FastQCFastQC Report
Wed 8 Jan 2025
SRR2125763.clean.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2125763.clean.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21252475
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length20-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCGAATCGCCACTTCTCTTATCTGGTGGGCTCTGCCCGCCCTTGTCGG2049110.9641747608219748No Hit
ATCTCGAATCGCCACTTCTCTTATCTGGTGGGCTCTGCCCGCCCTTGTCG1853790.8722701708859791No Hit
ACGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGC1210790.5697171741173676No Hit
GACCAATACTAATTGCTCGTGAGGCTTGACT1021520.48065931144490226No Hit
TCGGGAGTTCGAATCTCTCTGAGCGCACCA948930.44650328961685637No Hit
CGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCG822210.38687729311527247No Hit
CACGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCG810670.38144733731012503No Hit
AACCACGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGG637310.299875661540597No Hit
ACAATGTCGCTCCCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCACG635750.299141629386695No Hit
CCACGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTC632070.29741006635697725No Hit
ACCACGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGT610610.28731241890650383No Hit
AGTGGACTGCCATGGCGTTGACGGGAGCGGGGGATTAGGGTTCGATTCCG532470.2505449365309217No Hit
CCCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCACGTAGACCCACTT517290.24340223903333613No Hit
TGAAAAGGGGCAACAGAGAACCTGGGATGATATTCCAAAAAGAAATTGCA508400.23921919682295825No Hit
ATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCAAC502920.23664067361566124No Hit
AATGTCGCTCCCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCACGTA485900.2286321946032168No Hit
CGGGAGTTCGAATCTCTCTGAGCGCACCA469150.22075075961740928No Hit
AGACGTGTTGACTCAATTCATTCCGTGCGAAAGCCGAGCCTTGTTGCTCG465060.2188262778805763No Hit
ACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCAACGAG431490.203030470568722No Hit
AATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCAA412100.19390682732246478No Hit
CACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCAACGA400770.188575683538035No Hit
TCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCAACG398180.18735700194918473No Hit
TTGATAGGTTGGATGTGGAAGCATAGTGATATGTGAAGCTGACCAATACT375660.1767605890608035No Hit
AGTGCATGGTTGTTTTCAATGGGGGATACTCAAACCCATCCAATATCGAG360160.1694673208649816No Hit
CACAATGTCGCTCCCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCAC341010.16045660564240166No Hit
TGCTGGCGACAATAGCAAGAGTGAACCACCTGATCCCTTCCCGAACTCAG331790.1561182873994676No Hit
AAAAGAGCGGGGAAACCACGGAATCACGTAGACCCACTTGGGACCGAGTA331050.15577009265979608No Hit
CCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCACGTAGACCCACTTG328870.15474432977806116No Hit
ACGCACTTGTCGTGGCGATGGGACGTCCAGCGAATGAATGAAATTAGAAC327980.15432555502359138No Hit
CAATGTCGCTCCCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCACGT327570.15413263631647608No Hit
ATGTCGCTCCCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCACGTAG327340.15402441362711874No Hit
GTCGGGAGTTCGAATCTCTCTGAGCGCACCA318900.1500531114611357No Hit
AAACCACGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTG306090.1440255781973629No Hit
CTCCCGCTTGATCAAAAGAGCGGGGAAACCACGGAATCACGTAGACCCAC297630.1400448653627401No Hit
ACCAATACTAATTGCTCGTGAGGCTTGACT292410.13758868084776008No Hit
GTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCAACGAGGA285310.13424789348064167No Hit
GTGGAGTTATCCATGTGAGAGTAAGTCATCGCCAGCTC271420.12771218411032126No Hit
CTTGATCAAAAGAGCGGGGAAACCACGGAATCACGTAGACCCACTTGGGA264640.12452196744143919No Hit
GAATCACGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCA252500.11880969157709867No Hit
CGTAGACCCACTTGGGACCGAGTATTGCAATTATTGGTCGCGCAACGAGG252480.11880028090845889No Hit
TAGTGATATGTGAAGCTGACCAATACTAATTGCTCGTGAGGCTTGACT247730.11656524710651348No Hit
AATACTAATTGCTCGTGAGGCTTGACT247290.11635821239643852No Hit
AGGGGCAACAGAGAACCTGGGATGATATTCCAAAAAGAAATTGCATGTGG242610.11415611593473231No Hit
ACGGAATCACGTAGACCCACTTGGGACCGAGTATTGCAATT240190.11301742502932012No Hit
AGAGACCATTGTAGTCCACACTGCAAACCATGACACCCATGAATTGGGGA233670.10994954705275503No Hit
CGGACGTGTTTTGACCCACGCCCTCGTGGCCCGTGAACACACTCAGATAC220760.10387496044578337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)