FastQCFastQC Report
Mon 16 Nov 2020
S33.raw.16656.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS33.raw.16656.reverse-mapped.fq.gz
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences5
Sequences flagged as poor quality0
Sequence length12-75
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTATTTTTATT120.0No Hit
TACTAACTGATAGTCTGCAAGATGCTGGAGCATACATGGAGATTATACCGATCTCAAGAGAGGAATGCAGGACAC120.0No Hit
TCCTCCAAATGAGATTAAAGACGACCCCTCT120.0No Hit
TCTGGACTCCCACCCTTCCAGAATGTGAAGGA120.0No Hit
AACCCCGGCTTG120.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)