FastQCFastQC Report
Mon 16 Nov 2020
S34.raw.1532.forward-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.raw.1532.forward-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2933
Sequences flagged as poor quality0
Sequence length11-76
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAGGTAGCTCGGGTGGTAAGGCGCGGC2468.387316740538697No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGG1585.3869757927037165No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCT1023.4776679168087283No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCT632.1479713603818613No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCG431.4660756904193657No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCGGC411.3978861234231164No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCGG351.1933174224343674No Hit
TAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC321.0910330719399932No Hit
TCGGGTGGTAAGGCGCGGCTTGGTAACC250.8523695874531197No Hit
CTCGGGTGGTAAGGCGCGGCTTGGTAACC220.7500852369587453No Hit
TTACAAAGTACGGGACGGGCAGCTTGTT220.7500852369587453No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCGGCT210.7159904534606205No Hit
TGCAGGTAGCTAGGGTGGTAAGGCGCGGC210.7159904534606205No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC170.5796113194681214No Hit
TCACGGGTTCGAACCCCGCACCGGGCT170.5796113194681214No Hit
CACGGGTTCGAACCCCGCACCGGGC170.5796113194681214No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGC160.5455165359699966No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGC140.47732696897374705No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT140.47732696897374705No Hit
GTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT140.47732696897374705No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGG140.47732696897374705No Hit
CACGGGTTCGAACCCCGCACCGGGCTAC140.47732696897374705No Hit
TGTAGGTAGCTCGGGTGGTAAGGCG140.47732696897374705No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT130.4432321854756222No Hit
AGATGTGTAGGTAGCTCGGGTGGTAAGGCGCGG130.4432321854756222No Hit
CACGGGTTCGAACCCCGCACCGGGCT130.4432321854756222No Hit
GTAGGTAGCTCGGGTGGTAAGGCGCGGCT130.4432321854756222No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTA130.4432321854756222No Hit
TAAGGCGCGGCTTGGTAACCC130.4432321854756222No Hit
TCATGAGCTCTAGGATACCTACTCCAAGT120.40913740197749743No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC120.40913740197749743No Hit
AGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC120.40913740197749743No Hit
GTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC110.37504261847937265No Hit
TAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC110.37504261847937265No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCG110.37504261847937265No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGC110.37504261847937265No Hit
GTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC100.34094783498124787No Hit
GGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT100.34094783498124787No Hit
AGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC100.34094783498124787No Hit
TCACGGGTTCGAACCCCGCACCGGGCTACTT90.3068530514831231No Hit
TAAGGCGCGGCTTGGTAACCCTAAGGTCAC90.3068530514831231No Hit
TGTAGGTAGCTCGGGTGGTAA90.3068530514831231No Hit
CACGGGTTCGAACCCCGCACCGGGCTACT90.3068530514831231No Hit
AGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT90.3068530514831231No Hit
TCACGGGTTCGAACCCCGCACCGGGC90.3068530514831231No Hit
AGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC80.2727582679849983No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCACACC80.2727582679849983No Hit
GGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC80.2727582679849983No Hit
TATGTAGCTCGGGTGGTAAGGCGCGGCT80.2727582679849983No Hit
TGTAGGTAGCTCGGGTGGTAAGG70.23866348448687352No Hit
TCACGGGTTCGAACCCCGCACCGGGCTAC70.23866348448687352No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTT70.23866348448687352No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT70.23866348448687352No Hit
CAGGTAGCTCGGGTGGTAAGGCGCGGCT70.23866348448687352No Hit
CGTTACAAAGTACGGGACGGGCAGCTTG70.23866348448687352No Hit
TCACGGGTTCGAACCCCGCACCGGGCTACT70.23866348448687352No Hit
TCGGGTGGTAAGGCGCGGCTTGGTAACCC70.23866348448687352No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGT70.23866348448687352No Hit
TCAGATGAGACAGCGGGAAAGGTACAAGT70.23866348448687352No Hit
CGCACCGGGCT70.23866348448687352No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAAC60.20456870098874871No Hit
TACAAGCTGCCCGTCCCGTACTTTGTAACG60.20456870098874871No Hit
GGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGT60.20456870098874871No Hit
TAGCTCGGGTGGTAAGGCGCGGCTTGGTA60.20456870098874871No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCA60.20456870098874871No Hit
TAAGGCGCGGCTTGGTAACCCTAAGGTACG60.20456870098874871No Hit
AGCTCGGGTGGTAAGGCGCGGCTTGGTAACC60.20456870098874871No Hit
CAAAGTACGGGACGGGCAGCTT60.20456870098874871No Hit
TACAGATGTGCAGGTAGCTAGGGTGGTA60.20456870098874871No Hit
TGCAGGTAGCTAGGGTGGTAAGGCGC60.20456870098874871No Hit
CAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC60.20456870098874871No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC60.20456870098874871No Hit
CGCACCGGGCTACTTTTT50.17047391749062393No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTG50.17047391749062393No Hit
GGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC50.17047391749062393No Hit
CGTTACAAAGTACGGGACGGGCAGCTT50.17047391749062393No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAAC50.17047391749062393No Hit
TGCAGGTAGCTAGGGTGGTAAGGCGCGG50.17047391749062393No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCGGT50.17047391749062393No Hit
TAGGTAGCTCGGGTGGTAAGGC50.17047391749062393No Hit
CGTTACAAAGTACGGGACGGGCAG50.17047391749062393No Hit
GTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC50.17047391749062393No Hit
GTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTA50.17047391749062393No Hit
ACGGGTTCGAACCCCGCACCGGGCTACTT50.17047391749062393No Hit
TGTAGCTCGGGTGGTAAGGCGCGGCTTGG50.17047391749062393No Hit
TATGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC50.17047391749062393No Hit
TGTAGGTAGCTCGGGTGGTAAG50.17047391749062393No Hit
TCCTTGCCCGAACCCAGGAAAATTGTCAAAAC50.17047391749062393No Hit
GATGTGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGT50.17047391749062393No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGG50.17047391749062393No Hit
CGCACCGGGCTACT50.17047391749062393No Hit
GATGTGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCA50.17047391749062393No Hit
GTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC50.17047391749062393No Hit
TAGGTAGCTCGGGTGGTAAGGCG50.17047391749062393No Hit
GTAGGTAGCTCGGGTGGTAAGGCGCGGC50.17047391749062393No Hit
TCGGGTGGTAAGGCGCGGCTTGGTA40.13637913399249915No Hit
CACGGGTTCGAACCCCGCACCGGGCTACTT40.13637913399249915No Hit
TGAAGGTAGCTCGGGTGGTAAGGCGCGGC40.13637913399249915No Hit
TAGCTCGGGTGGTAAGGCACGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCC40.13637913399249915No Hit
