FastQCFastQC Report
Mon 16 Nov 2020
S34.raw.2812.reverse-mapped.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS34.raw.2812.reverse-mapped.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2977
Sequences flagged as poor quality0
Sequence length11-76
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCCCGTCTGCGCACTGGATGAAACCGT1765.911991938192811No Hit
TTCTTGAAGTCCCGAGTTATCGCTTTCTG1484.971447766207591No Hit
TCCCGAGTTATCGCTTTCTGTAATTGTCTC802.6872690628149143No Hit
TTGGCGGTTTGCTGGTAGATATGGGCACATC652.1834061135371177No Hit
TACTTAATTGTGAACTCATGCCGGGGAA652.1834061135371177No Hit
TAACTCTTCGTCCGACTCGACATCCATA591.9818609338259994No Hit
TGCTTCCAGTAGACTTCCTTCGGTTGACCT571.9146792072556267No Hit
TCCATAATTGGCGGTTTGCTGGTAGATA521.7467248908296942No Hit
TCTTGAAGTCCCGAGTTATCGCTTTCTG511.7131340275445077No Hit
TTCAACGGCGCAGCAGGGTGGTTCCGAAC491.645952300974135No Hit
TTGGCGGTTTGCTGGTAGATATGGGCACA461.5451797111185759No Hit
TCGTGTATAACGTGGACGTGGTCGTGGT371.2428619415518978No Hit
TCGTGTATAACGTGGACGTGGTCGTGGTG361.2092710782667115No Hit
TAGATATGGGCACATCTGCACTGGTTGGAT351.175680214981525No Hit
TGCCCATCTCGCCTTTCTTGAAGTCCCGAGT331.1084984884111522No Hit
TGCCCATCTCGCCTTTCTTGAAGTCCCGAG311.0413167618407793No Hit
TCCTCCCATACTTGCGCTTGCTGATCGGG270.9069533087000335No Hit
TACTTAATTGTGAACTCATGCCGGGGAAT260.8733624454148471No Hit
TCCGGGCACAGTTTCTTCACAGGGGACGTC250.8397715821296607No Hit
TGCCCCGTCTGCGCACTGGATGAAACCG240.8061807188444743No Hit
TCATCTCCAGATTCGCATGCTGACGCGAC230.7725898555592879No Hit
TGCTTGCTTCCAGTAGACTTCCTTCGGT230.7725898555592879No Hit
TGCCCCGTCTGCGCACTGGATGAAACC230.7725898555592879No Hit
TAATTGGCGGTTTGCTGGTAGATATGGGC220.7389989922741014No Hit
TTTGCTGGTAGATATGGGCACATCTGCACTG220.7389989922741014No Hit
TGCTGATCGGGAGTCAAATGCACTTGCACT200.6718172657037286No Hit
TATGGGCACATCTGCACTGGTTGGATT190.6382264024185421No Hit
TCTCCATAATCCATTAGTGACCAAGCCGCC190.6382264024185421No Hit
TTCTGTAATTGTCTCAACAGTTGCCCCGTC180.6046355391333558No Hit
TTCACAGGGGCCGTCGGTCTGGGACACTC170.5710446758481693No Hit
TGCTGGTAGATATGGGCACATCTGCACT160.5374538125629829No Hit
TTGCCCCGTCTGCGCACTGGATGAAACCG160.5374538125629829No Hit
TGACCAAGCCGCCAATTCAATTGCTCTGTT160.5374538125629829No Hit
TTGCCCCGTCTGCGCACTGGATGAAACCGT150.5038629492777964No Hit
TGAAGTCCCGAGTTATCGCTTTCTGTAATT140.47027208599261006No Hit
TATGGGCACATCTGCACTGGTTGGATTG130.43668122270742354No Hit
TGAAATATGAGTTTCAACGGCGCAGCAGGG130.43668122270742354No Hit
TTGGCGGTTTGCTGGTAGATATGGGCACAT130.43668122270742354No Hit
TGTCTCAACAGTTGCCCCGTCTGCGCACT130.43668122270742354No Hit
TCTGTAATTGTCTCAACAGTTGCCCCGTC130.43668122270742354No Hit
TAGTAATTGTTCTCCCGTATTTCTGGGGC120.40309035942223714No Hit
