAACAG21.2269938650306749No Hit
CCCGCCTGCCTATATGAGTTGAA21.2269938650306749No Hit
CACCCCCGCCTGCCTATATGAG21.2269938650306749No Hit
TTACGGCCGCCGATTTGTTTCTCTTGG21.2269938650306749No Hit
CCCCCCGCCTGCCTAT21.2269938650306749No Hit
TCCACCCCCCGCCTGCCTATGTGAGTTGAAC21.2269938650306749No Hit
TTTTCCACCCCCCGCCTGCCTATATGAGTT21.2269938650306749No Hit
CACCCCCCGCCTGCCTATATGAG10.6134969325153374No Hit
TCCACCCCCCGCCTGCCTATAT10.6134969325153374No Hit
TTTATTACGGCCGCCGATTTGTTTCTCTT10.6134969325153374No Hit
CCCCGCCTGCCTATAT10.6134969325153374No Hit
ACCCCCCGCCTGCCTATGTGAGTTGAACC10.6134969325153374No Hit
CCCCCGCCTGCCTATATGAGTTGAACCC10.6134969325153374No Hit
CAGTAGATTACAGGCC10.6134969325153374No Hit
CACCCCCGCCTGCCTATATGA10.6134969325153374No Hit
CCCCGCCTGCCTATATGAGTTGAACC10.6134969325153374No Hit
TTCCACCCCCCGCCTGCCTATATGAGTTGAA10.6134969325153374No Hit
TACTTGGGAGCGCTAGTAGTAAAAACAGC10.6134969325153374No Hit
TCCCCCCCGCCTGCC10.6134969325153374No Hit
TATAATACATTCTTAAATAATACCCCCCAA10.6134969325153374No Hit
TATTACGGCCGCCGATTTGTTTCTCTTG10.6134969325153374No Hit
TTTCCACCCCCCGCCTGCCTATATG10.6134969325153374No Hit
TTATTACGGCCGCCGATTTGTTTCTCTTG10.6134969325153374No Hit
GTAAAAACAGAACTCTCTATAGTAGGCTT10.6134969325153374No Hit
TTTCCACCCCCCTCCTGCCTATATGAGTT10.6134969325153374No Hit
CCCCGCCTGCCTATATGAGTTGAACCC10.6134969325153374No Hit
TTATTTATTACGGCCGCCGATTTGTTTCT10.6134969325153374No Hit
CCCCGCCTGCCTATATGA10.6134969325153374No Hit
ACCCCCGCCTGCCTATATGAGTTGAACC10.6134969325153374No Hit
CACCCCCCGCCTGCCTATATGAGTTG10.6134969325153374No Hit
GGCCGCCGGTTTGTTTCTCTTGGC10.6134969325153374No Hit
TAGGAAACGAAGCCTCAAAAACGCCTTTTC10.6134969325153374No Hit
TTCCACCCCCCTCCTGCCTATATGAG10.6134969325153374No Hit
ACCCCCCGCCTGCCTATATGAGTT10.6134969325153374No Hit
TCCACCCCCGCCTGCCTATATGAGTTGA10.6134969325153374No Hit
CTACTCGCCCGCCCG10.6134969325153374No Hit
TGCCACTTGGGAGCGCTAGTAGTAAAAACA10.6134969325153374No Hit
CCACCCCCCGTCTGCCTATATGAGTTGAAC10.6134969325153374No Hit
ACCCCCGCCTGCCTATATGA10.6134969325153374No Hit
CCTCCGCCTGCCTATATGAGT10.6134969325153374No Hit
TTTCCACCCTCCGCCTGCCTATATG10.6134969325153374No Hit
CACCCCCCTCCTGCCTATATGAGTT10.6134969325153374No Hit
TTCCACCCCCCGCCTGCCTATA10.6134969325153374No Hit
TGTTTCTCTTGGCGAGTACTTTACGCGT10.6134969325153374No Hit
GAAGCCTCAAAAACGCCT10.6134969325153374No Hit
CCCCGCCTGCCTATATG10.6134969325153374No Hit
TAGGAAACGAAGCCTCAAAAACGCC10.6134969325153374No Hit
CCCCGCCTGCCTATATGAGTT10.6134969325153374No Hit
CCACCCCCCGCCTGCCTATA10.6134969325153374No Hit
ATGCAGGACACTTGTGACCACACGAG10.6134969325153374No Hit
CACCCCCGCCTGCCTATATGAGTT10.6134969325153374No Hit
ACAAATGTTGTACTATTTTATTTCTGTATGTA10.6134969325153374No Hit
TTATTACGGCCGCCGATTTGTTTCTCTTGGCGAG10.6134969325153374No Hit
TTTCCACCCCCCGCCTGCCTATATT10.6134969325153374No Hit
TTTATTACGGCCGCCGATTTGTTTCTCTTG10.6134969325153374No Hit
TAGTAAAAACAGAACTCTCTATAGTAGGCT10.6134969325153374No Hit
CCCTGCCTGCCTATATGAGTTGAACC10.6134969325153374No Hit
CTTAGGTTATTTCCACCCCCCGCCTGCCTATATGA10.6134969325153374No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)