GAGGTTTGACGC40.13637913399249915No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCGGA40.13637913399249915No Hit
CAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC40.13637913399249915No Hit
TGCAGGTAGCTCGGGTGGTAAGGCG40.13637913399249915No Hit
CAAGTATCAGCACAGTATTTTGGCCAGCAACTC40.13637913399249915No Hit
GCACAGTATTTTGGCCAGCAACTC40.13637913399249915No Hit
CCCCGCACCGGGCT40.13637913399249915No Hit
ACGGGTTCGAACCCCGCACCGGGCTACT40.13637913399249915No Hit
GCTCGGGTGGTAAGGCGCGGCTTGGTAACC40.13637913399249915No Hit
GATGTGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTA40.13637913399249915No Hit
AGATGTGTAGGTAGCTCGGGTGGTAAGGCGCGGCT40.13637913399249915No Hit
CAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT40.13637913399249915No Hit
GATATGCAGGTAGCTAGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCACCGGGCT40.13637913399249915No Hit
TACAGGTAGCTCGGGTGGTAAGGCGCGG40.13637913399249915No Hit
GTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT40.13637913399249915No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCAC40.13637913399249915No Hit
TCGGGTGGTAGGGCGCGGCTTGGTAACCC40.13637913399249915No Hit
CTCGGGTGGTAAGGCGCGGCT40.13637913399249915No Hit
TAACCCTAAGGTCACGGGTTCGAACCC40.13637913399249915No Hit
TTCAGATGAGACAGCGGGAAAGGTACAAGT40.13637913399249915No Hit
TGGTAAGGCGCGGCTTGGTAACCCTAAGGT40.13637913399249915No Hit
GTAAGGCGCGGCTTGGTAACCCT40.13637913399249915No Hit
GATGTGCATGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGG40.13637913399249915No Hit
TGTAGCTCGGGTGGTAAGGCGCGGCTTGGTC40.13637913399249915No Hit
GTGCAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCACCGGTC40.13637913399249915No Hit
ACGGGTTCGAACCCCGCACCGGGCTAC40.13637913399249915No Hit
GTAGGTAGCTCGGGTGGTAAGGCGC40.13637913399249915No Hit
GGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACG40.13637913399249915No Hit
TCACTTTCGATTTCTTTCCCGTGCTCCGT40.13637913399249915No Hit
TCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACG40.13637913399249915No Hit
TGTTTGAGGCAAACGGTAGGAGATAGCGC30.10228435049437436No Hit
TACAGATGTGTAGGTAGCTCGGGTGGTA30.10228435049437436No Hit
ATGTGCAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCACCGGG30.10228435049437436No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTA30.10228435049437436No Hit
ATGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC30.10228435049437436No Hit
TGCAGGTAGCTCGGGTGGTAAGGCGCGGCTAAA30.10228435049437436No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCA30.10228435049437436No Hit
CCGTTACAAAGTACGGGACGGGCAGCTT30.10228435049437436No Hit
GATGTGCAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCG30.10228435049437436No Hit
TATGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACG30.10228435049437436No Hit
GGTAAGGCGCGGCT30.10228435049437436No Hit
GATGTGCAGGTAGCTCGGGTGGTAAGGC30.10228435049437436No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACG30.10228435049437436No Hit
AGCACAGTATTTTGGCCAGCAACTC30.10228435049437436No Hit
TATGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCT30.10228435049437436No Hit
TAACCCTAAGGTCACGGGTTCGAACCCCGC30.10228435049437436No Hit
CACCGGGCTACTTTTT30.10228435049437436No Hit
AGGCGCGGCTTGGTAACCCTAAG30.10228435049437436No Hit
TAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCA30.10228435049437436No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGT30.10228435049437436No Hit
CGGGAAAGGATTACAGATGTGCAGGTAGCTCGGGTGGTAA30.10228435049437436No Hit
CCGCACCGGGCTACTTTT30.10228435049437436No Hit
GATGTGCAGGTAGCTAGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCT30.10228435049437436No Hit