TTGGCGGTTTGCTGGTAGATATGGGCAC120.40309035942223714No Hit
TGCTTGCTTCCAGTAGACTTCCTTCGGTT110.3694994961370507No Hit
TCACAGGGGCCGTCGGTCTGGGACACTC110.3694994961370507No Hit
TCCGGGCACAGTTTCTTCACAGGGGCCGTC110.3694994961370507No Hit
TCGTCCGACTCGACATCCATAATTGGCGGT110.3694994961370507No Hit
TTCGTCCGACTCGACATCCATAATTGGCGGT100.3359086328518643No Hit
TTCGAGCTTCATTACCAAATCGTGGGAT100.3359086328518643No Hit
TGCTTCCAGTAGACTTCCTTCGGTTGACC100.3359086328518643No Hit
TGCCCATCTCGCCTTTCTTGAAGTCCCGA100.3359086328518643No Hit
TCGACATCCATAATTGGCGGTTTGCTGGT100.3359086328518643No Hit
TGCTGGTAGATATGGGCACATCTGCACTG90.3023177695666779No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTGA90.3023177695666779No Hit
TCGGAAGAAGAGCATCCCATACTTGTTGAGT90.3023177695666779No Hit
TATGAGCTTCAACGGCGCAGCAGGGTGG90.3023177695666779No Hit
TCATCTCCAGATTCGCATGCTGACGCGACC90.3023177695666779No Hit
TTCGAGCTTCATTACCAAATCGTGGGATC90.3023177695666779No Hit
TATGGGCACATCTGCACTGGTTGGATTGAT90.3023177695666779No Hit
TCTACTTGCCTGCCTATTTTAGCCCCACA90.3023177695666779No Hit
TTTGCTGGTAGATATGGGCACATCTGCACT80.26872690628149143No Hit
TCACAGGGGACGTCGGTCTGGGACACTC80.26872690628149143No Hit
TTGTAGATCGTCTGGAACTTGGTAAGAGA80.26872690628149143No Hit
TCTTCACAGGGGACGTCGGTCTGGGACACT80.26872690628149143No Hit
TAAGTCTTCGTCCGACTCGACATCCATA80.26872690628149143No Hit
TTGTCTCAACAGTTGCCCCGTCTGCGCAC80.26872690628149143No Hit
TTCCTCCCATACTTGCGCTTGCTGATCGG80.26872690628149143No Hit
TGCTGGTAGATATGGGCACATCTGCACTGG80.26872690628149143No Hit
TCTTCACAGGGGACGTCGGTCTGGGACACTC80.26872690628149143No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTG80.26872690628149143No Hit
TCCGAACGAACTCGAGTAATTGTTCTCCCG70.23513604299630503No Hit
TGCGCTTGCTGATCGGGAGTCAAATGCACT70.23513604299630503No Hit
TCTCAACAGTTGCCCCGTCTGCGCACTGG70.23513604299630503No Hit
TTGTCTCAACAGTTGCCCCGTCTGCGCACT70.23513604299630503No Hit
TCGACATCCATAATTGGCGGTTTGCTGGTA70.23513604299630503No Hit
TAGATATGGGCACATCTGCACTGGTTGGA70.23513604299630503No Hit
TCTTCACAGGGGCCGTCGGTCTGGGACACTC70.23513604299630503No Hit
TCCGGGCACAGTTTCTTCACAGGGGACG70.23513604299630503No Hit
TAGTGACCAAGCCGCCAATTCAAT70.23513604299630503No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTT70.23513604299630503No Hit
ACTGCCCATCTCGCCTTTCTTGAAGTCCCG60.20154517971111857No Hit
TATCGCTTTCTGTAATTGTCTCAACAGTT60.20154517971111857No Hit
TATATTGTTGTAGATCGTCTGGAACTTGGT60.20154517971111857No Hit
TCCTTCGGTTGACCTACACATTTCGAGTA60.20154517971111857No Hit
TGAAATAGTGGGGGCAGCAGACCTATAGTCACGCCAGT60.20154517971111857No Hit
TTCATCTCCAGATTCGCATGCTGACGCGAC60.20154517971111857No Hit
TCTTGAAGTCCCGAGTTATCGCTTTCTGT60.20154517971111857No Hit
