All statistics are based on contigs of size >= 3000 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). Assembly MaSuRCA MaSuRCA_broken canu-erate-0.085 canu-erate-0.150 # contigs (>= 0 bp) 15836 15901 28975 25107 # contigs (>= 1000 bp) 15836 15901 28975 25107 # contigs (>= 5000 bp) 15740 15811 23703 21187 # contigs (>= 10000 bp) 14954 15014 17628 16528 # contigs (>= 25000 bp) 8920 8932 5978 5831 # contigs (>= 50000 bp) 4189 4183 1730 1692 Total length (>= 0 bp) 727715067 727685487 535240614 499544163 Total length (>= 1000 bp) 727715067 727685487 535240614 499544163 Total length (>= 5000 bp) 727315859 727299109 519148360 487783161 Total length (>= 10000 bp) 721126393 721013281 473940178 452883249 Total length (>= 25000 bp) 615942404 614978295 288903896 281063789 Total length (>= 50000 bp) 448643326 447074102 144150039 140200475 # contigs 15828 15901 26375 23146 Largest contig 1047284 1032518 446867 433224 Total length 727692787 727685487 529765198 495546873 Estimated reference length 818000000 818000000 818000000 818000000 GC (%) 34.17 34.17 34.05 33.86 N50 67531 67255 27740 29034 NG50 57730 57442 14584 13592 N75 34358 34162 15477 16521 NG75 25283 25182 - - L50 2729 2746 5068 4592 LG50 3452 3474 12288 12805 L75 6531 6569 11510 10312 LG75 8823 8874 - - # N's per 100 kbp 1.00 0.00 0.00 0.00 Complete BUSCO (%) 89.11 89.11 86.80 85.81 Partial BUSCO (%) 0.99 0.99 2.31 2.97 # predicted genes (unique) 133689 134059 114356 107071 # predicted genes (>= 0 bp) 1084337 + 0 part 1085337 + 0 part 841573 + 0 part 777387 + 0 part # predicted genes (>= 300 bp) 174807 + 0 part 174910 + 0 part 135704 + 0 part 124050 + 0 part # predicted genes (>= 1500 bp) 18997 + 0 part 19007 + 0 part 14001 + 0 part 12347 + 0 part # predicted genes (>= 3000 bp) 3913 + 0 part 3914 + 0 part 4386 + 0 part 3552 + 0 part