TACCAAGCCGCGCCTTACCACCCTAG30.10228435049437436No Hit
AGTACGGGACGGGCAGCTTGT30.10228435049437436No Hit
GTAAGGCGCGGCTTGGTAAC30.10228435049437436No Hit
AGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAG30.10228435049437436No Hit
TCCGGACATTGTTTGAGGCGAACGGTAGG30.10228435049437436No Hit
AAGGCGCGGCTTGGTAACCC30.10228435049437436No Hit
AAGCTGCCCGTCCCGTACTCTGTAACGGA30.10228435049437436No Hit
GATATGCAGGTAGCTAGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGG30.10228435049437436No Hit
CTCGGGTGGTAAGGCGCGGCTTGGTAAC30.10228435049437436No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACC30.10228435049437436No Hit
GTAGGTAGCTCGGGTGGTAAGGCGCGG30.10228435049437436No Hit
TAGTGTGGTAAGGCGCGGCTTGGTAACCC30.10228435049437436No Hit
GATGTGCAGGTAGCTAGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCG30.10228435049437436No Hit
GTCACGGGTTCGAACCCCGCACCGGGC30.10228435049437436No Hit
TTTGGCAGTTGGAAATGTAACGTCTGATTTGGACTCA30.10228435049437436No Hit
TACAAAGTACGGGACGGGCAGCTTGTGTT30.10228435049437436No Hit
TGCAGGTAGCTCTGGTGGTAAGGCGCGGC30.10228435049437436No Hit
CCCGCACCGGGCT30.10228435049437436No Hit
TGTGCAGGTAGCTCGGGTGGTAAGGCGCG30.10228435049437436No Hit
GCAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC30.10228435049437436No Hit
TGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCACCGGG30.10228435049437436No Hit
GATGTGCAGGTAGCTCGGG30.10228435049437436No Hit
TAAGGCGCGGCTTGGTAACCCTAAGGTACGG30.10228435049437436No Hit
AAGCTGCCCGTCCCGTACTTTGTAACG30.10228435049437436No Hit
ATTGTTTGAGGCAAACGGTAGGAGATAGCGCAAAATGGAAGAGGACAAACC30.10228435049437436No Hit
TGCAGGTAGCTCAGGTGGTAAGGCGCG30.10228435049437436No Hit
GCAGGTAGCTCGGGTGGTAAGGCGCGGC30.10228435049437436No Hit
GTAGCTCGGGTGGTAAGGCGCGGCT30.10228435049437436No Hit
TGAAGGTAGCTCGGGTGGTAAGGCGCG30.10228435049437436No Hit
GATGTGCAGGTAGCTCTGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCACCGAGC30.10228435049437436No Hit
CCGCACCGGGCTACT30.10228435049437436No Hit
ACGAGCTGCCCGTCCCGTACTTTGTAAC30.10228435049437436No Hit
AATAGTGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCAC30.10228435049437436No Hit
GATATGCAGGTAGCTAGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCACCGGGC30.10228435049437436No Hit
CGCACCGGGCTAC30.10228435049437436No Hit
TCGGGTGGTAAGGCGCGGCTTGGTAACCCT30.10228435049437436No Hit
TAAGGCGCGGCTT30.10228435049437436No Hit
AGGCGCGGCTTGGTAAC30.10228435049437436No Hit
TCGGGTGGTAATGCGCGGCTTGGTAACCC30.10228435049437436No Hit
TTCATGAGCTCTAGGATACCTACTCCCAGT30.10228435049437436No Hit
AAGGCGCGGCTTGGTAACGCTAAGGTCACGGGTTCGAACCCCGCACCGGGC30.10228435049437436No Hit
GGTAAGGCGCGGCTTGGTAAC30.10228435049437436No Hit
ATGTGCAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACCGGTTCGA30.10228435049437436No Hit
CAGGTAGCTCAGGTGGTAAGGCGCGGC30.10228435049437436No Hit
TCCGGACATTGTTTGAGGCGAACGGTAG30.10228435049437436No Hit
CCGCACCGGGCTACTTTTT30.10228435049437436No Hit
ATGCAGGTAGCTAGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCG30.10228435049437436No Hit
GATGTGCAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCCTAAGGTCACGGGTTCGAACCCCGCACCGGGC30.10228435049437436No Hit
TGTAGGTAGCTCGGGTGGTAAGGCGCGGCTT30.10228435049437436No Hit
ACAAGCTGCCCGTCCCG30.10228435049437436No Hit
TTAAACTGAACTACTTTACTGCTGGATTACAGATGTGCAGGTAGCTCGGG30.10228435049437436No Hit
GCAGGTAGCTCGGGTGGTAAGGCGCGGCT30.10228435049437436No Hit
AGATGTGTAGGTAGCTCGGGTGGTAAGGCGCGGCTTGGTAACCC30.10228435049437436No Hit
TGTAGGTAGCTCGGGTGGTAAGGC30.10228435049437436No Hit

[OK]Adapter Content

Adapter graph