TCGGTCTGGGACACTCTTGGAAGGTCAGC60.20154517971111857No Hit
TACTTAATTGTGAATTCATGCCGGGGAA60.20154517971111857No Hit
TCCAAGTTGCTTGCTTCCAGTAGACTTCCT60.20154517971111857No Hit
TTGGCGGTTTGCTGGTAGATATGGGCACT60.20154517971111857No Hit
TGTCTCAACAGTTGCCCCGTCTGCGCACTG60.20154517971111857No Hit
TGCCCATCTCGCCTTTCTTGAAGTCCCG60.20154517971111857No Hit
TGAAATATGAGCTTCAACGGCGCAGCAGGG60.20154517971111857No Hit
TCCGGGCACAGTTTCTTCACAGGGGCCGT60.20154517971111857No Hit
TGTTGTAGATCGTCTGGAACTTGGTAAGA60.20154517971111857No Hit
TTCTTCACAGGGGCCGTCGGTCTGGGACA60.20154517971111857No Hit
TGTTCCTCCCATACTTGCGCTTGCTGATCGG50.16795431642593214No Hit
TCTGCACTGGTTGGATTGATAGGAACAGTC50.16795431642593214No Hit
TAGTGGGGGCAGCAGACCTATAGTCACGC50.16795431642593214No Hit
TCTCCATAATCCATTAGTGACCAAGCCGCCT50.16795431642593214No Hit
TCTTCACAGGGGCCGTCGGTCTGGGACACT50.16795431642593214No Hit
TATTGTTGTAGATCGTCTGGAACTTGGT50.16795431642593214No Hit
TTCGAGCTTCATTACCAAATCGTGGGATCGA50.16795431642593214No Hit
TAATTGTCTCAACAGTTGCCCCGTCTGC50.16795431642593214No Hit
TATAACGTGGACGTGGTCGTGGTGTTCTG50.16795431642593214No Hit
TGAAAAGCCATGAAGGACCAATTGGTATAGT50.16795431642593214No Hit
TATTGACCCAACTAGACTAGTAGAACTATT50.16795431642593214No Hit
TCCCGAGTTATCGCTTTCTGTAATTGTCTCAAC50.16795431642593214No Hit
TCACAGGGGCCGTCGGTCTGGGACACTCT50.16795431642593214No Hit
TCCTTCGGTTGACCTACACATTTCGAGTAA50.16795431642593214No Hit
TCCTTCGGTTGACCTACACATTTCGAGT50.16795431642593214No Hit
CTTCCTTCGGTTGACCTACACATTTCGAGTA50.16795431642593214No Hit
TGGGCACATCTGCACTGGTTGGATTGATAG50.16795431642593214No Hit
TACAGTTTGAAGAATTCTAGCACCACAAT50.16795431642593214No Hit
TGTTGTAGATCGTCTGGAACTTGGTAAGAG50.16795431642593214No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTC50.16795431642593214No Hit
TACTTGCGCTTGCTGATCGGGAGTCAAAT40.13436345314074571No Hit
TATAACGTGGACGTGGTCGTGGTGTTCTGC40.13436345314074571No Hit
TCTTCGTCCGACTCGACATCCATAATTGGC40.13436345314074571No Hit
TCCGAACGAACTCGAGTAATTGTTCTCCC40.13436345314074571No Hit
TAGGAACAGTCGTGTATAACGTGGACGTG40.13436345314074571No Hit
TAGATATGGGCACATCTGCACTGGTTGG40.13436345314074571No Hit
TGCTCGATGAAATAGTGGGGGCAGCAGACCT40.13436345314074571No Hit
TTCCTCTTCGCCTTCTTCATTAGAGG40.13436345314074571No Hit
ACTGCCCATCTCGCCTTTCTTGAAGTCCCGA40.13436345314074571No Hit
TTGCTGGTAGATATGGGCACATCTGCACT40.13436345314074571No Hit
TTCGGCCCATAGCATTGACATTTTCTTCATC40.13436345314074571No Hit
TTTGCTGGTAGATATGGGCACATCTGCAC40.13436345314074571No Hit
TTCTCCGGGCACAGTTTCTTCACAGGGGCC40.13436345314074571No Hit
TAATTGGCGGTTTGCTGGTAGATATGGGCACA40.13436345314074571No Hit
TTAAACTGCCCATCTCGCCTTTCTTGAAG40.13436345314074571No Hit
TTCACAGGGGACGTCGGTCTGGGACACTC40.13436345314074571No Hit
