FastQCFastQC Report
Mon 30 Nov 2020
S34.raw.2829.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.raw.2829.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences692
Sequences flagged as poor quality0
Sequence length11-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTACCCACTCTCGTTGCTCCTCTGGCATA547.803468208092486No Hit
TACCCACTCTCGTTGCTCCTCTGGCATAGCC365.202312138728324No Hit
TACCCACTCTCGTTGCTCCTCTGGCATAGC294.190751445086705No Hit
TGTTCTACCCACTCTCGTTGCTCCTCTGGC273.901734104046243No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCAAG243.4682080924855487No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCA233.3236994219653178No Hit
ATAGGACGGAGCACCTGACCCTGCCAGG172.4566473988439306No Hit
TCTCGTTGCTCCTCTGGCATAGCCCCACAG142.023121387283237No Hit
ATAGGACGGAGCACCTGACCCTGCCAGGCA142.023121387283237No Hit
TGTGTTGTTCTACCCACTCTCGTTGCTCC131.8786127167630058No Hit
TTCTACCCACTCTCGTTGCTCCTCTGGC121.7341040462427744No Hit
TACCCACTCTCGTTGCTCCTCTGGCATAG111.5895953757225432No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCAA101.4450867052023122No Hit
TCTACCCACTCTCGTTGCTCCTCTGGCATAG101.4450867052023122No Hit
GAAAGAAACAGTTAAGGGAGGACCACTC91.300578034682081No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCAC81.1560693641618496No Hit
CCACTCTCGTTGCTCCTCTGGCATAGCCCC71.0115606936416186No Hit
TACCCACTCTCGTTGCTCCTCTGGCATAGCCC60.8670520231213872No Hit
GAGAATTGCAACGATAGGTAGGAAATCCTCATGGAT60.8670520231213872No Hit
TCCATGCTATCCTGGGTTCCCCACACTGGC60.8670520231213872No Hit
TTCTACCCACTCTCGTTGCTCCTCTGGCATA60.8670520231213872No Hit
GAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGG60.8670520231213872No Hit
TTCTACCCACTCTCGTTGCTCCTCTG50.7225433526011561No Hit
TGTTGTTCTACCCACTCTCGTTGCTCCTC50.7225433526011561No Hit
TAGGACGGAGCACCTGACCCTGCCAGG50.7225433526011561No Hit
TGGTCAATCGCTAAAAGAACGCTGTGTTGT50.7225433526011561No Hit
TCTCGTTGCTCCTCTGGCATAGCCCCACA50.7225433526011561No Hit
TGTGTTGTTCTACCCACTCTCGTTGCT50.7225433526011561No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCATA40.5780346820809248No Hit
TGATTGTGGTCAATCCCATGCACCCTCCCC40.5780346820809248No Hit
ATAGGACGGAGCACCTGACCCTGCCAGGC40.5780346820809248No Hit
CGCTGTGTTGTTCTACCTACTCTCGTTGCTCCTCT40.5780346820809248No Hit
GAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGGCAAGTACCTACC30.4335260115606936No Hit
GAAACAGTTAAGGGAGGACCACTCCTCTCCTTCCAAAGAAAGAATAAGTG30.4335260115606936No Hit
TGTGTTGTTCTACCCACTCTCGTTGCTC30.4335260115606936No Hit
TACTCCGTTAGTAGAGCTCCATGCTATCCT30.4335260115606936No Hit
TCTACCCACTCTCGTTGCTCCTCTGGCATAGCC30.4335260115606936No Hit
ACCCACTCTCGTTGCTCCTCTGGCATAGCCC30.4335260115606936No Hit
TAACAATGGTCAATCGCTAAAAGAACTCCGT30.4335260115606936No Hit
ATAGGACGGAGCACCTGACCCTGCC30.4335260115606936No Hit
AATAGGACGGAGCACCTGACCCTGCCAGG30.4335260115606936No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCAAA30.4335260115606936No Hit
