FastQCFastQC Report
Wed 8 Jan 2025
SRR2125767.clean.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2125767.clean.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38753905
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length20-51
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATTGAGGATTGTTTAAAATTGAATAAAAAGGCTTTT2913880.7518932608210708No Hit
TTATTGAGGATTGTTTAAAATTGAAT1591460.4106579711128466No Hit
ATCCTTCTCTCCGTTTCTCCTTTTCTCTCTTTCTCCCTT1151870.2972268214003208No Hit
ATCCTTCTCTCCGTTTCTCCTTTTCTCTCTTTCTCCCTTT1053840.27193130601935467No Hit
AATATCGAGTAACATTTGGAGGAC924930.23866756137220238No Hit
AATATCGAGTAACAGTTGGAGGAC714440.1843530348748081No Hit
ATCGAGTAACATTTGGAGGAC597270.15411866236447655No Hit
AGTGCATGGTTGTTTTCAATGGGGGATACTCAAACCCATCCAATATCGAG565790.14599560999078676No Hit
TTATTGAGGATTGTTTAAAATTGAATAAAAAGGCTTTTTGGAAGGGGATT486820.12561830865818555No Hit
ATCGAGTAACAGTTGGAGGAC446950.11533031316457014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)