TCCGAACGAACTCGAGTAATTGTTCTCCCGT40.13436345314074571No Hit
TAAACTGCCCATCTCGCCTTTCTTGAAGT40.13436345314074571No Hit
TCGCTTTCTGTAATTGTCTCAACAGTT40.13436345314074571No Hit
TGGTTGGATTGATAGGAACAGTCGTGTAT40.13436345314074571No Hit
TCGTGTATAACGTGGATGTGGTCGTGGT40.13436345314074571No Hit
TACTTAATTGTGAACTCATGCCGGGGA40.13436345314074571No Hit
ATACTTAATTGTGAACTCATGCCGGGGAA40.13436345314074571No Hit
CTCGACATCCATAATTGGCGGTTTGCTGGT40.13436345314074571No Hit
CCCCGTCTGCGCACTGGATGAAACCGT40.13436345314074571No Hit
TTGTGAACTCATGCCGGGGAATAACTCTTC40.13436345314074571No Hit
CTGTAATTGTCTCAACAGTTGCCCCGTCTGCGCACTGGATG40.13436345314074571No Hit
TTCTGAAATTGTCTCAACAGTTGCCCCGTC40.13436345314074571No Hit
TGAGTACAGTTTGAAGAATTCTAGCACCAC40.13436345314074571No Hit
TCCATAATCCATTAGTGACCAAGCCGCCAAT40.13436345314074571No Hit
TGTAGATCGTCTGGAACTTGGTAAGAGAT40.13436345314074571No Hit
TCGCATGCTGACGCGACCACGCTGCTGC40.13436345314074571No Hit
AGTTTGAAGAATTCTAGCACCACGATGAA40.13436345314074571No Hit
TACTTAATTGTGAATTCATGCCGGGGAAT30.10077258985555929No Hit
TTGGATTGATAGGAACAGTCGTGTATAACGT30.10077258985555929No Hit
CTCGACATCCATAATTGGCGGTTTGCTG30.10077258985555929No Hit
CATACTTAATTGTGAATTCATGCCGGGG30.10077258985555929No Hit
TCCGGGCACAGTTTCTTCACAGGGGACGT30.10077258985555929No Hit
CGGGCACAGTTTCTTCACAGGGGCCGTCGGTCTGGGACACTCTTGGAAGG30.10077258985555929No Hit
TTGACGGCATACTTAATTGTGAACTCATGC30.10077258985555929No Hit
TCAACGGCGCAGCAGGGTGGTTCCGAACGA30.10077258985555929No Hit
TAGTGGGGGCAGCAGACCTATAGTCACGCC30.10077258985555929No Hit
TTCACAGGGGCCGTCGGTCTGGGACACTCTT30.10077258985555929No Hit
TATGTATTTGATGCGCTATTTCGGCCCAT30.10077258985555929No Hit
TAACTCTTCGTCCGACTCGACATCCAT30.10077258985555929No Hit
TGCGTAGTAATCTCCATAATCCATTAGTG30.10077258985555929No Hit
TCCATAATCCATTAGTGACCAAGCCGCCAA30.10077258985555929No Hit
TGTTGAGTACAGTTTGAAGAATTCTAGCAC30.10077258985555929No Hit
TTCCAGTAGACTTCCTTCGGTTGACCTA30.10077258985555929No Hit
TGCTCGATGAAATAGTGGGGGCAGCAGACC30.10077258985555929No Hit
TTGCTTCCAGTAGACTTCCTTCGGTTGACT30.10077258985555929No Hit
TGGTAGATATGGGCACATCTGCACTGGTT30.10077258985555929No Hit
TCTTGGTCCTTTTTCCAAATAGAGCACGG30.10077258985555929No Hit
TGAAACCGTGCACAATGTCTTCCAAGTTGC30.10077258985555929No Hit
TCTGCACTGGTTGGATTGATAGGAACAGT30.10077258985555929No Hit
TGCCCCGTCTGCGCACTGGA30.10077258985555929No Hit
TGCGCTTGCTGATCGGGAGTCAAATGC30.10077258985555929No Hit
TTCTTCACAGGGGCCGTCGGTCTGGGAC30.10077258985555929No Hit
TCCGAACGAACTCTAGTAATTGTTCTCCCG30.10077258985555929No Hit
TCGTGTATAACGTGGACGTGGTCGTGG30.10077258985555929No Hit
TTTGCTGGTAGATATGGGCACATCTGCACTGC30.10077258985555929No Hit
TCTGGGACACTCTTGGAAGGTCAGCTTCCT30.10077258985555929No Hit