TCCTGGGAAAGAAACAGTTAAGGGAGGAC30.4335260115606936No Hit
TGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGCCCCAC30.4335260115606936No Hit
CATGCTATCCTGGGTTCCCCA30.4335260115606936No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCAT30.4335260115606936No Hit
ATTGCAACGATAGGTAGGAAATCCTCATGGAT30.4335260115606936No Hit
TAACGCGTACTCCGTTAGTAGAGCTCC30.4335260115606936No Hit
GACGGGACTGA30.4335260115606936No Hit
TGTTGTTCTACCCACTCTCGTTGCTCCT30.4335260115606936No Hit
TGTTCTACCCACTCTCGTTGCTCCT30.4335260115606936No Hit
ACCCACTCTCGTTGCTCCTCTGGCATAGCC30.4335260115606936No Hit
TCCGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGCCCCACA30.4335260115606936No Hit
TGTGTTGTTTTACCCACTCTCGTTGCTCCT30.4335260115606936No Hit
AACAATGGTCAATCGCTAAAAGAACGCTGT30.4335260115606936No Hit
GTTGTTCTACCCACTCTCGTTGCTCCTCTGGC30.4335260115606936No Hit
TTGTTCTACCCACTCTCGTTGCTCCTCTG30.4335260115606936No Hit
ACGCGTACTCCGTTAGTA30.4335260115606936No Hit
TATAACAATGGTCAATCGCTAAAAGAACGCTGTGTTTTACT20.2890173410404624No Hit
AATAGGACGGAGCACCTGACCCTGCCAGGC20.2890173410404624No Hit
TAGGGCTGGAAAGGATGCGACATACGC20.2890173410404624No Hit
GTACTCCGTTAGTAGAGCTCCA20.2890173410404624No Hit
ACTCTCGTTGCTCCTCTGGCATAGCCCCACA20.2890173410404624No Hit
GAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCA20.2890173410404624No Hit
TCCGTGTTGTTCTACCCACTCTCGTTGCTC20.2890173410404624No Hit
TATAACAATGGTCAATCGCTAAAAGAACGCT20.2890173410404624No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCATC20.2890173410404624No Hit
TGTTCTACCCACTCTCGTTGCTCCTCTGGCA20.2890173410404624No Hit
ACGCGTACTCCGTTAGTAGAGC20.2890173410404624No Hit
GTAACAATGGTCAATCGCTCAAAGAACGCTGTGTTGTTCTACCTACTCTCGTTGCTCCTC20.2890173410404624No Hit
TGTTGTTCTACCCACTCTCGT20.2890173410404624No Hit
ACTCTCGTTGCTCCTCTGGCATAGCCCCAC20.2890173410404624No Hit
TGTTCTACCCACTCTCGTTGCTCCTCTGG20.2890173410404624No Hit
CCACTCTCGTTGCTCCTCTGGCATAG20.2890173410404624No Hit
TACTCCAATTTAATTACAATAGTCAGTCAGT20.2890173410404624No Hit
TTCGAAGATCTCCGTGGGCTCCTCTCAGC20.2890173410404624No Hit
TAAAACTGTGGTGAGAATTGCAACGATAGGTAGGA20.2890173410404624No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCAAC20.2890173410404624No Hit
CGCGTACTCCGTTAGTAGAGCTCCATGCTA20.2890173410404624No Hit
ACAATGGTCAATCGCTAAAAGAACGCTGT20.2890173410404624No Hit
TGTGTTGTTTTACCCACTCTCGTTGCT20.2890173410404624No Hit
TGTTGTTCTACCCACTCTCGTTGCTCCTCT20.2890173410404624No Hit
TCCATGCTATCCTGGGTTCCCCACACTGG20.2890173410404624No Hit
TACCCACTCTCGTTGCTCCTCT20.2890173410404624No Hit
CATGCACCCTCCCCAAAGTCAGCCAGATT20.2890173410404624No Hit
GCTGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAG20.2890173410404624No Hit
TGTTCTACCCACTCTCGTTGCTCCTCTGGG20.2890173410404624No Hit
TAACAATGGTCAATCGCTAAAAGAACGCT20.2890173410404624No Hit
CGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGC20.2890173410404624No Hit
TGTGTTGTTCTATCCACTCTCGTTGCTCC20.2890173410404624No Hit
GCACTTATAACAATGGTCAATCGCTAAAAGAACGCTGTGTTGT20.2890173410404624No Hit
TACCCACTCTCGTTGCTCCT20.2890173410404624No Hit
TGCAACGATAGGTAGGAAATCCTCATGGAT20.2890173410404624No Hit
GTTCTACCCACTCTCGTTGCTCCTCTGGCATA20.2890173410404624No Hit
CTACCCACTCTCGTTGCTCCTCTGGCATAGCC20.2890173410404624No Hit
TCAACCCACTCTCGTTGCTCCT20.2890173410404624No Hit
TCTCGTTGCTCCTCTGGCATAGCCCC20.2890173410404624No Hit
ATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGGCAAGTACC20.2890173410404624No Hit
TTACCCACTCTCGTTGCTCCTCTGGCATAGC20.2890173410404624No Hit
TAAAAGAACGCTGTGTTGCTCTACCCACTC20.2890173410404624No Hit
AACAATGGTCAATCGCTAAAAGAACTCCGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGCCCCACAGG20.2890173410404624No Hit
TACCCACTCTCGTTGCTCCTCTGGC20.2890173410404624No Hit
TAAAAGAACTCTGTGTTGTTCTACCCACTCTCGTTGCT20.2890173410404624No Hit
TTGTGGTCAATCCCATGCACCCTCCCCA20.2890173410404624No Hit
TGTGTTGTTTTACCCACTCTCGTTGCTCC20.2890173410404624No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCAAGT20.2890173410404624No Hit
TTCTACCCACTCTCGTTGCTCCT20.2890173410404624No Hit
TAACGCGTACTCCGTTAGTAGAGCTCCATGCTATCCTG20.2890173410404624No Hit
TATCCTGGGTTCCCCGCACTGGCAA20.2890173410404624No Hit
TCCTGGGAAAGAAACAGTTAAGGGAGGACC10.1445086705202312No Hit
TCCTGGGAAAGAAACAGTTAAGGGAGG10.1445086705202312No Hit
CTGGCAAGCACTTATAACAATGGTCAATCGCTAAAAGAACGCTGTGTTGTTCTACCCACTCTTGTTGCTCCTC10.1445086705202312No Hit
TAACAATGGTCAATCGCTAAAAGAACTCC10.1445086705202312No Hit
TCCGTTAGTAGAGCTCCATGCTATCCT10.1445086705202312No Hit
TGTGTTGTTCT10.1445086705202312No Hit
TTGTAACAATGGTCAATCGCTAAAAGAACGCTGTGTTGTTTTACCCACTCTC10.1445086705202312No Hit
CTCCGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGCCCC10.1445086705202312No Hit
TTCTACCCACTCTCGTTGCTCCTCTGGCATAGCC10.1445086705202312No Hit
ACGCTGTGTTGTTCTACCCACTCTCGTTGCTCCT10.1445086705202312No Hit
TACCCACTCTCGTTGCTCCTCTGGCATAGCCCCA10.1445086705202312No Hit
TAGGACGGAGCACATGACCCTGCCAGGCAA10.1445086705202312No Hit
CTCCATGCTATCCTGGGTTCCCCACACTGGCAATCACTTATAACAATGGTCAATCGCTAAAAGAACGCTGTGTT10.1445086705202312No Hit
TTCACATTGTTGCTTGCTTGGTTTGTTCGC10.1445086705202312No Hit
ACGCTGTGTTGTTCTACCCACTCTCGTTGCTCCTCT10.1445086705202312No Hit
TCCATGCTATCCTGGGTTCCCCACAC10.1445086705202312No Hit
TTCTACCCACTCTCGTTGCTCCTCTGGCATAG10.1445086705202312No Hit
TCTAACGCGTACTCCGTTAGTAGAGCTCC10.1445086705202312No Hit
ATAGGACGGAGCACCTGACCCTGCCAGGCAA10.1445086705202312No Hit
TTCTACCCACTCTCGTTGCTCCTCTGG10.1445086705202312No Hit
TCCAAAGAAAGAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGGCAAGTACCTACCTTTA10.1445086705202312No Hit
TCCATGCTATCCTGGGTTCCCCAC10.1445086705202312No Hit
ATGGTCAATCGCTAAAAGAACGCTGTGTTGTTTTACCCACTCTCGTT10.1445086705202312No Hit
TAGGACGGAGCACCCGACCCTGCCAGGCAAG10.1445086705202312No Hit
TACCCACTCTCGTTGCTCCTCTG10.1445086705202312No Hit
TGTGGTGAGAATTGCAACGATAGGTAGGA10.1445086705202312No Hit
ACAGATAGAGAAACTGTGGTGAGACTTGCAACGATAGGTAGGAAATCCTC10.1445086705202312No Hit