TCACAGGGGCCGTCGGTCTGGGACACTCTT30.10077258985555929No Hit
TAATTGTGAACTCATGCCGGGGAATAACT30.10077258985555929No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTGCATT30.10077258985555929No Hit
TTAGTGACCAAGCCGCCAATTCAATTGCTCT30.10077258985555929No Hit
TCCATAATTGGCGGTTTGCTGGTAGATATG30.10077258985555929No Hit
TTCAACGGCGCAGCAGGGTGGTTCCGAACT30.10077258985555929No Hit
TGGTCCAGTGAGGCGTTTGAAATATGAG30.10077258985555929No Hit
TTAATTGTGAACTCATGCCGGGGAATAAC30.10077258985555929No Hit
TAATGATATTGACCCAACTAGACTAGTAGA30.10077258985555929No Hit
CTCGACATCCATAATTGGCGGTTTGCTGGTA30.10077258985555929No Hit
TGACATTTTCTTCATCTCCAGATTCGCAT30.10077258985555929No Hit
TTGGTATAGTCGGCTTCTTTCATAATTAT30.10077258985555929No Hit
TGTCTCAACAGTTGCCCCGTCTGCGCAC30.10077258985555929No Hit
TGTAGATCGTCTGGAACTTGGTAAGAG30.10077258985555929No Hit
TGCTGATCGGGAGTCAAATGCACTTGCACTT30.10077258985555929No Hit
TCCAGATTCGCATGCTGACGCGACCACGC30.10077258985555929No Hit
TCCATTAGTGACCAAGCCGCCAATTCAAT30.10077258985555929No Hit
AGTTTCTTCACAGGGGACGTCGGTCTGG30.10077258985555929No Hit
TTCATCTCCAGATTCGCATGCTGACGCGACC30.10077258985555929No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTTT30.10077258985555929No Hit
TTCTTCACAGGGGCCGTCGGTCTGGGACAC30.10077258985555929No Hit
TTCTTCACAGGGGCCGTCGGTCTGGG30.10077258985555929No Hit
TTGGTCCAGTGAGGCGTTTGAAATATGAGC30.10077258985555929No Hit
TGGTGTTCTGCGATGACGGTAAATGCGT30.10077258985555929No Hit
TGTATAACGTGGACGTGGTCGTGGTGTT30.10077258985555929No Hit
TTAATTGTGAACTCATGCCGGGGAATAACT30.10077258985555929No Hit
TGAGTACAGTTTGAAGAATTCTAGCACCA30.10077258985555929No Hit
TAATTGGCGGTTTGCTGGTAGATATGGG30.10077258985555929No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTGAA30.10077258985555929No Hit
TCAAATGCACTTGCACTTTGGCTCCGGAT30.10077258985555929No Hit
CCGGGGAATAACTCTTCGTCCGACTCGACA30.10077258985555929No Hit
TACTTAATTGTGAATTCATGCCGGGGA30.10077258985555929No Hit
TAAACTGCCCATCTCGCCTTTCTTGAAGTC30.10077258985555929No Hit
TCGGAAGAAGAGCATCCCATACTTGTTGAGTATTCGG30.10077258985555929No Hit
TGTAAAACGTTTGCTTTGACAGGTATCCT30.10077258985555929No Hit
ACAGTTTGAAGAATTCTAGCACCACGATG30.10077258985555929No Hit
TTAAACTGCCCATCTCGCCTTTCTTGAAGT30.10077258985555929No Hit
TTCGCATGCTGACGCGACCACGCTGCTGC30.10077258985555929No Hit
TTGTTGTAGATCGTCTGGAACTTGGTAAG30.10077258985555929No Hit
TTAGTGACCAAGCCGCCAATTCAATTGCTC30.10077258985555929No Hit
TTTTCTTCATCTCCAGATTCGCATGCTGAC30.10077258985555929No Hit
TGCCCCGTCTGCGCACTGGATGAAACCGTGCACC30.10077258985555929No Hit
TCGTGTATAACGTGGACGTGGTCG30.10077258985555929No Hit
AATCAAAACGATTA30.10077258985555929No Hit
TCTCCATAATCCATTAGTGACCAAGCCGCCAAT30.10077258985555929No Hit

[OK]Adapter Content

Adapter graph