GTGGGCTCCTC10.1445086705202312No Hit
TGCACCCTCCCCAAAGTCAGCCAGATTATGT10.1445086705202312No Hit
CATGGATAAATGGAAGACCCCAGAGAAAGCCC10.1445086705202312No Hit
TGCCCACTCTCGTTGCTCCTCTGGCATAGCCCCACA10.1445086705202312No Hit
CACTTGTAACAATTGTCAATCGCTAAAAGAACGCTGTGTTGTTCTACCCACTCTCGTTGCTCCT10.1445086705202312No Hit
TGGTCAATCCCATGCACCCTCCCCAAAGTC10.1445086705202312No Hit
CGCGTACTCCGTTAGTAGAGCTCCATGCTATC10.1445086705202312No Hit
GCTAAAAGAACGCTGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGCC10.1445086705202312No Hit
CATCGTCAAGATCCTGCTCCCATTCACCC10.1445086705202312No Hit
CCCACTCTCGTTGCTCCTC10.1445086705202312No Hit
CGCGTACTCCGTTAGTAGAGCTCC10.1445086705202312No Hit
ACCCACTCTCGTTGCTCCTCTGGCATAGCCCCACAGG10.1445086705202312No Hit
CACTCTCGTTGCTCCTCTGGCATAGCCCCAC10.1445086705202312No Hit
AAGAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGGCAAGTACC10.1445086705202312No Hit
ATCAGAGAACTC10.1445086705202312No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCACA10.1445086705202312No Hit
GATGCGACATA10.1445086705202312No Hit
TTCGCGACATGGACCGAGGACCAAAAGAAAG10.1445086705202312No Hit
TCCGTGTTGTTCTACCCACTCTCGTTGCTCC10.1445086705202312No Hit
TATAACAATGGTCAATCGCTAAAAGAACTCCGTGTTGTTCTACCCACTCT10.1445086705202312No Hit
ATAGGACGGAGCACCTGACCCTGCCAGGCAAG10.1445086705202312No Hit
TTCTAACGCGTACTCCGTTAGTAGAGCTCC10.1445086705202312No Hit
TAAAAGAACGCTGTGTTGTTCTACCTACTCTCGTTGCTCCT10.1445086705202312No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCATT10.1445086705202312No Hit
CTAAACGAGGCT10.1445086705202312No Hit
TCTAACGCGTACTCCGTTAGTAGAGCTCCAT10.1445086705202312No Hit
ATAGGACGGAGCACCTGACCCTGCCAG10.1445086705202312No Hit
AATCGCTAAAAGAACGCTGTGTTGTTCTACCTACTCTCGTTGCTCCTCTGGCATA10.1445086705202312No Hit
TAAAAGAACGCTGTGTTGTTCTACCCACTCTCG10.1445086705202312No Hit
TGGTCAATCGCTAAAAGAACGCTGTGTCG10.1445086705202312No Hit
ATAGGACGGAGCACCTGACCCTGCCA10.1445086705202312No Hit
TAGTTGGAGGAC10.1445086705202312No Hit
TCGTTGCTCCTCTGGCATAGCCCCACAGG10.1445086705202312No Hit
TAGGACGGAGCACCTGACCCTGCCAGGC10.1445086705202312No Hit
TCTGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGC10.1445086705202312No Hit
ATGCACCCTCCCCAAAGTCAGCCAGATTATGTTGGAC10.1445086705202312No Hit
CATCGTCAAGATCCTGCTCCCATTCACCT10.1445086705202312No Hit
CTCATGGATAAATGGAAGACCCCAGAGAAGGCCCATGACACTGATTGTGGTCA10.1445086705202312No Hit
TAGGACGGAGCACCTGACCCTGCCAGGCC10.1445086705202312No Hit
GAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGGCAAGTAC10.1445086705202312No Hit
TACTCCGTTAGTAGAGCTCCATGCTATCC10.1445086705202312No Hit
GAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGGCA10.1445086705202312No Hit
TCCCCACACTGGCAAGCACTTATAACAATGGTCAAT10.1445086705202312No Hit
CACCCATGGACAAACAGAGCTGGAACAAA10.1445086705202312No Hit
TCTACCCACTCTCGTTGCTCCTCTGGCATAGC10.1445086705202312No Hit
ATAGGACGGAGCACCTGACCCTGCCAGGCAAGTACC10.1445086705202312No Hit
CCCACTCTCGTTGCTCCTCTGGCATAGCCCC10.1445086705202312No Hit
GTTCCCCACACTGGCAATCACTTATAACAATGGTCAATCGCTAAA10.1445086705202312No Hit
GAATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCC10.1445086705202312No Hit
GACGAGGTCATCTCGGTATCTGTAAGAGAAGGAGGAAAAGCCAGGAAAATC10.1445086705202312No Hit
TCCATGCTATCCTGGGTTCCCC10.1445086705202312No Hit
AACAATGGTCAATCGCTAAAAGAACTCCGT10.1445086705202312No Hit
TGTGTTGTTCTACCCACTCTCGTTGCTCCA10.1445086705202312No Hit
CTACCCACTCTCGTTGCTCCTCTGGCATAGC10.1445086705202312No Hit
TCTACCCACTCTCGTTGC10.1445086705202312No Hit
TGGACCGAGGACC10.1445086705202312No Hit
CCATTTCCTTTA10.1445086705202312No Hit
ACCCACTCTCGTTGCTCCTCTGGCATAGCCCC10.1445086705202312No Hit
TGTGTTGTTCTACCCACTCTCGTTGCTCCT10.1445086705202312No Hit
TGCACCCTCCCCAAAGTCAGCCAGATTATGTT10.1445086705202312No Hit
TTCTACCCACTCTCGTTGCTCCTCTGGCATAGCCCCA10.1445086705202312No Hit
TAGGACGGAGCACCTGACCCTGCCA10.1445086705202312No Hit
CCACTCTCGTTGCTCCTCTGGCATAGCC10.1445086705202312No Hit
ATAGGACGGAGCACCTGACCCTGCCAGGCAAGT10.1445086705202312No Hit
ACTCTCGTTGCTCCTCTGGCATAGCCCCA10.1445086705202312No Hit
CCCACTCTCGTTGCTCCTCTGGCATAGCCC10.1445086705202312No Hit
AATCGGACTATTGTGTGTTTATACTCAAACCAACGTCCTAGCGACAGAATTTTAC10.1445086705202312No Hit
GGTCAATCGCTAAAAGAACGCTGTGTTGTTCTACCTACTCTCGTTG10.1445086705202312No Hit
GTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGCCCCACA10.1445086705202312No Hit
CGCACTGGCAAGCACTTATAACAATGGTCAATCGCTAAAAGAAC10.1445086705202312No Hit
ATGCAGGAGGAGAAC10.1445086705202312No Hit
CTGCCAGGCAAGTACCTACCTTTTGTTAGT10.1445086705202312No Hit
TAGGACGGAGAACCTGACCCTGCCAGG10.1445086705202312No Hit
TAACAATGGTCAATCGCTAAAAGAACGCTGT10.1445086705202312No Hit
TGTGTTGTTCTACCAACTCTCGTTGCTCC10.1445086705202312No Hit
GACAAAGGCATG10.1445086705202312No Hit
TCCATGCTATCCTGGGTTCCC10.1445086705202312No Hit
AAAAAACGCTGTGTTGTTCTACCCACTCTCGTTGCTCCTCTGGCATAGCCCCACAG10.1445086705202312No Hit
GCTGTGTTGTTCTACCCACTCTCGTTGCTC10.1445086705202312No Hit
AGGACGGAGCACCTGACCCTGCCAGGCAAGTACCTACCTTTTGTTAGTTG10.1445086705202312No Hit
ACAGTTAAGGGAGGACCAC10.1445086705202312No Hit
GTAACAATGGTCAATCGCTAAAAGAACGCTGTGTTGTTCTACCCACTCTC10.1445086705202312No Hit
ATAGGACGGAGCACCTGACCCTGCCAGGCAAGTACCTACCTTTTG10.1445086705202312No Hit
GGTTCCCCGCACTGGCAAGCACTTATAACAATGGTCAATCGCTAAAAGAACGCTGTGTTGTTCTACCTACTCTCG10.1445086705202312No Hit
ACGCGTACTCCGTTAGTAGAGCTCCATGCTATCC10.1445086705202312No Hit
ACTTATAACAATGGTCAATCGCTAAAAGAACTCCGTGTTGTTCTACCCAC10.1445086705202312No Hit
ATAAGTGAAAGTGCAATAGGACGGAGCACCTGACCCTGCCAGGCAAGTACCTACCTTTTGTA10.1445086705202312No Hit
GTAGAGCTCCATGCTATCCTGGGTTCCCCACACTGGCAATCACTTATAACAATGGTCAATCGCTAAAA10.1445086705202312No Hit
TGAGGAACTAGGAGTTCACCCAGACATCGGGCC10.1445086705202312No Hit
CGCACTGGCAAGCACTTATAACAATGGTCAATCGCTAAAAGAACT10.1445086705202312No Hit
TCAATCGCTAAAAGAACGCTGTGTTGTTTT10.1445086705202312No Hit

[OK]Adapter Content

Adapter graph